Query 005041
Match_columns 717
No_of_seqs 385 out of 2313
Neff 7.9
Searched_HMMs 46136
Date Thu Mar 28 17:05:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005041.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/005041hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02418 delta-1-pyrroline-5-c 100.0 2E-124 4E-129 1089.4 76.0 711 1-717 1-718 (718)
2 TIGR01092 P5CS delta l-pyrroli 100.0 2E-121 4E-126 1067.2 74.4 700 12-716 3-711 (715)
3 PRK00197 proA gamma-glutamyl p 100.0 1.3E-84 2.7E-89 719.3 43.9 407 293-700 4-416 (417)
4 cd07079 ALDH_F18-19_ProA-GPR G 100.0 3.2E-83 7E-88 705.7 42.0 398 297-695 2-405 (406)
5 KOG2450 Aldehyde dehydrogenase 100.0 1.5E-82 3.3E-87 676.0 30.0 400 270-698 41-498 (501)
6 KOG2451 Aldehyde dehydrogenase 100.0 6.3E-82 1.4E-86 640.6 31.8 399 269-696 43-499 (503)
7 COG1012 PutA NAD-dependent ald 100.0 4E-79 8.6E-84 680.7 39.3 396 270-696 19-469 (472)
8 TIGR00407 proA gamma-glutamyl 100.0 2.9E-78 6.3E-83 660.8 38.9 388 302-690 1-398 (398)
9 PRK11241 gabD succinate-semial 100.0 1.3E-77 2.7E-82 674.0 40.6 397 270-695 31-481 (482)
10 PLN02419 methylmalonate-semial 100.0 1.7E-77 3.6E-82 678.3 39.8 399 270-696 134-590 (604)
11 PLN02174 aldehyde dehydrogenas 100.0 9.6E-77 2.1E-81 661.9 40.5 386 292-696 9-445 (484)
12 TIGR03374 ABALDH 1-pyrroline d 100.0 3.5E-76 7.6E-81 661.8 39.6 398 269-694 20-471 (472)
13 PLN02315 aldehyde dehydrogenas 100.0 1.4E-75 3E-80 660.1 39.6 403 269-696 38-495 (508)
14 PLN02766 coniferyl-aldehyde de 100.0 1.7E-75 3.8E-80 660.2 38.9 399 269-696 40-495 (501)
15 PRK13968 putative succinate se 100.0 4.2E-75 9.2E-80 652.0 39.5 395 270-695 12-460 (462)
16 PRK09406 gabD1 succinic semial 100.0 7E-75 1.5E-79 649.4 40.6 398 270-694 6-456 (457)
17 PLN02278 succinic semialdehyde 100.0 8.4E-75 1.8E-79 654.8 40.9 398 269-695 44-495 (498)
18 cd07130 ALDH_F7_AASADH NAD+-de 100.0 7.1E-75 1.5E-79 653.2 39.7 402 269-695 16-472 (474)
19 cd07113 ALDH_PADH_NahF Escheri 100.0 8.9E-75 1.9E-79 653.4 39.8 401 269-695 19-476 (477)
20 PLN02466 aldehyde dehydrogenas 100.0 7.7E-75 1.7E-79 657.5 38.8 398 270-696 78-532 (538)
21 cd07559 ALDH_ACDHII_AcoD-like 100.0 1.5E-74 3.2E-79 651.1 39.4 398 269-695 20-479 (480)
22 cd07086 ALDH_F7_AASADH-like NA 100.0 2.2E-74 4.7E-79 650.4 40.7 402 269-695 17-476 (478)
23 cd07117 ALDH_StaphAldA1 Unchar 100.0 2.6E-74 5.6E-79 647.8 40.2 398 269-695 20-474 (475)
24 cd07116 ALDH_ACDHII-AcoD Ralst 100.0 3.4E-74 7.3E-79 649.0 40.8 397 269-695 20-478 (479)
25 TIGR03216 OH_muco_semi_DH 2-hy 100.0 3.1E-74 6.8E-79 649.6 39.8 401 269-695 18-480 (481)
26 PRK13252 betaine aldehyde dehy 100.0 3.6E-74 7.8E-79 650.2 40.3 399 269-696 26-481 (488)
27 cd07140 ALDH_F1L_FTFDH 10-form 100.0 3.3E-74 7.2E-79 647.5 39.6 401 269-695 25-485 (486)
28 cd07142 ALDH_F2BC Arabidosis a 100.0 3.3E-74 7.2E-79 648.6 38.2 396 269-693 23-475 (476)
29 cd07107 ALDH_PhdK-like Nocardi 100.0 7.4E-74 1.6E-78 643.2 40.9 396 270-695 2-455 (456)
30 cd07148 ALDH_RL0313 Uncharacte 100.0 1.2E-73 2.6E-78 640.6 39.7 401 270-694 4-455 (455)
31 cd07085 ALDH_F6_MMSDH Methylma 100.0 1.3E-73 2.9E-78 644.4 40.2 400 269-695 20-477 (478)
32 TIGR01780 SSADH succinate-semi 100.0 9.8E-74 2.1E-78 640.5 37.8 392 270-690 2-448 (448)
33 cd07106 ALDH_AldA-AAD23400 Str 100.0 2.3E-73 5E-78 637.9 40.8 393 270-693 2-445 (446)
34 TIGR02299 HpaE 5-carboxymethyl 100.0 1.7E-73 3.7E-78 645.1 40.0 397 269-696 20-478 (488)
35 PRK13473 gamma-aminobutyraldeh 100.0 1.6E-73 3.5E-78 643.7 39.4 401 268-696 20-474 (475)
36 PTZ00381 aldehyde dehydrogenas 100.0 2.1E-73 4.5E-78 640.2 39.1 386 292-696 6-439 (493)
37 PLN02467 betaine aldehyde dehy 100.0 2.2E-73 4.7E-78 642.8 39.1 400 270-696 28-489 (503)
38 cd07090 ALDH_F9_TMBADH NAD+-de 100.0 2.6E-73 5.6E-78 639.4 39.1 397 270-696 2-456 (457)
39 cd07151 ALDH_HBenzADH NADP+-de 100.0 3.9E-73 8.5E-78 638.5 40.5 397 270-695 15-464 (465)
40 cd07143 ALDH_AldA_AN0554 Asper 100.0 6E-73 1.3E-77 637.7 39.2 397 270-695 27-480 (481)
41 cd07144 ALDH_ALD2-YMR170C Sacc 100.0 7.4E-73 1.6E-77 639.3 40.0 397 270-695 28-483 (484)
42 cd07110 ALDH_F10_BADH Arabidop 100.0 8.7E-73 1.9E-77 634.9 39.6 395 270-693 2-455 (456)
43 cd07152 ALDH_BenzADH NAD-depen 100.0 1.1E-72 2.4E-77 631.9 40.3 391 275-694 1-443 (443)
44 cd07097 ALDH_KGSADH-YcbD Bacil 100.0 1.2E-72 2.7E-77 635.8 39.8 399 268-694 17-473 (473)
45 cd07145 ALDH_LactADH_F420-Bios 100.0 1.3E-72 2.9E-77 633.4 40.0 398 270-694 4-456 (456)
46 PLN00412 NADP-dependent glycer 100.0 1.6E-72 3.5E-77 635.9 40.8 404 268-696 34-488 (496)
47 cd07147 ALDH_F21_RNP123 Aldehy 100.0 1.3E-72 2.8E-77 633.1 39.7 398 270-694 4-452 (452)
48 PLN02203 aldehyde dehydrogenas 100.0 2.1E-72 4.5E-77 629.3 40.9 387 292-697 5-445 (484)
49 cd07120 ALDH_PsfA-ACA09737 Pse 100.0 8.5E-73 1.8E-77 632.2 37.7 394 271-694 3-455 (455)
50 cd07101 ALDH_SSADH2_GabD2 Myco 100.0 1.4E-72 3.1E-77 632.5 39.5 395 271-694 2-454 (454)
51 cd07115 ALDH_HMSADH_HapE Pseud 100.0 1.7E-72 3.6E-77 632.1 39.6 396 271-695 3-452 (453)
52 cd07109 ALDH_AAS00426 Uncharac 100.0 1.6E-72 3.5E-77 632.4 39.4 393 271-693 3-453 (454)
53 cd07141 ALDH_F1AB_F2_RALDH1 NA 100.0 1.7E-72 3.6E-77 635.5 38.9 396 270-694 27-480 (481)
54 cd07089 ALDH_CddD-AldA-like Rh 100.0 2.8E-72 6E-77 630.2 39.5 398 271-694 3-459 (459)
55 cd07150 ALDH_VaniDH_like Pseud 100.0 2.7E-72 5.8E-77 630.7 39.3 396 270-694 4-451 (451)
56 cd07094 ALDH_F21_LactADH-like 100.0 4.2E-72 9.2E-77 629.2 40.6 398 270-694 4-453 (453)
57 TIGR01804 BADH glycine betaine 100.0 1.7E-72 3.7E-77 634.0 37.6 392 270-690 18-467 (467)
58 cd07124 ALDH_PutA-P5CDH-RocA D 100.0 5.1E-72 1.1E-76 635.3 41.4 427 240-695 13-511 (512)
59 cd07118 ALDH_SNDH Gluconobacte 100.0 2.6E-72 5.7E-77 629.5 37.8 394 271-693 3-453 (454)
60 cd07119 ALDH_BADH-GbsA Bacillu 100.0 3.1E-72 6.8E-77 634.3 38.7 398 269-696 17-474 (482)
61 TIGR01237 D1pyr5carbox2 delta- 100.0 6.4E-72 1.4E-76 633.8 40.5 398 270-695 51-510 (511)
62 cd07091 ALDH_F1-2_Ald2-like AL 100.0 4.4E-72 9.5E-77 632.2 38.4 397 269-694 23-476 (476)
63 TIGR03250 PhnAcAld_DH putative 100.0 8.9E-72 1.9E-76 627.3 39.7 397 270-695 22-471 (472)
64 PRK03137 1-pyrroline-5-carboxy 100.0 1.5E-71 3.1E-76 631.3 41.2 398 268-694 53-512 (514)
65 cd07083 ALDH_P5CDH ALDH subfam 100.0 1.8E-71 4E-76 629.0 41.7 399 269-694 36-498 (500)
66 cd07123 ALDH_F4-17_P5CDH Delta 100.0 1.1E-71 2.3E-76 632.4 39.8 400 268-695 49-519 (522)
67 cd07098 ALDH_F15-22 Aldehyde d 100.0 1.4E-71 3E-76 626.7 40.3 403 271-695 2-464 (465)
68 TIGR01236 D1pyr5carbox1 delta- 100.0 1.1E-71 2.3E-76 631.9 39.5 400 269-696 50-521 (533)
69 cd07125 ALDH_PutA-P5CDH Delta( 100.0 1.4E-71 3.1E-76 632.0 40.6 423 245-696 19-508 (518)
70 PRK09847 gamma-glutamyl-gamma- 100.0 8.4E-72 1.8E-76 629.8 38.2 398 269-695 39-492 (494)
71 cd07088 ALDH_LactADH-AldA Esch 100.0 1.4E-71 2.9E-76 627.6 39.7 396 269-693 17-467 (468)
72 cd07138 ALDH_CddD_SSP0762 Rhod 100.0 1.5E-71 3.3E-76 626.1 39.4 392 269-693 18-465 (466)
73 cd07131 ALDH_AldH-CAJ73105 Unc 100.0 2.7E-71 5.8E-76 626.4 41.1 398 270-695 19-476 (478)
74 cd07108 ALDH_MGR_2402 Magnetos 100.0 1.8E-71 4E-76 624.4 39.4 395 271-694 3-457 (457)
75 cd07100 ALDH_SSADH1_GabD1 Myco 100.0 1.7E-71 3.8E-76 619.0 38.6 374 295-693 1-428 (429)
76 PRK09457 astD succinylglutamic 100.0 2.8E-71 6E-76 625.6 40.7 397 269-696 19-471 (487)
77 cd07102 ALDH_EDX86601 Uncharac 100.0 2.3E-71 5E-76 623.4 39.6 395 271-693 2-451 (452)
78 PRK09407 gabD2 succinic semial 100.0 3E-71 6.4E-76 629.6 40.4 397 271-696 38-492 (524)
79 cd07139 ALDH_AldA-Rv0768 Mycob 100.0 1.9E-71 4E-76 626.6 37.2 394 270-693 19-470 (471)
80 cd07136 ALDH_YwdH-P39616 Bacil 100.0 3E-71 6.5E-76 615.9 38.2 379 297-696 2-428 (449)
81 TIGR03240 arg_catab_astD succi 100.0 5.6E-71 1.2E-75 623.1 40.6 396 270-696 18-469 (484)
82 cd07092 ALDH_ABALDH-YdcW Esche 100.0 4.6E-71 9.9E-76 620.6 39.5 396 270-693 2-449 (450)
83 cd07099 ALDH_DDALDH Methylomon 100.0 5.5E-71 1.2E-75 620.5 39.9 395 271-693 2-452 (453)
84 cd07112 ALDH_GABALDH-PuuC Esch 100.0 3E-71 6.6E-76 622.3 37.5 396 270-694 7-462 (462)
85 TIGR01722 MMSDH methylmalonic 100.0 7.3E-71 1.6E-75 621.6 40.6 399 269-695 20-476 (477)
86 cd07111 ALDH_F16 Aldehyde dehy 100.0 3.8E-71 8.2E-76 621.8 37.0 385 269-691 41-477 (480)
87 cd07121 ALDH_EutE Ethanolamine 100.0 4.7E-71 1E-75 611.6 35.3 372 292-694 3-422 (429)
88 cd07135 ALDH_F14-YMR110C Sacch 100.0 1.3E-70 2.8E-75 611.0 38.1 383 292-693 4-435 (436)
89 cd07137 ALDH_F3FHI Plant aldeh 100.0 1.4E-70 3E-75 610.1 38.1 375 297-694 3-432 (432)
90 cd07105 ALDH_SaliADH Salicylal 100.0 1.6E-70 3.5E-75 612.1 38.7 378 294-694 1-432 (432)
91 cd07146 ALDH_PhpJ Streptomyces 100.0 1.9E-70 4.2E-75 613.5 39.2 396 270-694 4-451 (451)
92 cd07114 ALDH_DhaS Uncharacteri 100.0 1.4E-70 3E-75 617.3 37.9 396 270-694 2-457 (457)
93 PF00171 Aldedh: Aldehyde dehy 100.0 3.7E-71 8E-76 622.7 33.2 393 270-692 12-462 (462)
94 cd07132 ALDH_F3AB Aldehyde deh 100.0 2.9E-70 6.2E-75 609.9 39.1 381 297-697 2-429 (443)
95 cd07133 ALDH_CALDH_CalB Conife 100.0 3.1E-70 6.8E-75 608.5 38.4 376 298-693 3-433 (434)
96 cd07149 ALDH_y4uC Uncharacteri 100.0 5.4E-70 1.2E-74 612.9 40.5 397 270-693 4-452 (453)
97 PRK15398 aldehyde dehydrogenas 100.0 2.7E-70 5.9E-75 610.1 36.6 377 292-696 35-454 (465)
98 cd07126 ALDH_F12_P5CDH Delta(1 100.0 6.6E-70 1.4E-74 608.5 39.2 380 269-672 16-470 (489)
99 cd07095 ALDH_SGSD_AstD N-succi 100.0 4.4E-70 9.5E-75 606.8 36.4 374 294-692 1-429 (431)
100 cd07093 ALDH_F8_HMSADH Human a 100.0 9.1E-70 2E-74 610.9 39.0 395 271-694 3-455 (455)
101 TIGR01238 D1pyr5carbox3 delta- 100.0 6.7E-70 1.5E-74 613.4 37.2 407 245-691 24-500 (500)
102 cd07082 ALDH_F11_NP-GAPDH NADP 100.0 1.5E-69 3.3E-74 611.3 40.1 399 269-694 20-472 (473)
103 cd07103 ALDH_F5_SSADH_GabD Mit 100.0 1.7E-69 3.6E-74 608.4 39.0 395 270-693 2-450 (451)
104 KOG2456 Aldehyde dehydrogenase 100.0 4E-70 8.7E-75 559.9 30.8 383 294-696 3-433 (477)
105 cd07104 ALDH_BenzADH-like ALDH 100.0 3.6E-69 7.7E-74 602.5 39.1 378 294-694 1-431 (431)
106 cd07128 ALDH_MaoC-N N-terminal 100.0 1.5E-69 3.2E-74 610.4 35.8 392 269-693 19-502 (513)
107 TIGR02278 PaaN-DH phenylacetic 100.0 3.2E-69 6.9E-74 624.0 38.5 396 269-695 19-496 (663)
108 cd07081 ALDH_F20_ACDH_EutE-lik 100.0 8.1E-69 1.7E-73 593.5 38.0 381 295-694 1-438 (439)
109 PRK11904 bifunctional proline 100.0 1.5E-68 3.4E-73 638.5 41.9 428 242-696 536-1027(1038)
110 PRK11903 aldehyde dehydrogenas 100.0 2E-68 4.3E-73 603.0 37.2 395 270-694 24-506 (521)
111 PRK10090 aldehyde dehydrogenas 100.0 3.1E-68 6.6E-73 586.2 34.2 353 321-696 1-408 (409)
112 cd07087 ALDH_F3-13-14_CALDH-li 100.0 8.3E-68 1.8E-72 588.6 38.0 376 297-693 2-425 (426)
113 TIGR02518 EutH_ACDH acetaldehy 100.0 2.1E-67 4.6E-72 590.2 41.1 384 292-698 7-447 (488)
114 cd07134 ALDH_AlkH-like Pseudom 100.0 1E-67 2.2E-72 588.2 38.1 378 297-693 2-432 (433)
115 PRK11563 bifunctional aldehyde 100.0 6.1E-68 1.3E-72 617.4 36.5 396 269-695 23-508 (675)
116 cd07077 ALDH-like NAD(P)+-depe 100.0 1.9E-66 4.1E-71 572.9 40.5 382 300-693 1-396 (397)
117 cd07129 ALDH_KGSADH Alpha-Keto 100.0 9E-67 1.9E-71 584.0 36.4 380 295-689 1-449 (454)
118 cd07122 ALDH_F20_ACDH Coenzyme 100.0 1.2E-66 2.7E-71 575.0 36.6 376 295-694 1-435 (436)
119 PRK11809 putA trifunctional tr 100.0 1.6E-66 3.4E-71 625.6 36.9 385 268-691 662-1111(1318)
120 PRK11905 bifunctional proline 100.0 7.8E-66 1.7E-70 621.7 39.8 389 269-696 571-1019(1208)
121 cd07084 ALDH_KGSADH-like ALDH 100.0 1.1E-65 2.4E-70 572.8 37.0 375 296-692 2-440 (442)
122 TIGR02288 PaaN_2 phenylacetic 100.0 2.5E-65 5.4E-70 575.3 37.6 366 270-656 70-516 (551)
123 PRK13805 bifunctional acetalde 100.0 2.8E-64 6.1E-69 602.4 39.2 385 292-699 11-454 (862)
124 KOG2454 Betaine aldehyde dehyd 100.0 4.8E-64 1E-68 508.9 22.5 419 270-709 69-547 (583)
125 cd07127 ALDH_PAD-PaaZ Phenylac 100.0 1.4E-61 3.1E-66 546.3 36.9 405 270-694 70-545 (549)
126 cd07078 ALDH NAD(P)+ dependent 100.0 1E-60 2.2E-65 535.0 38.3 375 296-693 1-431 (432)
127 cd06534 ALDH-SF NAD(P)+-depend 100.0 4.6E-59 9.9E-64 510.5 35.6 355 301-693 2-366 (367)
128 COG0014 ProA Gamma-glutamyl ph 100.0 8.6E-58 1.9E-62 473.6 35.2 408 293-701 3-417 (417)
129 KOG2452 Formyltetrahydrofolate 100.0 6.5E-57 1.4E-61 465.8 23.7 379 271-695 443-880 (881)
130 COG4230 Delta 1-pyrroline-5-ca 100.0 1.1E-54 2.4E-59 459.1 25.0 388 265-692 127-575 (769)
131 KOG4165 Gamma-glutamyl phospha 100.0 2.3E-49 5E-54 395.7 34.0 422 295-716 2-429 (433)
132 KOG2453 Aldehyde dehydrogenase 100.0 7.1E-51 1.5E-55 406.3 16.2 410 271-705 39-503 (507)
133 KOG2455 Delta-1-pyrroline-5-ca 100.0 2.5E-45 5.3E-50 378.9 23.4 380 292-692 95-544 (561)
134 COG0263 ProB Glutamate 5-kinas 100.0 1.2E-42 2.5E-47 356.7 25.3 256 13-285 3-260 (369)
135 KOG1154 Gamma-glutamyl kinase 100.0 9.3E-42 2E-46 327.8 21.3 274 10-287 3-278 (285)
136 cd04256 AAK_P5CS_ProBA AAK_P5C 100.0 6E-41 1.3E-45 350.2 26.7 270 12-282 4-283 (284)
137 PRK12314 gamma-glutamyl kinase 100.0 3E-40 6.5E-45 343.0 25.2 260 10-285 3-265 (266)
138 PRK13402 gamma-glutamyl kinase 100.0 4.2E-39 9.1E-44 346.0 24.3 254 13-285 2-258 (368)
139 PTZ00489 glutamate 5-kinase; P 100.0 5.2E-38 1.1E-42 323.7 25.5 252 11-285 3-260 (264)
140 PRK05429 gamma-glutamyl kinase 100.0 5E-38 1.1E-42 341.0 24.2 258 10-285 2-262 (372)
141 cd04242 AAK_G5K_ProB AAK_G5K_P 100.0 1E-37 2.3E-42 322.7 24.5 247 18-282 1-250 (251)
142 TIGR01027 proB glutamate 5-kin 100.0 1.9E-37 4.1E-42 335.1 24.5 252 17-285 1-254 (363)
143 COG0548 ArgB Acetylglutamate k 100.0 1.9E-34 4.2E-39 291.4 20.6 241 16-283 2-264 (265)
144 cd04241 AAK_FomA-like AAK_FomA 100.0 3.3E-32 7.2E-37 282.4 20.0 243 18-282 1-252 (252)
145 PRK12353 putative amino acid k 100.0 5E-31 1.1E-35 279.1 22.8 256 15-283 1-313 (314)
146 cd04237 AAK_NAGS-ABP AAK_NAGS- 100.0 7.2E-31 1.6E-35 274.8 22.7 242 16-282 18-280 (280)
147 CHL00202 argB acetylglutamate 100.0 1.1E-30 2.3E-35 274.3 21.8 242 16-283 23-283 (284)
148 cd07080 ALDH_Acyl-CoA-Red_LuxC 100.0 1.9E-30 4.1E-35 287.7 24.2 315 294-645 25-388 (422)
149 TIGR00746 arcC carbamate kinas 100.0 2.2E-30 4.9E-35 271.7 22.9 243 17-283 1-309 (310)
150 PLN02512 acetylglutamate kinas 100.0 6.4E-30 1.4E-34 271.1 24.8 244 16-283 47-308 (309)
151 COG1608 Predicted archaeal kin 100.0 4.7E-30 1E-34 250.7 21.2 240 19-283 3-251 (252)
152 PRK14058 acetylglutamate/acety 100.0 7.4E-30 1.6E-34 266.3 20.8 236 18-284 1-267 (268)
153 PRK00942 acetylglutamate kinas 100.0 6.9E-30 1.5E-34 269.1 20.2 240 16-284 23-282 (283)
154 PRK12352 putative carbamate ki 100.0 3.7E-29 7.9E-34 262.9 24.6 257 16-284 2-315 (316)
155 cd04250 AAK_NAGK-C AAK_NAGK-C: 100.0 1.9E-29 4.1E-34 265.1 21.3 241 16-282 14-279 (279)
156 PRK05279 N-acetylglutamate syn 100.0 2.5E-29 5.3E-34 281.3 22.7 241 16-285 25-292 (441)
157 TIGR01890 N-Ac-Glu-synth amino 100.0 1.2E-28 2.6E-33 274.5 24.1 239 16-285 17-280 (429)
158 cd02115 AAK Amino Acid Kinases 100.0 2.4E-29 5.3E-34 260.6 15.0 239 20-282 1-248 (248)
159 cd04236 AAK_NAGS-Urea AAK_NAGS 100.0 9E-29 2E-33 254.8 17.6 221 16-281 35-270 (271)
160 PRK12686 carbamate kinase; Rev 100.0 3.6E-28 7.9E-33 253.4 22.2 256 15-283 1-311 (312)
161 cd04252 AAK_NAGK-fArgBP AAK_NA 100.0 2.1E-28 4.6E-33 252.3 19.5 229 19-282 1-248 (248)
162 PRK12454 carbamate kinase-like 100.0 1.5E-27 3.2E-32 248.2 23.8 251 16-283 2-312 (313)
163 cd04239 AAK_UMPK-like AAK_UMPK 100.0 9.9E-28 2.1E-32 245.1 20.3 227 18-282 1-228 (229)
164 cd04251 AAK_NAGK-UC AAK_NAGK-U 100.0 2.7E-28 5.8E-33 252.9 15.8 222 19-281 1-256 (257)
165 cd04238 AAK_NAGK-like AAK_NAGK 100.0 6.2E-28 1.3E-32 250.8 18.5 234 19-282 1-256 (256)
166 PRK00358 pyrH uridylate kinase 100.0 2.1E-27 4.6E-32 243.1 22.1 227 17-282 1-230 (231)
167 cd04249 AAK_NAGK-NC AAK_NAGK-N 100.0 9.1E-28 2E-32 248.9 19.4 236 19-282 1-252 (252)
168 cd04234 AAK_AK AAK_AK: Amino A 100.0 1.3E-27 2.8E-32 243.6 20.2 208 18-267 1-220 (227)
169 cd04246 AAK_AK-DapG-like AAK_A 100.0 1.5E-27 3.2E-32 245.5 20.4 222 18-267 1-233 (239)
170 TIGR00761 argB acetylglutamate 100.0 1.6E-27 3.5E-32 244.0 18.8 213 18-260 1-231 (231)
171 PRK14558 pyrH uridylate kinase 100.0 4.5E-27 9.8E-32 240.4 22.0 223 17-284 1-230 (231)
172 cd04261 AAK_AKii-LysC-BS AAK_A 100.0 3.8E-27 8.2E-32 242.3 21.4 222 18-267 1-233 (239)
173 cd04235 AAK_CK AAK_CK: Carbama 100.0 4.2E-27 9.2E-32 245.4 21.4 251 18-282 1-307 (308)
174 PLN02825 amino-acid N-acetyltr 100.0 3.9E-27 8.5E-32 262.0 21.3 247 16-285 17-365 (515)
175 cd04255 AAK_UMPK-MosAB AAK_UMP 100.0 4.9E-27 1.1E-31 242.5 20.2 228 17-282 31-261 (262)
176 cd04260 AAK_AKi-DapG-BS AAK_AK 99.9 4.4E-27 9.5E-32 242.2 19.4 221 18-266 1-237 (244)
177 PF00696 AA_kinase: Amino acid 99.9 3.7E-27 7.9E-32 243.4 15.8 229 17-262 1-242 (242)
178 TIGR02075 pyrH_bact uridylate 99.9 9.2E-26 2E-30 230.8 22.8 228 16-282 1-232 (233)
179 cd04254 AAK_UMPK-PyrH-Ec UMP k 99.9 5.3E-26 1.1E-30 232.4 20.4 228 17-282 1-230 (231)
180 PRK04531 acetylglutamate kinas 99.9 6.8E-26 1.5E-30 246.4 21.3 212 15-285 35-250 (398)
181 PRK08841 aspartate kinase; Val 99.9 1.1E-25 2.4E-30 245.8 23.0 222 17-266 2-234 (392)
182 PRK12354 carbamate kinase; Rev 99.9 1.8E-25 3.9E-30 232.1 21.4 245 18-285 2-301 (307)
183 PRK14557 pyrH uridylate kinase 99.9 5.6E-25 1.2E-29 225.3 22.6 234 13-285 1-239 (247)
184 TIGR00656 asp_kin_monofn aspar 99.9 4E-25 8.6E-30 244.8 20.4 230 18-285 2-244 (401)
185 TIGR02076 pyrH_arch uridylate 99.9 7.3E-25 1.6E-29 222.8 20.1 218 19-282 1-220 (221)
186 PRK14556 pyrH uridylate kinase 99.9 1.3E-24 2.9E-29 219.8 21.5 234 11-283 10-247 (249)
187 PRK08210 aspartate kinase I; R 99.9 5.5E-25 1.2E-29 243.4 20.4 231 17-285 2-248 (403)
188 PRK06635 aspartate kinase; Rev 99.9 1.1E-24 2.4E-29 241.5 21.4 231 17-285 2-243 (404)
189 cd04253 AAK_UMPK-PyrH-Pf AAK_U 99.9 1.6E-24 3.6E-29 220.0 20.1 217 18-282 1-220 (221)
190 PRK09411 carbamate kinase; Rev 99.9 4.9E-24 1.1E-28 219.3 22.0 242 17-283 2-296 (297)
191 COG0528 PyrH Uridylate kinase 99.9 6.9E-24 1.5E-28 208.1 21.0 231 14-283 3-237 (238)
192 COG0527 LysC Aspartokinases [A 99.9 1.3E-23 2.7E-28 231.3 21.6 238 18-285 3-290 (447)
193 PRK07431 aspartate kinase; Pro 99.9 1.6E-23 3.5E-28 242.2 22.4 233 17-285 2-245 (587)
194 COG0549 ArcC Carbamate kinase 99.9 1.3E-21 2.9E-26 195.3 23.5 255 17-283 1-311 (312)
195 PRK08373 aspartate kinase; Val 99.9 3.5E-22 7.6E-27 212.6 20.2 226 15-266 2-271 (341)
196 TIGR00657 asp_kinases aspartat 99.9 2.9E-22 6.3E-27 224.2 19.9 238 18-285 2-284 (441)
197 cd04244 AAK_AK-LysC-like AAK_A 99.9 7E-22 1.5E-26 208.4 20.7 228 18-267 1-291 (298)
198 cd04259 AAK_AK-DapDC AAK_AK-Da 99.9 3.2E-21 6.9E-26 202.5 19.7 229 18-267 1-288 (295)
199 TIGR02078 AspKin_pair Pyrococc 99.9 2.2E-21 4.7E-26 205.4 17.1 223 18-266 1-262 (327)
200 cd04245 AAK_AKiii-YclM-BS AAK_ 99.9 8.2E-21 1.8E-25 198.3 20.7 225 19-267 2-281 (288)
201 cd04257 AAK_AK-HSDH AAK_AK-HSD 99.9 5.5E-21 1.2E-25 200.8 19.2 227 19-267 2-287 (294)
202 PRK06291 aspartate kinase; Pro 99.9 8.8E-21 1.9E-25 212.9 21.4 238 18-285 2-304 (465)
203 cd04243 AAK_AK-HSDH-like AAK_A 99.9 1.4E-20 3.1E-25 197.7 20.6 227 18-267 1-286 (293)
204 PRK09084 aspartate kinase III; 99.9 1.7E-20 3.8E-25 209.0 19.6 234 18-285 1-290 (448)
205 PRK05925 aspartate kinase; Pro 99.8 6.5E-20 1.4E-24 202.7 19.0 235 17-285 2-281 (440)
206 cd04258 AAK_AKiii-LysC-EC AAK_ 99.8 1.2E-19 2.6E-24 189.9 19.8 225 18-267 1-285 (292)
207 PRK09034 aspartate kinase; Rev 99.8 2.8E-19 6E-24 199.9 20.3 235 18-285 1-290 (454)
208 cd04247 AAK_AK-Hom3 AAK_AK-Hom 99.8 4.1E-19 8.8E-24 186.7 19.1 235 18-284 2-305 (306)
209 PLN02551 aspartokinase 99.8 5.7E-19 1.2E-23 198.6 21.1 239 16-285 51-349 (521)
210 cd04240 AAK_UC AAK_UC: Unchara 99.8 1.2E-18 2.6E-23 174.1 15.5 201 20-282 1-203 (203)
211 PRK09466 metL bifunctional asp 99.8 1.3E-18 2.8E-23 205.1 18.0 239 13-284 7-300 (810)
212 PRK08961 bifunctional aspartat 99.8 2.8E-18 6.1E-23 206.0 17.8 239 16-284 7-305 (861)
213 PRK09436 thrA bifunctional asp 99.8 8E-18 1.7E-22 199.9 18.4 236 19-285 2-298 (819)
214 PRK09181 aspartate kinase; Val 99.6 1.4E-15 3E-20 169.8 15.1 162 95-285 140-312 (475)
215 cd04248 AAK_AK-Ectoine AAK_AK- 99.6 5.5E-15 1.2E-19 153.4 17.1 152 96-267 135-297 (304)
216 KOG0456 Aspartate kinase [Amin 99.5 3E-13 6.5E-18 139.7 13.2 237 18-285 80-376 (559)
217 COG2054 Uncharacterized archae 99.4 9E-12 1.9E-16 116.8 16.5 98 173-285 112-211 (212)
218 KOG2436 Acetylglutamate kinase 99.4 1.1E-12 2.5E-17 140.9 11.6 227 40-285 111-360 (520)
219 PF05893 LuxC: Acyl-CoA reduct 99.3 1.8E-09 3.8E-14 118.9 28.9 244 398-646 81-368 (399)
220 KOG2449 Methylmalonate semiald 98.8 2.2E-09 4.8E-14 96.2 2.5 68 588-655 76-143 (157)
221 PF07368 DUF1487: Protein of u 98.5 1.1E-06 2.4E-11 86.7 10.9 172 517-697 8-212 (215)
222 PRK11905 bifunctional proline 97.9 4E-05 8.6E-10 95.1 10.1 103 393-512 1067-1175(1208)
223 PF00815 Histidinol_dh: Histid 96.4 0.96 2.1E-05 49.8 23.3 283 365-694 69-378 (412)
224 cd06572 Histidinol_dh Histidin 96.2 2 4.3E-05 47.1 24.3 251 365-655 56-326 (390)
225 PRK00877 hisD bifunctional his 95.8 3.5 7.5E-05 45.7 24.3 248 365-655 84-353 (425)
226 TIGR00069 hisD histidinol dehy 95.6 1.6 3.5E-05 47.6 20.7 247 365-655 52-322 (393)
227 PLN02926 histidinol dehydrogen 95.6 3.6 7.9E-05 45.5 23.3 248 365-654 83-355 (431)
228 PRK13770 histidinol dehydrogen 95.6 4.3 9.3E-05 44.7 23.6 243 365-655 76-343 (416)
229 PRK12447 histidinol dehydrogen 95.4 5.2 0.00011 44.3 23.7 249 365-654 77-347 (426)
230 COG0141 HisD Histidinol dehydr 94.7 1.8 3.9E-05 47.4 17.4 250 365-655 80-349 (425)
231 PRK13769 histidinol dehydrogen 86.1 57 0.0012 35.6 26.9 238 365-654 58-303 (368)
232 COG1778 Low specificity phosph 85.9 2.9 6.3E-05 39.6 7.1 71 195-284 10-80 (170)
233 PRK11809 putA trifunctional tr 82.8 2.9 6.2E-05 53.1 7.5 93 394-502 1177-1269(1318)
234 TIGR02726 phenyl_P_delta pheny 48.4 35 0.00076 33.1 5.4 64 195-279 9-74 (169)
235 PF10686 DUF2493: Protein of u 41.5 62 0.0014 26.5 5.0 44 17-69 3-47 (71)
236 PF13376 OmdA: Bacteriocin-pro 39.6 41 0.0009 26.7 3.6 35 292-326 7-41 (63)
237 PF03437 BtpA: BtpA family; I 35.6 98 0.0021 32.2 6.6 99 176-285 123-233 (254)
238 cd01390 HMGB-UBF_HMG-box HMGB- 35.6 86 0.0019 24.5 5.0 35 300-334 30-64 (66)
239 PF09011 HMG_box_2: HMG-box do 33.9 1.1E+02 0.0023 24.9 5.4 35 299-333 33-67 (73)
240 COG0647 NagD Predicted sugar p 32.5 6.1E+02 0.013 26.6 12.0 50 10-65 2-51 (269)
241 PF06945 DUF1289: Protein of u 31.7 52 0.0011 25.1 2.9 21 308-328 29-49 (51)
242 TIGR01689 EcbF-BcbF capsule bi 31.7 82 0.0018 29.0 4.7 48 17-65 2-50 (126)
243 PF00505 HMG_box: HMG (high mo 31.0 1.1E+02 0.0023 24.2 4.9 36 301-336 31-66 (69)
244 smart00398 HMG high mobility g 29.9 1.4E+02 0.003 23.4 5.4 35 301-335 32-66 (70)
245 PRK10513 sugar phosphate phosp 28.2 94 0.002 32.1 5.2 45 16-65 3-47 (270)
246 PTZ00174 phosphomannomutase; P 27.7 1.1E+02 0.0024 31.3 5.6 44 16-64 5-48 (247)
247 PRK01158 phosphoglycolate phos 27.3 1.1E+02 0.0023 30.7 5.3 45 16-65 3-47 (230)
248 cd01388 SOX-TCF_HMG-box SOX-TC 27.1 1.4E+02 0.0031 24.1 5.0 34 300-333 31-64 (72)
249 PRK15126 thiamin pyrimidine py 27.0 1.1E+02 0.0024 31.6 5.5 45 16-65 2-46 (272)
250 PRK10530 pyridoxal phosphate ( 26.1 1.2E+02 0.0026 31.1 5.6 43 16-63 3-45 (272)
251 PRK10976 putative hydrolase; P 25.7 1.2E+02 0.0026 31.3 5.4 45 16-65 2-46 (266)
252 PF07045 DUF1330: Protein of u 24.7 1E+02 0.0022 24.6 3.6 55 558-622 5-61 (65)
253 COG1576 Uncharacterized conser 22.9 2.7E+02 0.0058 26.6 6.5 46 18-73 70-115 (155)
254 PLN02645 phosphoglycolate phos 22.7 1.4E+02 0.0031 31.8 5.4 53 7-65 19-71 (311)
255 PHA03398 viral phosphatase sup 22.3 2.1E+02 0.0046 30.4 6.3 47 16-65 128-175 (303)
256 TIGR00246 tRNA_RlmH_YbeA rRNA 21.4 2.3E+02 0.005 27.0 5.9 45 18-72 68-112 (153)
257 cd00084 HMG-box High Mobility 21.4 2.5E+02 0.0054 21.6 5.3 33 300-332 30-62 (66)
258 TIGR01684 viral_ppase viral ph 21.0 2.5E+02 0.0055 29.8 6.6 51 15-68 125-176 (301)
259 PRK09875 putative hydrolase; P 21.0 9.5E+02 0.021 25.4 11.1 72 111-200 170-244 (292)
260 COG0561 Cof Predicted hydrolas 20.6 1.6E+02 0.0035 30.3 5.1 46 15-65 2-47 (264)
No 1
>PLN02418 delta-1-pyrroline-5-carboxylate synthase
Probab=100.00 E-value=1.9e-124 Score=1089.41 Aligned_cols=711 Identities=84% Similarity=1.232 Sum_probs=617.5
Q ss_pred ChhhhhhHhHHhhccCCeEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChhHhhHHHHhhhhccCC
Q 005041 1 MMESFQDHTRDFLKNVKRVVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNS 80 (717)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~iVvKiGGs~l~~~~~~~~~~~l~~l~~~Ia~l~~~G~~vviVhGGg~~~~~~~l~~~~~~~~ 80 (717)
|||.--. .|+.|++++++|+||||+++.+.+++++.+.+.+++++|+.+++.|+++|||.||+...|..+++..+....
T Consensus 1 ~~~~~~~-~~~~~~~~~~iViK~G~ssl~~~~~~~~~~~i~~l~~~i~~l~~~g~~vvlVsSga~~~g~~~l~~~~~~~~ 79 (718)
T PLN02418 1 MMEEEDR-SRAFLRDVKRVVIKVGTAVVTRDDGRLALGRLGALCEQIKELNSDGYEVILVSSGAVGVGRQRLRYRRLVNS 79 (718)
T ss_pred CCccccc-hhhHHhhCCEEEEEeCCCeecCCCCCccHHHHHHHHHHHHHHHHCCCEEEEEecchHHHHHHHHhhhhhhhc
Confidence 6775433 445477789999999999999988899999999999999999999999999999999999987765432211
Q ss_pred CcccccCccccchHHHHHHhchHHHHHHHHHHhhcCCCCcceeEecccccCchhHhhHHHHHHHHHHhCCCeEEecCCCe
Q 005041 81 SLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDA 160 (717)
Q Consensus 81 ~~~~l~~~~~~l~~~~~~a~G~~~~~~~~~~~l~~~g~~~~~~~~~~~d~~~~~~~~~~~~~i~~lL~~g~vPVv~g~d~ 160 (717)
.+.++......+.+++++++||..++.+|+..|..+|++++|+++|++||.++..+.+..+.|+.+|+.|+|||+++||.
T Consensus 80 ~~~~~~~~~~~~~~qa~aa~Gq~~l~~~~~~~f~~~g~~~~qillT~~~~~~~~~~~~~~~~l~~ll~~g~iPVv~~nd~ 159 (718)
T PLN02418 80 SFADLQKPQMELDGKACAAVGQSELMALYDTLFSQLDVTASQLLVTDSDFRDPDFRKQLSETVESLLDLRVIPIFNENDA 159 (718)
T ss_pred ccccCCCCcchHHHHHHHHhhHHHHHHHHHHHHHHcCCeEEEEEecHhHhcchhHhHhHHHHHHHHHHCCCEEEEcCCCC
Confidence 11111111123455789999999999999999999999999999999999888888888899999999999999999998
Q ss_pred eeccCCCCCCCCCeeecchHHHHHHHhhcCCCEEEEecccCccccCCCccccccccccccccchhHHHhcCCCCCcccCC
Q 005041 161 VSTRKAPYEDSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGG 240 (717)
Q Consensus 161 v~~~~~~~~~~~~~~~~sD~~A~~lA~~L~Ad~li~lTDV~GV~~~dP~~p~a~~i~~it~~e~~~~~~~gs~~~~~tgg 240 (717)
+.+...++.+....++++|++|+.+|.+++||+|+|+|||||||++||++|++++|++++..+....+..++.+.+++||
T Consensus 160 v~~~~~~~~~~~~~~~d~D~~A~~lA~~l~Ad~li~~TdVdGvy~~~p~~~~a~~i~~i~~~~~~~~i~~~~~s~~~tGG 239 (718)
T PLN02418 160 VSTRRAPYEDSSGIFWDNDSLAALLALELKADLLILLSDVEGLYTGPPSDPSSKLIHTYIKEKHQDEITFGEKSRVGRGG 239 (718)
T ss_pred ccccccccccccCeecCcHHHHHHHHHHcCCCEEEEeecCCeeecCCCCCCCceEcceecccchhhhhhcccccccCCCC
Confidence 88643211111224588999999999999999999999999999999988999999999887765445555556688999
Q ss_pred hHHHHHHHHHHHHcCCcEEEEeCCCcchHHHHhcCCcceEEEecCCcccccH--hhHHHHHHHHHHHHHHHhcCCHHHHH
Q 005041 241 MTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRDAHLWVKQ--VGAREMAVAARESSRRLQALQSQDRR 318 (717)
Q Consensus 241 M~~Kv~aa~~a~~~gi~v~I~~g~~~~~l~~~~tg~~iGT~i~a~~~~~~~~--~~v~~av~~A~~A~~~w~~~~~~~R~ 318 (717)
|.+|+++|..+.++|++++|+||+.++.+.+.+.|+..||++.++.|.|... +++++++++|++||+.|+++|..+|.
T Consensus 240 M~~Kl~Aa~~a~~~Gi~v~I~~g~~~~~l~~~l~g~~~GT~i~~~~~~~~~~~~~~~~~~~~aA~~A~~~W~~~~~~eR~ 319 (718)
T PLN02418 240 MTAKVKAAVNAASAGIPVVITSGYALDNIRKVLRGERVGTLFHQDAHLWAPSKEVGAREMAVAARESSRKLQALSSEERK 319 (718)
T ss_pred cHHHHHHHHHHHHCCCcEEEeCCCCcchHHHHhcCCCCceEeccccchhhhccHHHHHHHHHHHHHHHHHHHhCCHHHHH
Confidence 9999999999999999999999999999999999999999999998988632 46999999999999999999999999
Q ss_pred HHHHHHHHHHHHCHHHHHHHHHHHHHHHHhhchhHHHHHHhhcChhHHHHHHHHHHHHhcccccccccccccccCCCceE
Q 005041 319 KILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRILADMEEPIGQILKRTELADGLIL 398 (717)
Q Consensus 319 ~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~g~~~a~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (717)
++|++++++|++|.++|++++++|++..+|+|+++.+.+.+..+..|+..++..+++++...++.|+..+......+...
T Consensus 320 ~~L~~~a~~l~~~~~ela~~~~~d~~~~~E~G~~k~~~~~~~~~~~ev~~~~~~~~~~a~~~~~~g~~~~~~~~~~~~~~ 399 (718)
T PLN02418 320 KILLDVADALEANEELIKAENELDVAAAQEAGYEKSLVSRLTLKPGKIASLAASIRQLADMEDPIGRVLKRTEVADGLVL 399 (718)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHhHHHHHHhCCchhHHHHHhccHHHHHHHHHHHHHHhcCccccCccccccccCCCceE
Confidence 99999999999999999999988888888888555444433344568999999999999876566654331111234446
Q ss_pred EEeecceeEEEEEcCCCchhHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccccCcCc----eEEecCCChh
Q 005041 399 EKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDTVGEKL----IGLVTSREEI 474 (717)
Q Consensus 399 ~~~~~PlGVV~~I~p~~P~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~~~~~al~~alP~gv----v~vv~~~~~~ 474 (717)
+++|+|+|||++|+||||..++++++|||++||+||+||||.||+|+.++++++++ +||+|+ +|+|+|++++
T Consensus 400 ~~~r~PlGVV~~I~PwnP~~~~~kiapALaaGNtVVlKPse~tp~s~~~l~~l~~e----AlP~gv~~~v~nvv~g~~~~ 475 (718)
T PLN02418 400 EKTSCPLGVLLIIFESRPDALVQIASLAIRSGNGLLLKGGKEAARSNAILHKVITD----AIPKTVGGKLIGLVTSRDEI 475 (718)
T ss_pred EEEEEeeeEEEEEeCCCcHHHHHHHHHHHHhCCEEEEeCCccchHHHHHHHHHHHH----HccccCCcceEEEeCCcHHH
Confidence 78899999999999999976569999999999999999999999999999999987 488885 9999976678
Q ss_pred hhhhcCCCCccEEEeecCHHHHHHHHhhcCCCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCccccccceEEEcCc
Q 005041 475 PDLLKLDDVIDLVIPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKD 554 (717)
Q Consensus 475 ~~~l~~~~~v~~v~fTGs~~~g~~i~~~a~~p~~lElGGk~p~iV~~dADl~~A~~~i~~~~~~n~g~C~a~~rv~V~~~ 554 (717)
+++|..||+||+|+||||++.++.+++.+.||++||||||||+||++|||+|.|++.+++|+|.|+|+|+|++|+|||++
T Consensus 476 g~~L~~~~~v~~V~FTGSt~~i~~~aa~~~k~v~lELGGk~p~iV~~DADld~A~~~i~~~~~~nGQ~C~a~~RllVh~~ 555 (718)
T PLN02418 476 PDLLKLDDVIDLVIPRGSNKLVSQIKASTKIPVLGHADGICHVYVDKSADMDMAKRIVVDAKTDYPAACNAMETLLVHKD 555 (718)
T ss_pred HHHHhhCCCCCEEEEeCCHHHHHHHHHhcCCCEEEeCCCcceEEEeCCCCHHHHHHHHHHHhCCCCCccccCcEEEEecc
Confidence 89999999999999999999999998877899999999999999999999999999999999999669999999999999
Q ss_pred ccChh-hHHHHHHHHHHcCceEecCccccccccCCCCccccccccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEecCH
Q 005041 555 LACNG-ALNELVVELQHEGVGLFGGPRASKLLQIPETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQ 633 (717)
Q Consensus 555 i~d~~-f~~~l~~~~~~~~~~~~g~~~~~~~~pi~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~I~t~d~ 633 (717)
|| |+ .+..+++.+.+.|+++.|+++..+++++++|++|+||+||||++|++|+|+||||+++|+++|||++||||+|.
T Consensus 556 i~-d~G~~~~~i~~a~~~Ga~l~Gg~~~~g~l~~~~~~i~~eE~FgPv~~i~~~~~~dEAI~~aN~s~yGLsa~V~T~d~ 634 (718)
T PLN02418 556 LV-QNGGLNDLLVALRSAGVTLYGGPRASKLLNIPEAQSFHHEYSSLACTVEIVDDVHAAIDHIHRHGSAHTDCIVTEDS 634 (718)
T ss_pred cc-ccccHHHHHHHHHHCCCEEECCccccCeeCCCCchhhhCCcCCeeEEEEEECCHHHHHHHHhcCCCCCeeEEEcCCH
Confidence 99 68 77888899899999888775433444335689999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCeeeEEEcCCCCCCCCCccCCccccccccCcccccccchhhcccEEEEEEecCceeecCCCCceeeeccc
Q 005041 634 KVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHVVDGDQGVVYTHKNL 713 (717)
Q Consensus 634 ~~a~~~~~~l~~G~v~iN~~~~~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v~~~~~~~~~~~~~~~~~~~~~ 713 (717)
+++++|++++++|+||||+++.+.+..||||+++||+|+|+.+++|++|+++||+.|+|.++.++.|+++++.+|+|+.|
T Consensus 635 ~~a~~~a~~l~aG~V~IN~~~~~~~~~PfGG~k~SG~stGr~~~~G~~gl~~~t~~K~v~~g~g~~~~~~~~~~~~~~~~ 714 (718)
T PLN02418 635 EVAEIFLRQVDSAAVFHNASTRFSDGARFGLGAEVGISTGRIHARGPVGVEGLLTTRWILRGNGQVVDGDKGVVYTHKDL 714 (718)
T ss_pred HHHHHHHHhCCeeEEEEeCCCCCCCCCCCCCcccccccCCcCCCCCHHHHHHHhcEEEEEECCCeecCCCCCcccccccc
Confidence 99999999999999999998776677899999999997767666799999999999999999999999999999999999
Q ss_pred cCCC
Q 005041 714 ALQS 717 (717)
Q Consensus 714 ~~~~ 717 (717)
||||
T Consensus 715 ~~~~ 718 (718)
T PLN02418 715 PLQS 718 (718)
T ss_pred cCCC
Confidence 9997
No 2
>TIGR01092 P5CS delta l-pyrroline-5-carboxylate synthetase. This protein contains a glutamate 5-kinase (ProB, EC 2.7.2.11) region followed by a gamma-glutamyl phosphate reductase (ProA, EC 1.2.1.41) region.
Probab=100.00 E-value=1.8e-121 Score=1067.20 Aligned_cols=700 Identities=75% Similarity=1.106 Sum_probs=614.2
Q ss_pred hhccCCeEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChhHhhHHHHhhhhccCCCcccccCcccc
Q 005041 12 FLKNVKRVVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNE 91 (717)
Q Consensus 12 ~~~~~~~iVvKiGGs~l~~~~~~~~~~~l~~l~~~Ia~l~~~G~~vviVhGGg~~~~~~~l~~~~~~~~~~~~l~~~~~~ 91 (717)
+|+..+++|||+|||+++++++.++.+.+.+++++|+.|++.|+++|||.||+.++|+..+++++.....+.++......
T Consensus 3 ~~~~~~~iViKiGss~lt~~~~~~~~~~l~~l~~~i~~l~~~g~~vilVsSGA~a~G~~~~~~~~~~~~~~~~~~~~~~~ 82 (715)
T TIGR01092 3 FLKDVKRIVVKVGTAVVTRGDGRLALGRLGSICEQLSELNSDGREVILVTSGAVAFGRQRLRHRILVNSSFADLQKPQPE 82 (715)
T ss_pred hhhcCCEEEEEeCcceeECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEccchHHhchHHhccchhccccccccCCCCch
Confidence 45567899999999999999888999999999999999999999999999999999998876553322222233333345
Q ss_pred chHHHHHHhchHHHHHHHHHHhhcCCCCcceeEecccccCchhHhhHHHHHHHHHHhCCCeEEecCCCeeeccCCCCCCC
Q 005041 92 LDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDS 171 (717)
Q Consensus 92 l~~~~~~a~G~~~~~~~~~~~l~~~g~~~~~~~~~~~d~~~~~~~~~~~~~i~~lL~~g~vPVv~g~d~v~~~~~~~~~~ 171 (717)
+.+++++++||..++.+|+..|..+++.++|+++|++||.++..+.+..++++.+|+.|+|||+++||.+.+.+.++++.
T Consensus 83 ~~~qa~aa~gq~~L~~~y~~~f~~~~i~~aQ~Llt~~d~~~~~~~~~~~~~l~~lL~~g~iPVin~nD~V~~~~~~~~~~ 162 (715)
T TIGR01092 83 LDGKACAAVGQSGLMALYETMFTQLDITAAQILVTDLDFRDEQFRRQLNETVHELLRMNVVPVVNENDAVSTRAAPYSDS 162 (715)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCeeEEEEechhhcccHHHHHHHHHHHHHHHHCCCEEEEcCCCcccccccccccc
Confidence 67889999999999999999999999999999999999999988888889999999999999999999999865443323
Q ss_pred CCeeecchHHHHHHHhhcCCCEEEEecccCccccCCCccccccccccccccchhHHHhcCCCCCcccCChHHHHHHHHHH
Q 005041 172 SGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCA 251 (717)
Q Consensus 172 ~~~~~~sD~~A~~lA~~L~Ad~li~lTDV~GV~~~dP~~p~a~~i~~it~~e~~~~~~~gs~~~~~tggM~~Kv~aa~~a 251 (717)
.+.++|+|++|+.+|.+|+||+|+|+|||||||++||++|++++|++++.++....+..++.+.+++|||.+|+++|..+
T Consensus 163 ~g~~~d~D~lAa~lA~~l~Ad~LiilTDVdGVy~~dP~~~~a~~I~~i~~~~~~~~i~~~~~~~~~tGGM~~Kl~aa~~a 242 (715)
T TIGR01092 163 QGIFWDNDSLAALLALELKADLLILLSDVEGLYDGPPSDDDSKLIDTFYKEKHQGEITFGTKSRLGRGGMTAKVKAAVWA 242 (715)
T ss_pred cceecchHHHHHHHHHHcCCCEEEEEeCCCeeeCCCCCCCCCeEeeeecccchhhhhccCcccccCCCCchHHHHHHHHH
Confidence 34479999999999999999999999999999999998899999999998766644555555668899999999999999
Q ss_pred HHcCCcEEEEeCCCcchHHHHhcCCcceEEEecCCcccccH--hhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Q 005041 252 ACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRDAHLWVKQ--VGAREMAVAARESSRRLQALQSQDRRKILLDVADALE 329 (717)
Q Consensus 252 ~~~gi~v~I~~g~~~~~l~~~~tg~~iGT~i~a~~~~~~~~--~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~ 329 (717)
.++|++++|+||+.++.+.+.+.|+..||++..+.|-|... +++++.+++|++||++|+++|.++|.++|++++++|+
T Consensus 243 ~~~gi~v~I~~g~~~~~l~~~l~g~~~GT~~~~~~~~~~~~~~~~~~~~~~~A~~A~~~w~~~~~~~R~~~L~~la~~l~ 322 (715)
T TIGR01092 243 AYGGTPVIIASGTAPKNITKVVEGKKVGTLFHEDAHLWPTVEQTGERDMAVAARESSRMLQALSSEQRKEILHDIADALE 322 (715)
T ss_pred HHCCCeEEEeCCCCcchHHHHhcCCCCceEecccchhhhhhhHHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999998999998876655211 3589999999999999999999999999999999999
Q ss_pred HCHHHHHHHHHHHHHHHHhhchhHHHHHHhhcChhHHHHHHHHHHHHhcccccccccccccccCCCceEEEeecceeEEE
Q 005041 330 ANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLL 409 (717)
Q Consensus 330 ~~~~el~~~~~~d~~~~~~~g~~~a~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~ 409 (717)
+|+++|++++.+|+..+++.+..+.++.++..+..++..+++.+++|++..++.|...+......+...+++|+|+|||+
T Consensus 323 ~~~eei~~e~gkdl~~a~~~~~~~~~~~el~~~~~ei~~~~~~l~~~a~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVV~ 402 (715)
T TIGR01092 323 DNEDEILAENKKDVAAAQGAGYAASLVARLSMSPSKISSLAISLRQLAAMEDPIGRVLKRTRIADNLILEKTSVPIGVLL 402 (715)
T ss_pred HHHHHHHHHHhhhHHHHHhcCcchhHHHHHhCCHHHHHHHHHHHHHHhcCCCcccccccccccCCCceeEEEEeeceEEE
Confidence 99999999999999877766666777888889999999999999999975455555432111122344577899999999
Q ss_pred EEcCCCchhHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccccCcC----ceEEecCCChhhhhhcCCCCcc
Q 005041 410 IVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDTVGEK----LIGLVTSREEIPDLLKLDDVID 485 (717)
Q Consensus 410 ~I~p~~P~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~~~~~al~~alP~g----vv~vv~~~~~~~~~l~~~~~v~ 485 (717)
+|+||+|..++++++|||+|||+||+||||.||+|+.++++++++ +||+| ++|+|+++++++++|..||+||
T Consensus 403 ~I~PwNP~~~~~~~~~ALaaGN~vvlKpse~tp~t~~~l~~l~~~----alp~g~~~~~~~~v~~~~~~~~~l~~~~~vd 478 (715)
T TIGR01092 403 IVFESRPDALVQIASLAIRSGNGLLLKGGKEAARSNAILHKVITE----AIPIHVGKKLIGLVTSREEIPDLLKLDDVID 478 (715)
T ss_pred EEeCCChHHHHHHHHHHHHhCCEEEEcCcccchHHHHHHHHHHHH----HcCCCCCCcEEEEeCChHHHHHHHhcCCCcc
Confidence 999999876679999999999999999999999999999999997 46765 7899986667889999999999
Q ss_pred EEEeecCHHHHHHHHhhcCCCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCccccccceEEEcCcccChh-hHHHH
Q 005041 486 LVIPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNG-ALNEL 564 (717)
Q Consensus 486 ~v~fTGs~~~g~~i~~~a~~p~~lElGGk~p~iV~~dADl~~A~~~i~~~~~~n~g~C~a~~rv~V~~~i~d~~-f~~~l 564 (717)
+|+||||+++||.|++.|.||+++|||||||+||++|||++.|++.+++++|.|+|+|+|++|+|||+++| |+ +++++
T Consensus 479 ~I~fTGS~~vG~~i~~~A~~pv~lElgGk~p~iV~~dADl~~A~~~i~~~~~~~GQ~C~a~~rvlV~~~i~-d~~~~~~~ 557 (715)
T TIGR01092 479 LVIPRGSNKLVSQIKKSTKIPVLGHADGICHVYVDKSASVDMAKRIVRDAKCDYPAACNAMETLLVHKDLL-RNGLLDDL 557 (715)
T ss_pred EEEEcCCHHHHHHHHHhCCCCEEEEcCCcceEEECCCCCHHHHHHHHHHHhCCCCCccccCcEEEEehhhc-cchhHHHH
Confidence 99999999999999988889999999999999999999999999888888887766999999999999999 66 77888
Q ss_pred HHHHHHcCceEecCccccccccC--CCCccccccccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEecCHHHHHHHHhc
Q 005041 565 VVELQHEGVGLFGGPRASKLLQI--PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQ 642 (717)
Q Consensus 565 ~~~~~~~~~~~~g~~~~~~~~pi--~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~ 642 (717)
++.+.+.|++++|+.+...++++ ++|++|+||+||||++|++|+|+||||+++|+++|||++||||+|.+++++|+++
T Consensus 558 v~~~~~~Ga~l~Gg~~~~~~~~~~~~~~~i~~eE~FGPvl~v~~~~~~deAi~~~N~~~~gLa~~ift~d~~~a~~~~~~ 637 (715)
T TIGR01092 558 IDMLRTEGVTIHGGPRFAAYLTFNISETKSFRTEYSSLACTVEIVDDVYDAIDHIHKHGSAHTDCIVTEDENVAEFFLQH 637 (715)
T ss_pred HHHHHHCCCEEECCcchhheeccCCCCchhhhccccCceEEEEEECCHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHHHh
Confidence 88888888888877543334432 4689999999999999999999999999999999999999999999999999999
Q ss_pred CCeeeEEEcCCCCCCCCCccCCccccccccCcccccccchhhcccEEEEEEecCceeecCCCCceeeeccccCC
Q 005041 643 VDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHVVDGDQGVVYTHKNLALQ 716 (717)
Q Consensus 643 l~~G~v~iN~~~~~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v~~~~~~~~~~~~~~~~~~~~~~~~ 716 (717)
+++|.|+||+++...+..||||+++||+|+++.|++|++|+++||+.|+|.++.++.|+++++.+|+|+.||+.
T Consensus 638 i~sG~V~vN~~~~~~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~v~~g~g~~~~~~~~~~~~~~~~~~~ 711 (715)
T TIGR01092 638 VDSAAVFHNASTRFSDGFRFGLGAEVGISTSRIHARGPVGVEGLLTTRWLLRGKGQVVSGDHGLVYTHKDLPIP 711 (715)
T ss_pred CCeeEEEEeCCCCCCCCCCCcCccccccccCCCCCCChhHHHHhceEEEEEECCCeecCCCCCcceecccCCcc
Confidence 99999999998766677899999999999766667899999999999999999999999999999999999873
No 3
>PRK00197 proA gamma-glutamyl phosphate reductase; Provisional
Probab=100.00 E-value=1.3e-84 Score=719.28 Aligned_cols=407 Identities=42% Similarity=0.719 Sum_probs=370.3
Q ss_pred hhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhhchhHHHHHHhhcChhHHHHHHHH
Q 005041 293 VGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKS 372 (717)
Q Consensus 293 ~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~g~~~a~~~~~~~~~~~i~~~~~~ 372 (717)
+|+++++++|++||+.|+++|..+|.++|++++++|++|+++|++++++|+++++++|+.++..+++..+..++..+++.
T Consensus 4 ~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~g~~~~~g~~~~~~~~~~~~~~ev~~~~~~ 83 (417)
T PRK00197 4 EYLEELGRRAKAASRKLAQLSTAQKNRALLAIADALEANAAEILAANAKDLAAARANGLSAAMLDRLLLTEARIEGIAEG 83 (417)
T ss_pred hHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCHHHHHHhcCCHHHHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999998888887777788888899999999
Q ss_pred HHHHhcccccccccccccccCCCceEEEeecceeEEEEEcCCCchhHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHH
Q 005041 373 IRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVI 452 (717)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~~P~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~~~ 452 (717)
+++++..++..+...+....+.+...+++|+|+|||++|+||||.+++++++|||+|||+||+||||.||+|+.++++++
T Consensus 84 ~~~~a~~~~~~g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~p~~~~~~~~~~ALaaGN~vVlKPs~~tp~t~~~l~~l~ 163 (417)
T PRK00197 84 LRQVAALPDPVGEVLDGWTLPNGLRIGRVRVPLGVIGVIYESRPNVTVDAAALCLKSGNAVILRGGSEAIHSNRALVAVI 163 (417)
T ss_pred HHHHhhcCCCccccccceecCCCceEEEEecCceEEEEEcCCCchHHHHHHHHHHHhCCeEEEecChhhhHHHHHHHHHH
Confidence 99998766555543322111223356889999999999999988888899999999999999999999999999999999
Q ss_pred HHhcccc-cCcCceEEecC-C-ChhhhhhcCCCCccEEEeecCHHHHHHHHhhcCCCEEEecCCcceEEEcCCCCHHHHH
Q 005041 453 TSAIPDT-VGEKLIGLVTS-R-EEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAK 529 (717)
Q Consensus 453 ~~al~~a-lP~gvv~vv~~-~-~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a~~p~~lElGGk~p~iV~~dADl~~A~ 529 (717)
.++++++ +|+|++|+|++ + ++++++|..||+||+|+||||+++|+.|++.+.||+++|||||||+||++|||+|.|+
T Consensus 164 ~~~l~~aGlP~gv~~~v~g~~~~~~~~~l~~~~~v~~V~fTGS~~~g~~i~~~a~~~~~lELGGk~p~IV~~dAdl~~Aa 243 (417)
T PRK00197 164 QEALEEAGLPADAVQLVETTDRAAVGELLKLDGYVDVIIPRGGAGLIRRVVENATVPVIEHGDGICHIYVDESADLDKAL 243 (417)
T ss_pred HHHHHHcCcChhhEEEecCCChHHHHHHhccCCCccEEEecCCHHHHHHHHHhcCCCEEeecCCcceEEEeCCCCHHHHH
Confidence 9888889 99999999994 4 4578999999999999999999999999988899999999999999999999999999
Q ss_pred HHHHhhccCCCccccccceEEEcCcccChhhHHHHHHHHHHcCceEecCcccccccc-C--CCCccccccccCceEEEEE
Q 005041 530 NIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLQ-I--PETRLFHHEYNSMVCTVEI 606 (717)
Q Consensus 530 ~~i~~~~~~n~g~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~~~~g~~~~~~~~p-i--~~~~~~~eE~FGPVl~v~~ 606 (717)
+.+++|+|.|+|+|+|++|+|||++|| |+|+++|+++++++++++.|++...+++| | ++|++++||+||||++|++
T Consensus 244 ~~iv~~~~~n~G~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~~~~~~~~~~~~~PTi~~~~~~i~~eE~FGPVl~v~~ 322 (417)
T PRK00197 244 KIVLNAKTQRPSVCNALETLLVHEAIA-EEFLPKLAEALAEAGVELRGDEAALALLPDVVPATEEDWDTEYLDLILAVKV 322 (417)
T ss_pred HHHHHhccCCCcccccceEEEEEHHHh-HHHHHHHHHHHHHCCCeEecCHHHHHhhcccccCCcchhhhhhhCceEEEEE
Confidence 999999999988999999999999999 89999999999999988776654334668 4 5789999999999999999
Q ss_pred eCCHHHHHHHHHhcCCCceeEEEecCHHHHHHHHhcCCeeeEEEcCCCCCCCCCccCCccccccccCcccccccchhhcc
Q 005041 607 VDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGL 686 (717)
Q Consensus 607 ~~~~deAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~f 686 (717)
|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+++...+..|||++++||+|.++.+++|++|+++|
T Consensus 323 ~~~~deAi~~aN~~~~GL~a~V~t~d~~~~~~~~~~l~~G~v~VN~~~~~~~~~p~G~~~~sG~g~~~~~~~g~~~l~~~ 402 (417)
T PRK00197 323 VDSLDEAIAHINRYGSGHTEAIVTEDYAAAERFLNEVDSAAVYVNASTRFTDGGEFGLGAEIGISTQKLHARGPMGLEEL 402 (417)
T ss_pred eCCHHHHHHHHHhcCCCCceEEEeCCHHHHHHHHHhCCeeEEEEeCCCccCCCCccccchhheeecCCCcCCCccchHhh
Confidence 99999999999999999999999999999999999999999999998776677899999999998666778899999999
Q ss_pred cEEEEEEecCceee
Q 005041 687 LTTRWILRGNGHVV 700 (717)
Q Consensus 687 t~~k~v~~~~~~~~ 700 (717)
|++|+++++.++.|
T Consensus 403 ~~~k~v~~~~~~~~ 416 (417)
T PRK00197 403 TTYKYIVLGDGQIR 416 (417)
T ss_pred cEEEEEEECCCeeC
Confidence 99999999888765
No 4
>cd07079 ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate reductase (GPR), aldehyde dehydrogenase families 18 and 19. Gamma-glutamyl phosphate reductase (GPR), a L-proline biosynthetic pathway (PBP) enzyme that catalyzes the NADPH dependent reduction of L-gamma-glutamyl 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The glutamate route of the PBP involves two enzymatic steps catalyzed by gamma-glutamyl kinase (GK, EC 2.7.2.11) and GPR (EC 1.2.1.41). These enzymes are fused into the bifunctional enzyme, ProA or delta(1)-pyrroline-5-carboxylate synthetase (P5CS) in plants and animals, whereas they are separate enzymes in bacteria and yeast. In humans, the P5CS (ALDH18A1), an inner mitochondrial membrane enzyme, is essential to the de novo synthesis of the amino acids proline and arginine. Tomato (Lycopersicon esculentum) has both the prokaryotic-like polycistronic operons encoding GK and GPR (PRO1, ALDH19) and the full-length, bifunctional P5CS (PRO2, ALDH18B1).
Probab=100.00 E-value=3.2e-83 Score=705.74 Aligned_cols=398 Identities=45% Similarity=0.760 Sum_probs=358.9
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhhchhHHHHHHhhcChhHHHHHHHHHHHH
Q 005041 297 EMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRIL 376 (717)
Q Consensus 297 ~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~g~~~a~~~~~~~~~~~i~~~~~~~~~~ 376 (717)
+.+++|++||+.|+++|.++|.++|++++++|++|+++|++++++|+++++++|+.+++.+++..+..+++.+++.+++|
T Consensus 2 ~~~~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~gk~~e~G~~~a~~~~l~~~~~ev~~~~~~~~~~ 81 (406)
T cd07079 2 ELAKRAKAASRALATLSTEQKNAALLAIADALEANRDEILEANAKDLAAAREAGLSEALLDRLLLTPERIEAMAEGLRQV 81 (406)
T ss_pred hHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhchHHHHHHhhhhHHHHHHcCCCHHHHhHhcCCHHHHHHHHHHHHHH
Confidence 47889999999999999999999999999999999999999999999999998888777778888888999999999999
Q ss_pred hcccccccccccccccCCCceEEEeecceeEEEEEcCCCchhHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhc
Q 005041 377 ADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAI 456 (717)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~~P~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~~~~~al 456 (717)
+...+..|...+....+.+...+++|+|+|||++|+||||.+++++++|||+|||+||+||||.||+|+..++++++++|
T Consensus 82 a~~~~~~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~~p~~~~~~~~~ALaaGN~vVlKps~~tp~~~~~l~~~~~~~l 161 (406)
T cd07079 82 AALPDPVGEVLRGWTLPNGLQIEKVRVPLGVIGIIYESRPNVTVDAAALCLKSGNAVILRGGSEALHSNRALVEIIQEAL 161 (406)
T ss_pred HhcCCCCcccccceeccCccceeEEecceEEEEEecCCCcchHHHHHHHHHHhCCEEEEeCCchhhhHHHHHHHHHHHHH
Confidence 87655444433221112234567889999999999999888888999999999999999999999999999999999888
Q ss_pred ccc-cCcCceEEecC-C-ChhhhhhcCCCCccEEEeecCHHHHHHHHhhcCCCEEEecCCcceEEEcCCCCHHHHHHHHH
Q 005041 457 PDT-VGEKLIGLVTS-R-EEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVI 533 (717)
Q Consensus 457 ~~a-lP~gvv~vv~~-~-~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a~~p~~lElGGk~p~iV~~dADl~~A~~~i~ 533 (717)
.++ +|+|++|+|++ + ++++++|.+||+||+|+||||+++|++|++++.+|+++|||||||+||++|||+|.|++.++
T Consensus 162 ~~aG~P~gvv~~v~g~~~~~~~~~l~~~~~v~~i~fTGS~~~G~~i~~~a~~pv~lELGGk~p~IV~~dADl~~Aa~~i~ 241 (406)
T cd07079 162 EEAGLPEDAVQLIPDTDREAVQELLKLDDYIDLIIPRGGAGLIRFVVENATIPVIKHGDGNCHVYVDESADLEMAVRIVV 241 (406)
T ss_pred HHcCCCcccEEEecCCChHHHHHHHcCCCCccEEEeCCCHHHHHHHHHhcCCCEEeecCCcceEEEeCCCCHHHHHHHHH
Confidence 789 99999999995 4 36789999999999999999999999999888999999999999999999999999999999
Q ss_pred hhccCCCccccccceEEEcCcccChhhHHHHHHHHHHcCceEecCcccccccc--C-CCCccccccccCceEEEEEeCCH
Q 005041 534 DAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLQ--I-PETRLFHHEYNSMVCTVEIVDDV 610 (717)
Q Consensus 534 ~~~~~n~g~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~~~~g~~~~~~~~p--i-~~~~~~~eE~FGPVl~v~~~~~~ 610 (717)
+|+|.|+|+|+|++|+|||++|| |+|+++|++++++.|+++.++.+...++| + ++|++++||+||||++|++|+|+
T Consensus 242 ~~~f~n~G~C~a~~rv~V~~si~-d~f~~~l~~~~~~~ga~~~~g~~~~~~~~ptv~~d~~i~~eE~FGPVl~v~~~~~~ 320 (406)
T cd07079 242 NAKTQRPSVCNALETLLVHRDIA-EEFLPKLAEALREAGVELRGDEETLAILPGAKPATEEDWGTEYLDLILAVKVVDSL 320 (406)
T ss_pred HcccCCCcccccceeEEEeHHHH-HHHHHHHHHHHHHCCCEEecCHHHHHhcccccCCCcchhhhhhhCceeEEEEeCCH
Confidence 99999988999999999999999 89999999999999988876654334554 4 57999999999999999999999
Q ss_pred HHHHHHHHhcCCCceeEEEecCHHHHHHHHhcCCeeeEEEcCCCCCCCCCccCCccccccccCcccccccchhhcccEEE
Q 005041 611 RAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTR 690 (717)
Q Consensus 611 deAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k 690 (717)
||||+++|+++|||++||||+|.++++++++++++|+|+||+++...+..|||++++||+|++.++++|.+|+++||+.|
T Consensus 321 deAi~~aN~~~~GLsa~ift~d~~~a~~~~~~~~~G~v~iN~~~~~~~~~pfg~~~~sG~~~~~g~~~g~~~l~~~~~~k 400 (406)
T cd07079 321 DEAIAHINRYGSGHTEAIVTENYETAERFLREVDSAAVYVNASTRFTDGGEFGLGAEIGISTQKLHARGPMGLEELTTYK 400 (406)
T ss_pred HHHHHHHHHhCCccccEeeeCCHHHHHHHHHhCCeeEEEEeCCCcccCCCccccceeeeeecCCCcCCCCcChHHhcEEE
Confidence 99999999999999999999999999999999999999999987666678999999999976555678999999999999
Q ss_pred EEEec
Q 005041 691 WILRG 695 (717)
Q Consensus 691 ~v~~~ 695 (717)
++.++
T Consensus 401 ~i~~~ 405 (406)
T cd07079 401 YIVRG 405 (406)
T ss_pred EEEeC
Confidence 99865
No 5
>KOG2450 consensus Aldehyde dehydrogenase [Energy production and conversion]
Probab=100.00 E-value=1.5e-82 Score=675.99 Aligned_cols=400 Identities=17% Similarity=0.208 Sum_probs=354.4
Q ss_pred HHHhcCCcceEEEecCCcccccHhhHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
Q 005041 270 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSR--RLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQ 347 (717)
Q Consensus 270 ~~~~tg~~iGT~i~a~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~ 347 (717)
.+|.+|+.++++..++ .+||++++++||+||+ .|++++..+|.++|+++|+++++++++|+...+.|-+|+
T Consensus 41 ~nP~tg~~i~~v~~~~------~~dVd~aV~aAr~Af~~~~W~~~~~~~R~~~L~~~Adlie~~~~~lA~~E~~d~GKp- 113 (501)
T KOG2450|consen 41 VNPATGEVIAKVAEAT------EEDVDEAVKAARSAFKLVDWAKRDAAERGRLLRKLADLIEQDADVLAALEVLDNGKP- 113 (501)
T ss_pred ecCCCCCeEEEecccc------HHHHHHHHHHHHHhcCcCccccCCHHHHHHHHHHHHHHHHhhhHHHhhhcccccCCc-
Confidence 4577889899988888 8999999999999999 699999999999999999999999999999877765544
Q ss_pred hhchhHHHHHHhhcChhHHHHHHHHHHHHhcccccc-cccccccccCCCceEEEeecceeEEEEEcCC-Cch-hHHHHHH
Q 005041 348 EAGYAKSLVSRLALKPGKISSLAKSIRILADMEEPI-GQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIAS 424 (717)
Q Consensus 348 ~~g~~~a~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~ 424 (717)
+.+++ ..++..+++.+++++++++.. +...+. ..+...|++++|+|||+.|+|| ||. +..||++
T Consensus 114 ---~~~a~-------~~Dl~~~~~~~ry~ag~ad~~~~~~~~~---~~~~~~yt~~eP~GV~G~I~pWN~Pllm~awKla 180 (501)
T KOG2450|consen 114 ---YPEAL-------VSDLPPAIDCFRYYAGWADKIHGSTIPT---DGEFFAYTRREPIGVCGQIIPWNFPLLMQAWKLA 180 (501)
T ss_pred ---chhhh-------hcCchhhhhHHHhhccchhhcccccCCC---CCceEEEecCCcceeeeEeccCchHHHHHHHhhh
Confidence 22322 146888999999999888654 444332 3456789999999999999999 596 5679999
Q ss_pred HHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHhh
Q 005041 425 LAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKES 502 (717)
Q Consensus 425 ~ALaaGN~vVlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~ 502 (717)
|||++||+||+||||+||+|+..+++++.+ + ||+||+|+|+| +.++++.|.+||+|++|+||||+.+|+.|++.
T Consensus 181 PALa~GNtvV~Kpae~tplsal~~~~l~~e----aG~P~GVvNii~G~G~~aG~al~sH~dv~kiaFTGSt~~G~~I~~a 256 (501)
T KOG2450|consen 181 PALAAGNTVVLKPAEQTPLTALYLASLCKE----AGFPPGVVNIVPGSGTTAGAALASHPDVDKVAFTGSTPVGKEIMEA 256 (501)
T ss_pred hHHhhCcEEEecCCCCCCchHHHHHHHhHH----hcCCcceEEEccCCCchHHHHHhhCCCCceEEecCCCcchhHHhhh
Confidence 999999999999999999999999999997 7 99999999996 78899999999999999999999999999987
Q ss_pred c----CCCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccChhhHHHHHHHHHH-cCc---
Q 005041 503 T----KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQH-EGV--- 573 (717)
Q Consensus 503 a----~~p~~lElGGk~p~iV~~dADl~~A~~~i~~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~-~~~--- 573 (717)
+ .||++||||||+|.||++|||+|.|++.++.+.|+|.| +|++.+|+|||++|| |+|+++++++.++ +.+
T Consensus 257 aa~~n~K~vtLElGGKsp~Ivf~Dadld~av~~~~~~iF~nqGq~C~a~sR~~Vqe~iy-defv~~~v~~a~~~~kvGdP 335 (501)
T KOG2450|consen 257 AAESNLKPVTLELGGKSPIIVFDDADLDLAVENAAFGIFFNQGQCCTAGSRVFVQESIY-DEFVEKFVAAAKKKLKVGDP 335 (501)
T ss_pred hhhcCCceeccccCCCCcceEecccchHHHHHHHHHHhhcccccccccCceeEEechHH-HHHHHHHHHHHhcccccCCC
Confidence 7 39999999999999999999999999999999999987 999999999999999 8999999999865 422
Q ss_pred -------------------------------eE-ecCccc--cccc--c-C-----CCCccccccccCceEEEEEeCCHH
Q 005041 574 -------------------------------GL-FGGPRA--SKLL--Q-I-----PETRLFHHEYNSMVCTVEIVDDVR 611 (717)
Q Consensus 574 -------------------------------~~-~g~~~~--~~~~--p-i-----~~~~~~~eE~FGPVl~v~~~~~~d 611 (717)
++ +||.+. .++| | | ++|++++||+||||++|++|++.|
T Consensus 336 ~~~~~~qG~~i~~~q~ekI~~yi~~~k~eGa~l~~gG~~~g~~Gyfi~Ptv~~~v~~~m~i~~EEIFGPVv~v~~F~t~e 415 (501)
T KOG2450|consen 336 FDEGTEQGPQISKTQYEKILGYIESGKKEGATLLCGGVRLGDKGYFIKPTVFTNVTDDMRIAKEEIFGPVVVVLKFKTEE 415 (501)
T ss_pred CCcccccccccCHHHHHHHHHHHHHHHhcCCEEEecCcccCCCceEECCeeccCCChhhhhhHhhccCceEEEEecCcHH
Confidence 11 344332 2444 6 3 469999999999999999999999
Q ss_pred HHHHHHHhcCCCceeEEEecCHHHHHHHHhcCCeeeEEEcCCCCCCCCCccCCccccccccCcccccccchhhcccEEEE
Q 005041 612 AAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRW 691 (717)
Q Consensus 612 eAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~ 691 (717)
|+|++||++.|||+++|||+|.++++++++++++|+||||+........||||.+.||+| ++.|.++++.||+.|+
T Consensus 416 E~i~~AN~t~yGLAa~V~t~dl~~a~~va~~l~aGtVwiN~y~~~~~~~PfgG~K~SG~G----RE~g~~~l~~ytevKt 491 (501)
T KOG2450|consen 416 EVIERANNTTYGLAAGVFTKDLDKAHRVANALQAGTVWINCYNVFDAQVPFGGFKMSGIG----RELGEYGLEAYTEVKT 491 (501)
T ss_pred HHHHHhcCCcccceeeEeccChHHHHHHHHHhcCceEEEeccccccccCCccccccccCC----ccccHHHHhhcceeeE
Confidence 999999999999999999999999999999999999999999888889999999999997 4678999999999999
Q ss_pred EEecCce
Q 005041 692 ILRGNGH 698 (717)
Q Consensus 692 v~~~~~~ 698 (717)
|+++.++
T Consensus 492 v~v~~~~ 498 (501)
T KOG2450|consen 492 VTVKLPQ 498 (501)
T ss_pred EEEeCCC
Confidence 9987653
No 6
>KOG2451 consensus Aldehyde dehydrogenase [Energy production and conversion]
Probab=100.00 E-value=6.3e-82 Score=640.58 Aligned_cols=399 Identities=16% Similarity=0.181 Sum_probs=353.2
Q ss_pred HHHHhcCCcceEEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHh
Q 005041 269 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 348 (717)
Q Consensus 269 l~~~~tg~~iGT~i~a~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~ 348 (717)
+.+|.+|+.++.+...+ -+|.++||.+|.+||.+|++++..||.++|+++.++|.+|++||+++++.|.||+.
T Consensus 43 V~nPa~geii~~V~~~~------V~e~~kAI~aA~EaF~s~~~~takeRs~lLrkwy~Li~en~ddLa~iiTlE~GKpL- 115 (503)
T KOG2451|consen 43 VDNPANGEIIGKVADMT------VEEAEKAIDAAYEAFKSYRNLTAKERSALLRKWYELIMENKDDLATIITLENGKPL- 115 (503)
T ss_pred ccCCCccchhhcccCCc------HHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhchHHHHHHHhhhcCCch-
Confidence 47899999999988888 78999999999999999999999999999999999999999999999987765542
Q ss_pred hchhHHHHHHhhcChhHHHHHHHHHHHHhccccc-ccccccccccCCCceEEEeecceeEEEEEcCC-Cch-hHHHHHHH
Q 005041 349 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 425 (717)
Q Consensus 349 ~g~~~a~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ 425 (717)
.+ ...|+.+.+..++||++.+++ .|+..++. .++.+..+.++|+||+++|+|| ||. +..+|+++
T Consensus 116 ---~e--------A~gEv~y~a~f~eWyAeEA~RvyGdii~s~--~~~rr~i~ikQPvGV~alItPWNFP~AMItRK~gA 182 (503)
T KOG2451|consen 116 ---GE--------AKGEVAYSAAFFEWYAEEARRVYGDIIPSL--NPNRRLIVIKQPVGVVALITPWNFPAAMITRKAGA 182 (503)
T ss_pred ---hh--------ccceeehhHHHHHHHHHHhhhhhccccCCC--CCCceEEEEeccceeEEEecCcCChHHHHHhHHHH
Confidence 22 246888999999999987754 57766532 3456678899999999999999 785 56699999
Q ss_pred HHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC----CChhhhhhcCCCCccEEEeecCHHHHHHHH
Q 005041 426 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS----REEIPDLLKLDDVIDLVIPRGSNKLVSQIK 500 (717)
Q Consensus 426 ALaaGN~vVlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~----~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~ 500 (717)
||++|||||+|||++||++++.++++-.+ | +|+|++|+|++ ..+.+..|..+|+|++|+|||||.+||.++
T Consensus 183 ALAaGCTvVvkPs~~TPlsaLala~lA~~----AGiP~Gv~NVit~~~~~a~eig~~lctsp~VrkisFTGST~VGKiL~ 258 (503)
T KOG2451|consen 183 ALAAGCTVVVKPSEDTPLSALALAKLAEE----AGIPAGVLNVITADASNAAEIGKELCTSPDVRKISFTGSTNVGKILM 258 (503)
T ss_pred HHhcCceEEEccCCCCchHHHHHHHHHHH----cCCCCcceEEEecCCCChHHHHHHhhcCCceeeEEeeccchHHHHHH
Confidence 99999999999999999999999999887 7 99999999982 347889999999999999999999999999
Q ss_pred hhcC---CCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccChhhHHHHHHHHHHcCc---
Q 005041 501 ESTK---IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV--- 573 (717)
Q Consensus 501 ~~a~---~p~~lElGGk~p~iV~~dADl~~A~~~i~~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~--- 573 (717)
+++. |++.||||||.|+||++|||||+|++..+..+|.|+| +|.+++|+|||++|| |+|+++|.++++++.+
T Consensus 259 ~qsastvKkvslELGGNAPfIVFddadld~Av~g~mA~KFr~~GQtCVcaNR~yVh~~iy-D~Fv~~l~e~vkkl~vGdG 337 (503)
T KOG2451|consen 259 AQSASTVKKVSLELGGNAPFIVFDDADLDQAVEGAMACKFRNSGQTCVCANRVYVHDSIY-DKFVSKLAEAVKKLKVGDG 337 (503)
T ss_pred HhhhhhhhheehhhcCCCceEEecCcCHHHHHHHHHHhhhccCCceeEecceeEEehhhH-HHHHHHHHHHHHheeccCC
Confidence 8773 9999999999999999999999999999999999987 999999999999999 7999999999998632
Q ss_pred -------------------------------eE-ecCcccc----ccc-c-C-----CCCccccccccCceEEEEEeCCH
Q 005041 574 -------------------------------GL-FGGPRAS----KLL-Q-I-----PETRLFHHEYNSMVCTVEIVDDV 610 (717)
Q Consensus 574 -------------------------------~~-~g~~~~~----~~~-p-i-----~~~~~~~eE~FGPVl~v~~~~~~ 610 (717)
++ +||.+.. .|| | | .+|-+.+||+|||+.+|++|+|+
T Consensus 338 ~~~~tt~GpLIne~av~Kve~~v~DAvsKga~ii~GGk~~~~lg~~fyePTvl~~V~~~m~~s~eEtFGPla~v~kFdte 417 (503)
T KOG2451|consen 338 LDPGTTQGPLINEKAVEKVEKHVEDAVSKGAKIILGGKERSELGPTFYEPTVLSNVTQNMLVSSEETFGPLASVFKFDTE 417 (503)
T ss_pred CCCCCccCCccCHHHHHHHHHHHHHHHhcCCeEEeCCeEccccCCccccceEeecCCccceeeccccccccceeeeeCCH
Confidence 11 2433111 133 6 2 35888999999999999999999
Q ss_pred HHHHHHHHhcCCCceeEEEecCHHHHHHHHhcCCeeeEEEcCCCCCCCCCccCCccccccccCcccccccchhhcccEEE
Q 005041 611 RAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTR 690 (717)
Q Consensus 611 deAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k 690 (717)
||+|+++||++.||++|+||+|..+..|++++|++|+|.+|.........||||.++||+| ++++.+|+++|+..|
T Consensus 418 eEvi~~ANdt~vGLAgYvfs~~~s~~~rVae~LEvGmVGvNeglis~~~~pFGGVKeSG~G----REgskyGidey~~ik 493 (503)
T KOG2451|consen 418 EEVIEWANDTRVGLAGYVFSNNLSRLFRVAEALEVGMVGVNEGLISDAEAPFGGVKESGFG----REGSKYGIDEYLVIK 493 (503)
T ss_pred HHHHHHhccCccceeeEEeccCHHHHHHHHHHHhcceeecccceecccccCcCCccccccC----ccccccchhhhhhhh
Confidence 9999999999999999999999999999999999999999998877888999999999997 367899999999999
Q ss_pred EEEecC
Q 005041 691 WILRGN 696 (717)
Q Consensus 691 ~v~~~~ 696 (717)
++.+..
T Consensus 494 ~icig~ 499 (503)
T KOG2451|consen 494 YICIGT 499 (503)
T ss_pred eeeecC
Confidence 998753
No 7
>COG1012 PutA NAD-dependent aldehyde dehydrogenases [Energy production and conversion]
Probab=100.00 E-value=4e-79 Score=680.71 Aligned_cols=396 Identities=21% Similarity=0.224 Sum_probs=342.0
Q ss_pred HHHhcCCcceEEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhh
Q 005041 270 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 349 (717)
Q Consensus 270 ~~~~tg~~iGT~i~a~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~ 349 (717)
.+|.+++.++++..++ .+|+++|+++|+.||+.|+++++.+|.++|++++++|++|+++|+++++.|.+++.
T Consensus 19 ~nP~tg~~i~~~~~a~------~~dv~~Av~aA~~a~~~W~~~~~~eR~~iL~~~a~~l~~~~~ela~~~~~e~Gk~i-- 90 (472)
T COG1012 19 INPATGEVIATVPAAT------AEDVDAAVAAARAAFEAWSRLSAEERAAILRRIADLLEARAEELAALITLETGKPI-- 90 (472)
T ss_pred eCCCCCCEEeeecCCC------HHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH--
Confidence 5688999999998888 78999999999999999999999999999999999999999999999988775532
Q ss_pred chhHHHHHHhhcChhHHHHHHHHHHHHhccccc-ccccccccccCCCceEEEeecceeEEEEEcCC-Cch-hHHHHHHHH
Q 005041 350 GYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 426 (717)
Q Consensus 350 g~~~a~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~A 426 (717)
.++ ..++..+++.++++++..+. .+...+. ..+...+++|+|+|||++|+|| ||. +.+|+++||
T Consensus 91 --~ea--------~~ei~~~~~~~~~~a~~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~k~apA 157 (472)
T COG1012 91 --SEA--------RGEIARAADFIRYYAEEARRLEGETIPT---DKGSKALVRREPLGVVGAITPWNFPLALAAWKLAPA 157 (472)
T ss_pred --HHH--------HHHHHHHHHHHHHHHHHHHHhcCCccCC---CCCcceEEEeecceEEEEECCCCCHHHHHHhhHHHH
Confidence 222 23477777888887765542 2332221 1145678899999999999998 796 678999999
Q ss_pred HHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHhhc-
Q 005041 427 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST- 503 (717)
Q Consensus 427 LaaGN~vVlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a- 503 (717)
|++||+||+|||+.||+|+..+++++.+ + +|+|++|+|+| +.++++.|..||+|++|+||||+++|+.|++.+
T Consensus 158 LaaGntVV~KPse~tp~sa~~l~~~~~~----aglP~Gv~nvv~g~~~~~g~~l~~~p~v~~i~FTGSt~~G~~i~~~Aa 233 (472)
T COG1012 158 LAAGNTVVLKPSEQTPLSALALAELAAE----AGLPAGVLNVVTGGGAEVGDALVAHPDVDAISFTGSTAVGRAIAAAAA 233 (472)
T ss_pred HHcCCEEEEECcccCcHHHHHHHHHHHH----hCCCCCeEEEEeCCCchHHHHHhcCCCCCEEEEECChHHHHHHHHHHh
Confidence 9999999999999999999999999987 6 99999999995 566888899999999999999999999999887
Q ss_pred --CCCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccChhhHHHHHHHHHH-cCc------
Q 005041 504 --KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQH-EGV------ 573 (717)
Q Consensus 504 --~~p~~lElGGk~p~iV~~dADl~~A~~~i~~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~-~~~------ 573 (717)
.||++||||||||+||++|||+|.|++.+++|+|.|+| +|+|++|+|||+++| |+|+++|+++ ++ +.+
T Consensus 234 ~~~k~~~lELGGk~p~IV~~dAdl~~Av~~~~~g~f~n~GQ~C~a~~R~~V~~~v~-d~f~~~l~~~-~~~l~~Gd~~d~ 311 (472)
T COG1012 234 ANLKPVTLELGGKSPAIVLEDADLDAAVDAAVFGAFFNAGQRCTAASRLIVHESVY-DEFVERLVAR-AASLKVGDPLDP 311 (472)
T ss_pred hcCCcEEEECCCCCCeEECCCCCHHHHHHHHHHHHHhCCCCCccCCeEEEEehhhH-HHHHHHHHHH-HhcCCCCCCCCC
Confidence 39999999999999999999999999999999999987 999999999999999 8999999999 76 111
Q ss_pred ----------------------------eE-ecCccccccc--c-C-----CCCccccccccCceEEEEEeCCHHHHHHH
Q 005041 574 ----------------------------GL-FGGPRASKLL--Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDH 616 (717)
Q Consensus 574 ----------------------------~~-~g~~~~~~~~--p-i-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~ 616 (717)
.+ .|+.+..++| | | ++|++++||+||||++|++|+|+||||++
T Consensus 312 ~t~~Gpli~~~~~~~v~~~i~~a~~~G~~~~~Gg~~~~g~~~~PTv~~~v~~~~~i~~eEiFGPVl~v~~~~~~dEAi~l 391 (472)
T COG1012 312 STDLGPLISEEQLDRVEGYIEDAVAEGARLLAGGKRPGGYFVEPTILEGVTPDMRIAREEIFGPVLPVIRFKDEEEAIEL 391 (472)
T ss_pred CCccCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCcCCCCeEECCEEEecCCCCChhhhccccCCceEEEEeCCHHHHHHH
Confidence 01 1222222333 5 3 46999999999999999999999999999
Q ss_pred HHhcCCCceeEEEecCHHHHHHHHhcCCeeeEEEcCCCC--CCCCCccCCccccccccCcccccccchhhcccEEEEEEe
Q 005041 617 IHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTR--FCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILR 694 (717)
Q Consensus 617 aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~v~iN~~~~--~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v~~ 694 (717)
+|+++|||++||||+|..++.++++++++|+|+||+... .....||||.+.||+| +++|.+++++|++.|++..
T Consensus 392 AN~t~yGL~a~v~t~d~~~~~~~~~~l~aG~v~iN~~~~~~~~~~~PFGG~k~SG~G----~~~g~~~~~~~~~~k~v~~ 467 (472)
T COG1012 392 ANDTEYGLAAAIFTRDLARAFRVARRLEAGMVGINDYTGGADIAYLPFGGVKQSGLG----REGGKYGLEEFTEVKTVTI 467 (472)
T ss_pred HhCCCCCceEEEEcCCHHHHHHHHhcCCeeEEEECCCCCCCCCCCCCCCCcccccCC----ccchHHHHHHHhcceEEEE
Confidence 999999999999999999999999999999999998853 3456899999999986 3468999999999999987
Q ss_pred cC
Q 005041 695 GN 696 (717)
Q Consensus 695 ~~ 696 (717)
+.
T Consensus 468 ~~ 469 (472)
T COG1012 468 KL 469 (472)
T ss_pred ec
Confidence 64
No 8
>TIGR00407 proA gamma-glutamyl phosphate reductase. The prosite motif begins at residue 332 of the seed alignment although not all of the members of the family exactly obey the motif.
Probab=100.00 E-value=2.9e-78 Score=660.84 Aligned_cols=388 Identities=44% Similarity=0.733 Sum_probs=344.7
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhhchhHHHHHHhhcChhHHHHHHHHHHHHhcccc
Q 005041 302 ARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRILADMEE 381 (717)
Q Consensus 302 A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~g~~~a~~~~~~~~~~~i~~~~~~~~~~~~~~~ 381 (717)
|++||+.|+++|.++|.++|++++++|++|+++|+++++.|+...+|+|++..+.+++..+..++..+++.++++++.++
T Consensus 1 a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~a~~~E~Gk~~~~~~~l~~a~~ev~~~~~~~~~~a~~a~ 80 (398)
T TIGR00407 1 AKQAANILAQLSTAEKNDALSKIADGLEAQAPAILAANAKDIAVAKENGLADALLDRLLLTEGRLKGIADGVKDVIELAD 80 (398)
T ss_pred ChhHHHHHHhCCHHHHHHHHHHHHHHHHhChHHHHHHhHHHHHHHHHcCCCHHHHHHHcCCHHHHHHHHHHHHHHhcCCC
Confidence 57899999999999999999999999999999999998888888888888755555555667789999999999998776
Q ss_pred cccccccccccCCCceEEEeecceeEEEEEcCCCchhHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-c
Q 005041 382 PIGQILKRTELADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-V 460 (717)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~~P~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~~~~~al~~a-l 460 (717)
..|+..+......+...+++|+|+|||++|+||||++++++++|||++||+||+||||.||+|+..+++++++++.++ +
T Consensus 81 ~~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~pw~p~~~~~~~~~ALaaGN~vVlKps~~tp~~~~~l~~~~~~al~eaGl 160 (398)
T TIGR00407 81 PVGKVIDGRELDSGLTLERVRVPLGVLGVIYEARPNVTVDIASLCLKTGNAVILRGGKEAVRSNKALVEVIQDALAQTGL 160 (398)
T ss_pred CCcccccceecCCCceEEEEEeCcEEEEEEeCCCchHHHHHHHHHHHhCCeEEECCChhhHHHHHHHHHHHHHHHHHcCC
Confidence 666443321112355678899999999999999888888999999999999999999999999999999998888889 9
Q ss_pred CcCceEEecC-C-ChhhhhhcCCCCccEEEeecCHHHHHHHHhhcCCCEEEecCCcceEEEcCCCCHHHHHHHHHhhccC
Q 005041 461 GEKLIGLVTS-R-EEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKID 538 (717)
Q Consensus 461 P~gvv~vv~~-~-~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a~~p~~lElGGk~p~iV~~dADl~~A~~~i~~~~~~ 538 (717)
|+|+||+|++ + ++++++|..||+||+|+||||+++|+.+++.+.+|+++|||||||+||++|||+|+|++.+++|+|+
T Consensus 161 P~gvv~~v~g~~~~~~~~~l~~~~~v~~v~fTGs~~vg~~~~~~~~~~~~~e~gGk~p~iV~~dADl~~Aa~~iv~~~~~ 240 (398)
T TIGR00407 161 PVGAVQLIETPSRELVSELLDLDEYIDLLIPRGGNGLVRLIKQTSTIPVLGHGDGICHIYLDESADLIKAIKVIVNAKTQ 240 (398)
T ss_pred ChhHEEEecCCCHHHHHHHHhCCCCeeEEEecCCHHHHHHHHHhCCCCEEEecCCcceEEEeCCCCHHHHHHHHHhhhcC
Confidence 9999999995 4 4578999999999999999999999999988789999999999999999999999999999999998
Q ss_pred CCccccccceEEEcCcccChhhHHHHHHHHHHcCceEecCccccccc----c-C--CCCccccccccCceEEEEEeCCHH
Q 005041 539 YPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLL----Q-I--PETRLFHHEYNSMVCTVEIVDDVR 611 (717)
Q Consensus 539 n~g~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~~~~g~~~~~~~~----p-i--~~~~~~~eE~FGPVl~v~~~~~~d 611 (717)
|+|+|+|++|+|||++|| |+|+++|+++++++++.+........++ | + .+|++++||+||||++|++|+|+|
T Consensus 241 ~GQ~C~a~~rv~V~~~v~-d~f~~~l~~~~~~~~~~~~~~~~i~~~v~~g~~tv~~~~~~i~~eE~FgPvl~v~~~~~~~ 319 (398)
T TIGR00407 241 RPSTCNAIETLLVNKAIA-REFLPVLENQLLEKGVTIHADAYALKLLELGPATEAIVCKTDFDKEFLSLDLSVKIVESLE 319 (398)
T ss_pred CCCcccccceEEEeHHHH-HHHHHHHHHHHHhcCCEEecCHHHHHHHhccCccccccccccccchhhCceeEEEEECCHH
Confidence 766999999999999999 8999999999998876542211111222 1 2 357899999999999999999999
Q ss_pred HHHHHHHhcCCCceeEEEecCHHHHHHHHhcCCeeeEEEcCCCCCCCCCccCCccccccccCcccccccchhhcccEEE
Q 005041 612 AAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTR 690 (717)
Q Consensus 612 eAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k 690 (717)
|||+++|+++|||++||||+|.+++++|++++++|+|+||+++...+..|||.|.+.|+|+++.|.+|+.+++.||+.|
T Consensus 320 eAi~~aN~~~~GL~a~I~t~d~~~a~~~a~~i~~G~v~iN~~~~~~~~~pfG~~~~~~~~~~~~~~rg~~~~~~~~~~~ 398 (398)
T TIGR00407 320 AAIQHINQYGTQHSDAILTENKANAEQFQNGVDSAAVYHNASTRFTDGFRFGFGAEVGISTQKLHARGPMGLEALTSYK 398 (398)
T ss_pred HHHHHHHHhCCCCceEEEeCCHHHHHHHHHhCCeeEEEEeCCCCcCCCcccccceeeEEecCCCcCCCCcCHHHhcCCC
Confidence 9999999999999999999999999999999999999999998888889999999999999999999999999999876
No 9
>PRK11241 gabD succinate-semialdehyde dehydrogenase I; Provisional
Probab=100.00 E-value=1.3e-77 Score=673.99 Aligned_cols=397 Identities=17% Similarity=0.164 Sum_probs=342.8
Q ss_pred HHHhcCCcceEEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhh
Q 005041 270 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 349 (717)
Q Consensus 270 ~~~~tg~~iGT~i~a~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~ 349 (717)
.+|.+|+.++++..++ .+|+++++++|++||+.|+++|.++|.++|++++++|++|+++|++++++|.|++..
T Consensus 31 ~nP~tg~~v~~~~~~~------~~~v~~av~~A~~a~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~- 103 (482)
T PRK11241 31 TNPANGDKLGSVPKMG------ADETRAAIDAANRALPAWRALTAKERANILRRWFNLMMEHQDDLARLMTLEQGKPLA- 103 (482)
T ss_pred ECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHH-
Confidence 5688999999998888 899999999999999999999999999999999999999999999998877665431
Q ss_pred chhHHHHHHhhcChhHHHHHHHHHHHHhccccc-ccccccccccCCCceEEEeecceeEEEEEcCC-Cch-hHHHHHHHH
Q 005041 350 GYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 426 (717)
Q Consensus 350 g~~~a~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~A 426 (717)
++ ..|+..+++.+++++...+. .+...+.. ..+...+++|+|+|||++|+|| ||. +.+++++||
T Consensus 104 ---~a--------~~ev~~~~~~~~~~a~~~~~~~g~~~~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~A 170 (482)
T PRK11241 104 ---EA--------KGEISYAASFIEWFAEEGKRIYGDTIPGH--QADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPA 170 (482)
T ss_pred ---HH--------HHHHHHHHHHHHHHHHHHHHhcCcccccC--CCCceEEEEEeeceEEEEECCCcChHHHHHHHHHHH
Confidence 21 24677778888877754432 23322211 1233457889999999999998 786 567999999
Q ss_pred HHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHhhc-
Q 005041 427 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST- 503 (717)
Q Consensus 427 LaaGN~vVlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a- 503 (717)
|++||+||+||||.||+|+..+++++.+ + +|+|++|+|+| +.++++.|..||+||+|+||||+++|++|++.+
T Consensus 171 LaaGN~VVlKPs~~tp~~~~~l~~~~~~----aglP~gvv~vv~g~~~~~~~~l~~~~~v~~v~FTGS~~~G~~i~~~aa 246 (482)
T PRK11241 171 LAAGCTMVLKPASQTPFSALALAELAIR----AGIPAGVFNVVTGSAGAVGGELTSNPLVRKLSFTGSTEIGRQLMEQCA 246 (482)
T ss_pred HHhCCEEEEECCCCChHHHHHHHHHHHH----cCCCcccEEEEecCCchhHHHHhcCCCCCEEEEECcHHHHHHHHHHHH
Confidence 9999999999999999999999999987 7 99999999996 566788888999999999999999999998877
Q ss_pred --CCCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccChhhHHHHHHHHHHcCc-------
Q 005041 504 --KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------- 573 (717)
Q Consensus 504 --~~p~~lElGGk~p~iV~~dADl~~A~~~i~~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~------- 573 (717)
.+|+++|||||||+||++|||+|.|++.+++|+|.|+| +|+|++|||||+++| |+|+++|+++++++.+
T Consensus 247 ~~l~~~~lElGGknp~IV~~dADld~aa~~i~~~~f~~aGQ~C~a~~ri~V~~~i~-d~f~~~l~~~~~~l~~G~p~~~~ 325 (482)
T PRK11241 247 KDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVY-DRFAEKLQQAVSKLHIGDGLEKG 325 (482)
T ss_pred hcCCcEEEECCCCCeEEEcCCCCHHHHHHHHHHHHHhcCCCCCccCeEEEEeHHHH-HHHHHHHHHHHhhCCCCCCCCCC
Confidence 48999999999999999999999999999999999987 999999999999999 8999999999987631
Q ss_pred ---------------------------eE-ecCccc--cccc--c-C-----CCCccccccccCceEEEEEeCCHHHHHH
Q 005041 574 ---------------------------GL-FGGPRA--SKLL--Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAID 615 (717)
Q Consensus 574 ---------------------------~~-~g~~~~--~~~~--p-i-----~~~~~~~eE~FGPVl~v~~~~~~deAi~ 615 (717)
++ .|+... .++| | | ++|++++||+||||++|++|+|+||||+
T Consensus 326 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~GG~~~~~~g~f~~Ptvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eai~ 405 (482)
T PRK11241 326 VTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHELGGNFFQPTILVDVPANAKVAKEETFGPLAPLFRFKDEADVIA 405 (482)
T ss_pred CCcCCCCCHHHHHHHHHHHHHHHhCCCEEEecCCCCCCCCeEEeeEEEECCCCCChhhhCcCcCCEEEEEEeCCHHHHHH
Confidence 12 244321 2333 6 2 3689999999999999999999999999
Q ss_pred HHHhcCCCceeEEEecCHHHHHHHHhcCCeeeEEEcCCCCCCCCCccCCccccccccCcccccccchhhcccEEEEEEec
Q 005041 616 HIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRG 695 (717)
Q Consensus 616 ~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v~~~ 695 (717)
++|+++|||++||||+|.++++++++++++|+||||+.....+..||||.|.||+| +++|.+|+++||+.|++++.
T Consensus 406 ~aN~s~~GL~a~Vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G----~~~g~~g~~~ft~~k~v~~~ 481 (482)
T PRK11241 406 QANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLG----REGSKYGIEDYLEIKYMCIG 481 (482)
T ss_pred HhhCCCCCceEEEEcCCHHHHHHHHHHcCccEEEECCCCCCCCCCCcCCccccccC----cccHHHHHHHhhcceEEEEe
Confidence 99999999999999999999999999999999999987665566899999999986 35689999999999998763
No 10
>PLN02419 methylmalonate-semialdehyde dehydrogenase [acylating]
Probab=100.00 E-value=1.7e-77 Score=678.31 Aligned_cols=399 Identities=17% Similarity=0.194 Sum_probs=340.1
Q ss_pred HHHhcCCcceEEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhh
Q 005041 270 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 349 (717)
Q Consensus 270 ~~~~tg~~iGT~i~a~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~ 349 (717)
.+|.+|+.++++..++ .+|+++|+++|++||+.|++++.++|.++|++++++|++|+++|++++++|.||+..
T Consensus 134 ~nP~tg~~i~~v~~a~------~~dv~~Av~aA~~A~~~W~~~~~~eR~~iL~k~a~~L~~~~~ela~~~~~E~GKp~~- 206 (604)
T PLN02419 134 INPATQEVVSKVPLTT------NEEFKAAVSAAKQAFPLWRNTPITTRQRVMLKFQELIRKNMDKLAMNITTEQGKTLK- 206 (604)
T ss_pred ECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHH-
Confidence 5688999999998888 899999999999999999999999999999999999999999999999888766532
Q ss_pred chhHHHHHHhhcChhHHHHHHHHHHHHhccccc-ccccccccccCCCceEEEeecceeEEEEEcCC-Cch-hHHHHHHHH
Q 005041 350 GYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 426 (717)
Q Consensus 350 g~~~a~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~A 426 (717)
++ ..|+..+++.++++++..+. .++..+.. ..+...+++|+|+|||++|+|| ||. +.+++++||
T Consensus 207 ---ea--------~~EV~~~i~~~~~~a~~a~~~~g~~~~~~--~~~~~~~~~reP~GVV~~I~PwNfPl~l~~~~iapA 273 (604)
T PLN02419 207 ---DS--------HGDIFRGLEVVEHACGMATLQMGEYLPNV--SNGVDTYSIREPLGVCAGICPFNFPAMIPLWMFPVA 273 (604)
T ss_pred ---HH--------HHHHHHHHHHHHHHHHHHHHhhCCccccc--CCCccceEEecCccEEEEECCCccHHHHHHHHHHHH
Confidence 22 23566677777776654322 23222211 1233457889999999999998 785 567999999
Q ss_pred HHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecCCChhhhhhcCCCCccEEEeecCHHHHHHHHhhc--
Q 005041 427 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST-- 503 (717)
Q Consensus 427 LaaGN~vVlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a-- 503 (717)
|++||+||+|||+.||+|+..+++++.+ + ||+|+||+|+|..++++.|..||+||+|+||||+++|+.|++.|
T Consensus 274 LaAGNtVVlKPSe~tp~ta~~l~~l~~e----AGlP~GvvnvV~G~~~~~~~L~~~~~Vd~V~FTGSt~vG~~I~~~Aa~ 349 (604)
T PLN02419 274 VTCGNTFILKPSEKDPGASVILAELAME----AGLPDGVLNIVHGTNDTVNAICDDEDIRAVSFVGSNTAGMHIYARAAA 349 (604)
T ss_pred HHcCCEEEEeCCCCCcHHHHHHHHHHHH----hCcCcceEEEEeCChHHHHHHHhCCCCCEEEEeCChHHHHHHHHHHhc
Confidence 9999999999999999999999999987 7 99999999997445677788899999999999999999999876
Q ss_pred -CCCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccChhhHHHHHHHHHHcCc--------
Q 005041 504 -KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV-------- 573 (717)
Q Consensus 504 -~~p~~lElGGk~p~iV~~dADl~~A~~~i~~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~-------- 573 (717)
.+|++||||||||+||++|||||.|++.+++|+|.|+| +|+|++|||||++ | |+|+++|+++++++.+
T Consensus 350 ~lk~v~LELGGknp~IV~~DADld~Aa~~iv~g~f~naGQ~C~A~~Rv~V~~~-~-d~f~e~l~~~~~~l~vG~p~d~~t 427 (604)
T PLN02419 350 KGKRIQSNMGAKNHGLVLPDANIDATLNALLAAGFGAAGQRCMALSTVVFVGD-A-KSWEDKLVERAKALKVTCGSEPDA 427 (604)
T ss_pred cCCcEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhhCCCCcCCCCEEEEeCc-H-HHHHHHHHHHHHHhccCCCCCCCC
Confidence 38999999999999999999999999999999999987 9999999999999 9 7999999999887531
Q ss_pred --------------------------eE-ecCccc------cc-cc-c-C-----CCCccccccccCceEEEEEeCCHHH
Q 005041 574 --------------------------GL-FGGPRA------SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRA 612 (717)
Q Consensus 574 --------------------------~~-~g~~~~------~~-~~-p-i-----~~~~~~~eE~FGPVl~v~~~~~~de 612 (717)
++ .|+.+. .+ |+ | | ++|++++||+||||++|++|+|+||
T Consensus 428 ~~GPlis~~~~~~v~~~i~~A~~~GAkvl~GG~~~~~~~~~~G~f~~PTVL~~v~~d~~i~~eEiFGPVl~V~~~~~~dE 507 (604)
T PLN02419 428 DLGPVISKQAKERICRLIQSGVDDGAKLLLDGRDIVVPGYEKGNFIGPTILSGVTPDMECYKEEIFGPVLVCMQANSFDE 507 (604)
T ss_pred CccCCCCHHHHHHHHHHHHHHHhcCCEEEeCCccccCCCCCCCeEEeeEEEeCCCCCCHHHcCCCcCCEEEEEecCCHHH
Confidence 22 244321 23 33 5 2 4689999999999999999999999
Q ss_pred HHHHHHhcCCCceeEEEecCHHHHHHHHhcCCeeeEEEcCCCCC-CCCCccCCccccccccCcccccccchhhcccEEEE
Q 005041 613 AIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRF-CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRW 691 (717)
Q Consensus 613 Ai~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~v~iN~~~~~-~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~ 691 (717)
||+++|+++|||++||||+|.+++.++++++++|+|+||+.... .+.+||||.|.||+|. .+++|.+|+++||+.|+
T Consensus 508 AI~laN~s~yGLaasVfT~d~~~a~~~a~~l~aG~V~IN~~~~~~~~~~PFGG~k~SG~G~--~~~~G~~gl~~ft~~K~ 585 (604)
T PLN02419 508 AISIINKNKYGNGAAIFTSSGAAARKFQMDIEAGQIGINVPIPVPLPFFSFTGNKASFAGD--LNFYGKAGVDFFTQIKL 585 (604)
T ss_pred HHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCeeeEEEcCCCCCCCCCCCcCCcCcCCCCC--CcccHHHHHHHhhCeEE
Confidence 99999999999999999999999999999999999999987433 3578999999999862 12468999999999999
Q ss_pred EEecC
Q 005041 692 ILRGN 696 (717)
Q Consensus 692 v~~~~ 696 (717)
|+++.
T Consensus 586 v~~~~ 590 (604)
T PLN02419 586 VTQKQ 590 (604)
T ss_pred EEEcc
Confidence 98764
No 11
>PLN02174 aldehyde dehydrogenase family 3 member H1
Probab=100.00 E-value=9.6e-77 Score=661.86 Aligned_cols=386 Identities=19% Similarity=0.208 Sum_probs=324.6
Q ss_pred HhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhhchhHHHHHHhhcChhHHHHHHH
Q 005041 292 QVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAK 371 (717)
Q Consensus 292 ~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~g~~~a~~~~~~~~~~~i~~~~~ 371 (717)
..|+++++++|++||++|+++|.++|.++|++++++|++|+|||++++++|+||+.. ++...++..+.++++++++
T Consensus 9 ~~~v~~av~~a~~af~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~l~~e~GKp~~----~a~~~Ev~~~~~~~~~~~~ 84 (484)
T PLN02174 9 AADASILVTELRRSFDDGVTRGYEWRVTQLKKLMIICDNHEPEIVAALRDDLGKPEL----ESSVYEVSLLRNSIKLALK 84 (484)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH----HHHHHHHHHHHHHHHHHHH
Confidence 679999999999999999999999999999999999999999999999998876532 3322344444566777777
Q ss_pred HHHHHhcccccccccccccccCCCceEEEeecceeEEEEEcCC-Cch-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHH
Q 005041 372 SIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILH 449 (717)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~ 449 (717)
.++.|.+.... ..... ..+...+++|+|+|||++|+|| ||. +++++++|||++||+||+||||.||+|+.+++
T Consensus 85 ~~~~~~~~~~~---~~~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPse~tp~~~~~l~ 159 (484)
T PLN02174 85 QLKNWMAPEKA---KTSLT--TFPASAEIVSEPLGVVLVISAWNYPFLLSIDPVIGAISAGNAVVLKPSELAPASSALLA 159 (484)
T ss_pred HHHHHhccccc---ccccc--cCCcceEEEEecceEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHH
Confidence 77665431110 11111 1223467899999999999998 786 67899999999999999999999999999999
Q ss_pred HHHHHhcccccCcCceEEecCCChhhhhhcCCCCccEEEeecCHHHHHHHHhhc---CCCEEEecCCcceEEEcCCCCHH
Q 005041 450 KVITSAIPDTVGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST---KIPVLGHADGICHVYVDKSANLD 526 (717)
Q Consensus 450 ~~~~~al~~alP~gvv~vv~~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a---~~p~~lElGGk~p~iV~~dADl~ 526 (717)
+++.+ ++|+|+||+|+|+.+.+..|.+ |+||+|+||||+++|+.|++.+ .||++||||||||+||++|||+|
T Consensus 160 ~l~~~----~lp~gvv~vv~G~~~~~~~l~~-~~vd~V~FTGS~~~G~~I~~~aa~~l~~v~LELGGk~p~iV~~dADl~ 234 (484)
T PLN02174 160 KLLEQ----YLDSSAVRVVEGAVTETTALLE-QKWDKIFYTGSSKIGRVIMAAAAKHLTPVVLELGGKSPVVVDSDTDLK 234 (484)
T ss_pred HHHHH----hCCCCEEEEEECChHHHHHHhc-ccCCEEEEECChHHHHHHHHHHHhcCCcEEEecCCCCeEEEcCCCCHH
Confidence 99986 5999999999964333444554 7899999999999999999877 49999999999999999999999
Q ss_pred HHHHHHHhhcc-CCCc-cccccceEEEcCcccChhhHHHHHHHHHHcCc-------------------------------
Q 005041 527 VAKNIVIDAKI-DYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------------------------------- 573 (717)
Q Consensus 527 ~A~~~i~~~~~-~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~------------------------------- 573 (717)
.|++.+++++| .|+| +|+|++|+|||+++| |+|+++|+++++++.+
T Consensus 235 ~Aa~~i~~g~f~~n~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~G~p~~~~~~Gpli~~~~~~~v~~~i~~a~~g 313 (484)
T PLN02174 235 VTVRRIIAGKWGCNNGQACISPDYILTTKEYA-PKVIDAMKKELETFYGKNPMESKDMSRIVNSTHFDRLSKLLDEKEVS 313 (484)
T ss_pred HHHHHHHHHHhhCCCCCCCCcCcEEEEeHHHH-HHHHHHHHHHHHhhcCCCCcccCCcCCCCCHHHHHHHHHHHHHHHcC
Confidence 99999999999 5876 999999999999999 8999999998876521
Q ss_pred -eE-ecCccc-cc-cc-c-C-----CCCccccccccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEecCHHHHHHHHhc
Q 005041 574 -GL-FGGPRA-SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQ 642 (717)
Q Consensus 574 -~~-~g~~~~-~~-~~-p-i-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~ 642 (717)
++ +|+... .+ ++ | | ++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++++++
T Consensus 314 a~~~~GG~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~eai~~aN~~~~gLaa~vft~d~~~a~~~~~~ 393 (484)
T PLN02174 314 DKIVYGGEKDRENLKIAPTILLDVPLDSLIMSEEIFGPLLPILTLNNLEESFDVIRSRPKPLAAYLFTHNKKLKERFAAT 393 (484)
T ss_pred CEEEECCCcCCCCCEEEEEEEecCCCCChhhcCCcCCCeEEEecCCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHc
Confidence 11 244322 13 33 5 2 3689999999999999999999999999999999999999999999999999999
Q ss_pred CCeeeEEEcCCCCCC--CCCccCCccccccccCcccccccchhhcccEEEEEEecC
Q 005041 643 VDSAAVFHNASTRFC--DGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGN 696 (717)
Q Consensus 643 l~~G~v~iN~~~~~~--~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v~~~~ 696 (717)
+++|+|+||++.... +..||||.+.||+| +++|.+|+++||+.|+|.++.
T Consensus 394 l~aG~v~IN~~~~~~~~~~~PfGG~k~SG~G----r~~G~~gl~~ft~~K~v~~~~ 445 (484)
T PLN02174 394 VSAGGIVVNDIAVHLALHTLPFGGVGESGMG----AYHGKFSFDAFSHKKAVLYRS 445 (484)
T ss_pred CCcceEEECCCcCCCCCCCCCCCCcCccccC----ccchHHHHHHhcceEEEEECC
Confidence 999999999876543 56899999999986 356999999999999998764
No 12
>TIGR03374 ABALDH 1-pyrroline dehydrogenase. Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family.
Probab=100.00 E-value=3.5e-76 Score=661.85 Aligned_cols=398 Identities=14% Similarity=0.154 Sum_probs=339.9
Q ss_pred HHHHhcCCcceEEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHh
Q 005041 269 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 348 (717)
Q Consensus 269 l~~~~tg~~iGT~i~a~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~ 348 (717)
..+|.+++.++++..++ .+|+++++++|++||++|+++|.++|.++|++++++|++|+++|++++++|+||+..
T Consensus 20 v~~P~tg~~i~~~~~~~------~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ 93 (472)
T TIGR03374 20 VYNPATGEVILEIAEAS------AEQVDAAVRAADAAFAEWGQTTPKARAECLLKLADVIEENAQVFAELESRNCGKPLH 93 (472)
T ss_pred eECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHH
Confidence 35688999999999888 899999999999999999999999999999999999999999999998887765432
Q ss_pred hchhHHHHHHhhcChhHHHHHHHHHHHHhccccc-ccccccccccCCCceEEEeecceeEEEEEcCC-Cch-hHHHHHHH
Q 005041 349 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 425 (717)
Q Consensus 349 ~g~~~a~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ 425 (717)
++. ..|+...++.+++++...+. .+...+.. ..+...+++|+|+|||++|+|| ||. +.+++++|
T Consensus 94 ----~~~-------~~ev~~~~~~~~~~a~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ 160 (472)
T TIGR03374 94 ----SVF-------NDEIPAIVDVFRFFAGAARCLSGLAAGEY--LEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAP 160 (472)
T ss_pred ----HHH-------HHHHHHHHHHHHHHHHHHHHhcCcccCcc--CCCceEEEEEecceEEEEECCCCchHHHHHHHHHH
Confidence 111 12555666666666543321 12211111 1233567899999999999998 685 56799999
Q ss_pred HHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccccCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHhhc-
Q 005041 426 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDTVGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST- 503 (717)
Q Consensus 426 ALaaGN~vVlKps~~tp~t~~~l~~~~~~al~~alP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a- 503 (717)
||++||+||+|||+.||+|+..+++++.+ +||+|++|+|+| +.++++.|..||+||+|+||||+++|+.|++.+
T Consensus 161 ALaaGN~VV~KPs~~tp~~~~~l~~l~~~----~lP~gv~~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa 236 (472)
T TIGR03374 161 ALAAGNCVVLKPSEITPLTALKLAELAKD----IFPAGVVNILFGRGKTVGDPLTGHEKVRMVSLTGSIATGEHILSHTA 236 (472)
T ss_pred HHhcCCEEEecCCCCCCHHHHHHHHHHHH----hCCcCeEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHh
Confidence 99999999999999999999999999975 499999999996 667888888999999999999999999998877
Q ss_pred --CCCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccChhhHHHHHHHHHHcCc-------
Q 005041 504 --KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------- 573 (717)
Q Consensus 504 --~~p~~lElGGk~p~iV~~dADl~~A~~~i~~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~------- 573 (717)
.||++||||||||+||++|||+|.|++.+++++|.|+| +|+|++|+|||+++| |+|+++|+++++++.+
T Consensus 237 ~~~~~~~lElGGk~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-~~f~~~l~~~~~~l~~G~p~~~~ 315 (472)
T TIGR03374 237 PSIKRTHMELGGKAPVIVFDDADIDAVVEGVRTFGFYNAGQDCTAACRIYAQRGIY-DTLVEKLGAAVATLKSGAPDDES 315 (472)
T ss_pred hcccceEEecCCCCeeEECCCCCHHHHHHHHHHHHHhhcCCccccCCEEEEcHHHH-HHHHHHHHHHHhcCCCCCCCCCC
Confidence 39999999999999999999999999999999999987 999999999999999 8999999999887521
Q ss_pred ----------------------------eE-ecCccc--ccc-c-c-C-----CCCccccccccCceEEEEEeCCHHHHH
Q 005041 574 ----------------------------GL-FGGPRA--SKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAI 614 (717)
Q Consensus 574 ----------------------------~~-~g~~~~--~~~-~-p-i-----~~~~~~~eE~FGPVl~v~~~~~~deAi 614 (717)
++ .|+... .++ + | | ++|++++||+||||++|++|+|+||||
T Consensus 316 ~~~Gpli~~~~~~~v~~~i~~a~~~G~a~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai 395 (472)
T TIGR03374 316 TELGPLSSLAHLERVMKAVEEAKALGHIKVITGGEKRKGNGYYFAPTLLAGAKQDDAIVQKEVFGPVVSITSFDDEEQVV 395 (472)
T ss_pred CcCCCCCCHHHHHHHHHHHHHHHHcCCeEEEeCCccCCCCCeEEeeEEEeCCCCCChhhhCCccCceEEEEEECCHHHHH
Confidence 11 133221 133 3 5 2 368999999999999999999999999
Q ss_pred HHHHhcCCCceeEEEecCHHHHHHHHhcCCeeeEEEcCCCCCCCCCccCCccccccccCcccccccchhhcccEEEEEEe
Q 005041 615 DHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILR 694 (717)
Q Consensus 615 ~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v~~ 694 (717)
+++|+++|||++||||+|.+++.++++++++|+|+||+.....+.+||||.+.||+| +++|.+|+++||+.|++++
T Consensus 396 ~~an~~~~gL~a~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G----~~~g~~~l~~~t~~k~i~~ 471 (472)
T TIGR03374 396 NWANDSQYGLASSVWTKDVGRAHRLSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYG----KDMSLYGLEDYTVVRHIMV 471 (472)
T ss_pred HHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccCccC----ccchHHHHHHhhceEEEEE
Confidence 999999999999999999999999999999999999988766777999999999986 3568999999999999875
No 13
>PLN02315 aldehyde dehydrogenase family 7 member
Probab=100.00 E-value=1.4e-75 Score=660.09 Aligned_cols=403 Identities=16% Similarity=0.204 Sum_probs=343.0
Q ss_pred HHHHhcCCcceEEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHh
Q 005041 269 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 348 (717)
Q Consensus 269 l~~~~tg~~iGT~i~a~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~ 348 (717)
..+|.+++.++++..++ .+|+++|+++|++||+.|+++|.++|.++|++++++|++|.++|++++++|+||+..
T Consensus 38 ~~nP~t~~~i~~~~~a~------~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~GK~~~ 111 (508)
T PLN02315 38 SVNPANNQPIAEVVEAS------LEDYEEGLRACEEAAKIWMQVPAPKRGEIVRQIGDALRAKLDYLGRLVSLEMGKILA 111 (508)
T ss_pred eECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHH
Confidence 46788999999998888 899999999999999999999999999999999999999999999999888765532
Q ss_pred hchhHHHHHHhhcChhHHHHHHHHHHHHhccccc-ccccccccccCCCceEEEeecceeEEEEEcCC-Cch-hHHHHHHH
Q 005041 349 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 425 (717)
Q Consensus 349 ~g~~~a~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ 425 (717)
++ ..|+...++.++++++..+. .+...+. . ..+...+.+|+|+|||++|+|| ||. +++++++|
T Consensus 112 ----~a--------~~ev~~~i~~~~~~~~~~~~l~~~~~~~-~-~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ 177 (508)
T PLN02315 112 ----EG--------IGEVQEIIDMCDFAVGLSRQLNGSIIPS-E-RPNHMMMEVWNPLGIVGVITAFNFPCAVLGWNACI 177 (508)
T ss_pred ----HH--------HHHHHHHHHHHHHHHHHHHHhcCccccC-C-CCCceeEEEEecceEEEEECCCcchHHHHHHHHhH
Confidence 22 23566666777776643322 2222221 1 1233446789999999999998 795 67899999
Q ss_pred HHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecCCChhhhhhcCCCCccEEEeecCHHHHHHHHhhc-
Q 005041 426 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST- 503 (717)
Q Consensus 426 ALaaGN~vVlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a- 503 (717)
||++||+||+||||.||+|+..+++++.+++.++ +|+|++|+|+|+.++++.|..||+||+|+||||+++|+.|++.+
T Consensus 178 ALaaGN~VVlKPs~~tp~~~~~~~~l~~~~~~~aGlP~gvv~~v~g~~~~~~~l~~~~~v~~v~fTGS~~~G~~v~~~aa 257 (508)
T PLN02315 178 ALVCGNCVVWKGAPTTPLITIAMTKLVAEVLEKNNLPGAIFTSFCGGAEIGEAIAKDTRIPLVSFTGSSKVGLMVQQTVN 257 (508)
T ss_pred HHHcCCEEEeeCCCcChHHHHHHHHHHHHHHHHcCCCcccEEEecCChHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHH
Confidence 9999999999999999999999888887777779 99999999997666788888999999999999999999999866
Q ss_pred --CCCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccChhhHHHHHHHHHHcCc-------
Q 005041 504 --KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------- 573 (717)
Q Consensus 504 --~~p~~lElGGk~p~iV~~dADl~~A~~~i~~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~------- 573 (717)
.+|+++|||||||+||++|||+|.|++.+++|+|.|+| .|+|++|+|||++|| |+|+++|+++++++.+
T Consensus 258 ~~~~~~~lElgGknp~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~l~vG~p~~~~ 336 (508)
T PLN02315 258 ARFGKCLLELSGNNAIIVMDDADIQLAVRSVLFAAVGTAGQRCTTCRRLLLHESIY-DDVLEQLLTVYKQVKIGDPLEKG 336 (508)
T ss_pred hcCCCEEEecCCCCeEEECCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEeHHHH-HHHHHHHHHHHHhcCCCCCCCCC
Confidence 38999999999999999999999999999999999986 999999999999999 8999999999987632
Q ss_pred ---------------------------eE-ecCccc--cc-cc-c-C----CCCccccccccCceEEEEEeCCHHHHHHH
Q 005041 574 ---------------------------GL-FGGPRA--SK-LL-Q-I----PETRLFHHEYNSMVCTVEIVDDVRAAIDH 616 (717)
Q Consensus 574 ---------------------------~~-~g~~~~--~~-~~-p-i----~~~~~~~eE~FGPVl~v~~~~~~deAi~~ 616 (717)
++ .|+... .+ |+ | | ++|++++||+||||++|++|+|+||||++
T Consensus 337 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~~~g~~~~Ptvl~v~~~~~i~~eE~FGPVl~V~~~~~~deai~~ 416 (508)
T PLN02315 337 TLLGPLHTPESKKNFEKGIEIIKSQGGKILTGGSAIESEGNFVQPTIVEISPDADVVKEELFGPVLYVMKFKTLEEAIEI 416 (508)
T ss_pred CCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCCCeEEecEEEecCCCChHHhCCCcCCEEEEEEeCCHHHHHHH
Confidence 11 233221 13 33 5 2 46899999999999999999999999999
Q ss_pred HHhcCCCceeEEEecCHHHHHHHHh--cCCeeeEEEcCCCCC-CCCCccCCccccccccCcccccccchhhcccEEEEEE
Q 005041 617 IHQHGSAHTDCIVAEDQKVAETFLC--QVDSAAVFHNASTRF-CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 693 (717)
Q Consensus 617 aN~~~~GL~a~I~t~d~~~a~~~~~--~l~~G~v~iN~~~~~-~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v~ 693 (717)
+|+++|||++||||+|.++++++++ ++++|+||||+++.. .+.+||||.+.||+| +++|.+|+++||+.|+|.
T Consensus 417 aN~~~~gL~a~Vft~d~~~a~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G----~~~G~~~l~~ft~~k~v~ 492 (508)
T PLN02315 417 NNSVPQGLSSSIFTRNPETIFKWIGPLGSDCGIVNVNIPTNGAEIGGAFGGEKATGGG----REAGSDSWKQYMRRSTCT 492 (508)
T ss_pred HhCCCCCCeEEEEcCCHHHHHHHhhhcccceeEEEEcCCCCCCCCCCCCCccccccCC----ccchHHHHHHHhhEEEEE
Confidence 9999999999999999999999985 799999999986544 467899999999986 346899999999999988
Q ss_pred ecC
Q 005041 694 RGN 696 (717)
Q Consensus 694 ~~~ 696 (717)
++.
T Consensus 493 ~~~ 495 (508)
T PLN02315 493 INY 495 (508)
T ss_pred Eec
Confidence 764
No 14
>PLN02766 coniferyl-aldehyde dehydrogenase
Probab=100.00 E-value=1.7e-75 Score=660.22 Aligned_cols=399 Identities=18% Similarity=0.191 Sum_probs=340.9
Q ss_pred HHHHhcCCcceEEEecCCcccccHhhHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
Q 005041 269 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSR--RLQALQSQDRRKILLDVADALEANESLIKVENEADVAAA 346 (717)
Q Consensus 269 l~~~~tg~~iGT~i~a~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~ 346 (717)
..+|.+++.++++..++ .+|+++++++|++||+ .|+++|.++|+++|++++++|++|+++|++++++|+||+
T Consensus 40 ~~~P~tg~~i~~~~~~~------~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~ 113 (501)
T PLN02766 40 TRDPRTGEVIARIAEGD------KEDVDLAVKAAREAFDHGPWPRMSGFERGRIMMKFADLIEEHIEELAALDTIDAGKL 113 (501)
T ss_pred eECCCCCCEEEEEeCCC------HHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCC
Confidence 36788999999998888 8999999999999998 599999999999999999999999999999998887654
Q ss_pred HhhchhHHHHHHhhcChhHHHHHHHHHHHHhcccc-cccccccccccCCCceEEEeecceeEEEEEcCC-Cch-hHHHHH
Q 005041 347 QEAGYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIA 423 (717)
Q Consensus 347 ~~~g~~~a~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~ 423 (717)
.. ++. ..|+...++.+++++...+ ..|+..+. ..+...+++|+|+|||++|+|| ||. +.++++
T Consensus 114 ~~----~a~-------~~ev~~~~~~l~~~a~~~~~~~g~~~~~---~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~ 179 (501)
T PLN02766 114 FA----LGK-------AVDIPAAAGLLRYYAGAADKIHGETLKM---SRQLQGYTLKEPIGVVGHIIPWNFPSTMFFMKV 179 (501)
T ss_pred HH----HHH-------HHHHHHHHHHHHHHHHHHHHhcCceecc---CCCceEEEEeccceEEEEECCCCChHHHHHHHH
Confidence 31 211 1245566666666664332 22322211 1233457889999999999998 786 567999
Q ss_pred HHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHh
Q 005041 424 SLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKE 501 (717)
Q Consensus 424 ~~ALaaGN~vVlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~ 501 (717)
+|||++||+||+||||.||+++.++++++.+ + ||+|++|+|+| +.++++.|..||+||+|+||||+++||.|++
T Consensus 180 ~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~----aGlP~gvv~~v~g~~~~~~~~L~~~p~v~~V~FTGS~~~G~~i~~ 255 (501)
T PLN02766 180 APALAAGCTMVVKPAEQTPLSALFYAHLAKL----AGVPDGVINVVTGFGPTAGAAIASHMDVDKVSFTGSTEVGRKIMQ 255 (501)
T ss_pred HHHHHcCCEEEEeCCCCchHHHHHHHHHHHh----cCCCcCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHH
Confidence 9999999999999999999999999999987 7 99999999996 5678888889999999999999999999988
Q ss_pred hcC----CCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccChhhHHHHHHHHHHcCc---
Q 005041 502 STK----IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV--- 573 (717)
Q Consensus 502 ~a~----~p~~lElGGk~p~iV~~dADl~~A~~~i~~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~--- 573 (717)
.+. +|+++|||||||+||++|||+|.|++.+++++|.|+| +|+|++|||||+++| |+|+++|+++++++.+
T Consensus 256 ~aa~~~l~~~~lElGGknp~iV~~dADl~~Aa~~i~~g~f~n~GQ~C~a~~ri~V~~si~-d~f~~~l~~~~~~l~~G~p 334 (501)
T PLN02766 256 AAATSNLKQVSLELGGKSPLLIFDDADVDMAVDLALLGIFYNKGEICVASSRVYVQEGIY-DEFVKKLVEKAKDWVVGDP 334 (501)
T ss_pred HhhhcCCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeEEEEcHHHH-HHHHHHHHHHHHhccCCCC
Confidence 663 8999999999999999999999999999999999986 999999999999999 8999999999887521
Q ss_pred -------------------------------eE-ecCccc--cc-cc-c-C-----CCCccccccccCceEEEEEeCCHH
Q 005041 574 -------------------------------GL-FGGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVR 611 (717)
Q Consensus 574 -------------------------------~~-~g~~~~--~~-~~-p-i-----~~~~~~~eE~FGPVl~v~~~~~~d 611 (717)
++ .|+... .+ |+ | | ++|++++||+||||++|++|+|+|
T Consensus 335 ~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~d 414 (501)
T PLN02766 335 FDPRARQGPQVDKQQFEKILSYIEHGKREGATLLTGGKPCGDKGYYIEPTIFTDVTEDMKIAQDEIFGPVMSLMKFKTVE 414 (501)
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCCCCCeEEeeEEEecCCCCChhhhCCccCceEEEEEeCCHH
Confidence 12 233321 23 33 5 2 368999999999999999999999
Q ss_pred HHHHHHHhcCCCceeEEEecCHHHHHHHHhcCCeeeEEEcCCCCCCCCCccCCccccccccCcccccccchhhcccEEEE
Q 005041 612 AAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRW 691 (717)
Q Consensus 612 eAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~ 691 (717)
|||+++|+++|||++||||+|.+++.++++++++|+|+||+.....+.+||||.+.||+| +++|++|+++||+.|+
T Consensus 415 eai~~aN~~~~GL~a~Vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G----~~~G~~~l~~ft~~k~ 490 (501)
T PLN02766 415 EAIKKANNTKYGLAAGIVTKDLDVANTVSRSIRAGTIWVNCYFAFDPDCPFGGYKMSGFG----RDQGMDALDKYLQVKS 490 (501)
T ss_pred HHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccCcCC----ccchHHHHHHHhceEE
Confidence 999999999999999999999999999999999999999987766677899999999986 3569999999999999
Q ss_pred EEecC
Q 005041 692 ILRGN 696 (717)
Q Consensus 692 v~~~~ 696 (717)
|++..
T Consensus 491 v~~~~ 495 (501)
T PLN02766 491 VVTPL 495 (501)
T ss_pred EEEec
Confidence 98854
No 15
>PRK13968 putative succinate semialdehyde dehydrogenase; Provisional
Probab=100.00 E-value=4.2e-75 Score=652.01 Aligned_cols=395 Identities=16% Similarity=0.219 Sum_probs=335.6
Q ss_pred HHHhcCCcceEEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhh
Q 005041 270 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 349 (717)
Q Consensus 270 ~~~~tg~~iGT~i~a~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~ 349 (717)
.+|.+++.++++..++ .+++++++++|++||+.|++++.++|.++|++++++|++|+++|++++++|+|++..
T Consensus 12 ~nP~t~~~i~~~~~~~------~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~- 84 (462)
T PRK13968 12 VNPATGEQLSVLPWAG------ADDIENALQLAAAGFRDWRETNIDYRAQKLRDIGKALRARSEEMAQMITREMGKPIN- 84 (462)
T ss_pred ECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhCCCHH-
Confidence 5688999999999888 899999999999999999999999999999999999999999999999888766532
Q ss_pred chhHHHHHHhhcChhHHHHHHHHHHHHhccccc-ccccccccccCCCceEEEeecceeEEEEEcCC-Cch-hHHHHHHHH
Q 005041 350 GYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 426 (717)
Q Consensus 350 g~~~a~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~A 426 (717)
++. .|+...++.+++++...+. .+..... ..+...+++|+|+|||++|+|| ||. +.+++++||
T Consensus 85 ---~a~--------~ev~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~GvV~~I~PwN~P~~~~~~~~~~A 150 (462)
T PRK13968 85 ---QAR--------AEVAKSANLCDWYAEHGPAMLKAEPTL---VENQQAVIEYRPLGTILAIMPWNFPLWQVMRGAVPI 150 (462)
T ss_pred ---HHH--------HHHHHHHHHHHHHHHHHHHhhCCcccc---CCCceEEEEEeccceEEEEcCCchHHHHHHHHHHHH
Confidence 221 2455555556655533221 1111110 1234567889999999999998 685 567899999
Q ss_pred HHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHhhc-
Q 005041 427 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST- 503 (717)
Q Consensus 427 LaaGN~vVlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a- 503 (717)
|++||+||+||||.||+++.++++++.+ + +|+|++|+|++ +++.+. +..||+||+|+||||+++|+.|++.+
T Consensus 151 LaaGN~vv~KPs~~tp~~~~~l~~~~~~----aGlP~gv~~~v~g~~~~~~~-l~~~~~v~~V~fTGs~~~G~~i~~~aa 225 (462)
T PRK13968 151 LLAGNGYLLKHAPNVMGCAQLIAQVFKD----AGIPQGVYGWLNADNDGVSQ-MINDSRIAAVTVTGSVRAGAAIGAQAG 225 (462)
T ss_pred HHcCCEEEEECCCcChHHHHHHHHHHHH----cCcCcCcEEEEecCchhhHH-HhcCCCCCEEEEECCHHHHHHHHHHHh
Confidence 9999999999999999999999999987 7 99999999996 444444 66789999999999999999999887
Q ss_pred --CCCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccChhhHHHHHHHHHHcCc-------
Q 005041 504 --KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------- 573 (717)
Q Consensus 504 --~~p~~lElGGk~p~iV~~dADl~~A~~~i~~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~------- 573 (717)
.||+++|||||||+||++|||+|.|++.+++++|.|+| .|+|++|+|||+++| |+|+++|+++++++.+
T Consensus 226 ~~l~~~~lElGGk~p~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-~~f~~~l~~~~~~~~~g~p~~~~ 304 (462)
T PRK13968 226 AALKKCVLELGGSDPFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIIEEGIA-SAFTERFVAAAAALKMGDPRDEE 304 (462)
T ss_pred hcCCcEEEecCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEECHhHH-HHHHHHHHHHHhcCCcCCCCCCC
Confidence 49999999999999999999999999999999999987 999999999999999 8999999999887632
Q ss_pred ---------------------------eE-ecCccc--cc-cc-c-C-----CCCccccccccCceEEEEEeCCHHHHHH
Q 005041 574 ---------------------------GL-FGGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAID 615 (717)
Q Consensus 574 ---------------------------~~-~g~~~~--~~-~~-p-i-----~~~~~~~eE~FGPVl~v~~~~~~deAi~ 615 (717)
++ +|+... .+ ++ | | ++|++++||+||||++|++|+|+||||+
T Consensus 305 ~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~d~~eai~ 384 (462)
T PRK13968 305 NALGPMARFDLRDELHHQVEATLAEGARLLLGGEKIAGAGNYYAPTVLANVTPEMTAFREELFGPVAAITVAKDAEHALE 384 (462)
T ss_pred CCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCceEECCEEEeCCCCCChHHhCCCcCCEEEEEEECCHHHHHH
Confidence 11 233321 13 33 5 2 3588999999999999999999999999
Q ss_pred HHHhcCCCceeEEEecCHHHHHHHHhcCCeeeEEEcCCCCCCCCCccCCccccccccCcccccccchhhcccEEEEEEec
Q 005041 616 HIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRG 695 (717)
Q Consensus 616 ~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v~~~ 695 (717)
++|+++|||++||||+|.+++.++++++++|.|+||+.....+..||||.+.||+| +++|++|+++||+.|+|.++
T Consensus 385 ~~n~~~~gLs~~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G----~~~G~~~l~~ft~~k~v~~~ 460 (462)
T PRK13968 385 LANDSEFGLSATIFTTDETQARQMAARLECGGVFINGYCASDARVAFGGVKKSGFG----RELSHFGLHEFCNIQTVWKD 460 (462)
T ss_pred HHhCCCCcceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCccccccC----cCchHHHHHHhcceeEEEEe
Confidence 99999999999999999999999999999999999988766667899999999986 35699999999999999764
No 16
>PRK09406 gabD1 succinic semialdehyde dehydrogenase; Reviewed
Probab=100.00 E-value=7e-75 Score=649.41 Aligned_cols=398 Identities=19% Similarity=0.199 Sum_probs=334.6
Q ss_pred HHHhcCCcceEEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhh
Q 005041 270 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 349 (717)
Q Consensus 270 ~~~~tg~~iGT~i~a~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~ 349 (717)
.+|.+++.++++..++ .+|+++++++|++||+.|+++|.++|.++|++++++|++|+++|++++++|+|++..
T Consensus 6 ~~P~t~~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~- 78 (457)
T PRK09406 6 INPATGETVKTFTALT------DDEVDAAIARAHARFRDYRTTTFAQRARWANAAADLLEAEADQVAALMTLEMGKTLA- 78 (457)
T ss_pred ECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHhcCCCHH-
Confidence 4688999999988888 899999999999999999999999999999999999999999999999888766532
Q ss_pred chhHHHHHHhhcChhHHHHHHHHHHHHhccccc-ccccccccccCCCceEEEeecceeEEEEEcCC-Cch-hHHHHHHHH
Q 005041 350 GYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 426 (717)
Q Consensus 350 g~~~a~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~A 426 (717)
++. .|+...++.+++++...+. .+..........+...+++++|+|||++|+|| ||. +.++++++|
T Consensus 79 ---~a~--------~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~PwN~Pl~~~~~~~~~A 147 (457)
T PRK09406 79 ---SAK--------AEALKCAKGFRYYAEHAEALLADEPADAAAVGASRAYVRYQPLGVVLAVMPWNFPLWQVVRFAAPA 147 (457)
T ss_pred ---HHH--------HHHHHHHHHHHHHHHHHHHHhCCccccccCCCCceEEEEEecceeEEEECCccchHHHHHHHHHHH
Confidence 221 2444455555554432211 11111000001223567889999999999998 785 567999999
Q ss_pred HHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecCCChhhhhhcCCCCccEEEeecCHHHHHHHHhhcC-
Q 005041 427 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK- 504 (717)
Q Consensus 427 LaaGN~vVlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a~- 504 (717)
|++||+||+|||+.||+++.++++++.+ + ||+|+||+|+++...+..|..||+|++|+||||+++|+.|++.++
T Consensus 148 LaaGN~VV~Kps~~~p~~~~~l~~l~~~----aGlP~gvv~~v~~g~~~~~~l~~~~~i~~V~fTGs~~~G~~i~~~a~~ 223 (457)
T PRK09406 148 LMAGNVGLLKHASNVPQTALYLADLFRR----AGFPDGCFQTLLVGSGAVEAILRDPRVAAATLTGSEPAGRAVAAIAGD 223 (457)
T ss_pred HHcCCEEEEECCCcCcHHHHHHHHHHHH----hCCCcCcEEEEcCCchhHHHHhcCCCcCEEEEECcHHHHHHHHHHHHh
Confidence 9999999999999999999999999987 7 999999999844334556678999999999999999999988763
Q ss_pred --CCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccChhhHHHHHHHHHHcCc--------
Q 005041 505 --IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV-------- 573 (717)
Q Consensus 505 --~p~~lElGGk~p~iV~~dADl~~A~~~i~~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~-------- 573 (717)
||+++|||||||+||++|||+|.|++.+++++|.|+| .|++++|+|||+++| |+|+++|+++++++.+
T Consensus 224 ~~~~~~lElGG~~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~l~~g~p~~~~~ 302 (457)
T PRK09406 224 EIKKTVLELGGSDPFIVMPSADLDRAAETAVTARVQNNGQSCIAAKRFIVHADVY-DAFAEKFVARMAALRVGDPTDPDT 302 (457)
T ss_pred cCCceeeecCCCCeeEECCCCCHHHHHHHHHHHHhhCCCCcccCCeEEEEcHHHH-HHHHHHHHHHHhhCCCCCCCCCCC
Confidence 8999999999999999999999999999999999987 999999999999999 8999999999987632
Q ss_pred --------------------------eE-ecCccc--ccc-c-c-C-----CCCccccccccCceEEEEEeCCHHHHHHH
Q 005041 574 --------------------------GL-FGGPRA--SKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDH 616 (717)
Q Consensus 574 --------------------------~~-~g~~~~--~~~-~-p-i-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~ 616 (717)
++ +|+.+. .++ + | | ++|++++||+||||++|++|+|+||||++
T Consensus 303 ~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~ 382 (457)
T PRK09406 303 DVGPLATEQGRDEVEKQVDDAVAAGATILCGGKRPDGPGWFYPPTVITDITPDMRLYTEEVFGPVASLYRVADIDEAIEI 382 (457)
T ss_pred CCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCceEccEEeecCCCCCHHhhCCCCCceEEEEeeCCHHHHHHH
Confidence 11 233321 233 3 5 2 35889999999999999999999999999
Q ss_pred HHhcCCCceeEEEecCHHHHHHHHhcCCeeeEEEcCCCCCCCCCccCCccccccccCcccccccchhhcccEEEEEEe
Q 005041 617 IHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILR 694 (717)
Q Consensus 617 aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v~~ 694 (717)
+|+++|||++||||+|.+++.++++++++|+|+||++....+..||||.+.||+| +++|.+|+++||+.|+|.+
T Consensus 383 ~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G----~~~g~~~l~~~t~~k~v~~ 456 (457)
T PRK09406 383 ANATTFGLGSNAWTRDEAEQERFIDDLEAGQVFINGMTVSYPELPFGGVKRSGYG----RELSAHGIREFCNIKTVWI 456 (457)
T ss_pred HhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCccccccC----ccchHHHHHHhhceEEEEe
Confidence 9999999999999999999999999999999999998777777999999999986 3468999999999999875
No 17
>PLN02278 succinic semialdehyde dehydrogenase
Probab=100.00 E-value=8.4e-75 Score=654.83 Aligned_cols=398 Identities=16% Similarity=0.179 Sum_probs=341.7
Q ss_pred HHHHhcCCcceEEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHh
Q 005041 269 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 348 (717)
Q Consensus 269 l~~~~tg~~iGT~i~a~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~ 348 (717)
..+|.+|+.++++..++ .+|+++++++|++||+.|+++|.++|.++|++++++|++|+++|++++++|+|++..
T Consensus 44 v~~P~tg~~i~~~~~~~------~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ 117 (498)
T PLN02278 44 VYNPATGEVIANVPCMG------RAETNDAIASAHDAFPSWSKLTASERSKILRRWYDLIIANKEDLAQLMTLEQGKPLK 117 (498)
T ss_pred EECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH
Confidence 47899999999988888 899999999999999999999999999999999999999999999999888765532
Q ss_pred hchhHHHHHHhhcChhHHHHHHHHHHHHhccccc-ccccccccccCCCceEEEeecceeEEEEEcCC-Cch-hHHHHHHH
Q 005041 349 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 425 (717)
Q Consensus 349 ~g~~~a~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ 425 (717)
++ ..|+..+++.+++++...+. .+...+.. ..+...+++|+|+|||++|+|| ||. +.+++++|
T Consensus 118 ----~a--------~~Ev~~~i~~~~~~~~~~~~~~g~~~~~~--~~~~~~~~~~~P~GvV~~I~PwN~P~~~~~~~i~~ 183 (498)
T PLN02278 118 ----EA--------IGEVAYGASFLEYFAEEAKRVYGDIIPSP--FPDRRLLVLKQPVGVVGAITPWNFPLAMITRKVGP 183 (498)
T ss_pred ----HH--------HHHHHHHHHHHHHHHHHHHHhcCcccccC--CCCceEEEEeecccEEEEECCCccHHHHHHHHHHH
Confidence 22 13566677777766654332 23222211 1233457789999999999998 785 56799999
Q ss_pred HHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHhhc
Q 005041 426 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST 503 (717)
Q Consensus 426 ALaaGN~vVlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a 503 (717)
||++||+||+|||+.||+++..+++++.+ + +|+|++|+|+| ++++++.|..||+||+|+||||+++|+.|++.+
T Consensus 184 ALaaGN~VVlKps~~tp~~~~~l~~~l~e----aglP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~a 259 (498)
T PLN02278 184 ALAAGCTVVVKPSELTPLTALAAAELALQ----AGIPPGVLNVVMGDAPEIGDALLASPKVRKITFTGSTAVGKKLMAGA 259 (498)
T ss_pred HHHcCCEEEEECCCCChHHHHHHHHHHHH----cCCCcccEEEEecCChhhHHHHhcCCCcCEEEEECcHHHHHHHHHHH
Confidence 99999999999999999999999999987 7 99999999996 556778888999999999999999999999877
Q ss_pred C---CCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccChhhHHHHHHHHHHcCc------
Q 005041 504 K---IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------ 573 (717)
Q Consensus 504 ~---~p~~lElGGk~p~iV~~dADl~~A~~~i~~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~------ 573 (717)
. ||+++|||||||+||++|||+|.|++.+++++|.|+| .|+|++|+|||+++| |+|+++|+++++++.+
T Consensus 260 a~~~~~~~lElGGk~~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~-~~f~~~L~~~~~~l~~G~p~~~ 338 (498)
T PLN02278 260 AATVKRVSLELGGNAPFIVFDDADLDVAVKGALASKFRNSGQTCVCANRILVQEGIY-DKFAEAFSKAVQKLVVGDGFEE 338 (498)
T ss_pred hhcCCcEEEecCCCCeeEECCCCCHHHHHHHHHHHHhccCCCCCcCCcEEEEeHHHH-HHHHHHHHHHHHhcCCCCCCCC
Confidence 3 8999999999999999999999999999999999987 999999999999999 8999999999887631
Q ss_pred ----------------------------eE-ecCccc--cc-cc-c-C-----CCCccccccccCceEEEEEeCCHHHHH
Q 005041 574 ----------------------------GL-FGGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAI 614 (717)
Q Consensus 574 ----------------------------~~-~g~~~~--~~-~~-p-i-----~~~~~~~eE~FGPVl~v~~~~~~deAi 614 (717)
++ +|+... .+ |+ | | ++|++++||+||||++|++|+|+||||
T Consensus 339 ~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~~~g~~~~Ptvl~~v~~~~~~~~~E~FGPVl~v~~~~~~deai 418 (498)
T PLN02278 339 GVTQGPLINEAAVQKVESHVQDAVSKGAKVLLGGKRHSLGGTFYEPTVLGDVTEDMLIFREEVFGPVAPLTRFKTEEEAI 418 (498)
T ss_pred CCcCCCccCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCceEeeEEEecCCCCChhhhCCCcCCEEEEEeeCCHHHHH
Confidence 11 233221 13 33 5 2 358899999999999999999999999
Q ss_pred HHHHhcCCCceeEEEecCHHHHHHHHhcCCeeeEEEcCCCCCCCCCccCCccccccccCcccccccchhhcccEEEEEEe
Q 005041 615 DHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILR 694 (717)
Q Consensus 615 ~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v~~ 694 (717)
+++|+++|||++||||+|.++++++++++++|.||||+.....+.+||||.+.||+| +++|++|+++||+.|+|.+
T Consensus 419 ~~~N~~~~gL~a~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G----~~~G~~~l~~ft~~k~i~~ 494 (498)
T PLN02278 419 AIANDTEAGLAAYIFTRDLQRAWRVSEALEYGIVGVNEGLISTEVAPFGGVKQSGLG----REGSKYGIDEYLEIKYVCL 494 (498)
T ss_pred HHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCcCCcccCcCC----ccchHHHHHHhheeEEEEE
Confidence 999999999999999999999999999999999999987665567899999999986 3569999999999999987
Q ss_pred c
Q 005041 695 G 695 (717)
Q Consensus 695 ~ 695 (717)
+
T Consensus 495 ~ 495 (498)
T PLN02278 495 G 495 (498)
T ss_pred e
Confidence 4
No 18
>cd07130 ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B. Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer.
Probab=100.00 E-value=7.1e-75 Score=653.20 Aligned_cols=402 Identities=18% Similarity=0.214 Sum_probs=340.1
Q ss_pred HHHHhcCCcceEEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHh
Q 005041 269 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 348 (717)
Q Consensus 269 l~~~~tg~~iGT~i~a~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~ 348 (717)
..+|.+++.++++..++ .+|+++++++|++||+.|+++|.++|.++|++++++|++|+++|++++.+|.+++..
T Consensus 16 ~~~P~t~~~i~~~~~~~------~~~v~~av~~a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ 89 (474)
T cd07130 16 SISPANGEPIARVRQAT------PEDYESTIKAAQEAFKEWRDVPAPKRGEIVRQIGDALRKKKEALGKLVSLEMGKILP 89 (474)
T ss_pred eECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHH
Confidence 35688999999988888 889999999999999999999999999999999999999999999998877765421
Q ss_pred hchhHHHHHHhhcChhHHHHHHHHHHHHhcccccc-cccccccccCCCceEEEeecceeEEEEEcCC-Cch-hHHHHHHH
Q 005041 349 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEPI-GQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 425 (717)
Q Consensus 349 ~g~~~a~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ 425 (717)
++ ..|+..+++.+++++...+.. +...+. . ..+...+++|+|+|||++|+|| ||. ++++++++
T Consensus 90 ----~a--------~~ev~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ 155 (474)
T cd07130 90 ----EG--------LGEVQEMIDICDFAVGLSRQLYGLTIPS-E-RPGHRMMEQWNPLGVVGVITAFNFPVAVWGWNAAI 155 (474)
T ss_pred ----HH--------HHHHHHHHHHHHHHHHhHHHhcCccccC-C-CCCceEEEEEecceeEEEEccCCCHHHHHHHHhhH
Confidence 22 124555555555555433221 222111 1 1233457789999999999998 695 56799999
Q ss_pred HHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecCCChhhhhhcCCCCccEEEeecCHHHHHHHHhhc-
Q 005041 426 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST- 503 (717)
Q Consensus 426 ALaaGN~vVlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a- 503 (717)
||++||+||+|||+.||+|+.++++++.+++.++ ||+|++|+|+|+.++++.|..||+||+|+||||+++|+.|++.+
T Consensus 156 ALaaGN~VvlKps~~~p~~~~~l~~l~~~~~~~aglP~gv~~~v~g~~~~~~~L~~~~~vd~V~fTGs~~~g~~i~~~aa 235 (474)
T cd07130 156 ALVCGNVVVWKPSPTTPLTAIAVTKIVARVLEKNGLPGAIASLVCGGADVGEALVKDPRVPLVSFTGSTAVGRQVGQAVA 235 (474)
T ss_pred HHHcCCeEEeeCCccCHHHHHHHHHHHHHHHHhcCCCCCcEEEEeCChhHHHHHhcCCCCCEEEEECchHHHHHHHHHHH
Confidence 9999999999999999999999999999888889 99999999997555788888999999999999999999998876
Q ss_pred --CCCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccChhhHHHHHHHHHHcCc-------
Q 005041 504 --KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------- 573 (717)
Q Consensus 504 --~~p~~lElGGk~p~iV~~dADl~~A~~~i~~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~------- 573 (717)
.+|+++|||||||+||++|||+|.|++.+++++|.|+| +|+|++|+|||+++| |+|+++|+++++++.+
T Consensus 236 ~~~~~~~lElGGk~p~iV~~dadl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~l~~g~p~~~~ 314 (474)
T cd07130 236 ARFGRSLLELGGNNAIIVMEDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESIY-DEVLERLKKAYKQVRIGDPLDDG 314 (474)
T ss_pred hcCCCEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCeEEEEcHhHH-HHHHHHHHHHHhcCCcCCCCCCC
Confidence 38999999999999999999999999999999999987 999999999999999 8999999999887531
Q ss_pred ---------------------------eE-ecCccc--cc-cc-c-C----CCCccccccccCceEEEEEeCCHHHHHHH
Q 005041 574 ---------------------------GL-FGGPRA--SK-LL-Q-I----PETRLFHHEYNSMVCTVEIVDDVRAAIDH 616 (717)
Q Consensus 574 ---------------------------~~-~g~~~~--~~-~~-p-i----~~~~~~~eE~FGPVl~v~~~~~~deAi~~ 616 (717)
++ .|+... .+ |+ | | ++|++++||+||||++|++|+|+||||++
T Consensus 315 ~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~~~~~~i~~eE~FGPvl~v~~~~~~~eai~~ 394 (474)
T cd07130 315 TLVGPLHTKAAVDNYLAAIEEAKSQGGTVLFGGKVIDGPGNYVEPTIVEGLSDAPIVKEETFAPILYVLKFDTLEEAIAW 394 (474)
T ss_pred CCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCCCeEEccEEEecCCCCHHHhCCCcCCeEEEEEeCCHHHHHHH
Confidence 11 233221 13 33 5 3 34889999999999999999999999999
Q ss_pred HHhcCCCceeEEEecCHHHHHHHHhc--CCeeeEEEcCCCCC-CCCCccCCccccccccCcccccccchhhcccEEEEEE
Q 005041 617 IHQHGSAHTDCIVAEDQKVAETFLCQ--VDSAAVFHNASTRF-CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 693 (717)
Q Consensus 617 aN~~~~GL~a~I~t~d~~~a~~~~~~--l~~G~v~iN~~~~~-~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v~ 693 (717)
+|+++|||++||||+|.+++++++++ +++|+|+||.++.. .+.+||||.|.||+| +++|++|+++||+.|++.
T Consensus 395 aN~~~~gL~a~v~t~d~~~a~~~~~~~~~~~g~v~iN~~~~~~~~~~PfgG~k~SG~G----~~~g~~~~~~f~~~k~~~ 470 (474)
T cd07130 395 NNEVPQGLSSSIFTTDLRNAFRWLGPKGSDCGIVNVNIGTSGAEIGGAFGGEKETGGG----RESGSDAWKQYMRRSTCT 470 (474)
T ss_pred HhCCCCCceEEEEcCCHHHHHHHHhhcCcceEEEEEcCCCCCCCCCCCcCccccccCC----ccchHHHHHHHhheEEEE
Confidence 99999999999999999999999987 99999999986543 467899999999986 356899999999999988
Q ss_pred ec
Q 005041 694 RG 695 (717)
Q Consensus 694 ~~ 695 (717)
++
T Consensus 471 ~~ 472 (474)
T cd07130 471 IN 472 (474)
T ss_pred Ee
Confidence 75
No 19
>cd07113 ALDH_PADH_NahF Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like. NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate.
Probab=100.00 E-value=8.9e-75 Score=653.38 Aligned_cols=401 Identities=15% Similarity=0.144 Sum_probs=338.6
Q ss_pred HHHHhcCCcceEEEecCCcccccHhhHHHHHHHHHHHHHH-HhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
Q 005041 269 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRR-LQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQ 347 (717)
Q Consensus 269 l~~~~tg~~iGT~i~a~~~~~~~~~~v~~av~~A~~A~~~-w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~ 347 (717)
..+|.+|+.++++..++ .+|+++++++|++||+. |+++|.++|.++|++++++|++++++|++++++|.|++.
T Consensus 19 ~~~P~tg~~i~~~~~~~------~~~v~~av~~A~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~ 92 (477)
T cd07113 19 ITNPATEQVIASVASAT------EADVDAAVASAWRAFVSAWAKTTPAERGRILLRLADLIEQHGEELAQLETLCSGKSI 92 (477)
T ss_pred eeCCCCCCEEEEEcCCC------HHHHHHHHHHHHHHhHhhhccCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHhcCCCH
Confidence 35688999999998888 89999999999999985 999999999999999999999999999999887776542
Q ss_pred hhchhHHHHHHhhcChhHHHHHHHHHHHHhccccc-ccccccccc---cCCCceEEEeecceeEEEEEcCC-Cch-hHHH
Q 005041 348 EAGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTE---LADGLILEKTSCPLGVLLIVFES-RPD-ALVQ 421 (717)
Q Consensus 348 ~~g~~~a~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~---~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~ 421 (717)
. ++.. .|+...++.++++++..+. .+...+... ...+...+++|+|+|||++|+|| ||. +.++
T Consensus 93 ~----~a~~-------~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~ 161 (477)
T cd07113 93 H----LSRA-------FEVGQSANFLRYFAGWATKINGETLAPSIPSMQGERYTAFTRREPVGVVAGIVPWNFSVMIAVW 161 (477)
T ss_pred H----HHHH-------HHHHHHHHHHHHHHHHHHHhcCcccccccccccCCCceEEEEEeecceEEEEcCCChHHHHHHH
Confidence 1 2111 2556666666666543322 222211100 01123467889999999999998 685 5779
Q ss_pred HHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecCCChhhhhhcCCCCccEEEeecCHHHHHHHH
Q 005041 422 IASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIK 500 (717)
Q Consensus 422 ~~~~ALaaGN~vVlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~ 500 (717)
+++|||++||+||+|||+.||+|+..+++++.+ + ||+|++|+|+|...+++.|..||+||+|+||||+++|+.|+
T Consensus 162 ~i~~ALaaGN~VvlKPs~~tp~~~~~l~~~~~~----aglP~gvv~~v~g~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~ 237 (477)
T cd07113 162 KIGAALATGCTIVIKPSEFTPLTLLRVAELAKE----AGIPDGVLNVVNGKGAVGAQLISHPDVAKVSFTGSVATGKKIG 237 (477)
T ss_pred HHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHH----cCcCCCcEEEEecCchHHHHHhcCCCCCEEEEECcHHHHHHHH
Confidence 999999999999999999999999999999987 7 99999999996333788888999999999999999999999
Q ss_pred hhc---CCCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccChhhHHHHHHHHHHcCc---
Q 005041 501 EST---KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV--- 573 (717)
Q Consensus 501 ~~a---~~p~~lElGGk~p~iV~~dADl~~A~~~i~~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~--- 573 (717)
+.+ .||+++|||||||+||++|||+|.|++.+++|+|.|+| +|+|++|+|||+++| |+|+++|+++++++.+
T Consensus 238 ~~aa~~~~~~~lElGGkn~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~g~p 316 (477)
T cd07113 238 RQAASDLTRVTLELGGKNAAAFLKDADIDWVVEGLLTAGFLHQGQVCAAPERFYVHRSKF-DELVTKLKQALSSFQVGSP 316 (477)
T ss_pred HHHHhhcCceEeecCCCCeeEECCCCCHHHHHHHHHHHHHhhCCCCCcCCcEEEECHHHH-HHHHHHHHHHHHhCCCCCC
Confidence 877 49999999999999999999999999999999999987 999999999999999 8999999999877531
Q ss_pred -------------------------------eE-ecCccc--cccc--c-C-----CCCccccccccCceEEEEEeCCHH
Q 005041 574 -------------------------------GL-FGGPRA--SKLL--Q-I-----PETRLFHHEYNSMVCTVEIVDDVR 611 (717)
Q Consensus 574 -------------------------------~~-~g~~~~--~~~~--p-i-----~~~~~~~eE~FGPVl~v~~~~~~d 611 (717)
++ .|+.+. .++| | | ++|++++||+||||++|++|+|+|
T Consensus 317 ~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~l~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~d 396 (477)
T cd07113 317 MDESVMFGPLANQPHFDKVCSYLDDARAEGDEIVRGGEALAGEGYFVQPTLVLARSADSRLMREETFGPVVSFVPYEDEE 396 (477)
T ss_pred CCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCeeEeCEEEecCCCCChHHhCCCCCCeEEEEEeCCHH
Confidence 12 244322 2433 6 2 368999999999999999999999
Q ss_pred HHHHHHHhcCCCceeEEEecCHHHHHHHHhcCCeeeEEEcCCCCCCCCCccCCccccccccCcccccccchhhcccEEEE
Q 005041 612 AAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRW 691 (717)
Q Consensus 612 eAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~ 691 (717)
|||+++|+++|||++||||+|.++++++++++++|+|+||.++...+..||||.+.||+| +++|.+|+++||+.|+
T Consensus 397 eai~~~n~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G----~~~g~~~l~~~t~~k~ 472 (477)
T cd07113 397 ELIQLINDTPFGLTASVWTNNLSKALRYIPRIEAGTVWVNMHTFLDPAVPFGGMKQSGIG----REFGSAFIDDYTELKS 472 (477)
T ss_pred HHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccCC----ccchHHHHHHhhceEE
Confidence 999999999999999999999999999999999999999987666677899999999986 3568999999999999
Q ss_pred EEec
Q 005041 692 ILRG 695 (717)
Q Consensus 692 v~~~ 695 (717)
|.++
T Consensus 473 v~~~ 476 (477)
T cd07113 473 VMIR 476 (477)
T ss_pred EEEe
Confidence 9764
No 20
>PLN02466 aldehyde dehydrogenase family 2 member
Probab=100.00 E-value=7.7e-75 Score=657.55 Aligned_cols=398 Identities=17% Similarity=0.187 Sum_probs=339.6
Q ss_pred HHHhcCCcceEEEecCCcccccHhhHHHHHHHHHHHHHH--HhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
Q 005041 270 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRR--LQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQ 347 (717)
Q Consensus 270 ~~~~tg~~iGT~i~a~~~~~~~~~~v~~av~~A~~A~~~--w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~ 347 (717)
.+|.+++.++++..++ .+|+++|+++|++||+. |++++.++|.++|++++++|++|+++|++++++|.+|+.
T Consensus 78 ~~P~tg~~i~~v~~~~------~~dv~~Av~aA~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~GK~~ 151 (538)
T PLN02466 78 LDPRTGEVIAHVAEGD------AEDVNRAVAAARKAFDEGPWPKMTAYERSRILLRFADLLEKHNDELAALETWDNGKPY 151 (538)
T ss_pred ECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHcCcCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH
Confidence 5678999999998888 89999999999999984 999999999999999999999999999999888776542
Q ss_pred hhchhHHHHHHhhcChhHHHHHHHHHHHHhccccc-ccccccccccCCCceEEEeecceeEEEEEcCC-Cch-hHHHHHH
Q 005041 348 EAGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIAS 424 (717)
Q Consensus 348 ~~g~~~a~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~ 424 (717)
. ++. ..|+...++.+++++...+. .+...+. ..+...+++++|+|||++|+|| ||. +.+++++
T Consensus 152 ~----~a~-------~~Ev~~~~~~l~~~a~~~~~~~g~~~~~---~~~~~~~~~~~P~GVV~~I~PwN~P~~l~~~~i~ 217 (538)
T PLN02466 152 E----QSA-------KAELPMFARLFRYYAGWADKIHGLTVPA---DGPHHVQTLHEPIGVAGQIIPWNFPLLMFAWKVG 217 (538)
T ss_pred H----HHH-------HHHHHHHHHHHHHHHHHHHHhcCccccc---CCCceEEEEEecceEEEEECCCchHHHHHHHHHh
Confidence 2 221 13566677777777654332 2322221 1223457889999999999998 686 5679999
Q ss_pred HHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHhh
Q 005041 425 LAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKES 502 (717)
Q Consensus 425 ~ALaaGN~vVlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~ 502 (717)
|||++||+||+|||+.||+|+.++++++++ + ||+|+||+|+| ++++++.|..||+||+|+||||+++|+.|++.
T Consensus 218 pALaaGN~VVlKPs~~tp~~~~~l~~ll~e----aGlP~gvv~vv~g~~~~~~~~L~~~~~vd~V~FTGS~~~G~~v~~~ 293 (538)
T PLN02466 218 PALACGNTIVLKTAEQTPLSALYAAKLLHE----AGLPPGVLNVVSGFGPTAGAALASHMDVDKLAFTGSTDTGKIVLEL 293 (538)
T ss_pred HHHHcCCEEEeECCCCCcHHHHHHHHHHHh----cCCCcccEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHH
Confidence 999999999999999999999999999987 7 99999999996 56778889999999999999999999999876
Q ss_pred cC----CCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccChhhHHHHHHHHHHcCc----
Q 005041 503 TK----IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV---- 573 (717)
Q Consensus 503 a~----~p~~lElGGk~p~iV~~dADl~~A~~~i~~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~---- 573 (717)
+. ||+++|||||||+||++|||+|.|++.+++++|.|+| +|+|++|+|||+++| |+|+++|++++.++.+
T Consensus 294 aa~~~l~pv~lElGGknp~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~vG~p~ 372 (538)
T PLN02466 294 AAKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHERVY-DEFVEKAKARALKRVVGDPF 372 (538)
T ss_pred HHhcCCCcEEEEcCCCCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCcCcEEEEcHHHH-HHHHHHHHHHHHhccCCCCc
Confidence 63 7999999999999999999999999999999999987 999999999999999 8999999987765421
Q ss_pred ------------------------------eE-ecCccc--cc-cc-c-C-----CCCccccccccCceEEEEEeCCHHH
Q 005041 574 ------------------------------GL-FGGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRA 612 (717)
Q Consensus 574 ------------------------------~~-~g~~~~--~~-~~-p-i-----~~~~~~~eE~FGPVl~v~~~~~~de 612 (717)
++ +|+... .+ |+ | | ++|++++||+||||++|++|+|+||
T Consensus 373 ~~~~~~Gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~g~~i~Ptvl~~v~~d~~i~~eE~FGPVl~v~~~~d~de 452 (538)
T PLN02466 373 KKGVEQGPQIDSEQFEKILRYIKSGVESGATLECGGDRFGSKGYYIQPTVFSNVQDDMLIAQDEIFGPVQSILKFKDLDE 452 (538)
T ss_pred cCCCCCccCCCHHHHHHHHHHHHHHHHCCCEEEecCCcCCCCceEEEEEEEecCCCCCchhcCCccCcEEEEEEeCCHHH
Confidence 11 233221 13 33 5 2 3689999999999999999999999
Q ss_pred HHHHHHhcCCCceeEEEecCHHHHHHHHhcCCeeeEEEcCCCCCCCCCccCCccccccccCcccccccchhhcccEEEEE
Q 005041 613 AIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWI 692 (717)
Q Consensus 613 Ai~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v 692 (717)
||+++|+++|||++||||+|.+++.++++++++|+|+||+.....+..||||.+.||+| +++|++|+++||+.|+|
T Consensus 453 Ai~~aN~~~~GL~a~VfT~d~~~a~~~~~~l~aG~v~IN~~~~~~~~~PfGG~k~SG~G----~~~G~~gl~~ft~~k~v 528 (538)
T PLN02466 453 VIRRANNTRYGLAAGVFTQNLDTANTLSRALRVGTVWVNCFDVFDAAIPFGGYKMSGIG----REKGIYSLNNYLQVKAV 528 (538)
T ss_pred HHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCcCCCCcCccC----cccHHHHHHHhcceEEE
Confidence 99999999999999999999999999999999999999987666677899999999986 35699999999999999
Q ss_pred EecC
Q 005041 693 LRGN 696 (717)
Q Consensus 693 ~~~~ 696 (717)
++..
T Consensus 529 ~~~~ 532 (538)
T PLN02466 529 VTPL 532 (538)
T ss_pred EEeC
Confidence 8753
No 21
>cd07559 ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like. Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences.
Probab=100.00 E-value=1.5e-74 Score=651.14 Aligned_cols=398 Identities=19% Similarity=0.176 Sum_probs=342.0
Q ss_pred HHHHhcCCcceEEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHh
Q 005041 269 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 348 (717)
Q Consensus 269 l~~~~tg~~iGT~i~a~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~ 348 (717)
..+|.+++.++++..++ .+|+++++++|++||++|+++|.++|.++|++++++|++|+++|++++++|.+|+.
T Consensus 20 v~~P~t~~~~~~~~~~~------~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~- 92 (480)
T cd07559 20 NYNPVNGKVLCEIPRST------AEDVDLAVDAAHEAFKTWGKTSVAERANILNKIADRIEENLELLAVAETLDNGKPI- 92 (480)
T ss_pred eeCCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCH-
Confidence 35688999999988888 89999999999999999999999999999999999999999999999887765542
Q ss_pred hchhHHHHHHhhcChhHHHHHHHHHHHHhccccc-ccccccccccCCCceEEEeecceeEEEEEcCC-Cch-hHHHHHHH
Q 005041 349 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 425 (717)
Q Consensus 349 ~g~~~a~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ 425 (717)
.++. ..++..+++.++++++..+. .+...+. +.+...+++++|+|||++|+|| ||. +.+++++|
T Consensus 93 ---~~a~-------~~ev~~~~~~~~~~a~~~~~~~~~~~~~---~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~i~~ 159 (480)
T cd07559 93 ---RETL-------AADIPLAIDHFRYFAGVIRAQEGSLSEI---DEDTLSYHFHEPLGVVGQIIPWNFPLLMAAWKLAP 159 (480)
T ss_pred ---HHHH-------HHHHHHHHHHHHHHHHHHHHhcCccccC---CCCceeEEEEeccceEEEECCCchHHHHHHHHHHH
Confidence 1221 13566777777777654332 1222111 1344567889999999999998 685 56799999
Q ss_pred HHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccccCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHhhcC
Q 005041 426 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDTVGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK 504 (717)
Q Consensus 426 ALaaGN~vVlKps~~tp~t~~~l~~~~~~al~~alP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a~ 504 (717)
||++||+||+|||+.||+|+..+++++.+ ++|+|++|+|+| +.++++.|..||+||+|+||||+.+|+.|++.+.
T Consensus 160 ALaaGN~VV~KPs~~tp~~~~~l~~l~~~----~lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~aa 235 (480)
T cd07559 160 ALAAGNTVVLKPASQTPLSILVLMELIGD----LLPKGVVNVVTGFGSEAGKPLASHPRIAKLAFTGSTTVGRLIMQYAA 235 (480)
T ss_pred HHHcCCEEEEECchhhhHHHHHHHHHHHH----hCCcCeEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHh
Confidence 99999999999999999999999999986 499999999996 5678888999999999999999999999998773
Q ss_pred ---CCEEEecCCcceEEEcCCC-----CHHHHHHHHHhhccCCCc-cccccceEEEcCcccChhhHHHHHHHHHHcCc--
Q 005041 505 ---IPVLGHADGICHVYVDKSA-----NLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV-- 573 (717)
Q Consensus 505 ---~p~~lElGGk~p~iV~~dA-----Dl~~A~~~i~~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~-- 573 (717)
||+++|||||||+||++|| |+|.|++.+++++|.|+| .|++++|||||+++| |+|+++|+++++++++
T Consensus 236 ~~~~p~~lElGGk~p~iV~~dA~~~~~Dl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~l~~G~ 314 (480)
T cd07559 236 ENLIPVTLELGGKSPNIFFDDAMDADDDFDDKAEEGQLGFAFNQGEVCTCPSRALVQESIY-DEFIERAVERFEAIKVGN 314 (480)
T ss_pred ccCCcEEeccCCCCeEEEcCCccccccCHHHHHHHHHHHHHhhCCCCCCCCeEEEEcHHHH-HHHHHHHHHHHHhCCCCC
Confidence 8999999999999999999 999999999999999987 999999999999999 8999999999887632
Q ss_pred --------------------------------eE-ecCccc------ccc-c-c-C-----CCCccccccccCceEEEEE
Q 005041 574 --------------------------------GL-FGGPRA------SKL-L-Q-I-----PETRLFHHEYNSMVCTVEI 606 (717)
Q Consensus 574 --------------------------------~~-~g~~~~------~~~-~-p-i-----~~~~~~~eE~FGPVl~v~~ 606 (717)
++ .|+.+. .++ + | | ++|++++||+||||++|++
T Consensus 315 p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~ 394 (480)
T cd07559 315 PLDPETMMGAQVSKDQLEKILSYVDIGKEEGAEVLTGGERLTLGGLDKGYFYEPTLIKGGNNDMRIFQEEIFGPVLAVIT 394 (480)
T ss_pred CCCCCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCccccCCCCcEECeEEEeCCCCCCcHHhcCCcCceEEEEe
Confidence 11 233221 133 3 5 2 3588999999999999999
Q ss_pred eCCHHHHHHHHHhcCCCceeEEEecCHHHHHHHHhcCCeeeEEEcCCCCCCCCCccCCccccccccCcccccccchhhcc
Q 005041 607 VDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGL 686 (717)
Q Consensus 607 ~~~~deAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~f 686 (717)
|+|+||||+++|+++|||++||||+|.+++.++++++++|+|+||++....+..||||.|.||+| +++|.+|+++|
T Consensus 395 ~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~a~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G----~~~g~~~~~~~ 470 (480)
T cd07559 395 FKDEEEAIAIANDTEYGLGGGVWTRDINRALRVARGIQTGRVWVNCYHQYPAHAPFGGYKKSGIG----RETHKMMLDHY 470 (480)
T ss_pred eCCHHHHHHHHhCCCCCCeEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCCccCcCC----ccChHHHHHHh
Confidence 99999999999999999999999999999999999999999999987766678999999999986 34689999999
Q ss_pred cEEEEEEec
Q 005041 687 LTTRWILRG 695 (717)
Q Consensus 687 t~~k~v~~~ 695 (717)
|+.|+++++
T Consensus 471 ~~~k~v~~~ 479 (480)
T cd07559 471 QQTKNILVS 479 (480)
T ss_pred hceEEEEEe
Confidence 999999874
No 22
>cd07086 ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins. ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105).
Probab=100.00 E-value=2.2e-74 Score=650.37 Aligned_cols=402 Identities=20% Similarity=0.233 Sum_probs=344.3
Q ss_pred HHHHhcCCcceEEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHh
Q 005041 269 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 348 (717)
Q Consensus 269 l~~~~tg~~iGT~i~a~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~ 348 (717)
..+|.+|+.++++..++ .+|+++++++|++||+.|+++|.++|.++|++++++|++|+++|++++++|++++..
T Consensus 17 ~~~P~tg~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ 90 (478)
T cd07086 17 SRNPANGEPIARVFPAS------PEDVEAAVAAAREAFKEWRKVPAPRRGEIVRQIGEALRKKKEALGRLVSLEMGKILP 90 (478)
T ss_pred eECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHH
Confidence 35688999999999888 889999999999999999999999999999999999999999999998877655421
Q ss_pred hchhHHHHHHhhcChhHHHHHHHHHHHHhccccc-ccccccccccCCCceEEEeecceeEEEEEcCC-Cch-hHHHHHHH
Q 005041 349 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 425 (717)
Q Consensus 349 ~g~~~a~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ 425 (717)
++ ..++..+++.+++++...+. .+...+. . ..+...+++|+|+|||++|+|| ||. ++++++++
T Consensus 91 ----~a--------~~ev~~~~~~~~~~a~~~~~~~g~~~~~-~-~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~~~~ 156 (478)
T cd07086 91 ----EG--------LGEVQEMIDICDYAVGLSRMLYGLTIPS-E-RPGHRLMEQWNPLGVVGVITAFNFPVAVPGWNAAI 156 (478)
T ss_pred ----HH--------HHHHHHHHHHHHHHHHHHHHhcCccccc-C-CCCceEEEEEecceeEEEECCCCcHHHHHHHHHHH
Confidence 21 23566666666666544322 2222221 1 1233567889999999999998 796 67899999
Q ss_pred HHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecCCChhhhhhcCCCCccEEEeecCHHHHHHHHhhc-
Q 005041 426 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST- 503 (717)
Q Consensus 426 ALaaGN~vVlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a- 503 (717)
||++||+||+|||+.||+|+..++++++++|+++ +|+|++|+|++...++++|..||+||+|+||||+++|+.|++.+
T Consensus 157 ALaaGN~VIlKps~~~p~~~~~l~~~~~~al~~~glP~gvv~~v~g~~~~~~~L~~~~~vd~v~fTGs~~~g~~i~~~aa 236 (478)
T cd07086 157 ALVCGNTVVWKPSETTPLTAIAVTKILAEVLEKNGLPPGVVNLVTGGGDGGELLVHDPRVPLVSFTGSTEVGRRVGETVA 236 (478)
T ss_pred HHHcCCeEEEECCCcchHHHHHHHHHHHHhhhccCCCccceEEEecCchhHHHHhcCCCCCEEEEECcHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999 99999999996444889999999999999999999999998876
Q ss_pred --CCCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccChhhHHHHHHHHHHcCc-------
Q 005041 504 --KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------- 573 (717)
Q Consensus 504 --~~p~~lElGGk~p~iV~~dADl~~A~~~i~~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~------- 573 (717)
.+|+++|||||||+||++|||++.|++.+++|+|.|+| +|+|++|||||+++| |+|+++|+++++++.+
T Consensus 237 ~~~~~~~lElGG~~p~iV~~dAdl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~g~p~~~~ 315 (478)
T cd07086 237 RRFGRVLLELGGNNAIIVMDDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESVY-DEFLERLVKAYKQVRIGDPLDEG 315 (478)
T ss_pred ccCCcEEeecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCCCcCCeEEEEcHHHH-HHHHHHHHHHHHhCCcCCCCCCC
Confidence 48999999999999999999999999999999999987 999999999999999 8999999999987532
Q ss_pred ---------------------------eEe-cCccc----cc-cc-c-C-----CCCccccccccCceEEEEEeCCHHHH
Q 005041 574 ---------------------------GLF-GGPRA----SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAA 613 (717)
Q Consensus 574 ---------------------------~~~-g~~~~----~~-~~-p-i-----~~~~~~~eE~FGPVl~v~~~~~~deA 613 (717)
++. |+... .+ |+ | | ++|++++||+||||++|++|+|+|||
T Consensus 316 ~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPVl~v~~~~~~dea 395 (478)
T cd07086 316 TLVGPLINQAAVEKYLNAIEIAKSQGGTVLTGGKRIDGGEPGNYVEPTIVTGVTDDARIVQEETFAPILYVIKFDSLEEA 395 (478)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCeEEccEEecCCCCCChhhcCCCcCCEEEEEEeCCHHHH
Confidence 222 44322 13 33 5 2 35899999999999999999999999
Q ss_pred HHHHHhcCCCceeEEEecCHHHHHHHHhc--CCeeeEEEcCCCCC-CCCCccCCccccccccCcccccccchhhcccEEE
Q 005041 614 IDHIHQHGSAHTDCIVAEDQKVAETFLCQ--VDSAAVFHNASTRF-CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTR 690 (717)
Q Consensus 614 i~~aN~~~~GL~a~I~t~d~~~a~~~~~~--l~~G~v~iN~~~~~-~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k 690 (717)
|+++|+++|||++||||+|.+++++++++ +++|+|+||+++.. .+.+||||.+.||+| +++|.+|+++|++.|
T Consensus 396 i~~~n~~~~gL~a~v~t~d~~~a~~~~~~~~~~~G~v~iN~~~~~~~~~~PfgG~~~SG~G----~~~g~~~~~~f~~~k 471 (478)
T cd07086 396 IAINNDVPQGLSSSIFTEDLREAFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKETGGG----RESGSDAWKQYMRRS 471 (478)
T ss_pred HHHHhCCCCcceEEEEcCCHHHHHHHHhcCcccceeEEECCCCCCCCCCCCCCCcccccCC----ccchHHHHHHhhceE
Confidence 99999999999999999999999999999 99999999997654 467899999999986 246899999999999
Q ss_pred EEEec
Q 005041 691 WILRG 695 (717)
Q Consensus 691 ~v~~~ 695 (717)
+|+++
T Consensus 472 ~i~~~ 476 (478)
T cd07086 472 TCTIN 476 (478)
T ss_pred EEEEe
Confidence 99875
No 23
>cd07117 ALDH_StaphAldA1 Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like. Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD.
Probab=100.00 E-value=2.6e-74 Score=647.83 Aligned_cols=398 Identities=17% Similarity=0.179 Sum_probs=342.0
Q ss_pred HHHHhcCCcceEEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHh
Q 005041 269 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 348 (717)
Q Consensus 269 l~~~~tg~~iGT~i~a~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~ 348 (717)
..+|.+++.++++..++ .+|+++++++|++||+.|+++|.++|.++|++++++|++|+++|++++++|+||+.
T Consensus 20 ~~nP~t~~~i~~~~~~~------~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~- 92 (475)
T cd07117 20 SYNPANGETLSEITDAT------DADVDRAVKAAQEAFKTWRKTTVAERANILNKIADIIDENKELLAMVETLDNGKPI- 92 (475)
T ss_pred eECCCCCCEEEEEcCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHcCCCH-
Confidence 35788999999998888 89999999999999999999999999999999999999999999999887765542
Q ss_pred hchhHHHHHHhhcChhHHHHHHHHHHHHhccccc-ccccccccccCCCceEEEeecceeEEEEEcCC-Cch-hHHHHHHH
Q 005041 349 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 425 (717)
Q Consensus 349 ~g~~~a~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ 425 (717)
.++. ..|+..+++.+++|+...+. .+...+. ..+...+++|+|+|||++|+|| ||. +.+++++|
T Consensus 93 ---~~a~-------~~ev~~~i~~l~~~a~~~~~~~~~~~~~---~~~~~~~~~~~P~GVV~~I~PwN~Pl~~~~~~i~~ 159 (475)
T cd07117 93 ---RETR-------AVDIPLAADHFRYFAGVIRAEEGSANMI---DEDTLSIVLREPIGVVGQIIPWNFPFLMAAWKLAP 159 (475)
T ss_pred ---HHHH-------HHHHHHHHHHHHHHHHHHHHhcCccccc---CCCceeEEEEeecceEEEECCCccHHHHHHHHHHH
Confidence 1221 12677788888887754332 2322111 1233467889999999999998 685 56799999
Q ss_pred HHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccccCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHhhc-
Q 005041 426 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDTVGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST- 503 (717)
Q Consensus 426 ALaaGN~vVlKps~~tp~t~~~l~~~~~~al~~alP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a- 503 (717)
||++||+||+|||+.||+|+..+++++.+ +||+|++|+|+| +.++++.|..||+||+|+||||+++|+.|++.+
T Consensus 160 AL~aGN~VvlKPs~~~p~~~~~l~~~~~~----~lP~g~~~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa 235 (475)
T cd07117 160 ALAAGNTVVIKPSSTTSLSLLELAKIIQD----VLPKGVVNIVTGKGSKSGEYLLNHPGLDKLAFTGSTEVGRDVAIAAA 235 (475)
T ss_pred HHHcCCEEEEECCccCcHHHHHHHHHHHH----hCCcCcEEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHh
Confidence 99999999999999999999999999986 499999999996 566788888999999999999999999998876
Q ss_pred --CCCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccChhhHHHHHHHHHHcCc-------
Q 005041 504 --KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------- 573 (717)
Q Consensus 504 --~~p~~lElGGk~p~iV~~dADl~~A~~~i~~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~------- 573 (717)
.+|+++|||||||+||++|||++.|++.+++++|.|+| +|+|++|||||+++| |+|+++|+++++++.+
T Consensus 236 ~~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~l~~g~p~~~~ 314 (475)
T cd07117 236 KKLIPATLELGGKSANIIFDDANWDKALEGAQLGILFNQGQVCCAGSRIFVQEGIY-DEFVAKLKEKFENVKVGNPLDPD 314 (475)
T ss_pred ccCCcEEEeCCCCCeEEECCCCChHHHHHHHHHHHhhccCCCCCCCeEEEEeHHHH-HHHHHHHHHHHHhccCCCCCCCC
Confidence 38999999999999999999999999999999999987 999999999999999 8999999999887531
Q ss_pred ---------------------------eE-ecCccc------cc-cc-c-C-----CCCccccccccCceEEEEEeCCHH
Q 005041 574 ---------------------------GL-FGGPRA------SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVR 611 (717)
Q Consensus 574 ---------------------------~~-~g~~~~------~~-~~-p-i-----~~~~~~~eE~FGPVl~v~~~~~~d 611 (717)
++ .|+... .+ |+ | | ++|++++||+||||++|++|+|+|
T Consensus 315 ~~~gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~ 394 (475)
T cd07117 315 TQMGAQVNKDQLDKILSYVDIAKEEGAKILTGGHRLTENGLDKGFFIEPTLIVNVTNDMRVAQEEIFGPVATVIKFKTED 394 (475)
T ss_pred CcccCcCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCccccCCCCeEEeeEEeecCCCCChhhhCCCcCCeEEEEEECCHH
Confidence 12 233221 13 33 5 2 358899999999999999999999
Q ss_pred HHHHHHHhcCCCceeEEEecCHHHHHHHHhcCCeeeEEEcCCCCCCCCCccCCccccccccCcccccccchhhcccEEEE
Q 005041 612 AAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRW 691 (717)
Q Consensus 612 eAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~ 691 (717)
|||+++|+++|||++||||+|.+++.++++++++|+|+||++....+.+||||.+.||+| +++|.+|+++||+.|+
T Consensus 395 eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G----~~~g~~~~~~ft~~k~ 470 (475)
T cd07117 395 EVIDMANDSEYGLGGGVFTKDINRALRVARAVETGRVWVNTYNQIPAGAPFGGYKKSGIG----RETHKSMLDAYTQMKN 470 (475)
T ss_pred HHHHHHhCCCcCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccCcCC----CCchHHHHHHHhCeEE
Confidence 999999999999999999999999999999999999999997766678899999999986 3569999999999999
Q ss_pred EEec
Q 005041 692 ILRG 695 (717)
Q Consensus 692 v~~~ 695 (717)
+++.
T Consensus 471 v~~~ 474 (475)
T cd07117 471 IYID 474 (475)
T ss_pred EEEe
Confidence 8763
No 24
>cd07116 ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like. Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression.
Probab=100.00 E-value=3.4e-74 Score=649.00 Aligned_cols=397 Identities=18% Similarity=0.162 Sum_probs=338.8
Q ss_pred HHHHhcCCcceEEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHh
Q 005041 269 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 348 (717)
Q Consensus 269 l~~~~tg~~iGT~i~a~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~ 348 (717)
..+|.+|+.++++..++ .+|+++++++|++||+.|+++|..+|.++|++++++|++|+++|+++++.|.+|+.
T Consensus 20 v~nP~tg~~i~~~~~~~------~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~- 92 (479)
T cd07116 20 NITPVTGKVFCEVPRST------AEDIELALDAAHAAKEAWGKTSVAERANILNKIADRMEANLEMLAVAETWDNGKPV- 92 (479)
T ss_pred eECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH-
Confidence 36788999999988888 89999999999999999999999999999999999999999999999887765442
Q ss_pred hchhHHHHHHhhcChhHHHHHHHHHHHHhccccc-ccccccccccCCCceEEEeecceeEEEEEcCC-Cch-hHHHHHHH
Q 005041 349 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 425 (717)
Q Consensus 349 ~g~~~a~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ 425 (717)
.++. ..|+..+++.+++++...+. .+...+. ..+...+++++|+|||++|+|| ||. +.+++++|
T Consensus 93 ---~~a~-------~~ev~~~~~~~~~~a~~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ 159 (479)
T cd07116 93 ---RETL-------AADIPLAIDHFRYFAGCIRAQEGSISEI---DENTVAYHFHEPLGVVGQIIPWNFPLLMATWKLAP 159 (479)
T ss_pred ---HHHH-------HHHHHHHHHHHHHHHHhHHHcCCeeecC---CCCceEEEEEeccceEEEECCCchHHHHHHHHHHH
Confidence 1221 13677788888887754432 2222111 1234567889999999999998 686 55699999
Q ss_pred HHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccccCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHhhc-
Q 005041 426 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDTVGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST- 503 (717)
Q Consensus 426 ALaaGN~vVlKps~~tp~t~~~l~~~~~~al~~alP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a- 503 (717)
||++||+||+|||+.||+|+..+++++++ +||+|++|+|+| +.++++.|..||+||+|+||||+++|+.|++.+
T Consensus 160 ALaaGN~VV~KPs~~tp~~~~~l~~l~~~----alP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa 235 (479)
T cd07116 160 ALAAGNCVVLKPAEQTPASILVLMELIGD----LLPPGVVNVVNGFGLEAGKPLASSKRIAKVAFTGETTTGRLIMQYAS 235 (479)
T ss_pred HHHcCCEEEEECCCCChHHHHHHHHHHHH----HCCcCcEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHH
Confidence 99999999999999999999999999986 499999999996 566788888999999999999999999998877
Q ss_pred --CCCEEEecCCcceEEEcCC------CCHHHHHHHHHhhccCCCc-cccccceEEEcCcccChhhHHHHHHHHHHcCc-
Q 005041 504 --KIPVLGHADGICHVYVDKS------ANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV- 573 (717)
Q Consensus 504 --~~p~~lElGGk~p~iV~~d------ADl~~A~~~i~~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~- 573 (717)
.+|+++|||||||+||++| ||+|.|++.++++.| |+| +|+|++|||||+++| |+|+++|+++++++.+
T Consensus 236 ~~~~p~~lElGGk~p~iV~~da~~~~~adl~~A~~~i~~~~~-~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~l~~G 313 (479)
T cd07116 236 ENIIPVTLELGGKSPNIFFADVMDADDAFFDKALEGFVMFAL-NQGEVCTCPSRALIQESIY-DRFMERALERVKAIKQG 313 (479)
T ss_pred cCCCeEEEECCCCCeEEEecCcccccccCHHHHHHHHHHHHh-cCCCCCCCCeEEEEcHHHH-HHHHHHHHHHHHhcCCC
Confidence 3899999999999999988 799999999998765 655 999999999999999 8999999999887521
Q ss_pred ---------------------------------eE-ecCccc------ccc-c-c-C----CCCccccccccCceEEEEE
Q 005041 574 ---------------------------------GL-FGGPRA------SKL-L-Q-I----PETRLFHHEYNSMVCTVEI 606 (717)
Q Consensus 574 ---------------------------------~~-~g~~~~------~~~-~-p-i----~~~~~~~eE~FGPVl~v~~ 606 (717)
++ .|+... .++ + | | ++|++++||+||||++|++
T Consensus 314 ~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~eE~FGPVl~v~~ 393 (479)
T cd07116 314 NPLDTETMIGAQASLEQLEKILSYIDIGKEEGAEVLTGGERNELGGLLGGGYYVPTTFKGGNKMRIFQEEIFGPVLAVTT 393 (479)
T ss_pred CCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCCCeeecCeEEccCCCChhhhcCCcCceEEEEE
Confidence 22 243221 233 3 5 2 4689999999999999999
Q ss_pred eCCHHHHHHHHHhcCCCceeEEEecCHHHHHHHHhcCCeeeEEEcCCCCCCCCCccCCccccccccCcccccccchhhcc
Q 005041 607 VDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGL 686 (717)
Q Consensus 607 ~~~~deAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~f 686 (717)
|+|+||||+++|+++|||++||||+|.+++.++++++++|+|+||++....+..||||.+.||+| +++|.+|+++|
T Consensus 394 ~~~~~eai~~aN~~~~gLsa~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G----~~~g~~~l~~~ 469 (479)
T cd07116 394 FKDEEEALEIANDTLYGLGAGVWTRDGNTAYRMGRGIQAGRVWTNCYHLYPAHAAFGGYKQSGIG----RENHKMMLDHY 469 (479)
T ss_pred eCCHHHHHHHHhCCcccceEEEEcCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCcCCCccCcCC----ccChHHHHHHh
Confidence 99999999999999999999999999999999999999999999987766677899999999986 35689999999
Q ss_pred cEEEEEEec
Q 005041 687 LTTRWILRG 695 (717)
Q Consensus 687 t~~k~v~~~ 695 (717)
|+.|+++++
T Consensus 470 ~~~k~~~~~ 478 (479)
T cd07116 470 QQTKNLLVS 478 (479)
T ss_pred hceEEEEEe
Confidence 999999774
No 25
>TIGR03216 OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehydrogenase. Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation.
Probab=100.00 E-value=3.1e-74 Score=649.58 Aligned_cols=401 Identities=17% Similarity=0.186 Sum_probs=340.2
Q ss_pred HHHHhcCCcceEEEecCCcccccHhhHHHHHHHHHHHHHH-HhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
Q 005041 269 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRR-LQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQ 347 (717)
Q Consensus 269 l~~~~tg~~iGT~i~a~~~~~~~~~~v~~av~~A~~A~~~-w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~ 347 (717)
..+|++|+.++++..++ .+|+++++++|++||+. |+++|.++|.++|++++++|++|.++|++++++|+|++.
T Consensus 18 ~~~P~tg~~i~~~~~~~------~~~v~~av~~A~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~ 91 (481)
T TIGR03216 18 NINPVDGRVIARVHEAG------AAEVDAAVAAARAALKGPWGKMTVAERADLLYAVADEIERRFDDFLAAEVADTGKPR 91 (481)
T ss_pred eECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHhHhhHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcH
Confidence 35688999999998888 89999999999999997 999999999999999999999999999999988876553
Q ss_pred hhchhHHHHHHhhcChhHHHHHHHHHHHHhcccccc-cccccccc-cCCCceEEEeecceeEEEEEcCC-Cch-hHHHHH
Q 005041 348 EAGYAKSLVSRLALKPGKISSLAKSIRILADMEEPI-GQILKRTE-LADGLILEKTSCPLGVLLIVFES-RPD-ALVQIA 423 (717)
Q Consensus 348 ~~g~~~a~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~ 423 (717)
. ++. ..++..+++.+++++...+.. +...+... ...+...+++|+|+|||++|+|| ||. +.++++
T Consensus 92 ~----~~~-------~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~Pl~~~~~~~ 160 (481)
T TIGR03216 92 S----LAS-------HLDIPRGAANFRVFADVVKNAPTECFEMATPDGKGALNYAVRKPLGVVGVISPWNLPLLLMTWKV 160 (481)
T ss_pred H----HHh-------HHHHHHHHHHHHHHHHHHHHhcCccccccCCCCCCceeEEEEeccceEEEECCCCcHHHHHHHHH
Confidence 2 111 124555666666665433211 22111000 01123457889999999999998 685 567999
Q ss_pred HHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-C-ChhhhhhcCCCCccEEEeecCHHHHHHHH
Q 005041 424 SLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-R-EEIPDLLKLDDVIDLVIPRGSNKLVSQIK 500 (717)
Q Consensus 424 ~~ALaaGN~vVlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~-~-~~~~~~l~~~~~v~~v~fTGs~~~g~~i~ 500 (717)
+|||++||+||+|||+.||+|+.++++++.+ + ||+|++|+|+| + ++++++|..||+||+|+||||+++|+.|+
T Consensus 161 ~~ALaaGN~vvlKPs~~tp~t~~~l~~l~~~----aglP~g~~~~v~g~~~~~~~~~l~~~~~vd~v~fTGS~~~G~~i~ 236 (481)
T TIGR03216 161 GPALACGNTVVVKPSEETPGTATLLGEVMNA----VGVPKGVYNVVHGFGPDSAGEFLTRHPGVDAITFTGETRTGSAIM 236 (481)
T ss_pred HHHHHcCCEEEEECCccchHHHHHHHHHHHH----cCCCcCceEEEecCChhHHHHHHhcCCCCCEEEEECCHHHHHHHH
Confidence 9999999999999999999999999999986 7 99999999996 4 35789899999999999999999999999
Q ss_pred hhc---CCCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccChhhHHHHHHHHHHcCc---
Q 005041 501 EST---KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV--- 573 (717)
Q Consensus 501 ~~a---~~p~~lElGGk~p~iV~~dADl~~A~~~i~~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~--- 573 (717)
+.+ .||+++|||||||+||++|||+|.|++.+++|+|.|+| .|+|++|+|||+++| |+|+++|+++++++++
T Consensus 237 ~~aa~~~~~~~lElgG~n~~iV~~dadl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~-~~f~~~l~~~~~~~~~g~p 315 (481)
T TIGR03216 237 KAAADGVKPVSFELGGKNAAIVFADCDFDAAVAGILRSAFLNTGQVCLGTERVYVERPIF-DRFVAALKARAESLKIGVP 315 (481)
T ss_pred HHHhcCCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHH-HHHHHHHHHHHHhcCCCCC
Confidence 887 38999999999999999999999999999999999986 999999999999999 8999999999987632
Q ss_pred -------------------------------eE-ecCccc-------ccc-c-c-C-----CCCccccccccCceEEEEE
Q 005041 574 -------------------------------GL-FGGPRA-------SKL-L-Q-I-----PETRLFHHEYNSMVCTVEI 606 (717)
Q Consensus 574 -------------------------------~~-~g~~~~-------~~~-~-p-i-----~~~~~~~eE~FGPVl~v~~ 606 (717)
++ .|+... .++ + | | ++|++++||+||||++|++
T Consensus 316 ~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FgPvl~V~~ 395 (481)
T TIGR03216 316 DDPATNMGPLISAEHRDKVLSYYALAVEEGATVVTGGGVPDFGDALAGGAWVQPTIWTGLPDSARVVTEEIFGPCCHIAP 395 (481)
T ss_pred CCCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcccccccCCCCceEccEEEeCCCCCCHHHhCCCCCceEEEEE
Confidence 11 233221 233 3 5 2 3589999999999999999
Q ss_pred eCCHHHHHHHHHhcCCCceeEEEecCHHHHHHHHhcCCeeeEEEcCCCCCCCCCccCCccccccccCcccccccchhhcc
Q 005041 607 VDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGL 686 (717)
Q Consensus 607 ~~~~deAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~f 686 (717)
|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+.....+..||||.|.||+| +++|.+|+++|
T Consensus 396 ~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G----~~~g~~~l~~f 471 (481)
T TIGR03216 396 FDSEEEVIALANDTPYGLAASVWTEDLSRAHRVARQMEVGIVWVNSWFLRDLRTPFGGSKLSGIG----REGGVHSLEFY 471 (481)
T ss_pred eCCHHHHHHHHhCCCccceEEEECCCHHHHHHHHHhcCccEEEECCCCCCCCCCCcCCcccCcCC----cCchHHHHHHh
Confidence 99999999999999999999999999999999999999999999987766667899999999986 35699999999
Q ss_pred cEEEEEEec
Q 005041 687 LTTRWILRG 695 (717)
Q Consensus 687 t~~k~v~~~ 695 (717)
|+.|+++++
T Consensus 472 ~~~k~v~~~ 480 (481)
T TIGR03216 472 TELTNVCIK 480 (481)
T ss_pred hceEEEEEe
Confidence 999999763
No 26
>PRK13252 betaine aldehyde dehydrogenase; Provisional
Probab=100.00 E-value=3.6e-74 Score=650.21 Aligned_cols=399 Identities=16% Similarity=0.179 Sum_probs=340.8
Q ss_pred HHHHhcCCcceEEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHh
Q 005041 269 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 348 (717)
Q Consensus 269 l~~~~tg~~iGT~i~a~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~ 348 (717)
..+|.+|+.++++..++ .+|+++++++|++||+.|+++|.++|.++|++++++|++|+++|++++++|++++..
T Consensus 26 ~~nP~tg~~i~~~~~~~------~~dv~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ 99 (488)
T PRK13252 26 VINPATGEVLATVQAAT------PADVEAAVASAKQGQKIWAAMTAMERSRILRRAVDILRERNDELAALETLDTGKPIQ 99 (488)
T ss_pred eECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHH
Confidence 35688999999998888 899999999999999999999999999999999999999999999999887765421
Q ss_pred hchhHHHHHHhhcChhHHHHHHHHHHHHhccccc-ccccccccccCCCceEEEeecceeEEEEEcCC-Cch-hHHHHHHH
Q 005041 349 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 425 (717)
Q Consensus 349 ~g~~~a~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ 425 (717)
++. ..++...++.++++++..+. .+...+. ..+...+++|+|+|||++|+|| ||. +.+++++|
T Consensus 100 ----~a~-------~~ev~~~~~~l~~~~~~~~~~~g~~~~~---~~~~~~~~~~~PlGVv~~I~p~N~P~~~~~~~~~~ 165 (488)
T PRK13252 100 ----ETS-------VVDIVTGADVLEYYAGLAPALEGEQIPL---RGGSFVYTRREPLGVCAGIGAWNYPIQIACWKSAP 165 (488)
T ss_pred ----HHH-------HHHHHHHHHHHHHHHHHHHHhcCceecc---CCCceEEEEEeeeeEEEEECCCchHHHHHHHHHHH
Confidence 221 12555666667766654432 2322211 1234567889999999999998 685 56799999
Q ss_pred HHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecCCChhhhhhcCCCCccEEEeecCHHHHHHHHhhc-
Q 005041 426 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST- 503 (717)
Q Consensus 426 ALaaGN~vVlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a- 503 (717)
||++||+||+|||+.+|+|+..+++++++ + +|+|+||+|++...+++.|..||+||+|+||||+++|+.|++++
T Consensus 166 ALaaGN~Vv~Kps~~~p~t~~~l~~~~~~----aglP~g~v~~v~g~~~~~~~L~~~~~vd~V~fTGS~~~g~~i~~~aa 241 (488)
T PRK13252 166 ALAAGNAMIFKPSEVTPLTALKLAEIYTE----AGLPDGVFNVVQGDGRVGAWLTEHPDIAKVSFTGGVPTGKKVMAAAA 241 (488)
T ss_pred HHhcCCeEEEeCCccCcHHHHHHHHHHHH----cCcCcccEEEEecCcHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHh
Confidence 99999999999999999999999999987 7 99999999996444888888999999999999999999998877
Q ss_pred --CCCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccChhhHHHHHHHHHHcCc-------
Q 005041 504 --KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------- 573 (717)
Q Consensus 504 --~~p~~lElGGk~p~iV~~dADl~~A~~~i~~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~------- 573 (717)
.+|+++|||||||+||++|||+|.|++.+++++|.|+| +|+|++|+|||+++| |+|+++|+++++++.+
T Consensus 242 ~~l~~~~lElgG~~p~iV~~dAdl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~g~p~~~~ 320 (488)
T PRK13252 242 ASLKEVTMELGGKSPLIVFDDADLDRAADIAMLANFYSSGQVCTNGTRVFVQKSIK-AAFEARLLERVERIRIGDPMDPA 320 (488)
T ss_pred hcCCcEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeEEEEcHHHH-HHHHHHHHHHHHhcCCCCCCCCC
Confidence 38999999999999999999999999999999999976 999999999999999 8999999999886521
Q ss_pred ---------------------------eE-ecCccc------cc-cc-c-C-----CCCccccccccCceEEEEEeCCHH
Q 005041 574 ---------------------------GL-FGGPRA------SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVR 611 (717)
Q Consensus 574 ---------------------------~~-~g~~~~------~~-~~-p-i-----~~~~~~~eE~FGPVl~v~~~~~~d 611 (717)
++ +|+.+. .+ |+ | | ++|++++||+||||++|++|+|+|
T Consensus 321 ~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~~~ 400 (488)
T PRK13252 321 TNFGPLVSFAHRDKVLGYIEKGKAEGARLLCGGERLTEGGFANGAFVAPTVFTDCTDDMTIVREEIFGPVMSVLTFDDED 400 (488)
T ss_pred CcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCeEEccEEeccCCCCChHhhCCCCCceEEEEeeCCHH
Confidence 12 233221 13 33 5 2 358999999999999999999999
Q ss_pred HHHHHHHhcCCCceeEEEecCHHHHHHHHhcCCeeeEEEcCCCCCCCCCccCCccccccccCcccccccchhhcccEEEE
Q 005041 612 AAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRW 691 (717)
Q Consensus 612 eAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~ 691 (717)
|||+++|+++|||++||||+|.+++.++++++++|+|+||+.....+..||||.+.||+| +++|.+|+++||+.|+
T Consensus 401 eai~~~n~~~~gL~a~I~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G----~~~g~~~~~~ft~~k~ 476 (488)
T PRK13252 401 EVIARANDTEYGLAAGVFTADLSRAHRVIHQLEAGICWINTWGESPAEMPVGGYKQSGIG----RENGIATLEHYTQIKS 476 (488)
T ss_pred HHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhcCccEEEECCCCCCCCCCCCCCCccCcCC----cCChHHHHHHhcceEE
Confidence 999999999999999999999999999999999999999986655567899999999986 3569999999999999
Q ss_pred EEecC
Q 005041 692 ILRGN 696 (717)
Q Consensus 692 v~~~~ 696 (717)
|++..
T Consensus 477 i~~~~ 481 (488)
T PRK13252 477 VQVEM 481 (488)
T ss_pred EEEeC
Confidence 98753
No 27
>cd07140 ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids.
Probab=100.00 E-value=3.3e-74 Score=647.54 Aligned_cols=401 Identities=15% Similarity=0.191 Sum_probs=339.4
Q ss_pred HHHHhcCCcceEEEecCCcccccHhhHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
Q 005041 269 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSR--RLQALQSQDRRKILLDVADALEANESLIKVENEADVAAA 346 (717)
Q Consensus 269 l~~~~tg~~iGT~i~a~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~ 346 (717)
..+|.+++.++++..++ .+|+++++++|++||+ .|+++|.++|.++|++++++|++|+++|++++++|.|++
T Consensus 25 ~~nP~tg~~i~~~~~~~------~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~ 98 (486)
T cd07140 25 TINPTDGSVICKVSLAT------VEDVDRAVAAAKEAFENGEWGKMNARDRGRLMYRLADLMEEHQEELATIESLDSGAV 98 (486)
T ss_pred eECCCCCCEEEEEeCCC------HHHHHHHHHHHHHhcCCCchhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCc
Confidence 35688999999999888 8999999999999998 599999999999999999999999999999988777654
Q ss_pred HhhchhHHHHHHhhcChhHHHHHHHHHHHHhccccc-ccccccccc-cCCCceEEEeecceeEEEEEcCC-Cch-hHHHH
Q 005041 347 QEAGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTE-LADGLILEKTSCPLGVLLIVFES-RPD-ALVQI 422 (717)
Q Consensus 347 ~~~g~~~a~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~ 422 (717)
.. ++. ..|+...++.+++++...+. .+...+... .+.+...+++|+|+|||++|+|| ||. +.+++
T Consensus 99 ~~----~a~-------~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~r~P~GVv~~I~PwN~P~~~~~~~ 167 (486)
T cd07140 99 YT----LAL-------KTHVGMSIQTFRYFAGWCDKIQGKTIPINQARPNRNLTLTKREPIGVCGIVIPWNYPLMMLAWK 167 (486)
T ss_pred HH----HHH-------HHHHHHHHHHHHHHHHHHHHhcCccccccccCCCCceEEEEeeccceEEEEcCCchHHHHHHHH
Confidence 21 221 12555566666666543322 122221100 01223457889999999999998 686 57899
Q ss_pred HHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHH
Q 005041 423 ASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIK 500 (717)
Q Consensus 423 ~~~ALaaGN~vVlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~ 500 (717)
++|||++||+||+|||+.||+|+..+++++.+ + +|+|++|+|+| +.++++.|..||+|++|+||||+++|+.|+
T Consensus 168 i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~----aglP~gv~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~ 243 (486)
T cd07140 168 MAACLAAGNTVVLKPAQVTPLTALKFAELTVK----AGFPKGVINILPGSGSLVGQRLSDHPDVRKLGFTGSTPIGKHIM 243 (486)
T ss_pred HHHHHHhCCEEEEECCccCcHHHHHHHHHHHH----cCcCCCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHH
Confidence 99999999999999999999999999999986 7 99999999996 567888888999999999999999999998
Q ss_pred hhcC----CCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccChhhHHHHHHHHHHcCc--
Q 005041 501 ESTK----IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV-- 573 (717)
Q Consensus 501 ~~a~----~p~~lElGGk~p~iV~~dADl~~A~~~i~~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~-- 573 (717)
+.+. ||+++|||||||+||++|||+|.|++.+++++|.|+| .|++++|+|||+++| |+|+++|+++++++.+
T Consensus 244 ~~aa~~~l~~v~lElGGk~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rl~V~~~i~-~~f~~~l~~~~~~l~~g~ 322 (486)
T cd07140 244 KSCAVSNLKKVSLELGGKSPLIIFADCDMDKAVRMGMSSVFFNKGENCIAAGRLFVEESIH-DEFVRRVVEEVKKMKIGD 322 (486)
T ss_pred HHHHhcCCCeEEEEcCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEcHHHH-HHHHHHHHHHHHhCCccC
Confidence 8763 7999999999999999999999999999999999986 999999999999999 8999999999987631
Q ss_pred --------------------------------eE-ecCccc--cc-cc-c-C-----CCCccccccccCceEEEEEeC--
Q 005041 574 --------------------------------GL-FGGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVD-- 608 (717)
Q Consensus 574 --------------------------------~~-~g~~~~--~~-~~-p-i-----~~~~~~~eE~FGPVl~v~~~~-- 608 (717)
++ +|+... .+ |+ | | ++|++++||+||||++|++|+
T Consensus 323 p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~ 402 (486)
T cd07140 323 PLDRSTDHGPQNHKAHLDKLVEYCERGVKEGATLVYGGKQVDRPGFFFEPTVFTDVEDHMFIAKEESFGPIMIISKFDDG 402 (486)
T ss_pred CCCCCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCeeECCEEEeCCCCCChhhhCCCCCCeEEEEEcCCC
Confidence 11 233221 23 33 5 3 358999999999999999998
Q ss_pred CHHHHHHHHHhcCCCceeEEEecCHHHHHHHHhcCCeeeEEEcCCCCCCCCCccCCccccccccCcccccccchhhcccE
Q 005041 609 DVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLT 688 (717)
Q Consensus 609 ~~deAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~ 688 (717)
|+||||+++|+++|||++||||+|.++++++++++++|.||||+.....+.+||||.+.||+| +++|.+|+++||+
T Consensus 403 ~~~eai~~aN~~~~gL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G----~~~G~~~l~~ft~ 478 (486)
T cd07140 403 DVDGVLQRANDTEYGLASGVFTKDINKALYVSDKLEAGTVFVNTYNKTDVAAPFGGFKQSGFG----KDLGEEALNEYLK 478 (486)
T ss_pred CHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccCcCC----CcchHHHHHHhhc
Confidence 699999999999999999999999999999999999999999997766667899999999986 3569999999999
Q ss_pred EEEEEec
Q 005041 689 TRWILRG 695 (717)
Q Consensus 689 ~k~v~~~ 695 (717)
.|+|+++
T Consensus 479 ~k~v~~~ 485 (486)
T cd07140 479 TKTVTIE 485 (486)
T ss_pred EEEEEEe
Confidence 9999764
No 28
>cd07142 ALDH_F2BC Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like. Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde.
Probab=100.00 E-value=3.3e-74 Score=648.57 Aligned_cols=396 Identities=18% Similarity=0.199 Sum_probs=338.8
Q ss_pred HHHHhcCCcceEEEecCCcccccHhhHHHHHHHHHHHHHH--HhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
Q 005041 269 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRR--LQALQSQDRRKILLDVADALEANESLIKVENEADVAAA 346 (717)
Q Consensus 269 l~~~~tg~~iGT~i~a~~~~~~~~~~v~~av~~A~~A~~~--w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~ 346 (717)
..+|.+++.++++..++ .+|+++++++|++||+. |+++|.++|.++|++++++|++|.++|++++++|+|++
T Consensus 23 v~~P~t~~~i~~v~~~~------~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~ 96 (476)
T cd07142 23 TIDPRNGEVIAHVAEGD------AEDVDRAVKAARKAFDEGPWPRMTGYERSRILLRFADLLEKHADELAALETWDNGKP 96 (476)
T ss_pred eECCCCCCEEEEEcCCC------HHHHHHHHHHHHHhcCCCchhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCC
Confidence 35688999999998888 89999999999999985 99999999999999999999999999999998877655
Q ss_pred HhhchhHHHHHHhhcChhHHHHHHHHHHHHhccccc-ccccccccccCCCceEEEeecceeEEEEEcCC-Cch-hHHHHH
Q 005041 347 QEAGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIA 423 (717)
Q Consensus 347 ~~~g~~~a~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~ 423 (717)
.. ++. ..|+..+++.+++++...+. .+...+. ..+...+++|+|+|||++|+|| ||. +.++++
T Consensus 97 ~~----~a~-------~~ev~~~~~~l~~~a~~~~~~~g~~~~~---~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~i 162 (476)
T cd07142 97 YE----QAR-------YAEVPLAARLFRYYAGWADKIHGMTLPA---DGPHHVYTLHEPIGVVGQIIPWNFPLLMFAWKV 162 (476)
T ss_pred HH----HHH-------HHHHHHHHHHHHHHHHHHHHhcCccccc---CCCceEEEEEeceeeEEEECCCccHHHHHHHHH
Confidence 32 211 12566677777776654332 2322221 1223457889999999999998 796 467999
Q ss_pred HHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHh
Q 005041 424 SLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKE 501 (717)
Q Consensus 424 ~~ALaaGN~vVlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~ 501 (717)
+|||++||+||+|||+.||+|+..+++++.+ + ||+|++|+|+| ++++++.|..||+||+|+||||+++|+.|++
T Consensus 163 ~~ALaaGN~VV~KPs~~tp~~~~~l~~~~~~----aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~v~fTGs~~~G~~v~~ 238 (476)
T cd07142 163 GPALACGNTIVLKPAEQTPLSALLAAKLAAE----AGLPDGVLNIVTGFGPTAGAAIASHMDVDKVAFTGSTEVGKIIMQ 238 (476)
T ss_pred HHHHHcCCEEEEECCCcccHHHHHHHHHHHH----cCcCcccEEEEeCCchhHHHHHhcCCCCCEEEEECcHHHHHHHHH
Confidence 9999999999999999999999999999987 7 99999999996 5668888999999999999999999999998
Q ss_pred hcC----CCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccChhhHHHHHHHHHHcCc---
Q 005041 502 STK----IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV--- 573 (717)
Q Consensus 502 ~a~----~p~~lElGGk~p~iV~~dADl~~A~~~i~~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~--- 573 (717)
.+. +|+++|||||||+||++|||+|.|++.+++|+|.|+| .|+|++|||||+++| |+|+++|+++++++.+
T Consensus 239 ~aa~~~~~~v~lElgGk~p~iV~~dADl~~Aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~G~p 317 (476)
T cd07142 239 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHESIY-DEFVEKAKARALKRVVGDP 317 (476)
T ss_pred HHHHcCCCeEEEECCCCCeeEECCCCCHHHHHHHHHHHHhcCCCCCCCCCeeEEEeHHHH-HHHHHHHHHHHHhcCCCCC
Confidence 763 7999999999999999999999999999999999976 999999999999999 8999999998876421
Q ss_pred -------------------------------eE-ecCccc--cc-cc-c-C-----CCCccccccccCceEEEEEeCCHH
Q 005041 574 -------------------------------GL-FGGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVR 611 (717)
Q Consensus 574 -------------------------------~~-~g~~~~--~~-~~-p-i-----~~~~~~~eE~FGPVl~v~~~~~~d 611 (717)
++ +|+... .+ ++ | | ++|++++||+||||++|++|+|+|
T Consensus 318 ~~~~~~~Gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~ 397 (476)
T cd07142 318 FRKGVEQGPQVDKEQFEKILSYIEHGKEEGATLITGGDRIGSKGYYIQPTIFSDVKDDMKIARDEIFGPVQSILKFKTVD 397 (476)
T ss_pred CCCCCcCCcCcCHHHHHHHHHHHHHHHhCCCEEEecCCcCCCCCeeEccEEeecCCCCChhhhCCccCceEEEEeeCCHH
Confidence 12 233221 23 33 5 2 358899999999999999999999
Q ss_pred HHHHHHHhcCCCceeEEEecCHHHHHHHHhcCCeeeEEEcCCCCCCCCCccCCccccccccCcccccccchhhcccEEEE
Q 005041 612 AAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRW 691 (717)
Q Consensus 612 eAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~ 691 (717)
|||+++|+++|||++||||+|.+++.++++++++|+|+||+.....+..||||.+.||+| +++|.+|+++||+.|+
T Consensus 398 eai~~~n~~~~gL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G----~~~g~~~~~~ft~~k~ 473 (476)
T cd07142 398 EVIKRANNSKYGLAAGVFSKNIDTANTLSRALKAGTVWVNCYDVFDASIPFGGYKMSGIG----REKGIYALNNYLQVKA 473 (476)
T ss_pred HHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccCcCC----ccchHHHHHHhhheeE
Confidence 999999999999999999999999999999999999999987766778899999999986 3569999999999999
Q ss_pred EE
Q 005041 692 IL 693 (717)
Q Consensus 692 v~ 693 (717)
++
T Consensus 474 v~ 475 (476)
T cd07142 474 VV 475 (476)
T ss_pred Ee
Confidence 85
No 29
>cd07107 ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like. Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD.
Probab=100.00 E-value=7.4e-74 Score=643.24 Aligned_cols=396 Identities=17% Similarity=0.174 Sum_probs=337.4
Q ss_pred HHHhcCCcceEEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhh
Q 005041 270 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 349 (717)
Q Consensus 270 ~~~~tg~~iGT~i~a~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~ 349 (717)
.+|.+|+.++++..++ .+|+++++++|++||+.|+++|.++|.++|++++++|++|.++|++++.+|++++..
T Consensus 2 ~~p~tg~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~- 74 (456)
T cd07107 2 INPATGQVLARVPAAS------AADVDRAVAAARAAFPEWRATTPLERARMLRELATRLREHAEELALIDALDCGNPVS- 74 (456)
T ss_pred cCCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHH-
Confidence 3578899999998888 899999999999999999999999999999999999999999999998877755421
Q ss_pred chhHHHHHHhhcChhHHHHHHHHHHHHhccccc-ccccccccccCCCceEEEeecceeEEEEEcCC-Cch-hHHHHHHHH
Q 005041 350 GYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 426 (717)
Q Consensus 350 g~~~a~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~A 426 (717)
++ ..|+...++.+++++...+. .+...+. ..+...+++|+|+|||++|+|| ||. +.+++++||
T Consensus 75 ---~a--------~~ev~~~~~~l~~~a~~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~A 140 (456)
T cd07107 75 ---AM--------LGDVMVAAALLDYFAGLVTELKGETIPV---GGRNLHYTLREPYGVVARIVAFNHPLMFAAAKIAAP 140 (456)
T ss_pred ---HH--------HHHHHHHHHHHHHHHHHHHHhCCccccC---CCCceEEEEEecceEEEEECCcccHHHHHHHHHhHH
Confidence 21 23555566666665543321 2222221 1233567889999999999998 796 567999999
Q ss_pred HHhCCEEEEeCCcchHHHHHHHHHHHHHhcccccCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHhhc--
Q 005041 427 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDTVGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST-- 503 (717)
Q Consensus 427 LaaGN~vVlKps~~tp~t~~~l~~~~~~al~~alP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a-- 503 (717)
|++||+||+|||+.||+|+..+++++.+ +||+|+||+|++ ++++++.|..||++++|+||||+++|+.|++.+
T Consensus 141 LaaGN~VV~Kps~~~p~~~~~l~~~~~~----~lP~gvv~~v~g~~~~~~~~l~~~~~i~~v~fTGs~~~g~~i~~~aa~ 216 (456)
T cd07107 141 LAAGNTVVVKPPEQAPLSALRLAELARE----VLPPGVFNILPGDGATAGAALVRHPDVKRIALIGSVPTGRAIMRAAAE 216 (456)
T ss_pred HHcCCEEEEeCCCCChHHHHHHHHHHHH----hCCcCcEEEEeCCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhc
Confidence 9999999999999999999999999986 499999999996 555778888899999999999999999999887
Q ss_pred -CCCEEEecCCcceEEEcCCCCHHHHHHHHHhhc-cCCCc-cccccceEEEcCcccChhhHHHHHHHHHHcCc-------
Q 005041 504 -KIPVLGHADGICHVYVDKSANLDVAKNIVIDAK-IDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------- 573 (717)
Q Consensus 504 -~~p~~lElGGk~p~iV~~dADl~~A~~~i~~~~-~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~------- 573 (717)
.+|+++|||||||+||++|||+|.|++.+++|+ |.|+| +|+|++|||||+++| |+|+++|+++++++..
T Consensus 217 ~~~~~~lElgG~~p~iV~~dadl~~Aa~~i~~~~~f~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~l~~g~p~~~~ 295 (456)
T cd07107 217 GIKHVTLELGGKNALIVFPDADPEAAADAAVAGMNFTWCGQSCGSTSRLFVHESIY-DEVLARVVERVAAIKVGDPTDPA 295 (456)
T ss_pred CCCeEEEECCCCCeEEECCCCCHHHHHHHHHHhchhhcCCCCCcCCcEEEEcHHHH-HHHHHHHHHHHHhCCCCCCCCCC
Confidence 489999999999999999999999999999995 88776 999999999999999 8999999999886521
Q ss_pred ---------------------------eE-ecCccc------ccc-c-c-C-----CCCccccccccCceEEEEEeCCHH
Q 005041 574 ---------------------------GL-FGGPRA------SKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVDDVR 611 (717)
Q Consensus 574 ---------------------------~~-~g~~~~------~~~-~-p-i-----~~~~~~~eE~FGPVl~v~~~~~~d 611 (717)
++ +|+... .++ + | | ++|++++||+||||++|++|+|+|
T Consensus 296 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPvl~i~~~~~~~ 375 (456)
T cd07107 296 TTMGPLVSRQQYDRVMHYIDSAKREGARLVTGGGRPEGPALEGGFYVEPTVFADVTPGMRIAREEIFGPVLSVLRWRDEA 375 (456)
T ss_pred CCcCcccCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCceECCEEEECCCCCChhhhCCCCCceEEEEeeCCHH
Confidence 11 233221 133 3 5 2 368999999999999999999999
Q ss_pred HHHHHHHhcCCCceeEEEecCHHHHHHHHhcCCeeeEEEcCCCCCCCCCccCCccccccccCcccccccchhhcccEEEE
Q 005041 612 AAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRW 691 (717)
Q Consensus 612 eAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~ 691 (717)
|||+++|+++|||++||||+|.++++++++++++|.|+||+++...+.+||||.+.||+| +++|++|+++||+.|+
T Consensus 376 eai~~~n~~~~gL~a~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfgG~k~SG~G----~~~g~~~~~~~~~~k~ 451 (456)
T cd07107 376 EMVAQANGVEYGLTAAIWTNDISQAHRTARRVEAGYVWINGSSRHFLGAPFGGVKNSGIG----REECLEELLSYTQEKN 451 (456)
T ss_pred HHHHHHhCCCCcceEEEECCCHHHHHHHHHhcCcCEEEECCCCCCCCCCCcCCcccccCC----cCchHHHHHHhhceEE
Confidence 999999999999999999999999999999999999999998877778999999999986 2468999999999999
Q ss_pred EEec
Q 005041 692 ILRG 695 (717)
Q Consensus 692 v~~~ 695 (717)
|+++
T Consensus 452 v~~~ 455 (456)
T cd07107 452 VNVR 455 (456)
T ss_pred EEEe
Confidence 9863
No 30
>cd07148 ALDH_RL0313 Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1. Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD.
Probab=100.00 E-value=1.2e-73 Score=640.58 Aligned_cols=401 Identities=19% Similarity=0.205 Sum_probs=332.4
Q ss_pred HHHhcCCcceEEEecCCcccccHhhHHHHHHHHHHHHHH-HhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHh
Q 005041 270 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRR-LQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 348 (717)
Q Consensus 270 ~~~~tg~~iGT~i~a~~~~~~~~~~v~~av~~A~~A~~~-w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~ 348 (717)
.+|++++.++++..++ .+|+++++++|++||+. |+.+|.++|.++|++++++|+++.++|++++.+|+|++..
T Consensus 4 ~~P~t~~~i~~~~~~~------~~~v~~av~~A~~a~~~~~~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ 77 (455)
T cd07148 4 VNPFDLKPIGEVPTVD------WAAIDKALDTAHALFLDRNNWLPAHERIAILERLADLMEERADELALLIAREGGKPLV 77 (455)
T ss_pred cCCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHH
Confidence 4688999999998888 89999999999999998 4679999999999999999999999999998877765432
Q ss_pred hchhHHHHHHhhcChhHHHHHHHHHHHHhcccccccccccccccCCCceEEEeecceeEEEEEcCC-Cch-hHHHHHHHH
Q 005041 349 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 426 (717)
Q Consensus 349 ~g~~~a~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~A 426 (717)
++.. ++....+.+.++++.++.+.+...+.+.. ....+...+++|+|+|||++|+|| ||. +.++++++|
T Consensus 78 ----~a~~-ev~~~i~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~A 148 (455)
T cd07148 78 ----DAKV-EVTRAIDGVELAADELGQLGGREIPMGLT----PASAGRIAFTTREPIGVVVAISAFNHPLNLIVHQVAPA 148 (455)
T ss_pred ----HHHH-HHHHHHHHHHHHHHHHHHhcCcccccccc----cCCCCceEEEEEecceEEEEECCCCcHHHHHHHHHHHH
Confidence 2211 12222233444444444332211010000 001234567889999999999998 685 667999999
Q ss_pred HHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecCCChhhhhhcCCCCccEEEeecCHHHHHHHHhhc--
Q 005041 427 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST-- 503 (717)
Q Consensus 427 LaaGN~vVlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a-- 503 (717)
|++||+||+|||+.||+++.++++++++ + ||+|++|+|+++.+.++.|..||+||+|+||||+++|+.|++.+
T Consensus 149 LaaGN~VvlKps~~~p~~~~~l~~~~~~----aGlP~gvv~~v~g~~~~~~~L~~~~~v~~v~fTGs~~~G~~i~~~aa~ 224 (455)
T cd07148 149 IAAGCPVIVKPALATPLSCLAFVDLLHE----AGLPEGWCQAVPCENAVAEKLVTDPRVAFFSFIGSARVGWMLRSKLAP 224 (455)
T ss_pred HHcCCEEEeeCCCcccHHHHHHHHHHHH----cCCCcCcEEEEeCChHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhhc
Confidence 9999999999999999999999999987 7 99999999996555788888999999999999999999998876
Q ss_pred CCCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccChhhHHHHHHHHHHcCc---------
Q 005041 504 KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV--------- 573 (717)
Q Consensus 504 ~~p~~lElGGk~p~iV~~dADl~~A~~~i~~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~--------- 573 (717)
.+|+++|||||||+||++|||+|.|++.+++|+|.|+| .|+|++|||||+++| |+|+++|+++++++.+
T Consensus 225 ~~~~~lElGG~~p~iV~~dADl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~g~p~~~~~~ 303 (455)
T cd07148 225 GTRCALEHGGAAPVIVDRSADLDAMIPPLVKGGFYHAGQVCVSVQRVFVPAEIA-DDFAQRLAAAAEKLVVGDPTDPDTE 303 (455)
T ss_pred CCcEEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCccCCeEEEEcHhHH-HHHHHHHHHHHhcCCCCCCCCCCCc
Confidence 38999999999999999999999999999999999976 999999999999999 8999999999887632
Q ss_pred -------------------------eE-ecCccccc-cc-c-C-----CCCccccccccCceEEEEEeCCHHHHHHHHHh
Q 005041 574 -------------------------GL-FGGPRASK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQ 619 (717)
Q Consensus 574 -------------------------~~-~g~~~~~~-~~-p-i-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~ 619 (717)
++ .|+.+..+ ++ | | ++|++++||+||||++|++|+|+||||+++|+
T Consensus 304 ~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~n~ 383 (455)
T cd07148 304 VGPLIRPREVDRVEEWVNEAVAAGARLLCGGKRLSDTTYAPTVLLDPPRDAKVSTQEIFGPVVCVYSYDDLDEAIAQANS 383 (455)
T ss_pred CCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCeEcCEEEeCCCCCCHHHhCCCcCCeEEEEecCCHHHHHHHHhC
Confidence 11 13332222 23 5 3 35889999999999999999999999999999
Q ss_pred cCCCceeEEEecCHHHHHHHHhcCCeeeEEEcCCCCCC-CCCccCCccccccccCcccccccchhhcccEEEEEEe
Q 005041 620 HGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFC-DGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILR 694 (717)
Q Consensus 620 ~~~GL~a~I~t~d~~~a~~~~~~l~~G~v~iN~~~~~~-~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v~~ 694 (717)
++|||++||||+|.+++.+|++++++|+|+||+++... +..||||.+.||+| +++|.+|+++||+.|++.+
T Consensus 384 ~~~gL~a~i~t~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~PfgG~k~SG~G----~~~g~~~~~~~~~~k~~~~ 455 (455)
T cd07148 384 LPVAFQAAVFTKDLDVALKAVRRLDATAVMVNDHTAFRVDWMPFAGRRQSGYG----TGGIPYTMHDMTQEKMAVI 455 (455)
T ss_pred CCCCceEEEEcCCHHHHHHHHHHcCcCeEEECCCCCCCCCCCCCCcchhcccC----CCchHHHHHHhhceeEEeC
Confidence 99999999999999999999999999999999876443 45799999999986 3568999999999999853
No 31
>cd07085 ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2. Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD.
Probab=100.00 E-value=1.3e-73 Score=644.43 Aligned_cols=400 Identities=18% Similarity=0.186 Sum_probs=339.8
Q ss_pred HHHHhcCCcceEEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHh
Q 005041 269 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 348 (717)
Q Consensus 269 l~~~~tg~~iGT~i~a~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~ 348 (717)
..+|++++.++++..++ .+|+++++++|++||+.|+++|.++|.++|++++++|++|+++|++++++|.+++..
T Consensus 20 ~~~P~t~~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~ 93 (478)
T cd07085 20 VYNPATGEVIARVPLAT------AEEVDAAVAAAKAAFPAWSATPVLKRQQVMFKFRQLLEENLDELARLITLEHGKTLA 93 (478)
T ss_pred eeCCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHH
Confidence 35688999999998888 899999999999999999999999999999999999999999999998877765432
Q ss_pred hchhHHHHHHhhcChhHHHHHHHHHHHHhcccc-cccccccccccCCCceEEEeecceeEEEEEcCC-Cch-hHHHHHHH
Q 005041 349 AGYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 425 (717)
Q Consensus 349 ~g~~~a~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ 425 (717)
++ ..|+...++.+++++...+ ..++..+.. ..+...+.+++|+|||++|+|| ||. +.+++++|
T Consensus 94 ----~a--------~~ev~~~~~~~~~~~~~~~~~~g~~~~~~--~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ 159 (478)
T cd07085 94 ----DA--------RGDVLRGLEVVEFACSIPHLLKGEYLENV--ARGIDTYSYRQPLGVVAGITPFNFPAMIPLWMFPM 159 (478)
T ss_pred ----HH--------HHHHHHHHHHHHHHHHHHHHhCCeecccC--CCCceeEEEEecceEEEEECCCChHHHHHHHHHHH
Confidence 22 2356666666666654332 123222110 1234567899999999999998 685 56799999
Q ss_pred HHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecCCChhhhhhcCCCCccEEEeecCHHHHHHHHhhcC
Q 005041 426 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK 504 (717)
Q Consensus 426 ALaaGN~vVlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a~ 504 (717)
||++||+||+|||+.||+|+..+++++.+ + +|+|++|+|++..+.++.|..||+||+|+||||+++|+.|++.+.
T Consensus 160 ALaaGN~VvlKps~~tp~~~~~l~~~l~~----aGlP~gvv~~v~g~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~aa 235 (478)
T cd07085 160 AIACGNTFVLKPSERVPGAAMRLAELLQE----AGLPDGVLNVVHGGKEAVNALLDHPDIKAVSFVGSTPVGEYIYERAA 235 (478)
T ss_pred HHhcCCEEEEECCCcCcHHHHHHHHHHHH----hCCCCCcEEEEecCHHHHHHHhcCCCcCEEEEECCHHHHHHHHHHHh
Confidence 99999999999999999999999999987 7 999999999965556777888999999999999999999988773
Q ss_pred ---CCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccChhhHHHHHHHHHHcCc-------
Q 005041 505 ---IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------- 573 (717)
Q Consensus 505 ---~p~~lElGGk~p~iV~~dADl~~A~~~i~~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~------- 573 (717)
+|+++|||||||+||++|||+|.|++.+++++|.|+| .|++++|||||+++| |+|+++|+++++++++
T Consensus 236 ~~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-~~f~~~L~~~~~~l~~G~p~~~~ 314 (478)
T cd07085 236 ANGKRVQALGGAKNHAVVMPDADLEQTANALVGAAFGAAGQRCMALSVAVAVGDEA-DEWIPKLVERAKKLKVGAGDDPG 314 (478)
T ss_pred hcCCcEEecCCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEeHHHH-HHHHHHHHHHHHhCCCCCCCCCC
Confidence 8999999999999999999999999999999999987 999999999999999 8999999999887532
Q ss_pred ---------------------------eE-ecCcc------cccc-c-c-C-----CCCccccccccCceEEEEEeCCHH
Q 005041 574 ---------------------------GL-FGGPR------ASKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVDDVR 611 (717)
Q Consensus 574 ---------------------------~~-~g~~~------~~~~-~-p-i-----~~~~~~~eE~FGPVl~v~~~~~~d 611 (717)
++ .|+.. ..++ + | | ++|++++||+||||++|++|+|+|
T Consensus 315 ~~~gpli~~~~~~~v~~~i~~a~~~Ga~~l~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~d 394 (478)
T cd07085 315 ADMGPVISPAAKERIEGLIESGVEEGAKLVLDGRGVKVPGYENGNFVGPTILDNVTPDMKIYKEEIFGPVLSIVRVDTLD 394 (478)
T ss_pred CCcCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCcCCCCeEEcCEEEecCCCCChhhhCcCcCCeEEEEEeCCHH
Confidence 22 23321 1233 3 6 3 358999999999999999999999
Q ss_pred HHHHHHHhcCCCceeEEEecCHHHHHHHHhcCCeeeEEEcCCCCCC-CCCccCCccccccccCcccccccchhhcccEEE
Q 005041 612 AAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFC-DGARFGLGAEVGISTSRIHARGPVGVEGLLTTR 690 (717)
Q Consensus 612 eAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~v~iN~~~~~~-~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k 690 (717)
|||+++|+++|||++||||+|.++++++++++++|+|+||+++... +.+||||.+.||+| +++++|.+|+++||+.|
T Consensus 395 eai~~~N~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfgG~k~SG~G--~~~~~g~~~~~~~~~~k 472 (478)
T cd07085 395 EAIAIINANPYGNGAAIFTRSGAAARKFQREVDAGMVGINVPIPVPLAFFSFGGWKGSFFG--DLHFYGKDGVRFYTQTK 472 (478)
T ss_pred HHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCCCCcccccCC--CCcCChHHHHHHhcceE
Confidence 9999999999999999999999999999999999999999875443 56899999999986 33356899999999999
Q ss_pred EEEec
Q 005041 691 WILRG 695 (717)
Q Consensus 691 ~v~~~ 695 (717)
+|.++
T Consensus 473 ~v~~~ 477 (478)
T cd07085 473 TVTSR 477 (478)
T ss_pred EEEEe
Confidence 99764
No 32
>TIGR01780 SSADH succinate-semialdehyde dehydrogenase. SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070).
Probab=100.00 E-value=9.8e-74 Score=640.46 Aligned_cols=392 Identities=16% Similarity=0.172 Sum_probs=336.0
Q ss_pred HHHhcCCcceEEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhh
Q 005041 270 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 349 (717)
Q Consensus 270 ~~~~tg~~iGT~i~a~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~ 349 (717)
.+|.+++.++++..++ .+|+++++++|++||+.|+++|.++|.++|++++++|+++.++|++++.+|.+++..
T Consensus 2 ~~P~tg~~i~~~~~~~------~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~- 74 (448)
T TIGR01780 2 YNPATGEIIGTVPDQG------VEEAEAAIRAAYEAFKTWKNTTAKERSSLLRKWYNLMMENKDDLARLITLENGKPLK- 74 (448)
T ss_pred cCCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH-
Confidence 3578999999998888 899999999999999999999999999999999999999999999998877655432
Q ss_pred chhHHHHHHhhcChhHHHHHHHHHHHHhcccc-cccccccccccCCCceEEEeecceeEEEEEcCC-Cch-hHHHHHHHH
Q 005041 350 GYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 426 (717)
Q Consensus 350 g~~~a~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~A 426 (717)
++ ..|+...++.+++++...+ ..+...+. ...+...+.+++|+|||++|+|| ||. +.+++++||
T Consensus 75 ---~a--------~~ev~~~~~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~A 141 (448)
T TIGR01780 75 ---EA--------KGEILYAASFLEWFAEEAKRVYGDTIPS--PQSDKRLLVIKQPVGVCAAITPWNFPAAMITRKAGAA 141 (448)
T ss_pred ---HH--------HHHHHHHHHHHHHHHHHHHHhcCccccC--CCCCceeEEEEeeeeEEEEEcCCChHHHHHHHHHHHH
Confidence 21 2366777777777664332 22322221 11234556789999999999998 796 456899999
Q ss_pred HHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC--CChhhhhhcCCCCccEEEeecCHHHHHHHHhhc
Q 005041 427 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS--REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST 503 (717)
Q Consensus 427 LaaGN~vVlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~--~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a 503 (717)
|++||+||+|||+.+|+|+..+++++.+ + +|+|++|+|++ +.++++.|..||+||+|+||||+++|++|++.+
T Consensus 142 LaaGN~VvlKps~~~p~~~~~l~~~~~~----aGlP~gvv~~v~g~~~~~~~~~l~~~~~i~~v~ftGs~~~g~~v~~~a 217 (448)
T TIGR01780 142 LAAGCTVVVKPAEQTPLSALALARLAEQ----AGIPKGVLNVITGSRAKEVGKVLCTSPLVRKISFTGSTNVGKILMKQS 217 (448)
T ss_pred HHcCCeEeeECCccchHHHHHHHHHHHH----cCCCccceEEEeCCCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHH
Confidence 9999999999999999999999999986 7 99999999995 466788888999999999999999999999877
Q ss_pred ---CCCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccChhhHHHHHHHHHHcCc------
Q 005041 504 ---KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------ 573 (717)
Q Consensus 504 ---~~p~~lElGGk~p~iV~~dADl~~A~~~i~~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~------ 573 (717)
.+|+++|||||||+||++|||+|.|++.+++|+|.|+| .|+|++|+|||+++| |+|+++|+++++++.+
T Consensus 218 a~~~~~~~lElGGk~~~iV~~dadl~~aa~~iv~~~f~~sGQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~l~~G~p~~~ 296 (448)
T TIGR01780 218 ASTVKKVSMELGGNAPFIVFDDADIDQAVEGAMASKFRNAGQTCVCANRLYVHDGIY-DEFAKKLAEAVKKLKVGNGLDE 296 (448)
T ss_pred hhcCCceEeecCCCCeeEECCCCCHHHHHHHHHHHHHHhcCCcccCCceeechHHHH-HHHHHHHHHHHHhcCCCCCCCC
Confidence 38999999999999999999999999999999999986 999999999999999 8999999999987632
Q ss_pred ----------------------------eE-ecCccc--cc-cc-c-C-----CCCccccccccCceEEEEEeCCHHHHH
Q 005041 574 ----------------------------GL-FGGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAI 614 (717)
Q Consensus 574 ----------------------------~~-~g~~~~--~~-~~-p-i-----~~~~~~~eE~FGPVl~v~~~~~~deAi 614 (717)
++ +|+... .+ |+ | | ++|++++||+||||++|++|+|+||||
T Consensus 297 ~~~~gpli~~~~~~~v~~~i~~a~~~Ga~il~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~~eai 376 (448)
T TIGR01780 297 GVTQGPLINEKAVEKVEKHIADAVEKGAKVVTGGKRHELGGNFFEPTVLSNVTQDMLVAKEETFGPLAPVFKFDDEEEVI 376 (448)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeeEcCEEEecCCCCChHhhCCCCCceEEEEEECCHHHHH
Confidence 11 233221 23 33 5 2 368999999999999999999999999
Q ss_pred HHHHhcCCCceeEEEecCHHHHHHHHhcCCeeeEEEcCCCCCCCCCccCCccccccccCcccccccchhhcccEEE
Q 005041 615 DHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTR 690 (717)
Q Consensus 615 ~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k 690 (717)
+++|+++|||++||||+|.++++++++++++|.||||++....+..||||.+.||+| +++|.+|+++||+.|
T Consensus 377 ~~an~~~~gL~~~vfs~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G----~~~g~~~~~~~~~~k 448 (448)
T TIGR01780 377 AIANDTEVGLAAYFFSRDLATIWRVAEALEYGMVGINTGLISNVVAPFGGVKQSGLG----REGSKYGIEEYLETK 448 (448)
T ss_pred HHHhCCCcCceEEEECCCHHHHHHHHHhCCccEEEECCCCCCCCCCCCCCcccccCC----ccchHHHHHHHhccC
Confidence 999999999999999999999999999999999999998766667899999999986 346899999999875
No 33
>cd07106 ALDH_AldA-AAD23400 Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like. Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD.
Probab=100.00 E-value=2.3e-73 Score=637.89 Aligned_cols=393 Identities=19% Similarity=0.185 Sum_probs=339.9
Q ss_pred HHHhcCCcceEEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhh
Q 005041 270 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 349 (717)
Q Consensus 270 ~~~~tg~~iGT~i~a~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~ 349 (717)
.+|++|+.++++..++ .+|+++++++|++||+.|+++|.++|.++|++++++|++|+++|++++.+|++++..
T Consensus 2 ~~P~tg~~~~~~~~~~------~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~- 74 (446)
T cd07106 2 INPATGEVFASAPVAS------EAQLDQAVAAAKAAFPGWSATPLEERRAALLAIADAIEANAEELARLLTLEQGKPLA- 74 (446)
T ss_pred cCCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH-
Confidence 3578999999998888 899999999999999999999999999999999999999999999998777654421
Q ss_pred chhHHHHHHhhcChhHHHHHHHHHHHHhcccccccccccccccCCCceEEEeecceeEEEEEcCC-Cch-hHHHHHHHHH
Q 005041 350 GYAKSLVSRLALKPGKISSLAKSIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAI 427 (717)
Q Consensus 350 g~~~a~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~AL 427 (717)
++ ..|+..+++.+++++....+ +...+. ..+...+.+++|+|||++|+|| ||. +.++++++||
T Consensus 75 ---~a--------~~ev~~~~~~l~~~~~~~~~-~~~~~~---~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~AL 139 (446)
T cd07106 75 ---EA--------QFEVGGAVAWLRYTASLDLP-DEVIED---DDTRRVELRRKPLGVVAAIVPWNFPLLLAAWKIAPAL 139 (446)
T ss_pred ---HH--------HHHHHHHHHHHHHHHhhhhc-CccccC---CCCceEEEEEEcceEEEEEcCCChHHHHHHHHHHHHH
Confidence 11 23677788888887754422 111111 1234567889999999999998 685 5679999999
Q ss_pred HhCCEEEEeCCcchHHHHHHHHHHHHHhcccccCcCceEEecCCChhhhhhcCCCCccEEEeecCHHHHHHHHhhc---C
Q 005041 428 RSGNGLLLKGGKEAMRSNAILHKVITSAIPDTVGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST---K 504 (717)
Q Consensus 428 aaGN~vVlKps~~tp~t~~~l~~~~~~al~~alP~gvv~vv~~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a---~ 504 (717)
++||+||+|||+++|+|+.++++++++ ++|+|++|+|++..++++.|..||++|+|+||||+++|+.|++++ .
T Consensus 140 aaGN~VilKps~~~p~~~~~l~~~~~~----~lP~g~~~~v~g~~~~~~~l~~~~~vd~V~fTGs~~~g~~v~~~aa~~~ 215 (446)
T cd07106 140 LAGNTVVLKPSPFTPLCTLKLGELAQE----VLPPGVLNVVSGGDELGPALTSHPDIRKISFTGSTATGKKVMASAAKTL 215 (446)
T ss_pred HcCCEEEEECCccchHHHHHHHHHHHH----hCCcCeEEEeeCChhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcC
Confidence 999999999999999999999999986 599999999997556788888999999999999999999999877 3
Q ss_pred CCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccChhhHHHHHHHHHHcCc----------
Q 005041 505 IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV---------- 573 (717)
Q Consensus 505 ~p~~lElGGk~p~iV~~dADl~~A~~~i~~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~---------- 573 (717)
+|++||||||||+||++|||+|.|++.+++|+|.|+| .|+|++|||||+++| |+|+++|+++++++.+
T Consensus 216 ~~~~lElGG~~p~iV~~dADl~~aa~~iv~~~~~~~GQ~C~a~~rv~V~~~v~-d~f~~~l~~~~~~~~~G~p~~~~~~~ 294 (446)
T cd07106 216 KRVTLELGGNDAAIVLPDVDIDAVAPKLFWGAFINSGQVCAAIKRLYVHESIY-DEFCEALVALAKAAVVGDGLDPGTTL 294 (446)
T ss_pred CeeEEecCCCCeeEECCCCCHHHHHHHHHHHHHHhcCCCCCCCcEEEEccccH-HHHHHHHHHHHHhcCCCCCCCCCCCC
Confidence 8999999999999999999999999999999999986 999999999999999 8999999999887632
Q ss_pred ------------------------eE-ecCccc--ccc-c-c-C-----CCCccccccccCceEEEEEeCCHHHHHHHHH
Q 005041 574 ------------------------GL-FGGPRA--SKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIH 618 (717)
Q Consensus 574 ------------------------~~-~g~~~~--~~~-~-p-i-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN 618 (717)
++ +|+... .++ + | | ++|++++||+||||++|++|+|+||||+++|
T Consensus 295 gpli~~~~~~~i~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~FgPvl~v~~~~~~~eai~~~n 374 (446)
T cd07106 295 GPVQNKMQYDKVKELVEDAKAKGAKVLAGGEPLDGPGYFIPPTIVDDPPEGSRIVDEEQFGPVLPVLKYSDEDEVIARAN 374 (446)
T ss_pred CCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeeEcCEEEeCCCCCCHHHhcCccCCeEEEEeeCCHHHHHHHHh
Confidence 11 233221 133 3 6 2 3588999999999999999999999999999
Q ss_pred hcCCCceeEEEecCHHHHHHHHhcCCeeeEEEcCCCCCCCCCccCCccccccccCcccccccchhhcccEEEEEE
Q 005041 619 QHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 693 (717)
Q Consensus 619 ~~~~GL~a~I~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v~ 693 (717)
+++|||++||||+|.+++.++++++++|+|+||++....+.+||||.+.||+| +++|++|+++||+.|+|.
T Consensus 375 ~~~~gL~~~i~t~d~~~~~~~~~~~~~G~v~iN~~~~~~~~~pfGG~~~SG~G----~~~g~~~~~~~t~~k~v~ 445 (446)
T cd07106 375 DSEYGLGASVWSSDLERAEAVARRLEAGTVWINTHGALDPDAPFGGHKQSGIG----VEFGIEGLKEYTQTQVIN 445 (446)
T ss_pred CCCCCceEEEECCCHHHHHHHHHhCCccEEEECCCCCCCCCCCCCCccccccC----ccchHHHHHHhhceeEEe
Confidence 99999999999999999999999999999999998877788999999999986 356999999999999985
No 34
>TIGR02299 HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase. This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring.
Probab=100.00 E-value=1.7e-73 Score=645.12 Aligned_cols=397 Identities=20% Similarity=0.208 Sum_probs=339.5
Q ss_pred HHHHhcCCcceEEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHh
Q 005041 269 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 348 (717)
Q Consensus 269 l~~~~tg~~iGT~i~a~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~ 348 (717)
..+|.+|+.++++..++ .+|+++++++|++||+.|+++|.++|.++|++++++|++|+++|++++++|++++..
T Consensus 20 ~~nP~tg~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~Gk~~~ 93 (488)
T TIGR02299 20 TLSPATNEVLGSVARGG------AADVDRAAKAAKEAFKRWAELKAAERKRYLHKIADLIEQHADEIAVLECLDCGQPLR 93 (488)
T ss_pred eECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHH
Confidence 35688999999988888 899999999999999999999999999999999999999999999998887765432
Q ss_pred hchhHHHHHHhhcChhHHHHHHHHHHHHhcccc--cccccccccccCCCceEEEeecceeEEEEEcCC-Cch-hHHHHHH
Q 005041 349 AGYAKSLVSRLALKPGKISSLAKSIRILADMEE--PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIAS 424 (717)
Q Consensus 349 ~g~~~a~~~~~~~~~~~i~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~ 424 (717)
++ ..++..+++.+++++...+ ..+...+. .....+++++|+|||++|+|| ||. +.+++++
T Consensus 94 ----~a--------~~ev~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~ 157 (488)
T TIGR02299 94 ----QT--------RQQVIRAAENFRFFADKCEEAMDGRTYPV----DTHLNYTVRVPVGPVGLITPWNAPFMLSTWKIA 157 (488)
T ss_pred ----HH--------HHHHHHHHHHHHHHHHhHHHhcCCccccC----CCceEEEEEEecceEEEECCCccHHHHHHHHHH
Confidence 21 1355566666666654332 11222221 123457889999999999998 685 5679999
Q ss_pred HHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHhh
Q 005041 425 LAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKES 502 (717)
Q Consensus 425 ~ALaaGN~vVlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~ 502 (717)
|||++||+||+|||+.||+|+.++++++.+ + +|+|++|+|++ +.++++.|..||+||+|+||||+++|+.|++.
T Consensus 158 ~ALaaGN~VIlKps~~~p~~~~~l~~~~~~----aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~ 233 (488)
T TIGR02299 158 PALAFGNTVVLKPAEWSPLTAARLAEIAKE----AGLPDGVFNLVHGFGEEAGKALVAHPDVKAVSFTGETATGSIIMRN 233 (488)
T ss_pred HHHHcCCEEEEECchhchHHHHHHHHHHHH----cCcChhheeEEeCCchHHHHHHhcCCCcCEEEEECcHHHHHHHHHH
Confidence 999999999999999999999999999987 7 99999999996 55677788889999999999999999999987
Q ss_pred c---CCCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccChhhHHHHHHHHHHcCc-----
Q 005041 503 T---KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV----- 573 (717)
Q Consensus 503 a---~~p~~lElGGk~p~iV~~dADl~~A~~~i~~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~----- 573 (717)
+ .+|+++|||||||+||++|||+|.|++.+++++|.|+| +|+|++|||||+++| |+|+++|+++++++.+
T Consensus 234 aa~~l~~~~lElGGknp~iV~~dAdl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~-d~f~~~l~~~~~~l~~g~p~~ 312 (488)
T TIGR02299 234 GADTLKRFSMELGGKSPVIVFDDADLERALDAVVFMIFSFNGERCTASSRLLVQESIA-EDFVEKLVERVRAIRVGHPLD 312 (488)
T ss_pred HHhcCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEcHHHH-HHHHHHHHHHHhhCCcCCCCC
Confidence 6 49999999999999999999999999999999999987 999999999999999 8999999999887631
Q ss_pred -----------------------------eE-ecCccc---------cc-cc-c-C-----CCCccccccccCceEEEEE
Q 005041 574 -----------------------------GL-FGGPRA---------SK-LL-Q-I-----PETRLFHHEYNSMVCTVEI 606 (717)
Q Consensus 574 -----------------------------~~-~g~~~~---------~~-~~-p-i-----~~~~~~~eE~FGPVl~v~~ 606 (717)
++ +|+... .+ |+ | | ++|++++||+||||++|++
T Consensus 313 ~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~ 392 (488)
T TIGR02299 313 PETEVGPLIHPEHLAKVLGYVEAAEKEGATILVGGERAPTFRGEDLGRGNYVLPTVFTGADNHMRIAQEEIFGPVLTVIP 392 (488)
T ss_pred CCCCCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccCcccccccCCCCeEEccEEEecCCCCCchhhCCCcCCeEEEEe
Confidence 12 233221 13 33 5 2 3588999999999999999
Q ss_pred eCCHHHHHHHHHhcCCCceeEEEecCHHHHHHHHhcCCeeeEEEcCCCCCCCCCccCCccccccccCcccccccchhhcc
Q 005041 607 VDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGL 686 (717)
Q Consensus 607 ~~~~deAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~f 686 (717)
|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+.....+..||||.+.||+| +++|.+|+++|
T Consensus 393 ~~~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G----~~~g~~~~~~~ 468 (488)
T TIGR02299 393 FKDEEEAIEKANDTRYGLAGYVWTNDVGRAHRVALALEAGMIWVNSQNVRHLPTPFGGVKASGIG----REGGTYSFDFY 468 (488)
T ss_pred eCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCccCcCC----ccchHHHHHHH
Confidence 99999999999999999999999999999999999999999999987766667899999999986 34699999999
Q ss_pred cEEEEEEecC
Q 005041 687 LTTRWILRGN 696 (717)
Q Consensus 687 t~~k~v~~~~ 696 (717)
|+.|+++++.
T Consensus 469 ~~~k~i~~~~ 478 (488)
T TIGR02299 469 TETKNVALAL 478 (488)
T ss_pred hceEEEEEec
Confidence 9999998864
No 35
>PRK13473 gamma-aminobutyraldehyde dehydrogenase; Provisional
Probab=100.00 E-value=1.6e-73 Score=643.70 Aligned_cols=401 Identities=15% Similarity=0.170 Sum_probs=342.3
Q ss_pred hHHHHhcCCcceEEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
Q 005041 268 SIIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQ 347 (717)
Q Consensus 268 ~l~~~~tg~~iGT~i~a~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~ 347 (717)
.+.+|.+++.++++..++ .+|+++++++|++||+.|+++|.++|.++|++++++|++|+++|++++.+|++++.
T Consensus 20 ~~~~P~t~~~i~~~~~~~------~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~ 93 (475)
T PRK13473 20 PVYNPATGEVLAEIAEAS------AAQVDAAVAAADAAFPEWSQTTPKERAEALLKLADAIEENADEFARLESLNCGKPL 93 (475)
T ss_pred eeECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 346788999999999888 89999999999999999999999999999999999999999999998887765542
Q ss_pred hhchhHHHHHHhhcChhHHHHHHHHHHHHhcccccc-cccccccccCCCceEEEeecceeEEEEEcCC-Cch-hHHHHHH
Q 005041 348 EAGYAKSLVSRLALKPGKISSLAKSIRILADMEEPI-GQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIAS 424 (717)
Q Consensus 348 ~~g~~~a~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~ 424 (717)
. ++. ..|+..+++.+++++...+.. +...+.. ..+...+++|+|+|||++|+|| ||. +.+++++
T Consensus 94 ~----~a~-------~~ev~~~~~~~~~~a~~~~~~~g~~~~~~--~~~~~~~~~r~P~GVv~~I~p~N~P~~~~~~~i~ 160 (475)
T PRK13473 94 H----LAL-------NDEIPAIVDVFRFFAGAARCLEGKAAGEY--LEGHTSMIRRDPVGVVASIAPWNYPLMMAAWKLA 160 (475)
T ss_pred H----HHH-------HHHHHHHHHHHHHHHHHHHHhcCcccccC--CCCceeEEEEecceeEEEEccCChHHHHHHHHHH
Confidence 1 111 125667777777776543322 2211110 1233457889999999999998 685 5679999
Q ss_pred HHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccccCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHhhc
Q 005041 425 LAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDTVGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST 503 (717)
Q Consensus 425 ~ALaaGN~vVlKps~~tp~t~~~l~~~~~~al~~alP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a 503 (717)
|||++||+||+|||+.+|+|+..+++++.+ +||+|++|+|++ +.+++..|..||+||+|+||||+++|+.|++.+
T Consensus 161 ~ALaaGN~VIlKps~~~p~~~~~l~~~~~~----alP~gv~~~v~g~~~~~~~~l~~~~~vd~V~fTGs~~~g~~i~~~a 236 (475)
T PRK13473 161 PALAAGNTVVLKPSEITPLTALKLAELAAD----ILPPGVLNVVTGRGATVGDALVGHPKVRMVSLTGSIATGKHVLSAA 236 (475)
T ss_pred HHHhcCCEEEEECCCCChHHHHHHHHHHHH----hCCcCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHH
Confidence 999999999999999999999999999986 499999999996 667888888899999999999999999998877
Q ss_pred ---CCCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccChhhHHHHHHHHHHcCc------
Q 005041 504 ---KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------ 573 (717)
Q Consensus 504 ---~~p~~lElGGk~p~iV~~dADl~~A~~~i~~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~------ 573 (717)
.+|+++|||||||+||++|||+|.|++.+++++|.|+| .|+|++|||||+++| |+|+++|+++++++.+
T Consensus 237 a~~~~~~~lElgG~~p~iV~~dADld~Aa~~i~~~~f~n~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~l~~G~p~~~ 315 (475)
T PRK13473 237 ADSVKRTHLELGGKAPVIVFDDADLDAVVEGIRTFGYYNAGQDCTAACRIYAQRGIY-DDLVAKLAAAVATLKVGDPDDE 315 (475)
T ss_pred hhcCCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHH-HHHHHHHHHHHHhCCCCCCCCC
Confidence 38999999999999999999999999999999999987 999999999999999 8999999999887531
Q ss_pred -----------------------------eE-ecCccc--cc-cc-c-C-----CCCccccccccCceEEEEEeCCHHHH
Q 005041 574 -----------------------------GL-FGGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAA 613 (717)
Q Consensus 574 -----------------------------~~-~g~~~~--~~-~~-p-i-----~~~~~~~eE~FGPVl~v~~~~~~deA 613 (717)
++ +|+... .+ |+ | | +++++++||+||||++|++|+|+|||
T Consensus 316 ~~~~gpli~~~~~~~v~~~i~~a~~~G~a~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~dea 395 (475)
T PRK13473 316 DTELGPLISAAHRDRVAGFVERAKALGHIRVVTGGEAPDGKGYYYEPTLLAGARQDDEIVQREVFGPVVSVTPFDDEDQA 395 (475)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHcCCeEEEECCCcCCCCceeEcCEEEecCCCCChhhhCCccCCeEEEeccCCHHHH
Confidence 11 233322 23 33 5 2 36899999999999999999999999
Q ss_pred HHHHHhcCCCceeEEEecCHHHHHHHHhcCCeeeEEEcCCCCCCCCCccCCccccccccCcccccccchhhcccEEEEEE
Q 005041 614 IDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 693 (717)
Q Consensus 614 i~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v~ 693 (717)
|+++|+++|||++||||+|.+++.++++++++|+|+||++....+.+||||.+.||+| +++|.+|+++||+.|+++
T Consensus 396 i~~~N~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G----~~~g~~~~~~~t~~k~i~ 471 (475)
T PRK13473 396 VRWANDSDYGLASSVWTRDVGRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKQSGYG----KDMSLYGLEDYTVVRHVM 471 (475)
T ss_pred HHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCccccccC----ccchHHHHHHHhceEEEE
Confidence 9999999999999999999999999999999999999998766677899999999986 356899999999999998
Q ss_pred ecC
Q 005041 694 RGN 696 (717)
Q Consensus 694 ~~~ 696 (717)
+++
T Consensus 472 ~~~ 474 (475)
T PRK13473 472 VKH 474 (475)
T ss_pred Eec
Confidence 754
No 36
>PTZ00381 aldehyde dehydrogenase family protein; Provisional
Probab=100.00 E-value=2.1e-73 Score=640.21 Aligned_cols=386 Identities=18% Similarity=0.196 Sum_probs=330.5
Q ss_pred HhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhhchhHHHHHHhhcChhHHHHHHH
Q 005041 292 QVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAK 371 (717)
Q Consensus 292 ~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~g~~~a~~~~~~~~~~~i~~~~~ 371 (717)
.+|+++++++|++||++|++++.++|.++|++++++|++|+++|++++++|++++.. ++...++..+..+++++++
T Consensus 6 ~~~i~~av~~a~~a~~~~~~~~~~~R~~~L~~l~~~l~~~~~~i~~a~~~d~Gk~~~----ea~~~Ev~~~~~~i~~~~~ 81 (493)
T PTZ00381 6 PEIIPPIVKKLKESFLTGKTRPLEFRKQQLRNLLRMLEENKQEFSEAVHKDLGRHPF----ETKMTEVLLTVAEIEHLLK 81 (493)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH----HHHHHHHHHHHHHHHHHHH
Confidence 789999999999999999999999999999999999999999999999999977642 3433455566778999999
Q ss_pred HHHHHhcccccccccccccccCCCceEEEeecceeEEEEEcCC-Cch-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHH
Q 005041 372 SIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILH 449 (717)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~ 449 (717)
++++|++.... .. +... .....+++|+|+|||++|+|| ||. ++++++++||+|||+||+||||.||.|+.+++
T Consensus 82 ~~~~~~~~~~~-~~--~~~~--~~~~~~v~~~PlGVV~iI~PwN~Pl~l~~~~l~~ALaaGN~VIlKPse~tp~t~~~l~ 156 (493)
T PTZ00381 82 HLDEYLKPEKV-DT--VGVF--GPGKSYIIPEPLGVVLVIGAWNYPLNLTLIPLAGAIAAGNTVVLKPSELSPHTSKLMA 156 (493)
T ss_pred HHHHHhCCccc-CC--cccc--CCCceEEEEecCcEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHH
Confidence 99988753211 10 1001 112457899999999999998 785 67899999999999999999999999999999
Q ss_pred HHHHHhcccccCcCceEEecCCChhhhhhcCCCCccEEEeecCHHHHHHHHhhc---CCCEEEecCCcceEEEcCCCCHH
Q 005041 450 KVITSAIPDTVGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST---KIPVLGHADGICHVYVDKSANLD 526 (717)
Q Consensus 450 ~~~~~al~~alP~gvv~vv~~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a---~~p~~lElGGk~p~iV~~dADl~ 526 (717)
+++++ +||+|++++|+|+.+.++.|..|| +|+|+||||+++|+.|++++ .+|+++|||||||+||++|||++
T Consensus 157 ~ll~~----~lp~~~v~vv~g~~~~~~~l~~~~-~d~i~FTGS~~vG~~V~~~aa~~l~pv~lElGGk~p~iV~~dAdl~ 231 (493)
T PTZ00381 157 KLLTK----YLDPSYVRVIEGGVEVTTELLKEP-FDHIFFTGSPRVGKLVMQAAAENLTPCTLELGGKSPVIVDKSCNLK 231 (493)
T ss_pred HHHHH----hCCcCEEEEecCCHHHHHHHHhCC-CCEEEEECCHHHHHHHHHHHHhcCCcEEEEcCCCCceEEcCCCCHH
Confidence 99986 599999999997555565566676 99999999999999999877 39999999999999999999999
Q ss_pred HHHHHHHhhccCCCc-cccccceEEEcCcccChhhHHHHHHHHHHcCc------------------------------e-
Q 005041 527 VAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------------------------------G- 574 (717)
Q Consensus 527 ~A~~~i~~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~------------------------------~- 574 (717)
.|++.+++|+|.|+| +|+|++|+|||++++ |+|+++|+++++++.. +
T Consensus 232 ~Aa~~i~~g~~~naGQ~C~A~~~vlV~~~i~-d~f~~~l~~~~~~~~g~~~~~~~~~gpli~~~~~~ri~~~i~~~ga~~ 310 (493)
T PTZ00381 232 VAARRIAWGKFLNAGQTCVAPDYVLVHRSIK-DKFIEALKEAIKEFFGEDPKKSEDYSRIVNEFHTKRLAELIKDHGGKV 310 (493)
T ss_pred HHHHHHHHHHHhhcCCcCCCCCEEEEeHHHH-HHHHHHHHHHHHHHhCCCCccCCCcCCCCCHHHHHHHHHHHHhCCCcE
Confidence 999999999999987 999999999999999 8999999998886510 0
Q ss_pred EecCccc-cc-cc-c-C-----CCCccccccccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEecCHHHHHHHHhcCCe
Q 005041 575 LFGGPRA-SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDS 645 (717)
Q Consensus 575 ~~g~~~~-~~-~~-p-i-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~ 645 (717)
+.|+... .+ ++ | | ++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.++++++++
T Consensus 311 ~~gG~~~~~~~~i~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~~n~~~~gLa~~vft~d~~~~~~~~~~~~s 390 (493)
T PTZ00381 311 VYGGEVDIENKYVAPTIIVNPDLDSPLMQEEIFGPILPILTYENIDEVLEFINSRPKPLALYYFGEDKRHKELVLENTSS 390 (493)
T ss_pred EECCCcCCCCCeEeeEEEecCCCCChHHhccccCCeEEEEeeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCc
Confidence 1233221 12 33 5 2 3589999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEEcCCCCC--CCCCccCCccccccccCcccccccchhhcccEEEEEEecC
Q 005041 646 AAVFHNASTRF--CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGN 696 (717)
Q Consensus 646 G~v~iN~~~~~--~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v~~~~ 696 (717)
|.|+||++... .+.+||||.+.||+| +++|.+|+++||+.|+|..+.
T Consensus 391 G~v~IN~~~~~~~~~~~PFGG~g~SG~G----~~~G~~g~~~fs~~k~v~~~~ 439 (493)
T PTZ00381 391 GAVVINDCVFHLLNPNLPFGGVGNSGMG----AYHGKYGFDTFSHPKPVLNKS 439 (493)
T ss_pred ceEEECCccccccCCCCCCCCcCccccc----ccchHHHHHhccceeEEEEcc
Confidence 99999987543 467899999999986 356999999999999998874
No 37
>PLN02467 betaine aldehyde dehydrogenase
Probab=100.00 E-value=2.2e-73 Score=642.83 Aligned_cols=400 Identities=18% Similarity=0.187 Sum_probs=339.8
Q ss_pred HHHhcCCcceEEEecCCcccccHhhHHHHHHHHHHHH-----HHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
Q 005041 270 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESS-----RRLQALQSQDRRKILLDVADALEANESLIKVENEADVA 344 (717)
Q Consensus 270 ~~~~tg~~iGT~i~a~~~~~~~~~~v~~av~~A~~A~-----~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~ 344 (717)
.+|.+++.++++..++ .+|+++|+++|++|| +.|+++|..+|.++|++++++|++|+++|++++++|.|
T Consensus 28 ~~P~t~~~i~~~~~~~------~~dv~~av~~A~~a~~~~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~G 101 (503)
T PLN02467 28 VNPATEETIGDIPAAT------AEDVDAAVEAARKAFKRNKGKDWARTTGAVRAKYLRAIAAKITERKSELAKLETLDCG 101 (503)
T ss_pred ECCCCCCEEEEEcCCC------HHHHHHHHHHHHHHhhhcccchhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcC
Confidence 5678999999998888 899999999999999 89999999999999999999999999999999888776
Q ss_pred HHHhhchhHHHHHHhhcChhHHHHHHHHHHHHhcccccc-cccccccccC-CCceEEEeecceeEEEEEcCC-Cch-hHH
Q 005041 345 AAQEAGYAKSLVSRLALKPGKISSLAKSIRILADMEEPI-GQILKRTELA-DGLILEKTSCPLGVLLIVFES-RPD-ALV 420 (717)
Q Consensus 345 ~~~~~g~~~a~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~PlGVV~~I~p~-~P~-~~~ 420 (717)
|+.. ++ ..|+..+++.+++++...+.. +........+ .+...+++|+|+|||++|+|| ||. +.+
T Consensus 102 k~~~----~a--------~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~ 169 (503)
T PLN02467 102 KPLD----EA--------AWDMDDVAGCFEYYADLAEALDAKQKAPVSLPMETFKGYVLKEPLGVVGLITPWNYPLLMAT 169 (503)
T ss_pred CCHH----HH--------HHHHHHHHHHHHHHHHHHHHhcCccccccCCCCCCceeEEEEecCceEEEECCCChHHHHHH
Confidence 5532 22 125666666666665433221 2211000001 133467899999999999998 685 567
Q ss_pred HHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHH
Q 005041 421 QIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQ 498 (717)
Q Consensus 421 ~~~~~ALaaGN~vVlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~ 498 (717)
++++|||++||+||+|||+.||+|+..+++++++ + +|+|++|+|+| +.++++.|..||+||+|+||||+.+|+.
T Consensus 170 ~~i~~ALaaGN~Vv~Kps~~tp~~~~~l~~~~~e----ag~P~gvv~~v~g~~~~~~~~L~~~~~v~~v~fTGs~~~g~~ 245 (503)
T PLN02467 170 WKVAPALAAGCTAVLKPSELASVTCLELADICRE----VGLPPGVLNVVTGLGTEAGAPLASHPGVDKIAFTGSTATGRK 245 (503)
T ss_pred HHHHHHHHcCCEEEEECCCcCcHHHHHHHHHHHH----cCcCcCeEEEEeCCchhHHHHHhcCCCCCEEEEECCHHHHHH
Confidence 9999999999999999999999999999999987 7 99999999996 5667888889999999999999999999
Q ss_pred HHhhc---CCCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccChhhHHHHHHHHHHcCc-
Q 005041 499 IKEST---KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV- 573 (717)
Q Consensus 499 i~~~a---~~p~~lElGGk~p~iV~~dADl~~A~~~i~~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~- 573 (717)
|++.+ .||+++|||||||+||++|||++.|++.+++|+|.|+| .|+|++|||||+++| |+|+++|+++++++.+
T Consensus 246 v~~~aa~~~~~~~lElGG~~~~iV~~dADl~~A~~~i~~~~f~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~l~~g 324 (503)
T PLN02467 246 IMTAAAQMVKPVSLELGGKSPIIVFDDVDLDKAVEWAMFGCFWTNGQICSATSRLLVHERIA-SEFLEKLVKWAKNIKIS 324 (503)
T ss_pred HHHHHhccCCcEEEECCCCCceEECCCCCHHHHHHHHHHHHHhhcCCCCCCCcEEEEcHHHH-HHHHHHHHHHHHhcCCC
Confidence 99877 38999999999999999999999999999999999987 999999999999999 8999999999887521
Q ss_pred ---------------------------------eE-ecCccc----ccc-c-c-C-----CCCccccccccCceEEEEEe
Q 005041 574 ---------------------------------GL-FGGPRA----SKL-L-Q-I-----PETRLFHHEYNSMVCTVEIV 607 (717)
Q Consensus 574 ---------------------------------~~-~g~~~~----~~~-~-p-i-----~~~~~~~eE~FGPVl~v~~~ 607 (717)
++ .|+... .++ + | | ++|++++||+||||++|++|
T Consensus 325 ~p~~~~~~~Gpli~~~~~~~v~~~v~~a~~~Ga~vl~gG~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~ 404 (503)
T PLN02467 325 DPLEEGCRLGPVVSEGQYEKVLKFISTAKSEGATILCGGKRPEHLKKGFFIEPTIITDVTTSMQIWREEVFGPVLCVKTF 404 (503)
T ss_pred CCCCCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCeEEeeEEEeCCCCCChHhhCCCCCceEEEEee
Confidence 11 233221 133 3 5 2 35889999999999999999
Q ss_pred CCHHHHHHHHHhcCCCceeEEEecCHHHHHHHHhcCCeeeEEEcCCCCCCCCCccCCccccccccCcccccccchhhccc
Q 005041 608 DDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLL 687 (717)
Q Consensus 608 ~~~deAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft 687 (717)
+|+||||+++|+++|||++||||+|.+++.++++++++|.|+||++.......||||.+.||+| +++|.+|+++||
T Consensus 405 ~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G----~~~G~~~l~~ft 480 (503)
T PLN02467 405 STEDEAIELANDSHYGLAGAVISNDLERCERVSEAFQAGIVWINCSQPCFCQAPWGGIKRSGFG----RELGEWGLENYL 480 (503)
T ss_pred CCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccCcCC----CcchHHHHHHhh
Confidence 9999999999999999999999999999999999999999999987665667899999999986 356899999999
Q ss_pred EEEEEEecC
Q 005041 688 TTRWILRGN 696 (717)
Q Consensus 688 ~~k~v~~~~ 696 (717)
+.|++.+..
T Consensus 481 ~~k~i~~~~ 489 (503)
T PLN02467 481 SVKQVTKYI 489 (503)
T ss_pred CeEEEEEec
Confidence 999998854
No 38
>cd07090 ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1. NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis.
Probab=100.00 E-value=2.6e-73 Score=639.36 Aligned_cols=397 Identities=16% Similarity=0.172 Sum_probs=342.0
Q ss_pred HHHhcCCcceEEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhh
Q 005041 270 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 349 (717)
Q Consensus 270 ~~~~tg~~iGT~i~a~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~ 349 (717)
.+|.+++.++++..++ .+|+++++++|++||+.|+++|.++|.++|++++++|++|.++|++++++|++++..
T Consensus 2 ~~P~t~~~i~~~~~~~------~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~- 74 (457)
T cd07090 2 IEPATGEVLATVHCAG------AEDVDLAVKSAKAAQKEWSATSGMERGRILRKAADLLRERNDEIARLETIDNGKPIE- 74 (457)
T ss_pred cCCCCCCEEEEEcCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH-
Confidence 3578899999988888 899999999999999999999999999999999999999999999999888765431
Q ss_pred chhHHHHHHhhcChhHHHHHHHHHHHHhccccc-ccccccccccCCCceEEEeecceeEEEEEcCC-Cch-hHHHHHHHH
Q 005041 350 GYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 426 (717)
Q Consensus 350 g~~~a~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~A 426 (717)
++ ..|+..+++.+++++...+. .+...+. +.+...+++++|+|||++|+|| ||. +.++++++|
T Consensus 75 ---~a--------~~ev~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~A 140 (457)
T cd07090 75 ---EA--------RVDIDSSADCLEYYAGLAPTLSGEHVPL---PGGSFAYTRREPLGVCAGIGAWNYPIQIASWKSAPA 140 (457)
T ss_pred ---HH--------HHHHHHHHHHHHHHHHHHHHhCCeeecc---CCCceEEEEEeecceEEEECCCccHHHHHHHHHHHH
Confidence 22 23566777777777654432 2322211 1244567899999999999998 785 567999999
Q ss_pred HHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecCCChhhhhhcCCCCccEEEeecCHHHHHHHHhhcC-
Q 005041 427 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK- 504 (717)
Q Consensus 427 LaaGN~vVlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a~- 504 (717)
|++||+||+|||+.+|+|+..+++++.+ + ||+|++|+|++..++++.|..||+||+|+||||+++|+.|++.+.
T Consensus 141 LaaGN~Vv~Kps~~~~~~~~~l~~~~~~----aGlP~g~~~~v~g~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~ 216 (457)
T cd07090 141 LACGNAMVYKPSPFTPLTALLLAEILTE----AGLPDGVFNVVQGGGETGQLLCEHPDVAKVSFTGSVPTGKKVMSAAAK 216 (457)
T ss_pred HhcCCeeeecCCCcCcHHHHHHHHHHHH----cCCCcccEEEEeCChhhHHHHhcCCCCCEEEEECcHHHHHHHHHHHhc
Confidence 9999999999999999999999999987 7 999999999965457788889999999999999999999998873
Q ss_pred --CCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccChhhHHHHHHHHHHcCc--------
Q 005041 505 --IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV-------- 573 (717)
Q Consensus 505 --~p~~lElGGk~p~iV~~dADl~~A~~~i~~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~-------- 573 (717)
+|+++|||||||+||++|||+|.|++.+++++|.|+| +|++++|||||+++| |+|+++|+++++++..
T Consensus 217 ~~~~~~lelgG~~p~iV~~dAdl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~g~p~~~~~ 295 (457)
T cd07090 217 GIKHVTLELGGKSPLIIFDDADLENAVNGAMMANFLSQGQVCSNGTRVFVQRSIK-DEFTERLVERTKKIRIGDPLDEDT 295 (457)
T ss_pred cCCceEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHH-HHHHHHHHHHHHhcCCCCCCCCCC
Confidence 8999999999999999999999999999999999987 999999999999999 8999999999987531
Q ss_pred --------------------------eE-ecCccc-------cc-cc-c-C-----CCCccccccccCceEEEEEeCCHH
Q 005041 574 --------------------------GL-FGGPRA-------SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVR 611 (717)
Q Consensus 574 --------------------------~~-~g~~~~-------~~-~~-p-i-----~~~~~~~eE~FGPVl~v~~~~~~d 611 (717)
++ .|+... .+ |+ | | ++|++++||+||||++|++|+|+|
T Consensus 296 ~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~d 375 (457)
T cd07090 296 QMGALISEEHLEKVLGYIESAKQEGAKVLCGGERVVPEDGLENGFYVSPCVLTDCTDDMTIVREEIFGPVMSILPFDTEE 375 (457)
T ss_pred CcccccCHHHHHHHHHHHHHHHHCCCEEEECCCcCcccccCCCCeeECCEEEecCCCCChHHhCCCCCCeEEEEEECCHH
Confidence 11 233221 12 33 5 3 358999999999999999999999
Q ss_pred HHHHHHHhcCCCceeEEEecCHHHHHHHHhcCCeeeEEEcCCCCCCCCCccCCccccccccCcccccccchhhcccEEEE
Q 005041 612 AAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRW 691 (717)
Q Consensus 612 eAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~ 691 (717)
|||+++|+++|||++||||+|.++++++++++++|+|+||+........||||.+.||+| +++|++|+++||+.|+
T Consensus 376 eai~~~n~~~~gLsa~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G----~~~g~~~~~~f~~~k~ 451 (457)
T cd07090 376 EVIRRANDTTYGLAAGVFTRDLQRAHRVIAQLQAGTCWINTYNISPVEVPFGGYKQSGFG----RENGTAALEHYTQLKT 451 (457)
T ss_pred HHHHHHhCCCcCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCcCCCccCcCC----ccchHHHHHHHhCeEE
Confidence 999999999999999999999999999999999999999997666677899999999986 3569999999999999
Q ss_pred EEecC
Q 005041 692 ILRGN 696 (717)
Q Consensus 692 v~~~~ 696 (717)
+.+++
T Consensus 452 ~~~~~ 456 (457)
T cd07090 452 VYVEM 456 (457)
T ss_pred EEEeC
Confidence 98754
No 39
>cd07151 ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like. NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD.
Probab=100.00 E-value=3.9e-73 Score=638.47 Aligned_cols=397 Identities=19% Similarity=0.222 Sum_probs=337.8
Q ss_pred HHHhcCCcceEEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhh
Q 005041 270 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 349 (717)
Q Consensus 270 ~~~~tg~~iGT~i~a~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~ 349 (717)
.+|++++.++++...+ .+|+++++++|++||+.|+++|..+|.++|++++++|++|+++|++++++|+|++..
T Consensus 15 ~~P~t~~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~- 87 (465)
T cd07151 15 LNPYTGETLAEIPAAS------KEDVDEAYRAAAAAQKEWAATLPQERAEILEKAAQILEERRDEIVEWLIRESGSTRI- 87 (465)
T ss_pred ECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH-
Confidence 5678999999988888 899999999999999999999999999999999999999999999998887765431
Q ss_pred chhHHHHHHhhcChhHHHHHHHHHHHHhcccccc-cccccccccCCCceEEEeecceeEEEEEcCC-Cch-hHHHHHHHH
Q 005041 350 GYAKSLVSRLALKPGKISSLAKSIRILADMEEPI-GQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 426 (717)
Q Consensus 350 g~~~a~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~A 426 (717)
++ ..|+..+++.+++++...+.. +...+.. ..+...+++|+|+|||++|+|| ||. +.+++++||
T Consensus 88 ---~a--------~~Ev~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~A 154 (465)
T cd07151 88 ---KA--------NIEWGAAMAITREAATFPLRMEGRILPSD--VPGKENRVYREPLGVVGVISPWNFPLHLSMRSVAPA 154 (465)
T ss_pred ---HH--------HHHHHHHHHHHHHHHHhHHHhcCccccCC--CCCceeEEEEecceEEEEECCCChHHHHHHHHHHHH
Confidence 21 235667777777776544322 2222211 1234467889999999999998 685 567999999
Q ss_pred HHhCCEEEEeCCcchHHHH-HHHHHHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHhhc
Q 005041 427 IRSGNGLLLKGGKEAMRSN-AILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST 503 (717)
Q Consensus 427 LaaGN~vVlKps~~tp~t~-~~l~~~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a 503 (717)
|++||+||+|||+.||+++ .++++++.+ + +|+|++|+|+| +.++++.|..||.+|+|+||||+++|+.|++.+
T Consensus 155 LaaGN~Vi~Kps~~~p~~~~~~l~~~l~~----aG~P~gvv~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a 230 (465)
T cd07151 155 LALGNAVVLKPASDTPITGGLLLAKIFEE----AGLPKGVLNVVVGAGSEIGDAFVEHPVPRLISFTGSTPVGRHIGELA 230 (465)
T ss_pred HHcCCEEEEECCCCCcHhHHHHHHHHHHH----cCcCccceEEEecCchhhHHHHhcCCCCCEEEEECCHHHHHHHHHHH
Confidence 9999999999999999996 688888886 7 99999999996 566788888999999999999999999998876
Q ss_pred ---CCCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccChhhHHHHHHHHHHcCc------
Q 005041 504 ---KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------ 573 (717)
Q Consensus 504 ---~~p~~lElGGk~p~iV~~dADl~~A~~~i~~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~------ 573 (717)
.+|+++|||||||+||++|||+|.|++.+++++|.|+| .|++++|||||+++| |+|+++|+++++++.+
T Consensus 231 a~~~~~~~lElGGk~p~iV~~daDl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~-~~f~~~l~~~~~~~~~g~p~~~ 309 (465)
T cd07151 231 GRHLKKVALELGGNNPFVVLEDADIDAAVNAAVFGKFLHQGQICMAINRIIVHEDVY-DEFVEKFVERVKALPYGDPSDP 309 (465)
T ss_pred HhcCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeHHHH-HHHHHHHHHHHHhCCCCCCCCC
Confidence 48999999999999999999999999999999999987 999999999999999 8999999999887632
Q ss_pred ----------------------------eE-ecCccccccc-c-C-----CCCccccccccCceEEEEEeCCHHHHHHHH
Q 005041 574 ----------------------------GL-FGGPRASKLL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHI 617 (717)
Q Consensus 574 ----------------------------~~-~g~~~~~~~~-p-i-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~a 617 (717)
++ .|+.....++ | | ++|++++||+||||++|++|+|+||||+++
T Consensus 310 ~~~~gpli~~~~~~~v~~~v~~a~~~ga~vl~gg~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~ 389 (465)
T cd07151 310 DTVVGPLINESQVDGLLDKIEQAVEEGATLLVGGEAEGNVLEPTVLSDVTNDMEIAREEIFGPVAPIIKADDEEEALELA 389 (465)
T ss_pred CCCcCCCcCHHHHHHHHHHHHHHHhCCCEEEecCCcCCEEEccEEEeCCCCCCchhhCcCcCCeEEEEeeCCHHHHHHHH
Confidence 11 1222111133 5 2 358999999999999999999999999999
Q ss_pred HhcCCCceeEEEecCHHHHHHHHhcCCeeeEEEcCCCCC-CCCCccCCccccccccCcccccccchhhcccEEEEEEec
Q 005041 618 HQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRF-CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRG 695 (717)
Q Consensus 618 N~~~~GL~a~I~t~d~~~a~~~~~~l~~G~v~iN~~~~~-~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v~~~ 695 (717)
|+++|||++||||+|.+++.++++++++|+|+||+.+.. .+.+||||.+.||+| +++|++|+++||+.|++++.
T Consensus 390 n~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G----~~~g~~~l~~~t~~k~~~~~ 464 (465)
T cd07151 390 NDTEYGLSGAVFTSDLERGVQFARRIDAGMTHINDQPVNDEPHVPFGGEKNSGLG----RFNGEWALEEFTTDKWISVQ 464 (465)
T ss_pred hCCCccceEEEECCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCcccccCC----cCChHHHHHHhhceEEEEec
Confidence 999999999999999999999999999999999987654 356899999999986 34699999999999998764
No 40
>cd07143 ALDH_AldA_AN0554 Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like. NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD.
Probab=100.00 E-value=6e-73 Score=637.68 Aligned_cols=397 Identities=16% Similarity=0.155 Sum_probs=340.5
Q ss_pred HHHhcCCcceEEEecCCcccccHhhHHHHHHHHHHHHH-HHh-cCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
Q 005041 270 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSR-RLQ-ALQSQDRRKILLDVADALEANESLIKVENEADVAAAQ 347 (717)
Q Consensus 270 ~~~~tg~~iGT~i~a~~~~~~~~~~v~~av~~A~~A~~-~w~-~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~ 347 (717)
.+|.+++.++++..++ .+|+++++++|++||+ .|+ ++|.++|.++|++++++|++|+++|++++++|++++.
T Consensus 27 ~~P~t~~~i~~~~~~~------~~~v~~av~~a~~a~~~~W~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~ 100 (481)
T cd07143 27 YNPSTGKLITKIAEAT------EADVDIAVEVAHAAFETDWGLKVSGSKRGRCLSKLADLMERNLDYLASIEALDNGKTF 100 (481)
T ss_pred ECCCCCCEEEEEeCCC------HHHHHHHHHHHHHhhhhhhcccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCh
Confidence 5678999999998888 8999999999999998 599 9999999999999999999999999999988876543
Q ss_pred hhchhHHHHHHhhcChhHHHHHHHHHHHHhcccccc-cccccccccCCCceEEEeecceeEEEEEcCC-Cch-hHHHHHH
Q 005041 348 EAGYAKSLVSRLALKPGKISSLAKSIRILADMEEPI-GQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIAS 424 (717)
Q Consensus 348 ~~g~~~a~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~ 424 (717)
. +. . ..|+..+++.+++++...+.. +...+. ..+...+++|+|+|||++|+|| ||. +.+++++
T Consensus 101 ~----~~--~-----~~ev~~~~~~~~~~a~~a~~~~g~~~~~---~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~ 166 (481)
T cd07143 101 G----TA--K-----RVDVQASADTFRYYGGWADKIHGQVIET---DIKKLTYTRHEPIGVCGQIIPWNFPLLMCAWKIA 166 (481)
T ss_pred H----HH--H-----HHHHHHHHHHHHHHHHHHHHhcCccccC---CCCceEEEEEecceeEEEECCCcChHHHHHHHHH
Confidence 1 11 0 125667777777776554332 332221 1234567889999999999998 796 4579999
Q ss_pred HHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHhh
Q 005041 425 LAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKES 502 (717)
Q Consensus 425 ~ALaaGN~vVlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~ 502 (717)
|||++||+||+|||+.||+++..+++++.+ + ||+|++|+|+| +.++++.|..||+||+|+||||+++|+.|++.
T Consensus 167 ~ALaaGN~VvlKps~~~p~~~~~l~~~l~~----aGlP~g~v~~v~g~~~~~~~~L~~~~~vd~V~fTGs~~~G~~i~~~ 242 (481)
T cd07143 167 PALAAGNTIVLKPSELTPLSALYMTKLIPE----AGFPPGVINVVSGYGRTCGNAISSHMDIDKVAFTGSTLVGRKVMEA 242 (481)
T ss_pred HHHHcCCEEEEeCCCCCcHHHHHHHHHHHh----cCcCcccEEEEeCCchhHHHHHhcCCCCCEEEEECchHHHHHHHHH
Confidence 999999999999999999999999999986 7 99999999996 55678889999999999999999999999876
Q ss_pred cC----CCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccChhhHHHHHHHHHHcCc----
Q 005041 503 TK----IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV---- 573 (717)
Q Consensus 503 a~----~p~~lElGGk~p~iV~~dADl~~A~~~i~~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~---- 573 (717)
+. +|+++|||||||+||++|||++.|++.+++|+|.|+| .|+|++|||||+++| |+|+++|+++++++.+
T Consensus 243 aa~~~~~~~~lElGG~~p~iV~~dADl~~Aa~~i~~~~~~naGQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~G~p~ 321 (481)
T cd07143 243 AAKSNLKKVTLELGGKSPNIVFDDADLESAVVWTAYGIFFNHGQVCCAGSRIYVQEGIY-DKFVKRFKEKAKKLKVGDPF 321 (481)
T ss_pred HHHhcCCEEEeecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEeHhHH-HHHHHHHHHHHHhcCCCCCC
Confidence 63 6999999999999999999999999999999999987 999999999999999 8999999999887531
Q ss_pred ------------------------------eE-ecCccc--cc-cc-c-C-----CCCccccccccCceEEEEEeCCHHH
Q 005041 574 ------------------------------GL-FGGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRA 612 (717)
Q Consensus 574 ------------------------------~~-~g~~~~--~~-~~-p-i-----~~~~~~~eE~FGPVl~v~~~~~~de 612 (717)
++ .|+... .+ |+ | | +++++++||+||||++|++|+|+||
T Consensus 322 ~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~e 401 (481)
T cd07143 322 AEDTFQGPQVSQIQYERIMSYIESGKAEGATVETGGKRHGNEGYFIEPTIFTDVTEDMKIVKEEIFGPVVAVIKFKTEEE 401 (481)
T ss_pred CCCCCCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCCCCCCCceEEeeEEEecCCCCChhhhcCCcCCeEEEEeeCCHHH
Confidence 11 133221 23 33 5 2 3588999999999999999999999
Q ss_pred HHHHHHhcCCCceeEEEecCHHHHHHHHhcCCeeeEEEcCCCCCCCCCccCCccccccccCcccccccchhhcccEEEEE
Q 005041 613 AIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWI 692 (717)
Q Consensus 613 Ai~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v 692 (717)
||+++|+++|||++||||+|.+++.++++++++|+|+||++....+.+||||.+.||+| +++|.+|+++||+.|++
T Consensus 402 ai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G----~~~G~~~l~~~t~~k~i 477 (481)
T cd07143 402 AIKRANDSTYGLAAAVFTNNINNAIRVANALKAGTVWVNCYNLLHHQVPFGGYKQSGIG----RELGEYALENYTQIKAV 477 (481)
T ss_pred HHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCCCCccccccC----cccHHHHHHHHhCeEEE
Confidence 99999999999999999999999999999999999999998777778899999999986 35699999999999998
Q ss_pred Eec
Q 005041 693 LRG 695 (717)
Q Consensus 693 ~~~ 695 (717)
.++
T Consensus 478 ~~~ 480 (481)
T cd07143 478 HIN 480 (481)
T ss_pred EEe
Confidence 763
No 41
>cd07144 ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like. NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD.
Probab=100.00 E-value=7.4e-73 Score=639.32 Aligned_cols=397 Identities=17% Similarity=0.225 Sum_probs=339.7
Q ss_pred HHHhcCCcceEEEecCCcccccHhhHHHHHHHHHHHHHH-HhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHh
Q 005041 270 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRR-LQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 348 (717)
Q Consensus 270 ~~~~tg~~iGT~i~a~~~~~~~~~~v~~av~~A~~A~~~-w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~ 348 (717)
.+|.+++.++++...+ .+|+++++++|++||+. |+++|.++|.++|++++++|++|+++|++++.+|++++..
T Consensus 28 ~~P~tg~~i~~~~~~~------~~~v~~ai~~A~~A~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~Gk~~~ 101 (484)
T cd07144 28 VNPSTGEVIASVYAAG------EEDVDKAVKAARKAFESWWSKVTGEERGELLDKLADLVEKNRDLLAAIEALDSGKPYH 101 (484)
T ss_pred ECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHhhHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChH
Confidence 5678999999998888 88999999999999996 8899999999999999999999999999998877655421
Q ss_pred hchhHHHHHHhhcChhHHHHHHHHHHHHhcccccc-cccccccccCCCceEEEeecceeEEEEEcCC-Cch-hHHHHHHH
Q 005041 349 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEPI-GQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 425 (717)
Q Consensus 349 ~g~~~a~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ 425 (717)
++. ..++..+++.++++++..+.. +...+. ..+...+.+|+|+|||++|+|| ||. +++++++|
T Consensus 102 ----~~~-------~~ev~~~~~~l~~~~~~~~~~~g~~~~~---~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~ 167 (484)
T cd07144 102 ----SNA-------LGDLDEIIAVIRYYAGWADKIQGKTIPT---SPNKLAYTLHEPYGVCGQIIPWNYPLAMAAWKLAP 167 (484)
T ss_pred ----HHH-------HHHHHHHHHHHHHHHHHHHHhcCceecC---CCCceEEEEEecceEEEEECcCCCHHHHHHHHHHH
Confidence 111 235666777777766544322 322221 1234467889999999999998 796 56799999
Q ss_pred HHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHhhc
Q 005041 426 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST 503 (717)
Q Consensus 426 ALaaGN~vVlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a 503 (717)
||++||+||+|||+.+|+++..+.+++.+ + +|+|++|+|+| +.++++.|..||+||+|+||||+.+|+.|++.+
T Consensus 168 ALaaGN~VV~Kps~~~p~~~~~l~~~~~~----aglP~gv~~~v~g~~~~~~~~L~~~~~vd~V~fTGS~~~g~~i~~~a 243 (484)
T cd07144 168 ALAAGNTVVIKPAENTPLSLLYFANLVKE----AGFPPGVVNIIPGYGAVAGSALAEHPDVDKIAFTGSTATGRLVMKAA 243 (484)
T ss_pred HHHcCCEEEEECCccchHHHHHHHHHHHH----hCcCCCcEEEEecCCchHHHHHhcCCCcCEEEEECcHHHHHHHHHHH
Confidence 99999999999999999999999999987 7 99999999996 566888899999999999999999999998876
Q ss_pred ---CCCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccChhhHHHHHHHHHH-cC------
Q 005041 504 ---KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQH-EG------ 572 (717)
Q Consensus 504 ---~~p~~lElGGk~p~iV~~dADl~~A~~~i~~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~-~~------ 572 (717)
.+|+++|||||||+||++|||++.|++.+++|+|.|+| .|+|++|||||+++| |+|+++|++++++ ++
T Consensus 244 ~~~~~~~~lElGGk~p~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~~G~p~~ 322 (484)
T cd07144 244 AQNLKAVTLECGGKSPALVFEDADLDQAVKWAAAGIMYNSGQNCTATSRIYVQESIY-DKFVEKFVEHVKQNYKVGSPFD 322 (484)
T ss_pred HhcCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCceEEEcHHHH-HHHHHHHHHHHHhhCCcCCCCC
Confidence 48999999999999999999999999999999999987 999999999999999 8999999999874 32
Q ss_pred ----------------------------ceE-ecCccc-----ccc-c-c-C-----CCCccccccccCceEEEEEeCCH
Q 005041 573 ----------------------------VGL-FGGPRA-----SKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVDDV 610 (717)
Q Consensus 573 ----------------------------~~~-~g~~~~-----~~~-~-p-i-----~~~~~~~eE~FGPVl~v~~~~~~ 610 (717)
.++ +|+... .++ + | | ++|++++||+||||++|++|+|+
T Consensus 323 ~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~ 402 (484)
T cd07144 323 DDTVVGPQVSKTQYDRVLSYIEKGKKEGAKLVYGGEKAPEGLGKGYFIPPTIFTDVPQDMRIVKEEIFGPVVVISKFKTY 402 (484)
T ss_pred CCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCcccCCCCceECCEEEeCCCCCCchhhCCCCCceEEEeccCCH
Confidence 122 244321 233 3 5 2 35899999999999999999999
Q ss_pred HHHHHHHHhcCCCceeEEEecCHHHHHHHHhcCCeeeEEEcCCCCCCCCCccCCccccccccCcccccccchhhcccEEE
Q 005041 611 RAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTR 690 (717)
Q Consensus 611 deAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k 690 (717)
||||+++|+++|||++||||+|.+++.++++++++|+|+||+++...+.+||||.+.||+| +++|++|+++||+.|
T Consensus 403 ~eai~~~n~~~~gLsa~i~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G----~~~g~~~l~~~t~~k 478 (484)
T cd07144 403 EEAIKKANDTTYGLAAAVFTKDIRRAHRVARELEAGMVWINSSNDSDVGVPFGGFKMSGIG----RELGEYGLETYTQTK 478 (484)
T ss_pred HHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcCEEEECCCCCCCCCCCcCCcccCcCC----CCchHHHHHHhhceE
Confidence 9999999999999999999999999999999999999999998766677899999999986 346999999999999
Q ss_pred EEEec
Q 005041 691 WILRG 695 (717)
Q Consensus 691 ~v~~~ 695 (717)
+|.++
T Consensus 479 ~v~~~ 483 (484)
T cd07144 479 AVHIN 483 (484)
T ss_pred EEEEe
Confidence 99763
No 42
>cd07110 ALDH_F10_BADH Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like. Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine.
Probab=100.00 E-value=8.7e-73 Score=634.92 Aligned_cols=395 Identities=18% Similarity=0.222 Sum_probs=335.3
Q ss_pred HHHhcCCcceEEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhh
Q 005041 270 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 349 (717)
Q Consensus 270 ~~~~tg~~iGT~i~a~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~ 349 (717)
.+|++++.++++..++ .+|+++++++|++||+.|+++|.++|.++|++++++|++|.++|++++.+|+|++..
T Consensus 2 ~~P~t~~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~- 74 (456)
T cd07110 2 INPATEATIGEIPAAT------AEDVDAAVRAARRAFPRWKKTTGAERAKYLRAIAEGVRERREELAELEARDNGKPLD- 74 (456)
T ss_pred cCCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH-
Confidence 3578999999998888 899999999999999999999999999999999999999999999999887755421
Q ss_pred chhHHHHHHhhcChhHHHHHHHHHHHHhcccccc----cccccccccCCCceEEEeecceeEEEEEcCC-Cch-hHHHHH
Q 005041 350 GYAKSLVSRLALKPGKISSLAKSIRILADMEEPI----GQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIA 423 (717)
Q Consensus 350 g~~~a~~~~~~~~~~~i~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~ 423 (717)
++. .|+..+++.+++++...+.. +...+. ...+...+++|+|+|||++|+|| ||. +.++++
T Consensus 75 ---~a~--------~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~ 141 (456)
T cd07110 75 ---EAA--------WDVDDVAGCFEYYADLAEQLDAKAERAVPL--PSEDFKARVRREPVGVVGLITPWNFPLLMAAWKV 141 (456)
T ss_pred ---HHH--------HHHHHHHHHHHHHHHHHHHhhccCCccccC--CCCCceeEEEEecceeEEEECCCChHHHHHHHHH
Confidence 221 24455555555554332211 111111 11244567889999999999998 796 567899
Q ss_pred HHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHh
Q 005041 424 SLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKE 501 (717)
Q Consensus 424 ~~ALaaGN~vVlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~ 501 (717)
++||++||+||+|||+.||+|+..+++++.+ + +|+|++|+|++ +++.++.|..||++|+|+||||+.+|+.|++
T Consensus 142 ~~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~----aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~ 217 (456)
T cd07110 142 APALAAGCTVVLKPSELTSLTELELAEIAAE----AGLPPGVLNVVTGTGDEAGAPLAAHPGIDKISFTGSTATGSQVMQ 217 (456)
T ss_pred HHHHHcCCEEEEECcccchHHHHHHHHHHHH----cCCCCCcEEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHH
Confidence 9999999999999999999999999999987 7 99999999996 5567888889999999999999999999998
Q ss_pred hcC---CCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccChhhHHHHHHHHHHcCc----
Q 005041 502 STK---IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV---- 573 (717)
Q Consensus 502 ~a~---~p~~lElGGk~p~iV~~dADl~~A~~~i~~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~---- 573 (717)
++. +|+++|||||||+||++|||+|.|++.+++++|.|+| .|++++|+|||+++| |+|+++|+++++++.+
T Consensus 218 ~aa~~~~~~~lElgG~~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~g~p~ 296 (456)
T cd07110 218 AAAQDIKPVSLELGGKSPIIVFDDADLEKAVEWAMFGCFWNNGQICSATSRLLVHESIA-DAFLERLATAAEAIRVGDPL 296 (456)
T ss_pred HHhhcCCeEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCceEEEcHHHH-HHHHHHHHHHHHhcCCCCCC
Confidence 773 8999999999999999999999999999999999987 999999999999999 8999999999876521
Q ss_pred ------------------------------eE-ecCccc----cccc--c-C-----CCCccccccccCceEEEEEeCCH
Q 005041 574 ------------------------------GL-FGGPRA----SKLL--Q-I-----PETRLFHHEYNSMVCTVEIVDDV 610 (717)
Q Consensus 574 ------------------------------~~-~g~~~~----~~~~--p-i-----~~~~~~~eE~FGPVl~v~~~~~~ 610 (717)
++ .|+... .++| | | ++|++++||+||||++|++|+|+
T Consensus 297 ~~~~~~Gpli~~~~~~~~~~~v~~a~~~Ga~~~~gg~~~~~~~~~~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~ 376 (456)
T cd07110 297 EEGVRLGPLVSQAQYEKVLSFIARGKEEGARLLCGGRRPAHLEKGYFIAPTVFADVPTDSRIWREEIFGPVLCVRSFATE 376 (456)
T ss_pred CCCCCcCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCCcccccCCCCcCCCEEEecCCCCChHhhCCCcCCeEEEEecCCH
Confidence 12 233321 2333 5 2 35889999999999999999999
Q ss_pred HHHHHHHHhcCCCceeEEEecCHHHHHHHHhcCCeeeEEEcCCCCCCCCCccCCccccccccCcccccccchhhcccEEE
Q 005041 611 RAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTR 690 (717)
Q Consensus 611 deAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k 690 (717)
||||+++|+++|||++||||+|.+++.++++++++|+|+||+++...+.+||||.+.||+| +++|++|+++||+.|
T Consensus 377 ~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G----~~~g~~~l~~~~~~k 452 (456)
T cd07110 377 DEAIALANDSEYGLAAAVISRDAERCDRVAEALEAGIVWINCSQPCFPQAPWGGYKRSGIG----RELGEWGLDNYLEVK 452 (456)
T ss_pred HHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCcccccCC----ccchHHHHHHhccee
Confidence 9999999999999999999999999999999999999999987766677899999999986 356999999999999
Q ss_pred EEE
Q 005041 691 WIL 693 (717)
Q Consensus 691 ~v~ 693 (717)
++.
T Consensus 453 ~i~ 455 (456)
T cd07110 453 QIT 455 (456)
T ss_pred EEe
Confidence 985
No 43
>cd07152 ALDH_BenzADH NAD-dependent benzaldehyde dehydrogenase II-like. NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids.
Probab=100.00 E-value=1.1e-72 Score=631.90 Aligned_cols=391 Identities=20% Similarity=0.229 Sum_probs=332.2
Q ss_pred CCcceEEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhhchhHH
Q 005041 275 GKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKS 354 (717)
Q Consensus 275 g~~iGT~i~a~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~g~~~a 354 (717)
++.++++..++ .+|+++++++|++||+.|+++|.++|.++|++++++|++|+++|++++++|+|++.. ++
T Consensus 1 ~~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~----~a 70 (443)
T cd07152 1 GAVLGEVGVAD------AADVDRAAARAAAAQRAWAATPPRERAAVLRRAADLLEEHADEIADWIVRESGSIRP----KA 70 (443)
T ss_pred CCEEEEEcCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHH----HH
Confidence 35678877777 899999999999999999999999999999999999999999999999888765421 11
Q ss_pred HHHHhhcChhHHHHHHHHHHHHhcccc-cccccccccccCCCceEEEeecceeEEEEEcCC-Cch-hHHHHHHHHHHhCC
Q 005041 355 LVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGN 431 (717)
Q Consensus 355 ~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGN 431 (717)
..|+..+++.+++++...+ ..+...+. ..+...+.+|+|+|||++|+|| ||. +.+++++|||++||
T Consensus 71 --------~~ev~~~i~~l~~~~~~~~~~~~~~~~~---~~g~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN 139 (443)
T cd07152 71 --------GFEVGAAIGELHEAAGLPTQPQGEILPS---APGRLSLARRVPLGVVGVISPFNFPLILAMRSVAPALALGN 139 (443)
T ss_pred --------HHHHHHHHHHHHHHHHhHHHhCCccccc---cCCceeEEEEecceEEEEECCCCcHHHHHHHHHHHHHHcCC
Confidence 2367777788887765432 33332221 1344567889999999999998 685 56799999999999
Q ss_pred EEEEeCCcchHHHH-HHHHHHHHHhcccc-cCcCceEEecCCChhhhhhcCCCCccEEEeecCHHHHHHHHhhc---CCC
Q 005041 432 GLLLKGGKEAMRSN-AILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST---KIP 506 (717)
Q Consensus 432 ~vVlKps~~tp~t~-~~l~~~~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a---~~p 506 (717)
+||+|||+++|+|+ ..+++++.+ + +|+|++|+|+++.++++.|..||++|+|+||||+.+|+.|++.+ .+|
T Consensus 140 ~VvlKps~~~p~~~~~~l~~~~~~----ag~P~gvv~~v~g~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~ 215 (443)
T cd07152 140 AVVLKPDPRTPVSGGVVIARLFEE----AGLPAGVLHVLPGGADAGEALVEDPNVAMISFTGSTAVGRKVGEAAGRHLKK 215 (443)
T ss_pred EEEEECCcccchhHHHHHHHHHHH----hCcCcCcEEEecCChHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCc
Confidence 99999999999996 788899886 7 99999999997556788888899999999999999999998876 389
Q ss_pred EEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccChhhHHHHHHHHHHcCce-----------
Q 005041 507 VLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGVG----------- 574 (717)
Q Consensus 507 ~~lElGGk~p~iV~~dADl~~A~~~i~~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~~----------- 574 (717)
+++|||||||+||++|||+|.|++.+++++|.|+| .|++++|||||+++| |+|+++|+++++++.+.
T Consensus 216 ~~lElGGk~~~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-~~f~~~l~~~~~~~~~g~p~~~~~~~gp 294 (443)
T cd07152 216 VSLELGGKNALIVLDDADLDLAASNGAWGAFLHQGQICMAAGRHLVHESVA-DAYTAKLAAKAKHLPVGDPATGQVALGP 294 (443)
T ss_pred EEEECCCCCeEEECCCCCHHHHHHHHHHHHHhhcCCCCcCCeeEEEcHHHH-HHHHHHHHHHHHhCCCCCCCCCCCCcCC
Confidence 99999999999999999999999999999999987 999999999999999 89999999999876321
Q ss_pred -----------------------E-ecCccccccc-c-C-----CCCccccccccCceEEEEEeCCHHHHHHHHHhcCCC
Q 005041 575 -----------------------L-FGGPRASKLL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSA 623 (717)
Q Consensus 575 -----------------------~-~g~~~~~~~~-p-i-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~G 623 (717)
+ .|+.....|+ | | ++|++++||+||||++|++|+|+||||+++|+++||
T Consensus 295 li~~~~~~~v~~~i~~a~~~Ga~vl~gg~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~g 374 (443)
T cd07152 295 LINARQLDRVHAIVDDSVAAGARLEAGGTYDGLFYRPTVLSGVKPGMPAFDEEIFGPVAPVTVFDSDEEAVALANDTEYG 374 (443)
T ss_pred CcCHHHHHHHHHHHHHHHhCCCEEEeccCcCCEEEcCEEEecCCCCChhhhccccCCeEEEEeeCCHHHHHHHHhCCCcc
Confidence 1 1222111133 5 2 358999999999999999999999999999999999
Q ss_pred ceeEEEecCHHHHHHHHhcCCeeeEEEcCCCCCC-CCCccCCccccccccCcccccccchhhcccEEEEEEe
Q 005041 624 HTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFC-DGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILR 694 (717)
Q Consensus 624 L~a~I~t~d~~~a~~~~~~l~~G~v~iN~~~~~~-~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v~~ 694 (717)
|++||||+|.+++.++++++++|.|+||+++... +..||||.+.||+|. +.+|++|+++||+.|++.+
T Consensus 375 L~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~pfGG~~~SG~G~---~~~g~~~l~~~~~~k~~~~ 443 (443)
T cd07152 375 LSAGIISRDVGRAMALADRLRTGMLHINDQTVNDEPHNPFGGMGASGNGS---RFGGPANWEEFTQWQWVTV 443 (443)
T ss_pred ceEEEECCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCcccccCCC---ccCcHHHHHHhhceeEEeC
Confidence 9999999999999999999999999999876654 568999999998851 3458999999999999753
No 44
>cd07097 ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like. Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group.
Probab=100.00 E-value=1.2e-72 Score=635.79 Aligned_cols=399 Identities=20% Similarity=0.194 Sum_probs=340.2
Q ss_pred hHHHHhc-CCcceEEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
Q 005041 268 SIIKVLE-GKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAA 346 (717)
Q Consensus 268 ~l~~~~t-g~~iGT~i~a~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~ 346 (717)
.+.+|.+ ++.++++..++ .+|+++++++|++||+.|+++|.++|.++|++++++|++|+++|++++++|.|++
T Consensus 17 ~v~~P~~~~~~i~~~~~~~------~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~ 90 (473)
T cd07097 17 ENRNPSDTSDVVGKYARAS------AEDADAAIAAAAAAFPAWRRTSPEARADILDKAGDELEARKEELARLLTREEGKT 90 (473)
T ss_pred eeECCCCCCeEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCC
Confidence 3467884 89999988888 8999999999999999999999999999999999999999999999998877655
Q ss_pred HhhchhHHHHHHhhcChhHHHHHHHHHHHHhccccc-ccccccccccCCCceEEEeecceeEEEEEcCC-Cch-hHHHHH
Q 005041 347 QEAGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIA 423 (717)
Q Consensus 347 ~~~g~~~a~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~ 423 (717)
.. ++ ..|+..+++.+++++...+. .+...+. ...+...+++++|+|||++|+|| ||. +.++++
T Consensus 91 ~~----~a--------~~ev~~~~~~l~~~a~~~~~~~g~~~~~--~~~~~~~~~~~~P~GVv~~I~P~N~Pl~~~~~~i 156 (473)
T cd07097 91 LP----EA--------RGEVTRAGQIFRYYAGEALRLSGETLPS--TRPGVEVETTREPLGVVGLITPWNFPIAIPAWKI 156 (473)
T ss_pred HH----HH--------HHHHHHHHHHHHHHHHHHHHhcCccccc--CCCCceEEEEEEeeeeEEEEcccChHHHHHHHHH
Confidence 32 22 23666777777777654332 2322211 11244567889999999999998 786 567999
Q ss_pred HHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHh
Q 005041 424 SLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKE 501 (717)
Q Consensus 424 ~~ALaaGN~vVlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~ 501 (717)
+|||++||+||+|||+.+|+|+.++++++.+ + +|+|++|+|+| +.++++.|..||+||+|+||||+++|+.|++
T Consensus 157 ~~ALaaGN~VIlKps~~~p~~~~~l~~~~~~----aGlP~gvv~vv~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~ 232 (473)
T cd07097 157 APALAYGNTVVFKPAELTPASAWALVEILEE----AGLPAGVFNLVMGSGSEVGQALVEHPDVDAVSFTGSTAVGRRIAA 232 (473)
T ss_pred HHHHHcCCEEEEeCCCCCcHHHHHHHHHHHH----cCCCCcceEEeccCchHHHHHHhcCCCCCEEEEECcHHHHHHHHH
Confidence 9999999999999999999999999999987 7 99999999996 5567888888999999999999999999988
Q ss_pred hc---CCCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccChhhHHHHHHHHHHcCc----
Q 005041 502 ST---KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV---- 573 (717)
Q Consensus 502 ~a---~~p~~lElGGk~p~iV~~dADl~~A~~~i~~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~---- 573 (717)
.+ .||+++|||||||+||++|||++.|++.+++++|.|+| .|++++|+|||+++| |+|+++|+++++++.+
T Consensus 233 ~aa~~~~~~~lElGGk~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~g~p~ 311 (473)
T cd07097 233 AAAARGARVQLEMGGKNPLVVLDDADLDLAVECAVQGAFFSTGQRCTASSRLIVTEGIH-DRFVEALVERTKALKVGDAL 311 (473)
T ss_pred HHhccCCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCcCCeeEEEehhHH-HHHHHHHHHHHHhCCCCCCC
Confidence 77 48999999999999999999999999999999999987 999999999999999 8999999999887632
Q ss_pred ------------------------------eE-ecCccc----ccc-c-c-C-----CCCccccccccCceEEEEEeCCH
Q 005041 574 ------------------------------GL-FGGPRA----SKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVDDV 610 (717)
Q Consensus 574 ------------------------------~~-~g~~~~----~~~-~-p-i-----~~~~~~~eE~FGPVl~v~~~~~~ 610 (717)
++ .|+... .++ + | | +++++++||+||||++|++|+|+
T Consensus 312 ~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~ 391 (473)
T cd07097 312 DEGVDIGPVVSERQLEKDLRYIEIARSEGAKLVYGGERLKRPDEGYYLAPALFAGVTNDMRIAREEIFGPVAAVIRVRDY 391 (473)
T ss_pred CCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCCeEEeeEEeccCCCCChhhhCCCcCceEEEeccCCH
Confidence 11 233221 133 3 5 2 35899999999999999999999
Q ss_pred HHHHHHHHhcCCCceeEEEecCHHHHHHHHhcCCeeeEEEcCCCCC-CCCCccCCccccccccCcccccccchhhcccEE
Q 005041 611 RAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRF-CDGARFGLGAEVGISTSRIHARGPVGVEGLLTT 689 (717)
Q Consensus 611 deAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~v~iN~~~~~-~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~ 689 (717)
||||+++|+++|||++||||+|.+++.++++++++|+|+||+++.. .+.+||||.+.||+|. +++|.+|+++||+.
T Consensus 392 ~eai~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~~g~v~iN~~~~~~~~~~PfGG~~~SG~G~---~~~g~~~l~~f~~~ 468 (473)
T cd07097 392 DEALAIANDTEFGLSAGIVTTSLKHATHFKRRVEAGVVMVNLPTAGVDYHVPFGGRKGSSYGP---REQGEAALEFYTTI 468 (473)
T ss_pred HHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCcccccCcc---cCCcHHHHHHhhce
Confidence 9999999999999999999999999999999999999999987654 3578999999999861 24689999999999
Q ss_pred EEEEe
Q 005041 690 RWILR 694 (717)
Q Consensus 690 k~v~~ 694 (717)
|+|.+
T Consensus 469 k~v~~ 473 (473)
T cd07097 469 KTVYV 473 (473)
T ss_pred eEEeC
Confidence 99863
No 45
>cd07145 ALDH_LactADH_F420-Bios Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like. NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD.
Probab=100.00 E-value=1.3e-72 Score=633.39 Aligned_cols=398 Identities=19% Similarity=0.250 Sum_probs=337.0
Q ss_pred HHHhcCCcceEEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhh
Q 005041 270 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 349 (717)
Q Consensus 270 ~~~~tg~~iGT~i~a~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~ 349 (717)
.+|.+++.++++...+ .+|+++++++|++||+.|+++|.++|.++|++++++|++|+++|++++.+|++++..
T Consensus 4 ~~P~t~~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~- 76 (456)
T cd07145 4 RNPANGEVIDTVPSLS------REEVREAIEVAEKAKDVMSNLPAYKRYKILMKVAELIERRKEELAKLLTIEVGKPIK- 76 (456)
T ss_pred cCCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHH-
Confidence 4678899999998888 899999999999999999999999999999999999999999999998877765432
Q ss_pred chhHHHHHHhhcChhHHHHHHHHHHHHhcccc-cccccccccc--cCCCceEEEeecceeEEEEEcCC-Cch-hHHHHHH
Q 005041 350 GYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTE--LADGLILEKTSCPLGVLLIVFES-RPD-ALVQIAS 424 (717)
Q Consensus 350 g~~~a~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~ 424 (717)
++ ..|+..+++.++++++..+ ..++..+... ...+...+++++|+|||++|+|| ||. +.+++++
T Consensus 77 ---~a--------~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~ 145 (456)
T cd07145 77 ---QS--------RVEVERTIRLFKLAAEEAKVLRGETIPVDAYEYNERRIAFTVREPIGVVGAITPFNFPANLFAHKIA 145 (456)
T ss_pred ---HH--------HHHHHHHHHHHHHHHHHHHHhcCccccCccccccCCceeEEEEecceeEEEECCCChHHHHHHHHHH
Confidence 22 1256666666666654332 1122211100 01133467889999999999998 686 5678999
Q ss_pred HHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHhh
Q 005041 425 LAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKES 502 (717)
Q Consensus 425 ~ALaaGN~vVlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~ 502 (717)
+||++||+||+|||+.+|+|+.++++++++ + +|+|++|+|+| +.++++.|..||++++|+||||+++|+.|++.
T Consensus 146 ~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~----ag~p~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~ 221 (456)
T cd07145 146 PAIAVGNSVVVKPSSNTPLTAIELAKILEE----AGLPPGVINVVTGYGSEVGDEIVTNPKVNMISFTGSTAVGLLIASK 221 (456)
T ss_pred HHHHcCCEEEEECCccchHHHHHHHHHHHH----cCCCcccEEEEeCCCchHHHHHhcCCCCCEEEEECCHHHHHHHHHH
Confidence 999999999999999999999999999987 7 99999999996 56788888899999999999999999999987
Q ss_pred cC---CCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccChhhHHHHHHHHHHcCc-----
Q 005041 503 TK---IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV----- 573 (717)
Q Consensus 503 a~---~p~~lElGGk~p~iV~~dADl~~A~~~i~~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~----- 573 (717)
+. +|+++|||||||+||++|||++.|++.+++++|.|+| .|++++|||||+++| |+|+++|+++++++.+
T Consensus 222 aa~~~~~v~lElgG~n~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~g~p~~ 300 (456)
T cd07145 222 AGGTGKKVALELGGSDPMIVLKDADLERAVSIAVRGRFENAGQVCNAVKRILVEEEVY-DKFLKLLVEKVKKLKVGDPLD 300 (456)
T ss_pred HhhcCCceEEecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCccCeeEEEcHHHH-HHHHHHHHHHHhcCCcCCCCC
Confidence 74 9999999999999999999999999999999999987 999999999999999 8999999999887531
Q ss_pred -----------------------------eE-ecCccccc-cc-c-C-----CCCccccccccCceEEEEEeCCHHHHHH
Q 005041 574 -----------------------------GL-FGGPRASK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAID 615 (717)
Q Consensus 574 -----------------------------~~-~g~~~~~~-~~-p-i-----~~~~~~~eE~FGPVl~v~~~~~~deAi~ 615 (717)
++ .|+....+ ++ | | ++|++++||+||||++|++|+|+||||+
T Consensus 301 ~~~~~gpli~~~~~~~~~~~i~~a~~~ga~vl~gg~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~ 380 (456)
T cd07145 301 ESTDLGPLISPEAVERMENLVNDAVEKGGKILYGGKRDEGSFFPPTVLENDTPDMIVMKEEVFGPVLPIAKVKDDEEAVE 380 (456)
T ss_pred CCCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCeEECCEeecCCCCCChHhhCCCCCceEEEEEECCHHHHHH
Confidence 11 23322213 33 5 3 3588999999999999999999999999
Q ss_pred HHHhcCCCceeEEEecCHHHHHHHHhcCCeeeEEEcCCCCCC-CCCccCCccccccccCcccccccchhhcccEEEEEEe
Q 005041 616 HIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFC-DGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILR 694 (717)
Q Consensus 616 ~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~v~iN~~~~~~-~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v~~ 694 (717)
++|+++|||++||||+|.+++.++++++++|.|+||+.+... +.+||||.+.||+| +++|++|+++|++.|+|.+
T Consensus 381 ~~n~~~~gL~~~v~t~d~~~~~~~~~~~~~g~v~vN~~~~~~~~~~pfgG~~~SG~G----~~~g~~~l~~f~~~k~v~~ 456 (456)
T cd07145 381 IANSTEYGLQASVFTNDINRALKVARELEAGGVVINDSTRFRWDNLPFGGFKKSGIG----REGVRYTMLEMTEEKTIVI 456 (456)
T ss_pred HHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCcccccCC----cCchHHHHHHhhceeEEeC
Confidence 999999999999999999999999999999999999876543 57899999999986 3569999999999999863
No 46
>PLN00412 NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional
Probab=100.00 E-value=1.6e-72 Score=635.91 Aligned_cols=404 Identities=18% Similarity=0.196 Sum_probs=334.8
Q ss_pred hHHHHhcCCcceEEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
Q 005041 268 SIIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQ 347 (717)
Q Consensus 268 ~l~~~~tg~~iGT~i~a~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~ 347 (717)
.+.+|.+++.++++..++ .+|+++++++|++||++|++++..+|.++|++++++|++|+++|++++++|++++.
T Consensus 34 ~~~~P~t~~~i~~~~~a~------~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~el~~~~~~e~Gk~~ 107 (496)
T PLN00412 34 AITNPSTRKTQYKVQACT------QEEVNKAMESAKAAQKAWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPA 107 (496)
T ss_pred EeECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH
Confidence 346788999999888888 89999999999999999999999999999999999999999999999999887764
Q ss_pred hhchhHHHHHHhhcChhHHHHHHHHHHHHhcccccccccccccccC---CCceEEEeecceeEEEEEcCC-Cch-hHHHH
Q 005041 348 EAGYAKSLVSRLALKPGKISSLAKSIRILADMEEPIGQILKRTELA---DGLILEKTSCPLGVLLIVFES-RPD-ALVQI 422 (717)
Q Consensus 348 ~~g~~~a~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~ 422 (717)
. ++. .++......+++.++....+... +...+....+ .+...+++|+|+|||++|+|| ||. +++++
T Consensus 108 ~----~a~-~Ev~~~~~~l~~~a~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~ 178 (496)
T PLN00412 108 K----DAV-TEVVRSGDLISYTAEEGVRILGE----GKFLVSDSFPGNERNKYCLTSKIPLGVVLAIPPFNYPVNLAVSK 178 (496)
T ss_pred H----HHH-HHHHHHHHHHHHHHHHHHHHhcC----CcccccccCCCccCCceeEEEEecceEEEEECCCCchHHHHHHH
Confidence 3 221 11211223333333333222110 1111100001 122456789999999999998 685 67899
Q ss_pred HHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHH
Q 005041 423 ASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIK 500 (717)
Q Consensus 423 ~~~ALaaGN~vVlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~ 500 (717)
++|||++||+||+|||+.+|+++..+++++.+ + +|+|++|+|++ +.+++++|..||+||+|+|||| ++|+.|+
T Consensus 179 i~~ALaaGN~VIlKPs~~t~~~~~~l~~~l~~----aglP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs-~~g~~v~ 253 (496)
T PLN00412 179 IAPALIAGNAVVLKPPTQGAVAALHMVHCFHL----AGFPKGLISCVTGKGSEIGDFLTMHPGVNCISFTGG-DTGIAIS 253 (496)
T ss_pred HHHHHHcCCEEEEECCccCcHHHHHHHHHHHH----hCCCcccEEEEecCchHHHHHHhcCCCcCEEEEeCh-HHHHHHH
Confidence 99999999999999999999999999999986 7 99999999996 5568888999999999999999 9999999
Q ss_pred hhc-CCCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccChhhHHHHHHHHHHcCce----
Q 005041 501 EST-KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGVG---- 574 (717)
Q Consensus 501 ~~a-~~p~~lElGGk~p~iV~~dADl~~A~~~i~~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~~---- 574 (717)
+.+ .+|+++|||||||+||++|||+|.|++.+++++|.|+| +|+|++|+|||+++| |+|+++|+++++++.+.
T Consensus 254 ~~a~~~~~~lElGG~~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~g~p~~ 332 (496)
T PLN00412 254 KKAGMVPLQMELGGKDACIVLEDADLDLAAANIIKGGFSYSGQRCTAVKVVLVMESVA-DALVEKVNAKVAKLTVGPPED 332 (496)
T ss_pred HHhCCCcEEEEcCCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCCccCeEEEEcHHHH-HHHHHHHHHHHHhCccCCCcc
Confidence 887 49999999999999999999999999999999999987 999999999999999 79999999998876421
Q ss_pred -----------------------------Ee-cCccccccc-c-C-----CCCccccccccCceEEEEEeCCHHHHHHHH
Q 005041 575 -----------------------------LF-GGPRASKLL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHI 617 (717)
Q Consensus 575 -----------------------------~~-g~~~~~~~~-p-i-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~a 617 (717)
+. |+.....|+ | | ++|++++||+||||++|++|+|+||||+++
T Consensus 333 ~~~~gp~i~~~~~~~v~~~i~~a~~~Ga~~l~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~~deai~~a 412 (496)
T PLN00412 333 DCDITPVVSESSANFIEGLVMDAKEKGATFCQEWKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHC 412 (496)
T ss_pred cCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEecCCCCCeEEecEEEeCCCCCCHHHhCcCCCCeEEEEEeCCHHHHHHHH
Confidence 11 111111123 5 2 468999999999999999999999999999
Q ss_pred HhcCCCceeEEEecCHHHHHHHHhcCCeeeEEEcCCCC-CCCCCccCCccccccccCcccccccchhhcccEEEEEEecC
Q 005041 618 HQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTR-FCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGN 696 (717)
Q Consensus 618 N~~~~GL~a~I~t~d~~~a~~~~~~l~~G~v~iN~~~~-~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v~~~~ 696 (717)
|+++|||++||||+|.+++.++++++++|+|+||++.. ..+.+||||.+.||+|+ ++|.+|+++||+.|+++++.
T Consensus 413 n~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~~~PfGG~k~SG~G~----~~g~~~~~~ft~~k~i~~~~ 488 (496)
T PLN00412 413 NASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPARGPDHFPFQGLKDSGIGS----QGITNSINMMTKVKSTVINL 488 (496)
T ss_pred hCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCCCCccccccCC----CChHHHHHHhcceEEEEEec
Confidence 99999999999999999999999999999999999864 34578999999999863 46899999999999998764
No 47
>cd07147 ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1-like. Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD.
Probab=100.00 E-value=1.3e-72 Score=633.14 Aligned_cols=398 Identities=22% Similarity=0.252 Sum_probs=334.1
Q ss_pred HHHhcCCcceEEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhh
Q 005041 270 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 349 (717)
Q Consensus 270 ~~~~tg~~iGT~i~a~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~ 349 (717)
.+|.+|+.++++..++ .+|+++++++|++||+.|+++|.++|.++|++++++|++|+++|++++++|++++..
T Consensus 4 ~~P~t~~~~~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~- 76 (452)
T cd07147 4 TNPYTGEVVARVALAG------PDDIEEAIAAAVKAFRPMRALPAHRRAAILLHCVARLEERFEELAETIVLEAGKPIK- 76 (452)
T ss_pred cCCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH-
Confidence 5688999999988888 899999999999999999999999999999999999999999999998877655421
Q ss_pred chhHHHHHHhhcChhHHHHHHHHHHHHhcccc-cccccccccc--cCCCceEEEeecceeEEEEEcCC-Cch-hHHHHHH
Q 005041 350 GYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTE--LADGLILEKTSCPLGVLLIVFES-RPD-ALVQIAS 424 (717)
Q Consensus 350 g~~~a~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~ 424 (717)
++ ..|+...+..+++++.... ..++..+... ...+...+++++|+|||++|+|| ||. +.+++++
T Consensus 77 ---~a--------~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~ 145 (452)
T cd07147 77 ---DA--------RGEVARAIDTFRIAAEEATRIYGEVLPLDISARGEGRQGLVRRFPIGPVSAITPFNFPLNLVAHKVA 145 (452)
T ss_pred ---HH--------HHHHHHHHHHHHHHHHHHHHhCCcccccccccCCCCceeEEEEeceeEEEEEcCCCcHHHHHHHHHH
Confidence 22 1245555555555543221 1122111000 01234456789999999999998 685 5679999
Q ss_pred HHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecCCChhhhhhcCCCCccEEEeecCHHHHHHHHhhc
Q 005041 425 LAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST 503 (717)
Q Consensus 425 ~ALaaGN~vVlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a 503 (717)
+||++||+||+|||+.+|+|+.++++++++ + +|+|+||+|++..+.+..|..||++|+|+||||+++|+.|++.+
T Consensus 146 ~ALaaGN~VIlKps~~~p~~~~~l~~~l~~----ag~P~g~v~~v~g~~~~~~~l~~~~~v~~v~fTGs~~~g~~v~~~a 221 (452)
T cd07147 146 PAIAAGCPFVLKPASRTPLSALILGEVLAE----TGLPKGAFSVLPCSRDDADLLVTDERIKLLSFTGSPAVGWDLKARA 221 (452)
T ss_pred HHHHcCCEEEEECCCCCcHHHHHHHHHHHH----cCCCcCcEEEEeCCccchhHHhcCCCCCEEEEECCHHHHHHHHHHh
Confidence 999999999999999999999999999987 7 99999999996445677788899999999999999999999876
Q ss_pred C-CCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccChhhHHHHHHHHHHcCc--------
Q 005041 504 K-IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV-------- 573 (717)
Q Consensus 504 ~-~p~~lElGGk~p~iV~~dADl~~A~~~i~~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~-------- 573 (717)
. +|+++|||||||+||++|||+|.|++.+++++|.|+| .|++++|+|||+++| |+|+++|+++++++..
T Consensus 222 ~~~~v~lelgG~~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~-d~f~~~L~~~~~~~~~g~p~~~~~ 300 (452)
T cd07147 222 GKKKVVLELGGNAAVIVDSDADLDFAAQRIIFGAFYQAGQSCISVQRVLVHRSVY-DEFKSRLVARVKALKTGDPKDDAT 300 (452)
T ss_pred CcCceEeecCCCCcEEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEchhHH-HHHHHHHHHHHHhCCCCCCCCCCC
Confidence 4 8999999999999999999999999999999999987 999999999999999 8999999999987632
Q ss_pred --------------------------eE-ecCccccccc-c-C-----CCCccccccccCceEEEEEeCCHHHHHHHHHh
Q 005041 574 --------------------------GL-FGGPRASKLL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQ 619 (717)
Q Consensus 574 --------------------------~~-~g~~~~~~~~-p-i-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~ 619 (717)
++ .|+.....|+ | | ++|++++||+||||++|++|+|+||||+++|+
T Consensus 301 ~~gpli~~~~~~~~~~~i~~a~~~Ga~~l~gg~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~n~ 380 (452)
T cd07147 301 DVGPMISESEAERVEGWVNEAVDAGAKLLTGGKRDGALLEPTILEDVPPDMEVNCEEVFGPVVTVEPYDDFDEALAAVND 380 (452)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHCCCEEEecCCcCCEEEcCEEEeCCCCCChHHhCcCcCCeEEEEEeCCHHHHHHHHhC
Confidence 11 1222111233 5 2 35889999999999999999999999999999
Q ss_pred cCCCceeEEEecCHHHHHHHHhcCCeeeEEEcCCCCC-CCCCccCCccccccccCcccccccchhhcccEEEEEEe
Q 005041 620 HGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRF-CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILR 694 (717)
Q Consensus 620 ~~~GL~a~I~t~d~~~a~~~~~~l~~G~v~iN~~~~~-~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v~~ 694 (717)
++|||++||||+|.+++.++++++++|+|+||+++.. .+..||||.+.||+| +++|++|+++||+.|+|++
T Consensus 381 ~~~gL~~~v~t~d~~~a~~~~~~~~~G~v~vN~~~~~~~~~~pfGG~~~SG~G----~~~g~~~~~~~~~~k~i~~ 452 (452)
T cd07147 381 SKFGLQAGVFTRDLEKALRAWDELEVGGVVINDVPTFRVDHMPYGGVKDSGIG----REGVRYAIEEMTEPRLLVI 452 (452)
T ss_pred CCCCceEEEECCCHHHHHHHHHHcCcceEEECCCCCCCCCCCCcCCccccccC----CCChHHHHHHhcceeEEeC
Confidence 9999999999999999999999999999999987654 467899999999986 3569999999999999864
No 48
>PLN02203 aldehyde dehydrogenase
Probab=100.00 E-value=2.1e-72 Score=629.31 Aligned_cols=387 Identities=20% Similarity=0.216 Sum_probs=325.2
Q ss_pred HhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhhchhHHHHHHhhcChhHHHHHHH
Q 005041 292 QVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAK 371 (717)
Q Consensus 292 ~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~g~~~a~~~~~~~~~~~i~~~~~ 371 (717)
.+||++++++|++||+.|+.++..+|.++|++++++|++|+++|++++++|++++. .++...++..+...++++++
T Consensus 5 ~~~v~~av~~a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~----~ea~~~Ev~~~~~~~~~~~~ 80 (484)
T PLN02203 5 GETLEGSVAELRETYESGRTRSLEWRKSQLKGLLRLLKDNEEAIFKALHQDLGKHR----VEAYRDEVGVLTKSANLALS 80 (484)
T ss_pred HHHHHHHHHHHHHHHHhcCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH----HHHHHHHHHHHHHHHHHHHH
Confidence 78999999999999999999999999999999999999999999999998887653 23322234444555666666
Q ss_pred HHHHHhcccccccccccccccCCCceEEEeecceeEEEEEcCC-Cch-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHH
Q 005041 372 SIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILH 449 (717)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~ 449 (717)
.++.+.+... + ..+.. ..+...+++|+|+|||++|+|| ||. +.++++++||++||+||+|||+.||+|+.+++
T Consensus 81 ~~~~~~~~~~--~-~~~~~--~~~~~~~~~reP~GVv~~I~pwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~ 155 (484)
T PLN02203 81 NLKKWMAPKK--A-KLPLV--AFPATAEVVPEPLGVVLIFSSWNFPIGLSLEPLIGAIAAGNAVVLKPSELAPATSAFLA 155 (484)
T ss_pred HHHHHhcccc--c-cCCcc--cCCceeEEEEecccEEEEEcCCcchHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHH
Confidence 6665543211 0 11110 1233567899999999999998 685 56799999999999999999999999999999
Q ss_pred HHHHHhcccccCcCceEEecCCChhhhhhcCCCCccEEEeecCHHHHHHHHhhc---CCCEEEecCCcceEEEcC---CC
Q 005041 450 KVITSAIPDTVGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST---KIPVLGHADGICHVYVDK---SA 523 (717)
Q Consensus 450 ~~~~~al~~alP~gvv~vv~~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a---~~p~~lElGGk~p~iV~~---dA 523 (717)
+++.+ +||+|++|+|+|+.++++.|..|+ +|+|+||||+++|+.|++.+ .+|+++|||||||+||++ ||
T Consensus 156 ~~~~~----~lP~gvv~vv~g~~~~~~~l~~~~-vd~v~fTGS~~~G~~v~~~aa~~l~~v~lElGGknp~iV~~d~~da 230 (484)
T PLN02203 156 ANIPK----YLDSKAVKVIEGGPAVGEQLLQHK-WDKIFFTGSPRVGRIIMTAAAKHLTPVALELGGKCPCIVDSLSSSR 230 (484)
T ss_pred HHHHH----hCCcCEEEEEeCCHHHHHHHHhCC-CCEEEEECCHHHHHHHHHHHHhcCCCEEEEecCCCeEEEccCCCCC
Confidence 99986 599999999997667888888885 99999999999999999887 499999999999999997 69
Q ss_pred CHHHHHHHHHhhccC-CCc-cccccceEEEcCcccChhhHHHHHHHHHHcCc----------------------------
Q 005041 524 NLDVAKNIVIDAKID-YPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV---------------------------- 573 (717)
Q Consensus 524 Dl~~A~~~i~~~~~~-n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~---------------------------- 573 (717)
|+|.|++.+++|+|. |+| +|+|++|+|||+++| |+|+++|+++++++..
T Consensus 231 Dl~~aa~~i~~~~f~~~aGQ~C~a~~rv~V~~~i~-d~f~~~L~~~~~~~~~G~p~~~~~~Gpli~~~~~~~v~~~i~~a 309 (484)
T PLN02203 231 DTKVAVNRIVGGKWGSCAGQACIAIDYVLVEERFA-PILIELLKSTIKKFFGENPRESKSMARILNKKHFQRLSNLLKDP 309 (484)
T ss_pred CHHHHHHHHHHHhcccCCCCccccCCeEEEcHHHH-HHHHHHHHHHHHHhcCCCCCcCCCcCCCCCHHHHHHHHHHHHHH
Confidence 999999999999995 666 999999999999999 8999999999877521
Q ss_pred ----e-EecCccc-ccc-c-c-C-----CCCccccccccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEecCHHHHHHH
Q 005041 574 ----G-LFGGPRA-SKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETF 639 (717)
Q Consensus 574 ----~-~~g~~~~-~~~-~-p-i-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~I~t~d~~~a~~~ 639 (717)
. +.|+... .++ + | | ++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.++
T Consensus 310 ~~~~~~~~gg~~~~~g~~i~PTvl~~v~~d~~i~~eE~FGPVl~v~~~~~~~eai~~aN~~~~gL~a~vft~d~~~a~~~ 389 (484)
T PLN02203 310 RVAASIVHGGSIDEKKLFIEPTILLNPPLDSDIMTEEIFGPLLPIITVKKIEDSIAFINSKPKPLAIYAFTNNEKLKRRI 389 (484)
T ss_pred HhCCeEEeCCCcCCCCCEEeeEEEecCCCCCHHHhcCccCCeEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHH
Confidence 1 1233221 233 3 5 3 3589999999999999999999999999999999999999999999999999
Q ss_pred HhcCCeeeEEEcCCCCC--CCCCccCCccccccccCcccccccchhhcccEEEEEEecCc
Q 005041 640 LCQVDSAAVFHNASTRF--CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNG 697 (717)
Q Consensus 640 ~~~l~~G~v~iN~~~~~--~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v~~~~~ 697 (717)
++++++|.|+||++... .+.+||||.+.||+| +++|++|+++||+.|+|+++..
T Consensus 390 ~~~l~~G~V~IN~~~~~~~~~~~PfGG~k~SG~G----r~~g~~~l~~ft~~k~v~~~~~ 445 (484)
T PLN02203 390 LSETSSGSVTFNDAIIQYACDSLPFGGVGESGFG----RYHGKYSFDTFSHEKAVLRRSL 445 (484)
T ss_pred HHhCCcceEEECCcccccCCCCCCCCCcCcccCC----ccccHHHHHHhcceeEEEEcCc
Confidence 99999999999987543 366899999999986 3469999999999999988743
No 49
>cd07120 ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like. Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural.
Probab=100.00 E-value=8.5e-73 Score=632.25 Aligned_cols=394 Identities=20% Similarity=0.227 Sum_probs=338.2
Q ss_pred HHhcCCcceEEEecCCcccccHhhHHHHHHHHHHHHHH--HhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHh
Q 005041 271 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRR--LQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 348 (717)
Q Consensus 271 ~~~tg~~iGT~i~a~~~~~~~~~~v~~av~~A~~A~~~--w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~ 348 (717)
+|.+++.++++..++ .+|+++|+++|++||+. |+. +..+|.++|++++++|++|+++|++++++|.|++..
T Consensus 3 nP~t~~~i~~~~~~~------~~~v~~av~~A~~a~~~~~w~~-~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~ 75 (455)
T cd07120 3 DPATGEVIGTYADGG------VAEAEAAIAAARRAFDETDWAH-DPRLRARVLLELADAFEANAERLARLLALENGKILG 75 (455)
T ss_pred CCCCCCEEEEEeCCC------HHHHHHHHHHHHHhcCCCccCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHH
Confidence 578999999998888 89999999999999985 998 899999999999999999999999999888765421
Q ss_pred hchhHHHHHHhhcChhHHHHHHHHHHHHhccccc-ccccccccccCCCceEEEeecceeEEEEEcCC-Cch-hHHHHHHH
Q 005041 349 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 425 (717)
Q Consensus 349 ~g~~~a~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ 425 (717)
++ ..|+...++.+++++...+. .+...+. ..+...+++|+|+|||++|+|| ||. +.+++++|
T Consensus 76 ----~a--------~~Ev~~~i~~l~~~~~~~~~~~g~~~~~---~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~ 140 (455)
T cd07120 76 ----EA--------RFEISGAISELRYYAGLARTEAGRMIEP---EPGSFSLVLREPMGVAGIIVPWNSPVVLLVRSLAP 140 (455)
T ss_pred ----HH--------HHHHHHHHHHHHHHHHHHHHhcCccccc---CCCceEEEEEecceeEEEECCCchHHHHHHHHHHH
Confidence 22 23667777777777654332 2322211 1234567899999999999998 685 56799999
Q ss_pred HHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHhhc
Q 005041 426 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST 503 (717)
Q Consensus 426 ALaaGN~vVlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a 503 (717)
||++||+||+|||+.+|+++..++++++++ + +|+|++|+|++ +.++++.|..||+|++|+||||+++|+.|++.+
T Consensus 141 AL~aGN~vvlKps~~~~~~~~~l~~~~~~a---ag~P~g~~~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a 217 (455)
T cd07120 141 ALAAGCTVVVKPAGQTAQINAAIIRILAEI---PSLPAGVVNLFTESGSEGAAHLVASPDVDVISFTGSTATGRAIMAAA 217 (455)
T ss_pred HHHcCCEEEeECCCCChHHHHHHHHHHHHh---cCCCccceEEEecCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHH
Confidence 999999999999999999999999999863 4 99999999996 566788888999999999999999999998876
Q ss_pred ---CCCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccChhhHHHHHHHHHHcCc------
Q 005041 504 ---KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------ 573 (717)
Q Consensus 504 ---~~p~~lElGGk~p~iV~~dADl~~A~~~i~~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~------ 573 (717)
.||+++|||||||+||++|||+|.|++.+++++|.|+| +|++++|||||+++| |+|+++|+++++++.+
T Consensus 218 a~~~~~~~lElGG~~~~IV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-~~f~~~l~~~~~~l~~G~p~~~ 296 (455)
T cd07120 218 APTLKRLGLELGGKTPCIVFDDADLDAALPKLERALTIFAGQFCMAGSRVLVQRSIA-DEVRDRLAARLAAVKVGPGLDP 296 (455)
T ss_pred HhcCCeEEEECCCCCeeEECCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEEcHHHH-HHHHHHHHHHHHhcCcCCCCCC
Confidence 38999999999999999999999999999999999987 999999999999999 8999999999887631
Q ss_pred ----------------------------eE-ecCcc-c----cc-cc-c-C-----CCCccccccccCceEEEEEeCCHH
Q 005041 574 ----------------------------GL-FGGPR-A----SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVR 611 (717)
Q Consensus 574 ----------------------------~~-~g~~~-~----~~-~~-p-i-----~~~~~~~eE~FGPVl~v~~~~~~d 611 (717)
++ .|+.+ . .+ ++ | | ++|++++||+||||++|++|+|+|
T Consensus 297 ~~~~gpli~~~~~~~~~~~i~~a~~~ga~~~~~g~~~~~~~~~g~~~~Ptvl~~~~~d~~i~~~E~FgPvl~v~~~~~~d 376 (455)
T cd07120 297 ASDMGPLIDRANVDRVDRMVERAIAAGAEVVLRGGPVTEGLAKGAFLRPTLLEVDDPDADIVQEEIFGPVLTLETFDDEA 376 (455)
T ss_pred CCCcCCccCHHHHHHHHHHHHHHHHCCCEEEeCCccCcccCCCCceECCEEEecCCCCChhhhCcCcCceEEEeecCCHH
Confidence 12 22321 1 12 33 6 2 358899999999999999999999
Q ss_pred HHHHHHHhcCCCceeEEEecCHHHHHHHHhcCCeeeEEEcCCCCCCCCCccCCccccccccCcccccccchhhcccEEEE
Q 005041 612 AAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRW 691 (717)
Q Consensus 612 eAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~ 691 (717)
|||+++|+++|||++||||+|.++++++++++++|.|+||++....+..||||.++||+| +++|++|+++||+.|+
T Consensus 377 eai~~~n~~~~gLs~~ift~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G----~~~g~~~l~~ft~~k~ 452 (455)
T cd07120 377 EAVALANDTDYGLAASVWTRDLARAMRVARAIRAGTVWINDWNKLFAEAEEGGYRQSGLG----RLHGVAALEDFIEYKH 452 (455)
T ss_pred HHHHHHhCCCCCceEEEEcCCHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCccccccC----ccchHHHHHHHhceeE
Confidence 999999999999999999999999999999999999999998777778899999999986 2469999999999999
Q ss_pred EEe
Q 005041 692 ILR 694 (717)
Q Consensus 692 v~~ 694 (717)
|++
T Consensus 453 v~~ 455 (455)
T cd07120 453 IYL 455 (455)
T ss_pred EeC
Confidence 863
No 50
>cd07101 ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like. Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s).
Probab=100.00 E-value=1.4e-72 Score=632.49 Aligned_cols=395 Identities=17% Similarity=0.177 Sum_probs=329.1
Q ss_pred HHhcCCcceEEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhhc
Q 005041 271 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAG 350 (717)
Q Consensus 271 ~~~tg~~iGT~i~a~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~g 350 (717)
+|++|+.++++..++ .+|+++++++|++||+.|+++|.++|.++|++++++|++|+++|++++++|++++..
T Consensus 2 ~P~tg~~i~~~~~~~------~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~-- 73 (454)
T cd07101 2 APFTGEPLGELPQST------PADVEAAFARARAAQRAWAARPFAERAAVFLRFHDLVLERRDELLDLIQLETGKARR-- 73 (454)
T ss_pred cCCCCCEEEEEcCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHH--
Confidence 578999999988888 899999999999999999999999999999999999999999999999988876542
Q ss_pred hhHHHHHHhhcChhHHHHHHHHHHHHhccccc-ccccccccccCCCceEEEeecceeEEEEEcCC-Cch-hHHHHHHHHH
Q 005041 351 YAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAI 427 (717)
Q Consensus 351 ~~~a~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~AL 427 (717)
++. .|+...+..+++++...+. .+........+.....+.+++|+|||++|+|| ||. ++++++++||
T Consensus 74 --~a~--------~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~AL 143 (454)
T cd07101 74 --HAF--------EEVLDVAIVARYYARRAERLLKPRRRRGAIPVLTRTTVNRRPKGVVGVISPWNYPLTLAVSDAIPAL 143 (454)
T ss_pred --HHH--------HHHHHHHHHHHHHHHHHHHHhCCccccccCCCCceEEEEEEeccEEEEECCCccHHHHHHHHHHHHH
Confidence 221 1333344444444322211 11110000001123567889999999999998 685 6789999999
Q ss_pred HhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHhhcC-
Q 005041 428 RSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK- 504 (717)
Q Consensus 428 aaGN~vVlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a~- 504 (717)
++||+||+|||+.||+|+.++++++.+ + ||+|++|+|+| +.++++.|..| +|+|+||||+++|+.|++.++
T Consensus 144 aaGN~vvlKps~~~p~~~~~l~~~~~~----aglP~gv~~~v~g~~~~~~~~l~~~--~~~V~fTGs~~~g~~i~~~aa~ 217 (454)
T cd07101 144 LAGNAVVLKPDSQTALTALWAVELLIE----AGLPRDLWQVVTGPGSEVGGAIVDN--ADYVMFTGSTATGRVVAERAGR 217 (454)
T ss_pred HcCCEEEEECCccchHHHHHHHHHHHH----cCcCCCcEEEEeCCcHHHHHHHHhC--CCEEEEECCHHHHHHHHHHHHh
Confidence 999999999999999999999999987 7 99999999996 55677877776 689999999999999998773
Q ss_pred --CCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccChhhHHHHHHHHHHcCc--------
Q 005041 505 --IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV-------- 573 (717)
Q Consensus 505 --~p~~lElGGk~p~iV~~dADl~~A~~~i~~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~-------- 573 (717)
+|+++|||||||+||++|||+|.|++.+++|+|.|+| .|+|++|||||+++| |+|+++|+++++++.+
T Consensus 218 ~~~~~~lElgG~~p~iV~~dAdl~~a~~~i~~~~~~~sGQ~C~a~~rv~V~~~i~-d~f~~~L~~~~~~~~~G~~~~~~~ 296 (454)
T cd07101 218 RLIGCSLELGGKNPMIVLEDADLDKAAAGAVRACFSNAGQLCVSIERIYVHESVY-DEFVRRFVARTRALRLGAALDYGP 296 (454)
T ss_pred cCCcEEEECCCCceEEECCCCCHHHHHHHHHHHHHhcCCCCcccCeEEEEcHHHH-HHHHHHHHHHHhhCCCCCCCCCCC
Confidence 8999999999999999999999999999999999976 999999999999999 8999999999887531
Q ss_pred --------------------------eE-ecCccc---cc-cc-c-C-----CCCccccccccCceEEEEEeCCHHHHHH
Q 005041 574 --------------------------GL-FGGPRA---SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAID 615 (717)
Q Consensus 574 --------------------------~~-~g~~~~---~~-~~-p-i-----~~~~~~~eE~FGPVl~v~~~~~~deAi~ 615 (717)
++ .|+... .+ |+ | | ++|++++||+||||++|++|+|+||||+
T Consensus 297 ~~gpli~~~~~~~v~~~v~~a~~~Ga~vl~gg~~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~ 376 (454)
T cd07101 297 DMGSLISQAQLDRVTAHVDDAVAKGATVLAGGRARPDLGPYFYEPTVLTGVTEDMELFAEETFGPVVSIYRVADDDEAIE 376 (454)
T ss_pred CcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCeEEcCEEEeCCCCCCHHHhCCCCCceEEEEeeCCHHHHHH
Confidence 12 233211 12 33 5 2 3588999999999999999999999999
Q ss_pred HHHhcCCCceeEEEecCHHHHHHHHhcCCeeeEEEcCCCCC---CCCCccCCccccccccCcccccccchhhcccEEEEE
Q 005041 616 HIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRF---CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWI 692 (717)
Q Consensus 616 ~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~v~iN~~~~~---~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v 692 (717)
++|+++|||++||||+|.+++.++++++++|+|+||++... .+.+||||.+.||+| +++|++|+++||+.|++
T Consensus 377 ~~n~~~~gL~~~i~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~~~PfgG~k~SG~G----~~~g~~~~~~~~~~k~v 452 (454)
T cd07101 377 LANDTDYGLNASVWTRDGARGRRIAARLRAGTVNVNEGYAAAWASIDAPMGGMKDSGLG----RRHGAEGLLKYTETQTV 452 (454)
T ss_pred HHhCCCCCceEEEEcCCHHHHHHHHHhcCcceEEECCCCCcCcCCCCCCCCcccccccC----ccchHHHHHHhcceEEE
Confidence 99999999999999999999999999999999999986542 356899999999986 34699999999999998
Q ss_pred Ee
Q 005041 693 LR 694 (717)
Q Consensus 693 ~~ 694 (717)
.+
T Consensus 453 ~~ 454 (454)
T cd07101 453 AV 454 (454)
T ss_pred eC
Confidence 63
No 51
>cd07115 ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like. 4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD.
Probab=100.00 E-value=1.7e-72 Score=632.13 Aligned_cols=396 Identities=18% Similarity=0.200 Sum_probs=339.2
Q ss_pred HHhcCCcceEEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhhc
Q 005041 271 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAG 350 (717)
Q Consensus 271 ~~~tg~~iGT~i~a~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~g 350 (717)
+|.+++.++++...+ .+++++++++|++||+.|+++|.++|.++|++++++|++|+++|++++++|+|++..
T Consensus 3 ~P~t~~~i~~~~~~~------~~~v~~av~~a~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~la~~~~~e~Gk~~~-- 74 (453)
T cd07115 3 NPATGELIARVAQAS------AEDVDAAVAAARAAFEAWSAMDPAERGRILWRLAELILANADELARLESLDTGKPIR-- 74 (453)
T ss_pred CCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH--
Confidence 578899999988888 899999999999999999999999999999999999999999999999888765432
Q ss_pred hhHHHHHHhhcChhHHHHHHHHHHHHhccccc-ccccccccccCCCceEEEeecceeEEEEEcCC-Cch-hHHHHHHHHH
Q 005041 351 YAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAI 427 (717)
Q Consensus 351 ~~~a~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~AL 427 (717)
++. ..|+..+++.+++++...+. .+...+. ..+...+++++|+|||++|+|| ||. +.++++++||
T Consensus 75 --~~~-------~~ev~~~i~~l~~~~~~~~~~~g~~~~~---~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~AL 142 (453)
T cd07115 75 --AAR-------RLDVPRAADTFRYYAGWADKIEGEVIPV---RGPFLNYTVREPVGVVGAIVPWNFPLMFAAWKVAPAL 142 (453)
T ss_pred --HHH-------HHHHHHHHHHHHHHHHHHHHhcCceecC---CCCceEEEEecceeEEEEEcCCCCHHHHHHHHHHHHH
Confidence 221 12455666666666544322 2322221 1344567899999999999998 785 5679999999
Q ss_pred HhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHhhc--
Q 005041 428 RSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST-- 503 (717)
Q Consensus 428 aaGN~vVlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a-- 503 (717)
++||+||+|||+.||+|+..+++++.+ + ||+|++|+|++ +.++++.|..||++|+|+||||+.+|+.|++.+
T Consensus 143 aaGN~Vi~Kps~~~p~~~~~l~~~~~~----aGlP~~~~~~v~g~~~~~~~~l~~~~~id~v~fTGs~~~g~~v~~~aa~ 218 (453)
T cd07115 143 AAGNTVVLKPAELTPLSALRIAELMAE----AGFPAGVLNVVTGFGEVAGAALVEHPDVDKITFTGSTAVGRKIMQGAAG 218 (453)
T ss_pred hcCCEEEEECCCCCcHHHHHHHHHHHh----cCcCchheEEEecCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhh
Confidence 999999999999999999999999987 7 99999999996 556788888899999999999999999999876
Q ss_pred -CCCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccChhhHHHHHHHHHHcC---------
Q 005041 504 -KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEG--------- 572 (717)
Q Consensus 504 -~~p~~lElGGk~p~iV~~dADl~~A~~~i~~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~--------- 572 (717)
.||+++|||||||+||++|||+|.|++.+++++|.|+| .|+|++|||||+++| |+|+++|+++++++.
T Consensus 219 ~~~~~~lElgG~~p~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~-~~f~~~l~~~~~~~~~g~p~~~~~ 297 (453)
T cd07115 219 NLKRVSLELGGKSANIVFADADLDAAVRAAATGIFYNQGQMCTAGSRLLVHESIY-DEFLERFTSLARSLRPGDPLDPKT 297 (453)
T ss_pred cCCeEEEecCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCCCCeEEEEcHHHH-HHHHHHHHHHHhcCCcCCCCCCCC
Confidence 38999999999999999999999999999999999986 999999999999999 899999999887652
Q ss_pred -------------------------ceEe-cCccc--cc-cc-c-C-----CCCccccccccCceEEEEEeCCHHHHHHH
Q 005041 573 -------------------------VGLF-GGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDH 616 (717)
Q Consensus 573 -------------------------~~~~-g~~~~--~~-~~-p-i-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~ 616 (717)
.++. |+... .+ ++ | | +++++++||+||||++|++|+|+||||++
T Consensus 298 ~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~ 377 (453)
T cd07115 298 QMGPLVSQAQFDRVLDYVDVGREEGARLLTGGKRPGARGFFVEPTIFAAVPPEMRIAQEEIFGPVVSVMRFRDEEEALRI 377 (453)
T ss_pred CCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCceECCEEEecCCCCChHhhCCCcCceEEEEeeCCHHHHHHH
Confidence 2222 44322 23 33 5 2 35889999999999999999999999999
Q ss_pred HHhcCCCceeEEEecCHHHHHHHHhcCCeeeEEEcCCCCCCCCCccCCccccccccCcccccccchhhcccEEEEEEec
Q 005041 617 IHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRG 695 (717)
Q Consensus 617 aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v~~~ 695 (717)
+|+++|||++||||+|.+++.++++++++|+|+||++....+.+||||.+.||+|. ++|.+|+++|++.|+++++
T Consensus 378 ~n~~~~gL~~~ifs~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~G~----~~g~~~~~~f~~~k~~~~~ 452 (453)
T cd07115 378 ANGTEYGLAAGVWTRDLGRAHRVAAALKAGTVWINTYNRFDPGSPFGGYKQSGFGR----EMGREALDEYTEVKSVWVN 452 (453)
T ss_pred HhCCCCCCeEEEECCCHHHHHHHHHhcCccEEEECCCCCCCCCCCCCCcccccCCc----CchHHHHHHhhceEEEEEe
Confidence 99999999999999999999999999999999999877777789999999999862 4689999999999999763
No 52
>cd07109 ALDH_AAS00426 Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like. Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD.
Probab=100.00 E-value=1.6e-72 Score=632.44 Aligned_cols=393 Identities=19% Similarity=0.207 Sum_probs=337.3
Q ss_pred HHhcCCcceEEEecCCcccccHhhHHHHHHHHHHHHHHHh-cCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhh
Q 005041 271 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQ-ALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 349 (717)
Q Consensus 271 ~~~tg~~iGT~i~a~~~~~~~~~~v~~av~~A~~A~~~w~-~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~ 349 (717)
+|++|+.++++..++ .+|+++++++|++||+.|. ++|.++|.++|++++++|++|+++|++++++|++++..
T Consensus 3 ~P~tg~~i~~~~~~~------~~dv~~av~~a~~A~~~~~~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~- 75 (454)
T cd07109 3 DPSTGEVFARIARGG------AADVDRAVQAARRAFESGWLRLSPAERGRLLLRIARLIREHADELARLESLDTGKPLT- 75 (454)
T ss_pred CCCCCCEEEEEcCCC------HHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHH-
Confidence 578999999998888 8999999999999999876 99999999999999999999999999999888765432
Q ss_pred chhHHHHHHhhcChhHHHHHHHHHHHHhccccc-ccccccccccCCCceEEEeecceeEEEEEcCC-Cch-hHHHHHHHH
Q 005041 350 GYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 426 (717)
Q Consensus 350 g~~~a~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~A 426 (717)
++ ..|+..+++.++++++..+. .+...+. ..+...+++++|+|||++|+|| ||. +.++++++|
T Consensus 76 ---~a--------~~ev~~~~~~l~~~~~~~~~~~g~~~~~---~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~A 141 (454)
T cd07109 76 ---QA--------RADVEAAARYFEYYGGAADKLHGETIPL---GPGYFVYTVREPHGVTGHIIPWNYPLQITGRSVAPA 141 (454)
T ss_pred ---HH--------HHHHHHHHHHHHHHHHHHHHhcCccccc---CCCceEEEEEeeeeEEEEECCCchHHHHHHHHHHHH
Confidence 22 23566667777776644332 2222221 1344567899999999999998 785 677999999
Q ss_pred HHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHhhc-
Q 005041 427 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST- 503 (717)
Q Consensus 427 LaaGN~vVlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a- 503 (717)
|++||+||+|||+.||+|+..+++++.+ + ||+|++|+|++ +.+.++.|..||++|+|+||||+++|+.|++.+
T Consensus 142 LaaGN~VvlKps~~~p~~~~~l~~~~~~----aGlP~gv~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa 217 (454)
T cd07109 142 LAAGNAVVVKPAEDAPLTALRLAELAEE----AGLPAGALNVVTGLGAEAGAALVAHPGVDHISFTGSVETGIAVMRAAA 217 (454)
T ss_pred HHcCCEEEEECCCCChHHHHHHHHHHHH----cCcCccceEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHh
Confidence 9999999999999999999999999987 7 99999999996 556777788899999999999999999999876
Q ss_pred --CCCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccChhhHHHHHHHHHHcCc-------
Q 005041 504 --KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------- 573 (717)
Q Consensus 504 --~~p~~lElGGk~p~iV~~dADl~~A~~~i~~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~------- 573 (717)
.||+++|||||||+||++|||+|.|++.+++|+|.|+| .|+|++|||||+++| |+|+++|+++++++.+
T Consensus 218 ~~~~p~~lElgG~~~~iV~~daDl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-~~f~~~l~~~~~~~~~G~p~~~~ 296 (454)
T cd07109 218 ENVVPVTLELGGKSPQIVFADADLEAALPVVVNAIIQNAGQTCSAGSRLLVHRSIY-DEVLERLVERFRALRVGPGLEDP 296 (454)
T ss_pred hcCCcEEEECCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCccCcEEEEcHHHH-HHHHHHHHHHHHhCCCCCCcccC
Confidence 48999999999999999999999999999999999987 999999999999999 8999999999887532
Q ss_pred --------------------------eEe-cCccc-----cc-cc-c-C-----CCCccccccccCceEEEEEeCCHHHH
Q 005041 574 --------------------------GLF-GGPRA-----SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAA 613 (717)
Q Consensus 574 --------------------------~~~-g~~~~-----~~-~~-p-i-----~~~~~~~eE~FGPVl~v~~~~~~deA 613 (717)
+++ |+... .+ ++ | | ++|++++||+||||++|++|+|+|||
T Consensus 297 ~~gpli~~~~~~~~~~~i~~a~~~ga~~l~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~deA 376 (454)
T cd07109 297 DLGPLISAKQLDRVEGFVARARARGARIVAGGRIAEGAPAGGYFVAPTLLDDVPPDSRLAQEEIFGPVLAVMPFDDEAEA 376 (454)
T ss_pred cCCCccCHHHHHHHHHHHHHHHhCCCEEEeCCCcCcccCCCCcEECcEEEecCCCCChhhhCCCCCceEEEEecCCHHHH
Confidence 222 33221 13 33 5 2 35899999999999999999999999
Q ss_pred HHHHHhcCCCceeEEEecCHHHHHHHHhcCCeeeEEEcCCC-CCCCCCccCCccccccccCcccccccchhhcccEEEEE
Q 005041 614 IDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNAST-RFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWI 692 (717)
Q Consensus 614 i~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~v~iN~~~-~~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v 692 (717)
|+++|+++|||++||||+|.+++.++++++++|+|+||+.. ......||||.|.||+| +++|.+|+++||+.|+|
T Consensus 377 i~~~n~~~~gL~~~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~k~SG~G----~~~g~~~~~~f~~~k~i 452 (454)
T cd07109 377 IALANGTDYGLVAGVWTRDGDRALRVARRLRAGQVFVNNYGAGGGIELPFGGVKKSGHG----REKGLEALYNYTQTKTV 452 (454)
T ss_pred HHHhhCCCCCceEEEECCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCCcCCcccCcCC----ccchHHHHHHHhceeEE
Confidence 99999999999999999999999999999999999999976 44557899999999986 35689999999999988
Q ss_pred E
Q 005041 693 L 693 (717)
Q Consensus 693 ~ 693 (717)
.
T Consensus 453 ~ 453 (454)
T cd07109 453 A 453 (454)
T ss_pred e
Confidence 5
No 53
>cd07141 ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like. NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism.
Probab=100.00 E-value=1.7e-72 Score=635.55 Aligned_cols=396 Identities=17% Similarity=0.193 Sum_probs=337.9
Q ss_pred HHHhcCCcceEEEecCCcccccHhhHHHHHHHHHHHHH---HHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
Q 005041 270 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSR---RLQALQSQDRRKILLDVADALEANESLIKVENEADVAAA 346 (717)
Q Consensus 270 ~~~~tg~~iGT~i~a~~~~~~~~~~v~~av~~A~~A~~---~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~ 346 (717)
.+|++|+.++++..++ .+++++++++|++||+ .|+++|.++|.++|++++++|+++.++|++++.+|.+++
T Consensus 27 ~~P~tg~~i~~~~~~~------~~~v~~av~~A~~A~~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~ 100 (481)
T cd07141 27 INPATGEKICEVQEGD------KADVDKAVKAARAAFKLGSPWRTMDASERGRLLNKLADLIERDRAYLASLETLDNGKP 100 (481)
T ss_pred ECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHhhccCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCc
Confidence 5678999999988888 8999999999999998 699999999999999999999999999999888776554
Q ss_pred HhhchhHHHHHHhhcChhHHHHHHHHHHHHhccccc-ccccccccccCCCceEEEeecceeEEEEEcCC-Cch-hHHHHH
Q 005041 347 QEAGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIA 423 (717)
Q Consensus 347 ~~~g~~~a~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~ 423 (717)
.. ++. ..++..+++.+++++...+. .+...+. ..+...+.+++|+|||++|+|| ||. +.++++
T Consensus 101 ~~----~~~-------~~ev~~~~~~l~~~a~~~~~~~g~~~~~---~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~ 166 (481)
T cd07141 101 FS----KSY-------LVDLPGAIKVLRYYAGWADKIHGKTIPM---DGDFFTYTRHEPVGVCGQIIPWNFPLLMAAWKL 166 (481)
T ss_pred hH----HHH-------HHHHHHHHHHHHHHHHHHHHhcCceecC---CCCceEEEEEeceeEEEEEccChhHHHHHHHHH
Confidence 21 111 12566666677766654332 2322211 1223457889999999999998 796 458999
Q ss_pred HHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHh
Q 005041 424 SLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKE 501 (717)
Q Consensus 424 ~~ALaaGN~vVlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~ 501 (717)
++||++||+||+|||+.||+|+..+++++.+ + +|+|++|+|+| +.++++.|..||+||+|+||||+.+|+.|++
T Consensus 167 ~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~----aGlP~gvv~~v~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~~ 242 (481)
T cd07141 167 APALACGNTVVLKPAEQTPLTALYLASLIKE----AGFPPGVVNVVPGYGPTAGAAISSHPDIDKVAFTGSTEVGKLIQQ 242 (481)
T ss_pred HHHHHcCCEEEEeCCCCCcHHHHHHHHHHHH----cCcCccceEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHH
Confidence 9999999999999999999999999999986 7 99999999996 5567888889999999999999999999987
Q ss_pred hcC----CCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccChhhHHHHHHHHHHcCc---
Q 005041 502 STK----IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV--- 573 (717)
Q Consensus 502 ~a~----~p~~lElGGk~p~iV~~dADl~~A~~~i~~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~--- 573 (717)
.+. ||+++|||||||+||++|||++.|++.+++|+|.|+| .|+|++|||||+++| |+|+++|+++++++.+
T Consensus 243 ~aa~~~~~~~~lElGG~~~~iV~~dADl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~G~p 321 (481)
T cd07141 243 AAGKSNLKRVTLELGGKSPNIVFADADLDYAVEQAHEALFFNMGQCCCAGSRTFVQESIY-DEFVKRSVERAKKRVVGNP 321 (481)
T ss_pred HhhhhcCceEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCcccCCeEEEEcHHHH-HHHHHHHHHHHHhCCCCCC
Confidence 653 7999999999999999999999999999999999987 999999999999999 8999999998886532
Q ss_pred -------------------------------eE-ecCccc--cc-cc-c-C-----CCCccccccccCceEEEEEeCCHH
Q 005041 574 -------------------------------GL-FGGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVR 611 (717)
Q Consensus 574 -------------------------------~~-~g~~~~--~~-~~-p-i-----~~~~~~~eE~FGPVl~v~~~~~~d 611 (717)
++ +|+... .+ |+ | | +++++++||+||||++|++|+|+|
T Consensus 322 ~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~ 401 (481)
T cd07141 322 FDPKTEQGPQIDEEQFKKILELIESGKKEGAKLECGGKRHGDKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIFKFKTID 401 (481)
T ss_pred CCCCCCCcCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEeeEEEecCCCCChhhhccccCCeEEEEeeCCHH
Confidence 11 233321 23 33 5 2 358899999999999999999999
Q ss_pred HHHHHHHhcCCCceeEEEecCHHHHHHHHhcCCeeeEEEcCCCCCCCCCccCCccccccccCcccccccchhhcccEEEE
Q 005041 612 AAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRW 691 (717)
Q Consensus 612 eAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~ 691 (717)
|||+++|+++|||++||||+|.+++.++++++++|+|+||++....+.+||||.+.||+| +++|.+|+++||+.|+
T Consensus 402 eai~~~n~~~~gLs~~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G----~~~g~~~~~~ft~~k~ 477 (481)
T cd07141 402 EVIERANNTTYGLAAAVFTKDIDKAITFSNALRAGTVWVNCYNVVSPQAPFGGYKMSGNG----RELGEYGLQEYTEVKT 477 (481)
T ss_pred HHHHHHhCCCccceEEEECCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCCCCcccCcCC----ccchHHHHHHHhheEE
Confidence 999999999999999999999999999999999999999987766677899999999986 2468999999999999
Q ss_pred EEe
Q 005041 692 ILR 694 (717)
Q Consensus 692 v~~ 694 (717)
+++
T Consensus 478 v~~ 480 (481)
T cd07141 478 VTI 480 (481)
T ss_pred EEE
Confidence 875
No 54
>cd07089 ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins. The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD.
Probab=100.00 E-value=2.8e-72 Score=630.17 Aligned_cols=398 Identities=20% Similarity=0.212 Sum_probs=335.8
Q ss_pred HHhcCCcceEEEecCCcccccHhhHHHHHHHHHHHHHHHh-cCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhh
Q 005041 271 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQ-ALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 349 (717)
Q Consensus 271 ~~~tg~~iGT~i~a~~~~~~~~~~v~~av~~A~~A~~~w~-~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~ 349 (717)
+|.+++.++++..++ .+|+++++++|++||+.|+ ++|..+|.++|++++++|++|.++|+++++.|+|++..
T Consensus 3 ~P~tg~~i~~~~~~~------~~~v~~av~~A~~a~~~w~w~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~- 75 (459)
T cd07089 3 NPATEEVIGTAPDAG------AADVDAAIAAARRAFDTGDWSTDAEERARCLRQLHEALEARKEELRALLVAEVGAPVM- 75 (459)
T ss_pred CCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHhhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHH-
Confidence 578899999988888 8999999999999999999 99999999999999999999999999999888766531
Q ss_pred chhHHHHHHhhcChhHHHHHHHHHHHHhcccccc-ccc-ccccc-cCCCceEEEeecceeEEEEEcCC-Cch-hHHHHHH
Q 005041 350 GYAKSLVSRLALKPGKISSLAKSIRILADMEEPI-GQI-LKRTE-LADGLILEKTSCPLGVLLIVFES-RPD-ALVQIAS 424 (717)
Q Consensus 350 g~~~a~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~-~~~~~-~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~ 424 (717)
++.. .|+...++.++++++..+.. +.. .+... ...+...+++|+|+|||++|+|| ||. +.+++++
T Consensus 76 ---~~~~-------~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P~N~P~~~~~~~~~ 145 (459)
T cd07089 76 ---TARA-------MQVDGPIGHLRYFADLADSFPWEFDLPVPALRGGPGRRVVRREPVGVVAAITPWNFPFFLNLAKLA 145 (459)
T ss_pred ---HHHH-------HHHHHHHHHHHHHHHHHHHhcCceecCcccccCCCceeEEEEeeccEEEEEcCCchHHHHHHHHHH
Confidence 1111 24444555555544332211 111 11100 01234567899999999999998 685 5679999
Q ss_pred HHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHhh
Q 005041 425 LAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKES 502 (717)
Q Consensus 425 ~ALaaGN~vVlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~ 502 (717)
+||++||+||+|||+.+|+++..+++++.+ + +|+|++|+|+| +++++..|..||++++|+||||+.+|+.|++.
T Consensus 146 ~AL~aGN~vvlKps~~~p~~~~~l~~~~~~----aglP~g~~~~v~g~~~~~~~~l~~~~~~~~v~ftGs~~~g~~v~~~ 221 (459)
T cd07089 146 PALAAGNTVVLKPAPDTPLSALLLGEIIAE----TDLPAGVVNVVTGSDNAVGEALTTDPRVDMVSFTGSTAVGRRIMAQ 221 (459)
T ss_pred HHHHcCCEEEEECCCCChHHHHHHHHHHHH----cCCCccceEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHH
Confidence 999999999999999999999999999987 7 99999999996 55578888899999999999999999999987
Q ss_pred c---CCCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccChhhHHHHHHHHHHcCc-----
Q 005041 503 T---KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV----- 573 (717)
Q Consensus 503 a---~~p~~lElGGk~p~iV~~dADl~~A~~~i~~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~----- 573 (717)
+ .||+++|||||||+||++|||+|.|++.+++++|.|+| .|+|++|||||+++| |+|+++|+++++++.+
T Consensus 222 aa~~~~~~~lelgG~n~~iV~~dadl~~aa~~i~~~~~~~sGQ~C~a~~~v~V~~~v~-~~f~~~l~~~~~~~~~g~p~~ 300 (459)
T cd07089 222 AAATLKRVLLELGGKSANIVLDDADLAAAAPAAVGVCMHNAGQGCALTTRLLVPRSRY-DEVVEALAAAFEALPVGDPAD 300 (459)
T ss_pred HHhcCCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHHHhcCCcccCCeEEEEcHHHH-HHHHHHHHHHHHhCCCCCCCC
Confidence 7 38999999999999999999999999999999999976 999999999999999 8999999999887631
Q ss_pred -----------------------------eE-ecCccc----cc-cc-c-C-----CCCccccccccCceEEEEEeCCHH
Q 005041 574 -----------------------------GL-FGGPRA----SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVR 611 (717)
Q Consensus 574 -----------------------------~~-~g~~~~----~~-~~-p-i-----~~~~~~~eE~FGPVl~v~~~~~~d 611 (717)
++ .|+... .+ ++ | | ++|++++||+||||++|++|+|+|
T Consensus 301 ~~~~~gp~i~~~~~~~v~~~i~~a~~~Ga~~l~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~d 380 (459)
T cd07089 301 PGTVMGPLISAAQRDRVEGYIARGRDEGARLVTGGGRPAGLDKGFYVEPTLFADVDNDMRIAQEEIFGPVLVVIPYDDDD 380 (459)
T ss_pred CCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCeEECCEEEEcCCCCCHHHhCCCcCceEEEeccCCHH
Confidence 11 233221 23 33 5 2 358899999999999999999999
Q ss_pred HHHHHHHhcCCCceeEEEecCHHHHHHHHhcCCeeeEEEcCCCCCCCCCccCCccccccccCcccccccchhhcccEEEE
Q 005041 612 AAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRW 691 (717)
Q Consensus 612 eAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~ 691 (717)
|||+++|+++|||++||||+|.+++.++++++++|.|+||++....+..||||.+.||+|. ++|++|+++||+.|+
T Consensus 381 eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~~~~G~v~iN~~~~~~~~~PfgG~k~SG~G~----~~g~~~l~~ft~~k~ 456 (459)
T cd07089 381 EAVRIANDSDYGLSGGVWSADVDRAYRVARRIRTGSVGINGGGGYGPDAPFGGYKQSGLGR----ENGIEGLEEFLETKS 456 (459)
T ss_pred HHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCcCCcccccCCC----CchHHHHHHhhceeE
Confidence 9999999999999999999999999999999999999999987666778999999999862 469999999999999
Q ss_pred EEe
Q 005041 692 ILR 694 (717)
Q Consensus 692 v~~ 694 (717)
|.+
T Consensus 457 v~~ 459 (459)
T cd07089 457 IAY 459 (459)
T ss_pred EeC
Confidence 864
No 55
>cd07150 ALDH_VaniDH_like Pseudomonas putida vanillin dehydrogenase-like. Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde.
Probab=100.00 E-value=2.7e-72 Score=630.73 Aligned_cols=396 Identities=19% Similarity=0.207 Sum_probs=336.2
Q ss_pred HHHhcCCcceEEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhh
Q 005041 270 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 349 (717)
Q Consensus 270 ~~~~tg~~iGT~i~a~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~ 349 (717)
.+|.+|+.++++..++ .+|+++++++|++||+.|+++|.++|.++|++++++|+++.++|+++++.|+|++..
T Consensus 4 ~~P~tg~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~- 76 (451)
T cd07150 4 LNPADGSVYARVAVGS------RQDAERAIAAAYDAFPAWAATTPSERERILLKAAEIMERRADDLIDLLIDEGGSTYG- 76 (451)
T ss_pred cCCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHH-
Confidence 4678999999998888 899999999999999999999999999999999999999999999999887765432
Q ss_pred chhHHHHHHhhcChhHHHHHHHHHHHHhccccc-ccccccccccCCCceEEEeecceeEEEEEcCC-Cch-hHHHHHHHH
Q 005041 350 GYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 426 (717)
Q Consensus 350 g~~~a~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~A 426 (717)
++ ..|+...++.+++++...+. .+...+. ...+...+.+++|+|||++|+|| ||. +.++++++|
T Consensus 77 ---~a--------~~ev~~~~~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~A 143 (451)
T cd07150 77 ---KA--------WFETTFTPELLRAAAGECRRVRGETLPS--DSPGTVSMSVRRPLGVVAGITPFNYPLILATKKVAFA 143 (451)
T ss_pred ---HH--------HHHHHHHHHHHHHHHHHHHHhcCccccC--CCCCceeEEEEecccEEEEECCCccHHHHHHHHHHHH
Confidence 22 12455555566655543322 2222221 11244567889999999999998 786 567999999
Q ss_pred HHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHhhc-
Q 005041 427 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST- 503 (717)
Q Consensus 427 LaaGN~vVlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a- 503 (717)
|++||+||+|||+.+|+|+..+++++.+ + +|+|++|+|++ +.++++.|..||+||+|+||||+++|+.|++.+
T Consensus 144 LaaGN~VilKps~~~p~t~~~l~~~~~~----ag~P~g~v~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa 219 (451)
T cd07150 144 LAAGNTVVLKPSEETPVIGLKIAEIMEE----AGLPKGVFNVVTGGGAEVGDELVDDPRVRMVTFTGSTAVGREIAEKAG 219 (451)
T ss_pred HhcCCeEEEECCccCcHHHHHHHHHHHH----hCCCcCcEEEeeCCCcHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHh
Confidence 9999999999999999999999999986 7 99999999996 567888888999999999999999999998776
Q ss_pred --CCCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccChhhHHHHHHHHHHcCc-------
Q 005041 504 --KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------- 573 (717)
Q Consensus 504 --~~p~~lElGGk~p~iV~~dADl~~A~~~i~~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~------- 573 (717)
.+|+++|||||||+||++|||+|.|++.+++++|.|+| .|++++|+|||+++| |+|+++|+++++++.+
T Consensus 220 ~~~~~~~lelGG~~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-~~f~~~l~~~~~~~~~g~p~~~~ 298 (451)
T cd07150 220 RHLKKITLELGGKNPLIVLADADLDYAVRAAAFGAFMHQGQICMSASRIIVEEPVY-DEFVKKFVARASKLKVGDPRDPD 298 (451)
T ss_pred hcCCceEeecCCCCeeEECCCCChHHHHHHHHHHHHhhcCCCCCCCeeEEEcHHHH-HHHHHHHHHHHHhcCCCCCCCCC
Confidence 38999999999999999999999999999999999987 999999999999999 8999999999987632
Q ss_pred ---------------------------eE-ecCccccccc-c-C-----CCCccccccccCceEEEEEeCCHHHHHHHHH
Q 005041 574 ---------------------------GL-FGGPRASKLL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIH 618 (717)
Q Consensus 574 ---------------------------~~-~g~~~~~~~~-p-i-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN 618 (717)
++ .|+.....++ | | ++|++++||+||||++|++|+|+||||+++|
T Consensus 299 ~~~gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n 378 (451)
T cd07150 299 TVIGPLISPRQVERIKRQVEDAVAKGAKLLTGGKYDGNFYQPTVLTDVTPDMRIFREETFGPVTSVIPAKDAEEALELAN 378 (451)
T ss_pred CCCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccCCcEEcCEEEeCCCCCCHHHhCCCcCceEEEEEeCCHHHHHHHHh
Confidence 11 1221111123 5 2 3578999999999999999999999999999
Q ss_pred hcCCCceeEEEecCHHHHHHHHhcCCeeeEEEcCCCCCC-CCCccCCccccccccCcccccccchhhcccEEEEEEe
Q 005041 619 QHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFC-DGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILR 694 (717)
Q Consensus 619 ~~~~GL~a~I~t~d~~~a~~~~~~l~~G~v~iN~~~~~~-~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v~~ 694 (717)
+++|||++||||+|.++++++++++++|.|+||+++... +..||||.+.||+| +++|++|+++||+.|+|.+
T Consensus 379 ~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~pfgG~~~SG~G----~~~g~~~l~~~~~~k~v~~ 451 (451)
T cd07150 379 DTEYGLSAAILTNDLQRAFKLAERLESGMVHINDPTILDEAHVPFGGVKASGFG----REGGEWSMEEFTELKWITV 451 (451)
T ss_pred CCCCCCeEEEEeCCHHHHHHHHHhcCcCEEEECCCCCCCCCCCCcCCccccccC----cCCcHHHHHHhheeeEEeC
Confidence 999999999999999999999999999999999987543 56899999999986 3469999999999999863
No 56
>cd07094 ALDH_F21_LactADH-like ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins. ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences.
Probab=100.00 E-value=4.2e-72 Score=629.19 Aligned_cols=398 Identities=21% Similarity=0.273 Sum_probs=336.3
Q ss_pred HHHhcCCcceEEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhh
Q 005041 270 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 349 (717)
Q Consensus 270 ~~~~tg~~iGT~i~a~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~ 349 (717)
.+|++|+.++++..++ .+|+++++++|++||+.|+++|..+|.++|++++++|++|.++|++++.+|+|++..
T Consensus 4 ~~P~t~~~~~~~~~~~------~~~v~~av~~a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~- 76 (453)
T cd07094 4 HNPYDGEVIGKVPADD------RADAEEALATARAGAENRRALPPHERMAILERAADLLKKRAEEFAKIIACEGGKPIK- 76 (453)
T ss_pred cCCCCCCEEEEEcCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH-
Confidence 4688999999988888 899999999999999999999999999999999999999999999999888765532
Q ss_pred chhHHHHHHhhcChhHHHHHHHHHHHHhccccc-cccccccc--ccCCCceEEEeecceeEEEEEcCC-Cch-hHHHHHH
Q 005041 350 GYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRT--ELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIAS 424 (717)
Q Consensus 350 g~~~a~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~ 424 (717)
++ ..++..+++.+++++...+. .+...+.. ....+...+++++|+|||++|+|| +|. +.+++++
T Consensus 77 ---~a--------~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~ 145 (453)
T cd07094 77 ---DA--------RVEVDRAIDTLRLAAEEAERIRGEEIPLDATQGSDNRLAWTIREPVGVVLAITPFNFPLNLVAHKLA 145 (453)
T ss_pred ---HH--------HHHHHHHHHHHHHHHHHHHHhcCccccccccccCCCceEEEEEeccceEEEECCCccHHHHHHHHHH
Confidence 21 12444555555554432211 12111110 011244567889999999999998 685 5679999
Q ss_pred HHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHhh
Q 005041 425 LAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKES 502 (717)
Q Consensus 425 ~ALaaGN~vVlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~ 502 (717)
+||++||+||+|||+.+|+++..+++++.+ + +|+|+||+|+| ++++++.|..||++|+|+||||+++|+.|++.
T Consensus 146 ~AL~aGN~VI~Kps~~~p~~~~~l~~~l~~----ag~P~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~v~~~ 221 (453)
T cd07094 146 PAIATGCPVVLKPASKTPLSALELAKILVE----AGVPEGVLQVVTGEREVLGDAFAADERVAMLSFTGSAAVGEALRAN 221 (453)
T ss_pred HHHHcCCEEEEECCCcchHHHHHHHHHHHH----cCCCcCcEEEEeCCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHH
Confidence 999999999999999999999999999997 7 99999999995 56668888899999999999999999999988
Q ss_pred c-CCCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccChhhHHHHHHHHHHcCc-------
Q 005041 503 T-KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------- 573 (717)
Q Consensus 503 a-~~p~~lElGGk~p~iV~~dADl~~A~~~i~~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~------- 573 (717)
+ .+|+++|||||||+||++|||+|.|++.+++++|.|+| .|+|++|||||+++| |+|+++|+++++++.+
T Consensus 222 a~~~~~~lelGGk~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~i~V~~~i~-d~f~~~L~~~~~~~~~g~p~~~~ 300 (453)
T cd07094 222 AGGKRIALELGGNAPVIVDRDADLDAAIEALAKGGFYHAGQVCISVQRIYVHEELY-DEFIEAFVAAVKKLKVGDPLDED 300 (453)
T ss_pred cCCCceEEecCCCCceEECCCCCHHHHHHHHHHHHHHhcCCCCcCCeEEEEeHHHH-HHHHHHHHHHHHhccCCCCCCCC
Confidence 7 48999999999999999999999999999999999987 999999999999999 8999999999887532
Q ss_pred ---------------------------eE-ecCccccccc-c-C-----CCCccccccccCceEEEEEeCCHHHHHHHHH
Q 005041 574 ---------------------------GL-FGGPRASKLL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIH 618 (717)
Q Consensus 574 ---------------------------~~-~g~~~~~~~~-p-i-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN 618 (717)
++ .|+.....++ | | ++|++++||+||||++|++|+|+||||+++|
T Consensus 301 ~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~g~~~~Ptvl~~~~~~~~i~~~E~FgPvl~v~~~~~~~eai~~~n 380 (453)
T cd07094 301 TDVGPLISEEAAERVERWVEEAVEAGARLLCGGERDGALFKPTVLEDVPRDTKLSTEETFGPVVPIIRYDDFEEAIRIAN 380 (453)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCccCCCeEEeCEEEeCCCCCChhhhCCCcCceEEEEEeCCHHHHHHHHh
Confidence 11 1222212233 5 2 3689999999999999999999999999999
Q ss_pred hcCCCceeEEEecCHHHHHHHHhcCCeeeEEEcCCCCC-CCCCccCCccccccccCcccccccchhhcccEEEEEEe
Q 005041 619 QHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRF-CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILR 694 (717)
Q Consensus 619 ~~~~GL~a~I~t~d~~~a~~~~~~l~~G~v~iN~~~~~-~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v~~ 694 (717)
+++|||++||||+|.+++.++++++++|+|+||+++.. .+..||||.|+||+| +++|++|+++|++.|+|.+
T Consensus 381 ~~~~gL~~~i~t~d~~~a~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~~~SG~G----~~~g~~~~~~~~~~k~i~~ 453 (453)
T cd07094 381 STDYGLQAGIFTRDLNVAFKAAEKLEVGGVMVNDSSAFRTDWMPFGGVKESGVG----REGVPYAMEEMTEEKTVVI 453 (453)
T ss_pred CCCCCCeeEEECCCHHHHHHHHHhcCcCeEEEcCCCCCCCCCCCCCCccccccC----cCChHHHHHHHhceeEEeC
Confidence 99999999999999999999999999999999998654 467899999999986 3569999999999999863
No 57
>TIGR01804 BADH glycine betaine aldehyde dehydrogenase. Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171).
Probab=100.00 E-value=1.7e-72 Score=634.01 Aligned_cols=392 Identities=16% Similarity=0.189 Sum_probs=336.5
Q ss_pred HHHhcCCcceEEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhh
Q 005041 270 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 349 (717)
Q Consensus 270 ~~~~tg~~iGT~i~a~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~ 349 (717)
.+|++++.++.+..++ .+|+++++++|++||+.|+++|.++|.++|++++++|++|+++|++++.+|++++..
T Consensus 18 ~nP~t~~~i~~~~~~~------~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~- 90 (467)
T TIGR01804 18 INPANQEVIATVAEAT------REDVERAIAAARRAQGEWASMTPEERGRILRRIAELIRERNEELAKLETLDTGKTLE- 90 (467)
T ss_pred ECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH-
Confidence 5688999999988888 899999999999999999999999999999999999999999999998887765432
Q ss_pred chhHHHHHHhhcChhHHHHHHHHHHHHhcccccc-cccccccccCCCceEEEeecceeEEEEEcCC-Cch-hHHHHHHHH
Q 005041 350 GYAKSLVSRLALKPGKISSLAKSIRILADMEEPI-GQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 426 (717)
Q Consensus 350 g~~~a~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~A 426 (717)
++. ..++..+++.+++++...+.. +...+. ......+++|+|+|||++|+|| ||. +.++++++|
T Consensus 91 ---~a~-------~~ev~~~~~~l~~~a~~~~~~~~~~~~~---~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~A 157 (467)
T TIGR01804 91 ---ETS-------VADMDDIADVFEFFAGLADKDGGEIIPL---PIPSFSYTIREPLGVCVGIGAWNYPLQIASWKIAPA 157 (467)
T ss_pred ---HHh-------HHHHHHHHHHHHHHHHHHHHhCCccccC---CCCceEEEEEeeeeEEEEECCCchHHHHHHHHHHHH
Confidence 221 136667777777776544332 222211 1113457889999999999998 685 567999999
Q ss_pred HHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHhhc-
Q 005041 427 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST- 503 (717)
Q Consensus 427 LaaGN~vVlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a- 503 (717)
|++||+||+|||+.||+|+..+++++.+ + +|+|++|+|++ +.++++.|..||+||+|+||||+++|+.|++.+
T Consensus 158 LaaGN~VvlKps~~tp~~~~~l~~~~~~----aglP~gv~~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~a~ 233 (467)
T TIGR01804 158 LAAGNAMVFKPSEITPLTALKVAELMEE----AGLPDGVFNVVLGKGAEVGEPLVNHKDVAKVSFTGGVPTGKKIMAAAA 233 (467)
T ss_pred HhcCCEEEeeCCccCcHHHHHHHHHHHH----cCcCcCcEEEEeCCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHH
Confidence 9999999999999999999999999986 7 99999999996 467888888999999999999999999999887
Q ss_pred --CCCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccChhhHHHHHHHHHHcCc-------
Q 005041 504 --KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------- 573 (717)
Q Consensus 504 --~~p~~lElGGk~p~iV~~dADl~~A~~~i~~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~------- 573 (717)
.||+++|||||||+||++|||+|.|++.+++++|.|+| .|+|++|||||+++| |+|+++|+++++++.+
T Consensus 234 ~~l~~~~lElGG~~~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~g~p~~~~ 312 (467)
T TIGR01804 234 DHLKHVTMELGGKSPLIVFDDADLELAVDQAMNGNFFSAGQVCSNGTRVFVHNKIK-EKFEARLVERTKRIKLGDGFDEA 312 (467)
T ss_pred hcCCcEEEecCCCCeeEECCCCCHHHHHHHHHHHHHHhcCCCCCCCCEEEEcHHHH-HHHHHHHHHHHHhCCCCCCCCCC
Confidence 38999999999999999999999999999999999986 999999999999999 8999999999876521
Q ss_pred ---------------------------eE-ecCccc------cc-cc-c-C-----CCCccccccccCceEEEEEeCCHH
Q 005041 574 ---------------------------GL-FGGPRA------SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVR 611 (717)
Q Consensus 574 ---------------------------~~-~g~~~~------~~-~~-p-i-----~~~~~~~eE~FGPVl~v~~~~~~d 611 (717)
++ .|+... .+ |+ | | +++++++||+||||++|++|+|+|
T Consensus 313 ~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~d 392 (467)
T TIGR01804 313 TEMGPLISAEHRDKVESYIEKGKEEGATLACGGKRPEREGLQNGFFIEPTVFTDCTDDMTIVREEIFGPVMTVLTFSSED 392 (467)
T ss_pred CccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCeEEeeEEEeCCCCCChHHhCCCCCceEEEEecCCHH
Confidence 12 233221 13 33 5 2 368999999999999999999999
Q ss_pred HHHHHHHhcCCCceeEEEecCHHHHHHHHhcCCeeeEEEcCCCCCCCCCccCCccccccccCcccccccchhhcccEEE
Q 005041 612 AAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTR 690 (717)
Q Consensus 612 eAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k 690 (717)
|||+++|+++|||++||||+|.+++.++++++++|+|+||+.....+..||||.+.||+| +++|.+|+++||+.|
T Consensus 393 eai~~~n~~~~gLsa~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G----~~~g~~~~~~~~~~~ 467 (467)
T TIGR01804 393 EVIARANDTIYGLAAGVFTADLGRAHRVANQLKAGTVWINDFHPYPAEAPWGGYKQSGIG----RENGKAGLAEYTEVK 467 (467)
T ss_pred HHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccCccC----CCChHHHHHHHhccC
Confidence 999999999999999999999999999999999999999997766667899999999986 356999999999875
No 58
>cd07124 ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA. Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis.
Probab=100.00 E-value=5.1e-72 Score=635.29 Aligned_cols=427 Identities=18% Similarity=0.202 Sum_probs=350.9
Q ss_pred ChHHHHHHHHHHHHcCCc---EEEEeCC-----CcchHHHHhc-CCcceEEEecCCcccccHhhHHHHHHHHHHHHHHHh
Q 005041 240 GMTAKVNAAYCAACAGIP---VVITSGF-----AMDSIIKVLE-GKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQ 310 (717)
Q Consensus 240 gM~~Kv~aa~~a~~~gi~---v~I~~g~-----~~~~l~~~~t-g~~iGT~i~a~~~~~~~~~~v~~av~~A~~A~~~w~ 310 (717)
-|..+++.++..+++..+ -.+++|. ..-.+.+|.+ ++.++++..++ .+|+++++++|++||+.|+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~v~~P~t~~~~i~~~~~a~------~~~v~~av~~A~~A~~~W~ 86 (512)
T cd07124 13 ENRAAFRAALARVREELGREYPLVIGGKEVRTEEKIESRNPADPSEVLGTVQKAT------KEEAEAAVQAARAAFPTWR 86 (512)
T ss_pred HHHHHHHHHHHHHHhhcccccceeECCEEecCCCeEEeECCCCCCceEEEEeCCC------HHHHHHHHHHHHHHHHHHh
Confidence 455567777666555422 1233442 1223478897 99999998888 8999999999999999999
Q ss_pred cCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhhchhHHHHHHhhcChhHHHHHHHHHHHHhccccc-ccccccc
Q 005041 311 ALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKR 389 (717)
Q Consensus 311 ~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~g~~~a~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~ 389 (717)
++|.++|.++|++++++|++|+++|++++++|+|++.. ++. .|+...++.+++++...+. .+...+.
T Consensus 87 ~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~----ea~--------~ev~~~i~~~~~~~~~~~~~~~~~~~~ 154 (512)
T cd07124 87 RTPPEERARLLLRAAALLRRRRFELAAWMVLEVGKNWA----EAD--------ADVAEAIDFLEYYAREMLRLRGFPVEM 154 (512)
T ss_pred cCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHcCcCHH----HHH--------HHHHHHHHHHHHHHHHHHHhcCccccC
Confidence 99999999999999999999999999999888766532 221 2455555555555533321 1222111
Q ss_pred cccCCCceEEEeecceeEEEEEcCC-Cch-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceE
Q 005041 390 TELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIG 466 (717)
Q Consensus 390 ~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~ 466 (717)
..+...+++++|+|||++|+|| ||. +.+++++|||++||+||+|||+.||+|+..+++++.+ + +|+|++|
T Consensus 155 ---~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~----aGlP~gvv~ 227 (512)
T cd07124 155 ---VPGEDNRYVYRPLGVGAVISPWNFPLAILAGMTTAALVTGNTVVLKPAEDTPVIAAKLVEILEE----AGLPPGVVN 227 (512)
T ss_pred ---CCCceeEEEEecceEEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCccccHHHHHHHHHHHH----hCcCCCceE
Confidence 1234567889999999999998 686 5679999999999999999999999999999999987 7 9999999
Q ss_pred EecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHhhc---------CCCEEEecCCcceEEEcCCCCHHHHHHHHHhhc
Q 005041 467 LVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST---------KIPVLGHADGICHVYVDKSANLDVAKNIVIDAK 536 (717)
Q Consensus 467 vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a---------~~p~~lElGGk~p~iV~~dADl~~A~~~i~~~~ 536 (717)
+|+| +.++++.|..||++|+|+||||+.+|+.|++.+ .+|+++|||||||+||++|||+|.|++.+++++
T Consensus 228 vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~~~~l~~~~lElgGk~p~iV~~daDl~~Aa~~i~~~~ 307 (512)
T cd07124 228 FLPGPGEEVGDYLVEHPDVRFIAFTGSREVGLRIYERAAKVQPGQKWLKRVIAEMGGKNAIIVDEDADLDEAAEGIVRSA 307 (512)
T ss_pred EeccCchHHHHHHhcCCCCCEEEEeCchHHHHHHHHHHhcccccccCCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHH
Confidence 9996 566888899999999999999999999998764 369999999999999999999999999999999
Q ss_pred cCCCc-cccccceEEEcCcccChhhHHHHHHHHHHcCc---------------------------------eE-ecCccc
Q 005041 537 IDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV---------------------------------GL-FGGPRA 581 (717)
Q Consensus 537 ~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~---------------------------------~~-~g~~~~ 581 (717)
|.|+| .|+|++|||||+++| |+|+++|+++++++.+ ++ .|+...
T Consensus 308 f~~~GQ~C~a~~rv~V~~~i~-~~f~~~l~~~~~~~~~g~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~g~~vl~gG~~~ 386 (512)
T cd07124 308 FGFQGQKCSACSRVIVHESVY-DEFLERLVERTKALKVGDPEDPEVYMGPVIDKGARDRIRRYIEIGKSEGRLLLGGEVL 386 (512)
T ss_pred HhhCCCccccceEEEEcHHHH-HHHHHHHHHHHHhCCCCCCCCCCCcccCCcCHHHHHHHHHHHHHHHhCCEEEecCccC
Confidence 99987 999999999999999 8999999999987532 11 233221
Q ss_pred ----ccc-c-c-C-----CCCccccccccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEecCHHHHHHHHhcCCeeeEE
Q 005041 582 ----SKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVF 649 (717)
Q Consensus 582 ----~~~-~-p-i-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~v~ 649 (717)
.++ + | | ++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.++++++++|+|+
T Consensus 387 ~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~ 466 (512)
T cd07124 387 ELAAEGYFVQPTIFADVPPDHRLAQEEIFGPVLAVIKAKDFDEALEIANDTEYGLTGGVFSRSPEHLERARREFEVGNLY 466 (512)
T ss_pred CCCCCCceEcCEEEecCCCCChHHhCCCcCCeEEEEecCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCcceEE
Confidence 233 3 6 2 35899999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCCCCCC--CCCccCCccccccccCcccccccchhhcccEEEEEEec
Q 005041 650 HNASTRFC--DGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRG 695 (717)
Q Consensus 650 iN~~~~~~--~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v~~~ 695 (717)
||+++... +..||||.+.||+|. +++|.+|+++||+.|+|.++
T Consensus 467 vN~~~~~~~~~~~PfGG~k~SG~G~---~~~g~~~~~~~t~~k~v~~~ 511 (512)
T cd07124 467 ANRKITGALVGRQPFGGFKMSGTGS---KAGGPDYLLQFMQPKTVTEN 511 (512)
T ss_pred ECCCCCCCCCCCCCCCccccccCCC---ccCcHHHHHHhccEEEEEEe
Confidence 99876432 458999999999861 23579999999999999875
No 59
>cd07118 ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydrogenase-like. Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase.
Probab=100.00 E-value=2.6e-72 Score=629.54 Aligned_cols=394 Identities=21% Similarity=0.241 Sum_probs=337.6
Q ss_pred HHhcCCcceEEEecCCcccccHhhHHHHHHHHHHHHHH--HhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHh
Q 005041 271 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRR--LQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 348 (717)
Q Consensus 271 ~~~tg~~iGT~i~a~~~~~~~~~~v~~av~~A~~A~~~--w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~ 348 (717)
+|.+++.++++..++ .+|+++++++|++||++ |+++|.++|.++|++++++|++|+++|++++++|+|++..
T Consensus 3 ~P~t~~~i~~~~~~~------~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~l~~~a~~l~~~~~~la~~~~~e~Gk~~~ 76 (454)
T cd07118 3 SPAHGVVVARYAEGT------VEDVDAAVAAARKAFDKGPWPRMSGAERAAVLLKVADLIRARRERLALIETLESGKPIS 76 (454)
T ss_pred CCCCCCEEEEEeCCC------HHHHHHHHHHHHHHcCCCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH
Confidence 477899999999888 89999999999999985 9999999999999999999999999999998877765421
Q ss_pred hchhHHHHHHhhcChhHHHHHHHHHHHHhccccc-ccccccccccCCCceEEEeecceeEEEEEcCC-Cch-hHHHHHHH
Q 005041 349 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 425 (717)
Q Consensus 349 ~g~~~a~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ 425 (717)
++ ..|+..+++.+++++...+. .+...+. ...+...+++|+|+|||++|+|| ||. ++++++++
T Consensus 77 ----~a--------~~ev~~~i~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~i~~ 142 (454)
T cd07118 77 ----QA--------RGEIEGAADLWRYAASLARTLHGDSYNN--LGDDMLGLVLREPIGVVGIITPWNFPFLILSQKLPF 142 (454)
T ss_pred ----HH--------HHHHHHHHHHHHHHHHHHHHhcCccccc--CCCCceeeEEeecceEEEEECCCCcHHHHHHHHHHH
Confidence 21 24666777777766653322 1222211 11233457889999999999998 796 56799999
Q ss_pred HHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHhhc
Q 005041 426 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST 503 (717)
Q Consensus 426 ALaaGN~vVlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a 503 (717)
||++||+||+|||+.+|+|+.++++++.+ + +|+|++|+|++ +.++++.|..||+||+|+||||+++|+.|++.+
T Consensus 143 ALaaGN~Vi~Kps~~~p~~~~~l~~~~~~----aG~P~g~~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a 218 (454)
T cd07118 143 ALAAGCTVVVKPSEFTSGTTLMLAELLIE----AGLPAGVVNIVTGYGATVGQAMTEHPDVDMVSFTGSTRVGKAIAAAA 218 (454)
T ss_pred HHhcCCEEEEECCCCCcHHHHHHHHHHHh----cCCCccceEEEecCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHH
Confidence 99999999999999999999999999987 7 99999999995 556788888999999999999999999998876
Q ss_pred ---CCCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccChhhHHHHHHHHHHcCc------
Q 005041 504 ---KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------ 573 (717)
Q Consensus 504 ---~~p~~lElGGk~p~iV~~dADl~~A~~~i~~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~------ 573 (717)
.+|+++|||||||+||++|||+|.|++.+++++|.|+| .|+|++|||||+++| |+|+++|+++++++.+
T Consensus 219 a~~~~~~~lelgG~n~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~-d~f~~~L~~~~~~l~~g~p~~~ 297 (454)
T cd07118 219 ARNLKKVSLELGGKNPQIVFADADLDAAADAVVFGVYFNAGECCNSGSRLLVHESIA-DAFVAAVVARSRKVRVGDPLDP 297 (454)
T ss_pred HhcCCcEEeccCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCCCCceEEEcHHHH-HHHHHHHHHHHHhcCcCCCCCC
Confidence 38999999999999999999999999999999999976 999999999999999 8999999999887532
Q ss_pred ----------------------------eE-ecCccc---ccc-c-c-C-----CCCccccccccCceEEEEEeCCHHHH
Q 005041 574 ----------------------------GL-FGGPRA---SKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAA 613 (717)
Q Consensus 574 ----------------------------~~-~g~~~~---~~~-~-p-i-----~~~~~~~eE~FGPVl~v~~~~~~deA 613 (717)
++ +|+... .++ + | | ++|++++||+||||++|++|+|+|||
T Consensus 298 ~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~ea 377 (454)
T cd07118 298 ETKVGAIINEAQLAKITDYVDAGRAEGATLLLGGERLASAAGLFYQPTIFTDVTPDMAIAREEIFGPVLSVLTFDTVDEA 377 (454)
T ss_pred CCcCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCCCCCCCCCeEEeCEEEeCCCCCCHHHhCCCCCceEEEEEECCHHHH
Confidence 11 233221 233 3 5 2 35889999999999999999999999
Q ss_pred HHHHHhcCCCceeEEEecCHHHHHHHHhcCCeeeEEEcCCCCCCCCCccCCccccccccCcccccccchhhcccEEEEEE
Q 005041 614 IDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 693 (717)
Q Consensus 614 i~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v~ 693 (717)
|+++|+++|||++||||+|.++++++++++++|.|+||+.....+..||||.+.||+| +++|++|+++||+.|++.
T Consensus 378 i~~~n~~~~gL~~~vft~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~PfgG~~~SG~G----~~~g~~~l~~~t~~k~~~ 453 (454)
T cd07118 378 IALANDTVYGLSAGVWSKDIDTALTVARRIRAGTVWVNTFLDGSPELPFGGFKQSGIG----RELGRYGVEEYTELKTVH 453 (454)
T ss_pred HHHHhCCCccceEEEECCCHHHHHHHHHhcCcCEEEECCCCCCCCCCCcCCcccccCC----cCchHHHHHHHhceeEEe
Confidence 9999999999999999999999999999999999999998776778899999999986 356899999999999985
No 60
>cd07119 ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like. Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde.
Probab=100.00 E-value=3.1e-72 Score=634.28 Aligned_cols=398 Identities=20% Similarity=0.233 Sum_probs=339.8
Q ss_pred HHHHhcCCcceEEEecCCcccccHhhHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
Q 005041 269 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSR--RLQALQSQDRRKILLDVADALEANESLIKVENEADVAAA 346 (717)
Q Consensus 269 l~~~~tg~~iGT~i~a~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~ 346 (717)
..+|.+++.++++...+ .+|+++++++|++||+ .|+++|..+|.++|++++++|++++++|++++++|++++
T Consensus 17 ~~~P~tg~~i~~~~~~~------~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~ 90 (482)
T cd07119 17 IINPANGEVIATVPEGT------AEDAKRAIAAARRAFDSGEWPHLPAQERAALLFRIADKIREDAEELARLETLNTGKT 90 (482)
T ss_pred eeCCCCCCEEEEEeCCC------HHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCC
Confidence 35688999999998888 8999999999999997 599999999999999999999999999999988877654
Q ss_pred HhhchhHHHHHHhhcChhHHHHHHHHHHHHhcccc-cccccccccccCCCceEEEeecceeEEEEEcCC-Cch-hHHHHH
Q 005041 347 QEAGYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIA 423 (717)
Q Consensus 347 ~~~g~~~a~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~ 423 (717)
.. ++ ..|+...++.+++++...+ ..+...+. ..+...+++|+|+|||++|+|| ||. +.++++
T Consensus 91 ~~----~a--------~~ev~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~ 155 (482)
T cd07119 91 LR----ES--------EIDIDDVANCFRYYAGLATKETGEVYDV---PPHVISRTVREPVGVCGLITPWNYPLLQAAWKL 155 (482)
T ss_pred HH----HH--------HHHHHHHHHHHHHHHHHHHHhcCccccC---CCCceEEEEEeeeeeEEEEcCCchHHHHHHHHH
Confidence 21 22 1255666666666654432 22322221 1234567899999999999998 785 567999
Q ss_pred HHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHh
Q 005041 424 SLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKE 501 (717)
Q Consensus 424 ~~ALaaGN~vVlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~ 501 (717)
++||++||+||+|||+.+|+|+.++++++.+ + +|+|++|+|++ ++++++.|..||++|+|+||||+++|+.|++
T Consensus 156 ~~ALaaGN~VilKps~~~p~~~~~l~~~~~~----aGlP~gv~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~ 231 (482)
T cd07119 156 APALAAGNTVVIKPSEVTPLTTIALFELIEE----AGLPAGVVNLVTGSGATVGAELAESPDVDLVSFTGGTATGRSIMR 231 (482)
T ss_pred HHHHhcCCEEEEECCccccHHHHHHHHHHHH----cCCCcCcEEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHH
Confidence 9999999999999999999999999999987 7 99999999996 4557888889999999999999999999998
Q ss_pred hc---CCCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccChhhHHHHHHHHHHcCc----
Q 005041 502 ST---KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV---- 573 (717)
Q Consensus 502 ~a---~~p~~lElGGk~p~iV~~dADl~~A~~~i~~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~---- 573 (717)
.+ .+|+++|||||||+||++|||+|.|++.+++++|.|+| .|++++|||||+++| |+|+++|+++++++.+
T Consensus 232 ~aa~~~~~~~lElGGkn~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~-d~f~~~l~~~~~~~~~G~~~ 310 (482)
T cd07119 232 AAAGNVKKVALELGGKNPNIVFADADFETAVDQALNGVFFNAGQVCSAGSRLLVEESIH-DKFVAALAERAKKIKLGNGL 310 (482)
T ss_pred HHHhcCCcEEEECCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHH-HHHHHHHHHHHHhcCCCCCC
Confidence 77 38999999999999999999999999999999999976 999999999999999 8999999999887531
Q ss_pred ------------------------------eE-ecCccc------ccc-c-c-C-----CCCccccccccCceEEEEEeC
Q 005041 574 ------------------------------GL-FGGPRA------SKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVD 608 (717)
Q Consensus 574 ------------------------------~~-~g~~~~------~~~-~-p-i-----~~~~~~~eE~FGPVl~v~~~~ 608 (717)
++ +|+... .++ + | | ++|++++||+||||++|++|+
T Consensus 311 ~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~ 390 (482)
T cd07119 311 DADTEMGPLVSAEHREKVLSYIQLGKEEGARLVCGGKRPTGDELAKGYFVEPTIFDDVDRTMRIVQEEIFGPVLTVERFD 390 (482)
T ss_pred CCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCceECCEEEecCCCCChHhhCCCCCceEEEeccC
Confidence 11 233321 133 3 5 2 358899999999999999999
Q ss_pred CHHHHHHHHHhcCCCceeEEEecCHHHHHHHHhcCCeeeEEEcCCCCCCCCCccCCccccccccCcccccccchhhcccE
Q 005041 609 DVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLT 688 (717)
Q Consensus 609 ~~deAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~ 688 (717)
|+||||+++|+++|||++||||+|.+++.++++++++|+|+||++....+..||||.+.||+| +++|++|+++||+
T Consensus 391 ~~deai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G----~~~G~~~l~~~t~ 466 (482)
T cd07119 391 TEEEAIRLANDTPYGLAGAVWTKDIARANRVARRLRAGTVWINDYHPYFAEAPWGGYKQSGIG----RELGPTGLEEYQE 466 (482)
T ss_pred CHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCcccCcCC----ccchHHHHHHHhc
Confidence 999999999999999999999999999999999999999999987666677899999999986 2469999999999
Q ss_pred EEEEEecC
Q 005041 689 TRWILRGN 696 (717)
Q Consensus 689 ~k~v~~~~ 696 (717)
.|+++++.
T Consensus 467 ~k~v~~~~ 474 (482)
T cd07119 467 TKHININL 474 (482)
T ss_pred eEEEEEec
Confidence 99998864
No 61
>TIGR01237 D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative. This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs.
Probab=100.00 E-value=6.4e-72 Score=633.82 Aligned_cols=398 Identities=17% Similarity=0.189 Sum_probs=335.5
Q ss_pred HHHhc-CCcceEEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHh
Q 005041 270 IKVLE-GKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 348 (717)
Q Consensus 270 ~~~~t-g~~iGT~i~a~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~ 348 (717)
.+|.+ ++.++++..++ .+|+++++++|++||+.|+++|.++|.++|++++++|++|+++|++++++|.|++..
T Consensus 51 ~~P~~~~~~i~~~~~~~------~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ 124 (511)
T TIGR01237 51 INPCDPSEVVGKVGKAS------VEQAEHALQIAKKAFEAWKKTPVRERAGILRKAAAIMERRRHELNALICLEVGKIIP 124 (511)
T ss_pred ECCCCCCcEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHcCCCHH
Confidence 67884 88899988888 899999999999999999999999999999999999999999999998887765432
Q ss_pred hchhHHHHHHhhcChhHHHHHHHHHHHHhccccc-ccccccccccCCCceEEEeecceeEEEEEcCC-Cch-hHHHHHHH
Q 005041 349 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 425 (717)
Q Consensus 349 ~g~~~a~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ 425 (717)
++ ..|+...++.+++++...+. .+...+. ...+...+++|+|+|||++|+|| ||. +.+++++|
T Consensus 125 ----~a--------~~ev~~~~~~~~~~a~~~~~~~~~~~~~--~~~~~~~~~~~~P~GVV~~I~P~N~P~~~~~~~i~~ 190 (511)
T TIGR01237 125 ----EA--------DAEVAEAIDFCEYYAREMERLAGQGVNL--DIEGETNRYFYQPRGVAVVISPWNFPMAIAVGMTVA 190 (511)
T ss_pred ----HH--------HHHHHHHHHHHHHHHHHHHHhcCccccC--CCCCceeEEEEecceeEEEECCCCcHHHHHHHHHHH
Confidence 21 12455555566655543321 1221111 11234567889999999999998 685 56799999
Q ss_pred HHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHhhc
Q 005041 426 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST 503 (717)
Q Consensus 426 ALaaGN~vVlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a 503 (717)
||++||+||+|||+.||+++..+++++.+ + +|+|++|+|+| +.++++.|..||++++|+||||+++|+.|++.+
T Consensus 191 ALaaGN~VVlKPs~~tp~~~~~l~~~~~~----aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~a 266 (511)
T TIGR01237 191 PIVTGNCVVLKPAETSTVIAAKIVEILIE----AGLPPGVFQFVPGKGSEVGSYLVNHPKTHLITFTGSREVGCRIYEDA 266 (511)
T ss_pred HHHcCCEEEEECCCCCcHHHHHHHHHHHH----hCCCCCcEEEccCCCchhHHHHhcCCCCCeEEEECchHHHHHHHHHH
Confidence 99999999999999999999999999987 7 99999999996 566888888999999999999999999998765
Q ss_pred C---------CCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccChhhHHHHHHHHHHcCc
Q 005041 504 K---------IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV 573 (717)
Q Consensus 504 ~---------~p~~lElGGk~p~iV~~dADl~~A~~~i~~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~ 573 (717)
. +|+++|||||||+||++|||+|.|++.+++++|.|+| .|+|++|+|||+++| |+|+++|+++++++.+
T Consensus 267 a~~~~~~~~~~~~~lElgG~~p~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~L~~~~~~l~~ 345 (511)
T TIGR01237 267 AKVQPGQKHLKRVIAEMGGKDAIIVDESADIEQAVAGAVYSAFGFTGQKCSACSRVVVLSPVY-DAVVERFVEATRSLNV 345 (511)
T ss_pred hcccccccccceeEeccCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCcccceEEEEehhHH-HHHHHHHHHHHHhCCC
Confidence 3 6999999999999999999999999999999999987 999999999999999 8999999999887632
Q ss_pred e----------------------------------EecCccc--ccc-c-c-C-----CCCccccccccCceEEEEEeCC
Q 005041 574 G----------------------------------LFGGPRA--SKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVDD 609 (717)
Q Consensus 574 ~----------------------------------~~g~~~~--~~~-~-p-i-----~~~~~~~eE~FGPVl~v~~~~~ 609 (717)
. +.|+... .++ + | | ++|++++||+||||++|++|+|
T Consensus 346 g~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~g~~l~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPVl~v~~~~~ 425 (511)
T TIGR01237 346 GPTDDPSTQVGPVIDQKSQAKIQEYIEQGKAEGELAIGGCDAPSEGYFIGPTIFKDVDRHARLAQEEIFGPVVAIIRAAD 425 (511)
T ss_pred CCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCCcEEECCccCCCCCeEEcCEEEeCCCCCChHhhCCCcCCeEEEEeeCC
Confidence 1 1232211 133 3 5 2 3589999999999999999999
Q ss_pred HHHHHHHHHhcCCCceeEEEecCHHHHHHHHhcCCeeeEEEcCCCCCC--CCCccCCccccccccCcccccccchhhccc
Q 005041 610 VRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFC--DGARFGLGAEVGISTSRIHARGPVGVEGLL 687 (717)
Q Consensus 610 ~deAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~v~iN~~~~~~--~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft 687 (717)
+||||+++|+++|||++||||+|.+++.++++++++|+|+||+..... +..||||.+.||+|. +.+|++|+++||
T Consensus 426 ~deai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~k~SG~G~---~~~g~~~l~~~~ 502 (511)
T TIGR01237 426 FDEALEIANGTEYGLTGGVYSNTRDHIERAAAEFEVGNLYFNRTITGAIVGRQPFGGFKMSGTDS---KAGGPDYLLQFM 502 (511)
T ss_pred HHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccccCCC---cCCCHHHHHHhc
Confidence 999999999999999999999999999999999999999999876432 357999999999862 236899999999
Q ss_pred EEEEEEec
Q 005041 688 TTRWILRG 695 (717)
Q Consensus 688 ~~k~v~~~ 695 (717)
+.|+|..+
T Consensus 503 ~~k~v~~~ 510 (511)
T TIGR01237 503 QPKTVTEN 510 (511)
T ss_pred ceEEEEEe
Confidence 99999764
No 62
>cd07091 ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins. ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the co
Probab=100.00 E-value=4.4e-72 Score=632.15 Aligned_cols=397 Identities=17% Similarity=0.185 Sum_probs=339.1
Q ss_pred HHHHhcCCcceEEEecCCcccccHhhHHHHHHHHHHHHHHHh--cCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
Q 005041 269 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQ--ALQSQDRRKILLDVADALEANESLIKVENEADVAAA 346 (717)
Q Consensus 269 l~~~~tg~~iGT~i~a~~~~~~~~~~v~~av~~A~~A~~~w~--~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~ 346 (717)
..+|++++.++++..++ .+|+++++++|++||+.|+ ++|.++|.++|++++++|++|+++|++++++|++++
T Consensus 23 ~~~P~t~~~i~~~~~~~------~~~v~~av~~A~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~ 96 (476)
T cd07091 23 TINPATEEVICQVAEAD------EEDVDAAVKAARAAFETGWWRKMDPRERGRLLNKLADLIERDRDELAALESLDNGKP 96 (476)
T ss_pred eECCCCCCEEEEEeCCC------HHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCC
Confidence 35688999999988888 8999999999999999854 999999999999999999999999999988877654
Q ss_pred HhhchhHHHHHHhhcChhHHHHHHHHHHHHhccccc-ccccccccccCCCceEEEeecceeEEEEEcCC-Cch-hHHHHH
Q 005041 347 QEAGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIA 423 (717)
Q Consensus 347 ~~~g~~~a~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~ 423 (717)
.. +.. ..|+..+++.+++++...+. .+...+. ..+...+++++|+|||++|+|| ||. ++++++
T Consensus 97 ~~----~~~-------~~ev~~~~~~~~~~a~~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~ 162 (476)
T cd07091 97 LE----ESA-------KGDVALSIKCLRYYAGWADKIQGKTIPI---DGNFLAYTRREPIGVCGQIIPWNFPLLMLAWKL 162 (476)
T ss_pred HH----HHH-------HHHHHHHHHHHHHHHHHHHHhcCccccC---CCCceEEEEEeceeEEEEECCCcCHHHHHHHHH
Confidence 21 111 23667777777777654332 2332221 1344567899999999999998 786 567999
Q ss_pred HHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHh
Q 005041 424 SLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKE 501 (717)
Q Consensus 424 ~~ALaaGN~vVlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~ 501 (717)
+|||++||+||+|||+.||.|+..+++++.+ + ||+|++|+|++ +.++++.|..||++|+|+||||+++|+.|++
T Consensus 163 ~~AL~aGN~VvlKps~~~p~~~~~l~~~~~~----aglP~g~~~~v~g~~~~~~~~L~~~~~vd~V~fTGs~~~g~~v~~ 238 (476)
T cd07091 163 APALAAGNTVVLKPAEQTPLSALYLAELIKE----AGFPPGVVNIVPGFGPTAGAAISSHMDVDKIAFTGSTAVGRTIME 238 (476)
T ss_pred HHHHHcCCEEEEeCCCCChHHHHHHHHHHHH----cCcCCCcEEEEeCCChhHHHHHhcCCCcCEEEEECcHHHHHHHHH
Confidence 9999999999999999999999999999987 7 99999999996 5667888889999999999999999999998
Q ss_pred hcC----CCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccChhhHHHHHHHHHHcCc---
Q 005041 502 STK----IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV--- 573 (717)
Q Consensus 502 ~a~----~p~~lElGGk~p~iV~~dADl~~A~~~i~~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~--- 573 (717)
.+. +|+++|||||||+||++|||++.|++.+++|+|.|+| .|+|++|||||+++| |+|+++|+++++++.+
T Consensus 239 ~aa~~~~~~~~lElgG~~~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~v~-~~f~~~L~~~~~~~~~g~p 317 (476)
T cd07091 239 AAAKSNLKKVTLELGGKSPNIVFDDADLDKAVEWAAFGIFFNQGQCCCAGSRIFVQESIY-DEFVEKFKARAEKRVVGDP 317 (476)
T ss_pred HHHhcCCceEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEeHHHH-HHHHHHHHHHHhhCCCCCC
Confidence 662 7999999999999999999999999999999999987 999999999999999 8999999999887532
Q ss_pred -------------------------------eE-ecCccc--cc-cc-c-C-----CCCccccccccCceEEEEEeCCHH
Q 005041 574 -------------------------------GL-FGGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVR 611 (717)
Q Consensus 574 -------------------------------~~-~g~~~~--~~-~~-p-i-----~~~~~~~eE~FGPVl~v~~~~~~d 611 (717)
++ +|+... .+ ++ | | ++|++++||+||||++|++|+|+|
T Consensus 318 ~~~~~~~gpli~~~~~~~v~~~i~~a~~~ga~vl~gg~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~ 397 (476)
T cd07091 318 FDPDTFQGPQVSKAQFDKILSYIESGKKEGATLLTGGERHGSKGYFIQPTVFTDVKDDMKIAKEEIFGPVVTILKFKTED 397 (476)
T ss_pred CCCCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCceECcEEecCCCCCChhhhCCCCCCeEEEeecCCHH
Confidence 11 233221 12 33 5 2 357899999999999999999999
Q ss_pred HHHHHHHhcCCCceeEEEecCHHHHHHHHhcCCeeeEEEcCCCCCCCCCccCCccccccccCcccccccchhhcccEEEE
Q 005041 612 AAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRW 691 (717)
Q Consensus 612 eAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~ 691 (717)
|||+++|+++|||++||||+|.+++.++++++++|+|+||++....+.+||||.+.||+| +++|.+|+++||+.|+
T Consensus 398 eai~~~n~~~~gLsa~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~k~SG~G----~~~g~~~~~~f~~~k~ 473 (476)
T cd07091 398 EVIERANDTEYGLAAGVFTKDINKALRVSRALKAGTVWVNTYNVFDAAVPFGGFKQSGFG----RELGEEGLEEYTQVKA 473 (476)
T ss_pred HHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCcccCcCC----ccchHHHHHHhhceeE
Confidence 999999999999999999999999999999999999999997777778899999999986 3569999999999999
Q ss_pred EEe
Q 005041 692 ILR 694 (717)
Q Consensus 692 v~~ 694 (717)
+.+
T Consensus 474 ~~~ 476 (476)
T cd07091 474 VTI 476 (476)
T ss_pred EeC
Confidence 863
No 63
>TIGR03250 PhnAcAld_DH putative phosphonoacetaldehyde dehydrogenase. It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme.
Probab=100.00 E-value=8.9e-72 Score=627.28 Aligned_cols=397 Identities=18% Similarity=0.186 Sum_probs=333.2
Q ss_pred HHHhcCCcceEEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhh
Q 005041 270 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 349 (717)
Q Consensus 270 ~~~~tg~~iGT~i~a~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~ 349 (717)
.+|.+++.++++..++ .+|+++|+++|++|| ++++..+|.++|++++++|++|.++|++++++|+|++..
T Consensus 22 ~~P~t~~~i~~~~~~~------~~~v~~av~~A~~a~---~~~~~~~R~~~l~~~a~~l~~~~~ela~~~~~e~Gk~~~- 91 (472)
T TIGR03250 22 RYPYNGTVVGTVPKAS------VDDVRRAFAIAAAYR---PTLTRYERSAILDRAAALLAARKEEISDLITLESGLSKK- 91 (472)
T ss_pred ECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHH---hhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHH-
Confidence 5678999999998888 899999999999876 468999999999999999999999999999888766532
Q ss_pred chhHHHHHHhhcChhHHHHHHHHHHHHhcccc-ccccccccc--ccCCCceEEEeecce-eEEEEEcCC-Cch-hHHHHH
Q 005041 350 GYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRT--ELADGLILEKTSCPL-GVLLIVFES-RPD-ALVQIA 423 (717)
Q Consensus 350 g~~~a~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~Pl-GVV~~I~p~-~P~-~~~~~~ 423 (717)
++ ..|+..+++.+++++.... ..+...+.. ....+...+++|+|+ |||++|+|| ||. ++++++
T Consensus 92 ---~a--------~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~Gvv~~I~P~N~P~~~~~~~~ 160 (472)
T TIGR03250 92 ---DS--------LYEVGRVADVLTFAAAEALRDDGQIFSCDLTPHGKARKVFTQREPLLGVISAITPFNHPMNQVAHKI 160 (472)
T ss_pred ---HH--------HHHHHHHHHHHHHHHHHHHHhcCcccccccCCCCCCceEEEEEcCCCCEEEEEcCCcHHHHHHHHHH
Confidence 21 2356667777777664432 222221100 001233567899998 999999998 685 567999
Q ss_pred HHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHh
Q 005041 424 SLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKE 501 (717)
Q Consensus 424 ~~ALaaGN~vVlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~ 501 (717)
++||++||+||+|||+.+|+|+..+++++.+ + +|+|++|+|+| +.+++..|..||++++|+||||+++|+.|++
T Consensus 161 ~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~----aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~ 236 (472)
T TIGR03250 161 APAIATNNRMVVKPSEKTPLSALYLADILYE----AGLPPQMLQVVTGDPREIADELITNPHVDLVTFTGGVAIGKYIAA 236 (472)
T ss_pred HHHHHcCCEEEEECCCcchHHHHHHHHHHHH----cCCCcccEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHH
Confidence 9999999999999999999999999999987 7 99999999996 5667788888999999999999999999998
Q ss_pred hc-CCCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccChhhHHHHHHHHHHcCce-----
Q 005041 502 ST-KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGVG----- 574 (717)
Q Consensus 502 ~a-~~p~~lElGGk~p~iV~~dADl~~A~~~i~~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~~----- 574 (717)
.+ .+|+++|||||||+||++|||++.|++.+++++|.|+| .|+|++|+|||+++| |+|+++|+++++++.+.
T Consensus 237 ~a~~~~~~lElGGk~p~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~G~p~~~ 315 (472)
T TIGR03250 237 RAGYRRQVLELGGNDPLIVMEDADLDRAADLAVKGSYKNSGQRCTAVKRMLVQESVA-DRFTELLVEKTRAWRYGDPMDP 315 (472)
T ss_pred HhcCCceEEecCCCCeEEECCCCCHHHHHHHHHHHHHHhhCCCCCCCcEEEEeHhHH-HHHHHHHHHHHHhcCCCCCCCC
Confidence 77 48999999999999999999999999999999999987 999999999999999 89999999998876321
Q ss_pred -----------------------------E-ecCccccccc-c-C-----CCCccccccccCceEEEEEeCCHHHHHHHH
Q 005041 575 -----------------------------L-FGGPRASKLL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHI 617 (717)
Q Consensus 575 -----------------------------~-~g~~~~~~~~-p-i-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~a 617 (717)
+ .|+.....|+ | | ++|++++||+||||++|++|+|+||||+++
T Consensus 316 ~~~~gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~~g~~~~PTvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~a 395 (472)
T TIGR03250 316 SVDMGTVIDEAAAILFEARVNEAIAQGARLLLGNVRDGALYAPTVLDRVDPSMTLVREETFGPVSPVIRFCDIDDAIRIS 395 (472)
T ss_pred CCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCcCCEEEcCEEEeCCCCCChHHhCCCcCCeEEEEEeCCHHHHHHHH
Confidence 1 1222211233 5 2 368999999999999999999999999999
Q ss_pred HhcCCCceeEEEecCHHHHHHHHhcCCeeeEEEcCCCCCC-CCCccCCccccccccCcccccccchhhcccEEEEEEec
Q 005041 618 HQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFC-DGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRG 695 (717)
Q Consensus 618 N~~~~GL~a~I~t~d~~~a~~~~~~l~~G~v~iN~~~~~~-~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v~~~ 695 (717)
|+++|||++||||+|.+++.++++++++|+||||+.+... +.+||||.+.||+|. +.+|.+|+++||+.|++.++
T Consensus 396 N~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~---~~g~~~~l~~ft~~k~i~~~ 471 (472)
T TIGR03250 396 NSTAYGLSSGVCTNRLDYITRFIAELQVGTVNVWEVPGYRLELTPFGGIKDSGLGY---KEGVQEAMKSFTNLKTYSLP 471 (472)
T ss_pred hCCCccceEEEEcCCHHHHHHHHHHCCcceEEEcCCCCCCCCCCCCCccccccCCC---CCChHHHHHHhhceEEEEEe
Confidence 9999999999999999999999999999999999876443 458999999999862 23468999999999999875
No 64
>PRK03137 1-pyrroline-5-carboxylate dehydrogenase; Provisional
Probab=100.00 E-value=1.5e-71 Score=631.33 Aligned_cols=398 Identities=19% Similarity=0.231 Sum_probs=336.4
Q ss_pred hHHHHh-cCCcceEEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
Q 005041 268 SIIKVL-EGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAA 346 (717)
Q Consensus 268 ~l~~~~-tg~~iGT~i~a~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~ 346 (717)
...+|. +++.++++..++ .+|+++++++|++||+.|++++.++|.++|++++++|++|.++|++++++|.|++
T Consensus 53 ~~~~P~~t~~~i~~~~~a~------~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~ 126 (514)
T PRK03137 53 VSINPANKSEVVGRVSKAT------KELAEKAMQAALEAFETWKKWSPEDRARILLRAAAIIRRRKHEFSAWLVKEAGKP 126 (514)
T ss_pred EeECCCCCCceEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHcCCC
Confidence 347888 599999999888 8999999999999999999999999999999999999999999999988877654
Q ss_pred HhhchhHHHHHHhhcChhHHHHHHHHHHHHhcccccc--cccccccccCCCceEEEeecceeEEEEEcCC-Cch-hHHHH
Q 005041 347 QEAGYAKSLVSRLALKPGKISSLAKSIRILADMEEPI--GQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQI 422 (717)
Q Consensus 347 ~~~g~~~a~~~~~~~~~~~i~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~ 422 (717)
.. ++ ..|+...++.+++++...+.. +..... ..+...+++++|+|||++|+|| ||. +.+++
T Consensus 127 ~~----~a--------~~ev~~~~~~~~~~a~~~~~~~~~~~~~~---~~g~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 191 (514)
T PRK03137 127 WA----EA--------DADTAEAIDFLEYYARQMLKLADGKPVES---RPGEHNRYFYIPLGVGVVISPWNFPFAIMAGM 191 (514)
T ss_pred HH----HH--------HHHHHHHHHHHHHHHHHHHHhcCCccccC---CCCceEEEEEecCcEEEEECCCccHHHHHHHH
Confidence 32 22 124555666666655433211 111111 1234567889999999999998 686 56799
Q ss_pred HHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHH
Q 005041 423 ASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIK 500 (717)
Q Consensus 423 ~~~ALaaGN~vVlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~ 500 (717)
+++||++||+||+|||+.+|+++..+++++.+ + +|+|++|+|++ +.++++.|..||+|++|+||||+.+|+.|+
T Consensus 192 i~~ALaaGN~VVlKPs~~tp~~a~~l~~~l~~----aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~ 267 (514)
T PRK03137 192 TLAAIVAGNTVLLKPASDTPVIAAKFVEVLEE----AGLPAGVVNFVPGSGSEVGDYLVDHPKTRFITFTGSREVGLRIY 267 (514)
T ss_pred HHHHHHcCCEEEEECCCCCcHHHHHHHHHHHH----hCCCCCcEEEeecCchHHHHHHhcCCCcCEEEEECCcHHHHHHH
Confidence 99999999999999999999999999999987 7 99999999996 566788888999999999999999999998
Q ss_pred hhcC---------CCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccChhhHHHHHHHHHH
Q 005041 501 ESTK---------IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQH 570 (717)
Q Consensus 501 ~~a~---------~p~~lElGGk~p~iV~~dADl~~A~~~i~~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~ 570 (717)
+.+. ||+++|||||||+||++|||+|.|++.+++++|.|+| .|+|++|+|||+++| |+|+++|++++++
T Consensus 268 ~~aa~~~~~~~~l~~v~lElgGk~~~iV~~daDl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~v~-d~f~~~l~~~~~~ 346 (514)
T PRK03137 268 ERAAKVQPGQIWLKRVIAEMGGKDAIVVDEDADLDLAAESIVASAFGFSGQKCSACSRAIVHEDVY-DEVLEKVVELTKE 346 (514)
T ss_pred HHHhcccccccccceEEecCCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCCCccCeEEEEeHHHH-HHHHHHHHHHHHh
Confidence 8763 7999999999999999999999999999999999987 999999999999999 8999999999887
Q ss_pred cCce---------------------------------EecCccc--ccc-c-c-C-----CCCccccccccCceEEEEEe
Q 005041 571 EGVG---------------------------------LFGGPRA--SKL-L-Q-I-----PETRLFHHEYNSMVCTVEIV 607 (717)
Q Consensus 571 ~~~~---------------------------------~~g~~~~--~~~-~-p-i-----~~~~~~~eE~FGPVl~v~~~ 607 (717)
+.+. +.|+... .++ + | | ++|++++||+||||++|++|
T Consensus 347 l~~g~p~~~~~~Gpli~~~~~~~v~~~v~~a~~~~~vl~Gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~ 426 (514)
T PRK03137 347 LTVGNPEDNAYMGPVINQASFDKIMSYIEIGKEEGRLVLGGEGDDSKGYFIQPTIFADVDPKARIMQEEIFGPVVAFIKA 426 (514)
T ss_pred CCCCCCCCccCcCCCCCHHHHHHHHHHHHHHHhCCEEEeCCCcCCCCceEEeeEEEeCCCCCCHHHhCCCCCceEEEEec
Confidence 5321 1233221 133 3 5 2 35889999999999999999
Q ss_pred CCHHHHHHHHHhcCCCceeEEEecCHHHHHHHHhcCCeeeEEEcCCCCCC--CCCccCCccccccccCcccccccchhhc
Q 005041 608 DDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFC--DGARFGLGAEVGISTSRIHARGPVGVEG 685 (717)
Q Consensus 608 ~~~deAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~v~iN~~~~~~--~~~pfG~g~~~G~~~~~~~~~g~~g~~~ 685 (717)
+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+.+... +.+||||.+.||+|. +++|.+|+++
T Consensus 427 ~~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~k~SG~G~---~~gg~~~l~~ 503 (514)
T PRK03137 427 KDFDHALEIANNTEYGLTGAVISNNREHLEKARREFHVGNLYFNRGCTGAIVGYHPFGGFNMSGTDS---KAGGPDYLLL 503 (514)
T ss_pred CCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCCcccccCCc---ccCCHHHHHH
Confidence 99999999999999999999999999999999999999999999865432 457999999999862 2468899999
Q ss_pred ccEEEEEEe
Q 005041 686 LLTTRWILR 694 (717)
Q Consensus 686 ft~~k~v~~ 694 (717)
||+.|+|..
T Consensus 504 ft~~k~v~~ 512 (514)
T PRK03137 504 FLQAKTVSE 512 (514)
T ss_pred hceEEEEEE
Confidence 999999865
No 65
>cd07083 ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like. ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH.
Probab=100.00 E-value=1.8e-71 Score=629.00 Aligned_cols=399 Identities=16% Similarity=0.191 Sum_probs=335.4
Q ss_pred HHHHh-cCCcceEEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
Q 005041 269 IIKVL-EGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQ 347 (717)
Q Consensus 269 l~~~~-tg~~iGT~i~a~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~ 347 (717)
..+|+ +++.++++..++ .+|+++++++|++||+.|+++|.++|.++|++++++|+++.++|+++++.|.|++.
T Consensus 36 ~~~P~~tg~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~ 109 (500)
T cd07083 36 SVSPFAPSEVVGTTAKAD------KAEAEAALEAAWAAFKTWKDWPQEDRARLLLKAADLLRRRRRELIATLTYEVGKNW 109 (500)
T ss_pred eeCCCCCCcEEEEEcCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHhCCCH
Confidence 46777 588899988888 89999999999999999999999999999999999999999999999888776542
Q ss_pred hhchhHHHHHHhhcChhHHHHHHHHHHHHhcccccc-cccccccccCCCceEEEeecceeEEEEEcCC-Cch-hHHHHHH
Q 005041 348 EAGYAKSLVSRLALKPGKISSLAKSIRILADMEEPI-GQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIAS 424 (717)
Q Consensus 348 ~~g~~~a~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~ 424 (717)
. ++ ..|+..+++.++++++..... +...... ...+...+++++|+|||++|+|| ||. +.+++++
T Consensus 110 ~----~a--------~~ev~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~ 176 (500)
T cd07083 110 V----EA--------IDDVAEAIDFIRYYARAALRLRYPAVEVV-PYPGEDNESFYVGLGAGVVISPWNFPVAIFTGMIV 176 (500)
T ss_pred H----HH--------HHHHHHHHHHHHHHHHHHHHhcCcccccC-CCCCceEEEEEeccceEEEEcCCccHHHHHHHHHH
Confidence 1 21 235555666666655433211 2111000 01234457789999999999998 685 5679999
Q ss_pred HHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHhh
Q 005041 425 LAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKES 502 (717)
Q Consensus 425 ~ALaaGN~vVlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~ 502 (717)
+||++||+||+|||+.||+|+.++++++.+ + +|+|++|+|+| +.++++.|..||+||+|+||||+++|+.|++.
T Consensus 177 ~ALaaGN~VVlKPs~~tp~~~~~l~~~~~e----aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~v~~~ 252 (500)
T cd07083 177 APVAVGNTVIAKPAEDAVVVGYKVFEIFHE----AGFPPGVVQFLPGVGEEVGAYLTEHERIRGINFTGSLETGKKIYEA 252 (500)
T ss_pred HHHHcCCeEEEeCCCcchHHHHHHHHHHHH----cCCCCCceEEEeCCCchhHHHHhcCCCcCEEEEECcHHHHHHHHHH
Confidence 999999999999999999999999999987 7 99999999996 56788888899999999999999999999877
Q ss_pred cC---------CCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccChhhHHHHHHHHHHcC
Q 005041 503 TK---------IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEG 572 (717)
Q Consensus 503 a~---------~p~~lElGGk~p~iV~~dADl~~A~~~i~~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~ 572 (717)
+. +|+++|||||||+||++|||+|.|++.+++++|.|+| .|+|++|+|||+++| |+|+++|+++++++.
T Consensus 253 aa~~~~~~~~~~~v~lElgG~~~~iV~~dadl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~ 331 (500)
T cd07083 253 AARLAPGQTWFKRLYVETGGKNAIIVDETADFELVVEGVVVSAFGFQGQKCSAASRLILTQGAY-EPVLERLLKRAERLS 331 (500)
T ss_pred HhhccccccccCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeeEEEcHHHH-HHHHHHHHHHHHcCC
Confidence 52 8999999999999999999999999999999999986 999999999999999 799999999988753
Q ss_pred c---------------------------------e-EecCccc--cc-cc-c-C-----CCCccccccccCceEEEEEeC
Q 005041 573 V---------------------------------G-LFGGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVD 608 (717)
Q Consensus 573 ~---------------------------------~-~~g~~~~--~~-~~-p-i-----~~~~~~~eE~FGPVl~v~~~~ 608 (717)
+ + +.|+... .+ |+ | | ++|++++||+||||++|++|+
T Consensus 332 ~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~g~vl~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~ 411 (500)
T cd07083 332 VGPPEENGTDLGPVIDAEQEAKVLSYIEHGKNEGQLVLGGKRLEGEGYFVAPTVVEEVPPKARIAQEEIFGPVLSVIRYK 411 (500)
T ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCEEEeCCCcCCCCCeEEccEEEeCCCCCChHhhCCCCCceEEEEEeC
Confidence 2 0 1233221 13 33 5 2 358999999999999999999
Q ss_pred --CHHHHHHHHHhcCCCceeEEEecCHHHHHHHHhcCCeeeEEEcCCCCCC--CCCccCCccccccccCcccccccchhh
Q 005041 609 --DVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFC--DGARFGLGAEVGISTSRIHARGPVGVE 684 (717)
Q Consensus 609 --~~deAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~v~iN~~~~~~--~~~pfG~g~~~G~~~~~~~~~g~~g~~ 684 (717)
|+||||+++|+++|||++||||+|.+++.++++++++|+|+||++.... +.+||||.+.||+|. +.+|++|++
T Consensus 412 d~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~PfGG~k~SG~G~---~~~g~~~l~ 488 (500)
T cd07083 412 DDDFAEALEVANSTPYGLTGGVYSRKREHLEEARREFHVGNLYINRKITGALVGVQPFGGFKLSGTNA---KTGGPHYLR 488 (500)
T ss_pred CCCHHHHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCeeEEEECCCCCCCCCCCCCCCccccccCCC---cccCHHHHH
Confidence 9999999999999999999999999999999999999999999876543 457999999999862 235899999
Q ss_pred cccEEEEEEe
Q 005041 685 GLLTTRWILR 694 (717)
Q Consensus 685 ~ft~~k~v~~ 694 (717)
+||+.|++..
T Consensus 489 ~~~~~k~~~~ 498 (500)
T cd07083 489 RFLEMKAVAE 498 (500)
T ss_pred HhhheeEEEE
Confidence 9999999875
No 66
>cd07123 ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17. Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences.
Probab=100.00 E-value=1.1e-71 Score=632.37 Aligned_cols=400 Identities=18% Similarity=0.190 Sum_probs=333.2
Q ss_pred hHHHHhc-CCcceEEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH-CHHHHHHHHHHHHHH
Q 005041 268 SIIKVLE-GKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEA-NESLIKVENEADVAA 345 (717)
Q Consensus 268 ~l~~~~t-g~~iGT~i~a~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~-~~~el~~~~~~d~~~ 345 (717)
.+.+|++ ++.++++..++ .+|+++++++|++||+.|+++|..+|.++|++++++|++ |+++|++++..|+++
T Consensus 49 ~v~~P~~tg~~l~~~~~~~------~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~~ela~~~~~e~Gk 122 (522)
T cd07123 49 KQVMPHDHAHVLATYHYAD------AALVEKAIEAALEARKEWARMPFEDRAAIFLKAADLLSGKYRYELNAATMLGQGK 122 (522)
T ss_pred EEECCCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhhCHHHHHHHHHHhcCC
Confidence 3477884 89999988888 899999999999999999999999999999999999996 899999998877655
Q ss_pred HHhhchhHHHHHHhhcChhHHHHHHHHHHHHhccccc-ccccccccccCCCceEEEeecce-eEEEEEcCC-Cch-hHHH
Q 005041 346 AQEAGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPL-GVLLIVFES-RPD-ALVQ 421 (717)
Q Consensus 346 ~~~~g~~~a~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~Pl-GVV~~I~p~-~P~-~~~~ 421 (717)
+.. ++. ..++...++.+++++...+. .+...+. ...+...+++++|+ |||++|+|| ||. +..+
T Consensus 123 ~~~----~a~-------~~~v~~~~~~~~~~a~~~~~~~~~~~~~--~~~~~~~~~~~~P~~GVv~~I~PwNfP~~~~~~ 189 (522)
T cd07123 123 NVW----QAE-------IDAACELIDFLRFNVKYAEELYAQQPLS--SPAGVWNRLEYRPLEGFVYAVSPFNFTAIGGNL 189 (522)
T ss_pred CHH----HHh-------HHHHHHHHHHHHHHHHHHHHhcCccccC--CCCCceeEEEEecCCceEEEECCcccHHHHHHH
Confidence 421 211 12455566666666543322 1222111 11234567889999 999999998 685 5678
Q ss_pred HHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHH
Q 005041 422 IASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQI 499 (717)
Q Consensus 422 ~~~~ALaaGN~vVlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i 499 (717)
+++||| +||+||+|||++||+++..+++++.+ + ||+|+||+|+| ++++++.|..||+|++|+||||+++|+.|
T Consensus 190 ~~~pal-aGN~VVlKPs~~tp~~~~~l~~~l~~----aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~V~FTGS~~~G~~i 264 (522)
T cd07123 190 AGAPAL-MGNVVLWKPSDTAVLSNYLVYKILEE----AGLPPGVINFVPGDGPVVGDTVLASPHLAGLHFTGSTPTFKSL 264 (522)
T ss_pred HHHHHH-hCCEEEEECCCCCCHHHHHHHHHHHH----cCcCCCcEEEEecCchHHHHHHhcCCCcCEEEEECCHHHHHHH
Confidence 999999 69999999999999999999999987 7 99999999996 55688888899999999999999999999
Q ss_pred HhhcC---C------CEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccChhhHHHHHHHHH
Q 005041 500 KESTK---I------PVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQ 569 (717)
Q Consensus 500 ~~~a~---~------p~~lElGGk~p~iV~~dADl~~A~~~i~~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~ 569 (717)
++.++ + |+++|||||||+||++|||+|.|++.+++|+|.|+| +|+|++|+|||+++| |+|+++|+++++
T Consensus 265 ~~~aa~~l~~~~~~~~v~lElGGkn~~IV~~dAdl~~Aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~ 343 (522)
T cd07123 265 WKQIGENLDRYRTYPRIVGETGGKNFHLVHPSADVDSLVTATVRGAFEYQGQKCSAASRAYVPESLW-PEVKERLLEELK 343 (522)
T ss_pred HHHHHhhcccccccCCEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHH-HHHHHHHHHHHh
Confidence 98773 4 899999999999999999999999999999999987 999999999999999 899999999988
Q ss_pred HcCc-----------------------------------eE-ecCccc--cccc--c-C-----CCCccccccccCceEE
Q 005041 570 HEGV-----------------------------------GL-FGGPRA--SKLL--Q-I-----PETRLFHHEYNSMVCT 603 (717)
Q Consensus 570 ~~~~-----------------------------------~~-~g~~~~--~~~~--p-i-----~~~~~~~eE~FGPVl~ 603 (717)
++.+ ++ .|+... .++| | | ++|++++||+||||++
T Consensus 344 ~l~~G~p~d~~t~~Gpli~~~~~~~v~~~v~~a~~~~Ga~vl~gg~~~~~~g~f~~PTvl~~v~~~~~i~~eEiFGPVl~ 423 (522)
T cd07123 344 EIKMGDPDDFSNFMGAVIDEKAFDRIKGYIDHAKSDPEAEIIAGGKCDDSVGYFVEPTVIETTDPKHKLMTEEIFGPVLT 423 (522)
T ss_pred hCccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEeCCCcCCCCCceEcCEEEeCCCCCChhhhcCCCCCeEE
Confidence 7521 11 133221 2333 6 3 3689999999999999
Q ss_pred EEEeC--CHHHHHHHHHhcC-CCceeEEEecCHHHHHHHHhcC--CeeeEEEcCCCCC--CCCCccCCccccccccCccc
Q 005041 604 VEIVD--DVRAAIDHIHQHG-SAHTDCIVAEDQKVAETFLCQV--DSAAVFHNASTRF--CDGARFGLGAEVGISTSRIH 676 (717)
Q Consensus 604 v~~~~--~~deAi~~aN~~~-~GL~a~I~t~d~~~a~~~~~~l--~~G~v~iN~~~~~--~~~~pfG~g~~~G~~~~~~~ 676 (717)
|++|+ |+||||+++|++. |||++||||+|.+++.++++++ ++|.||||+.... .+.+||||.+.||+++ +
T Consensus 424 V~~~~~~~~~eai~~aN~~~~~gL~a~Vft~d~~~~~~~~~~l~~~~G~v~iN~~~~~~~~~~~PfGG~k~SG~gg---~ 500 (522)
T cd07123 424 VYVYPDSDFEETLELVDTTSPYALTGAIFAQDRKAIREATDALRNAAGNFYINDKPTGAVVGQQPFGGARASGTND---K 500 (522)
T ss_pred EEEeCCCCHHHHHHHHhCCCCcCceEEEEeCCHHHHHHHHHhhhhcCcEEEECCCCCCCCCCCCCCCcchhcCCCc---c
Confidence 99998 4799999999995 9999999999999999999996 5999999987643 2468999999999852 3
Q ss_pred ccccchhhcccEEEEEEec
Q 005041 677 ARGPVGVEGLLTTRWILRG 695 (717)
Q Consensus 677 ~~g~~g~~~ft~~k~v~~~ 695 (717)
++|++++++||+.|++...
T Consensus 501 ~~g~~~l~~~~~~k~~~~~ 519 (522)
T cd07123 501 AGSPLNLLRWVSPRTIKET 519 (522)
T ss_pred cCCHHHHHHhcceEEEEEe
Confidence 5689999999999998764
No 67
>cd07098 ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and 22A1-like. Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation.
Probab=100.00 E-value=1.4e-71 Score=626.72 Aligned_cols=403 Identities=20% Similarity=0.222 Sum_probs=336.6
Q ss_pred HHhcCCcceEEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhhc
Q 005041 271 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAG 350 (717)
Q Consensus 271 ~~~tg~~iGT~i~a~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~g 350 (717)
+|.+|+.++++..++ .+|+++++++|++||+.|+++|.++|.++|++++++|++++++|+++++.|+|++.
T Consensus 2 ~P~tg~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~--- 72 (465)
T cd07098 2 DPATGQHLGSVPADT------PEDVDEAIAAARAAQREWAKTSFAERRKVLRSLLKYILENQEEICRVACRDTGKTM--- 72 (465)
T ss_pred CCCCCCeeEEeeCCC------HHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH---
Confidence 577899999998888 89999999999999999999999999999999999999999999999888776542
Q ss_pred hhHHHHHHhhcChhHHHHHHHHHHHHhccccc-cc-ccccccccCCCceEEEeecceeEEEEEcCC-Cch-hHHHHHHHH
Q 005041 351 YAKSLVSRLALKPGKISSLAKSIRILADMEEP-IG-QILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 426 (717)
Q Consensus 351 ~~~a~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~A 426 (717)
.++.. .|+...++.+++++...+. .. ...+......+...+++++|+|||++|+|| +|. ..++++++|
T Consensus 73 -~~a~~-------~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~n~P~~~~~~~~~~A 144 (465)
T cd07098 73 -VDASL-------GEILVTCEKIRWTLKHGEKALRPESRPGGLLMFYKRARVEYEPLGVVGAIVSWNYPFHNLLGPIIAA 144 (465)
T ss_pred -HHHHH-------HHHHHHHHHHHHHHHHHHHHhCCcccCCccccCCceeEEEEecceeEEEEcccCcHHHHHHHHHHHH
Confidence 22221 2444455555554432111 11 111100001123456789999999999998 685 567899999
Q ss_pred HHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecCCChhhhhhcCCCCccEEEeecCHHHHHHHHhhc--
Q 005041 427 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST-- 503 (717)
Q Consensus 427 LaaGN~vVlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a-- 503 (717)
|++||+||+|||+++|+|+..+++++.++|+++ +|+|++|+|+|..++++.|..||+|++|+||||+.+|+.|++.+
T Consensus 145 LaaGN~VIlKps~~~p~~~~~~~~~~~~~l~~aGlP~gvv~~v~g~~~~~~~L~~~~~v~~V~ftGs~~~g~~v~~~a~~ 224 (465)
T cd07098 145 LFAGNAIVVKVSEQVAWSSGFFLSIIRECLAACGHDPDLVQLVTCLPETAEALTSHPVIDHITFIGSPPVGKKVMAAAAE 224 (465)
T ss_pred HHcCCEEEEECCCcCcHHHHHHHHHHHHHHHhcCCCCCeEEEEECCHHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHh
Confidence 999999999999999999999999999988889 99999999997546788888999999999999999999998876
Q ss_pred -CCCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccChhhHHHHHHHHHHcCc--------
Q 005041 504 -KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV-------- 573 (717)
Q Consensus 504 -~~p~~lElGGk~p~iV~~dADl~~A~~~i~~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~-------- 573 (717)
.+|+++|||||||+||++|||+|.|++.+++++|.|+| .|+|++|+|||+++| |+|+++|+++++++.+
T Consensus 225 ~~~~~~lelgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~L~~~~~~l~~G~p~~~~~ 303 (465)
T cd07098 225 SLTPVVLELGGKDPAIVLDDADLDQIASIIMRGTFQSSGQNCIGIERVIVHEKIY-DKLLEILTDRVQALRQGPPLDGDV 303 (465)
T ss_pred cCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEcHHHH-HHHHHHHHHHHHhcCCCCCCCCCC
Confidence 49999999999999999999999999999999999987 999999999999999 8999999998877521
Q ss_pred --------------------------eE-ecCccc------ccc-c-c-C-----CCCccccccccCceEEEEEeCCHHH
Q 005041 574 --------------------------GL-FGGPRA------SKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRA 612 (717)
Q Consensus 574 --------------------------~~-~g~~~~------~~~-~-p-i-----~~~~~~~eE~FGPVl~v~~~~~~de 612 (717)
++ .|+... .++ + | | ++|++++||+||||++|++|+|+||
T Consensus 304 ~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~e 383 (465)
T cd07098 304 DVGAMISPARFDRLEELVADAVEKGARLLAGGKRYPHPEYPQGHYFPPTLLVDVTPDMKIAQEEVFGPVMVVMKASDDEE 383 (465)
T ss_pred CcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCcCcCCCCcEEcCEEEeCCCCCCHHHhCCCcCCeEEEEEeCCHHH
Confidence 12 232211 122 3 5 2 3578999999999999999999999
Q ss_pred HHHHHHhcCCCceeEEEecCHHHHHHHHhcCCeeeEEEcCCCCC--CCCCccCCccccccccCcccccccchhhcccEEE
Q 005041 613 AIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRF--CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTR 690 (717)
Q Consensus 613 Ai~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~v~iN~~~~~--~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k 690 (717)
||+++|+++|||++||||+|.+++.++++++++|.|+||+.... .+..||||.+.||+| +++|++|+++||+.|
T Consensus 384 ai~~~n~~~~gLsa~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~PfgG~k~SG~G----~~~g~~~~~~~~~~k 459 (465)
T cd07098 384 AVEIANSTEYGLGASVFGKDIKRARRIASQLETGMVAINDFGVNYYVQQLPFGGVKGSGFG----RFAGEEGLRGLCNPK 459 (465)
T ss_pred HHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCcCccccccCC----ccChHHHHHHhheeE
Confidence 99999999999999999999999999999999999999986532 357899999999986 356899999999999
Q ss_pred EEEec
Q 005041 691 WILRG 695 (717)
Q Consensus 691 ~v~~~ 695 (717)
++.++
T Consensus 460 ~~~~~ 464 (465)
T cd07098 460 SVTED 464 (465)
T ss_pred EEEEe
Confidence 99763
No 68
>TIGR01236 D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehydrogenase, group 1. This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate.
Probab=100.00 E-value=1.1e-71 Score=631.92 Aligned_cols=400 Identities=19% Similarity=0.197 Sum_probs=334.6
Q ss_pred HHHHhc-CCcceEEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH-HCHHHHHHHHHHHHHHH
Q 005041 269 IIKVLE-GKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALE-ANESLIKVENEADVAAA 346 (717)
Q Consensus 269 l~~~~t-g~~iGT~i~a~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~-~~~~el~~~~~~d~~~~ 346 (717)
+.+|.+ ++.++++..++ .+|+++++++|++||+.|+++|..+|.++|++++++|+ +++++|+++++.|+||+
T Consensus 50 ~~nP~t~g~~i~~~~~~~------~~~v~~av~~A~~a~~~W~~~~~~~R~~~L~k~a~~l~~~~~~~la~~~~~e~GK~ 123 (533)
T TIGR01236 50 QVQPHNHQAVLAKATNAT------EEDAAKAVEAALDAKKDWSALPFYDRAAIFLKAADLLSGPYREEILAATMLGQSKN 123 (533)
T ss_pred EECCCCCCeEEEEEeCCC------HHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhhcHHHHHHHHHHHcCCc
Confidence 478886 78899998888 89999999999999999999999999999999999999 59999999988777654
Q ss_pred HhhchhHHHHHHhhcChhHHHHHHHHHHHHhcccccc-cccccccccCCCceEEEeecce-eEEEEEcCC-Cch-hHHHH
Q 005041 347 QEAGYAKSLVSRLALKPGKISSLAKSIRILADMEEPI-GQILKRTELADGLILEKTSCPL-GVLLIVFES-RPD-ALVQI 422 (717)
Q Consensus 347 ~~~g~~~a~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Pl-GVV~~I~p~-~P~-~~~~~ 422 (717)
.. ++. .+++...++.+++++...+.. +...+. ...+...+++|+|+ |||++|+|| ||. +..++
T Consensus 124 ~~----~a~-------~e~v~~~i~~~~~~a~~a~~~~~~~~~~--~~~~~~~~~~~~P~~GVv~~I~PwN~P~~~~~~~ 190 (533)
T TIGR01236 124 VY----QAE-------IDAVAELIDFFRFNVKYARELYEQQPSE--SAPGEWNRTDYRPLEGFVYAISPFNFTAIAGNLP 190 (533)
T ss_pred HH----HHh-------HhHHHHHHHHHHHHHHHHHHhcCccccC--CCCCceeEEEEecCCCEEEEEeCCchHHHHHHHH
Confidence 31 221 123556667777766443322 222111 01234467889999 999999998 685 45689
Q ss_pred HHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHH
Q 005041 423 ASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIK 500 (717)
Q Consensus 423 ~~~ALaaGN~vVlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~ 500 (717)
+++|| +||+||+|||++||+++.++++++.+ + ||+|+||+|+| +.++++.|..||+|++|+||||+++|+.|+
T Consensus 191 ~a~AL-aGN~VVlKPs~~tp~~~~~l~~~~~~----aGlP~gvv~vv~g~~~~~g~~Lv~~p~v~~V~FTGS~~~G~~i~ 265 (533)
T TIGR01236 191 GAPAL-MGNTVIWKPSITATLSNYLTMRILEE----AGLPPGVINFVPGDGFAVSDVVLADPRLAGIHFTGSTATFKHLW 265 (533)
T ss_pred HHHHH-hCCeEEEECCCcCCHHHHHHHHHHHh----cCCCCCcEEEEecCcHHHHHHHhcCCCcCEEEEECCHHHHHHHH
Confidence 99999 89999999999999999999999987 7 99999999996 566888888999999999999999999998
Q ss_pred hhcC---C------CEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccChhhHHHHHHHHHH
Q 005041 501 ESTK---I------PVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQH 570 (717)
Q Consensus 501 ~~a~---~------p~~lElGGk~p~iV~~dADl~~A~~~i~~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~ 570 (717)
+.+. + ++++|||||||+||++|||+|.|++.+++|+|.|+| +|+|++|+|||++|| |+|+++|++++++
T Consensus 266 ~~aa~~l~~~~~~~~v~lElGGknp~IV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~ 344 (533)
T TIGR01236 266 KWVASNLDRYHNFPRIVGETGGKDFHVVHPSADIDHAVTATIRGAFEYQGQKCSAASRLYVPHSVW-PRFKDELLAELAE 344 (533)
T ss_pred HHHHhhccccccCCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhhCCCCCcCCeeEEEchhHH-HHHHHHHHHHHhc
Confidence 8763 4 499999999999999999999999999999999987 999999999999999 8999999999887
Q ss_pred cCc------------------------------------eE-ecCccc--cccc--c-C-----CCCccccccccCceEE
Q 005041 571 EGV------------------------------------GL-FGGPRA--SKLL--Q-I-----PETRLFHHEYNSMVCT 603 (717)
Q Consensus 571 ~~~------------------------------------~~-~g~~~~--~~~~--p-i-----~~~~~~~eE~FGPVl~ 603 (717)
+.+ ++ +|+... .++| | | ++|++++||+||||++
T Consensus 345 l~~G~p~d~~t~~Gpli~~~~~~~v~~~i~~a~~~Ga~a~vl~GG~~~~~~G~~~~PTvl~~~~~d~~i~~eE~FGPVl~ 424 (533)
T TIGR01236 345 VKVGDPDDFSNFMGAVIDERSFVKNVKYIERAKGDPAELTILYGGKYDDSEGYFVEPTVILSKDPTDPLMVEEIFGPVLT 424 (533)
T ss_pred CCcCCCCCCCCcccccCCHHHHHHHHHHHHHHHhcCCceEEEeCCCcCCCCCeEEeeEEEecCCCCChhhcccCCCCeEE
Confidence 521 11 133221 1333 5 2 3589999999999999
Q ss_pred EEEeCC--HHHHHHHH-HhcCCCceeEEEecCHHHHHHHHhcCC--eeeEEEcCCCCCC--CCCccCCccccccccCccc
Q 005041 604 VEIVDD--VRAAIDHI-HQHGSAHTDCIVAEDQKVAETFLCQVD--SAAVFHNASTRFC--DGARFGLGAEVGISTSRIH 676 (717)
Q Consensus 604 v~~~~~--~deAi~~a-N~~~~GL~a~I~t~d~~~a~~~~~~l~--~G~v~iN~~~~~~--~~~pfG~g~~~G~~~~~~~ 676 (717)
|++|+| +||||+++ |+++|||++||||+|.+++.+++++++ +|+|+||+.+... +..||||.+.||+|+ +
T Consensus 425 v~~~~~~~~~eai~~~~n~~~~gL~a~Vft~d~~~a~~~~~~l~~~~G~v~IN~~~~~~~~~~~PfGG~k~SG~G~---~ 501 (533)
T TIGR01236 425 VYVYPDDKYKEILDVVDSTSRYGLTGAVFAKDRQAILEADKRLRFAAGNFYINDKPTGAVVGQQPFGGARGSGTND---K 501 (533)
T ss_pred EEEeCCCCHHHHHHHHhcCCCcCceEEEEeCCHHHHHHHHHHhhhcCcEEEECCCCCCCCCCCCCCCCcccccCCc---c
Confidence 999998 59999999 899999999999999999999999977 9999999865433 568999999999862 3
Q ss_pred ccccchhhcccEEEEEEecC
Q 005041 677 ARGPVGVEGLLTTRWILRGN 696 (717)
Q Consensus 677 ~~g~~g~~~ft~~k~v~~~~ 696 (717)
++|.+|+++|++.|++....
T Consensus 502 ~~g~~~l~~f~~~k~v~~~~ 521 (533)
T TIGR01236 502 AGGPLNLLRWTSARSIKETF 521 (533)
T ss_pred cCCHHHHHHhcceEEEEEEc
Confidence 56899999999999988754
No 69
>cd07125 ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA. The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes.
Probab=100.00 E-value=1.4e-71 Score=631.97 Aligned_cols=423 Identities=19% Similarity=0.190 Sum_probs=348.8
Q ss_pred HHHHHHHHHcCCc--EEEEeCCCc-----chHHHHhc-CCcceEEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHH
Q 005041 245 VNAAYCAACAGIP--VVITSGFAM-----DSIIKVLE-GKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQD 316 (717)
Q Consensus 245 v~aa~~a~~~gi~--v~I~~g~~~-----~~l~~~~t-g~~iGT~i~a~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~ 316 (717)
++.+++.++.+.+ +.+++|... -.+.+|.+ ++.++++..++ .+|+++++++|++||+.|+.++.++
T Consensus 19 ~~~~~~~~~~~~~~~~p~i~g~~~~~~~~~~v~~P~t~g~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~ 92 (518)
T cd07125 19 LADALKAFDEKEWEAIPIINGEETETGEGAPVIDPADHERTIGEVSLAD------AEDVDAALAIAAAAFAGWSATPVEE 92 (518)
T ss_pred HHHHHHHhhhcCcccCceECCEEeeCCCeEEEECCCCCCceEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHH
Confidence 4556666665533 445554421 23478999 99999999888 8999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhhchhHHHHHHhhcChhHHHHHHHHHHHHhccccc-cccc-ccccccCC
Q 005041 317 RRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQI-LKRTELAD 394 (717)
Q Consensus 317 R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~g~~~a~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~ 394 (717)
|.++|++++++|++++++|++++++|++++.. ++. .|+..+++.+++++...+. .+.. .+. +.
T Consensus 93 R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~----~a~--------~ev~~~i~~l~~~~~~~~~~~~~~~~~~---~~ 157 (518)
T cd07125 93 RAEILEKAADLLEANRGELIALAAAEAGKTLA----DAD--------AEVREAIDFCRYYAAQARELFSDPELPG---PT 157 (518)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH----HHH--------HHHHHHHHHHHHHHHHHHHhcCCccccC---CC
Confidence 99999999999999999999999888766532 221 2444455555555432221 1111 111 12
Q ss_pred CceEEEeecceeEEEEEcCC-Cch-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-
Q 005041 395 GLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS- 470 (717)
Q Consensus 395 ~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~- 470 (717)
+...+++++|+|||++|+|| ||. +.++++++||++||+||+|||+.||+|+.++++++.+ + +|+|++|+|++
T Consensus 158 g~~~~~~~~P~GVV~~I~p~N~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~ll~e----aGlP~gvv~vv~g~ 233 (518)
T cd07125 158 GELNGLELHGRGVFVCISPWNFPLAIFTGQIAAALAAGNTVIAKPAEQTPLIAARAVELLHE----AGVPRDVLQLVPGD 233 (518)
T ss_pred CceeEEEEecccEEEEECCcchHHHHHHHHHHHHHHcCCEEEEeCCCcCcHHHHHHHHHHHH----cCCCCCcEEEEecC
Confidence 34557889999999999998 786 5679999999999999999999999999999999987 7 99999999996
Q ss_pred CChhhhhhcCCCCccEEEeecCHHHHHHHHhhc------CCCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cc
Q 005041 471 REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST------KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-AC 543 (717)
Q Consensus 471 ~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a------~~p~~lElGGk~p~iV~~dADl~~A~~~i~~~~~~n~g-~C 543 (717)
++++++.|..||+||+|+||||+++|+.|++.+ .+|+++|||||||+||++|||+|+|++.+++|+|.|+| +|
T Consensus 234 ~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~~~v~lElgGk~p~iV~~dADl~~Aa~~iv~g~f~nsGQ~C 313 (518)
T cd07125 234 GEEIGEALVAHPRIDGVIFTGSTETAKLINRALAERDGPILPLIAETGGKNAMIVDSTALPEQAVKDVVQSAFGSAGQRC 313 (518)
T ss_pred chhhHHHHhcCCCcCEEEEECCHHHHHHHHHHhhhccCCCceEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCC
Confidence 455788888999999999999999999998865 37999999999999999999999999999999999987 99
Q ss_pred cccceEEEcCcccChhhHHHHHHHHHHcCce---------------------------------E-ecCccc--cc-cc-
Q 005041 544 NAMETLLVHKDLACNGALNELVVELQHEGVG---------------------------------L-FGGPRA--SK-LL- 585 (717)
Q Consensus 544 ~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~~---------------------------------~-~g~~~~--~~-~~- 585 (717)
+|++|||||+++| |+|+++|+++++++.+. + .|+... .+ |+
T Consensus 314 ~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~~~vl~gg~~~~~~g~~~~ 392 (518)
T cd07125 314 SALRLLYLQEEIA-ERFIEMLKGAMASLKVGDPWDLSTDVGPLIDKPAGKLLRAHTELMRGEAWLIAPAPLDDGNGYFVA 392 (518)
T ss_pred CCCeEEEEcchhH-HHHHHHHHHHHhcCCccCCCCCCCCcCCCcCHHHHHHHHHHHHHHHhCCEEEeCCCcCCCCCeEEc
Confidence 9999999999999 89999999999875321 1 122211 12 23
Q ss_pred c-C---CCCccccccccCceEEEEEeC--CHHHHHHHHHhcCCCceeEEEecCHHHHHHHHhcCCeeeEEEcCCCCCC--
Q 005041 586 Q-I---PETRLFHHEYNSMVCTVEIVD--DVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFC-- 657 (717)
Q Consensus 586 p-i---~~~~~~~eE~FGPVl~v~~~~--~~deAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~v~iN~~~~~~-- 657 (717)
| | .+|++++||+||||++|++|+ |+||||+++|+++|||++||||+|.+++.++++++++|.|+||+++...
T Consensus 393 Ptvl~~v~~~i~~eE~FgPVl~v~~~~~~~~deAi~~~n~~~~gLta~Vft~d~~~~~~~~~~l~~G~V~IN~~~~~~~~ 472 (518)
T cd07125 393 PGIIEIVGIFDLTTEVFGPILHVIRFKAEDLDEAIEDINATGYGLTLGIHSRDEREIEYWRERVEAGNLYINRNITGAIV 472 (518)
T ss_pred cEEEeecCChHhhCcccCCeEEEEEeCCCCHHHHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCcCeEEECCCCCCCCC
Confidence 5 3 268999999999999999999 9999999999999999999999999999999999999999999876532
Q ss_pred CCCccCCccccccccCcccccccchhhcccEEEEEEecC
Q 005041 658 DGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGN 696 (717)
Q Consensus 658 ~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v~~~~ 696 (717)
+..||||.+.||+|. +.+|++|+++||+.|+++++.
T Consensus 473 ~~~PfGG~~~SG~G~---~~gg~~~~~~ft~~k~i~~~~ 508 (518)
T cd07125 473 GRQPFGGWGLSGTGP---KAGGPNYLLRFGNEKTVSLNT 508 (518)
T ss_pred CCCCCCCcccccCCc---ccccHHHHHHhcceEEEEEEc
Confidence 468999999999862 235799999999999998854
No 70
>PRK09847 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional
Probab=100.00 E-value=8.4e-72 Score=629.79 Aligned_cols=398 Identities=18% Similarity=0.183 Sum_probs=339.0
Q ss_pred HHHHhcCCcceEEEecCCcccccHhhHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
Q 005041 269 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSR--RLQALQSQDRRKILLDVADALEANESLIKVENEADVAAA 346 (717)
Q Consensus 269 l~~~~tg~~iGT~i~a~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~ 346 (717)
..+|.+++.++++..++ .+|+++++++|++||+ .|+++|.++|.++|++++++|++|+++|++++++|+|++
T Consensus 39 ~~nP~tg~~i~~v~~~~------~~dv~~av~aA~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~ 112 (494)
T PRK09847 39 TVDPVTQAPLAKIARGK------SVDIDRAVSAARGVFERGDWSLSSPAKRKAVLNKLADLMEAHAEELALLETLDTGKP 112 (494)
T ss_pred eECCCCCCEEEEEeCCC------HHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCC
Confidence 36788999999998888 8999999999999997 599999999999999999999999999999988777654
Q ss_pred HhhchhHHHHHHhhcChhHHHHHHHHHHHHhcccccc-cccccccccCCCceEEEeecceeEEEEEcCC-Cch-hHHHHH
Q 005041 347 QEAGYAKSLVSRLALKPGKISSLAKSIRILADMEEPI-GQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIA 423 (717)
Q Consensus 347 ~~~g~~~a~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~ 423 (717)
.. ++. ..|+..+++.+++++...+.. ++..+. ..+...+++|+|+|||++|+|| ||. ++++++
T Consensus 113 ~~----~~~-------~~ev~~~~~~l~~~a~~~~~~~g~~~~~---~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 178 (494)
T PRK09847 113 IR----HSL-------RDDIPGAARAIRWYAEAIDKVYGEVATT---SSHELAMIVREPVGVIAAIVPWNFPLLLTCWKL 178 (494)
T ss_pred HH----HHH-------HHHHHHHHHHHHHHHHHHHHhcCccccC---CCCceeEEEecceeEEEEECCCccHHHHHHHHH
Confidence 21 111 125666677777766544322 332221 1233457889999999999998 796 567999
Q ss_pred HHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHh
Q 005041 424 SLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKE 501 (717)
Q Consensus 424 ~~ALaaGN~vVlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~ 501 (717)
+|||++||+||+|||+.+|.++..+++++.+ + +|+|++|+|+| +.+.++.|..||++|+|+||||+.+|+.|++
T Consensus 179 ~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~----aGlP~g~v~~v~g~~~~~~~~L~~~~~vd~v~fTGs~~~g~~v~~ 254 (494)
T PRK09847 179 GPALAAGNSVILKPSEKSPLSAIRLAGLAKE----AGLPDGVLNVVTGFGHEAGQALSRHNDIDAIAFTGSTRTGKQLLK 254 (494)
T ss_pred HHHHHcCCEEEEeCCCCChHHHHHHHHHHHH----cCcCcCcEEEEeCCChhHHHHHhcCCCCCEEEEECCHHHHHHHHH
Confidence 9999999999999999999999999999986 7 99999999996 5667777888999999999999999999988
Q ss_pred hc----CCCEEEecCCcceEEEcCCC-CHHHHHHHHHhhccCCCc-cccccceEEEcCcccChhhHHHHHHHHHHcCc--
Q 005041 502 ST----KIPVLGHADGICHVYVDKSA-NLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV-- 573 (717)
Q Consensus 502 ~a----~~p~~lElGGk~p~iV~~dA-Dl~~A~~~i~~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~-- 573 (717)
.+ .+|+++|||||||+||++|+ |+|.|++.+++++|.|+| .|+|++|||||+++| |+|+++|+++++++.+
T Consensus 255 ~aa~~~~~~~~lElGGk~~~iV~~daaDl~~Aa~~i~~~~~~~aGQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~g~ 333 (494)
T PRK09847 255 DAGDSNMKRVWLEAGGKSANIVFADCPDLQQAASATAAGIFYNQGQVCIAGTRLLLEESIA-DEFLALLKQQAQNWQPGH 333 (494)
T ss_pred HhhhhCCCeEEEecCCCCeeEEcCCccCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHH-HHHHHHHHHHHHhcCCCC
Confidence 65 38999999999999999997 999999999999999987 999999999999999 8999999999987621
Q ss_pred -------------------------------eE-ecCccc--cccc-c-C-----CCCccccccccCceEEEEEeCCHHH
Q 005041 574 -------------------------------GL-FGGPRA--SKLL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRA 612 (717)
Q Consensus 574 -------------------------------~~-~g~~~~--~~~~-p-i-----~~~~~~~eE~FGPVl~v~~~~~~de 612 (717)
++ .|+... ..++ | | +++++++||+||||++|++|+|+||
T Consensus 334 p~~~~~~~gpli~~~~~~~v~~~v~~a~~~G~i~~gg~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~e 413 (494)
T PRK09847 334 PLDPATTMGTLIDCAHADSVHSFIREGESKGQLLLDGRNAGLAAAIGPTIFVDVDPNASLSREEIFGPVLVVTRFTSEEQ 413 (494)
T ss_pred CCCCCCcCCCCcCHHHHHHHHHHHHHHHHCCeEEECCccCCCCceEeeEEEeCCCCCChHHhCcCcCceEEEEecCCHHH
Confidence 11 233221 1233 5 2 3588999999999999999999999
Q ss_pred HHHHHHhcCCCceeEEEecCHHHHHHHHhcCCeeeEEEcCCCCCCCCCccCCccccccccCcccccccchhhcccEEEEE
Q 005041 613 AIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWI 692 (717)
Q Consensus 613 Ai~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v 692 (717)
||+++|+++|||++||||+|.+++.++++++++|+|+||+.+......||||.+.||+| +++|.+|+++||+.|+|
T Consensus 414 ai~~~n~~~~gLsa~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G----~~~g~~~l~~ft~~k~v 489 (494)
T PRK09847 414 ALQLANDSQYGLGAAVWTRDLSRAHRMSRRLKAGSVFVNNYNDGDMTVPFGGYKQSGNG----RDKSLHALEKFTELKTI 489 (494)
T ss_pred HHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCCcccccC----ccchHHHHHHhhceEEE
Confidence 99999999999999999999999999999999999999997766677899999999986 35699999999999999
Q ss_pred Eec
Q 005041 693 LRG 695 (717)
Q Consensus 693 ~~~ 695 (717)
.+.
T Consensus 490 ~~~ 492 (494)
T PRK09847 490 WIS 492 (494)
T ss_pred EEe
Confidence 764
No 71
>cd07088 ALDH_LactADH-AldA Escherichia coli lactaldehyde dehydrogenase AldA-like. Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD.
Probab=100.00 E-value=1.4e-71 Score=627.57 Aligned_cols=396 Identities=18% Similarity=0.222 Sum_probs=336.8
Q ss_pred HHHHhcCCcceEEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHh
Q 005041 269 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 348 (717)
Q Consensus 269 l~~~~tg~~iGT~i~a~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~ 348 (717)
+++|.+++.++++..++ .+|+++++++|++||+.|+++|.++|.++|++++++|++|.++|++++++|.+++..
T Consensus 17 ~~~P~t~~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~ 90 (468)
T cd07088 17 VLNPATGEVVATVPAAT------AEDADRAVDAAEAAQKAWERLPAIERAAYLRKLADLIRENADELAKLIVEEQGKTLS 90 (468)
T ss_pred eECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHH
Confidence 35678899999998888 899999999999999999999999999999999999999999999998877655432
Q ss_pred hchhHHHHHHhhcChhHHHHHHHHHHHHhccccc-ccccccccccCCCceEEEeecceeEEEEEcCC-Cch-hHHHHHHH
Q 005041 349 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 425 (717)
Q Consensus 349 ~g~~~a~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ 425 (717)
++ ..++..+++.+++++...+. .+...+.. ..+...+.+++|+|||++|+|| ||. +.++++++
T Consensus 91 ----~a--------~~ev~~~~~~l~~~~~~a~~~~~~~~~~~--~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ 156 (468)
T cd07088 91 ----LA--------RVEVEFTADYIDYMAEWARRIEGEIIPSD--RPNENIFIFKVPIGVVAGILPWNFPFFLIARKLAP 156 (468)
T ss_pred ----HH--------HHHHHHHHHHHHHHHHHHHHhCCccccCc--cccceeEEEEecceeEEEEccCchHHHHHHHHHHH
Confidence 22 12455566666665543322 22222211 1133567889999999999998 686 55789999
Q ss_pred HHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHhhc
Q 005041 426 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST 503 (717)
Q Consensus 426 ALaaGN~vVlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a 503 (717)
||++||+||+|||+.+|+|+..+++++++ + +|+|++|+|++ ++++++.|..||++|+|+||||+++|+.|++.+
T Consensus 157 AL~aGN~VVlKps~~~p~~~~~l~~~~~~----aglP~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~a 232 (468)
T cd07088 157 ALVTGNTIVIKPSEETPLNALEFAELVDE----AGLPAGVLNIVTGRGSVVGDALVAHPKVGMISLTGSTEAGQKIMEAA 232 (468)
T ss_pred HHHcCCEEEEECCCcchHHHHHHHHHHHH----cCcCccceEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHH
Confidence 99999999999999999999999999987 7 99999999996 455778888899999999999999999998876
Q ss_pred ---CCCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccChhhHHHHHHHHHHcCc------
Q 005041 504 ---KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------ 573 (717)
Q Consensus 504 ---~~p~~lElGGk~p~iV~~dADl~~A~~~i~~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~------ 573 (717)
.+|+++|||||||+||++|||+|.|++.+++|+|.|+| +|+|++|||||+++| |+|+++|+++++++++
T Consensus 233 a~~~~~~~lelGG~~~~iV~~dadl~~aa~~iv~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~g~p~~~ 311 (468)
T cd07088 233 AENITKVSLELGGKAPAIVMKDADLDLAVKAIVDSRIINCGQVCTCAERVYVHEDIY-DEFMEKLVEKMKAVKVGDPFDA 311 (468)
T ss_pred HhcCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHhcccCcCCcCCeEEEEcHHHH-HHHHHHHHHHHHhcCCCCCCCC
Confidence 48999999999999999999999999999999999987 999999999999999 8999999999887532
Q ss_pred ----------------------------eE-ecCccc---cc-cc-c-C-----CCCccccccccCceEEEEEeCCHHHH
Q 005041 574 ----------------------------GL-FGGPRA---SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAA 613 (717)
Q Consensus 574 ----------------------------~~-~g~~~~---~~-~~-p-i-----~~~~~~~eE~FGPVl~v~~~~~~deA 613 (717)
++ +|+... .+ |+ | | ++|++++||+||||++|++|+|+|||
T Consensus 312 ~~~~gpli~~~~~~~~~~~i~~a~~~ga~vl~gg~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~ea 391 (468)
T cd07088 312 ATDMGPLVNEAALDKVEEMVERAVEAGATLLTGGKRPEGEKGYFYEPTVLTNVRQDMEIVQEEIFGPVLPVVKFSSLDEA 391 (468)
T ss_pred CCccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCceeEcCEEEecCCCCCchhhCCCcCCeEEEEecCCHHHH
Confidence 11 233221 23 33 5 2 35899999999999999999999999
Q ss_pred HHHHHhcCCCceeEEEecCHHHHHHHHhcCCeeeEEEcCCCCCCCCCccCCccccccccCcccccccchhhcccEEEEEE
Q 005041 614 IDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 693 (717)
Q Consensus 614 i~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v~ 693 (717)
|+++|+++|||++||||+|.++++++++++++|.|+||++.......||||.+.||+| +++|++|+++||+.|+|.
T Consensus 392 i~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~k~SG~G----~~~g~~~l~~~t~~k~v~ 467 (468)
T cd07088 392 IELANDSEYGLTSYIYTENLNTAMRATNELEFGETYINRENFEAMQGFHAGWKKSGLG----GADGKHGLEEYLQTKVVY 467 (468)
T ss_pred HHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccccCC----cCchHHHHHHHhceeEEe
Confidence 9999999999999999999999999999999999999998766666799999999986 256999999999999985
No 72
>cd07138 ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric acid dehydrogenase-like. The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD.
Probab=100.00 E-value=1.5e-71 Score=626.12 Aligned_cols=392 Identities=20% Similarity=0.195 Sum_probs=331.9
Q ss_pred HHHHhcCCcceEEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHh
Q 005041 269 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 348 (717)
Q Consensus 269 l~~~~tg~~iGT~i~a~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~ 348 (717)
..+|.+++.++++..++ .+|+++++++|++||+.|+++|.++|.++|++++++|++|+++|++++++|+|++..
T Consensus 18 ~~~P~~~~~~~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ 91 (466)
T cd07138 18 VINPATEEVIGTVPLGT------AADVDRAVAAARRAFPAWSATSVEERAALLERIAEAYEARADELAQAITLEMGAPIT 91 (466)
T ss_pred eECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH
Confidence 35678999999998888 899999999999999999999999999999999999999999999998877765431
Q ss_pred hchhHHHHHHhhcChhHHHHHHHHHHHHhcccccccccccccccCCCceEEEeecceeEEEEEcCC-Cch-hHHHHHHHH
Q 005041 349 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 426 (717)
Q Consensus 349 ~g~~~a~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~A 426 (717)
++. ..++...++.++++++..+...... . ....+++++|+|||++|+|| ||. ++++++++|
T Consensus 92 ----~~~-------~~ev~~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~A 154 (466)
T cd07138 92 ----LAR-------AAQVGLGIGHLRAAADALKDFEFEE-----R-RGNSLVVREPIGVCGLITPWNWPLNQIVLKVAPA 154 (466)
T ss_pred ----HHH-------HHHHHHHHHHHHHHHHhhhhccccc-----c-CceEEEEEeecceEEEECCCccHHHHHHHHHHHH
Confidence 111 1134445555555554322211110 0 12346789999999999998 795 678999999
Q ss_pred HHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHhhcC
Q 005041 427 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK 504 (717)
Q Consensus 427 LaaGN~vVlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a~ 504 (717)
|++||+||+|||+.||+|+.++++++.+ + +|+|++|+|++ ++++++.|..||+|++|+||||+++|+.|++.+.
T Consensus 155 LaaGN~Vv~Kps~~~p~~~~~l~~~~~~----aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa 230 (466)
T cd07138 155 LAAGCTVVLKPSEVAPLSAIILAEILDE----AGLPAGVFNLVNGDGPVVGEALSAHPDVDMVSFTGSTRAGKRVAEAAA 230 (466)
T ss_pred HhcCCEEEEECCCcCcHHHHHHHHHHHH----cCCCCCcEEEEeCCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHHHh
Confidence 9999999999999999999999999987 7 99999999996 5568888889999999999999999999998873
Q ss_pred ---CCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccChhhHHHHHHHHHHcCc-------
Q 005041 505 ---IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------- 573 (717)
Q Consensus 505 ---~p~~lElGGk~p~iV~~dADl~~A~~~i~~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~------- 573 (717)
+|+++|||||||+||++|||+|.|++.+++|+|.|+| .|++++|||||+++| |+|+++|+++++++.+
T Consensus 231 ~~~~~v~lElgG~~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~g~p~~~~ 309 (466)
T cd07138 231 DTVKRVALELGGKSANIILDDADLEKAVPRGVAACFANSGQSCNAPTRMLVPRSRY-AEAEEIAAAAAEAYVVGDPRDPA 309 (466)
T ss_pred ccCCeEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEeHhHH-HHHHHHHHHHHHhcCCCCCCCCC
Confidence 8999999999999999999999999999999999986 999999999999999 8999999998876521
Q ss_pred ---------------------------eE-ecCcc-c----ccc-c-c-C-----CCCccccccccCceEEEEEeCCHHH
Q 005041 574 ---------------------------GL-FGGPR-A----SKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRA 612 (717)
Q Consensus 574 ---------------------------~~-~g~~~-~----~~~-~-p-i-----~~~~~~~eE~FGPVl~v~~~~~~de 612 (717)
++ +|+.. . .++ + | | ++|++++||+||||++|++|+|+||
T Consensus 310 ~~~gpli~~~~~~~~~~~v~~a~~~Ga~~l~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~fgPvl~v~~~~~~~e 389 (466)
T cd07138 310 TTLGPLASAAQFDRVQGYIQKGIEEGARLVAGGPGRPEGLERGYFVKPTVFADVTPDMTIAREEIFGPVLSIIPYDDEDE 389 (466)
T ss_pred CcCCccCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCcCCCCceECCEEecCCCCCChHHhCCCCCceEEEeccCCHHH
Confidence 12 23321 1 133 3 5 2 3588999999999999999999999
Q ss_pred HHHHHHhcCCCceeEEEecCHHHHHHHHhcCCeeeEEEcCCCCCCCCCccCCccccccccCcccccccchhhcccEEEEE
Q 005041 613 AIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWI 692 (717)
Q Consensus 613 Ai~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v 692 (717)
||+++|+++|||++||||+|.+++.++++++++|+|+||+.. ..+.+||||.+.||+| +++|.+|+++||+.|+|
T Consensus 390 ai~~~n~~~~gL~a~i~t~d~~~a~~~~~~l~~G~v~iN~~~-~~~~~PfgG~k~SG~G----~~~g~~~~~~~~~~k~v 464 (466)
T cd07138 390 AIAIANDTPYGLAGYVWSADPERARAVARRLRAGQVHINGAA-FNPGAPFGGYKQSGNG----REWGRYGLEEFLEVKSI 464 (466)
T ss_pred HHHHHhCCCCCceEEEEcCCHHHHHHHHHhcCcceEEECCCC-CCCCCCcCCcccccCC----ccchHHHHHHhcceeEE
Confidence 999999999999999999999999999999999999999863 4567899999999876 34689999999999987
Q ss_pred E
Q 005041 693 L 693 (717)
Q Consensus 693 ~ 693 (717)
+
T Consensus 465 ~ 465 (466)
T cd07138 465 Q 465 (466)
T ss_pred e
Confidence 4
No 73
>cd07131 ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like. Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD.
Probab=100.00 E-value=2.7e-71 Score=626.44 Aligned_cols=398 Identities=18% Similarity=0.194 Sum_probs=335.5
Q ss_pred HHHhc-CCcceEEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHh
Q 005041 270 IKVLE-GKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 348 (717)
Q Consensus 270 ~~~~t-g~~iGT~i~a~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~ 348 (717)
.+|.+ ++.++++..++ .+|+++++++|++||+.|++++.++|.++|++++++|++|+++|++++++|+|++..
T Consensus 19 ~~P~t~~~~~~~~~~~~------~~~v~~av~~a~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~ela~~~~~e~Gk~~~ 92 (478)
T cd07131 19 RNPADLEEVVGTFPLST------ASDVDAAVEAAREAFPEWRKVPAPRRAEYLFRAAELLKKRKEELARLVTREMGKPLA 92 (478)
T ss_pred ECCCCCCeEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHH
Confidence 56777 57788888777 899999999999999999999999999999999999999999999998777655421
Q ss_pred hchhHHHHHHhhcChhHHHHHHHHHHHHhcccc-cccccccccccCCCceEEEeecceeEEEEEcCC-Cch-hHHHHHHH
Q 005041 349 AGYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 425 (717)
Q Consensus 349 ~g~~~a~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ 425 (717)
++ ..++...++.+++++...+ ..+...+.. ..+...+.+++|+|||++|+|| ||. +.++++++
T Consensus 93 ----~~--------~~ev~~~i~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ 158 (478)
T cd07131 93 ----EG--------RGDVQEAIDMAQYAAGEGRRLFGETVPSE--LPNKDAMTRRQPIGVVALITPWNFPVAIPSWKIFP 158 (478)
T ss_pred ----HH--------HHHHHHHHHHHHHHHHHHHHhCCcccccC--CCCceEEEEeeceeEEEEECCcCcHHHHHHHHHHH
Confidence 21 1355566666666554332 122222111 1233467899999999999998 786 56789999
Q ss_pred HHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHhhc
Q 005041 426 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST 503 (717)
Q Consensus 426 ALaaGN~vVlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a 503 (717)
||++||+||+|||+.+|+|+..+++++.+ + ||+|++|+|++ ++++++.|..||+||+|+||||+++|+.|++.+
T Consensus 159 ALaaGN~VvlKps~~~p~~~~~l~~~l~~----aGlP~gvv~~v~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~~~a 234 (478)
T cd07131 159 ALVCGNTVVFKPAEDTPACALKLVELFAE----AGLPPGVVNVVHGRGEEVGEALVEHPDVDVVSFTGSTEVGERIGETC 234 (478)
T ss_pred HHHcCCEEEEECCCcCcHHHHHHHHHHHh----cCcCCCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHH
Confidence 99999999999999999999999999987 7 99999999996 555788888999999999999999999998876
Q ss_pred ---CCCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccChhhHHHHHHHHHHcCc------
Q 005041 504 ---KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------ 573 (717)
Q Consensus 504 ---~~p~~lElGGk~p~iV~~dADl~~A~~~i~~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~------ 573 (717)
.+|+++|||||||+||++|||+|.|++.+++++|.|+| .|+|++|||||+++| |+|+++|+++++++++
T Consensus 235 a~~~~~~~lelgG~~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-~~f~~~l~~~~~~~~~g~p~~~ 313 (478)
T cd07131 235 ARPNKRVALEMGGKNPIIVMDDADLDLALEGALWSAFGTTGQRCTATSRLIVHESVY-DEFLKRFVERAKRLRVGDGLDE 313 (478)
T ss_pred hhcCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEehhhH-HHHHHHHHHHHHhcCCCCCCCC
Confidence 48999999999999999999999999999999999987 999999999999999 8999999999887532
Q ss_pred ----------------------------eE-ecCccc------ccc-c-c-C-----CCCccccccccCceEEEEEeCCH
Q 005041 574 ----------------------------GL-FGGPRA------SKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVDDV 610 (717)
Q Consensus 574 ----------------------------~~-~g~~~~------~~~-~-p-i-----~~~~~~~eE~FGPVl~v~~~~~~ 610 (717)
++ .|+... .++ + | | ++|++++||+||||++|++|+|+
T Consensus 314 ~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~ 393 (478)
T cd07131 314 ETDMGPLINEAQLEKVLNYNEIGKEEGATLLLGGERLTGGGYEKGYFVEPTVFTDVTPDMRIAQEEIFGPVVALIEVSSL 393 (478)
T ss_pred CCcCCcCCCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCceECCEEEeCCCCCChHhhCCCcCCeEEEEEeCCH
Confidence 11 133221 122 3 5 2 35889999999999999999999
Q ss_pred HHHHHHHHhcCCCceeEEEecCHHHHHHHHhcCCeeeEEEcCCCCC-CCCCccCCccccccccCcccccccchhhcccEE
Q 005041 611 RAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRF-CDGARFGLGAEVGISTSRIHARGPVGVEGLLTT 689 (717)
Q Consensus 611 deAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~v~iN~~~~~-~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~ 689 (717)
||||+++|+++|||++||||+|.++++++++++++|+|+||+++.. .+.+||||.+.||+|. +++|.+|+++||+.
T Consensus 394 ~eai~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~pfgG~k~SG~G~---~~~g~~~~~~f~~~ 470 (478)
T cd07131 394 EEAIEIANDTEYGLSSAIYTEDVNKAFRARRDLEAGITYVNAPTIGAEVHLPFGGVKKSGNGH---REAGTTALDAFTEW 470 (478)
T ss_pred HHHHHHHhCCCCcceEEEEcCCHHHHHHHHHhcCccEEEECCCCCCCCCCCCCCCcccccCCC---cCCcHHHHHHhhhe
Confidence 9999999999999999999999999999999999999999997654 4678999999999862 23579999999999
Q ss_pred EEEEec
Q 005041 690 RWILRG 695 (717)
Q Consensus 690 k~v~~~ 695 (717)
|+|+++
T Consensus 471 k~i~~~ 476 (478)
T cd07131 471 KAVYVD 476 (478)
T ss_pred EEEEEe
Confidence 999875
No 74
>cd07108 ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like. NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD.
Probab=100.00 E-value=1.8e-71 Score=624.39 Aligned_cols=395 Identities=21% Similarity=0.223 Sum_probs=334.8
Q ss_pred HHhcCCcceEEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhhc
Q 005041 271 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAG 350 (717)
Q Consensus 271 ~~~tg~~iGT~i~a~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~g 350 (717)
+|.+++.++.+..++ .+|+++++++|++||+.|+++|.++|.++|++++++|++|+++|++++.+|+|++..
T Consensus 3 ~P~t~~~~~~~~~~~------~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~-- 74 (457)
T cd07108 3 NPATGQVIGEVPRSR------AADVDRAVAAAKAAFPEWAATPARERGKLLARIADALEARSEELARLLALETGNALR-- 74 (457)
T ss_pred CCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCcH--
Confidence 578999999988888 899999999999999999999999999999999999999999999999888766520
Q ss_pred hhHHHHHHhhcChhHHHHHHHHHHHHhccccc-ccccccccccCCCceEEEeecceeEEEEEcCC-Cch-hHHHHHHHHH
Q 005041 351 YAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAI 427 (717)
Q Consensus 351 ~~~a~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~AL 427 (717)
.++ ..|+..+++.+++++..... .+...+. ..+...+++++|+|||++|+|| ||. +.++++++||
T Consensus 75 -~~a--------~~ev~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~AL 142 (457)
T cd07108 75 -TQA--------RPEAAVLADLFRYFGGLAGELKGETLPF---GPDVLTYTVREPLGVVGAILPWNAPLMLAALKIAPAL 142 (457)
T ss_pred -HHH--------HHHHHHHHHHHHHHHHHHHHhCCceecc---CCCeeEEEEeecceEEEEECCCchHHHHHHHHHHHHH
Confidence 111 23566666666666644321 2222221 1234567889999999999998 685 5678999999
Q ss_pred HhCCEEEEeCCcchHHHHHHHHHHHHHhcccccCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHhhcC--
Q 005041 428 RSGNGLLLKGGKEAMRSNAILHKVITSAIPDTVGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK-- 504 (717)
Q Consensus 428 aaGN~vVlKps~~tp~t~~~l~~~~~~al~~alP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a~-- 504 (717)
++||+||+|||+.||+|+.++++++.+ ++|+|++|+|+| +.++++.|..||++|+|+||||+.+|+.|++.+.
T Consensus 143 aaGN~VVlKps~~~p~~~~~l~~~~~~----~lP~~~~~~v~g~~~~~~~~L~~~~~vd~v~ftGs~~~g~~v~~~aa~~ 218 (457)
T cd07108 143 VAGNTVVLKAAEDAPLAVLLLAEILAQ----VLPAGVLNVITGYGEECGAALVDHPDVDKVTFTGSTEVGKIIYRAAADR 218 (457)
T ss_pred HcCCEEEEECCCCCcHHHHHHHHHHHH----hCCcCcEEEEeCCchHHHHHHhcCCCcCEEEEECcHHHHHHHHHHHhcc
Confidence 999999999999999999999999986 499999999996 5567888888999999999999999999998773
Q ss_pred -CCEEEecCCcceEEEcCCCCHHHHHHHHHhhc-cCCCc-cccccceEEEcCcccChhhHHHHHHHHHHcCc--------
Q 005041 505 -IPVLGHADGICHVYVDKSANLDVAKNIVIDAK-IDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV-------- 573 (717)
Q Consensus 505 -~p~~lElGGk~p~iV~~dADl~~A~~~i~~~~-~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~-------- 573 (717)
+|+++|||||||+||++|||++.|++.+++++ |.|+| +|+|++|||||+++| |+|+++|+++++++.+
T Consensus 219 l~~~~lelgG~~~~iV~~dAdl~~Aa~~iv~~~~f~~~GQ~C~a~~rv~V~~~i~-~~f~~~l~~~~~~~~vg~p~~~~~ 297 (457)
T cd07108 219 LIPVSLELGGKSPMIVFPDADLDDAVDGAIAGMRFTRQGQSCTAGSRLFVHEDIY-DAFLEKLVAKLSKLKIGDPLDEAT 297 (457)
T ss_pred CCeEEEECCCCCeeEECCCCCHHHHHHHHHHhhHhhcCCCCCCCCeEEEEehHHH-HHHHHHHHHHHhhCCCCCCCCCCC
Confidence 89999999999999999999999999999995 99876 999999999999999 8999999999876521
Q ss_pred ---------------------------eE-ecCccc------ccc-c-c-C-----CCCccccccccCceEEEEEeCCHH
Q 005041 574 ---------------------------GL-FGGPRA------SKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVDDVR 611 (717)
Q Consensus 574 ---------------------------~~-~g~~~~------~~~-~-p-i-----~~~~~~~eE~FGPVl~v~~~~~~d 611 (717)
++ +|+... .++ + | | ++|++++||+||||++|++|+|+|
T Consensus 298 ~~gpli~~~~~~~~~~~i~~a~~~~ga~vl~gG~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~ 377 (457)
T cd07108 298 DIGAIISEKQFAKVCGYIDLGLSTSGATVLRGGPLPGEGPLADGFFVQPTIFSGVDNEWRLAREEIFGPVLCAIPWKDED 377 (457)
T ss_pred CcCCCCCHHHHHHHHHHHHHHHhCCCCEEEeCCCcCccCCCCCceEECCEEEecCCCCChhhhcCCCCceEEeecCCCHH
Confidence 11 133221 132 3 5 2 358899999999999999999999
Q ss_pred HHHHHHHhcCCCceeEEEecCHHHHHHHHhcCCeeeEEEcCCCCCCCCCccCCccccccccCcccccccch-hhcccEEE
Q 005041 612 AAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVG-VEGLLTTR 690 (717)
Q Consensus 612 eAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfG~g~~~G~~~~~~~~~g~~g-~~~ft~~k 690 (717)
|||+++|+++|||++||||+|.++++++++++++|.|+||++....+..||||.+.||+|. ++|.++ +++||+.|
T Consensus 378 eai~~~n~~~~gLs~~vft~d~~~a~~~~~~l~~g~v~iN~~~~~~~~~pfGG~k~SG~G~----~~g~~~~~~~f~~~k 453 (457)
T cd07108 378 EVIAMANDSHYGLAAYVWTRDLGRALRAAHALEAGWVQVNQGGGQQPGQSYGGFKQSGLGR----EASLEGMLEHFTQKK 453 (457)
T ss_pred HHHHHHhCCCcCceeEEEcCCHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCcccCcCCC----CccchhHHHHhhceE
Confidence 9999999999999999999999999999999999999999987666778999999999862 457766 79999999
Q ss_pred EEEe
Q 005041 691 WILR 694 (717)
Q Consensus 691 ~v~~ 694 (717)
++.+
T Consensus 454 ~i~~ 457 (457)
T cd07108 454 TVNI 457 (457)
T ss_pred EEeC
Confidence 9853
No 75
>cd07100 ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like. Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate.
Probab=100.00 E-value=1.7e-71 Score=619.00 Aligned_cols=374 Identities=17% Similarity=0.205 Sum_probs=318.0
Q ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhhchhHHHHHHhhcChhHHHHHHHHHH
Q 005041 295 AREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIR 374 (717)
Q Consensus 295 v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~g~~~a~~~~~~~~~~~i~~~~~~~~ 374 (717)
|++++++|++||+.|+++|.++|.++|++++++|+++.++|++++++|+|++.. ++ ..|+..+++.++
T Consensus 1 v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~----~a--------~~ev~~~~~~~~ 68 (429)
T cd07100 1 IEAALDRAHAAFLAWRKTSFAERAALLRKLADLLRERKDELARLITLEMGKPIA----EA--------RAEVEKCAWICR 68 (429)
T ss_pred CHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHH----HH--------HHHHHHHHHHHH
Confidence 478999999999999999999999999999999999999999999888766532 22 235555666666
Q ss_pred HHhcccccc-c-ccccccccCCCceEEEeecceeEEEEEcCC-Cch-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHH
Q 005041 375 ILADMEEPI-G-QILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHK 450 (717)
Q Consensus 375 ~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~ 450 (717)
+++...+.. + ...+. .+...+++++|+|||++|+|| ||. +.+++++|||++||+||+|||+.+|+++..|++
T Consensus 69 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~P~GvV~~I~P~N~Pl~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~ 144 (429)
T cd07100 69 YYAENAEAFLADEPIET----DAGKAYVRYEPLGVVLGIMPWNFPFWQVFRFAAPNLMAGNTVLLKHASNVPGCALAIEE 144 (429)
T ss_pred HHHHHHHHhcCCeeccC----CCceEEEEEEeeeEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHH
Confidence 655433211 1 11111 133467889999999999998 686 567899999999999999999999999999999
Q ss_pred HHHHhcccc-cCcCceEEecCCChhhhhhcCCCCccEEEeecCHHHHHHHHhhcC---CCEEEecCCcceEEEcCCCCHH
Q 005041 451 VITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK---IPVLGHADGICHVYVDKSANLD 526 (717)
Q Consensus 451 ~~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a~---~p~~lElGGk~p~iV~~dADl~ 526 (717)
++.+ + +|+|++|+|++..+.+..|..||+|++|+||||+++|+.|++.+. ||+++|||||||+||++|||+|
T Consensus 145 ~l~~----aglP~gvv~~v~g~~~~~~~l~~~~~i~~v~fTGs~~~g~~i~~~aa~~~~~~~lelgG~~p~iV~~daDl~ 220 (429)
T cd07100 145 LFRE----AGFPEGVFQNLLIDSDQVEAIIADPRVRGVTLTGSERAGRAVAAEAGKNLKKSVLELGGSDPFIVLDDADLD 220 (429)
T ss_pred HHHH----cCCCcCcEEEEeCCchhHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCcceEEecCCCCeeEECCCCCHH
Confidence 9987 7 999999999964345566778999999999999999999998873 8999999999999999999999
Q ss_pred HHHHHHHhhccCCCc-cccccceEEEcCcccChhhHHHHHHHHHHcCc--------------------------------
Q 005041 527 VAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV-------------------------------- 573 (717)
Q Consensus 527 ~A~~~i~~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~-------------------------------- 573 (717)
.|++.+++|+|.|+| .|+|++|||||+++| |+|+++|+++++++.+
T Consensus 221 ~aa~~i~~~~~~~~GQ~C~a~~rv~v~~~i~-~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ 299 (429)
T cd07100 221 KAVKTAVKGRLQNAGQSCIAAKRFIVHEDVY-DEFLEKFVEAMAALKVGDPMDEDTDLGPLARKDLRDELHEQVEEAVAA 299 (429)
T ss_pred HHHHHHHHHHHhccCCCCCCCeEEEEcHHHH-HHHHHHHHHHHHhccCCCCccCCCCccCCCCHHHHHHHHHHHHHHHHC
Confidence 999999999999987 999999999999999 8999999999887531
Q ss_pred --eE-ecCccc--cc-cc-c-C-----CCCccccccccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEecCHHHHHHHH
Q 005041 574 --GL-FGGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFL 640 (717)
Q Consensus 574 --~~-~g~~~~--~~-~~-p-i-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~I~t~d~~~a~~~~ 640 (717)
++ .|+... .+ ++ | | ++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++++
T Consensus 300 Ga~~~~gg~~~~~~g~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~ 379 (429)
T cd07100 300 GATLLLGGKRPDGPGAFYPPTVLTDVTPGMPAYDEELFGPVAAVIKVKDEEEAIALANDSPFGLGGSVFTTDLERAERVA 379 (429)
T ss_pred CCEEEeCCCcCCCCCeEEcCEEeecCCCCCHHHhCCCCCCeEEEeeeCCHHHHHHHHhCCCcCceEEEECCCHHHHHHHH
Confidence 12 243322 12 33 5 2 35889999999999999999999999999999999999999999999999999
Q ss_pred hcCCeeeEEEcCCCCCCCCCccCCccccccccCcccccccchhhcccEEEEEE
Q 005041 641 CQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 693 (717)
Q Consensus 641 ~~l~~G~v~iN~~~~~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v~ 693 (717)
+++++|.|+||++....+.+||||.+.||+| +++|++|+++||+.|++.
T Consensus 380 ~~l~~g~v~iN~~~~~~~~~pfGG~~~SG~G----~~~g~~~l~~~~~~k~v~ 428 (429)
T cd07100 380 RRLEAGMVFINGMVKSDPRLPFGGVKRSGYG----RELGRFGIREFVNIKTVW 428 (429)
T ss_pred HhCCcCeEEECCCCCCCCCCCcCCccccccC----CcchHHHHHHhcceeEEe
Confidence 9999999999998766677899999999986 356999999999999985
No 76
>PRK09457 astD succinylglutamic semialdehyde dehydrogenase; Reviewed
Probab=100.00 E-value=2.8e-71 Score=625.61 Aligned_cols=397 Identities=17% Similarity=0.132 Sum_probs=330.0
Q ss_pred HHHHhcCCcceEEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHh
Q 005041 269 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 348 (717)
Q Consensus 269 l~~~~tg~~iGT~i~a~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~ 348 (717)
..+|.+++.++++..++ .+++++++++|++||+.|+++|..+|.++|++++++|++|+++|++++++|.|++..
T Consensus 19 ~~~P~t~~~i~~~~~a~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ 92 (487)
T PRK09457 19 SRNPVSGEVLWQGNDAT------AAQVDAAVRAARAAFPAWARLSFEERQAIVERFAALLEENKEELAEVIARETGKPLW 92 (487)
T ss_pred EECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhCCCHH
Confidence 35688999999998888 899999999999999999999999999999999999999999999998887765432
Q ss_pred hchhHHHHHHhhcChhHHHHHHHHHHHHhccc-ccccccccccccCCCceEEEeecceeEEEEEcCC-Cch-hHHHHHHH
Q 005041 349 AGYAKSLVSRLALKPGKISSLAKSIRILADME-EPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 425 (717)
Q Consensus 349 ~g~~~a~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ 425 (717)
++. .|+..+++.+++++... +..+..... ..+...+++|+|+|||++|+|| ||. +..+++++
T Consensus 93 ----~a~--------~ev~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ 157 (487)
T PRK09457 93 ----EAA--------TEVTAMINKIAISIQAYHERTGEKRSE---MADGAAVLRHRPHGVVAVFGPYNFPGHLPNGHIVP 157 (487)
T ss_pred ----HHH--------HHHHHHHHHHHHHHHHHHHhcCceecc---CCCceeEEEEeccEEEEEECCCchHHHHHHHHHHH
Confidence 221 24444555444433221 111221111 1233457889999999999998 685 56799999
Q ss_pred HHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecCCChhhhhhcCCCCccEEEeecCHHHHHHHHhhc-
Q 005041 426 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST- 503 (717)
Q Consensus 426 ALaaGN~vVlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a- 503 (717)
||++||+||+|||+.||+|+.++++++.+ + ||+|++|+|+|+.++++.|..||+||+|+||||+++|+.|++.+
T Consensus 158 ALaaGN~VvlKPs~~tp~t~~~l~~l~~~----aGlP~gvv~~v~g~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa 233 (487)
T PRK09457 158 ALLAGNTVVFKPSELTPWVAELTVKLWQQ----AGLPAGVLNLVQGGRETGKALAAHPDIDGLLFTGSANTGYLLHRQFA 233 (487)
T ss_pred HHHcCCEEEEECCCCCcHHHHHHHHHHHH----hCcCcCeEEEEeCCHHHHHHHhcCCCcCEEEEECCHHHHHHHHHHHh
Confidence 99999999999999999999999999987 7 99999999997656788888999999999999999999999864
Q ss_pred ---CCCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCccc-ChhhHHHHHHHHHHcCce----
Q 005041 504 ---KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLA-CNGALNELVVELQHEGVG---- 574 (717)
Q Consensus 504 ---~~p~~lElGGk~p~iV~~dADl~~A~~~i~~~~~~n~g-~C~a~~rv~V~~~i~-d~~f~~~l~~~~~~~~~~---- 574 (717)
.+|++||||||||+||++|||+|.|++.+++++|.|+| .|+|++|||||+++| | +|+++|+++++++.+.
T Consensus 234 ~~~~~~~~lElGGk~p~IV~~dADl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~d-~f~~~l~~~~~~~~vG~p~~ 312 (487)
T PRK09457 234 GQPEKILALEMGGNNPLVIDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPQGAQGD-AFLARLVAVAKRLTVGRWDA 312 (487)
T ss_pred hcCCCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHhhccCCCCCCCceEEEeccccHH-HHHHHHHHHHhcCcCCCCCc
Confidence 26789999999999999999999999999999999987 999999999999996 6 9999999988765321
Q ss_pred -------------------------------E-ecCccc--c-ccc-c-C----CCCccccccccCceEEEEEeCCHHHH
Q 005041 575 -------------------------------L-FGGPRA--S-KLL-Q-I----PETRLFHHEYNSMVCTVEIVDDVRAA 613 (717)
Q Consensus 575 -------------------------------~-~g~~~~--~-~~~-p-i----~~~~~~~eE~FGPVl~v~~~~~~deA 613 (717)
+ .|+... . .|+ | | ++|++++||+||||++|++|+|+|||
T Consensus 313 ~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~PTvl~v~~~~~i~~eE~FGPVl~V~~~~~~dea 392 (487)
T PRK09457 313 EPQPFMGAVISEQAAQGLVAAQAQLLALGGKSLLEMTQLQAGTGLLTPGIIDVTGVAELPDEEYFGPLLQVVRYDDFDEA 392 (487)
T ss_pred CCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCccCCCCeeEecEEeccCCCChHHhCCCcCCeEEEEEeCCHHHH
Confidence 1 122111 1 233 5 2 35889999999999999999999999
Q ss_pred HHHHHhcCCCceeEEEecCHHHHHHHHhcCCeeeEEEcCCCCC-CCCCccCCccccccccCcccccccchhhcccEEEEE
Q 005041 614 IDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRF-CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWI 692 (717)
Q Consensus 614 i~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~v~iN~~~~~-~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v 692 (717)
|+++|+++|||++||||+|.++++++++++++|+|+||++... .+.+||||.+.||+|+ ++| +...+||+.|++
T Consensus 393 i~~~N~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~----~~g-~~~~~~~~~k~~ 467 (487)
T PRK09457 393 IRLANNTRFGLSAGLLSDDREDYDQFLLEIRAGIVNWNKPLTGASSAAPFGGVGASGNHR----PSA-YYAADYCAYPMA 467 (487)
T ss_pred HHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEECCCCCCCCCCCCCCcccccCCC----CCc-hhHhhheeeeEE
Confidence 9999999999999999999999999999999999999987544 3568999999999862 346 444669999999
Q ss_pred EecC
Q 005041 693 LRGN 696 (717)
Q Consensus 693 ~~~~ 696 (717)
.+..
T Consensus 468 ~~~~ 471 (487)
T PRK09457 468 SLES 471 (487)
T ss_pred EEec
Confidence 8874
No 77
>cd07102 ALDH_EDX86601 Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD.
Probab=100.00 E-value=2.3e-71 Score=623.36 Aligned_cols=395 Identities=18% Similarity=0.185 Sum_probs=332.0
Q ss_pred HHhcCCcceEEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhhc
Q 005041 271 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAG 350 (717)
Q Consensus 271 ~~~tg~~iGT~i~a~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~g 350 (717)
+|.+++.++++...+ .+|+++++++|++||+.|+++|..+|.++|++++++|+++.++|++++.+|.+++..
T Consensus 2 ~P~t~~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~-- 73 (452)
T cd07102 2 SPIDGSVIAERPLAS------LEAVRAALERARAAQKGWRAVPLEERKAIVTRAVELLAANTDEIAEELTWQMGRPIA-- 73 (452)
T ss_pred CCCCCCEEEEEcCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHhCCCHH--
Confidence 477899999988888 889999999999999999999999999999999999999999999998877765432
Q ss_pred hhHHHHHHhhcChhHHHHHHHHHHHHhcccccccccccccccCCCceEEEeecceeEEEEEcCC-Cch-hHHHHHHHHHH
Q 005041 351 YAKSLVSRLALKPGKISSLAKSIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIR 428 (717)
Q Consensus 351 ~~~a~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALa 428 (717)
++. .++......++++++.++.+. +..... ...+...+.+++|+|||++|+|| +|. +.+++++|||+
T Consensus 74 --~~~-~ev~~~~~~~~~~~~~~~~~~------~~~~~~--~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~l~~ALa 142 (452)
T cd07102 74 --QAG-GEIRGMLERARYMISIAEEAL------ADIRVP--EKDGFERYIRREPLGVVLIIAPWNYPYLTAVNAVIPALL 142 (452)
T ss_pred --HHH-HHHHHHHHHHHHHHHHHHHhc------CCcccC--CCCCeeEEEEEEeccEEEEEcCCchHHHHHHHHHHHHHH
Confidence 211 122222233344444333321 111110 11344567889999999999998 686 56789999999
Q ss_pred hCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecCCChhhhhhcCCCCccEEEeecCHHHHHHHHhhcC---
Q 005041 429 SGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK--- 504 (717)
Q Consensus 429 aGN~vVlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a~--- 504 (717)
+||+||+|||+.+|+++..|++++.+ + +|+|++|+|++..+.+..|..||+||+|+||||+++|+.|++.+.
T Consensus 143 aGN~VVlKps~~~~~~~~~l~~~l~~----aGlP~g~~~~v~g~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~a~~~~ 218 (452)
T cd07102 143 AGNAVILKHSPQTPLCGERFAAAFAE----AGLPEGVFQVLHLSHETSAALIADPRIDHVSFTGSVAGGRAIQRAAAGRF 218 (452)
T ss_pred cCCEEEEECCCCCcHHHHHHHHHHHh----cCCCcCcEEEEeCCchhHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcC
Confidence 99999999999999999999999986 7 999999999964467777888999999999999999999998763
Q ss_pred CCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccChhhHHHHHHHHHHcCc----------
Q 005041 505 IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV---------- 573 (717)
Q Consensus 505 ~p~~lElGGk~p~iV~~dADl~~A~~~i~~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~---------- 573 (717)
+|+++|||||||+||++|||+|.|++.+++|+|+|+| .|++++|+|||+++| |+|+++|+++++++.+
T Consensus 219 ~~v~lelgG~~~~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~-~~f~~~L~~~~~~l~vg~p~~~~~~~ 297 (452)
T cd07102 219 IKVGLELGGKDPAYVRPDADLDAAAESLVDGAFFNSGQSCCSIERIYVHESIY-DAFVEAFVAVVKGYKLGDPLDPSTTL 297 (452)
T ss_pred CcEEEECCCCCceEEcCCCCHHHHHHHHHHHHHHhCCCCCcCCcEEEEeHHHH-HHHHHHHHHHHHhccCCCCCCCCCCC
Confidence 8999999999999999999999999999999999987 999999999999999 8999999999876532
Q ss_pred ------------------------eE-ecCcc-----ccc-cc-c-C-----CCCccccccccCceEEEEEeCCHHHHHH
Q 005041 574 ------------------------GL-FGGPR-----ASK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAID 615 (717)
Q Consensus 574 ------------------------~~-~g~~~-----~~~-~~-p-i-----~~~~~~~eE~FGPVl~v~~~~~~deAi~ 615 (717)
++ +|+.+ ..+ |+ | | ++|++++||+||||++|++|+|+||||+
T Consensus 298 gpli~~~~~~~i~~~i~~a~~~ga~vl~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~ 377 (452)
T cd07102 298 GPVVSARAADFVRAQIADAIAKGARALIDGALFPEDKAGGAYLAPTVLTNVDHSMRVMREETFGPVVGIMKVKSDAEAIA 377 (452)
T ss_pred CCCcCHHHHHHHHHHHHHHHhCCCEEEeCCCCCCCCCCCCceEcCEEEecCCCCChhhhcCCcCCeEEEEEeCCHHHHHH
Confidence 11 23322 123 33 5 2 3588999999999999999999999999
Q ss_pred HHHhcCCCceeEEEecCHHHHHHHHhcCCeeeEEEcCCCCCCCCCccCCccccccccCcccccccchhhcccEEEEEE
Q 005041 616 HIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 693 (717)
Q Consensus 616 ~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v~ 693 (717)
++|+++|||++||||+|.+++.++++++++|.|+||++....+..||||.+.||+| +++|.+|+++||+.|+++
T Consensus 378 ~~n~~~~gL~~~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfgG~k~SG~G----~~~g~~~~~~~~~~k~~~ 451 (452)
T cd07102 378 LMNDSEYGLTASVWTKDIARAEALGEQLETGTVFMNRCDYLDPALAWTGVKDSGRG----VTLSRLGYDQLTRPKSYH 451 (452)
T ss_pred HHhCCCCCceEEEEcCCHHHHHHHHHHcCcceEEECCCCCCCCCCCCCCccccccC----ccchHHHHHHHhceeEEe
Confidence 99999999999999999999999999999999999998766667899999999986 356999999999999985
No 78
>PRK09407 gabD2 succinic semialdehyde dehydrogenase; Reviewed
Probab=100.00 E-value=3e-71 Score=629.62 Aligned_cols=397 Identities=17% Similarity=0.177 Sum_probs=331.7
Q ss_pred HHhcCCcceEEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhhc
Q 005041 271 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAG 350 (717)
Q Consensus 271 ~~~tg~~iGT~i~a~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~g 350 (717)
+|++++.++++..++ .+|+++++++|++||+.|+++|.++|.++|++++++|++|.++|++++++|+|++..
T Consensus 38 nP~tg~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~e~Gk~~~-- 109 (524)
T PRK09407 38 APFTGEPLATVPVST------AADVEAAFARARAAQRAWAATPVRERAAVLLRFHDLVLENREELLDLVQLETGKARR-- 109 (524)
T ss_pred CCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH--
Confidence 367899999998888 899999999999999999999999999999999999999999999999988876532
Q ss_pred hhHHHHHHhhcChhHHHHHHHHHHHHhccccc-ccccccccccCCCceEEEeecceeEEEEEcCC-Cch-hHHHHHHHHH
Q 005041 351 YAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAI 427 (717)
Q Consensus 351 ~~~a~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~AL 427 (717)
++. .|+...+..+++++...+. .+..............+.+|+|+|||++|+|| ||. +.+++++|||
T Consensus 110 --~a~--------~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P~N~Pl~~~~~~~~~AL 179 (524)
T PRK09407 110 --HAF--------EEVLDVALTARYYARRAPKLLAPRRRAGALPVLTKTTELRQPKGVVGVISPWNYPLTLAVSDAIPAL 179 (524)
T ss_pred --HHH--------HHHHHHHHHHHHHHHHHHHhhCCccccccCCCCceEEEEEecceEEEEEeCCCChHHHHHHHHHHHH
Confidence 221 2344444444444432211 11110000001123567889999999999998 785 5779999999
Q ss_pred HhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHhhcC-
Q 005041 428 RSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK- 504 (717)
Q Consensus 428 aaGN~vVlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a~- 504 (717)
++||+||+|||+.||+|+..+++++.+ + +|+|++|+|++ +.++++.|..| +|+|+||||+++|+.|++.++
T Consensus 180 aaGN~VIlKPs~~tp~~~~~l~~ll~e----aGlP~gvv~~v~g~~~~~~~~L~~~--~d~V~fTGs~~~g~~v~~~aa~ 253 (524)
T PRK09407 180 LAGNAVVLKPDSQTPLTALAAVELLYE----AGLPRDLWQVVTGPGPVVGTALVDN--ADYLMFTGSTATGRVLAEQAGR 253 (524)
T ss_pred HcCCEEEEECCCCCHHHHHHHHHHHHH----cCCCcccEEEEecCCchHHHHHHhc--CCEEEEECCHHHHHHHHHHHHh
Confidence 999999999999999999999999987 7 99999999996 55677777765 899999999999999998773
Q ss_pred --CCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccChhhHHHHHHHHHHcCc--------
Q 005041 505 --IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV-------- 573 (717)
Q Consensus 505 --~p~~lElGGk~p~iV~~dADl~~A~~~i~~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~-------- 573 (717)
+|+++|||||||+||++|||++.|++.+++|+|.|+| .|+|++|+|||+++| |+|+++|+++++++.+
T Consensus 254 ~~~~v~lElGGknp~iV~~dADl~~Aa~~i~~~~f~~sGQ~C~a~~rv~V~~~v~-d~f~~~L~~~~~~l~~G~~~~~~~ 332 (524)
T PRK09407 254 RLIGFSLELGGKNPMIVLDDADLDKAAAGAVRACFSNAGQLCISIERIYVHESIY-DEFVRAFVAAVRAMRLGAGYDYSA 332 (524)
T ss_pred cCCcEEEECCCCceeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHH-HHHHHHHHHHHHhcCCCCCCCcCC
Confidence 8999999999999999999999999999999999976 999999999999999 8999999999887631
Q ss_pred --------------------------eE-ecCccc---cc-cc-c-C-----CCCccccccccCceEEEEEeCCHHHHHH
Q 005041 574 --------------------------GL-FGGPRA---SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAID 615 (717)
Q Consensus 574 --------------------------~~-~g~~~~---~~-~~-p-i-----~~~~~~~eE~FGPVl~v~~~~~~deAi~ 615 (717)
++ .|+... .+ |+ | | ++|++++||+||||++|++|+|+||||+
T Consensus 333 ~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~deai~ 412 (524)
T PRK09407 333 DMGSLISEAQLETVSAHVDDAVAKGATVLAGGKARPDLGPLFYEPTVLTGVTPDMELAREETFGPVVSVYPVADVDEAVE 412 (524)
T ss_pred ccCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCceEeCEEEeCCCCCChHHhCCCCCCeEEEEeeCCHHHHHH
Confidence 12 243221 12 33 5 3 3589999999999999999999999999
Q ss_pred HHHhcCCCceeEEEecCHHHHHHHHhcCCeeeEEEcCCCC---CCCCCccCCccccccccCcccccccchhhcccEEEEE
Q 005041 616 HIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTR---FCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWI 692 (717)
Q Consensus 616 ~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~v~iN~~~~---~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v 692 (717)
++|+++|||++||||+|.+++.++++++++|.|+||++.. .....||||.+.||+| +++|.+|+++||+.|+|
T Consensus 413 ~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~v~IN~~~~~~~~~~~~PfGG~k~SG~G----~~~g~~~l~~ft~~k~v 488 (524)
T PRK09407 413 RANDTPYGLNASVWTGDTARGRAIAARIRAGTVNVNEGYAAAWGSVDAPMGGMKDSGLG----RRHGAEGLLKYTESQTI 488 (524)
T ss_pred HHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCcCcCCCCCCCCCccccccC----ccchHHHHHHhCCeEEE
Confidence 9999999999999999999999999999999999998654 2345799999999986 24689999999999999
Q ss_pred EecC
Q 005041 693 LRGN 696 (717)
Q Consensus 693 ~~~~ 696 (717)
.++.
T Consensus 489 ~~~~ 492 (524)
T PRK09407 489 ATQR 492 (524)
T ss_pred EEcc
Confidence 8864
No 79
>cd07139 ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like. The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD.
Probab=100.00 E-value=1.9e-71 Score=626.60 Aligned_cols=394 Identities=20% Similarity=0.193 Sum_probs=334.8
Q ss_pred HHHhcCCcceEEEecCCcccccHhhHHHHHHHHHHHHHH--HhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
Q 005041 270 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRR--LQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQ 347 (717)
Q Consensus 270 ~~~~tg~~iGT~i~a~~~~~~~~~~v~~av~~A~~A~~~--w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~ 347 (717)
.+|++++.++.+..++ .+|+++++++|++||+. |+++|..+|.++|++++++|++|+++|+++++.|+|++.
T Consensus 19 ~~P~tg~~i~~~~~~~------~~~v~~av~~a~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~ 92 (471)
T cd07139 19 VSPATEEVVGRVPEAT------PADVDAAVAAARRAFDNGPWPRLSPAERAAVLRRLADALEARADELARLWTAENGMPI 92 (471)
T ss_pred ECCCCCCEeEEEeCCC------HHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH
Confidence 5688999999998888 89999999999999985 999999999999999999999999999999887765542
Q ss_pred hhchhHHHHHHhhcChhHHHHHHHHHHHHhcccccc-c-ccccccccCCCceEEEeecceeEEEEEcCC-Cch-hHHHHH
Q 005041 348 EAGYAKSLVSRLALKPGKISSLAKSIRILADMEEPI-G-QILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIA 423 (717)
Q Consensus 348 ~~g~~~a~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~ 423 (717)
. ++. ..++..+++.+++++...+.. + ...+. ..+...+++|+|+|||++|+|| ||. +.++++
T Consensus 93 ~----~~~-------~~ev~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~i 158 (471)
T cd07139 93 S----WSR-------RAQGPGPAALLRYYAALARDFPFEERRPG---SGGGHVLVRREPVGVVAAIVPWNAPLFLAALKI 158 (471)
T ss_pred H----HHH-------HHHHHHHHHHHHHHHHHHHHhcCCccccC---CCCceEEEEEEeccEEEEEcCCchHHHHHHHHH
Confidence 1 111 124566666666666443211 1 11111 1234567889999999999998 685 567999
Q ss_pred HHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecCCChhhhhhcCCCCccEEEeecCHHHHHHHHhh
Q 005041 424 SLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKES 502 (717)
Q Consensus 424 ~~ALaaGN~vVlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~ 502 (717)
++||++||+||+|||+.+|+++..+.+++.+ + ||+|++|+|+++.+.+..|..||++++|+||||+.+|+.|++.
T Consensus 159 ~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~----aglP~gv~~~v~g~~~~~~~l~~~~~i~~v~ftGs~~~g~~v~~~ 234 (471)
T cd07139 159 APALAAGCTVVLKPSPETPLDAYLLAEAAEE----AGLPPGVVNVVPADREVGEYLVRHPGVDKVSFTGSTAAGRRIAAV 234 (471)
T ss_pred HHHHhcCCEEEEECCCcCCHHHHHHHHHHHH----cCCCCCcEEEEeCCHHHHHHHhcCCCCCEEEEECcHHHHHHHHHH
Confidence 9999999999999999999999999999986 7 9999999999755577888889999999999999999999887
Q ss_pred cC---CCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccChhhHHHHHHHHHHcCc-----
Q 005041 503 TK---IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV----- 573 (717)
Q Consensus 503 a~---~p~~lElGGk~p~iV~~dADl~~A~~~i~~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~----- 573 (717)
++ +|+++|||||||+||++|||+|.|++.+++|+|.|+| .|+|++|||||+++| |+|+++|+++++++.+
T Consensus 235 ~~~~~~~~~lElGG~np~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~-d~f~~~l~~~~~~~~~g~p~~ 313 (471)
T cd07139 235 CGERLARVTLELGGKSAAIVLDDADLDAAVPGLVPASLMNNGQVCVALTRILVPRSRY-DEVVEALAAAVAALKVGDPLD 313 (471)
T ss_pred HHhcCCEEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeHhHH-HHHHHHHHHHHHhCCcCCCCC
Confidence 63 8999999999999999999999999999999999976 999999999999999 8999999999877531
Q ss_pred -----------------------------eE-ecCccc----ccc-c-c-C-----CCCccccccccCceEEEEEeCCHH
Q 005041 574 -----------------------------GL-FGGPRA----SKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVDDVR 611 (717)
Q Consensus 574 -----------------------------~~-~g~~~~----~~~-~-p-i-----~~~~~~~eE~FGPVl~v~~~~~~d 611 (717)
++ +|+... .++ + | | +++++++||+||||++|++|+|+|
T Consensus 314 ~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~ 393 (471)
T cd07139 314 PATQIGPLASARQRERVEGYIAKGRAEGARLVTGGGRPAGLDRGWFVEPTLFADVDNDMRIAQEEIFGPVLSVIPYDDED 393 (471)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCeEEccEEEecCCCcchHHhCccCCCeEEEeecCCHH
Confidence 11 233221 133 3 5 2 358899999999999999999999
Q ss_pred HHHHHHHhcCCCceeEEEecCHHHHHHHHhcCCeeeEEEcCCCCCCCCCccCCccccccccCcccccccchhhcccEEEE
Q 005041 612 AAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRW 691 (717)
Q Consensus 612 eAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~ 691 (717)
|||+++|+++|||++||||+|.+++.++++++++|+|+||++. ..+.+||||.+.||+| +++|.+|+++||+.|+
T Consensus 394 eai~~~n~~~~gL~a~i~s~d~~~~~~~~~~l~~G~v~iN~~~-~~~~~PfgG~k~SG~G----~~~g~~~~~~ft~~k~ 468 (471)
T cd07139 394 DAVRIANDSDYGLSGSVWTADVERGLAVARRIRTGTVGVNGFR-LDFGAPFGGFKQSGIG----REGGPEGLDAYLETKS 468 (471)
T ss_pred HHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCC-CCCCCCCCCcccccCC----ccchHHHHHHHhceeE
Confidence 9999999999999999999999999999999999999999876 5567899999999986 3569999999999999
Q ss_pred EE
Q 005041 692 IL 693 (717)
Q Consensus 692 v~ 693 (717)
|+
T Consensus 469 i~ 470 (471)
T cd07139 469 IY 470 (471)
T ss_pred Ee
Confidence 86
No 80
>cd07136 ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydrogenase ywdH-like. Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD.
Probab=100.00 E-value=3e-71 Score=615.90 Aligned_cols=379 Identities=20% Similarity=0.196 Sum_probs=313.2
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhhchhHHHHHHhhcChhHHHHHHHHHHHH
Q 005041 297 EMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRIL 376 (717)
Q Consensus 297 ~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~g~~~a~~~~~~~~~~~i~~~~~~~~~~ 376 (717)
+.+++|++||+.|+++|..+|+++|++++++|++|.++|+++++.|++|+. .++.. .|+..+++.++++
T Consensus 2 ~~v~~a~~a~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~----~~a~~-------~ev~~~~~~~~~~ 70 (449)
T cd07136 2 SLVEKQRAFFKTGATKDVEFRIEQLKKLKQAIKKYENEILEALKKDLGKSE----FEAYM-------TEIGFVLSEINYA 70 (449)
T ss_pred hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH----HHHHH-------HHHHHHHHHHHHH
Confidence 578899999999999999999999999999999999999999988876653 22221 2344444444444
Q ss_pred hccccc-ccc-cccccccCCCceEEEeecceeEEEEEcCC-Cch-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHH
Q 005041 377 ADMEEP-IGQ-ILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVI 452 (717)
Q Consensus 377 ~~~~~~-~~~-~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~~~ 452 (717)
+...+. .+. ..+......+...+++++|+|||++|+|| ||. +.+++++|||++||+||+|||+.||+++..+++++
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vi~Kps~~tp~~~~~l~~~~ 150 (449)
T cd07136 71 IKHLKKWMKPKRVKTPLLNFPSKSYIYYEPYGVVLIIAPWNYPFQLALAPLIGAIAAGNTAVLKPSELTPNTSKVIAKII 150 (449)
T ss_pred HHHHHHHhCCCccCCccccCCceeEEEEecCeEEEEECCCchHHHHHHHHHHHHHhcCCEEEEECcccchHHHHHHHHHH
Confidence 432211 111 11110001233567889999999999998 685 56799999999999999999999999999999999
Q ss_pred HHhcccccCcCceEEecCCChhhhhhcCCCCccEEEeecCHHHHHHHHhhc---CCCEEEecCCcceEEEcCCCCHHHHH
Q 005041 453 TSAIPDTVGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST---KIPVLGHADGICHVYVDKSANLDVAK 529 (717)
Q Consensus 453 ~~al~~alP~gvv~vv~~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a---~~p~~lElGGk~p~iV~~dADl~~A~ 529 (717)
++ ++|+|++|+|+|+.+.+..|.+|+ ||+|+||||+++|+.|++.+ .+|+++|||||||+||++|||+|.|+
T Consensus 151 ~~----alP~gv~~~v~g~~~~~~~L~~~~-v~~V~fTGS~~~g~~i~~~aa~~~~~v~lElgGknp~iV~~dADld~aa 225 (449)
T cd07136 151 EE----TFDEEYVAVVEGGVEENQELLDQK-FDYIFFTGSVRVGKIVMEAAAKHLTPVTLELGGKSPCIVDEDANLKLAA 225 (449)
T ss_pred HH----hCCCCEEEEEeCChHHHHHHhcCC-CCEEEEECCHHHHHHHHHHHHhcCCCEEEEecCCCeEEECCCCCHHHHH
Confidence 86 499999999996444566666665 99999999999999999877 38999999999999999999999999
Q ss_pred HHHHhhccCCCc-cccccceEEEcCcccChhhHHHHHHHHHHcCce-----------------------------EecCc
Q 005041 530 NIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGVG-----------------------------LFGGP 579 (717)
Q Consensus 530 ~~i~~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~~-----------------------------~~g~~ 579 (717)
+.+++++|.|+| .|+|++|+|||+++| |+|+++|+++++++... ++|+.
T Consensus 226 ~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~L~~~~~~~~~g~p~~~~~~gpli~~~~~~~i~~~i~~a~~~~gG~ 304 (449)
T cd07136 226 KRIVWGKFLNAGQTCVAPDYVLVHESVK-EKFIKELKEEIKKFYGEDPLESPDYGRIINEKHFDRLAGLLDNGKIVFGGN 304 (449)
T ss_pred HHHHHHHHcccCCcccCCCEEEEcHHHH-HHHHHHHHHHHHHhcCCCCCCCCCccCcCCHHHHHHHHHHHhcceEEECCC
Confidence 999999999987 999999999999999 89999999999886210 12332
Q ss_pred cc-cc-cc-c-C-----CCCccccccccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEecCHHHHHHHHhcCCeeeEEE
Q 005041 580 RA-SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFH 650 (717)
Q Consensus 580 ~~-~~-~~-p-i-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~v~i 650 (717)
.. .+ ++ | | ++|.+++||+||||++|++|+|+||||+++|+++|||++||||+|..++.++++++++|+|+|
T Consensus 305 ~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~~~~eai~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~v 384 (449)
T cd07136 305 TDRETLYIEPTILDNVTWDDPVMQEEIFGPILPVLTYDTLDEAIEIIKSRPKPLALYLFSEDKKVEKKVLENLSFGGGCI 384 (449)
T ss_pred cCCCCCEEeeEEEecCCCcChHHhccccCCeeEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEE
Confidence 21 13 33 5 2 358999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCC--CCCCccCCccccccccCcccccccchhhcccEEEEEEecC
Q 005041 651 NASTRF--CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGN 696 (717)
Q Consensus 651 N~~~~~--~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v~~~~ 696 (717)
|+.+.. .+..||||.+.||+|. ++|.+|+++||+.|+|+++.
T Consensus 385 N~~~~~~~~~~~PfGG~k~SG~G~----~~g~~~l~~~t~~k~v~~~~ 428 (449)
T cd07136 385 NDTIMHLANPYLPFGGVGNSGMGS----YHGKYSFDTFSHKKSILKKS 428 (449)
T ss_pred CCccccccCCCCCccCcCcccCCc----ccCHHHHHHhccceEEEEcC
Confidence 987643 3568999999999863 56899999999999998864
No 81
>TIGR03240 arg_catab_astD succinylglutamic semialdehyde dehydrogenase. Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism.
Probab=100.00 E-value=5.6e-71 Score=623.11 Aligned_cols=396 Identities=16% Similarity=0.114 Sum_probs=330.4
Q ss_pred HHHhcCCcceEEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhh
Q 005041 270 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 349 (717)
Q Consensus 270 ~~~~tg~~iGT~i~a~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~ 349 (717)
.+|.+++.++++..++ .+|+++++++|++||++|+++|.++|.++|++++++|++|+++|++++++|.+++..
T Consensus 18 ~~P~t~~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~- 90 (484)
T TIGR03240 18 TNPATQEVLWQGAAAS------AAQVEAAVAAARAAFPAWARLSLEERIAVVQRFAALLEERKEALARVIARETGKPLW- 90 (484)
T ss_pred ECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH-
Confidence 5688999999988888 899999999999999999999999999999999999999999999998877765432
Q ss_pred chhHHHHHHhhcChhHHHHHHHHHHHHhcccc-cccccccccccCCCceEEEeecceeEEEEEcCC-Cch-hHHHHHHHH
Q 005041 350 GYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 426 (717)
Q Consensus 350 g~~~a~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~A 426 (717)
++ ..|+..+++.+++++...+ ..+..... . .+...+++++|+|||++|+|| ||. +.++++++|
T Consensus 91 ---~a--------~~ev~~~~~~~~~~~~~~~~~~g~~~~~--~-~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~i~~A 156 (484)
T TIGR03240 91 ---ET--------RTEVASMIGKVAISIKAYHERTGESENP--M-PDGRAVLRHRPHGVVAVFGPYNFPGHLPNGHIVPA 156 (484)
T ss_pred ---HH--------HHHHHHHHHHHHHHHHHHHHhcCccccC--C-CCceeEEEEecccEEEEECCCchHHHHHHHHHHHH
Confidence 11 1245555555554433221 12322111 1 223457889999999999998 685 567899999
Q ss_pred HHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecCCChhhhhhcCCCCccEEEeecCHHHHHHHHhhc--
Q 005041 427 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST-- 503 (717)
Q Consensus 427 LaaGN~vVlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a-- 503 (717)
|++||+||+|||+.||+|+..+++++++ + +|+|+||+|+|+.++++.|..||+||+|+||||+++|+.|++.+
T Consensus 157 LaaGN~VVlKPs~~tp~t~~~l~~~~~~----aGlP~gvv~~v~g~~~~~~~L~~~~~vd~V~fTGS~~~G~~i~~~aa~ 232 (484)
T TIGR03240 157 LLAGNTVVFKPSELTPWVAEETVKLWEK----AGLPAGVLNLVQGARETGVALAAHPDIDGLLFTGSSNTGHLLHRQFAG 232 (484)
T ss_pred HHcCCEEEEECCccccHHHHHHHHHHHH----hCcCcccEEEEeCCHHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhhh
Confidence 9999999999999999999999999987 7 99999999997656788888999999999999999999998875
Q ss_pred --CCCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcc-cChhhHHHHHHHHHHcCce-----
Q 005041 504 --KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDL-ACNGALNELVVELQHEGVG----- 574 (717)
Q Consensus 504 --~~p~~lElGGk~p~iV~~dADl~~A~~~i~~~~~~n~g-~C~a~~rv~V~~~i-~d~~f~~~l~~~~~~~~~~----- 574 (717)
.+|++||||||||+||++|||+|.|++.+++++|.|+| .|+|++|||||+++ | |+|+++|+++++++.+.
T Consensus 233 ~~~~~~~lElGGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~~~~-d~f~~~l~~~~~~~~~g~~~~~ 311 (484)
T TIGR03240 233 RPEKILALEMGGNNPLIVDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPDGAQG-DAFLARLVEVAERLTVGAWDAE 311 (484)
T ss_pred cCCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeccccH-HHHHHHHHHHHHhcccCCCCcC
Confidence 26799999999999999999999999999999999987 99999999999998 7 69999999988765211
Q ss_pred ------------------------------E-ecCcc--ccc-cc-c-C----CCCccccccccCceEEEEEeCCHHHHH
Q 005041 575 ------------------------------L-FGGPR--ASK-LL-Q-I----PETRLFHHEYNSMVCTVEIVDDVRAAI 614 (717)
Q Consensus 575 ------------------------------~-~g~~~--~~~-~~-p-i----~~~~~~~eE~FGPVl~v~~~~~~deAi 614 (717)
+ .|+.. ..+ |+ | | ++|++++||+||||++|++|+|+||||
T Consensus 312 ~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~i~PTvl~v~~~~~i~~eE~FGPVl~v~~~~~~~eai 391 (484)
T TIGR03240 312 PQPFMGAVISLQAAQRLLAAQAKLLALGGKSLLAMRQLDPGAALLTPGIIDVTGVAELPDEEHFGPLLQVIRYDDFDEAI 391 (484)
T ss_pred CCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCEEEcCEEEccCCCCHHHhCCCcCCeEEEEEeCCHHHHH
Confidence 1 11111 112 33 5 3 358899999999999999999999999
Q ss_pred HHHHhcCCCceeEEEecCHHHHHHHHhcCCeeeEEEcCCCCC-CCCCccCCccccccccCcccccccchhhcccEEEEEE
Q 005041 615 DHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRF-CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 693 (717)
Q Consensus 615 ~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~v~iN~~~~~-~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v~ 693 (717)
+++|+++|||++||||+|.++++++++++++|+|+||++... .+.+||||.+.||+|. ++|.+++ +|++.|+++
T Consensus 392 ~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~~pfGG~~~SG~g~----~~g~~~~-~~~~~~~~~ 466 (484)
T TIGR03240 392 AIANNTRFGLSAGLLSDDRELYDRFLLEIRAGIVNWNKPLTGASSAAPFGGIGASGNHR----PSAYYAA-DYCAYPVAS 466 (484)
T ss_pred HHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEECCCCCCCCCCCcCCcccccCCC----CCchHHH-hheeeeEEE
Confidence 999999999999999999999999999999999999987543 3568999999999863 4565554 499999999
Q ss_pred ecC
Q 005041 694 RGN 696 (717)
Q Consensus 694 ~~~ 696 (717)
++.
T Consensus 467 ~~~ 469 (484)
T TIGR03240 467 LEA 469 (484)
T ss_pred Eec
Confidence 875
No 82
>cd07092 ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like. NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency.
Probab=100.00 E-value=4.6e-71 Score=620.59 Aligned_cols=396 Identities=17% Similarity=0.198 Sum_probs=337.8
Q ss_pred HHHhcCCcceEEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhh
Q 005041 270 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 349 (717)
Q Consensus 270 ~~~~tg~~iGT~i~a~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~ 349 (717)
.+|.+++.++++..++ .+|+++++++|++||+.|+++|.++|.++|++++++|++++++|++++.+|++++..
T Consensus 2 ~~P~t~~~i~~~~~~~------~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~~~~l~~~~~~l~~~~~~e~Gk~~~- 74 (450)
T cd07092 2 VDPATGEEIATVPDAS------AADVDAAVAAAHAAFPSWRRTTPAERSKALLKLADAIEENAEELAALESRNTGKPLH- 74 (450)
T ss_pred cCCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHH-
Confidence 3578999999998888 899999999999999999999999999999999999999999999998877655431
Q ss_pred chhHHHHHHhhcChhHHHHHHHHHHHHhcccccc-cccccccccCCCceEEEeecceeEEEEEcCC-Cch-hHHHHHHHH
Q 005041 350 GYAKSLVSRLALKPGKISSLAKSIRILADMEEPI-GQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 426 (717)
Q Consensus 350 g~~~a~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~A 426 (717)
++. ..|+..+++.+++++...+.. +...+ .. ..+...+++|+|+|||++|+|| ||. +.++++++|
T Consensus 75 ---~~~-------~~ev~~~i~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~A 142 (450)
T cd07092 75 ---LVR-------DDELPGAVDNFRFFAGAARTLEGPAAG-EY-LPGHTSMIRREPIGVVAQIAPWNYPLMMAAWKIAPA 142 (450)
T ss_pred ---HHH-------HHHHHHHHHHHHHHHHHHHHhcCcccC-cc-CCCceeEEEEeccceEEEECCCCcHHHHHHHHHHHH
Confidence 111 235677777777776543322 21111 11 1233457889999999999998 786 457999999
Q ss_pred HHhCCEEEEeCCcchHHHHHHHHHHHHHhcccccCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHhhc--
Q 005041 427 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDTVGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST-- 503 (717)
Q Consensus 427 LaaGN~vVlKps~~tp~t~~~l~~~~~~al~~alP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a-- 503 (717)
|++||+||+|||+.+|+|+.++.+++++ .+|+|++|+|++ ++++++.|..||++|+|+||||+.+|+.|++.+
T Consensus 143 L~aGN~VIlKps~~~~~~~~~l~~~~~~----glP~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~v~~~a~~ 218 (450)
T cd07092 143 LAAGNTVVLKPSETTPLTTLLLAELAAE----VLPPGVVNVVCGGGASAGDALVAHPRVRMVSLTGSVRTGKKVARAAAD 218 (450)
T ss_pred HHcCCEEEEECCccchHHHHHHHHHHHh----cCCcccEEEeecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhh
Confidence 9999999999999999999999999985 599999999995 455778888899999999999999999999877
Q ss_pred -CCCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccChhhHHHHHHHHHHcCc--------
Q 005041 504 -KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV-------- 573 (717)
Q Consensus 504 -~~p~~lElGGk~p~iV~~dADl~~A~~~i~~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~-------- 573 (717)
.+|+++|||||||+||++|||+|.|++.+++|+|.|+| .|+|++|+|||+++| |+|+++|+++++++++
T Consensus 219 ~~~~~~lelgG~~p~iV~~dAdl~~aa~~iv~~~~~~~GQ~C~a~~~v~V~~~i~-~~f~~~l~~~~~~~~~g~p~~~~~ 297 (450)
T cd07092 219 TLKRVHLELGGKAPVIVFDDADLDAAVAGIATAGYYNAGQDCTAACRVYVHESVY-DEFVAALVEAVSAIRVGDPDDEDT 297 (450)
T ss_pred cCCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhhCCCCCCCCcEEEEeHHHH-HHHHHHHHHHHhhCCcCCCCCCCC
Confidence 38999999999999999999999999999999999987 999999999999999 8999999999987632
Q ss_pred -------------------------eE-ecCccc--cc-cc-c-C-----CCCccccccccCceEEEEEeCCHHHHHHHH
Q 005041 574 -------------------------GL-FGGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHI 617 (717)
Q Consensus 574 -------------------------~~-~g~~~~--~~-~~-p-i-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~a 617 (717)
++ .|+... .+ ++ | | ++|++++||+||||++|++|+|+||||+++
T Consensus 298 ~~gpli~~~~~~~i~~~i~~a~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~ 377 (450)
T cd07092 298 EMGPLNSAAQRERVAGFVERAPAHARVLTGGRRAEGPGYFYEPTVVAGVAQDDEIVQEEIFGPVVTVQPFDDEDEAIELA 377 (450)
T ss_pred ccCcccCHHHHHHHHHHHHHHHcCCEEEeCCCCCCCCccEEeeEEEEcCCCCChHHhCCCcCceEEEEEECCHHHHHHHH
Confidence 11 122221 12 33 5 2 358999999999999999999999999999
Q ss_pred HhcCCCceeEEEecCHHHHHHHHhcCCeeeEEEcCCCCCCCCCccCCccccccccCcccccccchhhcccEEEEEE
Q 005041 618 HQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 693 (717)
Q Consensus 618 N~~~~GL~a~I~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v~ 693 (717)
|+++|||++||||+|.+++.++++++++|.|+||+.....+.+||||.+.||+| +++|++|+++||+.|++.
T Consensus 378 n~~~~gL~~~vft~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~PfgG~~~SG~G----~~~g~~~~~~~~~~k~~~ 449 (450)
T cd07092 378 NDVEYGLASSVWTRDVGRAMRLSARLDFGTVWVNTHIPLAAEMPHGGFKQSGYG----KDLSIYALEDYTRIKHVM 449 (450)
T ss_pred hCCCCCceEEEECCCHHHHHHHHHhcCccEEEECCCCCCCCCCCcCCcccCcCC----CCChHHHHHHHheeeEEe
Confidence 999999999999999999999999999999999998777777999999999986 246899999999999985
No 83
>cd07099 ALDH_DDALDH Methylomonas sp. 4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid.
Probab=100.00 E-value=5.5e-71 Score=620.46 Aligned_cols=395 Identities=18% Similarity=0.159 Sum_probs=331.9
Q ss_pred HHhcCCcceEEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhhc
Q 005041 271 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAG 350 (717)
Q Consensus 271 ~~~tg~~iGT~i~a~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~g 350 (717)
+|.+|+.++++...+ .+|+++++++|++||+.|++++.++|.++|++++++|++|+++|++++++|+|++..
T Consensus 2 ~P~t~~~~~~~~~~~------~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~-- 73 (453)
T cd07099 2 NPATGEVLGEVPVTD------PAEVAAAVARARAAQRAWAALGVEGRAQRLLRWKRALADHADELAELLHAETGKPRA-- 73 (453)
T ss_pred CCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHH--
Confidence 578899999998888 899999999999999999999999999999999999999999999999888765532
Q ss_pred hhHHHHHHhhcChhHHHHHHHHHHHHhccccc-ccc-cccccccCCCceEEEeecceeEEEEEcCC-Cch-hHHHHHHHH
Q 005041 351 YAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQ-ILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 426 (717)
Q Consensus 351 ~~~a~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~A 426 (717)
++ ..|+..+++.+++++...+. .+. ..+......+...+++++|+|||++|+|| +|. +.+++++||
T Consensus 74 --~~--------~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~l~~A 143 (453)
T cd07099 74 --DA--------GLEVLLALEAIDWAARNAPRVLAPRKVPTGLLMPNKKATVEYRPYGVVGVISPWNYPLLTPMGDIIPA 143 (453)
T ss_pred --HH--------HHHHHHHHHHHHHHHHHHHHhcCCccccCcccCCCceeEEEEecceEEEEECCCChHHHHHHHHHHHH
Confidence 11 12445555555555433221 111 11110001234567899999999999998 686 567899999
Q ss_pred HHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecCCChhhhhhcCCCCccEEEeecCHHHHHHHHhhc--
Q 005041 427 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST-- 503 (717)
Q Consensus 427 LaaGN~vVlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a-- 503 (717)
|++||+||+|||+.+|+++..+++++.+ + +|+|++|+|+|..++++.|.+| +||+|+||||+++|+.|++.+
T Consensus 144 LaaGN~vilKps~~~p~~~~~l~~~l~~----ag~P~g~~~vv~g~~~~~~~l~~~-~vd~V~ftGs~~~g~~i~~~aa~ 218 (453)
T cd07099 144 LAAGNAVVLKPSEVTPLVGELLAEAWAA----AGPPQGVLQVVTGDGATGAALIDA-GVDKVAFTGSVATGRKVMAAAAE 218 (453)
T ss_pred HHcCCEEEEECCccchHHHHHHHHHHHH----cCCCCCeEEEEeCCchHHHHHhcC-CCCEEEEECCHHHHHHHHHHHHh
Confidence 9999999999999999999999999987 7 9999999999644567777777 599999999999999999877
Q ss_pred -CCCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccChhhHHHHHHHHHHcCc--------
Q 005041 504 -KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV-------- 573 (717)
Q Consensus 504 -~~p~~lElGGk~p~iV~~dADl~~A~~~i~~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~-------- 573 (717)
.+|+++|||||||+||++|||++.|++.+++++|.|+| .|+|++|||||+++| |+|+++|+++++++.+
T Consensus 219 ~~~~~~lelgG~~p~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~ri~V~~~i~-d~f~~~l~~~~~~l~~G~~~~~~~ 297 (453)
T cd07099 219 RLIPVVLELGGKDPMIVLADADLERAAAAAVWGAMVNAGQTCISVERVYVHESVY-DEFVARLVAKARALRPGADDIGDA 297 (453)
T ss_pred cCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHH-HHHHHHHHHHHHhccCCCCCCCCC
Confidence 48999999999999999999999999999999999987 999999999999999 8999999999887521
Q ss_pred --------------------------eE-ecCccc--cc-cc-c-C-----CCCccccccccCceEEEEEeCCHHHHHHH
Q 005041 574 --------------------------GL-FGGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDH 616 (717)
Q Consensus 574 --------------------------~~-~g~~~~--~~-~~-p-i-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~ 616 (717)
++ .|+.+. .+ ++ | | ++|++++||+||||++|++|+|+||||++
T Consensus 298 ~~gp~i~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptil~~~~~~~~~~~~E~FgPvl~v~~~~~~~eai~~ 377 (453)
T cd07099 298 DIGPMTTARQLDIVRRHVDDAVAKGAKALTGGARSNGGGPFYEPTVLTDVPHDMDVMREETFGPVLPVMPVADEDEAIAL 377 (453)
T ss_pred cccCCcCHHHHHHHHHHHHHHHhCCCEEEeCCCcCCCCCeEEecEEEecCCCCCHHHhCCCcCCeeEEEeeCCHHHHHHH
Confidence 12 244332 23 33 5 3 35889999999999999999999999999
Q ss_pred HHhcCCCceeEEEecCHHHHHHHHhcCCeeeEEEcCCCCC--CCCCccCCccccccccCcccccccchhhcccEEEEEE
Q 005041 617 IHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRF--CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 693 (717)
Q Consensus 617 aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~v~iN~~~~~--~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v~ 693 (717)
+|+++|||++||||+|.++++++++++++|.|+||+++.. .+..||||.+.||+| +++|.+|+++||+.|++.
T Consensus 378 ~n~~~~gL~~~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~g----~~~g~~~~~~~t~~k~v~ 452 (453)
T cd07099 378 ANDSRYGLSASVFSRDLARAEAIARRLEAGAVSINDVLLTAGIPALPFGGVKDSGGG----RRHGAEGLREFCRPKAIA 452 (453)
T ss_pred HhCCCCCCeEEEEcCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCCCCCCcccccCC----ccChHHHHHHhcceEEEe
Confidence 9999999999999999999999999999999999987543 467899999999875 357999999999999975
No 84
>cd07112 ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like. NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD.
Probab=100.00 E-value=3e-71 Score=622.26 Aligned_cols=396 Identities=19% Similarity=0.202 Sum_probs=336.6
Q ss_pred HHHhcCCcceEEEecCCcccccHhhHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
Q 005041 270 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSR--RLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQ 347 (717)
Q Consensus 270 ~~~~tg~~iGT~i~a~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~ 347 (717)
.+|++++.++++..++ .+|+++++++|++||+ .|+++|.++|.++|++++++|++|+++|++++++|+|++.
T Consensus 7 ~~P~t~~~i~~~~~~~------~~~v~~av~~a~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~ 80 (462)
T cd07112 7 INPATGRVLAEVAACD------AADVDRAVAAARRAFESGVWSRLSPAERKAVLLRLADLIEAHRDELALLETLDMGKPI 80 (462)
T ss_pred ECCCCCCEEEEEeCCC------HHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcH
Confidence 4578999999998888 8999999999999998 4999999999999999999999999999999988876653
Q ss_pred hhchhHHHHHHhhcChhHHHHHHHHHHHHhccccc-ccccccccccCCCceEEEeecceeEEEEEcCC-Cch-hHHHHHH
Q 005041 348 EAGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIAS 424 (717)
Q Consensus 348 ~~g~~~a~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~ 424 (717)
. ++. ..|+..+++.+++++...+. .+...+. ..+...+++|+|+|||++|+|| ||. +.+++++
T Consensus 81 ~----~a~-------~~ev~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~GvV~~i~p~N~P~~~~~~~~~ 146 (462)
T cd07112 81 S----DAL-------AVDVPSAANTFRWYAEAIDKVYGEVAPT---GPDALALITREPLGVVGAVVPWNFPLLMAAWKIA 146 (462)
T ss_pred H----HHH-------HHHHHHHHHHHHHHHHHHHHhcCceecC---CCCeEEEEEEeeeeeEEEECCCchHHHHHHHHHH
Confidence 2 221 12455555555555543321 2222111 1234567789999999999998 685 5679999
Q ss_pred HHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHhh
Q 005041 425 LAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKES 502 (717)
Q Consensus 425 ~ALaaGN~vVlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~ 502 (717)
|||++||+||+|||+.+|+|+..+++++.+ + +|+|++|+|++ ++++++.|..||++|+|+||||+++|+.|++.
T Consensus 147 ~ALaaGN~Vv~Kps~~~p~~~~~l~~~~~~----aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~ 222 (462)
T cd07112 147 PALAAGNSVVLKPAEQSPLTALRLAELALE----AGLPAGVLNVVPGFGHTAGEALGLHMDVDALAFTGSTEVGRRFLEY 222 (462)
T ss_pred HHHHcCCeeeeeCCCCCCHHHHHHHHHHHh----cCCCCCcEEEEeCCCchHHHHHhcCCCcCEEEEECCHHHHHHHHHH
Confidence 999999999999999999999999999986 7 99999999996 66788889999999999999999999999875
Q ss_pred c----CCCEEEecCCcceEEEcCCC-CHHHHHHHHHhhccCCCc-cccccceEEEcCcccChhhHHHHHHHHHHcCc---
Q 005041 503 T----KIPVLGHADGICHVYVDKSA-NLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV--- 573 (717)
Q Consensus 503 a----~~p~~lElGGk~p~iV~~dA-Dl~~A~~~i~~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~--- 573 (717)
+ .||+++|||||||+||++|| |+|.|++.+++++|.|+| .|+|++|||||+++| |+|+++|+++++++.+
T Consensus 223 aa~~~~~~~~lelgG~n~~iV~~da~dl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~-~~f~~~l~~~~~~~~~g~p 301 (462)
T cd07112 223 SGQSNLKRVWLECGGKSPNIVFADAPDLDAAAEAAAAGIFWNQGEVCSAGSRLLVHESIK-DEFLEKVVAAAREWKPGDP 301 (462)
T ss_pred HHHhcCCEEEecCCCCCeEEECCCCcCHHHHHHHHHHHHHhccCCCCCCCeeEEEcHHHH-HHHHHHHHHHHhcCCcCCC
Confidence 5 38999999999999999999 999999999999999986 999999999999999 8999999999876521
Q ss_pred -------------------------------eE-ecCccc----cc-cc-c-C-----CCCccccccccCceEEEEEeCC
Q 005041 574 -------------------------------GL-FGGPRA----SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDD 609 (717)
Q Consensus 574 -------------------------------~~-~g~~~~----~~-~~-p-i-----~~~~~~~eE~FGPVl~v~~~~~ 609 (717)
++ .|+... .+ ++ | | +++++++||+||||++|++|+|
T Consensus 302 ~~~~~~~gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~ 381 (462)
T cd07112 302 LDPATRMGALVSEAHFDKVLGYIESGKAEGARLVAGGKRVLTETGGFFVEPTVFDGVTPDMRIAREEIFGPVLSVITFDS 381 (462)
T ss_pred CCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCCeEEeeEEecCCCCCChHHhCCCCCceEEEEEeCC
Confidence 22 233321 13 33 5 2 3689999999999999999999
Q ss_pred HHHHHHHHHhcCCCceeEEEecCHHHHHHHHhcCCeeeEEEcCCCCCCCCCccCCccccccccCcccccccchhhcccEE
Q 005041 610 VRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTT 689 (717)
Q Consensus 610 ~deAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~ 689 (717)
+||||+++|+++|||++||||+|.+++.++++++++|.|+||++....+..||||.++||+| +++|++|+++||+.
T Consensus 382 ~~eai~~~n~~~~gL~~~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~PfgG~k~SG~G----~~~g~~~~~~f~~~ 457 (462)
T cd07112 382 EEEAVALANDSVYGLAASVWTSDLSRAHRVARRLRAGTVWVNCFDEGDITTPFGGFKQSGNG----RDKSLHALDKYTEL 457 (462)
T ss_pred HHHHHHHHhCCCccceEEEEcCCHHHHHHHHHhcCcceEEECCCCCCCCCCCCCCcccccCC----ccchHHHHHHHhce
Confidence 99999999999999999999999999999999999999999997766677899999999986 35699999999999
Q ss_pred EEEEe
Q 005041 690 RWILR 694 (717)
Q Consensus 690 k~v~~ 694 (717)
|++++
T Consensus 458 k~i~~ 462 (462)
T cd07112 458 KTTWI 462 (462)
T ss_pred eEEEC
Confidence 99863
No 85
>TIGR01722 MMSDH methylmalonic acid semialdehyde dehydrogenase. In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus.
Probab=100.00 E-value=7.3e-71 Score=621.56 Aligned_cols=399 Identities=15% Similarity=0.134 Sum_probs=337.3
Q ss_pred HHHHhcCCcceEEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHh
Q 005041 269 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 348 (717)
Q Consensus 269 l~~~~tg~~iGT~i~a~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~ 348 (717)
..+|.+++.++++..++ .+|+++++++|++||+.|+++|.++|.++|++++++|++++++|++++..|.|++..
T Consensus 20 ~~~P~t~~~i~~~~~~~------~~~v~~ai~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~ 93 (477)
T TIGR01722 20 VTNPATNEVTTKVAFAS------VDEVDAAVASARETFLTWGQTSLAQRTSVLLRYQALLKEHRDEIAELITAEHGKTHS 93 (477)
T ss_pred eeCCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHH
Confidence 46788999999998888 899999999999999999999999999999999999999999999998877665421
Q ss_pred hchhHHHHHHhhcChhHHHHHHHHHHHHhccccc-ccccccccccCCCceEEEeecceeEEEEEcCC-Cch-hHHHHHHH
Q 005041 349 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 425 (717)
Q Consensus 349 ~g~~~a~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ 425 (717)
++ ..|+...++.+++++...+. .+...+. ...+...+.+++|+|||++|+|| ||. +.++++++
T Consensus 94 ----~a--------~~ev~~~i~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ 159 (477)
T TIGR01722 94 ----DA--------LGDVARGLEVVEHACGVNSLLKGETSTQ--VATRVDVYSIRQPLGVCAGITPFNFPAMIPLWMFPI 159 (477)
T ss_pred ----HH--------HHHHHHHHHHHHHHHHHHHHhcCccccc--CCCCceEEEEEcccceEEEEccCChHHHHHHHHHHH
Confidence 22 23666677777776644332 2222211 01233457789999999999998 686 45699999
Q ss_pred HHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecCCChhhhhhcCCCCccEEEeecCHHHHHHHHhhc-
Q 005041 426 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST- 503 (717)
Q Consensus 426 ALaaGN~vVlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a- 503 (717)
||++||+||+|||+++|+++..+++++.+ + +|+|++|+|+|..+.++.|..||+|++|+||||+++|+.|++.+
T Consensus 160 ALaaGN~VilKps~~~p~~~~~l~~~l~~----aglP~g~~~~v~g~~~~~~~L~~~~~v~~V~ftGS~~~g~~v~~~a~ 235 (477)
T TIGR01722 160 AIACGNTFVLKPSEKVPSAAVKLAELFSE----AGAPDGVLNVVHGDKEAVDRLLEHPDVKAVSFVGSTPIGRYIHTTGS 235 (477)
T ss_pred HHhcCCEEEeeCcccChHHHHHHHHHHHH----hCcCCCeEEEEeCCHHHHHHHHcCCCcCEEEEECCHHHHHHHHHHHH
Confidence 99999999999999999999999999987 7 99999999996545667778899999999999999999998876
Q ss_pred --CCCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccChhhHHHHHHHHHHcC--------
Q 005041 504 --KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEG-------- 572 (717)
Q Consensus 504 --~~p~~lElGGk~p~iV~~dADl~~A~~~i~~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~-------- 572 (717)
.||+++|||||||+||++|||+|.|++.+++++|.|+| .|++++|+|||+++ | +|+++|+++++++.
T Consensus 236 ~~~~~v~lElGG~n~~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~rl~v~~~~-~-~f~~~l~~~~~~~~~G~~~~~~ 313 (477)
T TIGR01722 236 AHGKRVQALGGAKNHMVVMPDADKDAAADALVGAAYGAAGQRCMAISAAVLVGAA-D-EWVPEIRERAEKIRIGPGDDPG 313 (477)
T ss_pred hcCCeEEEECCCCCceEECCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEeCcH-H-HHHHHHHHHHhcCCCCCCCCCC
Confidence 38999999999999999999999999999999999987 99999999999997 5 99999999987652
Q ss_pred --------------------------ceEe-cCccc------cc-cc-c-C-----CCCccccccccCceEEEEEeCCHH
Q 005041 573 --------------------------VGLF-GGPRA------SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVR 611 (717)
Q Consensus 573 --------------------------~~~~-g~~~~------~~-~~-p-i-----~~~~~~~eE~FGPVl~v~~~~~~d 611 (717)
++++ |+... .+ |+ | | ++|.+++||+||||++|++|+|+|
T Consensus 314 ~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~il~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~V~~~~~~~ 393 (477)
T TIGR01722 314 AEMGPLITPQAKDRVASLIAGGAAEGAEVLLDGRGYKVDGYEEGNWVGPTLLERVPPTMKAYQEEIFGPVLCVLEADTLE 393 (477)
T ss_pred CCcCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCCCeEECCEEeeCCCCCChhhhCCCCCCeEEEEEeCCHH
Confidence 1222 33221 12 33 6 2 358899999999999999999999
Q ss_pred HHHHHHHhcCCCceeEEEecCHHHHHHHHhcCCeeeEEEcCCCCCC-CCCccCCccccccccCcccccccchhhcccEEE
Q 005041 612 AAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFC-DGARFGLGAEVGISTSRIHARGPVGVEGLLTTR 690 (717)
Q Consensus 612 eAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~v~iN~~~~~~-~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k 690 (717)
|||+++|+++|||++||||+|.+++++|++++++|.|+||++.... +.+||||.+.||+| +.+++|.+|+++||+.|
T Consensus 394 eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~k~SG~G--~~~~~g~~~l~~~~~~k 471 (477)
T TIGR01722 394 EAIALINASPYGNGTAIFTRDGAAARRFQHEIEVGQVGVNVPIPVPLPYFSFTGWKDSFFG--DHHIYGKQGTHFYTRGK 471 (477)
T ss_pred HHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCCCCccccccCC--CCccChHHHHHHhcCee
Confidence 9999999999999999999999999999999999999999865443 56899999999985 33456899999999999
Q ss_pred EEEec
Q 005041 691 WILRG 695 (717)
Q Consensus 691 ~v~~~ 695 (717)
++.++
T Consensus 472 ~i~~~ 476 (477)
T TIGR01722 472 TVTTR 476 (477)
T ss_pred EEEEe
Confidence 99875
No 86
>cd07111 ALDH_F16 Aldehyde dehydrogenase family 16A1-like. Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence.
Probab=100.00 E-value=3.8e-71 Score=621.83 Aligned_cols=385 Identities=19% Similarity=0.221 Sum_probs=330.2
Q ss_pred HHHHhcCCcceEEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHh
Q 005041 269 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 348 (717)
Q Consensus 269 l~~~~tg~~iGT~i~a~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~ 348 (717)
..+|.+++.++++..++ .+|+++++++|++||+.|+++|.++|.++|++++++|++|+++|++++++|++++..
T Consensus 41 ~~nP~t~~~i~~~~~a~------~~~v~~ai~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ 114 (480)
T cd07111 41 TINPATGEVLASVLQAE------EEDVDAAVAAARTAFESWSALPGHVRARHLYRIARHIQKHQRLFAVLESLDNGKPIR 114 (480)
T ss_pred eECCCCCCEEEEEcCCC------HHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH
Confidence 46788999999988778 899999999999999999999999999999999999999999999998877765432
Q ss_pred hchhHHHHHHhhcChhHHHHHHHHHHHHhcccccccccccccccCCCceEEEeecceeEEEEEcCC-Cch-hHHHHHHHH
Q 005041 349 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 426 (717)
Q Consensus 349 ~g~~~a~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~A 426 (717)
++. ..++...++.+++++...+... + .+..++|+|||++|+|| ||. +.++++++|
T Consensus 115 ----~a~-------~~ev~~~~~~~~~~~~~~~~~~----------~--~~~~~~P~GVV~~I~PwN~P~~~~~~~i~~A 171 (480)
T cd07111 115 ----ESR-------DCDIPLVARHFYHHAGWAQLLD----------T--ELAGWKPVGVVGQIVPWNFPLLMLAWKICPA 171 (480)
T ss_pred ----HHH-------HHHHHHHHHHHHHHHHHHHHhc----------C--CcccceecceEEEECCCccHHHHHHHHHHHH
Confidence 221 1245556666666554322110 1 12457999999999998 686 567999999
Q ss_pred HHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecCCChhhhhhcCCCCccEEEeecCHHHHHHHHhhc--
Q 005041 427 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST-- 503 (717)
Q Consensus 427 LaaGN~vVlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a-- 503 (717)
|++||+||+|||+.||+|+..+++++.+ + ||+|++|+|++..+++..|..||++|+|+||||+.+|+.|++.+
T Consensus 172 LaaGN~VVlKps~~tp~~~~~l~~~~~~----aGlP~gvv~~v~g~~~~~~~l~~~~~v~~v~ftGs~~~g~~v~~~aa~ 247 (480)
T cd07111 172 LAMGNTVVLKPAEYTPLTALLFAEICAE----AGLPPGVLNIVTGNGSFGSALANHPGVDKVAFTGSTEVGRALRRATAG 247 (480)
T ss_pred HHcCCEEEEECCCCChHHHHHHHHHHHh----cCCCcccEEEEeCCchHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhc
Confidence 9999999999999999999999999986 7 99999999996546788888999999999999999999998876
Q ss_pred -CCCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccChhhHHHHHHHHHHcCc--------
Q 005041 504 -KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV-------- 573 (717)
Q Consensus 504 -~~p~~lElGGk~p~iV~~dADl~~A~~~i~~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~-------- 573 (717)
.+|+++|||||||+||++|||+|.|++.+++++|.|+| .|++++|||||+++| |+|+++|+++++++.+
T Consensus 248 ~~~~~~lElGGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~a~~ri~V~~~i~-d~f~~~l~~~~~~~~vg~p~~~~~ 326 (480)
T cd07111 248 TGKKLSLELGGKSPFIVFDDADLDSAVEGIVDAIWFNQGQVCCAGSRLLVQESVA-EELIRKLKERMSHLRVGDPLDKAI 326 (480)
T ss_pred cCCcEEEEcCCCceEEECCCCCHHHHHHHHHHHHHhcCCCcCcCCceEEEcHHHH-HHHHHHHHHHHHhcCCCCCCCCCC
Confidence 38999999999999999999999999999999999976 999999999999999 8999999999887532
Q ss_pred --------------------------eEe-cCccc--ccc-c-c-C-----CCCccccccccCceEEEEEeCCHHHHHHH
Q 005041 574 --------------------------GLF-GGPRA--SKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDH 616 (717)
Q Consensus 574 --------------------------~~~-g~~~~--~~~-~-p-i-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~ 616 (717)
.+. |+... .++ + | | ++|++++||+||||++|++|+|+||||++
T Consensus 327 ~~gpli~~~~~~~v~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~deai~~ 406 (480)
T cd07111 327 DMGAIVDPAQLKRIRELVEEGRAEGADVFQPGADLPSKGPFYPPTLFTNVPPASRIAQEEIFGPVLVVLTFRTAKEAVAL 406 (480)
T ss_pred ccccccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEeeEEEecCCCCChhhcCCCCCCeeEeecCCCHHHHHHH
Confidence 111 22111 122 3 5 2 35889999999999999999999999999
Q ss_pred HHhcCCCceeEEEecCHHHHHHHHhcCCeeeEEEcCCCCCCCCCccCCccccccccCcccccccchhhcccEEEE
Q 005041 617 IHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRW 691 (717)
Q Consensus 617 aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~ 691 (717)
+|+++|||++||||+|.+++.++++++++|+|+||++....+..||||.+.||+| +++|.+|+++||+.|+
T Consensus 407 ~n~~~~gL~~~i~t~d~~~~~~~~~~l~aG~v~iN~~~~~~~~~PfGG~k~SG~G----~~~g~~~~~~~~~~k~ 477 (480)
T cd07111 407 ANNTPYGLAASVWSENLSLALEVALSLKAGVVWINGHNLFDAAAGFGGYRESGFG----REGGKEGLYEYLRPSW 477 (480)
T ss_pred HhCCCCCceEEEEcCCHHHHHHHHHhCCEeeEEECCCCCCCCCCCcCCcccccCC----ccchHHHHHHHhhccC
Confidence 9999999999999999999999999999999999998776677899999999986 3569999999999985
No 87
>cd07121 ALDH_EutE Ethanolamine utilization protein EutE-like. Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), converts acetaldehyde into acetyl-CoA. This CD is limited to such monofunctional enzymes as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium. Mutations in eutE abolish the ability to utilize ethanolamine as a carbon source.
Probab=100.00 E-value=4.7e-71 Score=611.61 Aligned_cols=372 Identities=17% Similarity=0.206 Sum_probs=302.7
Q ss_pred HhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhhchhHHHHHHhhcChhHHHHHHH
Q 005041 292 QVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAK 371 (717)
Q Consensus 292 ~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~g~~~a~~~~~~~~~~~i~~~~~ 371 (717)
-+|+++++++|++||+.|+++|.++|.++|++++++|++|.++|++++++|.|++.. ++. +.
T Consensus 3 ~~~v~~av~~A~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~----~~~--------------~~ 64 (429)
T cd07121 3 FATVDDAVAAAKAAQKQYRKCTLADREKIIEAIREALLSNAEELAEMAVEETGMGRV----EDK--------------IA 64 (429)
T ss_pred hhhHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH----HHH--------------HH
Confidence 479999999999999999999999999999999999999999999998877655421 111 11
Q ss_pred HHHHHhccccccccc-c-cccccCCCceEEEeecceeEEEEEcCC-Cch-hHHHHHHHHHHhCCEEEEeCCcchHHHHHH
Q 005041 372 SIRILADMEEPIGQI-L-KRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAI 447 (717)
Q Consensus 372 ~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGN~vVlKps~~tp~t~~~ 447 (717)
.+++++.... +.. . +......+...+++|+|+|||++|+|| ||. +.++++++||++||+||+||||.||+|+.+
T Consensus 65 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKpse~tp~t~~~ 142 (429)
T cd07121 65 KNHLAAEKTP--GTEDLTTTAWSGDNGLTLVEYAPFGVIGAITPSTNPTETIINNSISMLAAGNAVVFNPHPGAKKVSAY 142 (429)
T ss_pred HHHHHHHhcC--cccccccccccCCCcceEEEEcccceEEEEccCCCchhHHHHHHHHHHHcCCCEEEECCccchhHHHH
Confidence 2222221110 100 0 000001122356788999999999998 795 567999999999999999999999999999
Q ss_pred HHHHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHhhcCCCEEEecCCcceEEEcCCCCH
Q 005041 448 LHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANL 525 (717)
Q Consensus 448 l~~~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a~~p~~lElGGk~p~iV~~dADl 525 (717)
+++++++++.++ +|+|++|+|++ +.++++.|..||+||+|+||||+++|+.|++. .||+++|||||||+||++||||
T Consensus 143 l~~l~~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~I~fTGs~~~g~~v~~~-~k~~~lelGGk~p~iV~~dADl 221 (429)
T cd07121 143 AVELINKAIAEAGGPDNLVVTVEEPTIETTNELMAHPDINLLVVTGGPAVVKAALSS-GKKAIGAGAGNPPVVVDETADI 221 (429)
T ss_pred HHHHHHHHHHHcCCCcceEEEecCCChHHHHHHHcCCCccEEEeeCCHHHHHHHHhC-CCceEeecCCCceEEEecCCCH
Confidence 999999888888 99999999996 55677788889999999999999999999876 5999999999999999999999
Q ss_pred HHHHHHHHhhccCCCc-cccccceEEEcCcccChhhHHHHHHHHHHc----------------------CceE-ecCcc-
Q 005041 526 DVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHE----------------------GVGL-FGGPR- 580 (717)
Q Consensus 526 ~~A~~~i~~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~----------------------~~~~-~g~~~- 580 (717)
|+|++.+++|+|.|+| +|+|++|+|||++|| |+|+++|+++ ..+ +.++ .|+..
T Consensus 222 d~Aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~-d~f~~~L~~~-~~~~i~~~~~~~v~~~i~~a~~~~~ga~~~~gg~~~ 299 (429)
T cd07121 222 EKAARDIVQGASFDNNLPCIAEKEVIAVDSVA-DYLIAAMQRN-GAYVLNDEQAEQLLEVVLLTNKGATPNKKWVGKDAS 299 (429)
T ss_pred HHHHHHHHhcccccCCCCCCccceEEEeHHHH-HHHHHHHHHC-CCEEcCHHHHHHHHHhhcccCCCccccccccCcCHH
Confidence 9999999999999987 999999999999999 8999999876 211 0111 12211
Q ss_pred -c---cccc-----c-C-----CCCccccccccCceEEEEEeCCHHHHHHHHHhcCCCc--eeEEEecCHHHHHHHHhcC
Q 005041 581 -A---SKLL-----Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAH--TDCIVAEDQKVAETFLCQV 643 (717)
Q Consensus 581 -~---~~~~-----p-i-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL--~a~I~t~d~~~a~~~~~~l 643 (717)
. .+++ | | ++|++++||+||||++|++|+|+||||+++|+++||| ++||||+|.+++++|++++
T Consensus 300 ~~~~~~G~~~~~~~ptil~~v~~~~~i~~eE~FgPVl~v~~~~~~~eAi~~an~~~~GLghsa~I~t~d~~~a~~~a~~l 379 (429)
T cd07121 300 KILKAAGIEVPADIRLIIVETDKDHPFVVEEQMMPILPVVRVKNFDEAIELAVELEHGNRHTAIIHSKNVENLTKMARAM 379 (429)
T ss_pred HHHHHcCCCCCCCCeEEEEecCCCCCccccccccceEEEEEeCCHHHHHHHHHhhccCCCceEEEecCCHHHHHHHHhhC
Confidence 0 1322 3 2 3589999999999999999999999999999999999 9999999999999999999
Q ss_pred CeeeEEEcCCCCCCCCCccCCccccccccCcccccccchhhcccEEEEEEe
Q 005041 644 DSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILR 694 (717)
Q Consensus 644 ~~G~v~iN~~~~~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v~~ 694 (717)
++|+||||.++. ..+||||.+.|+++- +|++| +..+..|++..
T Consensus 380 ~aG~v~iN~~~~--~~~p~gG~k~s~~~~-----~~~~~-~~~~~~~~~~~ 422 (429)
T cd07121 380 QTTIFVKNGPSY--AGLGVGGEGYTTFTI-----AGPTG-EGLTSARTFTR 422 (429)
T ss_pred CceEEEEcCCCc--CccccCCCccceEEe-----cCCcC-cCccChhhhhe
Confidence 999999998754 568999988887732 35555 56666666554
No 88
>cd07135 ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins. Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD.
Probab=100.00 E-value=1.3e-70 Score=611.00 Aligned_cols=383 Identities=21% Similarity=0.213 Sum_probs=315.6
Q ss_pred HhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhhchhHHHHHHhhcChhHHHHHHH
Q 005041 292 QVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAK 371 (717)
Q Consensus 292 ~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~g~~~a~~~~~~~~~~~i~~~~~ 371 (717)
.+|+++|+++|++||+.|++++..+|.++|++++++|++|+++|++++++|+|++.. ++...++..+.+.+++++.
T Consensus 4 ~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~----e~~~~ev~~~~~~~~~~a~ 79 (436)
T cd07135 4 LDEIDSIHSRLRATFRSGKTKDLEYRLWQLKQLYWAVKDNEEAIVEALKKDLGRPPF----ETLLTEVSGVKNDILHMLK 79 (436)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHH----HHhHHHHHHHHHHHHHHHH
Confidence 789999999999999999999999999999999999999999999999988876532 2222222222333444444
Q ss_pred HHHHHhcccccccccccccccCCCceEEEeecceeEEEEEcCC-Cch-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHH
Q 005041 372 SIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILH 449 (717)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~ 449 (717)
.++.+........... . ..+...+++++|+|||++|+|| ||. +.++++++||++||+||+|||+.+|+|+..++
T Consensus 80 ~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~l~ 155 (436)
T cd07135 80 NLKKWAKDEKVKDGPL---A-FMFGKPRIRKEPLGVVLIIGPWNYPVLLALSPLVGAIAAGCTVVLKPSELTPHTAALLA 155 (436)
T ss_pred HHHHhhCCcccCCccc---c-cCCCceEEEeccCcEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCccChHHHHHHH
Confidence 4433321111100000 0 0123457789999999999998 686 67899999999999999999999999999999
Q ss_pred HHHHHhcccccCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHhhc---CCCEEEecCCcceEEEcCCCCH
Q 005041 450 KVITSAIPDTVGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST---KIPVLGHADGICHVYVDKSANL 525 (717)
Q Consensus 450 ~~~~~al~~alP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a---~~p~~lElGGk~p~iV~~dADl 525 (717)
+++++ .||+|++|+|++ ++++++ |..|| +|+|+||||+.+|+.|++.+ .+|+++|||||||+||++|||+
T Consensus 156 ~l~~~----~lP~g~v~vv~g~~~~~~~-l~~~~-vd~v~ftGs~~~g~~i~~~aa~~~~~~~lelgG~~~~iV~~dADl 229 (436)
T cd07135 156 ELVPK----YLDPDAFQVVQGGVPETTA-LLEQK-FDKIFYTGSGRVGRIIAEAAAKHLTPVTLELGGKSPVIVTKNADL 229 (436)
T ss_pred HHHHH----hCCcCEEEEEcCCchhHHH-HHhCC-CCEEEEECCcHHHHHHHHHHHhcCCCeEEEccCCCcEEECCCCCH
Confidence 99986 599999999995 556666 55688 99999999999999998876 3899999999999999999999
Q ss_pred HHHHHHHHhhccCCCc-cccccceEEEcCcccChhhHHHHHHHHHHcCce------------------------------
Q 005041 526 DVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGVG------------------------------ 574 (717)
Q Consensus 526 ~~A~~~i~~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~~------------------------------ 574 (717)
|.|++.+++++|.|+| .|+|++|+|||+++| |+|+++|+++++++.+.
T Consensus 230 ~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~g~p~~~~~~gpli~~~~~~~i~~~v~~ag~~ 308 (436)
T cd07135 230 ELAAKRILWGKFGNAGQICVAPDYVLVDPSVY-DEFVEELKKVLDEFYPGGANASPDYTRIVNPRHFNRLKSLLDTTKGK 308 (436)
T ss_pred HHHHHHHHHHHhccCCceecCCCEEeccHHHH-HHHHHHHHHHHHHhcCCCCCCCCCcCCCCCHHHHHHHHHHHHhcCCe
Confidence 9999999999999987 999999999999999 89999999998765211
Q ss_pred E-ecCccc-cc-cc-c-C-----CCCccccccccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEecCHHHHHHHHhcCC
Q 005041 575 L-FGGPRA-SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVD 644 (717)
Q Consensus 575 ~-~g~~~~-~~-~~-p-i-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~ 644 (717)
+ .|+... .+ |+ | | +++++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.+++++++
T Consensus 309 v~~gg~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~deai~~an~~~~gL~~~v~t~d~~~a~~~~~~l~ 388 (436)
T cd07135 309 VVIGGEMDEATRFIPPTIVSDVSWDDSLMSEELFGPVLPIIKVDDLDEAIKVINSRDTPLALYIFTDDKSEIDHILTRTR 388 (436)
T ss_pred EEECCCcCCCCCEEccEEEecCCCccHHHhccccCCceEEEecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHhcCC
Confidence 1 122221 12 33 5 2 358899999999999999999999999999999999999999999999999999999
Q ss_pred eeeEEEcCCCCC--CCCCccCCccccccccCcccccccchhhcccEEEEEE
Q 005041 645 SAAVFHNASTRF--CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 693 (717)
Q Consensus 645 ~G~v~iN~~~~~--~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v~ 693 (717)
+|.|+||++... .+..||||.+.||+| +++|.+|+++||+.|+|.
T Consensus 389 ~g~v~iN~~~~~~~~~~~PfGG~k~SG~G----~~~g~~~l~~~t~~k~i~ 435 (436)
T cd07135 389 SGGVVINDTLIHVGVDNAPFGGVGDSGYG----AYHGKYGFDTFTHERTVV 435 (436)
T ss_pred cCeEEECCccccccCCCCCcCCcCcccCC----ccccHhHHHHhccccccc
Confidence 999999987543 367899999999986 246899999999999874
No 89
>cd07137 ALDH_F3FHI Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins. Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress.
Probab=100.00 E-value=1.4e-70 Score=610.05 Aligned_cols=375 Identities=21% Similarity=0.242 Sum_probs=310.7
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhhchhHHHHHHhhcChhHHHHHHHHHHHH
Q 005041 297 EMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRIL 376 (717)
Q Consensus 297 ~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~g~~~a~~~~~~~~~~~i~~~~~~~~~~ 376 (717)
+++++|++||+.|+.++..+|.++|++++++|++|+|+|++++++|+|++. .++... |+..+++.++++
T Consensus 3 ~a~~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~----~~a~~~-------ev~~~~~~~~~~ 71 (432)
T cd07137 3 RLVRELRETFRSGRTRSAEWRKSQLKGLLRLVDENEDDIFAALRQDLGKPS----AESFRD-------EVSVLVSSCKLA 71 (432)
T ss_pred HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCH----HHHHHH-------HHHHHHHHHHHH
Confidence 488999999999999999999999999999999999999999998887653 222222 444445555544
Q ss_pred hccccc-ccc-c--ccccccCCCceEEEeecceeEEEEEcCC-Cch-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHH
Q 005041 377 ADMEEP-IGQ-I--LKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHK 450 (717)
Q Consensus 377 ~~~~~~-~~~-~--~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~ 450 (717)
+..... .+. . .+... .....+++|+|+|||++|+|| ||. +.++++++||++||+||+|||+.||+|+.++++
T Consensus 72 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~r~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~tp~~~~~l~~ 149 (432)
T cd07137 72 IKELKKWMAPEKVKTPLTT--FPAKAEIVSEPLGVVLVISAWNFPFLLSLEPVIGAIAAGNAVVLKPSELAPATSALLAK 149 (432)
T ss_pred HHHHHHHhCCcccCCCccc--CCceeEEEEecCcEEEEEcCCchHHHHHHHHHHHHHhcCCEEEEECCCcChHHHHHHHH
Confidence 432211 111 0 11101 122457789999999999998 685 567999999999999999999999999999999
Q ss_pred HHHHhcccccCcCceEEecCCChhhhhhcCCCCccEEEeecCHHHHHHHHhhc---CCCEEEecCCcceEEEcCCCCHHH
Q 005041 451 VITSAIPDTVGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST---KIPVLGHADGICHVYVDKSANLDV 527 (717)
Q Consensus 451 ~~~~al~~alP~gvv~vv~~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a---~~p~~lElGGk~p~iV~~dADl~~ 527 (717)
++.+ ++|+|++|+|+|+.+.++.|..| ++|+|+||||+++|+.|++.+ .||+++|||||||+||++|||+|.
T Consensus 150 ~~~~----~~P~gvv~~v~g~~~~~~~L~~~-~i~~v~fTGs~~~g~~v~~~aa~~~~~~~lElgG~np~iV~~dAdl~~ 224 (432)
T cd07137 150 LIPE----YLDTKAIKVIEGGVPETTALLEQ-KWDKIFFTGSPRVGRIIMAAAAKHLTPVTLELGGKCPVIVDSTVDLKV 224 (432)
T ss_pred HHHH----hCCcCeEEEEeCCHHHHHHHHhC-CCCEEEEECChHHHHHHHHHHHhcCCcEEEEccCCCcEEEcCCCCHHH
Confidence 9986 59999999999754566666666 599999999999999998877 499999999999999999999999
Q ss_pred HHHHHHhhcc-CCCc-cccccceEEEcCcccChhhHHHHHHHHHHcCc--------------------------------
Q 005041 528 AKNIVIDAKI-DYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV-------------------------------- 573 (717)
Q Consensus 528 A~~~i~~~~~-~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~-------------------------------- 573 (717)
|++.+++|+| .|+| .|+|++|+|||+++| |+|+++|+++++++..
T Consensus 225 aa~~i~~~~f~~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~g~p~~~~~~gpli~~~~~~~v~~~i~~a~~ga 303 (432)
T cd07137 225 AVRRIAGGKWGCNNGQACIAPDYVLVEESFA-PTLIDALKNTLEKFFGENPKESKDLSRIVNSHHFQRLSRLLDDPSVAD 303 (432)
T ss_pred HHHHHHHHhhhccCCCcccCCCEEEEcHHHH-HHHHHHHHHHHHHHhCCCCCccCCcCCcCCHHHHHHHHHHHHHHHhCC
Confidence 9999999999 4776 999999999999999 8999999998887521
Q ss_pred eE-ecCccc-ccc-c-c-C-----CCCccccccccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEecCHHHHHHHHhcC
Q 005041 574 GL-FGGPRA-SKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQV 643 (717)
Q Consensus 574 ~~-~g~~~~-~~~-~-p-i-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l 643 (717)
.+ .|+... .++ + | | ++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++
T Consensus 304 ~~l~gg~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l 383 (432)
T cd07137 304 KIVHGGERDEKNLYIEPTILLDPPLDSSIMTEEIFGPLLPIITVKKIEESIEIINSRPKPLAAYVFTKNKELKRRIVAET 383 (432)
T ss_pred eEEeCCCcCCCCCEEeeEEEecCCCcchhhhcccccCceEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhC
Confidence 11 233321 233 3 5 2 35899999999999999999999999999999999999999999999999999999
Q ss_pred CeeeEEEcCCCCC--CCCCccCCccccccccCcccccccchhhcccEEEEEEe
Q 005041 644 DSAAVFHNASTRF--CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILR 694 (717)
Q Consensus 644 ~~G~v~iN~~~~~--~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v~~ 694 (717)
++|.|+||+++.. .+.+||||.+.||+| +++|.+++++||+.|+|++
T Consensus 384 ~~G~v~iN~~~~~~~~~~~PfGG~k~SG~G----~~~g~~~l~~f~~~k~v~~ 432 (432)
T cd07137 384 SSGGVTFNDTVVQYAIDTLPFGGVGESGFG----AYHGKFSFDAFSHKKAVLY 432 (432)
T ss_pred CcCcEEECCccccccCCCCCCCCcCcCcCC----ccccHHHHHHhccCceeeC
Confidence 9999999987643 367899999999986 3468999999999999864
No 90
>cd07105 ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-like. Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD.
Probab=100.00 E-value=1.6e-70 Score=612.12 Aligned_cols=378 Identities=21% Similarity=0.250 Sum_probs=321.3
Q ss_pred hHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhhchhHHHHHHhhcChhHHHHHHHHH
Q 005041 294 GAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSI 373 (717)
Q Consensus 294 ~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~g~~~a~~~~~~~~~~~i~~~~~~~ 373 (717)
|+++++++|++||+.|+++|.++|.++|++++++|++|.++|++++++|+|++.. ++ ..++..+++.+
T Consensus 1 ~v~~ai~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~----~~--------~~ei~~~~~~l 68 (432)
T cd07105 1 DADQAVEAAAAAFPAWSKTPPSERRDILLKAADLLESRRDEFIEAMMEETGATAA----WA--------GFNVDLAAGML 68 (432)
T ss_pred CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHhCCCHH----HH--------HHHHHHHHHHH
Confidence 5789999999999999999999999999999999999999999999888766521 11 23566677777
Q ss_pred HHHhcccccc-cccccccccCCCceEEEeecceeEEEEEcCC-Cch-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHH
Q 005041 374 RILADMEEPI-GQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHK 450 (717)
Q Consensus 374 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~ 450 (717)
++++...+.. +...+.. ..+...+++++|+|||++|+|| ||. ++++++++||++||+||+|||+.+|+|+..+++
T Consensus 69 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~ 146 (432)
T cd07105 69 REAASLITQIIGGSIPSD--KPGTLAMVVKEPVGVVLGIAPWNAPVILGTRAIAYPLAAGNTVVLKASELSPRTHWLIGR 146 (432)
T ss_pred HHHHHHHHHhcCeecccC--CCCceeEEEEecceEEEEECCcCcHHHHHHHHHHHHHhcCCEEEEECCccChHHHHHHHH
Confidence 7776543321 2222211 1234567889999999999998 685 567999999999999999999999999999999
Q ss_pred HHHHhcccc-cCcCceEEecCC----ChhhhhhcCCCCccEEEeecCHHHHHHHHhhc---CCCEEEecCCcceEEEcCC
Q 005041 451 VITSAIPDT-VGEKLIGLVTSR----EEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST---KIPVLGHADGICHVYVDKS 522 (717)
Q Consensus 451 ~~~~al~~a-lP~gvv~vv~~~----~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a---~~p~~lElGGk~p~iV~~d 522 (717)
++.+ + +|+|++|+|++. .++++.|..||+||+|+||||+++|+.|++.+ .+|+++|||||||+||++|
T Consensus 147 ~~~~----aGlP~gv~~~v~g~~~~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElgGk~p~iV~~d 222 (432)
T cd07105 147 VFHE----AGLPKGVLNVVTHSPEDAPEVVEALIAHPAVRKVNFTGSTRVGRIIAETAAKHLKPVLLELGGKAPAIVLED 222 (432)
T ss_pred HHHH----cCcCCCcEEEEeCCCCchHHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeEEEeCCCCCceEECCC
Confidence 9986 7 999999999852 24678888899999999999999999999876 3899999999999999999
Q ss_pred CCHHHHHHHHHhhccCCCc-cccccceEEEcCcccChhhHHHHHHHHHHcC-----------------------------
Q 005041 523 ANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEG----------------------------- 572 (717)
Q Consensus 523 ADl~~A~~~i~~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~----------------------------- 572 (717)
||+|.|++.+++++|.|+| .|++++|+|||+++| |+|+++|+++++++.
T Consensus 223 adl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~-~~f~~~l~~~~~~~~~g~~~~gp~i~~~~~~~~~~~i~~a~~~g 301 (432)
T cd07105 223 ADLDAAANAALFGAFLNSGQICMSTERIIVHESIA-DEFVEKLKAAAEKLFAGPVVLGSLVSAAAADRVKELVDDALSKG 301 (432)
T ss_pred CCHHHHHHHHHHHHHhcCCCCCcCCceEEEcHHHH-HHHHHHHHHHHHhhcCCCCcccccCCHHHHHHHHHHHHHHHHCC
Confidence 9999999999999999987 999999999999999 899999999987542
Q ss_pred ceE-ecCccc---cc-cc-c-C-----CCCccccccccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEecCHHHHHHHH
Q 005041 573 VGL-FGGPRA---SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFL 640 (717)
Q Consensus 573 ~~~-~g~~~~---~~-~~-p-i-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~I~t~d~~~a~~~~ 640 (717)
.++ .|+... .+ ++ | | ++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++++
T Consensus 302 a~~~~gg~~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~deai~~~n~~~~gL~~~v~t~d~~~~~~~~ 381 (432)
T cd07105 302 AKLVVGGLADESPSGTSMPPTILDNVTPDMDIYSEESFGPVVSIIRVKDEEEAVRIANDSEYGLSAAVFTRDLARALAVA 381 (432)
T ss_pred CEEEeCCCcCCCCCCeEEeeEEEecCCCCCHHHhCCCcCCeEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHH
Confidence 222 244332 23 33 5 2 35889999999999999999999999999999999999999999999999999
Q ss_pred hcCCeeeEEEcCCCCC-CCCCccCCccccccccCcccccccchhhcccEEEEEEe
Q 005041 641 CQVDSAAVFHNASTRF-CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILR 694 (717)
Q Consensus 641 ~~l~~G~v~iN~~~~~-~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v~~ 694 (717)
+++++|.|+||+++.. .+.+||||.+.||+|. ++|.+|+++||+.|+|.+
T Consensus 382 ~~l~~g~v~vN~~~~~~~~~~PfgG~~~SG~G~----~~g~~~l~~~~~~k~v~~ 432 (432)
T cd07105 382 KRIESGAVHINGMTVHDEPTLPHGGVKSSGYGR----FNGKWGIDEFTETKWITI 432 (432)
T ss_pred HhCCcCeEEECCCCCCCCCCCCCCCcccccccc----cChHHHHHHhhceEEEeC
Confidence 9999999999997654 4678999999999862 469999999999999863
No 91
>cd07146 ALDH_PhpJ Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like. Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD.
Probab=100.00 E-value=1.9e-70 Score=613.51 Aligned_cols=396 Identities=20% Similarity=0.213 Sum_probs=331.0
Q ss_pred HHHhcCCcceEEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhh
Q 005041 270 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 349 (717)
Q Consensus 270 ~~~~tg~~iGT~i~a~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~ 349 (717)
.+|++|+.++++..++ .+++++++++|+++ |+++|.++|.++|++++++|++|+++|++++++|.|++..
T Consensus 4 ~~P~tg~~i~~~~~~~------~~~v~~av~~A~~~---~~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~- 73 (451)
T cd07146 4 RNPYTGEVVGTVPAGT------EEALREALALAASY---RSTLTRYQRSAILNKAAALLEARREEFARLITLESGLCLK- 73 (451)
T ss_pred cCCCCCCEEEEEcCCC------HHHHHHHHHHHHHH---HhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHH-
Confidence 4688999999988888 89999999998875 9889999999999999999999999999998887765432
Q ss_pred chhHHHHHHhhcChhHHHHHHHHHHHHhccccc-ccccccccc--cCCCceEEEeecceeEEEEEcCC-Cch-hHHHHHH
Q 005041 350 GYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTE--LADGLILEKTSCPLGVLLIVFES-RPD-ALVQIAS 424 (717)
Q Consensus 350 g~~~a~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~ 424 (717)
++ ..|+..+++.+++++..... .++..+... ...+...+++++|+|||++|+|| ||. +.+++++
T Consensus 74 ---~a--------~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~ 142 (451)
T cd07146 74 ---DT--------RYEVGRAADVLRFAAAEALRDDGESFSCDLTANGKARKIFTLREPLGVVLAITPFNHPLNQVAHKIA 142 (451)
T ss_pred ---HH--------HHHHHHHHHHHHHHHHHHHHhcCcccccccccCCCCceEEEEEeccceEEEEccCChHHHHHHHHHH
Confidence 22 23566666666666543221 122111100 01234467889999999999998 685 5679999
Q ss_pred HHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHhh
Q 005041 425 LAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKES 502 (717)
Q Consensus 425 ~ALaaGN~vVlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~ 502 (717)
+||++||+||+|||+.||+|+..+.+++++ + +|+|++|+|++ +.++++.|..||+||+|+||||+.+|+.|++.
T Consensus 143 ~ALaaGN~VilKps~~~p~~~~~l~~~l~~----aglP~g~v~~v~g~~~~~~~~l~~~~~i~~V~fTGs~~~g~~i~~~ 218 (451)
T cd07146 143 PAIAANNRIVLKPSEKTPLSAIYLADLLYE----AGLPPDMLSVVTGEPGEIGDELITHPDVDLVTFTGGVAVGKAIAAT 218 (451)
T ss_pred HHHHcCCEEEEECCCCchHHHHHHHHHHHH----cCcCccceEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHH
Confidence 999999999999999999999999999987 7 99999999995 55678888899999999999999999999887
Q ss_pred cC-CCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccChhhHHHHHHHHHHcCce------
Q 005041 503 TK-IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGVG------ 574 (717)
Q Consensus 503 a~-~p~~lElGGk~p~iV~~dADl~~A~~~i~~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~~------ 574 (717)
+. +|+++|||||||+||++|||++.|++.+++++|.|+| .|++++|+|||+++| |+|+++|+++++++.+.
T Consensus 219 a~~~~~~lElGG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~l~~g~p~~~~ 297 (451)
T cd07146 219 AGYKRQLLELGGNDPLIVMDDADLERAATLAVAGSYANSGQRCTAVKRILVHESVA-DEFVDLLVEKSAALVVGDPMDPA 297 (451)
T ss_pred hcCCceeeecCCCceEEECCCCCHHHHHHHHHHHHHhhCCCCCCCCceEEEchHHH-HHHHHHHHHHHhcCCCCCCCCCC
Confidence 74 8999999999999999999999999999999999987 999999999999999 89999999999876321
Q ss_pred ----------------------------E-ecCccccccc-c-C-----CCCccccccccCceEEEEEeCCHHHHHHHHH
Q 005041 575 ----------------------------L-FGGPRASKLL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIH 618 (717)
Q Consensus 575 ----------------------------~-~g~~~~~~~~-p-i-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN 618 (717)
+ .|+.....|+ | | ++|++++||+||||++|++|+|+||||+++|
T Consensus 298 ~~~gpli~~~~~~~v~~~v~~a~~~Ga~vl~gg~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n 377 (451)
T cd07146 298 TDMGTVIDEEAAIQIENRVEEAIAQGARVLLGNQRQGALYAPTVLDHVPPDAELVTEETFGPVAPVIRVKDLDEAIAISN 377 (451)
T ss_pred CCcCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCCEEEcCEEeecCCCCCHHHhCCCCCCeEEEEEeCCHHHHHHHHh
Confidence 1 1221111223 5 2 3578999999999999999999999999999
Q ss_pred hcCCCceeEEEecCHHHHHHHHhcCCeeeEEEcCCCCC-CCCCccCCccccccccCcccccccchhhcccEEEEEEe
Q 005041 619 QHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRF-CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILR 694 (717)
Q Consensus 619 ~~~~GL~a~I~t~d~~~a~~~~~~l~~G~v~iN~~~~~-~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v~~ 694 (717)
+++|||++||||+|.++++++++++++|+|+||+.... .+..||||.|.||+++ +++|++|+++||+.|++.+
T Consensus 378 ~~~~gL~~~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~~g---~~~g~~~~~~f~~~k~~~~ 451 (451)
T cd07146 378 STAYGLSSGVCTNDLDTIKRLVERLDVGTVNVNEVPGFRSELSPFGGVKDSGLGG---KEGVREAMKEMTNVKTYSL 451 (451)
T ss_pred CCCCCceEEEECCCHHHHHHHHHHCCcceEEECCCCCCCCCCCCcCcccccCCCc---ccChHHHHHHHhceeEEeC
Confidence 99999999999999999999999999999999986544 3568999999998631 3467999999999999863
No 92
>cd07114 ALDH_DhaS Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like. Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD.
Probab=100.00 E-value=1.4e-70 Score=617.32 Aligned_cols=396 Identities=20% Similarity=0.231 Sum_probs=338.8
Q ss_pred HHHhcCCcceEEEecCCcccccHhhHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
Q 005041 270 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSR--RLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQ 347 (717)
Q Consensus 270 ~~~~tg~~iGT~i~a~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~ 347 (717)
.+|.+|+.++++..++ .+++++++++|++||+ .|+++|.++|.++|++++++|.+++++|++++++|.|++.
T Consensus 2 ~~P~tg~~i~~~~~~~------~~~v~~av~~a~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~ 75 (457)
T cd07114 2 INPATGEPWARVPEAS------AADVDRAVAAARAAFEGGAWRKLTPTERGKLLRRLADLIEANAEELAELETRDNGKLI 75 (457)
T ss_pred cCCCCCCEEEEEeCCC------HHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCH
Confidence 3578999999998888 8999999999999997 4999999999999999999999999999998877665442
Q ss_pred hhchhHHHHHHhhcChhHHHHHHHHHHHHhcccccc-cccccccccCCCceEEEeecceeEEEEEcCC-Cch-hHHHHHH
Q 005041 348 EAGYAKSLVSRLALKPGKISSLAKSIRILADMEEPI-GQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIAS 424 (717)
Q Consensus 348 ~~g~~~a~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~ 424 (717)
. + ...++..+++.+++++...+.. +...+. ...+...+++++|+|||++|+|| ||. +.+++++
T Consensus 76 ~----~--------~~~ev~~~~~~~~~~a~~~~~~~~~~~~~--~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~ 141 (457)
T cd07114 76 R----E--------TRAQVRYLAEWYRYYAGLADKIEGAVIPV--DKGDYLNFTRREPLGVVAAITPWNSPLLLLAKKLA 141 (457)
T ss_pred H----H--------HHHHHHHHHHHHHHHHHHHHHhcCccccc--CCCCceEEEEEecceEEEEECCCccHHHHHHHHHH
Confidence 1 1 1236777777787776443322 222111 01234567889999999999998 685 5679999
Q ss_pred HHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHhh
Q 005041 425 LAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKES 502 (717)
Q Consensus 425 ~ALaaGN~vVlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~ 502 (717)
+||++||+||+|||+.+|+++..+++++.+ + +|+|+||+|++ +.+.++.|..|+++++|+||||+.+|+.+++.
T Consensus 142 ~AL~aGN~Vilkps~~~p~~~~~l~~~l~~----aglP~~vv~~v~g~~~~~~~~l~~~~~i~~V~ftGs~~~g~~v~~~ 217 (457)
T cd07114 142 PALAAGNTVVLKPSEHTPASTLELAKLAEE----AGFPPGVVNVVTGFGPETGEALVEHPLVAKIAFTGGTETGRHIARA 217 (457)
T ss_pred HHHhcCCeEEeECCccchHHHHHHHHHHHH----cCcCCCcEEEEeCCCchHHHHHhcCCCCCEEEEECCHHHHHHHHHH
Confidence 999999999999999999999999999987 7 99999999996 55678888889999999999999999999987
Q ss_pred c---CCCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccChhhHHHHHHHHHHcC------
Q 005041 503 T---KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEG------ 572 (717)
Q Consensus 503 a---~~p~~lElGGk~p~iV~~dADl~~A~~~i~~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~------ 572 (717)
+ .||+++|||||||+||++|||++.|++.+++|+|.|+| +|+|++|+|||+++| |+|+++|+++++++.
T Consensus 218 aa~~~~~~~lelgG~~~~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~-~~f~~~l~~~~~~~~~g~p~~ 296 (457)
T cd07114 218 AAENLAPVTLELGGKSPNIVFDDADLDAAVNGVVAGIFAAAGQTCVAGSRLLVQRSIY-DEFVERLVARARAIRVGDPLD 296 (457)
T ss_pred HHhcCCeEEEecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCCCCceEEEcHHHH-HHHHHHHHHHHHhCCCCCCCC
Confidence 7 48999999999999999999999999999999999987 999999999999999 899999999987652
Q ss_pred ----------------------------ceE-ecCccc------cc-cc-c-C-----CCCccccccccCceEEEEEeCC
Q 005041 573 ----------------------------VGL-FGGPRA------SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDD 609 (717)
Q Consensus 573 ----------------------------~~~-~g~~~~------~~-~~-p-i-----~~~~~~~eE~FGPVl~v~~~~~ 609 (717)
+++ +|+... .+ ++ | | +++++++||+||||++|++|+|
T Consensus 297 ~~~~~gpli~~~~~~~~~~~i~~a~~~ga~~l~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~ 376 (457)
T cd07114 297 PETQMGPLATERQLEKVERYVARAREEGARVLTGGERPSGADLGAGYFFEPTILADVTNDMRIAQEEVFGPVLSVIPFDD 376 (457)
T ss_pred CCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCCEECCEEEeCCCCCChhhhcCCcCceEEEeccCC
Confidence 122 244321 12 33 5 2 3588999999999999999999
Q ss_pred HHHHHHHHHhcCCCceeEEEecCHHHHHHHHhcCCeeeEEEcCCCCCCCCCccCCccccccccCcccccccchhhcccEE
Q 005041 610 VRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTT 689 (717)
Q Consensus 610 ~deAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~ 689 (717)
+||||+++|+++|||++||||+|.++++++++++++|.|+||++....+.+||||.+.||+|. ++|.+|+++||+.
T Consensus 377 ~deai~~~n~~~~gL~~~ift~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~k~SG~G~----~~g~~~~~~f~~~ 452 (457)
T cd07114 377 EEEAIALANDSEYGLAAGIWTRDLARAHRVARAIEAGTVWVNTYRALSPSSPFGGFKDSGIGR----ENGIEAIREYTQT 452 (457)
T ss_pred HHHHHHHhhCCCcCceeEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCCCCCccCcCCc----cchHHHHHHHhce
Confidence 999999999999999999999999999999999999999999977777788999999999862 4689999999999
Q ss_pred EEEEe
Q 005041 690 RWILR 694 (717)
Q Consensus 690 k~v~~ 694 (717)
|++.+
T Consensus 453 k~~~~ 457 (457)
T cd07114 453 KSVWI 457 (457)
T ss_pred eEEeC
Confidence 99863
No 93
>PF00171 Aldedh: Aldehyde dehydrogenase family; InterPro: IPR015590 Aldehyde dehydrogenases (1.2.1.3 from EC and 1.2.1.5 from EC) are enzymes that oxidize a wide variety of aliphatic and aromatic aldehydes using NADP as a cofactor. In mammals at least four different forms of the enzyme are known []: class-1 (or Ald C) a tetrameric cytosolic enzyme, class-2 (or Ald M) a tetrameric mitochondrial enzyme, class- 3 (or Ald D) a dimeric cytosolic enzyme, and class IV a microsomal enzyme. Aldehyde dehydrogenases have also been sequenced from fungal and bacterial species. A number of enzymes are known to be evolutionary related to aldehyde dehydrogenases. A glutamic acid and a cysteine residue have been implicated in the catalytic activity of mammalian aldehyde dehydrogenase. These residues are conserved in all the enzymes of this entry. Some of the proteins in this entry are allergens. Allergies are hypersensitivity reactions of the immune system to specific substances called allergens (such as pollen, stings, drugs, or food) that, in most people, result in no symptoms. A nomenclature system has been established for antigens (allergens) that cause IgE-mediated atopic allergies in humans [WHO/IUIS Allergen Nomenclature Subcommittee King T.P., Hoffmann D., Loewenstein H., Marsh D.G., Platts-Mills T.A.E., Thomas W. Bull. World Health Organ. 72:797-806(1994)]. This nomenclature system is defined by a designation that is composed of the first three letters of the genus; a space; the first letter of the species name; a space and an arabic number. In the event that two species names have identical designations, they are discriminated from one another by adding one or more letters (as necessary) to each species designation. The allergens in this family include allergens with the following designations: Alt a 10 and Cla h 3.; GO: 0016491 oxidoreductase activity, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 3R31_A 3HAZ_A 1UXQ_A 1UXP_A 1UXR_A 1UXU_A 1UXN_A 1KY8_A 1UXT_A 1UXV_A ....
Probab=100.00 E-value=3.7e-71 Score=622.73 Aligned_cols=393 Identities=22% Similarity=0.287 Sum_probs=335.1
Q ss_pred HHHhcCCcceEEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhh
Q 005041 270 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 349 (717)
Q Consensus 270 ~~~~tg~~iGT~i~a~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~ 349 (717)
.+|.+++.++++..++ .+|+++++++|++||+.|++++..+|.++|++++++|++|.++|++++..|++++..
T Consensus 12 ~~P~t~~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~- 84 (462)
T PF00171_consen 12 INPATGEVIGEVPSAT------AEDVDRAVEAARAAFKEWSKLPAAERARILERFADLLEERRDELAELIALETGKPIA- 84 (462)
T ss_dssp EETTTECEEEEEEEBS------HHHHHHHHHHHHHHHHHHTTSSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTSSHH-
T ss_pred CCCCCcCEEEEEcCCC------HHHHHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHHHhhcccccccccccccccccc-
Confidence 4477999999999888 899999999999999999999999999999999999999999999999888765432
Q ss_pred chhHHHHHHhhcChhHHHHHHHHHHHHhccccc-ccccccccccCCCceEEEeecceeEEEEEcCC-Cch-hHHHHHHHH
Q 005041 350 GYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 426 (717)
Q Consensus 350 g~~~a~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~A 426 (717)
++ ..++..+++.++++++..+. .++..+. ..+...+++++|+|||++|+|| +|. +.++++++|
T Consensus 85 ---~a--------~~ev~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~A 150 (462)
T PF00171_consen 85 ---EA--------RGEVDRAIDFLRYYADAARKLAGEVLPS---DPGSRNYTRREPLGVVLIITPWNFPLYLAVWKIAPA 150 (462)
T ss_dssp ---HH--------HHHHHHHHHHHHHHHHHHHHHTEEEEEE---STTEEEEEEEEE-SEEEEEE-SSSCTHHHHHHHHHH
T ss_pred ---cc--------cchhhhhhhhhhhhhhcccceehhhccc---ccccccccccccccceeecccccccccccccchhhh
Confidence 22 23566677777777654432 2222221 2466788999999999999998 685 567999999
Q ss_pred HHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHhhc-
Q 005041 427 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST- 503 (717)
Q Consensus 427 LaaGN~vVlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a- 503 (717)
|++||+||+|||+.+|+++.++++++++ + +|+|++|+|++ +.+++..|..||++++|+||||+++|+.|++.+
T Consensus 151 LaaGN~VVlkps~~~~~~~~~l~~~~~~----AglP~gvv~vv~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~a~ 226 (462)
T PF00171_consen 151 LAAGNTVVLKPSEQAPLTALLLAELLEE----AGLPPGVVNVVPGDGSEVGEALVSHPDVDLVSFTGSTATGRAIAKAAA 226 (462)
T ss_dssp HHTT-EEEEEEBTTSHHHHHHHHHHHHH----HTSTTTSEEEECSSTHHHHHHHHHTTTEEEEEEESEHHHHHHHHHHHH
T ss_pred hcccccceeeeccccccccccchhhccc----cccccccccccccccccccceeeeccccceeeecchhhhhhhhhhhcc
Confidence 9999999999999999999999999997 6 99999999996 677888898999999999999999999999877
Q ss_pred --CCCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccChhhHHHHHHHHHHcCc-------
Q 005041 504 --KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------- 573 (717)
Q Consensus 504 --~~p~~lElGGk~p~iV~~dADl~~A~~~i~~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~------- 573 (717)
.+|+++|||||||+||++|||+|.|++.+++|+|.|+| .|++++|||||+++| |+|+++|+++++++.+
T Consensus 227 ~~~~~v~lelgG~~p~iV~~daDld~aa~~iv~~~~~~~GQ~C~a~~~v~V~~~i~-~~f~~~l~~~~~~l~~g~~~~~~ 305 (462)
T PF00171_consen 227 KNLKPVVLELGGKNPVIVDPDADLDKAAEAIVRGAFFNSGQSCTAPSRVLVHESIY-DEFVEALKERVAKLRVGDPLDES 305 (462)
T ss_dssp TTTSEEEEEECEEEEEEE-TTSHHHHHHHHHHHHHHGGGGTSTTSEEEEEEEHHHH-HHHHHHHHHHHHTSEBSSTTSTT
T ss_pred cccccccccccccceeeEecccccccccccccchhccccccccccccccccccccc-chhhhhhhhccccccccCCcccc
Confidence 39999999999999999999999999999999999987 999999999999999 8999999999987521
Q ss_pred ---------------------------eE-ecCc-----cccccc--c-C-----CCCccccccccCceEEEEEeCCHHH
Q 005041 574 ---------------------------GL-FGGP-----RASKLL--Q-I-----PETRLFHHEYNSMVCTVEIVDDVRA 612 (717)
Q Consensus 574 ---------------------------~~-~g~~-----~~~~~~--p-i-----~~~~~~~eE~FGPVl~v~~~~~~de 612 (717)
++ .|+. ...++| | | ++|++++||+||||++|++|+|+||
T Consensus 306 ~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~e 385 (462)
T PF00171_consen 306 TDVGPLISKAQRERVKALIEDAVAEGAKVLCGGEPQEADPENGFFIPPTVLEDVPPDMPIMQEEIFGPVLPVVPYDDLDE 385 (462)
T ss_dssp CSBCHCSSHHHHHHHHHHHHHHHHTTSEEEEETSSSSBCSSSSTEEEEEEEESEHTTSHHHHSC-SSSEEEEEEESSHHH
T ss_pred ccccccccchhhhhcccccccccccccccccccccccccccccccccccccccccccccccccccccccceecccccchh
Confidence 12 2441 112222 5 2 4689999999999999999999999
Q ss_pred HHHHHHhcCCCceeEEEecCHHHHHHHHhcCCeeeEEEcCCCCCCCC-CccCCccccccccCcccccccchhhcccEEEE
Q 005041 613 AIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDG-ARFGLGAEVGISTSRIHARGPVGVEGLLTTRW 691 (717)
Q Consensus 613 Ai~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~-~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~ 691 (717)
||+++|+++|||++||||+|.++++++++++++|+|+||+++..... +||||.+.||+| +++|.+|+++||+.|+
T Consensus 386 ai~~~n~~~~gl~a~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~~~SG~G----~~~g~~~l~~~~~~k~ 461 (462)
T PF00171_consen 386 AIALANDSEYGLTASVFSRDESRAERLARRLEAGRVWINDPPTGDPDGLPFGGFKQSGIG----REGGPEGLDEFTQIKT 461 (462)
T ss_dssp HHHHHHHSSEESEEEEECSBHHHHHHHHHHSTSSEEEESSSSTGGTTSSEBE-SGGGEES----EBSHHHHHHGTEEEEE
T ss_pred hhhcccccCCCceeEEecccccccccccccccccceeecCCcccccccCCCCCcccccCC----cchHHHHHHHhCCccC
Confidence 99999999999999999999999999999999999999998766544 599999999987 3568999999999998
Q ss_pred E
Q 005041 692 I 692 (717)
Q Consensus 692 v 692 (717)
|
T Consensus 462 V 462 (462)
T PF00171_consen 462 V 462 (462)
T ss_dssp E
T ss_pred C
Confidence 6
No 94
>cd07132 ALDH_F3AB Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins. NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes.
Probab=100.00 E-value=2.9e-70 Score=609.87 Aligned_cols=381 Identities=20% Similarity=0.209 Sum_probs=319.1
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhhchhHHHHHHhhcChhHHHHHHHHHHHH
Q 005041 297 EMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRIL 376 (717)
Q Consensus 297 ~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~g~~~a~~~~~~~~~~~i~~~~~~~~~~ 376 (717)
+++++|++||+.|+++|..+|.++|++++++|++|+++|++++++|++++.. ++...++..+..+++++++.++++
T Consensus 2 ~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~----~a~~~ev~~~~~~~~~~~~~~~~~ 77 (443)
T cd07132 2 EAVRRAREAFSSGKTRPLEFRIQQLEALLRMLEENEDEIVEALAKDLRKPKF----EAVLSEILLVKNEIKYAISNLPEW 77 (443)
T ss_pred hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHH----HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4889999999999999999999999999999999999999999998877632 333334444566777777777776
Q ss_pred hcccccccccccccccCCCceEEEeecceeEEEEEcCC-Cch-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHH
Q 005041 377 ADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITS 454 (717)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~~~~~ 454 (717)
...... ..... ..+...+++++|+|||++|+|| ||. +.++++++||++||+||+|||+.+|.|+..+++++.+
T Consensus 78 ~~~~~~-~~~~~----~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~l~~~~~~ 152 (443)
T cd07132 78 MKPEPV-KKNLA----TLLDDVYIYKEPLGVVLIIGAWNYPLQLTLVPLVGAIAAGNCVVIKPSEVSPATAKLLAELIPK 152 (443)
T ss_pred hCCccC-CCccc----cCCCceEEEEecccEEEEEcCCchhHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHH
Confidence 532111 11000 1122357889999999999998 795 6789999999999999999999999999999999986
Q ss_pred hcccccCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHhhc---CCCEEEecCCcceEEEcCCCCHHHHHH
Q 005041 455 AIPDTVGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST---KIPVLGHADGICHVYVDKSANLDVAKN 530 (717)
Q Consensus 455 al~~alP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a---~~p~~lElGGk~p~iV~~dADl~~A~~ 530 (717)
++|+|++|+|++ .++...++ + ++||+|+||||+++|+.|++.+ .+|+++|||||||+||++|||+|.|++
T Consensus 153 ----~lp~gv~~vv~g~~~~~~~l~-~-~~vd~V~fTGs~~~g~~i~~~a~~~~~~~~lElgG~~p~iV~~dADl~~aa~ 226 (443)
T cd07132 153 ----YLDKECYPVVLGGVEETTELL-K-QRFDYIFYTGSTSVGKIVMQAAAKHLTPVTLELGGKSPCYVDKSCDIDVAAR 226 (443)
T ss_pred ----hCCcCeEEEEeCCHHHHHHHH-h-CCCCEEEEECChHHHHHHHHHHHhhCCceEEEcCCCCceEEcCCCCHHHHHH
Confidence 599999999996 44445544 4 4899999999999999998876 399999999999999999999999999
Q ss_pred HHHhhccCCCc-cccccceEEEcCcccChhhHHHHHHHHHHcCc----------------------------e-EecCcc
Q 005041 531 IVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV----------------------------G-LFGGPR 580 (717)
Q Consensus 531 ~i~~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~----------------------------~-~~g~~~ 580 (717)
.+++++|.|+| +|+|++|+|||+++| |+|+++|+++++++.. + +.|+..
T Consensus 227 ~i~~~~f~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~v~~~i~~a~~~~gg~~ 305 (443)
T cd07132 227 RIAWGKFINAGQTCIAPDYVLCTPEVQ-EKFVEALKKTLKEFYGEDPKESPDYGRIINDRHFQRLKKLLSGGKVAIGGQT 305 (443)
T ss_pred HHHHHHHhcCCCceeCCcEEEEcHHHH-HHHHHHHHHHHHHhcCCCCCcccccCCcCCHHHHHHHHHHHhCCEEEeCCcc
Confidence 99999999986 999999999999999 8999999998877521 0 123322
Q ss_pred c-cc-cc-c-C-----CCCccccccccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEecCHHHHHHHHhcCCeeeEEEc
Q 005041 581 A-SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHN 651 (717)
Q Consensus 581 ~-~~-~~-p-i-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~v~iN 651 (717)
. .+ ++ | | ++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.++++++++|.|+||
T Consensus 306 ~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~an~~~~gL~a~i~t~d~~~~~~~~~~l~~G~v~IN 385 (443)
T cd07132 306 DEKERYIAPTVLTDVKPSDPVMQEEIFGPILPIVTVNNLDEAIEFINSREKPLALYVFSNNKKVINKILSNTSSGGVCVN 385 (443)
T ss_pred CCCCCEEeeEEEeCCCCCChHHhccccCceeEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCcceEEEC
Confidence 1 12 33 5 2 3589999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCC--CCCCccCCccccccccCcccccccchhhcccEEEEEEecCc
Q 005041 652 ASTRF--CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNG 697 (717)
Q Consensus 652 ~~~~~--~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v~~~~~ 697 (717)
+.... .+.+||||.+.||+| +++|.+|+++|++.|++.++..
T Consensus 386 ~~~~~~~~~~~PfGG~k~SG~G----~~~g~~~l~~~~~~k~v~~~~~ 429 (443)
T cd07132 386 DTIMHYTLDSLPFGGVGNSGMG----AYHGKYSFDTFSHKRSCLVKSL 429 (443)
T ss_pred CcccccCCCCCCCCCCCcccCC----CcccHHHHHHhccccEEEEccc
Confidence 87643 356899999999986 3568999999999999988753
No 95
>cd07133 ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-like. Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD.
Probab=100.00 E-value=3.1e-70 Score=608.53 Aligned_cols=376 Identities=17% Similarity=0.159 Sum_probs=309.9
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhhchhHHHHHHhhcChhHHHHHHHHHHHHh
Q 005041 298 MAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRILA 377 (717)
Q Consensus 298 av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~g~~~a~~~~~~~~~~~i~~~~~~~~~~~ 377 (717)
.+++|++||+.|+++|..+|.++|++++++|++|++||++++++|+||.. ..++.. .|+...++.+++++
T Consensus 3 ~~~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~---~~ea~~-------~ev~~~i~~~~~~~ 72 (434)
T cd07133 3 LLERQKAAFLANPPPSLEERRDRLDRLKALLLDNQDALAEAISADFGHRS---RHETLL-------AEILPSIAGIKHAR 72 (434)
T ss_pred HHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC---hHHHHH-------HHHHHHHHHHHHHH
Confidence 67889999999999999999999999999999999999999998887521 012211 13334444444444
Q ss_pred ccccc-ccccc-cccccCCCceEEEeecceeEEEEEcCC-Cch-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHH
Q 005041 378 DMEEP-IGQIL-KRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVIT 453 (717)
Q Consensus 378 ~~~~~-~~~~~-~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~~~~ 453 (717)
..... .+... .......+...+++++|+|||++|+|| ||. +++++++|||++||+||+|||+.+|.|+..++++++
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~pwN~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~l~~ 152 (434)
T cd07133 73 KHLKKWMKPSRRHVGLLFLPAKAEVEYQPLGVVGIIVPWNYPLYLALGPLIAALAAGNRVMIKPSEFTPRTSALLAELLA 152 (434)
T ss_pred HHHHHHhCCcccCCccccCCCceEEEEecccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHH
Confidence 32110 11110 000000123457889999999999998 685 678999999999999999999999999999999998
Q ss_pred HhcccccCcCceEEecCCChhhhhhcCCCCccEEEeecCHHHHHHHHhhc---CCCEEEecCCcceEEEcCCCCHHHHHH
Q 005041 454 SAIPDTVGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST---KIPVLGHADGICHVYVDKSANLDVAKN 530 (717)
Q Consensus 454 ~al~~alP~gvv~vv~~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a---~~p~~lElGGk~p~iV~~dADl~~A~~ 530 (717)
+ ++|+|+||+|+|+.++++.|.+|+ +|+|+||||+++|+.|++.+ .||+++|||||||+||++|||++.|++
T Consensus 153 ~----alP~g~~~~v~g~~~~~~~l~~~~-v~~V~ftGs~~~g~~v~~~aa~~~~~~~lElgGk~~~iV~~dadl~~aa~ 227 (434)
T cd07133 153 E----YFDEDEVAVVTGGADVAAAFSSLP-FDHLLFTGSTAVGRHVMRAAAENLTPVTLELGGKSPAIIAPDADLAKAAE 227 (434)
T ss_pred H----hCCcCeEEEEeCChHHHHHHHhCC-CCEEEEeCchHHHHHHHHHHHhcCceEEEEccCCCcEEEeCCCCHHHHHH
Confidence 6 599999999997656778787776 99999999999999999877 389999999999999999999999999
Q ss_pred HHHhhccCCCc-cccccceEEEcCcccChhhHHHHHHHHHHcCc--------------------------------eE-e
Q 005041 531 IVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV--------------------------------GL-F 576 (717)
Q Consensus 531 ~i~~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~--------------------------------~~-~ 576 (717)
.+++++|.|+| .|+|++|+|||+++| |+|+++|+++++++.. ++ .
T Consensus 228 ~i~~~~~~~~GQ~C~a~~rv~V~~~i~-~~f~~~l~~~~~~~~~g~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~ 306 (434)
T cd07133 228 RIAFGKLLNAGQTCVAPDYVLVPEDKL-EEFVAAAKAAVAKMYPTLADNPDYTSIINERHYARLQGLLEDARAKGARVIE 306 (434)
T ss_pred HHHHHHhccCCCcccCCCEEEEcHHHH-HHHHHHHHHHHHHhcCCCCCCCCcCCCCCHHHHHHHHHHHHHHHhCCCEEEe
Confidence 99999999987 999999999999999 8999999999876421 22 2
Q ss_pred cCccc----cc-cc-c-C-----CCCccccccccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEecCHHHHHHHHhcCC
Q 005041 577 GGPRA----SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVD 644 (717)
Q Consensus 577 g~~~~----~~-~~-p-i-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~ 644 (717)
|+... .+ ++ | | ++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++++++++
T Consensus 307 gg~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~ 386 (434)
T cd07133 307 LNPAGEDFAATRKLPPTLVLNVTDDMRVMQEEIFGPILPILTYDSLDEAIDYINARPRPLALYYFGEDKAEQDRVLRRTH 386 (434)
T ss_pred cCCCCcCCCCCcEEeeEEEeCCCCCCcccccccCCCeeEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCC
Confidence 33321 13 33 5 2 358999999999999999999999999999999999999999999999999999999
Q ss_pred eeeEEEcCCCC--CCCCCccCCccccccccCcccccccchhhcccEEEEEE
Q 005041 645 SAAVFHNASTR--FCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 693 (717)
Q Consensus 645 ~G~v~iN~~~~--~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v~ 693 (717)
+|.|+||++.. ..+..||||.+.||+| +++|.+|+++||+.|+|+
T Consensus 387 ~G~v~iN~~~~~~~~~~~PfGG~k~SG~G----~~~g~~~~~~ft~~k~v~ 433 (434)
T cd07133 387 SGGVTINDTLLHVAQDDLPFGGVGASGMG----AYHGKEGFLTFSHAKPVF 433 (434)
T ss_pred cceEEECCcccccCCCCCCcCCCCcccCC----CcCCHHHHHHhcccceec
Confidence 99999998753 2367899999999986 346899999999999874
No 96
>cd07149 ALDH_y4uC Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1. Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD.
Probab=100.00 E-value=5.4e-70 Score=612.93 Aligned_cols=397 Identities=19% Similarity=0.262 Sum_probs=334.2
Q ss_pred HHHhcCCcceEEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhh
Q 005041 270 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 349 (717)
Q Consensus 270 ~~~~tg~~iGT~i~a~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~ 349 (717)
.+|.+|+.++++..++ .+++++++++|++||+.|+++|.++|.++|++++++|+++.++|++++..|++++..
T Consensus 4 ~~P~tg~~~~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~- 76 (453)
T cd07149 4 ISPYDGEVIGRVPVAS------EEDVEKAIAAAKEGAKEMKSLPAYERAEILERAAQLLEERREEFARTIALEAGKPIK- 76 (453)
T ss_pred cCCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCHH-
Confidence 4678899999988888 899999999999999999999999999999999999999999999998887766532
Q ss_pred chhHHHHHHhhcChhHHHHHHHHHHHHhcccc-ccccccccccc--CCCceEEEeecceeEEEEEcCC-Cch-hHHHHHH
Q 005041 350 GYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTEL--ADGLILEKTSCPLGVLLIVFES-RPD-ALVQIAS 424 (717)
Q Consensus 350 g~~~a~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~ 424 (717)
++ ..|+...++.+++++...+ ..++..+.... ..+...+.+++|+|||++|+|| +|. +.+++++
T Consensus 77 ---~a--------~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~ 145 (453)
T cd07149 77 ---DA--------RKEVDRAIETLRLSAEEAKRLAGETIPFDASPGGEGRIGFTIREPIGVVAAITPFNFPLNLVAHKVG 145 (453)
T ss_pred ---HH--------HHHHHHHHHHHHHHHHHHHHhcCccccccccCCCCCeeEEEEeecceEEEEECCCCChHHHHHHHHH
Confidence 21 1245555555555443221 11221111000 1123457789999999999998 686 5679999
Q ss_pred HHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHhh
Q 005041 425 LAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKES 502 (717)
Q Consensus 425 ~ALaaGN~vVlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~ 502 (717)
+||++||+||+|||+.+|+++.++++++++ + +|+|++|+|++ .++++..|..||++|+|+||||+++|+.|++.
T Consensus 146 ~ALaaGN~VI~Kps~~~p~~~~~l~~~l~~----ag~P~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~ 221 (453)
T cd07149 146 PAIAAGNAVVLKPASQTPLSALKLAELLLE----AGLPKGALNVVTGSGETVGDALVTDPRVRMISFTGSPAVGEAIARK 221 (453)
T ss_pred HHHHcCCEEEEECCCcchHHHHHHHHHHHH----cCcCccceEEeecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHH
Confidence 999999999999999999999999999987 7 99999999996 55567888889999999999999999999988
Q ss_pred cC-CCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccChhhHHHHHHHHHHcCc-------
Q 005041 503 TK-IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------- 573 (717)
Q Consensus 503 a~-~p~~lElGGk~p~iV~~dADl~~A~~~i~~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~------- 573 (717)
+. +|+++|||||||+||++|||++.|++.+++++|.|+| .|++++|+|||+++| |+|+++|+++++++.+
T Consensus 222 a~~~~~~lelGGk~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~-d~f~~~L~~~~~~~~~g~p~~~~ 300 (453)
T cd07149 222 AGLKKVTLELGSNAAVIVDADADLEKAVERCVSGAFANAGQVCISVQRIFVHEDIY-DEFLERFVAATKKLVVGDPLDED 300 (453)
T ss_pred cCCCceeeecCCCceEEECCCCCHHHHHHHHHHHHHHhcCCCCCCCceEEEcHhHH-HHHHHHHHHHHHhCCcCCCCCCC
Confidence 75 8999999999999999999999999999999999986 999999999999999 8999999999887632
Q ss_pred ---------------------------eE-ecCccccccc-c-C-----CCCccccccccCceEEEEEeCCHHHHHHHHH
Q 005041 574 ---------------------------GL-FGGPRASKLL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIH 618 (717)
Q Consensus 574 ---------------------------~~-~g~~~~~~~~-p-i-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN 618 (717)
++ .|+.....++ | | +++++++||+||||++|++|+|+||||+++|
T Consensus 301 ~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n 380 (453)
T cd07149 301 TDVGPMISEAEAERIEEWVEEAVEGGARLLTGGKRDGAILEPTVLTDVPPDMKVVCEEVFAPVVSLNPFDTLDEAIAMAN 380 (453)
T ss_pred CccccccCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCeEEcCEEEeCCCCCCHHHhCCCCCceEEEEEeCCHHHHHHHHh
Confidence 11 1222211233 5 2 3578999999999999999999999999999
Q ss_pred hcCCCceeEEEecCHHHHHHHHhcCCeeeEEEcCCCCC-CCCCccCCccccccccCcccccccchhhcccEEEEEE
Q 005041 619 QHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRF-CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 693 (717)
Q Consensus 619 ~~~~GL~a~I~t~d~~~a~~~~~~l~~G~v~iN~~~~~-~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v~ 693 (717)
+++|||++||||+|.+++.++++++++|.|+||+++.. .+..||||.+.||+| +++|++|+++||+.|+|.
T Consensus 381 ~~~~gLt~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfGG~~~SG~G----~~~g~~~~~~~~~~k~~~ 452 (453)
T cd07149 381 DSPYGLQAGVFTNDLQKALKAARELEVGGVMINDSSTFRVDHMPYGGVKESGTG----REGPRYAIEEMTEIKLVC 452 (453)
T ss_pred CCCcCceEEEEcCCHHHHHHHHHHcCcCeEEECCCCCCCCCCCCcCCccccccC----CCChHHHHHHhhceeEEe
Confidence 99999999999999999999999999999999987654 467899999999986 346999999999999985
No 97
>PRK15398 aldehyde dehydrogenase EutE; Provisional
Probab=100.00 E-value=2.7e-70 Score=610.11 Aligned_cols=377 Identities=18% Similarity=0.212 Sum_probs=308.2
Q ss_pred HhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhhchhHHHHHHhhcChhHHHHHHH
Q 005041 292 QVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAK 371 (717)
Q Consensus 292 ~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~g~~~a~~~~~~~~~~~i~~~~~ 371 (717)
.+|+++++++|++||++|++++.++|.++|++++++|++|+++|++++++|++++. .++.. ..+.+.++
T Consensus 35 ~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~la~~l~~~~~ela~~~~~E~Gk~~----~ea~~-------~~~~~~~~ 103 (465)
T PRK15398 35 FASVDDAVAAAKVAQQRYQQKSLAMRQRIIDAIREALLPHAEELAELAVEETGMGR----VEDKI-------AKNVAAAE 103 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCc----HHHHH-------HHHHHHHH
Confidence 68999999999999999999999999999999999999999999999887775542 12211 12222222
Q ss_pred HHHHHhcccccccccccccccCCCceEEEeecceeEEEEEcCC-Cch-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHH
Q 005041 372 SIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILH 449 (717)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~ 449 (717)
.++ +......... . ..+...+++++|+|||++|+|| ||. +.++++++||++||+||+|||+.||+|+..++
T Consensus 104 ~~~---~~~~~~~~~~---~-~~~~~~~v~~~P~GVV~~I~PwN~P~~~~~~~ia~ALaaGN~VVlKps~~tp~t~~~l~ 176 (465)
T PRK15398 104 KTP---GVEDLTTEAL---T-GDNGLTLIEYAPFGVIGAVTPSTNPTETIINNAISMLAAGNSVVFSPHPGAKKVSLRAI 176 (465)
T ss_pred Hhc---cccccccCcc---c-CCCceeEEEecccEEEEEeeCCCCchHHHHHHHHHHHHhCCcEEEECCccchHHHHHHH
Confidence 111 0000001111 0 1123457788999999999998 795 56799999999999999999999999999999
Q ss_pred HHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHhhcCCCEEEecCCcceEEEcCCCCHHH
Q 005041 450 KVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDV 527 (717)
Q Consensus 450 ~~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a~~p~~lElGGk~p~iV~~dADl~~ 527 (717)
+++++++.++ +|+|++|+|++ +.+.++.|.+||+||+|+||||+++|+.|++ +.+|+++|||||||+||++|||||+
T Consensus 177 ~ll~~~l~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGS~~~G~~v~~-~~k~~~~elGGk~p~IV~~dADld~ 255 (465)
T PRK15398 177 ELLNEAIVAAGGPENLVVTVAEPTIETAQRLMKHPGIALLVVTGGPAVVKAAMK-SGKKAIGAGAGNPPVVVDETADIEK 255 (465)
T ss_pred HHHHHHHHHcCCCCCeEEEecCCCHHHHHHHHcCCCccEEEeeCCHHHHHHHHH-cCCceeeecCCCceEEEecCCCHHH
Confidence 9999888889 99999999995 5567777888999999999999999999988 5799999999999999999999999
Q ss_pred HHHHHHhhccCCCc-cccccceEEEcCcccChhhHHHHHHH------------HHHc----C--c-e-EecCcc-----c
Q 005041 528 AKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVE------------LQHE----G--V-G-LFGGPR-----A 581 (717)
Q Consensus 528 A~~~i~~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~------------~~~~----~--~-~-~~g~~~-----~ 581 (717)
|++.+++|+|.|+| +|+|++|+|||++|| |+|+++|+++ +.++ + . + +.|+.. .
T Consensus 256 Aa~~i~~g~~~n~GQ~C~A~~rvlV~~si~-d~f~~~l~~~~~~li~~~~~~~v~~~l~~~~~~~~~~~~g~~~~~i~~~ 334 (465)
T PRK15398 256 AARDIVKGASFDNNLPCIAEKEVIVVDSVA-DELMRLMEKNGAVLLTAEQAEKLQKVVLKNGGTVNKKWVGKDAAKILEA 334 (465)
T ss_pred HHHHHHHhcccCCCCcCCCCceEEEeHHHH-HHHHHHHHHcCCccCCHHHHHHHHHHHhhcccccchhhhCCCHHHHHHh
Confidence 99999999999987 999999999999999 8999999882 2211 1 0 1 112211 0
Q ss_pred cc-cc----c-C-----CCCccccccccCceEEEEEeCCHHHHHHHHHhcCCCc--eeEEEecCHHHHHHHHhcCCeeeE
Q 005041 582 SK-LL----Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAH--TDCIVAEDQKVAETFLCQVDSAAV 648 (717)
Q Consensus 582 ~~-~~----p-i-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL--~a~I~t~d~~~a~~~~~~l~~G~v 648 (717)
.+ ++ | | ++|++++||+||||++|++|+|+||||+++|+++||| ++||||+|.+++++|++++++|+|
T Consensus 335 ~G~~~~~~~~tvl~~v~~d~~i~~eE~FGPVl~V~~~~d~deAi~~aN~~~yGL~hs~~IfT~d~~~a~~~a~~l~~G~V 414 (465)
T PRK15398 335 AGINVPKDTRLLIVETDANHPFVVTELMMPVLPVVRVKDVDEAIALAVKLEHGNRHTAIMHSRNVDNLNKMARAIQTSIF 414 (465)
T ss_pred CCCCCCCCCCEEEecCCCCCchhcccccCceEEEEEeCCHHHHHHHHHhcccCCcceEEEecCCHHHHHHHHHhCCceEE
Confidence 12 22 3 2 3589999999999999999999999999999999998 999999999999999999999999
Q ss_pred EEcCCCCCCCCCccCCccccccccCcccccccchhhcccEEEEEEecC
Q 005041 649 FHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGN 696 (717)
Q Consensus 649 ~iN~~~~~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v~~~~ 696 (717)
+||.++. +.+||||.+.|. +|.+|+.| ...|.+|++.++.
T Consensus 415 ~iN~~~~--~~~p~gg~~~s~-----~~~~~~~g-~~~~~~~~~~~~~ 454 (465)
T PRK15398 415 VKNGPSY--AGLGLGGEGFTT-----FTIATPTG-EGVTSARTFTRRR 454 (465)
T ss_pred EECCCCc--cccCcCCCCCce-----eeecccCC-CCccchhhhhhhe
Confidence 9998753 567888766543 45568999 9999999988754
No 98
>cd07126 ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12), family 12: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. P5CDH is a mitochondrial enzyme involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. The P5CDH, ALDH12A1 gene, in Arabidopsis, has been identified as an osmotic-stress-inducible ALDH gene. This CD contains both Viridiplantae and Alveolata P5CDH sequences.
Probab=100.00 E-value=6.6e-70 Score=608.46 Aligned_cols=380 Identities=16% Similarity=0.169 Sum_probs=320.5
Q ss_pred HHHHhcCCcceEEEecCCcccccHhhHHHHHHHHHHHHHHH--hcCCHHHH----HHHHHHHHHHHHHC--HHHHHHHHH
Q 005041 269 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRL--QALQSQDR----RKILLDVADALEAN--ESLIKVENE 340 (717)
Q Consensus 269 l~~~~tg~~iGT~i~a~~~~~~~~~~v~~av~~A~~A~~~w--~~~~~~~R----~~~L~~~a~~l~~~--~~el~~~~~ 340 (717)
..+|.+++.++++..++ .+|+++|+++|++||+.| +.++..+| .++|++++++|++| .++|+++++
T Consensus 16 ~~nP~t~~~i~~~~~a~------~~dv~~Av~aA~~A~~~W~~~~~~~~~R~l~~~~il~~~a~~l~~~~~~~~la~~~~ 89 (489)
T cd07126 16 LLDPLNGDKFISVPDTD------EDEINEFVDSLRQCPKSGLHNPLKNPERYLLYGDVSHRVAHELRKPEVEDFFARLIQ 89 (489)
T ss_pred eeCCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHhccccCCCHHHHhhhHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 36688999999998888 899999999999999998 56779999 89999999999999 499999988
Q ss_pred HHHHHHHhhchhHHHHHHhhcChhHHHHHHHHHHHHhccccc-ccccccccccCCCceEEEeecceeEEEEEcCC-Cch-
Q 005041 341 ADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD- 417 (717)
Q Consensus 341 ~d~~~~~~~g~~~a~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~- 417 (717)
+|+||+. .++ ..|+..+++.+++|++..+. .+..........+...+++|+|+|||++|+|| ||.
T Consensus 90 ~e~GK~~----~~a--------~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~v~r~P~GVV~~I~PwNfP~~ 157 (489)
T cd07126 90 RVAPKSD----AQA--------LGEVVVTRKFLENFAGDQVRFLARSFNVPGDHQGQQSSGYRWPYGPVAIITPFNFPLE 157 (489)
T ss_pred HHcCCCH----HHH--------HHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCCceeEEEEecceEEEEECCCchHHH
Confidence 7776542 122 35788999999999865432 23321100111234568899999999999998 685
Q ss_pred hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHH
Q 005041 418 ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKL 495 (717)
Q Consensus 418 ~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~ 495 (717)
+.+++++|||++||+||+||||.||+|+.+|++++.+ + ||+|++|+|+| +++.++ +..|+++|+|+||||+++
T Consensus 158 l~~~~ia~ALaaGN~VVlKPSe~tp~~~~~l~~~~~~----aGlP~gv~~vv~G~~~~~~~-l~~~~~v~~V~FTGS~~v 232 (489)
T cd07126 158 IPALQLMGALFMGNKPLLKVDSKVSVVMEQFLRLLHL----CGMPATDVDLIHSDGPTMNK-ILLEANPRMTLFTGSSKV 232 (489)
T ss_pred HHHHHHHHHHHcCCEEEEECCCCCCHHHHHHHHHHHH----hCcCcCcEEEEeCCchhHHH-HhcCCCCCEEEEECCHHH
Confidence 6789999999999999999999999999999999987 7 99999999996 455555 556889999999999999
Q ss_pred HHHHHhhcCCCEEEecCCcceEEEcCCC-CHHHHHHHHHhhccCCCc-cccccceEEEcCc-ccChhhHHHHHHHHHHcC
Q 005041 496 VSQIKESTKIPVLGHADGICHVYVDKSA-NLDVAKNIVIDAKIDYPA-ACNAMETLLVHKD-LACNGALNELVVELQHEG 572 (717)
Q Consensus 496 g~~i~~~a~~p~~lElGGk~p~iV~~dA-Dl~~A~~~i~~~~~~n~g-~C~a~~rv~V~~~-i~d~~f~~~l~~~~~~~~ 572 (717)
||.|+..+++++.+|+|||||+||++|| |+|.|++.+++++|.|+| +|+|++|+|||++ ++ |+|+++|++.++++.
T Consensus 233 Gr~i~~~~g~k~~lElgg~~~~IV~~Da~dld~a~~~~~~g~f~naGQ~C~a~~rv~V~~~i~~-d~f~~~l~~~~~~~~ 311 (489)
T cd07126 233 AERLALELHGKVKLEDAGFDWKILGPDVSDVDYVAWQCDQDAYACSGQKCSAQSILFAHENWVQ-AGILDKLKALAEQRK 311 (489)
T ss_pred HHHHHHHhCCCEEeecCCCCceEECCCcccHHHHHHHHHHHHHhcCCCcCCCCceEEEeCcchH-HHHHHHHHHHHHhcc
Confidence 9999988888999999999999999999 999999999999999987 9999999999999 57 699999999877542
Q ss_pred -----------------------------ceE-ecCccc------c--ccc-c--C--C--------CCccccccccCce
Q 005041 573 -----------------------------VGL-FGGPRA------S--KLL-Q--I--P--------ETRLFHHEYNSMV 601 (717)
Q Consensus 573 -----------------------------~~~-~g~~~~------~--~~~-p--i--~--------~~~~~~eE~FGPV 601 (717)
+++ +|+... . +|+ | + + +|++++||+||||
T Consensus 312 ~g~~~~Gpli~~~~~~v~~~i~~a~~~~Ga~~l~GG~~~~~~~~~~~~~~~~PTvl~~~~~~~~~~~~~~i~~eEiFGPV 391 (489)
T cd07126 312 LEDLTIGPVLTWTTERILDHVDKLLAIPGAKVLFGGKPLTNHSIPSIYGAYEPTAVFVPLEEIAIEENFELVTTEVFGPF 391 (489)
T ss_pred cCCCcCCCCcCHHHHHHHHHHHHHHhCCCCEEEeCCcccccccccCCcceecCeEEEeccccccCCCCCHHHhCCCcCCE
Confidence 122 244321 1 244 5 2 1 4789999999999
Q ss_pred EEEEEeCC--HHHHHHHHHhcCCCceeEEEecCHHHHHHHHhcCCeee--EEEcCCCCCCCC----CccCCcccccccc
Q 005041 602 CTVEIVDD--VRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAA--VFHNASTRFCDG----ARFGLGAEVGIST 672 (717)
Q Consensus 602 l~v~~~~~--~deAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~--v~iN~~~~~~~~----~pfG~g~~~G~~~ 672 (717)
++|++|+| +||||+++|+++|||++||||+|.++++++++++++|+ |+||+.+...+. .||||.|.||+|+
T Consensus 392 l~V~~~~~~~~deai~~aN~~~~gL~~~vft~d~~~~~~~~~~~~~G~~~v~~n~~~~~~~~~~~~~pfgg~k~sg~g~ 470 (489)
T cd07126 392 QVVTEYKDEQLPLVLEALERMHAHLTAAVVSNDIRFLQEVLANTVNGTTYAGIRARTTGAPQNHWFGPAGDPRGAGIGT 470 (489)
T ss_pred EEEEEECCCCHHHHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCcceEEEEecCCCCCCCcccCcCCCCCCcccCCCC
Confidence 99999999 99999999999999999999999999999999999999 669987665444 8999999999864
No 99
>cd07095 ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like. N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate.
Probab=100.00 E-value=4.4e-70 Score=606.81 Aligned_cols=374 Identities=17% Similarity=0.153 Sum_probs=312.2
Q ss_pred hHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhhchhHHHHHHhhcChhHHHHHHHHH
Q 005041 294 GAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSI 373 (717)
Q Consensus 294 ~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~g~~~a~~~~~~~~~~~i~~~~~~~ 373 (717)
|+++++++|++||+.|+++|.++|.++|++++++|++|.++|++++++|+|++.. ++ ..|+..+++.+
T Consensus 1 ~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~----ea--------~~ev~~~~~~~ 68 (431)
T cd07095 1 QVDAAVAAARAAFPGWAALSLEERAAILRRFAELLKANKEELARLISRETGKPLW----EA--------QTEVAAMAGKI 68 (431)
T ss_pred CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHH----HH--------HHHHHHHHHHH
Confidence 5789999999999999999999999999999999999999999999888766532 22 12455555555
Q ss_pred HHHhcccc-cccccccccccCCCceEEEeecceeEEEEEcCC-Cch-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHH
Q 005041 374 RILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHK 450 (717)
Q Consensus 374 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~ 450 (717)
++++.... ..+..... ..+...+++++|+|||++|+|| ||. ++++++++||++||+||+|||+.+|+|+..+++
T Consensus 69 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VI~Kps~~~~~~~~~l~~ 145 (431)
T cd07095 69 DISIKAYHERTGERATP---MAQGRAVLRHRPHGVMAVFGPFNFPGHLPNGHIVPALLAGNTVVFKPSELTPAVAELMVE 145 (431)
T ss_pred HHHHHHHHHhcCCcccC---CCCceEEEEEecceEEEEECCCchHHHHHHHHHHHHHhcCCEEEeeCCCCCcHHHHHHHH
Confidence 54443221 11211111 1234567889999999999998 686 567999999999999999999999999999999
Q ss_pred HHHHhcccc-cCcCceEEecCCChhhhhhcCCCCccEEEeecCHHHHHHHHhhc----CCCEEEecCCcceEEEcCCCCH
Q 005041 451 VITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST----KIPVLGHADGICHVYVDKSANL 525 (717)
Q Consensus 451 ~~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a----~~p~~lElGGk~p~iV~~dADl 525 (717)
++.+ + +|+|++|+|+|..+.++.|..||++|+|+||||+++|+.|++.+ .+|++||||||||+||++|||+
T Consensus 146 ~~~~----ag~P~g~~~~v~g~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~lElgG~~~~iV~~daDl 221 (431)
T cd07095 146 LWEE----AGLPPGVLNLVQGGRETGEALAAHEGIDGLLFTGSAATGLLLHRQFAGRPGKILALEMGGNNPLVVWDVADI 221 (431)
T ss_pred HHHH----hCcChhHheEEeCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHhhccCCCcEEEECCCCCeEEECCCCCH
Confidence 9987 7 99999999997556788888999999999999999999998864 3789999999999999999999
Q ss_pred HHHHHHHHhhccCCCc-cccccceEEEcCc-ccChhhHHHHHHHHHHcCce-----------------------------
Q 005041 526 DVAKNIVIDAKIDYPA-ACNAMETLLVHKD-LACNGALNELVVELQHEGVG----------------------------- 574 (717)
Q Consensus 526 ~~A~~~i~~~~~~n~g-~C~a~~rv~V~~~-i~d~~f~~~l~~~~~~~~~~----------------------------- 574 (717)
|.|++.+++++|.|+| .|++++|+|||++ +| |+|+++|+++++++.+.
T Consensus 222 ~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~~i~-d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~i~~~v~~a~ 300 (431)
T cd07095 222 DAAAYLIVQSAFLTAGQRCTCARRLIVPDGAVG-DAFLERLVEAAKRLRIGAPDAEPPFMGPLIIAAAAARYLLAQQDLL 300 (431)
T ss_pred HHHHHHHHHHHHHhCCCCCCCCeEEEEcCcchH-HHHHHHHHHHHHhCCCCCCCCCCCCcccccCHHHHHHHHHHHHHHH
Confidence 9999999999999987 9999999999999 99 89999999999876421
Q ss_pred -----E-ecCccc--cc-cc-c-C----CCCccccccccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEecCHHHHHHH
Q 005041 575 -----L-FGGPRA--SK-LL-Q-I----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETF 639 (717)
Q Consensus 575 -----~-~g~~~~--~~-~~-p-i----~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~I~t~d~~~a~~~ 639 (717)
+ .|+... .+ |+ | | ++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++
T Consensus 301 ~~ga~~l~gg~~~~~~g~~~~Ptv~~v~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~a~~~ 380 (431)
T cd07095 301 ALGGEPLLAMERLVAGTAFLSPGIIDVTDAADVPDEEIFGPLLQVYRYDDFDEAIALANATRFGLSAGLLSDDEALFERF 380 (431)
T ss_pred hcCCEEEeCCCcCCCCCeEEcCEEEecCCCChHHhCCCcCCeEEEEeeCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHH
Confidence 1 122111 12 33 5 2 3589999999999999999999999999999999999999999999999999
Q ss_pred HhcCCeeeEEEcCCCCC-CCCCccCCccccccccCcccccccchhhcccEEEEE
Q 005041 640 LCQVDSAAVFHNASTRF-CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWI 692 (717)
Q Consensus 640 ~~~l~~G~v~iN~~~~~-~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v 692 (717)
++++++|.|+||+++.. .+..||||.|.||+| +++|.+|++ |++.|++
T Consensus 381 ~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G----~~~g~~~~~-~~~~~~~ 429 (431)
T cd07095 381 LARIRAGIVNWNRPTTGASSTAPFGGVGLSGNH----RPSAYYAAD-YCAYPVA 429 (431)
T ss_pred HHhCCcceEEECCCCCCCCCCCCCCCcccccCC----CCChHHHHH-HHhhhhc
Confidence 99999999999987653 345899999999986 356899999 5555544
No 100
>cd07093 ALDH_F8_HMSADH Human aldehyde dehydrogenase family 8 member A1-like. In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone.
Probab=100.00 E-value=9.1e-70 Score=610.91 Aligned_cols=395 Identities=19% Similarity=0.189 Sum_probs=336.1
Q ss_pred HHhcCCcceEEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhhc
Q 005041 271 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAG 350 (717)
Q Consensus 271 ~~~tg~~iGT~i~a~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~g 350 (717)
+|.+++.++++..++ .+++++++++|++||+.|+++|.++|.++|++++++|++|+++|++++.+|++++..
T Consensus 3 ~P~t~~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~-- 74 (455)
T cd07093 3 NPATGEVLAKVPEGG------AAEVDAAVAAAKEAFPGWSRMSPAERARILHKVADLIEARADELALLESLDTGKPIT-- 74 (455)
T ss_pred CCCCCCEEEEEcCCC------HHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHH--
Confidence 578899999988888 899999999999999999999999999999999999999999999998887765431
Q ss_pred hhHHHHHHhhcChhHHHHHHHHHHHHhcccccc-cccccccccCCCceEEEeecceeEEEEEcCC-Cch-hHHHHHHHHH
Q 005041 351 YAKSLVSRLALKPGKISSLAKSIRILADMEEPI-GQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAI 427 (717)
Q Consensus 351 ~~~a~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~AL 427 (717)
++. ..++...++.+++++...... +...+ .+.+...+++++|+|||++|+|| ||. +.++++++||
T Consensus 75 --~~~-------~~ev~~~i~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~AL 142 (455)
T cd07093 75 --LAR-------TRDIPRAAANFRFFADYILQLDGESYP---QDGGALNYVLRQPVGVAGLITPWNLPLMLLTWKIAPAL 142 (455)
T ss_pred --HHH-------HHHHHHHHHHHHHHHHhHHHhCCcccc---CCCCceEEEEEEeeeEEEEECCCChHHHHHHHHHHHHH
Confidence 111 125556666666655432211 11111 11244567889999999999998 685 5679999999
Q ss_pred HhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHhhc--
Q 005041 428 RSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST-- 503 (717)
Q Consensus 428 aaGN~vVlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a-- 503 (717)
++||+||+|||+.+|+++..+.+++++ + +|+|+||+|++ +.++++.|..|++||+|+||||+.+|+.|++.+
T Consensus 143 ~aGN~VIlkps~~~p~~~~~l~~~l~~----aglP~g~v~~v~g~~~~~~~~L~~~~~i~~V~ftGs~~~g~~v~~~aa~ 218 (455)
T cd07093 143 AFGNTVVLKPSEWTPLTAWLLAELANE----AGLPPGVVNVVHGFGPEAGAALVAHPDVDLISFTGETATGRTIMRAAAP 218 (455)
T ss_pred hcCCEEEeECCCcCcHHHHHHHHHHHh----cCCCccceEEEecCchHHHHHHhcCCCccEEEEECCHHHHHHHHHHHhh
Confidence 999999999999999999999999986 7 99999999996 556778888899999999999999999999877
Q ss_pred -CCCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccChhhHHHHHHHHHHcCc--------
Q 005041 504 -KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV-------- 573 (717)
Q Consensus 504 -~~p~~lElGGk~p~iV~~dADl~~A~~~i~~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~-------- 573 (717)
.+|+++|||||||+||++|||++.|++.+++++|.|+| .|++++|||||+++| |+|+++|+++++++.+
T Consensus 219 ~~~~~~lelgG~~~~iV~~dAdl~~a~~~i~~~~~~~~GQ~C~a~~~v~v~~~i~-d~f~~~l~~~~~~~~~g~p~~~~~ 297 (455)
T cd07093 219 NLKPVSLELGGKNPNIVFADADLDRAVDAAVRSSFSNNGEVCLAGSRILVQRSIY-DEFLERFVERAKALKVGDPLDPDT 297 (455)
T ss_pred cccceEeecCCCCceEECCCCCHHHHHHHHHHHHHhccCCCcCCCceEEEcHHHH-HHHHHHHHHHHHhCCCCCCCCCCC
Confidence 39999999999999999999999999999999999976 999999999999999 8999999999876521
Q ss_pred --------------------------eE-ecCccc------cc-cc-c-C-----CCCccccccccCceEEEEEeCCHHH
Q 005041 574 --------------------------GL-FGGPRA------SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRA 612 (717)
Q Consensus 574 --------------------------~~-~g~~~~------~~-~~-p-i-----~~~~~~~eE~FGPVl~v~~~~~~de 612 (717)
++ +|+... .+ ++ | | +++++++||+||||++|++|+|+||
T Consensus 298 ~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~~~~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~e 377 (455)
T cd07093 298 EVGPLISKEHLEKVLGYVELARAEGATILTGGGRPELPDLEGGYFVEPTVITGLDNDSRVAQEEIFGPVVTVIPFDDEEE 377 (455)
T ss_pred CcCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCceECCEEEecCCCCChHHhCCCCCceEEEEeeCCHHH
Confidence 11 233221 12 23 5 2 3588999999999999999999999
Q ss_pred HHHHHHhcCCCceeEEEecCHHHHHHHHhcCCeeeEEEcCCCCCCCCCccCCccccccccCcccccccchhhcccEEEEE
Q 005041 613 AIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWI 692 (717)
Q Consensus 613 Ai~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v 692 (717)
||+++|+++|||++||||+|.++++++++++++|.|+||++.......||||.+.||+| +++|++|+++|++.|++
T Consensus 378 ai~~~n~~~~gls~~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~G----~~~g~~~~~~~~~~k~~ 453 (455)
T cd07093 378 AIELANDTPYGLAAYVWTRDLGRAHRVARRLEAGTVWVNCWLVRDLRTPFGGVKASGIG----REGGDYSLEFYTELKNV 453 (455)
T ss_pred HHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCCccCcCC----CCchHHHHHHHhceeEE
Confidence 99999999999999999999999999999999999999998776677899999999986 24699999999999998
Q ss_pred Ee
Q 005041 693 LR 694 (717)
Q Consensus 693 ~~ 694 (717)
.+
T Consensus 454 ~~ 455 (455)
T cd07093 454 CI 455 (455)
T ss_pred eC
Confidence 53
No 101
>TIGR01238 D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain). This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase.
Probab=100.00 E-value=6.7e-70 Score=613.43 Aligned_cols=407 Identities=17% Similarity=0.190 Sum_probs=340.2
Q ss_pred HHHHHHHHHcCC---cEEEEeCCC-----cchHHHHhcC-CcceEEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHH
Q 005041 245 VNAAYCAACAGI---PVVITSGFA-----MDSIIKVLEG-KRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQ 315 (717)
Q Consensus 245 v~aa~~a~~~gi---~v~I~~g~~-----~~~l~~~~tg-~~iGT~i~a~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~ 315 (717)
+++++...+.++ |.+| +|.- .-.+.+|.++ +.++++..++ .+|+++++++|++||+.|+++|..
T Consensus 24 ~~~~~~~~~~~~~~~~~~i-~g~~~~~~~~~~~~nP~t~~e~i~~~~~~~------~~dv~~av~~A~~a~~~W~~~~~~ 96 (500)
T TIGR01238 24 LEAQIHAWADKTWQAAPII-GHSYKADGEAQPVTNPADRRDIVGQVFHAN------LAHVQAAIDSAQQAFPTWNATPAK 96 (500)
T ss_pred HHHHHHHHhcCceecCceE-CCEEecCCCeEEeeCCCCCCeEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHH
Confidence 446666666653 3333 3331 1235789985 7899998888 899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhhchhHHHHHHhhcChhHHHHHHHHHHHHhcccccccccccccccCCC
Q 005041 316 DRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRILADMEEPIGQILKRTELADG 395 (717)
Q Consensus 316 ~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~g~~~a~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (717)
+|.++|++++++|++|+++|++++++|++++. .++ ..|+..+++.++++++..+.. . +
T Consensus 97 ~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~----~~a--------~~ev~~~i~~l~~~a~~~~~~---~-------~ 154 (500)
T TIGR01238 97 ERAAKLDRLADLLELHMPELMALCVREAGKTI----HNA--------IAEVREAVDFCRYYAKQVRDV---L-------G 154 (500)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCH----HHH--------HHHHHHHHHHHHHHHHHHHHh---c-------C
Confidence 99999999999999999999999888776542 122 247888888888887543210 0 1
Q ss_pred ceEEEeecceeEEEEEcCC-Cch-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-C
Q 005041 396 LILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-R 471 (717)
Q Consensus 396 ~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~-~ 471 (717)
...++|+|||++|+|| ||. +.++++++||++||+||+|||++||+++..+++++.+ + +|+|++|+|+| +
T Consensus 155 ---~~~~~P~GVV~~I~pwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~----aGlP~gvv~~v~g~~ 227 (500)
T TIGR01238 155 ---EFSVESRGVFVCISPWNFPLAIFTGQISAALAAGNTVIAKPAEQTSLIAYRAVELMQE----AGFPAGTIQLLPGRG 227 (500)
T ss_pred ---ceeccCcceEEEECCCchHHHHHHHHHHHHHHcCCEEEEeCCCCccHHHHHHHHHHHH----cCCCCCceEEEecCc
Confidence 1358999999999998 786 5679999999999999999999999999999999987 7 99999999996 4
Q ss_pred ChhhhhhcCCCCccEEEeecCHHHHHHHHhhcC------CCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-ccc
Q 005041 472 EEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK------IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACN 544 (717)
Q Consensus 472 ~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a~------~p~~lElGGk~p~iV~~dADl~~A~~~i~~~~~~n~g-~C~ 544 (717)
.++++.|..||+||+|+||||+.+|+.|++.+. +|+++|||||||+||++|||+|.|++.+++|+|.|+| +|+
T Consensus 228 ~~~~~~l~~~~~v~~V~ftGs~~~g~~v~~~aa~~~~~~~~v~lElGGknp~IV~~dAdld~Aa~~i~~~~f~nsGQ~C~ 307 (500)
T TIGR01238 228 ADVGAALTSDPRIAGVAFTGSTEVAQLINQTLAQREDAPVPLIAETGGQNAMIVDSTALPEQVVRDVLRSAFDSAGQRCS 307 (500)
T ss_pred chHHHHHhcCCCcCeEEEECCHHHHHHHHHHHhhcccCCceEEEecCCcCcEEECCCCCHHHHHHHHHHHHHhcCCCCCC
Confidence 567888889999999999999999999988662 6999999999999999999999999999999999987 999
Q ss_pred ccceEEEcCcccChhhHHHHHHHHHHcCce----------------------------------Ee----cCcc--ccc-
Q 005041 545 AMETLLVHKDLACNGALNELVVELQHEGVG----------------------------------LF----GGPR--ASK- 583 (717)
Q Consensus 545 a~~rv~V~~~i~d~~f~~~l~~~~~~~~~~----------------------------------~~----g~~~--~~~- 583 (717)
|++|||||+++| |+|+++|+++++++++. +. ++.+ ..+
T Consensus 308 a~~rv~V~~~i~-d~f~~~L~~~~~~~~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~l~~~~~~~~~~~~~g~ 386 (500)
T TIGR01238 308 ALRVLCVQEDVA-DRVLTMIQGAMQELKVGVPHLLTTDVGPVIDAEAKQNLLAHIEHMSQTQKKIAQLTLDDSRACQHGT 386 (500)
T ss_pred CCceeEEcHhhH-HHHHHHHHHHHHhCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeeccCCCCCCCCCe
Confidence 999999999999 79999999998875321 11 1100 112
Q ss_pred cc-c-C---CCCccccccccCceEEEEEeC--CHHHHHHHHHhcCCCceeEEEecCHHHHHHHHhcCCeeeEEEcCCCCC
Q 005041 584 LL-Q-I---PETRLFHHEYNSMVCTVEIVD--DVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRF 656 (717)
Q Consensus 584 ~~-p-i---~~~~~~~eE~FGPVl~v~~~~--~~deAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~v~iN~~~~~ 656 (717)
|+ | | ++|.+++||+||||++|++|+ ++||||+++|+++|||++||||+|.+++.++++++++|.|+||+....
T Consensus 387 f~~PTvl~~~~~~~~~eE~FgPvl~v~~~~~~~~deai~~~N~~~~gLs~~vfT~d~~~~~~~~~~l~~G~v~IN~~~~~ 466 (500)
T TIGR01238 387 FVAPTLFELDDIAELSEEVFGPVLHVVRYKARELDQIVDQINQTGYGLTMGVHSRIETTYRWIEKHARVGNCYVNRNQVG 466 (500)
T ss_pred eEcCEEEccCCchHhhCCCcCCEEEEEEeCCCCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhCCcceEEECCCCCC
Confidence 23 5 3 467899999999999999998 799999999999999999999999999999999999999999987643
Q ss_pred C--CCCccCCccccccccCcccccccchhhcccEEEE
Q 005041 657 C--DGARFGLGAEVGISTSRIHARGPVGVEGLLTTRW 691 (717)
Q Consensus 657 ~--~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~ 691 (717)
. +.+||||.+.||+|. +++|.+++++||+.|+
T Consensus 467 ~~~~~~PfGG~k~SG~G~---~~gg~~~~~~~~~~k~ 500 (500)
T TIGR01238 467 AVVGVQPFGGQGLSGTGP---KAGGPHYLYRLTQVQY 500 (500)
T ss_pred CCCCCCCCCccccccCCC---ccCCHHHHHHHHhhcC
Confidence 2 446999999999862 2468999999999874
No 102
>cd07082 ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11. NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants.
Probab=100.00 E-value=1.5e-69 Score=611.35 Aligned_cols=399 Identities=20% Similarity=0.232 Sum_probs=336.2
Q ss_pred HHHHhcCCcceEEEecCCcccccHhhHHHHHHHHHHHHHHHhcC-CHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
Q 005041 269 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQAL-QSQDRRKILLDVADALEANESLIKVENEADVAAAQ 347 (717)
Q Consensus 269 l~~~~tg~~iGT~i~a~~~~~~~~~~v~~av~~A~~A~~~w~~~-~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~ 347 (717)
+.+|.+|+.++++..++ .+|+++++++|++||+.|+++ +.++|.++|++++++|++|+++|++++++|++++.
T Consensus 20 ~~~P~tg~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~ 93 (473)
T cd07082 20 VYSPIDGEVIGSVPALS------ALEILEAAETAYDAGRGWWPTMPLEERIDCLHKFADLLKENKEEVANLLMWEIGKTL 93 (473)
T ss_pred eECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcH
Confidence 36788999999998888 889999999999999999999 99999999999999999999999999998887664
Q ss_pred hhchhHHHHHHhhcChhHHHHHHHHHHHHhccccc-cccccccccc--CCCceEEEeecceeEEEEEcCC-Cch-hHHHH
Q 005041 348 EAGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTEL--ADGLILEKTSCPLGVLLIVFES-RPD-ALVQI 422 (717)
Q Consensus 348 ~~g~~~a~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~ 422 (717)
. ++. .|+...++.++++++..+. .+...+.... ..+...+.+|+|+|||++|+|| +|. +.+++
T Consensus 94 ~----~a~--------~ev~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~ 161 (473)
T cd07082 94 K----DAL--------KEVDRTIDYIRDTIEELKRLDGDSLPGDWFPGTKGKIAQVRREPLGVVLAIGPFNYPLNLTVSK 161 (473)
T ss_pred H----HHH--------HHHHHHHHHHHHHHHHHHHhcCCcccccccccCCCceeEEEEecceEEEEECCcCcHHHHHHHH
Confidence 3 111 2444455555554432221 1221111000 1234567889999999999998 685 56799
Q ss_pred HHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHH
Q 005041 423 ASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIK 500 (717)
Q Consensus 423 ~~~ALaaGN~vVlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~ 500 (717)
+++||++||+||+|||+.+|.++.++++++.+ + +|+|++|++++ +.++++.|..||++|+|+||||+++|+.|+
T Consensus 162 i~~AL~aGN~vilKps~~~~~~~~~l~~~l~~----aglp~~~~~vv~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~ 237 (473)
T cd07082 162 LIPALIMGNTVVFKPATQGVLLGIPLAEAFHD----AGFPKGVVNVVTGRGREIGDPLVTHGRIDVISFTGSTEVGNRLK 237 (473)
T ss_pred HHHHHHcCCEEEEECCCCCcHHHHHHHHHHHH----cCCCccceEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHH
Confidence 99999999999999999999999999999987 7 99999999996 555788888899999999999999999999
Q ss_pred hhc-CCCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccChhhHHHHHHHHHHcCce----
Q 005041 501 EST-KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGVG---- 574 (717)
Q Consensus 501 ~~a-~~p~~lElGGk~p~iV~~dADl~~A~~~i~~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~~---- 574 (717)
+.+ .+|+++|||||||+||++|||++.|++.+++++|.|+| .|+|++|||||+++| |+|+++|+++++++.+.
T Consensus 238 ~~a~~~~~~lelgg~n~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~-d~f~~~l~~~~~~~~~g~~~~ 316 (473)
T cd07082 238 KQHPMKRLVLELGGKDPAIVLPDADLELAAKEIVKGALSYSGQRCTAIKRVLVHESVA-DELVELLKEEVAKLKVGMPWD 316 (473)
T ss_pred HHhCCCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHHhCCCcCCCCeEEEEcHHHH-HHHHHHHHHHHhcCCCCCCCC
Confidence 887 59999999999999999999999999999999999987 999999999999999 79999999999876321
Q ss_pred ------------------------------E-ecCcccccc-c-c-C-----CCCccccccccCceEEEEEeCCHHHHHH
Q 005041 575 ------------------------------L-FGGPRASKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAID 615 (717)
Q Consensus 575 ------------------------------~-~g~~~~~~~-~-p-i-----~~~~~~~eE~FGPVl~v~~~~~~deAi~ 615 (717)
+ .|+....++ + | | +++++++||+||||++|++|+|+||||+
T Consensus 317 ~~~~~gp~i~~~~~~~~~~~~~~a~~~ga~~~~gg~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~ 396 (473)
T cd07082 317 NGVDITPLIDPKSADFVEGLIDDAVAKGATVLNGGGREGGNLIYPTLLDPVTPDMRLAWEEPFGPVLPIIRVNDIEEAIE 396 (473)
T ss_pred CCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCeEEeeEEEecCCCCCHHHhCcCcCceEEEEEeCCHHHHHH
Confidence 1 122221122 2 5 2 3578999999999999999999999999
Q ss_pred HHHhcCCCceeEEEecCHHHHHHHHhcCCeeeEEEcCCCCC-CCCCccCCccccccccCcccccccchhhcccEEEEEEe
Q 005041 616 HIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRF-CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILR 694 (717)
Q Consensus 616 ~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~v~iN~~~~~-~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v~~ 694 (717)
++|+++|||++||||+|.+++.++++++++|+|+||+++.. .+..||||.+.||+| +++|++|+++||+.|++.+
T Consensus 397 ~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~pfGG~k~SG~g----~~~g~~~l~~~~~~k~i~~ 472 (473)
T cd07082 397 LANKSNYGLQASIFTKDINKARKLADALEVGTVNINSKCQRGPDHFPFLGRKDSGIG----TQGIGDALRSMTRRKGIVI 472 (473)
T ss_pred HHhCCCCCceEEEEeCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCcccccccC----CCChHHHHHHhhceeEEEE
Confidence 99999999999999999999999999999999999997644 356899999999996 3468999999999999876
No 103
>cd07103 ALDH_F5_SSADH_GabD Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like. Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species.
Probab=100.00 E-value=1.7e-69 Score=608.37 Aligned_cols=395 Identities=18% Similarity=0.200 Sum_probs=337.7
Q ss_pred HHHhcCCcceEEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhh
Q 005041 270 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 349 (717)
Q Consensus 270 ~~~~tg~~iGT~i~a~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~ 349 (717)
.+|.+|+.++++...+ .+++++++++|++||+.|+++|.++|.++|+++++.|+++.++|++++..|++++..
T Consensus 2 ~~P~tg~~i~~~~~~~------~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~- 74 (451)
T cd07103 2 INPATGEVIGEVPDAG------AADADAAIDAAAAAFKTWRKTTARERAAILRRWADLIRERAEDLARLLTLEQGKPLA- 74 (451)
T ss_pred cCCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHH-
Confidence 3578999999998888 899999999999999999999999999999999999999999999998887765532
Q ss_pred chhHHHHHHhhcChhHHHHHHHHHHHHhcccc-cccccccccccCCCceEEEeecceeEEEEEcCC-Cch-hHHHHHHHH
Q 005041 350 GYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 426 (717)
Q Consensus 350 g~~~a~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~A 426 (717)
++ ..|+...++.+++++...+ ..+...+.. ..+...+.+++|+|||++|+|| ||. ..++++++|
T Consensus 75 ---~a--------~~ev~~~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~A 141 (451)
T cd07103 75 ---EA--------RGEVDYAASFLEWFAEEARRIYGRTIPSP--APGKRILVIKQPVGVVAAITPWNFPAAMITRKIAPA 141 (451)
T ss_pred ---HH--------HHHHHHHHHHHHHHHHHHHHhcCcccccC--CCCcceEEEEeeceEEEEECCCchHHHHHHHHHHHH
Confidence 22 2356667777776654432 223222211 1234567889999999999998 786 457899999
Q ss_pred HHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHhhc-
Q 005041 427 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST- 503 (717)
Q Consensus 427 LaaGN~vVlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a- 503 (717)
|++||+||+|||+.+|+++..+++++++ + +|+|++|+|++ ..+.++.|..|++||+|+||||+.+|+.|++.+
T Consensus 142 L~aGN~VIlKps~~~~~~~~~l~~~l~~----aglP~g~v~~v~~~~~~~~~~l~~~~~vd~V~ftGs~~~g~~v~~~aa 217 (451)
T cd07103 142 LAAGCTVVLKPAEETPLSALALAELAEE----AGLPAGVLNVVTGSPAEIGEALCASPRVRKISFTGSTAVGKLLMAQAA 217 (451)
T ss_pred HHcCCEEEEECCccCcHHHHHHHHHHHH----cCCCcccEEEEecCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHH
Confidence 9999999999999999999999999987 7 99999999996 456778788899999999999999999998876
Q ss_pred --CCCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccChhhHHHHHHHHHHcCc-------
Q 005041 504 --KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------- 573 (717)
Q Consensus 504 --~~p~~lElGGk~p~iV~~dADl~~A~~~i~~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~------- 573 (717)
.+|+++|+|||||+||++|||++.|++.+++|+|.|+| .|++++|||||+++| |+|+++|+++++++.+
T Consensus 218 ~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~-~~f~~~l~~~~~~~~~g~~~~~~ 296 (451)
T cd07103 218 DTVKRVSLELGGNAPFIVFDDADLDKAVDGAIASKFRNAGQTCVCANRIYVHESIY-DEFVEKLVERVKKLKVGNGLDEG 296 (451)
T ss_pred hcCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHHhcCCCCCCCeeEEEcHHHH-HHHHHHHHHHHHhccCCCCCCCC
Confidence 48999999999999999999999999999999999987 999999999999999 8999999999887531
Q ss_pred ---------------------------eE-ecCccc--cc-cc-c-C-----CCCccccccccCceEEEEEeCCHHHHHH
Q 005041 574 ---------------------------GL-FGGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAID 615 (717)
Q Consensus 574 ---------------------------~~-~g~~~~--~~-~~-p-i-----~~~~~~~eE~FGPVl~v~~~~~~deAi~ 615 (717)
++ .|+... .+ ++ | | +++++++||+||||++|++|+|+||||+
T Consensus 297 ~~~gp~i~~~~~~~~~~~i~~a~~~ga~~l~gg~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~ 376 (451)
T cd07103 297 TDMGPLINERAVEKVEALVEDAVAKGAKVLTGGKRLGLGGYFYEPTVLTDVTDDMLIMNEETFGPVAPIIPFDTEDEVIA 376 (451)
T ss_pred CCCCcCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCcEECCEEeeCCCCcCHHHhCCCCCceEEEEEECCHHHHHH
Confidence 11 122221 12 33 5 2 3578999999999999999999999999
Q ss_pred HHHhcCCCceeEEEecCHHHHHHHHhcCCeeeEEEcCCCCCCCCCccCCccccccccCcccccccchhhcccEEEEEE
Q 005041 616 HIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 693 (717)
Q Consensus 616 ~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v~ 693 (717)
++|+++|||++||||+|.++++++++++++|.|+||+++...+..||||.+.||+| +++|++|+++||+.|++.
T Consensus 377 ~~n~~~~gl~~~i~t~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~SG~G----~~~g~~~~~~~~~~k~v~ 450 (451)
T cd07103 377 RANDTPYGLAAYVFTRDLARAWRVAEALEAGMVGINTGLISDAEAPFGGVKESGLG----REGGKEGLEEYLETKYVS 450 (451)
T ss_pred HHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCCccCcCC----ccchHHHHHHHhceeEEe
Confidence 99999999999999999999999999999999999998766677899999999886 346999999999999875
No 104
>KOG2456 consensus Aldehyde dehydrogenase [Energy production and conversion]
Probab=100.00 E-value=4e-70 Score=559.86 Aligned_cols=383 Identities=20% Similarity=0.228 Sum_probs=331.0
Q ss_pred hHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhhchhHHHHHHhhcChhHHHHHHHHH
Q 005041 294 GAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSI 373 (717)
Q Consensus 294 ~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~g~~~a~~~~~~~~~~~i~~~~~~~ 373 (717)
.+++.++++|.+|.+-++.|.+.|.++|+++...+++|+++|.+++.+|+.+++. ++...++....+++.++++++
T Consensus 3 ~~~~~v~~~R~~F~sGrtr~~efR~~QL~~L~r~i~e~e~~i~~Al~~DL~k~~~----es~~~Ev~~~~~~i~~~l~~L 78 (477)
T KOG2456|consen 3 AISETVRRLRLAFSSGRTRPLEFRKQQLEALYRMIQENEKEIIEALAADLHKPEL----ESYLNEVGYVLNEIRYALENL 78 (477)
T ss_pred cHHHHHHHHHHHHhcCCcCChHHHHHHHHHHHHHHHhhHHHHHHHHHHHhccchh----HHHHHHHHHHHHHHHHHHHhh
Confidence 3456689999999999999999999999999999999999999999999988754 455566777788999999999
Q ss_pred HHHhcccccccccccccccCCCceEEEeecceeEEEEEcCC-Cch-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHH
Q 005041 374 RILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKV 451 (717)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~~ 451 (717)
..|+...+... ... +. -.+.+++.+|+|||++|+|| ||. +++.++++|||||||||+||||.+|.|+.+++++
T Consensus 79 ~~wv~~~~v~~-~~~--t~--~dk~~I~~~p~GvVLiI~~wNyP~~L~l~PligAiAAGN~VVlKPSEls~n~a~~lakl 153 (477)
T KOG2456|consen 79 PEWVKPEPVKK-SFL--TF--LDKAYIEKEPLGVVLIIGPWNYPLNLTLVPLIGAIAAGNAVVLKPSELSPNTAKLLAKL 153 (477)
T ss_pred HHhccccccCc-ccc--cc--cCceeEEecCCceEEEEccCCCcceeehhhhhhhhhcCCEEEechhhcChhHHHHHHHH
Confidence 99986433211 111 11 12467889999999999999 785 6789999999999999999999999999999999
Q ss_pred HHHhcccccCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHhhc---CCCEEEecCCcceEEEcCCCCHHH
Q 005041 452 ITSAIPDTVGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST---KIPVLGHADGICHVYVDKSANLDV 527 (717)
Q Consensus 452 ~~~al~~alP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a---~~p~~lElGGk~p~iV~~dADl~~ 527 (717)
+.+ +|+++++.||.| .+++.++|.+ ++|+|+||||+.+||+||.+| .+||+||||||+|++|++|||++-
T Consensus 154 lp~----Yld~~~~~VV~Ggv~ETt~LL~~--rfD~IfyTGsp~VgkIim~aAaKhLTPvtLELGGKsP~~vd~~~d~~i 227 (477)
T KOG2456|consen 154 LPQ----YLDQDLIRVVNGGVPETTELLKQ--RFDHIFYTGSPRVGKIIMAAAAKHLTPVTLELGGKSPCYVDKNCDLKI 227 (477)
T ss_pred HHH----hcCcceEEEecCCCchHHHHHHh--hccEEEecCCchHHHHHHHHHHhcCCcEEEEcCCCCCeeecCCcCHHH
Confidence 986 699999999995 6788898864 799999999999999999887 389999999999999999999999
Q ss_pred HHHHHHhhccCCCc-cccccceEEEcCcccChhhHHHHHHHHHHc-Cc----------------------------e-Ee
Q 005041 528 AKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHE-GV----------------------------G-LF 576 (717)
Q Consensus 528 A~~~i~~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~-~~----------------------------~-~~ 576 (717)
|+++|+|+++.|+| +|+|+++|+++.+++ +.|+++++..+++. |- + ..
T Consensus 228 a~~RI~~gk~~N~GQtCvapDYiL~~k~~~-~kli~alk~~l~eFYG~n~~eS~d~sRiIn~~hf~Rl~~ll~~~~kv~~ 306 (477)
T KOG2456|consen 228 AARRIAWGKWMNSGQTCVAPDYILCSKSIQ-PKLIDALKSTLKEFYGENPKESKDLSRIINQRHFQRLSALLDETGKVAI 306 (477)
T ss_pred HHHHHHHHhhccCCCeeccCCeEEecHhhh-HHHHHHHHHHHHHHhCCCccccccHHHHhhHHHHHHHHHHhcCCCceec
Confidence 99999999999987 999999999999999 89999999888864 10 0 12
Q ss_pred cCccc--cccc-c-C-----CCCccccccccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEecCHHHHHHHHhcCCeee
Q 005041 577 GGPRA--SKLL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAA 647 (717)
Q Consensus 577 g~~~~--~~~~-p-i-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~ 647 (717)
|++.. ..++ | | .++++|+||+|||||||+.|+|+||+|+.+|..+.+|++|+||+|.+...||..++.+|.
T Consensus 307 Gg~~d~~d~~I~PTIL~DV~~~~p~M~eEIFGPiLPIi~v~~l~Eai~~In~~eKPLa~Y~Fs~n~~~vkr~l~~tsSGg 386 (477)
T KOG2456|consen 307 GGESDESDRYIAPTILLDVPEDSPVMQEEIFGPILPIITVQSLDEAINFINEREKPLALYIFSNNEKLVKRFLTETSSGG 386 (477)
T ss_pred CCccchhhcccCCeEEecCCCCChhhhhhhccCccceeEhhhHHHHHHHHhcCCCceEEEEecCCHHHHHHHHHhccCCC
Confidence 33221 1133 4 2 257899999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCCCCC--CCCCccCCccccccccCcccccccchhhcccEEEEEEecC
Q 005041 648 VFHNASTRF--CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGN 696 (717)
Q Consensus 648 v~iN~~~~~--~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v~~~~ 696 (717)
|.+|+...+ ...+||||.++||+| + ++|.+|++.|++.|++..+.
T Consensus 387 vt~ND~i~H~~~~~lPFGGVG~SGmG--~--YhGK~sFdTFSH~k~~l~rs 433 (477)
T KOG2456|consen 387 VTVNDVIMHVTLDSLPFGGVGESGMG--R--YHGKFSFDTFSHEKSCLLRS 433 (477)
T ss_pred eeecceEEEEEeeccCcCCcCccccc--c--ccccccccccccchhhhhcc
Confidence 999997643 467899999999996 3 56999999999999987653
No 105
>cd07104 ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins. ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences.
Probab=100.00 E-value=3.6e-69 Score=602.51 Aligned_cols=378 Identities=21% Similarity=0.239 Sum_probs=319.0
Q ss_pred hHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhhchhHHHHHHhhcChhHHHHHHHHH
Q 005041 294 GAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSI 373 (717)
Q Consensus 294 ~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~g~~~a~~~~~~~~~~~i~~~~~~~ 373 (717)
|+++++++|++||+.|+++|.++|.++|++++++|++|+++|++++++|++++.. ++ ..|+..+++.+
T Consensus 1 ~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~----~~--------~~ei~~~~~~l 68 (431)
T cd07104 1 DVDRAYAAAAAAQKAWAATPPQERAAILRKAAEILEERRDEIADWLIRESGSTRP----KA--------AFEVGAAIAIL 68 (431)
T ss_pred CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH----HH--------HHHHHHHHHHH
Confidence 5889999999999999999999999999999999999999999999888765432 21 23566667777
Q ss_pred HHHhcccc-cccccccccccCCCceEEEeecceeEEEEEcCC-Cch-hHHHHHHHHHHhCCEEEEeCCcchHHH-HHHHH
Q 005041 374 RILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRS-NAILH 449 (717)
Q Consensus 374 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGN~vVlKps~~tp~t-~~~l~ 449 (717)
++++...+ ..+...+.. ..+...+.+++|+|||++|+|| +|. ..++++++||++||+||+|||+.+|.+ +..+.
T Consensus 69 ~~~~~~~~~~~~~~~~~~--~~g~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~l~ 146 (431)
T cd07104 69 REAAGLPRRPEGEILPSD--VPGKESMVRRVPLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDSRTPVTGGLLIA 146 (431)
T ss_pred HHHHHHHHHhcCccccCC--CCCceeEEEEeeeeeEEEECCCCcHHHHHHHHHHHHHHcCCeEEeeCCCCChHHHHHHHH
Confidence 76654432 222222211 1344567889999999999998 685 567999999999999999999999998 56788
Q ss_pred HHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHhhcC---CCEEEecCCcceEEEcCCCC
Q 005041 450 KVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK---IPVLGHADGICHVYVDKSAN 524 (717)
Q Consensus 450 ~~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a~---~p~~lElGGk~p~iV~~dAD 524 (717)
+++.+ + +|+|++|+|++ +.++++.|..||++|+|+||||+.+|+.|++++. +|+++|||||||+||++|||
T Consensus 147 ~~l~~----aGlP~gvv~~v~g~~~~~~~~L~~~~~i~~V~ftGs~~~g~~v~~~aa~~~~~~~lelgG~~~~iV~~dad 222 (431)
T cd07104 147 EIFEE----AGLPKGVLNVVPGGGSEIGDALVEHPRVRMISFTGSTAVGRHIGELAGRHLKKVALELGGNNPLIVLDDAD 222 (431)
T ss_pred HHHHH----cCCCcccEEEeeCCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCcEEEEcCCCCeEEECCCCC
Confidence 88876 7 99999999995 5557788888999999999999999999988763 89999999999999999999
Q ss_pred HHHHHHHHHhhccCCCc-cccccceEEEcCcccChhhHHHHHHHHHHcCc------------------------------
Q 005041 525 LDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------------------------------ 573 (717)
Q Consensus 525 l~~A~~~i~~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~------------------------------ 573 (717)
++.|++.+++|+|.|+| .|++++|||||+++| |+|+++|+++++++.+
T Consensus 223 l~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~-~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~ 301 (431)
T cd07104 223 LDLAVSAAAFGAFLHQGQICMAAGRILVHESVY-DEFVEKLVAKAKALPVGDPRDPDTVIGPLINERQVDRVHAIVEDAV 301 (431)
T ss_pred HHHHHHHHHHHHHhcCCCCcccCcEEEEcHHHH-HHHHHHHHHHHHhcCcCCCCCCCCccCcccCHHHHHHHHHHHHHHH
Confidence 99999999999999987 999999999999999 8999999999887632
Q ss_pred ----eE-ecCccccccc-c-C-----CCCccccccccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEecCHHHHHHHHh
Q 005041 574 ----GL-FGGPRASKLL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLC 641 (717)
Q Consensus 574 ----~~-~g~~~~~~~~-p-i-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~I~t~d~~~a~~~~~ 641 (717)
++ .|+.....++ | | +++++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.++++
T Consensus 302 ~~G~~~~~gg~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~ 381 (431)
T cd07104 302 AAGARLLTGGTYEGLFYQPTVLSDVTPDMPIFREEIFGPVAPVIPFDDDEEAVELANDTEYGLSAAVFTRDLERAMAFAE 381 (431)
T ss_pred HCCCEEEeCCCCCCceECCEEeecCCCCChhhhCcCcCCeEEEEEECCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHH
Confidence 11 1222111123 5 2 357899999999999999999999999999999999999999999999999999
Q ss_pred cCCeeeEEEcCCCCCC-CCCccCCccccccccCcccccccchhhcccEEEEEEe
Q 005041 642 QVDSAAVFHNASTRFC-DGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILR 694 (717)
Q Consensus 642 ~l~~G~v~iN~~~~~~-~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v~~ 694 (717)
++++|.|+||+++... +.+||||.+.||+| +++|++|+++||+.|++++
T Consensus 382 ~l~~g~v~iN~~~~~~~~~~pfgG~~~SG~g----~~~g~~~l~~~~~~k~~~~ 431 (431)
T cd07104 382 RLETGMVHINDQTVNDEPHVPFGGVKASGGG----RFGGPASLEEFTEWQWITV 431 (431)
T ss_pred hcCcCeEEECCCCCCCCCCCCCCCcccccCC----ccchHHHHHHhhceeEEeC
Confidence 9999999999987554 57899999999875 3469999999999999853
No 106
>cd07128 ALDH_MaoC-N N-terminal domain of the monoamine oxidase C dehydratase. The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH.
Probab=100.00 E-value=1.5e-69 Score=610.37 Aligned_cols=392 Identities=18% Similarity=0.201 Sum_probs=321.3
Q ss_pred HHHHhcCCcceEEEecCCcccccHhhHHHHHHHHHHH-HHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
Q 005041 269 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARES-SRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQ 347 (717)
Q Consensus 269 l~~~~tg~~iGT~i~a~~~~~~~~~~v~~av~~A~~A-~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~ 347 (717)
..+|.+|+.++++.. . .+|+++|+++|++| |+.|+++|.++|+++|++++++|++|+++|+++ +.|++|+.
T Consensus 19 ~~nP~tg~~~~~~~~-~------~~dv~~Av~~A~~A~~~~W~~~~~~~Ra~~L~~~a~~l~~~~~~la~l-~~e~Gkp~ 90 (513)
T cd07128 19 LHDAVTGEVVARVSS-E------GLDFAAAVAYAREKGGPALRALTFHERAAMLKALAKYLMERKEDLYAL-SAATGATR 90 (513)
T ss_pred eECCCCCCEEEEEcC-C------HHHHHHHHHHHHHhhhchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHH-HHHcCCCH
Confidence 367889999998875 3 36999999999998 799999999999999999999999999999985 66665542
Q ss_pred hhchhHHHHHHhhcChhHHHHHHHHHHHHhcccccc---------cccccccccCCC-ceEEEeecc-eeEEEEEcCC-C
Q 005041 348 EAGYAKSLVSRLALKPGKISSLAKSIRILADMEEPI---------GQILKRTELADG-LILEKTSCP-LGVLLIVFES-R 415 (717)
Q Consensus 348 ~~g~~~a~~~~~~~~~~~i~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~-~~~~~~~~P-lGVV~~I~p~-~ 415 (717)
.++ ..|+..+++.+++|++..+.. ++..+.. ..+ ...+++++| +|||++|+|| |
T Consensus 91 ----~ea--------~~Ev~~~~~~~~~~a~~a~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~~GVv~~I~pwN~ 156 (513)
T cd07128 91 ----RDS--------WIDIDGGIGTLFAYASLGRRELPNAHFLVEGDVEPLS--KDGTFVGQHILTPRRGVAVHINAFNF 156 (513)
T ss_pred ----HHH--------HHHHHHHHHHHHHHHHHHHhhccccccccCCcccccC--CCccccceEEEEecccEEEEECCccc
Confidence 122 125666667777766543221 1211110 111 134577999 5999999998 6
Q ss_pred ch-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecC
Q 005041 416 PD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGS 492 (717)
Q Consensus 416 P~-~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs 492 (717)
|. +.+++++|||++||+||+|||+.||+++.++++++.++ . ||+|++|+|+| +..+++.| +.+|+|+||||
T Consensus 157 P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~ea---G~lP~gv~~~v~g~~~~~~~~l---~~~d~v~fTGS 230 (513)
T cd07128 157 PVWGMLEKFAPALLAGVPVIVKPATATAYLTEAVVKDIVES---GLLPEGALQLICGSVGDLLDHL---GEQDVVAFTGS 230 (513)
T ss_pred HHHHHHHHHHHHHHcCCEEEEECCCCCCHHHHHHHHHHHHh---CCCCCCcEEEecCChHHHhccc---CCCCEEEEECC
Confidence 85 56799999999999999999999999999999999972 3 79999999996 33343333 46899999999
Q ss_pred HHHHHHHHhhc-----CCCEEEecCCcceEEEcCCCC-----HHHHHHHHHhhccCCCc-cccccceEEEcCcccChhhH
Q 005041 493 NKLVSQIKEST-----KIPVLGHADGICHVYVDKSAN-----LDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGAL 561 (717)
Q Consensus 493 ~~~g~~i~~~a-----~~p~~lElGGk~p~iV~~dAD-----l~~A~~~i~~~~~~n~g-~C~a~~rv~V~~~i~d~~f~ 561 (717)
+++|++|++.+ .+|+++|||||||+||++||| +|.|++.+++++|.|+| +|++++|+|||+++| |+|+
T Consensus 231 ~~~G~~i~~~a~~a~~~~~~~lElGGknp~IV~~DAd~~~~dld~aa~~iv~~~f~~aGQ~C~a~~rv~V~~~i~-d~f~ 309 (513)
T cd07128 231 AATAAKLRAHPNIVARSIRFNAEADSLNAAILGPDATPGTPEFDLFVKEVAREMTVKAGQKCTAIRRAFVPEARV-DAVI 309 (513)
T ss_pred HHHHHHHHHHhhhhccCceEEEeccCcCcEEECCCCCcchhhHHHHHHHHHHHHHHhcCCcccCCceEEEehHHH-HHHH
Confidence 99999999863 389999999999999999999 99999999999999987 999999999999999 8999
Q ss_pred HHHHHHHHHcCc---------------------------------eE-ecCccc---------cc-cc-c-C-----C--
Q 005041 562 NELVVELQHEGV---------------------------------GL-FGGPRA---------SK-LL-Q-I-----P-- 588 (717)
Q Consensus 562 ~~l~~~~~~~~~---------------------------------~~-~g~~~~---------~~-~~-p-i-----~-- 588 (717)
++|+++++++.+ ++ +|+... .+ |+ | | +
T Consensus 310 ~~l~~~~~~l~~G~p~~~~~~lGpli~~~~~~~i~~~i~~a~~~A~vl~GG~~~~~~~~~~~~~g~~~~PTvl~~v~~~~ 389 (513)
T cd07128 310 EALKARLAKVVVGDPRLEGVRMGPLVSREQREDVRAAVATLLAEAEVVFGGPDRFEVVGADAEKGAFFPPTLLLCDDPDA 389 (513)
T ss_pred HHHHHHHHhcccCCCccCCCCcCCCCCHHHHHHHHHHHHHHHhCCEEEECCCccccccCCCCCCCEEECCEEEeccCCcc
Confidence 999999987631 11 244321 23 34 5 2 2
Q ss_pred CCccccccccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEecCHHHHHHHHhcCC--eeeEEEcCCCC---------CC
Q 005041 589 ETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVD--SAAVFHNASTR---------FC 657 (717)
Q Consensus 589 ~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~--~G~v~iN~~~~---------~~ 657 (717)
.|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++++++++ +|+||||+... ..
T Consensus 390 ~~~i~~eE~FGPVl~V~~~~~~deai~~aN~~~~gL~asvft~d~~~~~~~~~~l~~~~G~v~IN~~~~~~~~~~~~~~~ 469 (513)
T cd07128 390 ATAVHDVEAFGPVATLMPYDSLAEAIELAARGRGSLVASVVTNDPAFARELVLGAAPYHGRLLVLNRDSAKESTGHGSPL 469 (513)
T ss_pred cchHHhCCCcCCeEEEEeeCCHHHHHHHHhcCCCCeeEEEEeCCHHHHHHHHHHHHhhCCEEEEcCCccccccccccCCC
Confidence 26889999999999999999999999999999999999999999999999999997 99999998641 23
Q ss_pred CCCccCCccccccccCcccc-cccchhhcccEEEEEE
Q 005041 658 DGARFGLGAEVGISTSRIHA-RGPVGVEGLLTTRWIL 693 (717)
Q Consensus 658 ~~~pfG~g~~~G~~~~~~~~-~g~~g~~~ft~~k~v~ 693 (717)
+.+||||.+.||+|. + +|.+|+++|++.|+|.
T Consensus 470 ~~~pfGG~k~SG~G~----~~gg~~~l~~~~~~k~v~ 502 (513)
T cd07128 470 PQLVHGGPGRAGGGE----ELGGLRGVKHYMQRTAVQ 502 (513)
T ss_pred CCCCCCCcccCCCCc----ccccHHHHHHhheeeeee
Confidence 568999999999863 3 3689999999999875
No 107
>TIGR02278 PaaN-DH phenylacetic acid degradation protein paaN. This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species.
Probab=100.00 E-value=3.2e-69 Score=624.01 Aligned_cols=396 Identities=17% Similarity=0.166 Sum_probs=326.2
Q ss_pred HHHHhcCCcceEEEecCCcccccHhhHHHHHHHHHHH-HHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
Q 005041 269 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARES-SRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQ 347 (717)
Q Consensus 269 l~~~~tg~~iGT~i~a~~~~~~~~~~v~~av~~A~~A-~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~ 347 (717)
..+|.+++.++++..++ . |+++|+++|++| |+.|+++|..+|+++|++++++|++|+++|++ +++|+||+.
T Consensus 19 v~nP~tg~~i~~~~~~~------~-dv~~Av~~A~~aa~~~W~~~~~~eR~~~L~~~a~~l~~~~~ela~-~~~e~GK~~ 90 (663)
T TIGR02278 19 VRDASTGEVLARVTSEG------L-DVAAAVAWAREVGGPALRALTFHERARMLKALAQYLSERKEALYA-LAATTGATR 90 (663)
T ss_pred ccCCCCCCEEEEEcCCc------H-HHHHHHHHHHHhcchhhhcCCHHHHHHHHHHHHHHHHHHHHHHHH-HHHHcCCCH
Confidence 46788999999987766 3 899999999996 99999999999999999999999999999998 466655442
Q ss_pred hhchhHHHHHHhhcChhHHHHHHHHHHHHhccccc---------ccccccccccCCCceEEEeecce-eEEEEEcCC-Cc
Q 005041 348 EAGYAKSLVSRLALKPGKISSLAKSIRILADMEEP---------IGQILKRTELADGLILEKTSCPL-GVLLIVFES-RP 416 (717)
Q Consensus 348 ~~g~~~a~~~~~~~~~~~i~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~Pl-GVV~~I~p~-~P 416 (717)
.++ ..|+..+++.+++++...+. .|+..+.. .+.+...+++|+|+ |||++|+|| ||
T Consensus 91 ----~~a--------~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~P~~Gvv~~I~pwN~P 157 (663)
T TIGR02278 91 ----RDN--------WVDIDGGIGTLFTYSSLGRRELPDANLIPEDEFEPLS-KDGSFQGRHILTPKGGVAVQINAFNFP 157 (663)
T ss_pred ----HHH--------HHHHHHHHHHHHHHHHhhhhhccccccccCCceeccC-CCCccceEEEEEeCCceEEEEcCCchH
Confidence 122 23777888888888765432 12222211 01122457889998 999999998 68
Q ss_pred h-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecCCChhhhhhcCCCCccEEEeecCHH
Q 005041 417 D-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNK 494 (717)
Q Consensus 417 ~-~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~v~~v~fTGs~~ 494 (717)
. +++++++|||++||+||+|||+.||+++.++++++.++ . +|+|+||+|+|. .++++..++++|+|+||||++
T Consensus 158 ~~~~~~~~~~ALaaGN~Vv~KPs~~tp~~~~~l~~~~~~a---G~lP~gv~~~v~g~--~~~~~~~~~~~~~V~FTGS~~ 232 (663)
T TIGR02278 158 VWGLLEKFAPAFLAGVPTLAKPATPTAYVAEALVRTMVES---GLLPEGSLQLICGS--AGDLLDHLDHRDVVAFTGSAA 232 (663)
T ss_pred HHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHh---CCCCCCcEEEEeCC--hHHHHhcCCCCCEEEEECCHH
Confidence 5 56799999999999999999999999999999999873 3 899999999963 233444446789999999999
Q ss_pred HHHHHHhhc-----CCCEEEecCCcceEEEcCCCC-----HHHHHHHHHhhccCCCc-cccccceEEEcCcccChhhHHH
Q 005041 495 LVSQIKEST-----KIPVLGHADGICHVYVDKSAN-----LDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNE 563 (717)
Q Consensus 495 ~g~~i~~~a-----~~p~~lElGGk~p~iV~~dAD-----l~~A~~~i~~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~ 563 (717)
+|++|++.+ .+|+++|||||||+||++||| +|.|++.+++|+|.|+| +|+|++|||||+++| |+|+++
T Consensus 233 ~G~~i~~~aaaa~~~~~~~lELGGk~p~IV~~dAd~~~~dl~~aa~~i~~~~f~~sGQ~C~a~~rv~V~~~i~-d~f~~~ 311 (663)
T TIGR02278 233 TADRLRAHPNVLERGIRFNAEADSLNAAILGEDATPDEPEFDLFAQEIVRELTIKAGQKCTAIRRVIVPKALL-EAVLKA 311 (663)
T ss_pred HHHHHHHhHhHHhcCceEEEEcCCCCeEEEcCCCCccchhHHHHHHHHHHHHHhcCCCCccCCceEEEeHHHH-HHHHHH
Confidence 999998853 389999999999999999999 99999999999999987 999999999999999 899999
Q ss_pred HHHHHHHcCc----------------------------------eE-ecCccc-cc-cc-c-C-----CCC-cccccccc
Q 005041 564 LVVELQHEGV----------------------------------GL-FGGPRA-SK-LL-Q-I-----PET-RLFHHEYN 598 (717)
Q Consensus 564 l~~~~~~~~~----------------------------------~~-~g~~~~-~~-~~-p-i-----~~~-~~~~eE~F 598 (717)
|+++++++.+ ++ +|+... .+ |+ | | ++| ++++||+|
T Consensus 312 l~~~~~~l~vG~p~~~~t~~Gpli~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~~g~~~~PTvl~~~~~~~~~i~~eE~F 391 (663)
T TIGR02278 312 LQARLAKVVLGDPREEGVDMGPLVSLEQRADVEAAVAALLAAGAEVRLGGPGRLDGAFFPPTLLLAEDPWAGAVHATEAF 391 (663)
T ss_pred HHHHHHhccCCCccccCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCCeeEccEEEeeCCcchhhHHhcccc
Confidence 9999987632 11 244321 23 33 6 2 234 68999999
Q ss_pred CceEEEEEeCCHHHHHHHHHhcCCCceeEEEecCHHHHHHHHhcC--CeeeEEE-cCCC-----C---CCCCCccCCccc
Q 005041 599 SMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQV--DSAAVFH-NAST-----R---FCDGARFGLGAE 667 (717)
Q Consensus 599 GPVl~v~~~~~~deAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l--~~G~v~i-N~~~-----~---~~~~~pfG~g~~ 667 (717)
|||++|++|+|+||||+++|+++|||++||||+|.++++++++++ ++|+||| |.+. . ..+.+||||.|.
T Consensus 392 GPVl~V~~~~~~~eai~~aN~~~~gL~a~vft~d~~~~~~~~~~l~~~~G~v~InN~~~~~~~~~~~~~~~~~pfGG~k~ 471 (663)
T TIGR02278 392 GPVATFFPYGDRAEAARLAARGGGSLVATLATSDPEEARQFILGLAPYHGRLHILNRDDAAESTGHGSPLPRLLHGGPGR 471 (663)
T ss_pred CCeEEEEeeCCHHHHHHHHHcCCCCceEEEEeCCHHHHHHHHHHHHhhCCEEEECCCcccccccCCCCCCCCCCCCCCcc
Confidence 999999999999999999999999999999999999999999999 8999999 6421 1 124679999999
Q ss_pred cccccCcccc-cccchhhcccEEEEEEec
Q 005041 668 VGISTSRIHA-RGPVGVEGLLTTRWILRG 695 (717)
Q Consensus 668 ~G~~~~~~~~-~g~~g~~~ft~~k~v~~~ 695 (717)
||+|. + +|.+++++|++.|+|..-
T Consensus 472 SG~G~----~~g~~~~l~~f~~~k~v~~~ 496 (663)
T TIGR02278 472 AGGGE----ELGGLRSVKHYMQRTAIQGS 496 (663)
T ss_pred CcCCC----ccchHHHHHHhceeEEEEcC
Confidence 99863 3 357999999999999764
No 108
>cd07081 ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldehyde dehydrogenase (ACDH), Ethanolamine utilization protein EutE, and related proteins. Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA. The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH, and may be critical enzymes in the fermentative pathway.
Probab=100.00 E-value=8.1e-69 Score=593.53 Aligned_cols=381 Identities=16% Similarity=0.176 Sum_probs=299.8
Q ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhhchhHHHHHHhhcChhHHHHHHH--H
Q 005041 295 AREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAK--S 372 (717)
Q Consensus 295 v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~g~~~a~~~~~~~~~~~i~~~~~--~ 372 (717)
+++|+++|++||+.|+++|+.+|.++|++++++|++|+++|++++++|+||+.. ++.. ++..++. .
T Consensus 1 ~~~Ai~~A~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~----ea~~--------~~~~~~~~~~ 68 (439)
T cd07081 1 LDDAVAAAKVAQQGLSCKSQEMVDLIFRAAAEAAEDARIDLAKLAVSETGMGRV----EDKV--------IKNHFAAEYI 68 (439)
T ss_pred CHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChH----HHHH--------HHHHHHHHHH
Confidence 468999999999999999999999999999999999999999999888776532 2211 1222222 1
Q ss_pred HHHHhcccccccccccccccCCCceEEEeecceeEEEEEcCC-Cch-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHH
Q 005041 373 IRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHK 450 (717)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~ 450 (717)
.++++.. ..+...+. ..+...+++|+|+|||++|+|| ||. +.+++++|||++||+||+||||+||+|+.++++
T Consensus 69 ~~~~~~~--~~~~~~~~---~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~ 143 (439)
T cd07081 69 YNVYKDE--KTCGVLTG---DENGGTLIIAEPIGVVASITPSTNPTSTVIFKSLISLKTRNSIIFSPHPRAKKVTQRAAT 143 (439)
T ss_pred HHHHhcc--ccCceecC---CCCCceEEEEecceEEEEECCCcchHHHHHHHHHHHHhcCCeEEEECCccchHHHHHHHH
Confidence 2333321 11222111 1123457889999999999998 785 667999999999999999999999999999999
Q ss_pred HHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHhhcCCCEEEecCCcceEEEcCCCCHHHH
Q 005041 451 VITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVA 528 (717)
Q Consensus 451 ~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a~~p~~lElGGk~p~iV~~dADl~~A 528 (717)
++.+++.++ +|+|+||+|++ +.++++.|..||+|++|+||||+++.+..++ ..||+++|||||||+||++|||+|.|
T Consensus 144 l~~~~l~~aG~P~gvv~~v~g~~~~~g~~L~~~~~V~~V~FTGs~~v~~~aa~-~~k~~~lElGGk~p~IV~~dADl~~A 222 (439)
T cd07081 144 LLLQAAVAAGAPENLIGWIDNPSIELAQRLMKFPGIGLLLATGGPAVVKAAYS-SGKPAIGVGAGNTPVVIDETADIKRA 222 (439)
T ss_pred HHHHHHHHcCCChhhEEEEcCCCHHHHHHHHcCCCCCEEEEECCHHHHHHHHh-cCCCEEEEcCCCCeEEEcCCCCHHHH
Confidence 999988889 99999999996 5567888889999999999999997665543 36899999999999999999999999
Q ss_pred HHHHHhhccCCCc-cccccceEEEcCcccChhhHHHHHHHHHH-------------------cCceEecCcc-----ccc
Q 005041 529 KNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQH-------------------EGVGLFGGPR-----ASK 583 (717)
Q Consensus 529 ~~~i~~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~-------------------~~~~~~g~~~-----~~~ 583 (717)
++.+++|+|.|+| +|+|.+|+|||++|| |+|+++|++++.- .|..+.|+.. ..+
T Consensus 223 a~~iv~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~gg~~~~~~~~~G 301 (439)
T cd07081 223 VQSIVKSKTFDNGVICASEQSVIVVDSVY-DEVMRLFEGQGAYKLTAEELQQVQPVILKNGDVNRDIVGQDAYKIAAAAG 301 (439)
T ss_pred HHHHHHHHhcCCCCCCCCCCEEEEcHHHH-HHHHHHHHHcCCccCCHHHHHHHHHHHHhcCCcCCcccCCCHHHHHHHcC
Confidence 9999999999987 999999999999999 8999999886411 1233333321 012
Q ss_pred cc--c----C-------CCCccccccccCceEEEEEeCCHHHHHHHHHhc----CCCceeEEEecC---HHHHHHHHhcC
Q 005041 584 LL--Q----I-------PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQH----GSAHTDCIVAED---QKVAETFLCQV 643 (717)
Q Consensus 584 ~~--p----i-------~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~----~~GL~a~I~t~d---~~~a~~~~~~l 643 (717)
++ | + ++|++++||+||||++|++|+|+||||+++|++ +|||+++|||+| .++++++++++
T Consensus 302 ~~~~pt~~~i~~~~~~~~~~~i~~eE~FGPVl~v~~~~~~dEAi~~aN~~~n~~~~GLsa~V~T~d~~~~~~a~~~a~~l 381 (439)
T cd07081 302 LKVPQETRILIGEVTSLAEHEPFAHEKLSPVLAMYRAANFADADAKALALKLEGGCGHTSAMYSDNIKAIENMNQFANAM 381 (439)
T ss_pred CccCCCceEEEEecCCCCCCchhhhCccCceEEEEEcCCHHHHHHHHHHHhhccCCCceEEEECCCcchHHHHHHHHhhC
Confidence 22 2 1 468999999999999999999999999999976 799999999999 99999999999
Q ss_pred CeeeEEEcCCCCCC---CCCccCCccccccccCcccc---cccchhhcccEEEEEEe
Q 005041 644 DSAAVFHNASTRFC---DGARFGLGAEVGISTSRIHA---RGPVGVEGLLTTRWILR 694 (717)
Q Consensus 644 ~~G~v~iN~~~~~~---~~~pfG~g~~~G~~~~~~~~---~g~~g~~~ft~~k~v~~ 694 (717)
++|+|+||.++... ....||+...+-+|++..+. .-..+.++|+++|.+.+
T Consensus 382 ~~G~V~iN~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (439)
T cd07081 382 KTSRFVKNGPCSQGGLGDLYNFRGWPSMTLGCGTWGGNSVSENVGPKHLVNLKTVAL 438 (439)
T ss_pred CceEEEEeCCccccccccccCCCCCeeEeeecCCCCCCCcCCCCChHhhheeeeeec
Confidence 99999999876321 11234444333222211111 12356899999998865
No 109
>PRK11904 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed
Probab=100.00 E-value=1.5e-68 Score=638.54 Aligned_cols=428 Identities=19% Similarity=0.178 Sum_probs=354.6
Q ss_pred HHHHHHHHHHHHcCCc--EEEEeCCC-cchHHHHhcCC-cceEEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHH
Q 005041 242 TAKVNAAYCAACAGIP--VVITSGFA-MDSIIKVLEGK-RVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDR 317 (717)
Q Consensus 242 ~~Kv~aa~~a~~~gi~--v~I~~g~~-~~~l~~~~tg~-~iGT~i~a~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R 317 (717)
..+++++....+...- -.|++|.. ...+.+|.+++ .+|++..++ .+++++|+++|++||+.|+++|.++|
T Consensus 536 ~~~~~~al~~~~~~~~~~~~~i~g~~~~~~v~nP~~~~~~vg~v~~a~------~~~v~~Ai~aA~~A~~~W~~~~~~~R 609 (1038)
T PRK11904 536 LEPLAAAIAAFLEKQWQAGPIINGEGEARPVVSPADRRRVVGEVAFAD------AEQVEQALAAARAAFPAWSRTPVEER 609 (1038)
T ss_pred HHHHHHHHHHHHhcCceecceEcCCCCeEEEECCCCCCeeEEEEeCCC------HHHHHHHHHHHHHHHHHhccCCHHHH
Confidence 4556666665554321 23446621 12347888877 789999888 89999999999999999999999999
Q ss_pred HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhhchhHHHHHHhhcChhHHHHHHHHHHHHhcccccc-cccccccccCCCc
Q 005041 318 RKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRILADMEEPI-GQILKRTELADGL 396 (717)
Q Consensus 318 ~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~g~~~a~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 396 (717)
+++|++++++|++++++|++++++|.||+.. ++ ..|+..+++.+++|+...+.. +...+. ..+.+.
T Consensus 610 a~iL~kaAdll~~~~~eL~~l~~~E~GK~~~----~a--------~~EV~eaid~lr~ya~~a~~~~~~~~~l-~g~~ge 676 (1038)
T PRK11904 610 AAILERAADLLEANRAELIALCVREAGKTLQ----DA--------IAEVREAVDFCRYYAAQARRLFGAPEKL-PGPTGE 676 (1038)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHhCCCHH----HH--------HHHHHHHHHHHHHHHHHHHHhhCCCccc-CCCCCc
Confidence 9999999999999999999998887765422 22 347888888888887654322 221111 112345
Q ss_pred eEEEeecceeEEEEEcCC-Cch-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CC
Q 005041 397 ILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-RE 472 (717)
Q Consensus 397 ~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~-~~ 472 (717)
..+.+++|+|||++|+|| ||. +.++++++||++||+||+|||++||+++..+.+++++ + +|+|++|+|+| ++
T Consensus 677 ~n~~~~~P~GVv~~IsPwNfPlai~~~~i~aALaaGNtVIlKPse~tpl~a~~l~~ll~e----AGlP~gvl~lv~G~g~ 752 (1038)
T PRK11904 677 SNELRLHGRGVFVCISPWNFPLAIFLGQVAAALAAGNTVIAKPAEQTPLIAAEAVKLLHE----AGIPKDVLQLLPGDGA 752 (1038)
T ss_pred eeEEEEecceEEEEECCCccHHHHHHHHHHHHHHcCCEEEeeCCCcCHHHHHHHHHHHHH----hCcCcceEEEeeCCch
Confidence 567889999999999998 786 5678999999999999999999999999999999987 7 99999999996 56
Q ss_pred hhhhhhcCCCCccEEEeecCHHHHHHHHhhc------CCCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccc
Q 005041 473 EIPDLLKLDDVIDLVIPRGSNKLVSQIKEST------KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNA 545 (717)
Q Consensus 473 ~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a------~~p~~lElGGk~p~iV~~dADl~~A~~~i~~~~~~n~g-~C~a 545 (717)
++++.|..||+|++|+||||+++|+.|++.+ .+|+++|+|||||+||++|||+|+|++.+++|+|.|+| .|+|
T Consensus 753 ~vg~~Lv~~p~v~~V~FTGS~~~g~~I~~~~A~~~g~~~pvi~ElGGkNa~IV~~dAdld~Av~~iv~saF~~aGQ~CsA 832 (1038)
T PRK11904 753 TVGAALTADPRIAGVAFTGSTETARIINRTLAARDGPIVPLIAETGGQNAMIVDSTALPEQVVDDVVTSAFRSAGQRCSA 832 (1038)
T ss_pred HHHHHHhcCCCcCeEEEECCHHHHHHHHHHHhhccCCCceEEEEcCCcCeEEECCCCCHHHHHHHHHHHHHhCCCCcccc
Confidence 6888899999999999999999999997654 26999999999999999999999999999999999987 9999
Q ss_pred cceEEEcCcccChhhHHHHHHHHHHcCce---------------------------------E-ecCccc----cccc--
Q 005041 546 METLLVHKDLACNGALNELVVELQHEGVG---------------------------------L-FGGPRA----SKLL-- 585 (717)
Q Consensus 546 ~~rv~V~~~i~d~~f~~~l~~~~~~~~~~---------------------------------~-~g~~~~----~~~~-- 585 (717)
++|+|||++|| |+|+++|+++++++.+. + .|+... .++|
T Consensus 833 ~~rl~V~~si~-d~fl~~L~~~~~~l~vGdp~d~~t~~GPvI~~~a~~~l~~~I~~a~~ga~vl~gg~~~~~~~~G~fv~ 911 (1038)
T PRK11904 833 LRVLFVQEDIA-DRVIEMLKGAMAELKVGDPRLLSTDVGPVIDAEAKANLDAHIERMKREARLLAQLPLPAGTENGHFVA 911 (1038)
T ss_pred CcEEEEeHHHH-HHHHHHHHHHHHhccCCCcccccCCccCCCCHHHHHHHHHHHHHHHcCCEEEeCCCCCCCCCCceEEe
Confidence 99999999999 79999999999876421 1 122211 1333
Q ss_pred c-C---CCCccccccccCceEEEEEeC--CHHHHHHHHHhcCCCceeEEEecCHHHHHHHHhcCCeeeEEEcCCCCCC--
Q 005041 586 Q-I---PETRLFHHEYNSMVCTVEIVD--DVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFC-- 657 (717)
Q Consensus 586 p-i---~~~~~~~eE~FGPVl~v~~~~--~~deAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~v~iN~~~~~~-- 657 (717)
| | +++.+++||+||||++|++|+ |+||||+++|+++|||++||||+|.+++.++++++++|+||||+.+...
T Consensus 912 PTvi~~~~~~~~~eEiFGPVL~V~~~~~~~ldeaI~~iN~t~yGLt~~IfS~d~~~~~~~~~~l~aG~vyIN~~~~ga~v 991 (1038)
T PRK11904 912 PTAFEIDSISQLEREVFGPILHVIRYKASDLDKVIDAINATGYGLTLGIHSRIEETADRIADRVRVGNVYVNRNQIGAVV 991 (1038)
T ss_pred eEEEccCCcHHhCCCCcCcEEEEEEeCCCCHHHHHHHHhCCCCCCEEEEEcCCHHHHHHHHHhCCEEEEEEeCCCccCCC
Confidence 6 3 457789999999999999997 7999999999999999999999999999999999999999999876543
Q ss_pred CCCccCCccccccccCcccccccchhhcccEEEEEEecC
Q 005041 658 DGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGN 696 (717)
Q Consensus 658 ~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v~~~~ 696 (717)
...||||.+.||+|. ..+|++++++|++.|+|.++.
T Consensus 992 g~qPFGG~~~SG~G~---kaGG~~~L~~f~~~ktv~~~~ 1027 (1038)
T PRK11904 992 GVQPFGGQGLSGTGP---KAGGPHYLLRFATEKTVTVNT 1027 (1038)
T ss_pred CCCCCCCCCCCCCCC---ccchHHHHHHHhceEEEEEcc
Confidence 346999999998862 246899999999999998864
No 110
>PRK11903 aldehyde dehydrogenase; Provisional
Probab=100.00 E-value=2e-68 Score=603.03 Aligned_cols=395 Identities=16% Similarity=0.171 Sum_probs=324.1
Q ss_pred HHHhcCCcceEEEecCCcccccHhhHHHHHHHHHHHH-HHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHh
Q 005041 270 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESS-RRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 348 (717)
Q Consensus 270 ~~~~tg~~iGT~i~a~~~~~~~~~~v~~av~~A~~A~-~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~ 348 (717)
.+|.+++.++++.. + .+|+++|+++|++|| +.|+++|..+|+++|++++++|++|+++|++++++|.||+..
T Consensus 24 ~nP~tge~l~~v~~-~------~~dv~~Av~aA~~A~~~~W~~~~~~eR~~~L~~~a~~l~~~~~ela~~~~~e~Gkp~~ 96 (521)
T PRK11903 24 FDPVTGEELVRVSA-T------GLDLAAAFAFAREQGGAALRALTYAQRAALLAAIVKVLQANRDAYYDIATANSGTTRN 96 (521)
T ss_pred ECCCCCCEEEEecC-C------hHHHHHHHHHHHHhhhhhhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHH
Confidence 56889999999875 5 689999999999995 999999999999999999999999999999998877665421
Q ss_pred hchhHHHHHHhhcChhHHHHHHHHHHHHhcccccc-cccccccc--cC----CCceEEEeecc-eeEEEEEcCC-Cch-h
Q 005041 349 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEPI-GQILKRTE--LA----DGLILEKTSCP-LGVLLIVFES-RPD-A 418 (717)
Q Consensus 349 ~g~~~a~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~--~~----~~~~~~~~~~P-lGVV~~I~p~-~P~-~ 418 (717)
++ ..|+..+++.+++++...+.. +....... .+ .....+++|+| +|||++|+|| ||. +
T Consensus 97 ----~a--------~~ev~~~i~~l~~~a~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~pwN~P~~~ 164 (521)
T PRK11903 97 ----DS--------AVDIDGGIFTLGYYAKLGAALGDARLLRDGEAVQLGKDPAFQGQHVLVPTRGVALFINAFNFPAWG 164 (521)
T ss_pred ----HH--------HHHHHHHHHHHHHHHHHHHHcCCCcccCCCccccccccccccceEEEecCcceEEEECCcchHHHH
Confidence 21 246778888888877644322 11110000 00 11223567899 6999999998 685 5
Q ss_pred HHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHH
Q 005041 419 LVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLV 496 (717)
Q Consensus 419 ~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g 496 (717)
+.++++|||++||+||+|||+.||+++..+++++.++ . ||+|+||+|+| ++++++.| +++|+|+||||+++|
T Consensus 165 ~~~~~~~ALaaGN~VV~KPs~~tp~~~~~l~~~~~~a---g~lP~gv~~~v~g~~~~~~~~l---~~v~~v~fTGS~~~G 238 (521)
T PRK11903 165 LWEKAAPALLAGVPVIVKPATATAWLTQRMVKDVVAA---GILPAGALSVVCGSSAGLLDHL---QPFDVVSFTGSAETA 238 (521)
T ss_pred HHHHHHHHHHcCCeEEEEcCCcChHHHHHHHHHHHHh---CCCCcCceEEeeCCchHHHhcc---cCCCEEEEECCHHHH
Confidence 6789999999999999999999999999999999873 4 89999999996 44555444 689999999999999
Q ss_pred HHHHhhc-----CCCEEEecCCcceEEEcCCCC-----HHHHHHHHHhhccCCCc-cccccceEEEcCcccChhhHHHHH
Q 005041 497 SQIKEST-----KIPVLGHADGICHVYVDKSAN-----LDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELV 565 (717)
Q Consensus 497 ~~i~~~a-----~~p~~lElGGk~p~iV~~dAD-----l~~A~~~i~~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~ 565 (717)
+.|++.+ .+|++||||||||+||++||| +|.|++.+++|+|.|+| +|++++|+|||+++| |+|+++|+
T Consensus 239 ~~v~~~aa~~~~~~~~~lElGGknp~IV~~dAd~~~~~~~~aa~~i~~~~f~~sGQ~C~a~~rv~V~~~i~-d~f~~~L~ 317 (521)
T PRK11903 239 AVLRSHPAVVQRSVRVNVEADSLNSALLGPDAAPGSEAFDLFVKEVVREMTVKSGQKCTAIRRIFVPEALY-DAVAEALA 317 (521)
T ss_pred HHHHhhhhhhccCceeEeeccccCceEEccCCcccchhHHHHHHHHHHHHHhccCCCccCCeEEEEehhHH-HHHHHHHH
Confidence 9998853 389999999999999999999 59999999999999987 999999999999999 89999999
Q ss_pred HHHHHcCc---------------------------------eE-ecCccc--------cc-cc-c-C-----C--CCccc
Q 005041 566 VELQHEGV---------------------------------GL-FGGPRA--------SK-LL-Q-I-----P--ETRLF 593 (717)
Q Consensus 566 ~~~~~~~~---------------------------------~~-~g~~~~--------~~-~~-p-i-----~--~~~~~ 593 (717)
++++++.+ ++ .|+... .+ |+ | | + ++.++
T Consensus 318 ~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~~~~ga~vl~gg~~~~~~~~~~~~g~~~~PTvl~~~~~~~~~~i~ 397 (521)
T PRK11903 318 ARLAKTTVGNPRNDGVRMGPLVSRAQLAAVRAGLAALRAQAEVLFDGGGFALVDADPAVAACVGPTLLGASDPDAATAVH 397 (521)
T ss_pred HHHHhccCCCCCCCcCccCCCCCHHHHHHHHHHHHHHhcCCEEEECCccCCCCCCCCCCCeEEcCEEEeccCCCccchHH
Confidence 99987632 11 244221 13 33 5 2 1 25788
Q ss_pred cccccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEecCHHHHHHHHhcC--CeeeEEEcCCCC---------CCCCCcc
Q 005041 594 HHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQV--DSAAVFHNASTR---------FCDGARF 662 (717)
Q Consensus 594 ~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l--~~G~v~iN~~~~---------~~~~~pf 662 (717)
+||+||||++|++|+|+||||+++|+++|||++||||+|.+++.++++++ ++|+|+||+++. ..+.+||
T Consensus 398 ~eE~FGPvl~V~~~~~~~eai~~~N~~~~gL~asvft~d~~~~~~~~~~l~~~~G~V~iN~~~~~~~~~~~~~~~~~~Pf 477 (521)
T PRK11903 398 DVEVFGPVATLLPYRDAAHALALARRGQGSLVASVYSDDAAFLAAAALELADSHGRVHVISPDVAALHTGHGNVMPQSLH 477 (521)
T ss_pred hCcccCCeEEEEeeCCHHHHHHHHhcCCCCceEEEEeCCHHHHHHHHHHHHHhCCEEEEcCcccccccccCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999 999999997542 2346799
Q ss_pred CCccccccccCcccc-cccchhhcccEEEEEEe
Q 005041 663 GLGAEVGISTSRIHA-RGPVGVEGLLTTRWILR 694 (717)
Q Consensus 663 G~g~~~G~~~~~~~~-~g~~g~~~ft~~k~v~~ 694 (717)
||.|.||+|+ + +|.+++++||+.|+|.-
T Consensus 478 GG~k~SG~Gr----~~g~~~~l~~~t~~~~~~~ 506 (521)
T PRK11903 478 GGPGRAGGGE----ELGGLRALAFYHRRSAVQA 506 (521)
T ss_pred CCCCcCcCCc----ccccHHHHHHHhccceeeC
Confidence 9999999863 3 34789999999877654
No 111
>PRK10090 aldehyde dehydrogenase A; Provisional
Probab=100.00 E-value=3.1e-68 Score=586.25 Aligned_cols=353 Identities=19% Similarity=0.199 Sum_probs=299.1
Q ss_pred HHHHHHHHHHCHHHHHHHHHHHHHHHHhhchhHHHHHHhhcChhHHHHHHHHHHHHhcccccc-cccccccccCCCceEE
Q 005041 321 LLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRILADMEEPI-GQILKRTELADGLILE 399 (717)
Q Consensus 321 L~~~a~~l~~~~~el~~~~~~d~~~~~~~g~~~a~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 399 (717)
|++++++|++|+++|++++++|++|+.. ++ ..|+..+++.+++++.+.+.. +...+. ...+...+
T Consensus 1 L~~~a~~l~~~~~el~~~~~~e~Gk~~~----ea--------~~Ev~~~~~~~~~~a~~~~~~~~~~~~~--~~~~~~~~ 66 (409)
T PRK10090 1 LRKIAAGIRERASEISALIVEEGGKIQQ----LA--------EVEVAFTADYIDYMAEWARRYEGEIIQS--DRPGENIL 66 (409)
T ss_pred CHHHHHHHHHCHHHHHHHHHHhcCCCHH----HH--------HHHHHHHHHHHHHHHHHHHHhcCcccCC--CCCCceeE
Confidence 5789999999999999999888766532 22 236667777777776554322 222211 11233567
Q ss_pred EeecceeEEEEEcCC-Cch-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CChhh
Q 005041 400 KTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIP 475 (717)
Q Consensus 400 ~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~-~~~~~ 475 (717)
++++|+|||++|+|| ||. +.++++++||++||+||+|||+.+|+|+..+++++.+ + ||+|++|+|+| +.+++
T Consensus 67 ~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~----aglP~gv~~~v~g~~~~~~ 142 (409)
T PRK10090 67 LFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDE----IGLPKGVFNLVLGRGETVG 142 (409)
T ss_pred EEEecccEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHH----cCCCcccEEEEeCCChhHH
Confidence 889999999999998 685 5679999999999999999999999999999999987 7 99999999996 66778
Q ss_pred hhhcCCCCccEEEeecCHHHHHHHHhhc---CCCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEE
Q 005041 476 DLLKLDDVIDLVIPRGSNKLVSQIKEST---KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLV 551 (717)
Q Consensus 476 ~~l~~~~~v~~v~fTGs~~~g~~i~~~a---~~p~~lElGGk~p~iV~~dADl~~A~~~i~~~~~~n~g-~C~a~~rv~V 551 (717)
+.|..||+||+|+||||+++|+.|++.+ .||+++|||||||+||++|||+|.|++.+++|+|.|+| .|+|++|+||
T Consensus 143 ~~l~~~~~v~~V~ftGs~~~g~~v~~~aa~~~~~~~lElgGk~p~iV~~dADld~aa~~iv~~~f~~~GQ~C~a~~rv~V 222 (409)
T PRK10090 143 QELAGNPKVAMVSMTGSVSAGEKIMAAAAKNITKVCLELGGKAPAIVMDDADLDLAVKAIVDSRVINSGQVCNCAERVYV 222 (409)
T ss_pred HHHhcCCCcCEEEEECCHHHHHHHHHHHHhcCCeEEEECCCCCeEEEcCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEE
Confidence 8889999999999999999999998876 38999999999999999999999999999999999987 9999999999
Q ss_pred cCcccChhhHHHHHHHHHHcCc-----------------------------------eE-ecCccc--cc-cc-c-C---
Q 005041 552 HKDLACNGALNELVVELQHEGV-----------------------------------GL-FGGPRA--SK-LL-Q-I--- 587 (717)
Q Consensus 552 ~~~i~d~~f~~~l~~~~~~~~~-----------------------------------~~-~g~~~~--~~-~~-p-i--- 587 (717)
|+++| |+|+++|+++++++.. ++ .|+.+. .+ |+ | |
T Consensus 223 ~~~i~-~~f~~~l~~~~~~~~~G~p~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~ 301 (409)
T PRK10090 223 QKGIY-DQFVNRLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVALGGKAVEGKGYYYPPTLLLD 301 (409)
T ss_pred cHHHH-HHHHHHHHHHHHhcCCCCCCCcccCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEecEEEeC
Confidence 99999 8999999999987631 01 122221 12 33 5 2
Q ss_pred --CCCccccccccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEecCHHHHHHHHhcCCeeeEEEcCCCCCCCCCccCCc
Q 005041 588 --PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLG 665 (717)
Q Consensus 588 --~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfG~g 665 (717)
++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.++++++++|+|+||+........||||.
T Consensus 302 v~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~ 381 (409)
T PRK10090 302 VRQEMSIMHEETFGPVLPVVAFDTLEEAIAMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINRENFEAMQGFHAGW 381 (409)
T ss_pred CCCCCHHHhCCCCCceEEEEEECCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCc
Confidence 358999999999999999999999999999999999999999999999999999999999999998766666799999
Q ss_pred cccccccCcccccccchhhcccEEEEEEecC
Q 005041 666 AEVGISTSRIHARGPVGVEGLLTTRWILRGN 696 (717)
Q Consensus 666 ~~~G~~~~~~~~~g~~g~~~ft~~k~v~~~~ 696 (717)
++||+| +++|.+|+++||+.|++++++
T Consensus 382 k~SG~G----~~~g~~gl~~f~~~k~v~~~~ 408 (409)
T PRK10090 382 RKSGIG----GADGKHGLHEYLQTQVVYLQS 408 (409)
T ss_pred ccccCC----ccchHHHHHHhcceEEEEEec
Confidence 999986 356999999999999997753
No 112
>cd07087 ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins. ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate.
Probab=100.00 E-value=8.3e-68 Score=588.57 Aligned_cols=376 Identities=22% Similarity=0.246 Sum_probs=309.5
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhhchhHHHHHHhhcChhHHHHHHHHHHHH
Q 005041 297 EMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRIL 376 (717)
Q Consensus 297 ~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~g~~~a~~~~~~~~~~~i~~~~~~~~~~ 376 (717)
+++++|++||+.|+++|..+|.++|++++++|++|+++|+++++.|+|++.. ++.. .|+...++.++++
T Consensus 2 ~~v~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~----~~~~-------~Ev~~~~~~~~~~ 70 (426)
T cd07087 2 ELVARLRETFLTGKTRSLEWRKAQLKALKRMLTENEEEIAAALYADLGKPPA----EAYL-------TEIAVVLGEIDHA 70 (426)
T ss_pred hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHH----HHHH-------HHHHHHHHHHHHH
Confidence 3889999999999999999999999999999999999999999888766521 2211 2344444444444
Q ss_pred hccccc-cccc-ccccccCCCceEEEeecceeEEEEEcCC-Cch-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHH
Q 005041 377 ADMEEP-IGQI-LKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVI 452 (717)
Q Consensus 377 ~~~~~~-~~~~-~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~~~ 452 (717)
+...+. .+.. ........+...+.+++|+|||++|+|| +|. +.+++++|||++||+||+|||+.+|+++.++++++
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlKps~~~p~~~~~l~~~~ 150 (426)
T cd07087 71 LKHLKKWMKPRRVSVPLLLQPAKAYVIPEPLGVVLIIGPWNYPLQLALAPLIGAIAAGNTVVLKPSELAPATSALLAKLI 150 (426)
T ss_pred HHHHHHHhCCcccCCccccCCCceEEEEecCcEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHH
Confidence 322111 1110 0000001123457789999999999998 686 67899999999999999999999999999999999
Q ss_pred HHhcccccCcCceEEecCCChhhhhhcCCCCccEEEeecCHHHHHHHHhhc---CCCEEEecCCcceEEEcCCCCHHHHH
Q 005041 453 TSAIPDTVGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST---KIPVLGHADGICHVYVDKSANLDVAK 529 (717)
Q Consensus 453 ~~al~~alP~gvv~vv~~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a---~~p~~lElGGk~p~iV~~dADl~~A~ 529 (717)
.+ .+|+|++|+|+|..+.+..|..|| +|+|+||||+++|+.|++.+ .||+++|+|||||+||++|||+|.|+
T Consensus 151 ~~----~~P~gv~~vv~g~~~~~~~l~~~~-v~~V~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~~~iV~~dadl~~aa 225 (426)
T cd07087 151 PK----YFDPEAVAVVEGGVEVATALLAEP-FDHIFFTGSPAVGKIVMEAAAKHLTPVTLELGGKSPCIVDKDANLEVAA 225 (426)
T ss_pred HH----hCCCCEEEEEeCCchHHHHHHhCC-CCEEEEeCChHHHHHHHHHHHhhCCceEEeccCCCceEecCCCCHHHHH
Confidence 86 599999999996445567777788 99999999999999998877 48999999999999999999999999
Q ss_pred HHHHhhccCCCc-cccccceEEEcCcccChhhHHHHHHHHHHcCce-----------------------------EecCc
Q 005041 530 NIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGVG-----------------------------LFGGP 579 (717)
Q Consensus 530 ~~i~~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~~-----------------------------~~g~~ 579 (717)
+.+++++|.|+| .|+|++|||||+++| |+|+++|+++++++... ++|+.
T Consensus 226 ~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~L~~~~~~l~~~~~~~~~~~gpli~~~~~~~~~~~i~~a~v~~gg~ 304 (426)
T cd07087 226 RRIAWGKFLNAGQTCIAPDYVLVHESIK-DELIEELKKAIKEFYGEDPKESPDYGRIINERHFDRLASLLDDGKVVIGGQ 304 (426)
T ss_pred HHHHHHHHhccCCccccCCEEEEcHHHH-HHHHHHHHHHHHHHcCCCCccCCCcCCCCCHHHHHHHHHHHhcceEEeCCc
Confidence 999999999987 999999999999999 89999999998875210 11222
Q ss_pred cc-cc-cc-c-C-----CCCccccccccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEecCHHHHHHHHhcCCeeeEEE
Q 005041 580 RA-SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFH 650 (717)
Q Consensus 580 ~~-~~-~~-p-i-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~v~i 650 (717)
.. .+ ++ | | ++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.++++++++|+|+|
T Consensus 305 ~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~i 384 (426)
T cd07087 305 VDKEERYIAPTILDDVSPDSPLMQEEIFGPILPILTYDDLDEAIEFINSRPKPLALYLFSEDKAVQERVLAETSSGGVCV 384 (426)
T ss_pred cCCCCCEEeeEEEecCCCCCHHHhcccccceEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHhcCCcccEEE
Confidence 11 12 33 5 2 358899999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCC--CCCCccCCccccccccCcccccccchhhcccEEEEEE
Q 005041 651 NASTRF--CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 693 (717)
Q Consensus 651 N~~~~~--~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v~ 693 (717)
|++... .+..||||.+.||+| +++|.+|+++||+.|++.
T Consensus 385 N~~~~~~~~~~~PfGG~k~SG~G----~~~g~~~l~~~~~~k~~~ 425 (426)
T cd07087 385 NDVLLHAAIPNLPFGGVGNSGMG----AYHGKAGFDTFSHLKSVL 425 (426)
T ss_pred CCcccccCCCCCCCCCCCcccCC----CccCHHHHHHhccceeec
Confidence 987532 367899999999986 356899999999999874
No 113
>TIGR02518 EutH_ACDH acetaldehyde dehydrogenase (acetylating).
Probab=100.00 E-value=2.1e-67 Score=590.19 Aligned_cols=384 Identities=18% Similarity=0.253 Sum_probs=313.4
Q ss_pred HhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhhchhHHHHHHhhcChhHHHHHHH
Q 005041 292 QVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAK 371 (717)
Q Consensus 292 ~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~g~~~a~~~~~~~~~~~i~~~~~ 371 (717)
.+|+++++++|++||+.|+++|.++|.++|++++++|++|+++|++...+|.|++.. + +++. +......
T Consensus 7 ~~~v~~av~~A~~A~~~w~~~s~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~----~---~~~~----~~~~~~~ 75 (488)
T TIGR02518 7 IQQVRNLIRSAKVAQKKLANMTQEQIDKIVKAIVDAAYENAVKLAKMANEETGFGKW----E---DKVI----KNVFAAT 75 (488)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCChH----H---HHHH----HHHHHHH
Confidence 689999999999999999999999999999999999999999999987766654421 1 1110 1112333
Q ss_pred HHHHHhcccccccccccccccCCCceEEEeecceeEEEEEcCC-Cchh-HHHHHHHHHHhCCEEEEeCCcchHHHHHHHH
Q 005041 372 SIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPDA-LVQIASLAIRSGNGLLLKGGKEAMRSNAILH 449 (717)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~~-~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~ 449 (717)
.+.+++...+..|.... +.+...+.+++|+|||++|+|| ||.. ..+++++||++||+||+|||+.||+|+..++
T Consensus 76 ~~~~~~~~~~~~G~~~~----~~~~~~~~~~~PlGVV~~I~P~n~P~~~~~~k~~~AL~aGNaVIlKps~~a~~s~~~~~ 151 (488)
T TIGR02518 76 IVYDSIKDMKTIGILSE----DKEKKVIEIAVPVGVVAGLIPSTNPTSTAIYKTLISIKARNAIVFSPHPNAKKCIIETV 151 (488)
T ss_pred HHHHHHhhCcccceecC----CCCcceEEEEecceEEEEEcccCChHHHHHHHHHHHHHcCCcEEEECCccchHHHHHHH
Confidence 34444332233342111 2344567889999999999998 7964 5689999999999999999999999999999
Q ss_pred HHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHhhcCCCEEEecCCcceEEEcCCCCHHH
Q 005041 450 KVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDV 527 (717)
Q Consensus 450 ~~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a~~p~~lElGGk~p~iV~~dADl~~ 527 (717)
++++++++++ +|+|+||+|++ +.+.++.|..||+||+|+||||+++++.+ +.+.+|+++|+|||+|+||++|||+|+
T Consensus 152 ~~l~~~l~eaGlP~gvv~~v~g~~~e~~~~L~~~~~vd~V~fTGs~~v~~~a-~~~~~pv~~e~gGn~p~iV~~dADld~ 230 (488)
T TIGR02518 152 KLMRKAAEEAGAPEGAIGCITVPTIEGTNELMKNKDTSLILATGGEAMVKAA-YSSGTPAIGVGPGNGPAYIERTANVKK 230 (488)
T ss_pred HHHHHHHHHcCcCcccEEEEcCCCHHHHHHHHhCCCcCEEEEeCCHHHHHHH-HHcCCCEEEEcCCCCeEEEeCCCCHHH
Confidence 9999999899 99999999995 55667777789999999999999999988 556899999999999999999999999
Q ss_pred HHHHHHhhccCCCc-cccccceEEEcCcccChhhHHHHHHH-------HHHcCceE--e-c----Ccccc--------cc
Q 005041 528 AKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVE-------LQHEGVGL--F-G----GPRAS--------KL 584 (717)
Q Consensus 528 A~~~i~~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~-------~~~~~~~~--~-g----~~~~~--------~~ 584 (717)
|++.+++|+|+|+| +|+|.+|+|||++|| |+|+++|+++ .+++.+.- . . ++... .+
T Consensus 231 Aa~~iv~sk~~~~Gq~C~a~~rllV~~~i~-d~f~~~L~~~g~~~~~~~~~~~vg~~~~~~~~~~gp~i~~~~~~~i~~~ 309 (488)
T TIGR02518 231 AVRDIIDSKTFDNGTICASEQSIIVEECNK-DAVVEELKKQGGYFLTAEEAEKLGKFILRPNGTMNPQIVGKSPQVIANL 309 (488)
T ss_pred HHHHHHHHHhcCCCCCCCCCCEEEEeHHHH-HHHHHHHHHhhhhhcCHHHHHhhcccccCCCCCcCcccccchHHHHHHH
Confidence 99999999999876 999999999999999 7999999887 55543210 0 0 00000 00
Q ss_pred c----c------------C-CCCccccccccCceEEEEEeCCHHHHHHHHHh----cCCCceeEEEecCHHHHHHHHhcC
Q 005041 585 L----Q------------I-PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQ----HGSAHTDCIVAEDQKVAETFLCQV 643 (717)
Q Consensus 585 ~----p------------i-~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~----~~~GL~a~I~t~d~~~a~~~~~~l 643 (717)
+ + + ++++ ++||+||||++|++|+|+||||+++|+ ++|||+++|||+|.+++++|++++
T Consensus 310 i~~av~~gakll~gg~~~v~~~~~-~~~E~fgPVl~v~~~~~~dEAI~~an~~i~~~~~Glta~I~T~d~~~a~~f~~~i 388 (488)
T TIGR02518 310 AGLTVPEDAKVLIGEQNGVGNKNP-YSREKLTTILAFYTEENWHEACELSIELLQNEGAGHTLIIHSENKDIVREFALKK 388 (488)
T ss_pred hccccCCCCEEEEeCCCCCCCCCc-cccCccCceEEEEEeCCHHHHHHHHHHhhhcCCCCCeEEEEeCCHHHHHHHHHhC
Confidence 0 1 1 1244 589999999999999999999999998 699999999999999999999999
Q ss_pred CeeeEEEcCC---------CCCCCCCccCCccccccccCcccccccchhhcccEEEEEEecCce
Q 005041 644 DSAAVFHNAS---------TRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGH 698 (717)
Q Consensus 644 ~~G~v~iN~~---------~~~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v~~~~~~ 698 (717)
++|+|+||.+ +.+.+++.||+|.+.|+|++ .+.|+++|++.|+|.++..+
T Consensus 389 ~ag~V~VN~~~~~~~~Ga~t~~~~~~~~G~G~~~g~st~-----~~v~~~~l~~~k~v~~~~~~ 447 (488)
T TIGR02518 389 PVSRMLVNTGGSLGGIGATTNLVPAFTLGCGAVGGSSTS-----DNITPENLINIRRVAYGVRE 447 (488)
T ss_pred CeeEEEEcCCCcccccccccCCCccccccccccCCCcCC-----CCCCHHHhheeeEEEecccc
Confidence 9999999953 34567777899999888864 38999999999999998744
No 114
>cd07134 ALDH_AlkH-like Pseudomonas putida Aldehyde dehydrogenase AlkH-like. Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD.
Probab=100.00 E-value=1e-67 Score=588.23 Aligned_cols=378 Identities=19% Similarity=0.215 Sum_probs=309.5
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhhchhHHHHHHhhcChhHHHHHHHHHHHH
Q 005041 297 EMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRIL 376 (717)
Q Consensus 297 ~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~g~~~a~~~~~~~~~~~i~~~~~~~~~~ 376 (717)
+++++|++||+.|+++|..+|.++|++++++|++|++||++++++|+|++.. ++...++.....++++++..++.+
T Consensus 2 ~~~~~a~~a~~~W~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~----ea~~~ev~~~~~~~~~~~~~~~~~ 77 (433)
T cd07134 2 RVFAAQQAHALALRASTAAERIAKLKRLKKAILARREEIIAALAADFRKPAA----EVDLTEILPVLSEINHAIKHLKKW 77 (433)
T ss_pred hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHH----HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4788999999999999999999999999999999999999999988876532 221112222223333333333322
Q ss_pred hcccccccccccccccCCCceEEEeecceeEEEEEcCC-Cch-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHH
Q 005041 377 ADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITS 454 (717)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~~~~~ 454 (717)
... ...+......+...+++|+|+|||++|+|| +|. +.+++++|||++||+||+|||+.+|+++.++++++++
T Consensus 78 ~~~-----~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~~~~~~~ 152 (433)
T cd07134 78 MKP-----KRVRTPLLLFGTKSKIRYEPKGVCLIISPWNYPFNLAFGPLVSAIAAGNTAILKPSELTPHTSAVIAKIIRE 152 (433)
T ss_pred hCC-----cccCCccccCCCceEEEEecCCEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHH
Confidence 211 111100001233467899999999999998 686 5679999999999999999999999999999999986
Q ss_pred hcccccCcCceEEecCCChhhhhhcCCCCccEEEeecCHHHHHHHHhhcC---CCEEEecCCcceEEEcCCCCHHHHHHH
Q 005041 455 AIPDTVGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK---IPVLGHADGICHVYVDKSANLDVAKNI 531 (717)
Q Consensus 455 al~~alP~gvv~vv~~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a~---~p~~lElGGk~p~iV~~dADl~~A~~~ 531 (717)
++|+|++|+|++..+.+..|.+|| +++|+||||+.+|+.|++.+. +|+++|||||||+||++|||++.|++.
T Consensus 153 ----a~p~g~v~~v~g~~~~~~~l~~~~-v~~v~ftGs~~~g~~i~~~aa~~~~~~~lelgG~~~~iV~~dAD~~~aa~~ 227 (433)
T cd07134 153 ----AFDEDEVAVFEGDAEVAQALLELP-FDHIFFTGSPAVGKIVMAAAAKHLASVTLELGGKSPTIVDETADLKKAAKK 227 (433)
T ss_pred ----hCCcCEEEEEeCChhHHHHHHhCC-CCEEEEECChHHHHHHHHHHHhcCCcEEEEccCCCcEEECCCCCHHHHHHH
Confidence 599999999997555677777787 999999999999999998763 899999999999999999999999999
Q ss_pred HHhhccCCCc-cccccceEEEcCcccChhhHHHHHHHHHHcCc-----------------------------------eE
Q 005041 532 VIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV-----------------------------------GL 575 (717)
Q Consensus 532 i~~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~-----------------------------------~~ 575 (717)
+++++|.|+| .|++++|+|||+++| |+|+++|+++++++.. ++
T Consensus 228 i~~~~~~~~GQ~C~a~~rv~V~~~v~-d~f~~~L~~~~~~~~~~~~~~~~~~~~gpli~~~~~~~i~~~i~~a~~~ga~~ 306 (433)
T cd07134 228 IAWGKFLNAGQTCIAPDYVFVHESVK-DAFVEHLKAEIEKFYGKDAARKASPDLARIVNDRHFDRLKGLLDDAVAKGAKV 306 (433)
T ss_pred HHHHhhcCcCCcccCCcEEEECHHHH-HHHHHHHHHHHHHHcCCCCCcCCCCccCCcCCHHHHHHHHHHHHHHHhCCCEE
Confidence 9999999987 999999999999999 8999999998886411 00
Q ss_pred -ecCccc-cc-cc-c-C-----CCCccccccccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEecCHHHHHHHHhcCCe
Q 005041 576 -FGGPRA-SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDS 645 (717)
Q Consensus 576 -~g~~~~-~~-~~-p-i-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~ 645 (717)
.|+... .+ |+ | | ++|.+++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.++++++++
T Consensus 307 ~~gg~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~ 386 (433)
T cd07134 307 EFGGQFDAAQRYIAPTVLTNVTPDMKIMQEEIFGPVLPIITYEDLDEVIEYINAKPKPLALYVFSKDKANVNKVLARTSS 386 (433)
T ss_pred EeCCCcCCCCCEEeeEEEeCCCCccHHHhccccCceEEEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCc
Confidence 122111 12 23 5 2 3588999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEEcCCCCC--CCCCccCCccccccccCcccccccchhhcccEEEEEE
Q 005041 646 AAVFHNASTRF--CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 693 (717)
Q Consensus 646 G~v~iN~~~~~--~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v~ 693 (717)
|.|+||+++.. .+..||||.+.||+| +++|++|+++||+.|++.
T Consensus 387 g~v~iN~~~~~~~~~~~PfGG~k~SG~G----~~~g~~~l~~~~~~k~i~ 432 (433)
T cd07134 387 GGVVVNDVVLHFLNPNLPFGGVNNSGIG----SYHGVYGFKAFSHERAVL 432 (433)
T ss_pred ceEEECCcccccCCCCCCCCCcCcccCC----CcCcHHHHHHhcccceee
Confidence 99999987643 356899999999986 246899999999999875
No 115
>PRK11563 bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=6.1e-68 Score=617.42 Aligned_cols=396 Identities=18% Similarity=0.207 Sum_probs=323.0
Q ss_pred HHHHhcCCcceEEEecCCcccccHhhHHHHHHHHHHH-HHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
Q 005041 269 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARES-SRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQ 347 (717)
Q Consensus 269 l~~~~tg~~iGT~i~a~~~~~~~~~~v~~av~~A~~A-~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~ 347 (717)
..+|.+++.++++..++ +|+++|+++|++| |+.|+++|..+|+++|++++++|++|.++|++ ++.|+||+.
T Consensus 23 ~~nP~tg~~i~~~~~~~-------~dv~~Av~~A~~A~~~~W~~~~~~eR~~~L~~~a~~l~~~~~ela~-l~~e~GK~~ 94 (675)
T PRK11563 23 LHDAVTGEPVARVSSEG-------LDFAAALAYAREVGGPALRALTFHERAAMLKALAKYLLERKEELYA-LSAQTGATR 94 (675)
T ss_pred ccCCCCCCEEEEEcCCc-------HHHHHHHHHHHHhhhhhhhcCCHHHHHHHHHHHHHHHHHhHHHHHH-HHHHhCCCH
Confidence 36788999999987655 5899999999998 79999999999999999999999999999998 466665442
Q ss_pred hhchhHHHHHHhhcChhHHHHHHHHHHHHhccccc---------ccccccccccCCCceEEEeecce-eEEEEEcCC-Cc
Q 005041 348 EAGYAKSLVSRLALKPGKISSLAKSIRILADMEEP---------IGQILKRTELADGLILEKTSCPL-GVLLIVFES-RP 416 (717)
Q Consensus 348 ~~g~~~a~~~~~~~~~~~i~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~Pl-GVV~~I~p~-~P 416 (717)
.++ ..|+...++.+++++...+. .|+..+.. .+.....+..++|+ |||++|+|| ||
T Consensus 95 ----~~a--------~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~p~~GVv~~I~PwNfP 161 (675)
T PRK11563 95 ----RDS--------WIDIEGGIGTLFTYASKGRRELPNDTVLVEGEVEPLS-KGGTFAGRHILTPLEGVAVHINAFNFP 161 (675)
T ss_pred ----HHH--------HHHHHHHHHHHHHHHHHHhhhccccccccCCcccccc-CCCcccceEEEeecCceEEEECCCchH
Confidence 122 23566677777777654321 12222110 01112246788997 999999998 68
Q ss_pred h-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecCCChhhhhhcCCCCccEEEeecCHH
Q 005041 417 D-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNK 494 (717)
Q Consensus 417 ~-~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~v~~v~fTGs~~ 494 (717)
. +.+++++|||++||+||+||||.||+++.++++++.++ . +|+|++|+|+|. .++++..++++++|+||||++
T Consensus 162 ~~~~~~~i~pALaaGN~VV~KPse~tp~~a~~l~~~~~ea---G~~P~gv~~vv~g~--~~~~~~~~~~i~~v~FTGS~~ 236 (675)
T PRK11563 162 VWGMLEKLAPAFLAGVPAIVKPATATAYLTEAVVRLIVES---GLLPEGALQLICGS--AGDLLDHLDGQDVVTFTGSAA 236 (675)
T ss_pred HHHHHHHHHHHHHcCCeEEEECCCCCcHHHHHHHHHHHHc---CCCCCCcEEEeeCC--HHHHhhcCCCCCEEEEECcHH
Confidence 5 56799999999999999999999999999999999873 4 899999999963 233455456899999999999
Q ss_pred HHHHHHhhc-----CCCEEEecCCcceEEEcCCCC-----HHHHHHHHHhhccCCCc-cccccceEEEcCcccChhhHHH
Q 005041 495 LVSQIKEST-----KIPVLGHADGICHVYVDKSAN-----LDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNE 563 (717)
Q Consensus 495 ~g~~i~~~a-----~~p~~lElGGk~p~iV~~dAD-----l~~A~~~i~~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~ 563 (717)
+|+.|++.+ .+|+++|||||||+||++||| +|.|++.+++|+|.|+| +|+|++|+|||++|| |+|+++
T Consensus 237 ~G~~i~~~~~a~~~~~~~~lELGGknp~IV~~DAd~~~~dld~aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~-d~f~~~ 315 (675)
T PRK11563 237 TAQKLRAHPNVVANSVPFTAEADSLNAAILGPDATPGTPEFDLFVKEVVREMTVKAGQKCTAIRRAIVPRALV-DAVIEA 315 (675)
T ss_pred HHHHHHhhhhhhhCCceEEEecCCcCceEECCCCCcCchhHHHHHHHHHHHHHHhCCCccccceeEEeeHHHH-HHHHHH
Confidence 999998742 499999999999999999995 99999999999999987 999999999999999 899999
Q ss_pred HHHHHHHcCc---------------------------------eE-ecCcc---------ccccc--c-C-----C--CC
Q 005041 564 LVVELQHEGV---------------------------------GL-FGGPR---------ASKLL--Q-I-----P--ET 590 (717)
Q Consensus 564 l~~~~~~~~~---------------------------------~~-~g~~~---------~~~~~--p-i-----~--~~ 590 (717)
|+++++++.+ ++ +|+.. ..++| | | + .+
T Consensus 316 l~~~~~~l~vG~p~d~~t~~GPli~~~~~~~i~~~i~~a~~~a~vl~Gg~~~~~~~~~~~~~g~f~~PTvl~~v~~~~~~ 395 (675)
T PRK11563 316 LRARLAKVVVGDPRLEGVRMGALASLEQREDVREKVAALLAAAEIVFGGPDSFEVVGADAEKGAFFPPTLLYCDDPLEAP 395 (675)
T ss_pred HHHHHhcCccCCCCCCCCcccCCcCHHHHHHHHHHHHHHHhCCEEEECCcccccccCCCCCCCeeECCEEEeccCchhhh
Confidence 9999987632 11 34421 12433 6 3 3 25
Q ss_pred ccccccccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEecCHHHHHHHHhcCC--eeeEEEcCCCC--------C-CCC
Q 005041 591 RLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVD--SAAVFHNASTR--------F-CDG 659 (717)
Q Consensus 591 ~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~--~G~v~iN~~~~--------~-~~~ 659 (717)
++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.+++++++ +|.||||+.+. . .+.
T Consensus 396 ~i~~eEiFGPVl~V~~~~~~~eai~~aN~s~~gL~asvft~d~~~a~~~~~~l~~~~G~v~iN~~~~~~~~~~~~~~~~~ 475 (675)
T PRK11563 396 AVHDVEAFGPVSTLMPYDDLDEAIELAARGKGSLVASLVTADPEVARELVLGAAPWHGRLLVLNRESAKESTGHGSPLPQ 475 (675)
T ss_pred hHhhccccCCceEEEecCCHHHHHHHHhcCCCCceEEEEeCCHHHHHHHHHHHHhcCCEEEEcCccccccccCCCCCCcC
Confidence 789999999999999999999999999999999999999999999999999997 99999997521 1 256
Q ss_pred CccCCccccccccCcccc-cccchhhcccEEEEEEec
Q 005041 660 ARFGLGAEVGISTSRIHA-RGPVGVEGLLTTRWILRG 695 (717)
Q Consensus 660 ~pfG~g~~~G~~~~~~~~-~g~~g~~~ft~~k~v~~~ 695 (717)
+||||.|.||+|+ + +|.+|+++|++.|+|..-
T Consensus 476 ~pfGG~k~SG~G~----~~~g~~~~~~f~~~k~~~~~ 508 (675)
T PRK11563 476 LVHGGPGRAGGGE----ELGGLRGVKHYMQRTAVQGS 508 (675)
T ss_pred CCcCCCCCCCCCc----cccchhHHHHhheeeeeecC
Confidence 7999999999863 3 368999999999998653
No 116
>cd07077 ALDH-like NAD(P)+-dependent aldehyde dehydrogenase-like (ALDH-like) family. The aldehyde dehydrogenase-like (ALDH-like) group of the ALDH superfamily of NAD(P)+-dependent enzymes which, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. This group includes families ALDH18, ALDH19, and ALDH20 and represents such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group.
Probab=100.00 E-value=1.9e-66 Score=572.87 Aligned_cols=382 Identities=21% Similarity=0.250 Sum_probs=320.5
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhhchhHHHHHHhhcChhHHHHHHHHHHHHhcc
Q 005041 300 VAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRILADM 379 (717)
Q Consensus 300 ~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~g~~~a~~~~~~~~~~~i~~~~~~~~~~~~~ 379 (717)
++|++||+.|+++|.++|.++|++++++|++|+++|++++++|++++... ..+.+..++.....++..+++.+++++..
T Consensus 1 ~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~-~~~~~~~~~~~~~~ev~~~~~~~~~~a~~ 79 (397)
T cd07077 1 ESAKNAQRTLAVNHDEQRDLIINAIANALYDTRQRLASEAVSERGAYIRS-LIANWIAMMGCSESKLYKNIDTERGITAS 79 (397)
T ss_pred ChHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-ccHHHHHHhCCcHHHHHHHHHHHHHHHHh
Confidence 36899999999999999999999999999999999999999999887532 22334445555667899999999998754
Q ss_pred cccc-cccccccccCCCceEEEeecceeEEEEEcCC-CchhHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcc
Q 005041 380 EEPI-GQILKRTELADGLILEKTSCPLGVLLIVFES-RPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIP 457 (717)
Q Consensus 380 ~~~~-~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~~~~~al~ 457 (717)
.... +...+ .+...+++++|+|||++|+|| ||...++++++||++||+||+|||+.+|+|+.++++++.+++.
T Consensus 80 ~~~~~~~~~~-----~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~aL~aGN~vilKps~~~p~~~~~l~~~~~~~~~ 154 (397)
T cd07077 80 VGHIQDVLLP-----DNGETYVRAFPIGVTMHILPSTNPLSGITSALRGIATRNQCIFRPHPSAPFTNRALALLFQAADA 154 (397)
T ss_pred cCcccceEec-----CCCceEEEEecceEEEEEeCCCCchHHHHHHHHHHHcCCcEEEEcCcchhhHHHHHHHHHHHHhh
Confidence 3322 22111 123467899999999999998 5756779999999999999999999999999999999998764
Q ss_pred cccCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHhhcC-CCEEEecCCcceEEEcCCCCHHHHHHHHHhh
Q 005041 458 DTVGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK-IPVLGHADGICHVYVDKSANLDVAKNIVIDA 535 (717)
Q Consensus 458 ~alP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a~-~p~~lElGGk~p~iV~~dADl~~A~~~i~~~ 535 (717)
..+|++++|+|++ +.+.+..|..||+||+|+||||+++|+.+++.+. +|+++|+|||+|+||++|||+|.|++.++++
T Consensus 155 ~g~p~~~v~~v~~~~~~~~~~l~~~~~vd~v~ftGs~~~~~~v~~~~~~~~~~~~~gg~~~~iv~~dad~~~a~~~~~~~ 234 (397)
T cd07077 155 AHGPKILVLYVPHPSDELAEELLSHPKIDLIVATGGRDAVDAAVKHSPHIPVIGFGAGNSPVVVDETADEERASGSVHDS 234 (397)
T ss_pred cCCCCceEEEecCCCHHHHHHHHcCCCCCEEEecCCHHHHHHHHHcCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHh
Confidence 3399999999985 5567777888999999999999999999988774 9999999999999999999999999999999
Q ss_pred ccCCCccccccceEEEcCcccChhhHHHHHHHHHHcCceEecCccccccc-cCCCCccccccccCceEEEEEeCCHH---
Q 005041 536 KIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLL-QIPETRLFHHEYNSMVCTVEIVDDVR--- 611 (717)
Q Consensus 536 ~~~n~g~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~~~~g~~~~~~~~-pi~~~~~~~eE~FGPVl~v~~~~~~d--- 611 (717)
+|.|+|.|+|++|+|||+++| |+|+++|+++++..|.++..+... .++ |.++|++++||+||||++|++|+|+|
T Consensus 235 ~~~~GQ~C~a~~~v~V~~~i~-d~~~~~l~~~~~~~G~~~~~g~~~-~~~~pt~~~~~~~~E~FgPvl~v~~~~~~~eai 312 (397)
T cd07077 235 KFFDQNACASEQNLYVVDDVL-DPLYEEFKLKLVVEGLKVPQETKP-LSKETTPSFDDEALESMTPLECQFRVLDVISAV 312 (397)
T ss_pred hccCCccCCCCeEEEEehhhh-HHHHHHHHHHHHhcCcCcCCCcee-eEEeccCCCChhhhhhhCceeEEEEEcchHHHH
Confidence 999944999999999999999 899999999998866655422111 122 23468899999999999999999996
Q ss_pred -HHHHHHHhcCCCceeEEEecCHHHHHHHHhcCCeeeEEEcCCCCCCCCC--ccCCcc--ccccccCcccccc-cchhhc
Q 005041 612 -AAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGA--RFGLGA--EVGISTSRIHARG-PVGVEG 685 (717)
Q Consensus 612 -eAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~--pfG~g~--~~G~~~~~~~~~g-~~g~~~ 685 (717)
+|++++|+++|||++||||+|.+++.++++++++|+|+||+++....+. |||+.+ .||++ +++| .+|+++
T Consensus 313 ~~ai~~~n~~~~gl~~~Ift~d~~~~~~~~~~l~~G~v~vN~~~~~~~~~~~~~gg~~~~~SG~g----~~~g~~~~~~~ 388 (397)
T cd07077 313 ENAWMIIESGGGPHTRCVYTHKINKVDDFVQYIDTASFYPNESSKKGRGAFAGKGVERIVTSGMN----NIFGAGVGHDA 388 (397)
T ss_pred HHHHHHHHhcCCCCceEEEeCCHHHHHHHHHhCCEEEEEEeCCccCCCccccCCCcceEEEcccc----CCCCCCCChHH
Confidence 5666789999999999999999999999999999999999987665334 454444 66664 4568 999999
Q ss_pred ccEEEEEE
Q 005041 686 LLTTRWIL 693 (717)
Q Consensus 686 ft~~k~v~ 693 (717)
|++.|+++
T Consensus 389 ~~~~k~v~ 396 (397)
T cd07077 389 LRPLKRLV 396 (397)
T ss_pred hcceeEee
Confidence 99999986
No 117
>cd07129 ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydrogenase. Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids.
Probab=100.00 E-value=9e-67 Score=583.99 Aligned_cols=380 Identities=16% Similarity=0.169 Sum_probs=312.3
Q ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhhchhHHHHHHhhcChhHHHHHHHHHH
Q 005041 295 AREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIR 374 (717)
Q Consensus 295 v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~g~~~a~~~~~~~~~~~i~~~~~~~~ 374 (717)
+++|+++|++||+.|+++|.++|.++|++++++|++++++|++++++|+|++.. ++ ..|+..+++.++
T Consensus 1 v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gkp~~----~~--------~~ev~~~~~~l~ 68 (454)
T cd07129 1 VDAAAAAAAAAFESYRALSPARRAAFLEAIADEIEALGDELVARAHAETGLPEA----RL--------QGELGRTTGQLR 68 (454)
T ss_pred ChHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChH----HH--------HHHHHHHHHHHH
Confidence 468999999999999999999999999999999999999999998877655432 11 134555666666
Q ss_pred HHhcccc---ccccccccc----ccCCCceEEEeecceeEEEEEcCC-Cchh---HHHHHHHHHHhCCEEEEeCCcchHH
Q 005041 375 ILADMEE---PIGQILKRT----ELADGLILEKTSCPLGVLLIVFES-RPDA---LVQIASLAIRSGNGLLLKGGKEAMR 443 (717)
Q Consensus 375 ~~~~~~~---~~~~~~~~~----~~~~~~~~~~~~~PlGVV~~I~p~-~P~~---~~~~~~~ALaaGN~vVlKps~~tp~ 443 (717)
+++...+ ..+...... ....+...+++++|+|||++|+|| ||.. .++++++||++||+||+|||+.+|+
T Consensus 69 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~a~ALaaGN~VVlKps~~~p~ 148 (454)
T cd07129 69 LFADLVREGSWLDARIDPADPDRQPLPRPDLRRMLVPLGPVAVFGASNFPLAFSVAGGDTASALAAGCPVVVKAHPAHPG 148 (454)
T ss_pred HHHHHHHhcCCccccccccccccCCCCCccceEEeeccceEEEECCCCCchhhhhhhhhHHHHHHcCCeEEEEcCCCCch
Confidence 6554322 112111100 001122346789999999999998 6853 3489999999999999999999999
Q ss_pred HHHHHHHHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHhhc-----CCCEEEecCCcce
Q 005041 444 SNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST-----KIPVLGHADGICH 516 (717)
Q Consensus 444 t~~~l~~~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a-----~~p~~lElGGk~p 516 (717)
|+.++++++.+++.++ +|+|+||+|+| +.++++.|..||+|++|+||||+.+|+.|++.+ .||+++|||||||
T Consensus 149 t~~~l~~~~~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~aa~~~~~~p~~lElGG~n~ 228 (454)
T cd07129 149 TSELVARAIRAALRATGLPAGVFSLLQGGGREVGVALVKHPAIKAVGFTGSRRGGRALFDAAAARPEPIPFYAELGSVNP 228 (454)
T ss_pred HHHHHHHHHHHHHHHhCCChhheEEeeCCcHHHHHHHhcCCCccEEEEeCChHHHHHHHHHhhccCccceeEeecCCcCc
Confidence 9999999999888889 99999999996 446778888899999999999999999998765 3799999999999
Q ss_pred EEEcCCC---CHHHHHHHHHhhccCCCc-cccccceEEEcCc-ccChhhHHHHHHHHHHcCc------------------
Q 005041 517 VYVDKSA---NLDVAKNIVIDAKIDYPA-ACNAMETLLVHKD-LACNGALNELVVELQHEGV------------------ 573 (717)
Q Consensus 517 ~iV~~dA---Dl~~A~~~i~~~~~~n~g-~C~a~~rv~V~~~-i~d~~f~~~l~~~~~~~~~------------------ 573 (717)
+||++|| |+|.|++.+++|+|.|+| +|+|++|+|||++ +| |+|+++|+++++++.+
T Consensus 229 ~iV~~da~~~dl~~aa~~i~~~~~~~~GQ~C~a~~rv~v~~~~i~-d~f~~~l~~~~~~~~~g~~~~~~~~~~~~~~i~~ 307 (454)
T cd07129 229 VFILPGALAERGEAIAQGFVGSLTLGAGQFCTNPGLVLVPAGPAG-DAFIAALAEALAAAPAQTMLTPGIAEAYRQGVEA 307 (454)
T ss_pred EEEeCCcchHHHHHHHHHHHHHHhcCCCCeecCCceEEEeCcccH-HHHHHHHHHHHhccCCCCCcChHHHHHHHHHHHH
Confidence 9999999 899999999999999987 9999999999999 99 8999999998887532
Q ss_pred -------eEe-cCccc-cc-cc-c-C----C----CCccccccccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEecC-
Q 005041 574 -------GLF-GGPRA-SK-LL-Q-I----P----ETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAED- 632 (717)
Q Consensus 574 -------~~~-g~~~~-~~-~~-p-i----~----~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~I~t~d- 632 (717)
+++ |+... .+ |+ | | + +|++++||+||||++|++|+|+||||+++|+++|||++||||+|
T Consensus 308 a~~~~ga~~l~gg~~~~~g~~~~Ptvl~~~~~~~~~~~i~~~E~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~vft~d~ 387 (454)
T cd07129 308 LAAAPGVRVLAGGAAAEGGNQAAPTLFKVDAAAFLADPALQEEVFGPASLVVRYDDAAELLAVAEALEGQLTATIHGEED 387 (454)
T ss_pred HHhcCCcEEEeCCCcCCCCCccCCEEEEccCCccccchhhcccCCCCeEEEEEeCCHHHHHHHHhcCCCCcEEEEEccCc
Confidence 222 43321 13 33 5 2 2 47899999999999999999999999999999999999999999
Q ss_pred -HHHHHHHHhcC--CeeeEEEcCCCCCC---CCCccCC-ccccccccCcccccccchhhcccEE
Q 005041 633 -QKVAETFLCQV--DSAAVFHNASTRFC---DGARFGL-GAEVGISTSRIHARGPVGVEGLLTT 689 (717)
Q Consensus 633 -~~~a~~~~~~l--~~G~v~iN~~~~~~---~~~pfG~-g~~~G~~~~~~~~~g~~g~~~ft~~ 689 (717)
.++++++++++ ++|+|+||+.+... +..|||| .+.||+|+ .+..|++++++||++
T Consensus 388 ~~~~a~~~~~~l~~~~G~v~iN~~~~~~~~~~~~pfgG~~k~sg~g~--~~~~g~~~~~~~~~~ 449 (454)
T cd07129 388 DLALARELLPVLERKAGRLLFNGWPTGVEVCPAMVHGGPYPATTDPR--FTSVGTAAIERFLRP 449 (454)
T ss_pred hHHHHHHHHHHHHhhCcEEEECCCCccccccCCCCCCCCcCCCCCCc--cccccHHHHHHhccc
Confidence 89999999999 69999999865433 3789999 88888763 222489999999986
No 118
>cd07122 ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydrogenase (ACDH), ALDH family 20-like. Coenzyme A acylating aldehyde dehydrogenase (ACDH, EC=1.2.1.10), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA . The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH and may be critical enzymes in the fermentative pathway.
Probab=100.00 E-value=1.2e-66 Score=575.01 Aligned_cols=376 Identities=20% Similarity=0.252 Sum_probs=300.7
Q ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhhchhHHHHHHhhcChhHHHHHHH-HH
Q 005041 295 AREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAK-SI 373 (717)
Q Consensus 295 v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~g~~~a~~~~~~~~~~~i~~~~~-~~ 373 (717)
+++|+++|++||+.|+++|.++|.++|++++++|++|++||++.+++|+|++. .++. ..++...++ .+
T Consensus 1 ~~~av~~A~~A~~~W~~~~~~eR~~~L~~~a~~l~~~~eela~~~~~E~Gk~~----~ea~-------~~e~~~~~~~~~ 69 (436)
T cd07122 1 VDELVERARKAQREFATFSQEQVDKIVEAVAWAAADAAEELAKMAVEETGMGV----VEDK-------VIKNHFASEYVY 69 (436)
T ss_pred ChHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCc----HHHH-------HHHHHHHHHHHH
Confidence 46899999999999999999999999999999999999999999887776542 1221 124555555 56
Q ss_pred HHHhcccccccccccccccCCCceEEEeecceeEEEEEcCC-Cch-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHH
Q 005041 374 RILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKV 451 (717)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~~ 451 (717)
++++.. +..+.... ..+...+++|+|+|||++|+|| ||. +.++++++||++||+||+|||+.||+|+.+++++
T Consensus 70 ~~~~~~-~~~g~~~~----~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~~~~~ 144 (436)
T cd07122 70 NDIKDM-KTVGVIEE----DEEKGIVEIAEPVGVIAALIPSTNPTSTAIFKALIALKTRNAIIFSPHPRAKKCSIEAAKI 144 (436)
T ss_pred HHHhcC-cceeeecc----CCCCCeEEEeecccEEEEEeCCCCchHHHHHHHHHHHHcCCcEEEECCcchhhHHHHHHHH
Confidence 666542 22222111 1234567889999999999998 686 5679999999999999999999999999999999
Q ss_pred HHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHhhcCCCEEEecCCcceEEEcCCCCHHHHH
Q 005041 452 ITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAK 529 (717)
Q Consensus 452 ~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a~~p~~lElGGk~p~iV~~dADl~~A~ 529 (717)
++++|.++ +|+|++|+|++ ++++++.|..||+||+|+||||+++++..+ ...+|+++|||||||+||++|||+|+|+
T Consensus 145 ~~~~l~eaG~P~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~v~~~a~-~~~~~~~~elgG~~p~iV~~dADl~~A~ 223 (436)
T cd07122 145 MREAAVAAGAPEGLIQWIEEPSIELTQELMKHPDVDLILATGGPGMVKAAY-SSGKPAIGVGPGNVPAYIDETADIKRAV 223 (436)
T ss_pred HHHHHHHcCCCchhEEEecCCChHHHHHHHcCCCcCEEEEcCCHHHHHHHH-hcCCCEEEecCCCCeEEEcCCCCHHHHH
Confidence 99888889 99999999996 556778888899999999999999988764 3479999999999999999999999999
Q ss_pred HHHHhhccCCCc-cccccceEEEcCcccChhhHHHHHHHHHHc-------Cc---------eE---e-cCcc--c----c
Q 005041 530 NIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHE-------GV---------GL---F-GGPR--A----S 582 (717)
Q Consensus 530 ~~i~~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~-------~~---------~~---~-g~~~--~----~ 582 (717)
+.+++|+|.|+| .|++++|+|||++|| |+|+++|+++...+ .+ .+ . +... . .
T Consensus 224 ~~i~~~~f~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~l~~~~~~~~v~~~~~~~~~~~gp~~~~~~~~~~~~~~~ 302 (436)
T cd07122 224 KDIILSKTFDNGTICASEQSVIVDDEIY-DEVRAELKRRGAYFLNEEEKEKLEKALFDDGGTLNPDIVGKSAQKIAELAG 302 (436)
T ss_pred HHHHHHhhccCCCCCCCCCEEEEechhH-HHHHHHHHHhcceecCHHHHHHHHHHhhcCCCCcCccccCcCHHHHHHHcC
Confidence 999999999987 999999999999999 89999999876543 10 00 0 1000 0 0
Q ss_pred cccc------------C-CCCccccccccCceEEEEEeCCHHHHHHHHHhc----CCCceeEEEecCHHHHHHHHhcCCe
Q 005041 583 KLLQ------------I-PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQH----GSAHTDCIVAEDQKVAETFLCQVDS 645 (717)
Q Consensus 583 ~~~p------------i-~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~----~~GL~a~I~t~d~~~a~~~~~~l~~ 645 (717)
..++ + ++|+++ +|.||||++|++|+|+||||+++|++ +|||++||||+|.++++++++++++
T Consensus 303 ~~~~~ga~vl~~~~~~v~~~~~~~-~E~FGPVl~v~~~~~~~eAi~~aN~~~~~~~~GLsa~V~T~d~~~a~~~~~~l~a 381 (436)
T cd07122 303 IEVPEDTKVLVAEETGVGPEEPLS-REKLSPVLAFYRAEDFEEALEKARELLEYGGAGHTAVIHSNDEEVIEEFALRMPV 381 (436)
T ss_pred CCCCCCCeEEEEecCCCCCCCcch-hcccCCeEEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCHHHHHHHHhhCCc
Confidence 1111 1 346777 56799999999999999999999998 8999999999999999999999999
Q ss_pred eeEEEcCCCCCCCC------Ccc----CCccccccccCcccccccchhhcccEEEEEEe
Q 005041 646 AAVFHNASTRFCDG------ARF----GLGAEVGISTSRIHARGPVGVEGLLTTRWILR 694 (717)
Q Consensus 646 G~v~iN~~~~~~~~------~pf----G~g~~~G~~~~~~~~~g~~g~~~ft~~k~v~~ 694 (717)
|+||||+++.+..- +|+ |+|...|.+ ..+..+.++|+++|+|.+
T Consensus 382 G~V~IN~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 435 (436)
T cd07122 382 SRILVNTPSSLGGIGDTYNGLAPSLTLGCGSWGGNS-----TSDNVGPKHLLNIKRVAY 435 (436)
T ss_pred eEEEEeCCccccccCccCCCCCceeeeeccccCCCc-----CCCCCChHHhheeEeecc
Confidence 99999988753211 221 222222211 234578899999999876
No 119
>PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed
Probab=100.00 E-value=1.6e-66 Score=625.59 Aligned_cols=385 Identities=18% Similarity=0.207 Sum_probs=331.9
Q ss_pred hHHHHhc-CCcceEEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
Q 005041 268 SIIKVLE-GKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAA 346 (717)
Q Consensus 268 ~l~~~~t-g~~iGT~i~a~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~ 346 (717)
.+.+|.+ ++.+|++..++ .+||++|+++|++||+.|+++|..+|+++|++++++|++|.++|+.++.+|.||+
T Consensus 662 ~v~nPa~~~~~vg~v~~a~------~~dv~~Av~aA~~A~~~W~~~p~~eRa~iL~r~Adlle~~~~eL~~l~~~EaGKt 735 (1318)
T PRK11809 662 PVINPADPRDIVGYVREAT------PAEVEQALESAVNAAPIWFATPPAERAAILERAADLMEAQMQTLMGLLVREAGKT 735 (1318)
T ss_pred EeECCCCCCeeEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHhCCC
Confidence 3477887 67889988888 8999999999999999999999999999999999999999999999988877654
Q ss_pred HhhchhHHHHHHhhcChhHHHHHHHHHHHHhcccccccccccccccCCCceEEEeecceeEEEEEcCC-Cch-hHHHHHH
Q 005041 347 QEAGYAKSLVSRLALKPGKISSLAKSIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIAS 424 (717)
Q Consensus 347 ~~~g~~~a~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~ 424 (717)
. .++ ..|+..+++.+++|+...+.. . . ...++|+|||++|+|| ||. +.+++++
T Consensus 736 ~----~~A--------~~EV~eaidflryyA~~a~~~---~------~----~~~~~PlGVV~~IsPWNFPlai~~g~ia 790 (1318)
T PRK11809 736 F----SNA--------IAEVREAVDFLRYYAGQVRDD---F------D----NDTHRPLGPVVCISPWNFPLAIFTGQVA 790 (1318)
T ss_pred H----HHH--------HHHHHHHHHHHHHHHHHHHHh---c------C----CceeecccEEEEECCCccHHHHHHHHHH
Confidence 2 122 348899999999998643210 0 0 2358999999999999 686 5678999
Q ss_pred HHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHhh
Q 005041 425 LAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKES 502 (717)
Q Consensus 425 ~ALaaGN~vVlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~ 502 (717)
+||++||+||+||||+||+++..+++++++ + +|+|++|+|+| ++++++.|..||+|++|+||||+++|+.|++.
T Consensus 791 aALaAGN~VV~KPseqTpl~a~~lv~ll~e----AGlP~gvlqlv~G~g~~vg~~Lv~~p~V~~V~FTGSt~tg~~I~~~ 866 (1318)
T PRK11809 791 AALAAGNSVLAKPAEQTPLIAAQAVRILLE----AGVPAGVVQLLPGRGETVGAALVADARVRGVMFTGSTEVARLLQRN 866 (1318)
T ss_pred HHHHcCCeEEEeCCCCcHHHHHHHHHHHHH----hCcCcCeEEEeeCCcHHHHHHHhcCCCcCEEEEeCCHHHHHHHHHH
Confidence 999999999999999999999999999997 7 99999999996 66789999999999999999999999999876
Q ss_pred cC---------CCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccChhhHHHHHHHHHHcC
Q 005041 503 TK---------IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEG 572 (717)
Q Consensus 503 a~---------~p~~lElGGk~p~iV~~dADl~~A~~~i~~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~ 572 (717)
+. +|+++|+|||||+||++|||+|.|++.+++|+|.|+| +|+|.+|+|||++|| |+|+++|+++++++.
T Consensus 867 aA~~l~~~g~~~pliaElGGkNa~IVdsdAdle~Av~~iv~sAF~~aGQrCsA~~rl~V~e~Ia-d~fl~~L~~a~~~l~ 945 (1318)
T PRK11809 867 LAGRLDPQGRPIPLIAETGGQNAMIVDSSALTEQVVADVLASAFDSAGQRCSALRVLCLQDDVA-DRTLKMLRGAMAECR 945 (1318)
T ss_pred HhhhcccccCceeEEEecCCccceEECCCCCHHHHHHHHHHHHHhcCCCccccCcEEEEcHHHH-HHHHHHHHHHHHhcC
Confidence 42 6999999999999999999999999999999999987 999999999999999 899999999998863
Q ss_pred ce----------------------------------Ee-cCcc-----ccccc--c-C---CCCccccccccCceEEEEE
Q 005041 573 VG----------------------------------LF-GGPR-----ASKLL--Q-I---PETRLFHHEYNSMVCTVEI 606 (717)
Q Consensus 573 ~~----------------------------------~~-g~~~-----~~~~~--p-i---~~~~~~~eE~FGPVl~v~~ 606 (717)
+. +. |+.. ..++| | | +++.+++||+||||++|++
T Consensus 946 vGdP~~~~tdvGPvId~~a~~~i~~~I~~a~~~G~~v~~g~~~~~~~~~~G~fv~PTIi~~~~~~~l~eEiFGPVL~V~~ 1025 (1318)
T PRK11809 946 MGNPDRLSTDIGPVIDAEAKANIERHIQAMRAKGRPVFQAARENSEDWQSGTFVPPTLIELDSFDELKREVFGPVLHVVR 1025 (1318)
T ss_pred CCCcccccCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCCCCCCCCCCCeEEeeEEEeccchhhhcCcccCceEEEEE
Confidence 21 11 1110 11333 5 3 4577899999999999999
Q ss_pred eC--CHHHHHHHHHhcCCCceeEEEecCHHHHHHHHhcCCeeeEEEcCCCCCC--CCCccCCccccccccCcccccccch
Q 005041 607 VD--DVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFC--DGARFGLGAEVGISTSRIHARGPVG 682 (717)
Q Consensus 607 ~~--~~deAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~v~iN~~~~~~--~~~pfG~g~~~G~~~~~~~~~g~~g 682 (717)
|+ |+||||+++|+++|||++||||+|.+++.++++++++|+||||+..... ...||||.+.||+|. +.+|+++
T Consensus 1026 ~~~~~ldeaI~~iN~t~yGLt~gV~Srd~~~~~~v~~~l~aGnvyINr~~~gavvg~qPFGG~g~SG~G~---kaGGp~y 1102 (1318)
T PRK11809 1026 YNRNQLDELIEQINASGYGLTLGVHTRIDETIAQVTGSAHVGNLYVNRNMVGAVVGVQPFGGEGLSGTGP---KAGGPLY 1102 (1318)
T ss_pred eCCCCHHHHHHHHhcCCCCceEEEEeCCHHHHHHHHHhCCEeEEEECCCCcCCCcCCCCCCCcCcCCCCC---CCCCHHH
Confidence 96 7999999999999999999999999999999999999999999866542 346999998888752 3579999
Q ss_pred hhcccEEEE
Q 005041 683 VEGLLTTRW 691 (717)
Q Consensus 683 ~~~ft~~k~ 691 (717)
+..|++.+.
T Consensus 1103 L~~f~~~~~ 1111 (1318)
T PRK11809 1103 LYRLLATRP 1111 (1318)
T ss_pred HHHHhccCC
Confidence 999999874
No 120
>PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed
Probab=100.00 E-value=7.8e-66 Score=621.69 Aligned_cols=389 Identities=18% Similarity=0.196 Sum_probs=336.0
Q ss_pred HHHHhc-CCcceEEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
Q 005041 269 IIKVLE-GKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQ 347 (717)
Q Consensus 269 l~~~~t-g~~iGT~i~a~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~ 347 (717)
+.+|.+ ++.+|++..++ .+++++|+++|++||+.|+++|.++|+++|++++++|++++++|++++++|.||+.
T Consensus 571 v~nP~~~~~~vg~v~~a~------~~~v~~Av~aA~~A~~~W~~~~~~~Ra~iL~raAdll~~~~~eL~~l~~~E~GKt~ 644 (1208)
T PRK11905 571 VLNPADHDDVVGTVTEAS------AEDVERALAAAQAAFPEWSATPAAERAAILERAADLMEAHMPELFALAVREAGKTL 644 (1208)
T ss_pred EECCCCCCceEEEEeCCC------HHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCH
Confidence 477888 78889998888 89999999999999999999999999999999999999999999999887765542
Q ss_pred hhchhHHHHHHhhcChhHHHHHHHHHHHHhcccccccccccccccCCCceEEEeecceeEEEEEcCC-Cch-hHHHHHHH
Q 005041 348 EAGYAKSLVSRLALKPGKISSLAKSIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 425 (717)
Q Consensus 348 ~~g~~~a~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ 425 (717)
.++ ..|+.++++.+++|+...+... + ...++|+|||++|+|| ||. +.++++++
T Consensus 645 ----~ea--------~~Ev~eaid~lr~ya~~a~~~~----------~---~~~~~P~GVv~~IsPwNfPlai~~g~i~a 699 (1208)
T PRK11905 645 ----ANA--------IAEVREAVDFLRYYAAQARRLL----------N---GPGHKPLGPVVCISPWNFPLAIFTGQIAA 699 (1208)
T ss_pred ----HHH--------HHHHHHHHHHHHHHHHHHHHhc----------C---CceecCccEEEEEcCCcCHHHHHHHHHHH
Confidence 122 3478889999999986432110 0 1357899999999998 786 56789999
Q ss_pred HHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHhhc
Q 005041 426 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST 503 (717)
Q Consensus 426 ALaaGN~vVlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a 503 (717)
||++||+||+|||++||+++..+++++++ + +|+|++|+|+| ++++++.|..||+|++|+||||+++|+.|++.+
T Consensus 700 ALaaGN~VV~KPse~tpl~a~~l~~ll~e----AGlP~gvl~lV~G~g~~vg~~Lv~~p~v~~V~FTGSt~vg~~I~~~~ 775 (1208)
T PRK11905 700 ALVAGNTVLAKPAEQTPLIAARAVRLLHE----AGVPKDALQLLPGDGRTVGAALVADPRIAGVMFTGSTEVARLIQRTL 775 (1208)
T ss_pred HHHcCCEEEEeCCcccHHHHHHHHHHHHH----cCCCcccEEEeeCCchHHHHHHHcCCCcCEEEEeCCHHHHHHHHHHH
Confidence 99999999999999999999999999987 7 99999999996 566888899999999999999999999998765
Q ss_pred ------CCCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccChhhHHHHHHHHHHcCce--
Q 005041 504 ------KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGVG-- 574 (717)
Q Consensus 504 ------~~p~~lElGGk~p~iV~~dADl~~A~~~i~~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~~-- 574 (717)
.+|+++|+|||||+||++|||+|.|++.+++|+|.|+| .|+|++|+|||+++| |+|+++|+++++++.+.
T Consensus 776 A~~~~~~~pli~ElGGkN~~IV~~dAdle~Av~~iv~saF~~aGQ~CsA~~rl~V~~si~-d~f~e~L~~~~~~l~vGdP 854 (1208)
T PRK11905 776 AKRSGPPVPLIAETGGQNAMIVDSSALPEQVVADVIASAFDSAGQRCSALRVLCLQEDVA-DRVLTMLKGAMDELRIGDP 854 (1208)
T ss_pred HhhcCCCCeEEEecCCcCeEEEcCCCCHHHHHHHHHHHHHhcCCCccccCcEEEEehhHH-HHHHHHHHHHHHHhcCCCc
Confidence 27999999999999999999999999999999999987 999999999999999 79999999999876421
Q ss_pred --------------------------------Ee-cC-cc--ccccc--c-C---CCCccccccccCceEEEEEeC--CH
Q 005041 575 --------------------------------LF-GG-PR--ASKLL--Q-I---PETRLFHHEYNSMVCTVEIVD--DV 610 (717)
Q Consensus 575 --------------------------------~~-g~-~~--~~~~~--p-i---~~~~~~~eE~FGPVl~v~~~~--~~ 610 (717)
+. |+ +. ..++| | | +++.+++||+||||++|++|+ |+
T Consensus 855 ~d~~t~~GPvId~~a~~~i~~~I~~a~~~G~~l~~g~~~~~~~~G~fv~PTVl~~~~~~~~~eEiFGPVL~V~~y~~~dl 934 (1208)
T PRK11905 855 WRLSTDVGPVIDAEAQANIEAHIEAMRAAGRLVHQLPLPAETEKGTFVAPTLIEIDSISDLEREVFGPVLHVVRFKADEL 934 (1208)
T ss_pred hhccCCccCccCHHHHHHHHHHHHHHHHCCCEEEEccCCCCCCCCeEEeeEEEecCChHHhcCCccCceEEEEEeCCCCH
Confidence 11 11 00 11333 5 3 457889999999999999997 79
Q ss_pred HHHHHHHHhcCCCceeEEEecCHHHHHHHHhcCCeeeEEEcCCCCCC--CCCccCCccccccccCcccccccchhhcccE
Q 005041 611 RAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFC--DGARFGLGAEVGISTSRIHARGPVGVEGLLT 688 (717)
Q Consensus 611 deAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~v~iN~~~~~~--~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~ 688 (717)
||||+++|+++|||++||||+|.+++.++++++++|+||||+..... ...||||.+.||+|. +.+|++++..|++
T Consensus 935 deaI~~iN~t~yGLt~~I~S~d~~~~~~~~~~l~aGnvyIN~~~~ga~vg~qPFGG~~~SG~G~---kaGGp~~L~~f~~ 1011 (1208)
T PRK11905 935 DRVIDDINATGYGLTFGLHSRIDETIAHVTSRIRAGNIYVNRNIIGAVVGVQPFGGEGLSGTGP---KAGGPLYLGRLVR 1011 (1208)
T ss_pred HHHHHHHhcCCCCceEEEEcCCHHHHHHHHHhCCEeEEEECCCCCCCccCCCCCCCCCCCCCCC---cCCCHHHHHHHhh
Confidence 99999999999999999999999999999999999999999876543 357999999888752 3579999999999
Q ss_pred EEEEEecC
Q 005041 689 TRWILRGN 696 (717)
Q Consensus 689 ~k~v~~~~ 696 (717)
.|++.++.
T Consensus 1012 ~k~v~~~~ 1019 (1208)
T PRK11905 1012 EAPTPIPP 1019 (1208)
T ss_pred cceeeccc
Confidence 99998754
No 121
>cd07084 ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like. ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway.
Probab=100.00 E-value=1.1e-65 Score=572.83 Aligned_cols=375 Identities=13% Similarity=0.101 Sum_probs=308.1
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhhchhHHHHHHhhcChhHHHHHHHHHHH
Q 005041 296 REMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRI 375 (717)
Q Consensus 296 ~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~g~~~a~~~~~~~~~~~i~~~~~~~~~ 375 (717)
++|+++|++||+.|+++|..+|.++|++++++|++|++||+++++.|+|++.+ . ..|+...+..+++
T Consensus 2 ~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~-----~--------~~ev~~~i~~~~~ 68 (442)
T cd07084 2 ERALLAADISTKAARRLALPKRADFLARIIQRLAAKSYDIAAGAVLVTGKGWM-----F--------AENICGDQVQLRA 68 (442)
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHcCCchh-----h--------hhhhcchHHHHHH
Confidence 57899999999999999999999999999999999999999998877765531 1 1245555555565
Q ss_pred Hhcccccc---cccccccccCCCceEEEeecceeEEEEEcCC-Cch-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHH
Q 005041 376 LADMEEPI---GQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHK 450 (717)
Q Consensus 376 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~ 450 (717)
++...+.. +..........+...+.+++|+|||++|+|| ||. +.++++++||++||+||+|||+.+|.++..+++
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~vvlKps~~~p~~~~~l~~ 148 (442)
T cd07084 69 RAFVIYSYRIPHEPGNHLGQGLKQQSHGYRWPYGPVLVIGAFNFPLWIPLLQLAGALAMGNPVIVKPHTAVSIVMQIMVR 148 (442)
T ss_pred HHHHHHhccccccccccCCCCccccceEEeecceeEEEEcCCccHhHHHHHHHHHHHHcCCeEEEECCCCchHHHHHHHH
Confidence 54332211 1100000000123457889999999999998 786 567899999999999999999999999999999
Q ss_pred HHHHhcccc-c-CcCceEEecCCChhhhhhcCCCCccEEEeecCHHHHHHHHhhcC-CCEEEecCCcceEEEcCCC-CHH
Q 005041 451 VITSAIPDT-V-GEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK-IPVLGHADGICHVYVDKSA-NLD 526 (717)
Q Consensus 451 ~~~~al~~a-l-P~gvv~vv~~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a~-~p~~lElGGk~p~iV~~dA-Dl~ 526 (717)
++++ + + |+|++|+|++....+..|..||++|+|+||||+++|+.|++.+. +|+++|||||||+||++|| |+|
T Consensus 149 ~l~~----ag~~P~g~~~~v~g~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~a~~~~v~lElgG~~~~iV~~dadd~~ 224 (442)
T cd07084 149 LLHY----AGLLPPEDVTLINGDGKTMQALLLHPNPKMVLFTGSSRVAEKLALDAKQARIYLELAGFNWKVLGPDAQAVD 224 (442)
T ss_pred HHHH----hCCCCccceEEeeCCcHHHHHHHcCCCCCEEEEECCHHHHHHHHHhccCCcEEEeccCcCcEEECCChhhHH
Confidence 9997 6 6 99999999964337787888999999999999999999999886 8999999999999999999 699
Q ss_pred HHHHHHHhhccCCCc-cccccceEEEcCc-ccChhhHHHHHHHHHHcCc--------------------------eE-ec
Q 005041 527 VAKNIVIDAKIDYPA-ACNAMETLLVHKD-LACNGALNELVVELQHEGV--------------------------GL-FG 577 (717)
Q Consensus 527 ~A~~~i~~~~~~n~g-~C~a~~rv~V~~~-i~d~~f~~~l~~~~~~~~~--------------------------~~-~g 577 (717)
.|++.+++++|.|+| .|+|++|+|||++ +| ++|+++|+++++++.+ ++ +|
T Consensus 225 ~a~~~i~~~~~~~~GQ~C~a~~rl~V~~~~i~-~~f~~~l~~~~~~~~~g~~~~gpl~~~~~~~~i~~a~~~gga~~~~g 303 (442)
T cd07084 225 YVAWQCVQDMTACSGQKCTAQSMLFVPENWSK-TPLVEKLKALLARRKLEDLLLGPVQTFTTLAMIAHMENLLGSVLLFS 303 (442)
T ss_pred HHHHHHHHHHhcccCCeecCCcEEEEeCCccH-HHHHHHHHHHHHhcccCccccChhhhHHHHHHHHHHHhcCCcEEEeC
Confidence 999999999999987 9999999999999 99 7999999998887531 12 23
Q ss_pred Cccc--------cc-cc-c-C-----CCC---ccccccccCceEEEEEeCC--HHHHHHHHHhcCCCceeEEEecCHHHH
Q 005041 578 GPRA--------SK-LL-Q-I-----PET---RLFHHEYNSMVCTVEIVDD--VRAAIDHIHQHGSAHTDCIVAEDQKVA 636 (717)
Q Consensus 578 ~~~~--------~~-~~-p-i-----~~~---~~~~eE~FGPVl~v~~~~~--~deAi~~aN~~~~GL~a~I~t~d~~~a 636 (717)
+... .+ |+ | | ++| ++++||+||||++|++|+| +||||+++|+++|||++||||+|.+++
T Consensus 304 g~~~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~ 383 (442)
T cd07084 304 GKELKNHSIPSIYGACVASALFVPIDEILKTYELVTEEIFGPFAIVVEYKKDQLALVLELLERMHGSLTAAIYSNDPIFL 383 (442)
T ss_pred CcccccCCCCCcCCcccCCeEEEecCcccccchHHheeccCceEEEEEeCCccHHHHHHHHHhCCCCeeEEEEeCCHHHH
Confidence 3221 13 33 5 2 245 8999999999999999999 999999999999999999999999999
Q ss_pred HHHHhcC-CeeeEEEcCC-CC-CCCCCccCC-ccccccccCcccc-cccchhhcccEEEEE
Q 005041 637 ETFLCQV-DSAAVFHNAS-TR-FCDGARFGL-GAEVGISTSRIHA-RGPVGVEGLLTTRWI 692 (717)
Q Consensus 637 ~~~~~~l-~~G~v~iN~~-~~-~~~~~pfG~-g~~~G~~~~~~~~-~g~~g~~~ft~~k~v 692 (717)
+++++++ ++|+||||+. +. ..+..|||| ++.||+|. + +|.+++++||+...+
T Consensus 384 ~~~~~~l~~~G~v~iN~~~~~~~~~~~~~gG~~k~sG~g~----~~~g~~~~~~~~~~~~~ 440 (442)
T cd07084 384 QELIGNLWVAGRTYAILRGRTGVAPNQNHGGGPAADPRGA----GIGGPEAIKLVWRCHAE 440 (442)
T ss_pred HHHHHHHHhcCeEEECCCCCCCccccccCCCCCCCCCCCc----cccchHHhhheeeeeee
Confidence 9999999 9999999976 33 344567776 56888763 3 388999999987654
No 122
>TIGR02288 PaaN_2 phenylacetic acid degradation protein paaN. This family includes sequences from Burkholderia, Bordetella, Streptomyces. Other PaaN enzymes are represented by a separate model, TIGR02278.
Probab=100.00 E-value=2.5e-65 Score=575.31 Aligned_cols=366 Identities=16% Similarity=0.132 Sum_probs=295.7
Q ss_pred HHHhcCCcceEEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHh-
Q 005041 270 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE- 348 (717)
Q Consensus 270 ~~~~tg~~iGT~i~a~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~- 348 (717)
.+|++++.++++..++ . ++++++|++||+.|+++++.+|.++|++++++|++|.+||++++++|.|++..
T Consensus 70 ~~P~t~~~~~~~~~~~------~---~~av~aA~~A~~~W~~~~~~~R~~vL~~~a~~l~~~~~elA~~~~~etGk~~~~ 140 (551)
T TIGR02288 70 RSPYGVELGVTYPQCD------G---DALLDAAHAALPGWRDAGARARAGVCLEILQRLNARSFEIAHAVMHTTGQAFMM 140 (551)
T ss_pred cCCCCCCEEEEEcCCC------H---HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHhCCCHHH
Confidence 5678888888876665 3 88999999999999999999999999999999999999999999988876642
Q ss_pred ---hchhHHHHHHhhcChhHHHHHHHHHHHHhcccc-cccccc---ccc-ccCCCceEEEeecceeEEEEEcCC-Cch-h
Q 005041 349 ---AGYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQIL---KRT-ELADGLILEKTSCPLGVLLIVFES-RPD-A 418 (717)
Q Consensus 349 ---~g~~~a~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~---~~~-~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~ 418 (717)
+|++- +....++.+++++.... ..+... +.. ........+.+++|+|||++|+|| ||. +
T Consensus 141 a~e~gkp~-----------~~~r~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vI~PwNfP~~~ 209 (551)
T TIGR02288 141 AFQAGGPH-----------AQDRGLEAVAYAYREMSRIPETAVWEKPQGKNDPLKLKKRFTIVPRGIALVIGCSTFPTWN 209 (551)
T ss_pred HHhccChH-----------HHHHHHHHHHHHHHHHHhccCcccccccCCCCCcccccceEEEEecCeEEEEcCcccHHHH
Confidence 22210 22333444555443221 112111 100 000011123478999999999998 786 5
Q ss_pred HHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC--CChhhhhhcCCCCccEEEeecCHHH
Q 005041 419 LVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS--REEIPDLLKLDDVIDLVIPRGSNKL 495 (717)
Q Consensus 419 ~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~--~~~~~~~l~~~~~v~~v~fTGs~~~ 495 (717)
..+++++||++||+||+||||.||+++.++.+++.+++.++ ||+|+||+|++ +.++++.|..||+|++|+||||+++
T Consensus 210 ~~~~l~~ALaaGN~VVlKPs~~tpl~~~~~~~~l~e~l~eAGlP~gvv~lv~g~~g~~~~~~L~~~p~v~~I~FTGSt~~ 289 (551)
T TIGR02288 210 TYPGLFASLATGNPVLVKPHPGAILPLALTVQVAREVLGEAGFDPNLVTLAAFDPGHEAAQRLATDPAVRIIDFTGSNAF 289 (551)
T ss_pred HHHHHHHHHHcCCeEEEECCcccchhHHHHHHHHHHHHHHcCcChhHEEEecCCCcHHHHHHHHhCCCccEEEEECCHHH
Confidence 67999999999999999999999998886666666666668 99999999985 4568888889999999999999999
Q ss_pred HHHHHhhcC-CCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCc---------ccChhhHHHH
Q 005041 496 VSQIKESTK-IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKD---------LACNGALNEL 564 (717)
Q Consensus 496 g~~i~~~a~-~p~~lElGGk~p~iV~~dADl~~A~~~i~~~~~~n~g-~C~a~~rv~V~~~---------i~d~~f~~~l 564 (717)
|+.|++.+. +|+++|||||||+||++|||+|.|++.+++|+|.|+| +|++++|+|||++ +| |+|+++|
T Consensus 290 G~~I~~~aa~~~v~lElGGknp~IV~~dADld~aa~~i~~~~f~~sGQ~Cta~~ri~V~~~~i~~~~g~~i~-def~~~L 368 (551)
T TIGR02288 290 GQWLEQNARQAQVYTEKAGVNTVIIESTDDYKAMLRNLAFSLSLYSGQMCTTTQAILVPRDGIRTDQGRKSY-DEVAADL 368 (551)
T ss_pred HHHHHHhcccCcEEeecCCcCeEEEcCCCCHHHHHHHHHHHHHhhCCCCCCCCCEEEEeccccccccchhHH-HHHHHHH
Confidence 999998875 8999999999999999999999999999999999987 9999999999999 79 7999999
Q ss_pred HHHHHHcC-----------------------------ceEecCccc-----cc--cc-c-C----C-CCccccccccCce
Q 005041 565 VVELQHEG-----------------------------VGLFGGPRA-----SK--LL-Q-I----P-ETRLFHHEYNSMV 601 (717)
Q Consensus 565 ~~~~~~~~-----------------------------~~~~g~~~~-----~~--~~-p-i----~-~~~~~~eE~FGPV 601 (717)
+++++++- ..+.|+... .+ ++ | | + +|++++||+||||
T Consensus 369 ~~~~~~lvGdp~~~~~~~Gplis~~~~~ri~~a~~~G~v~~gG~~~~~~~~~g~~~~~Ptvl~~~~~d~~i~~eE~FGPV 448 (551)
T TIGR02288 369 ATAIDGLLGDPARATAVLGAIQSPDTLARIAEARALGEVLLASTKIEHPEFPGARVRTPLLLKCDAADEAAYMQERFGPI 448 (551)
T ss_pred HHHHHHhcCCcccccccccCcCCHHHHHHHHHHHhCCCEEEcCccCCCCCCCCCEEeccEEEEcCCCCCHHHhCCCcCCE
Confidence 99988751 011233221 12 23 4 2 3 6899999999999
Q ss_pred EEEEEeCCHHHHHHHHHhc--CCC-ceeEEEecCHHHHHHHHhcC----------CeeeEEEcCCCCC
Q 005041 602 CTVEIVDDVRAAIDHIHQH--GSA-HTDCIVAEDQKVAETFLCQV----------DSAAVFHNASTRF 656 (717)
Q Consensus 602 l~v~~~~~~deAi~~aN~~--~~G-L~a~I~t~d~~~a~~~~~~l----------~~G~v~iN~~~~~ 656 (717)
++|++|+|+||||+++|++ +|| |++||||+|.++++++.+++ ++|.|+||.+..+
T Consensus 449 l~V~~~~d~deAi~~aN~~~~~~G~Lta~VfT~d~~~~~~~~~~~~~~~~~l~iN~~G~v~vN~~~~~ 516 (551)
T TIGR02288 449 AFVVAVDDGAHAVELARRSVREKGAMTVGAYTTDPEVVDAVQEAAWDAAVALSLNLTGGVFVNQSAAF 516 (551)
T ss_pred EEEEEECCHHHHHHHHhcCCCCCCCceEEEEeCCHHHHHHHHHHHHHhccCeeecCCceEEEccCCCC
Confidence 9999999999999999999 667 99999999999999999999 9999999986543
No 123
>PRK13805 bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional
Probab=100.00 E-value=2.8e-64 Score=602.42 Aligned_cols=385 Identities=17% Similarity=0.228 Sum_probs=312.7
Q ss_pred HhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhhchhHHHHHHhhcChhHHHHHHH
Q 005041 292 QVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAK 371 (717)
Q Consensus 292 ~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~g~~~a~~~~~~~~~~~i~~~~~ 371 (717)
.+|+++++++|++||++|+++|.++|.++|++++++|++|+++|++++++|.|++. .++.. .+...+..
T Consensus 11 ~~~v~~av~~A~~A~~~w~~~~~~~R~~il~~~a~~l~~~~~~la~~~~~EtGk~~----~e~~~-------~~~~~~~~ 79 (862)
T PRK13805 11 VAELDALVEKAKKAQEEFATFTQEQVDKIVRAAALAALDARIPLAKMAVEETGRGV----VEDKV-------IKNHFASE 79 (862)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCh----HHHHH-------HHHHHHHH
Confidence 78999999999999999999999999999999999999999999999988876652 12211 12334445
Q ss_pred HHHHHhcccccccccccccccCCCceEEEeecceeEEEEEcCC-Cch-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHH
Q 005041 372 SIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILH 449 (717)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~ 449 (717)
.++++....+..|.. . ...+...+++++|+|||++|+|| ||. +.++++++||++||+||+|||+.||+|+..++
T Consensus 80 ~~~~~~~~~~~~g~~-~---~~~~~~~~~~~~P~GVv~~I~pwn~P~~~~~~~~~~ALaaGN~vVlKps~~a~~t~~~~~ 155 (862)
T PRK13805 80 YIYNSYKDEKTVGVI-E---EDDEFGIIEIAEPVGVIAGITPTTNPTSTAIFKALIALKTRNPIIFSFHPRAQKSSIAAA 155 (862)
T ss_pred HHHHHhcCCCccccc-C---cCCCCCeEEEeecceEEEEEeCCCChhHHHHHHHHHHHHhCCcEEEECCcchHHHHHHHH
Confidence 554443322222321 1 11234567889999999999998 796 55689999999999999999999999999999
Q ss_pred HHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHhhcCCCEEEecCCcceEEEcCCCCHHH
Q 005041 450 KVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDV 527 (717)
Q Consensus 450 ~~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a~~p~~lElGGk~p~iV~~dADl~~ 527 (717)
++++++++++ +|+|+||+|++ +.+.++.|..||+||+|+||||+++++.+ +...+|+++|+|||||+||++|||+|+
T Consensus 156 ~l~~~~l~~aG~p~g~v~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~v~~~a-~~~~~pv~~e~gGk~p~iV~~dADl~~ 234 (862)
T PRK13805 156 KIVLDAAVAAGAPKDIIQWIEEPSVELTNALMNHPGIALILATGGPGMVKAA-YSSGKPALGVGAGNVPAYIDKTADIKR 234 (862)
T ss_pred HHHHHHHHHcCcCcccEEEecCCCHHHHHHHHcCCCccEEEecCCHHHHHHH-HhcCCCeEEECCCCCeEEEeCCCCHHH
Confidence 9999988889 99999999996 55667777789999999999999998876 345799999999999999999999999
Q ss_pred HHHHHHhhccCCCc-cccccceEEEcCcccChhhHHHHHHHHHHc-------------------Cc--eEecCccc----
Q 005041 528 AKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHE-------------------GV--GLFGGPRA---- 581 (717)
Q Consensus 528 A~~~i~~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~-------------------~~--~~~g~~~~---- 581 (717)
|++.+++|+|+|+| +|+|++|||||++|| |+|+++|+++...+ +. .++|+...
T Consensus 235 Aa~~i~~~k~~n~GQ~C~a~~~v~V~~~i~-d~f~~~l~~~g~~l~~~~~~~~v~~~i~~a~~~~~~~~~~g~~~~~~~~ 313 (862)
T PRK13805 235 AVNDILLSKTFDNGMICASEQAVIVDDEIY-DEVKEEFASHGAYFLNKKELKKLEKFIFGKENGALNADIVGQSAYKIAE 313 (862)
T ss_pred HHHHHHHhhhccCCCccCCCceEEEehhhH-HHHHHHHHHhCCeeCCHHHHHHHHHHHhhccCCCcCccccCCCHHHHHH
Confidence 99999999999876 999999999999999 89999997642110 00 12232110
Q ss_pred -cc-cc-c--------C----CCCccccccccCceEEEEEeCCHHHHHHHHHh----cCCCceeEEEecCHHHHHHHHhc
Q 005041 582 -SK-LL-Q--------I----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQ----HGSAHTDCIVAEDQKVAETFLCQ 642 (717)
Q Consensus 582 -~~-~~-p--------i----~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~----~~~GL~a~I~t~d~~~a~~~~~~ 642 (717)
.+ ++ | + ++|++++ |+||||++|++|+|+||||+++|+ ++|||+++|||+|.+++++|+++
T Consensus 314 ~~G~~~~p~~~~~i~~l~~v~~~~~~~~-E~fgPVl~v~~~~~~deAi~~~n~~~~~~~~gl~~~i~t~d~~~~~~~~~~ 392 (862)
T PRK13805 314 MAGFKVPEDTKILIAEVKGVGESEPLSH-EKLSPVLAMYKAKDFEDAVEKAEKLVEFGGLGHTAVIYTNDDELIKEFGLR 392 (862)
T ss_pred HcCCCCCCCCeEEEEecCCCCCCCcchh-cccCcEEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHhh
Confidence 02 12 2 2 2466666 799999999999999999999998 48999999999999999999999
Q ss_pred CCeeeEEEcCCC----------CCCCCCccCCccccccccCcccccccchhhcccEEEEEEecCcee
Q 005041 643 VDSAAVFHNAST----------RFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHV 699 (717)
Q Consensus 643 l~~G~v~iN~~~----------~~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v~~~~~~~ 699 (717)
+++|+|+||.++ .+.+++|||+ +.+|.+ ..+|+.|+++|++.|+|..+....
T Consensus 393 l~~g~v~vN~~~~~~~~~~~~~~~~~~~~fG~-G~~g~~----~~~g~~g~~~~~~~k~v~~~~~~~ 454 (862)
T PRK13805 393 MKACRILVNTPSSQGGIGDLYNKLAPSLTLGC-GSWGGN----SVSENVGAKHLLNIKTVAKRRENM 454 (862)
T ss_pred CCccEEEEeCCccccccccccCCcCccccccc-cCCCCC----cCCCCCCHHHhheeeeeeeccccc
Confidence 999999999986 4567889997 444543 245999999999999998765433
No 124
>KOG2454 consensus Betaine aldehyde dehydrogenase [Energy production and conversion]
Probab=100.00 E-value=4.8e-64 Score=508.93 Aligned_cols=419 Identities=17% Similarity=0.186 Sum_probs=349.6
Q ss_pred HHHhcCCcceEEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhh
Q 005041 270 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 349 (717)
Q Consensus 270 ~~~~tg~~iGT~i~a~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~ 349 (717)
+.|.+|+-+|.+..-+ +.|+++-+..|++||++|.+.+..+|.+.|+.+.+.|.+|.|-+++...+|.||.
T Consensus 69 ycPatg~yLG~fp~~~------~tdide~v~la~kAQktW~~ssF~~Rr~fL~~L~~yIi~nQdliaevacrDtGKT--- 139 (583)
T KOG2454|consen 69 YCPATGKYLGYFPALS------PTDIDERVTLARKAQKTWAQSSFKLRRQFLRILLKYIIENQDLIAEVACRDTGKT--- 139 (583)
T ss_pred ecCCCcceeeecccCC------hhhHHHHHHHHHHHHhhhhhccHHHHHHHHHHHHHHHhhchhheeeeeecccCch---
Confidence 5678899999988777 7899999999999999999999999999999999999999999999888887654
Q ss_pred chhHHHHHHhhcChhHHHHHHHHHHHHhcccc-cccccccccccCCCceEEEeecceeEEEEEcCC-Cch-hHHHHHHHH
Q 005041 350 GYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 426 (717)
Q Consensus 350 g~~~a~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~A 426 (717)
+.++.+.++..+.+++.+.+.+=++|-...+ +-+... .-...++.++|+||+++|.|| ||. ..+.++..|
T Consensus 140 -mvDAs~GEIlvTlEKI~Wtl~~Ger~L~P~~Rpn~~~~------~yKg~~v~yePLGVI~aiVsWNYPfHN~lgPiiaA 212 (583)
T KOG2454|consen 140 -MVDASLGEILVTLEKITWTLSEGERWLKPESRPNGRAM------LYKGSRVEYEPLGVIGAIVSWNYPFHNILGPIIAA 212 (583)
T ss_pred -hhhhhHhHHHHHHHHhhhhhhcchhhcCCcCCCchhhe------eeccceEEEeecceEEEeeecCCchhhhhhHHHHH
Confidence 2344445555566666666655554433211 111100 112246889999999999998 785 567899999
Q ss_pred HHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecCCChhhhhhcCCCCccEEEeecCHHHHHHHHhhc--
Q 005041 427 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST-- 503 (717)
Q Consensus 427 LaaGN~vVlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a-- 503 (717)
|.+||++|+|-||++.+++....|+++.+|+.. -||+++|++++-+++++.|.+|+.|++|.|.||..+++.|++.|
T Consensus 213 lFsGNaIVvK~SE~~~WS~~fy~e~ir~~L~a~g~~p~LVq~itclpd~a~~ltSh~g~khitFiGSqpvak~i~~~AAk 292 (583)
T KOG2454|consen 213 LFSGNAIVVKVSEHASWSGCFYFEIIRAALAAVGAPPNLVQVITCLPDTAEALTSHSGVKHITFIGSQPVAKMIMRNAAK 292 (583)
T ss_pred HhcCCeEEEEeecceeeehhhHHHHHHHHHHHcCCCcchhheeecCcchHhHhhcCCCcceEEEecCcHHHHHHHHhhhh
Confidence 999999999999999999999999999999877 99999999998778899999999999999999999999999887
Q ss_pred -CCCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccChhhHHHHHHHHHHcCc--------
Q 005041 504 -KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV-------- 573 (717)
Q Consensus 504 -~~p~~lElGGk~p~iV~~dADl~~A~~~i~~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~-------- 573 (717)
.+|+++|||||+|+||++|||++..+..+++|-|+.+| .|+..+|++||+++| |.|+..|.++++....
T Consensus 293 ~LTPv~lELGGKDafIi~dda~l~~v~si~mRGtfQSsGQNCiGiER~iv~k~~Y-d~~i~~l~~rv~s~r~G~~~~~~v 371 (583)
T KOG2454|consen 293 TLTPVTLELGGKDAFIICDDADLSHVASIAMRGTFQSSGQNCIGIERFIVHKDIY-DAFIGQLTKRVKSVRAGPPLTGRV 371 (583)
T ss_pred hcCcEEEeecCcccEEEeccccHHHHHHHHHhhhhhhcCCcccceeEEEEecchH-HHHHHHHHHHHHHHHcCCCccCcc
Confidence 38999999999999999999999999999999999987 999999999999999 7999999888876421
Q ss_pred --------------------------eE-ecCccc-------cccc-c---C---CCCccccccccCceEEEEEeCCHHH
Q 005041 574 --------------------------GL-FGGPRA-------SKLL-Q---I---PETRLFHHEYNSMVCTVEIVDDVRA 612 (717)
Q Consensus 574 --------------------------~~-~g~~~~-------~~~~-p---i---~~~~~~~eE~FGPVl~v~~~~~~de 612 (717)
++ .||.+. ..|| | | +.|+|+|||.|||+++|+++++.|+
T Consensus 372 DMGAm~s~nrfdhLesLv~DAv~KGArl~~gGsrF~Hpkyp~g~YF~PTlLvdvt~eMKIaqeE~FgPI~~im~ak~~eh 451 (583)
T KOG2454|consen 372 DMGAMCSQNRFDHLESLVNDAVDKGARLAVGGSRFGHPKYPVGQYFPPTLLVDVTHEMKIAQEEAFGPIMPIMQAKTDEH 451 (583)
T ss_pred chhhhhhccchHHHHHHHHHHHhhcchhhhcccccCCCCCCcccccCCeEEEecCchhhhHhhhccccchhhhhcCChHH
Confidence 11 122211 1234 4 2 3699999999999999999999999
Q ss_pred HHHHHHhcCCCceeEEEecCHHHHHHHHhcCCeeeEEEcCCCCC-CCCCccCCccccccccCcccccccchhhcccEEEE
Q 005041 613 AIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRF-CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRW 691 (717)
Q Consensus 613 Ai~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~v~iN~~~~~-~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~ 691 (717)
+|+++|+++|||+++||+.|..++.+++.++++|+|-||+...+ ...+||||.+.||+| + ..|.+|++..++.|+
T Consensus 452 ~i~lAN~s~fgLG~sVFg~dk~~c~y~a~~lqtG~vAiNDFasfY~cQlPFGG~k~SGyG--r--FaG~EGLrg~Cn~Ks 527 (583)
T KOG2454|consen 452 VIKLANDSRFGLGCSVFGGDKHRCKYIASQLQTGVVAINDFASFYMCQLPFGGVKDSGYG--R--FAGIEGLRGCCNVKS 527 (583)
T ss_pred HHhhccCCcccccceeccccHHHHHHHHhhhhccceeehhhhhhheeccccCCccCCCcc--c--cccHHHHHHHhcccc
Confidence 99999999999999999999999999999999999999997654 456999999999986 3 368999999999999
Q ss_pred EEecCceee--cCCCCceee
Q 005041 692 ILRGNGHVV--DGDQGVVYT 709 (717)
Q Consensus 692 v~~~~~~~~--~~~~~~~~~ 709 (717)
|.+.....- +-+-++.|.
T Consensus 528 v~yd~~~~~~t~ip~aldyp 547 (583)
T KOG2454|consen 528 VAYDRVAENATEIPEALDYP 547 (583)
T ss_pred eeccchhhhhccCCcccccc
Confidence 987632222 344445443
No 125
>cd07127 ALDH_PAD-PaaZ Phenylacetic acid degradation proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida)-like. Phenylacetic acid degradation (PAD) proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida) are putative aromatic ring cleavage enzymes of the aerobic PA catabolic pathway. PaaZ mutants were defective for growth with PA as a sole carbon source due to interruption of the putative ring opening system. This CD is limited to bacterial monofunctional enzymes.
Probab=100.00 E-value=1.4e-61 Score=546.28 Aligned_cols=405 Identities=15% Similarity=0.128 Sum_probs=311.5
Q ss_pred HHHhcCCcceEEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhh
Q 005041 270 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 349 (717)
Q Consensus 270 ~~~~tg~~iGT~i~a~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~ 349 (717)
.+|++++..+++. ..|+++++++|++||+.|+++++++|.++|++++++|++|+++|+++++.|+|+++.+
T Consensus 70 ~~P~~~~l~~~~~---------~adv~~ai~aA~~A~~~W~~~~~~~R~~il~~~a~~l~~~~~ela~a~~~e~Gk~~~~ 140 (549)
T cd07127 70 VSPYGVELGVTYP---------QCDPDALLAAARAAMPGWRDAGARARAGVCLEILQRLNARSFEMAHAVMHTTGQAFMM 140 (549)
T ss_pred ECCCCCcEEEEEc---------hHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHCCCHHH
Confidence 4566666444432 2389999999999999999999999999999999999999999999999888766421
Q ss_pred chhHHHHHHhhcChhHHHHHHHHHHHHhccccc-ccccc---cccc-cCCCceEEEeecceeEEEEEcCC-Cch-hHHHH
Q 005041 350 GYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQIL---KRTE-LADGLILEKTSCPLGVLLIVFES-RPD-ALVQI 422 (717)
Q Consensus 350 g~~~a~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~---~~~~-~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~ 422 (717)
.. ++ ....+++..++.+++++..... .+... +... .+.......+++|+|||++|+|| ||. ..+.+
T Consensus 141 a~-qa------~~~~evd~a~e~~~~a~~~~~~~~~~~~w~~~~~~~~~l~~~k~~~~~P~GVv~vI~p~nfP~~~~~~~ 213 (549)
T cd07127 141 AF-QA------GGPHAQDRGLEAVAYAWREMSRIPPTAEWEKPQGKHDPLAMEKTFTVVPRGVALVIGCSTFPTWNGYPG 213 (549)
T ss_pred HH-hc------ccHHHHHHHHHHHHHHHHHHHhccccccccCCCCCcccccccceeEEecccEEEEEeCcCChHHHHHHH
Confidence 11 00 0001455555555554432211 11100 0000 00011113467999999999998 785 55789
Q ss_pred HHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC--CChhhhhhcCCCCccEEEeecCHHHHHHH
Q 005041 423 ASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS--REEIPDLLKLDDVIDLVIPRGSNKLVSQI 499 (717)
Q Consensus 423 ~~~ALaaGN~vVlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~--~~~~~~~l~~~~~v~~v~fTGs~~~g~~i 499 (717)
+++||++||+||+|||+.+|+++.++.+++.++|.++ ||+|+||+|++ ++++++.|..||+|++|.||||+++|+.|
T Consensus 214 i~~ALaaGN~VVvKPs~~a~ls~~~~~~~i~~~l~eAGlP~gvv~~v~g~~~~~~~~~L~~~p~v~~I~FTGS~~~G~~i 293 (549)
T cd07127 214 LFASLATGNPVIVKPHPAAILPLAITVQVAREVLAEAGFDPNLVTLAADTPEEPIAQTLATRPEVRIIDFTGSNAFGDWL 293 (549)
T ss_pred HHHHHhcCCeEEEECCcccchhHHHHHHHHHHHHHHcCcCcccEEEEeCCCcHHHHHHHHhCCCCCEEEEECCHHHHHHH
Confidence 9999999999999999999999988887777777789 99999999985 35678888899999999999999999999
Q ss_pred HhhcC-CCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCc---------ccChhhHHHHHHHH
Q 005041 500 KESTK-IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKD---------LACNGALNELVVEL 568 (717)
Q Consensus 500 ~~~a~-~p~~lElGGk~p~iV~~dADl~~A~~~i~~~~~~n~g-~C~a~~rv~V~~~---------i~d~~f~~~l~~~~ 568 (717)
++.+. +|+++|||||||+||++|||++.|++.+++|+|.|+| .|++++|+|||++ +| |+|+++|++++
T Consensus 294 ~~~a~~~~v~~ElGGkn~~IV~~dADl~~aa~~i~~~~f~~sGQ~C~a~~ri~V~~s~i~~~~g~~i~-d~f~~~L~~~~ 372 (549)
T cd07127 294 EANARQAQVYTEKAGVNTVVVDSTDDLKAMLRNLAFSLSLYSGQMCTTPQNIYVPRDGIQTDDGRKSF-DEVAADLAAAI 372 (549)
T ss_pred HHHhccCcEEEecCCcCeEEECCCCCHHHHHHHHHHHHHccCCCCCCCCCEEEEECCccccccchhHH-HHHHHHHHHHH
Confidence 98874 8999999999999999999999999999999999987 9999999999999 89 79999999998
Q ss_pred HHcC-----------------------------ceEecCccc-----cc-cc--c-C-----CCCccccccccCceEEEE
Q 005041 569 QHEG-----------------------------VGLFGGPRA-----SK-LL--Q-I-----PETRLFHHEYNSMVCTVE 605 (717)
Q Consensus 569 ~~~~-----------------------------~~~~g~~~~-----~~-~~--p-i-----~~~~~~~eE~FGPVl~v~ 605 (717)
+++. .-+.|+... .+ ++ | | ++|++++||+||||++|+
T Consensus 373 ~~l~Gdp~~~~~~~Gpli~~~~~~ri~~a~~~g~vl~gg~~~~~~~~~g~~~~~Ptvl~~~~~d~~i~~eE~FGPVl~V~ 452 (549)
T cd07127 373 DGLLADPARAAALLGAIQSPDTLARIAEARQLGEVLLASEAVAHPEFPDARVRTPLLLKLDASDEAAYAEERFGPIAFVV 452 (549)
T ss_pred HHhcCCccccccccCCcCCHHHHHHHHHHHhCCCEEEcCCcCCCcCCCCceEEeCEEEEeCCCCCHHHcCCCcCceEEEE
Confidence 8751 001233221 12 23 6 2 368999999999999999
Q ss_pred EeCCHHHHHHHHHhcC--C-CceeEEEecCHHHHHHHHhc-CCee-eEEEcCCCCCCCC--CccCCccccccccCccccc
Q 005041 606 IVDDVRAAIDHIHQHG--S-AHTDCIVAEDQKVAETFLCQ-VDSA-AVFHNASTRFCDG--ARFGLGAEVGISTSRIHAR 678 (717)
Q Consensus 606 ~~~~~deAi~~aN~~~--~-GL~a~I~t~d~~~a~~~~~~-l~~G-~v~iN~~~~~~~~--~pfG~g~~~G~~~~~~~~~ 678 (717)
+|+|.||||+++|++. | ||++||||+|.++++++.++ .++| +++||........ .|||+.+.||... ..+
T Consensus 453 ~~~d~~eai~~an~~~~~~ggLt~sVfs~D~~~~~~~~~~~~~~~~~~~iN~tg~v~~~q~~~Fg~~~~sg~n~---~a~ 529 (549)
T cd07127 453 ATDSTDHSIELARESVREHGAMTVGVYSTDPEVVERVQEAALDAGVALSINLTGGVFVNQSAAFSDFHGTGANP---AAN 529 (549)
T ss_pred EeCCHHHHHHHHHhcccCCCCceEEEEcCCHHHHHHHHHHHHHhcCcEEEcCCceEEEecCcCCCCCCCCCCCc---ccc
Confidence 9999999999999984 5 69999999999999999998 7777 9999943333333 4599888776642 123
Q ss_pred ccchhhcccEEEEEEe
Q 005041 679 GPVGVEGLLTTRWILR 694 (717)
Q Consensus 679 g~~g~~~ft~~k~v~~ 694 (717)
.....-.|...|-.++
T Consensus 530 ~~~~~~~fv~~r~~~~ 545 (549)
T cd07127 530 AALTDGAFVANRFRVV 545 (549)
T ss_pred cccchhhhhhcceEEE
Confidence 4455556666654444
No 126
>cd07078 ALDH NAD(P)+ dependent aldehyde dehydrogenase family. The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer
Probab=100.00 E-value=1e-60 Score=534.97 Aligned_cols=375 Identities=21% Similarity=0.260 Sum_probs=315.6
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhhchhHHHHHHhhcChhHHHHHHHHHHH
Q 005041 296 REMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRI 375 (717)
Q Consensus 296 ~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~g~~~a~~~~~~~~~~~i~~~~~~~~~ 375 (717)
++++++|++||+.|++++.++|.++|+++++.|.++.++|+++++.|++++.+ +. ..++..+++.+++
T Consensus 1 ~~av~~a~~a~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~etG~~~~----~~--------~~ei~~~i~~l~~ 68 (432)
T cd07078 1 DAAVAAARAAFKAWAALPPAERAAILRKLADLLEERREELAALETLETGKPIE----EA--------LGEVARAADTFRY 68 (432)
T ss_pred CHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH----HH--------HHHHHHHHHHHHH
Confidence 36889999999999999999999999999999999999999999887765322 11 2345555555555
Q ss_pred Hhcccccc-cccccccccCCCceEEEeecceeEEEEEcCC-Cch-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHH
Q 005041 376 LADMEEPI-GQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVI 452 (717)
Q Consensus 376 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~~~ 452 (717)
++...+.. +.... ....+...+.+++|+|||++|+|| +|. ..++.+++||++||+||+|||+.+|.++..+.+++
T Consensus 69 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~AL~aGN~vilkps~~~~~~~~~l~~~l 146 (432)
T cd07078 69 YAGLARRLHGEVIP--SPDPGELAIVRREPLGVVGAITPWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALLLAELL 146 (432)
T ss_pred HHHHHHHhcCcccc--ccCCCceEEEEEeecceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHH
Confidence 44332221 11111 112344567889999999999997 685 57799999999999999999999999999999999
Q ss_pred HHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHhhcC---CCEEEecCCcceEEEcCCCCHHH
Q 005041 453 TSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK---IPVLGHADGICHVYVDKSANLDV 527 (717)
Q Consensus 453 ~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a~---~p~~lElGGk~p~iV~~dADl~~ 527 (717)
++ + +|+|+++++++ .++.+..|..|+++|.|.||||+.+|+.|++.+. +|+++|+|||+|+||++|||++.
T Consensus 147 ~~----ag~p~~~~~~~~~~~~~~~~~l~~~~~i~~v~ftGs~~~~~~v~~~a~~~~~~~~~e~gg~~~~iV~~~ad~~~ 222 (432)
T cd07078 147 AE----AGLPPGVLNVVTGDGDEVGAALASHPRVDKISFTGSTAVGKAIMRAAAENLKRVTLELGGKSPLIVFDDADLDA 222 (432)
T ss_pred HH----cCCCcCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhccCcEEEecCCCCeeEECCCCCHHH
Confidence 87 7 89999999996 4446777778999999999999999999988774 89999999999999999999999
Q ss_pred HHHHHHhhccCCCc-cccccceEEEcCcccChhhHHHHHHHHHHcCc---------------------------------
Q 005041 528 AKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV--------------------------------- 573 (717)
Q Consensus 528 A~~~i~~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~--------------------------------- 573 (717)
|++.+++++|.|+| .|++++++|||++++ ++|+++|+++++++..
T Consensus 223 aa~~i~~~~~~~~Gq~C~a~~~i~v~~~~~-~~~~~~L~~~l~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g 301 (432)
T cd07078 223 AVKGAVFGAFGNAGQVCTAASRLLVHESIY-DEFVERLVERVKALKVGNPLDPDTDMGPLISAAQLDRVLAYIEDAKAEG 301 (432)
T ss_pred HHHHHHHHHHhccCCCccCCceEEEcHHHH-HHHHHHHHHHHHccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCC
Confidence 99999999999987 999999999999999 7999999999886531
Q ss_pred -eE-ecCcccc---c-cc-c-C-----CCCccccccccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEecCHHHHHHHH
Q 005041 574 -GL-FGGPRAS---K-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFL 640 (717)
Q Consensus 574 -~~-~g~~~~~---~-~~-p-i-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~I~t~d~~~a~~~~ 640 (717)
++ +|++... + ++ | | +++++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.+++++
T Consensus 302 ~~~~~gg~~~~~~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~~l~~~i~t~d~~~~~~~~ 381 (432)
T cd07078 302 AKLLCGGKRLEGGKGYFVPPTVLTDVDPDMPIAQEEIFGPVLPVIPFKDEEEAIELANDTEYGLAAGVFTRDLERALRVA 381 (432)
T ss_pred CEEEeCCccCCCCCCcEEccEEEecCCCCChhhhCCCcCceEEEEEeCCHHHHHHHHhCCCcCceEEEECCCHHHHHHHH
Confidence 12 2333221 2 33 5 2 34789999999999999999999999999999999999999999999999999
Q ss_pred hcCCeeeEEEcCCCCC-CCCCccCCccccccccCcccccccchhhcccEEEEEE
Q 005041 641 CQVDSAAVFHNASTRF-CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 693 (717)
Q Consensus 641 ~~l~~G~v~iN~~~~~-~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v~ 693 (717)
+++++|.|+||++... .+..||||.+.||+| +++|++|+++|++.|++.
T Consensus 382 ~~~~~g~v~iN~~~~~~~~~~pfgG~~~sg~g----~~~g~~~~~~~~~~k~v~ 431 (432)
T cd07078 382 ERLEAGTVWINDYSVGAEPSAPFGGVKQSGIG----REGGPYGLEEYTEPKTVT 431 (432)
T ss_pred HhcCcceEEECCCCCCCCCCCCcCCcCcCcCC----ccchHHHHHHhhceEEEE
Confidence 9999999999998777 778999999999885 357999999999999875
No 127
>cd06534 ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase superfamily. The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydri
Probab=100.00 E-value=4.6e-59 Score=510.52 Aligned_cols=355 Identities=22% Similarity=0.252 Sum_probs=302.7
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhhchhHHHHHHhhcChhHHHHHHHHHHHHhccc
Q 005041 301 AARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRILADME 380 (717)
Q Consensus 301 ~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~g~~~a~~~~~~~~~~~i~~~~~~~~~~~~~~ 380 (717)
+|++||++|++++.++|.++|+++++.|.++.++|+++++.|++++.. ++ ..|+...++.+++++...
T Consensus 2 ~a~~a~~~w~~~~~~~R~~~l~~l~~~l~~~~~~l~~~~~~e~Gk~~~----~~--------~~ev~~~~~~l~~~~~~~ 69 (367)
T cd06534 2 AARAAFKAWAALPPAERAAILRKIADLLEERREELAALETLETGKPIE----EA--------LGEVARAIDTFRYAAGLA 69 (367)
T ss_pred hHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHH----HH--------HHHHHHHHHHHHHHHHHH
Confidence 689999999999999999999999999999999999998887765422 11 235555666666555333
Q ss_pred ccc-cccccccccCCCceEEEeecceeEEEEEcCC-Cchh-HHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcc
Q 005041 381 EPI-GQILKRTELADGLILEKTSCPLGVLLIVFES-RPDA-LVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIP 457 (717)
Q Consensus 381 ~~~-~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~~-~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~~~~~al~ 457 (717)
+.. +...+ ....+...+.+++|+|||++|.|| +|.+ .++++++||++||+||+|||+.+|.++..+++++.+
T Consensus 70 ~~~~~~~~~--~~~~~~~~~~~~~p~Gvv~~i~p~n~p~~~~~~~~~~aL~~GN~vilk~s~~~~~~~~~l~~~l~~--- 144 (367)
T cd06534 70 DKLGGPELP--SPDPGGEAYVRREPLGVVGVITPWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALALAELLQE--- 144 (367)
T ss_pred HHhcCCccc--ccCCCceeEEEEEeeeEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHh---
Confidence 211 11111 112345567889999999999998 5764 789999999999999999999999999999999987
Q ss_pred cc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHhhcC---CCEEEecCCcceEEEcCCCCHHHHHHHH
Q 005041 458 DT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK---IPVLGHADGICHVYVDKSANLDVAKNIV 532 (717)
Q Consensus 458 ~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a~---~p~~lElGGk~p~iV~~dADl~~A~~~i 532 (717)
+ +|+|+++++++ .++.++.|..|+++|.|+||||+++++.|.+.+. +|+++|+||+||+||++|||++.|++.+
T Consensus 145 -ag~p~~~v~~~~~~~~~~~~~l~~~~~vd~v~~tGs~~~~~~v~~~~~~~~~~~~~e~~g~~~~iV~~~ad~~~aa~~i 223 (367)
T cd06534 145 -AGLPPGVVNVVPGGGDEVGAALLSHPRVDKISFTGSTAVGKAIMKAAAENLKPVTLELGGKSPVIVDEDADLDAAVEGA 223 (367)
T ss_pred -cCCCcCeEEEEEcCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhcCCCeEEEEcCCCCeEEECCCCCHHHHHHHH
Confidence 7 89999999996 4446777878999999999999999999988764 8999999999999999999999999999
Q ss_pred HhhccCCCc-cccccceEEEcCcccChhhHHHHHHHHHHcCceEecCccccccccCCCCccccccccCceEEEEEeCCHH
Q 005041 533 IDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLQIPETRLFHHEYNSMVCTVEIVDDVR 611 (717)
Q Consensus 533 ~~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~~~~g~~~~~~~~pi~~~~~~~eE~FGPVl~v~~~~~~d 611 (717)
++++|.++| .|+++++||||++++ |+|+++|+ .++.+.. +++++++||+||||++|++|+|+|
T Consensus 224 ~~~~~~~~gq~C~s~~~v~v~~~~~-~~f~~~l~--------tl~~~~~-------~~~~~~~~E~fgPv~~v~~~~~~~ 287 (367)
T cd06534 224 VFGAFFNAGQICTAASRLLVHESIY-DEFVEKLV--------TVLVDVD-------PDMPIAQEEIFGPVLPVIRFKDEE 287 (367)
T ss_pred HHHHHhcCCCCCCCCcEEEEcHHHH-HHHHHhhc--------eeeeCCC-------CCCccccCCccCceEEEEecCCHH
Confidence 999999977 999999999999999 79998887 2221100 245689999999999999999999
Q ss_pred HHHHHHHhcCCCceeEEEecCHHHHHHHHhcCCeeeEEEcCCCCC-CCCCccCCccccccccCcccccccchhhcccEEE
Q 005041 612 AAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRF-CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTR 690 (717)
Q Consensus 612 eAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~v~iN~~~~~-~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k 690 (717)
|||+++|++++||++||||+|.+.++++++++++|.|+||+++.. .+..||||.++||+|. ++|++++++||+.|
T Consensus 288 eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgg~~~sG~g~----~~g~~~~~~~~~~k 363 (367)
T cd06534 288 EAIALANDTEYGLTAGVFTRDLNRALRVAERLRAGTVYINDSSIGVGPEAPFGGVKNSGIGR----EGGPYGLEEYTRTK 363 (367)
T ss_pred HHHHHHhCCCCCCeEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCcccCccCC----CChHHHHHHhceEE
Confidence 999999999999999999999999999999999999999998877 7788999999999863 36899999999999
Q ss_pred EEE
Q 005041 691 WIL 693 (717)
Q Consensus 691 ~v~ 693 (717)
++.
T Consensus 364 ~i~ 366 (367)
T cd06534 364 TVV 366 (367)
T ss_pred EEe
Confidence 874
No 128
>COG0014 ProA Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism]
Probab=100.00 E-value=8.6e-58 Score=473.55 Aligned_cols=408 Identities=43% Similarity=0.733 Sum_probs=390.5
Q ss_pred hhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhhchhHHHHHHhhcChhHHHHHHHH
Q 005041 293 VGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKS 372 (717)
Q Consensus 293 ~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~g~~~a~~~~~~~~~~~i~~~~~~ 372 (717)
.++.+..++|++|+...+.++.++|.+.|.++|+.|+++.++|.+++.+|+..++++|+++++++|+.++..+++.+++.
T Consensus 3 ~~~~~~~~~Ak~A~~~La~~st~~Kn~aL~a~A~~L~~~~~~IL~AN~~Dl~~are~gl~~~m~DRL~L~~~Ri~~ma~g 82 (417)
T COG0014 3 SELEELGKRAKAASRKLATLSTEEKNRALLAMADALEAARAEILAANAKDLAAARENGLSEAMLDRLALTPSRIEAMADG 82 (417)
T ss_pred hHHHHHHHHHHHHHHHHhhcChhhHHHHHHHHHHHHHHhHHHHHHhhHHHHHHHHHcCCcHHHHHHHcCCHHHHHHHHHH
Confidence 46778889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcccccccccccccccCCCceEEEeecceeEEEEEcCCCchhHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHH
Q 005041 373 IRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVI 452 (717)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~~P~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~~~ 452 (717)
++..+.+++|+|+....+..++|...+.+|.|+||+++|+...|++++...+.||++||+||+|.+..+-.|...|.+++
T Consensus 83 l~~Va~L~DPvGev~~~~~~~nGL~i~~~rvPLGVigvIYEsRPnVtvdaaaLclKsGNAvILRGGsea~~Sn~ai~~~i 162 (417)
T COG0014 83 LRQVAALPDPVGEVIDGWTLPNGLQIYRVRVPLGVIGVIYESRPNVTVDAAALCLKSGNAVILRGGSEAIHSNAAIVEVI 162 (417)
T ss_pred HHHHhcCCCchHhhhccccCCCCCEEEEEEccceEEEEEEecCCccHHHHHHHHHhcCCEEEEeCcHHHhhhHHHHHHHH
Confidence 99999999999998877777899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcccc-cCcCceEEec--CCChhhhhhcCCCCccEEEeecCHHHHHHHHhhcCCCEEEecCCcceEEEcCCCCHHHHH
Q 005041 453 TSAIPDT-VGEKLIGLVT--SREEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAK 529 (717)
Q Consensus 453 ~~al~~a-lP~gvv~vv~--~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a~~p~~lElGGk~p~iV~~dADl~~A~ 529 (717)
+++|+++ +|++.||+|+ +.+.+.++|..+..||+|...||....+.|.+.+..||+..+-|++++||+++||+|+|.
T Consensus 163 ~~aL~~~~lP~~aVqli~~~~R~~v~~ll~l~~yiD~iIPRGg~~Li~~v~~~a~vPVi~~~~G~CHiyvd~~ADld~A~ 242 (417)
T COG0014 163 QEALEKAGLPADAVQLIEDTDREEVLELLRLDGYIDLVIPRGGAGLIRRVVENATVPVIEHGVGNCHIYVDESADLDKAL 242 (417)
T ss_pred HHHHHHcCCCHHHhhhccCCCHHHHHHHHhhcCceeEEEcCCcHHHHHHHHhCCcCCEEecCcceEEEEecccCCHHHHH
Confidence 9999999 9999999998 478899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhccCCCccccccceEEEcCcccChhhHHHHHHHHHHcCceEecCcccccccc-C---CCCccccccccCceEEEE
Q 005041 530 NIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLQ-I---PETRLFHHEYNSMVCTVE 605 (717)
Q Consensus 530 ~~i~~~~~~n~g~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~~~~g~~~~~~~~p-i---~~~~~~~eE~FGPVl~v~ 605 (717)
+.++++|......|++.+.++||+.+. ++|+.+|.+.+...|+++.|++....++| . .+...|..|+..++++|.
T Consensus 243 ~ii~nAKtqrPs~CNA~EtLLVh~~ia-~~fLp~l~~~l~~~gvelr~d~~~~~~~~~~~~~A~e~Dw~tEyLd~ilavk 321 (417)
T COG0014 243 KIIVNAKTQRPSVCNAAETLLVHRAIA-KSFLPKLANALQEAGVELRGDAEALALLPDAVKPATEEDWDTEYLDLILAVK 321 (417)
T ss_pred HHHHcccCCCCcccchHHHHHcCHHHH-HHhHHHHHHHHHhcCeEEEcCHHHHHhccccCCCCchhhHHHHhhhheeEEE
Confidence 999999999999999999999999999 89999999999999999998876666665 2 356789999999999999
Q ss_pred EeCCHHHHHHHHHhcCCCceeEEEecCHHHHHHHHhcCCeeeEEEcCCCCCCCCCccCCccccccccCcccccccchhhc
Q 005041 606 IVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEG 685 (717)
Q Consensus 606 ~~~~~deAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ 685 (717)
.++++||||+.+|.++.+||-+|.|+|...+++|.+++++-.||||.+++|.++..||+|.+.|+|+++.|.+||.|+++
T Consensus 322 vVd~ld~AI~HIn~y~S~HsdaIiTe~~~~a~~F~~~VDSAaVyvNASTRFtDG~~fG~GaEiGISTqKlHARGPmGLe~ 401 (417)
T COG0014 322 VVDSLDEAIAHINTYGSGHSDAIITEDYANAERFVNEVDSAAVYVNASTRFTDGGQFGLGAEIGISTQKLHARGPMGLEA 401 (417)
T ss_pred EeCCHHHHHHHHHHhCCCCCcceeeCCHHHHHHHHhhcchheEEEecccccccCccccCceEEEeecCcccCCCCCChhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccEEEEEEecCceeec
Q 005041 686 LLTTRWILRGNGHVVD 701 (717)
Q Consensus 686 ft~~k~v~~~~~~~~~ 701 (717)
+|..|++..+.+|.|+
T Consensus 402 LTs~Kyiv~G~Gqvr~ 417 (417)
T COG0014 402 LTSYKYIVRGDGQVRP 417 (417)
T ss_pred hcceeEEEeCCceecC
Confidence 9999999999999874
No 129
>KOG2452 consensus Formyltetrahydrofolate dehydrogenase [Nucleotide transport and metabolism]
Probab=100.00 E-value=6.5e-57 Score=465.80 Aligned_cols=379 Identities=15% Similarity=0.182 Sum_probs=308.6
Q ss_pred HHhcCCcceEEEecCCcccccHhhHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHh
Q 005041 271 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSR--RLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 348 (717)
Q Consensus 271 ~~~tg~~iGT~i~a~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~ 348 (717)
+|.+++.++.+..+. -.||++|+++|+.||. +|+++|.++|.+.|.++|+++++|.+||+.+...|-+..
T Consensus 443 np~~~~~ic~~~la~------v~dvd~av~aak~afe~g~w~~~sar~rg~~~y~la~lme~h~eelat~e~ldagav-- 514 (881)
T KOG2452|consen 443 NPTDGSVICQVSLAQ------VTDVDKAVAAAKGAFENGRWGKISARDRGRLMYRLADLMEQHQEELATIEALDAGAV-- 514 (881)
T ss_pred CCCCCCeeEEeehhH------hhhHHHHHHHHhhhhhcCcccccchhhhhhhhhhccchhhhccchhhhhhhccccce--
Confidence 344555555555555 6799999999999998 599999999999999999999999999998776654332
Q ss_pred hchhHHHHHHhhcChhHHHHHHHHHHHHhccccc-cccccccc-ccCCCceEEEeecceeEEEEEcCC-Cch-hHHHHHH
Q 005041 349 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRT-ELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIAS 424 (717)
Q Consensus 349 ~g~~~a~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~ 424 (717)
++-++. ..+...++..|+++++.+. .|.++|.. .+++...+.++++|+|||++|+|| ||+ ++.|+.+
T Consensus 515 --ytlalk-------thvgmsi~~~ryfagwcdkiqg~tipi~~arpn~nl~lt~~epigv~g~i~pwnyplmmlswk~a 585 (881)
T KOG2452|consen 515 --YTLALK-------THVGMSIQTFRYFAGWCDKIQGSTIPINQARPNRNLTLTRKEPVGVCGIIIPWNYPLMMLSWKTA 585 (881)
T ss_pred --eeeeeh-------hhcCceehHHHHhhhhhhhccCceeccccCCCCCcceeeecCcceeEEEeccCCchHHHHHHHHH
Confidence 111111 1334455666777766654 35554422 123445678899999999999999 785 5669999
Q ss_pred HHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccccCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHHHHhhc
Q 005041 425 LAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDTVGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST 503 (717)
Q Consensus 425 ~ALaaGN~vVlKps~~tp~t~~~l~~~~~~al~~alP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a 503 (717)
.+|++- + ..++++ .||+|+|+| ++.+|+-|..||+|++|-||||+++|+.||++|
T Consensus 586 aclaa~---~-----------~k~~e~----------sgvini~~gsgslvg~rls~hpdvrkigftgsteig~~im~sc 641 (881)
T KOG2452|consen 586 ACLAAQ---V-----------LKFAEL----------TGVVNVLPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSC 641 (881)
T ss_pred HHHHHH---H-----------hhhhhh----------cceEEEecCCcchhccccccCCccceeccccchHHHHHHHHHH
Confidence 888862 1 122332 489999995 788999999999999999999999999999998
Q ss_pred C----CCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccChhhHHHHHHHHHHcCce----
Q 005041 504 K----IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGVG---- 574 (717)
Q Consensus 504 ~----~p~~lElGGk~p~iV~~dADl~~A~~~i~~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~~---- 574 (717)
. |++.|||||++|+|++.||||++|++..+.+.|+|-| .|++.-|+||.+||+ |+|+++++++.+++.+.
T Consensus 642 a~snikkvslelgg~sp~iifad~dl~kav~~~~~~vff~kgenciaagr~fi~~sih-d~fv~~~vee~~~~~ig~pld 720 (881)
T KOG2452|consen 642 AISNVKKVSLELGGESPFIIFADCDLNKAVQMGMSSVFFSKGENCIAAGRLFVEDSIH-DEFVRRVVEEVRKMKVGNPLD 720 (881)
T ss_pred hhcchheeeeeccCCCceEEEecCcHHHHHHhhccceeecCCcchhhhcceeehhhhh-HHHHHHHHHHHHhhccCCccc
Confidence 4 8999999999999999999999999999999999998 999999999999999 79999999999987431
Q ss_pred ------------------------------E-ecCccc--cc-cc-c-C-----CCCccccccccCceEEEEEeC--CHH
Q 005041 575 ------------------------------L-FGGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVD--DVR 611 (717)
Q Consensus 575 ------------------------------~-~g~~~~--~~-~~-p-i-----~~~~~~~eE~FGPVl~v~~~~--~~d 611 (717)
+ +|+.+. .+ || | | ..|-+..||.||||++|.+|+ |+|
T Consensus 721 r~t~hgpqnh~ahl~kl~ey~~~~v~~ga~~~~gg~~~~r~g~~f~pti~s~i~d~~f~a~eesfgpim~is~f~d~d~~ 800 (881)
T KOG2452|consen 721 RDTDHGPQNHHAHLVKLMEYCQHGVKEGATLVCGGNQVPRPGFFFEPTVFTDVEDHMFIAKEESFGPVMIISRFADGDLD 800 (881)
T ss_pred ccccCCchhHHHHHHHHHHHHHHHhccCcEEEECCccCCCCCcccCCeeecccchhhhhhhccccCceEEEEecCCCCHH
Confidence 1 233322 12 34 3 3 246778999999999999996 688
Q ss_pred HHHHHHHhcCCCceeEEEecCHHHHHHHHhcCCeeeEEEcCCCCCCCCCccCCccccccccCcccccccchhhcccEEEE
Q 005041 612 AAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRW 691 (717)
Q Consensus 612 eAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~ 691 (717)
+.++.+|+|+|||+++|||+|..++.++++.+.+|.|+||.....+...||||.++||+|- ..|...+.+|..+|+
T Consensus 801 ~vl~ran~tefgla~gvftrd~~k~l~v~~~l~agtvfvnty~ktdvaapfggfkqsgfgk----d~ge~alneyl~~kt 876 (881)
T KOG2452|consen 801 AVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFVNTYNKTDVAAPFGGFKQSGFGK----DLGEAALNEYLRVKT 876 (881)
T ss_pred HHHhhccccccccccceeecccchhhhhhhhhccceEEEeeccccccccCCCCcccccccc----chhHHHHhhheeeEE
Confidence 9999999999999999999999999999999999999999988777889999999999862 358899999999999
Q ss_pred EEec
Q 005041 692 ILRG 695 (717)
Q Consensus 692 v~~~ 695 (717)
|.+.
T Consensus 877 it~e 880 (881)
T KOG2452|consen 877 VTFE 880 (881)
T ss_pred EEee
Confidence 9874
No 130
>COG4230 Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion]
Probab=100.00 E-value=1.1e-54 Score=459.08 Aligned_cols=388 Identities=19% Similarity=0.215 Sum_probs=326.4
Q ss_pred CcchHHHHhcC-CcceEEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
Q 005041 265 AMDSIIKVLEG-KRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADV 343 (717)
Q Consensus 265 ~~~~l~~~~tg-~~iGT~i~a~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~ 343 (717)
.+..+.+|.+. +..|++..++ ++|+++|++.|.+|++.|+.+|+.+|+.+|++++++++.+..+|..++.+|-
T Consensus 127 ~~~pV~nPad~~dvVG~V~ea~------~~~v~~A~~~A~~a~p~W~atp~~eRAaiL~raAdlme~~m~~L~~L~~REA 200 (769)
T COG4230 127 EPRPVINPADPDDIVGTVTEAT------EADVEQALEAAVAAAPIWSATPPAERAAILERAADLMEAQMPQLMGLLVREA 200 (769)
T ss_pred CcccccCCCCHhHCeeeeeecC------HHHHHHHHHHHHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 44556667664 4679998888 8999999999999999999999999999999999999999999999888776
Q ss_pred HHHHhhchhHHHHHHhhcChhHHHHHHHHHHHHhccccc-ccccccccccCCCceEEEeecceeEEEEEcCC-Cchh-HH
Q 005041 344 AAAQEAGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPDA-LV 420 (717)
Q Consensus 344 ~~~~~~g~~~a~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~~-~~ 420 (717)
||... . .+.|++++++.||||+...+. .+ + ..+.|+|+|.+|+|| ||+- ..
T Consensus 201 GKtl~----n--------aIAEVREAVDFlrYYA~~ar~~~g----------~----~~~~~~G~vVcISPWNFPLAIFt 254 (769)
T COG4230 201 GKTLS----N--------AIAEVREAVDFLRYYAGQARDTFG----------N----LTHRPLGPVVCISPWNFPLAIFT 254 (769)
T ss_pred ccchh----h--------HHHHHHHHHHHHHHHHHHHhcccC----------c----cccCCCCcEEEECCCCchHHHHH
Confidence 55432 2 245899999999999975432 11 1 246899999999999 6864 44
Q ss_pred HHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CChhhhhhcCCCCccEEEeecCHHHHHH
Q 005041 421 QIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQ 498 (717)
Q Consensus 421 ~~~~~ALaaGN~vVlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~ 498 (717)
..++.||++||+|+-||+|+||+.+..-.+++++ + +|++++|+++| ++++|+.|+.|++++.|.|||||+++|.
T Consensus 255 GqiaAAL~aGN~VlAKPAEqTpLIAa~aV~ll~e----AGvP~~~lqLLpG~G~tvGa~L~~darv~GV~FTGSTevA~l 330 (769)
T COG4230 255 GQIAAALAAGNSVLAKPAEQTPLIAAQAVRLLHE----AGVPPGVLQLLPGRGETVGAALTADARVAGVMFTGSTEVARL 330 (769)
T ss_pred hHHHHHHHcCCccccCccccccHHHHHHHHHHHH----cCCChhhHHhcCCCCcccchhhhcCcccceEEEeCcHHHHHH
Confidence 6899999999999999999999999999999997 7 99999999996 6779999999999999999999999999
Q ss_pred HHhhc----C--CCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccChhhHHHHHHHHHHc
Q 005041 499 IKEST----K--IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHE 571 (717)
Q Consensus 499 i~~~a----~--~p~~lElGGk~p~iV~~dADl~~A~~~i~~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~ 571 (717)
|.++- + .|++.|.||-|+||||.+|--|+++..++.|+|..+| +|++..-+++++++. |..++.|+-+|.++
T Consensus 331 i~~~LA~r~g~~~pLIAETGGqNAMIVDSsAL~EQVv~Dvl~SAFdSAGQRCSALRvLclQ~DvA-d~~l~mLKGAm~el 409 (769)
T COG4230 331 IQRQLAKRQGRPIPLIAETGGQNAMIVDSSALAEQVVADVLASAFDSAGQRCSALRVLCLQEDVA-DRILTMLKGAMAEL 409 (769)
T ss_pred HHHHHhhcCCCCCceEeccCCcceEEeechhhHHHHHHHHHHHHhhcccchhhhhhhhhhhhhHH-HHHHHHHHHHHHHh
Confidence 96553 2 7999999999999999999999999999999999987 999999999999999 79999999999887
Q ss_pred CceE-------ecC----c----------------c-----------ccc-cc-c-C---CCCccccccccCceEEEEEe
Q 005041 572 GVGL-------FGG----P----------------R-----------ASK-LL-Q-I---PETRLFHHEYNSMVCTVEIV 607 (717)
Q Consensus 572 ~~~~-------~g~----~----------------~-----------~~~-~~-p-i---~~~~~~~eE~FGPVl~v~~~ 607 (717)
.+.- +|. + + ..+ |+ | + +.-..++.|+|||||.|++|
T Consensus 410 ~~G~p~~l~tDVGPVIdaEAk~~i~~Hi~~mr~~gr~v~q~~~~~~~q~GtFv~Ptl~El~~~~eL~rEVFGPVLHVvRy 489 (769)
T COG4230 410 RVGNPDRLTTDVGPVIDAEAKANIEKHIQTMRSKGRLVHQAAAPNSLQKGTFVAPTLIELENLDELQREVFGPVLHVVRY 489 (769)
T ss_pred ccCCccceeccccccccHHHHHHHHHHHHHHHhcccchhhccCCCccCCceeeCceeEEcCCHHHHHHHhccceeEEEEe
Confidence 4310 000 0 0 001 22 2 1 23345789999999999999
Q ss_pred C--CHHHHHHHHHhcCCCceeEEEecCHHHHHHHHhcCCeeeEEEcCCCCC--CCCCccCCccccccccCcccccccchh
Q 005041 608 D--DVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRF--CDGARFGLGAEVGISTSRIHARGPVGV 683 (717)
Q Consensus 608 ~--~~deAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~v~iN~~~~~--~~~~pfG~g~~~G~~~~~~~~~g~~g~ 683 (717)
+ ++|+.|+.+|.++|||+.+|||+-.+.+.++.+++++|++|||..... ....||||-+-||.| ...+|+..+
T Consensus 490 ~~~~l~~vi~~INatGyGLT~GvHtRideti~~v~~~~~aGNlYVNRN~vGAVVGVQPFGG~GLSGTG---PKAGGp~YL 566 (769)
T COG4230 490 KRDELDEVIDQINATGYGLTLGVHTRIDETIAHVTERAHAGNLYVNRNIVGAVVGVQPFGGEGLSGTG---PKAGGPLYL 566 (769)
T ss_pred cHHHHHHHHHHHhccCcceeeeeecchHHHHHHHHhhccccceEeeccceeeEEeeccCCCCCCCCCC---CCCCChHHH
Confidence 5 899999999999999999999999999999999999999999986643 356799987777664 246789999
Q ss_pred hcccEEEEE
Q 005041 684 EGLLTTRWI 692 (717)
Q Consensus 684 ~~ft~~k~v 692 (717)
..|+..+..
T Consensus 567 ~Rl~~~~p~ 575 (769)
T COG4230 567 LRLVSERPW 575 (769)
T ss_pred HHHHhcCCc
Confidence 888876653
No 131
>KOG4165 consensus Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism]
Probab=100.00 E-value=2.3e-49 Score=395.65 Aligned_cols=422 Identities=63% Similarity=0.969 Sum_probs=387.1
Q ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhhchhHHHHHHhhcChhHHHHHHHHHH
Q 005041 295 AREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIR 374 (717)
Q Consensus 295 v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~g~~~a~~~~~~~~~~~i~~~~~~~~ 374 (717)
+++..+.||++++..+.++.++|.++|.+++++|+.++.+|.+++.+|+..+++.|+.++++.|+..+...+..+...++
T Consensus 2 ~e~~a~~aR~a~r~LqaLs~e~R~~il~~iad~L~~~~~~I~~aN~~Dla~Ake~GL~~sll~RL~l~~~K~~sl~~g~~ 81 (433)
T KOG4165|consen 2 VEEMAENAREAGRILQALSNEDRADILHHIADLLVDNEKEILAANKKDLAEAKEAGLAESLLKRLDLSPGKISSLAAGLR 81 (433)
T ss_pred HHHHHHHHHHHhhHHHhcChhhHHHHHHHHHHHHHhhHHHHHhcchhhHHHHHhcCccHHHHHHhcCChHHHHHHHHHHH
Confidence 35566789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcccccccccccccccCCCceEEEeecceeEEEEEcCCCchhHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHH
Q 005041 375 ILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITS 454 (717)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~~P~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~~~~~ 454 (717)
..+...+++|+.........+...+.+..|+||.++|+...|-.+....+.|+++||.+++|....+..+...+.+++++
T Consensus 82 ~ia~~edpvGRVl~~~~ladgL~L~qvt~PiGvLLVIFESRPd~l~qiasLAi~SgN~llLKGGkEa~~Sn~~L~~~v~~ 161 (433)
T KOG4165|consen 82 QIAELEDPVGRVLKKTRLADGLELEQVTVPIGVLLVIFESRPDCLPQIASLAIASGNGLLLKGGKEAAHSNAALHKLVQE 161 (433)
T ss_pred HHHhcccchhhheeeeeccCCceEEEeeccceEEEEEeccCchHHHHHHHHHHhcCCeEeecCchhhhhhHHHHHHHHHH
Confidence 99998899998654333456777788899999999999999987777788899999999999999999999999999999
Q ss_pred hcccc-cCcCceEEecCCChhhhhhcCCCCccEEEeecCHHHHHHHHhhcCCCEEEecCCcceEEEcCCCCHHHHHHHHH
Q 005041 455 AIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVI 533 (717)
Q Consensus 455 al~~a-lP~gvv~vv~~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a~~p~~lElGGk~p~iV~~dADl~~A~~~i~ 533 (717)
|+.+. .|.+.+|+|+..+++.++|..+..||+|...||+...|.|...+.+||+..--|-+.+||++|||+++|.+.+.
T Consensus 162 al~~~~~~~~aV~LV~sREev~dLl~ld~~IDLvIPRGSs~LVr~Ik~~tkIPVLGHA~GichvYvd~dad~~kA~riv~ 241 (433)
T KOG4165|consen 162 ALGTHGGPGKAVQLVTSREEVSDLLKLDDYIDLVIPRGSSDLVRSIKDTTKIPVLGHAEGICHVYVDKDADLDKAKRIVR 241 (433)
T ss_pred HhhhccCchhhhhheecHHHHHHHhhhhhheeEEecCCcHHHHHHHhhcccCcccccccceeEEEeccccCHHHHHHHHh
Confidence 99888 89999999999999999999999999999999999999998888899999999999999999999999999999
Q ss_pred hhccCCCccccccceEEEcCcccChhhHHHHHHHHHHcCceEecCccccccccC--CCCccccccccCceEEEEEeCCHH
Q 005041 534 DAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLQI--PETRLFHHEYNSMVCTVEIVDDVR 611 (717)
Q Consensus 534 ~~~~~n~g~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~~~~g~~~~~~~~pi--~~~~~~~eE~FGPVl~v~~~~~~d 611 (717)
.++....-.|+|.+.++||++..-..|.+.+...++..|++++++++...+..+ |...-|+.|+-.-.++|-.+++.+
T Consensus 242 DaK~dYPAaCNAmETLLIh~dl~~~~~~~~l~~~l~~~gVtl~agpkl~~~l~~~p~e~~s~~~Ey~~l~~~ievV~~v~ 321 (433)
T KOG4165|consen 242 DAKCDYPAACNAMETLLIHKDLEQSPFFDDLINMLKEEGVTLHAGPKLAALLKFSPPEAKSFNTEYGSLECTIEVVDSVQ 321 (433)
T ss_pred cccCCCchhhhhHHHHhccHhhhhcchHHHHHHHHHhcCeEEecChhHHhhcCcCCchhhhhhhhhcchheeeeecccHH
Confidence 999988889999999999998431589999999999999999988865433223 345678889888899999999999
Q ss_pred HHHHHHHhcCCCceeEEEecCHHHHHHHHhcCCeeeEEEcCCCCCCCCCccCCccccccccCcccccccchhhcccEEEE
Q 005041 612 AAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRW 691 (717)
Q Consensus 612 eAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~ 691 (717)
+||+.+|.++.+|+-+|.|+|.+.|++|.+.+++..|++|.++++.+++.||+|.+.|+|+++.|.+||.|++.++++||
T Consensus 322 ~Ai~HI~~hgS~HTD~IvTe~~~~Ae~Fl~~VDSa~vf~NASTRFaDGfRfGlGaEVGIST~rIHARGPvGveGLlttkw 401 (433)
T KOG4165|consen 322 SAIDHIHTHGSSHTDCIVTENEATAEHFLKHVDSACVFHNASTRFADGFRFGLGAEVGISTSRIHARGPVGVEGLLTTKW 401 (433)
T ss_pred HHHHHHHhcCCcccceEEecCHHHHHHHHhccchhheeecccccccccccccccceeeeeccceeccCCccccceeeeee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCceeec---CCCCceeeeccccCC
Q 005041 692 ILRGNGHVVD---GDQGVVYTHKNLALQ 716 (717)
Q Consensus 692 v~~~~~~~~~---~~~~~~~~~~~~~~~ 716 (717)
+..+.+|... .+++.+|+|+++|++
T Consensus 402 ~lRG~gqvvsd~~~~G~~~y~H~~l~i~ 429 (433)
T KOG4165|consen 402 LLRGKGQVVSDFNEGGKRAYLHEDLPID 429 (433)
T ss_pred EEecCCceeccccCCCceeeeecCCChh
Confidence 9999999773 577999999999986
No 132
>KOG2453 consensus Aldehyde dehydrogenase [Energy production and conversion]
Probab=100.00 E-value=7.1e-51 Score=406.31 Aligned_cols=410 Identities=16% Similarity=0.192 Sum_probs=336.3
Q ss_pred HHhcCCcceEEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhhc
Q 005041 271 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAG 350 (717)
Q Consensus 271 ~~~tg~~iGT~i~a~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~g 350 (717)
+|.+++.+..+..++ -+|.+.+++.|++|++.|...|...|.++.+++.|.|+...+-|.++...|+++-...|
T Consensus 39 ~pann~pia~v~~as------v~dye~~~k~a~ea~kiw~~vpapkrgeivrqigdalr~klq~lg~lvslemgkilaeg 112 (507)
T KOG2453|consen 39 APANNSPIANVQNAS------VQDYEIAIKEAKEAYKIWCEVPAPKRGEIVRQIGDALRTKLQNLGKLVSLEMGKILAEG 112 (507)
T ss_pred cCCCCChhHHHhhcc------HHHHHHHHHHHHHHHHHHhcCCCCccchHHHHHHHHHHHHHHHHhhhhhhhhhhHhhhc
Confidence 345666677766666 78999999999999999999999999999999999999999999999888887654323
Q ss_pred hhHHHHHHhhcChhHHHHHHHHHHHHhcccccc-cccccccccCCCceEEEeecceeEEEEEcCC-Cch-hHHHHHHHHH
Q 005041 351 YAKSLVSRLALKPGKISSLAKSIRILADMEEPI-GQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAI 427 (717)
Q Consensus 351 ~~~a~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~AL 427 (717)
..|+++.++.+.+..++.+.+ |...|. . .++.....++.|+|+|++|+.+ ||. .--|.-+.|+
T Consensus 113 ------------vgevqeyvdicdyavglsr~l~g~i~ps-e-rpghalleqwnplg~vgvitafnfpcavygwnnaiaM 178 (507)
T KOG2453|consen 113 ------------VGEVQEYVDICDYAVGLSRSLEGKIFPS-E-RPGHALLEQWNPLGVVGVITAFNFPCAVYGWNNAIAM 178 (507)
T ss_pred ------------chhHHHHHHHHHHhhhhhhhhCCcccCC-C-CCchhHHHhcCCcceEEEEEeccCCceeeccCchhhh
Confidence 346777888888776766654 444443 2 2444456689999999999986 785 3447777799
Q ss_pred HhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecCCChhhhhhcCCCCccEEEeecCHHHHHHHHhhc---
Q 005041 428 RSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST--- 503 (717)
Q Consensus 428 aaGN~vVlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a--- 503 (717)
.+||+|++||++.+|+++....+++.+.|.+. +|++......|..+.+..+..+.+++.++||||+++||.+.+.-
T Consensus 179 v~gncVvWKpApttpLtTiAvtklIaevL~qnnl~~aicsltcG~aDigrAaakdgRvnlvsftGssQvgKsvgq~vqar 258 (507)
T KOG2453|consen 179 VCGNCVVWKPAPTTPLTTIAVTKLIAEVLEQNNLPGAICSLTCGGADIGRAAAKDGRVNLVSFTGSSQVGKSVGQQVQAR 258 (507)
T ss_pred hhcceeEecCCCCcceeHHHHHHHHHHHHhccCCCcceeeecccchhhhhhccccCceeecccccchhhhhHHHHHHHHH
Confidence 99999999999999999999999999999988 99999888888778889999999999999999999999997654
Q ss_pred CCCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccChhhHHHHHHHHHHcCce-------E
Q 005041 504 KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGVG-------L 575 (717)
Q Consensus 504 ~~p~~lElGGk~p~iV~~dADl~~A~~~i~~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~~-------~ 575 (717)
.-+.+|||||||+.||++||||..++...++++...+| +|+...|++||+++| |+.+++|+++.++..+. +
T Consensus 259 fgk~llelggnnaiiv~edadl~lvvps~lfaavgtagqrctt~rrl~~hesvy-d~vlerlkkayaq~~ignpld~ntl 337 (507)
T KOG2453|consen 259 FGKLLLELGGNNAIIVNEDADLNLVVPSTLFAAVGTAGQRCTTTRRLIVHESVY-DQVLERLKKAYAQFEIGNPLDSNTL 337 (507)
T ss_pred hhhHHHhhcCCceEEEeccccceeeehHHHHHHhcccccchhhhhHHHhhHHHH-HHHHHHHHHHHHheecCCcCCCCce
Confidence 36788999999999999999999999999999999987 999999999999999 79999999888765321 0
Q ss_pred ----------------------------ecCc---cccccc-c-C----CCCccccccccCceEEEEEeCCHHHHHHHHH
Q 005041 576 ----------------------------FGGP---RASKLL-Q-I----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIH 618 (717)
Q Consensus 576 ----------------------------~g~~---~~~~~~-p-i----~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN 618 (717)
.|+. +...|+ | | .+.++..+|.|.|||.|.+|++++|||.+-|
T Consensus 338 ~gplht~qav~~f~~~veeak~~ggki~yggkv~er~gnfveptivtl~hda~vv~~etfapilyvlkf~~~eea~ainn 417 (507)
T KOG2453|consen 338 IGPLHTQQAVGKFKASVEEAKASGGKIEYGGKVLERDGNFVEPTIVTLKHDAPVVLRETFAPILYVLKFSTLEEAIAINN 417 (507)
T ss_pred eccccCHHHHHHHHHHHHHHHhcCCeEEECCEeeccCCCcccceEEEecCCcchhhhhhccceeeEEeccchhhhheecc
Confidence 1221 111222 4 2 3567899999999999999999999999999
Q ss_pred hcCCCceeEEEecCHHHHHHHHh--cCCeeeEEEcCCCCCC-CCCccCCccccccccCcccccccchhhcccEEEEEEec
Q 005041 619 QHGSAHTDCIVAEDQKVAETFLC--QVDSAAVFHNASTRFC-DGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRG 695 (717)
Q Consensus 619 ~~~~GL~a~I~t~d~~~a~~~~~--~l~~G~v~iN~~~~~~-~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v~~~ 695 (717)
..+.||++||||+|+.++.|+.- .-++|.|.||.++... -+..|||-++.|- +++.|.+.-++|.+..+-.++
T Consensus 418 ev~qglsssift~n~~nifrw~gpkgsdcgivnvniptsgaeiggafggek~tgg----gresgsdswkqymrrstctin 493 (507)
T KOG2453|consen 418 EVDQGLSSSIFTTNIQNIFRWMGPKGSDCGIVNVNIPTSGAEIGGAFGGEKETGG----GRESGSDSWKQYMRRSTCTIN 493 (507)
T ss_pred ccccccchhhhhcCHHHHHhhhCCCCCccceEEecCCCCchhhcccccCccccCC----CcccCchHHHHHHhhceeeee
Confidence 99999999999999999999885 7899999999988643 3456877666543 346788899999988887777
Q ss_pred CceeecCCCC
Q 005041 696 NGHVVDGDQG 705 (717)
Q Consensus 696 ~~~~~~~~~~ 705 (717)
++..-|--|+
T Consensus 494 yskelplaqg 503 (507)
T KOG2453|consen 494 YSKELPLAQG 503 (507)
T ss_pred ccccCchhhc
Confidence 7654443333
No 133
>KOG2455 consensus Delta-1-pyrroline-5-carboxylate dehydrogenase [Amino acid transport and metabolism]
Probab=100.00 E-value=2.5e-45 Score=378.88 Aligned_cols=380 Identities=17% Similarity=0.179 Sum_probs=293.6
Q ss_pred HhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH-HCHHHHHHHHHHHHHHHHhhchhHHHHHHhhcChhHHHHHH
Q 005041 292 QVGAREMAVAARESSRRLQALQSQDRRKILLDVADALE-ANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLA 370 (717)
Q Consensus 292 ~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~-~~~~el~~~~~~d~~~~~~~g~~~a~~~~~~~~~~~i~~~~ 370 (717)
..+|++||++|.+|++.|...|..+|.++++|.|+++. +.+-+|..... ++.+|. ..++. ++-+.+.+
T Consensus 95 ~k~ie~AIkaAl~a~~~W~~~PiadR~aI~lkAAdlistkyr~~l~aatM--lgqgKt--~~qAe-------iDa~~eLi 163 (561)
T KOG2455|consen 95 KKQIEKAIKAALSAQKTWELVPIADRLAIFLKAADLISTKYRYDLLAATM--LGQGKT--AIQAE-------IDAAAELI 163 (561)
T ss_pred HHHHHHHHHHHHhhcCccccCcHHHHHHHHHHHHHHhcchHHHHHHHHHH--hcCCcc--hHHHH-------HHHHHHHH
Confidence 88999999999999999999999999999999999998 66655554322 233332 12221 12244555
Q ss_pred HHHHHHhcccccccccccccccCCCceEEEeecce-eEEEEEcCCCch-hHH-HHHHHHHHhCCEEEEeCCcchHHHHHH
Q 005041 371 KSIRILADMEEPIGQILKRTELADGLILEKTSCPL-GVLLIVFESRPD-ALV-QIASLAIRSGNGLLLKGGKEAMRSNAI 447 (717)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl-GVV~~I~p~~P~-~~~-~~~~~ALaaGN~vVlKps~~tp~t~~~ 447 (717)
+.+|..+..+..+-...|.. ...+......++|+ |-|++|+||+.. +.. -..+|||+ ||+|++|||..+.+++++
T Consensus 164 df~R~na~ya~eL~~~qpi~-~~~~t~ns~~yRpleGFVaAisPFnftAI~gnLa~aPaLM-GN~VLwkPS~ta~lssYi 241 (561)
T KOG2455|consen 164 DFFRFNAKYASELYAQQPIS-QTKGTWNSMEYRPLEGFVAAISPFNFTAIGGNLAGAPALM-GNVVLWKPSDTAALSSYI 241 (561)
T ss_pred HHHHHhHHHHHHhhhcCCcc-ccCCCCcceeeccccceeEEecccceeeeccccccChhhh-cceeeecccchhHHHHHH
Confidence 66665443221110011111 12334445678899 999999998653 333 34566665 999999999999999999
Q ss_pred HHHHHHHhcccc-cCcCceEEec-CCChhhhhhcCCCCccEEEeecCHHHHHHHHhhc---------CCCEEEecCCcce
Q 005041 448 LHKVITSAIPDT-VGEKLIGLVT-SREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST---------KIPVLGHADGICH 516 (717)
Q Consensus 448 l~~~~~~al~~a-lP~gvv~vv~-~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a---------~~p~~lElGGk~p 516 (717)
+-++++| | +|+|++|.|+ ++...++.+..+|.+..+.||||+.+=|.+...- .-+++.|.||||-
T Consensus 242 i~~il~E----AGlP~GvinFvPad~~~f~dtita~~hfaglnftgS~~~fk~lwk~V~~n~~~Y~~fPrlvgEcgGkNF 317 (561)
T KOG2455|consen 242 IYRILRE----AGLPPGVINFVPADGPLFGDTITASPHFAGLNFTGSVPTFKHLWKKVGENVDNYRTFPRLVGECGGKNF 317 (561)
T ss_pred HHHHHHH----cCCCccceeeccCCCCeecceeccCcccceeeeecccHHHHHHHHHHHhhhhhhhcchhhhccCCCcce
Confidence 9999997 7 9999999999 5777888888999999999999999988886543 2578899999999
Q ss_pred EEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccChhhHHHHHHHHHHcCce---------------------
Q 005041 517 VYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGVG--------------------- 574 (717)
Q Consensus 517 ~iV~~dADl~~A~~~i~~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~~--------------------- 574 (717)
-+|+++||++.++...++|+|-.+| .|+|.+|+||++++. +.+.++|++.-+++.+.
T Consensus 318 HfVH~SA~VesvV~~TvrsAfey~GQkcsA~SRmYvp~s~w-p~i~e~l~~~~~q~~igd~~~d~~~f~gavIh~~sF~r 396 (561)
T KOG2455|consen 318 HFVHASADVESVVSSTVRSAFEYQGQKCSACSRMYVPESLW-PQIREELVEEHSQLKIGDPVIDFSTFIGAVIHDKSFAR 396 (561)
T ss_pred EEeccccchHHHHHHHHHHHHhhcccccchhhhcccchhhc-HHHHHHHHHHHhhcccCCccccccchhhhhccHHHHHH
Confidence 9999999999999999999998876 999999999999999 89889998776665321
Q ss_pred ----------------EecCcc--ccccc--c-C-----CCCccccccccCceEEEEEeC--CHHHHHHHH-HhcCCCce
Q 005041 575 ----------------LFGGPR--ASKLL--Q-I-----PETRLFHHEYNSMVCTVEIVD--DVRAAIDHI-HQHGSAHT 625 (717)
Q Consensus 575 ----------------~~g~~~--~~~~~--p-i-----~~~~~~~eE~FGPVl~v~~~~--~~deAi~~a-N~~~~GL~ 625 (717)
+.||.- ..++| | | |.+++|.||+|||||+|+.|+ +++|+++++ |.|+|||+
T Consensus 397 l~k~le~ak~~~~leiL~GGk~DdS~G~FV~PTiv~~kdP~~pim~ee~fGPvLsVyvY~Dd~~~E~l~lv~~tt~YaLT 476 (561)
T KOG2455|consen 397 LKKVLEHAKKDPELEILAGGKCDDSTGYFVEPTIVLSKDPKDPIMTEEIFGPVLSVYVYEDDKFDEVLKLVDNTTPYALT 476 (561)
T ss_pred HHHHHHhhccCccceeeecCcccCCCCeeecceEEEccCCCcchhhhhccCceeEEEEeccccHHHHHHHHhcCCcceec
Confidence 123321 12444 6 2 468999999999999999996 589999997 67899999
Q ss_pred eEEEecCHHHHHHHHhc--CCeeeEEEcCCCCC--CCCCccCCccccccccCcccccccchhhcccEEEEE
Q 005041 626 DCIVAEDQKVAETFLCQ--VDSAAVFHNASTRF--CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWI 692 (717)
Q Consensus 626 a~I~t~d~~~a~~~~~~--l~~G~v~iN~~~~~--~~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v 692 (717)
.+||++|.+...+..++ ..+|+.|||+-++. ....||||.+.||... ..+|++-+..|+.+++|
T Consensus 477 GaiFaqd~~vv~~a~~~Lr~aAgNfYiNdKcTGsvvgqqpFGGaR~SGTND---KaGgp~~l~RwtSp~~i 544 (561)
T KOG2455|consen 477 GAIFAQDREVVLHALDVLRMAAGNFYINDKCTGSVVGQQPFGGARLSGTND---KAGGPHYLLRWTSPLSI 544 (561)
T ss_pred cccccccHHHHHHHHHHHHhhhcceEEccccccceeeccccCcccccCCCC---CCCCceEEEeecCcchh
Confidence 99999999999888874 56999999996654 3568999999998753 34577777777776654
No 134
>COG0263 ProB Glutamate 5-kinase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.2e-42 Score=356.72 Aligned_cols=256 Identities=43% Similarity=0.668 Sum_probs=233.2
Q ss_pred hccCCeEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChhHhhHHHHhhhhccCCCcccccCccccc
Q 005041 13 LKNVKRVVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNEL 92 (717)
Q Consensus 13 ~~~~~~iVvKiGGs~l~~~~~~~~~~~l~~l~~~Ia~l~~~G~~vviVhGGg~~~~~~~l~~~~~~~~~~~~l~~~~~~l 92 (717)
+++.+++|||||.|++++.++.++...+..++++|+.|+++|+++|||.||+...|...++... ++..+.
T Consensus 3 ~~~~~riVvKiGSs~Lt~~~g~l~~~~l~~l~~~ia~L~~~G~eVilVSSGAiaaG~~~Lg~~~----rp~~l~------ 72 (369)
T COG0263 3 LSSARRIVVKIGSSSLTDGTGGLDRSKLEELVRQVAALHKAGHEVVLVSSGAIAAGRTRLGLPK----RPKTLA------ 72 (369)
T ss_pred CCcceEEEEEECcceeeCCCCCcCHHHHHHHHHHHHHHHhCCCEEEEEccchhhhChhhcCCCC----CCcchH------
Confidence 6778999999999999999888999999999999999999999999999999999998775443 333444
Q ss_pred hHHHHHHhchHHHHHHHHHHhhcCCCCcceeEecccccCchhHhhHHHHHHHHHHhCCCeEEecCCCeeeccCCCCCCCC
Q 005041 93 DGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSS 172 (717)
Q Consensus 93 ~~~~~~a~G~~~~~~~~~~~l~~~g~~~~~~~~~~~d~~~~~~~~~~~~~i~~lL~~g~vPVv~g~d~v~~~~~~~~~~~ 172 (717)
.+|+++++||..+|..|+..|..+|+..+|+++|.+|+.++.+|.|...+++.||+.|+|||||+||.+++ ++
T Consensus 73 ~kQA~AAVGQ~~Lm~~y~~~f~~~g~~v~QiLLTr~D~~~r~ry~Nar~Tl~~Ll~~gvVPIINENDtva~-------~E 145 (369)
T COG0263 73 EKQAAAAVGQVRLMQLYEELFARYGIKVGQILLTRDDFSDRRRYLNARNTLSALLELGVVPIINENDTVAT-------EE 145 (369)
T ss_pred HHHHHHHhCHHHHHHHHHHHHHhcCCeeeEEEeehhhhhhHHHHHHHHHHHHHHHHCCceeeecCCCceee-------ee
Confidence 35699999999999999999999999999999999999999999999999999999999999999999998 56
Q ss_pred CeeecchHHHHHHHhhcCCCEEEEecccCccccCCC-ccccccccccccccc-hhHHHhcCCCCCcccCChHHHHHHHHH
Q 005041 173 GIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPP-SEPNSKLIHTYIRAK-HQAEITFGDKSRVGRGGMTAKVNAAYC 250 (717)
Q Consensus 173 ~~~~~sD~~A~~lA~~L~Ad~li~lTDV~GV~~~dP-~~p~a~~i~~it~~e-~~~~~~~gs~~~~~tggM~~Kv~aa~~ 250 (717)
.+|+|+|++++.+|..++||.|+++||+||+|++|| ++|++++|++++.-. -.+.+..|+.+..+||||.+|++||..
T Consensus 146 ikfGDND~LsA~VA~lv~ADlLvlLsDiDGLyd~nPr~~pdAk~i~~V~~it~ei~~~aggsgs~~GTGGM~TKl~AA~i 225 (369)
T COG0263 146 IKFGDNDTLSALVAILVGADLLVLLSDIDGLYDANPRTNPDAKLIPEVEEITPEIEAMAGGSGSELGTGGMRTKLEAAKI 225 (369)
T ss_pred eeecCCchHHHHHHHHhCCCEEEEEEccCcccCCCCCCCCCCeeehhhcccCHHHHHHhcCCCCCCCcccHHHHHHHHHH
Confidence 688999999999999999999999999999999999 599999999987433 223455677888999999999999999
Q ss_pred HHHcCCcEEEEeCCCcchHHHHhcCCcceEEEecC
Q 005041 251 AACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRD 285 (717)
Q Consensus 251 a~~~gi~v~I~~g~~~~~l~~~~tg~~iGT~i~a~ 285 (717)
|.++|++++|++|..++.+.+.+.++..||++.+.
T Consensus 226 A~~aG~~~iI~~g~~~~~i~~~~~~~~~GT~F~~~ 260 (369)
T COG0263 226 ATRAGVPVIIASGSKPDVILDALEGEAVGTLFEPQ 260 (369)
T ss_pred HHHcCCcEEEecCCCcchHHHHHhCCCCccEEecC
Confidence 99999999999999999999999999999999876
No 135
>KOG1154 consensus Gamma-glutamyl kinase [Amino acid transport and metabolism]
Probab=100.00 E-value=9.3e-42 Score=327.77 Aligned_cols=274 Identities=56% Similarity=0.829 Sum_probs=242.4
Q ss_pred HHhhccCCeEEEEeCCcccccCCC-cccHHHHHHHHHHHHHHHHCCCeEEEEecChhHhhHHHHhhhhccCCCcccccCc
Q 005041 10 RDFLKNVKRVVVKVGTAVVTRSDG-RLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKP 88 (717)
Q Consensus 10 ~~~~~~~~~iVvKiGGs~l~~~~~-~~~~~~l~~l~~~Ia~l~~~G~~vviVhGGg~~~~~~~l~~~~~~~~~~~~l~~~ 88 (717)
|.++++.+++|||+|.+++++++. .+.+.++..++.++++|++.|++++||.+|+..+|++.+........++++.-..
T Consensus 3 r~~~kka~rIVVKLGSavit~e~~~~laLgrla~IVEqV~~L~~~G~evilVSSGaVA~G~qrLr~~~~~s~s~r~~l~~ 82 (285)
T KOG1154|consen 3 RAFLKKAYRIVVKLGSAVITREDTCGLALGRLASIVEQVSELQRMGREVILVSSGAVAFGRQRLRQELLPSSSMRQTLKP 82 (285)
T ss_pred chhhccceEEEEEecceEEECCCCccchHHHHHHHHHHHHHHHhcCceEEEEecchhhhhHHHhhhhhccchhHHHhhCC
Confidence 667888899999999999999976 4778889999999999999999999999999999998877665555566663333
Q ss_pred c-ccchHHHHHHhchHHHHHHHHHHhhcCCCCcceeEecccccCchhHhhHHHHHHHHHHhCCCeEEecCCCeeeccCCC
Q 005041 89 Q-NELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAP 167 (717)
Q Consensus 89 ~-~~l~~~~~~a~G~~~~~~~~~~~l~~~g~~~~~~~~~~~d~~~~~~~~~~~~~i~~lL~~g~vPVv~g~d~v~~~~~~ 167 (717)
+ +.+.+++++++||.++|++|+.+|.++|+..+|+++|+.||.+...|.|...+|.+||..|+|||++.||++++..++
T Consensus 83 ~~~l~e~rA~AAvGQ~~Lmalye~lF~Qy~~~iAQvLvT~~Di~d~~~r~Nl~~Ti~eLL~m~viPIvNeNDavs~~~~~ 162 (285)
T KOG1154|consen 83 QSELAEKRACAAVGQSGLMALYETLFTQYGITIAQVLVTRNDILDEQQRKNLQNTISELLSMNVIPIVNENDAVSPREIP 162 (285)
T ss_pred ccchhhHHHHHHhCcchHHHHHHHHHHHhccchheeeecCcchhhHHHHHHHHHHHHHHHhCCceeeecCCCccCCcccc
Confidence 3 334567999999999999999999999999999999999999999999989999999999999999999999986554
Q ss_pred CCCCCCeeecchHHHHHHHhhcCCCEEEEecccCccccCCCccccccccccccccchhHHHhcCCCCCcccCChHHHHHH
Q 005041 168 YEDSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNA 247 (717)
Q Consensus 168 ~~~~~~~~~~sD~~A~~lA~~L~Ad~li~lTDV~GV~~~dP~~p~a~~i~~it~~e~~~~~~~gs~~~~~tggM~~Kv~a 247 (717)
+.+. -++|++|+.+|..++||.||++|||||+|+.+|.....++|+..++.+......+|+++..+||||..||.|
T Consensus 163 ~~D~----~dNDsLsA~laaei~ADlLilLsDVdglYt~PPd~~~~~li~~~~~~~~~v~~tfG~~SkvGtGGM~tKv~A 238 (285)
T KOG1154|consen 163 FGDS----SDNDSLAAILAAEIKADLLILLSDVDGLYTGPPDADPSKLIHTFSPGDPQVSTTFGSKSKVGTGGMETKVKA 238 (285)
T ss_pred cCCC----CcccHHHHHHHHHhccCEEEEEecccccccCCCCCCcceeeeeeccCCCCCccccCccCccCcCcchhhHHH
Confidence 4322 269999999999999999999999999999877666678999999988876678899999999999999999
Q ss_pred HHHHHHcCCcEEEEeCCCcchHHHHhcCCcceEEEecCCc
Q 005041 248 AYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRDAH 287 (717)
Q Consensus 248 a~~a~~~gi~v~I~~g~~~~~l~~~~tg~~iGT~i~a~~~ 287 (717)
|..|+.+|++|+|++|..|..+.+++.+...||.+....+
T Consensus 239 A~~A~~~Gv~viI~~g~~p~~I~~iv~g~kvgt~f~~~~~ 278 (285)
T KOG1154|consen 239 AVNALNAGVSVIITNGDAPENITDIVEGKKVGTFFEQLKR 278 (285)
T ss_pred HHHHhcCCceEEEeCCCChHHHHHHHhhhhhhhhhhhccc
Confidence 9999999999999999999999999999999998876533
No 136
>cd04256 AAK_P5CS_ProBA AAK_P5CS_ProBA: Glutamate-5-kinase (G5K) domain of the bifunctional delta 1-pyrroline-5-carboxylate synthetase (P5CS), composed of an N-terminal G5K (ProB) and a C-terminal glutamyl 5- phosphate reductase (G5PR, ProA), the first and second enzyme catalyzing proline (and, in mammals, ornithine) biosynthesis. G5K transfers the terminal phosphoryl group of ATP to the gamma-carboxyl group of glutamate, and is subject to feedback allosteric inhibition by proline or ornithine. In plants, proline plays an important role as an osmoprotectant and, in mammals, ornithine biosynthesis is crucial for proper ammonia detoxification, since a G5K mutation has been shown to cause human hyperammonaemia.
Probab=100.00 E-value=6e-41 Score=350.15 Aligned_cols=270 Identities=59% Similarity=0.849 Sum_probs=228.1
Q ss_pred hhccCCeEEEEeCCcccccCCC-cccHHHHHHHHHHHHHHHHCCCeEEEEecChhHhhHHHHhhhhccCC-------Ccc
Q 005041 12 FLKNVKRVVVKVGTAVVTRSDG-RLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNS-------SLA 83 (717)
Q Consensus 12 ~~~~~~~iVvKiGGs~l~~~~~-~~~~~~l~~l~~~Ia~l~~~G~~vviVhGGg~~~~~~~l~~~~~~~~-------~~~ 83 (717)
.|...+++|||+|||+++++++ .++.+.+..++++|+.|++.|+++|||.||+.++|+..++.+..... ++.
T Consensus 4 ~~~~~~~iVvKiGss~lt~~~~~~~~~~~l~~l~~~i~~l~~~g~~vilVssGAv~~G~~~l~~~~~~~~~~~~~~~g~~ 83 (284)
T cd04256 4 ELKHAKRIVVKLGSAVVTREDECGLALGRLASIVEQVSELQSQGREVILVTSGAVAFGKQRLRHEILLSSSMRQTLKSGQ 83 (284)
T ss_pred hhccCCEEEEEeCchhccCCCCCccCHHHHHHHHHHHHHHHHCCCEEEEEeeCcHHhChHHhhhccccccchhhhccccc
Confidence 3666789999999999999876 79999999999999999999999999999999999988765432110 111
Q ss_pred cccCccccchHHHHHHhchHHHHHHHHHHhhcCCCCcceeEecccccCchhHhhHHHHHHHHHHhCCCeEEecCCCeeec
Q 005041 84 DLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVST 163 (717)
Q Consensus 84 ~l~~~~~~l~~~~~~a~G~~~~~~~~~~~l~~~g~~~~~~~~~~~d~~~~~~~~~~~~~i~~lL~~g~vPVv~g~d~v~~ 163 (717)
..+.....+.+++++++||..++.+|+..|..+++.++|+++|.+||.++..+.+..+.++.+|+.|+|||+++||++.+
T Consensus 84 ~~~~~~~~~~~qa~aa~gq~~L~~~y~~~f~~~~~~~~q~llt~~d~~~~~~~~~~~~~l~~lL~~g~iPVi~~nD~v~~ 163 (284)
T cd04256 84 LKDMPQMELDGRACAAVGQSGLMALYEAMFTQYGITVAQVLVTKPDFYDEQTRRNLNGTLEELLRLNIIPIINTNDAVSP 163 (284)
T ss_pred ccCCcchhHHHHHHHHcccHHHHHHHHHHHHHcCCcHHHeeeeccccccHHHHHHHHHHHHHHHHCCCEEEEeCCCcccc
Confidence 12222234568899999999999999999999999999999999999998888888899999999999999999999886
Q ss_pred cCCCCCCCCC--eeecchHHHHHHHhhcCCCEEEEecccCccccCCCccccccccccccccchhHHHhcCCCCCcccCCh
Q 005041 164 RKAPYEDSSG--IFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGM 241 (717)
Q Consensus 164 ~~~~~~~~~~--~~~~sD~~A~~lA~~L~Ad~li~lTDV~GV~~~dP~~p~a~~i~~it~~e~~~~~~~gs~~~~~tggM 241 (717)
......+..+ .++|+|++|+.+|.+++||+|+|+|||||||++||++|++++|++++.++..+. ..++.+..+||||
T Consensus 164 ~~~~~~~~~~~~~i~d~D~lAa~lA~~l~Ad~Li~lTDVdGVy~~dP~~~~a~~I~~i~~~~~~~~-~~~~~s~~gtGGM 242 (284)
T cd04256 164 PPEPDEDLQGVISIKDNDSLAARLAVELKADLLILLSDVDGLYDGPPGSDDAKLIHTFYPGDQQSI-TFGTKSRVGTGGM 242 (284)
T ss_pred cccccccccccccccChHHHHHHHHHHcCCCEEEEEeCCCeeecCCCCCCCCeEcccccHhHHHHh-hcccccCcccCCc
Confidence 3211111111 349999999999999999999999999999999998899999999998776543 3344456789999
Q ss_pred HHHHHHHHHHHHcCCcEEEEeCCCcchHHHHhcCCcceEEE
Q 005041 242 TAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLF 282 (717)
Q Consensus 242 ~~Kv~aa~~a~~~gi~v~I~~g~~~~~l~~~~tg~~iGT~i 282 (717)
.+|+++|..+.++|++++|+||..|+.+.+.+.|+..||++
T Consensus 243 ~~Kl~Aa~~a~~~Gi~v~I~~G~~~~~i~~~l~G~~~GT~~ 283 (284)
T cd04256 243 EAKVKAALWALQGGTSVVITNGMAGDVITKILEGKKVGTFF 283 (284)
T ss_pred HHHHHHHHHHHHCCCeEEEEcCCCccHHHHHHcCCCCCEEe
Confidence 99999999999999999999999999999999999899986
No 137
>PRK12314 gamma-glutamyl kinase; Provisional
Probab=100.00 E-value=3e-40 Score=343.01 Aligned_cols=260 Identities=40% Similarity=0.646 Sum_probs=221.5
Q ss_pred HHhhccCCeEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChhHhhHHHHhhhhccCCCcccccCcc
Q 005041 10 RDFLKNVKRVVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQ 89 (717)
Q Consensus 10 ~~~~~~~~~iVvKiGGs~l~~~~~~~~~~~l~~l~~~Ia~l~~~G~~vviVhGGg~~~~~~~l~~~~~~~~~~~~l~~~~ 89 (717)
|+.++.++++|||||||++++++++++.+.+.+++++|+.++..|+++|||.+|+.++|+.+++.... +.++.
T Consensus 3 ~~~~~~~~~iViK~Ggs~l~~~~~~~~~~~i~~~~~~I~~~~~~g~~vvlV~Sga~~~g~~~l~~~~~----~~~~~--- 75 (266)
T PRK12314 3 RRQLENAKRIVIKVGSSTLSYENGKINLERIEQLVFVISDLMNKGKEVILVSSGAIGAGLTKLKLDKR----PTSLA--- 75 (266)
T ss_pred hhhHhhCCEEEEEeCCCeeeCCCCCcCHHHHHHHHHHHHHHHHCCCeEEEEeeCcccccceeeccccC----CCCHH---
Confidence 34466678999999999999888889999999999999999999999999988888899876654321 11111
Q ss_pred ccchHHHHHHhchHHHHHHHHHHhhcCCCCcceeEecccccCchhHhhHHHHHHHHHHhCCCeEEecCCCeeeccCCCCC
Q 005041 90 NELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYE 169 (717)
Q Consensus 90 ~~l~~~~~~a~G~~~~~~~~~~~l~~~g~~~~~~~~~~~d~~~~~~~~~~~~~i~~lL~~g~vPVv~g~d~v~~~~~~~~ 169 (717)
.+++++++||..++.+|...|..+|+.++|+++|++||.++..+.+..+.++++|++|+|||+++||.+...+
T Consensus 76 ---~~~a~aa~Gq~~l~~~~~~~~~~~g~~~~q~llT~~~~~~~~~~~~~~~~l~~ll~~g~IPVv~~nd~v~~~~---- 148 (266)
T PRK12314 76 ---EKQALAAVGQPELMSLYSKFFAEYGIVVAQILLTRDDFDSPKSRANVKNTFESLLELGILPIVNENDAVATDE---- 148 (266)
T ss_pred ---HHHHHHHHhHHHHHHHHHHHHHHcCCeEEEEEEecccccchHHHHHHHHHHHHHHHCCCEEEEcCCCCeeecc----
Confidence 2468999999999999999999999999999999999998888888889999999999999999999887632
Q ss_pred CCCCeeecchHHHHHHHhhcCCCEEEEecccCccccCCCc-cccccccccccc--cchhHHHhcCCCCCcccCChHHHHH
Q 005041 170 DSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIR--AKHQAEITFGDKSRVGRGGMTAKVN 246 (717)
Q Consensus 170 ~~~~~~~~sD~~A~~lA~~L~Ad~li~lTDV~GV~~~dP~-~p~a~~i~~it~--~e~~~~~~~gs~~~~~tggM~~Kv~ 246 (717)
.+..++++|++|+++|.+|+||+|+|+|||||||++||+ +|++++|++|+. ++..+. ..++.+.++||||++|++
T Consensus 149 -~~~~~~~~D~~Aa~lA~~l~Ad~liilTDVdGVy~~dP~~~~~a~~i~~I~~~~~~~~~~-~~~~~~~~~tGGM~~Kl~ 226 (266)
T PRK12314 149 -IDTKFGDNDRLSAIVAKLVKADLLIILSDIDGLYDKNPRINPDAKLRSEVTEITEEILAL-AGGAGSKFGTGGMVTKLK 226 (266)
T ss_pred -ccceecchHHHHHHHHHHhCCCEEEEEeCCCcccCCCCCCCCCCeEEEEecCCCHHHHHH-hccCCCCcccCchHHHHH
Confidence 223368899999999999999999999999999999995 899999999985 333322 233344578999999999
Q ss_pred HHHHHHHcCCcEEEEeCCCcchHHHHhcCCcceEEEecC
Q 005041 247 AAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRD 285 (717)
Q Consensus 247 aa~~a~~~gi~v~I~~g~~~~~l~~~~tg~~iGT~i~a~ 285 (717)
+|..+.++|++++|+||+.|+.+.+.+.|+..||++.+.
T Consensus 227 aa~~a~~~gv~v~I~~g~~~~~i~~~l~g~~~GT~i~~~ 265 (266)
T PRK12314 227 AAKFLMEAGIKMVLANGFNPSDILDFLEGESIGTLFAPK 265 (266)
T ss_pred HHHHHHHCCCeEEEEcCCCchHHHHHHcCCCCceEEccC
Confidence 999999999999999999999999999998899998653
No 138
>PRK13402 gamma-glutamyl kinase; Provisional
Probab=100.00 E-value=4.2e-39 Score=346.04 Aligned_cols=254 Identities=38% Similarity=0.562 Sum_probs=219.5
Q ss_pred hccCCeEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChhHhhHHHHhhhhccCCCcccccCccccc
Q 005041 13 LKNVKRVVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNEL 92 (717)
Q Consensus 13 ~~~~~~iVvKiGGs~l~~~~~~~~~~~l~~l~~~Ia~l~~~G~~vviVhGGg~~~~~~~l~~~~~~~~~~~~l~~~~~~l 92 (717)
|..++++||||||+++++.++.++.+.+.+++++|+.|++.|+++||||||++..|...++... ++ .+.
T Consensus 2 ~~~~kriVIKiGgs~L~~~~~~l~~~~i~~la~~I~~l~~~G~~vvlVsSGava~G~~~l~~~~----~~-~~~------ 70 (368)
T PRK13402 2 DSNWKRIVVKVGSSLLTPHHQGCSSHYLLGLVQQIVYLKDQGHQVVLVSSGAVAAGYHKLGFID----RP-SVP------ 70 (368)
T ss_pred CCCCcEEEEEEchhhccCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeCChhhcCccccCCCC----CC-Ccc------
Confidence 3456899999999999998778999999999999999999999999999999888874332111 11 111
Q ss_pred hHHHHHHhchHHHHHHHHHHhhcCCCCcceeEecccccCchhHhhHHHHHHHHHHhCCCeEEecCCCeeeccCCCCCCCC
Q 005041 93 DGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSS 172 (717)
Q Consensus 93 ~~~~~~a~G~~~~~~~~~~~l~~~g~~~~~~~~~~~d~~~~~~~~~~~~~i~~lL~~g~vPVv~g~d~v~~~~~~~~~~~ 172 (717)
.+++++++||..++.+|...|..+|+++.|+++|..|+.++.+|.+..+++.++|++|+|||+++||.+.+ .+
T Consensus 71 ~~qalaavGq~~l~~~~~~~f~~~g~~~aqvLlT~~d~~~~~~y~n~~~~l~~LL~~g~IPIinenD~v~~-------~e 143 (368)
T PRK13402 71 EKQAMAAAGQGLLMATWSKLFLSHGFPAAQLLLTHGDLRDRERYINIRNTINVLLERGILPIINENDAVTT-------DR 143 (368)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHCCCeEEEEEEecchhhhHHHHHHHHHHHHHHHHCCcEEEEeCCCcEee-------cc
Confidence 35799999999999999999999999999999999999877778777789999999999999999898775 34
Q ss_pred CeeecchHHHHHHHhhcCCCEEEEecccCccccCCC-ccccccccccccc--cchhHHHhcCCCCCcccCChHHHHHHHH
Q 005041 173 GIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPP-SEPNSKLIHTYIR--AKHQAEITFGDKSRVGRGGMTAKVNAAY 249 (717)
Q Consensus 173 ~~~~~sD~~A~~lA~~L~Ad~li~lTDV~GV~~~dP-~~p~a~~i~~it~--~e~~~~~~~gs~~~~~tggM~~Kv~aa~ 249 (717)
..++++|++|+.+|.+|+||.|+|+|||||||++|| .+|++++|++|+. +++.. +..++.+..+||||.+|+++|.
T Consensus 144 l~~GdnD~lAa~vA~~l~Ad~LiilTDVdGvy~~dP~~~p~a~~I~~I~~i~~e~~~-l~~~~~s~~gtGGM~~Kl~Aa~ 222 (368)
T PRK13402 144 LKVGDNDNLSAMVAALADADTLIILSDIDGLYDQNPRTNPDAKLIKQVTEINAEIYA-MAGGAGSNVGTGGMRTKIQAAK 222 (368)
T ss_pred cccCChHHHHHHHHHHhCCCEEEEEecCCeEEeCCCCCCCCCEEEEEeccCcHHHHH-HhcccccCcCcCCchHHHHHHH
Confidence 557999999999999999999999999999999999 5999999999986 44443 3334445688999999999999
Q ss_pred HHHHcCCcEEEEeCCCcchHHHHhcCCcceEEEecC
Q 005041 250 CAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRD 285 (717)
Q Consensus 250 ~a~~~gi~v~I~~g~~~~~l~~~~tg~~iGT~i~a~ 285 (717)
.|.++|++++|+|+..|+.+.+.+.|+..||++.+.
T Consensus 223 ~a~~~gi~v~I~~g~~~~~l~~~l~g~~~GT~i~~~ 258 (368)
T PRK13402 223 IAMSHGIETFIGNGFTADIFNQLLKGQNPGTYFTPE 258 (368)
T ss_pred HHHHcCCcEEEEcCCCchHHHHHhcCCCCceEEecC
Confidence 999999999999999999999999999999999876
No 139
>PTZ00489 glutamate 5-kinase; Provisional
Probab=100.00 E-value=5.2e-38 Score=323.66 Aligned_cols=252 Identities=34% Similarity=0.535 Sum_probs=213.2
Q ss_pred HhhccCCeEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChhHhhHHHHhhhhccCCCcccccCccc
Q 005041 11 DFLKNVKRVVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQN 90 (717)
Q Consensus 11 ~~~~~~~~iVvKiGGs~l~~~~~~~~~~~l~~l~~~Ia~l~~~G~~vviVhGGg~~~~~~~l~~~~~~~~~~~~l~~~~~ 90 (717)
..++..+++|||+|||++++++ .++..++..++++|+.|++ ++++||||||+...|...++..+ ..
T Consensus 3 ~~~~~~~riVIKlG~Svit~~~-~~~~~~~~~l~~~i~~l~~-~~~vilVssGava~g~~~~~~~~------------~~ 68 (264)
T PTZ00489 3 DILKSVKRIVVKVGSSILVDNQ-EIAAHRIEALCRFIADLQT-KYEVILVTSGAVAAGYTKKEMDK------------SY 68 (264)
T ss_pred hhhhcCCEEEEEeccceeeCCC-CcCHHHHHHHHHHHHHHhc-CCeEEEEecChHhcChhhcCCCc------------cc
Confidence 3455678899999999999864 6888889999999999987 79999999999877765432211 01
Q ss_pred cchHHHHHHhchHHHHHHHHHHhhcCCCCcceeEecccccCchhHhhHHHHHHHHHHhCCCeEEecCCCeeeccCCCCCC
Q 005041 91 ELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYED 170 (717)
Q Consensus 91 ~l~~~~~~a~G~~~~~~~~~~~l~~~g~~~~~~~~~~~d~~~~~~~~~~~~~i~~lL~~g~vPVv~g~d~v~~~~~~~~~ 170 (717)
...+++++++||..+|.+|...|..+|+.++|++++..|+.++.++.+..+.++++|++|+|||+++||.++.
T Consensus 69 ~~~~qa~aaiGq~~L~~~y~~~f~~~~~~~aqiLlt~~d~~~~~~~~n~~~~l~~lL~~g~VPIinend~~~~------- 141 (264)
T PTZ00489 69 VPNKQALASMGQPLLMHMYYTELQKHGILCAQMLLAAYDLDSRKRTINAHNTIEVLISHKVIPIINENDATAL------- 141 (264)
T ss_pred cHHHHHHHHhCHHHHHHHHHHHHHhCCCeEEEeeeeccccccchhhHHHHHHHHHHHHCCCEEEECCCCCccc-------
Confidence 1246799999999999999999999999999999999999888888888899999999999999999987664
Q ss_pred CCCeeecchHHHHHHHhhcCCCEEEEecccCccccCCC-ccccccc---cccccccchhHHHhcCCCCCcccCChHHHHH
Q 005041 171 SSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPP-SEPNSKL---IHTYIRAKHQAEITFGDKSRVGRGGMTAKVN 246 (717)
Q Consensus 171 ~~~~~~~sD~~A~~lA~~L~Ad~li~lTDV~GV~~~dP-~~p~a~~---i~~it~~e~~~~~~~gs~~~~~tggM~~Kv~ 246 (717)
.+..++|+|++|+.+|.+++||+|+|+|||||||++|| ++|++++ |++++.+++.. ..++.+.++||||.+|++
T Consensus 142 ~e~~~gdnD~lAa~lA~~l~Ad~LiilTDVdGVy~~dP~~~~~A~~~~~i~~i~~~~~~~--~~~~~~~~~tGGM~~Kl~ 219 (264)
T PTZ00489 142 HELVFGDNDRLSALVAHHFKADLLVILSDIDGYYTENPRTSTDAKIRSVVHELSPDDLVA--EATPNNRFATGGIVTKLQ 219 (264)
T ss_pred ceeEeCChHHHHHHHHHHhCCCEEEEeeccCeeEcCCCCCCCccceeeeeccCCHHHHHH--hcCcCCCcccCChHHHHH
Confidence 23345899999999999999999999999999999999 5899988 67777766533 223345689999999999
Q ss_pred HHHHHHHcCCcEEEEeCCCcchHHHHhcCC--cceEEEecC
Q 005041 247 AAYCAACAGIPVVITSGFAMDSIIKVLEGK--RVGTLFHRD 285 (717)
Q Consensus 247 aa~~a~~~gi~v~I~~g~~~~~l~~~~tg~--~iGT~i~a~ 285 (717)
+|..+.++|++++|+||+.|+.+.+.+.|+ ..||++.+.
T Consensus 220 aa~~a~~~Gi~v~I~~g~~~~~i~~~l~g~~~~~GT~~~~~ 260 (264)
T PTZ00489 220 AAQFLLERGGKMYLSSGFHLEKARDFLIGGSHEIGTLFYPR 260 (264)
T ss_pred HHHHHHHCCCCEEEEeCCCchHHHHHHcCCCCCCceEEeec
Confidence 999999999999999999999999998764 479998653
No 140
>PRK05429 gamma-glutamyl kinase; Provisional
Probab=100.00 E-value=5e-38 Score=340.97 Aligned_cols=258 Identities=43% Similarity=0.662 Sum_probs=217.6
Q ss_pred HHhhccCCeEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChhHhhHHHHhhhhccCCCcccccCcc
Q 005041 10 RDFLKNVKRVVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQ 89 (717)
Q Consensus 10 ~~~~~~~~~iVvKiGGs~l~~~~~~~~~~~l~~l~~~Ia~l~~~G~~vviVhGGg~~~~~~~l~~~~~~~~~~~~l~~~~ 89 (717)
|+.|+.++++|||||||++++++++++.+.+.+++++|+.+++.|+++||||||+...+...++. ...+..+.
T Consensus 2 ~~~~~~~~~iVIKiGGs~l~~~~~~l~~~~i~~la~~I~~l~~~g~~vViV~sGai~~g~~~l~l----~~~~~~~~--- 74 (372)
T PRK05429 2 RQALSDARRIVVKVGSSLLTGGGGGLDRARIAELARQIAALRAAGHEVVLVSSGAVAAGRERLGL----PERPKTLA--- 74 (372)
T ss_pred ccchhhCCEEEEEeChhhccCCCCCcCHHHHHHHHHHHHHHHHCCCeEEEEcccHhhhhHhhcCC----CCCCCchH---
Confidence 34566678999999999999988789999999999999999999999999999864444433221 11221111
Q ss_pred ccchHHHHHHhchHHHHHHHHHHhhcCCCCcceeEecccccCchhHhhHHHHHHHHHHhCCCeEEecCCCeeeccCCCCC
Q 005041 90 NELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYE 169 (717)
Q Consensus 90 ~~l~~~~~~a~G~~~~~~~~~~~l~~~g~~~~~~~~~~~d~~~~~~~~~~~~~i~~lL~~g~vPVv~g~d~v~~~~~~~~ 169 (717)
..++++++||..++.+|...|..+|+++.|++++..|+.+...+.+....+..||++|+|||+++||.+...
T Consensus 75 ---~~qa~aavGq~~L~~~~~~~l~~~gi~~~qil~t~~d~~~~~~~ln~~~~i~~Ll~~g~IPVi~~nd~v~~~----- 146 (372)
T PRK05429 75 ---EKQAAAAVGQSRLMQAYEELFARYGITVAQILLTRDDLEDRERYLNARNTLRTLLELGVVPIINENDTVATD----- 146 (372)
T ss_pred ---HHHHHHHHhHHHHHHHHHHHHHHCCCCEEEEEeehhHhhhhhHhhhHHHHHHHHHHCCCEEEEcCCCcccee-----
Confidence 245889999999999999999999999999999998887776676667899999999999999988877652
Q ss_pred CCCCeeecchHHHHHHHhhcCCCEEEEecccCccccCCC-ccccccccccccc--cchhHHHhcCCCCCcccCChHHHHH
Q 005041 170 DSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPP-SEPNSKLIHTYIR--AKHQAEITFGDKSRVGRGGMTAKVN 246 (717)
Q Consensus 170 ~~~~~~~~sD~~A~~lA~~L~Ad~li~lTDV~GV~~~dP-~~p~a~~i~~it~--~e~~~~~~~gs~~~~~tggM~~Kv~ 246 (717)
...++|+|++|+.+|.+|+||+|+|+|||||||++|| ++|++++|++|+. +|+.++. .++.+..++|||.+|++
T Consensus 147 --~l~~gd~D~~Aa~lA~~l~Ad~LiilTDVdGVy~~dP~~~p~a~~I~~i~~~~~e~~~~~-~~~~~~~gtGGM~~Kl~ 223 (372)
T PRK05429 147 --EIKFGDNDTLSALVANLVEADLLILLTDVDGLYTADPRKNPDAKLIPEVEEITDELEAMA-GGAGSGLGTGGMATKLE 223 (372)
T ss_pred --cccccChHHHHHHHHHHcCCCEEEEecCCCeeEcCCCCCCCCceEEEEeccCCHHHHHHh-cCCCCCcCcCCcHHHHH
Confidence 2335899999999999999999999999999999999 4899999999987 4565543 33445689999999999
Q ss_pred HHHHHHHcCCcEEEEeCCCcchHHHHhcCCcceEEEecC
Q 005041 247 AAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRD 285 (717)
Q Consensus 247 aa~~a~~~gi~v~I~~g~~~~~l~~~~tg~~iGT~i~a~ 285 (717)
+|..+.++|++++|+||+.++.+.+.+.|+..||++.+.
T Consensus 224 aa~~a~~~Gi~v~I~~g~~~~~l~~~l~g~~~GT~i~~~ 262 (372)
T PRK05429 224 AARIATRAGIPVVIASGREPDVLLRLLAGEAVGTLFLPQ 262 (372)
T ss_pred HHHHHHHCCCeEEEEcCCCccHHHHHhcCCCCCEEEeeC
Confidence 999999999999999999999999999998899999876
No 141
>cd04242 AAK_G5K_ProB AAK_G5K_ProB: Glutamate-5-kinase (G5K) catalyzes glutamate-dependent ATP cleavage; G5K transfers the terminal phosphoryl group of ATP to the gamma-carboxyl group of glutamate, in the first and controlling step of proline (and, in mammals, ornithine) biosynthesis. G5K is subject to feedback allosteric inhibition by proline or ornithine. In microorganisms and plants, proline plays an important role as an osmoprotectant and, in mammals, ornithine biosynthesis is crucial for proper ammonia detoxification, since a G5K mutation has been shown to cause human hyperammonaemia. Microbial G5K generally consists of two domains: a catalytic G5K domain and one PUA (pseudo uridine synthases and archaeosine-specific transglycosylases) domain, and some lack the PUA domain. G5K requires free Mg for activity, it is tetrameric, and it aggregates to higher forms in a proline-dependent way. G5K lacking the PUA domain remains tetrameric, active, and proline-inhibitable, but the Mg requir
Probab=100.00 E-value=1e-37 Score=322.65 Aligned_cols=247 Identities=50% Similarity=0.723 Sum_probs=211.4
Q ss_pred eEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChhHhhHHHHhhhhccCCCcccccCccccchHHHH
Q 005041 18 RVVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKAC 97 (717)
Q Consensus 18 ~iVvKiGGs~l~~~~~~~~~~~l~~l~~~Ia~l~~~G~~vviVhGGg~~~~~~~l~~~~~~~~~~~~l~~~~~~l~~~~~ 97 (717)
++|||||||+++++++.++.+.+.+++++|+.+++.|+++||||||+.++|+..++... .+..+. ..+++
T Consensus 1 ~iViK~GGs~i~~~~~~~~~~~i~~~~~~i~~~~~~~~~viiV~sg~~~~g~~~~~~~~----~~~~~~------~~~~~ 70 (251)
T cd04242 1 RIVVKVGSSLLTDEDGGLDLGRLASLVEQIAELRNQGKEVILVSSGAVAAGRQRLGLEK----RPKTLP------EKQAL 70 (251)
T ss_pred CEEEEeCCCeeeCCCCCcCHHHHHHHHHHHHHHHHCCCeEEEEecCchhhChhhhccCc----CCCchh------HHHHH
Confidence 48999999999999877788889999999999999999999999998988876433211 111111 23588
Q ss_pred HHhchHHHHHHHHHHhhcCCCCcceeEecccccCchhHhhHHHHHHHHHHhCCCeEEecCCCeeeccCCCCCCCCCeeec
Q 005041 98 AAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWD 177 (717)
Q Consensus 98 ~a~G~~~~~~~~~~~l~~~g~~~~~~~~~~~d~~~~~~~~~~~~~i~~lL~~g~vPVv~g~d~v~~~~~~~~~~~~~~~~ 177 (717)
+++||..++.+|...|..+|+++.|+++++++|.+...+.+..+.++.+|++|+|||+++||.+.+. +..++|
T Consensus 71 ~~~Gq~~l~~~~~~~l~~~Gi~~~q~l~t~~~~~~~~~~~~~~~~i~~ll~~g~iPVv~~~d~v~~~-------~~~~~~ 143 (251)
T cd04242 71 AAVGQSLLMALYEQLFAQYGIKVAQILLTRDDFEDRKRYLNARNTLETLLELGVIPIINENDTVATE-------EIRFGD 143 (251)
T ss_pred HHHhHHHHHHHHHHHHHHcCCeEEEEEEehhHhcchHHHHHHHHHHHHHHHCCCEEEEcCCCCeeee-------ccccCC
Confidence 9999999999999999999999999999998887766665557899999999999999998987762 223589
Q ss_pred chHHHHHHHhhcCCCEEEEecccCccccCCCc-ccccccccccc--ccchhHHHhcCCCCCcccCChHHHHHHHHHHHHc
Q 005041 178 NDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYI--RAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACA 254 (717)
Q Consensus 178 sD~~A~~lA~~L~Ad~li~lTDV~GV~~~dP~-~p~a~~i~~it--~~e~~~~~~~gs~~~~~tggM~~Kv~aa~~a~~~ 254 (717)
+|++|+.+|.+|+||+|+|+|||||||++||+ +|++++|++|+ .+|+.++. .++.+.+++|||.+|++++..+.++
T Consensus 144 ~D~~A~~lA~~l~Ad~liilTDVdGvy~~dP~~~~~a~~i~~i~~~~~e~~~~~-~~~~~~~~tggm~~Kl~a~~~a~~~ 222 (251)
T cd04242 144 NDRLSALVAGLVNADLLILLSDVDGLYDKNPRENPDAKLIPEVEEITDEIEAMA-GGSGSSVGTGGMRTKLKAARIATEA 222 (251)
T ss_pred hHHHHHHHHHHcCCCEEEEecCcCEEEeCCCCCCCCCeEEEEecCChHHHHHHh-cccCcCcccCCcHHHHHHHHHHHHC
Confidence 99999999999999999999999999999995 89999999999 77777643 2333458899999999999999999
Q ss_pred CCcEEEEeCCCcchHHHHhcCCcceEEE
Q 005041 255 GIPVVITSGFAMDSIIKVLEGKRVGTLF 282 (717)
Q Consensus 255 gi~v~I~~g~~~~~l~~~~tg~~iGT~i 282 (717)
|++++|+||+.|+.+.+.+.|+..||++
T Consensus 223 gi~v~I~~g~~~~~i~~~l~g~~~GT~i 250 (251)
T cd04242 223 GIPVVIANGRKPDVLLDILAGEAVGTLF 250 (251)
T ss_pred CCcEEEEcCCCCCHHHHHHcCCCCCeEe
Confidence 9999999999999999999998899986
No 142
>TIGR01027 proB glutamate 5-kinase. Bacterial ProB proteins hit the full length of this model, but the ProB-like domain of delta 1-pyrroline-5-carboxylate synthetase does not hit the C-terminal 100 residues of this model. The noise cutoff is set low enough to hit delta 1-pyrroline-5-carboxylate synthetase and other partial matches to this family.
Probab=100.00 E-value=1.9e-37 Score=335.07 Aligned_cols=252 Identities=43% Similarity=0.650 Sum_probs=215.6
Q ss_pred CeEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChhHhhHHHHhhhhccCCCcccccCccccchHHH
Q 005041 17 KRVVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKA 96 (717)
Q Consensus 17 ~~iVvKiGGs~l~~~~~~~~~~~l~~l~~~Ia~l~~~G~~vviVhGGg~~~~~~~l~~~~~~~~~~~~l~~~~~~l~~~~ 96 (717)
+++|||||||+++++++.++.+.+..++++|+.++++|+++||||||+...+...++.. ..+..+. .+++
T Consensus 1 ~riVIKiGgs~l~~~~~~~~~~~i~~la~~I~~l~~~g~~vvlV~sG~~~~g~~~lg~~----~~~~~l~------~~qa 70 (363)
T TIGR01027 1 QRIVVKVGSSSLTGSSGSLDRSHIAELVEQVAALHAAGHEVVIVSSGAIAAGFEALGLP----ERPKTLA------EKQA 70 (363)
T ss_pred CeEEEEeccceEeCCCCCcCHHHHHHHHHHHHHHHHCCCeEEEEeCcHHhcCccccCCC----CCccchH------HHHH
Confidence 46899999999999877789899999999999999999999999999876655433221 1112221 3468
Q ss_pred HHHhchHHHHHHHHHHhhcCCCCcceeEecccccCchhHhhHHHHHHHHHHhCCCeEEecCCCeeeccCCCCCCCCCeee
Q 005041 97 CAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFW 176 (717)
Q Consensus 97 ~~a~G~~~~~~~~~~~l~~~g~~~~~~~~~~~d~~~~~~~~~~~~~i~~lL~~g~vPVv~g~d~v~~~~~~~~~~~~~~~ 176 (717)
++++||..++.+|...|..+|++++|+++|.+|+.++..+.+...++..||++|+|||+++||.+... +..++
T Consensus 71 ~aa~Gq~~l~~~~~~~l~~~Gi~~aqillt~~d~~~~~~~lna~~~i~~Ll~~g~iPVi~end~v~~~-------~l~~g 143 (363)
T TIGR01027 71 LAAVGQVRLMQLYEQLFSQYGIKVAQILLTRADFSDRERYLNARNTLEALLELGVVPIINENDTVATE-------EIKFG 143 (363)
T ss_pred HHHhChHHHHHHHHHHHHHcCCeEEEEEEeccchhhHHHHHHHHHHHHHHHhCCCEEEEeCCCceeee-------ecCcC
Confidence 99999999999999999999999999999999999887787777999999999999999988887652 33458
Q ss_pred cchHHHHHHHhhcCCCEEEEecccCccccCCC-ccccccccccccccc-hhHHHhcCCCCCcccCChHHHHHHHHHHHHc
Q 005041 177 DNDSLAGLLALELKADLLVLLSDVEGLYSGPP-SEPNSKLIHTYIRAK-HQAEITFGDKSRVGRGGMTAKVNAAYCAACA 254 (717)
Q Consensus 177 ~sD~~A~~lA~~L~Ad~li~lTDV~GV~~~dP-~~p~a~~i~~it~~e-~~~~~~~gs~~~~~tggM~~Kv~aa~~a~~~ 254 (717)
++|++|+.+|.+|+||.|+|+|||||||++|| ++|++++|++|+..+ ....+..++.+.+++|||.+|+++|..|.+.
T Consensus 144 d~D~lAa~lA~~l~Ad~liilTDVdGVy~~dP~~~p~A~~I~~i~~~~~~~~~i~~~~~~~~gtGGM~~Kl~Aa~~a~~~ 223 (363)
T TIGR01027 144 DNDTLSALVAILVGADLLVLLTDVDGLYDADPRTNPDAKLIPVVEEITDLLLGVAGDSGSSVGTGGMRTKLQAADLATRA 223 (363)
T ss_pred ChHHHHHHHHHHcCCCEEEEEeCCCcccCCCCCCCCCCeEEEEeccCcHHHHHhhcCCCcCcCcCCchHHHHHHHHHHHC
Confidence 99999999999999999999999999999999 599999999998653 3334444444568999999999999999999
Q ss_pred CCcEEEEeCCCcchHHHHhcCCcceEEEecC
Q 005041 255 GIPVVITSGFAMDSIIKVLEGKRVGTLFHRD 285 (717)
Q Consensus 255 gi~v~I~~g~~~~~l~~~~tg~~iGT~i~a~ 285 (717)
|++++|+|++.|+.+.+.+.|+..||++.+.
T Consensus 224 gi~v~I~~g~~~~~l~~~l~g~~~GT~i~~~ 254 (363)
T TIGR01027 224 GVPVIIASGSKPEKIADALEGAPVGTLFHAQ 254 (363)
T ss_pred CCeEEEEeCCCccHHHHHhcCCCCcEEEeeC
Confidence 9999999999999999999999899999875
No 143
>COG0548 ArgB Acetylglutamate kinase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.9e-34 Score=291.42 Aligned_cols=241 Identities=24% Similarity=0.317 Sum_probs=188.8
Q ss_pred CCeEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChhHhhHHHHhhhhccCCCccc-ccCc---ccc
Q 005041 16 VKRVVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLAD-LQKP---QNE 91 (717)
Q Consensus 16 ~~~iVvKiGGs~l~~~~~~~~~~~l~~l~~~Ia~l~~~G~~vviVhGGg~~~~~~~l~~~~~~~~~~~~-l~~~---~~~ 91 (717)
++++|||+||+++.+.. .++.|+++|+.|+..|.++||||||||++++.+. ..++++.|.+ ++.+ .|+
T Consensus 2 ~k~~VIK~GG~~~~~~~------l~~~~~~di~lL~~~G~~~VvVHGggp~I~~~l~--~~gie~~f~~glRvTd~~tle 73 (265)
T COG0548 2 GKTIVIKLGGSAMEDEN------LLEAFASDIALLKSVGIRPVVVHGGGPQIDEMLA--KLGIEPEFVKGLRVTDAETLE 73 (265)
T ss_pred CceEEEEECceeecCch------HHHHHHHHHHHHHHCCCcEEEEeCCchHHHHHHH--HcCCCCeeeCCEEcCCHHHHH
Confidence 58999999999999864 3789999999999999999999999999999874 3466666665 4444 344
Q ss_pred chHHHHHHhchHHHHHHHHHHhhcCCCCcceeEecccc--------------cCchhH-hhHHHHHHHHHHhCCCeEEec
Q 005041 92 LDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSD--------------FRDEDF-RKQLYDTVQSLLDLRVIPIFN 156 (717)
Q Consensus 92 l~~~~~~a~G~~~~~~~~~~~l~~~g~~~~~~~~~~~d--------------~~~~~~-~~~~~~~i~~lL~~g~vPVv~ 156 (717)
+..+++ .|+... .+...|..+|..+..+...+++ ++..+. ...+++.++.+|++|+|||++
T Consensus 74 vv~mvl--~G~vNk--~iva~l~~~g~~avGlsg~Dg~li~A~~~~~~~~id~g~vG~i~~Vn~~~i~~ll~~~~IpVia 149 (265)
T COG0548 74 VVEMVL--GGTVNK--EIVARLSKHGGQAVGLSGVDGNLVTAKKLDVDDGVDLGYVGEIRKVNPELIERLLDNGAIPVIA 149 (265)
T ss_pred HHHHHH--HHHHHH--HHHHHHHHhCCcceeeeecCCCEEEEEEcccccccccceeeeEEEECHHHHHHHHhCCCceEEe
Confidence 444333 223222 2345666666554433322221 222111 124689999999999999997
Q ss_pred CCCeeeccCCCCCCCCCee-ecchHHHHHHHhhcCCCEEEEecccCccccCCCccccccccccccccchhHHHhcCCCCC
Q 005041 157 ENDAVSTRKAPYEDSSGIF-WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSR 235 (717)
Q Consensus 157 g~d~v~~~~~~~~~~~~~~-~~sD~~A~~lA~~L~Ad~li~lTDV~GV~~~dP~~p~a~~i~~it~~e~~~~~~~gs~~~ 235 (717)
+ ++.+..|..+ +|+|++|+++|.+|+|+|||++|||+|||+++| +| ++|++++.+|+++++.++
T Consensus 150 p--------ia~~~~G~~~NvnaD~~A~~iA~aLkAekLi~ltdv~Gvl~~~~-~~--s~i~~~~~~~~~~li~~~---- 214 (265)
T COG0548 150 P--------IAVDEDGETLNVNADTAAGALAAALKAEKLILLTDVPGVLDDKG-DP--SLISELDAEEAEELIEQG---- 214 (265)
T ss_pred c--------ceECCCCcEEeeCHHHHHHHHHHHcCCCeEEEEeCCcccccCCC-Cc--eeeccCCHHHHHHHHhcC----
Confidence 4 2344567778 999999999999999999999999999999865 33 699999999999988764
Q ss_pred cccCChHHHHHHHHHHHHcCCc-EEEEeCCCcchH-HHHhcCCcceEEEe
Q 005041 236 VGRGGMTAKVNAAYCAACAGIP-VVITSGFAMDSI-IKVLEGKRVGTLFH 283 (717)
Q Consensus 236 ~~tggM~~Kv~aa~~a~~~gi~-v~I~~g~~~~~l-~~~~tg~~iGT~i~ 283 (717)
.++|||+||+++|++|+++|++ |||+||+.++.+ .++|++..+||.+.
T Consensus 215 ~i~~GMi~Kv~~a~~A~~~Gv~~v~ii~g~~~~~ll~eLFt~~giGT~i~ 264 (265)
T COG0548 215 IITGGMIPKVEAALEALESGVRRVHIISGRVPHSLLLELFTRDGIGTMIV 264 (265)
T ss_pred CccCccHHHHHHHHHHHHhCCCeEEEecCCCcchHHHHHhcCCCcceEec
Confidence 7899999999999999999998 999999999997 88999999999875
No 144
>cd04241 AAK_FomA-like AAK_FomA-like: This CD includes a fosfomycin biosynthetic gene product, FomA, and similar proteins found in a wide range of organisms. Together, the fomA and fomB genes in the fosfomycin biosynthetic gene cluster of Streptomyces wedmorensis confer high-level fosfomycin resistance. FomA and FomB proteins converted fosfomycin to fosfomycin monophosphate and fosfomycin diphosphate in the presence of ATP and a magnesium ion, indicating that FomA and FomB catalyzed phosphorylations of fosfomycin and fosfomycin monophosphate, respectively. FomA and related sequences in this CD are members of the Amino Acid Kinase Superfamily (AAK).
Probab=100.00 E-value=3.3e-32 Score=282.38 Aligned_cols=243 Identities=23% Similarity=0.347 Sum_probs=180.9
Q ss_pred eEEEEeCCcccccCCC--cccHHHHHHHHHHHHHHHHCCCeEEEEecChhHhhHHHHhhhhccCCCcccccCccccchHH
Q 005041 18 RVVVKVGTAVVTRSDG--RLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGK 95 (717)
Q Consensus 18 ~iVvKiGGs~l~~~~~--~~~~~~l~~l~~~Ia~l~~~G~~vviVhGGg~~~~~~~l~~~~~~~~~~~~l~~~~~~l~~~ 95 (717)
++|||||||++++++. .++.+.+++++++|+.++ |+++||||||+++ ++..++.+ ++.+..+..+...+....+
T Consensus 1 ~iVIKiGGs~l~~~~~~~~~~~~~l~~l~~~l~~l~--g~~vvlVhGgg~~-~~~~~~~~-g~~~g~~~~~~~~l~~~~~ 76 (252)
T cd04241 1 MIILKLGGSVITDKDRPETIREENLERIARELAEAI--DEKLVLVHGGGSF-GHPKAKEY-GLPDGDGSFSAEGVAETHE 76 (252)
T ss_pred CEEEEEeceEEEcCCCCCccCHHHHHHHHHHHHhcc--CCCEEEEECCCcc-cCHHHHHh-CCCcCCCchhhhhHHHHHH
Confidence 4899999999998743 678888999999999887 9999999988764 55444433 2221111111111111111
Q ss_pred HHHHhchHHHHHHHHHHhhcCCCCcc-----eeEecccccCchhHhhHHHHHHHHHHhCCCeEEecCCCeeeccCCCCCC
Q 005041 96 ACAAVGQSSLMALYDTLFSQLDVTSS-----QLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYED 170 (717)
Q Consensus 96 ~~~a~G~~~~~~~~~~~l~~~g~~~~-----~~~~~~~d~~~~~~~~~~~~~i~~lL~~g~vPVv~g~d~v~~~~~~~~~ 170 (717)
++ ..++..+...|..+|+++. +++.+.. ...+.++.+.++++|++|+|||++| |.+...
T Consensus 77 ---~~--~~ln~~~~~~l~~~g~~a~~l~~~~~~~~~~----g~~~~~~~~~l~~ll~~g~iPVi~~-~~~~~~------ 140 (252)
T cd04241 77 ---AM--LELNSIVVDALLEAGVPAVSVPPSSFFVTEN----GRIVSFDLEVIKELLDRGFVPVLHG-DVVLDE------ 140 (252)
T ss_pred ---HH--HHHHHHHHHHHHHCCCCeEEEChHHeEEecC----CeeeeecHHHHHHHHhCCCEEEEcC-CeEecC------
Confidence 12 2345566678888887765 3333321 1123345789999999999999997 543331
Q ss_pred CCCe-eecchHHHHHHHhhcCCCEEEEecccCccccCCCccccccccccccccchhHHHhc-CCCCCcccCChHHHHHHH
Q 005041 171 SSGI-FWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITF-GDKSRVGRGGMTAKVNAA 248 (717)
Q Consensus 171 ~~~~-~~~sD~~A~~lA~~L~Ad~li~lTDV~GV~~~dP~~p~a~~i~~it~~e~~~~~~~-gs~~~~~tggM~~Kv~aa 248 (717)
.+.. ++|+|++|+.+|.+|+||+|+|+|||||||++|| |++++|++|+.+++++++.. ++.+.+++|||.+|+++|
T Consensus 141 ~~~~~~~~~D~~A~~lA~~l~A~~li~ltdv~Gv~~~~P--~~~~~i~~i~~~~~~~~~~~~~~~~~~~tGGm~~Kl~aa 218 (252)
T cd04241 141 GGGITILSGDDIVVELAKALKPERVIFLTDVDGVYDKPP--PDAKLIPEIDVGSLEDILAALGSAGTDVTGGMAGKIEEL 218 (252)
T ss_pred CCCeEEeChHHHHHHHHHHcCCCEEEEEeCCCeeECCCC--CCCeEcceeCccchHHHHHhcCcCCccccCCHHHHHHHH
Confidence 3333 4999999999999999999999999999999999 88999999999888876542 223357899999999999
Q ss_pred HHHHHcCCcEEEEeCCCcchHHHHhcCCcceEEE
Q 005041 249 YCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLF 282 (717)
Q Consensus 249 ~~a~~~gi~v~I~~g~~~~~l~~~~tg~~iGT~i 282 (717)
..++++|++++|+||+.++.+.+.++|+..||.+
T Consensus 219 ~~a~~~Gv~v~I~~g~~~~~l~~~l~g~~~GT~i 252 (252)
T cd04241 219 LELARRGIEVYIFNGDKPENLYRALLGNFIGTRI 252 (252)
T ss_pred HHHHhcCCeEEEEeCCCHHHHHHHHcCCCCceEC
Confidence 9999999999999999999999999998889864
No 145
>PRK12353 putative amino acid kinase; Reviewed
Probab=99.97 E-value=5e-31 Score=279.08 Aligned_cols=256 Identities=22% Similarity=0.285 Sum_probs=189.1
Q ss_pred cCCeEEEEeCCcccccCCC--cccHHHHHHHHHHHHHHHHCCCeEEEEecChhHhhHHHHhhhhccCCCcccccCccccc
Q 005041 15 NVKRVVVKVGTAVVTRSDG--RLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNEL 92 (717)
Q Consensus 15 ~~~~iVvKiGGs~l~~~~~--~~~~~~l~~l~~~Ia~l~~~G~~vviVhGGg~~~~~~~l~~~~~~~~~~~~l~~~~~~l 92 (717)
+++++||||||++|+++++ +++.+++.+++++|+.|+++|+++||||||++++|+.+++.... ..+.. ......
T Consensus 1 ~~~~iVIklGG~~L~~~~~~~~~~~~~i~~la~~Ia~l~~~G~~vvlV~Gg~~~~G~~~~~~~~~--~~~~~-~~~~~~- 76 (314)
T PRK12353 1 MMKKIVVALGGNALGSTPEEATAQLEAVKKTAKSLVDLIEEGHEVVITHGNGPQVGNILLAQEAA--ASEKN-KVPAMP- 76 (314)
T ss_pred CCcEEEEEECHHHhCCCCCCCcccHHHHHHHHHHHHHHHHCCCEEEEEeCCchHhCHHHhcCccc--cccCC-CCCCch-
Confidence 3588999999999999875 48889999999999999999999999999999999986543221 11111 111111
Q ss_pred hHHHHHHhchH----HHHHHHHHHhhcCCC------CcceeEecccccC--ch---------------------------
Q 005041 93 DGKACAAVGQS----SLMALYDTLFSQLDV------TSSQLLVTDSDFR--DE--------------------------- 133 (717)
Q Consensus 93 ~~~~~~a~G~~----~~~~~~~~~l~~~g~------~~~~~~~~~~d~~--~~--------------------------- 133 (717)
.++..+.++. .++..|+..|..+|+ ...|++++.+|+. ..
T Consensus 77 -~~~~~a~~qg~l~~~l~~~~~~~l~~~~~~~~~~~~v~q~ll~~~d~~f~~~~~p~g~~~~~~~~~~~~~~~g~~~~~~ 155 (314)
T PRK12353 77 -LDVCGAMSQGYIGYHLQNALRNELLKRGIDKPVATVVTQVVVDANDPAFKNPTKPIGPFYTEEEAEKLAKEKGYTFKED 155 (314)
T ss_pred -hHHHHHHHhHHHHHHHHHHHHHHHHhcCCCcccceEEEEEEEcCCcccccCCCccccccccHHHHHHhhhhcCceeeec
Confidence 1244455554 345678889999888 4556667766522 21
Q ss_pred -h-Hhh-----------HHHHHHHHHHhCCCeEEecCCCeeeccCCCCCCCCC-eeecchHHHHHHHhhcCCCEEEEecc
Q 005041 134 -D-FRK-----------QLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSG-IFWDNDSLAGLLALELKADLLVLLSD 199 (717)
Q Consensus 134 -~-~~~-----------~~~~~i~~lL~~g~vPVv~g~d~v~~~~~~~~~~~~-~~~~sD~~A~~lA~~L~Ad~li~lTD 199 (717)
+ .+. .+.+.++.+|++|+|||++|...++.........+. .++|+|++|+.+|.+|+||+|+|+||
T Consensus 156 ~~~~~r~~v~sp~p~~~v~~~~i~~lL~~g~IpV~~g~gg~Pi~~~~~~~~~~~~~~d~D~lAa~lA~~l~Ad~Li~lTd 235 (314)
T PRK12353 156 AGRGYRRVVPSPKPVDIVEIEAIKTLVDAGQVVIAAGGGGIPVIREGGGLKGVEAVIDKDFASAKLAELVDADLLIILTA 235 (314)
T ss_pred CCceeEeccCCCCccccccHHHHHHHHHCCCEEEEcCCCCCCEEEeCCceeeeeEecCHHHHHHHHHHHhCCCEEEEEeC
Confidence 0 021 246899999999999999984322221000000011 14899999999999999999999999
Q ss_pred cCccccCCCccccccccccccccchhHHHhcCCCCCcccCChHHHHHHHHHHH--HcCCcEEEEeCCCcchHHHHhcCCc
Q 005041 200 VEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAA--CAGIPVVITSGFAMDSIIKVLEGKR 277 (717)
Q Consensus 200 V~GV~~~dP~~p~a~~i~~it~~e~~~~~~~gs~~~~~tggM~~Kv~aa~~a~--~~gi~v~I~~g~~~~~l~~~~tg~~ 277 (717)
|||||+++| +|++++|++|+.+++.+++..+ ...+|||.+|+++|..++ +.|++++|+| ++.+.+.+.|+
T Consensus 236 vdGVy~~~~-~~~a~~i~~i~~~e~~~~~~~~---~~~tGGM~~Kl~aA~~a~~~~~g~~v~I~~---~~~i~~~l~g~- 307 (314)
T PRK12353 236 VDKVYINFG-KPNQKKLDEVTVSEAEKYIEEG---QFAPGSMLPKVEAAISFVESRPGRKAIITS---LEKAKEALEGK- 307 (314)
T ss_pred CccccCCCC-CCCCeECcCcCHHHHHHHHhcC---CcCCCCcHHHHHHHHHHHHHcCCCEEEECC---chHHHHHhCCC-
Confidence 999999766 6899999999998887766432 467899999999999998 5678899998 77888888887
Q ss_pred ceEEEe
Q 005041 278 VGTLFH 283 (717)
Q Consensus 278 iGT~i~ 283 (717)
.||++.
T Consensus 308 ~GT~i~ 313 (314)
T PRK12353 308 AGTVIV 313 (314)
T ss_pred CCeEec
Confidence 899874
No 146
>cd04237 AAK_NAGS-ABP AAK_NAGS-ABP: N-acetylglutamate (NAG) kinase-like domain of the NAG Synthase (NAGS) of the arginine-biosynthesis pathway (ABP) found in gamma- and beta-proteobacteria and higher plant chloroplasts. Domain architecture of these NAGS consisted of an N-terminal NAG kinase-like (ArgB) domain (this CD) and a C-terminal NAG synthase, acetyltransferase (ArgA) domain. Both bacterial and plant sequences in this CD have a conserved N-terminal extension; a similar sequence in the NAG kinases of the cyclic arginine-biosynthesis pathway has been implicated in feedback inhibition sensing. Plant sequences also have an N-terminal chloroplast transit peptide and an insert (approx. 70 residues) in the C-terminal region of ArgB. Members of this CD belong to the Amino Acid Kinase Superfamily (AAK).
Probab=99.97 E-value=7.2e-31 Score=274.84 Aligned_cols=242 Identities=21% Similarity=0.292 Sum_probs=176.4
Q ss_pred CCeEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChhHhhHHHHhhhhccCCCccc-ccCccccchH
Q 005041 16 VKRVVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLAD-LQKPQNELDG 94 (717)
Q Consensus 16 ~~~iVvKiGGs~l~~~~~~~~~~~l~~l~~~Ia~l~~~G~~vviVhGGg~~~~~~~l~~~~~~~~~~~~-l~~~~~~l~~ 94 (717)
++++|||+||+++.++. +.+++++|+.|++.|+++|||||||+++++.+. ..++++.|.+ ++.+.++...
T Consensus 18 ~~~~VIKlGG~ai~~~~-------l~~~~~~ia~l~~~g~~~ViVHGggp~i~~~~~--~~gi~~~~~~G~RvT~~~~l~ 88 (280)
T cd04237 18 GKTFVIAFGGEAVAHPN-------FDNIVHDIALLHSLGIRLVLVHGARPQIDQRLA--ERGLEPRYHRGLRITDAAALE 88 (280)
T ss_pred CCEEEEEEChHHhcCch-------HHHHHHHHHHHHHCCCcEEEEeCCCHHHHHHHH--HcCCCccccCCcCcCCHHHHH
Confidence 47899999999998753 789999999999999999999999999999764 3345555543 4444332221
Q ss_pred HHHHHhchHHH--HHHHHHHhhcCCCCcceeEeccc--------------ccCchhHh-hHHHHHHHHHHhCCCeEEecC
Q 005041 95 KACAAVGQSSL--MALYDTLFSQLDVTSSQLLVTDS--------------DFRDEDFR-KQLYDTVQSLLDLRVIPIFNE 157 (717)
Q Consensus 95 ~~~~a~G~~~~--~~~~~~~l~~~g~~~~~~~~~~~--------------d~~~~~~~-~~~~~~i~~lL~~g~vPVv~g 157 (717)
....+.|.... ...+...+.+.|+....+...+. ++...+.. ..+.+.|+.+|++|+|||+++
T Consensus 89 ~~~~~~g~v~~~l~~~l~~~~~a~~~~~~~~~~~~~~~v~~~~~~~~~~~~~g~~G~v~~v~~~~i~~lL~~g~ipv~~~ 168 (280)
T cd04237 89 CVKEAAGAVRLEIEALLSMGLPNSPMAGARIRVVSGNFVTARPLGVVDGVDFGHTGEVRRIDADAIRRQLDQGSIVLLSP 168 (280)
T ss_pred HHHHHHHHHHHHHHHHHHhhccccCcCCCceEEecCeEEEEEECCcccCceEeeeccEEEEcHHHHHHHHHCCCEEEECC
Confidence 12222344332 22223333333332212211111 11111111 145799999999999999975
Q ss_pred CCeeeccCCCCCCCCCee-ecchHHHHHHHhhcCCCEEEEecccCccccCCCccccccccccccccchhHHHhcCCCCCc
Q 005041 158 NDAVSTRKAPYEDSSGIF-WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRV 236 (717)
Q Consensus 158 ~d~v~~~~~~~~~~~~~~-~~sD~~A~~lA~~L~Ad~li~lTDV~GV~~~dP~~p~a~~i~~it~~e~~~~~~~gs~~~~ 236 (717)
++++..+..+ +|+|.+|+.+|.+|+|++|+|+|||||||+++ +++|++|+.+|+++++..+. .
T Consensus 169 --------~g~~~~g~~lnvnaD~~A~~LA~~L~a~klv~ltdv~GV~~~~-----~~~i~~i~~~e~~~l~~~~~---~ 232 (280)
T cd04237 169 --------LGYSPTGEVFNLSMEDVATAVAIALKADKLIFLTDGPGLLDDD-----GELIRELTAQEAEALLETGA---L 232 (280)
T ss_pred --------ceECCCCCEEeeCHHHHHHHHHHHcCCCEEEEEeCCCcccCCC-----CCccccCCHHHHHHHHHcCC---C
Confidence 2233345556 89999999999999999999999999999852 78999999999998887542 2
Q ss_pred ccCChHHHHHHHHHHHHcCCc-EEEEeCCCcchH-HHHhcCCcceEEE
Q 005041 237 GRGGMTAKVNAAYCAACAGIP-VVITSGFAMDSI-IKVLEGKRVGTLF 282 (717)
Q Consensus 237 ~tggM~~Kv~aa~~a~~~gi~-v~I~~g~~~~~l-~~~~tg~~iGT~i 282 (717)
.+|||+|||++|..+++.|++ +||+|++.|+.+ .++++.+..||.+
T Consensus 233 ~~ggM~~Kv~~a~~a~~~Gv~~v~I~~~~~~~~ll~elft~~g~GT~i 280 (280)
T cd04237 233 LTNDTARLLQAAIEACRGGVPRVHLISYAEDGALLLELFTRDGVGTLI 280 (280)
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHhcCCCCCCcC
Confidence 499999999999999999996 999999999998 8889988889863
No 147
>CHL00202 argB acetylglutamate kinase; Provisional
Probab=99.97 E-value=1.1e-30 Score=274.31 Aligned_cols=242 Identities=19% Similarity=0.268 Sum_probs=179.2
Q ss_pred CCeEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChhHhhHHHHhhhhccCCCccc-ccCcc---cc
Q 005041 16 VKRVVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLAD-LQKPQ---NE 91 (717)
Q Consensus 16 ~~~iVvKiGGs~l~~~~~~~~~~~l~~l~~~Ia~l~~~G~~vviVhGGg~~~~~~~l~~~~~~~~~~~~-l~~~~---~~ 91 (717)
.+++|||+||+++.+.. ....++++|+.|+..|.++|||||||+++.+.+. .+ ++++.|.+ ++.++ +.
T Consensus 23 ~~~~VIk~gG~~~~~~~------l~~~~~~di~~l~~~g~~~VlVHGgg~~i~~~~~-~~-g~~~~~~~G~rvT~~~~l~ 94 (284)
T CHL00202 23 GRIMVIKYGGAAMKNLI------LKADIIKDILFLSCIGLKIVVVHGGGPEINFWLK-QL-NISPKFWNGIRVTDKVTME 94 (284)
T ss_pred CCeEEEEEChHHhcCcc------hHHHHHHHHHHHHHCCCcEEEEeCCcHHHHHHHH-HC-CCCCEeECCcccCCHHHHH
Confidence 47999999999998753 1458999999999999999999999998877653 23 44444433 43333 22
Q ss_pred chHHHHHHhchHHHHHHHHHHhhcCCCCcceeEeccc-----------ccCchhHh-hHHHHHHHHHHhCCCeEEecCCC
Q 005041 92 LDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDS-----------DFRDEDFR-KQLYDTVQSLLDLRVIPIFNEND 159 (717)
Q Consensus 92 l~~~~~~a~G~~~~~~~~~~~l~~~g~~~~~~~~~~~-----------d~~~~~~~-~~~~~~i~~lL~~g~vPVv~g~d 159 (717)
+..+ ...|... ..+...|...|+++..+...+. |+...+.. ..+.+.++.+|++|+|||+++
T Consensus 95 ~~~~--~l~g~ln--~~lv~~L~~~Gv~av~l~~~d~~~i~a~~~~~~d~~~~G~i~~v~~~~i~~ll~~g~iPVi~~-- 168 (284)
T CHL00202 95 IVEM--VLAGKVN--KDLVGSINANGGKAVGLCGKDANLIVARASDKKDLGLVGEIQQVDPQLIDMLLEKNYIPVIAS-- 168 (284)
T ss_pred HHHH--HHhhHHH--HHHHHHHHhCCCCeeeeeeccCCEEEEEeCCCcccccceeEEecCHHHHHHHHHCCCEEEECC--
Confidence 2221 2234322 2345667777776654422211 22222221 245799999999999999985
Q ss_pred eeeccCCCCCCCCCee-ecchHHHHHHHhhcCCCEEEEecccCccccCCCccccccccccccccchhHHHhcCCCCCccc
Q 005041 160 AVSTRKAPYEDSSGIF-WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGR 238 (717)
Q Consensus 160 ~v~~~~~~~~~~~~~~-~~sD~~A~~lA~~L~Ad~li~lTDV~GV~~~dP~~p~a~~i~~it~~e~~~~~~~gs~~~~~t 238 (717)
++++..+..+ +|+|++|+.+|.+|+||+|+|+|||+|||+++ .+| +++|++++++|+++++..+ +++
T Consensus 169 ------~~~~~~g~~~ni~~D~~A~~lA~~l~Ad~li~lTdv~Gv~~~~-~d~-~~~i~~i~~~e~~~l~~~g----~~t 236 (284)
T CHL00202 169 ------VAADHDGQTYNINADVVAGEIAAKLNAEKLILLTDTPGILADI-NDP-NSLISTLNIKEARNLASTG----IIS 236 (284)
T ss_pred ------CccCCCCcEEecCHHHHHHHHHHHhCCCEEEEEeCChhhcCCC-CCC-CCccccccHHHHHHHHhcC----CCC
Confidence 1223345556 89999999999999999999999999999853 233 4799999999988876533 789
Q ss_pred CChHHHHHHHHHHHHcCCc-EEEEeCCCcchH-HHHhcCCcceEEEe
Q 005041 239 GGMTAKVNAAYCAACAGIP-VVITSGFAMDSI-IKVLEGKRVGTLFH 283 (717)
Q Consensus 239 ggM~~Kv~aa~~a~~~gi~-v~I~~g~~~~~l-~~~~tg~~iGT~i~ 283 (717)
|||.+|+++|..++++|++ +||+||+.++.+ .++++++..||.+.
T Consensus 237 GGM~~Kl~aa~~a~~~Gv~~v~I~~g~~~~~ll~el~~~~g~GT~i~ 283 (284)
T CHL00202 237 GGMIPKVNCCIRALAQGVEAAHIIDGKEKHALLLEILTEKGIGSMLV 283 (284)
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeCCCCCChHHHHHhcCCCCceEEe
Confidence 9999999999999999998 999999999985 99999999999874
No 148
>cd07080 ALDH_Acyl-CoA-Red_LuxC Acyl-CoA reductase LuxC. Acyl-CoA reductase, LuxC, (EC=1.2.1.50) is the fatty acid reductase enzyme responsible for synthesis of the aldehyde substrate for the luminescent reaction catalyzed by luciferase. The fatty acid reductase, a luminescence-specific, multienzyme complex (LuxCDE), reduces myristic acid to generate the long chain fatty aldehyde required for the luciferase-catalyzed reaction resulting in the emission of blue-green light. Mutational studies of conserved cysteines of LuxC revealed that the cysteine which aligns with the catalytic cysteine conserved throughout the ALDH superfamily is the LuxC acylation site. This CD is composed of mainly bacterial sequences but also includes a few archaeal sequences similar to the Methanospirillum hungateiacyl acyl-CoA reductase RfbN.
Probab=99.97 E-value=1.9e-30 Score=287.65 Aligned_cols=315 Identities=14% Similarity=0.087 Sum_probs=232.5
Q ss_pred hHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHH---HHHHHHHHHhhchhHHHHHHhhcChhHHHHHH
Q 005041 294 GAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVE---NEADVAAAQEAGYAKSLVSRLALKPGKISSLA 370 (717)
Q Consensus 294 ~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~---~~~d~~~~~~~g~~~a~~~~~~~~~~~i~~~~ 370 (717)
-+++.++..+++++.|..-+...|...++++...+..+.+.+.+. +..++.+. .+...+
T Consensus 25 ~~~~iv~~l~~~~~~~~~~~~~~r~~~l~~l~~~~~~~~~~~~~a~~~l~~~~~r~------------------~l~~~l 86 (422)
T cd07080 25 PVEEIVDFLDRAGKRLLDPDYPLRQQAERLLPTVTGYSEEMLREGLKRLMALFRRE------------------NLERIL 86 (422)
T ss_pred CHHHHHHHHHHHHHHhcCCCchHHHHHHHhhhhccCCCHHHHHHHHHHHHHHcCHH------------------HHHHHH
Confidence 467778888899999999999999999999999998888887776 22222111 111111
Q ss_pred HHHHHHhcccccccccccccccCCCceEEEeecceeEEEEEcCC-CchhHHHHHHHHHHhCCEEEEeCCcchHHHHHHHH
Q 005041 371 KSIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILH 449 (717)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~ 449 (717)
.. .+. ..+...+ +. +.+...+++++|+|||++|+|| +|.+.++++++||++||++|+|||+.+|.++.+++
T Consensus 87 ~~--el~-~~~~Ld~----w~-~~~~~~~~~~~P~Gvv~~I~p~N~P~l~~~s~~~aLlaGN~~ilKpS~~~p~~~~~l~ 158 (422)
T cd07080 87 ER--ELG-SPGILDE----WV-PPGRGGYIRAQPRGLVVHIIAGNVPLLPVWSIVRGLLVKNVNLLKMSSSDPLTATALL 158 (422)
T ss_pred HH--hcC-CcccccC----Cc-cCCCCCeeEEcCCceEEEEccCCccccHHHHHHHHHHhcCceEEECCCccchHHHHHH
Confidence 11 010 0011100 10 1123446789999999999998 58888899999999999999999999999999999
Q ss_pred HHHHHhcccccCc----CceEEec--C-CChhhhhhcCCCCccEEEeecCHHHHHHHHhhcC-CCEEEecCCc-ceEEEc
Q 005041 450 KVITSAIPDTVGE----KLIGLVT--S-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK-IPVLGHADGI-CHVYVD 520 (717)
Q Consensus 450 ~~~~~al~~alP~----gvv~vv~--~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a~-~p~~lElGGk-~p~iV~ 520 (717)
+++.+ ++|+ +.++++. | ++++++.|..++ |+|+||||+++|+.|++.+. .+.++|+||| +++|++
T Consensus 159 ~~l~~----~~p~~~~~~~~~vv~~~g~~~~~~~~l~~~~--D~i~~~Gs~~~~~~i~~~a~~~~~~Le~Ggk~s~~vi~ 232 (422)
T cd07080 159 RSLAD----VDPNHPLTDSISVVYWPGGDAELEERILASA--DAVVAWGGEEAVKAIRSLLPPGCRLIDFGPKYSFAVID 232 (422)
T ss_pred HHHHh----cCCCCcccceEEEEEecCCchHHHHHHHHhC--CEEEEeCCHHHHHHHHHhCCCCCeeeecCCceeEEEec
Confidence 99986 5888 8899984 4 344777777776 99999999999999998874 5689999999 556666
Q ss_pred CCC----CHHHHHHHHHhhccCCCc-cccccceEEEcCcc---cChhhHHHHHHHHHHcCceEecCc-cc----------
Q 005041 521 KSA----NLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDL---ACNGALNELVVELQHEGVGLFGGP-RA---------- 581 (717)
Q Consensus 521 ~dA----Dl~~A~~~i~~~~~~n~g-~C~a~~rv~V~~~i---~d~~f~~~l~~~~~~~~~~~~g~~-~~---------- 581 (717)
++| |++++++.+++++|.|+| .|+|++|+|||+++ + ++|.++|.++++++......+. ..
T Consensus 233 ~~a~~~~dl~~aa~~~a~~~~~~~gQ~C~sp~~v~V~~~~~~~~-~~f~~~l~~~l~~~~~~~p~~~~~~~~~~~~~~~r 311 (422)
T cd07080 233 REALESEKLAEVADALAEDICRYDQQACSSPQVVFVEKDDDEEL-REFAEALAAALERLPRRYPALSLSAAESAKIARAR 311 (422)
T ss_pred HHhhccccHHHHHHHHHHHHHHHhhhhccCCeEEEEECCCCchH-HHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHH
Confidence 669 999999999999999987 99999999999999 9 7999999999887632111100 00
Q ss_pred --------ccc-c-c----C--C-CCccccccccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEecCHHHHHHHHhcCC
Q 005041 582 --------SKL-L-Q----I--P-ETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVD 644 (717)
Q Consensus 582 --------~~~-~-p----i--~-~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~ 644 (717)
... . . | . ...+ ..-.++=.+.|.++++++|++..++. |=-|.++|..+.+. .++++++-
T Consensus 312 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~r~v~v~~v~~l~~~l~~~~~--~lQTvg~~~~~~~~-~~~~~~l~ 387 (422)
T cd07080 312 LEAEFYELKGGVSRDLGWTVIISDEIGL-EASPLNRTVNVKPVASLDDVLRPVTP--YLQTVGLAPSPAEL-AELADALA 387 (422)
T ss_pred HHHHHHHHhcCCCCCCCeEEEEeCCCCc-cCCCCcCEEEEEEcchHHHHHHhhhh--hcceeEeecChhhH-HHHHHHHH
Confidence 000 0 0 1 1 1111 11223346788899999999999985 88899999998887 67777665
Q ss_pred e
Q 005041 645 S 645 (717)
Q Consensus 645 ~ 645 (717)
.
T Consensus 388 ~ 388 (422)
T cd07080 388 A 388 (422)
T ss_pred H
Confidence 4
No 149
>TIGR00746 arcC carbamate kinase. The seed alignment for this model includes experimentally confirmed examples from a set of phylogenetically distinct species. In a neighbor-joining tree constructed from an alignment of candidate carbamate kinases and several acetylglutamate kinases, the latter group forms a clear outgroup which roots the tree of carbamate kinase-like proteins. This analysis suggests that in E. coli, the ArcC paralog YqeA may be a second isozyme, while the paralog YahI branches as an outlier and is less likely to be an authentic carbamate kinase. The homolog from Mycoplasma pneumoniae likewise branches outside the set containing known carbamate kinases and also scores below the trusted cutoff.
Probab=99.97 E-value=2.2e-30 Score=271.70 Aligned_cols=243 Identities=23% Similarity=0.324 Sum_probs=184.7
Q ss_pred CeEEEEeCCcccccCCC----cccHHHHHHHHHHHHHHHHCCCeEEEEecChhHhhHHHHhhhhccCCCcccccCccccc
Q 005041 17 KRVVVKVGTAVVTRSDG----RLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNEL 92 (717)
Q Consensus 17 ~~iVvKiGGs~l~~~~~----~~~~~~l~~l~~~Ia~l~~~G~~vviVhGGg~~~~~~~l~~~~~~~~~~~~l~~~~~~l 92 (717)
+++|||+||++|.++++ ..+..++..++++|+.|++.|+++|||||||+++|...++..... ..+.. +
T Consensus 1 ~riViklGgnaL~~~g~~~~~~~~~~~i~~~a~~ia~l~~~g~~vviv~gngpqvG~~~l~~~~~~----~~~~~--~-- 72 (310)
T TIGR00746 1 KRVVVALGGNALLQRGEKGSAEAQRDNVRQTAPQIAKLIKRGYELVITHGNGPQVGNLLLQNQAAD----SEVPA--M-- 72 (310)
T ss_pred CeEEEEECHHHhCCCCCCCCcchhHHHHHHHHHHHHHHHHCCCEEEEEECChHHHHHHHhcccccc----ccCCC--C--
Confidence 57999999999997642 245778999999999999999999999999999998765432211 11111 1
Q ss_pred hHHHHHHhchHHHHHHHHHHhh----cCCCC------cceeEecccc--cCchhHh------------------------
Q 005041 93 DGKACAAVGQSSLMALYDTLFS----QLDVT------SSQLLVTDSD--FRDEDFR------------------------ 136 (717)
Q Consensus 93 ~~~~~~a~G~~~~~~~~~~~l~----~~g~~------~~~~~~~~~d--~~~~~~~------------------------ 136 (717)
-.+++.|.+|..++.+|+..|. .+|+. .+|++++..| |.+..++
T Consensus 73 p~~~~~A~~qg~lg~~~~~~l~~~l~~~g~~~~v~~~vtqv~v~~~D~af~~p~k~ig~~y~~~~a~~~~~~~~~~~~~d 152 (310)
T TIGR00746 73 PLDVLGAMSQGMIGYMLQQALNNELPKRGMEKPVATVLTQTIVDPKDPAFQNPTKPIGPFYTEEEAKRLAAEKGWIVKED 152 (310)
T ss_pred cchHHHHhhHHHHHHHHHHHHHHHHHhcCCCccceEEEEEEEECCCcccccCCCCcCCCCcCHHHHHHHHHHcCCeEeec
Confidence 1246778888888877777776 66743 4577777666 5443322
Q ss_pred ----------------hHHHHHHHHHHhCCC---------eEEecCCCeeeccCCCCCCCCCeeecchHHHHHHHhhcCC
Q 005041 137 ----------------KQLYDTVQSLLDLRV---------IPIFNENDAVSTRKAPYEDSSGIFWDNDSLAGLLALELKA 191 (717)
Q Consensus 137 ----------------~~~~~~i~~lL~~g~---------vPVv~g~d~v~~~~~~~~~~~~~~~~sD~~A~~lA~~L~A 191 (717)
.++.+.|+.+|++|. +||+++||.+... ..++|+|++|+.+|.+|+|
T Consensus 153 ~~~~~rrvv~sp~p~~iv~~~~I~~LL~~G~iVI~~ggggiPvi~e~~~~~g~--------e~~id~D~lAa~lA~~l~A 224 (310)
T TIGR00746 153 AGRGWRRVVPSPRPKDIVEAETIKTLVENGVIVISSGGGGVPVVLEGAELKGV--------EAVIDKDLASEKLAEEVNA 224 (310)
T ss_pred CCCcceEeecCCCchhhccHHHHHHHHHCCCEEEeCCCCCcCEEecCCeEEee--------EecCCHHHHHHHHHHHhCC
Confidence 144689999999999 4444443332210 0138999999999999999
Q ss_pred CEEEEecccCccccCCCccccccccccccccchhHHHhcCCCCCcccCChHHHHHHHHHHHHcC-CcEEEEeCCCcchHH
Q 005041 192 DLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAG-IPVVITSGFAMDSII 270 (717)
Q Consensus 192 d~li~lTDV~GV~~~dP~~p~a~~i~~it~~e~~~~~~~gs~~~~~tggM~~Kv~aa~~a~~~g-i~v~I~~g~~~~~l~ 270 (717)
|+|||+|||||||++ |.+|++++|++++.+|+.+++.. +...+|||.+|+++|..+++.| .+++|+| ++.+.
T Consensus 225 D~LIiLTDVdGVy~~-~~~p~a~~i~~it~~e~~~~~~~---g~~~tGgM~~Kl~AA~~~~~~g~~~v~I~~---~~~i~ 297 (310)
T TIGR00746 225 DILVILTDVDAVYIN-YGKPDEKALREVTVEELEDYYKA---GHFAAGSMGPKVEAAIEFVESGGKRAIITS---LENAV 297 (310)
T ss_pred CEEEEEeCCCceeCC-CCCCCCcCCcCcCHHHHHHHHhc---CCcCCCCcHHHHHHHHHHHHhCCCeEEEec---hHHHH
Confidence 999999999999997 45789999999999998876643 2477999999999999988875 4599998 77889
Q ss_pred HHhcCCcceEEEe
Q 005041 271 KVLEGKRVGTLFH 283 (717)
Q Consensus 271 ~~~tg~~iGT~i~ 283 (717)
+.+.|+ .||.+.
T Consensus 298 ~~l~G~-~GT~I~ 309 (310)
T TIGR00746 298 EALEGK-AGTRVT 309 (310)
T ss_pred HHHCCC-CCcEEe
Confidence 999998 899874
No 150
>PLN02512 acetylglutamate kinase
Probab=99.97 E-value=6.4e-30 Score=271.13 Aligned_cols=244 Identities=22% Similarity=0.273 Sum_probs=179.4
Q ss_pred CCeEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChhHhhHHHHhhhhccCCCccc-ccCccccchH
Q 005041 16 VKRVVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLAD-LQKPQNELDG 94 (717)
Q Consensus 16 ~~~iVvKiGGs~l~~~~~~~~~~~l~~l~~~Ia~l~~~G~~vviVhGGg~~~~~~~l~~~~~~~~~~~~-l~~~~~~l~~ 94 (717)
++++||||||++++|++ ....++++|+.|+..|.++|||||||+++...+ ..+ +..+.+.+ ++.++.....
T Consensus 47 ~~tiVIKlGGs~i~d~~------~~~~~~~di~~l~~~g~~iVlVHGgG~~i~~~~-~~~-gi~~~~~~G~rvT~~~~le 118 (309)
T PLN02512 47 GKTVVVKYGGAAMKDPE------LKAGVIRDLVLLSCVGLRPVLVHGGGPEINSWL-KKV-GIEPQFKNGLRVTDAETME 118 (309)
T ss_pred CCeEEEEECCeeccChh------HHHHHHHHHHHHHHCCCCEEEEECCcHHHHHHH-HHc-CCCCcCCCCCcCCCHHHHH
Confidence 58899999999999875 246799999999999999999999988776654 323 34444433 3333311100
Q ss_pred -HHHHHhchHHHHHHHHHHhhcCCCCcceeEeccc------------ccCchhHh-hHHHHHHHHHHhCCCeEEecCCCe
Q 005041 95 -KACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDS------------DFRDEDFR-KQLYDTVQSLLDLRVIPIFNENDA 160 (717)
Q Consensus 95 -~~~~a~G~~~~~~~~~~~l~~~g~~~~~~~~~~~------------d~~~~~~~-~~~~~~i~~lL~~g~vPVv~g~d~ 160 (717)
..+..+|. +...+...|.++|+++..+.-.+. ++...+.. ..+.+.++.+|+.|+|||++| .
T Consensus 119 i~~~~l~g~--ln~~lv~~L~~~Gv~av~l~g~d~~~i~a~~~~~~~~~~~~G~i~~v~~~~i~~lL~~g~IPVi~~-~- 194 (309)
T PLN02512 119 VVEMVLVGK--VNKSLVSLINKAGGTAVGLSGKDGRLLRARPSPNSADLGFVGEVTRVDPTVLRPLVDDGHIPVIAT-V- 194 (309)
T ss_pred HHHHHHhhH--HHHHHHHHHHHcCCCeEEeehhhCCEEEEEEcCcCccccccceeeecCHHHHHHHHhCCCEEEEeC-c-
Confidence 01112333 233455777788887655422111 22222221 245799999999999999997 1
Q ss_pred eeccCCCCCCCCCee-ecchHHHHHHHhhcCCCEEEEecccCccccCCCccccccccccccccchhHHHhcCCCCCcccC
Q 005041 161 VSTRKAPYEDSSGIF-WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRG 239 (717)
Q Consensus 161 v~~~~~~~~~~~~~~-~~sD~~A~~lA~~L~Ad~li~lTDV~GV~~~dP~~p~a~~i~~it~~e~~~~~~~gs~~~~~tg 239 (717)
.. +..+..+ +|+|++|+++|.+|+||+|+|+|||+|||+++| +++++|++|+++|+++++..+ +++|
T Consensus 195 -~~-----d~~g~~~~i~~D~~A~~lA~~L~Ad~li~lTdV~GV~~~~~--~~~~lI~~i~~~e~~~l~~~~----~vtG 262 (309)
T PLN02512 195 -AA-----DEDGQAYNINADTAAGEIAAALGAEKLILLTDVAGVLEDKD--DPGSLVKELDIKGVRKLIADG----KIAG 262 (309)
T ss_pred -eE-----CCCCCEeccCHHHHHHHHHHHcCCCEEEEEeCCcceeCCCC--CCcCCCcccCHHHHHHHHhCC----CCCC
Confidence 11 2244455 899999999999999999999999999998753 347899999999998766433 7899
Q ss_pred ChHHHHHHHHHHHHcCCc-EEEEeCCCcchH-HHHhcCCcceEEEe
Q 005041 240 GMTAKVNAAYCAACAGIP-VVITSGFAMDSI-IKVLEGKRVGTLFH 283 (717)
Q Consensus 240 gM~~Kv~aa~~a~~~gi~-v~I~~g~~~~~l-~~~~tg~~iGT~i~ 283 (717)
||.+||++|..+++.|++ +||+||..++.+ .+.++++..||++.
T Consensus 263 GM~~Kl~aa~~a~~~Gv~~v~I~~g~~~~~ll~~l~~~~~~GT~I~ 308 (309)
T PLN02512 263 GMIPKVECCVRSLAQGVKTAHIIDGRVPHSLLLEILTDEGAGTMIT 308 (309)
T ss_pred cHHHHHHHHHHHHHcCCCEEEEecCCCCChHHHHHhcCCCCeeEEe
Confidence 999999999999999997 999999999987 67888888999875
No 151
>COG1608 Predicted archaeal kinase [General function prediction only]
Probab=99.97 E-value=4.7e-30 Score=250.74 Aligned_cols=240 Identities=21% Similarity=0.311 Sum_probs=176.6
Q ss_pred EEEEeCCcccccCCC--cccHHHHHHHHHHHHHHHHCCCeEEEEecChhHhhHHHHhhhhccCCCcccc-cCccccchHH
Q 005041 19 VVVKVGTAVVTRSDG--RLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADL-QKPQNELDGK 95 (717)
Q Consensus 19 iVvKiGGs~l~~~~~--~~~~~~l~~l~~~Ia~l~~~G~~vviVhGGg~~~~~~~l~~~~~~~~~~~~l-~~~~~~l~~~ 95 (717)
+|+|||||++++|+. ++..+++.+++.+|+. ..-.++|||||| ++|||...+.++. +...+. ...-..+...
T Consensus 3 ~IlKlGGSvITdK~~p~t~r~~~l~ria~eI~~--~~~~~livVHGg-GSFGHp~Ak~~~~--~~~~~~~s~~G~~~~~~ 77 (252)
T COG1608 3 IILKLGGSVITDKDKPRTVREDRLRRIAREISN--GKPEKLIVVHGG-GSFGHPAAKEFGL--EGLKNYLSPLGFSLTHL 77 (252)
T ss_pred EEEEecceeeecCCCcchhhHHHHHHHHHHHhc--CCcccEEEEecC-ccccCHHHHHhCc--cccccccCccchHHHHH
Confidence 899999999999976 5677889999999885 222368899987 6799988776543 122221 1111112223
Q ss_pred HHHHhchHHHHHHHHHHhhcCCCCccee-----EecccccCchhHhhHHHHHHHHHHhCCCeEEecCCCeeeccCCCCCC
Q 005041 96 ACAAVGQSSLMALYDTLFSQLDVTSSQL-----LVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYED 170 (717)
Q Consensus 96 ~~~a~G~~~~~~~~~~~l~~~g~~~~~~-----~~~~~d~~~~~~~~~~~~~i~~lL~~g~vPVv~g~d~v~~~~~~~~~ 170 (717)
+|..+.. .....|.+.|+.+... ...++.+. +. ..+.+.++|+.|+|||++| |++....
T Consensus 78 am~~L~~-----~V~~~l~~~Gv~av~~~P~s~~~~~gr~~----~~-~l~~i~~~l~~gfvPvl~G-DVv~d~~----- 141 (252)
T COG1608 78 AMLELNS-----IVVDALLDAGVRAVSVVPISFSTFNGRIL----YT-YLEAIKDALEKGFVPVLYG-DVVPDDD----- 141 (252)
T ss_pred HHHHHHH-----HHHHHHHhcCCccccccCcceeecCCcee----ec-hHHHHHHHHHcCCEeeeec-ceEEcCC-----
Confidence 4433333 3335566666655321 11112111 11 2578999999999999999 8777632
Q ss_pred CCCeeecchHHHHHHHhhcCCCEEEEecccCccccCCC-ccccccccccccccchhHHHhcCCCCCcccCChHHHHHHHH
Q 005041 171 SSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAY 249 (717)
Q Consensus 171 ~~~~~~~sD~~A~~lA~~L~Ad~li~lTDV~GV~~~dP-~~p~a~~i~~it~~e~~~~~~~gs~~~~~tggM~~Kv~aa~ 249 (717)
.+..++++|.++.++|..|++|+++|+|||||||+.|| +.|+.+.++++..... ..|+...++||||..|++++.
T Consensus 142 ~g~~IiSGDdIv~~LA~~l~pd~v~f~tdVdGVy~~~p~~~p~~~~l~~i~~~~~----~~gs~~~DVTGGi~~Kl~~~~ 217 (252)
T COG1608 142 NGYEIISGDDIVLHLAKELKPDRVIFLTDVDGVYDRDPGKVPDARLLSEIEGRVA----LGGSGGTDVTGGIAKKLEALL 217 (252)
T ss_pred CceEEEeccHHHHHHHHHhCCCEEEEEecCCceecCCCCcCccccchhhhhhhhh----hcCcCcccchhhHHHHHHHHH
Confidence 34456999999999999999999999999999999999 4888877777754322 245556799999999999999
Q ss_pred HHHHcCCcEEEEeCCCcchHHHHhcCCcceEEEe
Q 005041 250 CAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFH 283 (717)
Q Consensus 250 ~a~~~gi~v~I~~g~~~~~l~~~~tg~~iGT~i~ 283 (717)
...+++.+|||+||.+|++++..+.|+.+||.+.
T Consensus 218 ~~~~~~~~vyi~ng~~~~ni~~~l~G~~vGT~I~ 251 (252)
T COG1608 218 EIARYGKEVYIFNGNKPENIYRALRGENVGTRID 251 (252)
T ss_pred HHHhcCceEEEECCCCHHHHHHHhcCCCCceEec
Confidence 9999998899999999999999999999999875
No 152
>PRK14058 acetylglutamate/acetylaminoadipate kinase; Provisional
Probab=99.97 E-value=7.4e-30 Score=266.30 Aligned_cols=236 Identities=25% Similarity=0.281 Sum_probs=169.7
Q ss_pred eEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChhHhhHHHHhhhhccCCCccc------ccCcccc
Q 005041 18 RVVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLAD------LQKPQNE 91 (717)
Q Consensus 18 ~iVvKiGGs~l~~~~~~~~~~~l~~l~~~Ia~l~~~G~~vviVhGGg~~~~~~~l~~~~~~~~~~~~------l~~~~~~ 91 (717)
++||||||+++.++ ..++++|+.+++.|.++|||||||+++.+.+ +.+ +++++|.+ ++.+..+
T Consensus 1 ~~ViK~GG~~l~~~---------~~~~~~i~~l~~~g~~~VlVHGgg~~i~~~~-~~~-gi~~~~~~~~~g~~~rvt~~~ 69 (268)
T PRK14058 1 MIVVKIGGSVGIDP---------EDALIDVASLWADGERVVLVHGGSDEVNELL-ERL-GIEPRFVTSPSGVTSRYTDRE 69 (268)
T ss_pred CEEEEEChHHhhCc---------HHHHHHHHHHHHCCCCEEEEeCCHHHHHHHH-HHc-CCCceEEeCCCCCceEeCCHH
Confidence 58999999999875 3679999999999999999999988777754 333 44444433 2222211
Q ss_pred chHHHHHHhchHHHHHHHHHHhhcCCCCccee------Eec-c---------------cccCchhH-hhHHHHHHHHHHh
Q 005041 92 LDGKACAAVGQSSLMALYDTLFSQLDVTSSQL------LVT-D---------------SDFRDEDF-RKQLYDTVQSLLD 148 (717)
Q Consensus 92 l~~~~~~a~G~~~~~~~~~~~l~~~g~~~~~~------~~~-~---------------~d~~~~~~-~~~~~~~i~~lL~ 148 (717)
-......++++ +...+...|.+.|+++..+ +++ + -|+...+. ...+.+.++.+|+
T Consensus 70 ~l~~~~~a~~~--ln~~lv~~L~~~Gv~a~~l~~~~~~l~~~~~~~~~~~~~~g~~~~~d~g~~g~v~~v~~~~i~~ll~ 147 (268)
T PRK14058 70 TLEVFIMAMAL--INKQLVERLQSLGVNAVGLSGLDGGLLEGKRKKAVRVVEEGKKKIIRGDYTGKIEEVNTDLLKLLLK 147 (268)
T ss_pred HHHHHHHHHHH--HHHHHHHHHHhCCCCccccCcccCCEEEEEEecccccccCCcceeccCCceeEEEEECHHHHHHHHH
Confidence 11112234442 2223335666667654322 111 0 01111111 1234789999999
Q ss_pred CCCeEEecCCCeeeccCCCCCCCCCee-ecchHHHHHHHhhcCCCEEEEecccCccccCCCccccccccccccccchhHH
Q 005041 149 LRVIPIFNENDAVSTRKAPYEDSSGIF-WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAE 227 (717)
Q Consensus 149 ~g~vPVv~g~d~v~~~~~~~~~~~~~~-~~sD~~A~~lA~~L~Ad~li~lTDV~GV~~~dP~~p~a~~i~~it~~e~~~~ 227 (717)
+|+|||++| .++. ..+..+ +|+|++|+.+|.+|+||+|+|+|||||||++||. ++++|++|+.+|+.++
T Consensus 148 ~g~iPVi~~-~~~~-------~~g~~~~i~~D~~A~~lA~~l~A~~li~ltdv~Gv~~~~p~--~~~~i~~i~~~e~~~l 217 (268)
T PRK14058 148 AGYLPVVAP-PALS-------EEGEPLNVDGDRAAAAIAGALKAEALVLLSDVPGLLRDPPD--EGSLIERITPEEAEEL 217 (268)
T ss_pred CCCEEEEeC-ceEC-------CCCcEEecCHHHHHHHHHHHcCCCEEEEEeCChhhccCCCC--CCcCccCcCHHHHHHH
Confidence 999999997 2211 134444 9999999999999999999999999999999883 4789999999988775
Q ss_pred HhcCCCCCcccCChHHHHHHHHHHHHcCCc-EEEEeCCCcchHHHHhcCCcceEEEec
Q 005041 228 ITFGDKSRVGRGGMTAKVNAAYCAACAGIP-VVITSGFAMDSIIKVLEGKRVGTLFHR 284 (717)
Q Consensus 228 ~~~gs~~~~~tggM~~Kv~aa~~a~~~gi~-v~I~~g~~~~~l~~~~tg~~iGT~i~a 284 (717)
+. +++|||.+|+++|..++++|++ ++|+||+.++++...+.|. ||.+..
T Consensus 218 ~~------~~tGgM~~Kl~aa~~a~~~Gv~~v~I~~g~~~~~l~~~l~G~--GT~I~~ 267 (268)
T PRK14058 218 SK------AAGGGMKKKVLMAAEAVEGGVGRVIIADANVDDPISAALAGE--GTVIVN 267 (268)
T ss_pred hh------ccCCccHHHHHHHHHHHHcCCCEEEEEcCCCcchHHHHhCCC--ceEEec
Confidence 43 5799999999999999999995 9999999999998888775 998753
No 153
>PRK00942 acetylglutamate kinase; Provisional
Probab=99.97 E-value=6.9e-30 Score=269.13 Aligned_cols=240 Identities=22% Similarity=0.271 Sum_probs=179.6
Q ss_pred CCeEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChhHhhHHHHhhhhccCCCcc-cccCcc---cc
Q 005041 16 VKRVVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLA-DLQKPQ---NE 91 (717)
Q Consensus 16 ~~~iVvKiGGs~l~~~~~~~~~~~l~~l~~~Ia~l~~~G~~vviVhGGg~~~~~~~l~~~~~~~~~~~-~l~~~~---~~ 91 (717)
++++||||||+++++++ .+.+++++|+.|++.|.++|||||||+++.+.+. .. +...++. +++.++ ++
T Consensus 23 ~~~iViK~GGs~l~~~~------~~~~l~~~i~~l~~~g~~vVlVhGgg~~~~~~~~-~~-g~~~~~~~g~~~t~~~~l~ 94 (283)
T PRK00942 23 GKTIVIKYGGNAMTDEE------LKEAFARDIVLLKQVGINPVVVHGGGPQIDELLK-KL-GIESEFVNGLRVTDAETME 94 (283)
T ss_pred CCeEEEEEChHHhcCcc------hHHHHHHHHHHHHHCCCCEEEEeCChHHHHHHHH-HC-CCCcEeeCCEecCCHHHHH
Confidence 47899999999999875 2678999999999999999999999887776543 22 2222222 122221 12
Q ss_pred chHHHHHHhchHHHHHHHHHHhhcCCCCcceeEe------cccc------cCchhHh-hHHHHHHHHHHhCCCeEEecCC
Q 005041 92 LDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLV------TDSD------FRDEDFR-KQLYDTVQSLLDLRVIPIFNEN 158 (717)
Q Consensus 92 l~~~~~~a~G~~~~~~~~~~~l~~~g~~~~~~~~------~~~d------~~~~~~~-~~~~~~i~~lL~~g~vPVv~g~ 158 (717)
+.. ++..|+. ...+...|.++|+++.++.. +... +...+.. ..+.+.++.+|++|.|||+++
T Consensus 95 ~~~--~a~~G~l--~~~i~~~L~~~Gv~a~~l~~~~~~~~ta~~~~~~~~~~~~g~i~~i~~~~l~~ll~~g~vpVv~~- 169 (283)
T PRK00942 95 VVE--MVLAGKV--NKELVSLINKHGGKAVGLSGKDGGLITAKKLEEDEDLGFVGEVTPVNPALLEALLEAGYIPVISP- 169 (283)
T ss_pred HHH--HHHcCch--HHHHHHHHHhCCCCccceeeccCCEEEEEECCCCCCCccccceEEECHHHHHHHHHCCCEEEEcC-
Confidence 211 1222643 33455888888888765532 2211 1111111 134789999999999999985
Q ss_pred CeeeccCCCCCCCCCee-ecchHHHHHHHhhcCCCEEEEecccCccccCCCccccccccccccccchhHHHhcCCCCCcc
Q 005041 159 DAVSTRKAPYEDSSGIF-WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVG 237 (717)
Q Consensus 159 d~v~~~~~~~~~~~~~~-~~sD~~A~~lA~~L~Ad~li~lTDV~GV~~~dP~~p~a~~i~~it~~e~~~~~~~gs~~~~~ 237 (717)
+. ++..+..+ +|+|++|+.+|.+|+|++|+|+|||||||+++ +++|++|+++|+.++... .++
T Consensus 170 --~~-----~~~~g~~~~l~~D~~A~~lA~~l~A~~li~~tdv~Gv~~~~-----~~~i~~i~~~e~~~~~~~----~~~ 233 (283)
T PRK00942 170 --IG-----VGEDGETYNINADTAAGAIAAALGAEKLILLTDVPGVLDDK-----GQLISELTASEAEELIED----GVI 233 (283)
T ss_pred --cE-----ECCCCcEEEECHHHHHHHHHHHcCCCEEEEEECCcccccCC-----CcccccCCHHHHHHHHHc----CCC
Confidence 22 22244444 99999999999999999999999999999873 899999999999886654 378
Q ss_pred cCChHHHHHHHHHHHHcCCc-EEEEeCCCcch-HHHHhcCCcceEEEec
Q 005041 238 RGGMTAKVNAAYCAACAGIP-VVITSGFAMDS-IIKVLEGKRVGTLFHR 284 (717)
Q Consensus 238 tggM~~Kv~aa~~a~~~gi~-v~I~~g~~~~~-l~~~~tg~~iGT~i~a 284 (717)
+|||.+|+++|..++++|++ |+|+||+.+++ +.+.++++..||.+.+
T Consensus 234 tggm~~Kl~~a~~~~~~gv~~v~I~~g~~~~~ll~~~~~~~~~GT~i~~ 282 (283)
T PRK00942 234 TGGMIPKVEAALDAARGGVRSVHIIDGRVPHALLLELFTDEGIGTMIVP 282 (283)
T ss_pred CCchHHHHHHHHHHHHhCCCEEEEeCCCCCchHHHHHhcCCCcceEEec
Confidence 99999999999999999986 99999999999 7999999999999865
No 154
>PRK12352 putative carbamate kinase; Reviewed
Probab=99.97 E-value=3.7e-29 Score=262.87 Aligned_cols=257 Identities=19% Similarity=0.223 Sum_probs=183.2
Q ss_pred CCeEEEEeCCcccccCCCccc----HHHHHHHHHHHHHHHHCCCeEEEEecChhHhhHHHHhhhhccCCCcccccCcccc
Q 005041 16 VKRVVVKVGTAVVTRSDGRLA----LGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNE 91 (717)
Q Consensus 16 ~~~iVvKiGGs~l~~~~~~~~----~~~l~~l~~~Ia~l~~~G~~vviVhGGg~~~~~~~l~~~~~~~~~~~~l~~~~~~ 91 (717)
.+++||||||+++.+++...+ ..++..++++|+.|+..|+++|||||||||++..+.+ ....+.|.+++.+...
T Consensus 2 ~k~iVI~lGGnAl~~~~~~~~~~~~~~~~~~~a~dia~l~~~G~~lVivHG~GPqI~~~l~~--~~~~~~~~g~rvt~~~ 79 (316)
T PRK12352 2 KELVVVAIGGNSIIKDNASQSIEHQAEAVKAVADTVLEMLASDYDIVLTHGNGPQVGLDLRR--AEIAHEREGLPLTPLA 79 (316)
T ss_pred CcEEEEEEChHHhcCCCCCcchhhHHHHHHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHH--cCcccccCCCCCCCHH
Confidence 479999999999987543322 2578999999999999999999999999999998753 3444555445544432
Q ss_pred chHHHHHHhchHH--HHHHHHHHhhcCCCCc-----ceeEec--ccccC-------------------------------
Q 005041 92 LDGKACAAVGQSS--LMALYDTLFSQLDVTS-----SQLLVT--DSDFR------------------------------- 131 (717)
Q Consensus 92 l~~~~~~a~G~~~--~~~~~~~~l~~~g~~~-----~~~~~~--~~d~~------------------------------- 131 (717)
.....+.|..+ +...+++.|.+.|..+ .|+.++ +++|.
T Consensus 80 --~~v~~~~g~i~~~i~~~L~~~l~~~g~~~~~~vvt~v~vs~~D~~f~~~~kpiG~~y~~~~a~~~~~~~~~~~~~~d~ 157 (316)
T PRK12352 80 --NCVADTQGGIGYLIQQALNNRLARHGEKKAVTVVTQVEVDKNDPGFAHPTKPIGAFFSESQRDELQKANPDWRFVEDA 157 (316)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEECCCCccccCCcccccCcccHHHHHHHhhhcCCceEeecC
Confidence 12223333222 3345667777766322 122222 12231
Q ss_pred chhH----------hhHHHHHHHHHHhCCCeEEecCCCeeecc-CCCCCCCCCee-ecchHHHHHHHhhcCCCEEEEecc
Q 005041 132 DEDF----------RKQLYDTVQSLLDLRVIPIFNENDAVSTR-KAPYEDSSGIF-WDNDSLAGLLALELKADLLVLLSD 199 (717)
Q Consensus 132 ~~~~----------~~~~~~~i~~lL~~g~vPVv~g~d~v~~~-~~~~~~~~~~~-~~sD~~A~~lA~~L~Ad~li~lTD 199 (717)
.+++ ...+.+.|+.+|++|+|+|.+|...++.. ...+...+..+ +|+|.+|+.+|.+|+||+|||+||
T Consensus 158 g~G~rrvv~sp~pv~~V~~~~I~~ll~~g~iVi~~ggggiPv~~~~~g~~~n~~~nInaD~aAa~iA~aL~AdkLI~LTD 237 (316)
T PRK12352 158 GRGYRRVVASPEPKRIVEAPAIKALIQQGFVVIGAGGGGIPVVRTDAGDYQSVDAVIDKDLSTALLAREIHADILVITTG 237 (316)
T ss_pred CCCeEEecCCCCCceEEcHHHHHHHHHCCCEEEecCCCCCCEEeCCCCCccCceeeecHHHHHHHHHHHhCCCEEEEEeC
Confidence 1111 11457999999999999777644433321 01111123344 999999999999999999999999
Q ss_pred cCccccCCCccccccccccccccchhHHHhcCCCCCcccCChHHHHHHHHHHHHcCCc-EEEEeCCCcchHHHHhcCCcc
Q 005041 200 VEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIP-VVITSGFAMDSIIKVLEGKRV 278 (717)
Q Consensus 200 V~GV~~~dP~~p~a~~i~~it~~e~~~~~~~gs~~~~~tggM~~Kv~aa~~a~~~gi~-v~I~~g~~~~~l~~~~tg~~i 278 (717)
|+|||++++ +|++++|++++.+|+.+++..|. ...|||+||+++|..+++.|+. +||+| ++.+.+.++|+ .
T Consensus 238 V~GV~~d~~-~~~~~li~~lt~~e~~~li~~g~---i~~GgM~pKl~aA~~al~~Gv~~v~I~~---~~~i~~al~g~-~ 309 (316)
T PRK12352 238 VEKVCIHFG-KPQQQALDRVDIATMTRYMQEGH---FPPGSMLPKIIASLTFLEQGGKEVIITT---PECLPAALRGE-T 309 (316)
T ss_pred chhhccCCC-CCCcccccccCHHHHHHHHhcCC---cCCCCCHHHHHHHHHHHHhCCCeEEEcc---hHHHHHHHcCC-C
Confidence 999998765 56788999999999998876541 3368999999999999999987 99997 77889999987 8
Q ss_pred eEEEec
Q 005041 279 GTLFHR 284 (717)
Q Consensus 279 GT~i~a 284 (717)
||.+..
T Consensus 310 GT~I~~ 315 (316)
T PRK12352 310 GTHIIK 315 (316)
T ss_pred CeEEEe
Confidence 888753
No 155
>cd04250 AAK_NAGK-C AAK_NAGK-C: N-Acetyl-L-glutamate kinase - cyclic (NAGK-C) catalyzes the phosphorylation of the gamma-COOH group of N-acetyl-L-glutamate (NAG) by ATP in the second step of arginine biosynthesis found in some bacteria and photosynthetic organisms using the non-acetylated, cyclic route of ornithine biosynthesis. In this pathway, glutamate is first N-acetylated and then phosphorylated by NAGK to give phosphoryl NAG, which is converted to NAG-ornithine. There are two variants of this pathway. In one, typified by the pathway in Thermotoga maritima and Pseudomonas aeruginosa, the acetyl group is recycled by reversible transacetylation from acetylornithine to glutamate. The phosphorylation of NAG by NAGK is feedback inhibited by arginine. In photosynthetic organisms, NAGK is the target of the nitrogen-signaling protein PII. Hexameric formation of NAGK domains appears to be essential to both arginine inhibition and NAGK-PII complex formation. NAGK-C are members of the Amino A
Probab=99.97 E-value=1.9e-29 Score=265.09 Aligned_cols=241 Identities=22% Similarity=0.292 Sum_probs=176.9
Q ss_pred CCeEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChhHhhHHHHhhhhccCCCccc-ccCcc---cc
Q 005041 16 VKRVVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLAD-LQKPQ---NE 91 (717)
Q Consensus 16 ~~~iVvKiGGs~l~~~~~~~~~~~l~~l~~~Ia~l~~~G~~vviVhGGg~~~~~~~l~~~~~~~~~~~~-l~~~~---~~ 91 (717)
++++||||||++++++. ...+++++|+.+++.|.++||||||++++.+.+.+ + +...++.+ ++.++ ++
T Consensus 14 ~~~~ViKlGGs~i~~~~------~~~~~~~~i~~l~~~g~~~ViVhG~g~~~~~~l~~-~-g~~~~~~~g~r~t~~~~~~ 85 (279)
T cd04250 14 GKTVVIKYGGNAMKDEE------LKESFARDIVLLKYVGINPVVVHGGGPEINEMLKK-L-GIESEFVNGLRVTDEETME 85 (279)
T ss_pred CCEEEEEEChHHhcCcc------HHHHHHHHHHHHHHCCCCEEEEcCCcHHHHHHHHH-C-CCCCEeECCeecCCHHHHH
Confidence 37899999999999875 25789999999999999999999998877765432 2 33323222 22222 12
Q ss_pred chHHHHHHhchHHHHHHHHHHhhcCCCCcceeEe------ccc-----------ccCchhHh-hHHHHHHHHHHhCCCeE
Q 005041 92 LDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLV------TDS-----------DFRDEDFR-KQLYDTVQSLLDLRVIP 153 (717)
Q Consensus 92 l~~~~~~a~G~~~~~~~~~~~l~~~g~~~~~~~~------~~~-----------d~~~~~~~-~~~~~~i~~lL~~g~vP 153 (717)
+..++ ..|. +...+...|.+.|+++..+.. +.. ++...+.+ ..+.+.++++|+.|.||
T Consensus 86 ~~~~~--~~g~--ln~~l~~~L~~~Gv~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~i~~~~i~~ll~~g~IP 161 (279)
T cd04250 86 IVEMV--LVGK--VNKEIVSLINRAGGKAVGLSGKDGNLIKAKKKDATVIEEIIDLGFVGEVTEVNPELLETLLEAGYIP 161 (279)
T ss_pred HHHHH--HcCc--hHHHHHHHHHHcCCCcceeecCCCCEEEEEECcccccCCCcccCcccceEEEcHHHHHHHHHCCCeE
Confidence 22212 1153 333446778878877654421 111 11111111 13478999999999999
Q ss_pred EecCCCeeeccCCCCCCCCCee-ecchHHHHHHHhhcCCCEEEEecccCccccCCCccccccccccccccchhHHHhcCC
Q 005041 154 IFNENDAVSTRKAPYEDSSGIF-WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGD 232 (717)
Q Consensus 154 Vv~g~d~v~~~~~~~~~~~~~~-~~sD~~A~~lA~~L~Ad~li~lTDV~GV~~~dP~~p~a~~i~~it~~e~~~~~~~gs 232 (717)
|+++ +. .+..+..+ +|+|.+|+.+|.+|+|++|+|+|||||||+++|. ++++|++|+++|+.+++..
T Consensus 162 Vi~~---~~-----~~~~g~~~~~~~D~~A~~lA~~l~A~~li~ltdv~Gv~~~~p~--~~~~i~~i~~~e~~~l~~~-- 229 (279)
T cd04250 162 VIAP---VG-----VGEDGETYNINADTAAGAIAAALKAEKLILLTDVAGVLDDPND--PGSLISEISLKEAEELIAD-- 229 (279)
T ss_pred EEcC---Cc-----cCCCCcEEEeCHHHHHHHHHHHhCCCEEEEEECCcccccCCCC--CccccccCCHHHHHHHHHc--
Confidence 9985 12 22244445 8999999999999999999999999999999883 3789999999998876653
Q ss_pred CCCcccCChHHHHHHHHHHHHcCCc-EEEEeCCCcchH-HHHhcCCcceEEE
Q 005041 233 KSRVGRGGMTAKVNAAYCAACAGIP-VVITSGFAMDSI-IKVLEGKRVGTLF 282 (717)
Q Consensus 233 ~~~~~tggM~~Kv~aa~~a~~~gi~-v~I~~g~~~~~l-~~~~tg~~iGT~i 282 (717)
.+++|||.+|+++|..++++|++ |+|+||+.|+++ .++++++..||.+
T Consensus 230 --~~~tGgm~~Kl~~a~~a~~~g~~~v~I~~g~~~~~ll~~~~~~~~~GT~i 279 (279)
T cd04250 230 --GIISGGMIPKVEACIEALEGGVKAAHIIDGRVPHSLLLEIFTDEGIGTMI 279 (279)
T ss_pred --CCCCCchHHHHHHHHHHHHhCCCEEEEeCCCCCchHHHHHhcCCCCccCC
Confidence 37899999999999999999998 999999999976 8889988889864
No 156
>PRK05279 N-acetylglutamate synthase; Validated
Probab=99.97 E-value=2.5e-29 Score=281.29 Aligned_cols=241 Identities=17% Similarity=0.261 Sum_probs=177.6
Q ss_pred CCeEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChhHhhHHHHhhhhccCCCccc-ccCccc---c
Q 005041 16 VKRVVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLAD-LQKPQN---E 91 (717)
Q Consensus 16 ~~~iVvKiGGs~l~~~~~~~~~~~l~~l~~~Ia~l~~~G~~vviVhGGg~~~~~~~l~~~~~~~~~~~~-l~~~~~---~ 91 (717)
++++|||+||+++.++. +.+++++|+.|++.|.++|||||||+++++.+. ..++.+.|.+ ++.+.. .
T Consensus 25 ~~~~VIk~GG~~l~~~~-------~~~~~~~i~~l~~~g~~~VlVHGgg~~i~~~~~--~~g~~~~~~~G~RvT~~~~l~ 95 (441)
T PRK05279 25 GKTFVIMLGGEAIAHGN-------FSNIVHDIALLHSLGIRLVLVHGARPQIEEQLA--ARGIEPRYHKGLRVTDAAALE 95 (441)
T ss_pred CCEEEEEECchhccChh-------HHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHH--HcCCCceecCCcccCCHHHHH
Confidence 47899999999998764 689999999999999999999999999999764 3345555543 444433 3
Q ss_pred chHHHHHHhchHHHHHHHHHHhhcCCCCc-----ceeEeccc--------------ccCchhHh-hHHHHHHHHHHhCCC
Q 005041 92 LDGKACAAVGQSSLMALYDTLFSQLDVTS-----SQLLVTDS--------------DFRDEDFR-KQLYDTVQSLLDLRV 151 (717)
Q Consensus 92 l~~~~~~a~G~~~~~~~~~~~l~~~g~~~-----~~~~~~~~--------------d~~~~~~~-~~~~~~i~~lL~~g~ 151 (717)
+..++ .|+... .+...|.+ |+++ ..+...++ |+...+.+ ..+.+.|+.+|++|+
T Consensus 96 ~~~~~---~g~v~~--~l~~~l~~-g~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~v~~v~~~~i~~ll~~g~ 169 (441)
T PRK05279 96 CVKQA---AGELRL--DIEARLSM-GLPNTPMAGAHIRVVSGNFVTARPLGVDDGVDYQHTGEVRRIDAEAIRRQLDSGA 169 (441)
T ss_pred HHHHH---HHHHHH--HHHHHHhc-cCCCCcccCCcceEeeccEEEEEECCCCCCccccceeeEEEEeHHHHHHHHHCCC
Confidence 33333 343332 22344432 4332 11221111 22212211 135799999999999
Q ss_pred eEEecCCCeeeccCCCCCCCCCee-ecchHHHHHHHhhcCCCEEEEecccCccccCCCccccccccccccccchhHHHhc
Q 005041 152 IPIFNENDAVSTRKAPYEDSSGIF-WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITF 230 (717)
Q Consensus 152 vPVv~g~d~v~~~~~~~~~~~~~~-~~sD~~A~~lA~~L~Ad~li~lTDV~GV~~~dP~~p~a~~i~~it~~e~~~~~~~ 230 (717)
|||+++ ++++..|..+ +|+|.+|+.||.+|+|++|+|+|||+|||++ ++++|++|+.+++.+++..
T Consensus 170 ipV~~~--------i~~~~~g~~~ni~~D~~a~~lA~~l~a~~lv~ltdv~GV~~~-----~~~~i~~i~~~~~~~~~~~ 236 (441)
T PRK05279 170 IVLLSP--------LGYSPTGESFNLTMEEVATQVAIALKADKLIFFTESQGVLDE-----DGELIRELSPNEAQALLEA 236 (441)
T ss_pred eEEECC--------ceECCCCCEEEECHHHHHHHHHHHcCCCEEEEEECCCCccCC-----CCchhhhCCHHHHHHHHhh
Confidence 999963 1223345555 9999999999999999999999999999975 3789999999999877651
Q ss_pred CCCCCcccCChHHHHHHHHHHHHcCCc-EEEEeCCCcchH-HHHhcCCcceEEEecC
Q 005041 231 GDKSRVGRGGMTAKVNAAYCAACAGIP-VVITSGFAMDSI-IKVLEGKRVGTLFHRD 285 (717)
Q Consensus 231 gs~~~~~tggM~~Kv~aa~~a~~~gi~-v~I~~g~~~~~l-~~~~tg~~iGT~i~a~ 285 (717)
....+++|||.|||++|..++++|++ +||+|++.|+++ .++++.+..||.+..+
T Consensus 237 -~~~~~~~ggM~~Kv~~a~~~~~~gv~~v~i~~~~~~~~l~~~l~~~~g~GT~i~~~ 292 (441)
T PRK05279 237 -LEDGDYNSGTARFLRAAVKACRGGVRRSHLISYAEDGALLQELFTRDGIGTMIVME 292 (441)
T ss_pred -hhcCCCCccHHHHHHHHHHHHHcCCCEEEEecCCCCcHHHHHHhcCCCCceEEecC
Confidence 01236799999999999999999997 999999999998 6678777899999875
No 157
>TIGR01890 N-Ac-Glu-synth amino-acid N-acetyltransferase. This model represents a clade of amino-acid N-acetyltransferases acting mainly on glutamate in the first step of the "acetylated" ornithine biosynthesis pathway. For this reason it is also called N-acetylglutamate synthase. The enzyme may also act on aspartate.
Probab=99.96 E-value=1.2e-28 Score=274.46 Aligned_cols=239 Identities=19% Similarity=0.212 Sum_probs=176.2
Q ss_pred CCeEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChhHhhHHHHhhhhccCCCccc-ccCc---ccc
Q 005041 16 VKRVVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLAD-LQKP---QNE 91 (717)
Q Consensus 16 ~~~iVvKiGGs~l~~~~~~~~~~~l~~l~~~Ia~l~~~G~~vviVhGGg~~~~~~~l~~~~~~~~~~~~-l~~~---~~~ 91 (717)
++++|||+||+++.+++ +.+++++|+.|+..|.++|||||||+++++.+. ..++++.|.+ ++.+ .+.
T Consensus 17 ~~~~ViK~GG~~~~~~~-------~~~~~~~i~~l~~~g~~~vlVHGgg~~i~~~~~--~~g~~~~~~~G~RvT~~~~l~ 87 (429)
T TIGR01890 17 GKTFVVGLGGELVEGGN-------LGNIVADIALLHSLGVRLVLVHGARPQIERILA--ARGRTPHYHRGLRVTDEASLE 87 (429)
T ss_pred CCEEEEEEChhhccCcc-------HHHHHHHHHHHHHCCCcEEEEcCCCHHHHHHHH--HcCCCceeeCCcccCCHHHHH
Confidence 58999999999998765 679999999999999999999999999999764 3456555554 4433 334
Q ss_pred chHHHHHHhchHH--HHHHHHHHhhcCCCCcc-------eeEecc-------cccCchhHh-hHHHHHHHHHHhCCCeEE
Q 005041 92 LDGKACAAVGQSS--LMALYDTLFSQLDVTSS-------QLLVTD-------SDFRDEDFR-KQLYDTVQSLLDLRVIPI 154 (717)
Q Consensus 92 l~~~~~~a~G~~~--~~~~~~~~l~~~g~~~~-------~~~~~~-------~d~~~~~~~-~~~~~~i~~lL~~g~vPV 154 (717)
+..+ ..|... +...+.......++... .++... .|+...+.+ ..+.+.|+.+|++|+|||
T Consensus 88 ~~~~---~~g~vn~~l~~~l~~~~~~~~~~~~~l~~~dg~~~~a~~~~~~~~~~~g~~G~v~~v~~~~l~~ll~~g~ipv 164 (429)
T TIGR01890 88 QAQQ---AAGTLRLAIEARLSMSLSNTPMAGSRLPVVSGNFVTARPIGVIEGVDYEHTGVIRKIDTEGIRRQLDAGSIVL 164 (429)
T ss_pred HHHH---HhChHHHHHHHHHHhcCCcccccccCceEccceEEEEEECCCCcCccccccceEEEEcHHHHHHHHHCCCeEE
Confidence 4432 244433 22222222222221111 111110 122222221 146899999999999999
Q ss_pred ecCCCeeeccCCCCCCCCCee-ecchHHHHHHHhhcCCCEEEEecccCccccCCCccccccccccccccchhHHHhcCCC
Q 005041 155 FNENDAVSTRKAPYEDSSGIF-WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDK 233 (717)
Q Consensus 155 v~g~d~v~~~~~~~~~~~~~~-~~sD~~A~~lA~~L~Ad~li~lTDV~GV~~~dP~~p~a~~i~~it~~e~~~~~~~gs~ 233 (717)
+++ ++++..+..+ +|+|.+|++||.+|+|++|||+|||+|||+++ +++|++|+.+|+++++..
T Consensus 165 i~p--------i~~~~~g~~~nvnaD~~A~~lA~al~a~kli~ltdv~Gv~~~~-----g~~i~~i~~~~~~~l~~~--- 228 (429)
T TIGR01890 165 LSP--------LGHSPTGETFNLDMEDVATSVAISLKADKLIYFTLSPGISDPD-----GTLAAELSPQEVESLAER--- 228 (429)
T ss_pred ECC--------cccCCCCCEEEeCHHHHHHHHHHHcCCCEEEEEeCCCcccCCC-----CCCcccCCHHHHHHHHHh---
Confidence 974 2344456666 99999999999999999999999999999752 789999999998887753
Q ss_pred CCcccCC-hHHHHHHHHHHHHcCCc-EEEEeCCCcchH-HHHhcCCcceEEEecC
Q 005041 234 SRVGRGG-MTAKVNAAYCAACAGIP-VVITSGFAMDSI-IKVLEGKRVGTLFHRD 285 (717)
Q Consensus 234 ~~~~tgg-M~~Kv~aa~~a~~~gi~-v~I~~g~~~~~l-~~~~tg~~iGT~i~a~ 285 (717)
..+| |++|+++|..+++.|++ +||+||+.++++ .++++.+..||.+..+
T Consensus 229 ---~~~~~~~~kl~~a~~a~~~gv~~v~i~~g~~~~~l~~el~~~~g~GT~i~~d 280 (429)
T TIGR01890 229 ---LGSETTRRLLSAAVKACRGGVHRSHIVSYAEDGSLLQELFTRDGIGTSISKE 280 (429)
T ss_pred ---ccCCCcHHHHHHHHHHHHcCCCeEEEECCCCCcHHHHHHhcCCCCcceEecc
Confidence 2355 59999999999999987 999999999998 7788999999999875
No 158
>cd02115 AAK Amino Acid Kinases (AAK) superfamily, catalytic domain; present in such enzymes like N-acetylglutamate kinase (NAGK), carbamate kinase (CK), aspartokinase (AK), glutamate-5-kinase (G5K) and UMP kinase (UMPK). The AAK superfamily includes kinases that phosphorylate a variety of amino acid substrates. These kinases catalyze the formation of phosphoric anhydrides, generally with a carboxylate, and use ATP as the source of the phosphoryl group; are involved in amino acid biosynthesis. Some of these kinases control the process via allosteric feed-back inhibition.
Probab=99.96 E-value=2.4e-29 Score=260.57 Aligned_cols=239 Identities=28% Similarity=0.344 Sum_probs=182.2
Q ss_pred EEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChhHhhHHHHhhhhccCCCcc-cccCccccchHHHHH
Q 005041 20 VVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLA-DLQKPQNELDGKACA 98 (717)
Q Consensus 20 VvKiGGs~l~~~~~~~~~~~l~~l~~~Ia~l~~~G~~vviVhGGg~~~~~~~l~~~~~~~~~~~-~l~~~~~~l~~~~~~ 98 (717)
||||||++++++ +.+.+++++|+.+++.|+++||||||++++++.+.+.. ....+. ...... .....+.
T Consensus 1 ViKiGGs~l~~~------~~~~~~~~~i~~l~~~~~~~viV~ggg~~~~~~~~~~~--~~~~~~~~~~~~~--~~~~~~~ 70 (248)
T cd02115 1 VIKFGGSSVSSE------ERLRNLARILVKLASEGGRVVVVHGAGPQITDELLAHG--ELLGYARGLRITD--RETDALA 70 (248)
T ss_pred CEeeCccccCCH------HHHHHHHHHHHHHHhcCCCEEEEECCCCCcCHHHHHHH--HhhhhhhccCCCH--HHHHHHH
Confidence 799999999975 34899999999999999999999999999888765422 111111 111111 1123556
Q ss_pred HhchHHHHHHHHHHhhcCCCCcceeEec-----ccccCchhH-hhHHHHHHHHHHhCCCeEEecCCCeeeccCCCCCCCC
Q 005041 99 AVGQSSLMALYDTLFSQLDVTSSQLLVT-----DSDFRDEDF-RKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSS 172 (717)
Q Consensus 99 a~G~~~~~~~~~~~l~~~g~~~~~~~~~-----~~d~~~~~~-~~~~~~~i~~lL~~g~vPVv~g~d~v~~~~~~~~~~~ 172 (717)
+.|+..+..++...|.++|+++.++... ++++...+. .....+.++++|++|.|||++|+...... . .+
T Consensus 71 ~~~~~~~~~~~~~~l~~~gi~a~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~l~~~~ipVv~g~~~~~~~----~-~~ 145 (248)
T cd02115 71 AMGEGMSNLLIAAALEQHGIKAVPLDLTQAGFASPNQGHVGKITKVSTDRLKSLLENGILPILSGFGGTDEK----E-TG 145 (248)
T ss_pred HHHHHHHHHHHHHHHHhCCCCeEEEchHHcCeEeCCCCCcccceeeCHHHHHHHHhCCcEEEecCeEeccCC----c-ee
Confidence 6777667777889999999987765332 222221111 22346889999999999999985433210 0 12
Q ss_pred Ce-eecchHHHHHHHhhcCCCEEEEecccCccccCCCc-cccccccccccccchhHHHhcCCCCCcccCChHHHHHHHHH
Q 005041 173 GI-FWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYC 250 (717)
Q Consensus 173 ~~-~~~sD~~A~~lA~~L~Ad~li~lTDV~GV~~~dP~-~p~a~~i~~it~~e~~~~~~~gs~~~~~tggM~~Kv~aa~~ 250 (717)
.. .+++|++|+.+|.+|+|++|+|+|||||||++||+ +|++++|++|+++|+.++.. .|+|..|++++..
T Consensus 146 ~~~~~~sD~~A~~lA~~l~A~~li~~tdV~Gv~~~dP~~~~~a~~i~~i~~~e~~~l~~--------~g~~~~k~~a~~~ 217 (248)
T cd02115 146 TLGRGGSDSTAALLAAALKADRLVILTDVDGVYTADPRKVPDAKLLSELTYEEAAELAY--------AGAMVLKPKAADP 217 (248)
T ss_pred eecCCCHHHHHHHHHHHcCCCEEEEEecCCeeecCCCCcCCcCeECCcCCHHHHHHHHH--------cCCCccCHHHHHH
Confidence 22 39999999999999999999999999999999994 89999999999999887654 4679999999999
Q ss_pred HHHcCCcEEEEeCCCcchHHHHhcCCcceEEE
Q 005041 251 AACAGIPVVITSGFAMDSIIKVLEGKRVGTLF 282 (717)
Q Consensus 251 a~~~gi~v~I~~g~~~~~l~~~~tg~~iGT~i 282 (717)
++++|++++|+|+..++++ +.++++..||.+
T Consensus 218 ~~~~~~~v~I~~~~~~~~l-~~~~~~~~GT~I 248 (248)
T cd02115 218 AARAGIPVRIANTENPGAL-ALFTPDGGGTLI 248 (248)
T ss_pred HHHcCCcEEEEeCCCcccc-cccCCCCCCCCC
Confidence 9999999999999999999 989888888864
No 159
>cd04236 AAK_NAGS-Urea AAK_NAGS-Urea: N-acetylglutamate (NAG) kinase-like domain of the NAG Synthase (NAGS) of the urea cycle found in animals. Ureogenic NAGS is a mitochondrial enzyme catalyzing the formation of NAG from acetylcoenzyme A and L-glutamate; NAG is an essential allosteric activator of carbamylphosphate synthase I, the first and rate limiting enzyme of the urea cycle. Ureogenic NAGS activity is dependent on the concentration of glutamate (substrate) and arginine (activator). Domain architecture of ureogenic NAGS consists of an N-terminal NAG kinase-like (ArgB) domain (this CD) and a C-terminal DUF619 domain. Members of this CD belong to the protein superfamily, the Amino Acid Kinase Family (AAKF).
Probab=99.96 E-value=9e-29 Score=254.84 Aligned_cols=221 Identities=14% Similarity=0.083 Sum_probs=168.1
Q ss_pred CCeEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChhHhhHHHHhhhhccCCCcccccCccccchHH
Q 005041 16 VKRVVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGK 95 (717)
Q Consensus 16 ~~~iVvKiGGs~l~~~~~~~~~~~l~~l~~~Ia~l~~~G~~vviVhGGg~~~~~~~l~~~~~~~~~~~~l~~~~~~l~~~ 95 (717)
.+.+|||+||+++.+++ .++.++++|+.|++.|.++|||||||+++++.+. ...+... .|
T Consensus 35 ~~f~VIK~GG~~~~~~~------~~~~l~~dla~L~~lGl~~VlVHGggp~i~~~l~------~~~~~~~---~~----- 94 (271)
T cd04236 35 PAFAVLEVDHSVFRSLE------MVQSLSFGLAFLQRMDMKLLVVMGLSAPDGTNMS------DLELQAA---RS----- 94 (271)
T ss_pred CCEEEEEEChhhhcCch------hHHHHHHHHHHHHHCCCeEEEEeCCChHHhhhhc------CCcchhe---eh-----
Confidence 57899999999998653 3889999999999999999999999999998653 1122221 11
Q ss_pred HHHHhchHHHHHHHHHHhhcCCCCcceeE-----ec-c--cccCchhH-hhHHHHHHHHHHhCCCeEEecCCCeeeccCC
Q 005041 96 ACAAVGQSSLMALYDTLFSQLDVTSSQLL-----VT-D--SDFRDEDF-RKQLYDTVQSLLDLRVIPIFNENDAVSTRKA 166 (717)
Q Consensus 96 ~~~a~G~~~~~~~~~~~l~~~g~~~~~~~-----~~-~--~d~~~~~~-~~~~~~~i~~lL~~g~vPVv~g~d~v~~~~~ 166 (717)
.+..... .+...|++.|+++..+. +. . .|+...+. ...+.+.|+.+|++|+|||+++ +
T Consensus 95 v~~~~n~-----~Lv~~L~~~G~~A~gl~g~~~~i~a~~~~d~g~vG~V~~Vd~~~I~~lL~~g~IPVisp--------l 161 (271)
T cd04236 95 RLVKDCK-----TLVEALQANSAAAHPLFSGESVLQAEEPEPGASKGPSVSVDTELLQWCLGSGHIPLVCP--------I 161 (271)
T ss_pred hHHHHHH-----HHHHHHHhCCCCeeeecCccceEEEEEcccCCccceEEEECHHHHHHHHhCCCeEEECC--------c
Confidence 1111111 22344555555443321 11 1 12111111 1246899999999999999985 2
Q ss_pred CCCCCCCee-ecchHHHHHHHhhcCCCEEEEecccCccccCCCccccccccccccc-cchhHHHhcCCCCCcccCCh---
Q 005041 167 PYEDSSGIF-WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIR-AKHQAEITFGDKSRVGRGGM--- 241 (717)
Q Consensus 167 ~~~~~~~~~-~~sD~~A~~lA~~L~Ad~li~lTDV~GV~~~dP~~p~a~~i~~it~-~e~~~~~~~gs~~~~~tggM--- 241 (717)
+++..|..+ +|+|.+|+++|.+|+|+||||+||++|||+++ +++|++|+. +|+++++..| +++|||
T Consensus 162 g~~~~G~~~NiNaD~~A~~lA~aL~A~KLIfltd~~GV~~~~-----g~lI~~l~~~~e~~~li~~g----~i~gGm~~k 232 (271)
T cd04236 162 GETSSGRSVSLDSSEVTTAIAKALQPIKVIFLNRSGGLRDQK-----HKVLPQVHLPADLPSLSDAE----WLSETEQNR 232 (271)
T ss_pred eECCCCCEEEECHHHHHHHHHHHcCCCEEEEEeCCcceECCC-----CCCccccCcHHHHHHHHhCC----EEcCCeeec
Confidence 334456667 99999999999999999999999999999853 789999995 8999988865 889999
Q ss_pred HHHHHHHHHHHHcCCcEEEEeCCCcchH-HHHhcCCcceEE
Q 005041 242 TAKVNAAYCAACAGIPVVITSGFAMDSI-IKVLEGKRVGTL 281 (717)
Q Consensus 242 ~~Kv~aa~~a~~~gi~v~I~~g~~~~~l-~~~~tg~~iGT~ 281 (717)
+||+++|+.++.+|++|+|++ ++.+ .++++.+..||.
T Consensus 233 i~ki~~~l~~l~~g~sv~I~~---~~~ll~elft~~g~GT~ 270 (271)
T cd04236 233 IQDIATLLNALPSMSSAVITS---AETLLTELFSHKGSGTL 270 (271)
T ss_pred hHHHHHHHHhcccCCeEEEeC---hHHHHHHHhccCCCCCc
Confidence 999999999999999999998 7777 889999888985
No 160
>PRK12686 carbamate kinase; Reviewed
Probab=99.96 E-value=3.6e-28 Score=253.45 Aligned_cols=256 Identities=22% Similarity=0.307 Sum_probs=179.4
Q ss_pred cCCeEEEEeCCcccccCCCc--ccHHHHHHHHHHHHHHHHCCCeEEEEecChhHhhHHHHhhhhccCCCcccccCccccc
Q 005041 15 NVKRVVVKVGTAVVTRSDGR--LALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNEL 92 (717)
Q Consensus 15 ~~~~iVvKiGGs~l~~~~~~--~~~~~l~~l~~~Ia~l~~~G~~vviVhGGg~~~~~~~l~~~~~~~~~~~~l~~~~~~l 92 (717)
|++++|||+||+++.+++.+ ....+++.++++|+.|.+.|+++||+||+|||+|..+++..... +. ....+.|
T Consensus 1 ~~~~iVialGGnAl~~~~~~~~~q~~~~~~~a~~ia~l~~~g~~~vi~HGnGPQVg~~~~~~~~~~-~~----~~~~~pl 75 (312)
T PRK12686 1 MKEKIVIALGGNAILQTEATAEAQQTAVREAAQHLVDLIEAGHDIVITHGNGPQVGNLLLQQAESN-SN----KVPAMPL 75 (312)
T ss_pred CCCEEEEEcChHhhCCCCCChHHHHHHHHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHhcc-cc----CCCCCCh
Confidence 45789999999999986532 33567899999999999999999999999999997655322211 11 1223445
Q ss_pred hHHHHHHhchHHHH--HHHHHHhhcCCCCc------ceeEecccc--cC----------------------------c--
Q 005041 93 DGKACAAVGQSSLM--ALYDTLFSQLDVTS------SQLLVTDSD--FR----------------------------D-- 132 (717)
Q Consensus 93 ~~~~~~a~G~~~~~--~~~~~~l~~~g~~~------~~~~~~~~d--~~----------------------------~-- 132 (717)
....+.+-|..+++ ..+.+.|...+... .|+++...| |. +
T Consensus 76 ~~~~a~sqg~iGy~~~q~l~~~l~~r~~~~~v~~vvtqv~Vd~~d~af~~ptk~ig~~~~~~~a~~~~~~~g~~~~~d~~ 155 (312)
T PRK12686 76 DTCVAMSQGMIGYWLQNALNNELTERGIDKPVITLVTQVEVDKDDPAFANPTKPIGPFYTEEEAKQQAEQPGSTFKEDAG 155 (312)
T ss_pred hhhhhhccchhhHHHHHHHHHHHHhcCCCCCceEEEEEEEECCCChhhcCCCCCccCccCHHHHHHHHHHcCCcccccCC
Confidence 55555666666653 34456665555321 122221111 10 0
Q ss_pred hhHhh----------HHHHHHHHHHhCCCeEEecCCCeeeccCCCCCCCCCe-eecchHHHHHHHhhcCCCEEEEecccC
Q 005041 133 EDFRK----------QLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGI-FWDNDSLAGLLALELKADLLVLLSDVE 201 (717)
Q Consensus 133 ~~~~~----------~~~~~i~~lL~~g~vPVv~g~d~v~~~~~~~~~~~~~-~~~sD~~A~~lA~~L~Ad~li~lTDV~ 201 (717)
+++++ .+.+.|+.||++|+|||.+|+..++...-.....+.. ++|+|++|+.||.+|+||+|+|+||||
T Consensus 156 ~G~rrvV~sP~P~~ive~~~I~~Ll~~G~IpI~~GgggIPVv~~~~~~~gv~avid~D~~Aa~LA~~L~Ad~LIiLTDVd 235 (312)
T PRK12686 156 RGYRRVVPSPKPQEIIEHDTIRTLVDGGNIVIACGGGGIPVIRDDNTLKGVEAVIDKDFASEKLAEQIDADLLIILTGVE 235 (312)
T ss_pred CCeEEeeCCCCCccccCHHHHHHHHHCCCEEEEeCCCCCCeEecCCcEEeeecccCccHHHHHHHHHcCCCEEEEEeCch
Confidence 11111 3478999999999999988743322210000001211 489999999999999999999999999
Q ss_pred ccccCCCccccccccccccccchhHHHhcCCCCCcccCChHHHHHHHHHHHHcC--CcEEEEeCCCcchHHHHhcCCcce
Q 005041 202 GLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAG--IPVVITSGFAMDSIIKVLEGKRVG 279 (717)
Q Consensus 202 GV~~~dP~~p~a~~i~~it~~e~~~~~~~gs~~~~~tggM~~Kv~aa~~a~~~g--i~v~I~~g~~~~~l~~~~tg~~iG 279 (717)
|||++ |.+|++++|++|+.+|+..++..+ .+.+|||.||+++|..+++++ .+++|++ ++.+.+.+.|+ .|
T Consensus 236 GVy~~-~~~p~ak~I~~I~~~e~~~li~~g---~~~tGGM~pKveAA~~av~~g~g~~viI~~---~~~i~~aL~G~-~G 307 (312)
T PRK12686 236 NVFIN-FNKPNQQKLDDITVAEAKQYIAEG---QFAPGSMLPKVEAAIDFVESGEGKKAIITS---LEQAKEALAGN-AG 307 (312)
T ss_pred hhccC-CCCCCCeECCccCHHHHHHHhhCC---CccCCCcHHHHHHHHHHHHhCCCCEEEEeC---chHHHHHhCCC-CC
Confidence 99996 556899999999999988877643 367899999999999999864 4588887 67777888887 79
Q ss_pred EEEe
Q 005041 280 TLFH 283 (717)
Q Consensus 280 T~i~ 283 (717)
|++.
T Consensus 308 T~I~ 311 (312)
T PRK12686 308 THIT 311 (312)
T ss_pred eEEe
Confidence 9874
No 161
>cd04252 AAK_NAGK-fArgBP AAK_NAGK-fArgBP: N-Acetyl-L-glutamate kinase (NAGK) of the fungal arginine-biosynthetic pathway (fArgBP). The nuclear-encoded, mitochondrial polyprotein precursor with an N-terminal NAGK (ArgB) domain (this CD), a central DUF619 domain, and a C-terminal reductase domain (ArgC, N-Acetylglutamate Phosphate Reductase, NAGPR). The precursor is cleaved in the mitochondria into two distinct enzymes (NAGK-DUF619 and NAGPR). Native molecular weights of these proteins indicate that the kinase is an octamer whereas the reductase is a dimer. This CD also includes some gamma-proteobacteria (Xanthomonas and Xylella) NAG kinases with an N-terminal NAGK (ArgB) domain (this CD) and a C-terminal DUF619 domain. The DUF619 domain is described as a putative distant homolog of the acetyltransferase, ArgA, predicted to function in NAG synthase association in fungi. Eukaryotic sequences have an N-terminal mitochondrial transit peptide. Members of this NAG kinase domain CD belong to th
Probab=99.96 E-value=2.1e-28 Score=252.31 Aligned_cols=229 Identities=19% Similarity=0.179 Sum_probs=165.6
Q ss_pred EEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChhHhhHHHHhhhhccCCCccc-ccCcc---ccchH
Q 005041 19 VVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLAD-LQKPQ---NELDG 94 (717)
Q Consensus 19 iVvKiGGs~l~~~~~~~~~~~l~~l~~~Ia~l~~~G~~vviVhGGg~~~~~~~l~~~~~~~~~~~~-l~~~~---~~l~~ 94 (717)
.||||||+++++. +.+++++|+.|++.|.++|||||||+++.+.+. ..+++++|.+ ++.+. +....
T Consensus 1 ~ViKiGG~~~~~~--------l~~~~~di~~l~~~g~~~VlVHGgg~~i~~~~~--~~gi~~~~~~g~RvT~~~~l~~v~ 70 (248)
T cd04252 1 AVIKVGGAIIEDD--------LDELAASLSFLQHVGLYPIVVHGAGPQLNEELE--AAGVEPEYVDGLRVTDPETLAVAR 70 (248)
T ss_pred CEEEEChhhhhcc--------HHHHHHHHHHHHHCCCcEEEEeCCCHHHHHHHH--HcCCCcEeeCCcccCCHHHHHHHH
Confidence 3899999999874 689999999999999999999999998888763 3356656654 33332 22333
Q ss_pred HHHHHhchHHHHHHHHHHhhcCCCCccee----Eec----ccccCchhHh-hHHHHHHHHHHhCCCeEEecCCCeeeccC
Q 005041 95 KACAAVGQSSLMALYDTLFSQLDVTSSQL----LVT----DSDFRDEDFR-KQLYDTVQSLLDLRVIPIFNENDAVSTRK 165 (717)
Q Consensus 95 ~~~~a~G~~~~~~~~~~~l~~~g~~~~~~----~~~----~~d~~~~~~~-~~~~~~i~~lL~~g~vPVv~g~d~v~~~~ 165 (717)
+++..+. ..+...|..+|+++..+ +.. ..|+...+.. ..+.+.++.+|+.|+|||+++ ++
T Consensus 71 ~al~~vn-----~~iv~~l~~~g~~a~~l~~~~~~a~~~~~~d~g~~G~v~~i~~~~i~~~L~~g~IPVi~p-~~----- 139 (248)
T cd04252 71 KVFLEEN-----LKLVEALERNGARARPITSGVFEAEYLDKDKYGLVGKITGVNKAPIEAAIRAGYLPILTS-LA----- 139 (248)
T ss_pred HHHHHHH-----HHHHHHHHhCCCCcccccCceEEEEECcCccCCccCceeeECHHHHHHHHHCCCeEEECC-ce-----
Confidence 3332222 22334455566554332 211 1233222222 245799999999999999986 22
Q ss_pred CCCCCCCCee-ecchHHHHHHHhhcCCCEEEEecccCccccCCCcccccccccccccc-chhHHHhcCCCCCcccCChHH
Q 005041 166 APYEDSSGIF-WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRA-KHQAEITFGDKSRVGRGGMTA 243 (717)
Q Consensus 166 ~~~~~~~~~~-~~sD~~A~~lA~~L~Ad~li~lTDV~GV~~~dP~~p~a~~i~~it~~-e~~~~~~~gs~~~~~tggM~~ 243 (717)
+++.+..+ +|+|.+|+++|.+|+|++|+|+|||+|||+++ +++|++|+.. +.++++.. .++||||++
T Consensus 140 --~~~~g~~~nvnaD~~A~~lA~aL~a~kli~ltdv~GV~~~~-----g~~i~~i~~~~~~~~l~~~----~~vtgGM~~ 208 (248)
T cd04252 140 --ETPSGQLLNVNADVAAGELARVLEPLKIVFLNETGGLLDGT-----GKKISAINLDEEYDDLMKQ----PWVKYGTKL 208 (248)
T ss_pred --ECCCCCEEEECHHHHHHHHHHHcCCCeEEEEECCcccCCCC-----CCcccccCHHHHHHHHHHc----CCcCCchHH
Confidence 22245556 99999999999999999999999999999763 7899999974 66666643 378999999
Q ss_pred HHHHHHHHHHc--CCc-EEEEeCCCcchH-HHHhcCCcceEEE
Q 005041 244 KVNAAYCAACA--GIP-VVITSGFAMDSI-IKVLEGKRVGTLF 282 (717)
Q Consensus 244 Kv~aa~~a~~~--gi~-v~I~~g~~~~~l-~~~~tg~~iGT~i 282 (717)
||++|..+.+. ++. ++|++ ++++ .++++.+..||.+
T Consensus 209 Kl~~~~~~~~~~~~~~~v~i~~---~~~ll~elf~~~g~GT~i 248 (248)
T cd04252 209 KIKEIKELLDTLPRSSSVSITS---PDDLQKELFTHSGAGTLI 248 (248)
T ss_pred HHHHHHHHHHhCCCceEEEEEC---CchHHHHHhcCCCCCccC
Confidence 99999999887 554 88888 5777 7788888888864
No 162
>PRK12454 carbamate kinase-like carbamoyl phosphate synthetase; Reviewed
Probab=99.96 E-value=1.5e-27 Score=248.18 Aligned_cols=251 Identities=23% Similarity=0.364 Sum_probs=181.4
Q ss_pred CCeEEEEeCCcccccCCCccc----HHHHHHHHHHHHHHHHCCCeEEEEecChhHhhHHHHhhhhccCCCcccccCcccc
Q 005041 16 VKRVVVKVGTAVVTRSDGRLA----LGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNE 91 (717)
Q Consensus 16 ~~~iVvKiGGs~l~~~~~~~~----~~~l~~l~~~Ia~l~~~G~~vviVhGGg~~~~~~~l~~~~~~~~~~~~l~~~~~~ 91 (717)
++++||++||++|..++.... ++++...+++|+.+.+.|++++|+||+|||+|...++..... +.....+.
T Consensus 2 ~~~ivvalgGnAl~~~~~~~~~~~q~~~v~~~a~~i~~~~~~g~~vvi~hGnGpQVG~i~~~~~~~~-----~~~~~~~p 76 (313)
T PRK12454 2 KKRIVIALGGNALLQPGEKGTAENQMKNVRKTAKQIADLIEEGYEVVITHGNGPQVGNLLLQMDAAK-----DVGIPPFP 76 (313)
T ss_pred CceEEEEeChHHhCCCCCCCcchHHHHHHHHHHHHHHHHHHcCCEEEEEECCChHHHHHHHHHHHhc-----ccCCCCCc
Confidence 378999999999998655332 358999999999999999999999999999998665422211 11122344
Q ss_pred chHHHHHHhchHHHH--HHHHHHhhcCCCCcc------eeEecccc--cCc----------h------------------
Q 005041 92 LDGKACAAVGQSSLM--ALYDTLFSQLDVTSS------QLLVTDSD--FRD----------E------------------ 133 (717)
Q Consensus 92 l~~~~~~a~G~~~~~--~~~~~~l~~~g~~~~------~~~~~~~d--~~~----------~------------------ 133 (717)
|......+.|..+.+ ..+.+.|...|+... |+.+...| |.+ .
T Consensus 77 ld~~~a~sqG~igy~l~~al~~~l~~~g~~~~v~t~~tq~~Vd~~Dpaf~~PtKpiG~~y~~~~a~~~~~~~g~~~~~d~ 156 (313)
T PRK12454 77 LDVAGAMTQGWIGYMIQQALRNELAKRGIEKQVATIVTQVIVDKNDPAFQNPTKPVGPFYDEEEAKKLAKEKGWIVKEDA 156 (313)
T ss_pred cchhhhhhhHHHHHHHHHHHHHHHHhcCCCCceEEEEEEEEECCCCccccCCCCCcCCCcCHHHHHHHHHHcCCEEEEcC
Confidence 444445555655533 345677777776431 22232211 111 1
Q ss_pred --hHh----------hHHHHHHHHHHhCCCeEEecCCCeeeccCCCCCCCCCe-----eecchHHHHHHHhhcCCCEEEE
Q 005041 134 --DFR----------KQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGI-----FWDNDSLAGLLALELKADLLVL 196 (717)
Q Consensus 134 --~~~----------~~~~~~i~~lL~~g~vPVv~g~d~v~~~~~~~~~~~~~-----~~~sD~~A~~lA~~L~Ad~li~ 196 (717)
+++ ..+.+.|+.+|++|.|||++|...++.. ++.+.. ++|+|.+|+.+|.+|+||+|+|
T Consensus 157 g~g~RrvV~SP~P~~ive~~aI~~LLe~G~IvI~~GgGGiPV~----~~~g~~~gveaViD~D~aAa~LA~~L~AD~LIi 232 (313)
T PRK12454 157 GRGWRRVVPSPDPLGIVEIEVIKALVENGFIVIASGGGGIPVI----EEDGELKGVEAVIDKDLASELLAEELNADIFII 232 (313)
T ss_pred CCceEEEeCCCCCccccCHHHHHHHHHCCCEEEEeCCCccceE----cCCCcEEeeeeecCccHHHHHHHHHcCCCEEEE
Confidence 000 0236899999999999999985433321 112221 3789999999999999999999
Q ss_pred ecccCccccCCCccccccccccccccchhHHHhcCCCCCcccCChHHHHHHHHHHHHcCCc-EEEEeCCCcchHHHHhcC
Q 005041 197 LSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIP-VVITSGFAMDSIIKVLEG 275 (717)
Q Consensus 197 lTDV~GV~~~dP~~p~a~~i~~it~~e~~~~~~~gs~~~~~tggM~~Kv~aa~~a~~~gi~-v~I~~g~~~~~l~~~~tg 275 (717)
+|||||||++ +.+|++++|++|+.+|+.+++..+ ...+|||.||+++|..++++|.. ++|++ ++.+.+.+.|
T Consensus 233 LTdVdGVy~~-~~~p~~~~i~~It~~e~~~~i~~g---~~~~GgM~pKv~AA~~~v~~gg~~a~I~~---~~~i~~aL~G 305 (313)
T PRK12454 233 LTDVEKVYLN-YGKPDQKPLDKVTVEEAKKYYEEG---HFKAGSMGPKILAAIRFVENGGKRAIIAS---LEKAVEALEG 305 (313)
T ss_pred EeCCceeeCC-CCCCCCeEccccCHHHHHHHHhcC---CcCCCChHHHHHHHHHHHHcCCCeEEECc---hHHHHHHHCC
Confidence 9999999987 447889999999999998877643 35689999999999999998755 99986 6778888888
Q ss_pred CcceEEEe
Q 005041 276 KRVGTLFH 283 (717)
Q Consensus 276 ~~iGT~i~ 283 (717)
+ .||.+.
T Consensus 306 ~-~GT~I~ 312 (313)
T PRK12454 306 K-TGTRII 312 (313)
T ss_pred C-CCeEeC
Confidence 7 799875
No 163
>cd04239 AAK_UMPK-like AAK_UMPK-like: UMP kinase (UMPK)-like, the microbial/chloroplast uridine monophosphate kinase (uridylate kinase) enzyme that catalyzes UMP phosphorylation and plays a key role in pyrimidine nucleotide biosynthesis. Regulation of this process is via feed-back control and via gene repression of carbamoyl phosphate synthetase (the first enzyme of the pyrimidine biosynthesis pathway). The UMP kinases of E. coli (Ec) and Pyrococcus furiosus (Pf) are known to function as homohexamers, with GTP and UTP being allosteric effectors. Like other related enzymes (carbamate kinase, aspartokinase, and N-acetylglutamate kinase) the E. coli and most bacterial UMPKs have a conserved, N-terminal, lysine residue proposed to function in the catalysis of the phosphoryl group transfer, whereas most archaeal UMPKs appear to lack this residue and the Pyrococcus furiosus structure has an additional Mg ion bound to the ATP molecule which is proposed to function as the catalysis instead. Als
Probab=99.96 E-value=9.9e-28 Score=245.06 Aligned_cols=227 Identities=19% Similarity=0.257 Sum_probs=170.9
Q ss_pred eEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChhHhhHHHHhhhhccCCCcccccCccccchHHHH
Q 005041 18 RVVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKAC 97 (717)
Q Consensus 18 ~iVvKiGGs~l~~~~~~~~~~~l~~l~~~Ia~l~~~G~~vviVhGGg~~~~~~~l~~~~~~~~~~~~l~~~~~~l~~~~~ 97 (717)
++|||||||++++++++++.+.+.++++.|+.+++.|++++||||||..+++.... .... .+ . .+. .+
T Consensus 1 ~iViKiGGs~l~~~~~~~~~~~i~~~a~~i~~~~~~g~~vvvV~ggG~~a~~~~~~-~~~~----~~---~--~~~--~~ 68 (229)
T cd04239 1 RIVLKLSGEALAGEGGGIDPEVLKEIAREIKEVVDLGVEVAIVVGGGNIARGYIAA-ARGM----PR---A--TAD--YI 68 (229)
T ss_pred CEEEEECcceecCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCChHHhhHHHh-hcCC----Ch---h--hHH--HH
Confidence 47999999999998778889999999999999999999999999986655664321 1111 01 0 011 22
Q ss_pred HHhchHHHHHHHHHHhhcCCCCcceeEecccccCchhHhhHHHHHHHHHHhCCCeEEecCCCeeeccCCCCCCCCCeeec
Q 005041 98 AAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWD 177 (717)
Q Consensus 98 ~a~G~~~~~~~~~~~l~~~g~~~~~~~~~~~d~~~~~~~~~~~~~i~~lL~~g~vPVv~g~d~v~~~~~~~~~~~~~~~~ 177 (717)
.+.+......++...|..+|+.+.++... ++...... .+.+.+.+++++|.|||++|+. +..+.+
T Consensus 69 ~~~~~~l~~~l~~~~l~~~Gi~a~~~~~~--~~~~~~~~-~~~~~l~~~l~~g~ipVi~g~~------------g~~~~~ 133 (229)
T cd04239 69 GMLATVMNALALQDALEKLGVKTRVMSAI--PMQGVAEP-YIRRRAIRHLEKGRIVIFGGGT------------GNPGFT 133 (229)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCEEEeCHH--HHhhhhcc-ccHHHHHHHHhCCCEEEEeCcc------------CCCCCC
Confidence 23333333334568888899888754221 11111001 1256799999999999999722 223478
Q ss_pred chHHHHHHHhhcCCCEEEEecccCccccCCCc-cccccccccccccchhHHHhcCCCCCcccCChHHHHHHHHHHHHcCC
Q 005041 178 NDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGI 256 (717)
Q Consensus 178 sD~~A~~lA~~L~Ad~li~lTDV~GV~~~dP~-~p~a~~i~~it~~e~~~~~~~gs~~~~~tggM~~Kv~aa~~a~~~gi 256 (717)
+|++|+.+|.+|+||+|+|+|||||||++||+ +|++++|++|+++|+.++.. |..|+.++..+.+.|+
T Consensus 134 sD~~A~~lA~~l~a~~li~~tdVdGvy~~dP~~~~~a~~i~~i~~~e~~~~~~-----------~~~~~~a~~~~~~~~i 202 (229)
T cd04239 134 TDTAAALRAEEIGADVLLKATNVDGVYDADPKKNPDAKKYDRISYDELLKKGL-----------KVMDATALTLCRRNKI 202 (229)
T ss_pred cHHHHHHHHHHcCCCEEEEEECCCcccCCCCCCCCCCeEEeEEcHHHHHHHhc-----------CCccHHHHHHHHHCCC
Confidence 99999999999999999999999999999995 89999999999988775321 4557788888999999
Q ss_pred cEEEEeCCCcchHHHHhcCCcceEEE
Q 005041 257 PVVITSGFAMDSIIKVLEGKRVGTLF 282 (717)
Q Consensus 257 ~v~I~~g~~~~~l~~~~tg~~iGT~i 282 (717)
+++|+||+.|+++.+.+.|+..||++
T Consensus 203 ~v~I~~g~~~~~l~~~l~g~~~GT~i 228 (229)
T cd04239 203 PIIVFNGLKPGNLLRALKGEHVGTLI 228 (229)
T ss_pred eEEEECCCChhHHHHHHcCCCCCeEe
Confidence 99999999999999999998889976
No 164
>cd04251 AAK_NAGK-UC AAK_NAGK-UC: N-Acetyl-L-glutamate kinase - uncharacterized (NAGK-UC). This domain is similar to Escherichia coli and Pseudomonas aeruginosa NAGKs which catalyze the phosphorylation of the gamma-COOH group of N-acetyl-L-glutamate (NAG) by ATP in the second step of microbial arginine biosynthesis. These uncharacterized domain sequences are found in some bacteria (Deinococci and Chloroflexi) and archea and belong to the Amino Acid Kinase Superfamily (AAK).
Probab=99.96 E-value=2.7e-28 Score=252.87 Aligned_cols=222 Identities=27% Similarity=0.341 Sum_probs=160.4
Q ss_pred EEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChhHhhHHHHhhhhccCCCcc----cc--cC---cc
Q 005041 19 VVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLA----DL--QK---PQ 89 (717)
Q Consensus 19 iVvKiGGs~l~~~~~~~~~~~l~~l~~~Ia~l~~~G~~vviVhGGg~~~~~~~l~~~~~~~~~~~----~l--~~---~~ 89 (717)
+||||||+++++ +++++++|+.+ |.++|||||||+++...+. .+ ++++.|. ++ +. .+
T Consensus 1 ~VIKlGGs~l~~---------~~~~~~~i~~l---g~~~VlVHGgg~~i~~~~~-~~-gi~~~~~~~~~G~~~Rvt~~~~ 66 (257)
T cd04251 1 IVVKIGGSVVSD---------LDKVIDDIANF---GERLIVVHGGGNYVNEYLK-RL-GVEPKFVTSPSGIRSRYTDKET 66 (257)
T ss_pred CEEEEChHHhhC---------hHHHHHHHHHc---CCCEEEECCCHHHHHHHHH-Hc-CCCcEEEeCCCCCccccCCHHH
Confidence 589999999985 36899999988 8899999999998777543 23 4444443 11 22 22
Q ss_pred ccchHHHHHHhchHHHHHHHHHHhhcCCCCcceeEe-----cccc-----------------cCchhH-hhHHHHHHHHH
Q 005041 90 NELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLV-----TDSD-----------------FRDEDF-RKQLYDTVQSL 146 (717)
Q Consensus 90 ~~l~~~~~~a~G~~~~~~~~~~~l~~~g~~~~~~~~-----~~~d-----------------~~~~~~-~~~~~~~i~~l 146 (717)
|.... .+++... ..+...|.++|+++..+.- ...+ +...+. ...+.+.++.+
T Consensus 67 l~~~~---~a~~~ln--~~iv~~L~~~Gi~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~G~v~~v~~~~i~~l 141 (257)
T cd04251 67 LEVFV---MVMGLIN--KKIVARLHSLGVKAVGLTGLDGRLLEAKRKEIVRVNERGRKMIIRGGYTGKVEKVNSDLIEAL 141 (257)
T ss_pred HHHHH---HHHHHHH--HHHHHHHHhCCCCceecccccCCEEEEEEeecccccccCcccccCCcceEEEEEEcHHHHHHH
Confidence 22222 2333322 2234566666666532211 1111 100011 12457999999
Q ss_pred HhCCCeEEecCCCeeeccCCCCCCCCCee-ecchHHHHHHHhhcCCCEEEEecccCccccCCCccccccccccccccchh
Q 005041 147 LDLRVIPIFNENDAVSTRKAPYEDSSGIF-WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQ 225 (717)
Q Consensus 147 L~~g~vPVv~g~d~v~~~~~~~~~~~~~~-~~sD~~A~~lA~~L~Ad~li~lTDV~GV~~~dP~~p~a~~i~~it~~e~~ 225 (717)
|++|+|||+++ . .++..+..+ +|+|++|+.+|.+|+||+|+|+|||+|||++ +++|++|+++|++
T Consensus 142 l~~g~vpVi~~--~------~~~~~G~~~~i~~D~~A~~lA~~L~A~~li~~tdv~Gv~~~------~~~i~~i~~~e~~ 207 (257)
T cd04251 142 LDAGYLPVVSP--V------AYSEEGEPLNVDGDRAAAAIAAALKAERLILLTDVEGLYLD------GRVIERITVSDAE 207 (257)
T ss_pred HhCCCeEEEeC--c------EECCCCcEEecCHHHHHHHHHHHcCCCEEEEEeCChhheeC------CcccCccCHHHHH
Confidence 99999999974 1 223345555 9999999999999999999999999999975 7899999999988
Q ss_pred HHHhcCCCCCcccCChHHHHHHHHHHHHcCCc-EEEEeCCCcchHHHHhcCCcceEE
Q 005041 226 AEITFGDKSRVGRGGMTAKVNAAYCAACAGIP-VVITSGFAMDSIIKVLEGKRVGTL 281 (717)
Q Consensus 226 ~~~~~gs~~~~~tggM~~Kv~aa~~a~~~gi~-v~I~~g~~~~~l~~~~tg~~iGT~ 281 (717)
+++. +++|||.+|+++|..++++|++ +||+||+.|+++...+.|+ ||.
T Consensus 208 ~l~~------~~~ggm~~Kl~aa~~a~~~gv~~v~i~~g~~~~~l~~~l~g~--gT~ 256 (257)
T cd04251 208 SLLE------KAGGGMKRKLLAAAEAVEGGVREVVIGDARADSPISSALNGG--GTV 256 (257)
T ss_pred HHHh------hCCCchHHHHHHHHHHHHcCCCEEEEecCCCccHHHHHHcCC--CcC
Confidence 7662 5799999999999999999997 9999999999998888774 764
No 165
>cd04238 AAK_NAGK-like AAK_NAGK-like: N-Acetyl-L-glutamate kinase (NAGK)-like . Included in this CD are the Escherichia coli and Pseudomonas aeruginosa type NAGKs which catalyze the phosphorylation of N-acetyl-L-glutamate (NAG) by ATP in the second step of arginine biosynthesis found in bacteria and photosynthetic organisms using either the acetylated, noncyclic (NC), or non-acetylated, cyclic (C) route of ornithine biosynthesis. Also included in this CD is a distinct group of uncharacterized (UC) bacterial and archeal NAGKs. Members of this CD belong to the Amino Acid Kinase Superfamily (AAK).
Probab=99.95 E-value=6.2e-28 Score=250.82 Aligned_cols=234 Identities=24% Similarity=0.323 Sum_probs=168.0
Q ss_pred EEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChhHhhHHHHhhhhccCCCccc-ccC---ccccchH
Q 005041 19 VVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLAD-LQK---PQNELDG 94 (717)
Q Consensus 19 iVvKiGGs~l~~~~~~~~~~~l~~l~~~Ia~l~~~G~~vviVhGGg~~~~~~~l~~~~~~~~~~~~-l~~---~~~~l~~ 94 (717)
+||||||++++++. .+.+++++|+.+++.|.++||||||++++.. +++.+. ...++.+ ++. ..+...
T Consensus 1 ~ViKlGGs~l~~~~------~~~~~~~~i~~l~~~g~~~VlVhG~g~~~~~-~~~~~~-~~~~~~~~~r~t~~~~l~~~- 71 (256)
T cd04238 1 VVIKYGGSAMKDEE------LKEAFADDIVLLKQVGINPVIVHGGGPEINE-LLKRLG-IESEFVNGLRVTDKETMEIV- 71 (256)
T ss_pred CEEEEChHHhcCcc------HHHHHHHHHHHHHHCCCCEEEECCCcHHHHH-HHHHCC-CCCEeECCeecCCHHHHHHH-
Confidence 58999999999875 3689999999999999999999998775444 444332 2222222 222 111221
Q ss_pred HHHHHh-chHHHHHHHHHHhhcCCCCcceeE------eccc-------ccCchhHh-hHHHHHHHHHHhCCCeEEecCCC
Q 005041 95 KACAAV-GQSSLMALYDTLFSQLDVTSSQLL------VTDS-------DFRDEDFR-KQLYDTVQSLLDLRVIPIFNEND 159 (717)
Q Consensus 95 ~~~~a~-G~~~~~~~~~~~l~~~g~~~~~~~------~~~~-------d~~~~~~~-~~~~~~i~~lL~~g~vPVv~g~d 159 (717)
..++ |. +...+...|.+.|+++..+. ++.. |+...+.. ..+.+.++.+|++|+|||+++
T Consensus 72 --~~a~~g~--ln~~i~~~L~~~Gv~a~~l~~~~~~~~~~~~~~~~~~~~~~~g~i~~i~~~~l~~ll~~g~ipVv~~-- 145 (256)
T cd04238 72 --EMVLAGK--VNKELVSLLNRAGGKAVGLSGKDGGLIKAEKKEEKDIDLGFVGEVTEVNPELLETLLEAGYIPVIAP-- 145 (256)
T ss_pred --HHHHcCc--hHHHHHHHHHhCCCCCCCcccccCCEEEEEECCCCCCCcccccceEEECHHHHHHHHHCCCEEEECC--
Confidence 2223 53 23334677777777654332 2211 11111111 234789999999999999985
Q ss_pred eeeccCCCCCCCCCe-eecchHHHHHHHhhcCCCEEEEecccCccccCCCccccccccccccccchhHHHhcCCCCCccc
Q 005041 160 AVSTRKAPYEDSSGI-FWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGR 238 (717)
Q Consensus 160 ~v~~~~~~~~~~~~~-~~~sD~~A~~lA~~L~Ad~li~lTDV~GV~~~dP~~p~a~~i~~it~~e~~~~~~~gs~~~~~t 238 (717)
+.. +..+.. ++|+|++|+.+|.+|+||+|+|+|||+|||++ | +++|++|+.+|+.+++.. .+++
T Consensus 146 -~~~-----~~~g~~~~~~~D~~A~~lA~~l~a~~li~ltdv~Gv~~~-~----~~~i~~i~~~e~~~~~~~----~~~~ 210 (256)
T cd04238 146 -IAV-----DEDGETYNVNADTAAGAIAAALKAEKLILLTDVPGVLDD-P----GSLISELTPKEAEELIED----GVIS 210 (256)
T ss_pred -cEE-----CCCCcEEEECHHHHHHHHHHHcCCCEEEEEeCCccccCC-C----CCccccCCHHHHHHHHHc----CCCC
Confidence 222 223444 49999999999999999999999999999987 2 789999999998876643 3679
Q ss_pred CChHHHHHHHHHHHHcCCc-EEEEeCCCcchHHHHhcC-CcceEEE
Q 005041 239 GGMTAKVNAAYCAACAGIP-VVITSGFAMDSIIKVLEG-KRVGTLF 282 (717)
Q Consensus 239 ggM~~Kv~aa~~a~~~gi~-v~I~~g~~~~~l~~~~tg-~~iGT~i 282 (717)
|||.+|+++|..++++|++ |+|+||+.++++...+.+ +..||.+
T Consensus 211 ggm~~Kl~~a~~~~~~g~~~v~I~~g~~~~~l~~~l~~~~~~GT~i 256 (256)
T cd04238 211 GGMIPKVEAALEALEGGVRKVHIIDGRVPHSLLLELFTDEGIGTMI 256 (256)
T ss_pred CChHHHHHHHHHHHHhCCCEEEEeCCCCCcHHHHHHhcCCCCCCCC
Confidence 9999999999999999886 999999999999776655 6678753
No 166
>PRK00358 pyrH uridylate kinase; Provisional
Probab=99.95 E-value=2.1e-27 Score=243.11 Aligned_cols=227 Identities=19% Similarity=0.292 Sum_probs=165.4
Q ss_pred CeEEEEeCCcccccCCC-cccHHHHHHHHHHHHHHHHCCCeEEEEecChhHhhHHHHhhhhccCCCcccccCccccchHH
Q 005041 17 KRVVVKVGTAVVTRSDG-RLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGK 95 (717)
Q Consensus 17 ~~iVvKiGGs~l~~~~~-~~~~~~l~~l~~~Ia~l~~~G~~vviVhGGg~~~~~~~l~~~~~~~~~~~~l~~~~~~l~~~ 95 (717)
+++|||||||+++++.. +++.+.+.+++++|+.+++.|+++|||||||. +.+.+..... + +... .+...
T Consensus 1 ~~iViK~GGs~l~~~~~~~~~~~~i~~~~~~i~~~~~~g~~vvlV~gGG~-~a~~~~~~~~----~---~~~~--~~~~~ 70 (231)
T PRK00358 1 KRVLLKLSGEALAGEKGFGIDPEVLDRIAEEIKEVVELGVEVAIVVGGGN-IFRGYIGAAA----G---MDRA--TADYM 70 (231)
T ss_pred CeEEEEeccceecCCCCCCCCHHHHHHHHHHHHHHHHCCCeEEEEECCCH-HHHHHHHhhc----C---CChh--hHHHH
Confidence 46899999999997542 57888899999999999999999999999864 4443321101 1 1111 11111
Q ss_pred HHHHhchHHHHHHHHHHhhcCCCCcceeEecccccCch-hHhhHHHHHHHHHHhCCCeEEecCCCeeeccCCCCCCCCCe
Q 005041 96 ACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDE-DFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGI 174 (717)
Q Consensus 96 ~~~a~G~~~~~~~~~~~l~~~g~~~~~~~~~~~d~~~~-~~~~~~~~~i~~lL~~g~vPVv~g~d~v~~~~~~~~~~~~~ 174 (717)
+ +.+......++...|..+|+++. ++.. ..+... ..+ ..+.+.++|++|.|||++|. .+..
T Consensus 71 ~--~~~~~l~~~ll~~~l~~~Gi~a~-~~~~-~~~~~~~~~~--~~~~~~~~l~~g~vPVv~g~------------~~~~ 132 (231)
T PRK00358 71 G--MLATVMNALALQDALERAGVDTR-VQSA-IPMPQVAEPY--IRRRAIRHLEKGRVVIFAAG------------TGNP 132 (231)
T ss_pred H--HHHHHHHHHHHHHHHHHcCCCeE-Eech-hhcccccCcc--cHHHHHHHHHCCCEEEEECC------------CCCC
Confidence 1 12222222255688999998775 2211 111100 011 13567899999999999751 1222
Q ss_pred eecchHHHHHHHhhcCCCEEEEecccCccccCCCc-cccccccccccccchhHHHhcCCCCCcccCChHHHHHHHHHHHH
Q 005041 175 FWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAAC 253 (717)
Q Consensus 175 ~~~sD~~A~~lA~~L~Ad~li~lTDV~GV~~~dP~-~p~a~~i~~it~~e~~~~~~~gs~~~~~tggM~~Kv~aa~~a~~ 253 (717)
+.++|++|+.+|.+|+||+|+++|||||||++||+ +|++++|++|+++|+.+. | ....|++++..+.+
T Consensus 133 ~~ssD~~A~~lA~~l~A~~li~~tdVdGVy~~dP~~~~~a~~i~~i~~~e~~~~---g--------~~~~d~~a~~~a~~ 201 (231)
T PRK00358 133 FFTTDTAAALRAEEIGADVLLKATNVDGVYDADPKKDPDAKKYDRLTYDEVLEK---G--------LKVMDATAISLARD 201 (231)
T ss_pred CCCchHHHHHHHHHcCCCEEEEeeCcCceEcCCCCCCCCCEEeeEecHHHHHHc---C--------CcchhHHHHHHHHH
Confidence 47899999999999999999999999999999995 899999999998875432 2 22358899999999
Q ss_pred cCCcEEEEeCCCcchHHHHhcCCcceEEE
Q 005041 254 AGIPVVITSGFAMDSIIKVLEGKRVGTLF 282 (717)
Q Consensus 254 ~gi~v~I~~g~~~~~l~~~~tg~~iGT~i 282 (717)
+|++++|+||++|+++.+.+.|+..||++
T Consensus 202 ~~i~v~I~~g~~~~~l~~~l~g~~~GT~i 230 (231)
T PRK00358 202 NKIPIIVFNMNKPGNLKRVVKGEHIGTLV 230 (231)
T ss_pred cCCcEEEECCCCchHHHHHHCCCCCCEEe
Confidence 99999999999999999999998889986
No 167
>cd04249 AAK_NAGK-NC AAK_NAGK-NC: N-Acetyl-L-glutamate kinase - noncyclic (NAGK-NC) catalyzes the phosphorylation of the gamma-COOH group of N-acetyl-L-glutamate (NAG) by ATP in the second step of microbial arginine biosynthesis using the acetylated, noncyclic route of ornithine biosynthesis. There are two variants of this pathway. In one, typified by the pathway in Escherichia coli, glutamate is acetylated by acetyl-CoA and acetylornithine is deacylated hydrolytically. In this pathway, feedback inhibition by arginine occurs at the initial acetylation of glutamate and not at the phosphorylation of NAG by NAGK. Homodimeric NAGK-NC are members of the Amino Acid Kinase Superfamily (AAK).
Probab=99.95 E-value=9.1e-28 Score=248.87 Aligned_cols=236 Identities=24% Similarity=0.254 Sum_probs=166.0
Q ss_pred EEEEeCCcccccCCCcccHHHHHHHHHHHHHHHH-CCCeEEEEecChhHhhHHHHhhhhccCCCccc-ccCccccchHHH
Q 005041 19 VVVKVGTAVVTRSDGRLALGRLGALLEQLKELNS-QGFEIILVSSGAVGVGRQRLRYRKLVNSSLAD-LQKPQNELDGKA 96 (717)
Q Consensus 19 iVvKiGGs~l~~~~~~~~~~~l~~l~~~Ia~l~~-~G~~vviVhGGg~~~~~~~l~~~~~~~~~~~~-l~~~~~~l~~~~ 96 (717)
+||||||+++++++ .+.+++++|+.++. .|.++|||||||+++++.+ +.. +.++.|.+ ++.+........
T Consensus 1 ~ViK~GGs~l~~~~------~~~~~~~~i~~~~~~~~~~iVlVhGgg~~~~~~~-~~~-g~~~~~~~g~rvt~~~~l~~~ 72 (252)
T cd04249 1 LVIKLGGALLETEA------ALEQLFSALSEYQQQHNRQLVIVHGGGCVVDELL-KKL-NFPSEKKNGLRVTPKEQIPYI 72 (252)
T ss_pred CEEEEChHHhcChh------hHHHHHHHHHHHHHhCCCCEEEECCCCHHHHHHH-HHc-CCCCEEECCEecCCHHHHHHH
Confidence 48999999998763 47899999998854 5788999999999777654 333 33333332 322211100111
Q ss_pred HHHh-chHHHHHHHHHHhhcCCCCcceeE------eccc----ccCchhHh-hHHHHHHHHHHhCCCeEEecCCCeeecc
Q 005041 97 CAAV-GQSSLMALYDTLFSQLDVTSSQLL------VTDS----DFRDEDFR-KQLYDTVQSLLDLRVIPIFNENDAVSTR 164 (717)
Q Consensus 97 ~~a~-G~~~~~~~~~~~l~~~g~~~~~~~------~~~~----d~~~~~~~-~~~~~~i~~lL~~g~vPVv~g~d~v~~~ 164 (717)
..++ |+. ...+...+.++|+++..+. ++.. |+...+.. ..+.+.++.+|++|+|||+++ ..
T Consensus 73 ~~~~~~~~--n~~lv~~l~~~Gv~a~~l~~~~~~~~~~~~~~~~~~~~G~v~~i~~~~l~~ll~~g~ipVi~~-~g---- 145 (252)
T cd04249 73 TGALAGTA--NKQLMAQAIKAGLKPVGLSLADGGMTAVTQLDPELGAVGKATANDPSLLNDLLKAGFLPIISS-IG---- 145 (252)
T ss_pred HHHHcCcc--cHHHHHHHHhCCCCceeeeccCCCEEEEEEcCCCCCcccceEEEcHHHHHHHHHCCCEEEECC-CE----
Confidence 1222 222 1122233346776655432 2211 33222222 245789999999999999985 22
Q ss_pred CCCCCCCCCee-ecchHHHHHHHhhcCCCEEEEecccCccccCCCccccccccccccccchhHHHhcCCCCCcccCChHH
Q 005041 165 KAPYEDSSGIF-WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTA 243 (717)
Q Consensus 165 ~~~~~~~~~~~-~~sD~~A~~lA~~L~Ad~li~lTDV~GV~~~dP~~p~a~~i~~it~~e~~~~~~~gs~~~~~tggM~~ 243 (717)
++..+..+ +|+|++|+.+|.+|+|+ ++|+|||+|||++| +++|++|+.+|+++++..+ +++|||.+
T Consensus 146 ---~~~~g~~~~~~~D~~A~~lA~~l~A~-~i~ltdv~Gv~~~~-----~~~i~~i~~~e~~~~~~~g----~~~gGm~~ 212 (252)
T cd04249 146 ---ADDQGQLMNVNADQAATAIAQLLNAD-LVLLSDVSGVLDAD-----KQLISELNAKQAAELIEQG----VITDGMIV 212 (252)
T ss_pred ---ECCCCCEeeecHHHHHHHHHHHcCCC-EEEEeCCcccCCCC-----CcCccccCHHHHHHHHhcC----CCcCCcHH
Confidence 22244445 99999999999999999 78999999999875 4799999999988776543 78999999
Q ss_pred HHHHHHHHHHcC-CcEEEEeCCCcchHHHHhcCCcceEEE
Q 005041 244 KVNAAYCAACAG-IPVVITSGFAMDSIIKVLEGKRVGTLF 282 (717)
Q Consensus 244 Kv~aa~~a~~~g-i~v~I~~g~~~~~l~~~~tg~~iGT~i 282 (717)
|+++|..+++.+ +++||+||+.++.+.+.++|+..||.+
T Consensus 213 kl~~a~~~~~~~~~~v~I~~g~~~~~l~~~l~g~~~GT~I 252 (252)
T cd04249 213 KVNAALDAAQSLRRGIDIASWQYPEQLTALLAGEPVGTKI 252 (252)
T ss_pred HHHHHHHHHHhCCCeEEEEeCCCccHHHHHHcCCCCCcCC
Confidence 999999998876 459999999999999999999888864
No 168
>cd04234 AAK_AK AAK_AK: Amino Acid Kinase Superfamily (AAK), Aspartokinase (AK); this CD includes the N-terminal catalytic domain of aspartokinase (4-L-aspartate-4-phosphotransferase;). AK is the first enzyme in the biosynthetic pathway of the aspartate family of amino acids (lysine, threonine, methionine, and isoleucine) and the bacterial cell wall component, meso-diaminopimelate. It also catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP. One mechanism for the regulation of this pathway is by the production of several isoenzymes of aspartokinase with different repressors and allosteric inhibitors. Pairs of ACT domains are proposed to specifically bind amino acids leading to allosteric regulation of the enzyme. In Escherichia coli, three different aspartokinase isoenzymes are regulated specifically by lysine, methionine, and threonine. AK-HSDHI (ThrA) and AK-HSDHII (MetL) are bifunctional enzymes that consist of an N-terminal AK and a C-terminal homoserine dehyd
Probab=99.95 E-value=1.3e-27 Score=243.61 Aligned_cols=208 Identities=22% Similarity=0.288 Sum_probs=168.8
Q ss_pred eEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChhHhhHHHHhhhhccCCCcccccCccccchHHHH
Q 005041 18 RVVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKAC 97 (717)
Q Consensus 18 ~iVvKiGGs~l~~~~~~~~~~~l~~l~~~Ia~l~~~G~~vviVhGGg~~~~~~~l~~~~~~~~~~~~l~~~~~~l~~~~~ 97 (717)
++|+|||||++.+. +.+.++++.|+.+ +.|+++||||||++.+++.+++.. .+
T Consensus 1 ~iViK~GGs~l~~~------~~~~~~~~~i~~l-~~g~~vvvV~Sg~~~~t~~l~~~~--------------------~~ 53 (227)
T cd04234 1 MVVQKFGGTSVASA------ERIKRVADIIKAY-EKGNRVVVVVSAMGGVTDLLIELA--------------------LL 53 (227)
T ss_pred CEEEEECccccCCH------HHHHHHHHHHHHh-hcCCCEEEEEcCCCcccHHHHHHH--------------------HH
Confidence 47999999999875 3589999999999 889999999999999998765421 46
Q ss_pred HHhchHHHHHHHHHHhhcCCCCcc-----eeEeccccc-CchhHhhHHHHHHHHHHhC-CCeEEecCCCeeeccCCCCCC
Q 005041 98 AAVGQSSLMALYDTLFSQLDVTSS-----QLLVTDSDF-RDEDFRKQLYDTVQSLLDL-RVIPIFNENDAVSTRKAPYED 170 (717)
Q Consensus 98 ~a~G~~~~~~~~~~~l~~~g~~~~-----~~~~~~~d~-~~~~~~~~~~~~i~~lL~~-g~vPVv~g~d~v~~~~~~~~~ 170 (717)
.++|+..++.++...|..+|+++. ++.++..++ .....+..+.+.+++++++ |.|||++|+-+.. .
T Consensus 54 ~s~Ge~~~~~l~~~~l~~~Gi~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~vpVv~g~i~~~-------~ 126 (227)
T cd04234 54 LSFGERLSARLLAAALRDRGIKARSLDARQAGITTDDNHGAARIIEISYERLKELLAEIGKVPVVTGFIGRN-------E 126 (227)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCeEEeCHHHCCEEcCCccchhhHHHHHHHHHHHHHhhCCCEEEecCceecC-------C
Confidence 789999888889999999998876 444555554 2233344567899999999 9999998722111 1
Q ss_pred CCCe--e--ecchHHHHHHHhhcCCCEEEEecccCccccCCCc-cccccccccccccchhHHHhcCCCCCcccCChHHHH
Q 005041 171 SSGI--F--WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKV 245 (717)
Q Consensus 171 ~~~~--~--~~sD~~A~~lA~~L~Ad~li~lTDV~GV~~~dP~-~p~a~~i~~it~~e~~~~~~~gs~~~~~tggM~~Kv 245 (717)
.+.. + +++|++|+.+|.+|+||+|+++|||||||+.||+ +|++++|++|+++|+.++...| .++| |+
T Consensus 127 ~g~~~~l~rg~sD~~A~~lA~~l~A~~l~~~tdV~Gvy~~dP~~~~~a~~i~~i~~~e~~~l~~~G------~~~~--~~ 198 (227)
T cd04234 127 DGEITTLGRGGSDYSAAALAAALGADEVEIWTDVDGIYTADPRIVPEARLIPEISYDEALELAYFG------AKVL--HP 198 (227)
T ss_pred CCCEEEeeCCCcHHHHHHHHHHhCCCEEEEEECCCccCCCCCCCCCCceEcCcCCHHHHHHHHhCC------cccc--CH
Confidence 2322 2 4799999999999999999999999999999995 8999999999999998766533 4555 67
Q ss_pred HHHHHHHHcCCcEEEEeCCCcc
Q 005041 246 NAAYCAACAGIPVVITSGFAMD 267 (717)
Q Consensus 246 ~aa~~a~~~gi~v~I~~g~~~~ 267 (717)
+++..+.++|+|++|.|++.|+
T Consensus 199 ~a~~~a~~~~i~i~i~~~~~~~ 220 (227)
T cd04234 199 RAVEPARKANIPIRVKNTFNPE 220 (227)
T ss_pred HHHHHHHHcCCeEEEEeCCCCC
Confidence 8999999999999999999885
No 169
>cd04246 AAK_AK-DapG-like AAK_AK-DapG-like: Amino Acid Kinase Superfamily (AAK), AK-DapG-like; this CD includes the N-terminal catalytic aspartokinase (AK) domain of the diaminopimelate-sensitive aspartokinase isoenzyme AKI (DapG), a monofunctional enzymes found in Bacilli (Bacillus subtilis 168), Clostridia, and Actinobacteria bacterial species, as well as, the catalytic AK domain of the lysine-sensitive aspartokinase isoenzyme AKII of Bacillus subtilis 168, the lysine plus threonine-sensitive aspartokinase of Corynebacterium glutamicum, and related isoenzymes. In Bacillus subtilis, the regulation of the diaminopimelate-lysine biosynthetic pathway involves dual control by diaminopimelate and lysine, effected through separate diaminopimelate- and lysine-sensitive aspartokinase isoenzymes. The role of the AKI isoenzyme is most likely to provide a constant level of aspartyl-beta-phosphate for the biosynthesis of diaminopimelate for peptidoglycan synthesis and dipicolinate during sporulati
Probab=99.95 E-value=1.5e-27 Score=245.50 Aligned_cols=222 Identities=19% Similarity=0.263 Sum_probs=169.4
Q ss_pred eEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChhHhhHHHHhhhhccCCCcccccCccccchHHHH
Q 005041 18 RVVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKAC 97 (717)
Q Consensus 18 ~iVvKiGGs~l~~~~~~~~~~~l~~l~~~Ia~l~~~G~~vviVhGGg~~~~~~~l~~~~~~~~~~~~l~~~~~~l~~~~~ 97 (717)
.+||||||+++.+. +.+++++++|+.+++.|+++||||||++..+..+++..+.. ..+.+.+ ..+.+
T Consensus 1 ~iViK~GGs~l~~~------~~~~~~~~~i~~l~~~g~~~viV~sg~g~~~~~ll~~~~~~-~~~~~~~------~~~~i 67 (239)
T cd04246 1 IIVQKFGGTSVADI------ERIKRVAERIKKAVKKGYQVVVVVSAMGGTTDELIGLAKEV-SPRPSPR------ELDML 67 (239)
T ss_pred CEEEEECccccCCH------HHHHHHHHHHHHHHHcCCCEEEEECCCCchHHHHHHHHHHh-ccCCCHH------HHHHH
Confidence 37999999999974 35899999999999999999999997666666555543321 1111111 23467
Q ss_pred HHhchHHHHHHHHHHhhcCCCCccee------EecccccCchhHhhHHHHHHHHHHhCCCeEEecCCCeeeccCCCCCCC
Q 005041 98 AAVGQSSLMALYDTLFSQLDVTSSQL------LVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDS 171 (717)
Q Consensus 98 ~a~G~~~~~~~~~~~l~~~g~~~~~~------~~~~~d~~~~~~~~~~~~~i~~lL~~g~vPVv~g~d~v~~~~~~~~~~ 171 (717)
.++|+..++.++...|..+|+++..+ +++...+.+......+.+.+++++++|.|||++|+-+ ....
T Consensus 68 ~~~Ge~~~~~~~~~~l~~~g~~a~~l~~~~~~l~~~~~~~~~~~~~~~~~~l~~ll~~g~ipVi~g~~~-------~~~~ 140 (239)
T cd04246 68 LSTGEQISAALLAMALNRLGIKAISLTGWQAGILTDDHHGNARIIDIDPKRILEALEEGDVVVVAGFQG-------VNED 140 (239)
T ss_pred HHHhHHHHHHHHHHHHHhCCCCeEEeccccCCEEecCCCCceeechhhHHHHHHHHhcCCEEEEcCccc-------cCCC
Confidence 78898877778889999999887544 2333334322222345689999999999999987211 1112
Q ss_pred CCee----ecchHHHHHHHhhcCCCEEEEecccCccccCCCc-cccccccccccccchhHHHhcCCCCCcccCChHHHHH
Q 005041 172 SGIF----WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVN 246 (717)
Q Consensus 172 ~~~~----~~sD~~A~~lA~~L~Ad~li~lTDV~GV~~~dP~-~p~a~~i~~it~~e~~~~~~~gs~~~~~tggM~~Kv~ 246 (717)
+... +++|++|+.+|.+|+|++|+++|||||||++||+ +|++++|++|+++|+.++... |.+..|++
T Consensus 141 g~~~~l~~g~~D~~A~~lA~~l~A~~li~~tdV~GVy~~dP~~~~~a~~i~~l~~~e~~~l~~~--------G~~~~~~~ 212 (239)
T cd04246 141 GEITTLGRGGSDTTAVALAAALKADRCEIYTDVDGVYTADPRIVPKARKLDVISYDEMLEMASL--------GAKVLHPR 212 (239)
T ss_pred CCEEecCCCChHHHHHHHHHHcCCCEEEEEECCCCCCCCCCCCCCCCeEcccCCHHHHHHHHhC--------CCcccCHH
Confidence 3222 4899999999999999999999999999999995 799999999999999876543 45678999
Q ss_pred HHHHHHHcCCcEEEEeCCCcc
Q 005041 247 AAYCAACAGIPVVITSGFAMD 267 (717)
Q Consensus 247 aa~~a~~~gi~v~I~~g~~~~ 267 (717)
++..+.++|+|++|.|+++|+
T Consensus 213 a~~~a~~~gi~i~i~~~~~~~ 233 (239)
T cd04246 213 SVELAKKYNVPLRVRSSFSEN 233 (239)
T ss_pred HHHHHHHCCCeEEEecCCCCC
Confidence 999999999999999998773
No 170
>TIGR00761 argB acetylglutamate kinase. This model describes N-acetylglutamate kinases (ArgB) of many prokaryotes and the N-acetylglutamate kinase domains of multifunctional proteins from yeasts. This enzyme is the second step in the "acetylated" ornithine biosynthesis pathway. A related group of enzymes representing the first step of the pathway contain a homologous domain and are excluded from this model.
Probab=99.95 E-value=1.6e-27 Score=243.96 Aligned_cols=213 Identities=26% Similarity=0.320 Sum_probs=154.0
Q ss_pred eEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChhHhhHHHHhhhhccCCCccc-ccCcc---ccch
Q 005041 18 RVVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLAD-LQKPQ---NELD 93 (717)
Q Consensus 18 ~iVvKiGGs~l~~~~~~~~~~~l~~l~~~Ia~l~~~G~~vviVhGGg~~~~~~~l~~~~~~~~~~~~-l~~~~---~~l~ 93 (717)
++||||||+++.++ +.+++++|+.|++.|.++||||||++++...+ +.. +....+.+ ++.+. +...
T Consensus 1 ~~ViK~GGs~l~~~--------~~~~~~~i~~l~~~g~~~VlVhggg~~~~~~~-~~~-~~~~~~~~g~r~t~~~~~~~~ 70 (231)
T TIGR00761 1 TIVIKIGGAAISDL--------LEAFASDIAFLRAVGIKPVIVHGGGPEINELL-EAL-GIPPEFKNGLRVTDKETLEVV 70 (231)
T ss_pred CEEEEEChHHHhcc--------HHHHHHHHHHHHHcCCCEEEEcCCcHHHHHHH-HHc-CCCCEecCCCccCCHHHHHHH
Confidence 58999999999975 68999999999999999999999988666543 333 22222322 22211 1111
Q ss_pred HHHHHHhchHHHHHHHHHHhhcCCCCccee------Eeccc-----ccCchhHh-hHHHHHHHHHHhCCCeEEecCCCee
Q 005041 94 GKACAAVGQSSLMALYDTLFSQLDVTSSQL------LVTDS-----DFRDEDFR-KQLYDTVQSLLDLRVIPIFNENDAV 161 (717)
Q Consensus 94 ~~~~~a~G~~~~~~~~~~~l~~~g~~~~~~------~~~~~-----d~~~~~~~-~~~~~~i~~lL~~g~vPVv~g~d~v 161 (717)
. ++..|+. ...+...|..+|+++.++ +++.. |+...+.. ..+.+.++++|++|+|||++| .
T Consensus 71 ~--~~~~g~~--~~~i~~~L~~~G~~a~~l~~~~~~~it~~~~~~~~~~~~g~i~~i~~~~i~~~l~~g~IPVi~~-~-- 143 (231)
T TIGR00761 71 E--MVLIGQV--NKELVALLNKHGINAIGLTGGDGQLFTARSLDKEDLGYVGEIKKVNKALLEALLKAGYIPVISS-L-- 143 (231)
T ss_pred H--HHHhcch--HHHHHHHHHhCCCCcccccCCCCCEEEEEECCCccCCcccceEEEcHHHHHHHHHCCCeEEECC-C--
Confidence 1 1224432 234446787888776644 23322 22222221 234789999999999999997 1
Q ss_pred eccCCCCCCCCCee-ecchHHHHHHHhhcCCCEEEEecccCccccCCCccccccccccccccchhHHHhcCCCCCcccCC
Q 005041 162 STRKAPYEDSSGIF-WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGG 240 (717)
Q Consensus 162 ~~~~~~~~~~~~~~-~~sD~~A~~lA~~L~Ad~li~lTDV~GV~~~dP~~p~a~~i~~it~~e~~~~~~~gs~~~~~tgg 240 (717)
+.+..+..+ +|+|++|+.+|.+|+|++|+|+|||||||++|| +++|++|+.+|+.+++..+ ++|||
T Consensus 144 -----~~~~~g~~~~l~sD~~A~~lA~~l~A~~li~ltdv~Gv~~~d~----~~~i~~i~~~e~~~l~~~~----~~tgg 210 (231)
T TIGR00761 144 -----ALTAEGQALNVNADTAAGALAAALGAEKLVLLTDVPGILNGDG----QSLISEIPLEEIEQLIEQG----IITGG 210 (231)
T ss_pred -----ccCCCCcEEEeCHHHHHHHHHHHcCCCEEEEEECCCCeecCCC----CeeccccCHHHHHHHHHcC----CCCCc
Confidence 122244444 999999999999999999999999999999976 4799999999988876543 68999
Q ss_pred hHHHHHHHHHHHHcCCc-EEE
Q 005041 241 MTAKVNAAYCAACAGIP-VVI 260 (717)
Q Consensus 241 M~~Kv~aa~~a~~~gi~-v~I 260 (717)
|.+||++|..+++.|++ +||
T Consensus 211 m~~Kl~~a~~a~~~gv~~v~i 231 (231)
T TIGR00761 211 MIPKVNAALEALRGGVKSVHI 231 (231)
T ss_pred hHHHHHHHHHHHHcCCCEEEC
Confidence 99999999999999998 775
No 171
>PRK14558 pyrH uridylate kinase; Provisional
Probab=99.95 E-value=4.5e-27 Score=240.39 Aligned_cols=223 Identities=23% Similarity=0.342 Sum_probs=168.1
Q ss_pred CeEEEEeCCcccccCCC-cccHHHHHHHHHHHHHHHHCCCeEEEEecChhHhhHHHHhhhhccCCCcccccCccccchHH
Q 005041 17 KRVVVKVGTAVVTRSDG-RLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGK 95 (717)
Q Consensus 17 ~~iVvKiGGs~l~~~~~-~~~~~~l~~l~~~Ia~l~~~G~~vviVhGGg~~~~~~~l~~~~~~~~~~~~l~~~~~~l~~~ 95 (717)
+++|||+|||+++++++ +++.+.+.+++++|+.+++.|+++|||||||. +.+... ..+. .. .
T Consensus 1 ~riviKlGgs~lt~~~~~~~~~~~i~~la~~i~~~~~~g~~viiV~GgGs-~~~g~~--~~~~-------~~-------~ 63 (231)
T PRK14558 1 KRVLLKLSGEALSGEGEKGFDPERVNYLVNEIKSVVEYGFKIGIVIGAGN-LFRGVE--LKEL-------SP-------T 63 (231)
T ss_pred CeEEEEeeHHHccCCCCCCcCHHHHHHHHHHHHHHHHCCCeEEEEECccH-HHHHHh--ccCC-------Ch-------H
Confidence 46899999999999854 68999999999999999999999999997744 433110 0111 00 0
Q ss_pred HHHHhchH--HHHH-HHHHHhhcCCCCccee--EecccccCchhHhhHHHHHHHHHHhCCCeEEecCCCeeeccCCCCCC
Q 005041 96 ACAAVGQS--SLMA-LYDTLFSQLDVTSSQL--LVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYED 170 (717)
Q Consensus 96 ~~~a~G~~--~~~~-~~~~~l~~~g~~~~~~--~~~~~d~~~~~~~~~~~~~i~~lL~~g~vPVv~g~d~v~~~~~~~~~ 170 (717)
....+|+. .+.. ++...|..+|+++..+ ++...++. ....+.+.++|+.|.|||++||.
T Consensus 64 ~~d~ig~~~~~ln~~~~~~~l~~~gi~a~~~~~~~~~~~~~-----~~~~~~i~~ll~~g~vpV~~G~~----------- 127 (231)
T PRK14558 64 RADQIGMLGTVINALYLKDIFEKSGLKAVIVSQIVNLPSVE-----PINYDDIELYFRAGYIVIFAGGT----------- 127 (231)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCeEEeccccccchhh-----hhhHHHHHHHHHCCCEEEEECCC-----------
Confidence 11123331 1222 4578999999886422 12222221 12357899999999999999842
Q ss_pred CCCeeecchHHHHHHHhhcCCCEEEEecccCccccCCC-ccccccccccccccchhHHHhcCCCCCcccCChHHHHHHHH
Q 005041 171 SSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAY 249 (717)
Q Consensus 171 ~~~~~~~sD~~A~~lA~~L~Ad~li~lTDV~GV~~~dP-~~p~a~~i~~it~~e~~~~~~~gs~~~~~tggM~~Kv~aa~ 249 (717)
+..++++|++|+.+|.+|+||.|+++|||||||++|| ++|++++|++|+++|+.++ + ... .+.+++.
T Consensus 128 -~~~~~~~D~~a~~lA~~l~a~~l~~~tdVdGvy~~dP~~~~~a~~i~~i~~~e~~~~---g------~~~--~d~~a~~ 195 (231)
T PRK14558 128 -SNPFFTTDTAAALRAVEMKADILIKATKVDGIYDKDPKKFPDAKKIDHLTFSEAIKM---G------LKV--MDTEAFS 195 (231)
T ss_pred -CCCCCCcHHHHHHHHHHcCCCEEEEEecCCeeEccCCCCCCCCeEcccccHHHHHHc---C------ccc--ccHHHHH
Confidence 1224789999999999999999999999999999999 5999999999998887652 2 122 3567888
Q ss_pred HHHHcCCcEEEEeCCCcchHHHHhcCCcceEEEec
Q 005041 250 CAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHR 284 (717)
Q Consensus 250 ~a~~~gi~v~I~~g~~~~~l~~~~tg~~iGT~i~a 284 (717)
.|.++|++++|+|+++++.+.+.+.|+..||++.+
T Consensus 196 ~a~~~gi~v~I~ng~~~~~l~~~l~g~~~GT~i~~ 230 (231)
T PRK14558 196 ICKKYGITILVINFFEPGNLLKALKGENVGTLVVP 230 (231)
T ss_pred HHHHCCCCEEEEeCCCCCHHHHHHCCCCCcEEeCC
Confidence 88899999999999999999999999989999864
No 172
>cd04261 AAK_AKii-LysC-BS AAK_AKii-LysC-BS: Amino Acid Kinase Superfamily (AAK), AKii; this CD includes the N-terminal catalytic aspartokinase (AK) domain of the lysine-sensitive aspartokinase isoenzyme AKII of Bacillus subtilis 168, and the lysine plus threonine-sensitive aspartokinase of Corynebacterium glutamicum, and related sequences. In B. subtilis 168, the regulation of the diaminopimelate (Dap)-lysine biosynthetic pathway involves dual control by Dap and lysine, effected through separate Dap- and lysine-sensitive aspartokinase isoenzymes. The B. subtilis 168 AKII is induced by methionine, and repressed and inhibited by lysine. Although Corynebacterium glutamicum is known to contain a single aspartokinase isoenzyme type, both the succinylase and dehydrogenase variant pathways of DAP-lysine synthesis operate simultaneously in this organism. In this organism and other various Gram-positive bacteria, the DAP-lysine pathway is feedback regulated by the concerted action of lysine and
Probab=99.95 E-value=3.8e-27 Score=242.33 Aligned_cols=222 Identities=19% Similarity=0.281 Sum_probs=168.7
Q ss_pred eEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChhHhhHHHHhhhhccCCCcccccCccccchHHHH
Q 005041 18 RVVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKAC 97 (717)
Q Consensus 18 ~iVvKiGGs~l~~~~~~~~~~~l~~l~~~Ia~l~~~G~~vviVhGGg~~~~~~~l~~~~~~~~~~~~l~~~~~~l~~~~~ 97 (717)
.+||||||+++.+. +.+.+++++|+.+++.|+++||||||++..+..+++...... +..+. -..+++
T Consensus 1 ~iViK~GGs~l~~~------~~~~~~~~~i~~l~~~g~~~vvV~sg~g~~~~~l~~~~~~~~---~~~~~----~~~~~i 67 (239)
T cd04261 1 LIVQKFGGTSVASI------ERIKRVAERIKKRKKKGNQVVVVVSAMGGTTDELIELAKEIS---PRPPA----RELDVL 67 (239)
T ss_pred CEEEEECCcccCCH------HHHHHHHHHHHHHHHcCCCEEEEECCCCchhHHHHHHHHHhc---cCCCH----HHHHHH
Confidence 47999999999864 358999999999999999999999997767766654322110 00111 123467
Q ss_pred HHhchHHHHHHHHHHhhcCCCCccee------EecccccCchhHhhHHHHHHHHHHhCCCeEEecCCCeeeccCCCCCCC
Q 005041 98 AAVGQSSLMALYDTLFSQLDVTSSQL------LVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDS 171 (717)
Q Consensus 98 ~a~G~~~~~~~~~~~l~~~g~~~~~~------~~~~~d~~~~~~~~~~~~~i~~lL~~g~vPVv~g~d~v~~~~~~~~~~ 171 (717)
.++|+...+.++...|..+|+++..+ +++.+++........+.+.+++++++|.|||++|+-+. ...
T Consensus 68 ~a~Ge~~~~~l~~~~l~~~g~~a~~l~~~~~~l~~~~~~~~~~i~~~~~~~l~~ll~~~~ipVi~G~~~~-------~~~ 140 (239)
T cd04261 68 LSTGEQVSIALLAMALNRLGIKAISLTGWQAGILTDGHHGKARIIDIDPDRIRELLEEGDVVIVAGFQGI-------NED 140 (239)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCeEEechhhCCEEecCCCCcceechhhHHHHHHHHHcCCeEEEcCcccc-------CCC
Confidence 78898888778889999998875432 33444543222222346899999999999999873111 112
Q ss_pred CCee----ecchHHHHHHHhhcCCCEEEEecccCccccCCCc-cccccccccccccchhHHHhcCCCCCcccCChHHHHH
Q 005041 172 SGIF----WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVN 246 (717)
Q Consensus 172 ~~~~----~~sD~~A~~lA~~L~Ad~li~lTDV~GV~~~dP~-~p~a~~i~~it~~e~~~~~~~gs~~~~~tggM~~Kv~ 246 (717)
+... +++|++|+.+|.+|+||+|+++|||||||++||+ +|++++|++|+++|+.++... |.++.|++
T Consensus 141 g~~~~l~rg~sD~~A~~lA~~l~A~~lii~tdV~GVy~~dP~~~~~a~~i~~i~~~ea~~l~~~--------G~~~~~~~ 212 (239)
T cd04261 141 GDITTLGRGGSDTSAVALAAALGADRCEIYTDVDGVYTADPRIVPKARKLDEISYDEMLEMASL--------GAKVLHPR 212 (239)
T ss_pred CCEEecCCCChHHHHHHHHHHcCCCEEEEEeCCCCCCCCCCCCCCCceEccccCHHHHHHHHhc--------cccccCHH
Confidence 3322 4999999999999999999999999999999995 899999999999999876543 45688999
Q ss_pred HHHHHHHcCCcEEEEeCCCcc
Q 005041 247 AAYCAACAGIPVVITSGFAMD 267 (717)
Q Consensus 247 aa~~a~~~gi~v~I~~g~~~~ 267 (717)
++..+.++|+|++|.|+++|+
T Consensus 213 a~~~~~~~~i~i~I~n~~~~~ 233 (239)
T cd04261 213 SVELAKKYGVPLRVLSSFSEE 233 (239)
T ss_pred HHHHHHHcCCeEEEecCCCCC
Confidence 999999999999999998873
No 173
>cd04235 AAK_CK AAK_CK: Carbamate kinase (CK) catalyzes both the ATP-phosphorylation of carbamate and carbamoyl phosphate (CP) utilization with the production of ATP from ADP and CP. Both CK (this CD) and nonhomologous CP synthetase synthesize carbamoyl phosphate, an essential precursor of arginine and pyrimidine bases, in the presence of ATP, bicarbonate, and ammonia. CK is a homodimer of 33 kDa subunits and is a member of the Amino Acid Kinase Superfamily (AAK).
Probab=99.95 E-value=4.2e-27 Score=245.41 Aligned_cols=251 Identities=25% Similarity=0.344 Sum_probs=175.9
Q ss_pred eEEEEeCCcccccCCC----cccHHHHHHHHHHHHHHHHCCCeEEEEecChhHhhHHHHhhhhccCCCcccccCccccch
Q 005041 18 RVVVKVGTAVVTRSDG----RLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELD 93 (717)
Q Consensus 18 ~iVvKiGGs~l~~~~~----~~~~~~l~~l~~~Ia~l~~~G~~vviVhGGg~~~~~~~l~~~~~~~~~~~~l~~~~~~l~ 93 (717)
++||||||++|..+++ ..+.+++...+++|+.+.+.|++++||||+|||+|...++..... .. ...+.|.
T Consensus 1 rivialgGnal~~~~~~~~~~~q~~~~~~~a~~i~~l~~~g~~vvi~hGnGPqvG~i~~~~~~~~----~~--~~~~pld 74 (308)
T cd04235 1 RIVVALGGNALLRRGEPGTAEEQRENVKIAAKALADLIKNGHEVVITHGNGPQVGNLLLQNEAAA----EK--VPAYPLD 74 (308)
T ss_pred CEEEEecHHHhCCCCCCCCCCccHHHHHHHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHHhcc----cc--CCCCCcc
Confidence 4899999999987654 456789999999999999999999999999999998765432210 00 1112222
Q ss_pred HHHHHHhchHHH--HHHHHHHhhcCCCCcc------eeEecccc--cC----------c--------------------h
Q 005041 94 GKACAAVGQSSL--MALYDTLFSQLDVTSS------QLLVTDSD--FR----------D--------------------E 133 (717)
Q Consensus 94 ~~~~~a~G~~~~--~~~~~~~l~~~g~~~~------~~~~~~~d--~~----------~--------------------~ 133 (717)
.......|+.+. ...+.+.|...|+... |..+...| |. + +
T Consensus 75 ~~~a~~~G~ig~~~~~al~~~l~~~~~~~~v~t~~t~~~V~~~dpaf~~ptKpiG~~y~~~~a~~~~~~~g~~~~~d~~~ 154 (308)
T cd04235 75 VCGAMSQGMIGYMLQQALDNELPKRGIDKPVVTLVTQVVVDANDPAFKNPTKPIGPFYSEEEAEELAAEKGWTFKEDAGR 154 (308)
T ss_pred hhcchhhHHHHHHHHHHHHHHHHHcCCCCceEEEEeEEEEcCCCccccCCCCCcCCCcCHHHHHHHHHHcCCEEEEeCCC
Confidence 223334444432 2455677777776432 22222111 11 1 0
Q ss_pred hHh----------hHHHHHHHHHHhCCCeEEecCCCeeeccCCCCCCCCC-eeecchHHHHHHHhhcCCCEEEEecccCc
Q 005041 134 DFR----------KQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSG-IFWDNDSLAGLLALELKADLLVLLSDVEG 202 (717)
Q Consensus 134 ~~~----------~~~~~~i~~lL~~g~vPVv~g~d~v~~~~~~~~~~~~-~~~~sD~~A~~lA~~L~Ad~li~lTDV~G 202 (717)
+++ ..+.+.++.||++|+|||++|+..++...-.....+. .++|+|++|+.+|.+|+||+|+++|||||
T Consensus 155 g~rrvV~SP~P~~iv~~~~I~~Ll~~g~IpI~~GggGiPv~~~~~~~~gveaVid~D~~AallA~~l~Ad~LiilTdVdG 234 (308)
T cd04235 155 GYRRVVPSPKPKDIVEIEAIKTLVDNGVIVIAAGGGGIPVVREGGGLKGVEAVIDKDLASALLAEEINADLLVILTDVDN 234 (308)
T ss_pred CceeeeCCCCCccccCHHHHHHHHHCCCEEEEECCCccCEEEcCCceeeeeeccCccHHHHHHHHHcCCCEEEEEecCCe
Confidence 011 0235789999999999999985433321000000111 13889999999999999999999999999
Q ss_pred cccCCCccccccccccccccchhHHHhcCCCCCcccCChHHHHHHHHHHHHcC-CcEEEEeCCCcchHHHHhcCCcceEE
Q 005041 203 LYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAG-IPVVITSGFAMDSIIKVLEGKRVGTL 281 (717)
Q Consensus 203 V~~~dP~~p~a~~i~~it~~e~~~~~~~gs~~~~~tggM~~Kv~aa~~a~~~g-i~v~I~~g~~~~~l~~~~tg~~iGT~ 281 (717)
||++++ +|++++|++|+++|+.+++..+ .+.+|||.||+++|.++++.| .+++|++ ++.+.+.+.|+ .||.
T Consensus 235 Vy~~~~-~pda~~i~~Is~~e~~~l~~~g---~~~tGGM~pKv~aA~~~a~~gg~~v~I~~---~~~i~~aL~G~-~GT~ 306 (308)
T cd04235 235 VYINFG-KPNQKALEQVTVEELEKYIEEG---QFAPGSMGPKVEAAIRFVESGGKKAIITS---LENAEAALEGK-AGTV 306 (308)
T ss_pred EECCCC-CCCCeEcCCcCHHHHHHHHhcC---ccccCCcHHHHHHHHHHHHhCCCeEEECC---HHHHHHHHCCC-CCeE
Confidence 999754 6899999999999988876543 467999999999999988876 4599987 67788888887 6887
Q ss_pred E
Q 005041 282 F 282 (717)
Q Consensus 282 i 282 (717)
+
T Consensus 307 I 307 (308)
T cd04235 307 I 307 (308)
T ss_pred E
Confidence 6
No 174
>PLN02825 amino-acid N-acetyltransferase
Probab=99.95 E-value=3.9e-27 Score=262.04 Aligned_cols=247 Identities=19% Similarity=0.228 Sum_probs=184.3
Q ss_pred CCeEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChhHhhHHHHhhhhccCCCccc-ccCccccchH
Q 005041 16 VKRVVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLAD-LQKPQNELDG 94 (717)
Q Consensus 16 ~~~iVvKiGGs~l~~~~~~~~~~~l~~l~~~Ia~l~~~G~~vviVhGGg~~~~~~~l~~~~~~~~~~~~-l~~~~~~l~~ 94 (717)
++++||||||+++.++. +.+++.+|+.|+..|.++||||||++++++.+. ..++++.|.+ ++.++.+...
T Consensus 17 gktfVIk~gG~~l~~~~-------~~~l~~DialL~~lGi~~VlVHGggpqI~~~l~--~~gi~~~f~~G~RVTd~~~L~ 87 (515)
T PLN02825 17 GSTFVVVISGEVVAGPH-------LDNILQDISLLHGLGIKFVLVPGTHVQIDKLLA--ERGREPKYVGAYRITDSAALQ 87 (515)
T ss_pred CCEEEEEECchhhcCch-------HHHHHHHHHHHHHCCCCEEEEcCCCHHHHHHHH--HcCCCceeeCCcccCCHHHHH
Confidence 68999999999998753 799999999999999999999999999999763 4567777765 5544422222
Q ss_pred HHHHHhchHHHH--HHH-----HHHhhcCCCCc----ceeEeccc--------------ccCchhHh-hHHHHHHHHHHh
Q 005041 95 KACAAVGQSSLM--ALY-----DTLFSQLDVTS----SQLLVTDS--------------DFRDEDFR-KQLYDTVQSLLD 148 (717)
Q Consensus 95 ~~~~a~G~~~~~--~~~-----~~~l~~~g~~~----~~~~~~~~--------------d~~~~~~~-~~~~~~i~~lL~ 148 (717)
..+.+.|..... +.+ ...|+.+|.++ ..+...++ |+...+.+ .++.+.|+.+|+
T Consensus 88 ~~~~~~G~v~~~i~a~Ls~~~~v~~l~~~G~~a~~~~~gl~~~~Gn~v~a~~~gv~dgvD~g~vG~V~~Vd~~~i~~~L~ 167 (515)
T PLN02825 88 ASMEAAGKIRVMIEAKLSPGPSIPNLRRHGDNSRWHEVGVSVASGNFLAAKRRGVVNGVDFGATGEVKKIDVSRIKERLD 167 (515)
T ss_pred HHHHHHHHHHHHHHHhhccccchhHHHhcCCCCccccCceEeccCcEEEEEECCCCcCccccceeeEEEEcHHHHHHHHh
Confidence 234556655432 222 12355666654 33322222 33222221 256899999999
Q ss_pred CCCeEEecCCCeeeccCCCCCCCCCee-ecchHHHHHHHhhcCCCEEEEecccCccccCCCccccccccccccccchhHH
Q 005041 149 LRVIPIFNENDAVSTRKAPYEDSSGIF-WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAE 227 (717)
Q Consensus 149 ~g~vPVv~g~d~v~~~~~~~~~~~~~~-~~sD~~A~~lA~~L~Ad~li~lTDV~GV~~~dP~~p~a~~i~~it~~e~~~~ 227 (717)
+|.|||+++ ++++..|..| +|+|.+|+++|.+|+||||||+||++ ++++ ++++|++|+.+|++++
T Consensus 168 ~g~Ipvisp--------lg~s~~Ge~~NinaD~vA~avA~aL~A~KLI~ltd~~-~~~~-----~g~li~~l~~~e~~~l 233 (515)
T PLN02825 168 SNCIVLLSN--------LGYSSSGEVLNCNTYEVATACALAIGADKLICIVDGP-ILDE-----NGRLIRFMTLEEADML 233 (515)
T ss_pred CCCeEEECC--------ceECCCCCEEeeCHHHHHHHHHHHcCCCeEEEEeCcc-eecC-----CCCCcCcCCHHHHHHH
Confidence 999999974 4566677778 99999999999999999999999977 5554 2789999999999887
Q ss_pred HhcCCCC----------------------C-------------------------------c------------------
Q 005041 228 ITFGDKS----------------------R-------------------------------V------------------ 236 (717)
Q Consensus 228 ~~~gs~~----------------------~-------------------------------~------------------ 236 (717)
+..++.. . .
T Consensus 234 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (515)
T PLN02825 234 IRKRAKQSEIAANYVKAVGGEDYSYSLGLDSVNTTPFNNNGRGFWGSGSATDSFQNGVGFDNGNGLSGEQGFAIGGEERL 313 (515)
T ss_pred HHhhhhcchhhhhhhhhccccccccccccccccccccccccccccccccccccccccccccCcccccccccccccchhhc
Confidence 7531000 0 1
Q ss_pred -ccCChHHHHHHHHHHHHcCCc-EEEEeCCCcchH-HHHhcCCcceEEEecC
Q 005041 237 -GRGGMTAKVNAAYCAACAGIP-VVITSGFAMDSI-IKVLEGKRVGTLFHRD 285 (717)
Q Consensus 237 -~tggM~~Kv~aa~~a~~~gi~-v~I~~g~~~~~l-~~~~tg~~iGT~i~a~ 285 (717)
.+.+...|+.+|..||+.||+ +|++|++.++.+ .++||.+.+||.+..+
T Consensus 314 ~~~~~~~~~l~~a~~a~~~gv~r~hl~~~~~~gall~elft~dg~gt~i~~~ 365 (515)
T PLN02825 314 SRLNGYLSELAAAAFVCRGGVQRVHLLDGTIEGVLLLELFTRDGMGTMIASD 365 (515)
T ss_pred hhhhhHHHHHHHHHHHHHcCCCeEEeccCCCCchHHHHhhccCCceeEeccC
Confidence 123355679999999999999 999999999999 9999999999999866
No 175
>cd04255 AAK_UMPK-MosAB AAK_UMPK-MosAB: This CD includes the alpha and beta subunits of the Mo storage protein (MosA and MosB) which are related to uridine monophosphate kinase (UMPK) enzymes that catalyze the phosphorylation of UMP by ATP, yielding UDP, and playing a key role in pyrimidine nucleotide biosynthesis. The Mo storage protein from the nitrogen-fixing bacterium, Azotobacter vinelandii, is characterized as an alpha4-beta4 octamer containing a polynuclear molybdenum-oxide cluster which is ATP-dependent to bind Mo and pH-dependent to release Mo. These and related bacterial sequences in this CD are members of the Amino Acid Kinase Superfamily (AAK).
Probab=99.95 E-value=4.9e-27 Score=242.48 Aligned_cols=228 Identities=20% Similarity=0.248 Sum_probs=166.7
Q ss_pred CeEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChhHhhHHHHhhhhccCCCcccccCccccchHHH
Q 005041 17 KRVVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKA 96 (717)
Q Consensus 17 ~~iVvKiGGs~l~~~~~~~~~~~l~~l~~~Ia~l~~~G~~vviVhGGg~~~~~~~l~~~~~~~~~~~~l~~~~~~l~~~~ 96 (717)
..+|||||||++++++ .+.+.+++++|+.+++ +++++||||||. ++|......... + + ....+.+++
T Consensus 31 ~~~ViKiGGSvitdk~----~~~i~~la~~i~~~~~-~~~vilV~GGG~-~~r~~~~~~~~~--g---~--~~~~~~~~~ 97 (262)
T cd04255 31 DLNVVKIGGQSIIDRG----AEAVLPLVEEIVALRP-EHKLLILTGGGT-RARHVYSIGLDL--G---M--PTGVLAKLG 97 (262)
T ss_pred CcEEEEeccceecCCc----HHHHHHHHHHHHHHhC-CCcEEEEECCHH-HHHHHHHHHHHc--C---C--CchHHHHHH
Confidence 4689999999999985 4679999999999977 789999999977 446433211110 1 1 111233557
Q ss_pred HHHhchHHHHHHHHHHhhcCCCCcceeEecccccCchhHhhHHHHHHHHHHhCCCeEEecCCCeeeccCCCCCCCCC--e
Q 005041 97 CAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSG--I 174 (717)
Q Consensus 97 ~~a~G~~~~~~~~~~~l~~~g~~~~~~~~~~~d~~~~~~~~~~~~~i~~lL~~g~vPVv~g~d~v~~~~~~~~~~~~--~ 174 (717)
+++.++..++ ...+|..+|++. ++..+ ...++++|+.|+|||++|++.+....+. +.++ .
T Consensus 98 ~aa~~ln~lv--~~~~l~~~g~~~----i~~~~----------~~~l~~lL~~g~vPVi~g~~~~~~~~i~--~~~g~~~ 159 (262)
T cd04255 98 ASVSEQNAEM--LATLLAKHGGSK----VGHGD----------LLQLPTFLKAGRAPVISGMPPYGLWEHP--AEEGRIP 159 (262)
T ss_pred HHHHHHHHHH--HHHHHHHcCCCc----ccccc----------HHHHHHHHHCCCeEEEeCCcCCCeeeec--CCCccCC
Confidence 7777776543 256666777644 12122 2469999999999999998654332211 1233 2
Q ss_pred eecchHHHHHHHhhcCCCEEEEecccCccccCCCc-cccccccccccccchhHHHhcCCCCCcccCChHHHHHHHHHHHH
Q 005041 175 FWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAAC 253 (717)
Q Consensus 175 ~~~sD~~A~~lA~~L~Ad~li~lTDV~GV~~~dP~-~p~a~~i~~it~~e~~~~~~~gs~~~~~tggM~~Kv~aa~~a~~ 253 (717)
++|+|++|+++|.+|+||+|+++|||||||++||+ +|++++|++|+++++.+....+ ...+++|..|++++..
T Consensus 160 ~~~~D~~Aa~lA~~l~ad~li~~TdVdGVy~~dP~~~~~a~~i~~i~~~~~~~~~~~~---~~~~~~~~~~l~aa~~--- 233 (262)
T cd04255 160 PHRTDVGAFLLAEVIGARNLIFVKDEDGLYTADPKKNKKAEFIPEISAAELLKKDLDD---LVLERPVLDLLQNARH--- 233 (262)
T ss_pred CCCcHHHHHHHHHHhCCCEEEEEeccCeeECCCCCCCCCCeEccEeCHHHHHHHhcCC---CCCcHHHHHHHHHhCC---
Confidence 59999999999999999999999999999999994 8999999999988776543111 1247888888776532
Q ss_pred cCCcEEEEeCCCcchHHHHhcCCcceEEE
Q 005041 254 AGIPVVITSGFAMDSIIKVLEGKRVGTLF 282 (717)
Q Consensus 254 ~gi~v~I~~g~~~~~l~~~~tg~~iGT~i 282 (717)
.++++|+||+.|+.+.+.+.|+..||++
T Consensus 234 -~~~v~I~~g~~~~~L~~~l~g~~~GT~i 261 (262)
T cd04255 234 -VKEVQIVNGLVPGNLTRALRGEHVGTII 261 (262)
T ss_pred -CCcEEEEeCCCCCHHHHHHcCCCCceEe
Confidence 3589999999999999999998899976
No 176
>cd04260 AAK_AKi-DapG-BS AAK_AKi-DapG-BS: Amino Acid Kinase Superfamily (AAK), AKi-DapG; this CD includes the N-terminal catalytic aspartokinase (AK) domain of the diaminopimelate-sensitive aspartokinase isoenzyme AKI (DapG), a monofunctional class enzyme found in Bacilli (Bacillus subtilis 168), Clostridia, and Actinobacteria bacterial species. In Bacillus subtilis, the regulation of the diaminopimelate-lysine biosynthetic pathway involves dual control by diaminopimelate and lysine, effected through separate diaminopimelate- and lysine-sensitive aspartokinase isoenzymes. AKI activity is invariant during the exponential and stationary phases of growth and is not altered by addition of amino acids to the growth medium. The role of this isoenzyme is most likely to provide a constant level of aspartyl-beta-phosphate for the biosynthesis of diaminopimelate for peptidoglycan synthesis and dipicolinate during sporulation. The B. subtilis AKI is tetrameric consisting of two alpha and two bet
Probab=99.95 E-value=4.4e-27 Score=242.24 Aligned_cols=221 Identities=17% Similarity=0.224 Sum_probs=167.0
Q ss_pred eEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEec-----ChhHhhHHHHhhhhccCCCcccccCccccc
Q 005041 18 RVVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSS-----GAVGVGRQRLRYRKLVNSSLADLQKPQNEL 92 (717)
Q Consensus 18 ~iVvKiGGs~l~~~~~~~~~~~l~~l~~~Ia~l~~~G~~vviVhG-----Gg~~~~~~~l~~~~~~~~~~~~l~~~~~~l 92 (717)
.+|+|||||+++|+. .+++++++|+.+++.|+++||||+ |++.+++.+.+..... . .+... -
T Consensus 1 ~~ViK~GGs~l~~~~------~~~~~~~~I~~~~~~g~~~vvV~sa~g~~G~~~~~~~l~~~~~~~--~---~~~t~--~ 67 (244)
T cd04260 1 IIVQKFGGTSVSTKE------RREQVAKKVKQAVDEGYKPVVVVSAMGRKGDPYATDTLINLVYAE--N---SDISP--R 67 (244)
T ss_pred CEEEEECchhcCCHH------HHHHHHHHHHHHHHCCCCeEEEEECCCCCCCchHHHHHHHHHHhh--c---CCCCH--H
Confidence 379999999999864 478999999999999999888884 4445555444322111 1 11111 1
Q ss_pred hHHHHHHhchHHHHHHHHHHhhcCCCCccee------EecccccCchhHhhHHHHHHHHHHhCCCeEEecCCCeeeccCC
Q 005041 93 DGKACAAVGQSSLMALYDTLFSQLDVTSSQL------LVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKA 166 (717)
Q Consensus 93 ~~~~~~a~G~~~~~~~~~~~l~~~g~~~~~~------~~~~~d~~~~~~~~~~~~~i~~lL~~g~vPVv~g~d~v~~~~~ 166 (717)
..+.+.++|+..++.++...|+.+|+++.++ +++.+++.+......+.+.++++|+.|.|||++|+-+ .
T Consensus 68 ~~~~~~~~Ge~~~~~~~~~~l~~~Gi~a~~l~~~~~~lit~~~~~~~~v~~~~~~~l~~ll~~g~VPVv~g~~~--~--- 142 (244)
T cd04260 68 ELDLLMSCGEIISAVVLTSTLRAQGLKAVALTGAQAGILTDDNYSNAKIIKVNPKKILSALKEGDVVVVAGFQG--V--- 142 (244)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHhCCCCeEEechHHcCEEecCCCCceeeeccCHHHHHHHHhCCCEEEecCCcc--c---
Confidence 2346678999988888999999999998876 4455555432222234678999999999999987211 1
Q ss_pred CCCCCCCee----ecchHHHHHHHhhcCCCEEEEecccCccccCCCc-cccccccccccccchhHHHhcCCCCCcccCCh
Q 005041 167 PYEDSSGIF----WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGM 241 (717)
Q Consensus 167 ~~~~~~~~~----~~sD~~A~~lA~~L~Ad~li~lTDV~GV~~~dP~-~p~a~~i~~it~~e~~~~~~~gs~~~~~tggM 241 (717)
...+... +++|++|+.+|.+|+|++|+|+|||||||++||+ +|++++|++|+++|++++...|++
T Consensus 143 --~~~g~~~~l~rg~sD~~A~~lA~~l~A~~l~~~tDV~GVy~~dP~~~~~a~~i~~i~~~e~~~l~~~g~~-------- 212 (244)
T cd04260 143 --TEDGEVTTLGRGGSDTTAAALGAALNAEYVEIYTDVDGIMTADPRVVPNARILDVVSYNEVFQMAHQGAK-------- 212 (244)
T ss_pred --CCCCCEEEeCCCchHHHHHHHHHHcCCCEEEEEECCCcCCcCCCCCCCCCeEcccCCHHHHHHHHHcCch--------
Confidence 1123322 3799999999999999999999999999999995 789999999999999987765532
Q ss_pred HHHHHHHHHHHHcCCcEEEEeCCCc
Q 005041 242 TAKVNAAYCAACAGIPVVITSGFAM 266 (717)
Q Consensus 242 ~~Kv~aa~~a~~~gi~v~I~~g~~~ 266 (717)
+.|.+++..+.+.++|++|.|+++|
T Consensus 213 v~~~~a~~~~~~~~i~v~I~~~~~~ 237 (244)
T cd04260 213 VIHPRAVEIAMQANIPIRIRSTMSE 237 (244)
T ss_pred hcCHHHHHHHHHcCCeEEEecCCCC
Confidence 4678899999999999999999876
No 177
>PF00696 AA_kinase: Amino acid kinase family Match to Glutamate-5-kinases, C-terminal end of the alignment Match to Aspartate kinases; InterPro: IPR001048 This entry contains proteins with various specificities and includes the aspartate, glutamate and uridylate kinase families. In prokaryotes and plants the synthesis of the essential amino acids lysine and threonine is predominantly regulated by feed-back inhibition of aspartate kinase (AK) and dihydrodipicolinate synthase (DHPS). In Escherichia coli, thrA, metLM, and lysC encode aspartokinase isozymes that show feedback inhibition by threonine, methionine, and lysine, respectively []. The lysine-sensitive isoenzyme of aspartate kinase from spinach leaves has a subunit composition of 4 large and 4 small subunits []. In plants although the control of carbon fixation and nitrogen assimilation has been studied in detail, relatively little is known about the regulation of carbon and nitrogen flow into amino acids. The metabolic regulation of expression of an Arabidopsis thaliana aspartate kinase/homoserine dehydrogenase (AK/HSD) gene, which encodes two linked key enzymes in the biosynthetic pathway of aspartate family amino acids has been studied []. The conversion of aspartate into either the storage amino acid asparagine or aspartate family amino acids may be subject to a coordinated, reciprocal metabolic control, and this biochemical branch point is a part of a larger, coordinated regulatory mechanism of nitrogen and carbon storage and utilization.; GO: 0008652 cellular amino acid biosynthetic process; PDB: 2X2W_B 2WXB_B 1B7B_C 2J4L_F 2J4K_E 2J4J_F 2OGX_B 3QUO_A 3D40_A 3D41_A ....
Probab=99.95 E-value=3.7e-27 Score=243.36 Aligned_cols=229 Identities=25% Similarity=0.342 Sum_probs=159.0
Q ss_pred CeEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChhHhhHHHHhhhhccCCCccc-ccCcccc----
Q 005041 17 KRVVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLAD-LQKPQNE---- 91 (717)
Q Consensus 17 ~~iVvKiGGs~l~~~~~~~~~~~l~~l~~~Ia~l~~~G~~vviVhGGg~~~~~~~l~~~~~~~~~~~~-l~~~~~~---- 91 (717)
|++||||||+++++++ .+ +.+++++|+.+.+.|.++|||||||++.+..+. .+ +..+.+.+ .+..+..
T Consensus 1 k~~ViK~GGs~l~~~~----~~-~~~~~~~i~~l~~~g~~vvvV~g~g~~~~~~~~-~~-~~~~~~~~~~r~~~~~~~~~ 73 (242)
T PF00696_consen 1 KTIVIKLGGSSLTDKD----EE-LRELADDIALLSQLGIKVVVVHGGGSFTDELLE-KY-GIEPKFVDGSRVTDIETGLI 73 (242)
T ss_dssp SEEEEEE-HHGHSSHS----HH-HHHHHHHHHHHHHTTSEEEEEESSHHHHHHHHH-HC-THTTSEETHHCHBHHHHHHH
T ss_pred CeEEEEECchhhCCch----HH-HHHHHHHHHHHHhCCCeEEEEECChhhcCchHH-hc-cCCcccchhhhhhhhhhhHH
Confidence 5799999999999863 23 899999999999999999999999886666543 33 22223221 1111100
Q ss_pred chHHHHHHhchHHHHHHHHHHhhcCCCCcceeEecccccCchhH--hhHHHHHHHHHHhCCCeEEecCCCeeeccCCCCC
Q 005041 92 LDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDF--RKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYE 169 (717)
Q Consensus 92 l~~~~~~a~G~~~~~~~~~~~l~~~g~~~~~~~~~~~d~~~~~~--~~~~~~~i~~lL~~g~vPVv~g~d~v~~~~~~~~ 169 (717)
.....+..+++..+...+...+...+..+.+....+.++..... ...+.+.++++|++|.|||++|+-....
T Consensus 74 ~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~ipVv~g~~~~~~------ 147 (242)
T PF00696_consen 74 ITMAAAAELNRDALLDEIVSAGERLGAHAVGLSLSDGGISAAKRDAREVDKEAIRELLEQGIIPVVSGFAGIDD------ 147 (242)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCTHHEEEHHHTGGTEEEEEEESSEEHHHHHHHHHHTTSEEEEESEEEEET------
T ss_pred HHHHHhhccccchhHHHHHHhhhhhhHHHHhhhhhcccchhhhhhhhhhHHHHHHHHHHCCCEEEEeCCcccCC------
Confidence 01112223333222233445565666544333222222211111 1234689999999999999998222222
Q ss_pred CCCCe---e-ecchHHHHHHHhhcCCCEEEEecccCccccCCCc-cccccccccccccchhHHHhcCCCCCcccCChHHH
Q 005041 170 DSSGI---F-WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAK 244 (717)
Q Consensus 170 ~~~~~---~-~~sD~~A~~lA~~L~Ad~li~lTDV~GV~~~dP~-~p~a~~i~~it~~e~~~~~~~gs~~~~~tggM~~K 244 (717)
.+.. + +++|++|+.+|.+|+|++|+|+|||||||+.||+ +|++++|++|+++|+.++... +.+++|||.+|
T Consensus 148 -~g~~~~~~~~~sD~~A~~lA~~l~A~~li~~tdV~Gv~~~dP~~~~~~~~i~~l~~~e~~~l~~~---~~~~~~gm~~k 223 (242)
T PF00696_consen 148 -DGEVTTLGNVSSDYIAALLAAALGADKLIFLTDVDGVYTADPRIVPDARLIPELSYDEAEELASK---SGDVTGGMKPK 223 (242)
T ss_dssp -TSTEEEEEEETHHHHHHHHHHHTTCSEEEEEESSSSEBSSSTTTSTTSEBESEEEHHHHHHHHHH---TTSSTTTHHHH
T ss_pred -CCCcccCCCCCHHHHHHHHHHHhCchhhhhhhhcCceeecCCCCCCCCeeeeEeeHHHHHHHHhc---CCCCCCCHHHH
Confidence 4444 3 9999999999999999999999999999999995 799999999999999987632 24889999999
Q ss_pred HHHHHHHHHc-CCcEEEEe
Q 005041 245 VNAAYCAACA-GIPVVITS 262 (717)
Q Consensus 245 v~aa~~a~~~-gi~v~I~~ 262 (717)
+++|..+++. +++|+|+|
T Consensus 224 ~~~a~~~~~~~~~~v~I~n 242 (242)
T PF00696_consen 224 HPAALEAAEEGGIPVHIIN 242 (242)
T ss_dssp HHHHHHHHHHTTSEEEEEE
T ss_pred HHHHHHHHHcCCCcEEEeC
Confidence 9999999887 56799987
No 178
>TIGR02075 pyrH_bact uridylate kinase. This protein, also called UMP kinase, converts UMP to UDP by adding a phosphate from ATP. It is the first step in pyrimidine biosynthesis. GTP is an allosteric activator. In a large fraction of all bacterial genomes, the gene tends to be located immediately downstream of elongation factor Ts and upstream of ribosome recycling factor. A related protein family, believed to be equivalent in function and found in the archaea and in spirochetes, is described by a separate model, TIGR02076.
Probab=99.94 E-value=9.2e-26 Score=230.81 Aligned_cols=228 Identities=21% Similarity=0.282 Sum_probs=166.2
Q ss_pred CCeEEEEeCCcccccCCC-cccHHHHHHHHHHHHHHHHCCCeEEEEecChhHh-hHHHHhhhhccCCCcccccCccccch
Q 005041 16 VKRVVVKVGTAVVTRSDG-RLALGRLGALLEQLKELNSQGFEIILVSSGAVGV-GRQRLRYRKLVNSSLADLQKPQNELD 93 (717)
Q Consensus 16 ~~~iVvKiGGs~l~~~~~-~~~~~~l~~l~~~Ia~l~~~G~~vviVhGGg~~~-~~~~l~~~~~~~~~~~~l~~~~~~l~ 93 (717)
++++|||||||++++... +++.+++.++++.|+.+...|+++|||||||..+ ++. .+.+. .. + ..+.
T Consensus 1 ~~~iViKlGGs~i~~~~~~~~~~~~i~~~a~~i~~~~~~~~~vviV~G~Gs~~~~~~-a~~~~-~~----~-----~~~d 69 (233)
T TIGR02075 1 YKRVLLKLSGEALAGESGFGIDPDRLNRIANEIKELVKMGIEVGIVIGGGNIFRGVS-AKELG-ID----R-----VTAD 69 (233)
T ss_pred CCEEEEEeChhhcCCCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEECCCHHHHHHH-HHhcC-CC----C-----ccHH
Confidence 367999999999998322 5788899999999999998899999999996433 432 22221 10 1 0011
Q ss_pred HHHHHHhchHHHHHHHHHHhhcCCCCcceeEecccccCchhHhhHHHHHHHHHHhCCCeEEecCCCeeeccCCCCCCCCC
Q 005041 94 GKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSG 173 (717)
Q Consensus 94 ~~~~~a~G~~~~~~~~~~~l~~~g~~~~~~~~~~~d~~~~~~~~~~~~~i~~lL~~g~vPVv~g~d~v~~~~~~~~~~~~ 173 (717)
.+.+.++.....++...|...|+++..+ +..++. ........+.++++|++|.|||++|.. +.
T Consensus 70 --~~g~~~~~l~~~l~~~~L~~~Gi~a~~l--~~~~~~-~~~~~~~~~~i~~ll~~g~VpV~~g~~------------g~ 132 (233)
T TIGR02075 70 --YMGMLATVINGLALRDALEKLGVKTRVL--SAISMP-QICESYIRRKAIKHLEKGKVVIFSGGT------------GN 132 (233)
T ss_pred --HHHHHHHHHHHHHHHHHHHhCCCCcEEe--ccccCC-CCccccCHHHHHHHHHCCCEEEEECCC------------CC
Confidence 1222222222234468888899876432 222221 000111247888999999999997521 22
Q ss_pred eeecchHHHHHHHhhcCCCEEEEecc-cCccccCCCc-cccccccccccccchhHHHhcCCCCCcccCChHHHHHHHHHH
Q 005041 174 IFWDNDSLAGLLALELKADLLVLLSD-VEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCA 251 (717)
Q Consensus 174 ~~~~sD~~A~~lA~~L~Ad~li~lTD-V~GV~~~dP~-~p~a~~i~~it~~e~~~~~~~gs~~~~~tggM~~Kv~aa~~a 251 (717)
.++++|++|+.+|.+|+||.|+++|| |||||++||+ +|++++|++|+++|+.+. + . ...+++++..+
T Consensus 133 ~~~s~D~~a~~lA~~l~a~~li~~td~VdGvy~~dp~~~~~a~~i~~i~~~e~~~~---~------~--~~~d~~~~~~a 201 (233)
T TIGR02075 133 PFFTTDTAAALRAIEINADVILKGTNGVDGVYTADPKKNKDAKKYETITYNEALKK---N------L--KVMDLTAFALA 201 (233)
T ss_pred CCCCchHHHHHHHHHcCCCEEEEeecccCeEEcCCCCCCCCCeECcEecHHHHHhc---C------H--HHHHHHHHHHH
Confidence 35889999999999999999999999 9999999994 899999999998886531 1 1 13478888889
Q ss_pred HHcCCcEEEEeCCCcchHHHHhcCCcceEEE
Q 005041 252 ACAGIPVVITSGFAMDSIIKVLEGKRVGTLF 282 (717)
Q Consensus 252 ~~~gi~v~I~~g~~~~~l~~~~tg~~iGT~i 282 (717)
.++|++++|+||.+|+++.+.+.|+..||++
T Consensus 202 ~~~~i~v~i~~g~~~~~l~~~l~g~~~GT~i 232 (233)
T TIGR02075 202 RDNNLPIVVFNIDEPGALKKVILGKGIGTLV 232 (233)
T ss_pred HHCCCeEEEEeCCCcchHHHHHCCCCCCEEe
Confidence 9999999999999999999999999899986
No 179
>cd04254 AAK_UMPK-PyrH-Ec UMP kinase (UMPK)-Ec, the microbial/chloroplast uridine monophosphate kinase (uridylate kinase) enzyme that catalyzes UMP phosphorylation and plays a key role in pyrimidine nucleotide biosynthesis; regulation of this process is via feed-back control and via gene repression of carbamoyl phosphate synthetase (the first enzyme of the pyrimidine biosynthesis pathway). The UMP kinase of E. coli (Ec) is known to function as a homohexamer, with GTP and UTP being allosteric effectors. Like other related enzymes (carbamate kinase, aspartokinase, and N-acetylglutamate kinase) the E. coli and most bacterial and chloroplast UMPKs (this CD) have a conserved, N-terminal, lysine residue proposed to function in the catalysis of the phosphoryl group transfer, whereas most archaeal UMPKs appear to lack this residue and the Pyrococcus furiosus structure has an additional Mg ion bound to the ATP molecule which is proposed to function as the catalysis instead. Members of this CD be
Probab=99.94 E-value=5.3e-26 Score=232.43 Aligned_cols=228 Identities=18% Similarity=0.254 Sum_probs=166.8
Q ss_pred CeEEEEeCCcccccCCC-cccHHHHHHHHHHHHHHHHCCCeEEEEecChhHhhHHHHhhhhccCCCcccccCccccchHH
Q 005041 17 KRVVVKVGTAVVTRSDG-RLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGK 95 (717)
Q Consensus 17 ~~iVvKiGGs~l~~~~~-~~~~~~l~~l~~~Ia~l~~~G~~vviVhGGg~~~~~~~l~~~~~~~~~~~~l~~~~~~l~~~ 95 (717)
+++|||||||++++++. +++.+.+.++++.|+.++..|+++|||||||..+.......+.. .+... .
T Consensus 1 ~~iViKlGGs~itdk~~~~~~~~~i~~~a~~i~~~~~~~~~~viVhGgG~~~~~~~~~~~~~-------~~~~~-----d 68 (231)
T cd04254 1 KRVLLKLSGEALAGENGFGIDPEVLNRIAREIKEVVDLGVEVAIVVGGGNIFRGASAAEAGM-------DRATA-----D 68 (231)
T ss_pred CeEEEEeCceEECCCCCCCCCHHHHHHHHHHHHHHHHCCCcEEEEECCCcccccchhhhcCC-------Cchhh-----h
Confidence 46899999999999863 56788899999999999988999999999976441111111111 01000 1
Q ss_pred HHHHhchHHHHHHHHHHhhcCCCCcceeEecccccCchhHhhHHHHHHHHHHhCCCeEEecCCCeeeccCCCCCCCCCee
Q 005041 96 ACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIF 175 (717)
Q Consensus 96 ~~~a~G~~~~~~~~~~~l~~~g~~~~~~~~~~~d~~~~~~~~~~~~~i~~lL~~g~vPVv~g~d~v~~~~~~~~~~~~~~ 175 (717)
.+..++......++...|...|+++..+....-++.. ...+.+.+.++|++|.|||++|+. |...
T Consensus 69 ~~g~~~~~~n~~ll~~~L~~~Gv~a~~l~~~~~~~~~---~~~~~~~l~~~l~~g~ipV~~g~~------------G~~~ 133 (231)
T cd04254 69 YMGMLATVINALALQDALESLGVKTRVMSAIPMQGVA---EPYIRRRAIRHLEKGRVVIFAGGT------------GNPF 133 (231)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCeEEEcHHHhhhhh---cccCHHHHHHHHHCCCEEEEECCc------------CCCC
Confidence 1222333333335667888899876533111111110 112357899999999999998521 2224
Q ss_pred ecchHHHHHHHhhcCCCEEEEecccCccccCCCc-cccccccccccccchhHHHhcCCCCCcccCChHHHHHHHHHHHHc
Q 005041 176 WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACA 254 (717)
Q Consensus 176 ~~sD~~A~~lA~~L~Ad~li~lTDV~GV~~~dP~-~p~a~~i~~it~~e~~~~~~~gs~~~~~tggM~~Kv~aa~~a~~~ 254 (717)
+++|++|+.+|.+|+||+|+++|||||||++||+ +|+++++++|+++|+.+ .++ . ..+++++..+.+.
T Consensus 134 ~~~D~~a~~lA~~l~a~~l~~~tdVdGvy~~dp~~~~~a~~i~~i~~~~~~~---~~~------~--~~d~~a~~~a~~~ 202 (231)
T cd04254 134 FTTDTAAALRAIEINADVILKATKVDGVYDADPKKNPNAKRYDHLTYDEVLS---KGL------K--VMDATAFTLCRDN 202 (231)
T ss_pred CCcHHHHHHHHHHcCCCEEEEEeCCCEEEecCCCCCCCcEEeeEecHHHHHh---cch------h--hhHHHHHHHHHHC
Confidence 7899999999999999999999999999999995 89999999999888754 221 2 3478889889889
Q ss_pred CCcEEEEeCCCcchHHHHhcCCcceEEE
Q 005041 255 GIPVVITSGFAMDSIIKVLEGKRVGTLF 282 (717)
Q Consensus 255 gi~v~I~~g~~~~~l~~~~tg~~iGT~i 282 (717)
|++++|+||++|+++.+.+.|+..||++
T Consensus 203 gi~~~I~~g~~~~~l~~~l~g~~~GT~i 230 (231)
T cd04254 203 NLPIVVFNINEPGNLLKAVKGEGVGTLI 230 (231)
T ss_pred CCeEEEEeCCCccHHHHHHCCCCCCEEe
Confidence 9999999999999999999998899986
No 180
>PRK04531 acetylglutamate kinase; Provisional
Probab=99.94 E-value=6.8e-26 Score=246.36 Aligned_cols=212 Identities=23% Similarity=0.217 Sum_probs=160.7
Q ss_pred cCCeEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChhHhhHHHHhhhhccCCCccc-ccCccccch
Q 005041 15 NVKRVVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLAD-LQKPQNELD 93 (717)
Q Consensus 15 ~~~~iVvKiGGs~l~~~~~~~~~~~l~~l~~~Ia~l~~~G~~vviVhGGg~~~~~~~l~~~~~~~~~~~~-l~~~~~~l~ 93 (717)
.++++|||+||+++.+. +..++++|+.|++.|.++|||||||++++..+. ..++++.|.+ ++.+..+
T Consensus 35 ~~~~~VIKiGG~~l~~~--------~~~l~~dla~L~~~G~~~VlVHGggpqI~~~l~--~~gie~~~v~G~RVTd~~-- 102 (398)
T PRK04531 35 AERFAVIKVGGAVLRDD--------LEALASSLSFLQEVGLTPIVVHGAGPQLDAELD--AAGIEKETVNGLRVTSPE-- 102 (398)
T ss_pred CCcEEEEEEChHHhhcC--------HHHHHHHHHHHHHCCCcEEEEECCCHHHHHHHH--HcCCCcEEECCEecCCHH--
Confidence 35889999999999853 689999999999999999999999999999764 3456656554 3333211
Q ss_pred HHHHHHhchHHHHHHHHHHhhcCCCCcceeEecccccCchhHhhHHHHHHHHHHhCCCeEEecCCCeeeccCCCCCCCCC
Q 005041 94 GKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSG 173 (717)
Q Consensus 94 ~~~~~a~G~~~~~~~~~~~l~~~g~~~~~~~~~~~d~~~~~~~~~~~~~i~~lL~~g~vPVv~g~d~v~~~~~~~~~~~~ 173 (717)
.+..+- ..+...+ . ...+.|+.+|+.|.|||+++ ++.+..|.
T Consensus 103 --tl~vv~---------~~l~~vn---~----------------~lv~~I~~~L~~g~IPVlsp--------lg~~~~G~ 144 (398)
T PRK04531 103 --ALAIVR---------KVFQRSN---L----------------DLVEAVESSLRAGSIPVIAS--------LGETPSGQ 144 (398)
T ss_pred --HHHHHH---------HHHHHHH---H----------------HHHHHHHHHHHCCCEEEEeC--------cEECCCCc
Confidence 111110 1110000 0 01123999999999999975 12222455
Q ss_pred ee-ecchHHHHHHHhhcCCCEEEEecccCccccCCCccccccccccccc-cchhHHHhcCCCCCcccCChHHHHHHHHHH
Q 005041 174 IF-WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIR-AKHQAEITFGDKSRVGRGGMTAKVNAAYCA 251 (717)
Q Consensus 174 ~~-~~sD~~A~~lA~~L~Ad~li~lTDV~GV~~~dP~~p~a~~i~~it~-~e~~~~~~~gs~~~~~tggM~~Kv~aa~~a 251 (717)
.+ +|+|.+|+++|.+|+|++|||+|||+|||+.+ +++|++|+. ++.+.++.. .+++|||++||++|..+
T Consensus 145 ~~NvnaD~vA~~LA~aL~a~KLIfltdv~GV~d~~-----g~~i~~i~~~~e~~~l~~~----~~vtgGM~~KL~~a~~a 215 (398)
T PRK04531 145 ILNINADVAANELVSALQPYKIIFLTGTGGLLDAD-----GKLISSINLSTEYDHLMQQ----PWINGGMKLKLEQIKEL 215 (398)
T ss_pred EEEECHHHHHHHHHHHcCCCEEEEEECCCCccCCC-----CCCcccCCHHHHHHHHHhc----CCCCccHHHHHHHHHHH
Confidence 56 99999999999999999999999999999853 789999997 466665543 37899999999999999
Q ss_pred HHcCCcEEEEeCCCcchH-HHHhcCCcceEEEecC
Q 005041 252 ACAGIPVVITSGFAMDSI-IKVLEGKRVGTLFHRD 285 (717)
Q Consensus 252 ~~~gi~v~I~~g~~~~~l-~~~~tg~~iGT~i~a~ 285 (717)
++...+++++++..++++ .++++.+..||.+...
T Consensus 216 l~~~~~~~~V~i~~~~~Ll~eLft~~G~GT~I~~g 250 (398)
T PRK04531 216 LDRLPLESSVSITSPSDLAKELFTHKGSGTLVRRG 250 (398)
T ss_pred HhCCCcEEEEEecCCCHHHHHHccCCCCCeEEecC
Confidence 975334899999999998 7788988899999876
No 181
>PRK08841 aspartate kinase; Validated
Probab=99.94 E-value=1.1e-25 Score=245.75 Aligned_cols=222 Identities=22% Similarity=0.283 Sum_probs=172.2
Q ss_pred CeEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChhHhhHHHHhhhhccCCCcccccCccccchHHH
Q 005041 17 KRVVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKA 96 (717)
Q Consensus 17 ~~iVvKiGGs~l~~~~~~~~~~~l~~l~~~Ia~l~~~G~~vviVhGGg~~~~~~~l~~~~~~~~~~~~l~~~~~~l~~~~ 96 (717)
+++|+||||+++.+. +.+.+++++|+.+++.|+++||||||++..+..+++..... ..+.. ....+.
T Consensus 2 ~~~V~KfGGtsv~~~------~~i~~va~~I~~~~~~g~~vvvVvSa~~~~td~ll~~~~~~----~~~~~---~~~~d~ 68 (392)
T PRK08841 2 PLIVQKFGGTSVGSI------ERIQTVAEHIIKAKNDGNQVVVVVSAMAGETNRLLGLAKQV----DSVPT---ARELDV 68 (392)
T ss_pred CeEEEeECcccCCCH------HHHHHHHHHHHHHHHCCCCEEEEECCCchHHHHHHHhhhhh----ccCCC---HHHHHH
Confidence 579999999999875 45899999999999999999999999987787765533221 11100 112357
Q ss_pred HHHhchHHHHHHHHHHhhcCCCCccee------EecccccCchhHhhHHHHHHHHHHhCCCeEEecCCCeeeccCCCCCC
Q 005041 97 CAAVGQSSLMALYDTLFSQLDVTSSQL------LVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYED 170 (717)
Q Consensus 97 ~~a~G~~~~~~~~~~~l~~~g~~~~~~------~~~~~d~~~~~~~~~~~~~i~~lL~~g~vPVv~g~d~v~~~~~~~~~ 170 (717)
+.++|+...+.++...|+..|+++..+ +++++.+.+........+.+.++++.|.|||++|+-+. ..
T Consensus 69 l~s~GE~~s~~lla~~L~~~Gi~a~~l~~~~~~i~t~~~~~~~~i~~~~~~~i~~ll~~~~vpVv~Gf~g~-------~~ 141 (392)
T PRK08841 69 LLSAGEQVSMALLAMTLNKLGYAARSLTGAQANIVTDNQHNDATIKHIDTSTITELLEQDQIVIVAGFQGR-------NE 141 (392)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCeEEEehhHcCEEecCCCCCceechhhHHHHHHHHhCCCEEEEeCCccc-------CC
Confidence 789999998889999999999876433 34444443222222346889999999999999873221 11
Q ss_pred CCCe--e--ecchHHHHHHHhhcCCCEEEEecccCccccCCCc-cccccccccccccchhHHHhcCCCCCcccCChHHHH
Q 005041 171 SSGI--F--WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKV 245 (717)
Q Consensus 171 ~~~~--~--~~sD~~A~~lA~~L~Ad~li~lTDV~GV~~~dP~-~p~a~~i~~it~~e~~~~~~~gs~~~~~tggM~~Kv 245 (717)
.|.. + +++|++|+.+|.+|+||.|+++|||||||++||+ +|++++|++|+++|+.++... |.+..+.
T Consensus 142 ~g~~ttlgrggsD~tAa~lA~~L~Ad~l~i~TDVdGVyt~DP~~v~~A~~i~~is~~ea~ela~~--------Ga~vlhp 213 (392)
T PRK08841 142 NGDITTLGRGGSDTTAVALAGALNADECQIFTDVDGVYTCDPRVVKNARKLDVIDFPSMEAMARK--------GAKVLHL 213 (392)
T ss_pred CCCEEEeCCCChHHHHHHHHHHcCCCEEEEEeCCCCCCcCCCCCCCCceEcccccHHHHHHHHhc--------CccccCH
Confidence 2222 2 6999999999999999999999999999999995 999999999999999886653 5557788
Q ss_pred HHHHHHHHcCCcEEEEeCCCc
Q 005041 246 NAAYCAACAGIPVVITSGFAM 266 (717)
Q Consensus 246 ~aa~~a~~~gi~v~I~~g~~~ 266 (717)
+++..+.++|+|++|.|++++
T Consensus 214 ~ai~~a~~~~Ipi~i~n~~~~ 234 (392)
T PRK08841 214 PSVQHAWKHSVPLRVLSSFEV 234 (392)
T ss_pred HHHHHHHHCCCeEEEEecCCC
Confidence 999999999999999998865
No 182
>PRK12354 carbamate kinase; Reviewed
Probab=99.94 E-value=1.8e-25 Score=232.09 Aligned_cols=245 Identities=24% Similarity=0.315 Sum_probs=168.6
Q ss_pred eEEEEeCCcccccCCCcc--c--HHHHHHHHHHHHHHHHCCCeEEEEecChhHhhHHHHhhhhccCCCcccccCccccch
Q 005041 18 RVVVKVGTAVVTRSDGRL--A--LGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELD 93 (717)
Q Consensus 18 ~iVvKiGGs~l~~~~~~~--~--~~~l~~l~~~Ia~l~~~G~~vviVhGGg~~~~~~~l~~~~~~~~~~~~l~~~~~~l~ 93 (717)
++|||||||+|.+++.+. . ++++...++.|+.+.+ |+++||+||+|||+|..++..... .+. ..+.|.
T Consensus 2 ~iVialGGnal~~~~~~~~~~~~~~~v~~~a~~ia~~~~-~~~vvi~HGnGpqvG~~~~~~~~~-----~~~--~~~pl~ 73 (307)
T PRK12354 2 RIVVALGGNALLRRGEPLTAENQRANIRIAAEQIAKIAR-EHELVIVHGNGPQVGLLALQNAAY-----KDV--TPYPLD 73 (307)
T ss_pred eEEEEeccHHhCCCCCCcCHHHHHHHHHHHHHHHHHHhC-CCeEEEEeCCccHHhHHHHHHHHh-----cCC--CCCCcc
Confidence 589999999999976533 3 4588999999999988 999999999999999644332211 110 223333
Q ss_pred HHHHHHhchHHHH--HHHHHHhhcCCCCc--ceeEecccc--cCchh-------------------------------H-
Q 005041 94 GKACAAVGQSSLM--ALYDTLFSQLDVTS--SQLLVTDSD--FRDED-------------------------------F- 135 (717)
Q Consensus 94 ~~~~~a~G~~~~~--~~~~~~l~~~g~~~--~~~~~~~~d--~~~~~-------------------------------~- 135 (717)
.....+-|..+.+ ..+.+.|..+.+.. .|+.+..+| |.+.. +
T Consensus 74 ~~~a~sqg~iGy~l~q~l~~~l~~~~v~tivtq~~Vd~~dpAf~~ptKpiG~~y~~~~a~~~~~e~g~~~~~dg~g~rrV 153 (307)
T PRK12354 74 VLGAETEGMIGYMLEQELGNLLPERPVATLLTQVEVDANDPAFANPTKPIGPVYDEAEAERLAAEKGWTIKPDGDYFRRV 153 (307)
T ss_pred hhcccccchHHHHHHHHHHHHhcCCcceEEEEEEEEcCCCCccCCCCCCcCcccCHHHHHHHHHhcCCEEeecCCceEEE
Confidence 3233445555543 22234453322211 122222111 11100 0
Q ss_pred h-------hHHHHHHHHHHhCCCeEEecCCCeeeccCCCCCCCC---C-e-eecchHHHHHHHhhcCCCEEEEecccCcc
Q 005041 136 R-------KQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSS---G-I-FWDNDSLAGLLALELKADLLVLLSDVEGL 203 (717)
Q Consensus 136 ~-------~~~~~~i~~lL~~g~vPVv~g~d~v~~~~~~~~~~~---~-~-~~~sD~~A~~lA~~L~Ad~li~lTDV~GV 203 (717)
+ ..+.+.|+.||++|+|||.+|...++.. .++.+ + . ++|+|.+|+.||.+|+||+|+|+||||||
T Consensus 154 v~SP~P~~ive~~~I~~Ll~~g~ivIa~GGGGIPV~---~~~~~~~~gv~aViD~D~~Aa~LA~~l~Ad~LiiLTdVdGV 230 (307)
T PRK12354 154 VPSPRPKRIVEIRPIRWLLEKGHLVICAGGGGIPVV---YDADGKLHGVEAVIDKDLAAALLAEQLDADLLLILTDVDAV 230 (307)
T ss_pred ecCCCCcceeCHHHHHHHHHCCCEEEEeCCCccCeE---ecCCCceeeeeecCCccHHHHHHHHHcCCCEEEEEeCCcce
Confidence 0 1347899999999998888765555431 11112 1 1 47999999999999999999999999999
Q ss_pred ccCCCccccccccccccccchhHHHhcCCCCCcccCChHHHHHHHHHHHHcCCc-EEEEeCCCcchHHHHhcCCcceEEE
Q 005041 204 YSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIP-VVITSGFAMDSIIKVLEGKRVGTLF 282 (717)
Q Consensus 204 ~~~dP~~p~a~~i~~it~~e~~~~~~~gs~~~~~tggM~~Kv~aa~~a~~~gi~-v~I~~g~~~~~l~~~~tg~~iGT~i 282 (717)
|++++ +|++++|++++.+|+.++ . ..+|||.||+++|..+++++.. ++|.+ ++.+.+.+.|+ .||++
T Consensus 231 y~~~~-~p~~k~i~~it~~e~~~~-~------f~~GgM~pKV~AA~~~~~~gg~~viI~~---~~~l~~al~G~-~GT~I 298 (307)
T PRK12354 231 YLDWG-KPTQRAIAQATPDELREL-G------FAAGSMGPKVEAACEFVRATGKIAGIGS---LEDIQAILAGE-AGTRI 298 (307)
T ss_pred ecCCC-CCCCeECCCCCHHHHHhh-C------CCcCChHHHHHHHHHHHHhCCCEEEECC---HHHHHHHHCCC-CceEE
Confidence 99854 688999999999988764 2 5799999999999998887665 88854 56778888886 79998
Q ss_pred ecC
Q 005041 283 HRD 285 (717)
Q Consensus 283 ~a~ 285 (717)
..+
T Consensus 299 ~~~ 301 (307)
T PRK12354 299 SPE 301 (307)
T ss_pred ecC
Confidence 765
No 183
>PRK14557 pyrH uridylate kinase; Provisional
Probab=99.93 E-value=5.6e-25 Score=225.27 Aligned_cols=234 Identities=17% Similarity=0.224 Sum_probs=167.4
Q ss_pred hccCCeEEEEeCCcccccCCC-cccHHHHHHHHHHHHHHHHCCCeEEEEecChhHh-hHHHHhhhhccCCCcccccCccc
Q 005041 13 LKNVKRVVVKVGTAVVTRSDG-RLALGRLGALLEQLKELNSQGFEIILVSSGAVGV-GRQRLRYRKLVNSSLADLQKPQN 90 (717)
Q Consensus 13 ~~~~~~iVvKiGGs~l~~~~~-~~~~~~l~~l~~~Ia~l~~~G~~vviVhGGg~~~-~~~~l~~~~~~~~~~~~l~~~~~ 90 (717)
|..++++|+||||+++.++++ .++.+++.++++.|+.+.+.|++++||||||..+ |+. .+.. +. ...
T Consensus 1 ~~~~~riViKlGG~al~~~~~~~~~~~~i~~~a~~i~~~~~~g~~vvVVvGgGn~~rg~~-a~~~-~~-------~~~-- 69 (247)
T PRK14557 1 MRPYKRVLIKLSGGALADQTGNSFNSKRLEHIANEILSIVDLGIEVSIVIGGGNIFRGHL-AEEW-GI-------DRV-- 69 (247)
T ss_pred CCcccEEEEEeCceeECCCCCCCcCHHHHHHHHHHHHHHHHcCCeEEEEECCcHHHHHHH-HHhc-CC-------ChH--
Confidence 456789999999999988654 5677889999999999999999999999997533 442 2111 11 110
Q ss_pred cchHHHHHHhchHHHHHHHHHHhhcC-CCCcceeEecccccCchhHhhHHHHHHHHHHhCCCeEEecCCCeeeccCCCCC
Q 005041 91 ELDGKACAAVGQSSLMALYDTLFSQL-DVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYE 169 (717)
Q Consensus 91 ~l~~~~~~a~G~~~~~~~~~~~l~~~-g~~~~~~~~~~~d~~~~~~~~~~~~~i~~lL~~g~vPVv~g~d~v~~~~~~~~ 169 (717)
....+-+.|...-..++...|... +..+. ++++..+.... .......+.+.|++|.|||+.|+.
T Consensus 70 --~~D~ig~~g~~lna~ll~~~l~~~~~~~~~--i~t~~~~~~~~-~~~~~~~~~~~l~~g~VvV~~G~~---------- 134 (247)
T PRK14557 70 --EADNIGTLGTIINSLMLRGVLTSKTNKEVR--VMTSIPFNAVA-EPYIRLRAVHHLDNGYIVIFGGGN---------- 134 (247)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHhhhCCcee--EEecccccccc-chhhHHHHHHHHhCCCEEEEECCc----------
Confidence 011333444443333445556543 33322 34444333211 111224566779999999997621
Q ss_pred CCCCeeecchHHHHHHHhhcCCCEEEEe-cccCccccCCC-ccccccccccccccchhHHHhcCCCCCcccCChHHHHHH
Q 005041 170 DSSGIFWDNDSLAGLLALELKADLLVLL-SDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNA 247 (717)
Q Consensus 170 ~~~~~~~~sD~~A~~lA~~L~Ad~li~l-TDV~GV~~~dP-~~p~a~~i~~it~~e~~~~~~~gs~~~~~tggM~~Kv~a 247 (717)
+...+++|++|+.+|.+++||.|+++ |||||||++|| ++|+|++|++|+++|... .+ -.-| ..++
T Consensus 135 --g~~~~stD~lAallA~~l~Ad~li~~ttdVdGvY~~DP~~~~~Ak~i~~i~~~e~~~---~~------~~~~--~~~A 201 (247)
T PRK14557 135 --GQPFVTTDYPSVQRAIEMNSDAILVAKQGVDGVFTSDPKHNKSAKMYRKLNYNDVVR---QN------IQVM--DQAA 201 (247)
T ss_pred --CCCccChHHHHHHHHHHhCCCEEEEecCCcCEeECCCCCCCCCCEEeeEEChhhhcc---cC------HHHH--HHHH
Confidence 22347899999999999999999999 59999999999 599999999999887631 11 1123 3468
Q ss_pred HHHHHHcCCcEEEEeCCCcchHHHHhcCCcceEEEecC
Q 005041 248 AYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRD 285 (717)
Q Consensus 248 a~~a~~~gi~v~I~~g~~~~~l~~~~tg~~iGT~i~a~ 285 (717)
+..|.++|++++|+||++|+.+.+.+.|+..||++.+.
T Consensus 202 ~~~a~~~gi~v~I~ng~~~~~l~~~l~g~~~GT~i~~~ 239 (247)
T PRK14557 202 LLLARDYNLPAHVFNFDEPGVMRRICLGEHVGTLINDD 239 (247)
T ss_pred HHHHHHCCCcEEEEeCCCChHHHHHHcCCCCcEEEecC
Confidence 88899999999999999999999999999999999876
No 184
>TIGR00656 asp_kin_monofn aspartate kinase, monofunctional class. The Lys-sensitive enzyme of Bacillus subtilis resembles the E. coli form but is an alpha 2/beta 2 heterotetramer, where the beta subunit is translated from an in-phase alternative initiator at Met-246. The protein slr0657 from Synechocystis PCC6803 is extended by a duplication of the C-terminal region corresponding to the beta chain. Incorporation of a second copy of the C-terminal domain may be quite common in this subgroup of aspartokinases.
Probab=99.93 E-value=4e-25 Score=244.79 Aligned_cols=230 Identities=21% Similarity=0.291 Sum_probs=176.8
Q ss_pred eEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChhHhhHHHHhhhh-ccCCCcccccCccccchHHH
Q 005041 18 RVVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRK-LVNSSLADLQKPQNELDGKA 96 (717)
Q Consensus 18 ~iVvKiGGs~l~~~~~~~~~~~l~~l~~~Ia~l~~~G~~vviVhGGg~~~~~~~l~~~~-~~~~~~~~l~~~~~~l~~~~ 96 (717)
++|+||||+++.+. +.+.+++++|+.+++.|++++|||||++.++..+++... +.... .. ....+.
T Consensus 2 ~iViK~GGs~~~~~------~~i~~~~~~i~~~~~~g~~~vvV~sg~~~~t~~l~~~~~~~~~~~---~~----~~~~~~ 68 (401)
T TIGR00656 2 LIVQKFGGTSVGSG------ERIKNAARIVLKEKKEGHKVVVVVSAMSGVTDALVEISEKAIRDA---IT----PRERDE 68 (401)
T ss_pred cEEEEECCcCcCCH------HHHHHHHHHHHHHHHcCCCEEEEEeCCCCChHHHHHHHHHHhccC---CC----hHHHHH
Confidence 58999999999975 358999999999999999999999999999998765442 11000 00 011246
Q ss_pred HHHhchHHHHHHHHHHhhcCCCCcceeE------ecccccCchhHhhHHH-HHHHHHHhCCCeEEecCCCeeeccCCCCC
Q 005041 97 CAAVGQSSLMALYDTLFSQLDVTSSQLL------VTDSDFRDEDFRKQLY-DTVQSLLDLRVIPIFNENDAVSTRKAPYE 169 (717)
Q Consensus 97 ~~a~G~~~~~~~~~~~l~~~g~~~~~~~------~~~~d~~~~~~~~~~~-~~i~~lL~~g~vPVv~g~d~v~~~~~~~~ 169 (717)
+.+.|+..+..++...|..+|+++.++. ++...+.+......+. +.+.++++.|.|||++|+-+..
T Consensus 69 i~~~Ge~~s~~~~~~~l~~~g~~a~~l~~~~~~~~t~~~~~~~~~~~~~~~~~l~~~l~~~~vpVi~g~~~~~------- 141 (401)
T TIGR00656 69 LVSHGERLSSALFSGALRDLGVKAIWLDGGEAGIITDDNFGNAKIDIIATEERLLPLLEEGIIVVVAGFQGAT------- 141 (401)
T ss_pred HhhHHHHHHHHHHHHHHHhCCCceEEeccccceEEeCCCCCceEeeecchHHHHHHHHhCCCEEEecCcceeC-------
Confidence 6778988777788999999999887663 3344443222222234 7899999999999999722211
Q ss_pred CCCCee----ecchHHHHHHHhhcCCCEEEEecccCccccCCCc-cccccccccccccchhHHHhcCCCCCcccCChHHH
Q 005041 170 DSSGIF----WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAK 244 (717)
Q Consensus 170 ~~~~~~----~~sD~~A~~lA~~L~Ad~li~lTDV~GV~~~dP~-~p~a~~i~~it~~e~~~~~~~gs~~~~~tggM~~K 244 (717)
..|... +++|++|+.+|.+|+|++|+++|||||||++||+ +|+++++++|+++|+.++...| ..+.+
T Consensus 142 ~~g~~~~lgrg~sD~~A~~lA~~l~A~~l~i~tdV~Gv~~~DP~~~~~a~~i~~ls~~ea~~l~~~G--------~~v~~ 213 (401)
T TIGR00656 142 EKGYTTTLGRGGSDYTAALLAAALKADRVDIYTDVPGVYTTDPRVVEAAKRIDKISYEEALELATFG--------AKVLH 213 (401)
T ss_pred CCCCEeecCCCcHHHHHHHHHHHcCCCEEEEEECCCCCCcCCCCCCCCcEECCccCHHHHHHHHHcC--------CcccC
Confidence 123222 5899999999999999999999999999999995 8999999999999999877654 33667
Q ss_pred HHHHHHHHHcCCcEEEEeCCCcchHHHHhcCCcceEEEecC
Q 005041 245 VNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRD 285 (717)
Q Consensus 245 v~aa~~a~~~gi~v~I~~g~~~~~l~~~~tg~~iGT~i~a~ 285 (717)
.+++..+.++++|++|.|+++|+ .||++...
T Consensus 214 ~~a~~~a~~~~i~i~i~~~~~~~----------~gT~I~~~ 244 (401)
T TIGR00656 214 PRTVEPAMRSGVPIEVRSSFDPE----------EGTLITNS 244 (401)
T ss_pred HHHHHHHHHCCCeEEEEECCCCC----------CCeEEEeC
Confidence 88999999999999999999874 37877543
No 185
>TIGR02076 pyrH_arch uridylate kinase, putative. This family consists of the archaeal and spirochete proteins most closely related to bacterial uridylate kinases (TIGR02075), an enzyme involved in pyrimidine biosynthesis. Members are likely, but not known, to be functionally equivalent to their bacterial counterparts. However, substantial sequence differences suggest that regulatory mechanisms may be different; the bacterial form is allosterically regulated by GTP.
Probab=99.93 E-value=7.3e-25 Score=222.76 Aligned_cols=218 Identities=19% Similarity=0.263 Sum_probs=157.7
Q ss_pred EEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChhHhhHHHHhhhhccCCCcccccCccccchHHHHH
Q 005041 19 VVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACA 98 (717)
Q Consensus 19 iVvKiGGs~l~~~~~~~~~~~l~~l~~~Ia~l~~~G~~vviVhGGg~~~~~~~l~~~~~~~~~~~~l~~~~~~l~~~~~~ 98 (717)
+|||||||+++++. +.+.+.++++.|+.++.. ++++||||||.. .+.+++..+... +.. ..+...++
T Consensus 1 iViKlGGs~l~~~~---~~~~i~~i~~~i~~~~~~-~~viiV~ggG~~-a~~~~~~~~~~~-----~~~--~~~~~~g~- 67 (221)
T TIGR02076 1 IVISLGGSVLSPEI---DAEFIKEFANILRKLSDE-HKVGVVVGGGKT-ARRYIGVARELG-----ASE--TFLDEIGI- 67 (221)
T ss_pred CEEEechhhcCCCC---CHHHHHHHHHHHHHHHhC-CeEEEEECCcHH-HHHHHHHHHHcC-----CCH--HHHHHhhh-
Confidence 48999999999864 567899999999999876 899999988764 454433322210 100 00111111
Q ss_pred HhchHHHHHHHHHHhhcCCCCcceeEecccccCchhHhhHHHHHHHHHHhCCCeEEecCCCeeeccCCCCCCCCCeeecc
Q 005041 99 AVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDN 178 (717)
Q Consensus 99 a~G~~~~~~~~~~~l~~~g~~~~~~~~~~~d~~~~~~~~~~~~~i~~lL~~g~vPVv~g~d~v~~~~~~~~~~~~~~~~s 178 (717)
.+...-..+++.+|...++++... + .....++++.|.|||+.|+. + .+++
T Consensus 68 -~~~~ln~~~l~~ll~~~~~~~~~~-----~----------~~~~~~~l~~g~ipv~~G~~---~-----------~~s~ 117 (221)
T TIGR02076 68 -DATRLNAMLLIAALGDDAYPKVPE-----N----------FEEALEAMSLGKIVVMGGTH---P-----------GHTT 117 (221)
T ss_pred -HHHHHHHHHHHHHHHhcCCCCcCC-----C----------HHHHHHHHHcCCEEEEcCCC---C-----------CCCc
Confidence 112111223445554444433211 1 23456778999999998721 1 1678
Q ss_pred hHHHHHHHhhcCCCEEEEecccCccccCCC-ccccccccccccccchhHHHhcCCCCCcccC-ChHHHHHHHHHHHHcCC
Q 005041 179 DSLAGLLALELKADLLVLLSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGDKSRVGRG-GMTAKVNAAYCAACAGI 256 (717)
Q Consensus 179 D~~A~~lA~~L~Ad~li~lTDV~GV~~~dP-~~p~a~~i~~it~~e~~~~~~~gs~~~~~tg-gM~~Kv~aa~~a~~~gi 256 (717)
|++|+.+|.+|+||+|+++|||||||++|| ++|++++|++|+++|+.++...+ ..++| +|..|+.++..+.+.|+
T Consensus 118 D~~A~~lA~~l~A~~li~ltdVdGvy~~dP~~~~~a~~i~~i~~~e~~~~~~~~---~~~~g~~~~~~~~a~~~~~~~~i 194 (221)
T TIGR02076 118 DAVAALLAEFSKADLLINATNVDGVYDKDPKKDPDAKKFDKLTPEELVEIVGSS---SVKAGSNEVVDPLAAKIIERSKI 194 (221)
T ss_pred HHHHHHHHHHcCCCEEEEEeCCCcccCCCCCCCCCCeEeeEECHHHHHHHhcCC---CccCCCCceeHHHHHHHHHHCCC
Confidence 999999999999999999999999999999 58999999999999887754322 24456 67789999999999999
Q ss_pred cEEEEeCCCcchHHHHhcCCcceEEE
Q 005041 257 PVVITSGFAMDSIIKVLEGKRVGTLF 282 (717)
Q Consensus 257 ~v~I~~g~~~~~l~~~~tg~~iGT~i 282 (717)
+++|+||+.|+++.+.+.|+..||.+
T Consensus 195 ~v~I~~g~~~~~l~~~l~g~~~GT~i 220 (221)
T TIGR02076 195 RTIVVNGRDPENLEKVLKGEHVGTII 220 (221)
T ss_pred cEEEECCCCccHHHHHHCCCCCCeEe
Confidence 99999999999998888898889986
No 186
>PRK14556 pyrH uridylate kinase; Provisional
Probab=99.93 E-value=1.3e-24 Score=219.79 Aligned_cols=234 Identities=18% Similarity=0.252 Sum_probs=172.1
Q ss_pred HhhccCCeEEEEeCCcccccCCC-cccHHHHHHHHHHHHHHHHCCCeEEEEecChhHhhHHHHhhhhccCCCcccccCcc
Q 005041 11 DFLKNVKRVVVKVGTAVVTRSDG-RLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQ 89 (717)
Q Consensus 11 ~~~~~~~~iVvKiGGs~l~~~~~-~~~~~~l~~l~~~Ia~l~~~G~~vviVhGGg~~~~~~~l~~~~~~~~~~~~l~~~~ 89 (717)
.+|..++++|+|++|+++...++ .++.+.+..++++|+.+.+.|+++.||.|||.-+.....+...++ +..
T Consensus 10 ~~~~~~~rvllKlsGe~l~~~~~~~~d~~~~~~~a~~i~~~~~~g~~i~iVvGGGni~Rg~~~~~~~~~-------~r~- 81 (249)
T PRK14556 10 QKLPKLKRILLKLSGESLSADQGFGINVESAQPIINQIKTLTNFGVELALVVGGGNILRGGRANFGNKI-------RRA- 81 (249)
T ss_pred hhhhhhCEEEEEEehhhCcCCCCCCcCHHHHHHHHHHHHHHHhCCcEEEEEECCCHHHhCchhhccCCC-------chh-
Confidence 34666789999999999997654 588889999999999999999999999999884333111100111 110
Q ss_pred ccchHHHHHHhchHHHHHHHHHHhhcCCCCcceeEec--ccccCchhHhhHHHHHHHHHHhCCCeEEecCCCeeeccCCC
Q 005041 90 NELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVT--DSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAP 167 (717)
Q Consensus 90 ~~l~~~~~~a~G~~~~~~~~~~~l~~~g~~~~~~~~~--~~d~~~~~~~~~~~~~i~~lL~~g~vPVv~g~d~v~~~~~~ 167 (717)
..+..+|.+.-...+ ++...|...|+++. +... ...+ .+.+ +.+.+.+.|++|.|+|+.|+
T Consensus 82 -~~D~~GmlaT~iNal--~l~~~l~~~~~~~~-v~sa~~~~~~--~e~~--~~~~~~~~l~~g~vvi~~gg--------- 144 (249)
T PRK14556 82 -TADSMGMIATMINAL--ALRDMLISEGVDAE-VFSAKGVDGL--LKVA--SAHEFNQELAKGRVLIFAGG--------- 144 (249)
T ss_pred -hhhHHHHHHHHHHHH--HHHHHHHHcCCCeE-EeeccccCcC--CCCC--CHHHHHHHHhCCCEEEEECC---------
Confidence 112234444332222 45578888887654 2211 1222 2233 24677888999999998751
Q ss_pred CCCCCCeeecchHHHHHHHhhcCCCEEEEecccCccccCCC-ccccccccccccccchhHHHhcCCCCCcccCChHHHHH
Q 005041 168 YEDSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVN 246 (717)
Q Consensus 168 ~~~~~~~~~~sD~~A~~lA~~L~Ad~li~lTDV~GV~~~dP-~~p~a~~i~~it~~e~~~~~~~gs~~~~~tggM~~Kv~ 246 (717)
.|..++++|++|+.+|.+++||.|+++|||||||++|| ++|+++++++|+++|..+. + .. ..+..
T Consensus 145 ---~G~p~~StD~lAallA~~l~Ad~Lii~TdVDGVYd~DP~~~p~A~~i~~I~~~e~~~~---~------l~--vmd~~ 210 (249)
T PRK14556 145 ---TGNPFVTTDTTASLRAVEIGADALLKATTVNGVYDKDPNKYSDAKRFDKVTFSEVVSK---E------LN--VMDLG 210 (249)
T ss_pred ---CCCCcCCcHHHHHHHHHHcCCCEEEEEeCCCccCCCCCCCCCCceEeeEEchhhhccc---c------hH--hHHHH
Confidence 23446889999999999999999999999999999999 5999999999998887531 1 11 33567
Q ss_pred HHHHHHHcCCcEEEEeCCCcchHHHHhcCCcceEEEe
Q 005041 247 AAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFH 283 (717)
Q Consensus 247 aa~~a~~~gi~v~I~~g~~~~~l~~~~tg~~iGT~i~ 283 (717)
++..+.++|+|++|+|+++|+.+.+.+.|+..||++.
T Consensus 211 A~~~a~~~gIpi~I~ng~~~~~L~~~l~Ge~~GT~i~ 247 (249)
T PRK14556 211 AFTQCRDFGIPIYVFDLTQPNALVDAVLDSKYGTWVT 247 (249)
T ss_pred HHHHHHHCCCcEEEECCCCchHHHHHHcCCCCceEEE
Confidence 8888999999999999999999999999999999875
No 187
>PRK08210 aspartate kinase I; Reviewed
Probab=99.93 E-value=5.5e-25 Score=243.43 Aligned_cols=231 Identities=19% Similarity=0.279 Sum_probs=173.3
Q ss_pred CeEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChhHh-----hHHHHhhhhccCCCcccccCcccc
Q 005041 17 KRVVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGV-----GRQRLRYRKLVNSSLADLQKPQNE 91 (717)
Q Consensus 17 ~~iVvKiGGs~l~~~~~~~~~~~l~~l~~~Ia~l~~~G~~vviVhGGg~~~-----~~~~l~~~~~~~~~~~~l~~~~~~ 91 (717)
+++|||||||++++++ ...+++++|+.+.++|+++||||+|+++. ++.+++..... . ......
T Consensus 2 ~~iViK~GGs~l~~~~------~~~~~~~~i~~~~~~g~~~vvV~sa~g~~G~~~~t~~l~~~~~~~--~-~~~~~~--- 69 (403)
T PRK08210 2 KIIVQKFGGTSVSTEE------RRKMAVNKIKKALKEGYKVVVVVSAMGRKGDPYATDTLLSLVGEE--F-SEISKR--- 69 (403)
T ss_pred CeEEEeECCcccCCHH------HHHHHHHHHHHHHHcCCCEEEEEeCCCCCCCCCccHHHHHHHHHh--c-cCCChH---
Confidence 6899999999999864 37899999999999999999999665554 44443322111 0 011111
Q ss_pred chHHHHHHhchHHHHHHHHHHhhcCCCCccee------EecccccCchhHhhHHHHHHHHHHhCCCeEEecCCCeeeccC
Q 005041 92 LDGKACAAVGQSSLMALYDTLFSQLDVTSSQL------LVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRK 165 (717)
Q Consensus 92 l~~~~~~a~G~~~~~~~~~~~l~~~g~~~~~~------~~~~~d~~~~~~~~~~~~~i~~lL~~g~vPVv~g~d~v~~~~ 165 (717)
..+.+.++|+.....++...|..+|+++.++ +++.+++.+......+.+.+..+++.|.|||++|+-+.
T Consensus 70 -~~~~l~~~Ge~~s~~~~~~~l~~~Gi~a~~l~~~~~~~~t~~~~~~~~v~~~~~~~l~~~l~~~~vpVi~G~~~~---- 144 (403)
T PRK08210 70 -EQDLLMSCGEIISSVVFSNMLNENGIKAVALTGGQAGIITDDNFTNAKIIEVNPDRILEALEEGDVVVVAGFQGV---- 144 (403)
T ss_pred -HHHHHHhHhHHHHHHHHHHHHHhCCCCeEEechHHccEEccCCCCceeeehhhHHHHHHHHhcCCEEEeeCeeec----
Confidence 1235688999888778889999999988765 44555454322222346899999999999999982211
Q ss_pred CCCCCCCCe--e--ecchHHHHHHHhhcCCCEEEEecccCccccCCCc-cccccccccccccchhHHHhcCCCCCcccCC
Q 005041 166 APYEDSSGI--F--WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGG 240 (717)
Q Consensus 166 ~~~~~~~~~--~--~~sD~~A~~lA~~L~Ad~li~lTDV~GV~~~dP~-~p~a~~i~~it~~e~~~~~~~gs~~~~~tgg 240 (717)
...|.. + +++|++|+.+|.+|+|++|+|+|||||||+.||+ +|++++|++|+++|+.++...|++
T Consensus 145 ---~~~g~~~~l~rg~sD~~A~~lA~~l~A~~l~i~tDV~GV~~~dP~~~~~a~~i~~ls~~ea~~l~~~G~~------- 214 (403)
T PRK08210 145 ---TENGDITTLGRGGSDTTAAALGVALKAEYVDIYTDVDGIMTADPRIVEDARLLDVVSYNEVFQMAYQGAK------- 214 (403)
T ss_pred ---CCCCCEEEeCCCchHHHHHHHHHHcCCCEEEEEECCCCCCcCCCCcCCCCeECCccCHHHHHHHHHCCcc-------
Confidence 113333 2 4899999999999999999999999999999995 899999999999999987765532
Q ss_pred hHHHHHHHHHHHHcCCcEEEEeCCCcchHHHHhcCCcceEEEecC
Q 005041 241 MTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRD 285 (717)
Q Consensus 241 M~~Kv~aa~~a~~~gi~v~I~~g~~~~~l~~~~tg~~iGT~i~a~ 285 (717)
..|.+++..+.++++|++|.|.+.+. .||++...
T Consensus 215 -v~~~~a~~~~~~~~i~i~i~~~~~~~----------~gT~I~~~ 248 (403)
T PRK08210 215 -VIHPRAVEIAMQANIPLRIRSTYSDS----------PGTLITSL 248 (403)
T ss_pred -ccCHHHHHHHHHCCCeEEEEecCCCc----------CCcEEEec
Confidence 45678999999999999999987542 38888654
No 188
>PRK06635 aspartate kinase; Reviewed
Probab=99.93 E-value=1.1e-24 Score=241.50 Aligned_cols=231 Identities=22% Similarity=0.270 Sum_probs=174.3
Q ss_pred CeEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChhHhhHHHHhhhhccCCCcccccCccccchHHH
Q 005041 17 KRVVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKA 96 (717)
Q Consensus 17 ~~iVvKiGGs~l~~~~~~~~~~~l~~l~~~Ia~l~~~G~~vviVhGGg~~~~~~~l~~~~~~~~~~~~l~~~~~~l~~~~ 96 (717)
+++|+||||+++.+. +.+.+++++|+.+++.|+++||||||++..+..+++..+... ... .. ...+.
T Consensus 2 ~~iViK~GGs~l~~~------~~~~~~~~~i~~~~~~g~~~vvV~sg~~~~~~~l~~~~~~~~-~~~--~~----~~~~~ 68 (404)
T PRK06635 2 ALIVQKFGGTSVGDV------ERIKRVAERVKAEVEAGHQVVVVVSAMGGTTDELLDLAKEVS-PLP--DP----RELDM 68 (404)
T ss_pred CeEEEeECCcccCCH------HHHHHHHHHHHHHHHcCCCEEEEEeCCCCcHHHHHHHHHHhc-cCC--CH----HHHHH
Confidence 579999999999874 458999999999999999999999987666665554332111 000 11 12346
Q ss_pred HHHhchHHHHHHHHHHhhcCCCCcc-----ee-EecccccCchhHhhHHHHHHHHHHhCCCeEEecCCCeeeccCCCCCC
Q 005041 97 CAAVGQSSLMALYDTLFSQLDVTSS-----QL-LVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYED 170 (717)
Q Consensus 97 ~~a~G~~~~~~~~~~~l~~~g~~~~-----~~-~~~~~d~~~~~~~~~~~~~i~~lL~~g~vPVv~g~d~v~~~~~~~~~ 170 (717)
+.++|+.....++...|..+|+++. ++ ++++.+|.+......+.+.++++++.|.|||++|+-+...
T Consensus 69 ~~~~Ge~~~~~~~~~~l~~~g~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ipVi~g~~~~~~------- 141 (404)
T PRK06635 69 LLSTGEQVSVALLAMALQSLGVKARSFTGWQAGIITDSAHGKARITDIDPSRIREALDEGDVVVVAGFQGVDE------- 141 (404)
T ss_pred HhhhhHHHHHHHHHHHHHhCCCCeEEeChhhCCEEecCCCCceEeeecCHHHHHHHHhCCCEEEecCccEeCC-------
Confidence 7788988777788899999998863 33 3444444432222234688999999999999998332221
Q ss_pred CCCee----ecchHHHHHHHhhcCCCEEEEecccCccccCCCc-cccccccccccccchhHHHhcCCCCCcccCChHHHH
Q 005041 171 SSGIF----WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKV 245 (717)
Q Consensus 171 ~~~~~----~~sD~~A~~lA~~L~Ad~li~lTDV~GV~~~dP~-~p~a~~i~~it~~e~~~~~~~gs~~~~~tggM~~Kv 245 (717)
.+... +++|++|+.+|.+|+||+|+++|||||||++||+ +|++++|++|+++|+.++... |.+..|.
T Consensus 142 ~g~~~~l~rg~sD~~A~~lA~~l~A~~l~~~tDV~Gv~~~dP~~~~~a~~i~~i~~~e~~~l~~~--------g~~~~~~ 213 (404)
T PRK06635 142 DGEITTLGRGGSDTTAVALAAALKADECEIYTDVDGVYTTDPRIVPKARKLDKISYEEMLELASL--------GAKVLHP 213 (404)
T ss_pred CCCEEecCCCChHHHHHHHHHHhCCCEEEEEEcCCCCCcCCCCCCCCceECCccCHHHHHHHHHc--------CCcccCH
Confidence 23322 5999999999999999999999999999999995 899999999999999886653 4456788
Q ss_pred HHHHHHHHcCCcEEEEeCCCcchHHHHhcCCcceEEEecC
Q 005041 246 NAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRD 285 (717)
Q Consensus 246 ~aa~~a~~~gi~v~I~~g~~~~~l~~~~tg~~iGT~i~a~ 285 (717)
+++..+.+.++|++|.|++++ ..||++...
T Consensus 214 ~a~~~~~~~~i~~~i~~~~~~----------~~gT~i~~~ 243 (404)
T PRK06635 214 RSVEYAKKYNVPLRVRSSFSD----------NPGTLITGE 243 (404)
T ss_pred HHHHHHHHcCceEEEEcCCCC----------CCCCEEeeC
Confidence 899999999999999998754 348887654
No 189
>cd04253 AAK_UMPK-PyrH-Pf AAK_UMPK-PyrH-Pf: UMP kinase (UMPK)-Pf, the mostly archaeal uridine monophosphate kinase (uridylate kinase) enzymes that catalyze UMP phosphorylation and play a key role in pyrimidine nucleotide biosynthesis; regulation of this process is via feed-back control and via gene repression of carbamoyl phosphate synthetase (the first enzyme of the pyrimidine biosynthesis pathway). The UMP kinase of Pyrococcus furiosus (Pf) is known to function as a homohexamer, with GTP and UTP being allosteric effectors. Like other related enzymes (carbamate kinase, aspartokinase, and N-acetylglutamate kinase) the E. coli and most bacterial UMPKs have a conserved, N-terminal, lysine residue proposed to function in the catalysis of the phosphoryl group transfer, whereas most archaeal UMPKs (this CD) appear to lack this residue and the Pyrococcus furiosus structure has an additional Mg ion bound to the ATP molecule which is proposed to function as the catalysis instead. Members of thi
Probab=99.93 E-value=1.6e-24 Score=220.02 Aligned_cols=217 Identities=21% Similarity=0.293 Sum_probs=156.9
Q ss_pred eEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChhHhhHHHHhhhhccCCCcccccCccccchHHHH
Q 005041 18 RVVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKAC 97 (717)
Q Consensus 18 ~iVvKiGGs~l~~~~~~~~~~~l~~l~~~Ia~l~~~G~~vviVhGGg~~~~~~~l~~~~~~~~~~~~l~~~~~~l~~~~~ 97 (717)
++|||||||+++++. +.+.+.++++.|+.+.. |+++|||||||. +++.+.+.++... +... .+...++
T Consensus 1 ~iViKlGGs~l~~~~---~~~~i~~~~~~i~~~~~-~~~iiiV~GgG~-~a~~~~~~~~~~~-----~~~~--~~d~~g~ 68 (221)
T cd04253 1 RIVISLGGSVLAPEK---DADFIKEYANVLRKISD-GHKVAVVVGGGR-LAREYISVARKLG-----ASEA--FLDEIGI 68 (221)
T ss_pred CEEEEeccceeCCCC---ChHHHHHHHHHHHHHhC-CCEEEEEECCCH-HHHHHHHHHHHcC-----CCHH--HHHHhcC
Confidence 479999999998753 56778999999998866 789999999977 5665443332211 1100 0011111
Q ss_pred HHhchHHHHH-HHHHHhhcCCCCcceeEecccccCchhHhhHHHHHHHHHHhCCCeEEecCCCeeeccCCCCCCCCCeee
Q 005041 98 AAVGQSSLMA-LYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFW 176 (717)
Q Consensus 98 ~a~G~~~~~~-~~~~~l~~~g~~~~~~~~~~~d~~~~~~~~~~~~~i~~lL~~g~vPVv~g~d~v~~~~~~~~~~~~~~~ 176 (717)
... .+.. ++..++ ..++++..+ ..+.+.++|+.|.|||+.|+. + ..
T Consensus 69 ~~~---~ln~~~~~~~l-~~~~~~~~~---------------~~~~~~~~l~~g~vpv~~G~~---~-----------~~ 115 (221)
T cd04253 69 MAT---RLNARLLIAAL-GDAYPPVPT---------------SYEEALEAMFTGKIVVMGGTE---P-----------GQ 115 (221)
T ss_pred HHH---HHHHHHHHHHH-hcCCCcCCC---------------CHHHHHHHHHcCCeEEEECCC---C-----------CC
Confidence 111 1222 222333 245432211 135678899999999999721 1 15
Q ss_pred cchHHHHHHHhhcCCCEEEEecccCccccCCC-ccccccccccccccchhHHHhcCCCCCcccCC-hHHHHHHHHHHHHc
Q 005041 177 DNDSLAGLLALELKADLLVLLSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGDKSRVGRGG-MTAKVNAAYCAACA 254 (717)
Q Consensus 177 ~sD~~A~~lA~~L~Ad~li~lTDV~GV~~~dP-~~p~a~~i~~it~~e~~~~~~~gs~~~~~tgg-M~~Kv~aa~~a~~~ 254 (717)
++|++|+.+|.+|+||+|+++|||||||++|| .+|++++|++|+++|+.++.... . ...|+ |..|+.++..+.+.
T Consensus 116 s~D~~a~~lA~~l~a~~li~~tdVdGVy~~dP~~~~~a~~i~~i~~~e~~~~~~~~-~--~~~g~~~~~d~~a~~~~~~~ 192 (221)
T cd04253 116 STDAVAALLAERLGADLLINATNVDGVYSKDPRKDPDAKKFDRLSADELIDIVGKS-S--WKAGSNEPFDPLAAKIIERS 192 (221)
T ss_pred ccHHHHHHHHHHcCCCEEEEEeCCCeeECCCCCCCCCCeEeeEeCHHHHHHHccCC-C--cCCCCCcchHHHHHHHHHHC
Confidence 78999999999999999999999999999999 49999999999999887754321 1 22233 67899999999999
Q ss_pred CCcEEEEeCCCcchHHHHhcCCcceEEE
Q 005041 255 GIPVVITSGFAMDSIIKVLEGKRVGTLF 282 (717)
Q Consensus 255 gi~v~I~~g~~~~~l~~~~tg~~iGT~i 282 (717)
|++++|+||+.|+.+.+.++|+..||.+
T Consensus 193 gi~~~I~~g~~p~~l~~~l~g~~~GT~I 220 (221)
T cd04253 193 GIKTIVVDGRDPENLERALKGEFVGTII 220 (221)
T ss_pred CCeEEEECCCCccHHHHHHCCCCCCeEe
Confidence 9999999999999999999998889986
No 190
>PRK09411 carbamate kinase; Reviewed
Probab=99.92 E-value=4.9e-24 Score=219.29 Aligned_cols=242 Identities=21% Similarity=0.249 Sum_probs=174.1
Q ss_pred CeEEEEeCCcccccCCCccc----HHHHHHHHHHHHHHHHCCCeEEEEecChhHhhHHHHhhhhccCCCcccccCccccc
Q 005041 17 KRVVVKVGTAVVTRSDGRLA----LGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNEL 92 (717)
Q Consensus 17 ~~iVvKiGGs~l~~~~~~~~----~~~l~~l~~~Ia~l~~~G~~vviVhGGg~~~~~~~l~~~~~~~~~~~~l~~~~~~l 92 (717)
+++||.+||+++..++.+.+ ++++...++.|+.+.+. |++||+||.|||+|..+++.... .+. ..+.|
T Consensus 2 ~~iVvAlGGNAl~~~g~~~~~~~q~~~v~~~a~~ia~l~~~-~~~vitHGNGPQVG~l~~~~~~~-----~~~--~~~pl 73 (297)
T PRK09411 2 KTLVVALGGNALLQRGEALTAENQYRNIASAVPALARLARS-YRLAIVHGNGPQVGLLALQNLAW-----KEV--EPYPL 73 (297)
T ss_pred CeEEEEcCchhhcCCCCCcCHHHHHHHHHHHHHHHHHHHHc-CCEEEEeCCccHHHHHHHHHHhh-----cCC--CCCCc
Confidence 57999999999998654332 45788999999999987 99999999999999876543221 111 34556
Q ss_pred hHHHHHHhchHHHHHHHHHHhhcCCCCc------ceeEecccc--cCch-----------------------------h-
Q 005041 93 DGKACAAVGQSSLMALYDTLFSQLDVTS------SQLLVTDSD--FRDE-----------------------------D- 134 (717)
Q Consensus 93 ~~~~~~a~G~~~~~~~~~~~l~~~g~~~------~~~~~~~~d--~~~~-----------------------------~- 134 (717)
...+..+-|..+.+ ++..|...++.. .|+.+...| |.+. +
T Consensus 74 d~~~a~sqG~iGy~--l~q~l~~~~~~~~v~t~~Tq~~Vd~~DpaF~~PtKpiG~~y~~e~a~~l~~e~g~~~~~dg~g~ 151 (297)
T PRK09411 74 DVLVAESQGMIGYM--LAQSLSAQPQMPPVTTVLTRIEVSPDDPAFLQPEKFIGPVYQPEEQEALEAAYGWQMKRDGKYL 151 (297)
T ss_pred hhhhhhcccHHHHH--HHHHHHHcCCCCCeEEEEEEEEECCCCccccCCCCccCCccCHHHHHHHHHhcCCEEEecCCce
Confidence 55566677777764 345555544321 122222111 1110 0
Q ss_pred -Hh--------hHHHHHHHHHHhCCCeEEecCCCeeeccCCCCCCCCCee-ecchHHHHHHHhhcCCCEEEEecccCccc
Q 005041 135 -FR--------KQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIF-WDNDSLAGLLALELKADLLVLLSDVEGLY 204 (717)
Q Consensus 135 -~~--------~~~~~~i~~lL~~g~vPVv~g~d~v~~~~~~~~~~~~~~-~~sD~~A~~lA~~L~Ad~li~lTDV~GV~ 204 (717)
++ ..+.+.|+.||++|+|||.+|...++.. .+..+... +|+|.+|+.+|.+|+||+|+|+|||||||
T Consensus 152 rrVVpSP~P~~iVe~~~I~~Ll~~G~IVI~~gGGGIPV~---~~~~G~e~vIDkD~~Aa~LA~~L~Ad~LIiLTDVdGV~ 228 (297)
T PRK09411 152 RRVVASPQPRKILDSEAIELLLKEGHVVICSGGGGVPVT---EDGAGSEAVIDKDLAAALLAEQINADGLVILTDADAVY 228 (297)
T ss_pred EEEccCCCCcceECHHHHHHHHHCCCEEEecCCCCCCeE---EcCCCeEEecCHHHHHHHHHHHhCCCEEEEEeCchhhc
Confidence 00 0347899999999999998864443331 12223333 99999999999999999999999999999
Q ss_pred cCCCccccccccccccccchhHHHhcCCCCCcccCChHHHHHHHHHHHHcCC-cEEEEeCCCcchHHHHhcCCcceEEEe
Q 005041 205 SGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGI-PVVITSGFAMDSIIKVLEGKRVGTLFH 283 (717)
Q Consensus 205 ~~dP~~p~a~~i~~it~~e~~~~~~~gs~~~~~tggM~~Kv~aa~~a~~~gi-~v~I~~g~~~~~l~~~~tg~~iGT~i~ 283 (717)
+++ .+|++++|++++.+|+..++. .+|||.||+++|.++++++. +++|.+ ++.+.+.+.|+ .||.+.
T Consensus 229 ~n~-~~p~~~~I~~it~~e~~~~~~-------~~GgM~pKVeAA~~~v~~~g~~a~I~~---l~~~~~~l~G~-~GT~I~ 296 (297)
T PRK09411 229 ENW-GTPQQRAIRHATPDELAPFAK-------ADGAMGPKVTAVSGYVRSRGKPAWIGA---LSRIEETLAGE-AGTCIS 296 (297)
T ss_pred cCC-CCCCCcCCCCcCHHHHHHhcc-------CCCCcHHHHHHHHHHHHhCCCeEEECC---hhHHHHHHCCC-CCeEEe
Confidence 874 478899999999999876442 48999999999999888754 498875 67777888887 699874
No 191
>COG0528 PyrH Uridylate kinase [Nucleotide transport and metabolism]
Probab=99.92 E-value=6.9e-24 Score=208.15 Aligned_cols=231 Identities=19% Similarity=0.240 Sum_probs=172.6
Q ss_pred ccCCeEEEEeCCcccccCCC-cccHHHHHHHHHHHHHHHHCCCeEEEEecChhHhhHHHHhhhhccCCCcccccCccccc
Q 005041 14 KNVKRVVVKVGTAVVTRSDG-RLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNEL 92 (717)
Q Consensus 14 ~~~~~iVvKiGGs~l~~~~~-~~~~~~l~~l~~~Ia~l~~~G~~vviVhGGg~~~~~~~l~~~~~~~~~~~~l~~~~~~l 92 (717)
.+++++|+||||+++...++ .++.+.+.+++++|+++.+.|+++.||.|||.-+.. ....+.+. +.. .+
T Consensus 3 ~~~~rillkLsGe~l~g~~~~gid~~~i~~~a~~i~~~~~~g~eV~iVvGGGni~Rg-~~~~~~g~-------~r~--~~ 72 (238)
T COG0528 3 PKYMRILLKLSGEALAGEQGFGIDPEVLDRIANEIKELVDLGVEVAVVVGGGNIARG-YIGAAAGM-------DRV--TA 72 (238)
T ss_pred cceEEEEEEeecceecCCCCCCCCHHHHHHHHHHHHHHHhcCcEEEEEECCCHHHHh-HHHHHcCC-------chh--hh
Confidence 34578999999999998665 588899999999999999999999999999874333 22222222 111 12
Q ss_pred hHHHHHHhchHHHHHHHHHHhhcCCCCcceeEecccccC-chhHhhHHHHHHHHHHhCCCeEEecCCCeeeccCCCCCCC
Q 005041 93 DGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFR-DEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDS 171 (717)
Q Consensus 93 ~~~~~~a~G~~~~~~~~~~~l~~~g~~~~~~~~~~~d~~-~~~~~~~~~~~i~~lL~~g~vPVv~g~d~v~~~~~~~~~~ 171 (717)
+..++.+.-...+ ++...|.+.|+++. + .+.-... -..+| ..+...+.|+.|.|+|+.| ..
T Consensus 73 D~mGmlaTvmNal--~L~~aL~~~~~~~~-v-~sai~~~~~~e~~--~~~~A~~~l~~grVvIf~g------------Gt 134 (238)
T COG0528 73 DYMGMLATVMNAL--ALQDALERLGVDTR-V-QSAIAMPQVAEPY--SRREAIRHLEKGRVVIFGG------------GT 134 (238)
T ss_pred hHHHHHHHHHHHH--HHHHHHHhcCCcce-e-cccccCccccCcc--CHHHHHHHHHcCCEEEEeC------------CC
Confidence 2334444433322 45688888887665 1 1111110 01122 2456777899999999975 13
Q ss_pred CCeeecchHHHHHHHhhcCCCEEEEecc-cCccccCCC-ccccccccccccccchhHHHhcCCCCCcccCChHHHHHHHH
Q 005041 172 SGIFWDNDSLAGLLALELKADLLVLLSD-VEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAY 249 (717)
Q Consensus 172 ~~~~~~sD~~A~~lA~~L~Ad~li~lTD-V~GV~~~dP-~~p~a~~i~~it~~e~~~~~~~gs~~~~~tggM~~Kv~aa~ 249 (717)
+.++.++|++|+.+|..++||.|+..|+ |||||++|| ++|||+++++||++|+.+... . .....|..
T Consensus 135 g~P~fTTDt~AALrA~ei~ad~ll~atn~VDGVY~~DPkk~pdA~~~~~Lty~e~l~~~l---------~--vmD~tA~~ 203 (238)
T COG0528 135 GNPGFTTDTAAALRAEEIEADVLLKATNKVDGVYDADPKKDPDAKKYDTLTYDEVLKIGL---------K--VMDPTAFS 203 (238)
T ss_pred CCCCCchHHHHHHHHHHhCCcEEEEeccCCCceeCCCCCCCCCceecccCCHHHHHHhcC---------e--eecHHHHH
Confidence 4557999999999999999999999995 999999999 699999999999999976321 1 34678888
Q ss_pred HHHHcCCcEEEEeCCCcchHHHHhcCCcceEEEe
Q 005041 250 CAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFH 283 (717)
Q Consensus 250 ~a~~~gi~v~I~~g~~~~~l~~~~tg~~iGT~i~ 283 (717)
.+.++++|++++|.+.++++...+.|+..||.+.
T Consensus 204 l~~~~~i~i~Vfn~~~~~~l~~~~~ge~~gT~V~ 237 (238)
T COG0528 204 LARDNGIPIIVFNINKPGNLKRALKGEEVGTIVE 237 (238)
T ss_pred HHHHcCCcEEEEeCCCCccHHHHHcCCCCceEec
Confidence 9999999999999999999999999999999874
No 192
>COG0527 LysC Aspartokinases [Amino acid transport and metabolism]
Probab=99.91 E-value=1.3e-23 Score=231.31 Aligned_cols=238 Identities=22% Similarity=0.296 Sum_probs=183.0
Q ss_pred eEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChhHhhHHHHhhhhccCC-----------------
Q 005041 18 RVVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNS----------------- 80 (717)
Q Consensus 18 ~iVvKiGGs~l~~~~~~~~~~~l~~l~~~Ia~l~~~G~~vviVhGGg~~~~~~~l~~~~~~~~----------------- 80 (717)
++|.||||+++.+. +.+.+.++.|+...+.|.++|+|.++++.++..+++..+....
T Consensus 3 ~iV~KFGGTSva~~------e~i~~va~iv~~~~~~g~~vVVVvSA~~~vTd~Lv~~a~~~~~~~~~~~~~~~~~~~~el 76 (447)
T COG0527 3 LIVQKFGGTSVADA------ERILRVADIVKEDSEEGVKVVVVVSAMGGVTDLLVALAEGAESGRDAVAEQRHRDIASEL 76 (447)
T ss_pred eEEEEeCCcccCCH------HHHHHHHHHHHhhhhcCCcEEEEECCCCCchHHHHHHHhhcccccchhHHHHHHHHHHHH
Confidence 79999999999985 4689999999998888999999999988788777665543211
Q ss_pred --Cccc---ccCcc----------------ccchHHHHHHhchHHHHHHHHHHhhcCCCCccee------EecccccCch
Q 005041 81 --SLAD---LQKPQ----------------NELDGKACAAVGQSSLMALYDTLFSQLDVTSSQL------LVTDSDFRDE 133 (717)
Q Consensus 81 --~~~~---l~~~~----------------~~l~~~~~~a~G~~~~~~~~~~~l~~~g~~~~~~------~~~~~d~~~~ 133 (717)
.+.. +.... ..-....+.+.|+.....++...|+..|+++..+ +.++.++.+.
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~ilS~GE~~Sa~lla~~L~~~Gv~A~~~~~~~~~i~t~~~~~~a 156 (447)
T COG0527 77 ILDPFIAARLAEVIAEFKKVLLGIALLGEVSPRERDELLSLGERLSAALLAAALNALGVDARSLDGRQAGIATDSNHGNA 156 (447)
T ss_pred hhcchhhhhHhhhHhhhhHHhhhhhhccCCCHHHHHHHHhhchHHHHHHHHHHHHhCCCceEEEchHHceeeecCccccc
Confidence 1100 00000 0012346789999988889999999999887533 2344455554
Q ss_pred hHhhHHHHH-HHHHHhCCCeEEecCCCeeeccCCCCCCCCC--ee--ecchHHHHHHHhhcCCCEEEEecccCccccCCC
Q 005041 134 DFRKQLYDT-VQSLLDLRVIPIFNENDAVSTRKAPYEDSSG--IF--WDNDSLAGLLALELKADLLVLLSDVEGLYSGPP 208 (717)
Q Consensus 134 ~~~~~~~~~-i~~lL~~g~vPVv~g~d~v~~~~~~~~~~~~--~~--~~sD~~A~~lA~~L~Ad~li~lTDV~GV~~~dP 208 (717)
.......+. +..+++.|.|||++|+..... .|. ++ ++||+.|+.||++|+||.|.++|||||||+.||
T Consensus 157 ~i~~~~~~~~l~~~~~~~~v~Vv~GF~G~~~-------~G~~tTLGRGGSD~SA~~laa~l~Ad~~~I~TDVdGI~TaDP 229 (447)
T COG0527 157 RILDEDSERRLLRLLEEGKVPVVAGFQGINE-------DGETTTLGRGGSDYSAAALAAALGADEVEIWTDVDGVYTADP 229 (447)
T ss_pred ccchhhhhhhHHHHhcCCcEEEecCceeecC-------CCCEEEeCCCcHHHHHHHHHHHcCCCEEEEEECCCCCccCCC
Confidence 433333455 888999999999998554333 222 23 999999999999999999999999999999999
Q ss_pred c-cccccccccccccchhHHHhcCCCCCcccCChHHHHHHHHHHHHcCCcEEEEeCCCcchHHHHhcCCcceEEEecC
Q 005041 209 S-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRD 285 (717)
Q Consensus 209 ~-~p~a~~i~~it~~e~~~~~~~gs~~~~~tggM~~Kv~aa~~a~~~gi~v~I~~g~~~~~l~~~~tg~~iGT~i~a~ 285 (717)
+ .|++++|++||++|+.++...|.+ ..+.++...+.+.+||++|.|.+.|+ ..||++...
T Consensus 230 RiVp~Ar~i~~isyeEa~ELA~~GAk--------VLHprav~pa~~~~Ip~~i~~t~~p~---------~~GTlI~~~ 290 (447)
T COG0527 230 RIVPDARLLPEISYEEALELAYLGAK--------VLHPRAVEPAMRSGIPLRIKNTFNPD---------APGTLITAE 290 (447)
T ss_pred CCCCcceEcCccCHHHHHHHHHCCch--------hcCHHHHHHHHhcCCcEEEEecCCCC---------CCceEEecC
Confidence 6 999999999999999998776644 44668999999999999999988774 479999877
No 193
>PRK07431 aspartate kinase; Provisional
Probab=99.91 E-value=1.6e-23 Score=242.25 Aligned_cols=233 Identities=21% Similarity=0.268 Sum_probs=171.8
Q ss_pred CeEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChhHhhHHHHhhhhccCCCcccccCccccchHHH
Q 005041 17 KRVVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKA 96 (717)
Q Consensus 17 ~~iVvKiGGs~l~~~~~~~~~~~l~~l~~~Ia~l~~~G~~vviVhGGg~~~~~~~l~~~~~~~~~~~~l~~~~~~l~~~~ 96 (717)
+++|+||||+++.|. +.+.+++++|+.+++.|+++||||||++.+.+.+++...... + .... -..+.
T Consensus 2 ~~iViKfGGss~~~~------~~i~~~a~~I~~~~~~g~~vvvV~sa~g~~t~~l~~~~~~~t----~--~~~~-~~~~~ 68 (587)
T PRK07431 2 ALIVQKFGGTSVGSV------ERIQAVAQRIARTKEAGNDVVVVVSAMGKTTDELVKLAKEIS----S--NPPR-REMDM 68 (587)
T ss_pred CeEEEEECchhcCCH------HHHHHHHHHHHHHHHCCCCEEEEECCCCchhHHHHHHHHHhc----c--CCCH-HHHHH
Confidence 579999999999764 458999999999999999999999976667666544332221 1 0000 12346
Q ss_pred HHHhchHHHHHHHHHHhhcCCCCccee------EecccccCchhHhhHHHHHHHHHHhCCCeEEecCCCeeeccCCCCCC
Q 005041 97 CAAVGQSSLMALYDTLFSQLDVTSSQL------LVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYED 170 (717)
Q Consensus 97 ~~a~G~~~~~~~~~~~l~~~g~~~~~~------~~~~~d~~~~~~~~~~~~~i~~lL~~g~vPVv~g~d~v~~~~~~~~~ 170 (717)
+.+.|+.....++...|..+|+++..+ ++++..+..........+.+.++++.|.|||++|+...... .
T Consensus 69 ~ls~Ge~~s~~l~~~~l~~~gi~a~~l~~~~~~~~~~~~~~~~~i~~~~~~~l~~~l~~g~vpVv~g~~g~~~~-----~ 143 (587)
T PRK07431 69 LLSTGEQVSIALLSMALHELGQPAISLTGAQVGIVTESEHGRARILEIKTDRIQRHLDAGKVVVVAGFQGISLS-----S 143 (587)
T ss_pred HHHHhHHHHHHHHHHHHHHCCCCeEEechhHcCeEecCCCCceeeeeccHHHHHHHHhCCCeEEecCCcCCCCC-----C
Confidence 778888777777888899999886433 23333322111111235789999999999999984322210 0
Q ss_pred CCCe----eecchHHHHHHHhhcCCCEEEEecccCccccCCCc-cccccccccccccchhHHHhcCCCCCcccCChHHHH
Q 005041 171 SSGI----FWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKV 245 (717)
Q Consensus 171 ~~~~----~~~sD~~A~~lA~~L~Ad~li~lTDV~GV~~~dP~-~p~a~~i~~it~~e~~~~~~~gs~~~~~tggM~~Kv 245 (717)
.+.. ++++|++|+.+|.+|+|++|+++|||||||++||+ +|++++|++|+++|+.++...| .++|. +
T Consensus 144 ~g~~~~lgrggsD~~A~~lA~~l~A~~l~i~TDVdGVyt~DP~~~~~a~~i~~i~~~e~~el~~~G------~~v~~--~ 215 (587)
T PRK07431 144 NLEITTLGRGGSDTSAVALAAALGADACEIYTDVPGVLTTDPRLVPEAQLMDEISCDEMLELASLG------ASVLH--P 215 (587)
T ss_pred CCCEeecCCCchHHHHHHHHHHcCCCEEEEEeCCCccCcCCCCCCCCCeECCCcCHHHHHHHHhCC------CceEh--H
Confidence 1222 27899999999999999999999999999999995 8999999999999999876544 56776 6
Q ss_pred HHHHHHHHcCCcEEEEeCCCcchHHHHhcCCcceEEEecC
Q 005041 246 NAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRD 285 (717)
Q Consensus 246 ~aa~~a~~~gi~v~I~~g~~~~~l~~~~tg~~iGT~i~a~ 285 (717)
+++..+.++|+|++|.|++.. ..||++...
T Consensus 216 ~a~~~~~~~~i~i~i~~~~~~----------~~GT~i~~~ 245 (587)
T PRK07431 216 RAVEIARNYGVPLVVRSSWSD----------APGTLVTSP 245 (587)
T ss_pred HHHHHHHHcCCcEEEecCCCC----------CCCeEEEeC
Confidence 899999999999999998721 348888754
No 194
>COG0549 ArcC Carbamate kinase [Amino acid transport and metabolism]
Probab=99.89 E-value=1.3e-21 Score=195.35 Aligned_cols=255 Identities=23% Similarity=0.317 Sum_probs=185.8
Q ss_pred CeEEEEeCCcccccCCCcc----cHHHHHHHHHHHHHHHHCCCeEEEEecChhHhhHHHHhhhhccCCCcccccCccccc
Q 005041 17 KRVVVKVGTAVVTRSDGRL----ALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNEL 92 (717)
Q Consensus 17 ~~iVvKiGGs~l~~~~~~~----~~~~l~~l~~~Ia~l~~~G~~vviVhGGg~~~~~~~l~~~~~~~~~~~~l~~~~~~l 92 (717)
+++||.+||+++..++..+ ..+++...+++|+.|.+.|+++||.||.|||+|..++...... ++. ....+.|
T Consensus 1 ~~iVvALGGNAll~~g~~~tae~Q~~~v~~ta~~i~~l~~~g~e~VitHGNGPQVG~l~lq~~aa~--~~~--~~p~~PL 76 (312)
T COG0549 1 KRIVVALGGNALLQRGEPLTAEAQYEAVKITAEQIADLIASGYEVVITHGNGPQVGLLLLQNEAAD--SEK--GVPAYPL 76 (312)
T ss_pred CeEEEEecchhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCeEEEEcCCCchHHHHHHHhhhhc--ccc--CCCCccH
Confidence 4699999999999875432 3577899999999999999999999999999999765422211 111 1223445
Q ss_pred hHHHHHHhchHHHH--HHHHHHhhcCCCC--c----ceeEecccc--cCc------------------------------
Q 005041 93 DGKACAAVGQSSLM--ALYDTLFSQLDVT--S----SQLLVTDSD--FRD------------------------------ 132 (717)
Q Consensus 93 ~~~~~~a~G~~~~~--~~~~~~l~~~g~~--~----~~~~~~~~d--~~~------------------------------ 132 (717)
.-.++.+-|+.+.+ ..+.+.|...++. . .|+.+...| |.+
T Consensus 77 d~~~AmsQG~IGy~l~qal~n~l~~~~~~~~v~tvvTqv~VD~nDPAF~nPtKpIGpfY~~eea~~l~~~~gw~~keD~~ 156 (312)
T COG0549 77 DVLVAMSQGMIGYMLQQALRNELPRRGLEKPVVTVVTQVEVDANDPAFLNPTKPIGPFYSEEEAEELAKEYGWVFKEDAG 156 (312)
T ss_pred HHHhHhhhhHHHHHHHHHHHHHHhhcCCCCceeEEEEEEEEcCCCccccCCCCCCCCCcCHHHHHHHHhhcCcEEEecCC
Confidence 55555666766654 3455677777753 1 133222111 211
Q ss_pred hhHhh----------HHHHHHHHHHhCCCeEEecCCCeeeccCCCCCCCCC-eeecchHHHHHHHhhcCCCEEEEecccC
Q 005041 133 EDFRK----------QLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSG-IFWDNDSLAGLLALELKADLLVLLSDVE 201 (717)
Q Consensus 133 ~~~~~----------~~~~~i~~lL~~g~vPVv~g~d~v~~~~~~~~~~~~-~~~~sD~~A~~lA~~L~Ad~li~lTDV~ 201 (717)
+++++ ...+.|+.|+++|.++|..|...|....-+..-.|. .++|.|..++.||.+++||.|+++||||
T Consensus 157 rG~RRVVpSP~P~~IvE~~~Ik~L~~~g~vVI~~GGGGIPVv~~~~~~~GVeAVIDKDlasalLA~~i~AD~liILTdVd 236 (312)
T COG0549 157 RGYRRVVPSPKPVRIVEAEAIKALLESGHVVIAAGGGGIPVVEEGAGLQGVEAVIDKDLASALLAEQIDADLLIILTDVD 236 (312)
T ss_pred CCeeEecCCCCCccchhHHHHHHHHhCCCEEEEeCCCCcceEecCCCcceeeEEEccHHHHHHHHHHhcCCEEEEEeccc
Confidence 10100 236899999999999999987776653211100011 2499999999999999999999999999
Q ss_pred ccccCCCccccccccccccccchhHHHhcCCCCCcccCChHHHHHHHHHHHHcCCc-EEEEeCCCcchHHHHhcCCcceE
Q 005041 202 GLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIP-VVITSGFAMDSIIKVLEGKRVGT 280 (717)
Q Consensus 202 GV~~~dP~~p~a~~i~~it~~e~~~~~~~gs~~~~~tggM~~Kv~aa~~a~~~gi~-v~I~~g~~~~~l~~~~tg~~iGT 280 (717)
+||-++. .|+.+.+.+++.+|+.+++..+ .+..|+|.|||+||..+++++-+ ++|.+ .+.+.+.+.|+ .||
T Consensus 237 ~Vy~n~g-kp~q~~L~~v~~~e~~~yl~eg---~Fa~GSM~PKVeAai~Fv~~~gk~A~Its---Le~~~~~l~g~-~GT 308 (312)
T COG0549 237 AVYVNFG-KPNQQALDRVTVDEMEKYLAEG---QFAAGSMGPKVEAAISFVENTGKPAIITS---LENAEAALEGK-AGT 308 (312)
T ss_pred hheecCC-CccchhhcccCHHHHHHHHhcC---CCCCCCccHHHHHHHHHHHcCCCceEECc---HHHHHHHhccC-CCc
Confidence 9998875 4678999999999999988765 47889999999999999998666 88887 77788888875 788
Q ss_pred EEe
Q 005041 281 LFH 283 (717)
Q Consensus 281 ~i~ 283 (717)
.+.
T Consensus 309 ~I~ 311 (312)
T COG0549 309 VIV 311 (312)
T ss_pred Eec
Confidence 765
No 195
>PRK08373 aspartate kinase; Validated
Probab=99.89 E-value=3.5e-22 Score=212.60 Aligned_cols=226 Identities=21% Similarity=0.245 Sum_probs=164.2
Q ss_pred cCCeEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChhHhhHHHHhhhhccCC--------Cccc--
Q 005041 15 NVKRVVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNS--------SLAD-- 84 (717)
Q Consensus 15 ~~~~iVvKiGGs~l~~~~~~~~~~~l~~l~~~Ia~l~~~G~~vviVhGGg~~~~~~~l~~~~~~~~--------~~~~-- 84 (717)
+++++|+||||+++.+. +.+.++.|+.. ..|.++|+|+|+.+.++..+++....... .+..
T Consensus 2 ~~~m~V~KFGGsSv~~~--------~~~v~~ii~~~-~~~~~vvVVVSA~~gvTd~L~~l~~~~~~~~l~~i~~~h~~~~ 72 (341)
T PRK08373 2 VEKMIVVKFGGSSVRYD--------FEEALELVKYL-SEENEVVVVVSALKGVTDKLLKLAETFDKEALEEIEEIHEEFA 72 (341)
T ss_pred CCCCEEEEECCcchHhH--------HHHHHHHHHHH-hcCCCEEEEecCCchHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 56789999999999873 56677777643 45889999999998899877654432100 0000
Q ss_pred --c--c----------------CccccchHHHHHHhchHHHHHHHHHHhhcCCCCcc-----eeEecccccCchhH----
Q 005041 85 --L--Q----------------KPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSS-----QLLVTDSDFRDEDF---- 135 (717)
Q Consensus 85 --l--~----------------~~~~~l~~~~~~a~G~~~~~~~~~~~l~~~g~~~~-----~~~~~~~d~~~~~~---- 135 (717)
+ + ..........+.++|+.....++...|...|+++. +++.+++++.+...
T Consensus 73 ~~L~~~~~~~~~~l~~~~~~~~~~~~~~~~D~ils~GE~lSa~lla~~L~~~Gi~a~~l~~~~~i~t~~~~~~a~i~~~~ 152 (341)
T PRK08373 73 KRLGIDLEILSPYLKKLFNSRPDLPSEALRDYILSFGERLSAVLFAEALENEGIKGKVVDPWEILEAKGSFGNAFIDIKK 152 (341)
T ss_pred HHhccchhhHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHCCCceEEEeHHHheeecCCccceeechhh
Confidence 0 0 00000113467899998888889999999998875 34556666654321
Q ss_pred hhHHHHHHHHHHhCCCeEEecCCCeeeccCCCCCCCCCe--e--ecchHHHHHHHhhcCCCEEEEecccCccccCCCc-c
Q 005041 136 RKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGI--F--WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-E 210 (717)
Q Consensus 136 ~~~~~~~i~~lL~~g~vPVv~g~d~v~~~~~~~~~~~~~--~--~~sD~~A~~lA~~L~Ad~li~lTDV~GV~~~dP~-~ 210 (717)
...+.+.+.++|+.|.|||++|+.. . ..|.. + ++||++|+.+|.+|+|++++++|||||||++||+ +
T Consensus 153 s~~~~~~l~~~l~~g~VpVv~Gf~g--~------~~G~~ttLGRGGSD~tA~~lA~~L~A~~v~i~TDVdGVytaDP~~v 224 (341)
T PRK08373 153 SKRNVKILYELLERGRVPVVPGFIG--N------LNGFRATLGRGGSDYSAVALGVLLNAKAVLIMSDVEGIYTADPKLV 224 (341)
T ss_pred hhhhHHHHHHHHhCCcEEEEeCCcc--C------CCCeEEEcCCCchHHHHHHHHHHcCCCEEEEEECCCccCCCCCCCC
Confidence 1123578999999999999998332 1 12322 2 6999999999999999999999999999999995 8
Q ss_pred ccccccccccccchhHHHhcCCCCCcccCChHHHHHHHHHHHHcCCcEEEEeCCCc
Q 005041 211 PNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAM 266 (717)
Q Consensus 211 p~a~~i~~it~~e~~~~~~~gs~~~~~tggM~~Kv~aa~~a~~~gi~v~I~~g~~~ 266 (717)
|++++|++||++|+.++. ..||..+...|...++.++|++|.|-+.+
T Consensus 225 ~~A~~i~~isy~Ea~ela---------~~Gakvlhp~ai~~a~~~Ipi~v~~t~~~ 271 (341)
T PRK08373 225 PSARLIPYLSYDEALIAA---------KLGMKALHWKAIEPVKGKIPIIFGRTRDW 271 (341)
T ss_pred CCCeEcccCCHHHHHHHH---------HCcChhhhHHHHHHHHcCCcEEEecCCCC
Confidence 999999999999998754 45677677767765555999999997655
No 196
>TIGR00657 asp_kinases aspartate kinase. The Lys-sensitive enzyme of Bacillus subtilis resembles the E. coli form but is an alpha 2/beta 2 heterotetramer, where the beta subunit is translated from an in-phase alternative initiator at Met-246. This may be a feature of a number of closely related forms, including a paralog from B. subtilis.
Probab=99.89 E-value=2.9e-22 Score=224.18 Aligned_cols=238 Identities=22% Similarity=0.321 Sum_probs=177.4
Q ss_pred eEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChhHhhHHHHhhhhccCCCcc-c----cc------
Q 005041 18 RVVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLA-D----LQ------ 86 (717)
Q Consensus 18 ~iVvKiGGs~l~~~~~~~~~~~l~~l~~~Ia~l~~~G~~vviVhGGg~~~~~~~l~~~~~~~~~~~-~----l~------ 86 (717)
++|+||||+++.+. +.+.++++.|......|+++|+|||+++.++..+++.......... . +.
T Consensus 2 ~~V~KFGGssv~~~------~~~~~v~~~i~~~~~~~~~~vvVvSA~~~~Td~L~~~~~~~~~~~~~~~~~~i~~~~~~~ 75 (441)
T TIGR00657 2 LIVQKFGGTSVGNA------ERIRRVAKIVLKEKKKGNQVVVVVSAMAGVTDALVELAEQASPGPSKEFLEKIREKHIEI 75 (441)
T ss_pred CEEEEeCcccCCCH------HHHHHHHHHHHHHHhcCCCEEEEEcCCCCCHHHHHHHHHHHhcCCchHHHHHHHHHHHHH
Confidence 57999999999985 3588999999988888999999999999999887654432211000 0 00
Q ss_pred --------------C-cc----c---cchHHHHHHhchHHHHHHHHHHhhcCCCCccee------EecccccCchh-Hhh
Q 005041 87 --------------K-PQ----N---ELDGKACAAVGQSSLMALYDTLFSQLDVTSSQL------LVTDSDFRDED-FRK 137 (717)
Q Consensus 87 --------------~-~~----~---~l~~~~~~a~G~~~~~~~~~~~l~~~g~~~~~~------~~~~~d~~~~~-~~~ 137 (717)
. .+ . ......+.+.|+.....++...|...|+++..+ +++++++.+.. ...
T Consensus 76 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~ils~GE~~s~~l~~~~l~~~Gi~a~~l~~~~~~l~t~~~~~~~~~~~~ 155 (441)
T TIGR00657 76 LERLIPQAIAEELKRLLDAELVLEEKPREMDRILSFGERLSAALLSAALEELGVKAVSLLGGEAGILTDSNFGRARVIIE 155 (441)
T ss_pred HHHhhhHHHHHHHHHHHHHHHhhhcCcchHhheecHHHHHHHHHHHHHHHhCCCCCEEEEcCcceEEecCCCCceeecHh
Confidence 0 00 0 001234567787766667889999999876543 34455554433 334
Q ss_pred HHHHHHHHHHhCCCeEEecCCCeeeccCCCCCCCCCee----ecchHHHHHHHhhcCCCEEEEecccCccccCCCc-ccc
Q 005041 138 QLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIF----WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPN 212 (717)
Q Consensus 138 ~~~~~i~~lL~~g~vPVv~g~d~v~~~~~~~~~~~~~~----~~sD~~A~~lA~~L~Ad~li~lTDV~GV~~~dP~-~p~ 212 (717)
.+.+.+..+++.|.|||++|+.+... .|... +++|++|+.+|.+|+|++|+++|||||||++||+ +|+
T Consensus 156 ~~~~~l~~~l~~~~vpVv~G~~g~~~-------~g~~~~lgrggsD~~A~~lA~~l~a~~l~~~tDV~Gv~~~DP~~~~~ 228 (441)
T TIGR00657 156 ILTERLEPLLEEGIIPVVAGFQGATE-------KGETTTLGRGGSDYTAALLAAALKADECEIYTDVDGIYTTDPRIVPD 228 (441)
T ss_pred hhHHHHHHHHhcCCEEEEeCcEeeCC-------CCCEeecCCCchHHHHHHHHHHcCCCEEEEEECCCCCCcCCCCCCCC
Confidence 56789999999999999998322211 23222 5899999999999999999999999999999995 899
Q ss_pred ccccccccccchhHHHhcCCCCCcccCChHHHHHHHHHHHHcCCcEEEEeCCCcchHHHHhcCCcceEEEecC
Q 005041 213 SKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRD 285 (717)
Q Consensus 213 a~~i~~it~~e~~~~~~~gs~~~~~tggM~~Kv~aa~~a~~~gi~v~I~~g~~~~~l~~~~tg~~iGT~i~a~ 285 (717)
++++++|+++|+.++...| .+..+.+++..+.+.++|++|.|++.|+ ..||++...
T Consensus 229 a~~i~~is~~ea~el~~~G--------~~v~~~~a~~~~~~~~i~i~i~~~~~~~---------~~GT~I~~~ 284 (441)
T TIGR00657 229 ARRIDEISYEEMLELASFG--------AKVLHPRTLEPAMRAKIPIVVKSTFNPE---------APGTLIVAS 284 (441)
T ss_pred CeECCccCHHHHHHHHhcC--------CcccCHHHHHHHHHcCCeEEEecCCCCC---------CCceEEEeC
Confidence 9999999999999876543 4567888999999999999999998774 359988755
No 197
>cd04244 AAK_AK-LysC-like AAK_AK-LysC-like: Amino Acid Kinase Superfamily (AAK), AK-LysC-like; this CD includes the N-terminal catalytic aspartokinase (AK) domain of the lysine-sensitive AK isoenzyme found in higher plants. The lysine-sensitive AK isoenzyme is a monofunctional protein. It is involved in the overall regulation of the aspartate pathway and can be synergistically inhibited by S-adenosylmethionine. Also included in this CD is an uncharacterized LysC-like AK found in Euryarchaeota and some bacteria. AK catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP.
Probab=99.89 E-value=7e-22 Score=208.39 Aligned_cols=228 Identities=20% Similarity=0.305 Sum_probs=165.5
Q ss_pred eEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChhHhhHHHHhhhhccCC----Cccc---------
Q 005041 18 RVVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNS----SLAD--------- 84 (717)
Q Consensus 18 ~iVvKiGGs~l~~~~~~~~~~~l~~l~~~Ia~l~~~G~~vviVhGGg~~~~~~~l~~~~~~~~----~~~~--------- 84 (717)
++|.||||+++.+. +.+.++++.|... ..+.++|+|+|+.+.++..++........ .+..
T Consensus 1 ~~V~KFGGtSv~~~------~~~~~v~~iI~~~-~~~~~~vvVvSA~~~iTd~L~~~~~~~~~~~~~~~~~~l~~i~~~h 73 (298)
T cd04244 1 RLVMKFGGTSVGSA------ERIRHVADLVGTY-AEGHEVVVVVSAMGGVTDRLLLAAEAAVSGRIAGVKDFIEILRLRH 73 (298)
T ss_pred CEEEEECcccCCCH------HHHHHHHHHHHHh-hcCCCEEEEEeCCCCcHHHHHHHHHHHhcCCchhHHHHHHHHHHHH
Confidence 37999999999985 3577888888765 45889999999988888876554321110 0000
Q ss_pred ------c--cCcc--------------------------c-cchHHHHHHhchHHHHHHHHHHhhcCCCCccee------
Q 005041 85 ------L--QKPQ--------------------------N-ELDGKACAAVGQSSLMALYDTLFSQLDVTSSQL------ 123 (717)
Q Consensus 85 ------l--~~~~--------------------------~-~l~~~~~~a~G~~~~~~~~~~~l~~~g~~~~~~------ 123 (717)
+ +... . ......+.+.|+.....++...|+..|+++..+
T Consensus 74 ~~~~~~l~~~~~~~~~~~~i~~~~~~l~~~~~~~~~~~~~~~~~~d~i~s~GE~lSa~lla~~L~~~Gi~a~~l~~~~~~ 153 (298)
T cd04244 74 IKAAKEAISDEEIAEVESIIDSLLEELEKLLYGIAYLGELTPRSRDYIVSFGERLSAPIFSAALRSLGIKARALDGGEAG 153 (298)
T ss_pred HHHHHHhhcchhhHHHHHHHHHHHHHHHHHHHHHHhhhcCCchHhhHhccHhHHHHHHHHHHHHHhCCCCeEEEcHHHcc
Confidence 0 0000 0 001234668888877778889999999887543
Q ss_pred EecccccCchh----HhhHHHHHHHHHHhCCCeEEecCCCeeeccCCCCCCCCCe--e--ecchHHHHHHHhhcCCCEEE
Q 005041 124 LVTDSDFRDED----FRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGI--F--WDNDSLAGLLALELKADLLV 195 (717)
Q Consensus 124 ~~~~~d~~~~~----~~~~~~~~i~~lL~~g~vPVv~g~d~v~~~~~~~~~~~~~--~--~~sD~~A~~lA~~L~Ad~li 195 (717)
+++.+++.+.. .+......+..+++.|.|||++|+- .. ...|.. + +++|++|+.+|.+|+|++|+
T Consensus 154 i~t~~~~~~a~~~~~~~~~i~~~l~~ll~~~~vpVv~Gfi--g~-----~~~g~~ttlgRggsD~~A~~~A~~l~a~~l~ 226 (298)
T cd04244 154 IITDDNFGNARPLPATYERVRKRLLPMLEDGKIPVVTGFI--GA-----TEDGAITTLGRGGSDYSATIIGAALDADEIW 226 (298)
T ss_pred eeecCcccccccchhHHHHHHHHHHHHhhcCCEEEEeCcc--cc-----CCCCCEEEecCCChHHHHHHHHHHcCCCEEE
Confidence 34555554321 2222234566788999999998722 11 113332 2 69999999999999999999
Q ss_pred EecccCccccCCCc-cccccccccccccchhHHHhcCCCCCcccCChHHHHHHHHHHHHcCCcEEEEeCCCcc
Q 005041 196 LLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMD 267 (717)
Q Consensus 196 ~lTDV~GV~~~dP~-~p~a~~i~~it~~e~~~~~~~gs~~~~~tggM~~Kv~aa~~a~~~gi~v~I~~g~~~~ 267 (717)
++|||||||+.||+ +|++++|++|+++|+.++... |+++.+.+++..+.+++||++|.|+++|+
T Consensus 227 i~tdV~Gv~~~dP~~~~~a~~i~~lsy~Ea~el~~~--------Ga~vlhp~ai~~a~~~~Ipi~i~n~~~p~ 291 (298)
T cd04244 227 IWKDVDGVMTADPRIVPEARTIPRLSYAEAMELAYF--------GAKVLHPRTVEPAMEKGIPVRVKNTFNPE 291 (298)
T ss_pred EEECCCCCCCCCCCCCCCCeEcCccCHHHHHHHHhC--------CCcccCHHHHHHHHHcCCcEEEeeCCCCC
Confidence 99999999999995 899999999999999987653 45677889999999999999999999885
No 198
>cd04259 AAK_AK-DapDC AAK_AK-DapDC: Amino Acid Kinase Superfamily (AAK), AK-DapDC; this CD includes the N-terminal catalytic aspartokinase (AK) domain of the bifunctional enzyme AK - DAP decarboxylase (DapDC) found in some bacteria. Aspartokinase is the first enzyme in the aspartate metabolic pathway, catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP. DapDC, which is the lysA gene product, catalyzes the decarboxylation of DAP to lysine.
Probab=99.87 E-value=3.2e-21 Score=202.50 Aligned_cols=229 Identities=18% Similarity=0.160 Sum_probs=164.8
Q ss_pred eEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChhHhhHHHHhhhhccCC-Ccc----c--------
Q 005041 18 RVVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNS-SLA----D-------- 84 (717)
Q Consensus 18 ~iVvKiGGs~l~~~~~~~~~~~l~~l~~~Ia~l~~~G~~vviVhGGg~~~~~~~l~~~~~~~~-~~~----~-------- 84 (717)
++|.||||+++.+.+ .+.++++.|..-.+.+.++|+|.|+...++..+++....... .+. .
T Consensus 1 ~~V~KFGGtSv~~~~------~~~~v~~ii~~~~~~~~~~vVVVSA~~gvTd~L~~~~~~a~~~~~~~~l~~i~~~~~~~ 74 (295)
T cd04259 1 WVVLKFGGTSVSSRA------RWDTIAKLAQKHLNTGGQPLIVCSALSGISNKLEALIDQALLDEHHSLFNAIQSRHLNL 74 (295)
T ss_pred CEEEEeCccccCCHH------HHHHHHHHHHHHhhcCCCEEEEEeCCCCCchHHHHHHHHHhccChHHHHHHHHHHHHHH
Confidence 369999999999853 477888877755456788999999988888876443321100 000 0
Q ss_pred ---c--cCc--------------------c--ccchHHHHHHhchHHHHHHHHHHhhcCCCCcce-----eEecccccCc
Q 005041 85 ---L--QKP--------------------Q--NELDGKACAAVGQSSLMALYDTLFSQLDVTSSQ-----LLVTDSDFRD 132 (717)
Q Consensus 85 ---l--~~~--------------------~--~~l~~~~~~a~G~~~~~~~~~~~l~~~g~~~~~-----~~~~~~d~~~ 132 (717)
+ +.. . ..-....+.+.|+.....++...|+..|+++.. ++.++.++..
T Consensus 75 ~~~L~~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~~~d~i~s~GE~lSa~lla~~L~~~Gi~a~~ld~~~~i~~~~~~~~ 154 (295)
T cd04259 75 AEQLEVDADALLANDLAQLQRWLTGISLLKQASPRTRAEVLALGELMSTRLGAAYLEAQGLKVKWLDARELLTATPTLGG 154 (295)
T ss_pred HHHhhhhhhhHHHHHHHHHHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEcHHHheeecccccc
Confidence 0 000 0 000124577899988878889999999988753 3455555432
Q ss_pred -------hhH-hhHHHHHHHHHHhC-CCeEEecCCCeeeccCCCCCCCCCe--e--ecchHHHHHHHhhcCCCEEEEecc
Q 005041 133 -------EDF-RKQLYDTVQSLLDL-RVIPIFNENDAVSTRKAPYEDSSGI--F--WDNDSLAGLLALELKADLLVLLSD 199 (717)
Q Consensus 133 -------~~~-~~~~~~~i~~lL~~-g~vPVv~g~d~v~~~~~~~~~~~~~--~--~~sD~~A~~lA~~L~Ad~li~lTD 199 (717)
... .......+.+.++. +.|||+.|+.+... .|.. + ++||++|+.+|.+|+|+.|+++||
T Consensus 155 ~~~~~~~a~v~~~~~~~~l~~~l~~~~~v~Vv~GFig~~~-------~G~~ttLGrggsD~tA~~lA~~l~A~~l~i~Td 227 (295)
T cd04259 155 ETMNYLSARCESEYADALLQKRLADGAQLIITQGFIARNA-------HGETVLLGRGGSDTSAAYFAAKLQAARCEIWTD 227 (295)
T ss_pred cccccccceehhhhhHHHHHHHHhcCCceeEeCCceeeCC-------CCCEEEECCCChHHHHHHHHHHcCCCEEEEEEC
Confidence 111 11123567766665 67999998433222 2332 3 899999999999999999999999
Q ss_pred cCccccCCCc-cccccccccccccchhHHHhcCCCCCcccCChHHHHHHHHHHHHcCCcEEEEeCCCcc
Q 005041 200 VEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMD 267 (717)
Q Consensus 200 V~GV~~~dP~-~p~a~~i~~it~~e~~~~~~~gs~~~~~tggM~~Kv~aa~~a~~~gi~v~I~~g~~~~ 267 (717)
|||||+.||+ +|++++|++|+++|+.++.. .|+++.+.+++..+.+++||++|.|++.|+
T Consensus 228 V~Gvyt~DP~~~~~a~~i~~ls~~ea~~l~~--------~Ga~v~h~~a~~~a~~~~ipi~i~~~~~p~ 288 (295)
T cd04259 228 VPGLFTANPHEVPHARLLKRLDYDEAQEIAT--------MGAKVLHPRCIPPARRANIPMVVRSTERPE 288 (295)
T ss_pred CCccccCCCCCCCCCeEeceeCHHHHHHHHH--------cCCcccCHHHHHHHHHCCCCEEEEeCCCCC
Confidence 9999999995 89999999999999998765 356788999999999999999999998885
No 199
>TIGR02078 AspKin_pair Pyrococcus aspartate kinase subunit, putative. This family consists of proteins restricted to and found as paralogous pairs (typically close together) in species of Pyrococcus, a hyperthermophilic archaeal genus. Members are always found close to other genes of threonine biosynthesis and appear to represent the Pyrococcal form of aspartate kinase. Alignment to aspartokinase III from E. coli shows that 300 N-terminal and 20 C-terminal amino acids are homologous, but the form in Pyrococcus lacks ~ 100 amino acids in between.
Probab=99.87 E-value=2.2e-21 Score=205.44 Aligned_cols=223 Identities=21% Similarity=0.251 Sum_probs=155.2
Q ss_pred eEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChhHhhHHHHhhhhccC--------CCccc----c
Q 005041 18 RVVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVN--------SSLAD----L 85 (717)
Q Consensus 18 ~iVvKiGGs~l~~~~~~~~~~~l~~l~~~Ia~l~~~G~~vviVhGGg~~~~~~~l~~~~~~~--------~~~~~----l 85 (717)
++|+||||+++.+. +.++++.|.... .+.++++|+|+...+++.+++...... ..+.+ +
T Consensus 1 m~V~KFGGsSv~~~--------~~~v~~ii~~~~-~~~~~vVVVSA~~gvTd~L~~~~~~~~~~~l~~i~~~h~~~~~~L 71 (327)
T TIGR02078 1 MIVVKFGGSSVRYA--------FEEALELVKSLS-EEKRVIVVVSALKGITDCLIRYANTFDKSAALEIEEIYEEFAKEL 71 (327)
T ss_pred CEEEEECCcchHHH--------HHHHHHHHHHHh-cCCCEEEEeCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 37999999999963 566777776544 377899999998888887655332210 00000 0
Q ss_pred cC--c-------------c--ccchHHHHHHhchHHHHHHHHHHhhcCCCCcceeEecccccCchhH----hhHHHHHHH
Q 005041 86 QK--P-------------Q--NELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDF----RKQLYDTVQ 144 (717)
Q Consensus 86 ~~--~-------------~--~~l~~~~~~a~G~~~~~~~~~~~l~~~g~~~~~~~~~~~d~~~~~~----~~~~~~~i~ 144 (717)
.. . . .......+.+.|+.....++...+....+++.+++.+++++.+... ...+.+.+.
T Consensus 72 ~~~~~~~~~~l~~~~~~~~l~~~~~~d~I~s~GE~lSa~Lla~gi~a~~vd~~~~i~t~~~~~~a~~~~~~~~~~~~~l~ 151 (327)
T TIGR02078 72 GVDLNILSPYLKELFNPPDLPKEALRDYILSLGERLSAVIFAEGINGKVVDPWDIFFAKGDFGNAFIDIKKSKRNAKILY 151 (327)
T ss_pred ccchhhhHHHHHHHHhhhccCChHHHHHHHHHHHHHHHHHHHccCCcEEEcHHHHhccCCcCCceeechhhhHhhHHHHH
Confidence 00 0 0 0012245667777655545555444444555566667666654322 123457788
Q ss_pred HHHhCCCeEEecCCCeeeccCCCCCCCCCe--e--ecchHHHHHHHhhcCCCEEEEecccCccccCCCc-cccccccccc
Q 005041 145 SLLDLRVIPIFNENDAVSTRKAPYEDSSGI--F--WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTY 219 (717)
Q Consensus 145 ~lL~~g~vPVv~g~d~v~~~~~~~~~~~~~--~--~~sD~~A~~lA~~L~Ad~li~lTDV~GV~~~dP~-~p~a~~i~~i 219 (717)
++++.|.|||++|+.. . ..|.. + ++||++|+.+|.+|+|+.++++|||||||++||+ +|++++|++|
T Consensus 152 ~~l~~g~IpVv~Gf~~--~------~~G~~ttlGRGgSD~~Aa~lA~~L~A~~v~i~TDVdGVytaDP~~v~~A~~i~~l 223 (327)
T TIGR02078 152 EVLESGKIPVIPGFYG--N------LNGYRVTLGRGGSDYSAVALGVLLNSKLVAIMSDVEGIFTADPKLVPSARLIPYL 223 (327)
T ss_pred HHHhCCcEEEEeCCcc--C------CCCeEEEcCCCChHHHHHHHHHhcCCCEEEEEECCCccCCCCCCcCCCceEcccc
Confidence 9999999999998321 1 12222 2 5899999999999999999999999999999995 9999999999
Q ss_pred cccchhHHHhcCCCCCcccCCh-HHHHHHHHHHHHcCCcEEEEeCCCc
Q 005041 220 IRAKHQAEITFGDKSRVGRGGM-TAKVNAAYCAACAGIPVVITSGFAM 266 (717)
Q Consensus 220 t~~e~~~~~~~gs~~~~~tggM-~~Kv~aa~~a~~~gi~v~I~~g~~~ 266 (717)
+++|+.++.. .|| ..|.+++..+.++|+|++|.|.+.|
T Consensus 224 sy~Ea~ela~---------~Gakvlhp~a~~~a~~~~Ipi~I~~t~~~ 262 (327)
T TIGR02078 224 SYEEIKIAAK---------LGMKALQWKAADLAKEYKIPVLFGRTRDW 262 (327)
T ss_pred CHHHHHHHHH---------CCchhhHHHHHHHHHHCCCeEEEEeCCCc
Confidence 9999986433 345 4788999999999999999998765
No 200
>cd04245 AAK_AKiii-YclM-BS AAK_AKiii-YclM-BS: Amino Acid Kinase Superfamily (AAK), AKiii-YclM-BS; this CD includes the N-terminal catalytic aspartokinase (AK) domain of the lysine plus threonine-sensitive aspartokinase isoenzyme AKIII, a monofunctional class enzyme found in Bacilli (Bacillus subtilis YclM) and Clostridia species. Aspartokinase is the first enzyme in the aspartate metabolic pathway and catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP. In Bacillus subtilis (BS), YclM is reported to be a single polypeptide of 50 kD. The Bacillus subtilis 168 AKIII is induced by lysine and repressed by threonine, and it is synergistically inhibited by lysine and threonine.
Probab=99.87 E-value=8.2e-21 Score=198.31 Aligned_cols=225 Identities=20% Similarity=0.212 Sum_probs=160.9
Q ss_pred EEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChh-------HhhHHHHhhhhccCC--Cccc----c
Q 005041 19 VVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAV-------GVGRQRLRYRKLVNS--SLAD----L 85 (717)
Q Consensus 19 iVvKiGGs~l~~~~~~~~~~~l~~l~~~Ia~l~~~G~~vviVhGGg~-------~~~~~~l~~~~~~~~--~~~~----l 85 (717)
.|.||||+++.+.+ .+.++++.|. +.+.+++||+++.. .++..++........ .+.. +
T Consensus 2 ~V~KFGGtSv~~~~------~i~~v~~ii~---~~~~~~vvVvSA~~~~~~~~~~vTd~L~~~~~~~~~~~~~~~~~~~i 72 (288)
T cd04245 2 KVVKFGGSSLASAE------QFQKVKAIVK---ADPERKIVVVSAPGKRFKDDTKVTDLLILYAEAVLAGEDTESIFEAI 72 (288)
T ss_pred EEEEECcCccCCHH------HHHHHHHHHH---hcCCCEEEEEcCCCCCCCchhhHHHHHHHHHHHHhcCcchHHHHHHH
Confidence 59999999999853 4666666665 23668999999865 477665443221100 0000 0
Q ss_pred ----------------------------cC---ccccchHHHHHHhchHHHHHHHHHHhhcCCCCccee------Eeccc
Q 005041 86 ----------------------------QK---PQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQL------LVTDS 128 (717)
Q Consensus 86 ----------------------------~~---~~~~l~~~~~~a~G~~~~~~~~~~~l~~~g~~~~~~------~~~~~ 128 (717)
.. .........+.+.|+.....++...|+..|+++..+ +++++
T Consensus 73 ~~~h~~~~~~L~~~~~~~~~i~~~~~~l~~~~~~~~~~~~d~i~s~GE~lSa~ll~~~L~~~Gi~a~~ld~~~~~i~t~~ 152 (288)
T cd04245 73 VDRYAEIADELGLPMSILEEIAEILENLANLDYANPDYLLDALKARGEYLNAQLMAAYLNYQGIDARYVIPKDAGLVVTD 152 (288)
T ss_pred HHHHHHHHHHhhhhhhHHHHHHHHHHHHHHhhccCCHHHHHHHHHHhHHHHHHHHHHHHHHCCCCeEEEcHHHCceeecC
Confidence 00 000012246778998877778889999999887533 34566
Q ss_pred ccCchhHhhHHHHHHHHHHhCCCeEEecCCCeeeccCCCCCCCCCe--e--ecchHHHHHHHhhcCCCEEEEecccCccc
Q 005041 129 DFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGI--F--WDNDSLAGLLALELKADLLVLLSDVEGLY 204 (717)
Q Consensus 129 d~~~~~~~~~~~~~i~~lL~~g~vPVv~g~d~v~~~~~~~~~~~~~--~--~~sD~~A~~lA~~L~Ad~li~lTDV~GV~ 204 (717)
++.+........+.+.+.++.+.|||+.|+-+... .|.. + ++||+.|+.+|.+|+|+.+.++|||||||
T Consensus 153 ~~~~a~~~~~~~~~~~~~~~~~~v~Vv~Gf~g~~~-------~G~~ttLgRggSD~tAal~A~~l~A~~v~i~tdVdGvy 225 (288)
T cd04245 153 EPGNAQILPESYQKIKKLRDSDEKLVIPGFYGYSK-------NGDIKTFSRGGSDITGAILARGFQADLYENFTDVDGIY 225 (288)
T ss_pred CccccccchhhHHHHHHHHhCCCEEEEeCccccCC-------CCCEEEcCCCchHHHHHHHHHHcCCCEEEEEeCCCceE
Confidence 66554333334577888889899999998432221 2322 2 79999999999999999999999999999
Q ss_pred cCCCc-cccccccccccccchhHHHhcCCCCCcccCChHHHHHHHHHHHHcCCcEEEEeCCCcc
Q 005041 205 SGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMD 267 (717)
Q Consensus 205 ~~dP~-~p~a~~i~~it~~e~~~~~~~gs~~~~~tggM~~Kv~aa~~a~~~gi~v~I~~g~~~~ 267 (717)
++||+ +|+++.+++||++|+.++..+| ..-|.| ++...+.+++||++|.|.++|+
T Consensus 226 taDPr~v~~A~~i~~lsy~EA~ela~~G------akVlhp--~ai~~a~~~~Ipi~v~n~~~p~ 281 (288)
T cd04245 226 AANPRIVANPKPISEMTYREMRELSYAG------FSVFHD--EALIPAIEAGIPINIKNTNHPE 281 (288)
T ss_pred CCCCCCCCCCeEeCccCHHHHHHHHHCC------CcccCH--HHHHHHHHCCCcEEEeeCCCCC
Confidence 99995 8999999999999999876655 344555 5888899999999999988875
No 201
>cd04257 AAK_AK-HSDH AAK_AK-HSDH: Amino Acid Kinase Superfamily (AAK), AK-HSDH; this CD includes the N-terminal catalytic domain of aspartokinase (AK) of the bifunctional enzyme AK - homoserine dehydrogenase (HSDH). These aspartokinases are found in bacteria (E. coli AKI-HSDHI, ThrA and E. coli AKII-HSDHII, MetL) and higher plants (Z. mays AK-HSDH). AK and HSDH are the first and third enzymes in the biosynthetic pathway of the aspartate family of amino acids. AK catalyzes the phosphorylation of Asp to P-aspartyl phosphate. HSDH catalyzes the NADPH-dependent conversion of Asp 3-semialdehyde to homoserine. ThrA and MetL are involved in threonine and methionine biosynthesis, respectively. In E. coli, ThrA is subject to allosteric regulation by the end product L-threonine and the native enzyme is reported to be tetrameric. As with bacteria, plant AK and HSDH are feedback inhibited by pathway end products. Maize AK-HSDH is a Thr-sensitive 180-kD enzyme. Arabidopsis AK-HSDH is an alanine-act
Probab=99.87 E-value=5.5e-21 Score=200.85 Aligned_cols=227 Identities=19% Similarity=0.253 Sum_probs=162.4
Q ss_pred EEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChhHhhHHHHhhhhccCCC---cc-----------c
Q 005041 19 VVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSS---LA-----------D 84 (717)
Q Consensus 19 iVvKiGGs~l~~~~~~~~~~~l~~l~~~Ia~l~~~G~~vviVhGGg~~~~~~~l~~~~~~~~~---~~-----------~ 84 (717)
.|.||||+++.+.+ .+.++++.|.... ++.++|+|.++.+.++..+++........ +. +
T Consensus 2 ~V~KFGGtSv~~~~------~i~~v~~iI~~~~-~~~~~vvVvSA~~gvTd~L~~~~~~~~~~~~~~~~~l~~i~~~h~~ 74 (294)
T cd04257 2 KVLKFGGTSLANAE------RIRRVADIILNAA-KQEQVAVVVSAPGKVTDLLLELAELASSGDDAYEDILQELESKHLD 74 (294)
T ss_pred EEEEeCccccCCHH------HHHHHHHHHHhhc-cCCCEEEEEcCCCCcHHHHHHHHHHHhcCChhHHHHHHHHHHHHHH
Confidence 69999999999853 4777777777554 46789999999888888765543311100 00 0
Q ss_pred ----c-cCc--------------c--------------ccchHHHHHHhchHHHHHHHHHHhhcCCCCcc-----eeEec
Q 005041 85 ----L-QKP--------------Q--------------NELDGKACAAVGQSSLMALYDTLFSQLDVTSS-----QLLVT 126 (717)
Q Consensus 85 ----l-~~~--------------~--------------~~l~~~~~~a~G~~~~~~~~~~~l~~~g~~~~-----~~~~~ 126 (717)
+ ... + .......+.+.|+.....++...|+..|+++. +++++
T Consensus 75 ~~~~l~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~~~d~ils~GE~lSa~lla~~L~~~Gi~a~~ld~~~~i~t 154 (294)
T cd04257 75 LITELLSGDAAAELLSALGNDLEELKDLLEGIYLLGELPDSIRAKVLSFGERLSARLLSALLNQQGLDAAWIDARELIVT 154 (294)
T ss_pred HHHHhhcchhhHHHHHHHHHHHHHHHHHHHHHHhhccCChhHhhhheeHHHHHHHHHHHHHHHhCCCCeEEEchHHeeEe
Confidence 0 000 0 00112356688888877888899999998765 34566
Q ss_pred ccccCchhHhh-HHHHHHHHHHhC-CCeEEecCCCeeeccCCCCCCCCCe--e--ecchHHHHHHHhhcCCCEEEEeccc
Q 005041 127 DSDFRDEDFRK-QLYDTVQSLLDL-RVIPIFNENDAVSTRKAPYEDSSGI--F--WDNDSLAGLLALELKADLLVLLSDV 200 (717)
Q Consensus 127 ~~d~~~~~~~~-~~~~~i~~lL~~-g~vPVv~g~d~v~~~~~~~~~~~~~--~--~~sD~~A~~lA~~L~Ad~li~lTDV 200 (717)
++++.+..... .....+++++.. +.|||+.|+-+... .|.. + ++||++|+.+|.+|+|+.++++|||
T Consensus 155 ~~~~~~a~~~~~~~~~~l~~~~~~~~~v~Vv~Gfig~~~-------~G~~ttlGRGGSD~~A~~lA~~l~a~~l~i~tdV 227 (294)
T cd04257 155 DGGYLNAVVDIELSKERIKAWFSSNGKVIVVTGFIASNP-------QGETTTLGRNGSDYSAAILAALLDADQVEIWTDV 227 (294)
T ss_pred cCCCCceEechHhhHHHHHHHHhcCCCEEEecCcccCCC-------CCCEEECCCCchHHHHHHHHHHhCCCEEEEEeCC
Confidence 66665443321 224667777776 89999998432111 2322 2 8899999999999999999999999
Q ss_pred CccccCCCc-cccccccccccccchhHHHhcCCCCCcccCChHHHHHHHHHHHHcCCcEEEEeCCCcc
Q 005041 201 EGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMD 267 (717)
Q Consensus 201 ~GV~~~dP~-~p~a~~i~~it~~e~~~~~~~gs~~~~~tggM~~Kv~aa~~a~~~gi~v~I~~g~~~~ 267 (717)
||||+.||+ +|++++|++|+++|+.++...|+ .-+ ..++...+.+++||++|.|+++|+
T Consensus 228 dGvyt~DP~~~~~A~~i~~is~~ea~~l~~~Ga------kv~--h~~~~~~a~~~~Ipi~i~~~~~p~ 287 (294)
T cd04257 228 DGVYSADPRKVKDARLLPSLSYQEAMELSYFGA------KVL--HPKTIQPVAKKNIPILIKNTFNPE 287 (294)
T ss_pred CccCCCCCCCCCCCeEeceeCHHHHHHHHhCCC------ccc--CHHHHHHHHHCCCCEEEeeCCCCC
Confidence 999999995 89999999999999998765543 323 346777899999999999999885
No 202
>PRK06291 aspartate kinase; Provisional
Probab=99.86 E-value=8.8e-21 Score=212.93 Aligned_cols=238 Identities=22% Similarity=0.316 Sum_probs=175.3
Q ss_pred eEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChhHhhHHHHhhhhccCC-----Cccc--------
Q 005041 18 RVVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNS-----SLAD-------- 84 (717)
Q Consensus 18 ~iVvKiGGs~l~~~~~~~~~~~l~~l~~~Ia~l~~~G~~vviVhGGg~~~~~~~l~~~~~~~~-----~~~~-------- 84 (717)
++|.||||+++.+. +.+.++++.|......|.++|+|.++.+.++..++...+.... .+..
T Consensus 2 ~~V~KFGGtSv~~~------~~~~~v~~ii~~~~~~~~~~vvVvSA~~~~Td~L~~~~~~~~~~~~~~~~~~~~~~i~~~ 75 (465)
T PRK06291 2 RLVMKFGGTSVGDG------ERIRHVAKLVKRYRSEGNEVVVVVSAMTGVTDALLEIAEQALDVRDIAKVKDFIADLRER 75 (465)
T ss_pred cEEEEeCcccCCCH------HHHHHHHHHHHHHHhcCCCEEEEEcCCCCCHHHHHHHHHHHHhccchhhHHHHHHHHHHH
Confidence 37999999999985 3578888888876667889999999988888877554322100 0000
Q ss_pred -------c-cCcc-----------------------------ccchHHHHHHhchHHHHHHHHHHhhcCCCCccee----
Q 005041 85 -------L-QKPQ-----------------------------NELDGKACAAVGQSSLMALYDTLFSQLDVTSSQL---- 123 (717)
Q Consensus 85 -------l-~~~~-----------------------------~~l~~~~~~a~G~~~~~~~~~~~l~~~g~~~~~~---- 123 (717)
+ ...+ ..-....+.+.|+.....++...|+..|+++..+
T Consensus 76 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~i~s~GE~~Sa~l~~~~L~~~Gi~a~~l~~~~ 155 (465)
T PRK06291 76 HYKAIEEAIKDPDIREEVSKTIDSRIEELEKALVGVSYLGELTPRSRDYILSFGERLSAPILSGALRDLGIKSVALTGGE 155 (465)
T ss_pred HHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHHHHHhccCChHHHHHHHhhhHHHHHHHHHHHHHhCCCCeEEEchHH
Confidence 0 0000 0001235778898877778889999999887543
Q ss_pred --EecccccCchhH----hhHHHHHHHHHHhCCCeEEecCCCeeeccCCCCCCCCCe--e--ecchHHHHHHHhhcCCCE
Q 005041 124 --LVTDSDFRDEDF----RKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGI--F--WDNDSLAGLLALELKADL 193 (717)
Q Consensus 124 --~~~~~d~~~~~~----~~~~~~~i~~lL~~g~vPVv~g~d~v~~~~~~~~~~~~~--~--~~sD~~A~~lA~~L~Ad~ 193 (717)
+++.+++.+... +....+.+..+++.|.|||++|+-+.. ..|.. + +++|++|+.+|.+|+|+.
T Consensus 156 ~~i~t~~~~~~~~~~~~~~~~~~~~~~~ll~~~~vpVv~Gfig~~-------~~g~~~tlgrggsD~~A~~~A~~l~a~~ 228 (465)
T PRK06291 156 AGIITDSNFGNARPLPKTYERVKERLEPLLKEGVIPVVTGFIGET-------EEGIITTLGRGGSDYSAAIIGAALDADE 228 (465)
T ss_pred CcEEecCCCCceeechhhHHHHHHHHHHHhhcCcEEEEeCcEEcC-------CCCCEEEecCCChHHHHHHHHHhcCCCE
Confidence 345555544322 233346788899999999998732211 12322 2 699999999999999999
Q ss_pred EEEecccCccccCCCc-cccccccccccccchhHHHhcCCCCCcccCChHHHHHHHHHHHHcCCcEEEEeCCCcchHHHH
Q 005041 194 LVLLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKV 272 (717)
Q Consensus 194 li~lTDV~GV~~~dP~-~p~a~~i~~it~~e~~~~~~~gs~~~~~tggM~~Kv~aa~~a~~~gi~v~I~~g~~~~~l~~~ 272 (717)
|+++|||||||+.||+ +|++++|++|+++|+.++.. .|.+..|.+++..+.+++||++|.|++.|+
T Consensus 229 ~~i~tdV~Gi~~~dP~~~~~a~~i~~l~~~ea~~l~~--------~G~~v~~~~a~~~~~~~~i~i~i~~~~~~~----- 295 (465)
T PRK06291 229 IWIWTDVDGVMTTDPRIVPEARVIPKISYIEAMELSY--------FGAKVLHPRTIEPAMEKGIPVRVKNTFNPE----- 295 (465)
T ss_pred EEEEECCCCCCCCCCCCCCCCeEccccCHHHHHHHHh--------CCCcccCHHHHHHHHHcCCcEEEecCCCCC-----
Confidence 9999999999999995 89999999999999988654 356788999999999999999999999884
Q ss_pred hcCCcceEEEecC
Q 005041 273 LEGKRVGTLFHRD 285 (717)
Q Consensus 273 ~tg~~iGT~i~a~ 285 (717)
..||++...
T Consensus 296 ----~~gt~i~~~ 304 (465)
T PRK06291 296 ----FPGTLITSD 304 (465)
T ss_pred ----CCceEEEec
Confidence 468888654
No 203
>cd04243 AAK_AK-HSDH-like AAK_AK-HSDH-like: Amino Acid Kinase Superfamily (AAK), AK-HSDH-like; this family includes the N-terminal catalytic domain of aspartokinase (AK) of the bifunctional enzyme AK- homoserine dehydrogenase (HSDH). These aspartokinases are found in such bacteria as E. coli (AKI-HSDHI, ThrA and AKII-HSDHII, MetL) and in higher plants (Z. mays AK-HSDH). AK and HSDH are the first and third enzymes in the biosynthetic pathway of the aspartate family of amino acids. AK catalyzes the phosphorylation of Asp to P-aspartyl phosphate. HSDH catalyzes the NADPH-dependent conversion of Asp 3-semialdehyde to homoserine. ThrA and MetL are involved in threonine and methionine biosynthesis, respectively. In E. coli, ThrA is subject to allosteric regulation by the end product L-threonine and the native enzyme is reported to be tetrameric. As with bacteria, plant AK and HSDH are feedback inhibited by pathway end products. Maize AK-HSDH is a Thr-sensitive 180-kD enzyme. Arabidopsis AK-
Probab=99.86 E-value=1.4e-20 Score=197.65 Aligned_cols=227 Identities=19% Similarity=0.253 Sum_probs=161.1
Q ss_pred eEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChhHhhHHHHhhhhccCCC---c----cc------
Q 005041 18 RVVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSS---L----AD------ 84 (717)
Q Consensus 18 ~iVvKiGGs~l~~~~~~~~~~~l~~l~~~Ia~l~~~G~~vviVhGGg~~~~~~~l~~~~~~~~~---~----~~------ 84 (717)
+.|.||||+++.+. +.+.++++.|..-. +.++++|+++...++..++......... . ..
T Consensus 1 m~V~KFGGtSv~~~------~~i~~v~~iI~~~~--~~~~vvVvSA~~gvTd~L~~~~~~a~~~~~~~~~~l~~i~~~h~ 72 (293)
T cd04243 1 MKVLKFGGTSVASA------ERIRRVADIIKSRA--SSPVLVVVSALGGVTNRLVALAELAASGDDAQAIVLQEIRERHL 72 (293)
T ss_pred CEEEEECccccCCH------HHHHHHHHHHHHhc--CCCEEEEEcCCCCcHHHHHHHHHHHhcCChhHHHHHHHHHHHHH
Confidence 36999999999985 34677776666432 7799999999888888765543211100 0 00
Q ss_pred -----c--cCc-------------cc--------------cchHHHHHHhchHHHHHHHHHHhhcCCCCcce-----eEe
Q 005041 85 -----L--QKP-------------QN--------------ELDGKACAAVGQSSLMALYDTLFSQLDVTSSQ-----LLV 125 (717)
Q Consensus 85 -----l--~~~-------------~~--------------~l~~~~~~a~G~~~~~~~~~~~l~~~g~~~~~-----~~~ 125 (717)
+ ... ++ ......+.+.|+.....++...|...|+++.. ++.
T Consensus 73 ~~~~~L~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~~s~~~~d~ils~GE~lSa~lla~~L~~~Gi~a~~ld~~~~i~ 152 (293)
T cd04243 73 DLIKELLSGESAAELLAALDSLLERLKDLLEGIRLLGELSDKTRAEVLSFGELLSSRLMSAYLQEQGLPAAWLDARELLL 152 (293)
T ss_pred HHHHHhhcchhhHHHHHHHHHHHHHHHHHHHhhhhhccCCchhhhHheeHHHHHHHHHHHHHHHhCCCCcEEEcHHHeEE
Confidence 0 000 00 01123566888888778888999999987653 345
Q ss_pred cccccCchhHhh-HHHHHHHHHHhC-CCeEEecCCCeeeccCCCCCCCCCe--e--ecchHHHHHHHhhcCCCEEEEecc
Q 005041 126 TDSDFRDEDFRK-QLYDTVQSLLDL-RVIPIFNENDAVSTRKAPYEDSSGI--F--WDNDSLAGLLALELKADLLVLLSD 199 (717)
Q Consensus 126 ~~~d~~~~~~~~-~~~~~i~~lL~~-g~vPVv~g~d~v~~~~~~~~~~~~~--~--~~sD~~A~~lA~~L~Ad~li~lTD 199 (717)
+++++.+..... ...+.++.+++. +.|||+.|+-+... .|.. + ++||++|+.+|.+|+|++|+++||
T Consensus 153 t~~~~~~~~~~~~~s~~~~~~~~~~~~~v~Vv~Gfig~~~-------~G~~ttLGRggsD~~A~~~a~~l~a~~~~i~td 225 (293)
T cd04243 153 TDDGFLNAVVDLKLSKERLAQLLAEHGKVVVTQGFIASNE-------DGETTTLGRGGSDYSAALLAALLDAEEVEIWTD 225 (293)
T ss_pred ecCCCCcchhhhHHHHHHHHHHHhcCCCEEEecCccccCC-------CCCEEEeCCCCcHHHHHHHHHHcCCCEEEEEeC
Confidence 555555433211 114578888887 89999998432111 2332 3 788999999999999999999999
Q ss_pred cCccccCCCc-cccccccccccccchhHHHhcCCCCCcccCChHHHHHHHHHHHHcCCcEEEEeCCCcc
Q 005041 200 VEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMD 267 (717)
Q Consensus 200 V~GV~~~dP~-~p~a~~i~~it~~e~~~~~~~gs~~~~~tggM~~Kv~aa~~a~~~gi~v~I~~g~~~~ 267 (717)
|||||++||+ +|++++|++|+++|+.++...|+ .-| ..++...+.+++||++|.|++.|+
T Consensus 226 vdGiyt~dP~~~~~a~~i~~ls~~ea~~l~~~Ga------kvl--~p~ai~~a~~~~i~i~i~~~~~p~ 286 (293)
T cd04243 226 VDGVYTADPRKVPDARLLKELSYDEAMELAYFGA------KVL--HPRTIQPAIRKNIPIFIKNTFNPE 286 (293)
T ss_pred CCccCCCCCCCCCCCeEeceeCHHHHHHHHhCCC------ccc--CHHHHHHHHHCCCcEEEecCCCCC
Confidence 9999999995 89999999999999998776553 223 446788899999999999999885
No 204
>PRK09084 aspartate kinase III; Validated
Probab=99.85 E-value=1.7e-20 Score=209.01 Aligned_cols=234 Identities=20% Similarity=0.210 Sum_probs=170.5
Q ss_pred eEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChhHhhHHHHhhhhccCCC--ccc-----------
Q 005041 18 RVVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSS--LAD----------- 84 (717)
Q Consensus 18 ~iVvKiGGs~l~~~~~~~~~~~l~~l~~~Ia~l~~~G~~vviVhGGg~~~~~~~l~~~~~~~~~--~~~----------- 84 (717)
|+|.||||+++.+. +.+.++++.|+. .+.++|+|+++.+.++..+++..+..... +..
T Consensus 1 m~V~KFGGtSv~~~------e~i~~v~~ii~~---~~~~~vvVVSA~~~~Td~L~~~~~~~~~~~~~~~~~~~i~~~h~~ 71 (448)
T PRK09084 1 LVVAKFGGTSVADF------DAMNRSADIVLS---NPNTRLVVLSASAGVTNLLVALAEGAEPGDERLALLDEIRQIQYA 71 (448)
T ss_pred CEEEEECccCcCCH------HHHHHHHHHHhc---CCCCEEEEEcCCCCchHHHHHHHHHHHcCccHHHHHHHHHHHHHH
Confidence 47999999999985 356777777764 57899999999988898775544322110 000
Q ss_pred ----ccCc-----------------------c-ccchHHHHHHhchHHHHHHHHHHhhcCCCCc-----ceeEecccccC
Q 005041 85 ----LQKP-----------------------Q-NELDGKACAAVGQSSLMALYDTLFSQLDVTS-----SQLLVTDSDFR 131 (717)
Q Consensus 85 ----l~~~-----------------------~-~~l~~~~~~a~G~~~~~~~~~~~l~~~g~~~-----~~~~~~~~d~~ 131 (717)
+... + .......+.+.|+.....++...|...|+++ .++++++++|.
T Consensus 72 ~~~~l~~~~~~~~~i~~~~~~l~~l~~~~~~~~~~~~~d~i~s~GE~lSa~l~~~~L~~~Gi~a~~l~~~~~i~t~~~~~ 151 (448)
T PRK09084 72 ILDRLGDPNVVREEIERLLENITVLAEAASLATSPALTDELVSHGELMSTLLFVELLRERGVQAEWFDVRKVMRTDDRFG 151 (448)
T ss_pred HHHHhccchHHHHHHHHHHHHHHHHHHhhhhcCChhhhhhhhhHHHHHHHHHHHHHHHhCCCCcEEEchHHeEEecCCCC
Confidence 0000 0 0012346778999888888899999999885 45677777776
Q ss_pred chhHh-----hHHHHHHHHHHhCCCeEEecCCCeeeccCCCCCCCCC-e-e--ecchHHHHHHHhhcCCCEEEEecccCc
Q 005041 132 DEDFR-----KQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSG-I-F--WDNDSLAGLLALELKADLLVLLSDVEG 202 (717)
Q Consensus 132 ~~~~~-----~~~~~~i~~lL~~g~vPVv~g~d~v~~~~~~~~~~~~-~-~--~~sD~~A~~lA~~L~Ad~li~lTDV~G 202 (717)
+.... ....+.+..+++.+ |||+.|+-+... .|. + + ++||+.|+.+|.+|+|+.++++|||||
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~-v~Vv~Gf~g~~~-------~G~~ttLgRggSD~~a~~~a~~l~a~~~~i~tdv~G 223 (448)
T PRK09084 152 RAEPDVAALAELAQEQLLPLLAEG-VVVTQGFIGSDE-------KGRTTTLGRGGSDYSAALLAEALNASRVEIWTDVPG 223 (448)
T ss_pred cccccHHHHHHHHHHHHHHhhcCC-cEEecCeeecCC-------CCCEeecCCCchHHHHHHHHHHcCCCEEEEEECCCc
Confidence 54331 12235677778888 999998443322 222 2 3 799999999999999999999999999
Q ss_pred cccCCCc-cccccccccccccchhHHHhcCCCCCcccCChHHHHHHHHHHHHcCCcEEEEeCCCcchHHHHhcCCcceEE
Q 005041 203 LYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTL 281 (717)
Q Consensus 203 V~~~dP~-~p~a~~i~~it~~e~~~~~~~gs~~~~~tggM~~Kv~aa~~a~~~gi~v~I~~g~~~~~l~~~~tg~~iGT~ 281 (717)
||+.||+ +|++++|++|+++|+.++...|.+ +.+.++...+.+.++|++|.|.++|+ ..||+
T Consensus 224 i~t~dP~~~~~a~~i~~is~~ea~ela~~Ga~--------vlh~~~~~~~~~~~i~i~i~~~~~~~---------~~GT~ 286 (448)
T PRK09084 224 IYTTDPRIVPAAKRIDEISFEEAAEMATFGAK--------VLHPATLLPAVRSNIPVFVGSSKDPE---------AGGTW 286 (448)
T ss_pred cccCCCCCCCCCeEcccCCHHHHHHHHhCCCc--------ccCHHHHHHHHHcCCcEEEEeCCCCC---------CCceE
Confidence 9999995 999999999999999987665532 23446778899999999999998874 46888
Q ss_pred EecC
Q 005041 282 FHRD 285 (717)
Q Consensus 282 i~a~ 285 (717)
+...
T Consensus 287 I~~~ 290 (448)
T PRK09084 287 ICND 290 (448)
T ss_pred EecC
Confidence 8654
No 205
>PRK05925 aspartate kinase; Provisional
Probab=99.84 E-value=6.5e-20 Score=202.67 Aligned_cols=235 Identities=20% Similarity=0.204 Sum_probs=164.4
Q ss_pred CeEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChhHhhHHHHhhhhccCCC-----------ccc-
Q 005041 17 KRVVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSS-----------LAD- 84 (717)
Q Consensus 17 ~~iVvKiGGs~l~~~~~~~~~~~l~~l~~~Ia~l~~~G~~vviVhGGg~~~~~~~l~~~~~~~~~-----------~~~- 84 (717)
.++|.||||+++.+. +.+.++++.|.. ..++++|+++.+.++..+....+..... +.+
T Consensus 2 ~~~V~KFGGtSv~~~------e~i~~v~~ii~~----~~~~vVVvSA~~~~Td~L~~~~~~a~~~~~~~~~~i~~~~~~~ 71 (440)
T PRK05925 2 APLVYKFGGTSLGTA------ESIRRVCDIICK----EKPSFVVVSAVAGVTDLLEEFCRLSKGKREALTEKIREKHEEI 71 (440)
T ss_pred CcEEEEECccccCCH------HHHHHHHHHHhc----CCCEEEEECCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHHH
Confidence 568999999999985 346666666653 3578999999888888765433210000 000
Q ss_pred ---ccC-----------------cc-ccchHHHHHHhchHHHHHHHHHHhhcCCCCcc-----eeEecccccCchhH--h
Q 005041 85 ---LQK-----------------PQ-NELDGKACAAVGQSSLMALYDTLFSQLDVTSS-----QLLVTDSDFRDEDF--R 136 (717)
Q Consensus 85 ---l~~-----------------~~-~~l~~~~~~a~G~~~~~~~~~~~l~~~g~~~~-----~~~~~~~d~~~~~~--~ 136 (717)
+.. .. .......+.+.|+.....++...|+..|+++. ++++++++|.+... .
T Consensus 72 ~~~l~~~~~~~~~~~~L~~~~~~~~~~~~~~d~i~s~GE~~Sa~l~a~~L~~~Gi~a~~ld~~~~i~t~~~~~~a~~~~~ 151 (440)
T PRK05925 72 AKELGIEFSLSPWWERLEHFEDVEEISSEDQARILAIGEDISASLICAYCCTYVLPLEFLEARQVILTDDQYLRAVPDLA 151 (440)
T ss_pred HHHhhcchhhhHHHHHHHHHHHhCcCCchhhhhheehhHHHHHHHHHHHHHhCCCCeEEEcHHHhEeecCCccccccCHH
Confidence 000 00 01122466788998888888899999998654 45677766665333 1
Q ss_pred hHHHHHHHHHHhCCCeEEecCCCeeeccCCCCCCCCCe--e--ecchHHHHHHHhhcCCCEEEEecccCccccCCCc-cc
Q 005041 137 KQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGI--F--WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EP 211 (717)
Q Consensus 137 ~~~~~~i~~lL~~g~vPVv~g~d~v~~~~~~~~~~~~~--~--~~sD~~A~~lA~~L~Ad~li~lTDV~GV~~~dP~-~p 211 (717)
..........++.+.|||+.|+-+... .|.. + ++||++|+.+|.+|+||.++++|||||||+.||+ +|
T Consensus 152 ~~~~~~~~~~~~~~~v~Vv~GF~g~~~-------~G~~ttLgrGgsD~~AallA~~l~Ad~~~i~TdVdGvytaDP~~~~ 224 (440)
T PRK05925 152 LMQTAWHELALQEDAIYIMQGFIGANS-------SGKTTVLGRGGSDFSASLIAELCKAREVRIYTDVNGIYTMDPKIIK 224 (440)
T ss_pred HHHHHHHHhhccCCcEEEecCcceeCC-------CCCEEEeccCcHHHHHHHHHHHcCCCEEEEEEcCCccCCCCcCCCC
Confidence 111222333456778999998443222 2322 3 9999999999999999999999999999999995 89
Q ss_pred cccccccccccchhHHHhcCCCCCcccCChHHHHHHHHHHHHcCCcEEEEeCCCcchHHHHhcCCcceEEEecC
Q 005041 212 NSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRD 285 (717)
Q Consensus 212 ~a~~i~~it~~e~~~~~~~gs~~~~~tggM~~Kv~aa~~a~~~gi~v~I~~g~~~~~l~~~~tg~~iGT~i~a~ 285 (717)
++++|++|+++|+.++...|++ ..+++| ...+.++|+|++|.|+++|+ ..||++...
T Consensus 225 ~A~~i~~is~~ea~ela~~Ga~--vl~~~~------~~~a~~~~Ipi~I~~~~~p~---------~~GT~i~~~ 281 (440)
T PRK05925 225 DAQLIPELSFEEMQNLASFGAK--VLHPPM------LKPCVRAGIPIFVTSTFDVT---------KGGTWIYAS 281 (440)
T ss_pred CCeEeeEECHHHHHHHHhCCCC--cCCHHH------HHHHHHCCCcEEEecCCCCC---------CCccEEecC
Confidence 9999999999999887655543 455554 46789999999999999886 368888654
No 206
>cd04258 AAK_AKiii-LysC-EC AAK_AKiii-LysC-EC: Amino Acid Kinase Superfamily (AAK), AKiii-LysC-EC: this CD includes the N-terminal catalytic aspartokinase (AK) domain of the lysine-sensitive aspartokinase isoenzyme AKIII. AKIII is a monofunctional class enzyme (LysC) found in some bacteria such as E. coli. Aspartokinase is the first enzyme in the aspartate metabolic pathway and catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP. In E. coli, LysC is reported to be a homodimer of 50 kD subunits.
Probab=99.84 E-value=1.2e-19 Score=189.89 Aligned_cols=225 Identities=20% Similarity=0.200 Sum_probs=157.6
Q ss_pred eEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChhHhhHHHHhhhhccCC----Ccc----ccc---
Q 005041 18 RVVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNS----SLA----DLQ--- 86 (717)
Q Consensus 18 ~iVvKiGGs~l~~~~~~~~~~~l~~l~~~Ia~l~~~G~~vviVhGGg~~~~~~~l~~~~~~~~----~~~----~l~--- 86 (717)
+.|+||||+++.+.+ .+.++++.|.. .+.++|+|.++.+.++..+++....... .+. .+.
T Consensus 1 m~V~KFGGtSv~~~~------~i~~v~~ii~~---~~~~~vVVVSA~~~vTd~L~~~~~~~~~~~~~~~~~~l~~l~~~h 71 (292)
T cd04258 1 MVVAKFGGTSVADYA------AMLRCAAIVKS---DASVRLVVVSASAGVTNLLVALADAAESGEEIESIPQLHEIRAIH 71 (292)
T ss_pred CEEEEECccccCCHH------HHHHHHHHHhc---cCCCEEEEEeCCCCchHHHHHHHHHHhcCCcchhhHHHHHHHHHH
Confidence 379999999999853 45666666653 3678999999988888876554322110 000 000
Q ss_pred ---------Ccc------------------c-------cchHHHHHHhchHHHHHHHHHHhhcCCCCcc-----eeEecc
Q 005041 87 ---------KPQ------------------N-------ELDGKACAAVGQSSLMALYDTLFSQLDVTSS-----QLLVTD 127 (717)
Q Consensus 87 ---------~~~------------------~-------~l~~~~~~a~G~~~~~~~~~~~l~~~g~~~~-----~~~~~~ 127 (717)
... + .-....+.+.|+.....++...|+..|+++. ++++++
T Consensus 72 ~~~~~~L~~~~~~~~~i~~~~~~l~~~~~~~~~~~~~~~~~~d~i~s~GE~lSa~lla~~L~~~Gi~a~~ld~~~~i~t~ 151 (292)
T cd04258 72 FAILNRLGAPEELRAKLEELLEELTQLAEGAALLGELSPASRDELLSFGERMSSLLFSEALREQGVPAEWFDVRTVLRTD 151 (292)
T ss_pred HHHHHHhhcchhHHHHHHHHHHHHHHHHhhhccccccChHhHhHhhhHHHHHHHHHHHHHHHhCCCCeEEEchHHeEEec
Confidence 000 0 0012467788888777788899999998765 445666
Q ss_pred cccCchhHhh-----HHHHHHHHHHhCCCeEEecCCCeeeccCCCCCCCCCe--e--ecchHHHHHHHhhcCCCEEEEec
Q 005041 128 SDFRDEDFRK-----QLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGI--F--WDNDSLAGLLALELKADLLVLLS 198 (717)
Q Consensus 128 ~d~~~~~~~~-----~~~~~i~~lL~~g~vPVv~g~d~v~~~~~~~~~~~~~--~--~~sD~~A~~lA~~L~Ad~li~lT 198 (717)
+++.+..... .....++. +..+.|||+.|+-+... .|.. + ++||+.|+.+|.+|+|+.++++|
T Consensus 152 ~~~~~a~~~~~~~~~~~~~~~~~-~~~~~v~Vv~Gf~g~~~-------~G~~ttLGrggsD~~a~~~a~~l~a~~~~i~t 223 (292)
T cd04258 152 SRFGRAAPDLNALAELAAKLLKP-LLAGTVVVTQGFIGSTE-------KGRTTTLGRGGSDYSAALLAEALHAEELQIWT 223 (292)
T ss_pred CCCccccccHHHHHHHHHHHHHH-hhcCCEEEECCccccCC-------CCCEEecCCCchHHHHHHHHHHcCCCEEEEEE
Confidence 6666544211 11222333 45668999998432221 2222 2 89999999999999999999999
Q ss_pred ccCccccCCCc-cccccccccccccchhHHHhcCCCCCcccCChHHHHHHHHHHHHcCCcEEEEeCCCcc
Q 005041 199 DVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMD 267 (717)
Q Consensus 199 DV~GV~~~dP~-~p~a~~i~~it~~e~~~~~~~gs~~~~~tggM~~Kv~aa~~a~~~gi~v~I~~g~~~~ 267 (717)
||||||+.||+ +|+++++++|+++|+.++...|+ .-| +.++...+.+.+||++|.|.++|+
T Consensus 224 dv~Gv~~~dP~~~~~a~~i~~isy~Ea~ela~~Ga------kvl--hp~a~~~~~~~~ipi~i~~~~~p~ 285 (292)
T cd04258 224 DVAGIYTTDPRICPAARAIKEISFAEAAEMATFGA------KVL--HPATLLPAIRKNIPVFVGSSKDPE 285 (292)
T ss_pred CCCccCCCCCCCCCCCeEeceeCHHHHHHHHHCCC------ccc--CHHHHHHHHHcCCcEEEEeCCCCC
Confidence 99999999995 99999999999999998776553 333 456888899999999999988874
No 207
>PRK09034 aspartate kinase; Reviewed
Probab=99.82 E-value=2.8e-19 Score=199.90 Aligned_cols=235 Identities=21% Similarity=0.226 Sum_probs=166.4
Q ss_pred eEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChhH-------hhHHHHhhhhccCCC--ccc----
Q 005041 18 RVVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVG-------VGRQRLRYRKLVNSS--LAD---- 84 (717)
Q Consensus 18 ~iVvKiGGs~l~~~~~~~~~~~l~~l~~~Ia~l~~~G~~vviVhGGg~~-------~~~~~l~~~~~~~~~--~~~---- 84 (717)
|.|.||||+++.+.+ .+.++++.|. +.+.++|+|+++.+. ++..+++..+..... +..
T Consensus 1 m~V~KFGGtSv~~~~------~i~~v~~ii~---~~~~~~vvVVSA~~~~~~~~~~~Td~L~~~~~~~~~~~~~~~~~~~ 71 (454)
T PRK09034 1 MKVVKFGGSSLASAE------QFKKVLNIVK---SDPERKIVVVSAPGKRFKEDTKVTDLLILYAEAVLAGEDYEDIFEA 71 (454)
T ss_pred CEEEEeCccccCCHH------HHHHHHHHHh---ccCCCEEEEEcCCcCCCCCccChHHHHHHHHHHHhcCCcHHHHHHH
Confidence 369999999999853 4666666665 346789999998653 676655433221100 000
Q ss_pred ccC-----------c------------------c--ccchHHHHHHhchHHHHHHHHHHhhcCCCCcce-----e-Eecc
Q 005041 85 LQK-----------P------------------Q--NELDGKACAAVGQSSLMALYDTLFSQLDVTSSQ-----L-LVTD 127 (717)
Q Consensus 85 l~~-----------~------------------~--~~l~~~~~~a~G~~~~~~~~~~~l~~~g~~~~~-----~-~~~~ 127 (717)
+.. . . .......+.+.|+.....++...|+..|+++.. + ++++
T Consensus 72 ~~~~~~~~~~~L~~~~~~~~~~~~~l~~l~~~~~~~~~~~~d~l~s~GE~~S~~l~a~~L~~~g~~a~~~~~~~~~~~t~ 151 (454)
T PRK09034 72 IIARYAEIAKELGLDADILEKIEEILEHLANLASRNPDRLLDAFKARGEDLNAKLIAAYLNYEGIPARYVDPKEAGIIVT 151 (454)
T ss_pred HHHHHHHHHHHhccchHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcEEEchHHceEEec
Confidence 000 0 0 000124677899888778888999999988753 3 4566
Q ss_pred cccCchhHhhHHHHHHHHHHhCCCeEEecCCCeeeccCCCCCCCCC-e-e--ecchHHHHHHHhhcCCCEEEEecccCcc
Q 005041 128 SDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSG-I-F--WDNDSLAGLLALELKADLLVLLSDVEGL 203 (717)
Q Consensus 128 ~d~~~~~~~~~~~~~i~~lL~~g~vPVv~g~d~v~~~~~~~~~~~~-~-~--~~sD~~A~~lA~~L~Ad~li~lTDV~GV 203 (717)
+++.+........+.+..++..+.|||+.|+-+... .|. + + ++||+.|+.+|.+|+|+.+.++||||||
T Consensus 152 ~~~~~a~i~~~~~~~~~~~~~~~~v~Vv~GFig~~~-------~g~~ttlgRggSD~tA~~la~~l~A~~~~i~tdV~Gi 224 (454)
T PRK09034 152 DEPGNAQVLPESYDNLKKLRDRDEKLVIPGFFGVTK-------DGQIVTFSRGGSDITGAILARGVKADLYENFTDVDGI 224 (454)
T ss_pred CCcCceeEcHhhHHHHHHHHhcCCEEEecCccccCC-------CCCEEecCCCcHHHHHHHHHHHcCCCEEEEEecCCcc
Confidence 666654333333466777777888999998433222 232 2 3 8999999999999999999999999999
Q ss_pred ccCCCc-cccccccccccccchhHHHhcCCCCCcccCChHHHHHHHHHHHHcCCcEEEEeCCCcchHHHHhcCCcceEEE
Q 005041 204 YSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLF 282 (717)
Q Consensus 204 ~~~dP~-~p~a~~i~~it~~e~~~~~~~gs~~~~~tggM~~Kv~aa~~a~~~gi~v~I~~g~~~~~l~~~~tg~~iGT~i 282 (717)
|+.||+ +|+++.+++||++|+.++...| ..-|.| ++...+.+++||++|.|.++|. ..||++
T Consensus 225 ~taDPr~v~~A~~l~~lsy~Ea~ela~~G------akvlhp--~ai~~a~~~~Ipi~v~~~~~p~---------~~GT~I 287 (454)
T PRK09034 225 YAANPRIVKNPKSIKEITYREMRELSYAG------FSVFHD--EALIPAYRGGIPINIKNTNNPE---------DPGTLI 287 (454)
T ss_pred CcCCCCCCCCCeECCccCHHHHHHHHhCC------cccCCH--HHHHHHHHcCCCEEEEcCCCCC---------CCccEE
Confidence 999995 9999999999999999877655 344555 5888899999999999988773 458888
Q ss_pred ecC
Q 005041 283 HRD 285 (717)
Q Consensus 283 ~a~ 285 (717)
...
T Consensus 288 ~~~ 290 (454)
T PRK09034 288 VPD 290 (454)
T ss_pred Eec
Confidence 654
No 208
>cd04247 AAK_AK-Hom3 AAK_AK-Hom3: Amino Acid Kinase Superfamily (AAK), AK-Hom3; this CD includes the N-terminal catalytic domain of the aspartokinase HOM3, a monofunctional class enzyme found in Saccharomyces cerevisiae and other related AK domains. Aspartokinase, the first enzyme in the aspartate metabolic pathway, catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP, and in fungi, is responsible for the production of threonine, isoleucine and methionine. S. cerevisiae has a single aspartokinase isoenzyme type, which is regulated by feedback, allosteric inhibition by L-threonine. Recent studies show that the allosteric transition triggered by binding of threonine to AK involves a large change in the conformation of the native hexameric enzyme that is converted to an inactive one of different shape and substantially smaller hydrodynamic size.
Probab=99.82 E-value=4.1e-19 Score=186.73 Aligned_cols=235 Identities=17% Similarity=0.209 Sum_probs=156.3
Q ss_pred eEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChh------HhhHHHHhhhhccC----CCccc---
Q 005041 18 RVVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAV------GVGRQRLRYRKLVN----SSLAD--- 84 (717)
Q Consensus 18 ~iVvKiGGs~l~~~~~~~~~~~l~~l~~~Ia~l~~~G~~vviVhGGg~------~~~~~~l~~~~~~~----~~~~~--- 84 (717)
++|.||||+++.+. ..++++.|..-...+.++|+|+|+.+ .++..+++...... ..+..
T Consensus 2 ~~V~KFGGtSv~~~--------~~~v~~~i~~~~~~~~~~vVVvSA~~~~~~~~gvTd~L~~~~~~a~~~~~~~~~~~l~ 73 (306)
T cd04247 2 WVVQKFGGTSVGKF--------PDNIADDIVKAYLKGNKVAVVCSARSTGTKAEGTTNRLLQAADEALDAQEKAFHDIVE 73 (306)
T ss_pred CEEEEeCchhhccH--------HHHHHHHHHhhhccCCceEEEEeccccCCCccChHHHHHHHHHHHHhhccccHHHHHH
Confidence 57999999999974 24555555544456778999999965 67766544332110 00000
Q ss_pred ------------c-cCcc----------------------c-------cchHHHHHHhchHHHHHHHHHHhhcCCCCcce
Q 005041 85 ------------L-QKPQ----------------------N-------ELDGKACAAVGQSSLMALYDTLFSQLDVTSSQ 122 (717)
Q Consensus 85 ------------l-~~~~----------------------~-------~l~~~~~~a~G~~~~~~~~~~~l~~~g~~~~~ 122 (717)
+ .... . .-....+.+.|+.....++...|++.|+++..
T Consensus 74 ~i~~~h~~~~~~L~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~l~~~~~~~~d~i~s~GE~lSa~l~a~~L~~~Gi~a~~ 153 (306)
T cd04247 74 DIRSDHLAAARKFIKNPELQAELEEEINKECELLRKYLEAAKILSEISPRTKDLVISTGEKLSCRFMAAVLRDRGVDAEY 153 (306)
T ss_pred HHHHHHHHHHHHhccChhhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEE
Confidence 0 0000 0 00113566889888878888999999988764
Q ss_pred e-----Eeccccc--CchhHhhHHHHHHH-HHHh-CCCeEEecCCCeeeccCCCCCCCCC-e-e--ecchHHHHHHHhhc
Q 005041 123 L-----LVTDSDF--RDEDFRKQLYDTVQ-SLLD-LRVIPIFNENDAVSTRKAPYEDSSG-I-F--WDNDSLAGLLALEL 189 (717)
Q Consensus 123 ~-----~~~~~d~--~~~~~~~~~~~~i~-~lL~-~g~vPVv~g~d~v~~~~~~~~~~~~-~-~--~~sD~~A~~lA~~L 189 (717)
+ +.++.+. .+...+....+.+. .+.+ .+.|||+.|+-+..+ .|. + + +++|++|+.+|..|
T Consensus 154 ld~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Vv~GFig~~~-------~G~~ttLGRgGsD~~A~~la~~l 226 (306)
T cd04247 154 VDLSHIVDLDFSIEALDQTFYDELAQVLGEKITACENRVPVVTGFFGNVP-------GGLLSQIGRGYTDLCAALCAVGL 226 (306)
T ss_pred EcHHHheecCCCccccccchhHHHHHHHHHHhhccCCceEEeeccEecCC-------CCCeEEeCCCchHHHHHHHHHHc
Confidence 3 3333221 11111111112222 2222 567999998432111 232 2 3 99999999999999
Q ss_pred CCCEEEEecccCccccCCCc-cccccccccccccchhHHHhcCCCCCcccCChHHHHHHHHHHHHcCCcEEEEeCCCcch
Q 005041 190 KADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDS 268 (717)
Q Consensus 190 ~Ad~li~lTDV~GV~~~dP~-~p~a~~i~~it~~e~~~~~~~gs~~~~~tggM~~Kv~aa~~a~~~gi~v~I~~g~~~~~ 268 (717)
+|+.++++|||||||+.||+ +|++++|++|+++|+.++..+|++ +.+.++...+.+.+||++|.|.++|+
T Consensus 227 ~a~~v~i~tdVdGvyt~DP~~~~~a~~i~~is~~ea~el~~~Gak--------VlHp~ti~pa~~~~Ipi~i~nt~~P~- 297 (306)
T cd04247 227 NADELQIWKEVDGIFTADPRKVPTARLLPSITPEEAAELTYYGSE--------VIHPFTMEQVIKARIPIRIKNVENPR- 297 (306)
T ss_pred CCCEEEEeecCCeeECCCCCCCCCCeEecccCHHHHHHHHhCcCc--------ccCHHHHHHHHHcCCcEEEecCCCCC-
Confidence 99999999999999999995 899999999999999987765533 33557888999999999999988774
Q ss_pred HHHHhcCCcceEEEec
Q 005041 269 IIKVLEGKRVGTLFHR 284 (717)
Q Consensus 269 l~~~~tg~~iGT~i~a 284 (717)
..||++.+
T Consensus 298 --------~~GT~I~~ 305 (306)
T cd04247 298 --------GEGTVIYP 305 (306)
T ss_pred --------CCCcEEcC
Confidence 45887754
No 209
>PLN02551 aspartokinase
Probab=99.82 E-value=5.7e-19 Score=198.63 Aligned_cols=239 Identities=18% Similarity=0.234 Sum_probs=167.0
Q ss_pred CCeEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChhHhhHHHHhhhhccCC------Cccc-----
Q 005041 16 VKRVVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNS------SLAD----- 84 (717)
Q Consensus 16 ~~~iVvKiGGs~l~~~~~~~~~~~l~~l~~~Ia~l~~~G~~vviVhGGg~~~~~~~l~~~~~~~~------~~~~----- 84 (717)
..++|.||||+++.+. +.+.++++.|... .+.++|+|+++.+.++..+++....... .+..
T Consensus 51 ~~~~V~KFGGtSv~~~------e~i~~v~~iI~~~--~~~~~vVVvSA~~~~Td~L~~~~~~a~~~~~~~~~~~~~l~~i 122 (521)
T PLN02551 51 QLTVVMKFGGSSVASA------ERMREVADLILSF--PDERPVVVLSAMGKTTNNLLLAGEKAVSCGVTNVSEIEELSAI 122 (521)
T ss_pred CceEEEEECCCccCCH------HHHHHHHHHHHhc--CCCCEEEEEcCCCCchHHHHHHHHHHhhccccchhhHHHHHHH
Confidence 3457999999999985 3577777777653 2446899999988788776543111000 0000
Q ss_pred ----------c--cCc--------------------c-ccchHHHHHHhchHHHHHHHHHHhhcCCCCcce-----e-Ee
Q 005041 85 ----------L--QKP--------------------Q-NELDGKACAAVGQSSLMALYDTLFSQLDVTSSQ-----L-LV 125 (717)
Q Consensus 85 ----------l--~~~--------------------~-~~l~~~~~~a~G~~~~~~~~~~~l~~~g~~~~~-----~-~~ 125 (717)
+ ... + ..-....+.+.|+.....++...|+..|+++.. + ++
T Consensus 123 ~~~h~~~~~~L~~~~~~~~~~~~~l~~ll~~i~~~~~~~~~~~d~ils~GE~lSa~lla~~L~~~Gi~a~~lda~~~gi~ 202 (521)
T PLN02551 123 RELHLRTADELGVDESVVEKLLDELEQLLKGIAMMKELTPRTRDYLVSFGERMSTRIFAAYLNKIGVKARQYDAFDIGFI 202 (521)
T ss_pred HHHHHHHHHHhhcchHHHHHHHHHHHHHHHhhhhhcccchHHHHHHHhHHHHHHHHHHHHHHHHCCCCcEEechHHcceE
Confidence 0 000 0 001224677999988888889999999988753 3 56
Q ss_pred cccccCchhHhhHHHHHHHHHH-----hCCCeEEecCCCeeeccCCCCCCCCCe--e--ecchHHHHHHHhhcCCCEEEE
Q 005041 126 TDSDFRDEDFRKQLYDTVQSLL-----DLRVIPIFNENDAVSTRKAPYEDSSGI--F--WDNDSLAGLLALELKADLLVL 196 (717)
Q Consensus 126 ~~~d~~~~~~~~~~~~~i~~lL-----~~g~vPVv~g~d~v~~~~~~~~~~~~~--~--~~sD~~A~~lA~~L~Ad~li~ 196 (717)
|+++|.+..........+.+.+ +.+.|||+.|+-+... ..|.. + ++||+.|+.+|.+|+|+.+.+
T Consensus 203 t~~~~~~a~i~~~~~~~l~~~l~~~~~~~~~v~Vv~GFig~~~------~~G~~ttLGRGGSD~sA~~la~~L~A~~v~I 276 (521)
T PLN02551 203 TTDDFTNADILEATYPAVAKRLHGDWIDDPAVPVVTGFLGKGW------KTGAITTLGRGGSDLTATTIGKALGLREIQV 276 (521)
T ss_pred ecCCCCccchhhhhHHHHHHHHHhhhccCCeEEEEcCccccCC------CCCcEEecCCChHHHHHHHHHHHcCCCEEEE
Confidence 6777766443222223333333 3568999998433220 12322 3 999999999999999999999
Q ss_pred ecccCccccCCCc-cccccccccccccchhHHHhcCCCCCcccCChHHHHHHHHHHHHcCCcEEEEeCCCcchHHHHhcC
Q 005041 197 LSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEG 275 (717)
Q Consensus 197 lTDV~GV~~~dP~-~p~a~~i~~it~~e~~~~~~~gs~~~~~tggM~~Kv~aa~~a~~~gi~v~I~~g~~~~~l~~~~tg 275 (717)
+|||||||+.||+ .|+++++++||++|+.++..+|. .-+ +.++...+.+++||++|.|.+.|+
T Consensus 277 ~tDV~Gi~taDPr~v~~A~~l~~lsy~Ea~elA~~Ga------kVl--hp~ai~pa~~~~Ipi~vknt~~p~-------- 340 (521)
T PLN02551 277 WKDVDGVLTCDPRIYPNAVPVPYLTFDEAAELAYFGA------QVL--HPQSMRPAREGDIPVRVKNSYNPT-------- 340 (521)
T ss_pred EeCCCceeCCCCCCCCCceEecccCHHHHHHHHhCCC------ccc--CHHHHHHHHHCCceEEEEecCCCC--------
Confidence 9999999999995 99999999999999998877663 334 447888999999999999987763
Q ss_pred CcceEEEecC
Q 005041 276 KRVGTLFHRD 285 (717)
Q Consensus 276 ~~iGT~i~a~ 285 (717)
..||++...
T Consensus 341 -~~GT~I~~~ 349 (521)
T PLN02551 341 -APGTLITKT 349 (521)
T ss_pred -CCCcEEecc
Confidence 569988654
No 210
>cd04240 AAK_UC AAK_UC: Uncharacterized (UC) amino acid kinase-like proteins found mainly in archaea and a few bacteria. Sequences in this CD are members of the Amino Acid Kinase (AAK) superfamily.
Probab=99.79 E-value=1.2e-18 Score=174.09 Aligned_cols=201 Identities=24% Similarity=0.326 Sum_probs=131.4
Q ss_pred EEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChhHhhHHHHhhhhccCCCcccccCccccchHHHHHH
Q 005041 20 VVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAA 99 (717)
Q Consensus 20 VvKiGGs~l~~~~~~~~~~~l~~l~~~Ia~l~~~G~~vviVhGGg~~~~~~~l~~~~~~~~~~~~l~~~~~~l~~~~~~a 99 (717)
|||||||.+.+ +..+.+.++.+. |++++||.|||+..++.+- .++. .++.+ ......++.+
T Consensus 1 vvKiGGsl~~~---------~~~~~~~l~~~~--~~~v~iV~GGG~~A~~~r~-~~~~--~g~~~-----~~ad~mgila 61 (203)
T cd04240 1 VVKIGGSLIRE---------AVRLLRWLKTLS--GGGVVIVPGGGPFADVVRR-YQER--KGLSD-----AAAHWMAILA 61 (203)
T ss_pred CEEEccccccc---------HHHHHHHHHhcc--CCCEEEEcCCcHHHHHHHH-HHHH--cCCCh-----HHHHHHHHHH
Confidence 79999999875 356667666553 8899999999996555432 1211 11111 1122334444
Q ss_pred hchHHHHHHHHHHhhcCCCCcceeEecccccCchhHhhHHHHHHHHHHhCCCeEEecCCCeeeccCCCCCCCCCee-ecc
Q 005041 100 VGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIF-WDN 178 (717)
Q Consensus 100 ~G~~~~~~~~~~~l~~~g~~~~~~~~~~~d~~~~~~~~~~~~~i~~lL~~g~vPVv~g~d~v~~~~~~~~~~~~~~-~~s 178 (717)
.-+..+ +|.... .. . . ......+..++..|.|||+.+....... ...+..+ +|+
T Consensus 62 t~~na~------~l~~~~--~~--~----------~-~~~~~~~~~~~~~g~ipV~~P~~~~~~~----~~~~~~~~~tt 116 (203)
T cd04240 62 MEQYGY------LLADLE--PR--L----------V-ARTLAELTDVLERGKIAILLPYRLLLDT----DPLPHSWEVTS 116 (203)
T ss_pred HHHHHH------HHhccC--Cc--c----------c-cCCHHHHHHHHHCCCcEEEeCchhhccc----CCCCcccccCH
Confidence 433322 222111 00 0 0 0013578888999999999752211100 0122234 999
Q ss_pred hHHHHHHHhhcCCCEEEEecccCccccCCCccccccccccccccchhHHHhcCCCCCcccCChHHHHHHHHHHHHcCCcE
Q 005041 179 DSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPV 258 (717)
Q Consensus 179 D~~A~~lA~~L~Ad~li~lTDV~GV~~~dP~~p~a~~i~~it~~e~~~~~~~gs~~~~~tggM~~Kv~aa~~a~~~gi~v 258 (717)
|++|+++|.+|+|++|+++|||||||++| +++|++|+.+|+.. . ... .+|.+|+ +.++|+++
T Consensus 117 D~lAa~lA~~l~A~~Li~ltdVdGVy~~d-----a~~i~~i~~~e~~~---~----~~i-d~~~~~~-----~~~~gi~v 178 (203)
T cd04240 117 DSIAAWLAKKLGAKRLVIVTDVDGIYEKD-----GKLVNEIAAAELLG---E----TSV-DPAFPRL-----LTKYGIRC 178 (203)
T ss_pred HHHHHHHHHHcCCCEEEEEeCCccccCCC-----CcCccccCHHHhCC---C----Cee-hhhHHHH-----HHhCCCeE
Confidence 99999999999999999999999999974 89999999876642 1 122 2355554 56789999
Q ss_pred EEEeCCCcchHHHHhcCC-cceEEE
Q 005041 259 VITSGFAMDSIIKVLEGK-RVGTLF 282 (717)
Q Consensus 259 ~I~~g~~~~~l~~~~tg~-~iGT~i 282 (717)
+|+||+.|+++...+.|+ ..||.+
T Consensus 179 ~I~~g~~~~~l~~~l~g~~~~GT~I 203 (203)
T cd04240 179 YVVNGDDPERVLAALRGREGVGTRI 203 (203)
T ss_pred EEECCCCccHHHHHHCCCCCCCCCC
Confidence 999999999998888887 678753
No 211
>PRK09466 metL bifunctional aspartate kinase II/homoserine dehydrogenase II; Provisional
Probab=99.79 E-value=1.3e-18 Score=205.10 Aligned_cols=239 Identities=15% Similarity=0.166 Sum_probs=167.5
Q ss_pred hccCCeEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChhHhhHHHHhhhhccCCCc---cc-----
Q 005041 13 LKNVKRVVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSL---AD----- 84 (717)
Q Consensus 13 ~~~~~~iVvKiGGs~l~~~~~~~~~~~l~~l~~~Ia~l~~~G~~vviVhGGg~~~~~~~l~~~~~~~~~~---~~----- 84 (717)
.-+|++.|.||||+++.+.+ .+.++++.|....+. ++++|+++.+.++..++...+....+. ..
T Consensus 7 ~~~M~~~V~KFGGtSv~~~e------~i~~v~~iI~~~~~~--~~vVVVSA~~~~Td~L~~~~~~~~~~~~~~~~~l~~i 78 (810)
T PRK09466 7 AGAMGRQLHKFGGSSLADAK------CYRRVAGILAEYSQP--DDLVVVSAAGKTTNQLISWLKLSQTDRLSAHQVQQTL 78 (810)
T ss_pred cccceeEEEEECccccCCHH------HHHHHHHHHhhhccC--CEEEEEcCCCCCHHHHHHHHHHhhcCchhHHHHHHHH
Confidence 33456789999999999853 577778777654333 388999998888887655433211000 00
Q ss_pred ----------c-c-Ccc----------------------ccchHHHHHHhchHHHHHHHHHHhhcCCCCccee-----Ee
Q 005041 85 ----------L-Q-KPQ----------------------NELDGKACAAVGQSSLMALYDTLFSQLDVTSSQL-----LV 125 (717)
Q Consensus 85 ----------l-~-~~~----------------------~~l~~~~~~a~G~~~~~~~~~~~l~~~g~~~~~~-----~~ 125 (717)
+ . ..+ .......+.+.|+.....++...|+..|+++..+ +.
T Consensus 79 ~~~h~~~~~~L~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~~d~ils~GE~~Sa~lla~~L~~~G~~a~~ld~~~~i~ 158 (810)
T PRK09466 79 RRYQQDLIEGLLPAEQARSLLSRLISDLERLAALLDGGINDAQYAEVVGHGEVWSARLMAALLNQQGLPAAWLDARSFLR 158 (810)
T ss_pred HHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHHHhhccCCchhhhheecHHHHHHHHHHHHHHHhCCCCcEEEcHHHhee
Confidence 0 0 000 0001245668899888888899999999887543 33
Q ss_pred cccccCchhH-hhHHHHHHHHHHhCC--CeEEecCCCeeeccCCCCCCCCC-e-e--ecchHHHHHHHhhcCCCEEEEec
Q 005041 126 TDSDFRDEDF-RKQLYDTVQSLLDLR--VIPIFNENDAVSTRKAPYEDSSG-I-F--WDNDSLAGLLALELKADLLVLLS 198 (717)
Q Consensus 126 ~~~d~~~~~~-~~~~~~~i~~lL~~g--~vPVv~g~d~v~~~~~~~~~~~~-~-~--~~sD~~A~~lA~~L~Ad~li~lT 198 (717)
++..+ .... .....+.+++++..+ .|||++|+.+... .|. + + ++||+.|+.+|.+|+|+.+.++|
T Consensus 159 ~~~~~-~~~i~~~~~~~~l~~~~~~~~~~v~Vv~GF~g~~~-------~G~~ttLGRGGSD~tA~~la~~l~A~~v~i~t 230 (810)
T PRK09466 159 AERAA-QPQVDEGLSYPLLQQLLAQHPGKRLVVTGFISRNE-------AGETVLLGRNGSDYSATLIGALAGVERVTIWS 230 (810)
T ss_pred cCCCC-CcccchhhhHHHHHHHHhccCCeEEEeeCccccCC-------CCCEEEcCCChHHHHHHHHHHHcCCCEEEEEe
Confidence 33332 2111 122246777777654 7999998443222 232 2 3 89999999999999999999999
Q ss_pred ccCccccCCCc-cccccccccccccchhHHHhcCCCCCcccCChHHHHHHHHHHHHcCCcEEEEeCCCcchHHHHhcCCc
Q 005041 199 DVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKR 277 (717)
Q Consensus 199 DV~GV~~~dP~-~p~a~~i~~it~~e~~~~~~~gs~~~~~tggM~~Kv~aa~~a~~~gi~v~I~~g~~~~~l~~~~tg~~ 277 (717)
||||||+.||+ +|++++|++||++|+.++...|++ -+ +.++...+.+.+||++|.|.++|+ .
T Consensus 231 DV~Gi~taDPr~v~~A~~i~~isy~Ea~ela~~Gak------Vl--Hp~ti~pa~~~~Ipi~V~ntf~p~---------~ 293 (810)
T PRK09466 231 DVAGVYSADPRKVKDACLLPLLRLDEASELARLAAP------VL--HARTLQPVSGSDIDLQLRCSYQPE---------Q 293 (810)
T ss_pred CCCccccCCcccCCCceEcccCCHHHHHHHHHcCcc------cc--CHHHHHHHHHcCCeEEEecCCCCC---------C
Confidence 99999999995 899999999999999998776643 34 446888999999999999988774 4
Q ss_pred ceEEEec
Q 005041 278 VGTLFHR 284 (717)
Q Consensus 278 iGT~i~a 284 (717)
.||++..
T Consensus 294 ~GT~I~~ 300 (810)
T PRK09466 294 GSTRIER 300 (810)
T ss_pred CceEEec
Confidence 5888864
No 212
>PRK08961 bifunctional aspartate kinase/diaminopimelate decarboxylase protein; Provisional
Probab=99.78 E-value=2.8e-18 Score=205.97 Aligned_cols=239 Identities=18% Similarity=0.168 Sum_probs=168.3
Q ss_pred CCeEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChhHhhHHHHhhhhccCC-Ccc-----------
Q 005041 16 VKRVVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNS-SLA----------- 83 (717)
Q Consensus 16 ~~~iVvKiGGs~l~~~~~~~~~~~l~~l~~~Ia~l~~~G~~vviVhGGg~~~~~~~l~~~~~~~~-~~~----------- 83 (717)
++++|.||||+++.+.+ .+.++++.|+.-.+.|.++|+|.|+.+.++..++........ .+.
T Consensus 7 ~~~~V~KFGGtSv~~~~------~~~~v~~ii~~~~~~~~~~vvVvSA~~~~Td~L~~~~~~~~~~~~~~~~~~i~~~~~ 80 (861)
T PRK08961 7 DRWVVLKFGGTSVSRRH------RWDTIAKIVRKRLAEGGRVLVVVSALSGVSNELEAIIAAAGAGDSASRVAAIRQRHR 80 (861)
T ss_pred CCcEEEEECccccCCHH------HHHHHHHHHHhhcccCCCEEEEEeCCCCchHHHHHHHHHHhccCHHHHHHHHHHHHH
Confidence 46789999999999853 478888888765566889999999988888876543211000 000
Q ss_pred c----c--cCcc--------c--------------cchHHHHHHhchHHHHHHHHHHhhcCCCCcc-----eeEeccccc
Q 005041 84 D----L--QKPQ--------N--------------ELDGKACAAVGQSSLMALYDTLFSQLDVTSS-----QLLVTDSDF 130 (717)
Q Consensus 84 ~----l--~~~~--------~--------------~l~~~~~~a~G~~~~~~~~~~~l~~~g~~~~-----~~~~~~~d~ 130 (717)
+ + +..+ + .-....+.+.|+.....++...|+..|+++. +++.+++++
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~i~s~GE~lSa~lla~~L~~~Gi~a~~ld~~~~~~~~~~~ 160 (861)
T PRK08961 81 ELLAELGVDAEAVLAERLAALQRLLDGIRALTRASLRWQAEVLGQGELLSTTLGAAYLEASGLDMGWLDAREWLTALPQP 160 (861)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHHHHHHHHHhccCChhhhheEEEehHHHHHHHHHHHHHhCCCCcEEEcHHHhEeecCcc
Confidence 0 0 0000 0 0001233477887777788899999998875 334444321
Q ss_pred C--chhHh-------hHHHHHHHHHHhCC-CeEEecCCCeeeccCCCCCCCCC--ee--ecchHHHHHHHhhcCCCEEEE
Q 005041 131 R--DEDFR-------KQLYDTVQSLLDLR-VIPIFNENDAVSTRKAPYEDSSG--IF--WDNDSLAGLLALELKADLLVL 196 (717)
Q Consensus 131 ~--~~~~~-------~~~~~~i~~lL~~g-~vPVv~g~d~v~~~~~~~~~~~~--~~--~~sD~~A~~lA~~L~Ad~li~ 196 (717)
. ....+ ......+..+++.+ .|||+.|+-+... .|. ++ ++||++|+.+|.+|+|++|++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Vv~Gf~g~~~-------~g~~ttLgrggsD~~A~~iA~~l~a~~~~i 233 (861)
T PRK08961 161 NQSEWSQYLSVSCQWQSDPALRERFAAQPAQVLITQGFIARNA-------DGGTALLGRGGSDTSAAYFAAKLGASRVEI 233 (861)
T ss_pred ccccccccccceecHhhHHHHHHHHhccCCeEEEeCCcceeCC-------CCCEEEEeCCchHHHHHHHHHHcCCCEEEE
Confidence 1 11111 12345666666665 4999998443332 232 23 999999999999999999999
Q ss_pred ecccCccccCCCc-cccccccccccccchhHHHhcCCCCCcccCChHHHHHHHHHHHHcCCcEEEEeCCCcchHHHHhcC
Q 005041 197 LSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEG 275 (717)
Q Consensus 197 lTDV~GV~~~dP~-~p~a~~i~~it~~e~~~~~~~gs~~~~~tggM~~Kv~aa~~a~~~gi~v~I~~g~~~~~l~~~~tg 275 (717)
+|||||||++||+ +|++++|++|+++|+.++.. .|+|+.|.+++..+.++|||++|.|++.|+
T Consensus 234 ~tdv~Gv~t~dP~~~~~a~~i~~ls~~e~~el~~--------~g~~v~~~~a~~~a~~~~i~i~v~~~~~~~-------- 297 (861)
T PRK08961 234 WTDVPGMFSANPKEVPDARLLTRLDYDEAQEIAT--------TGAKVLHPRSIKPCRDAGIPMAILDTERPD-------- 297 (861)
T ss_pred EeCCCccccCCCCCCCCceEecccCHHHHHHHHH--------CCCeEECHHHHHHHHHCCCCEEEEeCCCCC--------
Confidence 9999999999995 89999999999999998654 467888999999999999999999998774
Q ss_pred CcceEEEec
Q 005041 276 KRVGTLFHR 284 (717)
Q Consensus 276 ~~iGT~i~a 284 (717)
..||++..
T Consensus 298 -~~gT~I~~ 305 (861)
T PRK08961 298 -LSGTSIDG 305 (861)
T ss_pred -CCccEEeC
Confidence 34666653
No 213
>PRK09436 thrA bifunctional aspartokinase I/homoserine dehydrogenase I; Provisional
Probab=99.76 E-value=8e-18 Score=199.95 Aligned_cols=236 Identities=18% Similarity=0.228 Sum_probs=168.5
Q ss_pred EEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChhHhhHHHHhhhhccCC---Cc----------c--
Q 005041 19 VVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNS---SL----------A-- 83 (717)
Q Consensus 19 iVvKiGGs~l~~~~~~~~~~~l~~l~~~Ia~l~~~G~~vviVhGGg~~~~~~~l~~~~~~~~---~~----------~-- 83 (717)
.|.||||+++.+. +.+.++++.|....+. .++|+|+|+.+.++..++........ .+ +
T Consensus 2 ~V~KFGGtSv~~~------~~i~~v~~iI~~~~~~-~~~vVVVSA~~~vTd~L~~~~~~~~~~~~~~~~~~~~~~~~h~~ 74 (819)
T PRK09436 2 RVLKFGGTSVANA------ERFLRVADIIESNARQ-EQVAVVLSAPAKVTNHLVAMIEKAAKGDDAYPEILDAERIFHEL 74 (819)
T ss_pred EEEEeCccccCCH------HHHHHHHHHHHhhccc-CCEEEEEcCCcCcHHHHHHHHHHHhcCCchHHHHHHHHHHHHHH
Confidence 5899999999985 3577777777765443 68999999988888877554321100 00 0
Q ss_pred --cc----cC---c-----------cc-----------cc---hHHHHHHhchHHHHHHHHHHhhcCCCCcce-----eE
Q 005041 84 --DL----QK---P-----------QN-----------EL---DGKACAAVGQSSLMALYDTLFSQLDVTSSQ-----LL 124 (717)
Q Consensus 84 --~l----~~---~-----------~~-----------~l---~~~~~~a~G~~~~~~~~~~~l~~~g~~~~~-----~~ 124 (717)
++ .. . ++ .+ ....+.+.|+.....++...|+..|+++.. ++
T Consensus 75 ~~~l~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~~~~~~~~~~~~d~i~s~GE~lSa~lla~~L~~~Gi~a~~ld~~~~i 154 (819)
T PRK09436 75 LDGLAAALPGFDLAQLKAKVDQEFAQLKDILHGISLLGECPDSVNAAIISRGERLSIAIMAAVLEARGHDVTVIDPRELL 154 (819)
T ss_pred HHHHHhhccchhhHHHHHHHHHHHHHHHHHHHHHHhhccCChhhhhheeeHHHHHHHHHHHHHHHhCCCCeEEECHHHeE
Confidence 00 00 0 00 00 123566888887777888999999987753 35
Q ss_pred ecccccCchhH-hhHHHHHHHHHH-hCCCeEEecCCCeeeccCCCCCCCCCe--e--ecchHHHHHHHhhcCCCEEEEec
Q 005041 125 VTDSDFRDEDF-RKQLYDTVQSLL-DLRVIPIFNENDAVSTRKAPYEDSSGI--F--WDNDSLAGLLALELKADLLVLLS 198 (717)
Q Consensus 125 ~~~~d~~~~~~-~~~~~~~i~~lL-~~g~vPVv~g~d~v~~~~~~~~~~~~~--~--~~sD~~A~~lA~~L~Ad~li~lT 198 (717)
++++++.+... +......+++++ +.+.|||+.|+-+.. ..|.. + ++||++|+.+|.+|+||.|+++|
T Consensus 155 ~t~~~~~~~~~~~~~~~~~i~~~~~~~~~v~Vv~Gfig~~-------~~G~~ttlGRgGSD~~A~~~A~~l~A~~~~i~t 227 (819)
T PRK09436 155 LADGHYLESTVDIAESTRRIAASFIPADHVILMPGFTAGN-------EKGELVTLGRNGSDYSAAILAACLDADCCEIWT 227 (819)
T ss_pred EecCCCCCceechHhhHHHHHHHHhcCCcEEEecCcccCC-------CCCCEEEeCCCCchHHHHHHHHHcCCCEEEEEE
Confidence 66666554333 222235566654 468899999833211 12322 3 78999999999999999999999
Q ss_pred ccCccccCCCc-cccccccccccccchhHHHhcCCCCCcccCChHHHHHHHHHHHHcCCcEEEEeCCCcchHHHHhcCCc
Q 005041 199 DVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKR 277 (717)
Q Consensus 199 DV~GV~~~dP~-~p~a~~i~~it~~e~~~~~~~gs~~~~~tggM~~Kv~aa~~a~~~gi~v~I~~g~~~~~l~~~~tg~~ 277 (717)
||||||+.||+ +|++++|++|+++|+.++... |-++.+.+++..+.+++||++|.|+++|+ .
T Consensus 228 dVdGvyt~DP~~~~~A~~i~~isy~ea~el~~~--------G~kvlhp~a~~~a~~~~Ipi~i~n~~~p~---------~ 290 (819)
T PRK09436 228 DVDGVYTADPRVVPDARLLKSLSYQEAMELSYF--------GAKVLHPRTIAPIAQFQIPCLIKNTFNPQ---------A 290 (819)
T ss_pred CCCceECCCCCCCCCCeEeeEecHHHHHHHHhc--------CCccchHHHHHHHHHCCceEEEccCCCCC---------C
Confidence 99999999995 899999999999999986553 33567889999999999999999998875 4
Q ss_pred ceEEEecC
Q 005041 278 VGTLFHRD 285 (717)
Q Consensus 278 iGT~i~a~ 285 (717)
.||.+...
T Consensus 291 ~GT~I~~~ 298 (819)
T PRK09436 291 PGTLIGAE 298 (819)
T ss_pred CceEEEec
Confidence 68888653
No 214
>PRK09181 aspartate kinase; Validated
Probab=99.65 E-value=1.4e-15 Score=169.78 Aligned_cols=162 Identities=19% Similarity=0.198 Sum_probs=121.0
Q ss_pred HHHHHhchHHHHHHHHHHhhcCCCCcceeEecccccCchhHhhHHHHHHHHHHh----CCCeEEecCCCeeeccCCCCCC
Q 005041 95 KACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLD----LRVIPIFNENDAVSTRKAPYED 170 (717)
Q Consensus 95 ~~~~a~G~~~~~~~~~~~l~~~g~~~~~~~~~~~d~~~~~~~~~~~~~i~~lL~----~g~vPVv~g~d~v~~~~~~~~~ 170 (717)
..+.+.|+.....++...|+..|+++..+..+. +....... ..+.+.+.++ .+.|||+.|+. .+ .
T Consensus 140 D~l~s~GE~lSa~lla~~L~~~Gi~a~~ld~~~--~~~~~~~~-~~~~i~~~l~~~~~~~~v~Vv~GF~--~~------~ 208 (475)
T PRK09181 140 EMLASIGEAHSAFNTALLLQNRGVNARFVDLTG--WDDDDPLT-LDERIKKAFKDIDVTKELPIVTGYA--KC------K 208 (475)
T ss_pred HHHhhHhHHHHHHHHHHHHHhCCCCeEEecccc--ccCCcccc-hHHHHHHHHhhhccCCcEEEecCCc--CC------C
Confidence 456688888777888899999998887543221 11000111 1345555555 47899999842 22 1
Q ss_pred CCC-e-e--ecchHHHHHHHhhcCCCEEEEecccCccccCCCc-c--ccccccccccccchhHHHhcCCCCCcccCChHH
Q 005041 171 SSG-I-F--WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-E--PNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTA 243 (717)
Q Consensus 171 ~~~-~-~--~~sD~~A~~lA~~L~Ad~li~lTDV~GV~~~dP~-~--p~a~~i~~it~~e~~~~~~~gs~~~~~tggM~~ 243 (717)
.|. + + ++||+.|+.+|.+|+|+.+.++|||+ ||+.||+ . |++++|++||++|+.++...|++ +.
T Consensus 209 ~G~itTLGRGGSDyTAailAa~L~A~~~~IwTDV~-I~taDPriV~~~~A~~i~~lsy~Ea~ELA~~GAk--------VL 279 (475)
T PRK09181 209 EGLMRTFDRGYSEMTFSRIAVLTGADEAIIHKEYH-LSSADPKLVGEDKVVPIGRTNYDVADQLANLGME--------AI 279 (475)
T ss_pred CCCEEecCCChHHHHHHHHHHHcCCCEEEEeCCCc-cccCCCCcCCCCCCeEcCccCHHHHHHHHHcCch--------hc
Confidence 232 2 3 99999999999999999999999997 9999996 6 79999999999999998776643 33
Q ss_pred HHHHHHHHHHcCCcEEEEeCCCcchHHHHhcCCcceEEEecC
Q 005041 244 KVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRD 285 (717)
Q Consensus 244 Kv~aa~~a~~~gi~v~I~~g~~~~~l~~~~tg~~iGT~i~a~ 285 (717)
+.++...+.+.+||++|.|-++|+ ..||++...
T Consensus 280 Hp~ti~pa~~~~Ipi~V~nt~~p~---------~~GT~I~~~ 312 (475)
T PRK09181 280 HPKAAKGLRQAGIPLRIKNTFEPE---------HPGTLITKD 312 (475)
T ss_pred CHHHHHHHHHcCCeEEEecCCCCC---------CCCeEEecC
Confidence 457889999999999999987764 469998654
No 215
>cd04248 AAK_AK-Ectoine AAK_AK-Ectoine: Amino Acid Kinase Superfamily (AAK), AK-Ectoine; this CD includes the N-terminal catalytic domain of the aspartokinase of the ectoine (1,4,5,6-tetrahydro-2-methyl pyrimidine-4-carboxylate) biosynthetic pathway found in Methylomicrobium alcaliphilum, Vibrio cholerae, and other various halotolerant or halophilic bacteria. Bacteria exposed to hyperosmotic stress accumulate organic solutes called 'compatible solutes' of which ectoine, a heterocyclic amino acid, is one. Apart from its osmotic function, ectoine also exhibits a protective effect on proteins, nucleic acids and membranes against a variety of stress factors. de novo synthesis of ectoine starts with the phosphorylation of L-aspartate and shares its first two enzymatic steps with the biosynthesis of amino acids of the aspartate family: aspartokinase and L-aspartate-semialdehyde dehydrogenase. The M. alcaliphilum and the V. cholerae aspartokinases are encoded on the ectABCask operon.
Probab=99.64 E-value=5.5e-15 Score=153.36 Aligned_cols=152 Identities=15% Similarity=0.150 Sum_probs=111.0
Q ss_pred HHHHhchHHHHHHHHHHhhcCCCCcceeEecc----cccCchhHhhHHHHHHHHHHhCCCeEEecCCCeeeccCCCCCCC
Q 005041 96 ACAAVGQSSLMALYDTLFSQLDVTSSQLLVTD----SDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDS 171 (717)
Q Consensus 96 ~~~a~G~~~~~~~~~~~l~~~g~~~~~~~~~~----~d~~~~~~~~~~~~~i~~lL~~g~vPVv~g~d~v~~~~~~~~~~ 171 (717)
.+.++|+..+..++...|+..|+++..+..+. +++..... ..+.+..+...+.|||+.|+. .+ ..
T Consensus 135 ~l~S~GE~~Sa~l~a~~L~~~Gi~A~~vD~~~~~~~~~~t~~~~---i~~~~~~~~~~~~v~IvtGF~--~~------~~ 203 (304)
T cd04248 135 LLASLGEAHSAFNTALLLQNRGVNARFVDLSGWRDSGDMTLDER---ISEAFRDIDPRDELPIVTGYA--KC------AE 203 (304)
T ss_pred HHhhhCHHHHHHHHHHHHHHCCCCeEEECcccccccCCCCcHHH---HHHHHHhhccCCcEEEeCCcc--CC------CC
Confidence 56688887777777888999998876432221 11111111 112233333367899999842 11 13
Q ss_pred CCe--e--ecchHHHHHHHhhcCCCEEEEecccCccccCCCc-c--ccccccccccccchhHHHhcCCCCCcccCChHHH
Q 005041 172 SGI--F--WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-E--PNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAK 244 (717)
Q Consensus 172 ~~~--~--~~sD~~A~~lA~~L~Ad~li~lTDV~GV~~~dP~-~--p~a~~i~~it~~e~~~~~~~gs~~~~~tggM~~K 244 (717)
|.. + +.||+.|+.+|.+|+|+.+.++|||+ ||+.||+ + |+++.|++||++|+.++...|. ..+ +
T Consensus 204 G~itTLGRGGSDyTAs~iAa~l~A~ev~I~TDV~-i~taDPriV~~~~A~~i~~lsY~EA~ELA~~Ga------kvL--H 274 (304)
T cd04248 204 GLMREFDRGYSEMTFSRIAVLTGASEAIIHKEFH-LSSADPKLVGEDKARPIGRTNYDVADQLANLGM------EAI--H 274 (304)
T ss_pred CCEEEcCCCcHHHHHHHHHHHcCCCEEEEECCCc-eecCCCCccCCCCceEeCccCHHHHHHHHHcCh------hhc--C
Confidence 332 3 99999999999999999999999996 9999996 6 6899999999999999877653 333 4
Q ss_pred HHHHHHHHHcCCcEEEEeCCCcc
Q 005041 245 VNAAYCAACAGIPVVITSGFAMD 267 (717)
Q Consensus 245 v~aa~~a~~~gi~v~I~~g~~~~ 267 (717)
.+++..+.+++||++|.|.++|+
T Consensus 275 P~ai~pa~~~~IPi~Vkntf~P~ 297 (304)
T cd04248 275 PKAAKGLRQAGIPLRVKNTFEPD 297 (304)
T ss_pred HHHHHHHHHcCCeEEEecCCCCC
Confidence 46888999999999999988774
No 216
>KOG0456 consensus Aspartate kinase [Amino acid transport and metabolism]
Probab=99.48 E-value=3e-13 Score=139.74 Aligned_cols=237 Identities=15% Similarity=0.183 Sum_probs=153.1
Q ss_pred eEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChhHhhHHHHhhhhccC-CCccc------------
Q 005041 18 RVVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVN-SSLAD------------ 84 (717)
Q Consensus 18 ~iVvKiGGs~l~~~~~~~~~~~l~~l~~~Ia~l~~~G~~vviVhGGg~~~~~~~l~~~~~~~-~~~~~------------ 84 (717)
..|.||||+++..-. ..+..++..+.-...+++||-++....+..++...+... .+..+
T Consensus 80 ~~V~KFGGsSV~s~~--------~~i~v~~l~~~~~~e~~~vV~SA~sk~Tna~~ta~~~~~~c~va~~~sie~l~iIke 151 (559)
T KOG0456|consen 80 TCVMKFGGSSVGSAE--------RMIEVAVLILYFPDERPVVVLSAMSKTTNALLTAGEKAVCCGVANVESIEELSIIKE 151 (559)
T ss_pred EEEEecCCccccccc--------hhhhhhHHHHhcCCCCeEEEEEccccchhhhhhhhhheecccccCcchHHHHHHHHH
Confidence 689999999999753 222333333434466899999998766664432111000 00000
Q ss_pred --ccCc---------ccc--------c------------hHHHHHHhchHHHHHHHHHHhhcCCCCcceeEe------cc
Q 005041 85 --LQKP---------QNE--------L------------DGKACAAVGQSSLMALYDTLFSQLDVTSSQLLV------TD 127 (717)
Q Consensus 85 --l~~~---------~~~--------l------------~~~~~~a~G~~~~~~~~~~~l~~~g~~~~~~~~------~~ 127 (717)
++.. +.. | .+.-+.++|++..-.++...|+..|..+.|.-. +.
T Consensus 152 ~Hi~ta~e~~~d~~v~~~~le~leq~Lk~i~mm~Elt~RTrD~lvs~GE~lS~rf~aA~lnd~G~kar~~D~~~I~~~~~ 231 (559)
T KOG0456|consen 152 LHIRTAHELIVDPAVIAKLLEGLEQLLKGIAMMKELTLRTRDYLVSFGECLSTRFFAAYLNDIGHKARQYDAFEIGFITT 231 (559)
T ss_pred HHHhhHHHhccCHHHHHHHHHHHHHHHHHHHHHHhcchhhhhHhhhhhhHHHHHHHHHHHHhcCccceeechhheecccc
Confidence 0000 000 0 012345788877777778899999988887632 22
Q ss_pred cccCc-hhHhhHHHHHHHHH----HhCCCeEEecCCCeeeccCCCCCCCCC--ee--ecchHHHHHHHhhcCCCEEEEec
Q 005041 128 SDFRD-EDFRKQLYDTVQSL----LDLRVIPIFNENDAVSTRKAPYEDSSG--IF--WDNDSLAGLLALELKADLLVLLS 198 (717)
Q Consensus 128 ~d~~~-~~~~~~~~~~i~~l----L~~g~vPVv~g~d~v~~~~~~~~~~~~--~~--~~sD~~A~~lA~~L~Ad~li~lT 198 (717)
+++.+ ...+...+...+.+ -..+.|||+.|+=. -++. .+. ++ +.+|..|+.+|.+|++|.+.++.
T Consensus 232 d~~t~~d~~~a~~~av~k~~~~~~aken~VPVvTGf~G-----k~~~-tg~lt~lGRG~sDl~At~i~~al~~~EiQVWK 305 (559)
T KOG0456|consen 232 DDFTNDDILEATYPAVSKLLSGDWAKENAVPVVTGFLG-----KGWP-TGALTTLGRGGSDLTATTIGKALGLDEIQVWK 305 (559)
T ss_pred ccccchhHHHHHHHHHHHhcccccccCCccceEeeccc-----cCcc-ccceecccCCchhhHHHHHHHHcCchhhhhhh
Confidence 33332 11222223333222 24578999997221 0111 111 12 88999999999999999999999
Q ss_pred ccCccccCCC-ccccccccccccccchhHHHhcCCCCCcccCChHHHHHHHHHHHHcCCcEEEEeCCCcchHHHHhcCCc
Q 005041 199 DVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKR 277 (717)
Q Consensus 199 DV~GV~~~dP-~~p~a~~i~~it~~e~~~~~~~gs~~~~~tggM~~Kv~aa~~a~~~gi~v~I~~g~~~~~l~~~~tg~~ 277 (717)
|||||++.|| ..|.++++|.+|++|+.++-.+|+. .-+...+..+.+..||++|-|...|- .
T Consensus 306 dVDGv~T~DP~~~p~Ar~vp~lT~dEAaELaYfGaq--------VlHP~sM~~~~~~~IPvRvKN~~NP~---------~ 368 (559)
T KOG0456|consen 306 DVDGVLTCDPRIYPGARLVPYLTFDEAAELAYFGAQ--------VLHPFSMRPAREGRIPVRVKNSYNPT---------A 368 (559)
T ss_pred hcCceEecCCccCCCccccCccCHHHHHHHHhhhhh--------hccccccchhhccCcceEeecCCCCC---------C
Confidence 9999999999 5999999999999999987777643 22345666788889999999977663 5
Q ss_pred ceEEEecC
Q 005041 278 VGTLFHRD 285 (717)
Q Consensus 278 iGT~i~a~ 285 (717)
.||++.++
T Consensus 369 ~GTvI~~d 376 (559)
T KOG0456|consen 369 PGTVITPD 376 (559)
T ss_pred CceEeccc
Confidence 69988876
No 217
>COG2054 Uncharacterized archaeal kinase related to aspartokinases, uridylate kinases [General function prediction only]
Probab=99.41 E-value=9e-12 Score=116.84 Aligned_cols=98 Identities=23% Similarity=0.314 Sum_probs=80.3
Q ss_pred Cee-ecchHHHHHHHhhcCCCEEEEecccCccccCCCccccccccccccccchhHHHhcCCCCCcccCChHHHHHHHHHH
Q 005041 173 GIF-WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCA 251 (717)
Q Consensus 173 ~~~-~~sD~~A~~lA~~L~Ad~li~lTDV~GV~~~dP~~p~a~~i~~it~~e~~~~~~~gs~~~~~tggM~~Kv~aa~~a 251 (717)
..| +.||+++.++|+++++.++|+.|||||||+.+| .++++++|+.+|+.. | ...-.+..|+ .+
T Consensus 112 HSW~VTSDsis~~Ia~~~~~~~vv~aTDVdGI~~~~~---~~kLv~eI~A~dl~~----~---~t~vD~~~P~-----Ll 176 (212)
T COG2054 112 HSWEVTSDSISVWIAAKAGATEVVKATDVDGIYEEDP---KGKLVREIRASDLKT----G---ETSVDPYLPK-----LL 176 (212)
T ss_pred cceeecccHHHHHHHHHcCCcEEEEEecCCcccccCC---cchhhhhhhHhhccc----C---cccccchhhH-----HH
Confidence 346 999999999999999999999999999999875 468999999988864 1 1223445666 46
Q ss_pred HHcCCcEEEEeCCCcchHHHHhcCC-cceEEEecC
Q 005041 252 ACAGIPVVITSGFAMDSIIKVLEGK-RVGTLFHRD 285 (717)
Q Consensus 252 ~~~gi~v~I~~g~~~~~l~~~~tg~-~iGT~i~a~ 285 (717)
.+.+..++++||+.|+++.....|+ .+||.+...
T Consensus 177 ~k~~m~~~Vvng~~pervi~~lrGk~~v~T~Ivg~ 211 (212)
T COG2054 177 VKYKMNCRVVNGKEPERVILALRGKEVVGTLIVGG 211 (212)
T ss_pred HHcCCceEEECCCCHHHHHHHHhccccceEEEeCC
Confidence 7888999999999999998887774 579988753
No 218
>KOG2436 consensus Acetylglutamate kinase/acetylglutamate synthase [Amino acid transport and metabolism]
Probab=99.40 E-value=1.1e-12 Score=140.86 Aligned_cols=227 Identities=19% Similarity=0.199 Sum_probs=149.8
Q ss_pred HHHHHHHHHHHHHCCCeEEEEecChhHhhHHHHhhhhccCCCcccc-cCcc---ccchHHHHHHhchHHHHHHHHHHhhc
Q 005041 40 LGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADL-QKPQ---NELDGKACAAVGQSSLMALYDTLFSQ 115 (717)
Q Consensus 40 l~~l~~~Ia~l~~~G~~vviVhGGg~~~~~~~l~~~~~~~~~~~~l-~~~~---~~l~~~~~~a~G~~~~~~~~~~~l~~ 115 (717)
++.++++++.|+..|.++|||||+++|+++.+ ..+++++.|.+. +.+. |.+.+. .-+++..+. +-..|++
T Consensus 111 ~~sl~s~lafl~h~gl~pIvv~g~~~qin~~l--~~~~ie~~y~~~~RvTda~t~q~~~~--~~~~E~n~~--lv~nL~~ 184 (520)
T KOG2436|consen 111 LHSLASDLAFLHHVGLRPIVVPGTQPQINRLL--AERGIEPEYVDGYRVTDAHTLQAAKE--SVSLEANLN--LVINLSQ 184 (520)
T ss_pred HHHHHHHHHHHhcCCceEEEecCccHHHHHHH--HHcCCCcccccceecccHHHHHHhhh--cchhhhhhH--HHHHHHH
Confidence 78899999999999999999999999999955 356777777762 2222 222111 011221111 1123333
Q ss_pred CCCCcce---------eEecc-------cccCchhH-hhHHHHHHHHHHhCCCeEEecCCCeeeccCCCCCCCCCee-ec
Q 005041 116 LDVTSSQ---------LLVTD-------SDFRDEDF-RKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIF-WD 177 (717)
Q Consensus 116 ~g~~~~~---------~~~~~-------~d~~~~~~-~~~~~~~i~~lL~~g~vPVv~g~d~v~~~~~~~~~~~~~~-~~ 177 (717)
.|-.++. ....+ .+|.-.+. ...+.+.++.+++.|.+|++.. + +-+..|..+ +|
T Consensus 185 ~g~~ar~~s~g~~v~~~f~a~~~~v~d~~~y~~~gei~~vd~d~i~~l~~~G~mp~L~s---l-----a~TaSGqvlnvN 256 (520)
T KOG2436|consen 185 LGTRARPSSSGVRVGNFFPADRNGVLDGEDYGLVGEIKKVDVDRIRHLLDAGSMPLLRS---L-----AATASGQVLNVN 256 (520)
T ss_pred hhceeccccccccccceeecccccccccceeeeecccceechhhhhhhhhCCCchhehh---h-----cccCccceEEee
Confidence 3322211 11111 12211111 1245799999999999999974 2 223355666 99
Q ss_pred chHHHHHHHhhcCCCEEEEecccCccccCCCccccccccccccccchhHHHhcCCCCCcccCChHHHHHHHHHHHHcCCc
Q 005041 178 NDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIP 257 (717)
Q Consensus 178 sD~~A~~lA~~L~Ad~li~lTDV~GV~~~dP~~p~a~~i~~it~~e~~~~~~~gs~~~~~tggM~~Kv~aa~~a~~~gi~ 257 (717)
+|++|.++|.+|+|+++++++|+.-+...+ ++.++.++.++.+..+...+.+.+++++|++++..+..+..-+.+
T Consensus 257 a~~~a~elA~~L~~~kli~l~d~g~~l~e~-----ge~~S~l~l~~e~~~l~k~~qq~~~a~~~v~aV~~~~~~~~p~~~ 331 (520)
T KOG2436|consen 257 ADEVAGELALALGPDKLILLMDKGRILKEN-----GEDISSLILQEEDAGLRKPSQQKNIAANNVKAVKDGIDSSLPRPS 331 (520)
T ss_pred HHHHhhHHHhccCcceeEEecccccccccC-----cccccccccchhHhhhhhhhhhcccccccchhhhhheeeccCcCC
Confidence 999999999999999999999983344553 678889998888877766666678899999998888877333222
Q ss_pred EEEEeCCCcchH-HHHhcCCcceEEEecC
Q 005041 258 VVITSGFAMDSI-IKVLEGKRVGTLFHRD 285 (717)
Q Consensus 258 v~I~~g~~~~~l-~~~~tg~~iGT~i~a~ 285 (717)
-+.+......++ ..+++++..+|.+...
T Consensus 332 s~~i~~~t~~n~~~~~~te~G~~t~~~~g 360 (520)
T KOG2436|consen 332 SYNIAITTQQNLIKELFTEKGAGTLISGG 360 (520)
T ss_pred CCCcceeecccccceeeccCCCCccccCc
Confidence 355555556666 6678877777776553
No 219
>PF05893 LuxC: Acyl-CoA reductase (LuxC); InterPro: IPR008670 This family consists of several bacterial Acyl-CoA reductase (LuxC) proteins. The channelling of fatty acids into the fatty aldehyde substrate for the bacterial bioluminescence reaction is catalysed by a fatty acid reductase multienzyme complex, which channels fatty acids through the thioesterase (LuxD), synthetase (LuxE) and reductase (LuxC) components [].; GO: 0003995 acyl-CoA dehydrogenase activity, 0008218 bioluminescence, 0055114 oxidation-reduction process
Probab=99.29 E-value=1.8e-09 Score=118.91 Aligned_cols=244 Identities=15% Similarity=0.136 Sum_probs=165.7
Q ss_pred EEEeecceeEEEEEcCC-CchhHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEec--C-CC
Q 005041 398 LEKTSCPLGVLLIVFES-RPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVT--S-RE 472 (717)
Q Consensus 398 ~~~~~~PlGVV~~I~p~-~P~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~--~-~~ 472 (717)
.+.++.|.|+|+.|.|- -|.+.++.++.+|.+||..|+|+|+.-|.++..|.+.+.+...+. + ...+.++. + ..
T Consensus 81 ~~~~~~p~g~v~Hi~agNvp~~~~~S~~~~lL~gn~nivK~ss~d~~~~~~l~~~l~~~~~~~~l-~~~i~v~~~~~~d~ 159 (399)
T PF05893_consen 81 GYVRAFPRGLVFHIAAGNVPLVGFYSLVRGLLSGNANIVKLSSRDPFLAPALLRSLAEIDPEHPL-ADSIAVVYWPGGDE 159 (399)
T ss_pred chhhccCCceEEEEcCCCccchHHHHHHHHHHhCCceEEECCCCchhHHHHHHHHHHhhCccchh-hhcEEEEEecCCch
Confidence 46789999999999995 588999999999999999999999999999999999987632221 1 13466663 4 34
Q ss_pred hhhhhhcCCCCccEEEeecCHHHHHHHHhhcC-CCEEEecCCc-ceEEEcCCCCHHHHHHHHHhhcc-CCCccccccceE
Q 005041 473 EIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK-IPVLGHADGI-CHVYVDKSANLDVAKNIVIDAKI-DYPAACNAMETL 549 (717)
Q Consensus 473 ~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a~-~p~~lElGGk-~p~iV~~dADl~~A~~~i~~~~~-~n~g~C~a~~rv 549 (717)
++.+.+.. ..|.|..+||.++.+.+.+... .+-.+.-|-| +-.|++.+++++++++.+..=.+ ++++.|.|++.+
T Consensus 160 ~~~~~~~~--~~D~vv~wGgd~ti~~ir~~~~~~~~~i~fg~k~S~avi~~~~~~~~~a~~~a~Di~~~dQ~aCsSp~~i 237 (399)
T PF05893_consen 160 ELEEALSQ--QADAVVAWGGDETIRAIRQPLPPGARLIEFGPKYSFAVIDAEAELEEAARRLANDIFLFDQQACSSPQVI 237 (399)
T ss_pred HHHHHHHH--HCCEEEEeCCHHHHHHHHHHcCCCCcEeeeCCceEEEEEcCchhHHHHHHHHHHHHHHhhCcccCCCeEE
Confidence 55666653 4899999999999999977543 3344444444 66888888999999888766444 555599999999
Q ss_pred EEcC---cccChhhHHHHHHHHHHcCceEe-cC----ccc-------c-----------ccc--c-----C--CCCcccc
Q 005041 550 LVHK---DLACNGALNELVVELQHEGVGLF-GG----PRA-------S-----------KLL--Q-----I--PETRLFH 594 (717)
Q Consensus 550 ~V~~---~i~d~~f~~~l~~~~~~~~~~~~-g~----~~~-------~-----------~~~--p-----i--~~~~~~~ 594 (717)
||.. .-. ++|.++|.+++++..-.+- +. ... . ..+ + | .+.....
T Consensus 238 fv~~g~~~~~-~~f~~~L~~~L~~~~~~~p~~~~s~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~~~~~ 316 (399)
T PF05893_consen 238 FVETGDGDSV-EEFAERLAEALERAAERYPRGELSIDEAAAISSLRAEAELRYALDGEYRVWSSDDNSWTVIVSPEPPLL 316 (399)
T ss_pred EEECCCcccH-HHHHHHHHHHHHHHHHhCCCcCCCHHHHHHHHHHHHHHHHHHHhcCCcceeecCCCCEEEEECCCcccc
Confidence 9982 334 5888888777765421100 00 000 0 001 0 1 1111111
Q ss_pred ccccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEecCHHHHHHHHh-cCCee
Q 005041 595 HEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLC-QVDSA 646 (717)
Q Consensus 595 eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~I~t~d~~~a~~~~~-~l~~G 646 (717)
..-++=.+.|.++++++|++..+|...-=-|.+++... ++...+++ -...|
T Consensus 317 ~~pl~r~v~v~~v~~~~e~~~~l~~~~~lQTvgi~~~~-~~~~~~~~~l~~~G 368 (399)
T PF05893_consen 317 PSPLNRTVYVVPVDSLEELVPYLRPKRGLQTVGIYPWS-ERLEELARALAAAG 368 (399)
T ss_pred cCCCCCEEEEEEcCCHHHHHHHhhhcCCCeeEEEecCh-hhHHHHHHHHHhcC
Confidence 22234477889999999999999987321577776554 44555555 44444
No 220
>KOG2449 consensus Methylmalonate semialdehyde dehydrogenase [Amino acid transport and metabolism; Carbohydrate transport and metabolism]
Probab=98.79 E-value=2.2e-09 Score=96.24 Aligned_cols=68 Identities=16% Similarity=0.156 Sum_probs=65.5
Q ss_pred CCCccccccccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEecCHHHHHHHHhcCCeeeEEEcCCCC
Q 005041 588 PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTR 655 (717)
Q Consensus 588 ~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~v~iN~~~~ 655 (717)
|.|.++.||+||||+..+.-+++||||.++|.++||-...|||.|.+.++++.+..++|.+.+|.+..
T Consensus 76 P~ms~ykeeI~gpVlv~l~~~tldd~I~Iin~nPygn~t~i~Tsn~atark~~~e~~a~qig~~~~ip 143 (157)
T KOG2449|consen 76 PNMSCYKEEIFGPVLVRLETETLDDAIFIINNNPYGNGTAIFTSNGATARKFCHEPDAGQIGANVPIP 143 (157)
T ss_pred CCcceeHhhhhcceEEEEeecCCCceeEEEecCCCCceeEEEecCcHHhhhhhcCCCccceecccccc
Confidence 67999999999999999999999999999999999999999999999999999999999999998753
No 221
>PF07368 DUF1487: Protein of unknown function (DUF1487); InterPro: IPR009961 This family consists of several uncharacterised proteins from Drosophila melanogaster. The function of this family is unknown.
Probab=98.46 E-value=1.1e-06 Score=86.68 Aligned_cols=172 Identities=15% Similarity=0.102 Sum_probs=114.6
Q ss_pred EEEcCCCCHHHHHHHHHhhccCCCccccccceEEEcCcccChhhHHHHHHHHHHcCc--------------------eEe
Q 005041 517 VYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGV--------------------GLF 576 (717)
Q Consensus 517 ~iV~~dADl~~A~~~i~~~~~~n~g~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~--------------------~~~ 576 (717)
+||++|.||+.|+..++.+. .|.=...+.-.|+|||++. |+|++++..+++.+.- +..
T Consensus 8 MIvfe~GDlnsA~~~L~~sl-~~Pf~~~~VatVlVqEsir-eefi~rvr~~m~pl~~~va~Hpny~rsl~~i~~l~~~~I 85 (215)
T PF07368_consen 8 MIVFEDGDLNSAMHYLLESL-HNPFAPGAVATVLVQESIR-EEFIERVRSRMKPLSPQVANHPNYLRSLKKIKCLNAKTI 85 (215)
T ss_pred EEEEeCCCHHHHHHHHHHHH-hCcccCCcEEEEEEeHHHH-HHHHHHHHHhCccCChhhccCcHHHHHHHHHHhcCCeEE
Confidence 89999999999999999874 3432344666799999999 8999999988875421 111
Q ss_pred -cCcccc--cccc-CCCCcccccccc----CceEEEEEeCCHHHHHHHHHhc--CCCceeEEEecCHHHHHHHHhcCCee
Q 005041 577 -GGPRAS--KLLQ-IPETRLFHHEYN----SMVCTVEIVDDVRAAIDHIHQH--GSAHTDCIVAEDQKVAETFLCQVDSA 646 (717)
Q Consensus 577 -g~~~~~--~~~p-i~~~~~~~eE~F----GPVl~v~~~~~~deAi~~aN~~--~~GL~a~I~t~d~~~a~~~~~~l~~G 646 (717)
++.... .--| +.. .+..-.| .+|+++.+|++..||+++++.. +|+ |.|||++-.+.+..++.++++.
T Consensus 86 ~~~~~~~~~~aSPilV~--d~~h~~fg~~PTgViTlhtFRt~~Ea~~l~~kE~l~f~-SVsiW~ekla~~Yel~~~l~~~ 162 (215)
T PF07368_consen 86 VADFENVPPPASPILVC--DFTHSYFGDGPTGVITLHTFRTPKEAIELCAKETLPFD-SVSIWNEKLASAYELAARLPCD 162 (215)
T ss_pred EecccCCCCCCCCEEEc--CCCHHHcCCCCCeEEEEEccCCHHHHHHHHhcCCCCcc-eEEEeCcHHHHHHHHHHhCCCC
Confidence 110000 0002 100 1122233 3599999999999999999964 666 9999999999999999999999
Q ss_pred eEEEcCCCCC-CCCCcc-CCccc-cccccCcccccccchhhcccEEEEEEecCc
Q 005041 647 AVFHNASTRF-CDGARF-GLGAE-VGISTSRIHARGPVGVEGLLTTRWILRGNG 697 (717)
Q Consensus 647 ~v~iN~~~~~-~~~~pf-G~g~~-~G~~~~~~~~~g~~g~~~ft~~k~v~~~~~ 697 (717)
.++||+.... .+-.++ .-.+. .=+. .++| -+.+.-.-+.|.|+++.+
T Consensus 163 ~f~iNC~~V~L~PI~~~~~~~~~~v~i~-~gyH---YE~l~~~~~~k~IVFP~~ 212 (215)
T PF07368_consen 163 TFYINCFNVDLSPIMPFFAARKNDVLIA-NGYH---YETLTIGGKRKIIVFPIG 212 (215)
T ss_pred EEEEEeccCCchhhhhhhhcCCceEEEE-CCee---EEEEEECCeEEEEEEecc
Confidence 9999986532 222222 21111 1111 1223 245666677888877654
No 222
>PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed
Probab=97.88 E-value=4e-05 Score=95.08 Aligned_cols=103 Identities=13% Similarity=0.192 Sum_probs=76.1
Q ss_pred CCCceEEEeecceeEEEEEcCCCchhHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccccCcCceEEecCCC
Q 005041 393 ADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDTVGEKLIGLVTSRE 472 (717)
Q Consensus 393 ~~~~~~~~~~~PlGVV~~I~p~~P~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~~~~~al~~alP~gvv~vv~~~~ 472 (717)
+.|.....+..|.|+|++|+||+.. .+..++.||++||+||+||++.++ +.+.. +|..+.+.+.
T Consensus 1067 PTGEsN~L~l~~RG~vlcisp~~~~-~l~Qi~AALaaGn~vi~~~~~~~~-------~~~~~-----Lp~~~~~~~~--- 1130 (1208)
T PRK11905 1067 PTGESNLLSLHPRGRVLCVADTEEA-LLRQLAAALATGNVAVVAADSGLA-------AALAD-----LPGLVAARID--- 1130 (1208)
T ss_pred CCCcceeEEecCCceEEEECCcHHH-HHHHHHHHHHhCCEEEEeCCcccH-------HHHHh-----Cccccccccc---
Confidence 3455666788999999999999743 445788899999999999999976 22221 7777666653
Q ss_pred hhhhhhcCCCCccEEEeecCHHHHHHHHhhcC------CCEEEecC
Q 005041 473 EIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK------IPVLGHAD 512 (717)
Q Consensus 473 ~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a~------~p~~lElG 512 (717)
+++.+..|++|+.|.||||+++.+.+.++.. .|++.|..
T Consensus 1131 -~~~~~~~~~~i~~V~~~G~~~~a~~i~~~LA~R~G~Ivpliaet~ 1175 (1208)
T PRK11905 1131 -WTQDWEADDPFAGALLEGDAERARAVRQALAARPGAIVPLIAAEP 1175 (1208)
T ss_pred -cccccccCCcccEEEEeCCHHHHHHHHHHHHhCCCCcceEEecCC
Confidence 2334566778999999999999998865431 45555553
No 223
>PF00815 Histidinol_dh: Histidinol dehydrogenase; InterPro: IPR012131 Histidinol dehydrogenase (HDH) catalyzes the terminal step in the biosynthesis of histidine in bacteria, fungi, and plants, the four-electron oxidation of L-histidinol to histidine. In 4-electron dehydrogenases, a single active site catalyses 2 separate oxidation steps: oxidation of the substrate alcohol to an intermediate aldehyde; and oxidation of the aldehyde to the product acid, in this case His []. The reaction proceeds via a tightly- or covalently-bound inter-mediate, and requires the presence of 2 NAD molecules []. By contrast with most dehydrogenases, the substrate is bound before the NAD coenzyme []. A Cys residue has been implicated in the catalytic mechanism of the second oxidative step []. In bacteria HDH is a single chain polypeptide; in fungi it is the C-terminal domain of a multifunctional enzyme which catalyzes three different steps of histidine biosynthesis; and in plants it is expressed as nuclear encoded protein precursor which is exported to the chloroplast [].; GO: 0004399 histidinol dehydrogenase activity, 0008270 zinc ion binding, 0051287 NAD binding, 0000105 histidine biosynthetic process, 0055114 oxidation-reduction process; PDB: 1KAE_B 1K75_A 1KAH_A 1KAR_B.
Probab=96.38 E-value=0.96 Score=49.79 Aligned_cols=283 Identities=16% Similarity=0.173 Sum_probs=127.8
Q ss_pred HHHHHHHHHHHHhcccccccccccccccCCCceEEEeecceeEEEEEcCC----CchhHHHHHHHHHHhCCE--EEEeCC
Q 005041 365 KISSLAKSIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES----RPDALVQIASLAIRSGNG--LLLKGG 438 (717)
Q Consensus 365 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~----~P~~~~~~~~~ALaaGN~--vVlKps 438 (717)
-++.++++++.|.....+..... ....+|.....++.|+--|++..|- ||-..++.+.||-.||.. |+.-|.
T Consensus 69 Ai~~A~~~I~~fh~~q~~~~~~~--~~~~~G~~~g~~~~Pi~rvG~YVPGG~a~~pStvlM~aiPA~vAGV~~Iv~~TPp 146 (412)
T PF00815_consen 69 AIEQAAENIRAFHEAQLPKKDWE--VETEPGVILGQRYRPIERVGLYVPGGRAPYPSTVLMTAIPAKVAGVKEIVVCTPP 146 (412)
T ss_dssp HHHHHHHHHHHHHHTT-----EE--EEEETTEEEEEEEEE-SEEEEE---SSS--THHHHHHHHHHHHHT-SEEEEEE-S
T ss_pred HHHHHHHHHHHHHHHhcCCCCcE--EEecCCcEEEEEEEEhhheEEEccCCCCCccHHHHHcccchhhcCCCeEEEEcCC
Confidence 45667777777764333211100 0112466667789999999999992 454556778899999864 455554
Q ss_pred cc--hHHHHHHHHHHHHHhcccccCcCceEEec-CCChhhhhhc----CCCCccEEEeecCHHH--HHHHHhh-cCCCEE
Q 005041 439 KE--AMRSNAILHKVITSAIPDTVGEKLIGLVT-SREEIPDLLK----LDDVIDLVIPRGSNKL--VSQIKES-TKIPVL 508 (717)
Q Consensus 439 ~~--tp~t~~~l~~~~~~al~~alP~gvv~vv~-~~~~~~~~l~----~~~~v~~v~fTGs~~~--g~~i~~~-a~~p~~ 508 (717)
.. .+....+.+- + =.|+=.+.. |+...-+.|. +=|+||+|+==|..=| +|..... .++-.
T Consensus 147 ~~~G~i~p~vL~Aa--~-------~~Gv~evy~vGGaqAIAAlAyGTeti~~VDkIvGPGN~yV~~AK~~v~g~V~ID~- 216 (412)
T PF00815_consen 147 PKDGKINPAVLAAA--H-------LAGVDEVYKVGGAQAIAALAYGTETIPKVDKIVGPGNAYVTAAKRLVFGDVGIDM- 216 (412)
T ss_dssp S------HHHHHHH--H-------HTT-SEEEE--HHHHHHHHHH--SSS---SEEE---SHHHHHHHHHHHHS-EES--
T ss_pred CccCCCCHHHHHHH--H-------HcCCCEEEecccHHHHHHHHcCCCCCCceeEEECCCcHHHHHHHHHhcCCcccCC-
Confidence 43 1122212111 1 124444554 5433222222 3378999998888644 3333222 11211
Q ss_pred EecCCcc--eEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccChhhHHHHHHHHHHcCceEecCccccccc
Q 005041 509 GHADGIC--HVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLL 585 (717)
Q Consensus 509 lElGGk~--p~iV~~dADl~~A~~~i~~~~~~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~~~~g~~~~~~~~ 585 (717)
+-|-+ -+|-|++||.+..+..++.-+=+... .| ++|..+ +++.+++.+++++.-..+ ++.
T Consensus 217 --~AGPSEv~ViAD~~A~p~~vAaDLLaQAEHd~~a~~-----vLvt~s---~~la~~V~~~v~~~l~~l---~r~---- 279 (412)
T PF00815_consen 217 --IAGPSEVLVIADETANPEFVAADLLAQAEHDPDAQA-----VLVTTS---EELAEAVEAEVERQLEEL---PRR---- 279 (412)
T ss_dssp -------EEEEEE-TTS-HHHHHHHHHHHHTT-TT-EE-----EEEES----HHHHHHHHHHHHHHHTT----TTH----
T ss_pred --CCCCCceEEEECCCCCHHHHHHHHHHHhccCCCCce-----EEEECC---HHHHHHHHHHHHHHHHhC---Cch----
Confidence 11222 24557789999988888765544322 22 334322 244444444444320000 111
Q ss_pred cCCCCccccccccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEecCHHHHHHHHhc-CCeeeEEEcCCCCC-------C
Q 005041 586 QIPETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQ-VDSAAVFHNASTRF-------C 657 (717)
Q Consensus 586 pi~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~-l~~G~v~iN~~~~~-------~ 657 (717)
++ -++.+. --.++-++|++||++++|.-. +=-..|.++|.. .+..+ -.+|.|++...+.. .
T Consensus 280 -----~i-~~~sl~-~g~ii~~~~l~ea~~~~N~~A-PEHLel~~~~~~---~~~~~i~~AGaiFlG~~tp~a~GDY~aG 348 (412)
T PF00815_consen 280 -----EI-AEKSLE-NGAIIVVDSLEEAIELANEYA-PEHLELQVEDPE---ELLEKIRNAGAIFLGEYTPEALGDYAAG 348 (412)
T ss_dssp -----HH-HHHHHT-T-EEEE-SSHHHHHHHHHHH---SEEEEESTTHH---HHGGG--S-SEEEESTT--HHHHHHTSS
T ss_pred -----HH-HHHHHH-CCeEEEECCHHHHHHHHHHhh-HHHHHHHHcCHH---HHHHHhhccChhhcCCCCCHHHhhhccC
Confidence 01 123333 335778999999999999975 346788899974 44444 56899999976531 1
Q ss_pred CCCccCCccccccccCcccccccchhhcccEEEEEEe
Q 005041 658 DGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILR 694 (717)
Q Consensus 658 ~~~pfG~g~~~G~~~~~~~~~g~~g~~~ft~~k~v~~ 694 (717)
++.-++- +|.. +..|.-+...|...-++..
T Consensus 349 pNHvLPT---~G~A----R~~sgLsv~~FlK~~s~~~ 378 (412)
T PF00815_consen 349 PNHVLPT---GGTA----RFSSGLSVDDFLKRISVQR 378 (412)
T ss_dssp S---------TTGG----GT---S-GGGGEEEEEEEE
T ss_pred CCccCCC---Cccc----cccCCCcHHHccceeeEEE
Confidence 1111221 1221 2235567788877665543
No 224
>cd06572 Histidinol_dh Histidinol dehydrogenase, HisD, E.C 1.1.1.23. Histidinol dehydrogenase catalyzes the last two steps in the L-histidine biosynthesis pathway, which is conserved in bacteria, archaea, fungi, and plants. These last two steps are (i) the NAD-dependent oxidation of L-histidinol to L-histidinaldehyde, and (ii) the NAD-dependent oxidation of L-histidinaldehyde to L-histidine. In most fungi and in the unicellular choanoflagellate Monosiga bevicollis, the HisD domain is fused with units that catalyze the second and third biosynthesis steps in this same pathway.
Probab=96.18 E-value=2 Score=47.10 Aligned_cols=251 Identities=15% Similarity=0.173 Sum_probs=135.8
Q ss_pred HHHHHHHHHHHHhcccccccccccccccCCCceEEEeecceeEEEEEcCC----CchhHHHHHHHHHHhCCE--EEEeCC
Q 005041 365 KISSLAKSIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES----RPDALVQIASLAIRSGNG--LLLKGG 438 (717)
Q Consensus 365 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~----~P~~~~~~~~~ALaaGN~--vVlKps 438 (717)
-++.+.++++.|.....+...... ..+|.....++.|+--|++..|- ||-..++.+.||-.||+. |+.-|.
T Consensus 56 ai~~A~~nI~~fh~~q~~~~~~~~---~~~G~~~g~~~~Pi~~vG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp 132 (390)
T cd06572 56 AIELAAENIRAFHEAQLPKDWEVE---TEPGVVLGQRYRPIERVGLYVPGGTAPYPSTVLMLAIPAKVAGVKEIVVVTPP 132 (390)
T ss_pred HHHHHHHHHHHHHHHhCCCCeEEE---eCCCcEEEEEEEehhEEEEEecCCCCcchHHHHHhhcchhhcCCCeEEEEeCc
Confidence 455666777776543222211111 12466777889999999999992 454556778899999875 444455
Q ss_pred c----chHHHHHHHHHHHHHhcccccCcCceEEec-CCChhhhhhc----CCCCccEEEeecCHHHH--HHHHhh-cCCC
Q 005041 439 K----EAMRSNAILHKVITSAIPDTVGEKLIGLVT-SREEIPDLLK----LDDVIDLVIPRGSNKLV--SQIKES-TKIP 506 (717)
Q Consensus 439 ~----~tp~t~~~l~~~~~~al~~alP~gvv~vv~-~~~~~~~~l~----~~~~v~~v~fTGs~~~g--~~i~~~-a~~p 506 (717)
. -.|.+ +..+++ .|+=.+.. |+...-+.|. +-|.||+|+=-|..=|. |..... .++-
T Consensus 133 ~~~g~i~p~i-L~aa~~----------~Gv~eiy~vGGaQAIAAlAyGTesi~~VDkIvGPGN~yV~~AK~~v~g~V~ID 201 (390)
T cd06572 133 RKDGKINPAI-LAAAKL----------AGVDEIYKVGGAQAIAALAYGTETIPKVDKIVGPGNIYVTAAKRLVSGDVGID 201 (390)
T ss_pred CCCCCCCHHH-HHHHHH----------cCCcEEeccCCHHHHHHHHcCCcCCCCCCEeeCCchHHHHHHHHHhcCCcCcc
Confidence 3 23332 112222 24445554 5543333332 46789999988876543 222111 1111
Q ss_pred EEEecCCcc--eEEEcCCCCHHHHHHHHHhhccCCCccccccceEEEcCcccChhhHHHHHHHHHHcCceEecCcccccc
Q 005041 507 VLGHADGIC--HVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKL 584 (717)
Q Consensus 507 ~~lElGGk~--p~iV~~dADl~~A~~~i~~~~~~n~g~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~~~~g~~~~~~~ 584 (717)
. +-|-+ -+|-|++||.+..+..++.-+=+... ..-++|-.| .++.+++.+++++.-..+ ++.
T Consensus 202 ~---~AGPSEvlIiAD~~A~p~~vAaDLLaQAEH~~~----a~aiLvT~s---~~la~~V~~~v~~ql~~l---~r~--- 265 (390)
T cd06572 202 M---PAGPSEVLVIADETANPEFVAADLLSQAEHDPD----SQAILVTTS---EELAEAVEEEVERQLAEL---PRR--- 265 (390)
T ss_pred C---CCCCceEEEEeCCCCCHHHHHHHHHhhhccCCC----CeEEEEECC---HHHHHHHHHHHHHHHHhC---CcH---
Confidence 1 11222 24446679999988888765433311 112344322 234444444433220000 111
Q ss_pred ccCCCCccccccccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEecCHHHHHHHHhcCCeeeEEEcCCCC
Q 005041 585 LQIPETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTR 655 (717)
Q Consensus 585 ~pi~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~v~iN~~~~ 655 (717)
.+.. +...---.++-++|+|||++++|..- +-..-|.++|... .+.+--.+|.|++-..+.
T Consensus 266 ------~~~~-~~~~~~g~ii~~~~~~eai~~~N~~A-PEHLel~~~~~~~--~l~~i~nAGsiFlG~~tp 326 (390)
T cd06572 266 ------EIAA-KSLLDYGAIILVDDLEEAIELANEYA-PEHLELQTEDPEE--LLEKIRNAGSIFLGPYTP 326 (390)
T ss_pred ------HHHH-HHHHhCCEEEEECCHHHHHHHHHhhc-hhhheeHhcCHHH--HHhhCccceEEeecCCCc
Confidence 0111 11111224567899999999999875 3456788888754 333445789999987553
No 225
>PRK00877 hisD bifunctional histidinal dehydrogenase/ histidinol dehydrogenase; Reviewed
Probab=95.84 E-value=3.5 Score=45.69 Aligned_cols=248 Identities=17% Similarity=0.168 Sum_probs=135.2
Q ss_pred HHHHHHHHHHHHhcccccccccccccccCCCceEEEeecceeEEEEEcCC----CchhHHHHHHHHHHhCCE--EEEeCC
Q 005041 365 KISSLAKSIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES----RPDALVQIASLAIRSGNG--LLLKGG 438 (717)
Q Consensus 365 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~----~P~~~~~~~~~ALaaGN~--vVlKps 438 (717)
-++.+.++++.|-....+..... ...+|...-.++.|+--|++..|. ||-..++.+.||-.||+. |+.-|.
T Consensus 84 ai~~A~~~I~~Fh~~q~~~~~~~---~~~~Gv~~g~~~~Pi~~vG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp 160 (425)
T PRK00877 84 ALEEAAENIRAFHEAQKPESWDV---ETAPGVRLGQRWRPIERVGLYVPGGKAAYPSSVLMNAIPAKVAGVKEIVMVTPP 160 (425)
T ss_pred HHHHHHHHHHHHHHHhCCCCeEE---EecCCeEEEEEEEehHHeEEEccCCCCCchHHHHHhhcchhhcCCCeEEEEeCC
Confidence 45566677777754322211111 012456666788999999999993 555556778899999975 444454
Q ss_pred c---chHHHHHHHHHHHHHhcccccCcCceEEec-CCChhhhhh----cCCCCccEEEeecCHHH--HHHHHhh-cCCCE
Q 005041 439 K---EAMRSNAILHKVITSAIPDTVGEKLIGLVT-SREEIPDLL----KLDDVIDLVIPRGSNKL--VSQIKES-TKIPV 507 (717)
Q Consensus 439 ~---~tp~t~~~l~~~~~~al~~alP~gvv~vv~-~~~~~~~~l----~~~~~v~~v~fTGs~~~--g~~i~~~-a~~p~ 507 (717)
. -.|.+- ..+++ .|+=.+.. |+...-+.| .+=|.||+|+=-|..=| +|..... .++-.
T Consensus 161 ~~g~i~p~vL-~AA~~----------~Gv~eIy~vGGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~g~V~ID~ 229 (425)
T PRK00877 161 PDGEINPAIL-AAAAL----------AGVDEVYKVGGAQAIAALAYGTESIPKVDKIVGPGNIYVTAAKRLVFGVVGIDM 229 (425)
T ss_pred CCCCCCHHHH-HHHHH----------cCCCeeeccCCHHHHHHHHcCCCCCCCCcEEECCCcHHHHHHHHHHcCCcCcCC
Confidence 2 233321 11222 24444444 554332333 24478999998888644 3332211 11211
Q ss_pred EEecCCcce--EEEcCCCCHHHHHHHHHhhccCC--Cc-cccccceEEEcCcccChhhHHHHHHHHHHcCceEecCcccc
Q 005041 508 LGHADGICH--VYVDKSANLDVAKNIVIDAKIDY--PA-ACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRAS 582 (717)
Q Consensus 508 ~lElGGk~p--~iV~~dADl~~A~~~i~~~~~~n--~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~~~~g~~~~~ 582 (717)
+ -|-+= +|-|++||.+..+..++.-+=+. ++ .+.++ .+++. ++..+.+.++++.+ ++.
T Consensus 230 ~---AGPSEvlViAD~~Anp~~vAaDLLaQAEHd~~a~aiLvT~-----s~~la-~~V~~~v~~ql~~l-------~r~- 292 (425)
T PRK00877 230 I---AGPSEILVIADETADPDFVAADLLSQAEHDPDAQSILVTT-----SEELA-EAVAAEVERQLATL-------PRA- 292 (425)
T ss_pred C---CCCceeEEEeCCCCCHHHHHHHHHHHhccCCCCcEEEEEC-----CHHHH-HHHHHHHHHHHHhC-------ChH-
Confidence 1 12222 34456699999888887654443 23 22222 23344 34444444444332 110
Q ss_pred ccccCCCCccccccccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEecCHHHHHHHHhcCCeeeEEEcCCCC
Q 005041 583 KLLQIPETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTR 655 (717)
Q Consensus 583 ~~~pi~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~v~iN~~~~ 655 (717)
.+. .+.+ |-||= |+-++|+|||++++|.-. +--.-|.++|... .+.+--.+|.|++-..+.
T Consensus 293 ~ia----~~sl--~~~g~---iivv~~leeai~~~N~~A-PEHLel~~~~p~~--~l~~I~nAGaiFlG~~tp 353 (425)
T PRK00877 293 EIA----RASL--EGQGA---IILVDDLEEAIELSNAYA-PEHLEIQTEDPRA--LLDRIRNAGAIFLGPYTP 353 (425)
T ss_pred HHH----HHHH--HhCCE---EEEECCHHHHHHHHHhhC-hHheeehhCCHHH--HHhhcCccceeccCCCCc
Confidence 000 0011 22453 467899999999999875 3345688898754 233345789999976543
No 226
>TIGR00069 hisD histidinol dehydrogenase. This model describes a polypeptide sequence catalyzing the final step in histidine biosynthesis, found sometimes as an independent protein and sometimes as a part of a multifunctional protein.
Probab=95.64 E-value=1.6 Score=47.62 Aligned_cols=247 Identities=17% Similarity=0.196 Sum_probs=134.1
Q ss_pred HHHHHHHHHHHHhcccccccccccccccCCCceEEEeecceeEEEEEcCC----CchhHHHHHHHHHHhCCE--EEEeCC
Q 005041 365 KISSLAKSIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES----RPDALVQIASLAIRSGNG--LLLKGG 438 (717)
Q Consensus 365 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~----~P~~~~~~~~~ALaaGN~--vVlKps 438 (717)
-++.+.++++.|-....+..... ...+|.....++.|+--|++..|. ||-..++.+.||-.||+. |+.-|.
T Consensus 52 ai~~A~~~I~~fh~~q~~~~~~~---~~~~Gv~~g~~~~Pi~rvGlYVPGG~a~~pStvLM~aiPAkvAGV~~Iv~~TPp 128 (393)
T TIGR00069 52 ALELAAENIRAFHEAQLPRSWEV---ETEPGVILGQRVRPLERVGLYVPGGRAPYPSTVLMTAIPAKVAGVKEIVVCTPP 128 (393)
T ss_pred HHHHHHHHHHHHHHHhCCCCeEE---ecCCCeEEEEEEEEeheEEEEeCCCCCcchHHHHHhhcchhhcCCCeEEEEeCC
Confidence 34555666666643222211111 013566667789999999999994 454556777899999875 444454
Q ss_pred c----chHHHHHHHHHHHHHhcccccCcCceEEec-CCChhhhhh----cCCCCccEEEeecCHHHH--HHHHh-hcCCC
Q 005041 439 K----EAMRSNAILHKVITSAIPDTVGEKLIGLVT-SREEIPDLL----KLDDVIDLVIPRGSNKLV--SQIKE-STKIP 506 (717)
Q Consensus 439 ~----~tp~t~~~l~~~~~~al~~alP~gvv~vv~-~~~~~~~~l----~~~~~v~~v~fTGs~~~g--~~i~~-~a~~p 506 (717)
. -.|.+- ..+++ .|+=.+.. |+...-+.| .+=|+||+|+=-|..=|. |.... ..++-
T Consensus 129 ~~~g~i~p~iL-~AA~~----------~Gv~eIy~vGGAQAIAAlAyGTesIp~VDkIvGPGN~yV~~AK~~v~g~V~ID 197 (393)
T TIGR00069 129 GKDGKINPAVL-AAAKL----------AGVDEVYKVGGAQAIAALAYGTETVPKVDKIVGPGNIYVTAAKKLVFGDVGID 197 (393)
T ss_pred CcCCCCCHHHH-HHHHH----------cCCCeehhcCCHHHHHHHHcCCCCCCCCcEEECCCcHHHHHHHHHhcCccCcC
Confidence 2 234321 11222 24444444 554332233 234789999988886543 33211 11121
Q ss_pred EEEecCCcce--EEEcCCCCHHHHHHHHHhhccCCCccccccceEEE--cCcccChhhHHHHHHHHHHcCceEecCcccc
Q 005041 507 VLGHADGICH--VYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLV--HKDLACNGALNELVVELQHEGVGLFGGPRAS 582 (717)
Q Consensus 507 ~~lElGGk~p--~iV~~dADl~~A~~~i~~~~~~n~g~C~a~~rv~V--~~~i~d~~f~~~l~~~~~~~~~~~~g~~~~~ 582 (717)
. +-|-+= +|-|++||.+..+..++.-+=+... ..-++| .+++. ++..+.+.+.++.+ ++.
T Consensus 198 ~---~AGPSEvlViAD~~Anp~~iAaDLLaQAEHd~~----a~~iLvT~s~~la-~~V~~~v~~ql~~l-------~r~- 261 (393)
T TIGR00069 198 M---PAGPSEVLVIADETANPEFVAADLLSQAEHDPD----AQAILVTTSEELA-EAVQEEIERQLATL-------PRR- 261 (393)
T ss_pred C---CCCCceEEEEeCCCCCHHHHHHHHHHHhccCCC----CcEEEEECCHHHH-HHHHHHHHHHHHhC-------ChH-
Confidence 1 122222 4446679999988888765444321 111334 23444 34444444444432 111
Q ss_pred ccccCCCCccccc--cccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEecCHHHHHHHHhcCCeeeEEEcCCCC
Q 005041 583 KLLQIPETRLFHH--EYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTR 655 (717)
Q Consensus 583 ~~~pi~~~~~~~e--E~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~v~iN~~~~ 655 (717)
.+.++ +-+|= |+-++|+|||++++|.-.- --.-|.++|... .+.+--.+|.|++-..+.
T Consensus 262 --------~i~~~al~~~g~---ii~v~~l~ea~~~~N~~AP-EHLel~~~~p~~--~l~~I~nAGaiFlG~~tp 322 (393)
T TIGR00069 262 --------EIARKSLEDNGA---IILVDDLEEAIEISNDYAP-EHLELQTKNPEE--LLPKIRNAGSIFLGPYTP 322 (393)
T ss_pred --------HHHHHHHHhCCE---EEEECCHHHHHHHHHhhCh-HhheehhCCHHH--HHhhcCccceeccCCCCc
Confidence 11111 11443 4678999999999998752 345588888753 223335689999976553
No 227
>PLN02926 histidinol dehydrogenase
Probab=95.58 E-value=3.6 Score=45.54 Aligned_cols=248 Identities=15% Similarity=0.108 Sum_probs=136.1
Q ss_pred HHHHHHHHHHHHhcccccccc-cccccccCCCceEEEeecceeEEEEEcCC----CchhHHHHHHHHHHhCCE--EEEeC
Q 005041 365 KISSLAKSIRILADMEEPIGQ-ILKRTELADGLILEKTSCPLGVLLIVFES----RPDALVQIASLAIRSGNG--LLLKG 437 (717)
Q Consensus 365 ~i~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~PlGVV~~I~p~----~P~~~~~~~~~ALaaGN~--vVlKp 437 (717)
-++.+.++++.|.....+... .. ...+|.....++.|+.-|++..|. ||-..++.+.||-.||+. |+.-|
T Consensus 83 ai~~A~~nI~~fh~~q~~~~~~~~---~~~~Gv~~g~~~~Pi~rvG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TP 159 (431)
T PLN02926 83 AFDVAYDNIYAFHLAQKSTEKLEV---ETMPGVRCRRVARPIGAVGLYVPGGTAVLPSTALMLAVPAQIAGCKTVVLATP 159 (431)
T ss_pred HHHHHHHHHHHHHHHhCCCCcceE---ecCCCeEEEEEEechHHeeEeccCCCCCccHHHHHhhcchhhcCCCeEEEEEC
Confidence 455566677776543222111 11 012466667789999999999994 454556778899999875 45555
Q ss_pred Ccc----hHHHHHHHHHHHHHhcccccCcCceEEec-CCChhhhhhc----CCCCccEEEeecCHHH--HHHHHhhcCCC
Q 005041 438 GKE----AMRSNAILHKVITSAIPDTVGEKLIGLVT-SREEIPDLLK----LDDVIDLVIPRGSNKL--VSQIKESTKIP 506 (717)
Q Consensus 438 s~~----tp~t~~~l~~~~~~al~~alP~gvv~vv~-~~~~~~~~l~----~~~~v~~v~fTGs~~~--g~~i~~~a~~p 506 (717)
... .|.+- ..+++ .|+=.+.. |+...-+.|. +=|+||+|+=-|..=| +|... .+.+
T Consensus 160 p~~~g~i~p~iL-~AA~~----------~Gv~eIy~vGGaQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v--~G~~ 226 (431)
T PLN02926 160 PRKDGSICPEVL-YCAKK----------AGVTHILKAGGAQAIAAMAWGTDSCPKVDKIFGPGNQYVTAAKMIL--QNSE 226 (431)
T ss_pred CCcCCCCCHHHH-HHHHH----------cCCCeeeccCCHHHHHHHHcCCCCCCCCCEEECCCcHHHHHHHHHh--hCCC
Confidence 532 33321 11121 24444544 5543322332 3478999999998654 33321 1221
Q ss_pred --EEE-ecCCcce--EEEcCCCCHHHHHHHHHhhccCCCccccccceEEEc--CcccChhhHHHHHHHHHHcCceEecCc
Q 005041 507 --VLG-HADGICH--VYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVH--KDLACNGALNELVVELQHEGVGLFGGP 579 (717)
Q Consensus 507 --~~l-ElGGk~p--~iV~~dADl~~A~~~i~~~~~~n~g~C~a~~rv~V~--~~i~d~~f~~~l~~~~~~~~~~~~g~~ 579 (717)
|-. -+-|-+= +|-|++||.+.++..++.-+=+... ..-++|. +++. ++..+.+.+.++.+ +
T Consensus 227 ~~VgID~~AGPSEvlIiAD~tA~p~~vAaDLLaQAEHdp~----a~aiLvT~s~~la-~~V~~~v~~ql~~l-------~ 294 (431)
T PLN02926 227 AMVSIDMPAGPSEVLVIADKTANPVHVAADLLSQAEHGPD----SQVVLVAVGDVDL-DAIEEEVEKQCQSL-------P 294 (431)
T ss_pred CccccCCCCCCceeEEEeCCCCCHHHHHHHHHHHhccCCC----CcEEEEECCHHHH-HHHHHHHHHHHHhC-------C
Confidence 111 1123322 3445669999988888765443321 1113342 2344 34444444444432 1
Q ss_pred cccccccCCCCccccccccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEecCHHHHHHHHhcCCeeeEEEcCCC
Q 005041 580 RASKLLQIPETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNAST 654 (717)
Q Consensus 580 ~~~~~~pi~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~v~iN~~~ 654 (717)
+. ++. ++.+.- -.|+-++|+|||++++|.-- +--.-|.++|.... +.+--.+|.|++...+
T Consensus 295 r~---------~i~-~~sl~~-g~iivv~~l~ea~~~~N~~A-PEHLei~~~~~~~~--l~~i~nAGaiFlG~~s 355 (431)
T PLN02926 295 RG---------EIA-SKALGH-SFIVVARDMAEAISFSNLYA-PEHLIVNVEDAESW--LDKIDNAGSVFLGRWT 355 (431)
T ss_pred hH---------HHH-HHHHHC-CEEEEECCHHHHHHHHHhhC-hHhheehhcCHHHH--HhhcCccceeccCCCC
Confidence 11 111 222233 45688999999999999865 33455888887542 3334568999997654
No 228
>PRK13770 histidinol dehydrogenase; Provisional
Probab=95.57 E-value=4.3 Score=44.74 Aligned_cols=243 Identities=11% Similarity=0.098 Sum_probs=134.5
Q ss_pred HHHHHHHHHHHHhcccccccccccccccCCCceEEEeecceeEEEEEcCC----CchhHHHHHHHHHHhCCEEEE--eCC
Q 005041 365 KISSLAKSIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES----RPDALVQIASLAIRSGNGLLL--KGG 438 (717)
Q Consensus 365 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~----~P~~~~~~~~~ALaaGN~vVl--Kps 438 (717)
-++.+.++++.|.....+.. +....+.....++.|+--|++..|- ||-..++.+.||-.||+.=|+ -|.
T Consensus 76 ai~~A~~nI~~fh~~q~~~~-----~~~~~gv~~g~~~~Pi~rvGlYVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp 150 (416)
T PRK13770 76 ALQQSYERIKAYQESIKQTN-----QQLEESVECYEIYHPLESVGIYVPGGKASYPSTVLMTATLAQVAGVENIVVVTPP 150 (416)
T ss_pred HHHHHHHHHHHHHHHhCCCC-----eEecCCcEEEEEEeeeeeeEEEccCCCCCccHHHHHhhccHhhcCCCeEEEEeCc
Confidence 45566677777653222211 1112455566788999999999993 554556778899999986444 444
Q ss_pred cc---hHHHHHHHHHHHHHhcccccCcCceEEec-CCChhhhhh----cCCCCccEEEeecCHHHH--HHHHh-hcCCCE
Q 005041 439 KE---AMRSNAILHKVITSAIPDTVGEKLIGLVT-SREEIPDLL----KLDDVIDLVIPRGSNKLV--SQIKE-STKIPV 507 (717)
Q Consensus 439 ~~---tp~t~~~l~~~~~~al~~alP~gvv~vv~-~~~~~~~~l----~~~~~v~~v~fTGs~~~g--~~i~~-~a~~p~ 507 (717)
.. .|.+- ..+++ .|+=.+.. |+...-+.| .+=|+||+|+==|..=|. |.... ..++-.
T Consensus 151 ~~~~i~p~iL-~Aa~~----------~Gv~eIy~iGGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~g~V~ID~ 219 (416)
T PRK13770 151 QPNGVSQEVL-AACYI----------TQVNQVFQVGGAQSIAALTYGTETIPKVDKIVGPGNQFVAYAKKYLFGQVGIDQ 219 (416)
T ss_pred CCCCCCHHHH-HHHHH----------cCCCeeeccCCHHHHHHHHcCCCCCCCCcEEECCCcHHHHHHHHHhcCCcCcCC
Confidence 32 33321 11222 24444444 544322223 235789999988876443 32211 111221
Q ss_pred EEecCCcc--eEEEcCCCCHHHHHHHHHhhccCC--Cc-cccccceEEEcCcccChhhHHHHHHHHHHcCceEecCcccc
Q 005041 508 LGHADGIC--HVYVDKSANLDVAKNIVIDAKIDY--PA-ACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRAS 582 (717)
Q Consensus 508 ~lElGGk~--p~iV~~dADl~~A~~~i~~~~~~n--~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~~~~g~~~~~ 582 (717)
+ -|-+ -+|-|++||.+..+..++.-+=+. ++ .+.++ .+++. ++..+.+.+.++.+ ++.
T Consensus 220 ~---AGPSEvlViAD~~Anp~~iAaDLLaQAEHd~~a~~iLvT~-----s~~la-~~V~~ev~~ql~~l-------pr~- 282 (416)
T PRK13770 220 I---AGPTEIALIIDETADLDAIVYDVFAQAEHDELARTYVISE-----DAQVL-KDLESRIAKALPNV-------DRY- 282 (416)
T ss_pred C---CCCceeEEEecCCCCHHHHHHHHHHHhccCCCCcEEEEeC-----CHHHH-HHHHHHHHHHHHhC-------ChH-
Confidence 1 1222 244466799999888887654433 33 33333 23444 34444444444433 110
Q ss_pred ccccCCCCccccc--cccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEecCHHHHHHHHhc-CCeeeEEEcCCCC
Q 005041 583 KLLQIPETRLFHH--EYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQ-VDSAAVFHNASTR 655 (717)
Q Consensus 583 ~~~pi~~~~~~~e--E~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~-l~~G~v~iN~~~~ 655 (717)
.+.++ |-|| .++-++|+|||++++|.-.- =-.-|.++|... +..+ -.+|.|++...+.
T Consensus 283 --------~i~~~al~~~g---~ii~v~~~eeai~~~N~~AP-EHLel~~~~~~~---~l~~i~nAGaiFlG~~sp 343 (416)
T PRK13770 283 --------DIVSKSIANQH---YLIHASNFDEACHVMNTIAP-EHASIQTVNPQP---YIEKVKYVGALFIGHYSP 343 (416)
T ss_pred --------HHHHHHHHhCC---EEEEECCHHHHHHHHHhhCh-HhheehhCCHHH---HHhhCCEeceeccCCCCc
Confidence 01111 2243 34678999999999998753 244588888753 4444 4689999976553
No 229
>PRK12447 histidinol dehydrogenase; Reviewed
Probab=95.41 E-value=5.2 Score=44.27 Aligned_cols=249 Identities=16% Similarity=0.147 Sum_probs=133.6
Q ss_pred HHHHHHHHHHHHhcccccccccccccccCCCceEEEeecceeEEEEEcCC----CchhHHHHHHHHHHhCCE--EEEeCC
Q 005041 365 KISSLAKSIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES----RPDALVQIASLAIRSGNG--LLLKGG 438 (717)
Q Consensus 365 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~----~P~~~~~~~~~ALaaGN~--vVlKps 438 (717)
-+..+.++++.|-....+....... ...+|.....++.|+--|++..|- ||-..++.+.||-.||+. |+.-|.
T Consensus 77 ai~~A~~nI~~fh~~q~~~~~~~~~-~~~~Gv~~g~~~~Pl~rvG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp 155 (426)
T PRK12447 77 DIRFAQDQVRRFAEAQRDSLQDLEV-ETLPGVILGHRNIPVNSVGCYVPGGRYPLVASAHMSVLTAKVAGVKRVIACTPP 155 (426)
T ss_pred HHHHHHHHHHHHHHHhcCCCCceEE-ecCCCeEEEEEEeehheEEEEeCCCCCcchHHHHHhhcchhhcCCCeEEEEeCC
Confidence 4556667777765322221100100 012456666789999999999992 454556778899999975 444454
Q ss_pred cc---hHHHHHHHHHHHHHhcccccCcCceEEec-CCChhhhhh----cCCCCccEEEeecCHHHH--HHHHh-hcCCCE
Q 005041 439 KE---AMRSNAILHKVITSAIPDTVGEKLIGLVT-SREEIPDLL----KLDDVIDLVIPRGSNKLV--SQIKE-STKIPV 507 (717)
Q Consensus 439 ~~---tp~t~~~l~~~~~~al~~alP~gvv~vv~-~~~~~~~~l----~~~~~v~~v~fTGs~~~g--~~i~~-~a~~p~ 507 (717)
.. .|.+- ..+++ .|+=.+.. |+...-+.| .+=|.||+|+=-|..=|. |.... ..++-.
T Consensus 156 ~~~~i~p~iL-~Aa~~----------~Gv~eIy~vGGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~g~V~ID~ 224 (426)
T PRK12447 156 FPGEPPPAIV-AAMHL----------AGADEIYVLGGVQAVAAMAYGTETIKPVDMLVGPGNAYVAEAKRQLFGRVGIDL 224 (426)
T ss_pred CCCCCCHHHH-HHHHH----------cCCCeehhcCCHHHHHHHHcCCCCCCCCcEEECCCcHHHHHHHHHhcCccCcCC
Confidence 32 33321 11121 24444444 554322223 234789999988886543 33211 111221
Q ss_pred EEecCCcce--EEEcCCCCHHHHHHHHHhhccCCCccccccceEEE--cCcccChhhHHHHHHHHHHcCceEecCccccc
Q 005041 508 LGHADGICH--VYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLV--HKDLACNGALNELVVELQHEGVGLFGGPRASK 583 (717)
Q Consensus 508 ~lElGGk~p--~iV~~dADl~~A~~~i~~~~~~n~g~C~a~~rv~V--~~~i~d~~f~~~l~~~~~~~~~~~~g~~~~~~ 583 (717)
+ -|-+= +|-|++||.+..+..++.-+=+... ..-++| .+++. ++..+.+.+.++.+ ++. .
T Consensus 225 ~---AGPSEvlViAD~~Anp~~vAaDLLaQAEHd~~----a~~iLvT~s~~la-~~V~~~v~~ql~~l-------~r~-~ 288 (426)
T PRK12447 225 F---AGPTETLVIADDTADPELVATDLLGQAEHGPN----SPAVLITTSRKLA-EEVLAEIERLLAIL-------PTA-D 288 (426)
T ss_pred C---CCCceeEEEeCCCCCHHHHHHHHHHHhccCCC----CceEEEECCHHHH-HHHHHHHHHHHHhC-------CHH-H
Confidence 1 12222 3446679999988888765444321 111333 23444 34444444444432 111 0
Q ss_pred cccCCCCccccccccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEecCHHHHHHHHhc-CCeeeEEEcCCC
Q 005041 584 LLQIPETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQ-VDSAAVFHNAST 654 (717)
Q Consensus 584 ~~pi~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~-l~~G~v~iN~~~ 654 (717)
.. ...| |-+|= |+-++|+|||++++|.-.- =-..|.++|.. .+..+ -.+|.|++-..+
T Consensus 289 i~----~~sl--~~~g~---ii~v~~l~ea~~~~N~~AP-EHLel~~~~~~---~~l~~i~nAGaiFlG~~s 347 (426)
T PRK12447 289 VA----SAAW--RDYGE---VILCDDLEEMVAEADRYAS-EHVQVMTEDPD---WFLENMTNYGALFLGERT 347 (426)
T ss_pred HH----HHHH--HhCCE---EEEECCHHHHHHHHHhhCh-HheeehhCCHH---HHHhhcCccceeccCCCC
Confidence 00 0011 22443 4678999999999998753 34558888874 34443 568999997654
No 230
>COG0141 HisD Histidinol dehydrogenase [Amino acid transport and metabolism]
Probab=94.69 E-value=1.8 Score=47.45 Aligned_cols=250 Identities=14% Similarity=0.185 Sum_probs=136.8
Q ss_pred HHHHHHHHHHHHhcccccccccccccccCCCceEEEeecceeEEEEEcC----CCchhHHHHHHHHHHhCCE--EEEeCC
Q 005041 365 KISSLAKSIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFE----SRPDALVQIASLAIRSGNG--LLLKGG 438 (717)
Q Consensus 365 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p----~~P~~~~~~~~~ALaaGN~--vVlKps 438 (717)
-++.++++++.|-....+.... ....+|.....++.|+--|++..| .||-..++...||-.||+- |+.-|.
T Consensus 80 ai~~A~~~I~~fH~~Q~p~~~~---~~~~~Gv~~g~~~~Pi~~VGlYVPGG~A~ypStvLM~avPAkvAGv~~Iv~~tPp 156 (425)
T COG0141 80 ALEVAAENIEAFHEAQLPKDWL---VETEPGVVLGQRWRPIERVGLYVPGGKAAYPSTVLMNAVPAKVAGVEEIVVVTPP 156 (425)
T ss_pred HHHHHHHHHHHHHHhhCCCccc---eeccCCcEEEEEEEEhhheEEEccCCCcCChHHHHHhhccHhhcCCceEEEECCC
Confidence 3555666676664322221111 112356677788999999999999 2676666777899999985 444454
Q ss_pred cc---hHHHHHHHHHHHHHhcccccCcCceEEec-CCChhhhhhcCC----CCccEEEeecCHHHH--HHHHhhcCCCEE
Q 005041 439 KE---AMRSNAILHKVITSAIPDTVGEKLIGLVT-SREEIPDLLKLD----DVIDLVIPRGSNKLV--SQIKESTKIPVL 508 (717)
Q Consensus 439 ~~---tp~t~~~l~~~~~~al~~alP~gvv~vv~-~~~~~~~~l~~~----~~v~~v~fTGs~~~g--~~i~~~a~~p~~ 508 (717)
.. .|.+ +..++++ |+=.+.. |+...-++|.-. |.||+|+==|..=|. |..... ..-+=
T Consensus 157 ~~~gv~p~i-L~AA~~~----------Gv~eIy~vGGAQAIAAlAYGTetV~~VdkIvGPGN~yVtaAKr~v~g-~V~ID 224 (425)
T COG0141 157 PKDGVNPEI-LAAARLA----------GVDEVYKVGGAQAIAALAYGTETVPKVDKIVGPGNAYVTAAKRLVSG-VVGID 224 (425)
T ss_pred CCCCCCHHH-HHHHHHh----------CcHHHHHccCHHHHHHHHccCCcCCccCeeeCCCcHHHHHHHHHhhC-CcccC
Confidence 43 3432 2222222 2222333 554433344322 679999988886543 322221 11111
Q ss_pred EecCCcce-EEEcCCCCHHHHHHHHHhhccCCCccccccceEEEcCcccChhhHHHHHHHHHHcCceEecCccccccccC
Q 005041 509 GHADGICH-VYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLQI 587 (717)
Q Consensus 509 lElGGk~p-~iV~~dADl~~A~~~i~~~~~~n~g~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~~~~g~~~~~~~~pi 587 (717)
+..|=..- +|-|++||.+..+..++.-+=+... .+-++|-.| ++|.++..+++.+.-..+ ++.
T Consensus 225 ~~AGPSEvlViAD~ta~p~~vA~DLLsQAEHd~~----a~aiLvT~s---~~la~~v~~~v~~~l~~l---~~~------ 288 (425)
T COG0141 225 MIAGPSEVLVIADETANPDFVAADLLSQAEHDPD----AQAILVTDS---EELAEAVEAAVERQLETL---PRA------ 288 (425)
T ss_pred CCCCCceEEEEeCCCCCHHHHHHHHHHHhhcCCC----ceEEEEeCc---HHHHHHHHHHHHHHHHhc---cHH------
Confidence 11222222 3446669999998888765544321 112455432 345555544444320000 110
Q ss_pred CCCccccc--cccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEecCHHHHHHHHhc-CCeeeEEEcCCCC
Q 005041 588 PETRLFHH--EYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQ-VDSAAVFHNASTR 655 (717)
Q Consensus 588 ~~~~~~~e--E~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~-l~~G~v~iN~~~~ 655 (717)
++..+ +-|| .|+.++|+|||++++|... +--.-|.++|... +..+ -.+|.|++...++
T Consensus 289 ---ei~~~~l~~~g---~iilv~~l~ea~~~~N~~A-PEHLei~~~~p~~---~l~~I~nAGsIFlG~~sP 349 (425)
T COG0141 289 ---EIARKALENYG---AIILVDDLDEAVEISNEYA-PEHLELQTENPRE---LLGKIRNAGSIFLGHYSP 349 (425)
T ss_pred ---HHHHHHHHhCC---eEEEECCHHHHHHHHHhhC-hHhhhhhhcCHHH---HHHHhcccceeeecCCCC
Confidence 01111 1233 4677899999999999875 4456788998754 3333 4689999998654
No 231
>PRK13769 histidinol dehydrogenase; Provisional
Probab=86.08 E-value=57 Score=35.63 Aligned_cols=238 Identities=14% Similarity=0.041 Sum_probs=128.1
Q ss_pred HHHHHHHHHHHHhcccccccccccccccCCCceEEEeecceeEEEEEcCC-CchhHHHHHHHHHHhCCEEEEe--CCc-c
Q 005041 365 KISSLAKSIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPDALVQIASLAIRSGNGLLLK--GGK-E 440 (717)
Q Consensus 365 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~~~~~~~~~ALaaGN~vVlK--ps~-~ 440 (717)
-+..+.++++.|.....+..... ..+|.....++.|+--|++..|. +|-..++.+.||-.||+.=|+= |.. -
T Consensus 58 ai~~a~~~I~~fh~~q~~~~~~~----~~~Gv~~g~~~~Pi~rvG~YVPa~~pStvLM~~iPAkvAGV~~Iv~~TPp~~i 133 (368)
T PRK13769 58 AALEAAKSLEALYSRLKPPEAVD----FYGGVLRSVFWKPVRRAALYVPARYVSTLVMLAVPARAAGVEEIYVVTPPRGV 133 (368)
T ss_pred HHHHHHHHHHHHHHHhCCCCeEe----cCCCeEEEEEEeeeeeeEEEeccchHHHHHHhhccHhhcCCCeEEEeCCCCCC
Confidence 34555666666653222211111 12566667789999999999995 4545567788999999864443 432 2
Q ss_pred hHHHHHHHHHHHHHhcccccCcCceEEec-CCChhhhhhcCCCCccEEEeecCHHHH--HHHHh-hcCCCEEEecCCcce
Q 005041 441 AMRSNAILHKVITSAIPDTVGEKLIGLVT-SREEIPDLLKLDDVIDLVIPRGSNKLV--SQIKE-STKIPVLGHADGICH 516 (717)
Q Consensus 441 tp~t~~~l~~~~~~al~~alP~gvv~vv~-~~~~~~~~l~~~~~v~~v~fTGs~~~g--~~i~~-~a~~p~~lElGGk~p 516 (717)
.|.+ +..+++ .|+=.+.. |+...-+.+..--+||+|+=-|..=|. |.... ..++-.. -|=.--
T Consensus 134 ~p~v-L~aa~~----------~Gv~eIy~vGGAQAIAa~a~gt~VDkIvGPGN~yV~~AK~~v~g~V~ID~~--AGPSEv 200 (368)
T PRK13769 134 TGEL-LAVAKE----------LGVKGVLAIGGPHGLAYAVFHMGVDMVAGPGGLYVQAAKYVLSQYVGIDGI--EGPTEL 200 (368)
T ss_pred CHHH-HHHHHH----------cCCCeeecccCHHHHHHHhcCCCcCEEECCCcHHHHHHHHHHhCCcCCCCc--CCCcce
Confidence 3322 111122 24444554 554332344433479999999986543 33211 1112211 122233
Q ss_pred EEEcCCCCHHHHHHHHHhhccCCCccccccceEEEcCcccChhhHHHHHHHHHHcCceEecCccccccccCCCCcccccc
Q 005041 517 VYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLQIPETRLFHHE 596 (717)
Q Consensus 517 ~iV~~dADl~~A~~~i~~~~~~n~g~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~~~~g~~~~~~~~pi~~~~~~~eE 596 (717)
+|+-++||.+..+..++.-+=+... ..-++|..+ .++.+++.+++++.-. +
T Consensus 201 lViAD~a~p~~vAaDLLaQAEH~~~----a~~iLvT~s---~~la~~V~~~v~~~~~---------------------~- 251 (368)
T PRK13769 201 VVYAEGVPPEVAVRGALAQLEHGPT----SFAYLLSTD---AELLKAAEEIYRRERT---------------------S- 251 (368)
T ss_pred EEEcCCCCHHHHHHHHHHHhhcCCC----CcEEEEECC---HHHHHHHHHHHHHHHH---------------------h-
Confidence 5666669999888887754433211 111334322 2455555555544200 0
Q ss_pred ccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEecCHHHHHHHHhcCCeeeEEEcCCC
Q 005041 597 YNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNAST 654 (717)
Q Consensus 597 ~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~v~iN~~~ 654 (717)
..|- ..|+-++|+|||++++|.-.- --..|.+.+ . .+.+--.+|.|+++.+.
T Consensus 252 ~~~~-~~iivv~~leeai~~~N~~AP-EHLel~~~~-~---~~~~i~nAGsiFl~~p~ 303 (368)
T PRK13769 252 SMGP-LEVRKVAGVEEAVRFIDEIAP-EHLEVWGRR-E---VAYRVRNVGAVSVNMPS 303 (368)
T ss_pred cCCC-CeEEEECCHHHHHHHHHhhCh-HheEeeCcH-H---HHhhCCccCChhcCCch
Confidence 1221 346789999999999998642 223344422 2 22234568999996543
No 232
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=85.88 E-value=2.9 Score=39.63 Aligned_cols=71 Identities=24% Similarity=0.288 Sum_probs=43.7
Q ss_pred EEecccCccccCCCccccccccccccccchhHHHhcCCCCCcccCChHHHHHHHHHHHHcCCcEEEEeCCCcchHHHHhc
Q 005041 195 VLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLE 274 (717)
Q Consensus 195 i~lTDV~GV~~~dP~~p~a~~i~~it~~e~~~~~~~gs~~~~~tggM~~Kv~aa~~a~~~gi~v~I~~g~~~~~l~~~~t 274 (717)
++++|||||+++ ++++-.-.-+|+. .+ ++..|+--| ...+.|+++-|++|++...+..-..
T Consensus 10 Lli~DVDGvLTD------G~ly~~~~Gee~K---aF-----nv~DG~Gik-----~l~~~Gi~vAIITGr~s~ive~Ra~ 70 (170)
T COG1778 10 LLILDVDGVLTD------GKLYYDENGEEIK---AF-----NVRDGHGIK-----LLLKSGIKVAIITGRDSPIVEKRAK 70 (170)
T ss_pred EEEEeccceeec------CeEEEcCCCceee---ee-----eccCcHHHH-----HHHHcCCeEEEEeCCCCHHHHHHHH
Confidence 466899999997 5443332223332 22 345665544 5677899999999999887755544
Q ss_pred CCcceEEEec
Q 005041 275 GKRVGTLFHR 284 (717)
Q Consensus 275 g~~iGT~i~a 284 (717)
.-.+-.+...
T Consensus 71 ~LGI~~~~qG 80 (170)
T COG1778 71 DLGIKHLYQG 80 (170)
T ss_pred HcCCceeeec
Confidence 4334433333
No 233
>PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed
Probab=82.76 E-value=2.9 Score=53.12 Aligned_cols=93 Identities=13% Similarity=0.122 Sum_probs=63.5
Q ss_pred CCceEEEeecceeEEEEEcCCCchhHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccccCcCceEEecCCCh
Q 005041 394 DGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDTVGEKLIGLVTSREE 473 (717)
Q Consensus 394 ~~~~~~~~~~PlGVV~~I~p~~P~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~~~~~al~~alP~gvv~vv~~~~~ 473 (717)
.|......-.|.|+|+++.+.-. -.+..++.+|++||.+|+..++.. .+++. .||+.|.+.+.-..
T Consensus 1177 TGE~N~l~l~pRg~vLcl~~~~~-~~~~Ql~Aala~Gn~~v~~~~~~~-------~~~~~-----~Lp~~v~~~v~~~~- 1242 (1318)
T PRK11809 1177 TGERNTYTLLPRERVLCLADTEQ-DALTQLAAVLAVGSQALWPDDALH-------RALVA-----ALPAAVQARIQLAK- 1242 (1318)
T ss_pred CCCcceeeccCCCcEEEeCCCHH-HHHHHHHHHHHhCCEEEEeCCchh-------HHHHH-----hccHHHHhHhhhcc-
Confidence 34455567799999999987543 245677889999999998755542 22332 29999988774211
Q ss_pred hhhhhcCCCCccEEEeecCHHHHHHHHhh
Q 005041 474 IPDLLKLDDVIDLVIPRGSNKLVSQIKES 502 (717)
Q Consensus 474 ~~~~l~~~~~v~~v~fTGs~~~g~~i~~~ 502 (717)
...+ ....++.|.|-|.....+.+.++
T Consensus 1243 -~~~~-~~~~~~avl~~G~~~~l~~~~~~ 1269 (1318)
T PRK11809 1243 -DWQL-ADQPFDAVLFHGDSDQLRALCEQ 1269 (1318)
T ss_pred -cccc-ccCCccEEEEeCCHHHHHHHHHH
Confidence 1222 23569999999999977766544
No 234
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=48.37 E-value=35 Score=33.06 Aligned_cols=64 Identities=16% Similarity=0.227 Sum_probs=38.0
Q ss_pred EEecccCccccCCC--ccccccccccccccchhHHHhcCCCCCcccCChHHHHHHHHHHHHcCCcEEEEeCCCcchHHHH
Q 005041 195 VLLSDVEGLYSGPP--SEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKV 272 (717)
Q Consensus 195 i~lTDV~GV~~~dP--~~p~a~~i~~it~~e~~~~~~~gs~~~~~tggM~~Kv~aa~~a~~~gi~v~I~~g~~~~~l~~~ 272 (717)
.+++|+|||+++.- -++++......+. ..||. ...+.+.|+++.|+++.....+...
T Consensus 9 ~~v~d~dGv~tdg~~~~~~~g~~~~~~~~----------------~D~~~-----~~~L~~~Gi~laIiT~k~~~~~~~~ 67 (169)
T TIGR02726 9 LVILDVDGVMTDGRIVINDEGIESRNFDI----------------KDGMG-----VIVLQLCGIDVAIITSKKSGAVRHR 67 (169)
T ss_pred EEEEeCceeeECCeEEEcCCCcEEEEEec----------------chHHH-----HHHHHHCCCEEEEEECCCcHHHHHH
Confidence 46789999999842 1334433333322 33332 3345567999889988877666555
Q ss_pred hcCCcce
Q 005041 273 LEGKRVG 279 (717)
Q Consensus 273 ~tg~~iG 279 (717)
+..-.+.
T Consensus 68 l~~lgi~ 74 (169)
T TIGR02726 68 AEELKIK 74 (169)
T ss_pred HHHCCCc
Confidence 5543333
No 235
>PF10686 DUF2493: Protein of unknown function (DUF2493); InterPro: IPR019627 This entry is represented by Mycobacteriophage D29, Gp61. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. Members of this family are mainly Proteobacteria. The function is not known.
Probab=41.47 E-value=62 Score=26.52 Aligned_cols=44 Identities=23% Similarity=0.308 Sum_probs=28.9
Q ss_pred CeEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecCh-hHhhH
Q 005041 17 KRVVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGA-VGVGR 69 (717)
Q Consensus 17 ~~iVvKiGGs~l~~~~~~~~~~~l~~l~~~Ia~l~~~G~~vviVhGGg-~~~~~ 69 (717)
.+.|+=-||.-.+|. +.+-+.|.++++.--.++|||||. ...+.
T Consensus 3 g~rVli~GgR~~~D~---------~~i~~~Ld~~~~~~~~~~lvhGga~~GaD~ 47 (71)
T PF10686_consen 3 GMRVLITGGRDWTDH---------ELIWAALDKVHARHPDMVLVHGGAPKGADR 47 (71)
T ss_pred CCEEEEEECCccccH---------HHHHHHHHHHHHhCCCEEEEECCCCCCHHH
Confidence 355667788888874 345555555555444688999998 44444
No 236
>PF13376 OmdA: Bacteriocin-protection, YdeI or OmpD-Associated
Probab=39.64 E-value=41 Score=26.70 Aligned_cols=35 Identities=14% Similarity=0.115 Sum_probs=31.3
Q ss_pred HhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 005041 292 QVGAREMAVAARESSRRLQALQSQDRRKILLDVAD 326 (717)
Q Consensus 292 ~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~ 326 (717)
++|+..+++.-..|..-|..++...|..++..+..
T Consensus 7 P~dl~~aL~~~p~a~~~f~~l~~~~rr~~i~wi~~ 41 (63)
T PF13376_consen 7 PEDLEAALEANPEAKEFFESLTPSYRREYIRWINS 41 (63)
T ss_pred CHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHH
Confidence 68999999999999999999999999999977653
No 237
>PF03437 BtpA: BtpA family; InterPro: IPR005137 Photosystem I (PSI) is a large protein complex embedded within the photosynthetic thylakoid membrane. It consists of 11 subunits, ~100 chlorophyll a molecules, 2 phylloquinones, and 3 Fe4S4-clusters. The three dimensional structure of the PSI complex has been resolved at 2.5 A [], which allows the precise localisation of each cofactor. PSI together with photosystem II (PSII) catalyses the light-induced steps in oxygenic photosynthesis - a process found in cyanobacteria, eukaryotic algae (e.g. red algae, green algae) and higher plants. To date, three thylakoid proteins involved in the stable accumulation of PSI have been identified: BtpA [], Ycf3 [, ], and Ycf4 (IPR003359 from INTERPRO) []. Because translation of the psaA and psaB mRNAs encoding the two reaction centre polypeptides, of PSI and PSII respectively, is not affected in mutant strains lacking functional ycf3 and ycf4, the products of these two genes appear to act at a post-translational step of PSI biosynthesis. These gene products are therefore involved either in the stabilisation or in the assembly of the PSI complex. However, their exact roles remain unknown. The BtpA protein appears to act at the level of PSI stabilisation []. It is an extrinsic membrane protein located on the cytoplasmic side of the thylakoid membrane [, ]. Homologs of BtpA are found in the crenarchaeota and euryarchaeota, where their function remains unknown. The Ycf4 protein is firmly associated with the thylakoid membrane, presumably through a transmembrane domain []. Ycf4 co-fractionates with a protein complex larger than PSI upon sucrose density gradient centrifugation of solubilised thylakoids []. The Ycf3 protein is loosely associated with the thylakoid membrane and can be released from the membrane with sodium carbonate. This suggests that Ycf3 is not part of a stable complex and that it probably interacts transiently with its partners []. Ycf3 contains a number of tetratrico peptide repeats (TPR, IPR001440 from INTERPRO); TPR is a structural motif present in a wide range of proteins, which mediates protein-protein interactions.
Probab=35.59 E-value=98 Score=32.17 Aligned_cols=99 Identities=24% Similarity=0.303 Sum_probs=56.5
Q ss_pred ecchHHHHH-HHhhcCCCEEEEecccCccccCCCccccccccccccccchh-HHHh-cCCCCCcccCCh------HHHHH
Q 005041 176 WDNDSLAGL-LALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQ-AEIT-FGDKSRVGRGGM------TAKVN 246 (717)
Q Consensus 176 ~~sD~~A~~-lA~~L~Ad~li~lTDV~GV~~~dP~~p~a~~i~~it~~e~~-~~~~-~gs~~~~~tggM------~~Kv~ 246 (717)
++++..... .=.+|+++ +-+++||.-=... | +..-+.+|.. +.+. .+...-.+||.+ ..|++
T Consensus 123 ~~~~a~e~~r~R~~l~a~-v~ilaDV~~kh~~-~-------l~~~~~~~~~~~a~~~~~aDaviVtG~~TG~~~~~~~l~ 193 (254)
T PF03437_consen 123 IEGCAGELLRYRKRLGAD-VKILADVHVKHSS-P-------LATRDLEEAAKDAVERGGADAVIVTGKATGEPPDPEKLK 193 (254)
T ss_pred ccccHHHHHHHHHHcCCC-eEEEeeechhhcc-c-------CCCCCHHHHHHHHHHhcCCCEEEECCcccCCCCCHHHHH
Confidence 444443333 34678999 8899998763222 2 2222223322 1111 111111223322 35566
Q ss_pred HHHHHHHcCCcEEEEeCCCcchHHHH---hcCCcceEEEecC
Q 005041 247 AAYCAACAGIPVVITSGFAMDSIIKV---LEGKRVGTLFHRD 285 (717)
Q Consensus 247 aa~~a~~~gi~v~I~~g~~~~~l~~~---~tg~~iGT~i~a~ 285 (717)
.++.++. +||.|-+|-.++++.+. .+|-.+||.+..+
T Consensus 194 ~vr~~~~--~PVlvGSGvt~~Ni~~~l~~ADG~IVGS~~K~~ 233 (254)
T PF03437_consen 194 RVREAVP--VPVLVGSGVTPENIAEYLSYADGAIVGSYFKKD 233 (254)
T ss_pred HHHhcCC--CCEEEecCCCHHHHHHHHHhCCEEEEeeeeeeC
Confidence 6666555 88999999999999665 4677789998765
No 238
>cd01390 HMGB-UBF_HMG-box HMGB-UBF_HMG-box, class II and III members of the HMG-box superfamily of DNA-binding proteins. These proteins bind the minor groove of DNA in a non-sequence specific fashion and contain two or more tandem HMG boxes. Class II members include non-histone chromosomal proteins, HMG1 and HMG2, which bind to bent or distorted DNA such as four-way DNA junctions, synthetic DNA cruciforms, kinked cisplatin-modified DNA, DNA bulges, cross-overs in supercoiled DNA, and can cause looping of linear DNA. Class III members include nucleolar and mitochondrial transcription factors, UBF and mtTF1, which bind four-way DNA junctions.
Probab=35.56 E-value=86 Score=24.46 Aligned_cols=35 Identities=11% Similarity=0.129 Sum_probs=26.6
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHH
Q 005041 300 VAARESSRRLQALQSQDRRKILLDVADALEANESL 334 (717)
Q Consensus 300 ~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 334 (717)
+.++.....|+.+|.++|..+..+.....++...+
T Consensus 30 ~i~~~~~~~W~~ls~~eK~~y~~~a~~~~~~y~~e 64 (66)
T cd01390 30 EVTKILGEKWKELSEEEKKKYEEKAEKDKERYEKE 64 (66)
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHh
Confidence 45566677899999999999988877766655443
No 239
>PF09011 HMG_box_2: HMG-box domain; InterPro: IPR015101 This domain is predominantly found in Maelstrom homologue proteins. It has no known function. ; GO: 0005634 nucleus; PDB: 2EQZ_A 1V64_A 2CTO_A 1H5P_A 3TQ6_A 3FGH_A 3TMM_A 1J3X_A 2YRQ_A 1AAB_A ....
Probab=33.86 E-value=1.1e+02 Score=24.89 Aligned_cols=35 Identities=17% Similarity=0.195 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHH
Q 005041 299 AVAARESSRRLQALQSQDRRKILLDVADALEANES 333 (717)
Q Consensus 299 v~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 333 (717)
.+..+.+-..|+.+|.++|..+-.+....=++...
T Consensus 33 ~e~~k~~~~~Wk~Ls~~EK~~Y~~~A~~~k~~y~~ 67 (73)
T PF09011_consen 33 REVMKEISERWKSLSEEEKEPYEERAKEDKERYER 67 (73)
T ss_dssp HHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH
Confidence 34566777889999999999998876654444333
No 240
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=32.54 E-value=6.1e+02 Score=26.61 Aligned_cols=50 Identities=14% Similarity=0.292 Sum_probs=40.3
Q ss_pred HHhhccCCeEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChh
Q 005041 10 RDFLKNVKRVVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAV 65 (717)
Q Consensus 10 ~~~~~~~~~iVvKiGGs~l~~~~~~~~~~~l~~l~~~Ia~l~~~G~~vviVhGGg~ 65 (717)
++.|+.++.+++=+-|....... .+...++.|+.|+++|.++++|.-...
T Consensus 2 ~~~~~~y~~~l~DlDGvl~~G~~------~ipga~e~l~~L~~~g~~~iflTNn~~ 51 (269)
T COG0647 2 FDVMDKYDGFLFDLDGVLYRGNE------AIPGAAEALKRLKAAGKPVIFLTNNST 51 (269)
T ss_pred cchhhhcCEEEEcCcCceEeCCc------cCchHHHHHHHHHHcCCeEEEEeCCCC
Confidence 35677788899999999987654 256778999999999999999986644
No 241
>PF06945 DUF1289: Protein of unknown function (DUF1289); InterPro: IPR010710 This family consists of a number of hypothetical bacterial proteins. The aligned region spans around 56 residues and contains 4 highly conserved cysteine residues towards the N terminus. The function of this family is unknown.
Probab=31.74 E-value=52 Score=25.09 Aligned_cols=21 Identities=19% Similarity=0.355 Sum_probs=18.3
Q ss_pred HHhcCCHHHHHHHHHHHHHHH
Q 005041 308 RLQALQSQDRRKILLDVADAL 328 (717)
Q Consensus 308 ~w~~~~~~~R~~~L~~~a~~l 328 (717)
.|..++..+|.+++.++....
T Consensus 29 ~W~~~s~~er~~i~~~l~~R~ 49 (51)
T PF06945_consen 29 DWKSMSDDERRAILARLRARR 49 (51)
T ss_pred HHhhCCHHHHHHHHHHHHHHh
Confidence 599999999999999887654
No 242
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=31.67 E-value=82 Score=29.00 Aligned_cols=48 Identities=25% Similarity=0.502 Sum_probs=31.8
Q ss_pred CeEEEEeCCcccccCCCc-ccHHHHHHHHHHHHHHHHCCCeEEEEecChh
Q 005041 17 KRVVVKVGTAVVTRSDGR-LALGRLGALLEQLKELNSQGFEIILVSSGAV 65 (717)
Q Consensus 17 ~~iVvKiGGs~l~~~~~~-~~~~~l~~l~~~Ia~l~~~G~~vviVhGGg~ 65 (717)
|.+++=+.|.++.+..+. ..........+.+..++++|+.++++. |.+
T Consensus 2 K~i~~DiDGTL~~~~~~~y~~~~~~~~~ie~L~~l~~~G~~IiiaT-GR~ 50 (126)
T TIGR01689 2 KRLVMDLDNTITLTENGDYANVAPILAVIEKLRHYKALGFEIVISS-SRN 50 (126)
T ss_pred CEEEEeCCCCcccCCCCcccccccCHHHHHHHHHHHHCCCEEEEEC-CCC
Confidence 689999999998764321 100112466777888888999877776 434
No 243
>PF00505 HMG_box: HMG (high mobility group) box; InterPro: IPR000910 High mobility group (HMG or HMGB) proteins are a family of relatively low molecular weight non-histone components in chromatin. HMG1 (also called HMG-T in fish) and HMG2 are two highly related proteins that bind single-stranded DNA preferentially and unwind double-stranded DNA. Although they have no sequence specificity, they have a high affinity for bent or distorted DNA, and bend linear DNA. HMG1 and HMG2 contain two DNA-binding HMG-box domains (A and B) that show structural and functional differences, and have a long acidic C-terminal domain rich in aspartic and glutamic acid residues. The acidic tail modulates the affinity of the tandem HMG boxes in HMG1 and 2 for a variety of DNA targets. HMG1 and 2 appear to play important architectural roles in the assembly of nucleoprotein complexes in a variety of biological processes, for example V(D)J recombination, the initiation of transcription, and DNA repair []. The profile in this entry describing the HMG-domains is much more general than the signature. In addition to the HMG1 and HMG2 proteins, HMG-domains occur in single or multiple copies in the following protein classes; the SOX family of transcription factors; SRY sex determining region Y protein and related proteins []; LEF1 lymphoid enhancer binding factor 1 []; SSRP recombination signal recognition protein; MTF1 mitochondrial transcription factor 1; UBF1/2 nucleolar transcription factors; Abf2 yeast ARS-binding factor []; and Saccharomyces cerevisiae transcription factors Ixr1, Rox1, Nhp6a, Nhp6b and Spp41.; GO: 0003677 DNA binding; PDB: 1I11_A 1J3C_A 1J3D_A 1WZ6_A 1WGF_A 2D7L_A 1GT0_D 3U2B_C 2CRJ_A 2CS1_A ....
Probab=31.00 E-value=1.1e+02 Score=24.18 Aligned_cols=36 Identities=8% Similarity=0.114 Sum_probs=27.6
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHH
Q 005041 301 AARESSRRLQALQSQDRRKILLDVADALEANESLIK 336 (717)
Q Consensus 301 ~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~ 336 (717)
..+.+-..|..+|.++|..+-.......+++..++.
T Consensus 31 i~~~~~~~W~~l~~~eK~~y~~~a~~~~~~y~~~~~ 66 (69)
T PF00505_consen 31 ISKILAQMWKNLSEEEKAPYKEEAEEEKERYEKEMP 66 (69)
T ss_dssp HHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chhhHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455666789999999999999887777766655543
No 244
>smart00398 HMG high mobility group.
Probab=29.86 E-value=1.4e+02 Score=23.43 Aligned_cols=35 Identities=11% Similarity=0.141 Sum_probs=26.7
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHH
Q 005041 301 AARESSRRLQALQSQDRRKILLDVADALEANESLI 335 (717)
Q Consensus 301 ~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 335 (717)
.++.....|+.+|.++|..+........+++..++
T Consensus 32 i~~~~~~~W~~l~~~ek~~y~~~a~~~~~~y~~~~ 66 (70)
T smart00398 32 ISKKLGERWKLLSEEEKAPYEEKAKKDKERYEEEM 66 (70)
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 34556678999999999999888777666665544
No 245
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=28.16 E-value=94 Score=32.06 Aligned_cols=45 Identities=9% Similarity=0.295 Sum_probs=34.3
Q ss_pred CCeEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChh
Q 005041 16 VKRVVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAV 65 (717)
Q Consensus 16 ~~~iVvKiGGs~l~~~~~~~~~~~l~~l~~~Ia~l~~~G~~vviVhGGg~ 65 (717)
.+.++.-+.|+.+.+. +.++. ...+.|..++++|++++|..|=..
T Consensus 3 ~kli~~DlDGTLl~~~-~~i~~----~~~~ai~~l~~~G~~~~iaTGR~~ 47 (270)
T PRK10513 3 IKLIAIDMDGTLLLPD-HTISP----AVKQAIAAARAKGVNVVLTTGRPY 47 (270)
T ss_pred eEEEEEecCCcCcCCC-CccCH----HHHHHHHHHHHCCCEEEEecCCCh
Confidence 5788999999999864 35553 446778889999999888875533
No 246
>PTZ00174 phosphomannomutase; Provisional
Probab=27.73 E-value=1.1e+02 Score=31.34 Aligned_cols=44 Identities=18% Similarity=0.336 Sum_probs=34.3
Q ss_pred CCeEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecCh
Q 005041 16 VKRVVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGA 64 (717)
Q Consensus 16 ~~~iVvKiGGs~l~~~~~~~~~~~l~~l~~~Ia~l~~~G~~vviVhGGg 64 (717)
.++++.=+.|..+.++. .++. ...+.|+.++++|++++|..|-.
T Consensus 5 ~klia~DlDGTLL~~~~-~is~----~~~~ai~~l~~~Gi~~viaTGR~ 48 (247)
T PTZ00174 5 KTILLFDVDGTLTKPRN-PITQ----EMKDTLAKLKSKGFKIGVVGGSD 48 (247)
T ss_pred CeEEEEECcCCCcCCCC-CCCH----HHHHHHHHHHHCCCEEEEEcCCC
Confidence 57788899999998753 4653 34677888999999999988753
No 247
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=27.29 E-value=1.1e+02 Score=30.69 Aligned_cols=45 Identities=16% Similarity=0.428 Sum_probs=33.8
Q ss_pred CCeEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChh
Q 005041 16 VKRVVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAV 65 (717)
Q Consensus 16 ~~~iVvKiGGs~l~~~~~~~~~~~l~~l~~~Ia~l~~~G~~vviVhGGg~ 65 (717)
.+.++.=+.|+.+.+.. .++ ....+.|..+++.|++++++.|=..
T Consensus 3 ~kli~~DlDGTLl~~~~-~i~----~~~~~al~~l~~~G~~~~iaTGR~~ 47 (230)
T PRK01158 3 IKAIAIDIDGTITDKDR-RLS----LKAVEAIRKAEKLGIPVILATGNVL 47 (230)
T ss_pred eeEEEEecCCCcCCCCC-ccC----HHHHHHHHHHHHCCCEEEEEcCCch
Confidence 47788899999997643 444 3456778889999999888886543
No 248
>cd01388 SOX-TCF_HMG-box SOX-TCF_HMG-box, class I member of the HMG-box superfamily of DNA-binding proteins. These proteins contain a single HMG box, and bind the minor groove of DNA in a highly sequence-specific manner. Members include SRY and its homologs in insects and vertebrates, and transcription factor-like proteins, TCF-1, -3, -4, and LEF-1. They appear to bind the minor groove of the A/T C A A A G/C-motif.
Probab=27.12 E-value=1.4e+02 Score=24.10 Aligned_cols=34 Identities=12% Similarity=0.171 Sum_probs=25.3
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHH
Q 005041 300 VAARESSRRLQALQSQDRRKILLDVADALEANES 333 (717)
Q Consensus 300 ~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 333 (717)
+.++.....|+.+|.++|..+........+++.+
T Consensus 31 eisk~l~~~Wk~ls~~eK~~y~~~a~~~k~~y~~ 64 (72)
T cd01388 31 AISKILGDRWKALSNEEKQPYYEEAKKLKELHMK 64 (72)
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHH
Confidence 4466677789999999999888776665555443
No 249
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=26.97 E-value=1.1e+02 Score=31.61 Aligned_cols=45 Identities=11% Similarity=0.220 Sum_probs=34.4
Q ss_pred CCeEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChh
Q 005041 16 VKRVVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAV 65 (717)
Q Consensus 16 ~~~iVvKiGGs~l~~~~~~~~~~~l~~l~~~Ia~l~~~G~~vviVhGGg~ 65 (717)
.+.++.=+.|..+.+. +.++ ....+.|+.|+++|+++++..|=..
T Consensus 2 ~kli~~DlDGTLl~~~-~~i~----~~~~~ai~~l~~~G~~~~iaTGR~~ 46 (272)
T PRK15126 2 ARLAAFDMDGTLLMPD-HHLG----EKTLSTLARLRERDITLTFATGRHV 46 (272)
T ss_pred ccEEEEeCCCcCcCCC-CcCC----HHHHHHHHHHHHCCCEEEEECCCCH
Confidence 5789999999999854 3565 3456788889999999888875533
No 250
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=26.12 E-value=1.2e+02 Score=31.15 Aligned_cols=43 Identities=16% Similarity=0.365 Sum_probs=33.3
Q ss_pred CCeEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecC
Q 005041 16 VKRVVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSG 63 (717)
Q Consensus 16 ~~~iVvKiGGs~l~~~~~~~~~~~l~~l~~~Ia~l~~~G~~vviVhGG 63 (717)
.+.++.=+.|..+.++. .++. ...+.|..++++|++++|..|=
T Consensus 3 ~kli~~DlDGTLl~~~~-~i~~----~~~~ai~~~~~~G~~~~iaTGR 45 (272)
T PRK10530 3 YRVIALDLDGTLLTPKK-TILP----ESLEALARAREAGYKVIIVTGR 45 (272)
T ss_pred ccEEEEeCCCceECCCC-ccCH----HHHHHHHHHHHCCCEEEEEcCC
Confidence 57889999999997653 4553 3467888899999998888744
No 251
>PRK10976 putative hydrolase; Provisional
Probab=25.75 E-value=1.2e+02 Score=31.26 Aligned_cols=45 Identities=16% Similarity=0.234 Sum_probs=34.7
Q ss_pred CCeEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChh
Q 005041 16 VKRVVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAV 65 (717)
Q Consensus 16 ~~~iVvKiGGs~l~~~~~~~~~~~l~~l~~~Ia~l~~~G~~vviVhGGg~ 65 (717)
.|.++.=+.|..+.+. +.++ ....+.|..++++|++++|..|=..
T Consensus 2 ikli~~DlDGTLl~~~-~~is----~~~~~ai~~l~~~G~~~~iaTGR~~ 46 (266)
T PRK10976 2 YQVVASDLDGTLLSPD-HTLS----PYAKETLKLLTARGIHFVFATGRHH 46 (266)
T ss_pred ceEEEEeCCCCCcCCC-CcCC----HHHHHHHHHHHHCCCEEEEEcCCCh
Confidence 4788999999999864 3565 3456788889999999999885533
No 252
>PF07045 DUF1330: Protein of unknown function (DUF1330); InterPro: IPR010753 This family consists of several hypothetical bacterial proteins of around 90 residues in length. The function of this family is unknown.; PDB: 2FIU_B 3HHL_A 3DCA_D 3LO3_I.
Probab=24.70 E-value=1e+02 Score=24.57 Aligned_cols=55 Identities=11% Similarity=0.116 Sum_probs=35.5
Q ss_pred hhhHHHHHHHHHHcCceEe--cCccccccccCCCCccccccccCceEEEEEeCCHHHHHHHHHhcCC
Q 005041 558 NGALNELVVELQHEGVGLF--GGPRASKLLQIPETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGS 622 (717)
Q Consensus 558 ~~f~~~l~~~~~~~~~~~~--g~~~~~~~~pi~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~ 622 (717)
++..++....+++.|.+++ |+... .+.-+.=...+.|+.|.|.+.|.++.|+.+|
T Consensus 5 ~~Y~~~~~~~l~~~GG~~l~~~~~~~----------~leG~~~~~~~viieFPs~~aa~~~~~speY 61 (65)
T PF07045_consen 5 QEYREAVPPILEKYGGRVLARGGEPE----------VLEGDWDPDRVVIIEFPSMEAAKAWYNSPEY 61 (65)
T ss_dssp HHHHHHHHHHHHHTT-EEEEECEEEE----------EEEST-SSSEEEEEEESSHHHHHHHHCSHHH
T ss_pred HHHHHHHHHHHHHcCCEEEEECCcee----------EEecCCCCCeEEEEECCCHHHHHHHHCCHhH
Confidence 4677777777888876653 22110 1111122368899999999999999998765
No 253
>COG1576 Uncharacterized conserved protein [Function unknown]
Probab=22.91 E-value=2.7e+02 Score=26.59 Aligned_cols=46 Identities=17% Similarity=0.304 Sum_probs=35.9
Q ss_pred eEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChhHhhHHHHh
Q 005041 18 RVVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLR 73 (717)
Q Consensus 18 ~iVvKiGGs~l~~~~~~~~~~~l~~l~~~Ia~l~~~G~~vviVhGGg~~~~~~~l~ 73 (717)
.+++-+=|..+++ +.|++.|..+...|..+.++.||..+....+.+
T Consensus 70 vi~Ld~~Gk~~sS----------e~fA~~l~~~~~~G~~i~f~IGG~~Gl~~~~~~ 115 (155)
T COG1576 70 VVLLDIRGKALSS----------EEFADFLERLRDDGRDISFLIGGADGLSEAVKA 115 (155)
T ss_pred EEEEecCCCcCCh----------HHHHHHHHHHHhcCCeEEEEEeCcccCCHHHHH
Confidence 3555566766665 678999999999998899999998888876643
No 254
>PLN02645 phosphoglycolate phosphatase
Probab=22.71 E-value=1.4e+02 Score=31.79 Aligned_cols=53 Identities=15% Similarity=0.368 Sum_probs=43.1
Q ss_pred hHhHHhhccCCeEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChh
Q 005041 7 DHTRDFLKNVKRVVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAV 65 (717)
Q Consensus 7 ~~~~~~~~~~~~iVvKiGGs~l~~~~~~~~~~~l~~l~~~Ia~l~~~G~~vviVhGGg~ 65 (717)
+++++++...+.+++=+.|....+.. + +....+.|..|++.|++++++.+...
T Consensus 19 ~~~~~~~~~~~~~~~D~DGtl~~~~~--~----~~ga~e~l~~lr~~g~~~~~~TN~~~ 71 (311)
T PLN02645 19 ENADELIDSVETFIFDCDGVIWKGDK--L----IEGVPETLDMLRSMGKKLVFVTNNST 71 (311)
T ss_pred HHHHHHHHhCCEEEEeCcCCeEeCCc--c----CcCHHHHHHHHHHCCCEEEEEeCCCC
Confidence 35788888889999999999998653 1 35567888889999999999998764
No 255
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=22.27 E-value=2.1e+02 Score=30.44 Aligned_cols=47 Identities=21% Similarity=0.359 Sum_probs=36.6
Q ss_pred CCeEEEEeCCcccccCCC-cccHHHHHHHHHHHHHHHHCCCeEEEEecChh
Q 005041 16 VKRVVVKVGTAVVTRSDG-RLALGRLGALLEQLKELNSQGFEIILVSSGAV 65 (717)
Q Consensus 16 ~~~iVvKiGGs~l~~~~~-~~~~~~l~~l~~~Ia~l~~~G~~vviVhGGg~ 65 (717)
.+.+|.-+.|+.+++... ++. -..+.+.|..|+++|+++.|+.+|..
T Consensus 128 ~~~i~~D~D~TL~~~~~~v~ir---dp~V~EtL~eLkekGikLaIvTNg~R 175 (303)
T PHA03398 128 PHVIVFDLDSTLITDEEPVRIR---DPFVYDSLDELKERGCVLVLWSYGNR 175 (303)
T ss_pred ccEEEEecCCCccCCCCccccC---ChhHHHHHHHHHHCCCEEEEEcCCCh
Confidence 468999999999998642 232 14667788889999999999998844
No 256
>TIGR00246 tRNA_RlmH_YbeA rRNA large subunit m3Psi methyltransferase RlmH. This protein, in the SPOUT methyltransferase family, previously designated YbeA in E. coli, was shown to be responsible for a further modification, a methylation, to a pseudouridine base in ribosomal large subunit RNA.
Probab=21.45 E-value=2.3e+02 Score=27.01 Aligned_cols=45 Identities=18% Similarity=0.267 Sum_probs=34.4
Q ss_pred eEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChhHhhHHHH
Q 005041 18 RVVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRL 72 (717)
Q Consensus 18 ~iVvKiGGs~l~~~~~~~~~~~l~~l~~~Ia~l~~~G~~vviVhGGg~~~~~~~l 72 (717)
.+++-..|..+++ ..|++.|..+...|.+++.|.||..+++..+.
T Consensus 68 ~i~LDe~Gk~~sS----------~~fA~~l~~~~~~g~~i~FvIGGa~G~~~~v~ 112 (153)
T TIGR00246 68 VVTLDIPGKPWTT----------PQLADTLEKWKTDGRDVTLLIGGPEGLSPTCK 112 (153)
T ss_pred EEEEcCCCCcCCH----------HHHHHHHHHHhccCCeEEEEEcCCCcCCHHHH
Confidence 4556667777665 57888888888888789999999877887654
No 257
>cd00084 HMG-box High Mobility Group (HMG)-box is found in a variety of eukaryotic chromosomal proteins and transcription factors. HMGs bind to the minor groove of DNA and have been classified by DNA binding preferences. Two phylogenically distinct groups of Class I proteins bind DNA in a sequence specific fashion and contain a single HMG box. One group (SOX-TCF) includes transcription factors, TCF-1, -3, -4; and also SRY and LEF-1, which bind four-way DNA junctions and duplex DNA targets. The second group (MATA) includes fungal mating type gene products MC, MATA1 and Ste11. Class II and III proteins (HMGB-UBF) bind DNA in a non-sequence specific fashion and contain two or more tandem HMG boxes. Class II members include non-histone chromosomal proteins, HMG1 and HMG2, which bind to bent or distorted DNA such as four-way DNA junctions, synthetic DNA cruciforms, kinked cisplatin-modified DNA, DNA bulges, cross-overs in supercoiled DNA, and can cause looping of linear DNA. Class III member
Probab=21.44 E-value=2.5e+02 Score=21.57 Aligned_cols=33 Identities=12% Similarity=0.126 Sum_probs=24.7
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCH
Q 005041 300 VAARESSRRLQALQSQDRRKILLDVADALEANE 332 (717)
Q Consensus 300 ~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 332 (717)
+..+.....|+.+|.++|..+.........++.
T Consensus 30 ~i~~~~~~~W~~l~~~~k~~y~~~a~~~~~~y~ 62 (66)
T cd00084 30 EISKILGEMWKSLSEEEKKKYEEKAEKDKERYE 62 (66)
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 345566778999999999999877766555543
No 258
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=21.02 E-value=2.5e+02 Score=29.85 Aligned_cols=51 Identities=22% Similarity=0.302 Sum_probs=38.8
Q ss_pred cCCeEEEEeCCcccccCCC-cccHHHHHHHHHHHHHHHHCCCeEEEEecChhHhh
Q 005041 15 NVKRVVVKVGTAVVTRSDG-RLALGRLGALLEQLKELNSQGFEIILVSSGAVGVG 68 (717)
Q Consensus 15 ~~~~iVvKiGGs~l~~~~~-~~~~~~l~~l~~~Ia~l~~~G~~vviVhGGg~~~~ 68 (717)
..+.+|.=+.|+.+++... ++.. ..+.+.|..|++.|++++|+.+|+...-
T Consensus 125 ~~kvIvFDLDgTLi~~~~~v~ird---PgV~EaL~~LkekGikLaIaTS~~Re~v 176 (301)
T TIGR01684 125 PPHVVVFDLDSTLITDEEPVRIRD---PRIYDSLTELKKRGCILVLWSYGDRDHV 176 (301)
T ss_pred cceEEEEecCCCCcCCCCccccCC---HHHHHHHHHHHHCCCEEEEEECCCHHHH
Confidence 3568999999999998642 2321 5677888889999999999998855433
No 259
>PRK09875 putative hydrolase; Provisional
Probab=21.00 E-value=9.5e+02 Score=25.44 Aligned_cols=72 Identities=17% Similarity=0.315 Sum_probs=43.4
Q ss_pred HHhhcCCCCcceeEecccccCchhHhhHHHHHHHHHHhCCCeEEecCCCeeeccCCCCCCCCCeeecchHHHHHHHhhc-
Q 005041 111 TLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSLAGLLALEL- 189 (717)
Q Consensus 111 ~~l~~~g~~~~~~~~~~~d~~~~~~~~~~~~~i~~lL~~g~vPVv~g~d~v~~~~~~~~~~~~~~~~sD~~A~~lA~~L- 189 (717)
..|.+.|+++.+++++..|.. .+.+.+.++++.|...=+.. +.. ..+...+..+..+...+
T Consensus 170 ~il~e~Gvd~~rvvi~H~d~~------~d~~~~~~l~~~G~~l~fD~---~g~---------~~~~pd~~r~~~i~~L~~ 231 (292)
T PRK09875 170 ALLQAHGVDLSRVTVGHCDLK------DNLDNILKMIDLGAYVQFDT---IGK---------NSYYPDEKRIAMLHALRD 231 (292)
T ss_pred HHHHHcCcCcceEEEeCCCCC------CCHHHHHHHHHcCCEEEecc---CCC---------cccCCHHHHHHHHHHHHh
Confidence 345567888888888755422 13578999999998766631 111 11112223344444332
Q ss_pred -C-CCEEEEeccc
Q 005041 190 -K-ADLLVLLSDV 200 (717)
Q Consensus 190 -~-Ad~li~lTDV 200 (717)
| +|++++-+|.
T Consensus 232 ~Gy~drilLS~D~ 244 (292)
T PRK09875 232 RGLLNRVMLSMDI 244 (292)
T ss_pred cCCCCeEEEeCCC
Confidence 6 8999998888
No 260
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=20.56 E-value=1.6e+02 Score=30.27 Aligned_cols=46 Identities=13% Similarity=0.320 Sum_probs=36.4
Q ss_pred cCCeEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEecChh
Q 005041 15 NVKRVVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAV 65 (717)
Q Consensus 15 ~~~~iVvKiGGs~l~~~~~~~~~~~l~~l~~~Ia~l~~~G~~vviVhGGg~ 65 (717)
+.+.+++=+.|..+.+.. .+. ....+.|+.++++|++++|+.|-..
T Consensus 2 ~~kli~~DlDGTLl~~~~-~i~----~~~~~al~~~~~~g~~v~iaTGR~~ 47 (264)
T COG0561 2 MIKLLAFDLDGTLLDSNK-TIS----PETKEALARLREKGVKVVLATGRPL 47 (264)
T ss_pred CeeEEEEcCCCCccCCCC-ccC----HHHHHHHHHHHHCCCEEEEECCCCh
Confidence 457889999999999864 343 4667777889999999999997744
Done!