BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005045
(717 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 162 bits (411), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 109/330 (33%), Positives = 171/330 (51%), Gaps = 49/330 (14%)
Query: 380 SYSDISKSTDNFSKENLIGTGSFGSVYKGTLGDGTIVAIKVLKLQQ-QGALKSFIDECNA 438
S ++ ++DNFS +N++G G FG VYKG L DGT+VA+K LK ++ QG F E
Sbjct: 29 SLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTEVEM 88
Query: 439 LKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQ 498
+ HRN+LR+ C + + LV+ +M+NG++ L P L +
Sbjct: 89 ISMAVHRNLLRLRGFCMT-----PTERLLVYPYMANGSVASCLRERPESQ---PPLDWPK 140
Query: 499 RLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPS 558
R IA+ A L YLH HCD I H D+K +N+LLD++ A VGDFGLAK +
Sbjct: 141 RQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM------DY 194
Query: 559 KNQTVSIGLKGSIGYIPPEHMN-GQVSILGDIYSYGILLLEMFTGKRPTGDMFK----DD 613
K+ V ++G+IG+I PE+++ G+ S D++ YG++LLE+ TG+R D+ + DD
Sbjct: 195 KDXHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQR-AFDLARLANDDD 253
Query: 614 FSIHMFVSMALPDHVMDILDPSMPLDXXXXXXXXXXXXXXXXXXXXXDLEVNTKNKLEEC 673
+ +V L + ++ L DL+ N K+ E
Sbjct: 254 VMLLDWVKGLLKEKKLEAL-------------------------VDVDLQGNYKD---EE 285
Query: 674 FVSVLRIGLMCSTTSPRERIAMNVVVNNLK 703
++++ L+C+ +SP ER M+ VV L+
Sbjct: 286 VEQLIQVALLCTQSSPMERPKMSEVVRMLE 315
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 159 bits (401), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 107/330 (32%), Positives = 169/330 (51%), Gaps = 49/330 (14%)
Query: 380 SYSDISKSTDNFSKENLIGTGSFGSVYKGTLGDGTIVAIKVLKLQQ-QGALKSFIDECNA 438
S ++ ++DNF +N++G G FG VYKG L DG +VA+K LK ++ QG F E
Sbjct: 21 SLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTEVEM 80
Query: 439 LKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQ 498
+ HRN+LR+ C + + LV+ +M+NG++ L P L +
Sbjct: 81 ISMAVHRNLLRLRGFCMT-----PTERLLVYPYMANGSVASCLRERPESQ---PPLDWPK 132
Query: 499 RLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPS 558
R IA+ A L YLH HCD I H D+K +N+LLD++ A VGDFGLAK +
Sbjct: 133 RQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM------DY 186
Query: 559 KNQTVSIGLKGSIGYIPPEHMN-GQVSILGDIYSYGILLLEMFTGKRPTGDMFK----DD 613
K+ V ++G IG+I PE+++ G+ S D++ YG++LLE+ TG+R D+ + DD
Sbjct: 187 KDXHVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAF-DLARLANDDD 245
Query: 614 FSIHMFVSMALPDHVMDILDPSMPLDXXXXXXXXXXXXXXXXXXXXXDLEVNTKNKLEEC 673
+ +V L + ++ L DL+ N K++ E
Sbjct: 246 VMLLDWVKGLLKEKKLEAL-------------------------VDVDLQGNYKDEEVE- 279
Query: 674 FVSVLRIGLMCSTTSPRERIAMNVVVNNLK 703
++++ L+C+ +SP ER M+ VV L+
Sbjct: 280 --QLIQVALLCTQSSPMERPKMSEVVRMLE 307
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/223 (34%), Positives = 122/223 (54%), Gaps = 19/223 (8%)
Query: 383 DISKSTDNFSKENLIGTGSFGSVYKGTLGDGTIVAIKVLKLQQQGALKSFIDECNALKST 442
D+ ++T+NF + LIG G FG VYKG L DG VA+K + ++ F E L
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC 92
Query: 443 RHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNI 502
RH +++ +I C E N+ L++++M NGNL + L+ S +S QRL I
Sbjct: 93 RHPHLVSLIGFCD----ERNEM-ILIYKYMENGNLKRHLYGSDLPTMS---MSWEQRLEI 144
Query: 503 AIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQT 562
I A L YLH I H D+K N+LLD++ + DFG++K E+ +QT
Sbjct: 145 CIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTEL------DQT 195
Query: 563 -VSIGLKGSIGYIPPEH-MNGQVSILGDIYSYGILLLEMFTGK 603
+ +KG++GYI PE+ + G+++ D+YS+G++L E+ +
Sbjct: 196 HLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCAR 238
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 103/370 (27%), Positives = 162/370 (43%), Gaps = 36/370 (9%)
Query: 13 QDLNLTYNYLSGKIPTNLSHCTELRSFEASVNDFVGQIPNQLSSLTKLEIIGLGGSNLTG 72
Q L+++ N LSG +S CTEL+ S N FVG IP L L+ + L + TG
Sbjct: 226 QHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTG 283
Query: 73 NVPAWI-GNFSSLKALSLAWNNLRGSIPNELGQLSGLGFFTLYGNFXXXXXXXXXXXXXX 131
+P ++ G +L L L+ N+ G++P G S
Sbjct: 284 EIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCS------------------------L 319
Query: 132 XXXXXVTQNQLHGQLPTDVGLTLPNLKIFAGAVNYFTGSIPVSLSN-ASNLQVLDFAENG 190
++ N G+LP D L + LK+ + N F+G +P SL+N +++L LD + N
Sbjct: 320 LESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNN 379
Query: 191 LTGTI-PGNFGSLKDLVRLNFDQNELGSREIGDLNFLKFLANCTSLEVLGLARNSFGGEM 249
+G I P + K+ ++ + QN + +I L+NC+ L L L+ N G +
Sbjct: 380 FSGPILPNLCQNPKNTLQELYLQNNGFTGKIP-----PTLSNCSELVSLHLSFNYLSGTI 434
Query: 250 PISIANLSTHLRRLTMGENLMHGNIPVXXXXXXXXXXXXXXXXXXXXSVPEVIGRLNKLE 309
P S+ +LS LR L + N++ G IP +P + L
Sbjct: 435 PSSLGSLS-KLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLN 493
Query: 310 GLGLNVNKFSGLIPSSLGNLTILTRLWMEENRLEGSIPPSLGNCQKXXXXXXXXXXXXGT 369
+ L+ N+ +G IP +G L L L + N G+IP LG+C+ GT
Sbjct: 494 WISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGT 553
Query: 370 IPKEV-RQSG 378
IP + +QSG
Sbjct: 554 IPAAMFKQSG 563
Score = 108 bits (271), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 101/351 (28%), Positives = 152/351 (43%), Gaps = 42/351 (11%)
Query: 13 QDLNLTYNYLSGKIPTNLSHCTELRSFEASVNDFVGQIPNQLSSLTKLEIIGLGGSNLTG 72
Q+L L N +GKIP LS+C+EL S S N G IP+ L SL+KL + L + L G
Sbjct: 397 QELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEG 456
Query: 73 NVPAWIGNFSSLKALSLAWNNLRGSIPNELGQLSGLGFFTLYGNFXXXXXXXXXXXXXXX 132
+P + +L+ L L +N+L G IP+ L + L + +L
Sbjct: 457 EIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISL------------------- 497
Query: 133 XXXXVTQNQLHGQLPTDVGLTLPNLKIFAGAVNYFTGSIPVSLSNASNLQVLDFAENGLT 192
+ N+L G++P +G L NL I + N F+G+IP L + +L LD N
Sbjct: 498 -----SNNRLTGEIPKWIG-RLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFN 551
Query: 193 GTIPGNFGSLKDLVRLNF--------DQNELGSREI-GDLNFLKF-------LANCTSLE 236
GTIP + NF +N+ +E G N L+F L ++
Sbjct: 552 GTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRN 611
Query: 237 VLGLARNSFGGEMPISIANLSTHLRRLTMGENLMHGNIPVXXXXXXXXXXXXXXXXXXXX 296
+ +GG + N + + L M N++ G IP
Sbjct: 612 PCNITSRVYGGHTSPTFDN-NGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISG 670
Query: 297 SVPEVIGRLNKLEGLGLNVNKFSGLIPSSLGNLTILTRLWMEENRLEGSIP 347
S+P+ +G L L L L+ NK G IP ++ LT+LT + + N L G IP
Sbjct: 671 SIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIP 721
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 117/416 (28%), Positives = 161/416 (38%), Gaps = 66/416 (15%)
Query: 15 LNLTYNYLSGKIPT--NLSHCTELRSFEASVN--DFVGQIPNQLSSLTKLEIIGLGGSNL 70
L+L+ N LSG + T +L C+ L+ S N DF G++ L L LE++ L +++
Sbjct: 105 LDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLK-LNSLEVLDLSANSI 163
Query: 71 TG-NVPAWI--------------GNFSS----------LKALSLAWNNLRGSIPNELGQL 105
+G NV W+ GN S L+ L ++ NN IP LG
Sbjct: 164 SGANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIP-FLGDC 222
Query: 106 SGLGFFTLYGNFXXXXXXXXXXXXXXXXXXXVTQNQLHGQLPTDVGLTLPNLKIFAGAVN 165
S L + GN ++ NQ G +P L L +L+ + A N
Sbjct: 223 SALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPP---LPLKSLQYLSLAEN 279
Query: 166 YFTGSIPVSLSNASN-LQVLDFAENGLTGTIPGNFGSLKDLVRLNFDQNELGSREIGDLN 224
FTG IP LS A + L LD + N G +P FGS L L N S E+
Sbjct: 280 KFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNF-SGELPMDT 338
Query: 225 FLKFLANCTSLEVLGLARNSFGGEMPISIANLSTHL------------------------ 260
LK L+VL L+ N F GE+P S+ NLS L
Sbjct: 339 LLKMRG----LKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKN 394
Query: 261 --RRLTMGENLMHGNIPVXXXXXXXXXXXXXXXXXXXXSVPEVIGRLNKLEGLGLNVNKF 318
+ L + N G IP ++P +G L+KL L L +N
Sbjct: 395 TLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNML 454
Query: 319 SGLIPSSLGNLTILTRLWMEENRLEGSIPPSLGNCQKXXXXXXXXXXXXGTIPKEV 374
G IP L + L L ++ N L G IP L NC G IPK +
Sbjct: 455 EGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWI 510
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 124/331 (37%), Gaps = 73/331 (22%)
Query: 65 LGGSNLTGNVPAWIGNFSSLKALSLAWNNLRGSIPN--ELGQLSGLGFFTLYGN-FXXXX 121
L S++ G+V + + +SL +L L+ N+L G + LG SGL F + N
Sbjct: 84 LSNSHINGSVSGFKCS-ASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPG 142
Query: 122 XXXXXXXXXXXXXXXVTQNQLHGQLPTDVGLTLPN----LKIFAGAVNYFTGSIPVSLSN 177
++ N + G VG L + LK A + N +G + VS
Sbjct: 143 KVSGGLKLNSLEVLDLSANSISGA--NVVGWVLSDGCGELKHLAISGNKISGDVDVS--R 198
Query: 178 ASNLQVLDFAENGLTGTIPGNFGSLKDLVRLNFDQNELGSREIGDLNFLKFLANCTSLEV 237
NL+ LD + N + IP FL +C++L+
Sbjct: 199 CVNLEFLDVSSNNFSTGIP-------------------------------FLGDCSALQH 227
Query: 238 LGLARNSFGGEMPISIANLSTHLRRLTMGENLMHGNIPVXXXXXXXXXXXXXXXXXXXXS 297
L ++ N G+ +I+ T L+ L + N G IP
Sbjct: 228 LDISGNKLSGDFSRAIST-CTELKLLNISSNQFVGPIP---------------------P 265
Query: 298 VPEVIGRLNKLEGLGLNVNKFSGLIPSSL-GNLTILTRLWMEENRLEGSIPPSLGNCQKX 356
+P L L+ L L NKF+G IP L G LT L + N G++PP G+C
Sbjct: 266 LP-----LKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLL 320
Query: 357 XXXXXXXXXXXGTIPKE--VRQSGMSYSDIS 385
G +P + ++ G+ D+S
Sbjct: 321 ESLALSSNNFSGELPMDTLLKMRGLKVLDLS 351
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
Query: 311 LGLNVNKFSGLIPSSLGNLTILTRLWMEENRLEGSIPPSLGNCQKXXXXXXXXXXXXGTI 370
L ++ N SG IP +G++ L L + N + GSIP +G+ + G I
Sbjct: 637 LDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRI 696
Query: 371 PKEVRQSGMSYSDISKSTDNFS 392
P+ + M ++I S +N S
Sbjct: 697 PQAMSALTM-LTEIDLSNNNLS 717
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 103/370 (27%), Positives = 162/370 (43%), Gaps = 36/370 (9%)
Query: 13 QDLNLTYNYLSGKIPTNLSHCTELRSFEASVNDFVGQIPNQLSSLTKLEIIGLGGSNLTG 72
Q L+++ N LSG +S CTEL+ S N FVG IP L L+ + L + TG
Sbjct: 223 QHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTG 280
Query: 73 NVPAWI-GNFSSLKALSLAWNNLRGSIPNELGQLSGLGFFTLYGNFXXXXXXXXXXXXXX 131
+P ++ G +L L L+ N+ G++P G S
Sbjct: 281 EIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCS------------------------L 316
Query: 132 XXXXXVTQNQLHGQLPTDVGLTLPNLKIFAGAVNYFTGSIPVSLSN-ASNLQVLDFAENG 190
++ N G+LP D L + LK+ + N F+G +P SL+N +++L LD + N
Sbjct: 317 LESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNN 376
Query: 191 LTGTI-PGNFGSLKDLVRLNFDQNELGSREIGDLNFLKFLANCTSLEVLGLARNSFGGEM 249
+G I P + K+ ++ + QN + +I L+NC+ L L L+ N G +
Sbjct: 377 FSGPILPNLCQNPKNTLQELYLQNNGFTGKIP-----PTLSNCSELVSLHLSFNYLSGTI 431
Query: 250 PISIANLSTHLRRLTMGENLMHGNIPVXXXXXXXXXXXXXXXXXXXXSVPEVIGRLNKLE 309
P S+ +LS LR L + N++ G IP +P + L
Sbjct: 432 PSSLGSLS-KLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLN 490
Query: 310 GLGLNVNKFSGLIPSSLGNLTILTRLWMEENRLEGSIPPSLGNCQKXXXXXXXXXXXXGT 369
+ L+ N+ +G IP +G L L L + N G+IP LG+C+ GT
Sbjct: 491 WISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGT 550
Query: 370 IPKEV-RQSG 378
IP + +QSG
Sbjct: 551 IPAAMFKQSG 560
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 101/351 (28%), Positives = 152/351 (43%), Gaps = 42/351 (11%)
Query: 13 QDLNLTYNYLSGKIPTNLSHCTELRSFEASVNDFVGQIPNQLSSLTKLEIIGLGGSNLTG 72
Q+L L N +GKIP LS+C+EL S S N G IP+ L SL+KL + L + L G
Sbjct: 394 QELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEG 453
Query: 73 NVPAWIGNFSSLKALSLAWNNLRGSIPNELGQLSGLGFFTLYGNFXXXXXXXXXXXXXXX 132
+P + +L+ L L +N+L G IP+ L + L + +L
Sbjct: 454 EIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISL------------------- 494
Query: 133 XXXXVTQNQLHGQLPTDVGLTLPNLKIFAGAVNYFTGSIPVSLSNASNLQVLDFAENGLT 192
+ N+L G++P +G L NL I + N F+G+IP L + +L LD N
Sbjct: 495 -----SNNRLTGEIPKWIG-RLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFN 548
Query: 193 GTIPGNFGSLKDLVRLNF--------DQNELGSREI-GDLNFLKF-------LANCTSLE 236
GTIP + NF +N+ +E G N L+F L ++
Sbjct: 549 GTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRN 608
Query: 237 VLGLARNSFGGEMPISIANLSTHLRRLTMGENLMHGNIPVXXXXXXXXXXXXXXXXXXXX 296
+ +GG + N + + L M N++ G IP
Sbjct: 609 PCNITSRVYGGHTSPTFDN-NGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISG 667
Query: 297 SVPEVIGRLNKLEGLGLNVNKFSGLIPSSLGNLTILTRLWMEENRLEGSIP 347
S+P+ +G L L L L+ NK G IP ++ LT+LT + + N L G IP
Sbjct: 668 SIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIP 718
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 117/416 (28%), Positives = 161/416 (38%), Gaps = 66/416 (15%)
Query: 15 LNLTYNYLSGKIPT--NLSHCTELRSFEASVN--DFVGQIPNQLSSLTKLEIIGLGGSNL 70
L+L+ N LSG + T +L C+ L+ S N DF G++ L L LE++ L +++
Sbjct: 102 LDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLK-LNSLEVLDLSANSI 160
Query: 71 TG-NVPAWI--------------GNFSS----------LKALSLAWNNLRGSIPNELGQL 105
+G NV W+ GN S L+ L ++ NN IP LG
Sbjct: 161 SGANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIP-FLGDC 219
Query: 106 SGLGFFTLYGNFXXXXXXXXXXXXXXXXXXXVTQNQLHGQLPTDVGLTLPNLKIFAGAVN 165
S L + GN ++ NQ G +P L L +L+ + A N
Sbjct: 220 SALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPP---LPLKSLQYLSLAEN 276
Query: 166 YFTGSIPVSLSNASN-LQVLDFAENGLTGTIPGNFGSLKDLVRLNFDQNELGSREIGDLN 224
FTG IP LS A + L LD + N G +P FGS L L N S E+
Sbjct: 277 KFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNF-SGELPMDT 335
Query: 225 FLKFLANCTSLEVLGLARNSFGGEMPISIANLSTHL------------------------ 260
LK L+VL L+ N F GE+P S+ NLS L
Sbjct: 336 LLKMRG----LKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKN 391
Query: 261 --RRLTMGENLMHGNIPVXXXXXXXXXXXXXXXXXXXXSVPEVIGRLNKLEGLGLNVNKF 318
+ L + N G IP ++P +G L+KL L L +N
Sbjct: 392 TLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNML 451
Query: 319 SGLIPSSLGNLTILTRLWMEENRLEGSIPPSLGNCQKXXXXXXXXXXXXGTIPKEV 374
G IP L + L L ++ N L G IP L NC G IPK +
Sbjct: 452 EGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWI 507
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 125/297 (42%), Gaps = 24/297 (8%)
Query: 65 LGGSNLTGNVPAWIGNFSSLKALSLAWNNLRGSIPN--ELGQLSGLGFFTLYGN-FXXXX 121
L S++ G+V + + +SL +L L+ N+L G + LG SGL F + N
Sbjct: 81 LSNSHINGSVSGFKCS-ASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPG 139
Query: 122 XXXXXXXXXXXXXXXVTQNQLHGQLPTDVGLTLPN----LKIFAGAVNYFTGSIPVSLSN 177
++ N + G VG L + LK A + N +G + VS
Sbjct: 140 KVSGGLKLNSLEVLDLSANSISGA--NVVGWVLSDGCGELKHLAISGNKISGDVDVS--R 195
Query: 178 ASNLQVLDFAENGLTGTIPGNFGSLKDLVRLNFDQNELGSREIGDLNFLKFLANCTSLEV 237
NL+ LD + N + IP G L L+ N+L GD F + ++ CT L++
Sbjct: 196 CVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLS----GD--FSRAISTCTELKL 248
Query: 238 LGLARNSFGGEMPISIANLSTHLRRLTMGENLMHGNIP-VXXXXXXXXXXXXXXXXXXXX 296
L ++ N F G PI L + L+ L++ EN G IP
Sbjct: 249 LNISSNQFVG--PIPPLPLKS-LQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYG 305
Query: 297 SVPEVIGRLNKLEGLGLNVNKFSGLIP-SSLGNLTILTRLWMEENRLEGSIPPSLGN 352
+VP G + LE L L+ N FSG +P +L + L L + N G +P SL N
Sbjct: 306 AVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTN 362
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
Query: 311 LGLNVNKFSGLIPSSLGNLTILTRLWMEENRLEGSIPPSLGNCQKXXXXXXXXXXXXGTI 370
L ++ N SG IP +G++ L L + N + GSIP +G+ + G I
Sbjct: 634 LDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRI 693
Query: 371 PKEVRQSGMSYSDISKSTDNFS 392
P+ + M ++I S +N S
Sbjct: 694 PQAMSALTM-LTEIDLSNNNLS 714
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 75/222 (33%), Positives = 119/222 (53%), Gaps = 17/222 (7%)
Query: 383 DISKSTDNFSKENLIGTGSFGSVYKGTLGDGTIVAIKVLKLQQQGALKSFIDECNALKST 442
D+ ++T+NF + LIG G FG VYKG L DG VA+K + ++ F E L
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC 92
Query: 443 RHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNI 502
RH +++ +I C E N+ L++++M NGNL + L+ S +S QRL I
Sbjct: 93 RHPHLVSLIGFCD----ERNEM-ILIYKYMENGNLKRHLYGSDLPTMS---MSWEQRLEI 144
Query: 503 AIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQT 562
I A L YLH I H D+K N+LLD++ + DFG++K E+
Sbjct: 145 CIGAARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQT-----H 196
Query: 563 VSIGLKGSIGYIPPEH-MNGQVSILGDIYSYGILLLEMFTGK 603
+ +KG++GYI PE+ + G+++ D+YS+G++L E+ +
Sbjct: 197 LXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCAR 238
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 82/231 (35%), Positives = 119/231 (51%), Gaps = 34/231 (14%)
Query: 397 IGTGSFGSVYKGTL-GDGTIVAIKVLKLQ----QQGALKSFIDECNALKSTRHRNILRVI 451
IG+GSFG+VYKG GD VA+K+L + QQ L++F +E L+ TRH NIL +
Sbjct: 20 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQ--LQAFKNEVGVLRKTRHVNILLFM 74
Query: 452 TACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALD 511
+ L A+V ++ +L LH S + ++ KKL ++IA A +D
Sbjct: 75 GYSTKPQL------AIVTQWCEGSSLYHHLHASETK-FEMKKL-----IDIARQTARGMD 122
Query: 512 YLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSI 571
YLH I H DLK +N+ L +D T +GDFGLA S + Q L GSI
Sbjct: 123 YLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQ-----LSGSI 174
Query: 572 GYIPPEHMNGQ----VSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHM 618
++ PE + Q S D+Y++GI+L E+ TG+ P ++ D I M
Sbjct: 175 LWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEM 225
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 82/231 (35%), Positives = 120/231 (51%), Gaps = 34/231 (14%)
Query: 397 IGTGSFGSVYKGTL-GDGTIVAIKVLKLQ----QQGALKSFIDECNALKSTRHRNILRVI 451
IG+GSFG+VYKG GD VA+K+L + QQ L++F +E L+ TRH NIL +
Sbjct: 32 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQ--LQAFKNEVGVLRKTRHVNILLFM 86
Query: 452 TACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALD 511
++ L A+V ++ +L LH S + ++ KKL ++IA A +D
Sbjct: 87 GYSTAPQL------AIVTQWCEGSSLYHHLHASETK-FEMKKL-----IDIARQTARGMD 134
Query: 512 YLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSI 571
YLH I H DLK +N+ L +D T +GDFGLA S + Q L GSI
Sbjct: 135 YLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQ-----LSGSI 186
Query: 572 GYIPPEHMNGQ----VSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHM 618
++ PE + Q S D+Y++GI+L E+ TG+ P ++ D I M
Sbjct: 187 LWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEM 237
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/231 (35%), Positives = 119/231 (51%), Gaps = 34/231 (14%)
Query: 397 IGTGSFGSVYKGTL-GDGTIVAIKVLKLQ----QQGALKSFIDECNALKSTRHRNILRVI 451
IG+GSFG+VYKG GD VA+K+L + QQ L++F +E L+ TRH NIL +
Sbjct: 32 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQ--LQAFKNEVGVLRKTRHVNILLFM 86
Query: 452 TACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALD 511
+ L A+V ++ +L LH S + ++ KKL ++IA A +D
Sbjct: 87 GYSTKPQL------AIVTQWCEGSSLYHHLHASETK-FEMKKL-----IDIARQTARGMD 134
Query: 512 YLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSI 571
YLH I H DLK +N+ L +D T +GDFGLA S + Q L GSI
Sbjct: 135 YLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQ-----LSGSI 186
Query: 572 GYIPPEHMNGQ----VSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHM 618
++ PE + Q S D+Y++GI+L E+ TG+ P ++ D I M
Sbjct: 187 LWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEM 237
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/231 (34%), Positives = 118/231 (51%), Gaps = 34/231 (14%)
Query: 397 IGTGSFGSVYKGTL-GDGTIVAIKVLKLQ----QQGALKSFIDECNALKSTRHRNILRVI 451
IG+GSFG+VYKG GD VA+K+L + QQ L++F +E L+ TRH NIL +
Sbjct: 16 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQ--LQAFKNEVGVLRKTRHVNILLFM 70
Query: 452 TACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALD 511
++ L A+V ++ +L LH K +I+ ++IA A +D
Sbjct: 71 GYSTAPQL------AIVTQWCEGSSLYHHLHIIET------KFEMIKLIDIARQTAQGMD 118
Query: 512 YLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSI 571
YLH I H DLK +N+ L +D+T +GDFGLA S + Q L GSI
Sbjct: 119 YLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ-----LSGSI 170
Query: 572 GYIPPEHMNGQ----VSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHM 618
++ PE + Q S D+Y++GI+L E+ TG+ P ++ D I M
Sbjct: 171 LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFM 221
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/231 (34%), Positives = 117/231 (50%), Gaps = 34/231 (14%)
Query: 397 IGTGSFGSVYKGTL-GDGTIVAIKVLKLQ----QQGALKSFIDECNALKSTRHRNILRVI 451
IG+GSFG+VYKG GD VA+K+L + QQ L++F +E L+ TRH NIL +
Sbjct: 16 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQ--LQAFKNEVGVLRKTRHVNILLFM 70
Query: 452 TACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALD 511
+ L A+V ++ +L LH K +I+ ++IA A +D
Sbjct: 71 GYSTKPQL------AIVTQWCEGSSLYHHLHIIET------KFEMIKLIDIARQTAQGMD 118
Query: 512 YLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSI 571
YLH I H DLK +N+ L +D+T +GDFGLA S + Q L GSI
Sbjct: 119 YLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ-----LSGSI 170
Query: 572 GYIPPEHMNGQ----VSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHM 618
++ PE + Q S D+Y++GI+L E+ TG+ P ++ D I M
Sbjct: 171 LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFM 221
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/237 (31%), Positives = 124/237 (52%), Gaps = 21/237 (8%)
Query: 376 QSGMSYSDISKSTDNFSKENLIGTGSFGSVYKGTLGDGTIVAIKVLKLQQQGA--LKSFI 433
Q M D+ + + + IG GSFG+V++ G+ VA+K+L Q A + F+
Sbjct: 24 QGAMDGDDMDIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFL 82
Query: 434 DECNALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKK 493
E +K RH NI+ + A + ++V E++S G+L + LH S A ++
Sbjct: 83 REVAIMKRLRHPNIVLFMGAVTQ-----PPNLSIVTEYLSRGSLYRLLHKSGAR----EQ 133
Query: 494 LSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEI 553
L +RL++A DVA ++YLH+ + PI H DLK N+L+DK T V DFGL++
Sbjct: 134 LDERRRLSMAYDVAKGMNYLHNR-NPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRL---- 188
Query: 554 SDNPSKNQTVSIGLKGSIGYIPPEHMNGQVS-ILGDIYSYGILLLEMFTGKRPTGDM 609
+ S G+ ++ PE + + S D+YS+G++L E+ T ++P G++
Sbjct: 189 ---KASXFLXSKXAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNL 242
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 80/231 (34%), Positives = 117/231 (50%), Gaps = 34/231 (14%)
Query: 397 IGTGSFGSVYKGTL-GDGTIVAIKVLKLQ----QQGALKSFIDECNALKSTRHRNILRVI 451
IG+GSFG+VYKG GD VA+K+L + QQ L++F +E L+ TRH NIL +
Sbjct: 21 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQ--LQAFKNEVGVLRKTRHVNILLFM 75
Query: 452 TACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALD 511
+ L A+V ++ +L LH K +I+ ++IA A +D
Sbjct: 76 GYSTKPQL------AIVTQWCEGSSLYHHLHIIET------KFEMIKLIDIARQTAQGMD 123
Query: 512 YLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSI 571
YLH I H DLK +N+ L +D+T +GDFGLA S + Q L GSI
Sbjct: 124 YLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ-----LSGSI 175
Query: 572 GYIPPEHMNGQ----VSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHM 618
++ PE + Q S D+Y++GI+L E+ TG+ P ++ D I M
Sbjct: 176 LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFM 226
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 80/231 (34%), Positives = 117/231 (50%), Gaps = 34/231 (14%)
Query: 397 IGTGSFGSVYKGTL-GDGTIVAIKVLKLQ----QQGALKSFIDECNALKSTRHRNILRVI 451
IG+GSFG+VYKG GD VA+K+L + QQ L++F +E L+ TRH NIL +
Sbjct: 18 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQ--LQAFKNEVGVLRKTRHVNILLFM 72
Query: 452 TACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALD 511
+ L A+V ++ +L LH K +I+ ++IA A +D
Sbjct: 73 GYSTKPQL------AIVTQWCEGSSLYHHLHIIET------KFEMIKLIDIARQTAQGMD 120
Query: 512 YLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSI 571
YLH I H DLK +N+ L +D+T +GDFGLA S + Q L GSI
Sbjct: 121 YLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ-----LSGSI 172
Query: 572 GYIPPEHMNGQ----VSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHM 618
++ PE + Q S D+Y++GI+L E+ TG+ P ++ D I M
Sbjct: 173 LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFM 223
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 80/231 (34%), Positives = 117/231 (50%), Gaps = 34/231 (14%)
Query: 397 IGTGSFGSVYKGTL-GDGTIVAIKVLKLQ----QQGALKSFIDECNALKSTRHRNILRVI 451
IG+GSFG+VYKG GD VA+K+L + QQ L++F +E L+ TRH NIL +
Sbjct: 44 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQ--LQAFKNEVGVLRKTRHVNILLFM 98
Query: 452 TACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALD 511
+ L A+V ++ +L LH K +I+ ++IA A +D
Sbjct: 99 GYSTKPQL------AIVTQWCEGSSLYHHLHIIET------KFEMIKLIDIARQTAQGMD 146
Query: 512 YLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSI 571
YLH I H DLK +N+ L +D+T +GDFGLA S + Q L GSI
Sbjct: 147 YLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ-----LSGSI 198
Query: 572 GYIPPEHMNGQ----VSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHM 618
++ PE + Q S D+Y++GI+L E+ TG+ P ++ D I M
Sbjct: 199 LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFM 249
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 80/231 (34%), Positives = 117/231 (50%), Gaps = 34/231 (14%)
Query: 397 IGTGSFGSVYKGTL-GDGTIVAIKVLKLQ----QQGALKSFIDECNALKSTRHRNILRVI 451
IG+GSFG+VYKG GD VA+K+L + QQ L++F +E L+ TRH NIL +
Sbjct: 43 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQ--LQAFKNEVGVLRKTRHVNILLFM 97
Query: 452 TACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALD 511
+ L A+V ++ +L LH K +I+ ++IA A +D
Sbjct: 98 GYSTKPQL------AIVTQWCEGSSLYHHLHIIET------KFEMIKLIDIARQTAQGMD 145
Query: 512 YLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSI 571
YLH I H DLK +N+ L +D+T +GDFGLA S + Q L GSI
Sbjct: 146 YLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ-----LSGSI 197
Query: 572 GYIPPEHMNGQ----VSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHM 618
++ PE + Q S D+Y++GI+L E+ TG+ P ++ D I M
Sbjct: 198 LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFM 248
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 80/231 (34%), Positives = 117/231 (50%), Gaps = 34/231 (14%)
Query: 397 IGTGSFGSVYKGTL-GDGTIVAIKVLKLQ----QQGALKSFIDECNALKSTRHRNILRVI 451
IG+GSFG+VYKG GD VA+K+L + QQ L++F +E L+ TRH NIL +
Sbjct: 21 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQ--LQAFKNEVGVLRKTRHVNILLFM 75
Query: 452 TACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALD 511
+ L A+V ++ +L LH K +I+ ++IA A +D
Sbjct: 76 GYSTKPQL------AIVTQWCEGSSLYHHLHIIET------KFEMIKLIDIARQTAQGMD 123
Query: 512 YLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSI 571
YLH I H DLK +N+ L +D+T +GDFGLA S + Q L GSI
Sbjct: 124 YLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ-----LSGSI 175
Query: 572 GYIPPEHMNGQ----VSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHM 618
++ PE + Q S D+Y++GI+L E+ TG+ P ++ D I M
Sbjct: 176 LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFM 226
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 77/229 (33%), Positives = 114/229 (49%), Gaps = 30/229 (13%)
Query: 397 IGTGSFGSVYKGTL-GDGTIVAIKVLKL--QQQGALKSFIDECNALKSTRHRNILRVITA 453
IG+GSFG+VYKG GD VA+K+LK+ ++F +E L+ TRH NIL +
Sbjct: 44 IGSGSFGTVYKGKWHGD---VAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGY 100
Query: 454 CSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYL 513
+ +L A+V ++ +L + LH Q K + Q ++IA A +DYL
Sbjct: 101 MTKDNL------AIVTQWCEGSSLYKHLH------VQETKFQMFQLIDIARQTAQGMDYL 148
Query: 514 HHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGY 573
H I H D+K +N+ L + +T +GDFGLA S + Q GS+ +
Sbjct: 149 H---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPT-----GSVLW 200
Query: 574 IPPEHMNGQ----VSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHM 618
+ PE + Q S D+YSYGI+L E+ TG+ P + D I M
Sbjct: 201 MAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFM 249
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 80/231 (34%), Positives = 117/231 (50%), Gaps = 34/231 (14%)
Query: 397 IGTGSFGSVYKGTL-GDGTIVAIKVLKLQ----QQGALKSFIDECNALKSTRHRNILRVI 451
IG+GSFG+VYKG GD VA+K+L + QQ L++F +E L+ TRH NIL +
Sbjct: 36 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQ--LQAFKNEVGVLRKTRHVNILLFM 90
Query: 452 TACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALD 511
+ L A+V ++ +L LH K +I+ ++IA A +D
Sbjct: 91 GYSTKPQL------AIVTQWCEGSSLYHHLHIIET------KFEMIKLIDIARQTAQGMD 138
Query: 512 YLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSI 571
YLH I H DLK +N+ L +D+T +GDFGLA S + Q L GSI
Sbjct: 139 YLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQ-----LSGSI 190
Query: 572 GYIPPEHMNGQ----VSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHM 618
++ PE + Q S D+Y++GI+L E+ TG+ P ++ D I M
Sbjct: 191 LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFM 241
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 80/231 (34%), Positives = 117/231 (50%), Gaps = 34/231 (14%)
Query: 397 IGTGSFGSVYKGTL-GDGTIVAIKVLKLQ----QQGALKSFIDECNALKSTRHRNILRVI 451
IG+GSFG+VYKG GD VA+K+L + QQ L++F +E L+ TRH NIL +
Sbjct: 44 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQ--LQAFKNEVGVLRKTRHVNILLFM 98
Query: 452 TACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALD 511
+ L A+V ++ +L LH K +I+ ++IA A +D
Sbjct: 99 GYSTKPQL------AIVTQWCEGSSLYHHLHIIET------KFEMIKLIDIARQTAQGMD 146
Query: 512 YLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSI 571
YLH I H DLK +N+ L +D+T +GDFGLA S + Q L GSI
Sbjct: 147 YLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQ-----LSGSI 198
Query: 572 GYIPPEHMNGQ----VSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHM 618
++ PE + Q S D+Y++GI+L E+ TG+ P ++ D I M
Sbjct: 199 LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFM 249
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 80/231 (34%), Positives = 117/231 (50%), Gaps = 34/231 (14%)
Query: 397 IGTGSFGSVYKGTL-GDGTIVAIKVLKLQ----QQGALKSFIDECNALKSTRHRNILRVI 451
IG+GSFG+VYKG GD VA+K+L + QQ L++F +E L+ TRH NIL +
Sbjct: 16 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQ--LQAFKNEVGVLRKTRHVNILLFM 70
Query: 452 TACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALD 511
+ L A+V ++ +L LH K +I+ ++IA A +D
Sbjct: 71 GYSTKPQL------AIVTQWCEGSSLYHHLHIIET------KFEMIKLIDIARQTAQGMD 118
Query: 512 YLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSI 571
YLH I H DLK +N+ L +D+T +GDFGLA S + Q L GSI
Sbjct: 119 YLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQ-----LSGSI 170
Query: 572 GYIPPEHMNGQ----VSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHM 618
++ PE + Q S D+Y++GI+L E+ TG+ P ++ D I M
Sbjct: 171 LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFM 221
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 75/239 (31%), Positives = 125/239 (52%), Gaps = 25/239 (10%)
Query: 376 QSGMSYSDISKSTDNFSKENLIGTGSFGSVYKGTLGDGTIVAIKVLKLQQQGA--LKSFI 433
Q M D+ + + + IG GSFG+V++ G+ VA+K+L Q A + F+
Sbjct: 24 QGAMDGDDMDIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFL 82
Query: 434 DECNALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKK 493
E +K RH NI+ + A + ++V E++S G+L + LH S A ++
Sbjct: 83 REVAIMKRLRHPNIVLFMGAVTQ-----PPNLSIVTEYLSRGSLYRLLHKSGAR----EQ 133
Query: 494 LSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEI 553
L +RL++A DVA ++YLH+ + PI H +LK N+L+DK T V DFGL++
Sbjct: 134 LDERRRLSMAYDVAKGMNYLHNR-NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRL---- 188
Query: 554 SDNPSKNQTV--SIGLKGSIGYIPPEHMNGQVS-ILGDIYSYGILLLEMFTGKRPTGDM 609
K T S G+ ++ PE + + S D+YS+G++L E+ T ++P G++
Sbjct: 189 -----KASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNL 242
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 124/244 (50%), Gaps = 36/244 (14%)
Query: 373 EVRQSGMSYSDISKSTDNFSKE------NLIGTGSFGSVYKGTLGDGTIVAIK---VLKL 423
+ R S+ ++ T+NF + N +G G FG VYKG + + T+ K ++ +
Sbjct: 9 DTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDI 68
Query: 424 QQQGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNL-DQ--W 480
+ + F E + +H N++ ++ S +G+D LV+ +M NG+L D+
Sbjct: 69 TTEELKQQFDQEIKVMAKCQHENLVELLGFSS----DGDDL-CLVYVYMPNGSLLDRLSC 123
Query: 481 LHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLH--HHCDTPIAHCDLKPSNVLLDKDMT 538
L +P LS R IA A+ +++LH HH H D+K +N+LLD+ T
Sbjct: 124 LDGTPP-------LSWHMRCKIAQGAANGINFLHENHHI-----HRDIKSANILLDEAFT 171
Query: 539 AHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNGQVSILGDIYSYGILLLE 598
A + DFGLA+ + + ++ V G+ Y+ PE + G+++ DIYS+G++LLE
Sbjct: 172 AKISDFGLARASEKFAQTVMXSRIV-----GTTAYMAPEALRGEITPKSDIYSFGVVLLE 226
Query: 599 MFTG 602
+ TG
Sbjct: 227 IITG 230
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 123/244 (50%), Gaps = 36/244 (14%)
Query: 373 EVRQSGMSYSDISKSTDNFSKE------NLIGTGSFGSVYKGTLGDGTIVAIK---VLKL 423
+ R S+ ++ T+NF + N +G G FG VYKG + + T+ K ++ +
Sbjct: 9 DTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDI 68
Query: 424 QQQGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNL-DQ--W 480
+ + F E + +H N++ ++ S +G+D LV+ +M NG+L D+
Sbjct: 69 TTEELKQQFDQEIKVMAKCQHENLVELLGFSS----DGDDL-CLVYVYMPNGSLLDRLSC 123
Query: 481 LHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLH--HHCDTPIAHCDLKPSNVLLDKDMT 538
L +P LS R IA A+ +++LH HH H D+K +N+LLD+ T
Sbjct: 124 LDGTPP-------LSWHMRCKIAQGAANGINFLHENHHI-----HRDIKSANILLDEAFT 171
Query: 539 AHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNGQVSILGDIYSYGILLLE 598
A + DFGLA+ + + + V G+ Y+ PE + G+++ DIYS+G++LLE
Sbjct: 172 AKISDFGLARASEKFAQTVMXXRIV-----GTTAYMAPEALRGEITPKSDIYSFGVVLLE 226
Query: 599 MFTG 602
+ TG
Sbjct: 227 IITG 230
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 122/244 (50%), Gaps = 36/244 (14%)
Query: 373 EVRQSGMSYSDISKSTDNFSKE------NLIGTGSFGSVYKGTLGDGTIVAIK---VLKL 423
+ R S+ ++ T+NF + N +G G FG VYKG + + T+ K ++ +
Sbjct: 3 DTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDI 62
Query: 424 QQQGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNL-DQ--W 480
+ + F E + +H N++ ++ S +G+D LV+ +M NG+L D+
Sbjct: 63 TTEELKQQFDQEIKVMAKCQHENLVELLGFSS----DGDDL-CLVYVYMPNGSLLDRLSC 117
Query: 481 LHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLH--HHCDTPIAHCDLKPSNVLLDKDMT 538
L +P LS R IA A+ +++LH HH H D+K +N+LLD+ T
Sbjct: 118 LDGTPP-------LSWHMRCKIAQGAANGINFLHENHHI-----HRDIKSANILLDEAFT 165
Query: 539 AHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNGQVSILGDIYSYGILLLE 598
A + DFGLA+ + + + G+ Y+ PE + G+++ DIYS+G++LLE
Sbjct: 166 AKISDFGLAR-----ASEKFAQXVMXXRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLE 220
Query: 599 MFTG 602
+ TG
Sbjct: 221 IITG 224
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/231 (32%), Positives = 115/231 (49%), Gaps = 31/231 (13%)
Query: 394 ENLIGTGSFGSVYKGTLG----DGTIVAIKVLKL-QQQGALKSFIDECNALKSTRHRNIL 448
E +IG G FG V +G L + VAIK LK + + F+ E + + H NI+
Sbjct: 21 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNII 80
Query: 449 RVITACSSVDLEG---NDFKALVF-EFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAI 504
R LEG N ++ EFM NG LD +L + + +VIQ + +
Sbjct: 81 R---------LEGVVTNSMPVMILTEFMENGALDSFLRLNDGQ------FTVIQLVGMLR 125
Query: 505 DVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVS 564
+AS + YL + H DL N+L++ ++ V DFGL++FL E S +P+ +T S
Sbjct: 126 GIASGMRYL---AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPT--ETSS 180
Query: 565 IGLKGSIGYIPPEHMN-GQVSILGDIYSYGILLLEMFT-GKRPTGDMFKDD 613
+G K I + PE + + + D +SYGI++ E+ + G+RP DM D
Sbjct: 181 LGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQD 231
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 113/234 (48%), Gaps = 31/234 (13%)
Query: 379 MSYSDISKSTDNFSKENL-----IGTGSFGSVYKGTLGDGTIVAIKVLKLQQQGAL--KS 431
M ++K +E+L +G G FG V+ GT T VAIK LK G + ++
Sbjct: 3 MQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMSPEA 59
Query: 432 FIDECNALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQF 491
F+ E +K RH ++++ S + +V E+MS G+L +L
Sbjct: 60 FLQEAQVMKKLRHEKLVQLYAVVSEEPI------YIVIEYMSKGSLLDFLKGEMG----- 108
Query: 492 KKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLF 551
K L + Q +++A +AS + Y+ H DL+ +N+L+ +++ V DFGLA+
Sbjct: 109 KYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARL-- 163
Query: 552 EISDNPSKNQTVSIGLKGSIGYIPPE-HMNGQVSILGDIYSYGILLLEMFTGKR 604
I DN T G K I + PE + G+ +I D++S+GILL E+ T R
Sbjct: 164 -IEDN---EXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 74/231 (32%), Positives = 114/231 (49%), Gaps = 31/231 (13%)
Query: 394 ENLIGTGSFGSVYKGTLG----DGTIVAIKVLKL-QQQGALKSFIDECNALKSTRHRNIL 448
E +IG G FG V +G L + VAIK LK + + F+ E + + H NI+
Sbjct: 19 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNII 78
Query: 449 RVITACSSVDLEG---NDFKALVF-EFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAI 504
R LEG N ++ EFM NG LD +L + + +VIQ + +
Sbjct: 79 R---------LEGVVTNSMPVMILTEFMENGALDSFLRLNDGQ------FTVIQLVGMLR 123
Query: 505 DVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVS 564
+AS + YL + H DL N+L++ ++ V DFGL++FL E S +P+ T S
Sbjct: 124 GIASGMRYL---AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPT--YTSS 178
Query: 565 IGLKGSIGYIPPEHMN-GQVSILGDIYSYGILLLEMFT-GKRPTGDMFKDD 613
+G K I + PE + + + D +SYGI++ E+ + G+RP DM D
Sbjct: 179 LGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQD 229
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 113/234 (48%), Gaps = 31/234 (13%)
Query: 379 MSYSDISKSTDNFSKENL-----IGTGSFGSVYKGTLGDGTIVAIKVLKLQQQGAL--KS 431
M ++K +E+L +G G FG V+ GT T VAIK LK G + ++
Sbjct: 3 MQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMSPEA 59
Query: 432 FIDECNALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQF 491
F+ E +K RH ++++ S + +V E+MS G+L +L
Sbjct: 60 FLQEAQVMKKLRHEKLVQLYAVVSEEPI------YIVIEYMSKGSLLDFLKGEMG----- 108
Query: 492 KKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLF 551
K L + Q +++A +AS + Y+ H DL+ +N+L+ +++ V DFGLA+
Sbjct: 109 KYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARL-- 163
Query: 552 EISDNPSKNQTVSIGLKGSIGYIPPE-HMNGQVSILGDIYSYGILLLEMFTGKR 604
I DN T G K I + PE + G+ +I D++S+GILL E+ T R
Sbjct: 164 -IEDN---EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 113/234 (48%), Gaps = 31/234 (13%)
Query: 379 MSYSDISKSTDNFSKENL-----IGTGSFGSVYKGTLGDGTIVAIKVLKLQQQGAL--KS 431
M ++K +E+L +G G FG V+ GT T VAIK LK G + ++
Sbjct: 3 MQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMSPEA 59
Query: 432 FIDECNALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQF 491
F+ E +K RH ++++ S + +V E+MS G+L +L
Sbjct: 60 FLQEAQVMKKIRHEKLVQLYAVVSEEPI------YIVTEYMSKGSLLDFLKGEMG----- 108
Query: 492 KKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLF 551
K L + Q +++A +AS + Y+ H DL+ +N+L+ +++ V DFGLA+
Sbjct: 109 KYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARL-- 163
Query: 552 EISDNPSKNQTVSIGLKGSIGYIPPE-HMNGQVSILGDIYSYGILLLEMFTGKR 604
I DN T G K I + PE + G+ +I D++S+GILL E+ T R
Sbjct: 164 -IEDN---EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 113/234 (48%), Gaps = 31/234 (13%)
Query: 379 MSYSDISKSTDNFSKENL-----IGTGSFGSVYKGTLGDGTIVAIKVLKLQQQGAL--KS 431
M ++K +E+L +G G FG V+ GT T VAIK LK G + ++
Sbjct: 3 MQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMSPEA 59
Query: 432 FIDECNALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQF 491
F+ E +K RH ++++ S + +V E+MS G+L +L
Sbjct: 60 FLQEAQVMKKLRHEKLVQLYAVVSEEPI------YIVCEYMSKGSLLDFLKGEMG----- 108
Query: 492 KKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLF 551
K L + Q +++A +AS + Y+ H DL+ +N+L+ +++ V DFGLA+
Sbjct: 109 KYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARL-- 163
Query: 552 EISDNPSKNQTVSIGLKGSIGYIPPE-HMNGQVSILGDIYSYGILLLEMFTGKR 604
I DN T G K I + PE + G+ +I D++S+GILL E+ T R
Sbjct: 164 -IEDN---EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 106/211 (50%), Gaps = 26/211 (12%)
Query: 397 IGTGSFGSVYKGTLGDGTIVAIKVLKLQQQGAL--KSFIDECNALKSTRHRNILRVITAC 454
+G G FG V+ GT T VAIK LK G + ++F+ E +K RH ++++
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 72
Query: 455 SSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLH 514
S + +V E+MS G+L +L ++ L + Q +++A +AS + Y+
Sbjct: 73 SEEPI------XIVTEYMSKGSLLDFLKGETGKY-----LRLPQLVDMAAQIASGMAYVE 121
Query: 515 HHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYI 574
H DL+ +N+L+ +++ V DFGLA+ I DN T G K I +
Sbjct: 122 R---MNYVHRDLRAANILVGENLVCKVADFGLARL---IEDN---EXTARQGAKFPIKWT 172
Query: 575 PPE-HMNGQVSILGDIYSYGILLLEMFTGKR 604
PE + G+ +I D++S+GILL E+ T R
Sbjct: 173 APEAALYGRFTIKSDVWSFGILLTELTTKGR 203
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 113/234 (48%), Gaps = 31/234 (13%)
Query: 379 MSYSDISKSTDNFSKENL-----IGTGSFGSVYKGTLGDGTIVAIKVLKLQQQGAL--KS 431
M ++K +E+L +G G FG V+ GT T VAIK LK G + ++
Sbjct: 3 MQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMSPEA 59
Query: 432 FIDECNALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQF 491
F+ E +K RH ++++ S + +V E+MS G+L +L
Sbjct: 60 FLQEAQVMKKLRHEKLVQLYAVVSEEPI------YIVTEYMSKGSLLDFLKGEMG----- 108
Query: 492 KKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLF 551
K L + Q +++A +AS + Y+ H DL+ +N+L+ +++ V DFGLA+
Sbjct: 109 KYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARL-- 163
Query: 552 EISDNPSKNQTVSIGLKGSIGYIPPE-HMNGQVSILGDIYSYGILLLEMFTGKR 604
I DN T G K I + PE + G+ +I D++S+GILL E+ T R
Sbjct: 164 -IEDN---EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 113/229 (49%), Gaps = 31/229 (13%)
Query: 384 ISKSTDNFSKENL-----IGTGSFGSVYKGTLGDGTIVAIKVLKLQQQGAL--KSFIDEC 436
++K +E+L +G G FG V+ GT T VAIK LK G + ++F+ E
Sbjct: 1 LAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMSPEAFLQEA 57
Query: 437 NALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSV 496
+K RH ++++ S + +V E+MS G+L +L ++ L +
Sbjct: 58 QVMKKLRHEKLVQLYAVVSEEPI------YIVTEYMSKGSLLDFLKGETGKY-----LRL 106
Query: 497 IQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDN 556
Q +++A +AS + Y+ H DL+ +N+L+ +++ V DFGLA+ I DN
Sbjct: 107 PQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARL---IEDN 160
Query: 557 PSKNQTVSIGLKGSIGYIPPE-HMNGQVSILGDIYSYGILLLEMFTGKR 604
T G K I + PE + G+ +I D++S+GILL E+ T R
Sbjct: 161 ---EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 206
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 112/234 (47%), Gaps = 31/234 (13%)
Query: 379 MSYSDISKSTDNFSKENL-----IGTGSFGSVYKGTLGDGTIVAIKVLKLQQQGAL--KS 431
M ++K +E+L +G G FG V+ GT T VAIK LK G + ++
Sbjct: 3 MQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMSPEA 59
Query: 432 FIDECNALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQF 491
F+ E +K RH ++++ S + +V E+MS G L +L
Sbjct: 60 FLQEAQVMKKLRHEKLVQLYAVVSEEPI------YIVMEYMSKGCLLDFLKGEMG----- 108
Query: 492 KKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLF 551
K L + Q +++A +AS + Y+ H DL+ +N+L+ +++ V DFGLA+
Sbjct: 109 KYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARL-- 163
Query: 552 EISDNPSKNQTVSIGLKGSIGYIPPE-HMNGQVSILGDIYSYGILLLEMFTGKR 604
I DN T G K I + PE + G+ +I D++S+GILL E+ T R
Sbjct: 164 -IEDN---EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 119/242 (49%), Gaps = 36/242 (14%)
Query: 375 RQSGMSYSDISKSTDNFSKE------NLIGTGSFGSVYKGTLGDGTIVAIK---VLKLQQ 425
R S+ ++ T+NF + N G G FG VYKG + + T+ K ++ +
Sbjct: 2 RFHSFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITT 61
Query: 426 QGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNL-DQ--WLH 482
+ + F E +H N++ ++ S +G+D LV+ + NG+L D+ L
Sbjct: 62 EELKQQFDQEIKVXAKCQHENLVELLGFSS----DGDDL-CLVYVYXPNGSLLDRLSCLD 116
Query: 483 PSPAEHYQFKKLSVIQRLNIAIDVASALDYLH--HHCDTPIAHCDLKPSNVLLDKDMTAH 540
+P LS R IA A+ +++LH HH H D+K +N+LLD+ TA
Sbjct: 117 GTPP-------LSWHXRCKIAQGAANGINFLHENHHI-----HRDIKSANILLDEAFTAK 164
Query: 541 VGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNGQVSILGDIYSYGILLLEMF 600
+ DFGLA+ + + ++ V G+ Y PE + G+++ DIYS+G++LLE+
Sbjct: 165 ISDFGLARASEKFAQXVXXSRIV-----GTTAYXAPEALRGEITPKSDIYSFGVVLLEII 219
Query: 601 TG 602
TG
Sbjct: 220 TG 221
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 106/214 (49%), Gaps = 26/214 (12%)
Query: 394 ENLIGTGSFGSVYKGTLGDGTIVAIKVLKLQQQGAL--KSFIDECNALKSTRHRNILRVI 451
E +G G FG V+ GT T VAIK LK G + ++F+ E +K RH ++++
Sbjct: 189 EVKLGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLY 245
Query: 452 TACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALD 511
S + +V E+MS G+L +L K L + Q +++A +AS +
Sbjct: 246 AVVSEEPI------YIVTEYMSKGSLLDFLKGETG-----KYLRLPQLVDMAAQIASGMA 294
Query: 512 YLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSI 571
Y+ H DL+ +N+L+ +++ V DFGLA+ I DN T G K I
Sbjct: 295 YVER---MNYVHRDLRAANILVGENLVCKVADFGLARL---IEDN---EYTARQGAKFPI 345
Query: 572 GYIPPE-HMNGQVSILGDIYSYGILLLEMFTGKR 604
+ PE + G+ +I D++S+GILL E+ T R
Sbjct: 346 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 379
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 106/214 (49%), Gaps = 26/214 (12%)
Query: 394 ENLIGTGSFGSVYKGTLGDGTIVAIKVLKLQQQGAL--KSFIDECNALKSTRHRNILRVI 451
E +G G FG V+ GT T VAIK LK G + ++F+ E +K RH ++++
Sbjct: 189 EVKLGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLY 245
Query: 452 TACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALD 511
S + +V E+MS G+L +L K L + Q +++A +AS +
Sbjct: 246 AVVSEEPI------YIVTEYMSKGSLLDFLKGETG-----KYLRLPQLVDMAAQIASGMA 294
Query: 512 YLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSI 571
Y+ H DL+ +N+L+ +++ V DFGLA+ I DN T G K I
Sbjct: 295 YVER---MNYVHRDLRAANILVGENLVCKVADFGLARL---IEDN---EYTARQGAKFPI 345
Query: 572 GYIPPE-HMNGQVSILGDIYSYGILLLEMFTGKR 604
+ PE + G+ +I D++S+GILL E+ T R
Sbjct: 346 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 379
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 107/214 (50%), Gaps = 26/214 (12%)
Query: 394 ENLIGTGSFGSVYKGTLGDGTIVAIKVLKLQQQGAL--KSFIDECNALKSTRHRNILRVI 451
E +G G FG V+ GT T VAIK LK G + ++F+ E +K RH ++++
Sbjct: 12 EVKLGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLY 68
Query: 452 TACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALD 511
S + +V E+MS G+L +L ++ L + Q +++A +AS +
Sbjct: 69 AVVSEEPI------YIVTEYMSKGSLLDFLKGEMGKY-----LRLPQLVDMAAQIASGMA 117
Query: 512 YLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSI 571
Y+ H DL+ +N+L+ +++ V DFGLA+ I DN T G K I
Sbjct: 118 YVER---MNYVHRDLRAANILVGENLVCKVADFGLARL---IEDN---EYTARQGAKFPI 168
Query: 572 GYIPPE-HMNGQVSILGDIYSYGILLLEMFTGKR 604
+ PE + G+ +I D++S+GILL E+ T R
Sbjct: 169 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 202
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 112/234 (47%), Gaps = 31/234 (13%)
Query: 379 MSYSDISKSTDNFSKENL-----IGTGSFGSVYKGTLGDGTIVAIKVLKLQQQGAL--KS 431
M ++K +E+L +G G FG V+ GT T VAIK LK G + ++
Sbjct: 3 MQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMSPEA 59
Query: 432 FIDECNALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQF 491
F+ E +K RH ++++ S + +V E+MS G L +L
Sbjct: 60 FLQEAQVMKKLRHEKLVQLYAVVSEEPI------YIVTEYMSKGCLLDFLKGEMG----- 108
Query: 492 KKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLF 551
K L + Q +++A +AS + Y+ H DL+ +N+L+ +++ V DFGLA+
Sbjct: 109 KYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARL-- 163
Query: 552 EISDNPSKNQTVSIGLKGSIGYIPPE-HMNGQVSILGDIYSYGILLLEMFTGKR 604
I DN T G K I + PE + G+ +I D++S+GILL E+ T R
Sbjct: 164 -IEDN---EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 107/214 (50%), Gaps = 26/214 (12%)
Query: 394 ENLIGTGSFGSVYKGTLGDGTIVAIKVLKLQQQGAL--KSFIDECNALKSTRHRNILRVI 451
E +G G FG V+ GT T VAIK LK G + ++F+ E +K RH ++++
Sbjct: 14 EVKLGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLY 70
Query: 452 TACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALD 511
S + +V E+MS G+L +L ++ L + Q +++A +AS +
Sbjct: 71 AVVSEEPI------YIVTEYMSKGSLLDFLKGEMGKY-----LRLPQLVDMAAQIASGMA 119
Query: 512 YLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSI 571
Y+ H DL+ +N+L+ +++ V DFGLA+ I DN T G K I
Sbjct: 120 YVER---MNYVHRDLRAANILVGENLVCKVADFGLARL---IEDN---EYTARQGAKFPI 170
Query: 572 GYIPPE-HMNGQVSILGDIYSYGILLLEMFTGKR 604
+ PE + G+ +I D++S+GILL E+ T R
Sbjct: 171 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 204
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 106/214 (49%), Gaps = 26/214 (12%)
Query: 394 ENLIGTGSFGSVYKGTLGDGTIVAIKVLKLQQQGAL--KSFIDECNALKSTRHRNILRVI 451
E +G G FG V+ GT T VAIK LK G + ++F+ E +K RH ++++
Sbjct: 189 EVKLGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLY 245
Query: 452 TACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALD 511
S + +V E+MS G+L +L K L + Q +++A +AS +
Sbjct: 246 AVVSEEPI------YIVGEYMSKGSLLDFLKGETG-----KYLRLPQLVDMAAQIASGMA 294
Query: 512 YLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSI 571
Y+ H DL+ +N+L+ +++ V DFGLA+ I DN T G K I
Sbjct: 295 YVER---MNYVHRDLRAANILVGENLVCKVADFGLARL---IEDN---EYTARQGAKFPI 345
Query: 572 GYIPPE-HMNGQVSILGDIYSYGILLLEMFTGKR 604
+ PE + G+ +I D++S+GILL E+ T R
Sbjct: 346 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 379
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 125/253 (49%), Gaps = 38/253 (15%)
Query: 380 SYSDISKSTDNFSKE---------NLIGTGSFGSVYKGTL---GDGTI-VAIKVLKL-QQ 425
++ D +++ F+KE +IG G FG V G L G I VAIK LK
Sbjct: 15 TFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYT 74
Query: 426 QGALKSFIDECNALKSTRHRNILR---VITACSSVDLEGNDFKALVFEFMSNGNLDQWLH 482
+ + F+ E + + H N++ V+T + V ++ EFM NG+LD +L
Sbjct: 75 EKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPV--------MIITEFMENGSLDSFLR 126
Query: 483 PSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVG 542
+ + +VIQ + + +A+ + YL D H DL N+L++ ++ V
Sbjct: 127 QNDGQ------FTVIQLVGMLRGIAAGMKYL---ADMNYVHRDLAARNILVNSNLVCKVS 177
Query: 543 DFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMN-GQVSILGDIYSYGILLLEMFT 601
DFGL++FL + + +P+ T ++G K I + PE + + + D++SYGI++ E+ +
Sbjct: 178 DFGLSRFLEDDTSDPT--YTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS 235
Query: 602 -GKRPTGDMFKDD 613
G+RP DM D
Sbjct: 236 YGERPYWDMTNQD 248
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 112/234 (47%), Gaps = 31/234 (13%)
Query: 379 MSYSDISKSTDNFSKENL-----IGTGSFGSVYKGTLGDGTIVAIKVLKLQQQGAL--KS 431
M ++K +E+L +G G FG V+ GT T VAIK LK G + ++
Sbjct: 3 MQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMSPEA 59
Query: 432 FIDECNALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQF 491
F+ E +K RH ++++ S + +V E+MS G+L +L
Sbjct: 60 FLQEAQVMKKLRHEKLVQLYAVVSEEPI------YIVTEYMSKGSLLDFLKGEMG----- 108
Query: 492 KKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLF 551
K L + Q +++A +AS + Y+ H DL +N+L+ +++ V DFGLA+
Sbjct: 109 KYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLAAANILVGENLVCKVADFGLARL-- 163
Query: 552 EISDNPSKNQTVSIGLKGSIGYIPPE-HMNGQVSILGDIYSYGILLLEMFTGKR 604
I DN T G K I + PE + G+ +I D++S+GILL E+ T R
Sbjct: 164 -IEDN---EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 105/212 (49%), Gaps = 22/212 (10%)
Query: 394 ENLIGTGSFGSVYKGTLGDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRVITA 453
E +G G FG V+ GT T VAIK LK ++F+ E +K RH ++++
Sbjct: 272 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAV 330
Query: 454 CSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYL 513
S + +V E+MS G+L +L ++ L + Q +++A +AS + Y+
Sbjct: 331 VSEEPI------YIVTEYMSKGSLLDFLKGETGKY-----LRLPQLVDMAAQIASGMAYV 379
Query: 514 HHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGY 573
H DL+ +N+L+ +++ V DFGLA+ I DN T G K I +
Sbjct: 380 ERMN---YVHRDLRAANILVGENLVCKVADFGLARL---IEDN---EYTARQGAKFPIKW 430
Query: 574 IPPE-HMNGQVSILGDIYSYGILLLEMFTGKR 604
PE + G+ +I D++S+GILL E+ T R
Sbjct: 431 TAPEAALYGRFTIKSDVWSFGILLTELTTKGR 462
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 108/212 (50%), Gaps = 28/212 (13%)
Query: 397 IGTGSFGSVYKGTLGDGTIVAIKVLKLQQQGALK--SFIDECNALKSTRHRNILRVITAC 454
+G G FG V+ G T VA+K LK QG++ +F+ E N +K +H+ ++R+
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLK---QGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 83
Query: 455 SSVDLEGNDFKALVFEFMSNGNLDQWLH-PSPAEHYQFKKLSVIQRLNIAIDVASALDYL 513
+ + ++ E+M NG+L +L PS KL++ + L++A +A + ++
Sbjct: 84 TQEPI------YIITEYMENGSLVDFLKTPSGI------KLTINKLLDMAAQIAEGMAFI 131
Query: 514 HHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGY 573
H DL+ +N+L+ ++ + DFGLA+ I DN T G K I +
Sbjct: 132 EERN---YIHRDLRAANILVSDTLSCKIADFGLARL---IEDN---EXTAREGAKFPIKW 182
Query: 574 IPPEHMN-GQVSILGDIYSYGILLLEMFTGKR 604
PE +N G +I D++S+GILL E+ T R
Sbjct: 183 TAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 214
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 108/212 (50%), Gaps = 28/212 (13%)
Query: 397 IGTGSFGSVYKGTLGDGTIVAIKVLKLQQQGALK--SFIDECNALKSTRHRNILRVITAC 454
+G G FG V+ G T VA+K LK QG++ +F+ E N +K +H+ ++R+
Sbjct: 30 LGAGQFGEVWMGYYNGHTKVAVKSLK---QGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 86
Query: 455 SSVDLEGNDFKALVFEFMSNGNLDQWLH-PSPAEHYQFKKLSVIQRLNIAIDVASALDYL 513
+ + ++ E+M NG+L +L PS KL++ + L++A +A + ++
Sbjct: 87 TQEPI------YIITEYMENGSLVDFLKTPSGI------KLTINKLLDMAAQIAEGMAFI 134
Query: 514 HHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGY 573
H DL+ +N+L+ ++ + DFGLA+ I DN T G K I +
Sbjct: 135 EERN---YIHRDLRAANILVSDTLSCKIADFGLARL---IEDN---EXTAREGAKFPIKW 185
Query: 574 IPPEHMN-GQVSILGDIYSYGILLLEMFTGKR 604
PE +N G +I D++S+GILL E+ T R
Sbjct: 186 TAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 217
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 108/212 (50%), Gaps = 28/212 (13%)
Query: 397 IGTGSFGSVYKGTLGDGTIVAIKVLKLQQQGALK--SFIDECNALKSTRHRNILRVITAC 454
+G G FG V+ G T VA+K LK QG++ +F+ E N +K +H+ ++R+
Sbjct: 29 LGAGQFGEVWMGYYNGHTKVAVKSLK---QGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 85
Query: 455 SSVDLEGNDFKALVFEFMSNGNLDQWLH-PSPAEHYQFKKLSVIQRLNIAIDVASALDYL 513
+ + ++ E+M NG+L +L PS KL++ + L++A +A + ++
Sbjct: 86 TQEPI------YIITEYMENGSLVDFLKTPSGI------KLTINKLLDMAAQIAEGMAFI 133
Query: 514 HHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGY 573
H DL+ +N+L+ ++ + DFGLA+ I DN T G K I +
Sbjct: 134 EERN---YIHRDLRAANILVSDTLSCKIADFGLARL---IEDN---EXTAREGAKFPIKW 184
Query: 574 IPPEHMN-GQVSILGDIYSYGILLLEMFTGKR 604
PE +N G +I D++S+GILL E+ T R
Sbjct: 185 TAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 216
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 108/212 (50%), Gaps = 28/212 (13%)
Query: 397 IGTGSFGSVYKGTLGDGTIVAIKVLKLQQQGALK--SFIDECNALKSTRHRNILRVITAC 454
+G G FG V+ G T VA+K LK QG++ +F+ E N +K +H+ ++R+
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLK---QGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 455 SSVDLEGNDFKALVFEFMSNGNLDQWLH-PSPAEHYQFKKLSVIQRLNIAIDVASALDYL 513
+ + ++ E+M NG+L +L PS KL++ + L++A +A + ++
Sbjct: 78 TQEPI------YIITEYMENGSLVDFLKTPSGI------KLTINKLLDMAAQIAEGMAFI 125
Query: 514 HHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGY 573
H DL+ +N+L+ ++ + DFGLA+ I DN T G K I +
Sbjct: 126 EERN---YIHRDLRAANILVSDTLSCKIADFGLARL---IEDN---EXTAREGAKFPIKW 176
Query: 574 IPPEHMN-GQVSILGDIYSYGILLLEMFTGKR 604
PE +N G +I D++S+GILL E+ T R
Sbjct: 177 TAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 208
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 108/212 (50%), Gaps = 28/212 (13%)
Query: 397 IGTGSFGSVYKGTLGDGTIVAIKVLKLQQQGALK--SFIDECNALKSTRHRNILRVITAC 454
+G G FG V+ G T VA+K LK QG++ +F+ E N +K +H+ ++R+
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLK---QGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 455 SSVDLEGNDFKALVFEFMSNGNLDQWLH-PSPAEHYQFKKLSVIQRLNIAIDVASALDYL 513
+ + ++ E+M NG+L +L PS KL++ + L++A +A + ++
Sbjct: 78 TQEPI------YIITEYMENGSLVDFLKTPSGI------KLTINKLLDMAAQIAEGMAFI 125
Query: 514 HHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGY 573
H DL+ +N+L+ ++ + DFGLA+ I DN T G K I +
Sbjct: 126 EERN---YIHRDLRAANILVSDTLSCKIADFGLARL---IEDN---EXTAREGAKFPIKW 176
Query: 574 IPPEHMN-GQVSILGDIYSYGILLLEMFTGKR 604
PE +N G +I D++S+GILL E+ T R
Sbjct: 177 TAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 208
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 108/212 (50%), Gaps = 28/212 (13%)
Query: 397 IGTGSFGSVYKGTLGDGTIVAIKVLKLQQQGALK--SFIDECNALKSTRHRNILRVITAC 454
+G G FG V+ G T VA+K LK QG++ +F+ E N +K +H+ ++R+
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLK---QGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 83
Query: 455 SSVDLEGNDFKALVFEFMSNGNLDQWLH-PSPAEHYQFKKLSVIQRLNIAIDVASALDYL 513
+ + ++ E+M NG+L +L PS KL++ + L++A +A + ++
Sbjct: 84 TQEPI------YIITEYMENGSLVDFLKTPSGI------KLTINKLLDMAAQIAEGMAFI 131
Query: 514 HHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGY 573
H DL+ +N+L+ ++ + DFGLA+ I DN T G K I +
Sbjct: 132 EERN---YIHRDLRAANILVSDTLSCKIADFGLARL---IEDN---EYTAREGAKFPIKW 182
Query: 574 IPPEHMN-GQVSILGDIYSYGILLLEMFTGKR 604
PE +N G +I D++S+GILL E+ T R
Sbjct: 183 TAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 214
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 108/212 (50%), Gaps = 28/212 (13%)
Query: 397 IGTGSFGSVYKGTLGDGTIVAIKVLKLQQQGALK--SFIDECNALKSTRHRNILRVITAC 454
+G G FG V+ G T VA+K LK QG++ +F+ E N +K +H+ ++R+
Sbjct: 22 LGAGQFGEVWMGYYNGHTKVAVKSLK---QGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 78
Query: 455 SSVDLEGNDFKALVFEFMSNGNLDQWLH-PSPAEHYQFKKLSVIQRLNIAIDVASALDYL 513
+ + ++ E+M NG+L +L PS KL++ + L++A +A + ++
Sbjct: 79 TQEPI------YIITEYMENGSLVDFLKTPSGI------KLTINKLLDMAAQIAEGMAFI 126
Query: 514 HHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGY 573
H DL+ +N+L+ ++ + DFGLA+ I DN T G K I +
Sbjct: 127 EERN---YIHRDLRAANILVSDTLSCKIADFGLARL---IEDN---EXTAREGAKFPIKW 177
Query: 574 IPPEHMN-GQVSILGDIYSYGILLLEMFTGKR 604
PE +N G +I D++S+GILL E+ T R
Sbjct: 178 TAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 209
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 108/212 (50%), Gaps = 28/212 (13%)
Query: 397 IGTGSFGSVYKGTLGDGTIVAIKVLKLQQQGALK--SFIDECNALKSTRHRNILRVITAC 454
+G G FG V+ G T VA+K LK QG++ +F+ E N +K +H+ ++R+
Sbjct: 23 LGAGQFGEVWMGYYNGHTKVAVKSLK---QGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 79
Query: 455 SSVDLEGNDFKALVFEFMSNGNLDQWLH-PSPAEHYQFKKLSVIQRLNIAIDVASALDYL 513
+ + ++ E+M NG+L +L PS KL++ + L++A +A + ++
Sbjct: 80 TQEPI------YIITEYMENGSLVDFLKTPSGI------KLTINKLLDMAAQIAEGMAFI 127
Query: 514 HHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGY 573
H DL+ +N+L+ ++ + DFGLA+ I DN T G K I +
Sbjct: 128 EERN---YIHRDLRAANILVSDTLSCKIADFGLARL---IEDN---EXTAREGAKFPIKW 178
Query: 574 IPPEHMN-GQVSILGDIYSYGILLLEMFTGKR 604
PE +N G +I D++S+GILL E+ T R
Sbjct: 179 TAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 210
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 108/212 (50%), Gaps = 28/212 (13%)
Query: 397 IGTGSFGSVYKGTLGDGTIVAIKVLKLQQQGALK--SFIDECNALKSTRHRNILRVITAC 454
+G G FG V+ G T VA+K LK QG++ +F+ E N +K +H+ ++R+
Sbjct: 31 LGAGQFGEVWMGYYNGHTKVAVKSLK---QGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 87
Query: 455 SSVDLEGNDFKALVFEFMSNGNLDQWLH-PSPAEHYQFKKLSVIQRLNIAIDVASALDYL 513
+ + ++ E+M NG+L +L PS KL++ + L++A +A + ++
Sbjct: 88 TQEPI------YIITEYMENGSLVDFLKTPSGI------KLTINKLLDMAAQIAEGMAFI 135
Query: 514 HHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGY 573
H DL+ +N+L+ ++ + DFGLA+ I DN T G K I +
Sbjct: 136 EERN---YIHRDLRAANILVSDTLSCKIADFGLARL---IEDN---EYTAREGAKFPIKW 186
Query: 574 IPPEHMN-GQVSILGDIYSYGILLLEMFTGKR 604
PE +N G +I D++S+GILL E+ T R
Sbjct: 187 TAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 218
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 108/212 (50%), Gaps = 28/212 (13%)
Query: 397 IGTGSFGSVYKGTLGDGTIVAIKVLKLQQQGALK--SFIDECNALKSTRHRNILRVITAC 454
+G G FG V+ G T VA+K LK QG++ +F+ E N +K +H+ ++R+
Sbjct: 26 LGAGQFGEVWMGYYNGHTKVAVKSLK---QGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 82
Query: 455 SSVDLEGNDFKALVFEFMSNGNLDQWLH-PSPAEHYQFKKLSVIQRLNIAIDVASALDYL 513
+ + ++ E+M NG+L +L PS KL++ + L++A +A + ++
Sbjct: 83 TQEPI------YIITEYMENGSLVDFLKTPSGI------KLTINKLLDMAAQIAEGMAFI 130
Query: 514 HHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGY 573
H DL+ +N+L+ ++ + DFGLA+ I DN T G K I +
Sbjct: 131 EERN---YIHRDLRAANILVSDTLSCKIADFGLARL---IEDN---EYTAREGAKFPIKW 181
Query: 574 IPPEHMN-GQVSILGDIYSYGILLLEMFTGKR 604
PE +N G +I D++S+GILL E+ T R
Sbjct: 182 TAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 213
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 113/229 (49%), Gaps = 31/229 (13%)
Query: 384 ISKSTDNFSKENL-----IGTGSFGSVYKGTLGDGTIVAIKVLKLQQQGAL--KSFIDEC 436
++K +E+L +G G FG V+ GT T VAIK LK G + ++F+ E
Sbjct: 5 LAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMSPEAFLQEA 61
Query: 437 NALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSV 496
+K RH ++++ S + +V E+M+ G+L +L ++ L +
Sbjct: 62 QVMKKLRHEKLVQLYAVVSEEPI------YIVTEYMNKGSLLDFLKGETGKY-----LRL 110
Query: 497 IQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDN 556
Q ++++ +AS + Y+ H DL+ +N+L+ +++ V DFGLA+ I DN
Sbjct: 111 PQLVDMSAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARL---IEDN 164
Query: 557 PSKNQTVSIGLKGSIGYIPPE-HMNGQVSILGDIYSYGILLLEMFTGKR 604
T G K I + PE + G+ +I D++S+GILL E+ T R
Sbjct: 165 ---EWTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 210
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 119/253 (47%), Gaps = 40/253 (15%)
Query: 380 SYSDISKSTDNFSKE---------NLIGTGSFGSVYKGTLG----DGTIVAIKVLKL-QQ 425
+Y D +++ F+KE ++G G FG V G L VAIK LK+
Sbjct: 27 TYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT 86
Query: 426 QGALKSFIDECNALKSTRHRNILR---VITACSSVDLEGNDFKALVFEFMSNGNLDQWLH 482
+ + F+ E + + H NI+R V+T V +V E+M NG+LD +L
Sbjct: 87 EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPV--------MIVTEYMENGSLDSFLR 138
Query: 483 PSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVG 542
A+ +VIQ + + +AS + YL D H DL N+L++ ++ V
Sbjct: 139 KHDAQ------FTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVS 189
Query: 543 DFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMN-GQVSILGDIYSYGILLLEMFT 601
DFGL++ L D+P T G K I + PE + + + D++SYGI+L E+ +
Sbjct: 190 DFGLSRVL---EDDPEAAYTTR-GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
Query: 602 -GKRPTGDMFKDD 613
G+RP +M D
Sbjct: 246 YGERPYWEMSNQD 258
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 119/253 (47%), Gaps = 40/253 (15%)
Query: 380 SYSDISKSTDNFSKE---------NLIGTGSFGSVYKGTLG----DGTIVAIKVLKL-QQ 425
+Y D +++ F+KE ++G G FG V G L VAIK LK+
Sbjct: 27 TYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT 86
Query: 426 QGALKSFIDECNALKSTRHRNILR---VITACSSVDLEGNDFKALVFEFMSNGNLDQWLH 482
+ + F+ E + + H NI+R V+T V +V E+M NG+LD +L
Sbjct: 87 EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPV--------MIVTEYMENGSLDSFLR 138
Query: 483 PSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVG 542
A+ +VIQ + + +AS + YL D H DL N+L++ ++ V
Sbjct: 139 KHDAQ------FTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVS 189
Query: 543 DFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMN-GQVSILGDIYSYGILLLEMFT 601
DFGL++ L D+P T G K I + PE + + + D++SYGI+L E+ +
Sbjct: 190 DFGLSRVL---EDDPEAAYTTR-GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
Query: 602 -GKRPTGDMFKDD 613
G+RP +M D
Sbjct: 246 YGERPYWEMSNQD 258
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/258 (30%), Positives = 122/258 (47%), Gaps = 36/258 (13%)
Query: 368 GTIPKEVRQSGMSYSDISKSTD--NFSKENLIGTGSFGSVYKGTLG----DGTIVAIKVL 421
G +P R S + + +K D N S + ++G G FG V G L VAIK L
Sbjct: 13 GLVP---RGSTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTL 69
Query: 422 KL-QQQGALKSFIDECNALKSTRHRNILR---VITACSSVDLEGNDFKALVFEFMSNGNL 477
K+ + + F+ E + + H NI+R V+T V +V E+M NG+L
Sbjct: 70 KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPV--------MIVTEYMENGSL 121
Query: 478 DQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDM 537
D +L A+ +VIQ + + +AS + YL D H DL N+L++ ++
Sbjct: 122 DSFLRKHDAQ------FTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILINSNL 172
Query: 538 TAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMN-GQVSILGDIYSYGILL 596
V DFGL++ L D+P T G K I + PE + + + D++SYGI+L
Sbjct: 173 VCKVSDFGLSRVL---EDDPEAAYTTR-GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVL 228
Query: 597 LEMFT-GKRPTGDMFKDD 613
E+ + G+RP +M D
Sbjct: 229 WEVMSYGERPYWEMSNQD 246
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 108/212 (50%), Gaps = 28/212 (13%)
Query: 397 IGTGSFGSVYKGTLGDGTIVAIKVLKLQQQGALK--SFIDECNALKSTRHRNILRVITAC 454
+G G FG V+ G T VA+K LK QG++ +F+ E N +K +H+ ++R+
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLK---QGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 455 SSVDLEGNDFKALVFEFMSNGNLDQWLH-PSPAEHYQFKKLSVIQRLNIAIDVASALDYL 513
+ + ++ E+M NG+L +L PS KL++ + L++A +A + ++
Sbjct: 78 TQEPI------YIITEYMENGSLVDFLKTPSGI------KLTINKLLDMAAQIAEGMAFI 125
Query: 514 HHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGY 573
H DL+ +N+L+ ++ + DFGLA+ I DN T G K I +
Sbjct: 126 EERN---YIHRDLRAANILVSDTLSCKIADFGLARL---IEDN---EYTAREGAKFPIKW 176
Query: 574 IPPEHMN-GQVSILGDIYSYGILLLEMFTGKR 604
PE +N G +I D++S+GILL E+ T R
Sbjct: 177 TAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 208
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 108/212 (50%), Gaps = 28/212 (13%)
Query: 397 IGTGSFGSVYKGTLGDGTIVAIKVLKLQQQGALK--SFIDECNALKSTRHRNILRVITAC 454
+G G FG V+ G T VA+K LK QG++ +F+ E N +K +H+ ++R+
Sbjct: 16 LGAGQFGEVWMGYYNGHTKVAVKSLK---QGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 72
Query: 455 SSVDLEGNDFKALVFEFMSNGNLDQWLH-PSPAEHYQFKKLSVIQRLNIAIDVASALDYL 513
+ + ++ E+M NG+L +L PS KL++ + L++A +A + ++
Sbjct: 73 TQEPI------YIITEYMENGSLVDFLKTPSGI------KLTINKLLDMAAQIAEGMAFI 120
Query: 514 HHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGY 573
H DL+ +N+L+ ++ + DFGLA+ I DN T G K I +
Sbjct: 121 EERN---YIHRDLRAANILVSDTLSCKIADFGLARL---IEDN---EYTAREGAKFPIKW 171
Query: 574 IPPEHMN-GQVSILGDIYSYGILLLEMFTGKR 604
PE +N G +I D++S+GILL E+ T R
Sbjct: 172 TAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 203
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 113/229 (49%), Gaps = 31/229 (13%)
Query: 384 ISKSTDNFSKENL-----IGTGSFGSVYKGTLGDGTIVAIKVLKLQQQGAL--KSFIDEC 436
++K +E+L +G G FG V+ GT T VAIK LK G + ++F+ E
Sbjct: 5 LAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMSPEAFLQEA 61
Query: 437 NALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSV 496
+K RH ++++ S + +V E+M+ G+L +L ++ L +
Sbjct: 62 QVMKKLRHEKLVQLYAVVSEEPI------YIVTEYMNKGSLLDFLKGETGKY-----LRL 110
Query: 497 IQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDN 556
Q ++++ +AS + Y+ H DL+ +N+L+ +++ V DFGLA+ I DN
Sbjct: 111 PQLVDMSAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARL---IEDN 164
Query: 557 PSKNQTVSIGLKGSIGYIPPE-HMNGQVSILGDIYSYGILLLEMFTGKR 604
T G K I + PE + G+ +I D++S+GILL E+ T R
Sbjct: 165 ---EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 210
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 119/253 (47%), Gaps = 40/253 (15%)
Query: 380 SYSDISKSTDNFSKE---------NLIGTGSFGSVYKGTLG----DGTIVAIKVLKL-QQ 425
+Y D +++ F+KE ++G G FG V G L VAIK LK+
Sbjct: 25 TYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT 84
Query: 426 QGALKSFIDECNALKSTRHRNILR---VITACSSVDLEGNDFKALVFEFMSNGNLDQWLH 482
+ + F+ E + + H NI+R V+T V +V E+M NG+LD +L
Sbjct: 85 EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPV--------MIVTEYMENGSLDSFLR 136
Query: 483 PSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVG 542
A+ +VIQ + + +AS + YL D H DL N+L++ ++ V
Sbjct: 137 KHDAQ------FTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVS 187
Query: 543 DFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMN-GQVSILGDIYSYGILLLEMFT 601
DFGL++ L D+P T G K I + PE + + + D++SYGI+L E+ +
Sbjct: 188 DFGLSRVL---EDDPEAAYTTR-GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 243
Query: 602 -GKRPTGDMFKDD 613
G+RP +M D
Sbjct: 244 YGERPYWEMSNQD 256
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 119/253 (47%), Gaps = 40/253 (15%)
Query: 380 SYSDISKSTDNFSKE---------NLIGTGSFGSVYKGTLG----DGTIVAIKVLKL-QQ 425
++ D +++ F+KE ++G G FG V G L VAIK LK+
Sbjct: 27 TFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT 86
Query: 426 QGALKSFIDECNALKSTRHRNILR---VITACSSVDLEGNDFKALVFEFMSNGNLDQWLH 482
+ + F+ E + + H NI+R V+T V +V E+M NG+LD +L
Sbjct: 87 EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPV--------MIVTEYMENGSLDSFLR 138
Query: 483 PSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVG 542
A+ +VIQ + + +AS + YL D H DL N+L++ ++ V
Sbjct: 139 KHDAQ------FTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVS 189
Query: 543 DFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMN-GQVSILGDIYSYGILLLEMFT 601
DFGLA+ L D+P T G K I + PE + + + D++SYGI+L E+ +
Sbjct: 190 DFGLARVL---EDDPEAAYTTR-GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
Query: 602 -GKRPTGDMFKDD 613
G+RP +M D
Sbjct: 246 YGERPYWEMSNQD 258
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 103/212 (48%), Gaps = 22/212 (10%)
Query: 394 ENLIGTGSFGSVYKGTLGDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRVITA 453
E +G G FG V+ GT T VAIK LK ++F+ E +K RH ++++
Sbjct: 190 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSP-EAFLQEAQVMKKLRHEKLVQLYAV 248
Query: 454 CSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYL 513
S + +V E+MS G+L +L K L + Q +++A +AS + Y+
Sbjct: 249 VSEEPI------YIVTEYMSKGSLLDFLKGEMG-----KYLRLPQLVDMAAQIASGMAYV 297
Query: 514 HHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGY 573
H DL+ +N+L+ +++ V DFGL + I DN T G K I +
Sbjct: 298 ER---MNYVHRDLRAANILVGENLVCKVADFGLGRL---IEDN---EYTARQGAKFPIKW 348
Query: 574 IPPE-HMNGQVSILGDIYSYGILLLEMFTGKR 604
PE + G+ +I D++S+GILL E+ T R
Sbjct: 349 TAPEAALYGRFTIKSDVWSFGILLTELTTKGR 380
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/241 (30%), Positives = 109/241 (45%), Gaps = 39/241 (16%)
Query: 382 SDISKSTDNFSKENLIGTGSFGSVYKGTLGDGTIVAIKVLKLQQQGALKSFIDECNALKS 441
S+ S DN LIG G +G+VYKG+L D VA+KV + ++FI+E N +
Sbjct: 6 SEPSLDLDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFANR---QNFINEKNIYRV 61
Query: 442 --TRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQW--LHPSPAEHYQFKKLSVI 497
H NI R I V +G LV E+ NG+L ++ LH S +
Sbjct: 62 PLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTS----------DWV 111
Query: 498 QRLNIAIDVASALDYLH------HHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLF 551
+A V L YLH H I+H DL NVL+ D T + DFGL+
Sbjct: 112 SSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLS---M 168
Query: 552 EISDN----PSKNQTVSIGLKGSIGYIPPEHMNGQVSILG--------DIYSYGILLLEM 599
++ N P + +I G+I Y+ PE + G V++ D+Y+ G++ E+
Sbjct: 169 RLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEI 228
Query: 600 F 600
F
Sbjct: 229 F 229
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 119/253 (47%), Gaps = 40/253 (15%)
Query: 380 SYSDISKSTDNFSKE---------NLIGTGSFGSVYKGTLG----DGTIVAIKVLKL-QQ 425
++ D +++ F+KE ++G G FG V G L VAIK LK+
Sbjct: 27 TFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT 86
Query: 426 QGALKSFIDECNALKSTRHRNILR---VITACSSVDLEGNDFKALVFEFMSNGNLDQWLH 482
+ + F+ E + + H NI+R V+T V +V E+M NG+LD +L
Sbjct: 87 EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPV--------MIVTEYMENGSLDSFLR 138
Query: 483 PSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVG 542
A+ +VIQ + + +AS + YL D H DL N+L++ ++ V
Sbjct: 139 KHDAQ------FTVIQLVGMLRGIASGMKYL---SDMGFVHRDLAARNILINSNLVCKVS 189
Query: 543 DFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMN-GQVSILGDIYSYGILLLEMFT 601
DFGL++ L D+P T G K I + PE + + + D++SYGI+L E+ +
Sbjct: 190 DFGLSRVL---EDDPEAAYTTR-GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
Query: 602 -GKRPTGDMFKDD 613
G+RP +M D
Sbjct: 246 YGERPYWEMSNQD 258
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 119/253 (47%), Gaps = 40/253 (15%)
Query: 380 SYSDISKSTDNFSKE---------NLIGTGSFGSVYKGTLG----DGTIVAIKVLKL-QQ 425
++ D +++ F+KE ++G G FG V G L VAIK LK+
Sbjct: 27 TFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT 86
Query: 426 QGALKSFIDECNALKSTRHRNILR---VITACSSVDLEGNDFKALVFEFMSNGNLDQWLH 482
+ + F+ E + + H NI+R V+T V +V E+M NG+LD +L
Sbjct: 87 EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPV--------MIVTEYMENGSLDSFLR 138
Query: 483 PSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVG 542
A+ +VIQ + + +AS + YL D H DL N+L++ ++ V
Sbjct: 139 KHDAQ------FTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVS 189
Query: 543 DFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMN-GQVSILGDIYSYGILLLEMFT 601
DFGL++ L D+P T G K I + PE + + + D++SYGI+L E+ +
Sbjct: 190 DFGLSRVL---EDDPEAAYTTR-GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
Query: 602 -GKRPTGDMFKDD 613
G+RP +M D
Sbjct: 246 YGERPYWEMSNQD 258
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/234 (30%), Positives = 112/234 (47%), Gaps = 31/234 (13%)
Query: 390 NFSKENLIGTGSFGSVYKGTLG----DGTIVAIKVLKL-QQQGALKSFIDECNALKSTRH 444
N S + ++G G FG V G L VAIK LK+ + + F+ E + + H
Sbjct: 17 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 76
Query: 445 RNILR---VITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLN 501
NI+R V+T V +V E+M NG+LD +L A+ +VIQ +
Sbjct: 77 PNIIRLEGVVTKSKPV--------MIVTEYMENGSLDSFLRKHDAQ------FTVIQLVG 122
Query: 502 IAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQ 561
+ +AS + YL D H DL N+L++ ++ V DFGL++ L D+P
Sbjct: 123 MLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVL---EDDPEAAY 176
Query: 562 TVSIGLKGSIGYIPPEHMN-GQVSILGDIYSYGILLLEMFT-GKRPTGDMFKDD 613
T G K I + PE + + + D++SYGI+L E+ + G+RP +M D
Sbjct: 177 TTR-GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD 229
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 119/253 (47%), Gaps = 40/253 (15%)
Query: 380 SYSDISKSTDNFSKE---------NLIGTGSFGSVYKGTLG----DGTIVAIKVLKL-QQ 425
++ D +++ F+KE ++G G FG V G L VAIK LK+
Sbjct: 27 TFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT 86
Query: 426 QGALKSFIDECNALKSTRHRNILR---VITACSSVDLEGNDFKALVFEFMSNGNLDQWLH 482
+ + F+ E + + H NI+R V+T V +V E+M NG+LD +L
Sbjct: 87 EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPV--------MIVTEYMENGSLDSFLR 138
Query: 483 PSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVG 542
A+ +VIQ + + +AS + YL D H DL N+L++ ++ V
Sbjct: 139 KHDAQ------FTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVS 189
Query: 543 DFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMN-GQVSILGDIYSYGILLLEMFT 601
DFGL++ L D+P T G K I + PE + + + D++SYGI+L E+ +
Sbjct: 190 DFGLSRVL---EDDPEAAYTTR-GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
Query: 602 -GKRPTGDMFKDD 613
G+RP +M D
Sbjct: 246 YGERPYWEMSNQD 258
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 115/230 (50%), Gaps = 29/230 (12%)
Query: 394 ENLIGTGSFGSVYKGTL---GDGTI-VAIKVLKL-QQQGALKSFIDECNALKSTRHRNIL 448
E +IG G FG V G L G I VAIK LK + + F+ E + + H N++
Sbjct: 12 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVI 71
Query: 449 R---VITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAID 505
V+T + V ++ EFM NG+LD +L + + +VIQ + +
Sbjct: 72 HLEGVVTKSTPV--------MIITEFMENGSLDSFLRQNDGQ------FTVIQLVGMLRG 117
Query: 506 VASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSI 565
+A+ + YL D H L N+L++ ++ V DFGL++FL + + +P+ T ++
Sbjct: 118 IAAGMKYL---ADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPT--YTSAL 172
Query: 566 GLKGSIGYIPPEHMN-GQVSILGDIYSYGILLLEMFT-GKRPTGDMFKDD 613
G K I + PE + + + D++SYGI++ E+ + G+RP DM D
Sbjct: 173 GGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQD 222
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 108/212 (50%), Gaps = 28/212 (13%)
Query: 397 IGTGSFGSVYKGTLGDGTIVAIKVLKLQQQGALK--SFIDECNALKSTRHRNILRVITAC 454
+G G FG V+ G T VA+K LK QG++ +F+ E N +K +H+ ++R+
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVKSLK---QGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 73
Query: 455 SSVDLEGNDFKALVFEFMSNGNLDQWLH-PSPAEHYQFKKLSVIQRLNIAIDVASALDYL 513
+ + ++ E+M NG+L +L PS KL++ + L++A +A + ++
Sbjct: 74 TQEPI------YIITEYMENGSLVDFLKTPSGI------KLTINKLLDMAAQIAEGMAFI 121
Query: 514 HHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGY 573
H +L+ +N+L+ ++ + DFGLA+ I DN T G K I +
Sbjct: 122 EERN---YIHRNLRAANILVSDTLSCKIADFGLARL---IEDN---EYTAREGAKFPIKW 172
Query: 574 IPPEHMN-GQVSILGDIYSYGILLLEMFTGKR 604
PE +N G +I D++S+GILL E+ T R
Sbjct: 173 TAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 204
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 118/253 (46%), Gaps = 40/253 (15%)
Query: 380 SYSDISKSTDNFSKE---------NLIGTGSFGSVYKGTLG----DGTIVAIKVLKL-QQ 425
+Y D +++ F+KE ++G G FG V G L VAIK LK+
Sbjct: 27 TYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT 86
Query: 426 QGALKSFIDECNALKSTRHRNILR---VITACSSVDLEGNDFKALVFEFMSNGNLDQWLH 482
+ + F+ E + + H NI+R V+T V +V E M NG+LD +L
Sbjct: 87 EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPV--------MIVTEXMENGSLDSFLR 138
Query: 483 PSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVG 542
A+ +VIQ + + +AS + YL D H DL N+L++ ++ V
Sbjct: 139 KHDAQ------FTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVS 189
Query: 543 DFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMN-GQVSILGDIYSYGILLLEMFT 601
DFGL++ L D+P T G K I + PE + + + D++SYGI+L E+ +
Sbjct: 190 DFGLSRVL---EDDPEAAYTTR-GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
Query: 602 -GKRPTGDMFKDD 613
G+RP +M D
Sbjct: 246 YGERPYWEMSNQD 258
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 114/230 (49%), Gaps = 34/230 (14%)
Query: 392 SKENLIGTGSFGSVYKGTLGDGT-----IVAIKVLKL-QQQGALKSFIDECNALKSTRHR 445
+++ +IG G FG VYKG L + VAIK LK + F+ E + H
Sbjct: 47 TRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHH 106
Query: 446 NILRVITACSSVDLEG--NDFKALVF--EFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLN 501
NI+R LEG + +K ++ E+M NG LD++L E SV+Q +
Sbjct: 107 NIIR---------LEGVISKYKPMMIITEYMENGALDKFLREKDGE------FSVLQLVG 151
Query: 502 IAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQ 561
+ +A+ + YL + H DL N+L++ ++ V DFGL++ L D+P
Sbjct: 152 MLRGIAAGMKYL---ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVL---EDDPEATY 205
Query: 562 TVSIGLKGSIGYIPPEHMN-GQVSILGDIYSYGILLLEMFT-GKRPTGDM 609
T S G K I + PE ++ + + D++S+GI++ E+ T G+RP ++
Sbjct: 206 TTS-GGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWEL 254
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 118/253 (46%), Gaps = 40/253 (15%)
Query: 380 SYSDISKSTDNFSKE---------NLIGTGSFGSVYKGTLG----DGTIVAIKVLKL-QQ 425
++ D +++ F+KE ++G G FG V G L VAIK LK+
Sbjct: 27 TFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT 86
Query: 426 QGALKSFIDECNALKSTRHRNILR---VITACSSVDLEGNDFKALVFEFMSNGNLDQWLH 482
+ + F+ E + + H NI+R V+T V +V E+M NG+LD +L
Sbjct: 87 EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPV--------MIVTEYMENGSLDSFLR 138
Query: 483 PSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVG 542
A+ +VIQ + + +AS + YL D H DL N+L++ ++ V
Sbjct: 139 KHDAQ------FTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVS 189
Query: 543 DFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMN-GQVSILGDIYSYGILLLEMFT 601
DFGL + L D+P T G K I + PE + + + D++SYGI+L E+ +
Sbjct: 190 DFGLGRVL---EDDPEAAYTTR-GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
Query: 602 -GKRPTGDMFKDD 613
G+RP +M D
Sbjct: 246 YGERPYWEMSNQD 258
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 118/253 (46%), Gaps = 40/253 (15%)
Query: 380 SYSDISKSTDNFSKE---------NLIGTGSFGSVYKGTL---GDGTI-VAIKVLKL-QQ 425
++ D +++ F+KE +IG G FG V G L G I VAIK LK
Sbjct: 11 TFEDPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYT 70
Query: 426 QGALKSFIDECNALKSTRHRNILR---VITACSSVDLEGNDFKALVFEFMSNGNLDQWLH 482
+ F+ E + + H NI+ V+T C V ++ E+M NG+LD +L
Sbjct: 71 DKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPV--------MIITEYMENGSLDAFLR 122
Query: 483 PSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVG 542
+ + +VIQ + + + S + YL D H DL N+L++ ++ V
Sbjct: 123 KNDG------RFTVIQLVGMLRGIGSGMKYLS---DMSAVHRDLAARNILVNSNLVCKVS 173
Query: 543 DFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMN-GQVSILGDIYSYGILLLEMFT 601
DFG+++ L D+P T G K I + PE + + + D++SYGI++ E+ +
Sbjct: 174 DFGMSRVL---EDDPEAAYTTR-GGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 229
Query: 602 -GKRPTGDMFKDD 613
G+RP DM D
Sbjct: 230 YGERPYWDMSNQD 242
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 117/253 (46%), Gaps = 40/253 (15%)
Query: 380 SYSDISKSTDNFSKE---------NLIGTGSFGSVYKGTLG----DGTIVAIKVLKL-QQ 425
+Y D +++ F+KE +IG G FG V G L VAIK LK+
Sbjct: 25 TYEDPNRAVHQFAKELDASCIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYT 84
Query: 426 QGALKSFIDECNALKSTRHRNILR---VITACSSVDLEGNDFKALVFEFMSNGNLDQWLH 482
+ + F+ E + + H N++ V+T V +V EFM NG LD +L
Sbjct: 85 EKQRRDFLCEASIMGQFDHPNVVHLEGVVTRGKPV--------MIVIEFMENGALDAFLR 136
Query: 483 PSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVG 542
+ +VIQ + + +A+ + YL D H DL N+L++ ++ V
Sbjct: 137 KHDGQ------FTVIQLVGMLRGIAAGMRYL---ADMGYVHRDLAARNILVNSNLVCKVS 187
Query: 543 DFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMN-GQVSILGDIYSYGILLLEMFT 601
DFGL++ I D+P T + G K + + PE + + + D++SYGI++ E+ +
Sbjct: 188 DFGLSRV---IEDDPEAVYTTT-GGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS 243
Query: 602 -GKRPTGDMFKDD 613
G+RP DM D
Sbjct: 244 YGERPYWDMSNQD 256
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 109/230 (47%), Gaps = 31/230 (13%)
Query: 394 ENLIGTGSFGSVYKGTL---GDGTI-VAIKVLKL-QQQGALKSFIDECNALKSTRHRNIL 448
E +IG G FG V G L G I VAIK LK + F+ E + + H NI+
Sbjct: 19 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 78
Query: 449 R---VITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAID 505
V+T C V ++ E+M NG+LD +L + + +VIQ + +
Sbjct: 79 HLEGVVTKCKPV--------MIITEYMENGSLDAFLRKNDG------RFTVIQLVGMLRG 124
Query: 506 VASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSI 565
+ S + YL D H DL N+L++ ++ V DFG+++ L D+P T
Sbjct: 125 IGSGMKYLS---DMSYVHRDLAARNILVNSNLVCKVSDFGMSRVL---EDDPEAAYTTR- 177
Query: 566 GLKGSIGYIPPEHMN-GQVSILGDIYSYGILLLEMFT-GKRPTGDMFKDD 613
G K I + PE + + + D++SYGI++ E+ + G+RP DM D
Sbjct: 178 GGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQD 227
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 109/230 (47%), Gaps = 31/230 (13%)
Query: 394 ENLIGTGSFGSVYKGTL---GDGTI-VAIKVLKL-QQQGALKSFIDECNALKSTRHRNIL 448
E +IG G FG V G L G I VAIK LK + F+ E + + H NI+
Sbjct: 13 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 72
Query: 449 R---VITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAID 505
V+T C V ++ E+M NG+LD +L + + +VIQ + +
Sbjct: 73 HLEGVVTKCKPV--------MIITEYMENGSLDAFLRKNDG------RFTVIQLVGMLRG 118
Query: 506 VASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSI 565
+ S + YL D H DL N+L++ ++ V DFG+++ L D+P T
Sbjct: 119 IGSGMKYLS---DMSYVHRDLAARNILVNSNLVCKVSDFGMSRVL---EDDPEAAYTTR- 171
Query: 566 GLKGSIGYIPPEHMN-GQVSILGDIYSYGILLLEMFT-GKRPTGDMFKDD 613
G K I + PE + + + D++SYGI++ E+ + G+RP DM D
Sbjct: 172 GGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQD 221
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/234 (30%), Positives = 111/234 (47%), Gaps = 31/234 (13%)
Query: 390 NFSKENLIGTGSFGSVYKGTLG----DGTIVAIKVLKL-QQQGALKSFIDECNALKSTRH 444
N S + ++G G FG V G L VAIK LK+ + + F+ E + + H
Sbjct: 17 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 76
Query: 445 RNILR---VITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLN 501
NI+R V+T V +V E M NG+LD +L A+ +VIQ +
Sbjct: 77 PNIIRLEGVVTKSKPV--------MIVTEXMENGSLDSFLRKHDAQ------FTVIQLVG 122
Query: 502 IAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQ 561
+ +AS + YL D H DL N+L++ ++ V DFGL++ L D+P
Sbjct: 123 MLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVL---EDDPEAAY 176
Query: 562 TVSIGLKGSIGYIPPEHMN-GQVSILGDIYSYGILLLEMFT-GKRPTGDMFKDD 613
T G K I + PE + + + D++SYGI+L E+ + G+RP +M D
Sbjct: 177 TTR-GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD 229
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 118/253 (46%), Gaps = 40/253 (15%)
Query: 380 SYSDISKSTDNFSKE---------NLIGTGSFGSVYKGTLG----DGTIVAIKVLKL-QQ 425
++ D +++ F+KE ++G G FG V G L VAIK LK+
Sbjct: 27 TFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT 86
Query: 426 QGALKSFIDECNALKSTRHRNILR---VITACSSVDLEGNDFKALVFEFMSNGNLDQWLH 482
+ + F+ E + + H NI+R V+T V +V E M NG+LD +L
Sbjct: 87 EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPV--------MIVTEXMENGSLDSFLR 138
Query: 483 PSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVG 542
A+ +VIQ + + +AS + YL D H DL N+L++ ++ V
Sbjct: 139 KHDAQ------FTVIQLVGMLRGIASGMKYL---SDMGAVHRDLAARNILINSNLVCKVS 189
Query: 543 DFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMN-GQVSILGDIYSYGILLLEMFT 601
DFGL++ L D+P T G K I + PE + + + D++SYGI+L E+ +
Sbjct: 190 DFGLSRVL---EDDPEAAYTTR-GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
Query: 602 -GKRPTGDMFKDD 613
G+RP +M D
Sbjct: 246 YGERPYWEMSNQD 258
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 102/212 (48%), Gaps = 22/212 (10%)
Query: 394 ENLIGTGSFGSVYKGTLGDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRVITA 453
E +G G FG V+ T T VA+K +K ++++F+ E N +K+ +H ++++
Sbjct: 20 EKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSM-SVEAFLAEANVMKTLQHDKLVKLHAV 78
Query: 454 CSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYL 513
+ + ++ EFM+ G+L +L KL ++ + +A + ++
Sbjct: 79 VTKEPI------YIITEFMAKGSLLDFLKSDEGSKQPLPKL-----IDFSAQIAEGMAFI 127
Query: 514 HHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGY 573
H DL+ +N+L+ + + DFGLA+ I DN T G K I +
Sbjct: 128 EQRN---YIHRDLRAANILVSASLVCKIADFGLARV---IEDN---EYTAREGAKFPIKW 178
Query: 574 IPPEHMN-GQVSILGDIYSYGILLLEMFTGKR 604
PE +N G +I D++S+GILL+E+ T R
Sbjct: 179 TAPEAINFGSFTIKSDVWSFGILLMEIVTYGR 210
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 105/211 (49%), Gaps = 22/211 (10%)
Query: 397 IGTGSFGSVYKGTLGDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRVITACSS 456
+G G FG V+ G + T VA+K LK ++++F++E N +K+ +H ++R+ +
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTM-SVQAFLEEANLMKTLQHDKLVRLYAVVTR 79
Query: 457 VDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHH 516
+ ++ E+M+ G+L +L KL ++ + +A + Y+
Sbjct: 80 -----EEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKL-----IDFSAQIAEGMAYIERK 129
Query: 517 CDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPP 576
H DL+ +NVL+ + + + DFGLA+ I DN T G K I + P
Sbjct: 130 N---YIHRDLRAANVLVSESLMCKIADFGLARV---IEDN---EYTAREGAKFPIKWTAP 180
Query: 577 EHMN-GQVSILGDIYSYGILLLEMFT-GKRP 605
E +N G +I D++S+GILL E+ T GK P
Sbjct: 181 EAINFGCFTIKSDVWSFGILLYEIVTYGKIP 211
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 102/212 (48%), Gaps = 22/212 (10%)
Query: 394 ENLIGTGSFGSVYKGTLGDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRVITA 453
E +G G FG V+ T T VA+K +K ++++F+ E N +K+ +H ++++
Sbjct: 193 EKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSM-SVEAFLAEANVMKTLQHDKLVKLHAV 251
Query: 454 CSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYL 513
+ + ++ EFM+ G+L +L KL ++ + +A + ++
Sbjct: 252 VTKEPI------YIITEFMAKGSLLDFLKSDEGSKQPLPKL-----IDFSAQIAEGMAFI 300
Query: 514 HHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGY 573
H DL+ +N+L+ + + DFGLA+ I DN T G K I +
Sbjct: 301 EQRN---YIHRDLRAANILVSASLVCKIADFGLARV---IEDN---EYTAREGAKFPIKW 351
Query: 574 IPPEHMN-GQVSILGDIYSYGILLLEMFTGKR 604
PE +N G +I D++S+GILL+E+ T R
Sbjct: 352 TAPEAINFGSFTIKSDVWSFGILLMEIVTYGR 383
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 105/211 (49%), Gaps = 22/211 (10%)
Query: 397 IGTGSFGSVYKGTLGDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRVITACSS 456
+G G FG V+ G + T VA+K LK ++++F++E N +K+ +H ++R+ +
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTM-SVQAFLEEANLMKTLQHDKLVRLYAVVTK 78
Query: 457 VDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHH 516
+ ++ EFM+ G+L +L KL ++ + +A + Y+
Sbjct: 79 -----EEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKL-----IDFSAQIAEGMAYIERK 128
Query: 517 CDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPP 576
H DL+ +NVL+ + + + DFGLA+ I DN T G K I + P
Sbjct: 129 N---YIHRDLRAANVLVSESLMCKIADFGLARV---IEDN---EYTAREGAKFPIKWTAP 179
Query: 577 EHMN-GQVSILGDIYSYGILLLEMFT-GKRP 605
E +N G +I +++S+GILL E+ T GK P
Sbjct: 180 EAINFGCFTIKSNVWSFGILLYEIVTYGKIP 210
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 102/209 (48%), Gaps = 22/209 (10%)
Query: 397 IGTGSFGSVYKGTLGDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRVITACSS 456
+G G FG V+ GT T VAIK LK +SF++E +K +H ++++ S
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSP-ESFLEEAQIMKKLKHDKLVQLYAVVSE 75
Query: 457 VDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHH 516
+ +V E+M+ G+L +L + + L + +++A VA+ + Y+
Sbjct: 76 EPI------YIVTEYMNKGSLLDFLKDG-----EGRALKLPNLVDMAAQVAAGMAYIER- 123
Query: 517 CDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPP 576
H DL+ +N+L+ + + DFGLA+ I DN T G K I + P
Sbjct: 124 --MNYIHRDLRSANILVGNGLICKIADFGLARL---IEDN---EXTARQGAKFPIKWTAP 175
Query: 577 E-HMNGQVSILGDIYSYGILLLEMFTGKR 604
E + G+ +I D++S+GILL E+ T R
Sbjct: 176 EAALYGRFTIKSDVWSFGILLTELVTKGR 204
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 106/212 (50%), Gaps = 28/212 (13%)
Query: 397 IGTGSFGSVYKGTLGDGTIVAIKVLKLQQQGALK--SFIDECNALKSTRHRNILRVITAC 454
+G G G V+ G T VA+K LK QG++ +F+ E N +K +H+ ++R+
Sbjct: 21 LGAGQAGEVWMGYYNGHTKVAVKSLK---QGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 455 SSVDLEGNDFKALVFEFMSNGNLDQWLH-PSPAEHYQFKKLSVIQRLNIAIDVASALDYL 513
+ + ++ E+M NG+L +L PS KL++ + L++A +A + ++
Sbjct: 78 TQEPI------YIITEYMENGSLVDFLKTPSGI------KLTINKLLDMAAQIAEGMAFI 125
Query: 514 HHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGY 573
H DL+ +N+L+ ++ + DFGLA+ I D T G K I +
Sbjct: 126 EERN---YIHRDLRAANILVSDTLSCKIADFGLARL---IED---AEXTAREGAKFPIKW 176
Query: 574 IPPEHMN-GQVSILGDIYSYGILLLEMFTGKR 604
PE +N G +I D++S+GILL E+ T R
Sbjct: 177 TAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 208
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 120/253 (47%), Gaps = 40/253 (15%)
Query: 380 SYSDISKSTDNFSKE---------NLIGTGSFGSVYKGTL---GDGTI-VAIKVLKL-QQ 425
+Y D +++ F+KE +IG G FG V G L G + VAIK LK+
Sbjct: 4 TYEDPNQAVHEFAKEIEASCITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYT 63
Query: 426 QGALKSFIDECNALKSTRHRNILR---VITACSSVDLEGNDFKALVFEFMSNGNLDQWLH 482
+ + F+ E + + H NI+ V+T V +V E+M NG+LD +L
Sbjct: 64 EKQRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPV--------MIVTEYMENGSLDTFLK 115
Query: 483 PSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVG 542
+ + +VIQ + + +++ + YL D H DL N+L++ ++ V
Sbjct: 116 KNDGQ------FTVIQLVGMLRGISAGMKYL---SDMGYVHRDLAARNILINSNLVCKVS 166
Query: 543 DFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMN-GQVSILGDIYSYGILLLEMFT 601
DFGL++ L D+P T G K I + PE + + + D++SYGI++ E+ +
Sbjct: 167 DFGLSRVL---EDDPEAAYTTR-GGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVS 222
Query: 602 -GKRPTGDMFKDD 613
G+RP +M D
Sbjct: 223 YGERPYWEMTNQD 235
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 114/247 (46%), Gaps = 32/247 (12%)
Query: 376 QSGMSYSDISKSTDNFSKENLIGTGSFGSVYKGTL------GDGTIVAIKVLKLQQQGAL 429
SG+ I + +E +G G+FG V+ D +VA+K LK A
Sbjct: 4 HSGIHVQHIKRRDIVLKRE--LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAAR 61
Query: 430 KSFIDECNALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPS----- 484
K F E L + +H +I++ C D +VFE+M +G+L+++L
Sbjct: 62 KDFQREAELLTNLQHEHIVKFYGVCGD-----GDPLIMVFEYMKHGDLNKFLRAHGPDAM 116
Query: 485 ---PAEHYQFK-KLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAH 540
+ Q K +L + Q L+IA +AS + YL H DL N L+ ++
Sbjct: 117 ILVDGQPRQAKGELGLSQMLHIASQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVK 173
Query: 541 VGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEH-MNGQVSILGDIYSYGILLLEM 599
+GDFG+++ ++ T+ I ++PPE M + + D++S+G++L E+
Sbjct: 174 IGDFGMSRDVYSTDYYRVGGHTML-----PIRWMPPESIMYRKFTTESDVWSFGVILWEI 228
Query: 600 FT-GKRP 605
FT GK+P
Sbjct: 229 FTYGKQP 235
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 112/243 (46%), Gaps = 33/243 (13%)
Query: 371 PKEVRQSGMSYSDISKSTDNFSKENLIGTGSFGSVYKGT-LGDGTIVAIK---VLKLQQQ 426
P++ + M Y+ ++ NF E IG G F VY+ L DG VA+K + L
Sbjct: 18 PQKALRPDMGYNTLA----NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDA 73
Query: 427 GALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPA 486
A I E + LK H N+++ + +E N+ +V E G+L + +
Sbjct: 74 KARADCIKEIDLLKQLNHPNVIKYYASF----IEDNELN-IVLELADAGDLSRMI----- 123
Query: 487 EHYQFKKLSVIQR--LNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDF 544
+H++ +K + +R + + SAL+++H + H D+KP+NV + +GD
Sbjct: 124 KHFKKQKRLIPERTVWKYFVQLCSALEHMH---SRRVMHRDIKPANVFITATGVVKLGDL 180
Query: 545 GLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPE--HMNGQVSILGDIYSYGILLLEMFTG 602
GL +F S T + L G+ Y+ PE H NG + DI+S G LL EM
Sbjct: 181 GLGRFF-------SSKTTAAHSLVGTPYYMSPERIHENG-YNFKSDIWSLGCLLYEMAAL 232
Query: 603 KRP 605
+ P
Sbjct: 233 QSP 235
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 74/242 (30%), Positives = 112/242 (46%), Gaps = 41/242 (16%)
Query: 397 IGTGSFGSVYKGTLGDGTIVAIKVL-------KLQQQGALKSFIDECNALKSTRHRNILR 449
+G G +VY L + TI+ IKV +++ LK F E + H+NI+
Sbjct: 19 LGGGGMSTVY---LAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVS 75
Query: 450 VITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASA 509
+I VD E +D LV E++ L +++ LSV +N +
Sbjct: 76 MI----DVD-EEDDCYYLVMEYIEGPTLSEYIE-------SHGPLSVDTAINFTNQI--- 120
Query: 510 LDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKG 569
LD + H D I H D+KP N+L+D + T + DFG+AK L E S T + + G
Sbjct: 121 LDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETS------LTQTNHVLG 174
Query: 570 SIGYIPPEHMNGQVS-ILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVSMALPDHV 628
++ Y PE G+ + DIYS GI+L EM G+ P F+ VS+A+ H+
Sbjct: 175 TVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPP--------FNGETAVSIAIK-HI 225
Query: 629 MD 630
D
Sbjct: 226 QD 227
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 96/213 (45%), Gaps = 26/213 (12%)
Query: 397 IGTGSFGSV---YKGTLGD--GTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRVI 451
+G G+FGSV L D G +VA+K L+ + L+ F E LKS +H NI++
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 452 TACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALD 511
C S G L+ EF+ G+L ++L +++ I+ L + ++
Sbjct: 81 GVCYSA---GRRNLKLIMEFLPYGSLREYLQKHK------ERIDHIKLLQYTSQICKGME 131
Query: 512 YLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGS- 570
YL H DL N+L++ + +GDFGL K L P + + G
Sbjct: 132 YL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL------PQDKEXXKVKEPGES 182
Query: 571 --IGYIPPEHMNGQVSILGDIYSYGILLLEMFT 601
Y P + S+ D++S+G++L E+FT
Sbjct: 183 PIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 109/223 (48%), Gaps = 27/223 (12%)
Query: 397 IGTGSFGSVYKGTL------GDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRV 450
+G G+FG V+ D +VA+K LK A K F E L + +H +I++
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKF 80
Query: 451 ITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSP------AEHYQFKKLSVIQRLNIAI 504
C +EG+ +VFE+M +G+L+++L AE +L+ Q L+IA
Sbjct: 81 YGVC----VEGDPL-IMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQ 135
Query: 505 DVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVS 564
+A+ + YL H DL N L+ +++ +GDFG+++ ++ T+
Sbjct: 136 QIAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTML 192
Query: 565 IGLKGSIGYIPPEH-MNGQVSILGDIYSYGILLLEMFT-GKRP 605
I ++PPE M + + D++S G++L E+FT GK+P
Sbjct: 193 -----PIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQP 230
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 107/228 (46%), Gaps = 29/228 (12%)
Query: 382 SDISKSTDNFSKENLIGTGSFGSVYKGTLGDGTIVAIKVLKLQQQGAL--KSFIDECNAL 439
S I S F +E IG+G FG V+ G + VAIK ++ +GA+ + FI+E +
Sbjct: 2 SVIDPSELTFVQE--IGSGQFGLVHLGYWLNKDKVAIKTIR---EGAMSEEDFIEEAEVM 56
Query: 440 KSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQR 499
H ++++ C LE LVFEFM +G L +L Q +
Sbjct: 57 MKLSHPKLVQLYGVC----LEQAPI-CLVFEFMEHGCLSDYLRT------QRGLFAAETL 105
Query: 500 LNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSK 559
L + +DV + YL C + H DL N L+ ++ V DFG+ +F+ +
Sbjct: 106 LGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLD------D 156
Query: 560 NQTVSIGLKGSIGYIPPEHMN-GQVSILGDIYSYGILLLEMFT-GKRP 605
T S G K + + PE + + S D++S+G+L+ E+F+ GK P
Sbjct: 157 QYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIP 204
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 106/226 (46%), Gaps = 29/226 (12%)
Query: 384 ISKSTDNFSKENLIGTGSFGSVYKGTLGDGTIVAIKVLKLQQQGAL--KSFIDECNALKS 441
I S F +E IG+G FG V+ G + VAIK ++ +GA+ + FI+E +
Sbjct: 2 IDPSELTFVQE--IGSGQFGLVHLGYWLNKDKVAIKTIR---EGAMSEEDFIEEAEVMMK 56
Query: 442 TRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLN 501
H ++++ C LE LVFEFM +G L +L Q + L
Sbjct: 57 LSHPKLVQLYGVC----LEQAPI-CLVFEFMEHGCLSDYLRT------QRGLFAAETLLG 105
Query: 502 IAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQ 561
+ +DV + YL C + H DL N L+ ++ V DFG+ +F+ +
Sbjct: 106 MCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLD------DQY 156
Query: 562 TVSIGLKGSIGYIPPEHMN-GQVSILGDIYSYGILLLEMFT-GKRP 605
T S G K + + PE + + S D++S+G+L+ E+F+ GK P
Sbjct: 157 TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIP 202
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 106/226 (46%), Gaps = 29/226 (12%)
Query: 384 ISKSTDNFSKENLIGTGSFGSVYKGTLGDGTIVAIKVLKLQQQGAL--KSFIDECNALKS 441
I S F +E IG+G FG V+ G + VAIK ++ +GA+ + FI+E +
Sbjct: 7 IDPSELTFVQE--IGSGQFGLVHLGYWLNKDKVAIKTIR---EGAMSEEDFIEEAEVMMK 61
Query: 442 TRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLN 501
H ++++ C LE LVFEFM +G L +L Q + L
Sbjct: 62 LSHPKLVQLYGVC----LEQAPI-CLVFEFMEHGCLSDYLRT------QRGLFAAETLLG 110
Query: 502 IAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQ 561
+ +DV + YL C + H DL N L+ ++ V DFG+ +F+ +
Sbjct: 111 MCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLD------DQY 161
Query: 562 TVSIGLKGSIGYIPPEHMN-GQVSILGDIYSYGILLLEMFT-GKRP 605
T S G K + + PE + + S D++S+G+L+ E+F+ GK P
Sbjct: 162 TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIP 207
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 109/225 (48%), Gaps = 22/225 (9%)
Query: 379 MSYSDISKSTDNFSKENLIGTGSFGSVYKGTLGDGTI-VAIKVLKLQQQGALKSFIDECN 437
MS + + ++ +G G FG VY+G ++ VA+K LK + ++ F+ E
Sbjct: 1 MSLDKWEMERTDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAA 59
Query: 438 ALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVI 497
+K +H N+++++ C+ E + ++ EFM+ GNL +L +++S +
Sbjct: 60 VMKEIKHPNLVQLLGVCTR---EPPFY--IITEFMTYGNLLDYLREC-----NRQEVSAV 109
Query: 498 QRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNP 557
L +A ++SA++YL H DL N L+ ++ V DFGL++ +
Sbjct: 110 VLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM------T 160
Query: 558 SKNQTVSIGLKGSIGYIPPEHMN-GQVSILGDIYSYGILLLEMFT 601
T G K I + PE + + SI D++++G+LL E+ T
Sbjct: 161 GDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 205
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 107/214 (50%), Gaps = 16/214 (7%)
Query: 395 NLIGTGSFGSVYKGTLG--DGT--IVAIKVLKLQ--QQGALKSFIDECNALKSTRHRNIL 448
++G G FGSV +G L DGT VA+K +KL Q ++ F+ E +K H N++
Sbjct: 40 KILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVI 99
Query: 449 RVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVAS 508
R++ C + +G ++ FM G+L +L S E K + + L +D+A
Sbjct: 100 RLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGP-KHIPLQTLLKFMVDIAL 158
Query: 509 ALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLK 568
++YL + H DL N +L DMT V DFGL+K ++ S + + ++ K
Sbjct: 159 GMEYLSNR---NFLHRDLAARNCMLRDDMTVCVADFGLSKKIY--SGDYYRQGRIA---K 210
Query: 569 GSIGYIPPEHMNGQV-SILGDIYSYGILLLEMFT 601
+ +I E + +V + D++++G+ + E+ T
Sbjct: 211 MPVKWIAIESLADRVYTSKSDVWAFGVTMWEIAT 244
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 108/223 (48%), Gaps = 22/223 (9%)
Query: 381 YSDISKSTDNFSKENLIGTGSFGSVYKGTLGDGTI-VAIKVLKLQQQGALKSFIDECNAL 439
Y + + ++ +G G +G VY+G ++ VA+K LK + ++ F+ E +
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVM 63
Query: 440 KSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQR 499
K +H N+++++ C+ E + ++ EFM+ GNL +L +++S +
Sbjct: 64 KEIKHPNLVQLLGVCTR---EPPFY--IIIEFMTYGNLLDYLREC-----NRQEVSAVVL 113
Query: 500 LNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSK 559
L +A ++SA++YL H DL N L+ ++ V DFGL++ +
Sbjct: 114 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM------TGD 164
Query: 560 NQTVSIGLKGSIGYIPPEHMN-GQVSILGDIYSYGILLLEMFT 601
T G K I + PE + + SI D++++G+LL E+ T
Sbjct: 165 TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 99/212 (46%), Gaps = 32/212 (15%)
Query: 394 ENLIGTGSFGSVYKGTLGDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRVITA 453
E +G G FG V+ T T VA+K +K ++++F+ E N +K+ +H ++++
Sbjct: 187 EKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSM-SVEAFLAEANVMKTLQHDKLVKLHAV 245
Query: 454 CSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYL 513
+ + ++ EFM+ G+L +L KL ++ + +A + ++
Sbjct: 246 VTKEPI------YIITEFMAKGSLLDFLKSDEGSKQPLPKL-----IDFSAQIAEGMAFI 294
Query: 514 HHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGY 573
H DL+ +N+L+ + + DFGLA+ +G K I +
Sbjct: 295 EQRN---YIHRDLRAANILVSASLVCKIADFGLAR----------------VGAKFPIKW 335
Query: 574 IPPEHMN-GQVSILGDIYSYGILLLEMFTGKR 604
PE +N G +I D++S+GILL+E+ T R
Sbjct: 336 TAPEAINFGSFTIKSDVWSFGILLMEIVTYGR 367
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 105/226 (46%), Gaps = 29/226 (12%)
Query: 384 ISKSTDNFSKENLIGTGSFGSVYKGTLGDGTIVAIKVLKLQQQGALKS--FIDECNALKS 441
I S F +E IG+G FG V+ G + VAIK +K +G++ FI+E +
Sbjct: 24 IDPSELTFVQE--IGSGQFGLVHLGYWLNKDKVAIKTIK---EGSMSEDDFIEEAEVMMK 78
Query: 442 TRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLN 501
H ++++ C LE LVFEFM +G L +L Q + L
Sbjct: 79 LSHPKLVQLYGVC----LEQAPI-CLVFEFMEHGCLSDYLRT------QRGLFAAETLLG 127
Query: 502 IAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQ 561
+ +DV + YL C + H DL N L+ ++ V DFG+ +F+ +
Sbjct: 128 MCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLD------DQY 178
Query: 562 TVSIGLKGSIGYIPPEHMN-GQVSILGDIYSYGILLLEMFT-GKRP 605
T S G K + + PE + + S D++S+G+L+ E+F+ GK P
Sbjct: 179 TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIP 224
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 108/223 (48%), Gaps = 22/223 (9%)
Query: 381 YSDISKSTDNFSKENLIGTGSFGSVYKGTLGDGTI-VAIKVLKLQQQGALKSFIDECNAL 439
Y + + ++ +G G +G VY+G ++ VA+K LK + ++ F+ E +
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVM 63
Query: 440 KSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQR 499
K +H N+++++ C+ E + ++ EFM+ GNL +L +++S +
Sbjct: 64 KEIKHPNLVQLLGVCTR---EPPFY--IIIEFMTYGNLLDYLREC-----NRQEVSAVVL 113
Query: 500 LNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSK 559
L +A ++SA++YL H DL N L+ ++ V DFGL++ +
Sbjct: 114 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM------TGD 164
Query: 560 NQTVSIGLKGSIGYIPPEHMN-GQVSILGDIYSYGILLLEMFT 601
T G K I + PE + + SI D++++G+LL E+ T
Sbjct: 165 TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 108/225 (48%), Gaps = 29/225 (12%)
Query: 397 IGTGSFGSVYKGTL------GDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRV 450
+G G+FG V+ D +VA+K LK + A + F E L +H++I+R
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 451 ITACSSVDLEGNDFKALVFEFMSNGNLDQWLHP--------SPAEHYQFKKLSVIQRLNI 502
C+ EG +VFE+M +G+L+++L + E L + Q L +
Sbjct: 109 FGVCT----EGRPL-LMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAV 163
Query: 503 AIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQT 562
A VA+ + YL H DL N L+ + + +GDFG+++ ++ +T
Sbjct: 164 ASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRT 220
Query: 563 VSIGLKGSIGYIPPEH-MNGQVSILGDIYSYGILLLEMFT-GKRP 605
+ I ++PPE + + + D++S+G++L E+FT GK+P
Sbjct: 221 ML-----PIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 260
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 97/209 (46%), Gaps = 24/209 (11%)
Query: 397 IGTGSFGSVYKGTL-GDGTIVAIKVLKLQQQGALKS-FIDECNALKSTRHRNILRVITAC 454
IG G+FG V+ G L D T+VA+K + LK+ F+ E LK H NI+R+I C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 455 SSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLH 514
+ +V E + G+ +L A +L V L + D A+ ++YL
Sbjct: 182 TQ-----KQPIYIVMELVQGGDFLTFLRTEGA------RLRVKTLLQMVGDAAAGMEYLE 230
Query: 515 HHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKG-SIGY 573
C H DL N L+ + + DFG+++ + S GL+ + +
Sbjct: 231 SKC---CIHRDLAARNCLVTEKNVLKISDFGMSR------EEADGVXAASGGLRQVPVKW 281
Query: 574 IPPEHMN-GQVSILGDIYSYGILLLEMFT 601
PE +N G+ S D++S+GILL E F+
Sbjct: 282 TAPEALNYGRYSSESDVWSFGILLWETFS 310
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 107/214 (50%), Gaps = 22/214 (10%)
Query: 390 NFSKENLIGTGSFGSVYKGTLGDGTI-VAIKVLKLQQQGALKSFIDECNALKSTRHRNIL 448
+ + ++ +G G +G VY+G ++ VA+K LK + ++ F+ E +K +H N++
Sbjct: 12 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLV 70
Query: 449 RVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVAS 508
+++ C+ E + ++ EFM+ GNL +L +++S + L +A ++S
Sbjct: 71 QLLGVCTR---EPPFY--IIIEFMTYGNLLDYLREC-----NRQEVSAVVLLYMATQISS 120
Query: 509 ALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLK 568
A++YL H DL N L+ ++ V DFGL++ + T G K
Sbjct: 121 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM------TGDTXTAHAGAK 171
Query: 569 GSIGYIPPEHMN-GQVSILGDIYSYGILLLEMFT 601
I + PE + + SI D++++G+LL E+ T
Sbjct: 172 FPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 205
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 108/225 (48%), Gaps = 29/225 (12%)
Query: 397 IGTGSFGSVYKGTL------GDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRV 450
+G G+FG V+ D +VA+K LK + A + F E L +H++I+R
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 451 ITACSSVDLEGNDFKALVFEFMSNGNLDQWLHP--------SPAEHYQFKKLSVIQRLNI 502
C+ EG +VFE+M +G+L+++L + E L + Q L +
Sbjct: 86 FGVCT----EGRPL-LMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAV 140
Query: 503 AIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQT 562
A VA+ + YL H DL N L+ + + +GDFG+++ ++ +T
Sbjct: 141 ASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRT 197
Query: 563 VSIGLKGSIGYIPPEH-MNGQVSILGDIYSYGILLLEMFT-GKRP 605
+ I ++PPE + + + D++S+G++L E+FT GK+P
Sbjct: 198 ML-----PIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 237
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 108/225 (48%), Gaps = 29/225 (12%)
Query: 397 IGTGSFGSVYKGTL------GDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRV 450
+G G+FG V+ D +VA+K LK + A + F E L +H++I+R
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 451 ITACSSVDLEGNDFKALVFEFMSNGNLDQWLHP--------SPAEHYQFKKLSVIQRLNI 502
C+ EG +VFE+M +G+L+++L + E L + Q L +
Sbjct: 80 FGVCT----EGRPL-LMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAV 134
Query: 503 AIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQT 562
A VA+ + YL H DL N L+ + + +GDFG+++ ++ +T
Sbjct: 135 ASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRT 191
Query: 563 VSIGLKGSIGYIPPEH-MNGQVSILGDIYSYGILLLEMFT-GKRP 605
+ I ++PPE + + + D++S+G++L E+FT GK+P
Sbjct: 192 ML-----PIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 231
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 110/227 (48%), Gaps = 22/227 (9%)
Query: 377 SGMSYSDISKSTDNFSKENLIGTGSFGSVYKGTLGDGTI-VAIKVLKLQQQGALKSFIDE 435
S +Y + + ++ +G G +G VY+G ++ VA+K LK + ++ F+ E
Sbjct: 6 SSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKE 64
Query: 436 CNALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLS 495
+K +H N+++++ C+ E + ++ EFM+ GNL +L +++S
Sbjct: 65 AAVMKEIKHPNLVQLLGVCTR---EPPFY--IITEFMTYGNLLDYLREC-----NRQEVS 114
Query: 496 VIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISD 555
+ L +A ++SA++YL H DL N L+ ++ V DFGL++ +
Sbjct: 115 AVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM----- 166
Query: 556 NPSKNQTVSIGLKGSIGYIPPEHMN-GQVSILGDIYSYGILLLEMFT 601
T G K I + PE + + SI D++++G+LL E+ T
Sbjct: 167 -TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 97/209 (46%), Gaps = 24/209 (11%)
Query: 397 IGTGSFGSVYKGTL-GDGTIVAIKVLKLQQQGALKS-FIDECNALKSTRHRNILRVITAC 454
IG G+FG V+ G L D T+VA+K + LK+ F+ E LK H NI+R+I C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 455 SSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLH 514
+ +V E + G+ +L A +L V L + D A+ ++YL
Sbjct: 182 TQ-----KQPIYIVMELVQGGDFLTFLRTEGA------RLRVKTLLQMVGDAAAGMEYLE 230
Query: 515 HHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKG-SIGY 573
C H DL N L+ + + DFG+++ + S GL+ + +
Sbjct: 231 SKC---CIHRDLAARNCLVTEKNVLKISDFGMSR------EEADGVYAASGGLRQVPVKW 281
Query: 574 IPPEHMN-GQVSILGDIYSYGILLLEMFT 601
PE +N G+ S D++S+GILL E F+
Sbjct: 282 TAPEALNYGRYSSESDVWSFGILLWETFS 310
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 112/251 (44%), Gaps = 25/251 (9%)
Query: 395 NLIGTGSFGSVYKGTL----GDGTIVAIKVL-KLQQQGALKSFIDECNALKSTRHRNILR 449
+IG G FG VY GTL G A+K L ++ G + F+ E +K H N+L
Sbjct: 35 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 94
Query: 450 VITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASA 509
++ C L +V +M +G+L ++ + +V + + VA
Sbjct: 95 LLGIC----LRSEGSPLVVLPYMKHGDLRNFIR------NETHNPTVKDLIGFGLQVAKG 144
Query: 510 LDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKG 569
+ YL H DL N +LD+ T V DFGLA+ +++ N+T G K
Sbjct: 145 MKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKT---GAKL 198
Query: 570 SIGYIPPEHMNGQ-VSILGDIYSYGILLLEMFT-GKRPTGDMFKDDFSIHMFVSMAL--P 625
+ ++ E + Q + D++S+G+LL E+ T G P D+ D ++++ L P
Sbjct: 199 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQP 258
Query: 626 DHVMDILDPSM 636
++ D L M
Sbjct: 259 EYCPDPLYEVM 269
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 108/223 (48%), Gaps = 22/223 (9%)
Query: 381 YSDISKSTDNFSKENLIGTGSFGSVYKGTLGDGTI-VAIKVLKLQQQGALKSFIDECNAL 439
Y + + ++ +G G +G VY+G ++ VA+K LK + ++ F+ E +
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVM 63
Query: 440 KSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQR 499
K +H N+++++ C+ E + ++ EFM+ GNL +L +++S +
Sbjct: 64 KEIKHPNLVQLLGVCTR---EPPFY--IITEFMTYGNLLDYLREC-----NRQEVSAVVL 113
Query: 500 LNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSK 559
L +A ++SA++YL H DL N L+ ++ V DFGL++ +
Sbjct: 114 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM------TGD 164
Query: 560 NQTVSIGLKGSIGYIPPEHMN-GQVSILGDIYSYGILLLEMFT 601
T G K I + PE + + SI D++++G+LL E+ T
Sbjct: 165 TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 108/223 (48%), Gaps = 22/223 (9%)
Query: 381 YSDISKSTDNFSKENLIGTGSFGSVYKGTLGDGTI-VAIKVLKLQQQGALKSFIDECNAL 439
Y + + ++ +G G +G VY+G ++ VA+K LK + ++ F+ E +
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVM 63
Query: 440 KSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQR 499
K +H N+++++ C+ E + ++ EFM+ GNL +L +++S +
Sbjct: 64 KEIKHPNLVQLLGVCTR---EPPFY--IITEFMTYGNLLDYLREC-----NRQEVSAVVL 113
Query: 500 LNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSK 559
L +A ++SA++YL H DL N L+ ++ V DFGL++ +
Sbjct: 114 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM------TGD 164
Query: 560 NQTVSIGLKGSIGYIPPEHMN-GQVSILGDIYSYGILLLEMFT 601
T G K I + PE + + SI D++++G+LL E+ T
Sbjct: 165 TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 110/227 (48%), Gaps = 22/227 (9%)
Query: 377 SGMSYSDISKSTDNFSKENLIGTGSFGSVYKGTLGDGTI-VAIKVLKLQQQGALKSFIDE 435
S +Y + + ++ +G G +G VY+G ++ VA+K LK + ++ F+ E
Sbjct: 6 SSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKE 64
Query: 436 CNALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLS 495
+K +H N+++++ C+ E + ++ EFM+ GNL +L ++++
Sbjct: 65 AAVMKEIKHPNLVQLLGVCTR---EPPFY--IIIEFMTYGNLLDYLREC-----NRQEVN 114
Query: 496 VIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISD 555
+ L +A ++SA++YL H DL N L+ ++ V DFGL++ +
Sbjct: 115 AVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM----- 166
Query: 556 NPSKNQTVSIGLKGSIGYIPPEHMN-GQVSILGDIYSYGILLLEMFT 601
T G K I + PE + + SI D++++G+LL E+ T
Sbjct: 167 -TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 95/213 (44%), Gaps = 26/213 (12%)
Query: 397 IGTGSFGSV---YKGTLGD--GTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRVI 451
+G G+FGSV L D G +VA+K L+ + L+ F E LKS +H NI++
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 81
Query: 452 TACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALD 511
C S G L+ E++ G+L +L +++ I+ L + ++
Sbjct: 82 GVCYSA---GRRNLKLIMEYLPYGSLRDYLQKHK------ERIDHIKLLQYTSQICKGME 132
Query: 512 YLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGS- 570
YL H DL N+L++ + +GDFGL K L P + + G
Sbjct: 133 YL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL------PQDKEXXKVKEPGES 183
Query: 571 --IGYIPPEHMNGQVSILGDIYSYGILLLEMFT 601
Y P + S+ D++S+G++L E+FT
Sbjct: 184 PIFWYAPESLTESKFSVASDVWSFGVVLYELFT 216
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 95/213 (44%), Gaps = 26/213 (12%)
Query: 397 IGTGSFGSV---YKGTLGD--GTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRVI 451
+G G+FGSV L D G +VA+K L+ + L+ F E LKS +H NI++
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 452 TACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALD 511
C S G L+ E++ G+L +L +++ I+ L + ++
Sbjct: 78 GVCYSA---GRRNLKLIMEYLPYGSLRDYLQKHK------ERIDHIKLLQYTSQICKGME 128
Query: 512 YLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGS- 570
YL H DL N+L++ + +GDFGL K L P + + G
Sbjct: 129 YL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL------PQDKEXXKVKEPGES 179
Query: 571 --IGYIPPEHMNGQVSILGDIYSYGILLLEMFT 601
Y P + S+ D++S+G++L E+FT
Sbjct: 180 PIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 95/213 (44%), Gaps = 26/213 (12%)
Query: 397 IGTGSFGSV---YKGTLGD--GTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRVI 451
+G G+FGSV L D G +VA+K L+ + L+ F E LKS +H NI++
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 452 TACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALD 511
C S G L+ E++ G+L +L +++ I+ L + ++
Sbjct: 78 GVCYSA---GRRNLKLIMEYLPYGSLRDYLQKHK------ERIDHIKLLQYTSQICKGME 128
Query: 512 YLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGS- 570
YL H DL N+L++ + +GDFGL K L P + + G
Sbjct: 129 YL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL------PQDKEXXKVKEPGES 179
Query: 571 --IGYIPPEHMNGQVSILGDIYSYGILLLEMFT 601
Y P + S+ D++S+G++L E+FT
Sbjct: 180 PIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 95/213 (44%), Gaps = 26/213 (12%)
Query: 397 IGTGSFGSV---YKGTLGD--GTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRVI 451
+G G+FGSV L D G +VA+K L+ + L+ F E LKS +H NI++
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 452 TACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALD 511
C S G L+ E++ G+L +L +++ I+ L + ++
Sbjct: 96 GVCYSA---GRRNLKLIMEYLPYGSLRDYLQKHK------ERIDHIKLLQYTSQICKGME 146
Query: 512 YLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGS- 570
YL H DL N+L++ + +GDFGL K L P + + G
Sbjct: 147 YL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL------PQDKEXXKVKEPGES 197
Query: 571 --IGYIPPEHMNGQVSILGDIYSYGILLLEMFT 601
Y P + S+ D++S+G++L E+FT
Sbjct: 198 PIFWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 95/213 (44%), Gaps = 26/213 (12%)
Query: 397 IGTGSFGSV---YKGTLGD--GTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRVI 451
+G G+FGSV L D G +VA+K L+ + L+ F E LKS +H NI++
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 452 TACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALD 511
C S G L+ E++ G+L +L +++ I+ L + ++
Sbjct: 81 GVCYSA---GRRNLKLIMEYLPYGSLRDYLQKHK------ERIDHIKLLQYTSQICKGME 131
Query: 512 YLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGS- 570
YL H DL N+L++ + +GDFGL K L P + + G
Sbjct: 132 YL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL------PQDKEXXKVKEPGES 182
Query: 571 --IGYIPPEHMNGQVSILGDIYSYGILLLEMFT 601
Y P + S+ D++S+G++L E+FT
Sbjct: 183 PIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 95/213 (44%), Gaps = 26/213 (12%)
Query: 397 IGTGSFGSV---YKGTLGD--GTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRVI 451
+G G+FGSV L D G +VA+K L+ + L+ F E LKS +H NI++
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 76
Query: 452 TACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALD 511
C S G L+ E++ G+L +L +++ I+ L + ++
Sbjct: 77 GVCYSA---GRRNLKLIMEYLPYGSLRDYLQKHK------ERIDHIKLLQYTSQICKGME 127
Query: 512 YLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGS- 570
YL H DL N+L++ + +GDFGL K L P + + G
Sbjct: 128 YL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL------PQDKEXXKVKEPGES 178
Query: 571 --IGYIPPEHMNGQVSILGDIYSYGILLLEMFT 601
Y P + S+ D++S+G++L E+FT
Sbjct: 179 PIFWYAPESLTESKFSVASDVWSFGVVLYELFT 211
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 95/213 (44%), Gaps = 26/213 (12%)
Query: 397 IGTGSFGSV---YKGTLGD--GTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRVI 451
+G G+FGSV L D G +VA+K L+ + L+ F E LKS +H NI++
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 452 TACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALD 511
C S G L+ E++ G+L +L +++ I+ L + ++
Sbjct: 81 GVCYSA---GRRNLKLIMEYLPYGSLRDYLQAHA------ERIDHIKLLQYTSQICKGME 131
Query: 512 YLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGS- 570
YL H DL N+L++ + +GDFGL K L P + + G
Sbjct: 132 YL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL------PQDKEXXKVKEPGES 182
Query: 571 --IGYIPPEHMNGQVSILGDIYSYGILLLEMFT 601
Y P + S+ D++S+G++L E+FT
Sbjct: 183 PIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 111/228 (48%), Gaps = 24/228 (10%)
Query: 378 GMS--YSDISKSTDNFSKENLIGTGSFGSVYKGTLGDGTI-VAIKVLKLQQQGALKSFID 434
GMS Y + + ++ +G G +G VY+G ++ VA+K LK + ++ F+
Sbjct: 1 GMSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLK 59
Query: 435 ECNALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKL 494
E +K +H N+++++ C+ E + ++ EFM+ GNL +L +++
Sbjct: 60 EAAVMKEIKHPNLVQLLGVCTR---EPPFY--IITEFMTYGNLLDYLREC-----NRQEV 109
Query: 495 SVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEIS 554
+ + L +A ++SA++YL H DL N L+ ++ V DFGL++ +
Sbjct: 110 NAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM---- 162
Query: 555 DNPSKNQTVSIGLKGSIGYIPPEHMN-GQVSILGDIYSYGILLLEMFT 601
T G K I + PE + + SI D++++G+LL E+ T
Sbjct: 163 --TGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 208
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 95/213 (44%), Gaps = 26/213 (12%)
Query: 397 IGTGSFGSV---YKGTLGD--GTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRVI 451
+G G+FGSV L D G +VA+K L+ + L+ F E LKS +H NI++
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 83
Query: 452 TACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALD 511
C S G L+ E++ G+L +L +++ I+ L + ++
Sbjct: 84 GVCYSA---GRRNLKLIMEYLPYGSLRDYLQKHK------ERIDHIKLLQYTSQICKGME 134
Query: 512 YLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGS- 570
YL H DL N+L++ + +GDFGL K L P + + G
Sbjct: 135 YL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL------PQDKEXXKVKEPGES 185
Query: 571 --IGYIPPEHMNGQVSILGDIYSYGILLLEMFT 601
Y P + S+ D++S+G++L E+FT
Sbjct: 186 PIFWYAPESLTESKFSVASDVWSFGVVLYELFT 218
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 95/213 (44%), Gaps = 26/213 (12%)
Query: 397 IGTGSFGSV---YKGTLGD--GTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRVI 451
+G G+FGSV L D G +VA+K L+ + L+ F E LKS +H NI++
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 452 TACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALD 511
C S G L+ E++ G+L +L +++ I+ L + ++
Sbjct: 96 GVCYSA---GRRNLKLIMEYLPYGSLRDYLQKHK------ERIDHIKLLQYTSQICKGME 146
Query: 512 YLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGS- 570
YL H DL N+L++ + +GDFGL K L P + + G
Sbjct: 147 YL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL------PQDKEXXKVKEPGES 197
Query: 571 --IGYIPPEHMNGQVSILGDIYSYGILLLEMFT 601
Y P + S+ D++S+G++L E+FT
Sbjct: 198 PIFWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 95/213 (44%), Gaps = 26/213 (12%)
Query: 397 IGTGSFGSV---YKGTLGD--GTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRVI 451
+G G+FGSV L D G +VA+K L+ + L+ F E LKS +H NI++
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 82
Query: 452 TACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALD 511
C S G L+ E++ G+L +L +++ I+ L + ++
Sbjct: 83 GVCYSA---GRRNLKLIMEYLPYGSLRDYLQKHK------ERIDHIKLLQYTSQICKGME 133
Query: 512 YLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGS- 570
YL H DL N+L++ + +GDFGL K L P + + G
Sbjct: 134 YL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL------PQDKEXXKVKEPGES 184
Query: 571 --IGYIPPEHMNGQVSILGDIYSYGILLLEMFT 601
Y P + S+ D++S+G++L E+FT
Sbjct: 185 PIFWYAPESLTESKFSVASDVWSFGVVLYELFT 217
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 95/213 (44%), Gaps = 26/213 (12%)
Query: 397 IGTGSFGSV---YKGTLGD--GTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRVI 451
+G G+FGSV L D G +VA+K L+ + L+ F E LKS +H NI++
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 108
Query: 452 TACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALD 511
C S G L+ E++ G+L +L +++ I+ L + ++
Sbjct: 109 GVCYSA---GRRNLKLIMEYLPYGSLRDYLQKHK------ERIDHIKLLQYTSQICKGME 159
Query: 512 YLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGS- 570
YL H DL N+L++ + +GDFGL K L P + + G
Sbjct: 160 YL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL------PQDKEXXKVKEPGES 210
Query: 571 --IGYIPPEHMNGQVSILGDIYSYGILLLEMFT 601
Y P + S+ D++S+G++L E+FT
Sbjct: 211 PIFWYAPESLTESKFSVASDVWSFGVVLYELFT 243
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 95/213 (44%), Gaps = 26/213 (12%)
Query: 397 IGTGSFGSV---YKGTLGD--GTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRVI 451
+G G+FGSV L D G +VA+K L+ + L+ F E LKS +H NI++
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 84
Query: 452 TACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALD 511
C S G L+ E++ G+L +L +++ I+ L + ++
Sbjct: 85 GVCYSA---GRRNLKLIMEYLPYGSLRDYLQKHK------ERIDHIKLLQYTSQICKGME 135
Query: 512 YLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGS- 570
YL H DL N+L++ + +GDFGL K L P + + G
Sbjct: 136 YL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL------PQDKEXXKVKEPGES 186
Query: 571 --IGYIPPEHMNGQVSILGDIYSYGILLLEMFT 601
Y P + S+ D++S+G++L E+FT
Sbjct: 187 PIFWYAPESLTESKFSVASDVWSFGVVLYELFT 219
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 95/213 (44%), Gaps = 26/213 (12%)
Query: 397 IGTGSFGSV---YKGTLGD--GTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRVI 451
+G G+FGSV L D G +VA+K L+ + L+ F E LKS +H NI++
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 75
Query: 452 TACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALD 511
C S G L+ E++ G+L +L +++ I+ L + ++
Sbjct: 76 GVCYSA---GRRNLKLIMEYLPYGSLRDYLQKHK------ERIDHIKLLQYTSQICKGME 126
Query: 512 YLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGS- 570
YL H DL N+L++ + +GDFGL K L P + + G
Sbjct: 127 YL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL------PQDKEXXKVKEPGES 177
Query: 571 --IGYIPPEHMNGQVSILGDIYSYGILLLEMFT 601
Y P + S+ D++S+G++L E+FT
Sbjct: 178 PIFWYAPESLTESKFSVASDVWSFGVVLYELFT 210
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 113/235 (48%), Gaps = 31/235 (13%)
Query: 377 SGMSYS--DISKSTDNFSKENLIGTGSFGSVYKGTLGDGTIVAIKVLKLQQQGALKS--F 432
+G+ Y +I F KE +GTG FG V G VAIK++K +G++ F
Sbjct: 12 AGLGYGSWEIDPKDLTFLKE--LGTGQFGVVKYGKWRGQYDVAIKMIK---EGSMSEDEF 66
Query: 433 IDECNALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFK 492
I+E + + H ++++ C+ + F ++ E+M+NG L +L H
Sbjct: 67 IEEAKVMMNLSHEKLVQLYGVCTK---QRPIF--IITEYMANGCLLNYLRE--MRH---- 115
Query: 493 KLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFE 552
+ Q L + DV A++YL H DL N L++ V DFGL++++ +
Sbjct: 116 RFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD 172
Query: 553 ISDNPSKNQTVSIGLKGSIGYIPPEH-MNGQVSILGDIYSYGILLLEMFT-GKRP 605
+T S+G K + + PPE M + S DI+++G+L+ E+++ GK P
Sbjct: 173 ------DEETSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMP 221
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 108/223 (48%), Gaps = 22/223 (9%)
Query: 381 YSDISKSTDNFSKENLIGTGSFGSVYKGTLGDGTI-VAIKVLKLQQQGALKSFIDECNAL 439
Y + + ++ +G G +G VY+G ++ VA+K LK + ++ F+ E +
Sbjct: 6 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVM 64
Query: 440 KSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQR 499
K +H N+++++ C+ E + ++ EFM+ GNL +L ++++ +
Sbjct: 65 KEIKHPNLVQLLGVCTR---EPPFY--IIIEFMTYGNLLDYLREC-----NRQEVNAVVL 114
Query: 500 LNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSK 559
L +A ++SA++YL H DL N L+ ++ V DFGL++ +
Sbjct: 115 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM------TGD 165
Query: 560 NQTVSIGLKGSIGYIPPEHMN-GQVSILGDIYSYGILLLEMFT 601
T G K I + PE + + SI D++++G+LL E+ T
Sbjct: 166 TXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 208
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 109/225 (48%), Gaps = 22/225 (9%)
Query: 379 MSYSDISKSTDNFSKENLIGTGSFGSVYKGTLGDGTI-VAIKVLKLQQQGALKSFIDECN 437
MS + + ++ +G G +G VY+G ++ VA+K LK + ++ F+ E
Sbjct: 1 MSLDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAA 59
Query: 438 ALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVI 497
+K +H N+++++ C+ E + ++ EFM+ GNL +L +++S +
Sbjct: 60 VMKEIKHPNLVQLLGVCTR---EPPFY--IITEFMTYGNLLDYLREC-----NRQEVSAV 109
Query: 498 QRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNP 557
L +A ++SA++YL H DL N L+ ++ V DFGL++ +
Sbjct: 110 VLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM------T 160
Query: 558 SKNQTVSIGLKGSIGYIPPEHMN-GQVSILGDIYSYGILLLEMFT 601
T G K I + PE + + SI D++++G+LL E+ T
Sbjct: 161 GDTFTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 205
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 112/251 (44%), Gaps = 25/251 (9%)
Query: 395 NLIGTGSFGSVYKGTL----GDGTIVAIKVL-KLQQQGALKSFIDECNALKSTRHRNILR 449
+IG G FG VY GTL G A+K L ++ G + F+ E +K H N+L
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 450 VITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASA 509
++ C L +V +M +G+L ++ + +V + + VA
Sbjct: 96 LLGIC----LRSEGSPLVVLPYMKHGDLRNFIRN------ETHNPTVKDLIGFGLQVAKG 145
Query: 510 LDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKG 569
+ YL H DL N +LD+ T V DFGLA+ +++ N+T G K
Sbjct: 146 MKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKT---GAKL 199
Query: 570 SIGYIPPEHMNGQ-VSILGDIYSYGILLLEMFT-GKRPTGDMFKDDFSIHMFVSMAL--P 625
+ ++ E + Q + D++S+G+LL E+ T G P D+ D ++++ L P
Sbjct: 200 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQP 259
Query: 626 DHVMDILDPSM 636
++ D L M
Sbjct: 260 EYCPDPLYEVM 270
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 110/228 (48%), Gaps = 22/228 (9%)
Query: 376 QSGMSYSDISKSTDNFSKENLIGTGSFGSVYKGTLGDGTI-VAIKVLKLQQQGALKSFID 434
Q +Y + + ++ +G G +G VY+G ++ VA+K LK + ++ F+
Sbjct: 13 QGSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLK 71
Query: 435 ECNALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKL 494
E +K +H N+++++ C+ E + ++ EFM+ GNL +L +++
Sbjct: 72 EAAVMKEIKHPNLVQLLGVCTR---EPPFY--IITEFMTYGNLLDYLREC-----NRQEV 121
Query: 495 SVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEIS 554
+ + L +A ++SA++YL H DL N L+ ++ V DFGL++ +
Sbjct: 122 NAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM---- 174
Query: 555 DNPSKNQTVSIGLKGSIGYIPPEHMN-GQVSILGDIYSYGILLLEMFT 601
T G K I + PE + + SI D++++G+LL E+ T
Sbjct: 175 --TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 220
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 112/251 (44%), Gaps = 25/251 (9%)
Query: 395 NLIGTGSFGSVYKGTL----GDGTIVAIKVL-KLQQQGALKSFIDECNALKSTRHRNILR 449
+IG G FG VY GTL G A+K L ++ G + F+ E +K H N+L
Sbjct: 55 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 114
Query: 450 VITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASA 509
++ C L +V +M +G+L ++ + +V + + VA
Sbjct: 115 LLGIC----LRSEGSPLVVLPYMKHGDLRNFIR------NETHNPTVKDLIGFGLQVAKG 164
Query: 510 LDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKG 569
+ YL H DL N +LD+ T V DFGLA+ +++ N+T G K
Sbjct: 165 MKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKT---GAKL 218
Query: 570 SIGYIPPEHMNGQ-VSILGDIYSYGILLLEMFT-GKRPTGDMFKDDFSIHMFVSMAL--P 625
+ ++ E + Q + D++S+G+LL E+ T G P D+ D ++++ L P
Sbjct: 219 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQP 278
Query: 626 DHVMDILDPSM 636
++ D L M
Sbjct: 279 EYCPDPLYEVM 289
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 107/228 (46%), Gaps = 29/228 (12%)
Query: 382 SDISKSTDNFSKENLIGTGSFGSVYKGTLGDGTIVAIKVLKLQQQGAL--KSFIDECNAL 439
S I S F +E IG+G FG V+ G + VAIK ++ +GA+ + FI+E +
Sbjct: 2 SVIDPSELTFVQE--IGSGQFGLVHLGYWLNKDKVAIKTIR---EGAMSEEDFIEEAEVM 56
Query: 440 KSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQR 499
H ++++ C LE LVFEFM +G L +L Q +
Sbjct: 57 MKLSHPKLVQLYGVC----LEQAPI-CLVFEFMEHGCLSDYLRT------QRGLFAAETL 105
Query: 500 LNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSK 559
L + +DV + YL + + H DL N L+ ++ V DFG+ +F+ +
Sbjct: 106 LGMCLDVCEGMAYLE---EASVIHRDLAARNCLVGENQVIKVSDFGMTRFVLD------D 156
Query: 560 NQTVSIGLKGSIGYIPPEHMN-GQVSILGDIYSYGILLLEMFT-GKRP 605
T S G K + + PE + + S D++S+G+L+ E+F+ GK P
Sbjct: 157 QYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIP 204
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 112/251 (44%), Gaps = 25/251 (9%)
Query: 395 NLIGTGSFGSVYKGTL----GDGTIVAIKVL-KLQQQGALKSFIDECNALKSTRHRNILR 449
+IG G FG VY GTL G A+K L ++ G + F+ E +K H N+L
Sbjct: 28 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 87
Query: 450 VITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASA 509
++ C L +V +M +G+L ++ + +V + + VA
Sbjct: 88 LLGIC----LRSEGSPLVVLPYMKHGDLRNFIRN------ETHNPTVKDLIGFGLQVAKG 137
Query: 510 LDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKG 569
+ YL H DL N +LD+ T V DFGLA+ +++ N+T G K
Sbjct: 138 MKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKT---GAKL 191
Query: 570 SIGYIPPEHMNGQ-VSILGDIYSYGILLLEMFT-GKRPTGDMFKDDFSIHMFVSMAL--P 625
+ ++ E + Q + D++S+G+LL E+ T G P D+ D ++++ L P
Sbjct: 192 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQP 251
Query: 626 DHVMDILDPSM 636
++ D L M
Sbjct: 252 EYCPDPLYEVM 262
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 95/213 (44%), Gaps = 26/213 (12%)
Query: 397 IGTGSFGSV---YKGTLGD--GTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRVI 451
+G G+FGSV L D G +VA+K L+ + L+ F E LKS +H NI++
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 452 TACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALD 511
C S G L+ E++ G+L +L +++ I+ L + ++
Sbjct: 78 GVCYSA---GRRNLKLIMEYLPYGSLRDYLQKHK------ERIDHIKLLQYTSQICKGME 128
Query: 512 YLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGS- 570
YL H DL N+L++ + +GDFGL K L P + + G
Sbjct: 129 YL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL------PQDKEFFKVKEPGES 179
Query: 571 --IGYIPPEHMNGQVSILGDIYSYGILLLEMFT 601
Y P + S+ D++S+G++L E+FT
Sbjct: 180 PIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 102/226 (45%), Gaps = 38/226 (16%)
Query: 394 ENLIGTGSFGSVYKG-TLGDGTIVAIKVLKLQQQGALKSFID----ECNALKSTRHRNIL 448
E +IG G FG VY+ +GD VA+K + + I+ E +H NI+
Sbjct: 12 EEIIGIGGFGKVYRAFWIGDE--VAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNII 69
Query: 449 RVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVAS 508
+ C E N LV EF G L++ L K++ +N A+ +A
Sbjct: 70 ALRGVCLK---EPN--LCLVMEFARGGPLNRVL--------SGKRIPPDILVNWAVQIAR 116
Query: 509 ALDYLHHHCDTPIAHCDLKPSNVLLDKDM--------TAHVGDFGLAKFLFEISDNPSKN 560
++YLH PI H DLK SN+L+ + + + DFGLA+ +
Sbjct: 117 GMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR---------EWH 167
Query: 561 QTVSIGLKGSIGYIPPEHMNGQVSILG-DIYSYGILLLEMFTGKRP 605
+T + G+ ++ PE + + G D++SYG+LL E+ TG+ P
Sbjct: 168 RTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVP 213
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 112/251 (44%), Gaps = 25/251 (9%)
Query: 395 NLIGTGSFGSVYKGTL----GDGTIVAIKVL-KLQQQGALKSFIDECNALKSTRHRNILR 449
+IG G FG VY GTL G A+K L ++ G + F+ E +K H N+L
Sbjct: 35 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 94
Query: 450 VITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASA 509
++ C L +V +M +G+L ++ + +V + + VA
Sbjct: 95 LLGIC----LRSEGSPLVVLPYMKHGDLRNFIRN------ETHNPTVKDLIGFGLQVAKG 144
Query: 510 LDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKG 569
+ YL H DL N +LD+ T V DFGLA+ +++ N+T G K
Sbjct: 145 MKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKT---GAKL 198
Query: 570 SIGYIPPEHMNGQ-VSILGDIYSYGILLLEMFT-GKRPTGDMFKDDFSIHMFVSMAL--P 625
+ ++ E + Q + D++S+G+LL E+ T G P D+ D ++++ L P
Sbjct: 199 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQP 258
Query: 626 DHVMDILDPSM 636
++ D L M
Sbjct: 259 EYCPDPLYEVM 269
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 110/227 (48%), Gaps = 22/227 (9%)
Query: 377 SGMSYSDISKSTDNFSKENLIGTGSFGSVYKGTLGDGTI-VAIKVLKLQQQGALKSFIDE 435
S +Y + + ++ +G G +G VY+G ++ VA+K LK + ++ F+ E
Sbjct: 6 SSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKE 64
Query: 436 CNALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLS 495
+K +H N+++++ C+ E + ++ EFM+ GNL +L ++++
Sbjct: 65 AAVMKEIKHPNLVQLLGVCTR---EPPFY--IITEFMTYGNLLDYLREC-----NRQEVN 114
Query: 496 VIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISD 555
+ L +A ++SA++YL H DL N L+ ++ V DFGL++ +
Sbjct: 115 AVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM----- 166
Query: 556 NPSKNQTVSIGLKGSIGYIPPEHMN-GQVSILGDIYSYGILLLEMFT 601
T G K I + PE + + SI D++++G+LL E+ T
Sbjct: 167 -TGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 112/251 (44%), Gaps = 25/251 (9%)
Query: 395 NLIGTGSFGSVYKGTL----GDGTIVAIKVL-KLQQQGALKSFIDECNALKSTRHRNILR 449
+IG G FG VY GTL G A+K L ++ G + F+ E +K H N+L
Sbjct: 31 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 90
Query: 450 VITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASA 509
++ C L +V +M +G+L ++ + +V + + VA
Sbjct: 91 LLGIC----LRSEGSPLVVLPYMKHGDLRNFIRN------ETHNPTVKDLIGFGLQVAKG 140
Query: 510 LDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKG 569
+ YL H DL N +LD+ T V DFGLA+ +++ N+T G K
Sbjct: 141 MKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKT---GAKL 194
Query: 570 SIGYIPPEHMNGQ-VSILGDIYSYGILLLEMFT-GKRPTGDMFKDDFSIHMFVSMAL--P 625
+ ++ E + Q + D++S+G+LL E+ T G P D+ D ++++ L P
Sbjct: 195 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQP 254
Query: 626 DHVMDILDPSM 636
++ D L M
Sbjct: 255 EYCPDPLYEVM 265
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 112/251 (44%), Gaps = 25/251 (9%)
Query: 395 NLIGTGSFGSVYKGTL----GDGTIVAIKVL-KLQQQGALKSFIDECNALKSTRHRNILR 449
+IG G FG VY GTL G A+K L ++ G + F+ E +K H N+L
Sbjct: 34 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 93
Query: 450 VITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASA 509
++ C L +V +M +G+L ++ + +V + + VA
Sbjct: 94 LLGIC----LRSEGSPLVVLPYMKHGDLRNFIRN------ETHNPTVKDLIGFGLQVAKG 143
Query: 510 LDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKG 569
+ YL H DL N +LD+ T V DFGLA+ +++ N+T G K
Sbjct: 144 MKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKT---GAKL 197
Query: 570 SIGYIPPEHMNGQ-VSILGDIYSYGILLLEMFT-GKRPTGDMFKDDFSIHMFVSMAL--P 625
+ ++ E + Q + D++S+G+LL E+ T G P D+ D ++++ L P
Sbjct: 198 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQP 257
Query: 626 DHVMDILDPSM 636
++ D L M
Sbjct: 258 EYCPDPLYEVM 268
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 110/227 (48%), Gaps = 22/227 (9%)
Query: 377 SGMSYSDISKSTDNFSKENLIGTGSFGSVYKGTLGDGTI-VAIKVLKLQQQGALKSFIDE 435
S +Y + + ++ +G G +G VY+G ++ VA+K LK + ++ F+ E
Sbjct: 6 SSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKE 64
Query: 436 CNALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLS 495
+K +H N+++++ C+ E + ++ EFM+ GNL +L ++++
Sbjct: 65 AAVMKEIKHPNLVQLLGVCTR---EPPFY--IITEFMTYGNLLDYLREC-----NRQEVN 114
Query: 496 VIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISD 555
+ L +A ++SA++YL H DL N L+ ++ V DFGL++ +
Sbjct: 115 AVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM----- 166
Query: 556 NPSKNQTVSIGLKGSIGYIPPEHMN-GQVSILGDIYSYGILLLEMFT 601
T G K I + PE + + SI D++++G+LL E+ T
Sbjct: 167 -TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 112/251 (44%), Gaps = 25/251 (9%)
Query: 395 NLIGTGSFGSVYKGTL----GDGTIVAIKVL-KLQQQGALKSFIDECNALKSTRHRNILR 449
+IG G FG VY GTL G A+K L ++ G + F+ E +K H N+L
Sbjct: 33 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 92
Query: 450 VITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASA 509
++ C L +V +M +G+L ++ + +V + + VA
Sbjct: 93 LLGIC----LRSEGSPLVVLPYMKHGDLRNFIRN------ETHNPTVKDLIGFGLQVAKG 142
Query: 510 LDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKG 569
+ YL H DL N +LD+ T V DFGLA+ +++ N+T G K
Sbjct: 143 MKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKT---GAKL 196
Query: 570 SIGYIPPEHMNGQ-VSILGDIYSYGILLLEMFT-GKRPTGDMFKDDFSIHMFVSMAL--P 625
+ ++ E + Q + D++S+G+LL E+ T G P D+ D ++++ L P
Sbjct: 197 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQP 256
Query: 626 DHVMDILDPSM 636
++ D L M
Sbjct: 257 EYCPDPLYEVM 267
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 112/251 (44%), Gaps = 25/251 (9%)
Query: 395 NLIGTGSFGSVYKGTL----GDGTIVAIKVL-KLQQQGALKSFIDECNALKSTRHRNILR 449
+IG G FG VY GTL G A+K L ++ G + F+ E +K H N+L
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 450 VITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASA 509
++ C L +V +M +G+L ++ + +V + + VA
Sbjct: 96 LLGIC----LRSEGSPLVVLPYMKHGDLRNFIRN------ETHNPTVKDLIGFGLQVAKG 145
Query: 510 LDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKG 569
+ YL H DL N +LD+ T V DFGLA+ +++ N+T G K
Sbjct: 146 MKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKT---GAKL 199
Query: 570 SIGYIPPEHMNGQ-VSILGDIYSYGILLLEMFT-GKRPTGDMFKDDFSIHMFVSMAL--P 625
+ ++ E + Q + D++S+G+LL E+ T G P D+ D ++++ L P
Sbjct: 200 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQP 259
Query: 626 DHVMDILDPSM 636
++ D L M
Sbjct: 260 EYCPDPLYEVM 270
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 111/247 (44%), Gaps = 25/247 (10%)
Query: 395 NLIGTGSFGSVYKGTL----GDGTIVAIKVL-KLQQQGALKSFIDECNALKSTRHRNILR 449
+IG G FG VY GTL G A+K L ++ G + F+ E +K H N+L
Sbjct: 54 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 113
Query: 450 VITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASA 509
++ C L +V +M +G+L ++ + +V + + VA
Sbjct: 114 LLGIC----LRSEGSPLVVLPYMKHGDLRNFIR------NETHNPTVKDLIGFGLQVAKG 163
Query: 510 LDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKG 569
+ YL H DL N +LD+ T V DFGLA+ +++ N+T G K
Sbjct: 164 MKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKT---GAKL 217
Query: 570 SIGYIPPEHMNGQ-VSILGDIYSYGILLLEMFT-GKRPTGDMFKDDFSIHMFVSMAL--P 625
+ ++ E + Q + D++S+G+LL E+ T G P D+ D ++++ L P
Sbjct: 218 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQP 277
Query: 626 DHVMDIL 632
++ D L
Sbjct: 278 EYCPDPL 284
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 108/227 (47%), Gaps = 25/227 (11%)
Query: 394 ENLIGTGSFGSVYKGTL---GDGTI-VAIKVLKL-QQQGALKSFIDECNALKSTRHRNIL 448
E +IG+G G V G L G + VAIK LK + + F+ E + + H NI+
Sbjct: 54 EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNII 113
Query: 449 RVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVAS 508
R+ + L +V E+M NG+LD +L + +++Q + + V +
Sbjct: 114 RLEGVVTRGRL-----AMIVTEYMENGSLDTFLRTHDGQ------FTIMQLVGMLRGVGA 162
Query: 509 ALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLK 568
+ YL D H DL NVL+D ++ V DFGL++ L D+P T + G K
Sbjct: 163 GMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVL---EDDPDAAXTTT-GGK 215
Query: 569 GSIGYIPPEHMNGQV-SILGDIYSYGILLLEMFT-GKRPTGDMFKDD 613
I + PE + + S D++S+G+++ E+ G+RP +M D
Sbjct: 216 IPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRD 262
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 108/223 (48%), Gaps = 22/223 (9%)
Query: 381 YSDISKSTDNFSKENLIGTGSFGSVYKGTLGDGTI-VAIKVLKLQQQGALKSFIDECNAL 439
Y + + ++ +G G +G VY+G ++ VA+K LK + ++ F+ E +
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVM 63
Query: 440 KSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQR 499
K +H N+++++ C+ E + ++ EFM+ GNL +L ++++ +
Sbjct: 64 KEIKHPNLVQLLGVCTR---EPPFY--IITEFMTYGNLLDYLREC-----NRQEVNAVVL 113
Query: 500 LNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSK 559
L +A ++SA++YL H DL N L+ ++ V DFGL++ +
Sbjct: 114 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM------TGD 164
Query: 560 NQTVSIGLKGSIGYIPPEHMN-GQVSILGDIYSYGILLLEMFT 601
T G K I + PE + + SI D++++G+LL E+ T
Sbjct: 165 TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 108/223 (48%), Gaps = 22/223 (9%)
Query: 381 YSDISKSTDNFSKENLIGTGSFGSVYKGTLGDGTI-VAIKVLKLQQQGALKSFIDECNAL 439
Y + + ++ +G G +G VY+G ++ VA+K LK + ++ F+ E +
Sbjct: 7 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVM 65
Query: 440 KSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQR 499
K +H N+++++ C+ E + ++ EFM+ GNL +L ++++ +
Sbjct: 66 KEIKHPNLVQLLGVCTR---EPPFY--IITEFMTYGNLLDYLREC-----NRQEVNAVVL 115
Query: 500 LNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSK 559
L +A ++SA++YL H DL N L+ ++ V DFGL++ +
Sbjct: 116 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM------TGD 166
Query: 560 NQTVSIGLKGSIGYIPPEHMN-GQVSILGDIYSYGILLLEMFT 601
T G K I + PE + + SI D++++G+LL E+ T
Sbjct: 167 TYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 108/223 (48%), Gaps = 22/223 (9%)
Query: 381 YSDISKSTDNFSKENLIGTGSFGSVYKGTLGDGTI-VAIKVLKLQQQGALKSFIDECNAL 439
Y + + ++ +G G +G VY+G ++ VA+K LK + ++ F+ E +
Sbjct: 9 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVM 67
Query: 440 KSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQR 499
K +H N+++++ C+ E + ++ EFM+ GNL +L ++++ +
Sbjct: 68 KEIKHPNLVQLLGVCTR---EPPFY--IITEFMTYGNLLDYLREC-----NRQEVNAVVL 117
Query: 500 LNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSK 559
L +A ++SA++YL H DL N L+ ++ V DFGL++ +
Sbjct: 118 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM------TGD 168
Query: 560 NQTVSIGLKGSIGYIPPEHMN-GQVSILGDIYSYGILLLEMFT 601
T G K I + PE + + SI D++++G+LL E+ T
Sbjct: 169 TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 211
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 110/227 (48%), Gaps = 22/227 (9%)
Query: 377 SGMSYSDISKSTDNFSKENLIGTGSFGSVYKGTLGDGTI-VAIKVLKLQQQGALKSFIDE 435
S +Y + + ++ +G G +G VY+G ++ VA+K LK + ++ F+ E
Sbjct: 6 SSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKE 64
Query: 436 CNALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLS 495
+K +H N+++++ C+ E + ++ EFM+ GNL +L ++++
Sbjct: 65 AAVMKEIKHPNLVQLLGVCTR---EPPFY--IITEFMTYGNLLDYLREC-----NRQEVN 114
Query: 496 VIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISD 555
+ L +A ++SA++YL H DL N L+ ++ V DFGL++ +
Sbjct: 115 AVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM----- 166
Query: 556 NPSKNQTVSIGLKGSIGYIPPEHMN-GQVSILGDIYSYGILLLEMFT 601
T G K I + PE + + SI D++++G+LL E+ T
Sbjct: 167 -TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 108/223 (48%), Gaps = 22/223 (9%)
Query: 381 YSDISKSTDNFSKENLIGTGSFGSVYKGTLGDGTI-VAIKVLKLQQQGALKSFIDECNAL 439
Y + + ++ +G G +G VY+G ++ VA+K LK + ++ F+ E +
Sbjct: 7 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVM 65
Query: 440 KSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQR 499
K +H N+++++ C+ E + ++ EFM+ GNL +L ++++ +
Sbjct: 66 KEIKHPNLVQLLGVCTR---EPPFY--IITEFMTYGNLLDYLREC-----NRQEVNAVVL 115
Query: 500 LNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSK 559
L +A ++SA++YL H DL N L+ ++ V DFGL++ +
Sbjct: 116 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM------TGD 166
Query: 560 NQTVSIGLKGSIGYIPPEHMN-GQVSILGDIYSYGILLLEMFT 601
T G K I + PE + + SI D++++G+LL E+ T
Sbjct: 167 TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 108/223 (48%), Gaps = 22/223 (9%)
Query: 381 YSDISKSTDNFSKENLIGTGSFGSVYKGTLGDGTI-VAIKVLKLQQQGALKSFIDECNAL 439
Y + + ++ +G G +G VY+G ++ VA+K LK + ++ F+ E +
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVM 63
Query: 440 KSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQR 499
K +H N+++++ C+ E + ++ EFM+ GNL +L ++++ +
Sbjct: 64 KEIKHPNLVQLLGVCTR---EPPFY--IITEFMTYGNLLDYLREC-----NRQEVNAVVL 113
Query: 500 LNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSK 559
L +A ++SA++YL H DL N L+ ++ V DFGL++ +
Sbjct: 114 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM------TGD 164
Query: 560 NQTVSIGLKGSIGYIPPEHMN-GQVSILGDIYSYGILLLEMFT 601
T G K I + PE + + SI D++++G+LL E+ T
Sbjct: 165 TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 108/223 (48%), Gaps = 22/223 (9%)
Query: 381 YSDISKSTDNFSKENLIGTGSFGSVYKGTLGDGTI-VAIKVLKLQQQGALKSFIDECNAL 439
Y + + ++ +G G +G VY+G ++ VA+K LK + ++ F+ E +
Sbjct: 7 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVM 65
Query: 440 KSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQR 499
K +H N+++++ C+ E + ++ EFM+ GNL +L ++++ +
Sbjct: 66 KEIKHPNLVQLLGVCTR---EPPFY--IITEFMTYGNLLDYLREC-----NRQEVNAVVL 115
Query: 500 LNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSK 559
L +A ++SA++YL H DL N L+ ++ V DFGL++ +
Sbjct: 116 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM------TGD 166
Query: 560 NQTVSIGLKGSIGYIPPEHMN-GQVSILGDIYSYGILLLEMFT 601
T G K I + PE + + SI D++++G+LL E+ T
Sbjct: 167 TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 108/227 (47%), Gaps = 25/227 (11%)
Query: 394 ENLIGTGSFGSVYKGTL---GDGTI-VAIKVLKL-QQQGALKSFIDECNALKSTRHRNIL 448
E +IG+G G V G L G + VAIK LK + + F+ E + + H NI+
Sbjct: 54 EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNII 113
Query: 449 RVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVAS 508
R+ + L +V E+M NG+LD +L + +++Q + + V +
Sbjct: 114 RLEGVVTRGRL-----AMIVTEYMENGSLDTFLRTHDGQ------FTIMQLVGMLRGVGA 162
Query: 509 ALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLK 568
+ YL D H DL NVL+D ++ V DFGL++ L D+P T + G K
Sbjct: 163 GMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVL---EDDPDAAYTTT-GGK 215
Query: 569 GSIGYIPPEHMNGQV-SILGDIYSYGILLLEMFT-GKRPTGDMFKDD 613
I + PE + + S D++S+G+++ E+ G+RP +M D
Sbjct: 216 IPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRD 262
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 106/220 (48%), Gaps = 29/220 (13%)
Query: 390 NFSKENLIGTGSFGSVYKGTLGDGTIVAIKVLKLQQQGALKS--FIDECNALKSTRHRNI 447
F KE +GTG FG V G VAIK++K +G++ FI+E + + H +
Sbjct: 12 TFLKE--LGTGQFGVVKYGKWRGQYDVAIKMIK---EGSMSEDEFIEEAKVMMNLSHEKL 66
Query: 448 LRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVA 507
+++ C+ + F ++ E+M+NG L +L H + Q L + DV
Sbjct: 67 VQLYGVCTK---QRPIF--IITEYMANGCLLNYLRE--MRH----RFQTQQLLEMCKDVC 115
Query: 508 SALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGL 567
A++YL H DL N L++ V DFGL++++ + T S+G
Sbjct: 116 EAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD------DEYTSSVGS 166
Query: 568 KGSIGYIPPEH-MNGQVSILGDIYSYGILLLEMFT-GKRP 605
K + + PPE M + S DI+++G+L+ E+++ GK P
Sbjct: 167 KFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMP 206
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 112/247 (45%), Gaps = 25/247 (10%)
Query: 395 NLIGTGSFGSVYKGTL----GDGTIVAIKVL-KLQQQGALKSFIDECNALKSTRHRNILR 449
+IG G FG VY GTL G A+K L ++ G + F+ E +K H N+L
Sbjct: 95 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 154
Query: 450 VITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASA 509
++ C L +V +M +G+L ++ + +V + + VA
Sbjct: 155 LLGIC----LRSEGSPLVVLPYMKHGDLRNFIR------NETHNPTVKDLIGFGLQVAKG 204
Query: 510 LDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKG 569
+ +L H DL N +LD+ T V DFGLA+ +++ + N+T G K
Sbjct: 205 MKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKT---GAKL 258
Query: 570 SIGYIPPEHMNGQ-VSILGDIYSYGILLLEMFT-GKRPTGDMFKDDFSIHMFVSMAL--P 625
+ ++ E + Q + D++S+G+LL E+ T G P D+ D ++++ L P
Sbjct: 259 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQP 318
Query: 626 DHVMDIL 632
++ D L
Sbjct: 319 EYCPDPL 325
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 106/220 (48%), Gaps = 29/220 (13%)
Query: 390 NFSKENLIGTGSFGSVYKGTLGDGTIVAIKVLKLQQQGALKS--FIDECNALKSTRHRNI 447
F KE +GTG FG V G VAIK++K +G++ FI+E + + H +
Sbjct: 11 TFLKE--LGTGQFGVVKYGKWRGQYDVAIKMIK---EGSMSEDEFIEEAKVMMNLSHEKL 65
Query: 448 LRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVA 507
+++ C+ + F ++ E+M+NG L +L H + Q L + DV
Sbjct: 66 VQLYGVCTK---QRPIF--IITEYMANGCLLNYLRE--MRH----RFQTQQLLEMCKDVC 114
Query: 508 SALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGL 567
A++YL H DL N L++ V DFGL++++ + T S+G
Sbjct: 115 EAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD------DEYTSSVGS 165
Query: 568 KGSIGYIPPEH-MNGQVSILGDIYSYGILLLEMFT-GKRP 605
K + + PPE M + S DI+++G+L+ E+++ GK P
Sbjct: 166 KFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMP 205
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 112/235 (47%), Gaps = 31/235 (13%)
Query: 377 SGMSYS--DISKSTDNFSKENLIGTGSFGSVYKGTLGDGTIVAIKVLKLQQQGALKS--F 432
+G+ Y +I F KE +GTG FG V G VAIK++K +G++ F
Sbjct: 12 AGLGYGSWEIDPKDLTFLKE--LGTGQFGVVKYGKWRGQYDVAIKMIK---EGSMSEDEF 66
Query: 433 IDECNALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFK 492
I+E + + H ++++ C+ + F ++ E+M+NG L +L H
Sbjct: 67 IEEAKVMMNLSHEKLVQLYGVCTK---QRPIF--IITEYMANGCLLNYLRE--MRH---- 115
Query: 493 KLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFE 552
+ Q L + DV A++YL H DL N L++ V DFGL++++ +
Sbjct: 116 RFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD 172
Query: 553 ISDNPSKNQTVSIGLKGSIGYIPPEH-MNGQVSILGDIYSYGILLLEMFT-GKRP 605
T S+G K + + PPE M + S DI+++G+L+ E+++ GK P
Sbjct: 173 ------DEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMP 221
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 113/251 (45%), Gaps = 25/251 (9%)
Query: 395 NLIGTGSFGSVYKGTL----GDGTIVAIKVL-KLQQQGALKSFIDECNALKSTRHRNILR 449
+IG G FG VY GTL G A+K L ++ G + F+ E +K H N+L
Sbjct: 37 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 96
Query: 450 VITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASA 509
++ C L +V +M +G+L ++ + +V + + VA
Sbjct: 97 LLGIC----LRSEGSPLVVLPYMKHGDLRNFIRN------ETHNPTVKDLIGFGLQVAKG 146
Query: 510 LDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKG 569
+ +L H DL N +LD+ T V DFGLA+ +++ + N+T G K
Sbjct: 147 MKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKT---GAKL 200
Query: 570 SIGYIPPEHMNGQ-VSILGDIYSYGILLLEMFT-GKRPTGDMFKDDFSIHMFVSMAL--P 625
+ ++ E + Q + D++S+G+LL E+ T G P D+ D ++++ L P
Sbjct: 201 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQP 260
Query: 626 DHVMDILDPSM 636
++ D L M
Sbjct: 261 EYCPDPLYEVM 271
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 106/220 (48%), Gaps = 29/220 (13%)
Query: 390 NFSKENLIGTGSFGSVYKGTLGDGTIVAIKVLKLQQQGALKS--FIDECNALKSTRHRNI 447
F KE +GTG FG V G VAIK++K +G++ FI+E + + H +
Sbjct: 7 TFLKE--LGTGQFGVVKYGKWRGQYDVAIKMIK---EGSMSEDEFIEEAKVMMNLSHEKL 61
Query: 448 LRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVA 507
+++ C+ + F ++ E+M+NG L +L H + Q L + DV
Sbjct: 62 VQLYGVCTK---QRPIF--IITEYMANGCLLNYLRE--MRH----RFQTQQLLEMCKDVC 110
Query: 508 SALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGL 567
A++YL H DL N L++ V DFGL++++ + T S+G
Sbjct: 111 EAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD------DEYTSSVGS 161
Query: 568 KGSIGYIPPEH-MNGQVSILGDIYSYGILLLEMFT-GKRP 605
K + + PPE M + S DI+++G+L+ E+++ GK P
Sbjct: 162 KFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMP 201
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 105/226 (46%), Gaps = 29/226 (12%)
Query: 384 ISKSTDNFSKENLIGTGSFGSVYKGTLGDGTIVAIKVLKLQQQGAL--KSFIDECNALKS 441
I S F +E IG+G FG V+ G + VAIK ++ +GA+ + FI+E +
Sbjct: 5 IDPSELTFVQE--IGSGQFGLVHLGYWLNKDKVAIKTIR---EGAMSEEDFIEEAEVMMK 59
Query: 442 TRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLN 501
H ++++ C LE LV EFM +G L +L Q + L
Sbjct: 60 LSHPKLVQLYGVC----LEQAPI-CLVTEFMEHGCLSDYLRT------QRGLFAAETLLG 108
Query: 502 IAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQ 561
+ +DV + YL C + H DL N L+ ++ V DFG+ +F+ +
Sbjct: 109 MCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLD------DQY 159
Query: 562 TVSIGLKGSIGYIPPEHMN-GQVSILGDIYSYGILLLEMFT-GKRP 605
T S G K + + PE + + S D++S+G+L+ E+F+ GK P
Sbjct: 160 TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIP 205
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 109/232 (46%), Gaps = 43/232 (18%)
Query: 387 STDNFSKENLIGTGSFGSVYKG-TLGDGTIVAIKVLKLQ-QQGALKSFIDECNALKSTRH 444
S+ F + +G G++ +VYKG G VA+K +KL ++G + I E + +K +H
Sbjct: 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKH 62
Query: 445 RNILRVITACSSVDLEGNDFKALVFEFMSN-----------GNLDQWLHPSPAEHYQFKK 493
NI+R+ + + LVFEFM N GN + L + +++Q++
Sbjct: 63 ENIVRLYDVIHT-----ENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQL 117
Query: 494 LSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEI 553
L L + H + I H DLKP N+L++K +GDFGLA+ F I
Sbjct: 118 LQ-------------GLAFCH---ENKILHRDLKPQNLLINKRGQLKLGDFGLAR-AFGI 160
Query: 554 SDNPSKNQTVSIGLKGSIGYIPPEHMNGQ--VSILGDIYSYGILLLEMFTGK 603
N ++ V ++ Y P+ + G S DI+S G +L EM TGK
Sbjct: 161 PVNTFSSEVV------TLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGK 206
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 106/220 (48%), Gaps = 29/220 (13%)
Query: 390 NFSKENLIGTGSFGSVYKGTLGDGTIVAIKVLKLQQQGALKS--FIDECNALKSTRHRNI 447
F KE +GTG FG V G VAIK++K +G++ FI+E + + H +
Sbjct: 18 TFLKE--LGTGQFGVVKYGKWRGQYDVAIKMIK---EGSMSEDEFIEEAKVMMNLSHEKL 72
Query: 448 LRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVA 507
+++ C+ + F ++ E+M+NG L +L H + Q L + DV
Sbjct: 73 VQLYGVCTK---QRPIF--IITEYMANGCLLNYLRE--MRH----RFQTQQLLEMCKDVC 121
Query: 508 SALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGL 567
A++YL H DL N L++ V DFGL++++ + T S+G
Sbjct: 122 EAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD------DEYTSSVGS 172
Query: 568 KGSIGYIPPEH-MNGQVSILGDIYSYGILLLEMFT-GKRP 605
K + + PPE M + S DI+++G+L+ E+++ GK P
Sbjct: 173 KFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMP 212
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 113/251 (45%), Gaps = 25/251 (9%)
Query: 395 NLIGTGSFGSVYKGTL----GDGTIVAIKVL-KLQQQGALKSFIDECNALKSTRHRNILR 449
+IG G FG VY GTL G A+K L ++ G + F+ E +K H N+L
Sbjct: 41 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 100
Query: 450 VITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASA 509
++ C L +V +M +G+L ++ + +V + + VA
Sbjct: 101 LLGIC----LRSEGSPLVVLPYMKHGDLRNFIRN------ETHNPTVKDLIGFGLQVAKG 150
Query: 510 LDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKG 569
+ +L H DL N +LD+ T V DFGLA+ +++ + N+T G K
Sbjct: 151 MKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKT---GAKL 204
Query: 570 SIGYIPPEHMNGQ-VSILGDIYSYGILLLEMFT-GKRPTGDMFKDDFSIHMFVSMAL--P 625
+ ++ E + Q + D++S+G+LL E+ T G P D+ D ++++ L P
Sbjct: 205 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQP 264
Query: 626 DHVMDILDPSM 636
++ D L M
Sbjct: 265 EYCPDPLYEVM 275
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 113/251 (45%), Gaps = 25/251 (9%)
Query: 395 NLIGTGSFGSVYKGTL----GDGTIVAIKVL-KLQQQGALKSFIDECNALKSTRHRNILR 449
+IG G FG VY GTL G A+K L ++ G + F+ E +K H N+L
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 450 VITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASA 509
++ C L +V +M +G+L ++ + +V + + VA
Sbjct: 96 LLGIC----LRSEGSPLVVLPYMKHGDLRNFIR------NETHNPTVKDLIGFGLQVAKG 145
Query: 510 LDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKG 569
+ +L H DL N +LD+ T V DFGLA+ +++ + N+T G K
Sbjct: 146 MKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKT---GAKL 199
Query: 570 SIGYIPPEHMNGQ-VSILGDIYSYGILLLEMFT-GKRPTGDMFKDDFSIHMFVSMAL--P 625
+ ++ E + Q + D++S+G+LL E+ T G P D+ D ++++ L P
Sbjct: 200 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQP 259
Query: 626 DHVMDILDPSM 636
++ D L M
Sbjct: 260 EYCPDPLYEVM 270
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 113/251 (45%), Gaps = 25/251 (9%)
Query: 395 NLIGTGSFGSVYKGTL----GDGTIVAIKVL-KLQQQGALKSFIDECNALKSTRHRNILR 449
+IG G FG VY GTL G A+K L ++ G + F+ E +K H N+L
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 450 VITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASA 509
++ C L +V +M +G+L ++ + +V + + VA
Sbjct: 96 LLGIC----LRSEGSPLVVLPYMKHGDLRNFIRN------ETHNPTVKDLIGFGLQVAKG 145
Query: 510 LDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKG 569
+ +L H DL N +LD+ T V DFGLA+ +++ + N+T G K
Sbjct: 146 MKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKT---GAKL 199
Query: 570 SIGYIPPEHMNGQ-VSILGDIYSYGILLLEMFT-GKRPTGDMFKDDFSIHMFVSMAL--P 625
+ ++ E + Q + D++S+G+LL E+ T G P D+ D ++++ L P
Sbjct: 200 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQP 259
Query: 626 DHVMDILDPSM 636
++ D L M
Sbjct: 260 EYCPDPLYEVM 270
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 113/250 (45%), Gaps = 25/250 (10%)
Query: 396 LIGTGSFGSVYKGTL----GDGTIVAIKVL-KLQQQGALKSFIDECNALKSTRHRNILRV 450
+IG G FG VY GTL G A+K L ++ G + F+ E +K H N+L +
Sbjct: 35 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 94
Query: 451 ITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASAL 510
+ C L +V +M +G+L ++ + +V + + VA +
Sbjct: 95 LGIC----LRSEGSPLVVLPYMKHGDLRNFIRN------ETHNPTVKDLIGFGLQVAKGM 144
Query: 511 DYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGS 570
+L H DL N +LD+ T V DFGLA+ +++ + N+T G K
Sbjct: 145 KFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKT---GAKLP 198
Query: 571 IGYIPPEHMNGQ-VSILGDIYSYGILLLEMFT-GKRPTGDMFKDDFSIHMFVSMAL--PD 626
+ ++ E + Q + D++S+G+LL E+ T G P D+ D ++++ L P+
Sbjct: 199 VKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPE 258
Query: 627 HVMDILDPSM 636
+ D L M
Sbjct: 259 YCPDPLYEVM 268
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 105/214 (49%), Gaps = 22/214 (10%)
Query: 390 NFSKENLIGTGSFGSVYKGTLGDGTI-VAIKVLKLQQQGALKSFIDECNALKSTRHRNIL 448
+ + ++ +G G +G VY G ++ VA+K LK + ++ F+ E +K +H N++
Sbjct: 33 DITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLV 91
Query: 449 RVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVAS 508
+++ C+ LE + +V E+M GNL +L E +++ + L +A ++S
Sbjct: 92 QLLGVCT---LEPPFY--IVTEYMPYGNLLDYLRECNRE-----EVTAVVLLYMATQISS 141
Query: 509 ALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLK 568
A++YL H DL N L+ ++ V DFGL++ + T G K
Sbjct: 142 AMEYLE---KKNFIHRDLAARNCLVGENHVVKVADFGLSRLM------TGDTYTAHAGAK 192
Query: 569 GSIGYIPPEHMN-GQVSILGDIYSYGILLLEMFT 601
I + PE + SI D++++G+LL E+ T
Sbjct: 193 FPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIAT 226
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 95/213 (44%), Gaps = 26/213 (12%)
Query: 397 IGTGSFGSV---YKGTLGD--GTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRVI 451
+G G+FGSV L D G +VA+K L+ + L+ F E LKS +H NI++
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 78
Query: 452 TACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALD 511
C S G L+ E++ G+L +L +++ I+ L + ++
Sbjct: 79 GVCYSA---GRRNLKLIMEYLPYGSLRDYLQKHK------ERIDHIKLLQYTSQICKGME 129
Query: 512 YLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGS- 570
YL H +L N+L++ + +GDFGL K L P + + G
Sbjct: 130 YL---GTKRYIHRNLATRNILVENENRVKIGDFGLTKVL------PQDKEYYKVKEPGES 180
Query: 571 --IGYIPPEHMNGQVSILGDIYSYGILLLEMFT 601
Y P + S+ D++S+G++L E+FT
Sbjct: 181 PIFWYAPESLTESKFSVASDVWSFGVVLYELFT 213
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 108/223 (48%), Gaps = 22/223 (9%)
Query: 381 YSDISKSTDNFSKENLIGTGSFGSVYKGTLGDGTI-VAIKVLKLQQQGALKSFIDECNAL 439
Y + + ++ +G G +G VY+G ++ VA+K LK + ++ F+ E +
Sbjct: 212 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVM 270
Query: 440 KSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQR 499
K +H N+++++ C+ E + ++ EFM+ GNL +L +++S +
Sbjct: 271 KEIKHPNLVQLLGVCTR---EPPFY--IITEFMTYGNLLDYLREC-----NRQEVSAVVL 320
Query: 500 LNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSK 559
L +A ++SA++YL H +L N L+ ++ V DFGL++ +
Sbjct: 321 LYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLM------TGD 371
Query: 560 NQTVSIGLKGSIGYIPPEHMN-GQVSILGDIYSYGILLLEMFT 601
T G K I + PE + + SI D++++G+LL E+ T
Sbjct: 372 TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 414
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 103/231 (44%), Gaps = 32/231 (13%)
Query: 394 ENLIGTGSFGSVYKGTLGDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRVITA 453
E ++G G+FG V K VAIK +++ + K+FI E L H NI+++ A
Sbjct: 13 EEVVGRGAFGVVCKAKW-RAKDVAIK--QIESESERKAFIVELRQLSRVNHPNIVKLYGA 69
Query: 454 CSSVDLEGNDFKALVFEFMSNGNLDQWLH-PSPAEHYQFKKLSVIQRLNIAIDVASALDY 512
C + LV E+ G+L LH P +Y + ++ + + + Y
Sbjct: 70 CLNP-------VCLVMEYAEGGSLYNVLHGAEPLPYY-----TAAHAMSWCLQCSQGVAY 117
Query: 513 LHHHCDTPIAHCDLKPSNVLLDKDMTA-HVGDFGLAKFLFEISDNPSKNQTVSIGLKGSI 571
LH + H DLKP N+LL T + DFG A QT KGS
Sbjct: 118 LHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA----------CDIQTHMTNNKGSA 167
Query: 572 GYIPPEHMNGQ-VSILGDIYSYGILLLEMFTGKRP----TGDMFKDDFSIH 617
++ PE G S D++S+GI+L E+ T ++P G F+ +++H
Sbjct: 168 AWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVH 218
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 96/237 (40%), Gaps = 46/237 (19%)
Query: 390 NFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNIL 448
+F + LIG+G FG V+K DG I+ +K + A + E AL H NI+
Sbjct: 13 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAER----EVKALAKLDHVNIV 68
Query: 449 RVITACSSVD---------LEGNDFKA---------------LVFEFMSNGNLDQWLHPS 484
D LE +D+ + EF G L+QW+
Sbjct: 69 HYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKR 128
Query: 485 PAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDF 544
E KL + L + + +DY+H + H DLKPSN+ L +GDF
Sbjct: 129 RGE-----KLDKVLALELFEQITKGVDYIHS---KKLIHRDLKPSNIFLVDTKQVKIGDF 180
Query: 545 GLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNGQ-VSILGDIYSYGILLLEMF 600
GL L KN KG++ Y+ PE ++ Q D+Y+ G++L E+
Sbjct: 181 GLVTSL--------KNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 103/231 (44%), Gaps = 32/231 (13%)
Query: 394 ENLIGTGSFGSVYKGTLGDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRVITA 453
E ++G G+FG V K VAIK +++ + K+FI E L H NI+++ A
Sbjct: 14 EEVVGRGAFGVVCKAKW-RAKDVAIK--QIESESERKAFIVELRQLSRVNHPNIVKLYGA 70
Query: 454 CSSVDLEGNDFKALVFEFMSNGNLDQWLH-PSPAEHYQFKKLSVIQRLNIAIDVASALDY 512
C + LV E+ G+L LH P +Y + ++ + + + Y
Sbjct: 71 CLNP-------VCLVMEYAEGGSLYNVLHGAEPLPYY-----TAAHAMSWCLQCSQGVAY 118
Query: 513 LHHHCDTPIAHCDLKPSNVLLDKDMTA-HVGDFGLAKFLFEISDNPSKNQTVSIGLKGSI 571
LH + H DLKP N+LL T + DFG A QT KGS
Sbjct: 119 LHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA----------CDIQTHMTNNKGSA 168
Query: 572 GYIPPEHMNGQ-VSILGDIYSYGILLLEMFTGKRP----TGDMFKDDFSIH 617
++ PE G S D++S+GI+L E+ T ++P G F+ +++H
Sbjct: 169 AWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVH 219
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 112/251 (44%), Gaps = 25/251 (9%)
Query: 395 NLIGTGSFGSVYKGTL----GDGTIVAIKVL-KLQQQGALKSFIDECNALKSTRHRNILR 449
+IG G FG VY GTL G A+K L ++ G + F+ E +K H N+L
Sbjct: 37 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 96
Query: 450 VITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASA 509
++ C L +V +M +G+L ++ + +V + + VA
Sbjct: 97 LLGIC----LRSEGSPLVVLPYMKHGDLRNFIR------NETHNPTVKDLIGFGLQVAKG 146
Query: 510 LDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKG 569
+ +L H DL N +LD+ T V DFGLA+ + + + N+T G K
Sbjct: 147 MKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKT---GAKL 200
Query: 570 SIGYIPPEHMNGQ-VSILGDIYSYGILLLEMFT-GKRPTGDMFKDDFSIHMFVSMAL--P 625
+ ++ E + Q + D++S+G+LL E+ T G P D+ D ++++ L P
Sbjct: 201 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQP 260
Query: 626 DHVMDILDPSM 636
++ D L M
Sbjct: 261 EYCPDPLYEVM 271
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 106/223 (47%), Gaps = 22/223 (9%)
Query: 381 YSDISKSTDNFSKENLIGTGSFGSVYKGTLGDGTI-VAIKVLKLQQQGALKSFIDECNAL 439
Y + + ++ +G G +G VY+G ++ VA+K LK + ++ F+ E +
Sbjct: 209 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVM 267
Query: 440 KSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQR 499
K +H N+++++ C+ ++ EFM+ GNL +L ++++ +
Sbjct: 268 KEIKHPNLVQLLGVCTR-----EPPFYIITEFMTYGNLLDYLREC-----NRQEVNAVVL 317
Query: 500 LNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSK 559
L +A ++SA++YL H +L N L+ ++ V DFGL++ +
Sbjct: 318 LYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLM------TGD 368
Query: 560 NQTVSIGLKGSIGYIPPEHMN-GQVSILGDIYSYGILLLEMFT 601
T G K I + PE + + SI D++++G+LL E+ T
Sbjct: 369 TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 411
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 105/220 (47%), Gaps = 29/220 (13%)
Query: 390 NFSKENLIGTGSFGSVYKGTLGDGTIVAIKVLKLQQQGALKS--FIDECNALKSTRHRNI 447
F KE +GTG FG V G VAIK++K +G++ FI+E + + H +
Sbjct: 12 TFLKE--LGTGQFGVVKYGKWRGQYDVAIKMIK---EGSMSEDEFIEEAKVMMNLSHEKL 66
Query: 448 LRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVA 507
+++ C+ + F ++ E+M+NG L +L H + Q L + DV
Sbjct: 67 VQLYGVCTK---QRPIF--IITEYMANGCLLNYLRE--MRH----RFQTQQLLEMCKDVC 115
Query: 508 SALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGL 567
A++YL H DL N L++ V DFGL++++ + T S G
Sbjct: 116 EAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD------DEYTSSRGS 166
Query: 568 KGSIGYIPPE-HMNGQVSILGDIYSYGILLLEMFT-GKRP 605
K + + PPE M + S DI+++G+L+ E+++ GK P
Sbjct: 167 KFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMP 206
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 104/220 (47%), Gaps = 29/220 (13%)
Query: 395 NLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQQGALK---SFIDECNALKSTRHRNILRV 450
+ +G G+FG V G G VA+K+L Q+ +L E LK RH +I+++
Sbjct: 17 DTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKL 76
Query: 451 ITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASAL 510
S+ DF +V E++S G L ++ +H + +++ + + SA+
Sbjct: 77 YQVIST----PTDF-FMVMEYVSGGELFDYI----CKHGRVEEMEARRLFQ---QILSAV 124
Query: 511 DYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGS 570
DY H H + H DLKP NVLLD M A + DFGL+ + SD + GS
Sbjct: 125 DYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMM---SDGEFLRDSC-----GS 173
Query: 571 IGYIPPEHMNGQVSI--LGDIYSYGILLLEMFTGKRPTGD 608
Y PE ++G++ DI+S G++L + G P D
Sbjct: 174 PNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDD 213
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 101/219 (46%), Gaps = 26/219 (11%)
Query: 389 DNFSKENLIGTGSFGSVYKGTLGDGTIVAIKVLKL--QQQGALKSFIDECNALKSTRHRN 446
+ + K +G G++G VYK G IVA+K ++L + +G + I E + LK H N
Sbjct: 21 EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPN 80
Query: 447 ILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDV 506
I+ +I S LVFEFM +L + L + + +Q I I +
Sbjct: 81 IVSLIDVIHS-----ERCLTLVFEFMEK-DLKKVLDENK---------TGLQDSQIKIYL 125
Query: 507 ASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIG 566
L + H I H DLKP N+L++ D + DFGLA+ F I ++ V
Sbjct: 126 YQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLAR-AFGIPVRSYTHEVV--- 181
Query: 567 LKGSIGYIPPEHMNG--QVSILGDIYSYGILLLEMFTGK 603
++ Y P+ + G + S DI+S G + EM TGK
Sbjct: 182 ---TLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 106/223 (47%), Gaps = 22/223 (9%)
Query: 381 YSDISKSTDNFSKENLIGTGSFGSVYKGTLGDGTI-VAIKVLKLQQQGALKSFIDECNAL 439
Y + + ++ +G G +G VY+G ++ VA+K LK + ++ F+ E +
Sbjct: 251 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVM 309
Query: 440 KSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQR 499
K +H N+++++ C+ ++ EFM+ GNL +L ++++ +
Sbjct: 310 KEIKHPNLVQLLGVCTR-----EPPFYIITEFMTYGNLLDYLREC-----NRQEVNAVVL 359
Query: 500 LNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSK 559
L +A ++SA++YL H +L N L+ ++ V DFGL++ +
Sbjct: 360 LYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLM------TGD 410
Query: 560 NQTVSIGLKGSIGYIPPEHMN-GQVSILGDIYSYGILLLEMFT 601
T G K I + PE + + SI D++++G+LL E+ T
Sbjct: 411 TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 453
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 104/220 (47%), Gaps = 29/220 (13%)
Query: 395 NLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQQGALK---SFIDECNALKSTRHRNILRV 450
+ +G G+FG V G G VA+K+L Q+ +L E LK RH +I+++
Sbjct: 17 DTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKL 76
Query: 451 ITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASAL 510
S+ DF +V E++S G L ++ +H + +++ + + SA+
Sbjct: 77 YQVIST----PTDF-FMVMEYVSGGELFDYI----CKHGRVEEMEARRLFQ---QILSAV 124
Query: 511 DYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGS 570
DY H H + H DLKP NVLLD M A + DFGL+ + SD + GS
Sbjct: 125 DYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMM---SDGEFLRTSC-----GS 173
Query: 571 IGYIPPEHMNGQVSI--LGDIYSYGILLLEMFTGKRPTGD 608
Y PE ++G++ DI+S G++L + G P D
Sbjct: 174 PNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDD 213
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 101/219 (46%), Gaps = 26/219 (11%)
Query: 389 DNFSKENLIGTGSFGSVYKGTLGDGTIVAIKVLKL--QQQGALKSFIDECNALKSTRHRN 446
+ + K +G G++G VYK G IVA+K ++L + +G + I E + LK H N
Sbjct: 21 EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPN 80
Query: 447 ILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDV 506
I+ +I S LVFEFM +L + L + + +Q I I +
Sbjct: 81 IVSLIDVIHS-----ERCLTLVFEFMEK-DLKKVLDENK---------TGLQDSQIKIYL 125
Query: 507 ASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIG 566
L + H I H DLKP N+L++ D + DFGLA+ F I ++ V
Sbjct: 126 YQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLAR-AFGIPVRSYTHEVV--- 181
Query: 567 LKGSIGYIPPEHMNG--QVSILGDIYSYGILLLEMFTGK 603
++ Y P+ + G + S DI+S G + EM TGK
Sbjct: 182 ---TLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 96/225 (42%), Gaps = 35/225 (15%)
Query: 390 NFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNIL 448
+F + LIG+G FG V+K DG IK +K + A + E AL H NI+
Sbjct: 12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAER----EVKALAKLDHVNIV 67
Query: 449 RVITAC----------SSVDLEGNDFKALV--FEFMSNGNLDQWLHPSPAEHYQFKKLSV 496
C SS + + K L EF G L+QW+ E KL
Sbjct: 68 HY-NGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGE-----KLDK 121
Query: 497 IQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDN 556
+ L + + +DY+H + + DLKPSN+ L +GDFGL L
Sbjct: 122 VLALELFEQITKGVDYIH---SKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSL------ 172
Query: 557 PSKNQTVSIGLKGSIGYIPPEHMNGQ-VSILGDIYSYGILLLEMF 600
KN KG++ Y+ PE ++ Q D+Y+ G++L E+
Sbjct: 173 --KNDGKRXRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 106/238 (44%), Gaps = 29/238 (12%)
Query: 397 IGTGSFGSV---YKGTLGD--GTIVAIKVLKLQQQG-ALKSFIDECNALKSTRHRNILRV 450
+G G FG V GD G VA+K LK + G + E L++ H NI++
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 451 ITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASAL 510
C+ +G + L+ EF+ +G+L ++L + K+++ Q+L A+ + +
Sbjct: 77 KGICTE---DGGNGIKLIMEFLPSGSLKEYLPKNK------NKINLKQQLKYAVQICKGM 127
Query: 511 DYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGS 570
DYL H DL NVL++ + +GDFGL K + + + TV
Sbjct: 128 DYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAI----ETDKEXXTVKDDRDSP 180
Query: 571 IGYIPPEH-MNGQVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVSMALPDH 627
+ + PE M + I D++S+G+ L E+ T D + +F+ M P H
Sbjct: 181 VFWYAPECLMQSKFYIASDVWSFGVTLHELLTY------CDSDSSPMALFLKMIGPTH 232
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 106/238 (44%), Gaps = 29/238 (12%)
Query: 397 IGTGSFGSV---YKGTLGD--GTIVAIKVLKLQQQG-ALKSFIDECNALKSTRHRNILRV 450
+G G FG V GD G VA+K LK + G + E L++ H NI++
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 451 ITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASAL 510
C+ +G + L+ EF+ +G+L ++L + K+++ Q+L A+ + +
Sbjct: 89 KGICTE---DGGNGIKLIMEFLPSGSLKEYLPKNK------NKINLKQQLKYAVQICKGM 139
Query: 511 DYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGS 570
DYL H DL NVL++ + +GDFGL K + + + TV
Sbjct: 140 DYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKAI----ETDKEXXTVKDDRDSP 192
Query: 571 IGYIPPEH-MNGQVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVSMALPDH 627
+ + PE M + I D++S+G+ L E+ T D + +F+ M P H
Sbjct: 193 VFWYAPECLMQSKFYIASDVWSFGVTLHELLTY------CDSDSSPMALFLKMIGPTH 244
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 101/215 (46%), Gaps = 31/215 (14%)
Query: 397 IGTGSFGSVYKGTLGDGTIVAIKVLKLQQQGALKS--FIDECNALKSTRHRNILRVITAC 454
+G+G FG V G VA+K++K +G++ F E + H +++ C
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIK---EGSMSEDEFFQEAQTMMKLSHPKLVKFYGVC 72
Query: 455 SSVDLEGNDFK-ALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYL 513
S ++ +V E++SNG L +L K L Q L + DV + +L
Sbjct: 73 S------KEYPIYIVTEYISNGCLLNYLRSHG------KGLEPSQLLEMCYDVCEGMAFL 120
Query: 514 HHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTV-SIGLKGSIG 572
H H DL N L+D+D+ V DFG+ +++ + +Q V S+G K +
Sbjct: 121 ESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLD-------DQYVSSVGTKFPVK 170
Query: 573 YIPPEHMNG-QVSILGDIYSYGILLLEMFT-GKRP 605
+ PE + + S D++++GIL+ E+F+ GK P
Sbjct: 171 WSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMP 205
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 107/251 (42%), Gaps = 36/251 (14%)
Query: 389 DNFSKENLIGTGSFGSVYKGTLGDGT-IVAIKVL---KLQQQGALKSFIDECNALKSTRH 444
++F +G G FG+VY I+A+KVL +L++ G E RH
Sbjct: 9 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 68
Query: 445 RNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVI--QRLNI 502
NILR+ L+ E+ G + + + +KLS QR
Sbjct: 69 PNILRLYGYFHDATR-----VYLILEYAPLGTV----------YRELQKLSKFDEQRTAT 113
Query: 503 AI-DVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQ 561
I ++A+AL Y H + H D+KP N+LL + DFG + PS +
Sbjct: 114 YITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS------CHAPSSRR 164
Query: 562 TVSIGLKGSIGYIPPEHMNGQVSILG-DIYSYGILLLEMFTGKRP-TGDMFKDDFSIHMF 619
T L G++ Y+PPE + G++ D++S G+L E GK P + +++ +
Sbjct: 165 TT---LSGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 221
Query: 620 VSMALPDHVMD 630
V PD V +
Sbjct: 222 VEFTFPDFVTE 232
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 105/251 (41%), Gaps = 36/251 (14%)
Query: 389 DNFSKENLIGTGSFGSVYKGTLGDGT-IVAIKVL---KLQQQGALKSFIDECNALKSTRH 444
++F +G G FG+VY I+A+KVL +L++ G E RH
Sbjct: 13 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 72
Query: 445 RNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAI 504
NILR+ L+ E+ G + + + +KLS A
Sbjct: 73 PNILRLYGYFHDATR-----VYLILEYAPRGEV----------YKELQKLSKFDEQRTAT 117
Query: 505 ---DVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQ 561
++A+AL Y H + H D+KP N+LL + DFG + PS +
Sbjct: 118 YITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRR 168
Query: 562 TVSIGLKGSIGYIPPEHMNGQVSILG-DIYSYGILLLEMFTGKRP-TGDMFKDDFSIHMF 619
T L G++ Y+PPE + G++ D++S G+L E GK P + +++ +
Sbjct: 169 TT---LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 225
Query: 620 VSMALPDHVMD 630
V PD V +
Sbjct: 226 VEFTFPDFVTE 236
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 97/217 (44%), Gaps = 24/217 (11%)
Query: 397 IGTGSFGSVYKGTLGDGTIVAIKVLKLQQQGALKS----FIDECNALKSTRHRNILRVIT 452
IG GSF +VYKG L T V + +LQ + KS F +E LK +H NI+R
Sbjct: 34 IGRGSFKTVYKG-LDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYD 92
Query: 453 ACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDY 512
+ S ++G LV E ++G L +L + ++ K+ V++ + + L +
Sbjct: 93 SWEST-VKGKKCIVLVTELXTSGTLKTYL-----KRFKVXKIKVLR--SWCRQILKGLQF 144
Query: 513 LHHHCDTPIAHCDLKPSNVLLDKDM-TAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSI 571
LH PI H DLK N+ + + +GD GLA K + + + G+
Sbjct: 145 LHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATL---------KRASFAKAVIGTP 194
Query: 572 GYIPPEHMNGQVSILGDIYSYGILLLEMFTGKRPTGD 608
+ PE + D+Y++G LE T + P +
Sbjct: 195 EFXAPEXYEEKYDESVDVYAFGXCXLEXATSEYPYSE 231
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 107/225 (47%), Gaps = 26/225 (11%)
Query: 387 STDNFSKENLIGTGSFGSVYKGT-LGDGTIVAIKVLKLQ--QQGALKSFIDEC---NALK 440
+T + IG G++G+VYK G VA+K +++ ++G S + E L+
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 441 STRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRL 500
+ H N++R++ C++ + LVFE + + +L +L +P + + + R
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMR- 119
Query: 501 NIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAK-FLFEISDNPSK 559
LD+LH +C I H DLKP N+L+ T + DFGLA+ + ++++ +P
Sbjct: 120 ----QFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALDP-- 170
Query: 560 NQTVSIGLKGSIGYIPPEH-MNGQVSILGDIYSYGILLLEMFTGK 603
+ ++ Y PE + + D++S G + EMF K
Sbjct: 171 -------VVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 108/251 (43%), Gaps = 36/251 (14%)
Query: 389 DNFSKENLIGTGSFGSVYKGTLGDGT-IVAIKVL---KLQQQGALKSFIDECNALKSTRH 444
++F +G G FG+VY + I+A+KVL +L++ G E RH
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 445 RNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVI--QRLNI 502
NILR+ + L+ E+ G + + + +KLS QR
Sbjct: 68 PNILRLYGY-----FHDSTRVYLILEYAPLGTV----------YRELQKLSKFDEQRTAT 112
Query: 503 AI-DVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQ 561
I ++A+AL Y H + H D+KP N+LL + DFG + PS +
Sbjct: 113 YITELANALSYCH---SKKVIHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRR 163
Query: 562 TVSIGLKGSIGYIPPEHMNGQVSILG-DIYSYGILLLEMFTGKRP-TGDMFKDDFSIHMF 619
L G++ Y+PPE + G++ D++S G+L E GK P + ++D +
Sbjct: 164 A---ALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISR 220
Query: 620 VSMALPDHVMD 630
V PD V +
Sbjct: 221 VEFTFPDFVTE 231
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 113/227 (49%), Gaps = 37/227 (16%)
Query: 390 NFSKENLIGTGSFGSVY---KGTLGD-GTIVAIKVLKLQQQGALKSFIDECNALKSTRHR 445
+F ++G GSFG V+ K T D G + A+KVLK K+ + + +++ R
Sbjct: 29 HFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLK-------KATLKVRDRVRTKMER 81
Query: 446 NILR------VITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQR 499
+IL V+ + EG + L+ +F+ G+L L ++ F + V +
Sbjct: 82 DILADVNHPFVVKLHYAFQTEGKLY--LILDFLRGGDLFTRL----SKEVMFTEEDV--K 133
Query: 500 LNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSK 559
+A ++A LD+LH I + DLKP N+LLD++ + DFGL+K E D+ K
Sbjct: 134 FYLA-ELALGLDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSK---EAIDHEKK 186
Query: 560 NQTVSIGLKGSIGYIPPEHMNGQ-VSILGDIYSYGILLLEMFTGKRP 605
+ G++ Y+ PE +N Q S D +SYG+L+ EM TG P
Sbjct: 187 AYSFC----GTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLP 229
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 114/232 (49%), Gaps = 30/232 (12%)
Query: 383 DISKSTDNFSKENLIGTGSFGSVY----KGTLGDGTIVAIKVLKLQQQGALKS---FIDE 435
++++ S+E +G GSFG VY KG + D + + + + +++ F++E
Sbjct: 21 EVAREKITMSRE--LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 78
Query: 436 CNALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLH---PSPAEHYQFK 492
+ +K +++R++ S ++ E M+ G+L +L P+ A +
Sbjct: 79 ASVMKEFNCHHVVRLLGVVSQ-----GQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLA 133
Query: 493 KLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFE 552
S+ + + +A ++A + YL+ + H DL N ++ +D T +GDFG+ + ++E
Sbjct: 134 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 190
Query: 553 ISDNPSKNQTVSIGLKG--SIGYIPPEHM-NGQVSILGDIYSYGILLLEMFT 601
+D K G KG + ++ PE + +G + D++S+G++L E+ T
Sbjct: 191 -TDYYRK------GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 114/232 (49%), Gaps = 30/232 (12%)
Query: 383 DISKSTDNFSKENLIGTGSFGSVY----KGTLGDGTIVAIKVLKLQQQGALKS---FIDE 435
++++ S+E +G GSFG VY KG + D + + + + +++ F++E
Sbjct: 11 EVAREKITMSRE--LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 68
Query: 436 CNALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLH---PSPAEHYQFK 492
+ +K +++R++ S ++ E M+ G+L +L P+ A +
Sbjct: 69 ASVMKEFNCHHVVRLLGVVSQ-----GQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLA 123
Query: 493 KLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFE 552
S+ + + +A ++A + YL+ + H DL N ++ +D T +GDFG+ + ++E
Sbjct: 124 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 180
Query: 553 ISDNPSKNQTVSIGLKG--SIGYIPPEHM-NGQVSILGDIYSYGILLLEMFT 601
+D K G KG + ++ PE + +G + D++S+G++L E+ T
Sbjct: 181 -TDYYRK------GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 225
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 105/251 (41%), Gaps = 36/251 (14%)
Query: 389 DNFSKENLIGTGSFGSVYKGTLGDGT-IVAIKVL---KLQQQGALKSFIDECNALKSTRH 444
++F +G G FG+VY I+A+KVL +L++ G E RH
Sbjct: 34 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 93
Query: 445 RNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAI 504
NILR+ L+ E+ G + + + +KLS A
Sbjct: 94 PNILRLYGYFHDATR-----VYLILEYAPLGTV----------YRELQKLSKFDEQRTAT 138
Query: 505 ---DVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQ 561
++A+AL Y H + H D+KP N+LL + DFG + PS +
Sbjct: 139 YITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRR 189
Query: 562 TVSIGLKGSIGYIPPEHMNGQVSILG-DIYSYGILLLEMFTGKRP-TGDMFKDDFSIHMF 619
T L G++ Y+PPE + G++ D++S G+L E GK P + +++ +
Sbjct: 190 TT---LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 246
Query: 620 VSMALPDHVMD 630
V PD V +
Sbjct: 247 VEFTFPDFVTE 257
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 105/251 (41%), Gaps = 36/251 (14%)
Query: 389 DNFSKENLIGTGSFGSVYKGTLGDGT-IVAIKVL---KLQQQGALKSFIDECNALKSTRH 444
++F +G G FG+VY I+A+KVL +L++ G E RH
Sbjct: 25 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 84
Query: 445 RNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAI 504
NILR+ L+ E+ G + + + +KLS A
Sbjct: 85 PNILRLYGYFHDATR-----VYLILEYAPLGTV----------YRELQKLSKFDEQRTAT 129
Query: 505 ---DVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQ 561
++A+AL Y H + H D+KP N+LL + DFG + PS +
Sbjct: 130 YITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRR 180
Query: 562 TVSIGLKGSIGYIPPEHMNGQVSILG-DIYSYGILLLEMFTGKRP-TGDMFKDDFSIHMF 619
T L G++ Y+PPE + G++ D++S G+L E GK P + +++ +
Sbjct: 181 TT---LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 237
Query: 620 VSMALPDHVMD 630
V PD V +
Sbjct: 238 VEFTFPDFVTE 248
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 101/224 (45%), Gaps = 24/224 (10%)
Query: 387 STDNFSKENLIGTGSFGSVYKGT-LGDGTIVAIKVLKLQ--QQGALKSFIDEC---NALK 440
+T + IG G++G+VYK G VA+K +++ ++G S + E L+
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 441 STRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRL 500
+ H N++R++ C++ + LVFE + + +L +L +P + + + R
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMR- 119
Query: 501 NIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKN 560
LD+LH +C I H DLKP N+L+ T + DFGLA+
Sbjct: 120 ----QFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY--------SY 164
Query: 561 QTVSIGLKGSIGYIPPEH-MNGQVSILGDIYSYGILLLEMFTGK 603
Q + ++ Y PE + + D++S G + EMF K
Sbjct: 165 QMALFPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 107/251 (42%), Gaps = 36/251 (14%)
Query: 389 DNFSKENLIGTGSFGSVYKGTLGDGT-IVAIKVL---KLQQQGALKSFIDECNALKSTRH 444
++F +G G FG+VY I+A+KVL +L++ G E RH
Sbjct: 11 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 70
Query: 445 RNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVI--QRLNI 502
NILR+ L+ E+ G + + + +KLS QR
Sbjct: 71 PNILRLYGY-----FHDATRVYLILEYAPLGTV----------YRELQKLSKFDEQRTAT 115
Query: 503 AI-DVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQ 561
I ++A+AL Y H + H D+KP N+LL + DFG + PS +
Sbjct: 116 YITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRR 166
Query: 562 TVSIGLKGSIGYIPPEHMNGQVSILG-DIYSYGILLLEMFTGKRP-TGDMFKDDFSIHMF 619
T L G++ Y+PPE + G++ D++S G+L E GK P + +++ +
Sbjct: 167 TT---LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 223
Query: 620 VSMALPDHVMD 630
V PD V +
Sbjct: 224 VEFTFPDFVTE 234
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 107/251 (42%), Gaps = 36/251 (14%)
Query: 389 DNFSKENLIGTGSFGSVYKGTLGDGT-IVAIKVL---KLQQQGALKSFIDECNALKSTRH 444
++F +G G FG+VY I+A+KVL +L++ G E RH
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 445 RNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVI--QRLNI 502
NILR+ L+ E+ G + + + +KLS QR
Sbjct: 68 PNILRLYGYFHDATR-----VYLILEYAPLGTV----------YRELQKLSKFDEQRTAT 112
Query: 503 AI-DVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQ 561
I ++A+AL Y H + H D+KP N+LL + DFG + PS +
Sbjct: 113 YITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRR 163
Query: 562 TVSIGLKGSIGYIPPEHMNGQVSILG-DIYSYGILLLEMFTGKRP-TGDMFKDDFSIHMF 619
T L G++ Y+PPE + G++ D++S G+L E GK P + +++ +
Sbjct: 164 TT---LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 220
Query: 620 VSMALPDHVMD 630
V PD V +
Sbjct: 221 VEFTFPDFVTE 231
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 90/209 (43%), Gaps = 19/209 (9%)
Query: 397 IGTGSFGSVYK-GTLGDGTIVAIKVLKL--QQQGALKSFIDECNALKSTRHRNILRVITA 453
IGTGS+G K DG I+ K L + + + E N L+ +H NI+R
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 454 CSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYL 513
+D N +V E+ G+L + E + V L + + AL
Sbjct: 74 I--ID-RTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFV---LRVMTQLTLALKEC 127
Query: 514 HHHCD--TPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSI 571
H D + H DLKP+NV LD +GDFGLA+ L + + + + G+
Sbjct: 128 HRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL-------NHDTSFAKAFVGTP 180
Query: 572 GYIPPEHMNG-QVSILGDIYSYGILLLEM 599
Y+ PE MN + DI+S G LL E+
Sbjct: 181 YYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 106/251 (42%), Gaps = 36/251 (14%)
Query: 389 DNFSKENLIGTGSFGSVYKGTLGDGT-IVAIKVL---KLQQQGALKSFIDECNALKSTRH 444
++F +G G FG+VY I+A+KVL +L++ G E RH
Sbjct: 13 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 72
Query: 445 RNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVI--QRLNI 502
NILR+ L+ E+ G + + + +KLS QR
Sbjct: 73 PNILRLYGYFHDATR-----VYLILEYAPRGEV----------YKELQKLSKFDEQRTAT 117
Query: 503 AI-DVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQ 561
I ++A+AL Y H + H D+KP N+LL + DFG + PS +
Sbjct: 118 YITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRR 168
Query: 562 TVSIGLKGSIGYIPPEHMNGQVSILG-DIYSYGILLLEMFTGKRP-TGDMFKDDFSIHMF 619
L G++ Y+PPE + G++ D++S G+L E GK P + +++ +
Sbjct: 169 XX---LXGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 225
Query: 620 VSMALPDHVMD 630
V PD V +
Sbjct: 226 VEFTFPDFVTE 236
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 106/225 (47%), Gaps = 26/225 (11%)
Query: 387 STDNFSKENLIGTGSFGSVYKGT-LGDGTIVAIKVLKLQ--QQGALKSFIDEC---NALK 440
+T + IG G++G+VYK G VA+K +++ ++G S + E L+
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 441 STRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRL 500
+ H N++R++ C++ + LVFE + + +L +L +P + + + R
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMR- 119
Query: 501 NIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAK-FLFEISDNPSK 559
LD+LH +C I H DLKP N+L+ T + DFGLA+ + ++++ P
Sbjct: 120 ----QFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAP-- 170
Query: 560 NQTVSIGLKGSIGYIPPEH-MNGQVSILGDIYSYGILLLEMFTGK 603
+ ++ Y PE + + D++S G + EMF K
Sbjct: 171 -------VVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 107/225 (47%), Gaps = 33/225 (14%)
Query: 397 IGTGSFGSVY--------KGTLGDGTIVAIKVLKLQQ-QGALKSFIDECNALKST-RHRN 446
+G G+FG V K T VA+K+LK + L I E +K +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 447 ILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPS--PAEHYQF-------KKLSVI 497
I+ ++ AC+ +G + ++ E+ S GNL ++L P + F ++LS
Sbjct: 96 IINLLGACTQ---DGPLY--VIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSK 150
Query: 498 QRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNP 557
++ A VA ++YL H DL NVL+ +D + DFGLA+ + I D
Sbjct: 151 DLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHI-DXX 206
Query: 558 SKNQTVSIGLKGSIGYIPPEHMNGQV-SILGDIYSYGILLLEMFT 601
K + +K ++ PE + ++ + D++S+G+LL E+FT
Sbjct: 207 KKTTNGRLPVK----WMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 107/251 (42%), Gaps = 36/251 (14%)
Query: 389 DNFSKENLIGTGSFGSVYKGTLGDGT-IVAIKVL---KLQQQGALKSFIDECNALKSTRH 444
++F +G G FG+VY I+A+KVL +L++ G E RH
Sbjct: 7 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 66
Query: 445 RNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVI--QRLNI 502
NILR+ L+ E+ G + + + +KLS QR
Sbjct: 67 PNILRLYGYFHDATR-----VYLILEYAPLGTV----------YRELQKLSKFDEQRTAT 111
Query: 503 AI-DVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQ 561
I ++A+AL Y H + H D+KP N+LL + DFG + PS +
Sbjct: 112 YITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRR 162
Query: 562 TVSIGLKGSIGYIPPEHMNGQVSILG-DIYSYGILLLEMFTGKRP-TGDMFKDDFSIHMF 619
T L G++ Y+PPE + G++ D++S G+L E GK P + +++ +
Sbjct: 163 TT---LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 219
Query: 620 VSMALPDHVMD 630
V PD V +
Sbjct: 220 VEFTFPDFVTE 230
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 107/251 (42%), Gaps = 36/251 (14%)
Query: 389 DNFSKENLIGTGSFGSVYKGTLGDGT-IVAIKVL---KLQQQGALKSFIDECNALKSTRH 444
++F +G G FG+VY I+A+KVL +L++ G E RH
Sbjct: 13 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 72
Query: 445 RNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVI--QRLNI 502
NILR+ L+ E+ G + + + +KLS QR
Sbjct: 73 PNILRLYGYFHDATR-----VYLILEYAPLGTV----------YRELQKLSKFDEQRTAT 117
Query: 503 AI-DVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQ 561
I ++A+AL Y H + H D+KP N+LL + DFG + PS +
Sbjct: 118 YITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRR 168
Query: 562 TVSIGLKGSIGYIPPEHMNGQVSILG-DIYSYGILLLEMFTGKRP-TGDMFKDDFSIHMF 619
T L G++ Y+PPE + G++ D++S G+L E GK P + +++ +
Sbjct: 169 TT---LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 225
Query: 620 VSMALPDHVMD 630
V PD V +
Sbjct: 226 VEFTFPDFVTE 236
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 102/217 (47%), Gaps = 26/217 (11%)
Query: 397 IGTGSFGSVYKGTLG------DGTIVAIKVLK--LQQQGALKSFIDECNALKSTRHRNIL 448
+G G+FG VY+G + VA+K L +Q L F+ E + H+NI+
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDEL-DFLMEALIISKLNHQNIV 97
Query: 449 RVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVAS 508
R C V L+ + ++ E M+ G+L +L + Q L+++ L++A D+A
Sbjct: 98 R----CIGVSLQSLP-RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIAC 152
Query: 509 ALDYLHHHCDTPIAHCDLKPSNVLLD---KDMTAHVGDFGLAKFLFEISDNPSKNQTVSI 565
YL + H D+ N LL A +GDFG+A+ ++ S K +
Sbjct: 153 GCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY-RKGGCAML 208
Query: 566 GLKGSIGYIPPE-HMNGQVSILGDIYSYGILLLEMFT 601
+K ++PPE M G + D +S+G+LL E+F+
Sbjct: 209 PVK----WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 107/251 (42%), Gaps = 36/251 (14%)
Query: 389 DNFSKENLIGTGSFGSVYKGTLGDGT-IVAIKVL---KLQQQGALKSFIDECNALKSTRH 444
++F +G G FG+VY I+A+KVL +L++ G E RH
Sbjct: 12 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 71
Query: 445 RNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVI--QRLNI 502
NILR+ L+ E+ G + + + +KLS QR
Sbjct: 72 PNILRLYGYFHDATR-----VYLILEYAPLGTV----------YRELQKLSKFDEQRTAT 116
Query: 503 AI-DVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQ 561
I ++A+AL Y H + H D+KP N+LL + DFG + PS +
Sbjct: 117 YITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRR 167
Query: 562 TVSIGLKGSIGYIPPEHMNGQVSILG-DIYSYGILLLEMFTGKRP-TGDMFKDDFSIHMF 619
T L G++ Y+PPE + G++ D++S G+L E GK P + +++ +
Sbjct: 168 TT---LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 224
Query: 620 VSMALPDHVMD 630
V PD V +
Sbjct: 225 VEFTFPDFVTE 235
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 107/251 (42%), Gaps = 36/251 (14%)
Query: 389 DNFSKENLIGTGSFGSVYKGTLGDGT-IVAIKVL---KLQQQGALKSFIDECNALKSTRH 444
++F +G G FG+VY I+A+KVL +L++ G E RH
Sbjct: 11 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 70
Query: 445 RNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVI--QRLNI 502
NILR+ L+ E+ G + + + +KLS QR
Sbjct: 71 PNILRLYGYFHDATR-----VYLILEYAPLGTV----------YRELQKLSKFDEQRTAT 115
Query: 503 AI-DVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQ 561
I ++A+AL Y H + H D+KP N+LL + DFG + PS +
Sbjct: 116 YITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRR 166
Query: 562 TVSIGLKGSIGYIPPEHMNGQVSILG-DIYSYGILLLEMFTGKRP-TGDMFKDDFSIHMF 619
T L G++ Y+PPE + G++ D++S G+L E GK P + +++ +
Sbjct: 167 TT---LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 223
Query: 620 VSMALPDHVMD 630
V PD V +
Sbjct: 224 VEFTFPDFVTE 234
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 102/217 (47%), Gaps = 26/217 (11%)
Query: 397 IGTGSFGSVYKGTLG------DGTIVAIKVLK--LQQQGALKSFIDECNALKSTRHRNIL 448
+G G+FG VY+G + VA+K L +Q L F+ E + H+NI+
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDEL-DFLMEALIISKLNHQNIV 111
Query: 449 RVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVAS 508
R C V L+ + ++ E M+ G+L +L + Q L+++ L++A D+A
Sbjct: 112 R----CIGVSLQSLP-RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIAC 166
Query: 509 ALDYLHHHCDTPIAHCDLKPSNVLLD---KDMTAHVGDFGLAKFLFEISDNPSKNQTVSI 565
YL + H D+ N LL A +GDFG+A+ ++ S K +
Sbjct: 167 GCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY-RKGGCAML 222
Query: 566 GLKGSIGYIPPE-HMNGQVSILGDIYSYGILLLEMFT 601
+K ++PPE M G + D +S+G+LL E+F+
Sbjct: 223 PVK----WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 102/217 (47%), Gaps = 26/217 (11%)
Query: 397 IGTGSFGSVYKGTLG------DGTIVAIKVLK--LQQQGALKSFIDECNALKSTRHRNIL 448
+G G+FG VY+G + VA+K L +Q L F+ E + H+NI+
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDEL-DFLMEALIISKFNHQNIV 96
Query: 449 RVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVAS 508
R C V L+ + ++ E M+ G+L +L + Q L+++ L++A D+A
Sbjct: 97 R----CIGVSLQSLP-RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIAC 151
Query: 509 ALDYLHHHCDTPIAHCDLKPSNVLLD---KDMTAHVGDFGLAKFLFEISDNPSKNQTVSI 565
YL + H D+ N LL A +GDFG+A+ ++ S K +
Sbjct: 152 GCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY-RKGGCAML 207
Query: 566 GLKGSIGYIPPE-HMNGQVSILGDIYSYGILLLEMFT 601
+K ++PPE M G + D +S+G+LL E+F+
Sbjct: 208 PVK----WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 90/209 (43%), Gaps = 19/209 (9%)
Query: 397 IGTGSFGSVYK-GTLGDGTIVAIKVLKL--QQQGALKSFIDECNALKSTRHRNILRVITA 453
IGTGS+G K DG I+ K L + + + E N L+ +H NI+R
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 454 CSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYL 513
+D N +V E+ G+L + E + V L + + AL
Sbjct: 74 I--ID-RTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFV---LRVMTQLTLALKEC 127
Query: 514 HHHCD--TPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSI 571
H D + H DLKP+NV LD +GDFGLA+ L + ++ + G+
Sbjct: 128 HRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL-------NHDEDFAKEFVGTP 180
Query: 572 GYIPPEHMNG-QVSILGDIYSYGILLLEM 599
Y+ PE MN + DI+S G LL E+
Sbjct: 181 YYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 107/225 (47%), Gaps = 33/225 (14%)
Query: 397 IGTGSFGSVY--------KGTLGDGTIVAIKVLKLQQ-QGALKSFIDECNALKST-RHRN 446
+G G+FG V K T VA+K+LK + L I E +K +H+N
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 447 ILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPS--PAEHYQF-------KKLSVI 497
I+ ++ AC+ +G + ++ E+ S GNL ++L P Y + ++LS
Sbjct: 137 IINLLGACTQ---DGPLY--VIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSK 191
Query: 498 QRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNP 557
++ A VA ++YL H DL NVL+ +D + DFGLA+ + I D
Sbjct: 192 DLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHI-DYY 247
Query: 558 SKNQTVSIGLKGSIGYIPPEHMNGQV-SILGDIYSYGILLLEMFT 601
K + +K ++ PE + ++ + D++S+G+LL E+FT
Sbjct: 248 KKTTNGRLPVK----WMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 102/217 (47%), Gaps = 26/217 (11%)
Query: 397 IGTGSFGSVYKGTLG------DGTIVAIKVLK--LQQQGALKSFIDECNALKSTRHRNIL 448
+G G+FG VY+G + VA+K L +Q L F+ E + H+NI+
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDEL-DFLMEALIISKFNHQNIV 88
Query: 449 RVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVAS 508
R C V L+ + ++ E M+ G+L +L + Q L+++ L++A D+A
Sbjct: 89 R----CIGVSLQSLP-RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIAC 143
Query: 509 ALDYLHHHCDTPIAHCDLKPSNVLLD---KDMTAHVGDFGLAKFLFEISDNPSKNQTVSI 565
YL + H D+ N LL A +GDFG+A+ ++ S K +
Sbjct: 144 GCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY-RKGGCAML 199
Query: 566 GLKGSIGYIPPE-HMNGQVSILGDIYSYGILLLEMFT 601
+K ++PPE M G + D +S+G+LL E+F+
Sbjct: 200 PVK----WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 232
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 102/217 (47%), Gaps = 26/217 (11%)
Query: 397 IGTGSFGSVYKGTLG------DGTIVAIKVLK--LQQQGALKSFIDECNALKSTRHRNIL 448
+G G+FG VY+G + VA+K L +Q L F+ E + H+NI+
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDEL-DFLMEALIISKFNHQNIV 113
Query: 449 RVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVAS 508
R C V L+ + ++ E M+ G+L +L + Q L+++ L++A D+A
Sbjct: 114 R----CIGVSLQSLP-RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIAC 168
Query: 509 ALDYLHHHCDTPIAHCDLKPSNVLLD---KDMTAHVGDFGLAKFLFEISDNPSKNQTVSI 565
YL + H D+ N LL A +GDFG+A+ ++ S K +
Sbjct: 169 GCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY-RKGGCAML 224
Query: 566 GLKGSIGYIPPE-HMNGQVSILGDIYSYGILLLEMFT 601
+K ++PPE M G + D +S+G+LL E+F+
Sbjct: 225 PVK----WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 257
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 102/217 (47%), Gaps = 26/217 (11%)
Query: 397 IGTGSFGSVYKGTLG------DGTIVAIKVLK--LQQQGALKSFIDECNALKSTRHRNIL 448
+G G+FG VY+G + VA+K L +Q L F+ E + H+NI+
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDEL-DFLMEALIISKFNHQNIV 96
Query: 449 RVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVAS 508
R C V L+ + ++ E M+ G+L +L + Q L+++ L++A D+A
Sbjct: 97 R----CIGVSLQSLP-RFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIAC 151
Query: 509 ALDYLHHHCDTPIAHCDLKPSNVLLD---KDMTAHVGDFGLAKFLFEISDNPSKNQTVSI 565
YL + H D+ N LL A +GDFG+A+ ++ S K +
Sbjct: 152 GCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY-RKGGCAML 207
Query: 566 GLKGSIGYIPPE-HMNGQVSILGDIYSYGILLLEMFT 601
+K ++PPE M G + D +S+G+LL E+F+
Sbjct: 208 PVK----WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 107/225 (47%), Gaps = 33/225 (14%)
Query: 397 IGTGSFGSVY--------KGTLGDGTIVAIKVLKLQQ-QGALKSFIDECNALKST-RHRN 446
+G G+FG V K T VA+K+LK + L I E +K +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 447 ILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPS--PAEHYQF-------KKLSVI 497
I+ ++ AC+ +G + ++ E+ S GNL ++L P Y + ++LS
Sbjct: 96 IINLLGACTQ---DGPLY--VIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSK 150
Query: 498 QRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNP 557
++ A VA ++YL H DL NVL+ +D + DFGLA+ + I D
Sbjct: 151 DLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHI-DYY 206
Query: 558 SKNQTVSIGLKGSIGYIPPEHMNGQV-SILGDIYSYGILLLEMFT 601
K + +K ++ PE + ++ + D++S+G+LL E+FT
Sbjct: 207 KKTTNGRLPVK----WMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 102/217 (47%), Gaps = 26/217 (11%)
Query: 397 IGTGSFGSVYKGTLG------DGTIVAIKVLK--LQQQGALKSFIDECNALKSTRHRNIL 448
+G G+FG VY+G + VA+K L +Q L F+ E + H+NI+
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDEL-DFLMEALIISKFNHQNIV 97
Query: 449 RVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVAS 508
R C V L+ + ++ E M+ G+L +L + Q L+++ L++A D+A
Sbjct: 98 R----CIGVSLQSLP-RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIAC 152
Query: 509 ALDYLHHHCDTPIAHCDLKPSNVLLD---KDMTAHVGDFGLAKFLFEISDNPSKNQTVSI 565
YL + H D+ N LL A +GDFG+A+ ++ S K +
Sbjct: 153 GCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY-RKGGCAML 208
Query: 566 GLKGSIGYIPPE-HMNGQVSILGDIYSYGILLLEMFT 601
+K ++PPE M G + D +S+G+LL E+F+
Sbjct: 209 PVK----WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 107/225 (47%), Gaps = 33/225 (14%)
Query: 397 IGTGSFGSVY--------KGTLGDGTIVAIKVLKLQQ-QGALKSFIDECNALKST-RHRN 446
+G G+FG V K T VA+K+LK + L I E +K +H+N
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 447 ILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPS--PAEHYQF-------KKLSVI 497
I+ ++ AC+ +G + ++ E+ S GNL ++L P Y + ++LS
Sbjct: 89 IINLLGACTQ---DGPLY--VIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSK 143
Query: 498 QRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNP 557
++ A VA ++YL H DL NVL+ +D + DFGLA+ + I D
Sbjct: 144 DLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHI-DYY 199
Query: 558 SKNQTVSIGLKGSIGYIPPEHMNGQV-SILGDIYSYGILLLEMFT 601
K + +K ++ PE + ++ + D++S+G+LL E+FT
Sbjct: 200 KKTTNGRLPVK----WMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 102/217 (47%), Gaps = 26/217 (11%)
Query: 397 IGTGSFGSVYKGTLG------DGTIVAIKVLK--LQQQGALKSFIDECNALKSTRHRNIL 448
+G G+FG VY+G + VA+K L +Q L F+ E + H+NI+
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDEL-DFLMEALIISKFNHQNIV 103
Query: 449 RVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVAS 508
R C V L+ + ++ E M+ G+L +L + Q L+++ L++A D+A
Sbjct: 104 R----CIGVSLQSLP-RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIAC 158
Query: 509 ALDYLHHHCDTPIAHCDLKPSNVLLD---KDMTAHVGDFGLAKFLFEISDNPSKNQTVSI 565
YL + H D+ N LL A +GDFG+A+ ++ S K +
Sbjct: 159 GCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY-RKGGCAML 214
Query: 566 GLKGSIGYIPPE-HMNGQVSILGDIYSYGILLLEMFT 601
+K ++PPE M G + D +S+G+LL E+F+
Sbjct: 215 PVK----WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 247
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 107/225 (47%), Gaps = 33/225 (14%)
Query: 397 IGTGSFGSVY--------KGTLGDGTIVAIKVLKLQQ-QGALKSFIDECNALKST-RHRN 446
+G G+FG V K T VA+K+LK + L I E +K +H+N
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 447 ILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPS--PAEHYQF-------KKLSVI 497
I+ ++ AC+ +G + ++ E+ S GNL ++L P Y + ++LS
Sbjct: 85 IINLLGACTQ---DGPLY--VIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSK 139
Query: 498 QRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNP 557
++ A VA ++YL H DL NVL+ +D + DFGLA+ + I D
Sbjct: 140 DLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHI-DYY 195
Query: 558 SKNQTVSIGLKGSIGYIPPEHMNGQV-SILGDIYSYGILLLEMFT 601
K + +K ++ PE + ++ + D++S+G+LL E+FT
Sbjct: 196 KKTTNGRLPVK----WMAPEALFDRIYTHQSDVWSFGVLLWEIFT 236
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 104/251 (41%), Gaps = 36/251 (14%)
Query: 389 DNFSKENLIGTGSFGSVYKGTLGDGT-IVAIKVL---KLQQQGALKSFIDECNALKSTRH 444
++F +G G FG+VY I+A+KVL +L++ G E RH
Sbjct: 13 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 72
Query: 445 RNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAI 504
NILR+ L+ E+ G + + + +KLS A
Sbjct: 73 PNILRLYGYFHDATR-----VYLILEYAPLGTV----------YRELQKLSKFDEQRTAT 117
Query: 505 ---DVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQ 561
++A+AL Y H + H D+KP N+LL + DFG + PS +
Sbjct: 118 YITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRR 168
Query: 562 TVSIGLKGSIGYIPPEHMNGQVSILG-DIYSYGILLLEMFTGKRP-TGDMFKDDFSIHMF 619
T L G++ Y+PPE + G+ D++S G+L E GK P + +++ +
Sbjct: 169 TT---LCGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 225
Query: 620 VSMALPDHVMD 630
V PD V +
Sbjct: 226 VEFTFPDFVTE 236
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 107/251 (42%), Gaps = 36/251 (14%)
Query: 389 DNFSKENLIGTGSFGSVYKGTLGDGT-IVAIKVL---KLQQQGALKSFIDECNALKSTRH 444
++F +G G FG+VY I+A+KVL +L++ G E RH
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 445 RNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVI--QRLNI 502
NILR+ L+ E+ G + + + +KLS QR
Sbjct: 68 PNILRLYGYFHDATR-----VYLILEYAPLGTV----------YRELQKLSKFDEQRTAT 112
Query: 503 AI-DVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQ 561
I ++A+AL Y H + H D+KP N+LL + DFG + PS +
Sbjct: 113 YITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRR 163
Query: 562 TVSIGLKGSIGYIPPEHMNGQVSILG-DIYSYGILLLEMFTGKRP-TGDMFKDDFSIHMF 619
T L G++ Y+PPE + G++ D++S G+L E GK P + +++ +
Sbjct: 164 T---DLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 220
Query: 620 VSMALPDHVMD 630
V PD V +
Sbjct: 221 VEFTFPDFVTE 231
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 107/225 (47%), Gaps = 33/225 (14%)
Query: 397 IGTGSFGSVY--------KGTLGDGTIVAIKVLKLQQ-QGALKSFIDECNALKST-RHRN 446
+G G+FG V K T VA+K+LK + L I E +K +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 447 ILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPS--PAEHYQF-------KKLSVI 497
I+ ++ AC+ +G + ++ E+ S GNL ++L P Y + ++LS
Sbjct: 96 IINLLGACTQ---DGPLY--VIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSK 150
Query: 498 QRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNP 557
++ A VA ++YL H DL NVL+ +D + DFGLA+ + I D
Sbjct: 151 DLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHI-DYY 206
Query: 558 SKNQTVSIGLKGSIGYIPPEHMNGQV-SILGDIYSYGILLLEMFT 601
K + +K ++ PE + ++ + D++S+G+LL E+FT
Sbjct: 207 KKTTNGRLPVK----WMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 107/225 (47%), Gaps = 33/225 (14%)
Query: 397 IGTGSFGSVY--------KGTLGDGTIVAIKVLKLQQ-QGALKSFIDECNALKST-RHRN 446
+G G+FG V K T VA+K+LK + L I E +K +H+N
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 447 ILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPS--PAEHYQF-------KKLSVI 497
I+ ++ AC+ +G + ++ E+ S GNL ++L P Y + ++LS
Sbjct: 88 IINLLGACTQ---DGPLY--VIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSK 142
Query: 498 QRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNP 557
++ A VA ++YL H DL NVL+ +D + DFGLA+ + I D
Sbjct: 143 DLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHI-DYY 198
Query: 558 SKNQTVSIGLKGSIGYIPPEHMNGQV-SILGDIYSYGILLLEMFT 601
K + +K ++ PE + ++ + D++S+G+LL E+FT
Sbjct: 199 KKTTNGRLPVK----WMAPEALFDRIYTHQSDVWSFGVLLWEIFT 239
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 107/251 (42%), Gaps = 36/251 (14%)
Query: 389 DNFSKENLIGTGSFGSVYKGTLGDGT-IVAIKVL---KLQQQGALKSFIDECNALKSTRH 444
++F +G G FG+VY I+A+KVL +L++ G E RH
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 445 RNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVI--QRLNI 502
NILR+ L+ E+ G + + + +KLS QR
Sbjct: 68 PNILRLYGYFHDATR-----VYLILEYAPLGTV----------YRELQKLSKFDEQRTAT 112
Query: 503 AI-DVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQ 561
I ++A+AL Y H + H D+KP N+LL + DFG + PS +
Sbjct: 113 YITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRR 163
Query: 562 TVSIGLKGSIGYIPPEHMNGQVSILG-DIYSYGILLLEMFTGKRP-TGDMFKDDFSIHMF 619
T L G++ Y+PPE + G++ D++S G+L E GK P + +++ +
Sbjct: 164 T---ELCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 220
Query: 620 VSMALPDHVMD 630
V PD V +
Sbjct: 221 VEFTFPDFVTE 231
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 106/216 (49%), Gaps = 37/216 (17%)
Query: 397 IGTGSFGSVYKGTLGD--GTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRVITAC 454
IG G FG V LGD G VA+K +K ++F+ E + + RH N+++++
Sbjct: 29 IGKGEFGDV---MLGDYRGNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLLGVI 83
Query: 455 SSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQ---RLNIAIDVASALD 511
V+ +G + +V E+M+ G+L +L + SV+ L ++DV A++
Sbjct: 84 --VEEKGGLY--IVTEYMAKGSLVDYLRS--------RGRSVLGGDCLLKFSLDVCEAME 131
Query: 512 YLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSI 571
YL + H DL NVL+ +D A V DFGL K + S T + +K
Sbjct: 132 YLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTK------EASSTQDTGKLPVK--- 179
Query: 572 GYIPPEHMN-GQVSILGDIYSYGILLLEMFT-GKRP 605
+ PE + + S D++S+GILL E+++ G+ P
Sbjct: 180 -WTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVP 214
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 90/209 (43%), Gaps = 19/209 (9%)
Query: 397 IGTGSFGSVYK-GTLGDGTIVAIKVLKL--QQQGALKSFIDECNALKSTRHRNILRVITA 453
IGTGS+G K DG I+ K L + + + E N L+ +H NI+R
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 454 CSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYL 513
+D N +V E+ G+L + E + V L + + AL
Sbjct: 74 I--ID-RTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFV---LRVMTQLTLALKEC 127
Query: 514 HHHCD--TPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSI 571
H D + H DLKP+NV LD +GDFGLA+ L + + + + G+
Sbjct: 128 HRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL-------NHDTSFAKTFVGTP 180
Query: 572 GYIPPEHMNG-QVSILGDIYSYGILLLEM 599
Y+ PE MN + DI+S G LL E+
Sbjct: 181 YYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 107/251 (42%), Gaps = 36/251 (14%)
Query: 389 DNFSKENLIGTGSFGSVYKGTLGDGT-IVAIKVL---KLQQQGALKSFIDECNALKSTRH 444
++F +G G FG+VY I+A+KVL +L++ G E RH
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 445 RNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVI--QRLNI 502
NILR+ L+ E+ G + + + +KLS QR
Sbjct: 68 PNILRLYGYFHDATR-----VYLILEYAPLGTV----------YRELQKLSKFDEQRTAT 112
Query: 503 AI-DVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQ 561
I ++A+AL Y H + H D+KP N+LL + DFG + PS +
Sbjct: 113 YITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRR 163
Query: 562 TVSIGLKGSIGYIPPEHMNGQVSILG-DIYSYGILLLEMFTGKRP-TGDMFKDDFSIHMF 619
T L G++ Y+PPE + G++ D++S G+L E GK P + +++ +
Sbjct: 164 TX---LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 220
Query: 620 VSMALPDHVMD 630
V PD V +
Sbjct: 221 VEFTFPDFVTE 231
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 102/217 (47%), Gaps = 26/217 (11%)
Query: 397 IGTGSFGSVYKGTLG------DGTIVAIKVLK--LQQQGALKSFIDECNALKSTRHRNIL 448
+G G+FG VY+G + VA+K L +Q L F+ E + H+NI+
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDEL-DFLMEALIISKFNHQNIV 111
Query: 449 RVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVAS 508
R C V L+ + ++ E M+ G+L +L + Q L+++ L++A D+A
Sbjct: 112 R----CIGVSLQSLP-RFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIAC 166
Query: 509 ALDYLHHHCDTPIAHCDLKPSNVLLD---KDMTAHVGDFGLAKFLFEISDNPSKNQTVSI 565
YL + H D+ N LL A +GDFG+A+ ++ S K +
Sbjct: 167 GCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY-RKGGCAML 222
Query: 566 GLKGSIGYIPPE-HMNGQVSILGDIYSYGILLLEMFT 601
+K ++PPE M G + D +S+G+LL E+F+
Sbjct: 223 PVK----WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 107/251 (42%), Gaps = 36/251 (14%)
Query: 389 DNFSKENLIGTGSFGSVYKGTLGDGT-IVAIKVL---KLQQQGALKSFIDECNALKSTRH 444
++F +G G FG+VY I+A+KVL +L++ G E RH
Sbjct: 5 EDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 64
Query: 445 RNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVI--QRLNI 502
NILR+ L+ E+ G + + + +KLS QR
Sbjct: 65 PNILRLYGYFHDATR-----VYLILEYAPLGTV----------YRELQKLSKFDEQRTAT 109
Query: 503 AI-DVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQ 561
I ++A+AL Y H + H D+KP N+LL + DFG + PS +
Sbjct: 110 YITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRR 160
Query: 562 TVSIGLKGSIGYIPPEHMNGQVSILG-DIYSYGILLLEMFTGKRP-TGDMFKDDFSIHMF 619
T L G++ Y+PPE + G++ D++S G+L E GK P + +++ +
Sbjct: 161 TT---LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 217
Query: 620 VSMALPDHVMD 630
V PD V +
Sbjct: 218 VEFTFPDFVTE 228
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 104/216 (48%), Gaps = 37/216 (17%)
Query: 397 IGTGSFGSVYKGTLGD--GTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRVITAC 454
IG G FG V LGD G VA+K +K ++F+ E + + RH N+++++
Sbjct: 20 IGKGEFGDV---MLGDYRGNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLL--- 71
Query: 455 SSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQ---RLNIAIDVASALD 511
V +E +V E+M+ G+L ++ + + SV+ L ++DV A++
Sbjct: 72 -GVIVEEKGGLYIVTEYMAKGSL--------VDYLRSRGRSVLGGDCLLKFSLDVCEAME 122
Query: 512 YLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSI 571
YL + H DL NVL+ +D A V DFGL K + S T + +K
Sbjct: 123 YLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTK------EASSTQDTGKLPVK--- 170
Query: 572 GYIPPEHMN-GQVSILGDIYSYGILLLEMFT-GKRP 605
+ PE + S D++S+GILL E+++ G+ P
Sbjct: 171 -WTAPEALREAAFSTKSDVWSFGILLWEIYSFGRVP 205
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 122/260 (46%), Gaps = 34/260 (13%)
Query: 387 STDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKL--QQQGALKSFIDECNALKSTR 443
S +NF K IG G++G VYK G +VA+K ++L + +G + I E + LK
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 444 HRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIA 503
H NI++++ + E + LVFEF+S +L +++ S L +I+ +
Sbjct: 62 HPNIVKLLDVIHT---ENKLY--LVFEFLSM-DLKKFMDASALTGIP---LPLIK--SYL 110
Query: 504 IDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTV 563
+ L + H H + H DLKP N+L++ + + DFGLA+ F + ++ V
Sbjct: 111 FQLLQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVV 166
Query: 564 SIGLKGSIGYIPPEHMNG--QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSI----H 617
++ Y PE + G S DI+S G + EM T + +F D I
Sbjct: 167 ------TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQLFR 216
Query: 618 MFVSMALPDHVMDILDPSMP 637
+F ++ PD V+ SMP
Sbjct: 217 IFRTLGTPDEVVWPGVTSMP 236
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 122/260 (46%), Gaps = 34/260 (13%)
Query: 387 STDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKL--QQQGALKSFIDECNALKSTR 443
S +NF K IG G++G VYK G +VA+K ++L + +G + I E + LK
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 444 HRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIA 503
H NI++++ + E + LVFEF+S +L +++ S L +I+ +
Sbjct: 64 HPNIVKLLDVIHT---ENKLY--LVFEFLSM-DLKKFMDASALTGIP---LPLIK--SYL 112
Query: 504 IDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTV 563
+ L + H H + H DLKP N+L++ + + DFGLA+ F + ++ V
Sbjct: 113 FQLLQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVV 168
Query: 564 SIGLKGSIGYIPPEHMNG--QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSI----H 617
++ Y PE + G S DI+S G + EM T + +F D I
Sbjct: 169 ------TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQLFR 218
Query: 618 MFVSMALPDHVMDILDPSMP 637
+F ++ PD V+ SMP
Sbjct: 219 IFRTLGTPDEVVWPGVTSMP 238
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 102/217 (47%), Gaps = 26/217 (11%)
Query: 397 IGTGSFGSVYKGTLG------DGTIVAIKVLK--LQQQGALKSFIDECNALKSTRHRNIL 448
+G G+FG VY+G + VA+K L +Q L F+ E + H+NI+
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDEL-DFLMEALIISKFNHQNIV 111
Query: 449 RVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVAS 508
R C V L+ + ++ E M+ G+L +L + Q L+++ L++A D+A
Sbjct: 112 R----CIGVSLQSLP-RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIAC 166
Query: 509 ALDYLHHHCDTPIAHCDLKPSNVLLD---KDMTAHVGDFGLAKFLFEISDNPSKNQTVSI 565
YL + H D+ N LL A +GDFG+A+ ++ S K +
Sbjct: 167 GCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY-RKGGCAML 222
Query: 566 GLKGSIGYIPPE-HMNGQVSILGDIYSYGILLLEMFT 601
+K ++PPE M G + D +S+G+LL E+F+
Sbjct: 223 PVK----WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 102/217 (47%), Gaps = 26/217 (11%)
Query: 397 IGTGSFGSVYKGTLG------DGTIVAIKVLK--LQQQGALKSFIDECNALKSTRHRNIL 448
+G G+FG VY+G + VA+K L +Q L F+ E + H+NI+
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDEL-DFLMEALIISKFNHQNIV 123
Query: 449 RVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVAS 508
R C V L+ + ++ E M+ G+L +L + Q L+++ L++A D+A
Sbjct: 124 R----CIGVSLQSLP-RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIAC 178
Query: 509 ALDYLHHHCDTPIAHCDLKPSNVLLD---KDMTAHVGDFGLAKFLFEISDNPSKNQTVSI 565
YL + H D+ N LL A +GDFG+A+ ++ S K +
Sbjct: 179 GCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY-RKGGCAML 234
Query: 566 GLKGSIGYIPPE-HMNGQVSILGDIYSYGILLLEMFT 601
+K ++PPE M G + D +S+G+LL E+F+
Sbjct: 235 PVK----WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 267
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 107/251 (42%), Gaps = 36/251 (14%)
Query: 389 DNFSKENLIGTGSFGSVYKGTLGDGT-IVAIKVL---KLQQQGALKSFIDECNALKSTRH 444
++F +G G FG+VY I+A+KVL +L++ G E RH
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 445 RNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVI--QRLNI 502
NILR+ L+ E+ G + + + +KLS QR
Sbjct: 68 PNILRLYGYFHDATR-----VYLILEYAPLGTV----------YRELQKLSKFDEQRTAT 112
Query: 503 AI-DVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQ 561
I ++A+AL Y H + H D+KP N+LL + DFG + PS +
Sbjct: 113 YITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRR 163
Query: 562 TVSIGLKGSIGYIPPEHMNGQVSILG-DIYSYGILLLEMFTGKRP-TGDMFKDDFSIHMF 619
T L G++ Y+PPE + G++ D++S G+L E GK P + +++ +
Sbjct: 164 T---DLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 220
Query: 620 VSMALPDHVMD 630
V PD V +
Sbjct: 221 VEFTFPDFVTE 231
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 103/216 (47%), Gaps = 37/216 (17%)
Query: 397 IGTGSFGSVYKGTLGD--GTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRVITAC 454
IG G FG V LGD G VA+K +K ++F+ E + + RH N+++++
Sbjct: 14 IGKGEFGDV---MLGDYRGNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLL--- 65
Query: 455 SSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQ---RLNIAIDVASALD 511
V +E +V E+M+ G+L ++ + + SV+ L ++DV A++
Sbjct: 66 -GVIVEEKGGLYIVTEYMAKGSL--------VDYLRSRGRSVLGGDCLLKFSLDVCEAME 116
Query: 512 YLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSI 571
YL H DL NVL+ +D A V DFGL K + T G K +
Sbjct: 117 YLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTK---------EASSTQDTG-KLPV 163
Query: 572 GYIPPEHMN-GQVSILGDIYSYGILLLEMFT-GKRP 605
+ PE + + S D++S+GILL E+++ G+ P
Sbjct: 164 KWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVP 199
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 107/251 (42%), Gaps = 36/251 (14%)
Query: 389 DNFSKENLIGTGSFGSVYKGTLGDGT-IVAIKVL---KLQQQGALKSFIDECNALKSTRH 444
++F +G G FG+VY I+A+KVL +L++ G E RH
Sbjct: 13 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 72
Query: 445 RNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVI--QRLNI 502
NILR+ L+ E+ G + + + +KLS QR
Sbjct: 73 PNILRLYGYFHDATR-----VYLILEYAPLGTV----------YRELQKLSKFDEQRTAT 117
Query: 503 AI-DVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQ 561
I ++A+AL Y H + H D+KP N+LL + DFG + PS +
Sbjct: 118 YITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRR 168
Query: 562 TVSIGLKGSIGYIPPEHMNGQVSILG-DIYSYGILLLEMFTGKRP-TGDMFKDDFSIHMF 619
T L G++ Y+PPE + G++ D++S G+L E GK P + +++ +
Sbjct: 169 T---DLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 225
Query: 620 VSMALPDHVMD 630
V PD V +
Sbjct: 226 VEFTFPDFVTE 236
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 107/251 (42%), Gaps = 36/251 (14%)
Query: 389 DNFSKENLIGTGSFGSVYKGTLGDGT-IVAIKVL---KLQQQGALKSFIDECNALKSTRH 444
++F +G G FG+VY I+A+KVL +L++ G E RH
Sbjct: 9 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 68
Query: 445 RNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVI--QRLNI 502
NILR+ L+ E+ G + + + +KLS QR
Sbjct: 69 PNILRLYGYFHDATR-----VYLILEYAPLGTV----------YRELQKLSKFDEQRTAT 113
Query: 503 AI-DVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQ 561
I ++A+AL Y H + H D+KP N+LL + DFG + PS +
Sbjct: 114 YITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRR 164
Query: 562 TVSIGLKGSIGYIPPEHMNGQVSILG-DIYSYGILLLEMFTGKRP-TGDMFKDDFSIHMF 619
T L G++ Y+PPE + G++ D++S G+L E GK P + +++ +
Sbjct: 165 T---DLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 221
Query: 620 VSMALPDHVMD 630
V PD V +
Sbjct: 222 VEFTFPDFVTE 232
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 101/220 (45%), Gaps = 29/220 (13%)
Query: 395 NLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQQGALK---SFIDECNALKSTRHRNILRV 450
+ +G G+FG V G G VA+K+L Q+ +L E LK RH +I+++
Sbjct: 22 DTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKL 81
Query: 451 ITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASAL 510
S+ + F +V E++S G L ++ + +L + + + S +
Sbjct: 82 YQVIST---PSDIF--MVMEYVSGGELFDYI-------CKNGRLDEKESRRLFQQILSGV 129
Query: 511 DYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGS 570
DY H H + H DLKP NVLLD M A + DFGL+ + SD + GS
Sbjct: 130 DYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMM---SDGEFLRXSC-----GS 178
Query: 571 IGYIPPEHMNGQVSI--LGDIYSYGILLLEMFTGKRPTGD 608
Y PE ++G++ DI+S G++L + G P D
Sbjct: 179 PNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDD 218
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 118/263 (44%), Gaps = 35/263 (13%)
Query: 384 ISKSTDNFSKENLIGTGSFGSVYKG-TLGDGTIVAIKVL---KLQQQGALKSFIDECNAL 439
I + ++F NL+G GSF VY+ ++ G VAIK++ + + G ++ +E
Sbjct: 6 IGEKIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIH 65
Query: 440 KSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQR 499
+H +IL + E +++ LV E NG ++++L + K S +
Sbjct: 66 CQLKHPSILELYNY-----FEDSNYVYLVLEMCHNGEMNRYLKN------RVKPFSENEA 114
Query: 500 LNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSK 559
+ + + + YLH H I H DL SN+LL ++M + DFGLA ++ K
Sbjct: 115 RHFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLAT---QLKMPHEK 168
Query: 560 NQTVSIGLKGSIGYIPPEHMNGQVSIL-GDIYSYGILLLEMFTGKRP-TGDMFKD----- 612
+ T L G+ YI PE L D++S G + + G+ P D K+
Sbjct: 169 HYT----LCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKV 224
Query: 613 ---DFSIHMFVSMALPDHVMDIL 632
D+ + F+S+ D + +L
Sbjct: 225 VLADYEMPSFLSIEAKDLIHQLL 247
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 117/247 (47%), Gaps = 38/247 (15%)
Query: 368 GTIPKEVRQSGMSYSDISKSTDNFSKENLIGTGSFGSVY----KGTLGDGTIVAIKVLKL 423
G++P E ++++ S+E +G GSFG VY KG + D + + +
Sbjct: 1 GSVPDE--------WEVAREKITMSRE--LGQGSFGMVYEGVAKGVVKDEPETRVAIKTV 50
Query: 424 QQQGALKS---FIDECNALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQW 480
+ +++ F++E + +K +++R++ S ++ E M+ G+L +
Sbjct: 51 NEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQ-----GQPTLVIMELMTRGDLKSY 105
Query: 481 LH---PSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDM 537
L P + S+ + + +A ++A + YL+ + H DL N ++ +D
Sbjct: 106 LRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDF 162
Query: 538 TAHVGDFGLAKFLFEISDNPSKNQTVSIGLKG--SIGYIPPEHM-NGQVSILGDIYSYGI 594
T +GDFG+ + ++E +D K G KG + ++ PE + +G + D++S+G+
Sbjct: 163 TVKIGDFGMTRDIYE-TDYYRK------GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGV 215
Query: 595 LLLEMFT 601
+L E+ T
Sbjct: 216 VLWEIAT 222
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 102/217 (47%), Gaps = 26/217 (11%)
Query: 397 IGTGSFGSVYKGTLG------DGTIVAIKVLK--LQQQGALKSFIDECNALKSTRHRNIL 448
+G G+FG VY+G + VA+K L +Q L F+ E + H+NI+
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDEL-DFLMEALIISKFNHQNIV 97
Query: 449 RVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVAS 508
R C V L+ + ++ E M+ G+L +L + Q L+++ L++A D+A
Sbjct: 98 R----CIGVSLQSLP-RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIAC 152
Query: 509 ALDYLHHHCDTPIAHCDLKPSNVLLD---KDMTAHVGDFGLAKFLFEISDNPSKNQTVSI 565
YL + H D+ N LL A +GDFG+A+ ++ S K +
Sbjct: 153 GCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYY-RKGGCAML 208
Query: 566 GLKGSIGYIPPE-HMNGQVSILGDIYSYGILLLEMFT 601
+K ++PPE M G + D +S+G+LL E+F+
Sbjct: 209 PVK----WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 102/216 (47%), Gaps = 37/216 (17%)
Query: 397 IGTGSFGSVYKGTLGD--GTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRVITAC 454
IG G FG V LGD G VA+K +K ++F+ E + + RH N+++++
Sbjct: 201 IGKGEFGDV---MLGDYRGNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLL--- 252
Query: 455 SSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQ---RLNIAIDVASALD 511
V +E +V E+M+ G+L +L + SV+ L ++DV A++
Sbjct: 253 -GVIVEEKGGLYIVTEYMAKGSLVDYLRS--------RGRSVLGGDCLLKFSLDVCEAME 303
Query: 512 YLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSI 571
YL H DL NVL+ +D A V DFGL K + T G K +
Sbjct: 304 YLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTK---------EASSTQDTG-KLPV 350
Query: 572 GYIPPEHMN-GQVSILGDIYSYGILLLEMFT-GKRP 605
+ PE + + S D++S+GILL E+++ G+ P
Sbjct: 351 KWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVP 386
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 94/218 (43%), Gaps = 28/218 (12%)
Query: 397 IGTGSFGSVYKGTL----GDGTIVAIKVLK---LQQQGALKSFIDECNALKSTRHRNILR 449
+G GSFG V +G G VA+K LK L Q A+ FI E NA+ S HRN++R
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 450 VITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASA 509
+ + ++ +V E G+L L H+ LS A+ VA
Sbjct: 86 LYGVVLTPPMK------MVTELAPLGSLLDRLRKHQG-HFLLGTLS-----RYAVQVAEG 133
Query: 510 LDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKG 569
+ YL H DL N+LL +GDFGL + L + D+ + +
Sbjct: 134 MGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKV---- 186
Query: 570 SIGYIPPEHMNGQV-SILGDIYSYGILLLEMFT-GKRP 605
+ PE + + S D + +G+ L EMFT G+ P
Sbjct: 187 PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 224
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 94/218 (43%), Gaps = 28/218 (12%)
Query: 397 IGTGSFGSVYKGTL----GDGTIVAIKVLK---LQQQGALKSFIDECNALKSTRHRNILR 449
+G GSFG V +G G VA+K LK L Q A+ FI E NA+ S HRN++R
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 450 VITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASA 509
+ + ++ +V E G+L L H+ LS A+ VA
Sbjct: 76 LYGVVLTPPMK------MVTELAPLGSLLDRLRKHQG-HFLLGTLS-----RYAVQVAEG 123
Query: 510 LDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKG 569
+ YL H DL N+LL +GDFGL + L + D+ + +
Sbjct: 124 MGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKV---- 176
Query: 570 SIGYIPPEHMNGQV-SILGDIYSYGILLLEMFT-GKRP 605
+ PE + + S D + +G+ L EMFT G+ P
Sbjct: 177 PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 117/249 (46%), Gaps = 51/249 (20%)
Query: 397 IGTGSFGSVYKGT------LGDGTIVAIKVLKLQQQGALKS-FIDECNALKSTRHRNILR 449
IG G+FG V++ T+VA+K+LK + +++ F E + + NI++
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 450 VITACSSVDLEGNDFKALVFEFMSNGNLDQWLH-----------------------PSPA 486
++ C+ G L+FE+M+ G+L+++L P P
Sbjct: 115 LLGVCAV----GKPM-CLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGP- 168
Query: 487 EHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGL 546
LS ++L IA VA+ + YL + H DL N L+ ++M + DFGL
Sbjct: 169 -----PPLSCAEQLCIARQVAAGMAYLS---ERKFVHRDLATRNCLVGENMVVKIADFGL 220
Query: 547 AKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHM-NGQVSILGDIYSYGILLLEMFT-GKR 604
++ ++ +D + +I ++ ++PPE + + + D+++YG++L E+F+ G +
Sbjct: 221 SRNIYS-ADYYKADGNDAIPIR----WMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQ 275
Query: 605 PTGDMFKDD 613
P M ++
Sbjct: 276 PYYGMAHEE 284
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 107/225 (47%), Gaps = 33/225 (14%)
Query: 397 IGTGSFGSVY--------KGTLGDGTIVAIKVLKLQQ-QGALKSFIDECNALKST-RHRN 446
+G G+FG V K T VA+K+LK + L I E +K +H+N
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 447 ILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPS--PAEHYQF-------KKLSVI 497
I+ ++ AC+ +G + ++ E+ S GNL ++L P Y + ++LS
Sbjct: 81 IINLLGACTQ---DGPLY--VIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSK 135
Query: 498 QRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNP 557
++ A VA ++YL H DL NVL+ +D + DFGLA+ + I D
Sbjct: 136 DLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHI-DYY 191
Query: 558 SKNQTVSIGLKGSIGYIPPEHMNGQV-SILGDIYSYGILLLEMFT 601
K + +K ++ PE + ++ + D++S+G+LL E+FT
Sbjct: 192 KKTTNGRLPVK----WMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 112/232 (48%), Gaps = 30/232 (12%)
Query: 383 DISKSTDNFSKENLIGTGSFGSVY----KGTLGDGTIVAIKVLKLQQQGALKS---FIDE 435
++++ S+E +G GSFG VY KG + D + + + + +++ F++E
Sbjct: 14 EVAREKITMSRE--LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 71
Query: 436 CNALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLH---PSPAEHYQFK 492
+ +K +++R++ S ++ E M+ G+L +L P +
Sbjct: 72 ASVMKEFNCHHVVRLLGVVSQ-----GQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 126
Query: 493 KLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFE 552
S+ + + +A ++A + YL+ + H DL N ++ +D T +GDFG+ + ++E
Sbjct: 127 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 183
Query: 553 ISDNPSKNQTVSIGLKG--SIGYIPPEHM-NGQVSILGDIYSYGILLLEMFT 601
+D K G KG + ++ PE + +G + D++S+G++L E+ T
Sbjct: 184 -TDYYRK------GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 107/225 (47%), Gaps = 33/225 (14%)
Query: 397 IGTGSFGSVY--------KGTLGDGTIVAIKVLKLQQ-QGALKSFIDECNALKST-RHRN 446
+G G+FG V K T VA+K+LK + L I E +K +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 447 ILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPS--PAEHYQF-------KKLSVI 497
I+ ++ AC+ +G + ++ E+ S GNL ++L P Y + ++LS
Sbjct: 96 IINLLGACTQ---DGPLY--VIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSK 150
Query: 498 QRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNP 557
++ A VA ++YL H DL NVL+ +D + DFGLA+ + I D
Sbjct: 151 DLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHI-DYY 206
Query: 558 SKNQTVSIGLKGSIGYIPPEHMNGQV-SILGDIYSYGILLLEMFT 601
K + +K ++ PE + ++ + D++S+G+LL E+FT
Sbjct: 207 KKTTNGRLPVK----WMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 111/235 (47%), Gaps = 28/235 (11%)
Query: 373 EVRQSGMSYSDISKSTDNFSKENLIGTGSFGSVYKGT-LGDGTIVAIKVLKLQQQGALKS 431
E +S +S D K F K IG G+ G+VY + G VAI+ + LQQQ +
Sbjct: 7 EKLRSIVSVGDPKKKYTRFEK---IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKEL 63
Query: 432 FIDECNALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQF 491
I+E ++ ++ NI+ + + L G++ +V E+++ G+L + + + Q
Sbjct: 64 IINEILVMRENKNPNIVNYLDSY----LVGDEL-WVVMEYLAGGSLTDVVTETCMDEGQI 118
Query: 492 KKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLF 551
+ + AL++LH + + H D+K N+LL D + + DFG F
Sbjct: 119 AA--------VCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFG---FCA 164
Query: 552 EISDNPSKNQTVSIGLKGSIGYIPPEHMNGQV-SILGDIYSYGILLLEMFTGKRP 605
+I+ SK T + G+ ++ PE + + DI+S GI+ +EM G+ P
Sbjct: 165 QITPEQSKRST----MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 122/260 (46%), Gaps = 34/260 (13%)
Query: 387 STDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKL--QQQGALKSFIDECNALKSTR 443
S +NF K IG G++G VYK G +VA+K ++L + +G + I E + LK
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 64
Query: 444 HRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIA 503
H NI++++ + E + LVFEF+ + +L +++ S L +I+ +
Sbjct: 65 HPNIVKLLDVIHT---ENKLY--LVFEFL-HQDLKKFMDASALTGI---PLPLIK--SYL 113
Query: 504 IDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTV 563
+ L + H H + H DLKP N+L++ + + DFGLA+ F + ++ V
Sbjct: 114 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVV 169
Query: 564 SIGLKGSIGYIPPEHMNG--QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSI----H 617
++ Y PE + G S DI+S G + EM T + +F D I
Sbjct: 170 ------TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQLFR 219
Query: 618 MFVSMALPDHVMDILDPSMP 637
+F ++ PD V+ SMP
Sbjct: 220 IFRTLGTPDEVVWPGVTSMP 239
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 108/251 (43%), Gaps = 36/251 (14%)
Query: 389 DNFSKENLIGTGSFGSVYKGTLGDGT-IVAIKVL---KLQQQGALKSFIDECNALKSTRH 444
++F +G G FG+VY I+A+KVL +L++ G E RH
Sbjct: 10 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 69
Query: 445 RNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVI--QRLNI 502
NILR+ L+ E+ G + + + +KLS QR
Sbjct: 70 PNILRLYGYFHDATR-----VYLILEYAPLGTV----------YRELQKLSKFDEQRTAT 114
Query: 503 AI-DVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQ 561
I ++A+AL Y H + H D+KP N+LL G+ +A F + + S+
Sbjct: 115 YITELANALSYCH---SKRVIHRDIKPENLLL-----GSAGELKIANFGWSVHAPSSRRT 166
Query: 562 TVSIGLKGSIGYIPPEHMNGQVSILG-DIYSYGILLLEMFTGKRP-TGDMFKDDFSIHMF 619
T L G++ Y+PPE + G++ D++S G+L E GK P + +++ +
Sbjct: 167 T----LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 222
Query: 620 VSMALPDHVMD 630
V PD V +
Sbjct: 223 VEFTFPDFVTE 233
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 121/260 (46%), Gaps = 34/260 (13%)
Query: 387 STDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKL--QQQGALKSFIDECNALKSTR 443
S +NF K IG G++G VYK G +VA+K ++L + +G + I E + LK
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 444 HRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIA 503
H NI++++ + E + LVFEF+S +L ++ S L +I+ +
Sbjct: 64 HPNIVKLLDVIHT---ENKLY--LVFEFLSM-DLKDFMDASALTGI---PLPLIK--SYL 112
Query: 504 IDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTV 563
+ L + H H + H DLKP N+L++ + + DFGLA+ F + ++ V
Sbjct: 113 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVV 168
Query: 564 SIGLKGSIGYIPPEHMNG--QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSI----H 617
++ Y PE + G S DI+S G + EM T + +F D I
Sbjct: 169 ------TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQLFR 218
Query: 618 MFVSMALPDHVMDILDPSMP 637
+F ++ PD V+ SMP
Sbjct: 219 IFRTLGTPDEVVWPGVTSMP 238
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 122/260 (46%), Gaps = 34/260 (13%)
Query: 387 STDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKL--QQQGALKSFIDECNALKSTR 443
S +NF K IG G++G VYK G +VA+K ++L + +G + I E + LK
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 444 HRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIA 503
H NI++++ + E + LVFEF+ + +L +++ S L +I+ +
Sbjct: 64 HPNIVKLLDVIHT---ENKLY--LVFEFL-HQDLKKFMDASALTGI---PLPLIK--SYL 112
Query: 504 IDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTV 563
+ L + H H + H DLKP N+L++ + + DFGLA+ F + ++ V
Sbjct: 113 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVV 168
Query: 564 SIGLKGSIGYIPPEHMNG--QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSI----H 617
++ Y PE + G S DI+S G + EM T + +F D I
Sbjct: 169 ------TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQLFR 218
Query: 618 MFVSMALPDHVMDILDPSMP 637
+F ++ PD V+ SMP
Sbjct: 219 IFRTLGTPDEVVWPGVTSMP 238
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 122/260 (46%), Gaps = 34/260 (13%)
Query: 387 STDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKL--QQQGALKSFIDECNALKSTR 443
S +NF K IG G++G VYK G +VA+K ++L + +G + I E + LK
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 444 HRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIA 503
H NI++++ + E + LVFEF+ + +L +++ S L +I+ +
Sbjct: 62 HPNIVKLLDVIHT---ENKLY--LVFEFL-HQDLKKFMDASALTGI---PLPLIK--SYL 110
Query: 504 IDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTV 563
+ L + H H + H DLKP N+L++ + + DFGLA+ F + ++ V
Sbjct: 111 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVV 166
Query: 564 SIGLKGSIGYIPPEHMNG--QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSI----H 617
++ Y PE + G S DI+S G + EM T + +F D I
Sbjct: 167 ------TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQLFR 216
Query: 618 MFVSMALPDHVMDILDPSMP 637
+F ++ PD V+ SMP
Sbjct: 217 IFRTLGTPDEVVWPGVTSMP 236
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 94/218 (43%), Gaps = 28/218 (12%)
Query: 397 IGTGSFGSVYKGTL----GDGTIVAIKVLK---LQQQGALKSFIDECNALKSTRHRNILR 449
+G GSFG V +G G VA+K LK L Q A+ FI E NA+ S HRN++R
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 450 VITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASA 509
+ + ++ +V E G+L L H+ LS A+ VA
Sbjct: 80 LYGVVLTPPMK------MVTELAPLGSLLDRLRKHQG-HFLLGTLS-----RYAVQVAEG 127
Query: 510 LDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKG 569
+ YL H DL N+LL +GDFGL + L + D+ + +
Sbjct: 128 MGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV---- 180
Query: 570 SIGYIPPEHMNGQV-SILGDIYSYGILLLEMFT-GKRP 605
+ PE + + S D + +G+ L EMFT G+ P
Sbjct: 181 PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 218
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 106/251 (42%), Gaps = 36/251 (14%)
Query: 389 DNFSKENLIGTGSFGSVYKGTLGDGT-IVAIKVL---KLQQQGALKSFIDECNALKSTRH 444
++F +G G FG+VY I+A+KVL +L++ G E RH
Sbjct: 11 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 70
Query: 445 RNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVI--QRLNI 502
NILR+ L+ E+ G + + + +KLS QR
Sbjct: 71 PNILRLYGYFHDATR-----VYLILEYAPLGTV----------YRELQKLSKFDEQRTAT 115
Query: 503 AI-DVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQ 561
I ++A+AL Y H + H D+KP N+LL + DFG + PS +
Sbjct: 116 YITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRR 166
Query: 562 TVSIGLKGSIGYIPPEHMNGQVSILG-DIYSYGILLLEMFTGKRP-TGDMFKDDFSIHMF 619
L G++ Y+PPE + G++ D++S G+L E GK P + +++ +
Sbjct: 167 A---ALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 223
Query: 620 VSMALPDHVMD 630
V PD V +
Sbjct: 224 VEFTFPDFVTE 234
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 122/260 (46%), Gaps = 34/260 (13%)
Query: 387 STDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKL--QQQGALKSFIDECNALKSTR 443
S +NF K IG G++G VYK G +VA+K ++L + +G + I E + LK
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 444 HRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIA 503
H NI++++ + E + LVFEF+ + +L +++ S L +I+ +
Sbjct: 62 HPNIVKLLDVIHT---ENKLY--LVFEFL-HQDLKKFMDASALTGI---PLPLIK--SYL 110
Query: 504 IDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTV 563
+ L + H H + H DLKP N+L++ + + DFGLA+ F + ++ V
Sbjct: 111 FQLLQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVV 166
Query: 564 SIGLKGSIGYIPPEHMNG--QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSI----H 617
++ Y PE + G S DI+S G + EM T + +F D I
Sbjct: 167 ------TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQLFR 216
Query: 618 MFVSMALPDHVMDILDPSMP 637
+F ++ PD V+ SMP
Sbjct: 217 IFRTLGTPDEVVWPGVTSMP 236
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 94/218 (43%), Gaps = 28/218 (12%)
Query: 397 IGTGSFGSVYKGTL----GDGTIVAIKVLK---LQQQGALKSFIDECNALKSTRHRNILR 449
+G GSFG V +G G VA+K LK L Q A+ FI E NA+ S HRN++R
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 450 VITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASA 509
+ + ++ +V E G+L L H+ LS A+ VA
Sbjct: 80 LYGVVLTPPMK------MVTELAPLGSLLDRLRKHQG-HFLLGTLS-----RYAVQVAEG 127
Query: 510 LDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKG 569
+ YL H DL N+LL +GDFGL + L + D+ + +
Sbjct: 128 MGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV---- 180
Query: 570 SIGYIPPEHMNGQV-SILGDIYSYGILLLEMFT-GKRP 605
+ PE + + S D + +G+ L EMFT G+ P
Sbjct: 181 PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 218
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 112/232 (48%), Gaps = 30/232 (12%)
Query: 383 DISKSTDNFSKENLIGTGSFGSVY----KGTLGDGTIVAIKVLKLQQQGALKS---FIDE 435
++++ S+E +G GSFG VY KG + D + + + + +++ F++E
Sbjct: 14 EVAREKITMSRE--LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 71
Query: 436 CNALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLH---PSPAEHYQFK 492
+ +K +++R++ S ++ E M+ G+L +L P +
Sbjct: 72 ASVMKEFNCHHVVRLLGVVSQ-----GQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 126
Query: 493 KLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFE 552
S+ + + +A ++A + YL+ + H DL N ++ +D T +GDFG+ + ++E
Sbjct: 127 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 183
Query: 553 ISDNPSKNQTVSIGLKG--SIGYIPPEHM-NGQVSILGDIYSYGILLLEMFT 601
+D K G KG + ++ PE + +G + D++S+G++L E+ T
Sbjct: 184 -TDYYRK------GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 94/218 (43%), Gaps = 28/218 (12%)
Query: 397 IGTGSFGSVYKGTL----GDGTIVAIKVLK---LQQQGALKSFIDECNALKSTRHRNILR 449
+G GSFG V +G G VA+K LK L Q A+ FI E NA+ S HRN++R
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 450 VITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASA 509
+ + ++ +V E G+L L H+ LS A+ VA
Sbjct: 86 LYGVVLTPPMK------MVTELAPLGSLLDRLRKHQG-HFLLGTLS-----RYAVQVAEG 133
Query: 510 LDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKG 569
+ YL H DL N+LL +GDFGL + L + D+ + +
Sbjct: 134 MGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV---- 186
Query: 570 SIGYIPPEHMNGQV-SILGDIYSYGILLLEMFT-GKRP 605
+ PE + + S D + +G+ L EMFT G+ P
Sbjct: 187 PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 224
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 106/251 (42%), Gaps = 36/251 (14%)
Query: 389 DNFSKENLIGTGSFGSVYKGTLGDGT-IVAIKVL---KLQQQGALKSFIDECNALKSTRH 444
++F +G G FG+VY I+A+KVL +L++ G E RH
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 445 RNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVI--QRLNI 502
NILR+ L+ E+ G + + + +KLS QR
Sbjct: 68 PNILRLYGYFHDATR-----VYLILEYAPLGTV----------YRELQKLSKFDEQRTAT 112
Query: 503 AI-DVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQ 561
I ++A+AL Y H + H D+KP N+LL + DFG + PS +
Sbjct: 113 YITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRR 163
Query: 562 TVSIGLKGSIGYIPPEHMNGQVSILG-DIYSYGILLLEMFTGKRP-TGDMFKDDFSIHMF 619
L G++ Y+PPE + G++ D++S G+L E GK P + +++ +
Sbjct: 164 A---ALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 220
Query: 620 VSMALPDHVMD 630
V PD V +
Sbjct: 221 VEFTFPDFVTE 231
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 114/232 (49%), Gaps = 30/232 (12%)
Query: 383 DISKSTDNFSKENLIGTGSFGSVY----KGTLGDGTIVAIKVLKLQQQGALKS---FIDE 435
++++ S+E +G GSFG VY KG + D + + + + +++ F++E
Sbjct: 43 EVAREKITMSRE--LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 100
Query: 436 CNALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLH---PSPAEHYQFK 492
+ +K +++R++ S +G ++ E M+ G+L +L P +
Sbjct: 101 ASVMKEFNCHHVVRLLGVVS----QGQP-TLVIMELMTRGDLKSYLRSLRPEMENNPVLA 155
Query: 493 KLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFE 552
S+ + + +A ++A + YL+ + H DL N ++ +D T +GDFG+ + ++E
Sbjct: 156 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 212
Query: 553 ISDNPSKNQTVSIGLKG--SIGYIPPEHM-NGQVSILGDIYSYGILLLEMFT 601
+D K G KG + ++ PE + +G + D++S+G++L E+ T
Sbjct: 213 -TDYYRK------GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 257
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 112/232 (48%), Gaps = 30/232 (12%)
Query: 383 DISKSTDNFSKENLIGTGSFGSVY----KGTLGDGTIVAIKVLKLQQQGALKS---FIDE 435
++++ S+E +G GSFG VY KG + D + + + + +++ F++E
Sbjct: 21 EVAREKITMSRE--LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 78
Query: 436 CNALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLH---PSPAEHYQFK 492
+ +K +++R++ S ++ E M+ G+L +L P +
Sbjct: 79 ASVMKEFNCHHVVRLLGVVSQ-----GQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 133
Query: 493 KLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFE 552
S+ + + +A ++A + YL+ + H DL N ++ +D T +GDFG+ + ++E
Sbjct: 134 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 190
Query: 553 ISDNPSKNQTVSIGLKG--SIGYIPPEHM-NGQVSILGDIYSYGILLLEMFT 601
+D K G KG + ++ PE + +G + D++S+G++L E+ T
Sbjct: 191 -TDYYRK------GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 122/260 (46%), Gaps = 34/260 (13%)
Query: 387 STDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKL--QQQGALKSFIDECNALKSTR 443
S +NF K IG G++G VYK G +VA+K ++L + +G + I E + LK
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 444 HRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIA 503
H NI++++ + E + LVFEF+ + +L +++ S L +I+ +
Sbjct: 64 HPNIVKLLDVIHT---ENKLY--LVFEFL-HQDLKKFMDASALTGI---PLPLIK--SYL 112
Query: 504 IDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTV 563
+ L + H H + H DLKP N+L++ + + DFGLA+ F + ++ V
Sbjct: 113 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVV 168
Query: 564 SIGLKGSIGYIPPEHMNG--QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSI----H 617
++ Y PE + G S DI+S G + EM T + +F D I
Sbjct: 169 ------TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQLFR 218
Query: 618 MFVSMALPDHVMDILDPSMP 637
+F ++ PD V+ SMP
Sbjct: 219 IFRTLGTPDEVVWPGVTSMP 238
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 121/260 (46%), Gaps = 34/260 (13%)
Query: 387 STDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKL--QQQGALKSFIDECNALKSTR 443
S +NF K IG G++G VYK G +VA+K ++L + +G + I E + LK
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 444 HRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIA 503
H NI++++ + E + LVFEF+S +L ++ S L +I+ +
Sbjct: 63 HPNIVKLLDVIHT---ENKLY--LVFEFLSM-DLKDFMDASALTGI---PLPLIK--SYL 111
Query: 504 IDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTV 563
+ L + H H + H DLKP N+L++ + + DFGLA+ F + ++ V
Sbjct: 112 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVV 167
Query: 564 SIGLKGSIGYIPPEHMNG--QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSI----H 617
++ Y PE + G S DI+S G + EM T + +F D I
Sbjct: 168 ------TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQLFR 217
Query: 618 MFVSMALPDHVMDILDPSMP 637
+F ++ PD V+ SMP
Sbjct: 218 IFRTLGTPDEVVWPGVTSMP 237
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 122/260 (46%), Gaps = 34/260 (13%)
Query: 387 STDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKL--QQQGALKSFIDECNALKSTR 443
S +NF K IG G++G VYK G +VA+K ++L + +G + I E + LK
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 444 HRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIA 503
H NI++++ + E + LVFEF+ + +L +++ S L +I+ +
Sbjct: 63 HPNIVKLLDVIHT---ENKLY--LVFEFL-HQDLKKFMDASALTGI---PLPLIK--SYL 111
Query: 504 IDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTV 563
+ L + H H + H DLKP N+L++ + + DFGLA+ F + ++ V
Sbjct: 112 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVV 167
Query: 564 SIGLKGSIGYIPPEHMNG--QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSI----H 617
++ Y PE + G S DI+S G + EM T + +F D I
Sbjct: 168 ------TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQLFR 217
Query: 618 MFVSMALPDHVMDILDPSMP 637
+F ++ PD V+ SMP
Sbjct: 218 IFRTLGTPDEVVWPGVTSMP 237
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 113/244 (46%), Gaps = 47/244 (19%)
Query: 390 NFSKENL-----IGTGSFGSVYKGTL------GDGTIVAIKVLKLQ----QQGALKSFID 434
F +ENL +G+G+FG V T G VA+K+LK + ++ AL S +
Sbjct: 41 EFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELK 100
Query: 435 ECNALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPS-------PAE 487
L S H NI+ ++ AC+ L G + L+FE+ G+L +L E
Sbjct: 101 MMTQLGS--HENIVNLLGACT---LSGPIY--LIFEYCCYGDLLNYLRSKREKFSEDEIE 153
Query: 488 HYQFKKLSVIQRLNI---------AIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMT 538
+ K+L + LN+ A VA +++L H DL NVL+
Sbjct: 154 YENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEF---KSCVHRDLAARNVLVTHGKV 210
Query: 539 AHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHM-NGQVSILGDIYSYGILLL 597
+ DFGLA+ + +SD+ N V + + ++ PE + G +I D++SYGILL
Sbjct: 211 VKICDFGLARDI--MSDS---NYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLW 265
Query: 598 EMFT 601
E+F+
Sbjct: 266 EIFS 269
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 122/260 (46%), Gaps = 34/260 (13%)
Query: 387 STDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKL--QQQGALKSFIDECNALKSTR 443
S +NF K IG G++G VYK G +VA+K ++L + +G + I E + LK
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 444 HRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIA 503
H NI++++ + E + LVFEF+ + +L +++ S L +I+ +
Sbjct: 62 HPNIVKLLDVIHT---ENKLY--LVFEFL-HQDLKKFMDASALTGI---PLPLIK--SYL 110
Query: 504 IDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTV 563
+ L + H H + H DLKP N+L++ + + DFGLA+ F + ++ V
Sbjct: 111 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVV 166
Query: 564 SIGLKGSIGYIPPEHMNG--QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSI----H 617
++ Y PE + G S DI+S G + EM T + +F D I
Sbjct: 167 ------TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR----ALFPGDSEIDQLFR 216
Query: 618 MFVSMALPDHVMDILDPSMP 637
+F ++ PD V+ SMP
Sbjct: 217 IFRTLGTPDEVVWPGVTSMP 236
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 122/260 (46%), Gaps = 34/260 (13%)
Query: 387 STDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKL--QQQGALKSFIDECNALKSTR 443
S +NF K IG G++G VYK G +VA+K ++L + +G + I E + LK
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 444 HRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIA 503
H NI++++ + E + LVFEF+ + +L +++ S L +I+ +
Sbjct: 61 HPNIVKLLDVIHT---ENKLY--LVFEFL-HQDLKKFMDASALTGI---PLPLIK--SYL 109
Query: 504 IDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTV 563
+ L + H H + H DLKP N+L++ + + DFGLA+ F + ++ V
Sbjct: 110 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVV 165
Query: 564 SIGLKGSIGYIPPEHMNG--QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSI----H 617
++ Y PE + G S DI+S G + EM T + +F D I
Sbjct: 166 ------TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQLFR 215
Query: 618 MFVSMALPDHVMDILDPSMP 637
+F ++ PD V+ SMP
Sbjct: 216 IFRTLGTPDEVVWPGVTSMP 235
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 108/251 (43%), Gaps = 36/251 (14%)
Query: 389 DNFSKENLIGTGSFGSVYKGTLGDGT-IVAIKVL---KLQQQGALKSFIDECNALKSTRH 444
++F +G G FG+VY I+A+KVL +L++ G E RH
Sbjct: 11 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 70
Query: 445 RNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVI--QRLNI 502
NILR+ L+ E+ G + + + +KLS QR
Sbjct: 71 PNILRLYGYFHDATR-----VYLILEYAPLGTV----------YRELQKLSKFDEQRTAT 115
Query: 503 AI-DVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQ 561
I ++A+AL Y H + H D+KP N+LL G+ +A F + + S+
Sbjct: 116 YITELANALSYCH---SKRVIHRDIKPENLLL-----GSAGELKIANFGWSVHAPSSRRT 167
Query: 562 TVSIGLKGSIGYIPPEHMNGQVSILG-DIYSYGILLLEMFTGKRP-TGDMFKDDFSIHMF 619
T L G++ Y+PPE + G++ D++S G+L E GK P + +++ +
Sbjct: 168 T----LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 223
Query: 620 VSMALPDHVMD 630
V PD V +
Sbjct: 224 VEFTFPDFVTE 234
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 122/260 (46%), Gaps = 34/260 (13%)
Query: 387 STDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKL--QQQGALKSFIDECNALKSTR 443
S +NF K IG G++G VYK G +VA+K ++L + +G + I E + LK
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 444 HRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIA 503
H NI++++ + E + LVFEF+ + +L +++ S L +I+ +
Sbjct: 63 HPNIVKLLDVIHT---ENKLY--LVFEFL-HQDLKKFMDASALTGI---PLPLIK--SYL 111
Query: 504 IDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTV 563
+ L + H H + H DLKP N+L++ + + DFGLA+ F + ++ V
Sbjct: 112 FQLLQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVV 167
Query: 564 SIGLKGSIGYIPPEHMNG--QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSI----H 617
++ Y PE + G S DI+S G + EM T + +F D I
Sbjct: 168 ------TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQLFR 217
Query: 618 MFVSMALPDHVMDILDPSMP 637
+F ++ PD V+ SMP
Sbjct: 218 IFRTLGTPDEVVWPGVTSMP 237
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 122/260 (46%), Gaps = 34/260 (13%)
Query: 387 STDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKL--QQQGALKSFIDECNALKSTR 443
S +NF K IG G++G VYK G +VA+K ++L + +G + I E + LK
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 444 HRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIA 503
H NI++++ + E + LVFEF+ + +L +++ S L +I+ +
Sbjct: 63 HPNIVKLLDVIHT---ENKLY--LVFEFL-HQDLKKFMDASALTGI---PLPLIK--SYL 111
Query: 504 IDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTV 563
+ L + H H + H DLKP N+L++ + + DFGLA+ F + ++ V
Sbjct: 112 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVV 167
Query: 564 SIGLKGSIGYIPPEHMNG--QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSI----H 617
++ Y PE + G S DI+S G + EM T + +F D I
Sbjct: 168 ------TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR----ALFPGDSEIDQLFR 217
Query: 618 MFVSMALPDHVMDILDPSMP 637
+F ++ PD V+ SMP
Sbjct: 218 IFRTLGTPDEVVWPGVTSMP 237
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 112/232 (48%), Gaps = 30/232 (12%)
Query: 383 DISKSTDNFSKENLIGTGSFGSVY----KGTLGDGTIVAIKVLKLQQQGALKS---FIDE 435
++++ S+E +G GSFG VY KG + D + + + + +++ F++E
Sbjct: 12 EVAREKITMSRE--LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 69
Query: 436 CNALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLH---PSPAEHYQFK 492
+ +K +++R++ S ++ E M+ G+L +L P +
Sbjct: 70 ASVMKEFNCHHVVRLLGVVSQ-----GQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 124
Query: 493 KLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFE 552
S+ + + +A ++A + YL+ + H DL N ++ +D T +GDFG+ + ++E
Sbjct: 125 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 181
Query: 553 ISDNPSKNQTVSIGLKG--SIGYIPPEHM-NGQVSILGDIYSYGILLLEMFT 601
+D K G KG + ++ PE + +G + D++S+G++L E+ T
Sbjct: 182 -TDYYRK------GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 226
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 94/218 (43%), Gaps = 28/218 (12%)
Query: 397 IGTGSFGSVYKGTL----GDGTIVAIKVLK---LQQQGALKSFIDECNALKSTRHRNILR 449
+G GSFG V +G G VA+K LK L Q A+ FI E NA+ S HRN++R
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 450 VITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASA 509
+ + ++ +V E G+L L H+ LS A+ VA
Sbjct: 76 LYGVVLTPPMK------MVTELAPLGSLLDRLRKHQG-HFLLGTLS-----RYAVQVAEG 123
Query: 510 LDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKG 569
+ YL H DL N+LL +GDFGL + L + D+ + +
Sbjct: 124 MGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV---- 176
Query: 570 SIGYIPPEHMNGQV-SILGDIYSYGILLLEMFT-GKRP 605
+ PE + + S D + +G+ L EMFT G+ P
Sbjct: 177 PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 122/260 (46%), Gaps = 34/260 (13%)
Query: 387 STDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKL--QQQGALKSFIDECNALKSTR 443
S +NF K IG G++G VYK G +VA+K ++L + +G + I E + LK
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 444 HRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIA 503
H NI++++ + E + LVFEF+ + +L +++ S L +I+ +
Sbjct: 61 HPNIVKLLDVIHT---ENKLY--LVFEFL-HQDLKKFMDASALTGI---PLPLIK--SYL 109
Query: 504 IDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTV 563
+ L + H H + H DLKP N+L++ + + DFGLA+ F + ++ V
Sbjct: 110 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVV 165
Query: 564 SIGLKGSIGYIPPEHMNG--QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSI----H 617
++ Y PE + G S DI+S G + EM T + +F D I
Sbjct: 166 ------TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQLFR 215
Query: 618 MFVSMALPDHVMDILDPSMP 637
+F ++ PD V+ SMP
Sbjct: 216 IFRTLGTPDEVVWPGVTSMP 235
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 108/251 (43%), Gaps = 36/251 (14%)
Query: 389 DNFSKENLIGTGSFGSVYKGTLGDGT-IVAIKVL---KLQQQGALKSFIDECNALKSTRH 444
++F +G G FG+VY I+A+KVL +L++ G E RH
Sbjct: 9 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 68
Query: 445 RNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVI--QRLNI 502
NILR+ L+ E+ G + + + +KLS QR
Sbjct: 69 PNILRLYGYFHDATR-----VYLILEYAPLGTV----------YRELQKLSKFDEQRTAT 113
Query: 503 AI-DVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQ 561
I ++A+AL Y H + H D+KP N+LL G+ +A F + + S+
Sbjct: 114 YITELANALSYCH---SKRVIHRDIKPENLLL-----GSAGELKIADFGWSVHAPSSRRD 165
Query: 562 TVSIGLKGSIGYIPPEHMNGQVSILG-DIYSYGILLLEMFTGKRP-TGDMFKDDFSIHMF 619
T L G++ Y+PPE + G++ D++S G+L E GK P + +++ +
Sbjct: 166 T----LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 221
Query: 620 VSMALPDHVMD 630
V PD V +
Sbjct: 222 VEFTFPDFVTE 232
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 122/260 (46%), Gaps = 34/260 (13%)
Query: 387 STDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKL--QQQGALKSFIDECNALKSTR 443
S +NF K IG G++G VYK G +VA+K ++L + +G + I E + LK
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 444 HRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIA 503
H NI++++ + E + LVFEF+ + +L +++ S L +I+ +
Sbjct: 61 HPNIVKLLDVIHT---ENKLY--LVFEFL-HQDLKKFMDASALTGI---PLPLIK--SYL 109
Query: 504 IDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTV 563
+ L + H H + H DLKP N+L++ + + DFGLA+ F + ++ V
Sbjct: 110 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVV 165
Query: 564 SIGLKGSIGYIPPEHMNG--QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSI----H 617
++ Y PE + G S DI+S G + EM T + +F D I
Sbjct: 166 ------TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQLFR 215
Query: 618 MFVSMALPDHVMDILDPSMP 637
+F ++ PD V+ SMP
Sbjct: 216 IFRTLGTPDEVVWPGVTSMP 235
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 112/232 (48%), Gaps = 30/232 (12%)
Query: 383 DISKSTDNFSKENLIGTGSFGSVY----KGTLGDGTIVAIKVLKLQQQGALKS---FIDE 435
++++ S+E +G GSFG VY KG + D + + + + +++ F++E
Sbjct: 15 EVAREKITMSRE--LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 72
Query: 436 CNALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLH---PSPAEHYQFK 492
+ +K +++R++ S ++ E M+ G+L +L P +
Sbjct: 73 ASVMKEFNCHHVVRLLGVVSQ-----GQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 127
Query: 493 KLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFE 552
S+ + + +A ++A + YL+ + H DL N ++ +D T +GDFG+ + ++E
Sbjct: 128 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 184
Query: 553 ISDNPSKNQTVSIGLKG--SIGYIPPEHM-NGQVSILGDIYSYGILLLEMFT 601
+D K G KG + ++ PE + +G + D++S+G++L E+ T
Sbjct: 185 -TDYYRK------GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 94/218 (43%), Gaps = 28/218 (12%)
Query: 397 IGTGSFGSVYKGTL----GDGTIVAIKVLK---LQQQGALKSFIDECNALKSTRHRNILR 449
+G GSFG V +G G VA+K LK L Q A+ FI E NA+ S HRN++R
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 450 VITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASA 509
+ + ++ +V E G+L L H+ LS A+ VA
Sbjct: 76 LYGVVLTPPMK------MVTELAPLGSLLDRLRKHQG-HFLLGTLS-----RYAVQVAEG 123
Query: 510 LDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKG 569
+ YL H DL N+LL +GDFGL + L + D+ + +
Sbjct: 124 MGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV---- 176
Query: 570 SIGYIPPEHMNGQV-SILGDIYSYGILLLEMFT-GKRP 605
+ PE + + S D + +G+ L EMFT G+ P
Sbjct: 177 PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 102/217 (47%), Gaps = 26/217 (11%)
Query: 397 IGTGSFGSVYKGTLG------DGTIVAIKVLK--LQQQGALKSFIDECNALKSTRHRNIL 448
+G G+FG VY+G + VA+K L +Q L F+ E + H+NI+
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDEL-DFLMEALIISKFNHQNIV 114
Query: 449 RVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVAS 508
R C V L+ + ++ E M+ G+L +L + Q L+++ L++A D+A
Sbjct: 115 R----CIGVSLQSLP-RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIAC 169
Query: 509 ALDYLHHHCDTPIAHCDLKPSNVLLD---KDMTAHVGDFGLAKFLFEISDNPSKNQTVSI 565
YL + H D+ N LL A +GDFG+A+ ++ + K +
Sbjct: 170 GCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR-AGYYRKGGCAML 225
Query: 566 GLKGSIGYIPPE-HMNGQVSILGDIYSYGILLLEMFT 601
+K ++PPE M G + D +S+G+LL E+F+
Sbjct: 226 PVK----WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 258
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 122/260 (46%), Gaps = 34/260 (13%)
Query: 387 STDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKL--QQQGALKSFIDECNALKSTR 443
S +NF K IG G++G VYK G +VA+K ++L + +G + I E + LK
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 444 HRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIA 503
H NI++++ + E + LVFEF+ + +L +++ S L +I+ +
Sbjct: 61 HPNIVKLLDVIHT---ENKLY--LVFEFL-HQDLKKFMDASALTGI---PLPLIK--SYL 109
Query: 504 IDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTV 563
+ L + H H + H DLKP N+L++ + + DFGLA+ F + ++ V
Sbjct: 110 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVV 165
Query: 564 SIGLKGSIGYIPPEHMNG--QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSI----H 617
++ Y PE + G S DI+S G + EM T + +F D I
Sbjct: 166 ------TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQLFR 215
Query: 618 MFVSMALPDHVMDILDPSMP 637
+F ++ PD V+ SMP
Sbjct: 216 IFRTLGTPDEVVWPGVTSMP 235
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 111/232 (47%), Gaps = 30/232 (12%)
Query: 383 DISKSTDNFSKENLIGTGSFGSVY----KGTLGDGTIVAIKVLKLQQQGALKS---FIDE 435
++++ S+E +G GSFG VY KG + D + + + + +++ F++E
Sbjct: 6 EVAREKITMSRE--LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 63
Query: 436 CNALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLH---PSPAEHYQFK 492
+ +K +++R++ S ++ E M+ G+L +L P +
Sbjct: 64 ASVMKEFNCHHVVRLLGVVSQ-----GQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 118
Query: 493 KLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFE 552
S+ + + +A ++A + YL+ + H DL N ++ +D T +GDFG+ + + E
Sbjct: 119 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXE 175
Query: 553 ISDNPSKNQTVSIGLKG--SIGYIPPEHM-NGQVSILGDIYSYGILLLEMFT 601
+D K G KG + ++ PE + +G + D++S+G++L E+ T
Sbjct: 176 -TDXXRK------GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 220
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 101/217 (46%), Gaps = 26/217 (11%)
Query: 397 IGTGSFGSVYKGTLG------DGTIVAIKVLK--LQQQGALKSFIDECNALKSTRHRNIL 448
+G G+FG VY+G + VA+K L +Q L F+ E + H+NI+
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDEL-DFLMEALIISKFNHQNIV 137
Query: 449 RVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVAS 508
R C V L+ + ++ E M+ G+L +L + Q L+++ L++A D+A
Sbjct: 138 R----CIGVSLQSLP-RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIAC 192
Query: 509 ALDYLHHHCDTPIAHCDLKPSNVLLD---KDMTAHVGDFGLAKFLFEISDNPSKNQTVSI 565
YL + H D+ N LL A +GDFG+A+ ++ K +
Sbjct: 193 GCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYY-RKGGCAML 248
Query: 566 GLKGSIGYIPPE-HMNGQVSILGDIYSYGILLLEMFT 601
+K ++PPE M G + D +S+G+LL E+F+
Sbjct: 249 PVK----WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 281
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 101/223 (45%), Gaps = 42/223 (18%)
Query: 397 IGTGSFGSVYKGTLGDGTIVAIKVLKLQQQGALKSFIDECNALKST--RHRNILRVITAC 454
IG G +G V+ G G VA+KV ++ S+ E ++ RH NIL I A
Sbjct: 45 IGKGRYGEVWMGKW-RGEKVAVKVFFTTEEA---SWFRETEIYQTVLMRHENILGFIAA- 99
Query: 455 SSVDLEGNDFKA---LVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALD 511
D++G L+ ++ NG+L +L + L L +A S L
Sbjct: 100 ---DIKGTGSWTQLYLITDYHENGSLYDYLKST--------TLDAKSMLKLAYSSVSGLC 148
Query: 512 YLHHHC-----DTPIAHCDLKPSNVLLDKDMTAHVGDFGLA-KFLFEIS--DNPSKNQTV 563
+LH IAH DLK N+L+ K+ T + D GLA KF+ + + D P +
Sbjct: 149 HLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRV- 207
Query: 564 SIGLKGSIGYIPPEHMNG-------QVSILGDIYSYGILLLEM 599
G+ Y+PPE ++ Q I+ D+YS+G++L E+
Sbjct: 208 -----GTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEV 245
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 109/240 (45%), Gaps = 32/240 (13%)
Query: 378 GMSYSDISKSTDNFSKENLIGTGSFGSVYKGTLGD-GTIVAIKVLKLQQQGALKSFIDEC 436
G S S +++ + + +GTG FG V + D G VAIK + +Q+ + K+ C
Sbjct: 3 GRSPSLPTQTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIK--QCRQELSPKNRERWC 60
Query: 437 NALKSTRHRNILRVITACSSVD----LEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFK 492
++ + N V++A D L ND L E+ G+L ++L+ QF+
Sbjct: 61 LEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLN-------QFE 113
Query: 493 KLSVIQRLNIAI---DVASALDYLHHHCDTPIAHCDLKPSNVLLD---KDMTAHVGDFGL 546
++ I D++SAL YLH + I H DLKP N++L + + + D G
Sbjct: 114 NCCGLKEGPIRTLLSDISSALRYLH---ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGY 170
Query: 547 AKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHM-NGQVSILGDIYSYGILLLEMFTGKRP 605
AK L + G++ Y+ PE + + ++ D +S+G L E TG RP
Sbjct: 171 AKEL--------DQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRP 222
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 109/240 (45%), Gaps = 32/240 (13%)
Query: 378 GMSYSDISKSTDNFSKENLIGTGSFGSVYKGTLGD-GTIVAIKVLKLQQQGALKSFIDEC 436
G S S +++ + + +GTG FG V + D G VAIK + +Q+ + K+ C
Sbjct: 4 GRSPSLPTQTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIK--QCRQELSPKNRERWC 61
Query: 437 NALKSTRHRNILRVITACSSVD----LEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFK 492
++ + N V++A D L ND L E+ G+L ++L+ QF+
Sbjct: 62 LEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLN-------QFE 114
Query: 493 KLSVIQRLNIAI---DVASALDYLHHHCDTPIAHCDLKPSNVLLD---KDMTAHVGDFGL 546
++ I D++SAL YLH + I H DLKP N++L + + + D G
Sbjct: 115 NCCGLKEGPIRTLLSDISSALRYLH---ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGY 171
Query: 547 AKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHM-NGQVSILGDIYSYGILLLEMFTGKRP 605
AK L + G++ Y+ PE + + ++ D +S+G L E TG RP
Sbjct: 172 AKEL--------DQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRP 223
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 100/226 (44%), Gaps = 32/226 (14%)
Query: 388 TDNFSKENLIGTGSFGSVY----KGTLGDGTIVAIKVLKLQQQGALKSFIDECNALKSTR 443
+D + + ++G GSFG V K T + + I +++Q+ +S + E LK
Sbjct: 31 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 90
Query: 444 HRNILRVITACSSVDLEGNDFKALVFEFMSNGNL-DQWLHPSPAEHYQFKKLSVIQRLNI 502
H NI+++ E + LV E + G L D+ + K+ S + I
Sbjct: 91 HPNIMKLYEF-----FEDKGYFYLVGEVYTGGELFDEIISR--------KRFSEVDAARI 137
Query: 503 AIDVASALDYLHHHCDTPIAHCDLKPSNVLLD---KDMTAHVGDFGLAKFLFEISDNPSK 559
V S + Y+H + I H DLKP N+LL+ KD + DFGL+ SK
Sbjct: 138 IRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF-----EASK 189
Query: 560 NQTVSIGLKGSIGYIPPEHMNGQVSILGDIYSYGILLLEMFTGKRP 605
IG + YI PE ++G D++S G++L + +G P
Sbjct: 190 KMKDKIG---TAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPP 232
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 121/260 (46%), Gaps = 34/260 (13%)
Query: 387 STDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKL--QQQGALKSFIDECNALKSTR 443
S +NF K IG G++G VYK G +VA+K ++L + +G + I E + LK
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 444 HRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIA 503
H NI++++ + E + LVFEF+ + +L ++ S L +I+ +
Sbjct: 64 HPNIVKLLDVIHT---ENKLY--LVFEFL-HQDLKTFMDASALTGI---PLPLIK--SYL 112
Query: 504 IDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTV 563
+ L + H H + H DLKP N+L++ + + DFGLA+ F + ++ V
Sbjct: 113 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVV 168
Query: 564 SIGLKGSIGYIPPEHMNG--QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSI----H 617
++ Y PE + G S DI+S G + EM T + +F D I
Sbjct: 169 ------TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQLFR 218
Query: 618 MFVSMALPDHVMDILDPSMP 637
+F ++ PD V+ SMP
Sbjct: 219 IFRTLGTPDEVVWPGVTSMP 238
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 106/235 (45%), Gaps = 46/235 (19%)
Query: 387 STDNFSKENLIGTGSFGSVY-KGTLGDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHR 445
S +F +GTGSFG V+ + +G A+KVLK + LK ++ N R
Sbjct: 4 SLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQ-VEHTND-----ER 57
Query: 446 NILRVITACSSVDLEGNDFKA----LVFEFMSNGNLDQWLH-----PSPAEHYQFKKLSV 496
+L ++T + + G A ++ +++ G L L P+P +
Sbjct: 58 LMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKF------- 110
Query: 497 IQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDN 556
A +V AL+YLH I + DLKP N+LLDK+ + DFG AK++
Sbjct: 111 -----YAAEVCLALEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYV------ 156
Query: 557 PSKNQTVSIGLKGSIGYIPPEHMNGQ---VSILGDIYSYGILLLEMFTGKRPTGD 608
V+ L G+ YI PE ++ + SI D +S+GIL+ EM G P D
Sbjct: 157 ----PDVTYXLCGTPDYIAPEVVSTKPYNKSI--DWWSFGILIYEMLAGYTPFYD 205
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 103/227 (45%), Gaps = 34/227 (14%)
Query: 388 TDNFSKENLIGTGSFGSVY--KGTLGDGTIVAIKVL---KLQQQGALKSFIDECNALKST 442
+D + + ++G GSFG V K + G A+KV+ +++Q+ +S + E LK
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQL 83
Query: 443 RHRNILRVITACSSVDLEGNDFKALVFEFMSNGNL-DQWLHPSPAEHYQFKKLSVIQRLN 501
H NI+++ E + LV E + G L D+ + K+ S +
Sbjct: 84 DHPNIMKLYEF-----FEDKGYFYLVGEVYTGGELFDEIISR--------KRFSEVDAAR 130
Query: 502 IAIDVASALDYLHHHCDTPIAHCDLKPSNVLLD---KDMTAHVGDFGLAKFLFEISDNPS 558
I V S + Y+H + I H DLKP N+LL+ KD + DFGL+ S
Sbjct: 131 IIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF-----EAS 182
Query: 559 KNQTVSIGLKGSIGYIPPEHMNGQVSILGDIYSYGILLLEMFTGKRP 605
K IG + YI PE ++G D++S G++L + +G P
Sbjct: 183 KKMKDKIG---TAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPP 226
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 106/251 (42%), Gaps = 36/251 (14%)
Query: 389 DNFSKENLIGTGSFGSVYKGTLGDGT-IVAIKVL---KLQQQGALKSFIDECNALKSTRH 444
++F +G G FG+VY I+A+KVL +L++ G E RH
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 445 RNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVI--QRLNI 502
NILR+ L+ E+ G + + + +KLS QR
Sbjct: 68 PNILRLYGYFHDATR-----VYLILEYAPLGTV----------YRELQKLSKFDEQRTAT 112
Query: 503 AI-DVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQ 561
I ++A+AL Y H + H D+KP N+LL + DFG + PS +
Sbjct: 113 YITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRR 163
Query: 562 TVSIGLKGSIGYIPPEHMNGQVSILG-DIYSYGILLLEMFTGKRP-TGDMFKDDFSIHMF 619
L G++ Y+PPE + G++ D++S G+L E GK P + +++ +
Sbjct: 164 XX---LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 220
Query: 620 VSMALPDHVMD 630
V PD V +
Sbjct: 221 VEFTFPDFVTE 231
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 105/230 (45%), Gaps = 29/230 (12%)
Query: 385 SKSTDNFSKENLIGTGSFGSVYKGT-LGDGTIVAIKVLKLQQQGALK-----SFIDEC-- 436
S +T + IG G++G+VYK G VA+K +++ G S + E
Sbjct: 5 SMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVAL 64
Query: 437 -NALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLS 495
L++ H N++R++ C++ + LVFE + + +L +L +P + +
Sbjct: 65 LRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIK 123
Query: 496 VIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAK-FLFEIS 554
+ R LD+LH +C I H DLKP N+L+ T + DFGLA+ + ++++
Sbjct: 124 DLMR-----QFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA 175
Query: 555 DNPSKNQTVSIGLKGSIGYIPPEH-MNGQVSILGDIYSYGILLLEMFTGK 603
P + ++ Y PE + + D++S G + EMF K
Sbjct: 176 LTP---------VVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 216
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 121/258 (46%), Gaps = 34/258 (13%)
Query: 389 DNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKL--QQQGALKSFIDECNALKSTRHR 445
+NF K IG G++G VYK G +VA+K ++L + +G + I E + LK H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 446 NILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAID 505
NI++++ + E + LVFEF+ + +L +++ S L +I+ +
Sbjct: 63 NIVKLLDVIHT---ENKLY--LVFEFL-HQDLKKFMDASALTGI---PLPLIK--SYLFQ 111
Query: 506 VASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSI 565
+ L + H H + H DLKP N+L++ + + DFGLA+ F + ++ V
Sbjct: 112 LLQGLSFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVV-- 165
Query: 566 GLKGSIGYIPPEHMNG--QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSI----HMF 619
++ Y PE + G S DI+S G + EM T + +F D I +F
Sbjct: 166 ----TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQLFRIF 217
Query: 620 VSMALPDHVMDILDPSMP 637
++ PD V+ SMP
Sbjct: 218 RTLGTPDEVVWPGVTSMP 235
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 104/251 (41%), Gaps = 36/251 (14%)
Query: 389 DNFSKENLIGTGSFGSVYKGTLGDGT-IVAIKVL---KLQQQGALKSFIDECNALKSTRH 444
++F +G G FG+VY I+A+KVL +L++ G E RH
Sbjct: 34 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 93
Query: 445 RNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAI 504
NILR+ L+ E+ G + + + +KLS A
Sbjct: 94 PNILRLYGYFHDATR-----VYLILEYAPLGTV----------YRELQKLSKFDEQRTAT 138
Query: 505 ---DVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQ 561
++A+AL Y H + H D+KP N+LL + DFG + PS +
Sbjct: 139 YITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRR 189
Query: 562 TVSIGLKGSIGYIPPEHMNGQVSILG-DIYSYGILLLEMFTGKRP-TGDMFKDDFSIHMF 619
L G++ Y+PPE + G++ D++S G+L E GK P + +++ +
Sbjct: 190 D---DLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 246
Query: 620 VSMALPDHVMD 630
V PD V +
Sbjct: 247 VEFTFPDFVTE 257
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 104/251 (41%), Gaps = 36/251 (14%)
Query: 389 DNFSKENLIGTGSFGSVYKGTLGDGT-IVAIKVL---KLQQQGALKSFIDECNALKSTRH 444
++F +G G FG+VY I+A+KVL +L++ G E RH
Sbjct: 10 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 69
Query: 445 RNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAI 504
NILR+ L+ E+ G + + + +KLS A
Sbjct: 70 PNILRLYGYFHDATR-----VYLILEYAPLGTV----------YRELQKLSKFDEQRTAT 114
Query: 505 ---DVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQ 561
++A+AL Y H + H D+KP N+LL + DFG + PS +
Sbjct: 115 YITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRR 165
Query: 562 TVSIGLKGSIGYIPPEHMNGQVSILG-DIYSYGILLLEMFTGKRP-TGDMFKDDFSIHMF 619
L G++ Y+PPE + G++ D++S G+L E GK P + +++ +
Sbjct: 166 XX---LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 222
Query: 620 VSMALPDHVMD 630
V PD V +
Sbjct: 223 VEFTFPDFVTE 233
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 106/251 (42%), Gaps = 36/251 (14%)
Query: 389 DNFSKENLIGTGSFGSVYKGTLGDGT-IVAIKVL---KLQQQGALKSFIDECNALKSTRH 444
++F +G G FG+VY I+A+KVL +L++ G E RH
Sbjct: 11 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 70
Query: 445 RNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVI--QRLNI 502
NILR+ L+ E+ G + + + +KLS QR
Sbjct: 71 PNILRLYGYFHDATR-----VYLILEYAPLGTV----------YRELQKLSKFDEQRTAT 115
Query: 503 AI-DVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQ 561
I ++A+AL Y H + H D+KP N+LL + DFG + PS +
Sbjct: 116 YITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRR 166
Query: 562 TVSIGLKGSIGYIPPEHMNGQVSILG-DIYSYGILLLEMFTGKRP-TGDMFKDDFSIHMF 619
L G++ Y+PPE + G++ D++S G+L E GK P + +++ +
Sbjct: 167 XX---LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 223
Query: 620 VSMALPDHVMD 630
V PD V +
Sbjct: 224 VEFTFPDFVTE 234
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 104/229 (45%), Gaps = 30/229 (13%)
Query: 390 NFSKENLIGTGSFGSVYKGT-LGDGTIVAIKVLKL-QQQGALKSFIDECNALKSTRHRNI 447
+F +G G FG V++ D AIK ++L ++ A + + E AL H I
Sbjct: 6 DFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGI 65
Query: 448 LRVITAC----SSVDLEGNDFKALVF---EFMSNGNLDQWLHPSPAEHYQFKKLSVIQRL 500
+R A ++ L+ + K ++ + NL W++ + ++ SV L
Sbjct: 66 VRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCT--IEERERSVC--L 121
Query: 501 NIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKN 560
+I + +A A+++LH + H DLKPSN+ D VGDFGL + D +
Sbjct: 122 HIFLQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAM----DQDEEE 174
Query: 561 QTV---------SIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEM 599
QTV G G+ Y+ PE ++G S DI+S G++L E+
Sbjct: 175 QTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFEL 223
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 103/227 (45%), Gaps = 34/227 (14%)
Query: 388 TDNFSKENLIGTGSFGSVY--KGTLGDGTIVAIKVL---KLQQQGALKSFIDECNALKST 442
+D + + ++G GSFG V K + G A+KV+ +++Q+ +S + E LK
Sbjct: 49 SDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQL 107
Query: 443 RHRNILRVITACSSVDLEGNDFKALVFEFMSNGNL-DQWLHPSPAEHYQFKKLSVIQRLN 501
H NI+++ E + LV E + G L D+ + K+ S +
Sbjct: 108 DHPNIMKLYEF-----FEDKGYFYLVGEVYTGGELFDEIISR--------KRFSEVDAAR 154
Query: 502 IAIDVASALDYLHHHCDTPIAHCDLKPSNVLLD---KDMTAHVGDFGLAKFLFEISDNPS 558
I V S + Y+H + I H DLKP N+LL+ KD + DFGL+ S
Sbjct: 155 IIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF-----EAS 206
Query: 559 KNQTVSIGLKGSIGYIPPEHMNGQVSILGDIYSYGILLLEMFTGKRP 605
K IG + YI PE ++G D++S G++L + +G P
Sbjct: 207 KKMKDKIG---TAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPP 250
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 111/232 (47%), Gaps = 30/232 (12%)
Query: 383 DISKSTDNFSKENLIGTGSFGSVY----KGTLGDGTIVAIKVLKLQQQGALKS---FIDE 435
++++ S+E +G GSFG VY KG + D + + + + +++ F++E
Sbjct: 8 EVAREKITMSRE--LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 65
Query: 436 CNALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLH---PSPAEHYQFK 492
+ +K +++R++ S ++ E M+ G+L +L P +
Sbjct: 66 ASVMKEFNCHHVVRLLGVVSQ-----GQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 120
Query: 493 KLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFE 552
S+ + + +A ++A + YL+ + H DL N + +D T +GDFG+ + ++E
Sbjct: 121 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYE 177
Query: 553 ISDNPSKNQTVSIGLKG--SIGYIPPEHM-NGQVSILGDIYSYGILLLEMFT 601
+D K G KG + ++ PE + +G + D++S+G++L E+ T
Sbjct: 178 -TDYYRK------GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 100/226 (44%), Gaps = 32/226 (14%)
Query: 388 TDNFSKENLIGTGSFGSVY----KGTLGDGTIVAIKVLKLQQQGALKSFIDECNALKSTR 443
+D + + ++G GSFG V K T + + I +++Q+ +S + E LK
Sbjct: 48 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 107
Query: 444 HRNILRVITACSSVDLEGNDFKALVFEFMSNGNL-DQWLHPSPAEHYQFKKLSVIQRLNI 502
H NI+++ E + LV E + G L D+ + K+ S + I
Sbjct: 108 HPNIMKLYEF-----FEDKGYFYLVGEVYTGGELFDEIISR--------KRFSEVDAARI 154
Query: 503 AIDVASALDYLHHHCDTPIAHCDLKPSNVLLD---KDMTAHVGDFGLAKFLFEISDNPSK 559
V S + Y+H + I H DLKP N+LL+ KD + DFGL+ SK
Sbjct: 155 IRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF-----EASK 206
Query: 560 NQTVSIGLKGSIGYIPPEHMNGQVSILGDIYSYGILLLEMFTGKRP 605
IG + YI PE ++G D++S G++L + +G P
Sbjct: 207 KMKDKIG---TAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPP 249
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 121/258 (46%), Gaps = 34/258 (13%)
Query: 389 DNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKL--QQQGALKSFIDECNALKSTRHR 445
+NF K IG G++G VYK G +VA+K ++L + +G + I E + LK H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 446 NILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAID 505
NI++++ + E + LVFEF+ + +L +++ S L +I+ +
Sbjct: 70 NIVKLLDVIHT---ENKLY--LVFEFL-HQDLKKFMDASALTGI---PLPLIK--SYLFQ 118
Query: 506 VASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSI 565
+ L + H H + H DLKP N+L++ + + DFGLA+ F + ++ V
Sbjct: 119 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVV-- 172
Query: 566 GLKGSIGYIPPEHMNGQ--VSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSI----HMF 619
++ Y PE + G S DI+S G + EM T + +F D I +F
Sbjct: 173 ----TLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQLFRIF 224
Query: 620 VSMALPDHVMDILDPSMP 637
++ PD V+ SMP
Sbjct: 225 RTLGTPDEVVWPGVTSMP 242
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 111/232 (47%), Gaps = 30/232 (12%)
Query: 383 DISKSTDNFSKENLIGTGSFGSVY----KGTLGDGTIVAIKVLKLQQQGALKS---FIDE 435
++++ S+E +G GSFG VY KG + D + + + + +++ F++E
Sbjct: 15 EVAREKITMSRE--LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 72
Query: 436 CNALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLH---PSPAEHYQFK 492
+ +K +++R++ S ++ E M+ G+L +L P +
Sbjct: 73 ASVMKEFNCHHVVRLLGVVSQ-----GQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 127
Query: 493 KLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFE 552
S+ + + +A ++A + YL+ + H DL N ++ +D T +GDFG+ + + E
Sbjct: 128 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXE 184
Query: 553 ISDNPSKNQTVSIGLKG--SIGYIPPEHM-NGQVSILGDIYSYGILLLEMFT 601
+D K G KG + ++ PE + +G + D++S+G++L E+ T
Sbjct: 185 -TDXXRK------GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 106/251 (42%), Gaps = 36/251 (14%)
Query: 389 DNFSKENLIGTGSFGSVYKGTLGDGT-IVAIKVL---KLQQQGALKSFIDECNALKSTRH 444
++F +G G FG+VY I+A+KVL +L++ G E RH
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 445 RNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVI--QRLNI 502
NILR+ L+ E+ G + + + +KLS QR
Sbjct: 72 PNILRLYGYFHDATR-----VYLILEYAPLGTV----------YRELQKLSRFDEQRTAT 116
Query: 503 AI-DVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQ 561
I ++A+AL Y H + H D+KP N+LL + + DFG + PS +
Sbjct: 117 YITELANALSYCH---SKRVIHRDIKPENLLLGSNGELKIADFGWS------VHAPSSRR 167
Query: 562 TVSIGLKGSIGYIPPEHMNGQVSILG-DIYSYGILLLEMFTGKRP-TGDMFKDDFSIHMF 619
T L G++ Y+PPE + G++ D++S G+L E G P +++ +
Sbjct: 168 TT---LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISR 224
Query: 620 VSMALPDHVMD 630
V PD V +
Sbjct: 225 VEFTFPDFVTE 235
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 110/230 (47%), Gaps = 29/230 (12%)
Query: 384 ISKSTDNFSKENLIGTGSFGSVYKGTL---GDGTIVAIKVLKLQQQ---GALKSFIDECN 437
I K T+ F K ++G+G+FG+VYKG G+ + + +++L++ A K +DE
Sbjct: 45 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAY 103
Query: 438 ALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVI 497
+ S + ++ R++ C + ++ L+ + M G L ++ EH +
Sbjct: 104 VMASVDNPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVR----EHKD--NIGSQ 151
Query: 498 QRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNP 557
LN + +A ++YL D + H DL NVL+ + DFGLAK L
Sbjct: 152 YLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL-----GA 203
Query: 558 SKNQTVSIGLKGSIGYIPPEHMNGQV-SILGDIYSYGILLLEMFT-GKRP 605
+ + + G K I ++ E + ++ + D++SYG+ + E+ T G +P
Sbjct: 204 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 253
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 121/260 (46%), Gaps = 34/260 (13%)
Query: 387 STDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKL--QQQGALKSFIDECNALKSTR 443
S +NF K IG G++G VYK G +VA+K ++L + +G + I E + LK
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 444 HRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIA 503
H NI++++ + E + LVFEF+ + +L ++ S L +I+ +
Sbjct: 61 HPNIVKLLDVIHT---ENKLY--LVFEFL-HQDLKDFMDASALTGI---PLPLIK--SYL 109
Query: 504 IDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTV 563
+ L + H H + H DLKP N+L++ + + DFGLA+ F + ++ V
Sbjct: 110 FQLLQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVV 165
Query: 564 SIGLKGSIGYIPPEHMNG--QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSI----H 617
++ Y PE + G S DI+S G + EM T + +F D I
Sbjct: 166 ------TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQLFR 215
Query: 618 MFVSMALPDHVMDILDPSMP 637
+F ++ PD V+ SMP
Sbjct: 216 IFRTLGTPDEVVWPGVTSMP 235
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 121/258 (46%), Gaps = 34/258 (13%)
Query: 389 DNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKL--QQQGALKSFIDECNALKSTRHR 445
+NF K IG G++G VYK G +VA+K ++L + +G + I E + LK H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 446 NILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAID 505
NI++++ + E + LVFEF+ + +L +++ S L +I+ +
Sbjct: 70 NIVKLLDVIHT---ENKLY--LVFEFL-HQDLKKFMDASALTGI---PLPLIK--SYLFQ 118
Query: 506 VASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSI 565
+ L + H H + H DLKP N+L++ + + DFGLA+ F + ++ V
Sbjct: 119 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVV-- 172
Query: 566 GLKGSIGYIPPEHMNG--QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSI----HMF 619
++ Y PE + G S DI+S G + EM T + +F D I +F
Sbjct: 173 ----TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQLFRIF 224
Query: 620 VSMALPDHVMDILDPSMP 637
++ PD V+ SMP
Sbjct: 225 RTLGTPDEVVWPGVTSMP 242
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 121/258 (46%), Gaps = 34/258 (13%)
Query: 389 DNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKL--QQQGALKSFIDECNALKSTRHR 445
+NF K IG G++G VYK G +VA+K ++L + +G + I E + LK H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 446 NILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAID 505
NI++++ + E + LVFEF+ + +L +++ S L +I+ +
Sbjct: 63 NIVKLLDVIHT---ENKLY--LVFEFL-HQDLKKFMDASALTGI---PLPLIK--SYLFQ 111
Query: 506 VASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSI 565
+ L + H H + H DLKP N+L++ + + DFGLA+ F + ++ V
Sbjct: 112 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVV-- 165
Query: 566 GLKGSIGYIPPEHMNG--QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSI----HMF 619
++ Y PE + G S DI+S G + EM T + +F D I +F
Sbjct: 166 ----TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR----ALFPGDSEIDQLFRIF 217
Query: 620 VSMALPDHVMDILDPSMP 637
++ PD V+ SMP
Sbjct: 218 RTLGTPDEVVWPGVTSMP 235
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 106/251 (42%), Gaps = 36/251 (14%)
Query: 389 DNFSKENLIGTGSFGSVYKGTLGDGT-IVAIKVL---KLQQQGALKSFIDECNALKSTRH 444
++F +G G FG+VY I+A+KVL +L++ G E RH
Sbjct: 11 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 70
Query: 445 RNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVI--QRLNI 502
NILR+ L+ E+ G + + + +KLS QR
Sbjct: 71 PNILRLYGYFHDATR-----VYLILEYAPLGTV----------YRELQKLSKFDEQRTAT 115
Query: 503 AI-DVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQ 561
I ++A+AL Y H + H D+KP N+LL + DFG + PS +
Sbjct: 116 YITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRR 166
Query: 562 TVSIGLKGSIGYIPPEHMNGQVSILG-DIYSYGILLLEMFTGKRP-TGDMFKDDFSIHMF 619
L G++ Y+PPE + G++ D++S G+L E GK P + +++ +
Sbjct: 167 D---DLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 223
Query: 620 VSMALPDHVMD 630
V PD V +
Sbjct: 224 VEFTFPDFVTE 234
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 121/258 (46%), Gaps = 34/258 (13%)
Query: 389 DNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKL--QQQGALKSFIDECNALKSTRHR 445
+NF K IG G++G VYK G +VA+K ++L + +G + I E + LK H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 446 NILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAID 505
NI++++ + E + LVFEF+ + +L +++ S L +I+ +
Sbjct: 63 NIVKLLDVIHT---ENKLY--LVFEFL-HQDLKKFMDASALTGI---PLPLIK--SYLFQ 111
Query: 506 VASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSI 565
+ L + H H + H DLKP N+L++ + + DFGLA+ F + ++ V
Sbjct: 112 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVV-- 165
Query: 566 GLKGSIGYIPPEHMNGQ--VSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSI----HMF 619
++ Y PE + G S DI+S G + EM T + +F D I +F
Sbjct: 166 ----TLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRR----ALFPGDSEIDQLFRIF 217
Query: 620 VSMALPDHVMDILDPSMP 637
++ PD V+ SMP
Sbjct: 218 RTLGTPDEVVWPGVTSMP 235
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 130/280 (46%), Gaps = 52/280 (18%)
Query: 368 GTIPKEVRQSG---MSYSDISKSTDNFSKENLIGTGSFGSVYKG--TLGDGTIVAIKVLK 422
GT+ + + G +S + + S D + + +G G++G VYK T+ + T VAIK ++
Sbjct: 10 GTLEAQTQGPGSMSVSAAPSATSIDRYRRITKLGEGTYGEVYKAIDTVTNET-VAIKRIR 68
Query: 423 LQ--QQGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQW 480
L+ ++G + I E + LK +HRNI+ + + + N L+FE+ N +L ++
Sbjct: 69 LEHEEEGVPGTAIREVSLLKELQHRNIIELKSV-----IHHNHRLHLIFEYAEN-DLKKY 122
Query: 481 LHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLH-HHCDTPIAHCDLKPSNVLL---DKD 536
+ +P + K + Q +N +++ H C H DLKP N+LL D
Sbjct: 123 MDKNPDVSMRVIKSFLYQLIN-------GVNFCHSRRC----LHRDLKPQNLLLSVSDAS 171
Query: 537 MTA--HVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG--QVSILGDIYSY 592
T +GDFGLA+ F I P + T I ++ Y PPE + G S DI+S
Sbjct: 172 ETPVLKIGDFGLAR-AFGI---PIRQFTHEI---ITLWYRPPEILLGSRHYSTSVDIWSI 224
Query: 593 GILLLEM------FTGKRPTGDMFKDDFSIHMFVSMALPD 626
+ EM F G +FK +F + LPD
Sbjct: 225 ACIWAEMLMKTPLFPGDSEIDQLFK------IFEVLGLPD 258
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 121/258 (46%), Gaps = 34/258 (13%)
Query: 389 DNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKL--QQQGALKSFIDECNALKSTRHR 445
+NF K IG G++G VYK G +VA+K ++L + +G + I E + LK H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 446 NILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAID 505
NI++++ + E + LVFEF+ + +L +++ S L +I+ +
Sbjct: 63 NIVKLLDVIHT---ENKLY--LVFEFL-HQDLKKFMDASALTGI---PLPLIK--SYLFQ 111
Query: 506 VASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSI 565
+ L + H H + H DLKP N+L++ + + DFGLA+ F + ++ V
Sbjct: 112 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVV-- 165
Query: 566 GLKGSIGYIPPEHMNG--QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSI----HMF 619
++ Y PE + G S DI+S G + EM T + +F D I +F
Sbjct: 166 ----TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQLFRIF 217
Query: 620 VSMALPDHVMDILDPSMP 637
++ PD V+ SMP
Sbjct: 218 RTLGTPDEVVWPGVTSMP 235
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 121/258 (46%), Gaps = 34/258 (13%)
Query: 389 DNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKL--QQQGALKSFIDECNALKSTRHR 445
+NF K IG G++G VYK G +VA+K ++L + +G + I E + LK H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 446 NILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAID 505
NI++++ + E + LVFEF+ + +L +++ S L +I+ +
Sbjct: 62 NIVKLLDVIHT---ENKLY--LVFEFL-HQDLKKFMDASALTGI---PLPLIK--SYLFQ 110
Query: 506 VASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSI 565
+ L + H H + H DLKP N+L++ + + DFGLA+ F + ++ V
Sbjct: 111 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVV-- 164
Query: 566 GLKGSIGYIPPEHMNG--QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSI----HMF 619
++ Y PE + G S DI+S G + EM T + +F D I +F
Sbjct: 165 ----TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQLFRIF 216
Query: 620 VSMALPDHVMDILDPSMP 637
++ PD V+ SMP
Sbjct: 217 RTLGTPDEVVWPGVTSMP 234
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 121/258 (46%), Gaps = 34/258 (13%)
Query: 389 DNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKL--QQQGALKSFIDECNALKSTRHR 445
+NF K IG G++G VYK G +VA+K ++L + +G + I E + LK H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 446 NILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAID 505
NI++++ + E + LVFEF+ + +L +++ S L +I+ +
Sbjct: 62 NIVKLLDVIHT---ENKLY--LVFEFL-HQDLKKFMDASALTGI---PLPLIK--SYLFQ 110
Query: 506 VASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSI 565
+ L + H H + H DLKP N+L++ + + DFGLA+ F + ++ V
Sbjct: 111 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVV-- 164
Query: 566 GLKGSIGYIPPEHMNG--QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSI----HMF 619
++ Y PE + G S DI+S G + EM T + +F D I +F
Sbjct: 165 ----TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQLFRIF 216
Query: 620 VSMALPDHVMDILDPSMP 637
++ PD V+ SMP
Sbjct: 217 RTLGTPDEVVWPGVTSMP 234
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 121/258 (46%), Gaps = 34/258 (13%)
Query: 389 DNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKL--QQQGALKSFIDECNALKSTRHR 445
+NF K IG G++G VYK G +VA+K ++L + +G + I E + LK H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 446 NILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAID 505
NI++++ + E + LVFEF+ + +L +++ S L +I+ +
Sbjct: 62 NIVKLLDVIHT---ENKLY--LVFEFL-HQDLKKFMDASALTGI---PLPLIK--SYLFQ 110
Query: 506 VASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSI 565
+ L + H H + H DLKP N+L++ + + DFGLA+ F + ++ V
Sbjct: 111 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVV-- 164
Query: 566 GLKGSIGYIPPEHMNG--QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSI----HMF 619
++ Y PE + G S DI+S G + EM T + +F D I +F
Sbjct: 165 ----TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQLFRIF 216
Query: 620 VSMALPDHVMDILDPSMP 637
++ PD V+ SMP
Sbjct: 217 RTLGTPDEVVWPGVTSMP 234
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 121/258 (46%), Gaps = 34/258 (13%)
Query: 389 DNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKL--QQQGALKSFIDECNALKSTRHR 445
+NF K IG G++G VYK G +VA+K ++L + +G + I E + LK H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 446 NILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAID 505
NI++++ + E + LVFEF+ + +L +++ S L +I+ +
Sbjct: 62 NIVKLLDVIHT---ENKLY--LVFEFL-HQDLKKFMDASALTGI---PLPLIK--SYLFQ 110
Query: 506 VASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSI 565
+ L + H H + H DLKP N+L++ + + DFGLA+ F + ++ V
Sbjct: 111 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVV-- 164
Query: 566 GLKGSIGYIPPEHMNG--QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSI----HMF 619
++ Y PE + G S DI+S G + EM T + +F D I +F
Sbjct: 165 ----TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQLFRIF 216
Query: 620 VSMALPDHVMDILDPSMP 637
++ PD V+ SMP
Sbjct: 217 RTLGTPDEVVWPGVTSMP 234
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 104/228 (45%), Gaps = 41/228 (17%)
Query: 394 ENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQQGAL---KSFIDECNAL-KSTRHRNIL 448
+++IG G+FG V K + DG + + ++++ + + F E L K H NI+
Sbjct: 20 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 79
Query: 449 RVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPS------PA---EHYQFKKLSVIQR 499
++ AC E + L E+ +GNL +L S PA + LS Q
Sbjct: 80 NLLGAC-----EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 134
Query: 500 LNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSK 559
L+ A DVA +DYL H DL N+L+ ++ A + DFGL S+
Sbjct: 135 LHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGL-----------SR 180
Query: 560 NQTVSIGLKGSIGYIPP-----EHMNGQVSIL-GDIYSYGILLLEMFT 601
Q V + K ++G +P E +N V D++SYG+LL E+ +
Sbjct: 181 GQEVYV--KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 110/235 (46%), Gaps = 28/235 (11%)
Query: 373 EVRQSGMSYSDISKSTDNFSKENLIGTGSFGSVYKGT-LGDGTIVAIKVLKLQQQGALKS 431
E +S +S D K F K IG G+ G+VY + G VAI+ + LQQQ +
Sbjct: 8 EKLRSIVSVGDPKKKYTRFEK---IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKEL 64
Query: 432 FIDECNALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQF 491
I+E ++ ++ NI+ + + L G++ +V E+++ G+L + + + Q
Sbjct: 65 IINEILVMRENKNPNIVNYLDSY----LVGDEL-WVVMEYLAGGSLTDVVTETCMDEGQI 119
Query: 492 KKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLF 551
+ + AL++LH + + H D+K N+LL D + + DFG F
Sbjct: 120 AA--------VCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFG---FCA 165
Query: 552 EISDNPSKNQTVSIGLKGSIGYIPPEHMNGQV-SILGDIYSYGILLLEMFTGKRP 605
+I+ SK + G+ ++ PE + + DI+S GI+ +EM G+ P
Sbjct: 166 QITPEQSKRSX----MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 216
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 104/228 (45%), Gaps = 41/228 (17%)
Query: 394 ENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQQGAL---KSFIDECNAL-KSTRHRNIL 448
+++IG G+FG V K + DG + + ++++ + + F E L K H NI+
Sbjct: 30 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 89
Query: 449 RVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPS------PA---EHYQFKKLSVIQR 499
++ AC E + L E+ +GNL +L S PA + LS Q
Sbjct: 90 NLLGAC-----EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 144
Query: 500 LNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSK 559
L+ A DVA +DYL H DL N+L+ ++ A + DFGL S+
Sbjct: 145 LHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGL-----------SR 190
Query: 560 NQTVSIGLKGSIGYIPP-----EHMNGQVSIL-GDIYSYGILLLEMFT 601
Q V + K ++G +P E +N V D++SYG+LL E+ +
Sbjct: 191 GQEVYV--KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 110/235 (46%), Gaps = 28/235 (11%)
Query: 373 EVRQSGMSYSDISKSTDNFSKENLIGTGSFGSVYKGT-LGDGTIVAIKVLKLQQQGALKS 431
E +S +S D K F K IG G+ G+VY + G VAI+ + LQQQ +
Sbjct: 7 EKLRSIVSVGDPKKKYTRFEK---IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKEL 63
Query: 432 FIDECNALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQF 491
I+E ++ ++ NI+ + + L G++ +V E+++ G+L + + + Q
Sbjct: 64 IINEILVMRENKNPNIVNYLDSY----LVGDEL-WVVMEYLAGGSLTDVVTETCMDEGQI 118
Query: 492 KKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLF 551
+ + AL++LH + + H D+K N+LL D + + DFG F
Sbjct: 119 AA--------VCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFG---FCA 164
Query: 552 EISDNPSKNQTVSIGLKGSIGYIPPEHMNGQV-SILGDIYSYGILLLEMFTGKRP 605
+I+ SK + G+ ++ PE + + DI+S GI+ +EM G+ P
Sbjct: 165 QITPEQSKRSX----MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 121/258 (46%), Gaps = 34/258 (13%)
Query: 389 DNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKL--QQQGALKSFIDECNALKSTRHR 445
+NF K IG G++G VYK G +VA+K ++L + +G + I E + LK H
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 446 NILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAID 505
NI++++ + E + LVFEF+ + +L +++ S L +I+ +
Sbjct: 67 NIVKLLDVIHT---ENKLY--LVFEFL-HQDLKKFMDASALTGI---PLPLIK--SYLFQ 115
Query: 506 VASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSI 565
+ L + H H + H DLKP N+L++ + + DFGLA+ F + ++ V
Sbjct: 116 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVV-- 169
Query: 566 GLKGSIGYIPPEHMNG--QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSI----HMF 619
++ Y PE + G S DI+S G + EM T + +F D I +F
Sbjct: 170 ----TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQLFRIF 221
Query: 620 VSMALPDHVMDILDPSMP 637
++ PD V+ SMP
Sbjct: 222 RTLGTPDEVVWPGVTSMP 239
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 121/258 (46%), Gaps = 34/258 (13%)
Query: 389 DNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKL--QQQGALKSFIDECNALKSTRHR 445
+NF K IG G++G VYK G +VA+K ++L + +G + I E + LK H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 446 NILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAID 505
NI++++ + E + LVFEF+ + +L +++ S L +I+ +
Sbjct: 64 NIVKLLDVIHT---ENKLY--LVFEFL-HQDLKKFMDASALTGI---PLPLIK--SYLFQ 112
Query: 506 VASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSI 565
+ L + H H + H DLKP N+L++ + + DFGLA+ F + ++ V
Sbjct: 113 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVV-- 166
Query: 566 GLKGSIGYIPPEHMNG--QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSI----HMF 619
++ Y PE + G S DI+S G + EM T + +F D I +F
Sbjct: 167 ----TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQLFRIF 218
Query: 620 VSMALPDHVMDILDPSMP 637
++ PD V+ SMP
Sbjct: 219 RTLGTPDEVVWPGVTSMP 236
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 102/223 (45%), Gaps = 40/223 (17%)
Query: 398 GTGSFGSVYKGTLGDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRVITACSSV 457
G FG V+K L + VA+K+ LQ + + +S E + +H N+L+ I A
Sbjct: 24 ARGRFGCVWKAQLMN-DFVAVKIFPLQDKQSWQS-EREIFSTPGMKHENLLQFIAA---- 77
Query: 458 DLEGNDFKA---LVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLH 514
+ G++ + L+ F G+L +L + ++ + ++A ++ L YLH
Sbjct: 78 EKRGSNLEVELWLITAFHDKGSLTDYL--------KGNIITWNELCHVAETMSRGLSYLH 129
Query: 515 HHCDTP----------IAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVS 564
D P IAH D K NVLL D+TA + DFGLA + P K +
Sbjct: 130 E--DVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLA-----VRFEPGKPPGDT 182
Query: 565 IGLKGSIGYIPPEHMNGQVSILG------DIYSYGILLLEMFT 601
G G+ Y+ PE + G ++ D+Y+ G++L E+ +
Sbjct: 183 HGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVS 225
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 109/230 (47%), Gaps = 29/230 (12%)
Query: 384 ISKSTDNFSKENLIGTGSFGSVYKGTL---GDGTIVAIKVLKLQQQ---GALKSFIDECN 437
I K T+ F K ++G+G+FG+VYKG G+ + + + +L++ A K +DE
Sbjct: 12 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 70
Query: 438 ALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVI 497
+ S + ++ R++ C + ++ L+ + M G L ++ EH +
Sbjct: 71 VMASVDNPHVCRLLGICLTSTVQ------LIMQLMPFGXLLDYVR----EHKD--NIGSQ 118
Query: 498 QRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNP 557
LN + +A ++YL D + H DL NVL+ + DFGLAK L
Sbjct: 119 YLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL-----GA 170
Query: 558 SKNQTVSIGLKGSIGYIPPEHMNGQV-SILGDIYSYGILLLEMFT-GKRP 605
+ + + G K I ++ E + ++ + D++SYG+ + E+ T G +P
Sbjct: 171 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 220
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 110/235 (46%), Gaps = 28/235 (11%)
Query: 373 EVRQSGMSYSDISKSTDNFSKENLIGTGSFGSVYKGT-LGDGTIVAIKVLKLQQQGALKS 431
E +S +S D K F K IG G+ G+VY + G VAI+ + LQQQ +
Sbjct: 7 EKLRSIVSVGDPKKKYTRFEK---IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKEL 63
Query: 432 FIDECNALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQF 491
I+E ++ ++ NI+ + + L G++ +V E+++ G+L + + + Q
Sbjct: 64 IINEILVMRENKNPNIVNYLDSY----LVGDEL-WVVMEYLAGGSLTDVVTETCMDEGQI 118
Query: 492 KKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLF 551
+ + AL++LH + + H D+K N+LL D + + DFG F
Sbjct: 119 AA--------VCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFG---FCA 164
Query: 552 EISDNPSKNQTVSIGLKGSIGYIPPEHMNGQV-SILGDIYSYGILLLEMFTGKRP 605
+I+ SK + G+ ++ PE + + DI+S GI+ +EM G+ P
Sbjct: 165 QITPEQSKRSE----MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 108/229 (47%), Gaps = 28/229 (12%)
Query: 379 MSYSDISKSTDNFSKENLIGTGSFGSVYKGT-LGDGTIVAIKVLKLQQQGALKSFIDECN 437
+S D K F K IG G+ G+VY + G VAI+ + LQQQ + I+E
Sbjct: 14 VSVGDPKKKYTRFEK---IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEIL 70
Query: 438 ALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVI 497
++ ++ NI+ + + L G++ +V E+++ G+L + + + Q
Sbjct: 71 VMRENKNPNIVNYLDSY----LVGDEL-WVVMEYLAGGSLTDVVTETCMDEGQIAA---- 121
Query: 498 QRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNP 557
+ + AL++LH + + H ++K N+LL D + + DFG F +I+
Sbjct: 122 ----VCRECLQALEFLHSN---QVIHRNIKSDNILLGMDGSVKLTDFG---FCAQITPEQ 171
Query: 558 SKNQTVSIGLKGSIGYIPPEHMNGQV-SILGDIYSYGILLLEMFTGKRP 605
SK T + G+ ++ PE + + DI+S GI+ +EM G+ P
Sbjct: 172 SKRST----MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 216
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 109/230 (47%), Gaps = 29/230 (12%)
Query: 384 ISKSTDNFSKENLIGTGSFGSVYKGTL---GDGTIVAIKVLKLQQQ---GALKSFIDECN 437
I K T+ F K ++G+G+FG+VYKG G+ + + + +L++ A K +DE
Sbjct: 13 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 71
Query: 438 ALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVI 497
+ S + ++ R++ C + ++ L+ + M G L ++ EH +
Sbjct: 72 VMASVDNPHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYVR----EHKD--NIGSQ 119
Query: 498 QRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNP 557
LN + +A ++YL D + H DL NVL+ + DFGLAK L
Sbjct: 120 YLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL-----GA 171
Query: 558 SKNQTVSIGLKGSIGYIPPEHMNGQV-SILGDIYSYGILLLEMFT-GKRP 605
+ + + G K I ++ E + ++ + D++SYG+ + E+ T G +P
Sbjct: 172 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 221
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 98/214 (45%), Gaps = 23/214 (10%)
Query: 395 NLIGTGSFGSVYKGTLGD-GTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRVITA 453
++G G FG K T + G ++ +K L + ++F+ E ++ H N+L+ I
Sbjct: 16 EVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGV 75
Query: 454 CSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYL 513
L + + E++ G L + + S Y + QR++ A D+AS + YL
Sbjct: 76 -----LYKDKRLNFITEYIKGGTL-RGIIKSMDSQYPWS-----QRVSFAKDIASGMAYL 124
Query: 514 HHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNP-------SKNQTVSIG 566
H I H DL N L+ ++ V DFGLA+ + + P ++
Sbjct: 125 H---SMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYT 181
Query: 567 LKGSIGYIPPEHMNGQ-VSILGDIYSYGILLLEM 599
+ G+ ++ PE +NG+ D++S+GI+L E+
Sbjct: 182 VVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEI 215
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 109/230 (47%), Gaps = 29/230 (12%)
Query: 384 ISKSTDNFSKENLIGTGSFGSVYKGTL---GDGTIVAIKVLKLQQQ---GALKSFIDECN 437
I K T+ F K ++G+G+FG+VYKG G+ + + + +L++ A K +DE
Sbjct: 11 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 69
Query: 438 ALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVI 497
+ S + ++ R++ C + ++ L+ + M G L ++ EH +
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYVR----EHKD--NIGSQ 117
Query: 498 QRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNP 557
LN + +A ++YL D + H DL NVL+ + DFGLAK L
Sbjct: 118 YLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL-----GA 169
Query: 558 SKNQTVSIGLKGSIGYIPPEHMNGQV-SILGDIYSYGILLLEMFT-GKRP 605
+ + + G K I ++ E + ++ + D++SYG+ + E+ T G +P
Sbjct: 170 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 109/230 (47%), Gaps = 29/230 (12%)
Query: 384 ISKSTDNFSKENLIGTGSFGSVYKGTL---GDGTIVAIKVLKLQQQ---GALKSFIDECN 437
I K T+ F K ++G+G+FG+VYKG G+ + + + +L++ A K +DE
Sbjct: 14 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 72
Query: 438 ALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVI 497
+ S + ++ R++ C + ++ L+ + M G L ++ EH +
Sbjct: 73 VMASVDNPHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYVR----EHKD--NIGSQ 120
Query: 498 QRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNP 557
LN + +A ++YL D + H DL NVL+ + DFGLAK L
Sbjct: 121 YLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL-----GA 172
Query: 558 SKNQTVSIGLKGSIGYIPPEHMNGQV-SILGDIYSYGILLLEMFT-GKRP 605
+ + + G K I ++ E + ++ + D++SYG+ + E+ T G +P
Sbjct: 173 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 222
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 111/236 (47%), Gaps = 29/236 (12%)
Query: 378 GMSYSDISKSTDNFSKENLIGTGSFGSVYKGTL---GDGTIVAIKVLKLQQQ---GALKS 431
M+ I K T+ F K ++G+G+FG+VYKG G+ + + + +L++ A K
Sbjct: 2 AMALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE 60
Query: 432 FIDECNALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQF 491
+DE + S + ++ R++ C + ++ L+ + M G L ++ EH
Sbjct: 61 ILDEAYVMASVDNPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVR----EHKD- 109
Query: 492 KKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLF 551
+ LN + +A ++YL D + H DL NVL+ + DFGLAK L
Sbjct: 110 -NIGSQYLLNWCVQIAEGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL- 164
Query: 552 EISDNPSKNQTVSIGLKGSIGYIPPEHMNGQV-SILGDIYSYGILLLEMFT-GKRP 605
+ + + G K I ++ E + ++ + D++SYG+ + E+ T G +P
Sbjct: 165 ----GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 216
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 101/232 (43%), Gaps = 30/232 (12%)
Query: 389 DNFSKENLIGTGSFGSVYKGTLGD-GTIVAIKVLK---LQQQGALKSFIDECNALKSTRH 444
DNF ++G GSFG V + + G + A+KVLK + Q ++ + E L R+
Sbjct: 23 DNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARN 82
Query: 445 RNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAI 504
L + C + D V EF++ G+L + S ++ + A
Sbjct: 83 HPFLTQLFCC----FQTPDRLFFVMEFVNGGDLMFHIQKS-------RRFDEARARFYAA 131
Query: 505 DVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVS 564
++ SAL +LH D I + DLK NVLLD + + DFG+ K N +
Sbjct: 132 EIISALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCK-------EGICNGVTT 181
Query: 565 IGLKGSIGYIPPEHMNGQVSILG---DIYSYGILLLEMFTGKRPTGDMFKDD 613
G+ YI PE + Q + G D ++ G+LL EM G P +DD
Sbjct: 182 ATFCGTPDYIAPEIL--QEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDD 231
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 109/230 (47%), Gaps = 29/230 (12%)
Query: 384 ISKSTDNFSKENLIGTGSFGSVYKGTL---GDGTIVAIKVLKLQQQ---GALKSFIDECN 437
I K T+ F K ++G+G+FG+VYKG G+ + + + +L++ A K +DE
Sbjct: 12 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 70
Query: 438 ALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVI 497
+ S + ++ R++ C + ++ L+ + M G L ++ EH +
Sbjct: 71 VMASVDNPHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYVR----EHKD--NIGSQ 118
Query: 498 QRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNP 557
LN + +A ++YL D + H DL NVL+ + DFGLAK L
Sbjct: 119 YLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL-----GA 170
Query: 558 SKNQTVSIGLKGSIGYIPPEHMNGQV-SILGDIYSYGILLLEMFT-GKRP 605
+ + + G K I ++ E + ++ + D++SYG+ + E+ T G +P
Sbjct: 171 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 220
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 109/230 (47%), Gaps = 29/230 (12%)
Query: 384 ISKSTDNFSKENLIGTGSFGSVYKGTL---GDGTIVAIKVLKLQQQ---GALKSFIDECN 437
I K T+ F K ++G+G+FG+VYKG G+ + + + +L++ A K +DE
Sbjct: 15 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 73
Query: 438 ALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVI 497
+ S + ++ R++ C + ++ L+ + M G L ++ EH +
Sbjct: 74 VMASVDNPHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYVR----EHKD--NIGSQ 121
Query: 498 QRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNP 557
LN + +A ++YL D + H DL NVL+ + DFGLAK L
Sbjct: 122 YLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL-----GA 173
Query: 558 SKNQTVSIGLKGSIGYIPPEHMNGQV-SILGDIYSYGILLLEMFT-GKRP 605
+ + + G K I ++ E + ++ + D++SYG+ + E+ T G +P
Sbjct: 174 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 223
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 105/219 (47%), Gaps = 41/219 (18%)
Query: 400 GSFGSVYKGTLGDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRVITA---CSS 456
G FG V+K L + VA+K+ +Q + + ++ E +L +H NIL+ I A +S
Sbjct: 35 GRFGCVWKAQLLN-EYVAVKIFPIQDKQSWQNEY-EVYSLPGMKHENILQFIGAEKRGTS 92
Query: 457 VDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHH 516
VD++ L+ F G+L +L + +S + +IA +A L YLH
Sbjct: 93 VDVD----LWLITAFHEKGSLSDFLKANV--------VSWNELCHIAETMARGLAYLHE- 139
Query: 517 CDTP---------IAHCDLKPSNVLLDKDMTAHVGDFGLA-KFLFEISDNPSKNQTVSIG 566
D P I+H D+K NVLL ++TA + DFGLA KF K+ + G
Sbjct: 140 -DIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKF------EAGKSAGDTHG 192
Query: 567 LKGSIGYIPPEHMNGQVSILG------DIYSYGILLLEM 599
G+ Y+ PE + G ++ D+Y+ G++L E+
Sbjct: 193 QVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWEL 231
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 100/218 (45%), Gaps = 22/218 (10%)
Query: 394 ENLIGTGSFGSVYKGTLGDGTI----VAIKVL-KLQQQGALKSFIDECNALKSTRHRNIL 448
+ +IG G FG VY G D AIK L ++ + +++F+ E ++ H N+L
Sbjct: 26 DRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVL 85
Query: 449 RVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVAS 508
+I + L ++ +M +G+L Q++ SP + K L ++ + VA
Sbjct: 86 ALI----GIMLPPEGLPHVLLPYMCHGDLLQFIR-SPQRNPTVKDL-----ISFGLQVAR 135
Query: 509 ALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLK 568
++YL + H DL N +LD+ T V DFGLA+ +I D + +
Sbjct: 136 GMEYL---AEQKFVHRDLAARNCMLDESFTVKVADFGLAR---DILDREYYSVQQHRHAR 189
Query: 569 GSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRP 605
+ + E + + + D++S+G+LL E+ T P
Sbjct: 190 LPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAP 227
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 99/225 (44%), Gaps = 30/225 (13%)
Query: 390 NFSKENLIGTGSFGSV---YKGTLGDGTIVAIKVLKLQQQGALKSFID-ECNALKSTRHR 445
N+ +G GSFG V Y T G + I K+ + ++ I+ E + L+ RH
Sbjct: 15 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 74
Query: 446 NILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAID 505
+I+++ S D +V E+ N D + Q K+S +
Sbjct: 75 HIIKLYDVIKS-----KDEIIMVIEYAGNELFDYIV--------QRDKMSEQEARRFFQQ 121
Query: 506 VASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSI 565
+ SA++Y H H I H DLKP N+LLD+ + + DFGL+ + + N K
Sbjct: 122 IISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD--GNFLKTSC--- 173
Query: 566 GLKGSIGYIPPEHMNGQVSI--LGDIYSYGILLLEMFTGKRPTGD 608
GS Y PE ++G++ D++S G++L M + P D
Sbjct: 174 ---GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD 215
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 99/225 (44%), Gaps = 30/225 (13%)
Query: 390 NFSKENLIGTGSFGSV---YKGTLGDGTIVAIKVLKLQQQGALKSFID-ECNALKSTRHR 445
N+ +G GSFG V Y T G + I K+ + ++ I+ E + L+ RH
Sbjct: 5 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 64
Query: 446 NILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAID 505
+I+++ S D +V E+ N D + Q K+S +
Sbjct: 65 HIIKLYDVIKS-----KDEIIMVIEYAGNELFDYIV--------QRDKMSEQEARRFFQQ 111
Query: 506 VASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSI 565
+ SA++Y H H I H DLKP N+LLD+ + + DFGL+ + + N K
Sbjct: 112 IISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD--GNFLKTSC--- 163
Query: 566 GLKGSIGYIPPEHMNGQVSI--LGDIYSYGILLLEMFTGKRPTGD 608
GS Y PE ++G++ D++S G++L M + P D
Sbjct: 164 ---GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD 205
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 99/225 (44%), Gaps = 30/225 (13%)
Query: 390 NFSKENLIGTGSFGSV---YKGTLGDGTIVAIKVLKLQQQGALKSFID-ECNALKSTRHR 445
N+ +G GSFG V Y T G + I K+ + ++ I+ E + L+ RH
Sbjct: 14 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 73
Query: 446 NILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAID 505
+I+++ S D +V E+ N D + Q K+S +
Sbjct: 74 HIIKLYDVIKS-----KDEIIMVIEYAGNELFDYIV--------QRDKMSEQEARRFFQQ 120
Query: 506 VASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSI 565
+ SA++Y H H I H DLKP N+LLD+ + + DFGL+ + + N K
Sbjct: 121 IISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD--GNFLKTSC--- 172
Query: 566 GLKGSIGYIPPEHMNGQVSI--LGDIYSYGILLLEMFTGKRPTGD 608
GS Y PE ++G++ D++S G++L M + P D
Sbjct: 173 ---GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD 214
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 99/225 (44%), Gaps = 30/225 (13%)
Query: 390 NFSKENLIGTGSFGSV---YKGTLGDGTIVAIKVLKLQQQGALKSFID-ECNALKSTRHR 445
N+ +G GSFG V Y T G + I K+ + ++ I+ E + L+ RH
Sbjct: 9 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 68
Query: 446 NILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAID 505
+I+++ S D +V E+ N D + Q K+S +
Sbjct: 69 HIIKLYDVIKS-----KDEIIMVIEYAGNELFDYIV--------QRDKMSEQEARRFFQQ 115
Query: 506 VASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSI 565
+ SA++Y H H I H DLKP N+LLD+ + + DFGL+ + + N K
Sbjct: 116 IISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD--GNFLKTSC--- 167
Query: 566 GLKGSIGYIPPEHMNGQVSI--LGDIYSYGILLLEMFTGKRPTGD 608
GS Y PE ++G++ D++S G++L M + P D
Sbjct: 168 ---GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD 209
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 96/213 (45%), Gaps = 28/213 (13%)
Query: 403 GSVYKGTLGDGTIVAIKVLKLQQQGALKS--FIDECNALKSTRHRNILRVITACSSVDLE 460
G ++KG G + +KVLK++ KS F +EC L+ H N+L V+ AC S
Sbjct: 24 GELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQS---P 79
Query: 461 GNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTP 520
L+ +M G+L LH E F + Q + A+D+A + +L H +
Sbjct: 80 PAPHPTLITHWMPYGSLYNVLH----EGTNF-VVDQSQAVKFALDMARGMAFL-HTLEPL 133
Query: 521 IAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMN 580
I L +V++D+DMTA + KF F+ S G + ++ PE +
Sbjct: 134 IPRHALNSRSVMIDEDMTARIS-MADVKFSFQ-----------SPGRMYAPAWVAPEALQ 181
Query: 581 GQVSIL----GDIYSYGILLLEMFTGKRPTGDM 609
+ D++S+ +LL E+ T + P D+
Sbjct: 182 KKPEDTNRRSADMWSFAVLLWELVTREVPFADL 214
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 109/230 (47%), Gaps = 29/230 (12%)
Query: 384 ISKSTDNFSKENLIGTGSFGSVYKGTL---GDGTIVAIKVLKLQQQ---GALKSFIDECN 437
I K T+ F K ++G+G+FG+VYKG G+ + + + +L++ A K +DE
Sbjct: 11 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 69
Query: 438 ALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVI 497
+ S + ++ R++ C + ++ L+ + M G L ++ EH +
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQ------LITQLMPFGXLLDYVR----EHKD--NIGSQ 117
Query: 498 QRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNP 557
LN + +A ++YL D + H DL NVL+ + DFGLAK L
Sbjct: 118 YLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL-----GA 169
Query: 558 SKNQTVSIGLKGSIGYIPPEHMNGQV-SILGDIYSYGILLLEMFT-GKRP 605
+ + + G K I ++ E + ++ + D++SYG+ + E+ T G +P
Sbjct: 170 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 109/230 (47%), Gaps = 29/230 (12%)
Query: 384 ISKSTDNFSKENLIGTGSFGSVYKGTL---GDGTIVAIKVLKLQQQ---GALKSFIDECN 437
I K T+ F K ++G+G+FG+VYKG G+ + + + +L++ A K +DE
Sbjct: 13 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 71
Query: 438 ALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVI 497
+ S + ++ R++ C + ++ L+ + M G L ++ EH +
Sbjct: 72 VMASVDNPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVR----EHKD--NIGSQ 119
Query: 498 QRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNP 557
LN + +A ++YL D + H DL NVL+ + DFGLAK L
Sbjct: 120 YLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL-----GA 171
Query: 558 SKNQTVSIGLKGSIGYIPPEHMNGQV-SILGDIYSYGILLLEMFT-GKRP 605
+ + + G K I ++ E + ++ + D++SYG+ + E+ T G +P
Sbjct: 172 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 221
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 109/230 (47%), Gaps = 29/230 (12%)
Query: 384 ISKSTDNFSKENLIGTGSFGSVYKGTL---GDGTIVAIKVLKLQQQ---GALKSFIDECN 437
I K T+ F K ++G+G+FG+VYKG G+ + + + +L++ A K +DE
Sbjct: 14 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 72
Query: 438 ALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVI 497
+ S + ++ R++ C + ++ L+ + M G L ++ EH +
Sbjct: 73 VMASVDNPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVR----EHKD--NIGSQ 120
Query: 498 QRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNP 557
LN + +A ++YL D + H DL NVL+ + DFGLAK L
Sbjct: 121 YLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL-----GA 172
Query: 558 SKNQTVSIGLKGSIGYIPPEHMNGQV-SILGDIYSYGILLLEMFT-GKRP 605
+ + + G K I ++ E + ++ + D++SYG+ + E+ T G +P
Sbjct: 173 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 222
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 109/230 (47%), Gaps = 29/230 (12%)
Query: 384 ISKSTDNFSKENLIGTGSFGSVYKGTL---GDGTIVAIKVLKLQQQ---GALKSFIDECN 437
I K T+ F K ++G+G+FG+VYKG G+ + + + +L++ A K +DE
Sbjct: 11 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 69
Query: 438 ALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVI 497
+ S + ++ R++ C + ++ L+ + M G L ++ EH +
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVR----EHKD--NIGSQ 117
Query: 498 QRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNP 557
LN + +A ++YL D + H DL NVL+ + DFGLAK L
Sbjct: 118 YLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL-----GA 169
Query: 558 SKNQTVSIGLKGSIGYIPPEHMNGQV-SILGDIYSYGILLLEMFT-GKRP 605
+ + + G K I ++ E + ++ + D++SYG+ + E+ T G +P
Sbjct: 170 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 109/230 (47%), Gaps = 29/230 (12%)
Query: 384 ISKSTDNFSKENLIGTGSFGSVYKGTL---GDGTIVAIKVLKLQQQ---GALKSFIDECN 437
I K T+ F K ++G+G+FG+VYKG G+ + + + +L++ A K +DE
Sbjct: 14 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 72
Query: 438 ALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVI 497
+ S + ++ R++ C + ++ L+ + M G L ++ EH +
Sbjct: 73 VMASVDNPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVR----EHKD--NIGSQ 120
Query: 498 QRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNP 557
LN + +A ++YL D + H DL NVL+ + DFGLAK L
Sbjct: 121 YLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL-----GA 172
Query: 558 SKNQTVSIGLKGSIGYIPPEHMNGQV-SILGDIYSYGILLLEMFT-GKRP 605
+ + + G K I ++ E + ++ + D++SYG+ + E+ T G +P
Sbjct: 173 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 222
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 106/251 (42%), Gaps = 36/251 (14%)
Query: 389 DNFSKENLIGTGSFGSVYKGTLGDGT-IVAIKVL---KLQQQGALKSFIDECNALKSTRH 444
++F +G G FG+VY I+A+KVL +L++ G E RH
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 445 RNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVI--QRLNI 502
NILR+ L+ E+ G + + + +KLS QR
Sbjct: 72 PNILRLYGYFHDATR-----VYLILEYAPLGTV----------YRELQKLSRFDEQRTAT 116
Query: 503 AI-DVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQ 561
I ++A+AL Y H + H D+KP N+LL + + DFG + + S+
Sbjct: 117 YITELANALSYCH---SKRVIHRDIKPENLLLGSNGELKIADFG-----WSVHAPSSRRD 168
Query: 562 TVSIGLKGSIGYIPPEHMNGQVSILG-DIYSYGILLLEMFTGKRP-TGDMFKDDFSIHMF 619
T L G++ Y+PPE + G++ D++S G+L E G P +++ +
Sbjct: 169 T----LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISR 224
Query: 620 VSMALPDHVMD 630
V PD V +
Sbjct: 225 VEFTFPDFVTE 235
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 111/230 (48%), Gaps = 29/230 (12%)
Query: 384 ISKSTDNFSKENLIGTGSFGSVYKGTL---GDGTIVAIKVLKLQQQGALKS---FIDECN 437
I K T+ + ++G+G+FG+VYKG G+ + + + L + K+ F+DE
Sbjct: 34 ILKETE-LKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEAL 92
Query: 438 ALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVI 497
+ S H +++R++ C S ++ LV + M +G L +++H EH ++
Sbjct: 93 IMASMDHPHLVRLLGVCLSPTIQ------LVTQLMPHGCLLEYVH----EHKDNIGSQLL 142
Query: 498 QRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNP 557
LN + +A + YL + + H DL NVL+ + DFGLA+ L D
Sbjct: 143 --LNWCVQIAKGMMYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLE--GDEK 195
Query: 558 SKNQTVSIGLKGSIGYIPPEHMN-GQVSILGDIYSYGILLLEMFT-GKRP 605
N + G K I ++ E ++ + + D++SYG+ + E+ T G +P
Sbjct: 196 EYN---ADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKP 242
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 103/231 (44%), Gaps = 43/231 (18%)
Query: 386 KSTDNFSKENLIGTGSFGSVYKGTLGD-GTIVAIKVL------KLQQQGALKSFIDECNA 438
+S + + L+G GS+G V K D G IVAIK K+ ++ A++ E
Sbjct: 22 QSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMR----EIKL 77
Query: 439 LKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQW-LHPSPAEHYQFKKLSVI 497
LK RH N++ ++ C LVFEF+ + LD L P+ + YQ + +
Sbjct: 78 LKQLRHENLVNLLEVCKK-----KKRWYLVFEFVDHTILDDLELFPNGLD-YQVVQKYLF 131
Query: 498 QRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLF---EIS 554
Q +N + + H H I H D+KP N+L+ + + DFG A+ L E+
Sbjct: 132 QIIN-------GIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVY 181
Query: 555 DNPSKNQTVSIGLKGSIGYIPPEHMNGQVSI--LGDIYSYGILLLEMFTGK 603
D+ + Y PE + G V D+++ G L+ EMF G+
Sbjct: 182 DDEVATRW----------YRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGE 222
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 109/230 (47%), Gaps = 29/230 (12%)
Query: 384 ISKSTDNFSKENLIGTGSFGSVYKGTL---GDGTIVAIKVLKLQQQ---GALKSFIDECN 437
I K T+ F K ++G+G+FG+VYKG G+ + + + +L++ A K +DE
Sbjct: 14 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 72
Query: 438 ALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVI 497
+ S + ++ R++ C + ++ L+ + M G L ++ EH +
Sbjct: 73 VMASVDNPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVR----EHKD--NIGSQ 120
Query: 498 QRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNP 557
LN + +A ++YL D + H DL NVL+ + DFGLAK L
Sbjct: 121 YLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL-----GA 172
Query: 558 SKNQTVSIGLKGSIGYIPPEHMNGQV-SILGDIYSYGILLLEMFT-GKRP 605
+ + + G K I ++ E + ++ + D++SYG+ + E+ T G +P
Sbjct: 173 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 222
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 109/230 (47%), Gaps = 29/230 (12%)
Query: 384 ISKSTDNFSKENLIGTGSFGSVYKGTL---GDGTIVAIKVLKLQQQ---GALKSFIDECN 437
I K T+ F K ++G+G+FG+VYKG G+ + + + +L++ A K +DE
Sbjct: 18 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 76
Query: 438 ALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVI 497
+ S + ++ R++ C + ++ L+ + M G L ++ EH +
Sbjct: 77 VMASVDNPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVR----EHKD--NIGSQ 124
Query: 498 QRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNP 557
LN + +A ++YL D + H DL NVL+ + DFGLAK L
Sbjct: 125 YLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL-----GA 176
Query: 558 SKNQTVSIGLKGSIGYIPPEHMNGQV-SILGDIYSYGILLLEMFT-GKRP 605
+ + + G K I ++ E + ++ + D++SYG+ + E+ T G +P
Sbjct: 177 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 226
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 109/230 (47%), Gaps = 29/230 (12%)
Query: 384 ISKSTDNFSKENLIGTGSFGSVYKGTL---GDGTIVAIKVLKLQQQ---GALKSFIDECN 437
I K T+ F K ++G+G+FG+VYKG G+ + + + +L++ A K +DE
Sbjct: 11 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 69
Query: 438 ALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVI 497
+ S + ++ R++ C + ++ L+ + M G L ++ EH +
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVR----EHKD--NIGSQ 117
Query: 498 QRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNP 557
LN + +A ++YL D + H DL NVL+ + DFGLAK L
Sbjct: 118 YLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL-----GA 169
Query: 558 SKNQTVSIGLKGSIGYIPPEHMNGQV-SILGDIYSYGILLLEMFT-GKRP 605
+ + + G K I ++ E + ++ + D++SYG+ + E+ T G +P
Sbjct: 170 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 109/230 (47%), Gaps = 29/230 (12%)
Query: 384 ISKSTDNFSKENLIGTGSFGSVYKGTL---GDGTIVAIKVLKLQQQ---GALKSFIDECN 437
I K T+ F K ++G+G+FG+VYKG G+ + + + +L++ A K +DE
Sbjct: 21 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 79
Query: 438 ALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVI 497
+ S + ++ R++ C + ++ L+ + M G L ++ EH +
Sbjct: 80 VMASVDNPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVR----EHKD--NIGSQ 127
Query: 498 QRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNP 557
LN + +A ++YL D + H DL NVL+ + DFGLAK L
Sbjct: 128 YLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL-----GA 179
Query: 558 SKNQTVSIGLKGSIGYIPPEHMNGQV-SILGDIYSYGILLLEMFT-GKRP 605
+ + + G K I ++ E + ++ + D++SYG+ + E+ T G +P
Sbjct: 180 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 229
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 109/230 (47%), Gaps = 29/230 (12%)
Query: 384 ISKSTDNFSKENLIGTGSFGSVYKGTL---GDGTIVAIKVLKLQQQ---GALKSFIDECN 437
I K T+ F K ++G+G+FG+VYKG G+ + + + +L++ A K +DE
Sbjct: 5 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 63
Query: 438 ALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVI 497
+ S + ++ R++ C + ++ L+ + M G L ++ EH +
Sbjct: 64 VMASVDNPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVR----EHKD--NIGSQ 111
Query: 498 QRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNP 557
LN + +A ++YL D + H DL NVL+ + DFGLAK L
Sbjct: 112 YLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL-----GA 163
Query: 558 SKNQTVSIGLKGSIGYIPPEHMNGQV-SILGDIYSYGILLLEMFT-GKRP 605
+ + + G K I ++ E + ++ + D++SYG+ + E+ T G +P
Sbjct: 164 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 213
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 121/260 (46%), Gaps = 34/260 (13%)
Query: 387 STDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKL--QQQGALKSFIDECNALKSTR 443
S +NF K IG G++G VYK G +VA+K ++L + +G + I E + LK
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 444 HRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIA 503
H NI++++ + E + LVFE + + +L +++ S L +I+ +
Sbjct: 64 HPNIVKLLDVIHT---ENKLY--LVFEHV-DQDLKKFMDASALTGI---PLPLIK--SYL 112
Query: 504 IDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTV 563
+ L + H H + H DLKP N+L++ + + DFGLA+ F + ++ V
Sbjct: 113 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVV 168
Query: 564 SIGLKGSIGYIPPEHMNG--QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSI----H 617
++ Y PE + G S DI+S G + EM T + +F D I
Sbjct: 169 ------TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQLFR 218
Query: 618 MFVSMALPDHVMDILDPSMP 637
+F ++ PD V+ SMP
Sbjct: 219 IFRTLGTPDEVVWPGVTSMP 238
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 109/230 (47%), Gaps = 29/230 (12%)
Query: 384 ISKSTDNFSKENLIGTGSFGSVYKGTL---GDGTIVAIKVLKLQQQ---GALKSFIDECN 437
I K T+ F K ++G+G+FG+VYKG G+ + + + +L++ A K +DE
Sbjct: 36 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 94
Query: 438 ALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVI 497
+ S + ++ R++ C + ++ L+ + M G L ++ EH +
Sbjct: 95 VMASVDNPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVR----EHKD--NIGSQ 142
Query: 498 QRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNP 557
LN + +A ++YL D + H DL NVL+ + DFGLAK L
Sbjct: 143 YLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL-----GA 194
Query: 558 SKNQTVSIGLKGSIGYIPPEHMNGQV-SILGDIYSYGILLLEMFT-GKRP 605
+ + + G K I ++ E + ++ + D++SYG+ + E+ T G +P
Sbjct: 195 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 244
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 109/230 (47%), Gaps = 29/230 (12%)
Query: 384 ISKSTDNFSKENLIGTGSFGSVYKGTL---GDGTIVAIKVLKLQQQ---GALKSFIDECN 437
I K T+ F K ++G+G+FG+VYKG G+ + + + +L++ A K +DE
Sbjct: 17 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 75
Query: 438 ALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVI 497
+ S + ++ R++ C + ++ L+ + M G L ++ EH +
Sbjct: 76 VMASVDNPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVR----EHKD--NIGSQ 123
Query: 498 QRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNP 557
LN + +A ++YL D + H DL NVL+ + DFGLAK L
Sbjct: 124 YLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL-----GA 175
Query: 558 SKNQTVSIGLKGSIGYIPPEHMNGQV-SILGDIYSYGILLLEMFT-GKRP 605
+ + + G K I ++ E + ++ + D++SYG+ + E+ T G +P
Sbjct: 176 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 225
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 104/228 (45%), Gaps = 41/228 (17%)
Query: 394 ENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQQGAL---KSFIDECNAL-KSTRHRNIL 448
+++IG G+FG V K + DG + + ++++ + + F E L K H NI+
Sbjct: 27 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 86
Query: 449 RVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPS------PA---EHYQFKKLSVIQR 499
++ AC E + L E+ +GNL +L S PA + LS Q
Sbjct: 87 NLLGAC-----EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 141
Query: 500 LNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSK 559
L+ A DVA +DYL H +L N+L+ ++ A + DFGL S+
Sbjct: 142 LHFAADVARGMDYLSQ---KQFIHRNLAARNILVGENYVAKIADFGL-----------SR 187
Query: 560 NQTVSIGLKGSIGYIPP-----EHMNGQVSIL-GDIYSYGILLLEMFT 601
Q V + K ++G +P E +N V D++SYG+LL E+ +
Sbjct: 188 GQEVYV--KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 111/230 (48%), Gaps = 29/230 (12%)
Query: 384 ISKSTDNFSKENLIGTGSFGSVYKGTL---GDGTIVAIKVLKLQQQGALKS---FIDECN 437
I K T+ + ++G+G+FG+VYKG G+ + + + L + K+ F+DE
Sbjct: 11 ILKETE-LKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEAL 69
Query: 438 ALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVI 497
+ S H +++R++ C S ++ LV + M +G L +++H EH ++
Sbjct: 70 IMASMDHPHLVRLLGVCLSPTIQ------LVTQLMPHGCLLEYVH----EHKDNIGSQLL 119
Query: 498 QRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNP 557
LN + +A + YL + + H DL NVL+ + DFGLA+ L
Sbjct: 120 --LNWCVQIAKGMMYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGLARLL-----EG 169
Query: 558 SKNQTVSIGLKGSIGYIPPEHMN-GQVSILGDIYSYGILLLEMFT-GKRP 605
+ + + G K I ++ E ++ + + D++SYG+ + E+ T G +P
Sbjct: 170 DEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKP 219
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 106/218 (48%), Gaps = 32/218 (14%)
Query: 397 IGTGSFGSVYKGTLGD------GTIVAIKVLKLQQQGALKS---FIDECNALKSTRHRNI 447
+G GSFG VY+G D T VA+K + + +L+ F++E + +K ++
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTV--NESASLRERIEFLNEASVMKGFTCHHV 81
Query: 448 LRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHP--SPAEHYQFKKLSVIQRL-NIAI 504
+R++ S +V E M++G+L +L AE+ + +Q + +A
Sbjct: 82 VRLLGVVSK-----GQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 136
Query: 505 DVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVS 564
++A + YL+ H DL N ++ D T +GDFG+ + ++E +D K
Sbjct: 137 EIADGMAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYE-TDYYRK----- 187
Query: 565 IGLKG--SIGYIPPEHM-NGQVSILGDIYSYGILLLEM 599
G KG + ++ PE + +G + D++S+G++L E+
Sbjct: 188 -GGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 224
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 106/230 (46%), Gaps = 31/230 (13%)
Query: 389 DNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQ-QGALKSFIDECNALKSTRHRN 446
D++ + +IG+G+ V VAIK + L++ Q ++ + E A+ H N
Sbjct: 10 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 69
Query: 447 ILRVITACSSVDLEGNDFKALVFEFMSNGN-LDQWLH-PSPAEHYQFKKLSVIQRLNIAI 504
I+ T+ D LV + +S G+ LD H + EH K V+ IA
Sbjct: 70 IVSYYTS-----FVVKDELWLVMKLLSGGSVLDIIKHIVAKGEH----KSGVLDESTIAT 120
Query: 505 ---DVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLF---EISDNPS 558
+V L+YLH + H D+K N+LL +D + + DFG++ FL +I+ N
Sbjct: 121 ILREVLEGLEYLHKNGQI---HRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKV 177
Query: 559 KNQTVSIGLKGSIGYIPPEHMNGQV---SILGDIYSYGILLLEMFTGKRP 605
+ V G+ ++ PE M QV DI+S+GI +E+ TG P
Sbjct: 178 RKTFV-----GTPCWMAPEVME-QVRGYDFKADIWSFGITAIELATGAAP 221
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 101/227 (44%), Gaps = 34/227 (14%)
Query: 388 TDNFSKENLIGTGSFGSVY--KGTLGDGTIVAIKVL---KLQQQGALKSFIDECNALKST 442
+D + + ++G GSFG V K + G A+KV+ +++Q+ +S + E LK
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQL 83
Query: 443 RHRNILRVITACSSVDLEGNDFKALVFEFMSNGNL-DQWLHPSPAEHYQFKKLSVIQRLN 501
H NI ++ E + LV E + G L D+ + K+ S +
Sbjct: 84 DHPNIXKLYEF-----FEDKGYFYLVGEVYTGGELFDEIISR--------KRFSEVDAAR 130
Query: 502 IAIDVASALDYLHHHCDTPIAHCDLKPSNVLLD---KDMTAHVGDFGLAKFLFEISDNPS 558
I V S + Y H + I H DLKP N+LL+ KD + DFGL+ S
Sbjct: 131 IIRQVLSGITYXHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF-----EAS 182
Query: 559 KNQTVSIGLKGSIGYIPPEHMNGQVSILGDIYSYGILLLEMFTGKRP 605
K IG + YI PE ++G D++S G++L + +G P
Sbjct: 183 KKXKDKIG---TAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPP 226
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 120/258 (46%), Gaps = 34/258 (13%)
Query: 389 DNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKL--QQQGALKSFIDECNALKSTRHR 445
+NF K IG G++G VYK G +VA+ ++L + +G + I E + LK H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 446 NILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAID 505
NI++++ + E + LVFEF+ + +L +++ S L +I+ +
Sbjct: 63 NIVKLLDVIHT---ENKLY--LVFEFL-HQDLKKFMDASALTGI---PLPLIK--SYLFQ 111
Query: 506 VASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSI 565
+ L + H H + H DLKP N+L++ + + DFGLA+ F + ++ V
Sbjct: 112 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVV-- 165
Query: 566 GLKGSIGYIPPEHMNG--QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSI----HMF 619
++ Y PE + G S DI+S G + EM T + +F D I +F
Sbjct: 166 ----TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQLFRIF 217
Query: 620 VSMALPDHVMDILDPSMP 637
++ PD V+ SMP
Sbjct: 218 RTLGTPDEVVWPGVTSMP 235
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 120/258 (46%), Gaps = 34/258 (13%)
Query: 389 DNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKL--QQQGALKSFIDECNALKSTRHR 445
+NF K IG G++G VYK G +VA+ ++L + +G + I E + LK H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 446 NILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAID 505
NI++++ + E + LVFEF+ + +L +++ S L +I+ +
Sbjct: 62 NIVKLLDVIHT---ENKLY--LVFEFL-HQDLKKFMDASALTGI---PLPLIK--SYLFQ 110
Query: 506 VASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSI 565
+ L + H H + H DLKP N+L++ + + DFGLA+ F + ++ V
Sbjct: 111 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVV-- 164
Query: 566 GLKGSIGYIPPEHMNG--QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSI----HMF 619
++ Y PE + G S DI+S G + EM T + +F D I +F
Sbjct: 165 ----TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQLFRIF 216
Query: 620 VSMALPDHVMDILDPSMP 637
++ PD V+ SMP
Sbjct: 217 RTLGTPDEVVWPGVTSMP 234
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 106/230 (46%), Gaps = 31/230 (13%)
Query: 389 DNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQ-QGALKSFIDECNALKSTRHRN 446
D++ + +IG+G+ V VAIK + L++ Q ++ + E A+ H N
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 74
Query: 447 ILRVITACSSVDLEGNDFKALVFEFMSNGN-LDQWLH-PSPAEHYQFKKLSVIQRLNIAI 504
I+ T+ D LV + +S G+ LD H + EH K V+ IA
Sbjct: 75 IVSYYTS-----FVVKDELWLVMKLLSGGSVLDIIKHIVAKGEH----KSGVLDESTIAT 125
Query: 505 ---DVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLF---EISDNPS 558
+V L+YLH + H D+K N+LL +D + + DFG++ FL +I+ N
Sbjct: 126 ILREVLEGLEYLHKNGQI---HRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKV 182
Query: 559 KNQTVSIGLKGSIGYIPPEHMNGQV---SILGDIYSYGILLLEMFTGKRP 605
+ V G+ ++ PE M QV DI+S+GI +E+ TG P
Sbjct: 183 RKTFV-----GTPCWMAPEVME-QVRGYDFKADIWSFGITAIELATGAAP 226
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 106/218 (48%), Gaps = 32/218 (14%)
Query: 397 IGTGSFGSVYKGTLGD------GTIVAIKVLKLQQQGALKS---FIDECNALKSTRHRNI 447
+G GSFG VY+G D T VA+K + + +L+ F++E + +K ++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTV--NESASLRERIEFLNEASVMKGFTCHHV 82
Query: 448 LRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHP--SPAEHYQFKKLSVIQRL-NIAI 504
+R++ S +V E M++G+L +L AE+ + +Q + +A
Sbjct: 83 VRLLGVVSK-----GQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 137
Query: 505 DVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVS 564
++A + YL+ H DL N ++ D T +GDFG+ + ++E +D K
Sbjct: 138 EIADGMAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYE-TDYYRK----- 188
Query: 565 IGLKG--SIGYIPPEHM-NGQVSILGDIYSYGILLLEM 599
G KG + ++ PE + +G + D++S+G++L E+
Sbjct: 189 -GGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 110/258 (42%), Gaps = 39/258 (15%)
Query: 383 DISKSTDNFSKENLIGTGSFGSVYKGTLGD-GTIVAIKVLKLQQQGALKSFIDECNALKS 441
+I + ++FS +IG G FG VY D G + A+K L ++ +K E AL
Sbjct: 183 NIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKR---IKMKQGETLALNE 239
Query: 442 TRHRNILRVITA-------CSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKL 494
R +L +++ C S D + + + M+ G+L HY +
Sbjct: 240 ---RIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDL----------HYHLSQH 286
Query: 495 SVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEIS 554
V ++ A + L H + + + DLKP+N+LLD+ + D GLA
Sbjct: 287 GVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA------C 340
Query: 555 DNPSKNQTVSIGLKGSIGYIPPEHMNGQVSI--LGDIYSYGILLLEMFTGKRP-TGDMFK 611
D K S+ G+ GY+ PE + V+ D +S G +L ++ G P K
Sbjct: 341 DFSKKKPHASV---GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTK 397
Query: 612 DDFSI-HMFVSMA--LPD 626
D I M ++MA LPD
Sbjct: 398 DKHEIDRMTLTMAVELPD 415
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 88/188 (46%), Gaps = 9/188 (4%)
Query: 168 TGSIPVSLSNASNLQVLDFAENGLTGTIPGNFGSLKDLVRLNFDQNELGSREIGDLNFLK 227
+G+IP LS L LDF+ N L+GT+P + SL +LV + FD N + S I D ++
Sbjct: 114 SGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRI-SGAIPD-SYGS 171
Query: 228 FLANCTSLEVLGLARNSFGGEMPISIANLSTHLRRLTMGENLMHGNIPVXXXXXXXXXXX 287
F TS+ + +RN G++P + ANL +L + + N++ G+ V
Sbjct: 172 FSKLFTSMTI---SRNRLTGKIPPTFANL--NLAFVDLSRNMLEGDASVLFGSDKNTQKI 226
Query: 288 XXXXXXXXXSVPEVIGRLNKLEGLGLNVNKFSGLIPSSLGNLTILTRLWMEENRLEGSIP 347
+ +V G L GL L N+ G +P L L L L + N L G IP
Sbjct: 227 HLAKNSLAFDLGKV-GLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIP 285
Query: 348 PSLGNCQK 355
GN Q+
Sbjct: 286 QG-GNLQR 292
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 80/183 (43%), Gaps = 4/183 (2%)
Query: 15 LNLTYNYLSGKIPTNLSHCTELRSFEASVNDFVGQIPNQLSSLTKLEIIGLGGSNLTGNV 74
L +T+ +SG IP LS L + + S N G +P +SSL L I G+ ++G +
Sbjct: 106 LYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAI 165
Query: 75 PAWIGNFSSL-KALSLAWNNLRGSIPNELGQLSGLGFFTLYGNFXXXXXXXXXXXXXXXX 133
P G+FS L +++++ N L G IP L+ L F L N
Sbjct: 166 PDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQ 224
Query: 134 XXXVTQNQLHGQLPTDVGLTLPNLKIFAGAVNYFTGSIPVSLSNASNLQVLDFAENGLTG 193
+ +N L L VGL+ NL N G++P L+ L L+ + N L G
Sbjct: 225 KIHLAKNSLAFDL-GKVGLS-KNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCG 282
Query: 194 TIP 196
IP
Sbjct: 283 EIP 285
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 93/231 (40%), Gaps = 32/231 (13%)
Query: 20 NYLSGKIPTNLSHCTELRSFEASVNDFVGQIPNQLSSLTKLEIIGLGGSNLTGNVPAWIG 79
N L G IP ++ T+L + + G IP+ LS + L + + L+G +P I
Sbjct: 87 NNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSIS 146
Query: 80 NFSSLKALSLAWNNLRGSIPNELGQLSGLGFFTLYGNFXXXXXXXXXXXXXXXXXXXVTQ 139
+ +L ++ N + G+IP+ G S L FT +++
Sbjct: 147 SLPNLVGITFDGNRISGAIPDSYGSFSKL--FT---------------------SMTISR 183
Query: 140 NQLHGQLPTDVGLTLPNLKIFAGAVNYFTGSIPVSLSNASNLQVLDFAENGLTGTIPGNF 199
N+L G++P NL + N G V + N Q + A+N L + G
Sbjct: 184 NRLTGKIPPTFANL--NLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDL-GKV 240
Query: 200 GSLKDLVRLNFDQNELGSREIGDLNFLKFLANCTSLEVLGLARNSFGGEMP 250
G K+L L+ N + L LKF L L ++ N+ GE+P
Sbjct: 241 GLSKNLNGLDLRNNRIYGTLPQGLTQLKF------LHSLNVSFNNLCGEIP 285
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 26/53 (49%)
Query: 298 VPEVIGRLNKLEGLGLNVNKFSGLIPSSLGNLTILTRLWMEENRLEGSIPPSL 350
+P I +L +L L + SG IP L + L L N L G++PPS+
Sbjct: 93 IPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSI 145
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 110/258 (42%), Gaps = 39/258 (15%)
Query: 383 DISKSTDNFSKENLIGTGSFGSVYKGTLGD-GTIVAIKVLKLQQQGALKSFIDECNALKS 441
+I + ++FS +IG G FG VY D G + A+K L ++ +K E AL
Sbjct: 182 NIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKR---IKMKQGETLALNE 238
Query: 442 TRHRNILRVITA-------CSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKL 494
R +L +++ C S D + + + M+ G+L HY +
Sbjct: 239 ---RIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDL----------HYHLSQH 285
Query: 495 SVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEIS 554
V ++ A + L H + + + DLKP+N+LLD+ + D GLA
Sbjct: 286 GVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA------C 339
Query: 555 DNPSKNQTVSIGLKGSIGYIPPEHMNGQVSI--LGDIYSYGILLLEMFTGKRP-TGDMFK 611
D K S+ G+ GY+ PE + V+ D +S G +L ++ G P K
Sbjct: 340 DFSKKKPHASV---GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTK 396
Query: 612 DDFSI-HMFVSMA--LPD 626
D I M ++MA LPD
Sbjct: 397 DKHEIDRMTLTMAVELPD 414
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 104/218 (47%), Gaps = 32/218 (14%)
Query: 397 IGTGSFGSVYKGTLGD------GTIVAIKVLKLQQQGALKS---FIDECNALKSTRHRNI 447
+G GSFG VY+G D T VA+K + + +L+ F++E + +K ++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTV--NESASLRERIEFLNEASVMKGFTCHHV 82
Query: 448 LRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHP--SPAEHYQFKKLSVIQRL-NIAI 504
+R++ S +V E M++G+L +L AE+ + +Q + +A
Sbjct: 83 VRLLGVVSK-----GQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 137
Query: 505 DVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVS 564
++A + YL+ H DL N ++ D T +GDFG+ + ++E +
Sbjct: 138 EIADGMAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETA-------YYR 187
Query: 565 IGLKG--SIGYIPPEHM-NGQVSILGDIYSYGILLLEM 599
G KG + ++ PE + +G + D++S+G++L E+
Sbjct: 188 KGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 109/258 (42%), Gaps = 39/258 (15%)
Query: 383 DISKSTDNFSKENLIGTGSFGSVYKGTLGD-GTIVAIKVLKLQQQGALKSFIDECNALKS 441
+I + ++FS +IG G FG VY D G + A+K L + +K E AL
Sbjct: 183 NIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCL---DKKRIKMKQGETLALNE 239
Query: 442 TRHRNILRVIT-------ACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKL 494
R +L +++ C S D + + + M+ G+L HY +
Sbjct: 240 ---RIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDL----------HYHLSQH 286
Query: 495 SVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEIS 554
V ++ A + L H + + + DLKP+N+LLD+ + D GLA
Sbjct: 287 GVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA------C 340
Query: 555 DNPSKNQTVSIGLKGSIGYIPPEHMNGQVSI--LGDIYSYGILLLEMFTGKRP-TGDMFK 611
D K S+ G+ GY+ PE + V+ D +S G +L ++ G P K
Sbjct: 341 DFSKKKPHASV---GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTK 397
Query: 612 DDFSI-HMFVSMA--LPD 626
D I M ++MA LPD
Sbjct: 398 DKHEIDRMTLTMAVELPD 415
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 109/258 (42%), Gaps = 39/258 (15%)
Query: 383 DISKSTDNFSKENLIGTGSFGSVYKGTLGD-GTIVAIKVLKLQQQGALKSFIDECNALKS 441
+I + ++FS +IG G FG VY D G + A+K L + +K E AL
Sbjct: 183 NIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCL---DKKRIKMKQGETLALNE 239
Query: 442 TRHRNILRVIT-------ACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKL 494
R +L +++ C S D + + + M+ G+L HY +
Sbjct: 240 ---RIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDL----------HYHLSQH 286
Query: 495 SVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEIS 554
V ++ A + L H + + + DLKP+N+LLD+ + D GLA
Sbjct: 287 GVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA------C 340
Query: 555 DNPSKNQTVSIGLKGSIGYIPPEHMNGQVSI--LGDIYSYGILLLEMFTGKRP-TGDMFK 611
D K S+ G+ GY+ PE + V+ D +S G +L ++ G P K
Sbjct: 341 DFSKKKPHASV---GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTK 397
Query: 612 DDFSI-HMFVSMA--LPD 626
D I M ++MA LPD
Sbjct: 398 DKHEIDRMTLTMAVELPD 415
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 97/218 (44%), Gaps = 29/218 (13%)
Query: 397 IGTGSFGSVYKGT-LGDGTIVAIKVLKLQQQGA-LKSFIDECNALKSTRHRNILRVITAC 454
IGTG F V + G +VAIK++ G+ L E ALK+ RH++I ++
Sbjct: 18 IGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHV- 76
Query: 455 SSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLH 514
LE + +V E+ G L ++ +LS + + + SA+ Y+H
Sbjct: 77 ----LETANKIFMVLEYCPGGELFDYIISQ-------DRLSEEETRVVFRQIVSAVAYVH 125
Query: 515 HHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIG-LKGSIGY 573
AH DLKP N+L D+ + DFGL P N+ + GS+ Y
Sbjct: 126 ---SQGYAHRDLKPENLLFDEYHKLKLIDFGLCA-------KPKGNKDYHLQTCCGSLAY 175
Query: 574 IPPEHMNGQVSILG---DIYSYGILLLEMFTGKRPTGD 608
PE + G+ S LG D++S GILL + G P D
Sbjct: 176 AAPELIQGK-SYLGSEADVWSMGILLYVLMCGFLPFDD 212
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 102/243 (41%), Gaps = 50/243 (20%)
Query: 386 KSTDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQQGALKSFIDECNALKSTRH 444
+ +F + ++G G+FG V K D AIK ++ + L + + E L S H
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIR-HTEEKLSTILSEVMLLASLNH 61
Query: 445 RNILRVITACSSVDLEGNDF---------KALVF---EFMSNGNLDQWLHPSPAEHYQFK 492
+ ++R A LE +F K+ +F E+ NG L +H + +
Sbjct: 62 QYVVRYYAAW----LERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDE 117
Query: 493 KLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFE 552
+ ++ + AL Y+H I H DLKP N+ +D+ +GDFGLAK +
Sbjct: 118 YWRLFRQ------ILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHR 168
Query: 553 ISD----------NPSKNQTVSIGLKGSIGYIPPE------HMNGQVSILGDIYSYGILL 596
D S N T +I G+ Y+ E H N ++ D+YS GI+
Sbjct: 169 SLDILKLDSQNLPGSSDNLTSAI---GTAMYVATEVLDGTGHYNEKI----DMYSLGIIF 221
Query: 597 LEM 599
EM
Sbjct: 222 FEM 224
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 115/254 (45%), Gaps = 56/254 (22%)
Query: 405 VYKGTLGDGTIVAIKV---LKLQQQGALKSFID---------------ECNALKSTRHRN 446
+ + TLG+G+ +K+ K QQ+ ALK FI E + LK RH +
Sbjct: 12 IIRETLGEGSFGKVKLATHYKTQQKVALK-FISRQLLKKSDMHMRVEREISYLKLLRHPH 70
Query: 447 ILR---VITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIA 503
I++ VIT + + +V E+ + G L ++ + K+++ +
Sbjct: 71 IIKLYDVITTPTDI--------VMVIEY-AGGELFDYI-------VEKKRMTEDEGRRFF 114
Query: 504 IDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTV 563
+ A++Y H H I H DLKP N+LLD ++ + DFGL+ + N K
Sbjct: 115 QQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIM--TDGNFLKTSC- 168
Query: 564 SIGLKGSIGYIPPEHMNGQVSI--LGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVS 621
GS Y PE +NG++ D++S GI+L M G+ P F D+F ++F
Sbjct: 169 -----GSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLP----FDDEFIPNLFKK 219
Query: 622 MALPDHVM-DILDP 634
+ +VM D L P
Sbjct: 220 VNSCVYVMPDFLSP 233
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 118/243 (48%), Gaps = 38/243 (15%)
Query: 395 NLIGTGSFGSVYKGTLGDGT----IVAIKVLKLQQQGALKSFIDECNALKSTRHRNILR- 449
++G GSFG V+ G+ + A+KVLK K+ + + +++ R+IL
Sbjct: 30 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLK-------KATLKVRDRVRTKMERDILVE 82
Query: 450 -----VITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAI 504
++ + EG + L+ +F+ G+L L ++ F + V + +A
Sbjct: 83 VNHPFIVKLHYAFQTEGKLY--LILDFLRGGDLFTRL----SKEVMFTEEDV--KFYLA- 133
Query: 505 DVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVS 564
++A ALD+LH I + DLKP N+LLD++ + DFGL+K E D+ K +
Sbjct: 134 ELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSK---ESIDHEKKAYSFC 187
Query: 565 IGLKGSIGYIPPEHMNGQVSIL-GDIYSYGILLLEMFTGKRP-TGDMFKDDFSIHMFVSM 622
G++ Y+ PE +N + D +S+G+L+ EM TG P G K+ ++ + +
Sbjct: 188 ----GTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKL 243
Query: 623 ALP 625
+P
Sbjct: 244 GMP 246
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 106/227 (46%), Gaps = 38/227 (16%)
Query: 394 ENLIGTGSFGSVYKGTL-GDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRVIT 452
E IG G FG V+KG L D ++VAIK L L I++ + R I+ +
Sbjct: 24 EKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQ--REVFIMSNLN 81
Query: 453 ACSSVDLEG--NDFKALVFEFMSNGNLDQWL----HPSPAEHYQFKKLSVIQRLNIAIDV 506
+ V L G ++ +V EF+ G+L L HP K SV +L + +D+
Sbjct: 82 HPNIVKLYGLMHNPPRMVMEFVPCGDLYHRLLDKAHPI--------KWSV--KLRLMLDI 131
Query: 507 ASALDYLHHHCDTPIAHCDLKPSNVLL-----DKDMTAHVGDFGLAKFLFEISDNPSKNQ 561
A ++Y+ + + PI H DL+ N+ L + + A V DFGL++
Sbjct: 132 ALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ---------QSVH 181
Query: 562 TVSIGLKGSIGYIPPEHMNGQ---VSILGDIYSYGILLLEMFTGKRP 605
+VS GL G+ ++ PE + + + D YS+ ++L + TG+ P
Sbjct: 182 SVS-GLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGP 227
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 108/234 (46%), Gaps = 33/234 (14%)
Query: 382 SDISKSTDNFSKENLIGTGSFGSVYKGTL---GDGTIVAIKVLKLQQQGALKSF---IDE 435
+ I K T+ K ++G+G FG+V+KG G+ + + + ++ + +SF D
Sbjct: 25 ARIFKETE-LRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDH 83
Query: 436 CNALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLS 495
A+ S H +I+R++ C L+ LV +++ G+L +H + + +
Sbjct: 84 MLAIGSLDHAHIVRLLGLCPGSSLQ------LVTQYLPLGSL--------LDHVRQHRGA 129
Query: 496 VIQRL--NIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEI 553
+ +L N + +A + YL H + H +L NVLL V DFG+A L
Sbjct: 130 LGPQLLLNWGVQIAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLL--- 183
Query: 554 SDNPSKNQTVSIGLKGSIGYIPPEHMN-GQVSILGDIYSYGILLLEMFT-GKRP 605
P Q + K I ++ E ++ G+ + D++SYG+ + E+ T G P
Sbjct: 184 --PPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEP 235
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 119/243 (48%), Gaps = 38/243 (15%)
Query: 395 NLIGTGSFGSVYKGTLGDGT----IVAIKVLKLQQQGALKSFIDECNALKSTRHRNILR- 449
++G GSFG V+ G+ + A+KVLK K+ + + +++ R+IL
Sbjct: 31 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLK-------KATLKVRDRVRTKMERDILVE 83
Query: 450 -----VITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAI 504
++ + EG + L+ +F+ G+L L ++ F + V + +A
Sbjct: 84 VNHPFIVKLHYAFQTEGKLY--LILDFLRGGDLFTRL----SKEVMFTEEDV--KFYLA- 134
Query: 505 DVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVS 564
++A ALD+LH I + DLKP N+LLD++ + DFGL+K E D+ K +
Sbjct: 135 ELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSK---ESIDHEKKAYSFC 188
Query: 565 IGLKGSIGYIPPEHMNGQ-VSILGDIYSYGILLLEMFTGKRP-TGDMFKDDFSIHMFVSM 622
G++ Y+ PE +N + + D +S+G+L+ EM TG P G K+ ++ + +
Sbjct: 189 ----GTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKL 244
Query: 623 ALP 625
+P
Sbjct: 245 GMP 247
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 108/234 (46%), Gaps = 33/234 (14%)
Query: 382 SDISKSTDNFSKENLIGTGSFGSVYKGTL---GDGTIVAIKVLKLQQQGALKSF---IDE 435
+ I K T+ K ++G+G FG+V+KG G+ + + + ++ + +SF D
Sbjct: 7 ARIFKETE-LRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDH 65
Query: 436 CNALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLS 495
A+ S H +I+R++ C L+ LV +++ G+L +H + + +
Sbjct: 66 MLAIGSLDHAHIVRLLGLCPGSSLQ------LVTQYLPLGSL--------LDHVRQHRGA 111
Query: 496 VIQRL--NIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEI 553
+ +L N + +A + YL H + H +L NVLL V DFG+A L
Sbjct: 112 LGPQLLLNWGVQIAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLL--- 165
Query: 554 SDNPSKNQTVSIGLKGSIGYIPPEHMN-GQVSILGDIYSYGILLLEMFT-GKRP 605
P Q + K I ++ E ++ G+ + D++SYG+ + E+ T G P
Sbjct: 166 --PPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEP 217
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 108/230 (46%), Gaps = 29/230 (12%)
Query: 384 ISKSTDNFSKENLIGTGSFGSVYKGTL---GDGTIVAIKVLKLQQQ---GALKSFIDECN 437
I K T+ F K ++G+G+FG+VYKG G+ + + + +L++ A K +DE
Sbjct: 13 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 71
Query: 438 ALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVI 497
+ S + ++ R++ C + ++ L+ + M G L ++ EH +
Sbjct: 72 VMASVDNPHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYVR----EHKD--NIGSQ 119
Query: 498 QRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNP 557
LN + +A ++YL D + H DL NVL+ + DFG AK L
Sbjct: 120 YLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLL-----GA 171
Query: 558 SKNQTVSIGLKGSIGYIPPEHMNGQV-SILGDIYSYGILLLEMFT-GKRP 605
+ + + G K I ++ E + ++ + D++SYG+ + E+ T G +P
Sbjct: 172 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 221
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 110/222 (49%), Gaps = 37/222 (16%)
Query: 395 NLIGTGSFGSVYKGTLGDGT----IVAIKVLKLQQQGALKSFIDECNALKSTRHRNILR- 449
++G GSFG V+ G+ + A+KVLK K+ + + +++ R+IL
Sbjct: 30 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLK-------KATLKVRDRVRTKMERDILVE 82
Query: 450 -----VITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAI 504
++ + EG + L+ +F+ G+L L ++ F + V + +A
Sbjct: 83 VNHPFIVKLHYAFQTEGKLY--LILDFLRGGDLFTRL----SKEVMFTEEDV--KFYLA- 133
Query: 505 DVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVS 564
++A ALD+LH I + DLKP N+LLD++ + DFGL+K E D+ K +
Sbjct: 134 ELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSK---ESIDHEKKAYSFC 187
Query: 565 IGLKGSIGYIPPEHMNGQ-VSILGDIYSYGILLLEMFTGKRP 605
G++ Y+ PE +N + + D +S+G+L+ EM TG P
Sbjct: 188 ----GTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLP 225
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 108/230 (46%), Gaps = 29/230 (12%)
Query: 384 ISKSTDNFSKENLIGTGSFGSVYKGTL---GDGTIVAIKVLKLQQQ---GALKSFIDECN 437
I K T+ F K ++G+G+FG+VYKG G+ + + + +L++ A K +DE
Sbjct: 13 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 71
Query: 438 ALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVI 497
+ S + ++ R++ C + ++ L+ + M G L ++ EH +
Sbjct: 72 VMASVDNPHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYVR----EHKD--NIGSQ 119
Query: 498 QRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNP 557
LN + +A ++YL D + H DL NVL+ + DFG AK L
Sbjct: 120 YLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLL-----GA 171
Query: 558 SKNQTVSIGLKGSIGYIPPEHMNGQV-SILGDIYSYGILLLEMFT-GKRP 605
+ + + G K I ++ E + ++ + D++SYG+ + E+ T G +P
Sbjct: 172 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 221
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 108/230 (46%), Gaps = 29/230 (12%)
Query: 384 ISKSTDNFSKENLIGTGSFGSVYKGTL---GDGTIVAIKVLKLQQQ---GALKSFIDECN 437
I K T+ F K ++G+G+FG+VYKG G+ + + + +L++ A K +DE
Sbjct: 15 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 73
Query: 438 ALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVI 497
+ S + ++ R++ C + ++ L+ + M G L ++ EH +
Sbjct: 74 VMASVDNPHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYVR----EHKD--NIGSQ 121
Query: 498 QRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNP 557
LN + +A ++YL D + H DL NVL+ + DFG AK L
Sbjct: 122 YLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLL-----GA 173
Query: 558 SKNQTVSIGLKGSIGYIPPEHMNGQV-SILGDIYSYGILLLEMFT-GKRP 605
+ + + G K I ++ E + ++ + D++SYG+ + E+ T G +P
Sbjct: 174 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 223
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 91/217 (41%), Gaps = 35/217 (16%)
Query: 397 IGTGSFGSV----YKGT-LGDGTIVAIKVLKL----QQQGALKSFIDECNALKSTRHRNI 447
+G G FG V Y T G G +VA+K LK Q + K ID L++ H +I
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEID---ILRTLYHEHI 78
Query: 448 LRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVA 507
++ C +G LV E++ G+L +L H + + Q L A +
Sbjct: 79 IKYKGCCED---QGEKSLQLVMEYVPLGSLRDYL----PRH----SIGLAQLLLFAQQIC 127
Query: 508 SALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGL 567
+ YLH H +L NVLLD D +GDFGLAK + P ++ +
Sbjct: 128 EGMAYLH---SQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAV------PEGHEYYRVRE 178
Query: 568 KGS---IGYIPPEHMNGQVSILGDIYSYGILLLEMFT 601
G Y P + D++S+G+ L E+ T
Sbjct: 179 DGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 105/218 (48%), Gaps = 32/218 (14%)
Query: 397 IGTGSFGSVYKGTLGD------GTIVAIKVLKLQQQGALKS---FIDECNALKSTRHRNI 447
+G GSFG VY+G D T VA+K + + +L+ F++E + +K ++
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTV--NESASLRERIEFLNEASVMKGFTCHHV 79
Query: 448 LRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHP--SPAEHYQFKKLSVIQRL-NIAI 504
+R++ S +V E M++G+L +L AE+ + +Q + +A
Sbjct: 80 VRLLGVVSK-----GQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 134
Query: 505 DVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVS 564
++A + YL+ H DL N ++ D T +GDFG+ + + E +D K
Sbjct: 135 EIADGMAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXE-TDXXRK----- 185
Query: 565 IGLKG--SIGYIPPEHM-NGQVSILGDIYSYGILLLEM 599
G KG + ++ PE + +G + D++S+G++L E+
Sbjct: 186 -GGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 222
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 105/218 (48%), Gaps = 32/218 (14%)
Query: 397 IGTGSFGSVYKGTLGD------GTIVAIKVLKLQQQGALKS---FIDECNALKSTRHRNI 447
+G GSFG VY+G D T VA+K + + +L+ F++E + +K ++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTV--NESASLRERIEFLNEASVMKGFTCHHV 82
Query: 448 LRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHP--SPAEHYQFKKLSVIQRL-NIAI 504
+R++ S +V E M++G+L +L AE+ + +Q + +A
Sbjct: 83 VRLLGVVSK-----GQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 137
Query: 505 DVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVS 564
++A + YL+ H DL N ++ D T +GDFG+ + + E +D K
Sbjct: 138 EIADGMAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXE-TDXXRK----- 188
Query: 565 IGLKG--SIGYIPPEHM-NGQVSILGDIYSYGILLLEM 599
G KG + ++ PE + +G + D++S+G++L E+
Sbjct: 189 -GGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 88/211 (41%), Gaps = 23/211 (10%)
Query: 397 IGTGSFGSV----YKGT-LGDGTIVAIKVLKLQQQGALKS-FIDECNALKSTRHRNILRV 450
+G G FG V Y T G G +VA+K LK +S + E + L++ H +I++
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKY 98
Query: 451 ITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASAL 510
C G LV E++ G+L +L H + + Q L A + +
Sbjct: 99 KGCCEDA---GAASLQLVMEYVPLGSLRDYL----PRH----SIGLAQLLLFAQQICEGM 147
Query: 511 DYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGS 570
YLH H DL NVLLD D +GDFGLAK + + + G
Sbjct: 148 AYLH---AQHYIHRDLAARNVLLDNDRLVKIGDFGLAK---AVPEGHEXYRVREDGDSPV 201
Query: 571 IGYIPPEHMNGQVSILGDIYSYGILLLEMFT 601
Y P + D++S+G+ L E+ T
Sbjct: 202 FWYAPECLKEYKFYYASDVWSFGVTLYELLT 232
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 105/218 (48%), Gaps = 32/218 (14%)
Query: 397 IGTGSFGSVYKGTLGD------GTIVAIKVLKLQQQGALKS---FIDECNALKSTRHRNI 447
+G GSFG VY+G D T VA+K + + +L+ F++E + +K ++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTV--NESASLRERIEFLNEASVMKGFTCHHV 82
Query: 448 LRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHP--SPAEHYQFKKLSVIQRL-NIAI 504
+R++ S +V E M++G+L +L AE+ + +Q + +A
Sbjct: 83 VRLLGVVSK-----GQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 137
Query: 505 DVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVS 564
++A + YL+ H DL N ++ D T +GDFG+ + + E +D K
Sbjct: 138 EIADGMAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXE-TDXXRK----- 188
Query: 565 IGLKG--SIGYIPPEHM-NGQVSILGDIYSYGILLLEM 599
G KG + ++ PE + +G + D++S+G++L E+
Sbjct: 189 -GGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 108/230 (46%), Gaps = 29/230 (12%)
Query: 384 ISKSTDNFSKENLIGTGSFGSVYKGTL---GDGTIVAIKVLKLQQQ---GALKSFIDECN 437
I K T+ F K ++ +G+FG+VYKG G+ + + + +L++ A K +DE
Sbjct: 18 ILKETE-FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 76
Query: 438 ALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVI 497
+ S + ++ R++ C + ++ L+ + M G L ++ EH +
Sbjct: 77 VMASVDNPHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYVR----EHKD--NIGSQ 124
Query: 498 QRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNP 557
LN + +A ++YL D + H DL NVL+ + DFGLAK L
Sbjct: 125 YLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL-----GA 176
Query: 558 SKNQTVSIGLKGSIGYIPPEHMNGQV-SILGDIYSYGILLLEMFT-GKRP 605
+ + + G K I ++ E + ++ + D++SYG+ + E+ T G +P
Sbjct: 177 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 226
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 103/222 (46%), Gaps = 26/222 (11%)
Query: 389 DNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQQGALK-SFIDECNALKSTRHRN 446
D+F K + +G G+ G V+K + G ++A K++ L+ + A++ I E L
Sbjct: 25 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 84
Query: 447 ILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDV 506
I+ A S + ++ E M G+LDQ L + Q ++ +++IA V
Sbjct: 85 IVGFYGAFYS-----DGEISICMEHMDGGSLDQVLKKAGRIPEQ-----ILGKVSIA--V 132
Query: 507 ASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIG 566
L YL I H D+KPSN+L++ + DFG++ L + N
Sbjct: 133 IKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN---------S 181
Query: 567 LKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRPTG 607
G+ Y+ PE + G S+ DI+S G+ L+EM G+ P G
Sbjct: 182 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIG 223
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 109/233 (46%), Gaps = 18/233 (7%)
Query: 382 SDISKSTDNFSKENLIGTGSFGSVYKGTLG--DGTIV--AIKVLK--LQQQGALKSFIDE 435
D+ F+ ++G G FGSV + L DG+ V A+K+LK + ++ F+ E
Sbjct: 16 EDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLRE 75
Query: 436 CNALKSTRHRNILRVITACSSVDLEGN-DFKALVFEFMSNGNLDQWLHPSPAEHYQFKKL 494
+K H ++ +++ +G ++ FM +G+L +L S F L
Sbjct: 76 AACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFN-L 134
Query: 495 SVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEIS 554
+ + +D+A ++YL H DL N +L +DMT V DFGL++ ++ S
Sbjct: 135 PLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTVCVADFGLSRKIY--S 189
Query: 555 DNPSKNQTVSIGLKGSIGYIPPEHMNGQV-SILGDIYSYGILLLEMFT-GKRP 605
+ + S K + ++ E + + ++ D++++G+ + E+ T G+ P
Sbjct: 190 GDYYRQGCAS---KLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTP 239
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 105/231 (45%), Gaps = 45/231 (19%)
Query: 397 IGTGSFGSVY--------KGTLGDGTIVAIKVLKLQQ-QGALKSFIDECNALKST-RHRN 446
+G G+FG V K + VA+K+LK + L + E +K +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 447 ILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPS--------------PAEHYQFK 492
I+ ++ AC+ +G + ++ E+ S GNL ++L P E FK
Sbjct: 103 IINLLGACTQ---DGPLY--VIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFK 157
Query: 493 KLSVIQRLNIAIDVASALDYL-HHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLF 551
L ++ +A ++YL C H DL NVL+ ++ + DFGLA+ +
Sbjct: 158 DL-----VSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDIN 208
Query: 552 EISDNPSKNQTVSIGLKGSIGYIPPEHMNGQV-SILGDIYSYGILLLEMFT 601
I D K + +K ++ PE + +V + D++S+G+L+ E+FT
Sbjct: 209 NI-DXXKKTTNGRLPVK----WMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 105/247 (42%), Gaps = 53/247 (21%)
Query: 390 NFSKENLI-----GTGSFGSVYKGTL------GDGTIVAIKVLKLQQQGA-LKSFIDECN 437
F ++NL+ G G FG V K T T VA+K+LK + L+ + E N
Sbjct: 19 EFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFN 78
Query: 438 ALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPA----------- 486
LK H +++++ ACS + L+ E+ G+L +L S
Sbjct: 79 VLKQVNHPHVIKLYGACSQ-----DGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGS 133
Query: 487 ------EHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAH 540
+H + L++ ++ A ++ + YL + + H DL N+L+ +
Sbjct: 134 RNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMK 190
Query: 541 VGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNGQ------VSILGDIYSYGI 594
+ DFGL++ ++E ++Q G IP + M + + D++S+G+
Sbjct: 191 ISDFGLSRDVYEEDSXVKRSQ----------GRIPVKWMAIESLFDHIYTTQSDVWSFGV 240
Query: 595 LLLEMFT 601
LL E+ T
Sbjct: 241 LLWEIVT 247
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 101/231 (43%), Gaps = 35/231 (15%)
Query: 385 SKSTDNFSKENLIGTGSFGSVY-KGTLGDGTIVAIKVLKLQQQGALKSFIDECNALKSTR 443
K ++F ++G GSF +V L AIK+L+ + I E TR
Sbjct: 6 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRH------IIKENKVPYVTR 59
Query: 444 HRNILRVITACSSVDL--EGNDFKALVF--EFMSNGNLDQWLHPSPAEHYQFKKL----S 495
R+++ + V L D + L F + NG L +++ +K+
Sbjct: 60 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI----------RKIGSFDE 109
Query: 496 VIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISD 555
R A ++ SAL+YLH I H DLKP N+LL++DM + DFG AK L
Sbjct: 110 TCTRFYTA-EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVL----- 160
Query: 556 NPSKNQTVSIGLKGSIGYIPPEHMNGQVSIL-GDIYSYGILLLEMFTGKRP 605
+P Q + G+ Y+ PE + + + D+++ G ++ ++ G P
Sbjct: 161 SPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 211
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 105/231 (45%), Gaps = 45/231 (19%)
Query: 397 IGTGSFGSVY--------KGTLGDGTIVAIKVLKLQQ-QGALKSFIDECNALKST-RHRN 446
+G G+FG V K + VA+K+LK + L + E +K +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 447 ILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPS--------------PAEHYQFK 492
I+ ++ AC+ +G + ++ E+ S GNL ++L P E FK
Sbjct: 103 IINLLGACTQ---DGPLY--VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 493 KLSVIQRLNIAIDVASALDYL-HHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLF 551
L ++ +A ++YL C H DL NVL+ ++ + DFGLA+ +
Sbjct: 158 DL-----VSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDIN 208
Query: 552 EISDNPSKNQTVSIGLKGSIGYIPPEHMNGQV-SILGDIYSYGILLLEMFT 601
I D K + +K ++ PE + +V + D++S+G+L+ E+FT
Sbjct: 209 NI-DXXKKTTNGRLPVK----WMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 101/231 (43%), Gaps = 35/231 (15%)
Query: 385 SKSTDNFSKENLIGTGSFGSVY-KGTLGDGTIVAIKVLKLQQQGALKSFIDECNALKSTR 443
K ++F ++G GSF +V L AIK+L+ + I E TR
Sbjct: 5 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRH------IIKENKVPYVTR 58
Query: 444 HRNILRVITACSSVDL--EGNDFKALVF--EFMSNGNLDQWLHPSPAEHYQFKKL----S 495
R+++ + V L D + L F + NG L +++ +K+
Sbjct: 59 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI----------RKIGSFDE 108
Query: 496 VIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISD 555
R A ++ SAL+YLH I H DLKP N+LL++DM + DFG AK L
Sbjct: 109 TCTRFYTA-EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVL----- 159
Query: 556 NPSKNQTVSIGLKGSIGYIPPEHMNGQVSIL-GDIYSYGILLLEMFTGKRP 605
+P Q + G+ Y+ PE + + + D+++ G ++ ++ G P
Sbjct: 160 SPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 210
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 105/247 (42%), Gaps = 53/247 (21%)
Query: 390 NFSKENLI-----GTGSFGSVYKGTL------GDGTIVAIKVLKLQQQGA-LKSFIDECN 437
F ++NL+ G G FG V K T T VA+K+LK + L+ + E N
Sbjct: 19 EFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFN 78
Query: 438 ALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPA----------- 486
LK H +++++ ACS + L+ E+ G+L +L S
Sbjct: 79 VLKQVNHPHVIKLYGACSQ-----DGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGS 133
Query: 487 ------EHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAH 540
+H + L++ ++ A ++ + YL + + H DL N+L+ +
Sbjct: 134 RNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMSLVHRDLAARNILVAEGRKMK 190
Query: 541 VGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNGQ------VSILGDIYSYGI 594
+ DFGL++ ++E ++Q G IP + M + + D++S+G+
Sbjct: 191 ISDFGLSRDVYEEDSXVKRSQ----------GRIPVKWMAIESLFDHIYTTQSDVWSFGV 240
Query: 595 LLLEMFT 601
LL E+ T
Sbjct: 241 LLWEIVT 247
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 101/231 (43%), Gaps = 35/231 (15%)
Query: 385 SKSTDNFSKENLIGTGSFGSVY-KGTLGDGTIVAIKVLKLQQQGALKSFIDECNALKSTR 443
K ++F ++G GSF +V L AIK+L+ + I E TR
Sbjct: 3 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRH------IIKENKVPYVTR 56
Query: 444 HRNILRVITACSSVDL--EGNDFKALVF--EFMSNGNLDQWLHPSPAEHYQFKKL----S 495
R+++ + V L D + L F + NG L +++ +K+
Sbjct: 57 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI----------RKIGSFDE 106
Query: 496 VIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISD 555
R A ++ SAL+YLH I H DLKP N+LL++DM + DFG AK L
Sbjct: 107 TCTRFYTA-EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVL----- 157
Query: 556 NPSKNQTVSIGLKGSIGYIPPEHMNGQVSIL-GDIYSYGILLLEMFTGKRP 605
+P Q + G+ Y+ PE + + + D+++ G ++ ++ G P
Sbjct: 158 SPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 208
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 91/217 (41%), Gaps = 35/217 (16%)
Query: 397 IGTGSFGSV----YKGT-LGDGTIVAIKVLKL----QQQGALKSFIDECNALKSTRHRNI 447
+G G FG V Y T G G +VA+K LK Q + K ID L++ H +I
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEID---ILRTLYHEHI 78
Query: 448 LRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVA 507
++ C +G LV E++ G+L +L H + + Q L A +
Sbjct: 79 IKYKGCCED---QGEKSLQLVMEYVPLGSLRDYL----PRH----SIGLAQLLLFAQQIC 127
Query: 508 SALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGL 567
+ YLH H +L NVLLD D +GDFGLAK + P ++ +
Sbjct: 128 EGMAYLH---AQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAV------PEGHEYYRVRE 178
Query: 568 KGS---IGYIPPEHMNGQVSILGDIYSYGILLLEMFT 601
G Y P + D++S+G+ L E+ T
Sbjct: 179 DGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 101/231 (43%), Gaps = 35/231 (15%)
Query: 385 SKSTDNFSKENLIGTGSFGSVY-KGTLGDGTIVAIKVLKLQQQGALKSFIDECNALKSTR 443
K ++F ++G GSF +V L AIK+L+ + I E TR
Sbjct: 4 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRH------IIKENKVPYVTR 57
Query: 444 HRNILRVITACSSVDL--EGNDFKALVF--EFMSNGNLDQWLHPSPAEHYQFKKL----S 495
R+++ + V L D + L F + NG L +++ +K+
Sbjct: 58 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI----------RKIGSFDE 107
Query: 496 VIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISD 555
R A ++ SAL+YLH I H DLKP N+LL++DM + DFG AK L
Sbjct: 108 TCTRFYTA-EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVL----- 158
Query: 556 NPSKNQTVSIGLKGSIGYIPPEHMNGQVSIL-GDIYSYGILLLEMFTGKRP 605
+P Q + G+ Y+ PE + + + D+++ G ++ ++ G P
Sbjct: 159 SPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 209
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 105/247 (42%), Gaps = 53/247 (21%)
Query: 390 NFSKENLI-----GTGSFGSVYKGTL------GDGTIVAIKVLKLQQQGA-LKSFIDECN 437
F ++NL+ G G FG V K T T VA+K+LK + L+ + E N
Sbjct: 19 EFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFN 78
Query: 438 ALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPA----------- 486
LK H +++++ ACS + L+ E+ G+L +L S
Sbjct: 79 VLKQVNHPHVIKLYGACSQ-----DGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGS 133
Query: 487 ------EHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAH 540
+H + L++ ++ A ++ + YL + + H DL N+L+ +
Sbjct: 134 RNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMK 190
Query: 541 VGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNGQ------VSILGDIYSYGI 594
+ DFGL++ ++E ++Q G IP + M + + D++S+G+
Sbjct: 191 ISDFGLSRDVYEEDSYVKRSQ----------GRIPVKWMAIESLFDHIYTTQSDVWSFGV 240
Query: 595 LLLEMFT 601
LL E+ T
Sbjct: 241 LLWEIVT 247
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 108/230 (46%), Gaps = 29/230 (12%)
Query: 384 ISKSTDNFSKENLIGTGSFGSVYKGTL---GDGTIVAIKVLKLQQQ---GALKSFIDECN 437
I K T+ F K ++G+G+FG+VYKG G+ + + + +L++ A K +DE
Sbjct: 13 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 71
Query: 438 ALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVI 497
+ S + ++ R++ C + ++ L+ + M G L ++ EH +
Sbjct: 72 VMASVDNPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVR----EHKD--NIGSQ 119
Query: 498 QRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNP 557
LN + +A ++YL D + H DL NVL+ + DFG AK L
Sbjct: 120 YLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLL-----GA 171
Query: 558 SKNQTVSIGLKGSIGYIPPEHMNGQV-SILGDIYSYGILLLEMFT-GKRP 605
+ + + G K I ++ E + ++ + D++SYG+ + E+ T G +P
Sbjct: 172 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 221
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 94/215 (43%), Gaps = 25/215 (11%)
Query: 397 IGTGSFGSVYKGT--LGDGTIVAIKVLKLQ--QQGALKSFIDECNALK---STRHRNILR 449
IG G++G V+K G VA+K +++Q ++G S I E L+ + H N++R
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 450 VITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASA 509
+ C+ + LVFE + + +L +L P + + ++ +
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIK-----DMMFQLLRG 132
Query: 510 LDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKG 569
LD+LH H + H DLKP N+L+ + DFGLA+ Q +
Sbjct: 133 LDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIY--------SFQMALTSVVV 181
Query: 570 SIGYIPPEH-MNGQVSILGDIYSYGILLLEMFTGK 603
++ Y PE + + D++S G + EMF K
Sbjct: 182 TLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 108/230 (46%), Gaps = 29/230 (12%)
Query: 384 ISKSTDNFSKENLIGTGSFGSVYKGTL---GDGTIVAIKVLKLQQQ---GALKSFIDECN 437
I K T+ F K ++G+G+FG+VYKG G+ + + + +L++ A K +DE
Sbjct: 18 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 76
Query: 438 ALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVI 497
+ S + ++ R++ C + ++ L+ + M G L ++ EH +
Sbjct: 77 VMASVDNPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVR----EHKD--NIGSQ 124
Query: 498 QRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNP 557
LN + +A ++YL D + H DL NVL+ + DFG AK L
Sbjct: 125 YLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLL-----GA 176
Query: 558 SKNQTVSIGLKGSIGYIPPEHMNGQV-SILGDIYSYGILLLEMFT-GKRP 605
+ + + G K I ++ E + ++ + D++SYG+ + E+ T G +P
Sbjct: 177 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 226
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 108/226 (47%), Gaps = 35/226 (15%)
Query: 397 IGTGSFGSVY--------KGTLGDGTIVAIKVLKLQQ-QGALKSFIDECNALKST-RHRN 446
+G G+FG V K + VA+K+LK + L + E +K +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 447 ILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPS--PAEHYQF-------KKLSVI 497
I+ ++ AC+ +G + ++ E+ S GNL ++L P Y + ++++
Sbjct: 103 IINLLGACTQ---DGPLY--VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 498 QRLNIAIDVASALDYL-HHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDN 556
++ +A ++YL C H DL NVL+ ++ + DFGLA+ + I +
Sbjct: 158 DLVSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDINNI--D 211
Query: 557 PSKNQTVSIGLKGSIGYIPPEHMNGQV-SILGDIYSYGILLLEMFT 601
KN T + + ++ PE + +V + D++S+G+L+ E+FT
Sbjct: 212 YYKNTTNG---RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 108/230 (46%), Gaps = 29/230 (12%)
Query: 384 ISKSTDNFSKENLIGTGSFGSVYKGTL---GDGTIVAIKVLKLQQQ---GALKSFIDECN 437
I K T+ F K ++G+G+FG+VYKG G+ + + + +L++ A K +DE
Sbjct: 11 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 69
Query: 438 ALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVI 497
+ S + ++ R++ C + ++ L+ + M G L ++ EH +
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVR----EHKD--NIGSQ 117
Query: 498 QRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNP 557
LN + +A ++YL D + H DL NVL+ + DFG AK L
Sbjct: 118 YLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLL-----GA 169
Query: 558 SKNQTVSIGLKGSIGYIPPEHMNGQV-SILGDIYSYGILLLEMFT-GKRP 605
+ + + G K I ++ E + ++ + D++SYG+ + E+ T G +P
Sbjct: 170 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 107/231 (46%), Gaps = 45/231 (19%)
Query: 397 IGTGSFGSVY--------KGTLGDGTIVAIKVLKLQQ-QGALKSFIDECNALKST-RHRN 446
+G G+FG V K + VA+K+LK + L + E +K +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 447 ILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPS--------------PAEHYQFK 492
I+ ++ AC+ +G + ++ E+ S GNL ++L P E FK
Sbjct: 103 IINLLGACTQ---DGPLY--VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 493 KLSVIQRLNIAIDVASALDYL-HHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLF 551
L ++ +A ++YL C H DL NVL+ ++ + DFGLA+
Sbjct: 158 DL-----VSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMRIADFGLAR--- 205
Query: 552 EISDNPSKNQTVSIGLKGSIGYIPPEHMNGQV-SILGDIYSYGILLLEMFT 601
+I++ +T + L + ++ PE + +V + D++S+G+L+ E+FT
Sbjct: 206 DINNIDYYKKTTNGRL--PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 108/230 (46%), Gaps = 29/230 (12%)
Query: 384 ISKSTDNFSKENLIGTGSFGSVYKGTL---GDGTIVAIKVLKLQQQ---GALKSFIDECN 437
I K T+ F K ++ +G+FG+VYKG G+ + + + +L++ A K +DE
Sbjct: 11 ILKETE-FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 69
Query: 438 ALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVI 497
+ S + ++ R++ C + ++ L+ + M G L ++ EH +
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVR----EHKD--NIGSQ 117
Query: 498 QRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNP 557
LN + +A ++YL D + H DL NVL+ + DFGLAK L
Sbjct: 118 YLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL-----GA 169
Query: 558 SKNQTVSIGLKGSIGYIPPEHMNGQV-SILGDIYSYGILLLEMFT-GKRP 605
+ + + G K I ++ E + ++ + D++SYG+ + E+ T G +P
Sbjct: 170 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 108/230 (46%), Gaps = 29/230 (12%)
Query: 384 ISKSTDNFSKENLIGTGSFGSVYKGTL---GDGTIVAIKVLKLQQQ---GALKSFIDECN 437
I K T+ F K ++ +G+FG+VYKG G+ + + + +L++ A K +DE
Sbjct: 18 ILKETE-FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 76
Query: 438 ALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVI 497
+ S + ++ R++ C + ++ L+ + M G L ++ EH +
Sbjct: 77 VMASVDNPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVR----EHKD--NIGSQ 124
Query: 498 QRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNP 557
LN + +A ++YL D + H DL NVL+ + DFGLAK L
Sbjct: 125 YLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL-----GA 176
Query: 558 SKNQTVSIGLKGSIGYIPPEHMNGQV-SILGDIYSYGILLLEMFT-GKRP 605
+ + + G K I ++ E + ++ + D++SYG+ + E+ T G +P
Sbjct: 177 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 226
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 100/227 (44%), Gaps = 35/227 (15%)
Query: 389 DNFSKENLIGTGSFGSVY-KGTLGDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNI 447
++F ++G GSF +V L AIK+L+ + I E TR R++
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRH------IIKENKVPYVTRERDV 83
Query: 448 LRVITACSSVDL--EGNDFKALVF--EFMSNGNLDQWLHPSPAEHYQFKKL----SVIQR 499
+ + V L D + L F + NG L +++ +K+ R
Sbjct: 84 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI----------RKIGSFDETCTR 133
Query: 500 LNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSK 559
A ++ SAL+YLH I H DLKP N+LL++DM + DFG AK L +P
Sbjct: 134 FYTA-EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVL-----SPES 184
Query: 560 NQTVSIGLKGSIGYIPPEHMNGQVSIL-GDIYSYGILLLEMFTGKRP 605
Q + G+ Y+ PE + + + D+++ G ++ ++ G P
Sbjct: 185 KQARANAFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 109/248 (43%), Gaps = 39/248 (15%)
Query: 371 PKEVRQSGMSYSDISKSTDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQQGAL 429
P V+ GM ++I+ + F+K IG GSFG V+KG +VAIK++ L++
Sbjct: 6 PVAVQVPGMQ-NNIADPEELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDE 64
Query: 430 K-------SFIDECNALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLH 482
+ + +C++ T++ L+G+ ++ E++ G+ L
Sbjct: 65 IEDIQQEITVLSQCDSSYVTKYYGSY----------LKGSKL-WIIMEYLGGGSALDLLR 113
Query: 483 PSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVG 542
P + +Q + ++ LDYLH H D+K +NVLL + +
Sbjct: 114 AGPFDEFQIA--------TMLKEILKGLDYLHSEKKI---HRDIKAANVLLSEQGDVKLA 162
Query: 543 DFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHM-NGQVSILGDIYSYGILLLEMFT 601
DFG+A +++D K T G+ ++ PE + DI+S GI +E+
Sbjct: 163 DFGVAG---QLTDTQIKRNT----FVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAK 215
Query: 602 GKRPTGDM 609
G+ P DM
Sbjct: 216 GEPPNSDM 223
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 106/218 (48%), Gaps = 32/218 (14%)
Query: 397 IGTGSFGSVYKGTLGD------GTIVAIKVLKLQQQGALKS---FIDECNALKSTRHRNI 447
+G GSFG VY+G D T VA+K + + +L+ F++E + +K ++
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTV--NESASLRERIEFLNEASVMKGFTCHHV 83
Query: 448 LRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHP--SPAEHYQFKKLSVIQRL-NIAI 504
+R++ S +V E M++G+L +L AE+ + +Q + +A
Sbjct: 84 VRLLGVVSK-----GQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 138
Query: 505 DVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVS 564
++A + YL+ H +L N ++ D T +GDFG+ + ++E +D K
Sbjct: 139 EIADGMAYLNA---KKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYE-TDYYRK----- 189
Query: 565 IGLKG--SIGYIPPEHM-NGQVSILGDIYSYGILLLEM 599
G KG + ++ PE + +G + D++S+G++L E+
Sbjct: 190 -GGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 226
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 106/230 (46%), Gaps = 43/230 (18%)
Query: 397 IGTGSFGSVY--------KGTLGDGTIVAIKVLKLQQ-QGALKSFIDECNALKST-RHRN 446
+G G+FG V K + VA+K+LK + L + E +K +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 447 ILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPS--------------PAEHYQFK 492
I+ ++ AC+ +G + ++ E+ S GNL ++L P E FK
Sbjct: 103 IIHLLGACTQ---DGPLY--VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 493 KLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFE 552
L ++ +A ++YL H DL NVL+ ++ + DFGLA+ +
Sbjct: 158 DL-----VSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR---D 206
Query: 553 ISDNPSKNQTVSIGLKGSIGYIPPEHMNGQV-SILGDIYSYGILLLEMFT 601
I++ +T + L + ++ PE + +V + D++S+G+L+ E+FT
Sbjct: 207 INNIDYYKKTTNGRL--PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 99/233 (42%), Gaps = 25/233 (10%)
Query: 379 MSYSDISKSTDNFSKENLIGTGSFGSVYKGT--LGDGTIVAIKVLKLQ--QQGALKSFID 434
M + ++ + IG G++G V+K G VA+K +++Q ++G S I
Sbjct: 1 MEKDGLCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIR 60
Query: 435 ECNALK---STRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQF 491
E L+ + H N++R+ C+ + LVFE + + +L +L P
Sbjct: 61 EVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPT 119
Query: 492 KKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLF 551
+ + ++ + LD+LH H + H DLKP N+L+ + DFGLA+
Sbjct: 120 ETIK-----DMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIY- 170
Query: 552 EISDNPSKNQTVSIGLKGSIGYIPPEH-MNGQVSILGDIYSYGILLLEMFTGK 603
Q + ++ Y PE + + D++S G + EMF K
Sbjct: 171 -------SFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 106/218 (48%), Gaps = 32/218 (14%)
Query: 397 IGTGSFGSVYKGTLGD------GTIVAIKVLKLQQQGALKS---FIDECNALKSTRHRNI 447
+G GSFG VY+G D T VA+K + + +L+ F++E + +K ++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTV--NESASLRERIEFLNEASVMKGFTCHHV 82
Query: 448 LRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHP--SPAEHYQFKKLSVIQRL-NIAI 504
+R++ S +V E M++G+L +L AE+ + +Q + +A
Sbjct: 83 VRLLGVVSK-----GQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 137
Query: 505 DVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVS 564
++A + YL+ H +L N ++ D T +GDFG+ + ++E +D K
Sbjct: 138 EIADGMAYLNA---KKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYE-TDYYRK----- 188
Query: 565 IGLKG--SIGYIPPEHM-NGQVSILGDIYSYGILLLEM 599
G KG + ++ PE + +G + D++S+G++L E+
Sbjct: 189 -GGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 99/233 (42%), Gaps = 25/233 (10%)
Query: 379 MSYSDISKSTDNFSKENLIGTGSFGSVYKGT--LGDGTIVAIKVLKLQ--QQGALKSFID 434
M + ++ + IG G++G V+K G VA+K +++Q ++G S I
Sbjct: 1 MEKDGLCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIR 60
Query: 435 ECNALK---STRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQF 491
E L+ + H N++R+ C+ + LVFE + + +L +L P
Sbjct: 61 EVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPT 119
Query: 492 KKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLF 551
+ + ++ + LD+LH H + H DLKP N+L+ + DFGLA+
Sbjct: 120 ETIK-----DMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIY- 170
Query: 552 EISDNPSKNQTVSIGLKGSIGYIPPEH-MNGQVSILGDIYSYGILLLEMFTGK 603
Q + ++ Y PE + + D++S G + EMF K
Sbjct: 171 -------SFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 108/220 (49%), Gaps = 28/220 (12%)
Query: 389 DNFSKENLIGTGSFGSVYKGT--LGDGTIVAIKVLKLQ-QQGALKSFIDECNALKSTRHR 445
+ + K + +G G++ +VYKG L D +VA+K ++L+ ++GA + I E + LK +H
Sbjct: 2 ETYIKLDKLGEGTYATVYKGKSKLTDN-LVALKEIRLEHEEGAPCTAIREVSLLKDLKHA 60
Query: 446 NILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAID 505
NI +T + E + LVFE++ + +L Q+L ++I N+ +
Sbjct: 61 NI---VTLHDIIHTEKS--LTLVFEYL-DKDLKQYLDDCG---------NIINMHNVKLF 105
Query: 506 VASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSI 565
+ L L + + H DLKP N+L+++ + DFGLA+ I N+ V
Sbjct: 106 LFQLLRGLAYCHRQKVLHRDLKPQNLLINERGELKLADFGLAR-AKSIPTKTYDNEVV-- 162
Query: 566 GLKGSIGYIPPEHMNGQV--SILGDIYSYGILLLEMFTGK 603
++ Y PP+ + G S D++ G + EM TG+
Sbjct: 163 ----TLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGR 198
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 107/231 (46%), Gaps = 45/231 (19%)
Query: 397 IGTGSFGSVY--------KGTLGDGTIVAIKVLKLQQ-QGALKSFIDECNALKST-RHRN 446
+G G+FG V K + VA+K+LK + L + E +K +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 447 ILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPS--------------PAEHYQFK 492
I+ ++ AC+ +G + ++ E+ S GNL ++L P E FK
Sbjct: 103 IITLLGACTQ---DGPLY--VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 493 KLSVIQRLNIAIDVASALDYL-HHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLF 551
L ++ +A ++YL C H DL NVL+ ++ + DFGLA+
Sbjct: 158 DL-----VSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLAR--- 205
Query: 552 EISDNPSKNQTVSIGLKGSIGYIPPEHMNGQV-SILGDIYSYGILLLEMFT 601
+I++ +T + L + ++ PE + +V + D++S+G+L+ E+FT
Sbjct: 206 DINNIDYYKKTTNGRL--PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 119/258 (46%), Gaps = 34/258 (13%)
Query: 389 DNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKL--QQQGALKSFIDECNALKSTRHR 445
+NF K IG G++G VYK G +VA+K ++L + +G + I E + LK H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 446 NILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAID 505
NI++++ + E + LVFE + + +L ++ S L +I+ +
Sbjct: 62 NIVKLLDVIHT---ENKLY--LVFEHV-HQDLKTFMDASALTGI---PLPLIK--SYLFQ 110
Query: 506 VASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSI 565
+ L + H H + H DLKP N+L++ + + DFGLA+ F + ++ V
Sbjct: 111 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVV-- 164
Query: 566 GLKGSIGYIPPEHMNG--QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSI----HMF 619
++ Y PE + G S DI+S G + EM T + +F D I +F
Sbjct: 165 ----TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQLFRIF 216
Query: 620 VSMALPDHVMDILDPSMP 637
++ PD V+ SMP
Sbjct: 217 RTLGTPDEVVWPGVTSMP 234
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 101/230 (43%), Gaps = 38/230 (16%)
Query: 383 DISKSTDNFSKENLIGTGSFGSVYKGTLGD-GTIVAIKVLKLQQQGALKSFID-----EC 436
D+ + K + +G G F +VYK + IVAIK +KL + K I+ E
Sbjct: 4 DVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREI 63
Query: 437 NALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNG----NLDQWLHPSPAEHYQFK 492
L+ H NI+ ++ A +LVF+FM D L +P+ H +
Sbjct: 64 KLLQELSHPNIIGLLDAFGH-----KSNISLVFDFMETDLEVIIKDNSLVLTPS-HIKAY 117
Query: 493 KLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFE 552
L +Q L+YLH H I H DLKP+N+LLD++ + DFGLAK F
Sbjct: 118 MLMTLQ----------GLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKS-FG 163
Query: 553 ISDNPSKNQTVSIGLKGSIGYIPPEHMNG--QVSILGDIYSYGILLLEMF 600
+ +Q V + Y PE + G + D+++ G +L E+
Sbjct: 164 SPNRAYXHQVV------TRWYRAPELLFGARMYGVGVDMWAVGCILAELL 207
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 100/227 (44%), Gaps = 35/227 (15%)
Query: 389 DNFSKENLIGTGSFGSVY-KGTLGDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNI 447
++F ++G GSF +V L AIK+L+ + I E TR R++
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRH------IIKENKVPYVTRERDV 86
Query: 448 LRVITACSSVDL--EGNDFKALVF--EFMSNGNLDQWLHPSPAEHYQFKKL----SVIQR 499
+ + V L D + L F + NG L +++ +K+ R
Sbjct: 87 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI----------RKIGSFDETCTR 136
Query: 500 LNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSK 559
A ++ SAL+YLH I H DLKP N+LL++DM + DFG AK L +P
Sbjct: 137 FYTA-EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVL-----SPES 187
Query: 560 NQTVSIGLKGSIGYIPPEHMNGQVSIL-GDIYSYGILLLEMFTGKRP 605
Q + G+ Y+ PE + + + D+++ G ++ ++ G P
Sbjct: 188 KQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 234
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 105/227 (46%), Gaps = 38/227 (16%)
Query: 394 ENLIGTGSFGSVYKGTL-GDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRVIT 452
E IG G FG V+KG L D ++VAIK L L I++ + R I+ +
Sbjct: 24 EKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQ--REVFIMSNLN 81
Query: 453 ACSSVDLEG--NDFKALVFEFMSNGNLDQWL----HPSPAEHYQFKKLSVIQRLNIAIDV 506
+ V L G ++ +V EF+ G+L L HP K SV +L + +D+
Sbjct: 82 HPNIVKLYGLMHNPPRMVMEFVPCGDLYHRLLDKAHPI--------KWSV--KLRLMLDI 131
Query: 507 ASALDYLHHHCDTPIAHCDLKPSNVLL-----DKDMTAHVGDFGLAKFLFEISDNPSKNQ 561
A ++Y+ + + PI H DL+ N+ L + + A V DFG ++
Sbjct: 132 ALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ---------QSVH 181
Query: 562 TVSIGLKGSIGYIPPEHMNGQ---VSILGDIYSYGILLLEMFTGKRP 605
+VS GL G+ ++ PE + + + D YS+ ++L + TG+ P
Sbjct: 182 SVS-GLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGP 227
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 100/220 (45%), Gaps = 36/220 (16%)
Query: 397 IGTGSFGSVYKGTLGDGTIVAIKVLKLQQQGALKSFIDECNALKST--RHRNILRVITAC 454
IG G FG V++G G VA+K+ +++ +S+ E ++ RH NIL I A
Sbjct: 50 IGKGRFGEVWRGKW-RGEEVAVKIFSSREE---RSWFREAEIYQTVMLRHENILGFIAAD 105
Query: 455 SSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLH 514
+ + LV ++ +G+L +L+ ++V + +A+ AS L +LH
Sbjct: 106 NKDNGTWTQL-WLVSDYHEHGSLFDYLNRYT--------VTVEGMIKLALSTASGLAHLH 156
Query: 515 HHC-----DTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKG 569
IAH DLK N+L+ K+ T + D GLA + S T+ I
Sbjct: 157 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA------VRHDSATDTIDIAPNH 210
Query: 570 SIG---YIPPEHMNGQVSI-------LGDIYSYGILLLEM 599
+G Y+ PE ++ +++ DIY+ G++ E+
Sbjct: 211 RVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 100/227 (44%), Gaps = 35/227 (15%)
Query: 389 DNFSKENLIGTGSFGSVY-KGTLGDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNI 447
++F ++G GSF +V L AIK+L+ + I E TR R++
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRH------IIKENKVPYVTRERDV 85
Query: 448 LRVITACSSVDL--EGNDFKALVF--EFMSNGNLDQWLHPSPAEHYQFKKL----SVIQR 499
+ + V L D + L F + NG L +++ +K+ R
Sbjct: 86 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYI----------RKIGSFDETCTR 135
Query: 500 LNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSK 559
A ++ SAL+YLH I H DLKP N+LL++DM + DFG AK L +P
Sbjct: 136 FYTA-EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVL-----SPES 186
Query: 560 NQTVSIGLKGSIGYIPPEHMNGQ-VSILGDIYSYGILLLEMFTGKRP 605
Q + G+ Y+ PE + + S D+++ G ++ ++ G P
Sbjct: 187 KQARANSFVGTAQYVSPELLTEKSASKSSDLWALGCIIYQLVAGLPP 233
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 100/220 (45%), Gaps = 36/220 (16%)
Query: 397 IGTGSFGSVYKGTLGDGTIVAIKVLKLQQQGALKSFIDECNALKST--RHRNILRVITAC 454
IG G FG V++G G VA+K+ +++ +S+ E ++ RH NIL I A
Sbjct: 14 IGKGRFGEVWRGKW-RGEEVAVKIFSSREE---RSWFREAEIYQTVMLRHENILGFIAAD 69
Query: 455 SSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLH 514
+ + LV ++ +G+L +L+ ++V + +A+ AS L +LH
Sbjct: 70 NKDNGTWTQL-WLVSDYHEHGSLFDYLNRYT--------VTVEGMIKLALSTASGLAHLH 120
Query: 515 HHC-----DTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKG 569
IAH DLK N+L+ K+ T + D GLA + S T+ I
Sbjct: 121 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA------VRHDSATDTIDIAPNH 174
Query: 570 SIG---YIPPEHMNGQVSI-------LGDIYSYGILLLEM 599
+G Y+ PE ++ +++ DIY+ G++ E+
Sbjct: 175 RVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 100/227 (44%), Gaps = 35/227 (15%)
Query: 389 DNFSKENLIGTGSFGSVYKG-TLGDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNI 447
++F ++G GSF +V L AIK+L+ + I E TR R++
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRH------IIKENKVPYVTRERDV 82
Query: 448 LRVITACSSVDL--EGNDFKALVF--EFMSNGNLDQWLHPSPAEHYQFKKL----SVIQR 499
+ + V L D + L F + NG L +++ +K+ R
Sbjct: 83 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI----------RKIGSFDETCTR 132
Query: 500 LNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSK 559
A ++ SAL+YLH I H DLKP N+LL++DM + DFG AK L +P
Sbjct: 133 FYTA-EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVL-----SPES 183
Query: 560 NQTVSIGLKGSIGYIPPEHMNGQVSIL-GDIYSYGILLLEMFTGKRP 605
Q + G+ Y+ PE + + + D+++ G ++ ++ G P
Sbjct: 184 KQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 230
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 100/220 (45%), Gaps = 36/220 (16%)
Query: 397 IGTGSFGSVYKGTLGDGTIVAIKVLKLQQQGALKSFIDECNALKST--RHRNILRVITAC 454
IG G FG V++G G VA+K+ +++ +S+ E ++ RH NIL I A
Sbjct: 11 IGKGRFGEVWRGKW-RGEEVAVKIFSSREE---RSWFREAEIYQTVMLRHENILGFIAAD 66
Query: 455 SSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLH 514
+ + LV ++ +G+L +L+ ++V + +A+ AS L +LH
Sbjct: 67 NKDNGTWTQL-WLVSDYHEHGSLFDYLNRYT--------VTVEGMIKLALSTASGLAHLH 117
Query: 515 HHC-----DTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKG 569
IAH DLK N+L+ K+ T + D GLA + S T+ I
Sbjct: 118 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA------VRHDSATDTIDIAPNH 171
Query: 570 SIG---YIPPEHMNGQVSI-------LGDIYSYGILLLEM 599
+G Y+ PE ++ +++ DIY+ G++ E+
Sbjct: 172 RVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 100/220 (45%), Gaps = 36/220 (16%)
Query: 397 IGTGSFGSVYKGTLGDGTIVAIKVLKLQQQGALKSFIDECNALKST--RHRNILRVITAC 454
IG G FG V++G G VA+K+ +++ +S+ E ++ RH NIL I A
Sbjct: 17 IGKGRFGEVWRGKW-RGEEVAVKIFSSREE---RSWFREAEIYQTVMLRHENILGFIAAD 72
Query: 455 SSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLH 514
+ + LV ++ +G+L +L+ ++V + +A+ AS L +LH
Sbjct: 73 NKDNGTWTQL-WLVSDYHEHGSLFDYLNRYT--------VTVEGMIKLALSTASGLAHLH 123
Query: 515 HHC-----DTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKG 569
IAH DLK N+L+ K+ T + D GLA + S T+ I
Sbjct: 124 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA------VRHDSATDTIDIAPNH 177
Query: 570 SIG---YIPPEHMNGQVSI-------LGDIYSYGILLLEM 599
+G Y+ PE ++ +++ DIY+ G++ E+
Sbjct: 178 RVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 107/231 (46%), Gaps = 45/231 (19%)
Query: 397 IGTGSFGSVY--------KGTLGDGTIVAIKVLKLQQ-QGALKSFIDECNALKST-RHRN 446
+G G+FG V K + VA+K+LK + L + E +K +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 447 ILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPS--------------PAEHYQFK 492
I+ ++ AC+ +G + ++ E+ S GNL ++L P E FK
Sbjct: 103 IINLLGACTQ---DGPLY--VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 493 KLSVIQRLNIAIDVASALDYL-HHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLF 551
L ++ +A ++YL C H DL NVL+ ++ + DFGLA+
Sbjct: 158 DL-----VSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLAR--- 205
Query: 552 EISDNPSKNQTVSIGLKGSIGYIPPEHMNGQV-SILGDIYSYGILLLEMFT 601
+I++ +T + L + ++ PE + +V + D++S+G+L+ E+FT
Sbjct: 206 DINNIDYYKKTTNGRL--PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 100/220 (45%), Gaps = 36/220 (16%)
Query: 397 IGTGSFGSVYKGTLGDGTIVAIKVLKLQQQGALKSFIDECNALKST--RHRNILRVITAC 454
IG G FG V++G G VA+K+ +++ +S+ E ++ RH NIL I A
Sbjct: 12 IGKGRFGEVWRGKW-RGEEVAVKIFSSREE---RSWFREAEIYQTVMLRHENILGFIAAD 67
Query: 455 SSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLH 514
+ + LV ++ +G+L +L+ ++V + +A+ AS L +LH
Sbjct: 68 NKDNGTWTQL-WLVSDYHEHGSLFDYLNRYT--------VTVEGMIKLALSTASGLAHLH 118
Query: 515 HHC-----DTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKG 569
IAH DLK N+L+ K+ T + D GLA + S T+ I
Sbjct: 119 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA------VRHDSATDTIDIAPNH 172
Query: 570 SIG---YIPPEHMNGQVSI-------LGDIYSYGILLLEM 599
+G Y+ PE ++ +++ DIY+ G++ E+
Sbjct: 173 RVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 104/231 (45%), Gaps = 45/231 (19%)
Query: 397 IGTGSFGSVY--------KGTLGDGTIVAIKVLKLQQ-QGALKSFIDECNALKST-RHRN 446
+G G FG V K + VA+K+LK + L + E +K +H+N
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 447 ILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPS--------------PAEHYQFK 492
I+ ++ AC+ +G + ++ E+ S GNL ++L P E FK
Sbjct: 149 IINLLGACTQ---DGPLY--VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 203
Query: 493 KLSVIQRLNIAIDVASALDYL-HHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLF 551
L ++ +A ++YL C H DL NVL+ ++ + DFGLA+ +
Sbjct: 204 DL-----VSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDIN 254
Query: 552 EISDNPSKNQTVSIGLKGSIGYIPPEHMNGQV-SILGDIYSYGILLLEMFT 601
I D K + +K ++ PE + +V + D++S+G+L+ E+FT
Sbjct: 255 NI-DYYKKTTNGRLPVK----WMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 96/210 (45%), Gaps = 26/210 (12%)
Query: 397 IGTGSFGSVYKGTLGDGTIVAIKVLKLQQQ--GALKSFIDECNALKSTRHRNILRVITAC 454
IG G++G VYK G A+K ++L+++ G + I E + LK +H NI+++
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 455 SSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLH 514
+ LVFE + +L + L L + + + + + + Y H
Sbjct: 70 HT-----KKRLVLVFEHLDQ-DLKKLLDVCEG------GLESVTAKSFLLQLLNGIAYCH 117
Query: 515 HHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYI 574
D + H DLKP N+L++++ + DFGLA+ F I ++ V ++ Y
Sbjct: 118 ---DRRVLHRDLKPQNLLINREGELKIADFGLAR-AFGIPVRKYTHEVV------TLWYR 167
Query: 575 PPEHMNG--QVSILGDIYSYGILLLEMFTG 602
P+ + G + S DI+S G + EM G
Sbjct: 168 APDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 100/220 (45%), Gaps = 36/220 (16%)
Query: 397 IGTGSFGSVYKGTLGDGTIVAIKVLKLQQQGALKSFIDECNALKST--RHRNILRVITAC 454
IG G FG V++G G VA+K+ +++ +S+ E ++ RH NIL I A
Sbjct: 37 IGKGRFGEVWRGKW-RGEEVAVKIFSSREE---RSWFREAEIYQTVMLRHENILGFIAAD 92
Query: 455 SSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLH 514
+ + LV ++ +G+L +L+ ++V + +A+ AS L +LH
Sbjct: 93 NKDNGTWTQL-WLVSDYHEHGSLFDYLNRYT--------VTVEGMIKLALSTASGLAHLH 143
Query: 515 HHC-----DTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKG 569
IAH DLK N+L+ K+ T + D GLA + S T+ I
Sbjct: 144 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA------VRHDSATDTIDIAPNH 197
Query: 570 SIG---YIPPEHMNGQVSI-------LGDIYSYGILLLEM 599
+G Y+ PE ++ +++ DIY+ G++ E+
Sbjct: 198 RVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 90/214 (42%), Gaps = 29/214 (13%)
Query: 397 IGTGSFGSV----YKGT-LGDGTIVAIKVLKLQQQGALKS-FIDECNALKSTRHRNILRV 450
+G G FG V Y T G G +VA+K LK L+S + E L++ H +I++
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 75
Query: 451 ITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASAL 510
C +G LV E++ G+L +L P + + Q L A + +
Sbjct: 76 KGCCED---QGEKSVQLVMEYVPLGSLRDYL-PRHC-------VGLAQLLLFAQQICEGM 124
Query: 511 DYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGS 570
YLH H L NVLLD D +GDFGLAK + P ++ + G
Sbjct: 125 AYLH---AQHYIHRALAARNVLLDNDRLVKIGDFGLAKAV------PEGHEYYRVREDGD 175
Query: 571 ---IGYIPPEHMNGQVSILGDIYSYGILLLEMFT 601
Y P + D++S+G+ L E+ T
Sbjct: 176 SPVFWYAPECLKECKFYYASDVWSFGVTLYELLT 209
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 96/210 (45%), Gaps = 26/210 (12%)
Query: 397 IGTGSFGSVYKGTLGDGTIVAIKVLKLQQQ--GALKSFIDECNALKSTRHRNILRVITAC 454
IG G++G VYK G A+K ++L+++ G + I E + LK +H NI+++
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 455 SSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLH 514
+ LVFE + +L + L L + + + + + + Y H
Sbjct: 70 HT-----KKRLVLVFEHLDQ-DLKKLLDVCEG------GLESVTAKSFLLQLLNGIAYCH 117
Query: 515 HHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYI 574
D + H DLKP N+L++++ + DFGLA+ F I ++ V ++ Y
Sbjct: 118 ---DRRVLHRDLKPQNLLINREGELKIADFGLAR-AFGIPVRKYTHEVV------TLWYR 167
Query: 575 PPEHMNG--QVSILGDIYSYGILLLEMFTG 602
P+ + G + S DI+S G + EM G
Sbjct: 168 APDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 97/210 (46%), Gaps = 26/210 (12%)
Query: 397 IGTGSFGSVYKGTLGDGTIVAIKVLKLQQQ--GALKSFIDECNALKSTRHRNILRVITAC 454
IG G++G VYK G A+K ++L+++ G + I E + LK +H NI+++
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 455 SSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLH 514
+ LVFE + +L + L L + + + + + + Y H
Sbjct: 70 HT-----KKRLVLVFEHLDQ-DLKKLLDVCEG------GLESVTAKSFLLQLLNGIAYCH 117
Query: 515 HHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYI 574
D + H DLKP N+L++++ + DFGLA+ F I P + T I ++ Y
Sbjct: 118 ---DRRVLHRDLKPQNLLINREGELKIADFGLAR-AFGI---PVRKYTHEI---VTLWYR 167
Query: 575 PPEHMNG--QVSILGDIYSYGILLLEMFTG 602
P+ + G + S DI+S G + EM G
Sbjct: 168 APDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 100/227 (44%), Gaps = 35/227 (15%)
Query: 389 DNFSKENLIGTGSFGSVYKG-TLGDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNI 447
++F ++G GSF +V L AIK+L+ + I E TR R++
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRH------IIKENKVPYVTRERDV 85
Query: 448 LRVITACSSVDL--EGNDFKALVF--EFMSNGNLDQWLHPSPAEHYQFKKL----SVIQR 499
+ + V L D + L F + NG L +++ +K+ R
Sbjct: 86 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI----------RKIGSFDETCTR 135
Query: 500 LNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSK 559
A ++ SAL+YLH I H DLKP N+LL++DM + DFG AK L +P
Sbjct: 136 FYTA-EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVL-----SPES 186
Query: 560 NQTVSIGLKGSIGYIPPEHMNGQVSIL-GDIYSYGILLLEMFTGKRP 605
Q + G+ Y+ PE + + + D+++ G ++ ++ G P
Sbjct: 187 KQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 115/259 (44%), Gaps = 43/259 (16%)
Query: 386 KSTDNFSKENLIGTGSFG-SVYKGTLGDGTIVAIKVLKLQQQGA--LKSFIDECNALKST 442
+S + + + IG GSFG ++ + DG IK + + + + + E L +
Sbjct: 21 QSMEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANM 80
Query: 443 RHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNI 502
+H NI++ + E N +V ++ G+L + ++ +Q ++ L+
Sbjct: 81 KHPNIVQYRES-----FEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQI-----LDW 130
Query: 503 AIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQT 562
+ + AL ++H D I H D+K N+ L KD T +GDFG+A+ L N T
Sbjct: 131 FVQICLALKHVH---DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVL---------NST 178
Query: 563 VSIGLKGSIG---YIPPEHM-NGQVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHM 618
V + + IG Y+ PE N + DI++ G +L E+ T K H
Sbjct: 179 VELA-RACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLK-------------HA 224
Query: 619 FVSMALPDHVMDILDPSMP 637
F + ++ + V+ I+ S P
Sbjct: 225 FEAGSMKNLVLKIISGSFP 243
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 90/214 (42%), Gaps = 29/214 (13%)
Query: 397 IGTGSFGSV----YKGT-LGDGTIVAIKVLKLQQQGALKS-FIDECNALKSTRHRNILRV 450
+G G FG V Y T G G +VA+K LK L+S + E L++ H +I++
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 76
Query: 451 ITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASAL 510
C +G LV E++ G+L +L P + + Q L A + +
Sbjct: 77 KGCCED---QGEKSVQLVMEYVPLGSLRDYL-PRHC-------VGLAQLLLFAQQICEGM 125
Query: 511 DYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGS 570
YLH H L NVLLD D +GDFGLAK + P ++ + G
Sbjct: 126 AYLH---AQHYIHRALAARNVLLDNDRLVKIGDFGLAKAV------PEGHEYYRVREDGD 176
Query: 571 ---IGYIPPEHMNGQVSILGDIYSYGILLLEMFT 601
Y P + D++S+G+ L E+ T
Sbjct: 177 SPVFWYAPECLKECKFYYASDVWSFGVTLYELLT 210
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 100/227 (44%), Gaps = 35/227 (15%)
Query: 389 DNFSKENLIGTGSFGSVYKG-TLGDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNI 447
++F ++G GSF +V L AIK+L+ + I E TR R++
Sbjct: 14 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRH------IIKENKVPYVTRERDV 67
Query: 448 LRVITACSSVDL--EGNDFKALVF--EFMSNGNLDQWLHPSPAEHYQFKKL----SVIQR 499
+ + V L D + L F + NG L +++ +K+ R
Sbjct: 68 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI----------RKIGSFDETCTR 117
Query: 500 LNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSK 559
A ++ SAL+YLH I H DLKP N+LL++DM + DFG AK L +P
Sbjct: 118 FYTA-EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVL-----SPES 168
Query: 560 NQTVSIGLKGSIGYIPPEHMNGQVSIL-GDIYSYGILLLEMFTGKRP 605
Q + G+ Y+ PE + + + D+++ G ++ ++ G P
Sbjct: 169 KQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 215
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 100/227 (44%), Gaps = 35/227 (15%)
Query: 389 DNFSKENLIGTGSFGSVY-KGTLGDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNI 447
++F ++G GSF +V L AIK+L+ + I E TR R++
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRH------IIKENKVPYVTRERDV 83
Query: 448 LRVITACSSVDL--EGNDFKALVF--EFMSNGNLDQWLHPSPAEHYQFKKL----SVIQR 499
+ + V L D + L F + NG L +++ +K+ R
Sbjct: 84 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI----------RKIGSFDETCTR 133
Query: 500 LNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSK 559
A ++ SAL+YLH I H DLKP N+LL++DM + DFG AK L +P
Sbjct: 134 FYTA-EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVL-----SPES 184
Query: 560 NQTVSIGLKGSIGYIPPEHMNGQVSIL-GDIYSYGILLLEMFTGKRP 605
Q + G+ Y+ PE + + + D+++ G ++ ++ G P
Sbjct: 185 KQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 100/227 (44%), Gaps = 35/227 (15%)
Query: 389 DNFSKENLIGTGSFGSVYKG-TLGDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNI 447
++F ++G GSF +V L AIK+L+ + I E TR R++
Sbjct: 35 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRH------IIKENKVPYVTRERDV 88
Query: 448 LRVITACSSVDL--EGNDFKALVF--EFMSNGNLDQWLHPSPAEHYQFKKL----SVIQR 499
+ + V L D + L F + NG L +++ +K+ R
Sbjct: 89 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI----------RKIGSFDETCTR 138
Query: 500 LNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSK 559
A ++ SAL+YLH I H DLKP N+LL++DM + DFG AK L +P
Sbjct: 139 FYTA-EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVL-----SPES 189
Query: 560 NQTVSIGLKGSIGYIPPEHMNGQVSIL-GDIYSYGILLLEMFTGKRP 605
Q + G+ Y+ PE + + + D+++ G ++ ++ G P
Sbjct: 190 KQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 236
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 95/225 (42%), Gaps = 31/225 (13%)
Query: 387 STDNFSKENLIGTGSFGSVYKGTLGDGT-IVAIKVL---KLQQQGALKSFIDECNALKST 442
+ D+F +G G FG+VY I+A+KVL +L+++G E
Sbjct: 12 TIDDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHL 71
Query: 443 RHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQR-LN 501
RH NILR+ L+ EF G L + L +H +F + QR
Sbjct: 72 RHPNILRMYNY-----FHDRKRIYLMLEFAPRGELYKEL----QKHGRFDE----QRSAT 118
Query: 502 IAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQ 561
++A AL Y H + + H D+KP N+L+ + DFG + PS +
Sbjct: 119 FMEELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWS------VHAPSLRR 169
Query: 562 TVSIGLKGSIGYIPPEHMNGQVSILG-DIYSYGILLLEMFTGKRP 605
+ G++ Y+PPE + G+ D++ G+L E G P
Sbjct: 170 RX---MCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPP 211
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 100/227 (44%), Gaps = 35/227 (15%)
Query: 389 DNFSKENLIGTGSFGSVY-KGTLGDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNI 447
++F ++G GSF +V L AIK+L+ + I E TR R++
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRH------IIKENKVPYVTRERDV 86
Query: 448 LRVITACSSVDL--EGNDFKALVF--EFMSNGNLDQWLHPSPAEHYQFKKL----SVIQR 499
+ + V L D + L F + NG L +++ +K+ R
Sbjct: 87 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI----------RKIGSFDETCTR 136
Query: 500 LNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSK 559
A ++ SAL+YLH I H DLKP N+LL++DM + DFG AK L +P
Sbjct: 137 FYTA-EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVL-----SPES 187
Query: 560 NQTVSIGLKGSIGYIPPEHMNGQVSIL-GDIYSYGILLLEMFTGKRP 605
Q + G+ Y+ PE + + + D+++ G ++ ++ G P
Sbjct: 188 KQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 234
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 100/227 (44%), Gaps = 35/227 (15%)
Query: 389 DNFSKENLIGTGSFGSVYKG-TLGDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNI 447
++F ++G GSF +V L AIK+L+ + I E TR R++
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRH------IIKENKVPYVTRERDV 85
Query: 448 LRVITACSSVDL--EGNDFKALVF--EFMSNGNLDQWLHPSPAEHYQFKKL----SVIQR 499
+ + V L D + L F + NG L +++ +K+ R
Sbjct: 86 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI----------RKIGSFDETCTR 135
Query: 500 LNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSK 559
A ++ SAL+YLH I H DLKP N+LL++DM + DFG AK L +P
Sbjct: 136 FYTA-EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVL-----SPES 186
Query: 560 NQTVSIGLKGSIGYIPPEHMNGQVSIL-GDIYSYGILLLEMFTGKRP 605
Q + G+ Y+ PE + + + D+++ G ++ ++ G P
Sbjct: 187 KQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 106/231 (45%), Gaps = 45/231 (19%)
Query: 397 IGTGSFGSVY--------KGTLGDGTIVAIKVLKLQQ-QGALKSFIDECNALKST-RHRN 446
+G G FG V K + VA+K+LK + L + E +K +H+N
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 447 ILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPS--------------PAEHYQFK 492
I+ ++ AC+ +G + ++ E+ S GNL ++L P E FK
Sbjct: 90 IINLLGACTQ---DGPLY--VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 144
Query: 493 KLSVIQRLNIAIDVASALDYL-HHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLF 551
L ++ +A ++YL C H DL NVL+ ++ + DFGLA+
Sbjct: 145 DL-----VSCTYQLARGMEYLASQKC----IHRDLTARNVLVTENNVMKIADFGLAR--- 192
Query: 552 EISDNPSKNQTVSIGLKGSIGYIPPEHMNGQV-SILGDIYSYGILLLEMFT 601
+I++ +T + L + ++ PE + +V + D++S+G+L+ E+FT
Sbjct: 193 DINNIDYYKKTTNGRL--PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 105/227 (46%), Gaps = 38/227 (16%)
Query: 394 ENLIGTGSFGSVYKGTL-GDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRVIT 452
E IG G FG V+KG L D ++VAIK L L I++ + R I+ +
Sbjct: 24 EKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQ--REVFIMSNLN 81
Query: 453 ACSSVDLEG--NDFKALVFEFMSNGNLDQWL----HPSPAEHYQFKKLSVIQRLNIAIDV 506
+ V L G ++ +V EF+ G+L L HP K SV +L + +D+
Sbjct: 82 HPNIVKLYGLMHNPPRMVMEFVPCGDLYHRLLDKAHPI--------KWSV--KLRLMLDI 131
Query: 507 ASALDYLHHHCDTPIAHCDLKPSNVLL-----DKDMTAHVGDFGLAKFLFEISDNPSKNQ 561
A ++Y+ + + PI H DL+ N+ L + + A V DF L++
Sbjct: 132 ALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ---------QSVH 181
Query: 562 TVSIGLKGSIGYIPPEHMNGQ---VSILGDIYSYGILLLEMFTGKRP 605
+VS GL G+ ++ PE + + + D YS+ ++L + TG+ P
Sbjct: 182 SVS-GLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGP 227
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 100/227 (44%), Gaps = 35/227 (15%)
Query: 389 DNFSKENLIGTGSFGS-VYKGTLGDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNI 447
++F ++G GSF + V L AIK+L+ + I E TR R++
Sbjct: 30 EDFKFGKILGEGSFSTTVLARELATSREYAIKILEKRH------IIKENKVPYVTRERDV 83
Query: 448 LRVITACSSVDL--EGNDFKALVF--EFMSNGNLDQWLHPSPAEHYQFKKL----SVIQR 499
+ + V L D + L F + NG L +++ +K+ R
Sbjct: 84 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI----------RKIGSFDETCTR 133
Query: 500 LNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSK 559
A ++ SAL+YLH I H DLKP N+LL++DM + DFG AK L +P
Sbjct: 134 FYTA-EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVL-----SPES 184
Query: 560 NQTVSIGLKGSIGYIPPEHMNGQVSIL-GDIYSYGILLLEMFTGKRP 605
Q + G+ Y+ PE + + + D+++ G ++ ++ G P
Sbjct: 185 KQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 112/255 (43%), Gaps = 32/255 (12%)
Query: 389 DNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQQGALK-SFIDECNALKSTRHRN 446
D+F K + +G G+ G V+K + G ++A K++ L+ + A++ I E L
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 447 ILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRL---NIA 503
I+ A S + ++ E M G+LDQ L KK I ++
Sbjct: 66 IVGFYGAFYS-----DGEISICMEHMDGGSLDQVL----------KKAGRIPEQILGKVS 110
Query: 504 IDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTV 563
I V L YL I H D+KPSN+L++ + DFG++ L + ++
Sbjct: 111 IAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID---------SM 159
Query: 564 SIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVSM 622
+ G+ Y+ PE + G S+ DI+S G+ L+EM G+ P + S
Sbjct: 160 ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIF 219
Query: 623 ALPDHVMDILDPSMP 637
L D++++ P +P
Sbjct: 220 ELLDYIVNEPPPKLP 234
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 100/227 (44%), Gaps = 35/227 (15%)
Query: 389 DNFSKENLIGTGSFGSVYKG-TLGDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNI 447
++F ++G GSF +V L AIK+L+ + I E TR R++
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRH------IIKENKVPYVTRERDV 85
Query: 448 LRVITACSSVDL--EGNDFKALVF--EFMSNGNLDQWLHPSPAEHYQFKKL----SVIQR 499
+ + V L D + L F + NG L +++ +K+ R
Sbjct: 86 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI----------RKIGSFDETCTR 135
Query: 500 LNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSK 559
A ++ SAL+YLH I H DLKP N+LL++DM + DFG AK L +P
Sbjct: 136 FYTA-EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVL-----SPES 186
Query: 560 NQTVSIGLKGSIGYIPPEHMNGQVSIL-GDIYSYGILLLEMFTGKRP 605
Q + G+ Y+ PE + + + D+++ G ++ ++ G P
Sbjct: 187 KQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 110/237 (46%), Gaps = 32/237 (13%)
Query: 382 SDISKSTDNFSKENLIGTGSFGSVYKGTL-----GDGT-IVAIKVLKLQQQGALKS-FID 434
+IS S F +E +G FG VYKG L G+ T VAIK LK + +G L+ F
Sbjct: 21 KEISLSAVRFMEE--LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRH 78
Query: 435 ECNALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWL-HPSPA------- 486
E +H N++ ++ + + +++F + S+G+L ++L SP
Sbjct: 79 EAMLRARLQHPNVVCLLGVVTK-----DQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTD 133
Query: 487 -EHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFG 545
+ L +++ +A+ ++YL H + H DL NVL+ + + D G
Sbjct: 134 DDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLG 190
Query: 546 LAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEH-MNGQVSILGDIYSYGILLLEMFT 601
L + ++ ++ I ++ PE M G+ SI DI+SYG++L E+F+
Sbjct: 191 LFREVYAADYYKLLGNSLL-----PIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 242
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 110/223 (49%), Gaps = 27/223 (12%)
Query: 390 NFSKENLIGTGSFGSVYKGT-LGDGTIVAIK--VLKLQQQGALKSFIDECNALKSTRHRN 446
+ K IG G+FG V+K G VA+K +++ +++G + + E L+ +H N
Sbjct: 19 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHEN 78
Query: 447 ILRVITACSSVDLEGNDFKA---LVFEFMSN---GNLDQWLHPSPAEHYQFKKLSVIQRL 500
++ +I C + N KA LVF+F + G L L +F LS I+R+
Sbjct: 79 VVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVL-------VKFT-LSEIKRV 130
Query: 501 NIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKN 560
+ + L Y+H + I H D+K +NVL+ +D + DFGLA+ F ++ N N
Sbjct: 131 MQML--LNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLAR-AFSLAKNSQPN 184
Query: 561 QTVSIGLKGSIGYIPPEHMNGQVSILG--DIYSYGILLLEMFT 601
+ + + ++ Y PPE + G+ D++ G ++ EM+T
Sbjct: 185 RYXNRVV--TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 110/237 (46%), Gaps = 32/237 (13%)
Query: 382 SDISKSTDNFSKENLIGTGSFGSVYKGTL-----GDGT-IVAIKVLKLQQQGALKS-FID 434
+IS S F +E +G FG VYKG L G+ T VAIK LK + +G L+ F
Sbjct: 4 KEISLSAVRFMEE--LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRH 61
Query: 435 ECNALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWL-HPSPA------- 486
E +H N++ ++ + + +++F + S+G+L ++L SP
Sbjct: 62 EAMLRARLQHPNVVCLLGVVTK-----DQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTD 116
Query: 487 -EHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFG 545
+ L +++ +A+ ++YL H + H DL NVL+ + + D G
Sbjct: 117 DDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLG 173
Query: 546 LAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEH-MNGQVSILGDIYSYGILLLEMFT 601
L + ++ ++ I ++ PE M G+ SI DI+SYG++L E+F+
Sbjct: 174 LFREVYAADYYKLLGNSLL-----PIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 95/225 (42%), Gaps = 31/225 (13%)
Query: 387 STDNFSKENLIGTGSFGSVYKGTLGDGT-IVAIKVL---KLQQQGALKSFIDECNALKST 442
+ D+F +G G FG+VY I+A+KVL +L+++G E
Sbjct: 13 TIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHL 72
Query: 443 RHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQR-LN 501
RH NILR+ L+ EF G L + L +H +F + QR
Sbjct: 73 RHPNILRMYNY-----FHDRKRIYLMLEFAPRGELYKEL----QKHGRFDE----QRSAT 119
Query: 502 IAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQ 561
++A AL Y H + + H D+KP N+L+ + DFG + PS +
Sbjct: 120 FMEELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWS------VHAPSLRR 170
Query: 562 TVSIGLKGSIGYIPPEHMNGQVSILG-DIYSYGILLLEMFTGKRP 605
+ G++ Y+PPE + G+ D++ G+L E G P
Sbjct: 171 RX---MCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPP 212
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 95/225 (42%), Gaps = 31/225 (13%)
Query: 387 STDNFSKENLIGTGSFGSVYKGTLGDGT-IVAIKVL---KLQQQGALKSFIDECNALKST 442
+ D+F +G G FG+VY I+A+KVL +L+++G E
Sbjct: 12 TIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHL 71
Query: 443 RHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQR-LN 501
RH NILR+ L+ EF G L + L +H +F + QR
Sbjct: 72 RHPNILRMYNY-----FHDRKRIYLMLEFAPRGELYKEL----QKHGRFDE----QRSAT 118
Query: 502 IAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQ 561
++A AL Y H + + H D+KP N+L+ + DFG + PS +
Sbjct: 119 FMEELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWS------VHAPSLRR 169
Query: 562 TVSIGLKGSIGYIPPEHMNGQVSILG-DIYSYGILLLEMFTGKRP 605
+ G++ Y+PPE + G+ D++ G+L E G P
Sbjct: 170 RX---MCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPP 211
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 100/227 (44%), Gaps = 35/227 (15%)
Query: 389 DNFSKENLIGTGSFGSVY-KGTLGDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNI 447
++F ++G GSF +V L AIK+L+ + I E TR R++
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRH------IIKENKVPYVTRERDV 83
Query: 448 LRVITACSSVDL--EGNDFKALVF--EFMSNGNLDQWLHPSPAEHYQFKKL----SVIQR 499
+ + V L D + L F + NG L +++ +K+ R
Sbjct: 84 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI----------RKIGSFDETCTR 133
Query: 500 LNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSK 559
A ++ SAL+YLH I H DLKP N+LL++DM + DFG AK L +P
Sbjct: 134 FYTA-EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVL-----SPES 184
Query: 560 NQTVSIGLKGSIGYIPPEHMNGQVSIL-GDIYSYGILLLEMFTGKRP 605
Q + G+ Y+ PE + + + D+++ G ++ ++ G P
Sbjct: 185 KQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 100/227 (44%), Gaps = 35/227 (15%)
Query: 389 DNFSKENLIGTGSFGSVYKG-TLGDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNI 447
++F ++G GSF +V L AIK+L+ + I E TR R++
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRH------IIKENKVPYVTRERDV 85
Query: 448 LRVITACSSVDL--EGNDFKALVF--EFMSNGNLDQWLHPSPAEHYQFKKL----SVIQR 499
+ + V L D + L F + NG L +++ +K+ R
Sbjct: 86 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI----------RKIGSFDETCTR 135
Query: 500 LNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSK 559
A ++ SAL+YLH I H DLKP N+LL++DM + DFG AK L +P
Sbjct: 136 FYTA-EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVL-----SPES 186
Query: 560 NQTVSIGLKGSIGYIPPEHMNGQVSIL-GDIYSYGILLLEMFTGKRP 605
Q + G+ Y+ PE + + + D+++ G ++ ++ G P
Sbjct: 187 KQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 106/231 (45%), Gaps = 45/231 (19%)
Query: 397 IGTGSFGSVY--------KGTLGDGTIVAIKVLKLQQ-QGALKSFIDECNALKST-RHRN 446
+G G FG V K + VA+K+LK + L + E +K +H+N
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 447 ILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPS--------------PAEHYQFK 492
I+ ++ AC+ +G + ++ E+ S GNL ++L P E FK
Sbjct: 92 IINLLGACTQ---DGPLY--VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 146
Query: 493 KLSVIQRLNIAIDVASALDYL-HHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLF 551
L ++ +A ++YL C H DL NVL+ ++ + DFGLA+
Sbjct: 147 DL-----VSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLAR--- 194
Query: 552 EISDNPSKNQTVSIGLKGSIGYIPPEHMNGQV-SILGDIYSYGILLLEMFT 601
+I++ +T + L + ++ PE + +V + D++S+G+L+ E+FT
Sbjct: 195 DINNIDYYKKTTNGRL--PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 104/231 (45%), Gaps = 45/231 (19%)
Query: 397 IGTGSFGSVY--------KGTLGDGTIVAIKVLKLQQ-QGALKSFIDECNALKST-RHRN 446
+G G FG V K + VA+K+LK + L + E +K +H+N
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 447 ILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPS--------------PAEHYQFK 492
I+ ++ AC+ +G + ++ E+ S GNL ++L P E FK
Sbjct: 95 IINLLGACTQ---DGPLY--VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 149
Query: 493 KLSVIQRLNIAIDVASALDYL-HHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLF 551
L ++ +A ++YL C H DL NVL+ ++ + DFGLA+ +
Sbjct: 150 DL-----VSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDIN 200
Query: 552 EISDNPSKNQTVSIGLKGSIGYIPPEHMNGQV-SILGDIYSYGILLLEMFT 601
I D K + +K ++ PE + +V + D++S+G+L+ E+FT
Sbjct: 201 NI-DYYKKTTNGRLPVK----WMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 100/227 (44%), Gaps = 35/227 (15%)
Query: 389 DNFSKENLIGTGSFGSVYKG-TLGDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNI 447
++F ++G GSF +V L AIK+L+ + I E TR R++
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRH------IIKENKVPYVTRERDV 82
Query: 448 LRVITACSSVDL--EGNDFKALVF--EFMSNGNLDQWLHPSPAEHYQFKKL----SVIQR 499
+ + V L D + L F + NG L +++ +K+ R
Sbjct: 83 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI----------RKIGSFDETCTR 132
Query: 500 LNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSK 559
A ++ SAL+YLH I H DLKP N+LL++DM + DFG AK L +P
Sbjct: 133 FYTA-EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVL-----SPES 183
Query: 560 NQTVSIGLKGSIGYIPPEHMNGQVSIL-GDIYSYGILLLEMFTGKRP 605
Q + G+ Y+ PE + + + D+++ G ++ ++ G P
Sbjct: 184 KQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 230
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 100/227 (44%), Gaps = 35/227 (15%)
Query: 389 DNFSKENLIGTGSFGSVY-KGTLGDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNI 447
++F ++G GSF +V L AIK+L+ + I E TR R++
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRH------IIKENKVPYVTRERDV 85
Query: 448 LRVITACSSVDL--EGNDFKALVF--EFMSNGNLDQWLHPSPAEHYQFKKL----SVIQR 499
+ + V L D + L F + NG L +++ +K+ R
Sbjct: 86 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI----------RKIGSFDETCTR 135
Query: 500 LNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSK 559
A ++ SAL+YLH I H DLKP N+LL++DM + DFG AK L +P
Sbjct: 136 FYTA-EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVL-----SPES 186
Query: 560 NQTVSIGLKGSIGYIPPEHMNGQVSIL-GDIYSYGILLLEMFTGKRP 605
Q + G+ Y+ PE + + + D+++ G ++ ++ G P
Sbjct: 187 KQARANXFVGTAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAGLPP 233
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 100/227 (44%), Gaps = 35/227 (15%)
Query: 389 DNFSKENLIGTGSFGSVYKG-TLGDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNI 447
++F ++G GSF +V L AIK+L+ + I E TR R++
Sbjct: 37 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRH------IIKENKVPYVTRERDV 90
Query: 448 LRVITACSSVDLEG--NDFKALVF--EFMSNGNLDQWLHPSPAEHYQFKKL----SVIQR 499
+ + V L D + L F + NG L +++ +K+ R
Sbjct: 91 MSRLDHPFFVKLYFCFQDDEKLYFGLSYAKNGELLKYI----------RKIGSFDETCTR 140
Query: 500 LNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSK 559
A ++ SAL+YLH I H DLKP N+LL++DM + DFG AK L +P
Sbjct: 141 FYTA-EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVL-----SPES 191
Query: 560 NQTVSIGLKGSIGYIPPEHMNGQVSIL-GDIYSYGILLLEMFTGKRP 605
Q + G+ Y+ PE + + + D+++ G ++ ++ G P
Sbjct: 192 KQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 238
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 101/243 (41%), Gaps = 50/243 (20%)
Query: 386 KSTDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQQGALKSFIDECNALKSTRH 444
+ +F + ++G G+FG V K D AIK ++ + L + + E L S H
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIR-HTEEKLSTILSEVMLLASLNH 61
Query: 445 RNILRVITACSSVDLEGNDF---------KALVF---EFMSNGNLDQWLHPSPAEHYQFK 492
+ ++R A LE +F K+ +F E+ N L +H + +
Sbjct: 62 QYVVRYYAAW----LERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDE 117
Query: 493 KLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFE 552
+ ++ + AL Y+H I H DLKP N+ +D+ +GDFGLAK +
Sbjct: 118 YWRLFRQ------ILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHR 168
Query: 553 ISD----------NPSKNQTVSIGLKGSIGYIPPE------HMNGQVSILGDIYSYGILL 596
D S N T +I G+ Y+ E H N ++ D+YS GI+
Sbjct: 169 SLDILKLDSQNLPGSSDNLTSAI---GTAMYVATEVLDGTGHYNEKI----DMYSLGIIF 221
Query: 597 LEM 599
EM
Sbjct: 222 FEM 224
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 101/223 (45%), Gaps = 32/223 (14%)
Query: 389 DNFSKENLIGTGSFGSVYKGT-LGDGTIVAIKVLKLQQQGALK-SFIDECNALKSTRHRN 446
D+F K + +G G+ G V+K + G ++A K++ L+ + A++ I E L
Sbjct: 68 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 127
Query: 447 ILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRL---NIA 503
I+ A S + ++ E M G+LDQ L KK I ++
Sbjct: 128 IVGFYGAFYS-----DGEISICMEHMDGGSLDQVL----------KKAGRIPEQILGKVS 172
Query: 504 IDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTV 563
I V L YL I H D+KPSN+L++ + DFG++ L + ++
Sbjct: 173 IAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLID---------SM 221
Query: 564 SIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRP 605
+ G+ Y+ PE + G S+ DI+S G+ L+EM G+ P
Sbjct: 222 ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 264
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 97/227 (42%), Gaps = 21/227 (9%)
Query: 388 TDNFSKENLIGTGSFGSVY-KGTLGDGTIVAIKVLKL---QQQGALKSFIDECNALKSTR 443
+D + ++G G V+ L D VA+KVL+ + F E +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 444 HRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIA 503
H I+ V + +V E++ L +H ++ + + +
Sbjct: 71 HPAIVAVYD-TGEAETPAGPLPYIVMEYVDGVTLRDIVHTE-------GPMTPKRAIEVI 122
Query: 504 IDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTV 563
D AL++ H + I H D+KP+N+L+ V DFG+A+ + + + S QT
Sbjct: 123 ADACQALNFSHQNG---IIHRDVKPANILISATNAVKVVDFGIARAIADSGN--SVXQTA 177
Query: 564 SIGLKGSIGYIPPEHMNGQ-VSILGDIYSYGILLLEMFTGKRP-TGD 608
++ G+ Y+ PE G V D+YS G +L E+ TG+ P TGD
Sbjct: 178 AV--IGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGD 222
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 104/220 (47%), Gaps = 26/220 (11%)
Query: 389 DNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQQGALK-SFIDECNALKSTRHRN 446
D+F K + +G G+ G V+K + G ++A K++ L+ + A++ I E L
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 447 ILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDV 506
I+ A S + ++ E M G+LDQ L + Q ++ +++IA V
Sbjct: 66 IVGFYGAFYS-----DGEISICMEHMDGGSLDQVLKKAGRIPEQ-----ILGKVSIA--V 113
Query: 507 ASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIG 566
L YL I H D+KPSN+L++ + DFG++ L + +++
Sbjct: 114 IKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID---------SMANS 162
Query: 567 LKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRP 605
G+ Y+ PE + G S+ DI+S G+ L+EM G+ P
Sbjct: 163 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 104/220 (47%), Gaps = 26/220 (11%)
Query: 389 DNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQQGALK-SFIDECNALKSTRHRN 446
D+F K + +G G+ G V+K + G ++A K++ L+ + A++ I E L
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 447 ILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDV 506
I+ A S + ++ E M G+LDQ L + Q ++ +++IA V
Sbjct: 66 IVGFYGAFYS-----DGEISICMEHMDGGSLDQVLKKAGRIPEQ-----ILGKVSIA--V 113
Query: 507 ASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIG 566
L YL I H D+KPSN+L++ + DFG++ L + +++
Sbjct: 114 IKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID---------SMANS 162
Query: 567 LKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRP 605
G+ Y+ PE + G S+ DI+S G+ L+EM G+ P
Sbjct: 163 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 103/224 (45%), Gaps = 26/224 (11%)
Query: 389 DNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQQGALK-SFIDECNALKSTRHRN 446
D+F K + +G G+ G V+K + G ++A K++ L+ + A++ I E L
Sbjct: 9 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 68
Query: 447 ILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDV 506
I+ A S + ++ E M G+LDQ L + Q ++ +++IA V
Sbjct: 69 IVGFYGAFYS-----DGEISICMEHMDGGSLDQVLKKAGRIPEQ-----ILGKVSIA--V 116
Query: 507 ASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIG 566
L YL I H D+KPSN+L++ + DFG++ L + N
Sbjct: 117 IKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMANE--------- 165
Query: 567 LKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRPTGDM 609
G+ Y+ PE + G S+ DI+S G+ L+EM G+ P M
Sbjct: 166 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPRPPM 209
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 104/220 (47%), Gaps = 26/220 (11%)
Query: 389 DNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQQGALK-SFIDECNALKSTRHRN 446
D+F K + +G G+ G V+K + G ++A K++ L+ + A++ I E L
Sbjct: 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 92
Query: 447 ILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDV 506
I+ A S + ++ E M G+LDQ L + Q ++ +++IA V
Sbjct: 93 IVGFYGAFYS-----DGEISICMEHMDGGSLDQVLKKAGRIPEQ-----ILGKVSIA--V 140
Query: 507 ASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIG 566
L YL I H D+KPSN+L++ + DFG++ L + +++
Sbjct: 141 IKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID---------SMANS 189
Query: 567 LKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRP 605
G+ Y+ PE + G S+ DI+S G+ L+EM G+ P
Sbjct: 190 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 229
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 104/220 (47%), Gaps = 26/220 (11%)
Query: 389 DNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQQGALK-SFIDECNALKSTRHRN 446
D+F K + +G G+ G V+K + G ++A K++ L+ + A++ I E L
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 447 ILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDV 506
I+ A S + ++ E M G+LDQ L + Q ++ +++IA V
Sbjct: 66 IVGFYGAFYS-----DGEISICMEHMDGGSLDQVLKKAGRIPEQ-----ILGKVSIA--V 113
Query: 507 ASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIG 566
L YL I H D+KPSN+L++ + DFG++ L + +++
Sbjct: 114 IKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID---------SMANS 162
Query: 567 LKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRP 605
G+ Y+ PE + G S+ DI+S G+ L+EM G+ P
Sbjct: 163 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 104/220 (47%), Gaps = 26/220 (11%)
Query: 389 DNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQQGALK-SFIDECNALKSTRHRN 446
D+F K + +G G+ G V+K + G ++A K++ L+ + A++ I E L
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 447 ILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDV 506
I+ A S + ++ E M G+LDQ L + Q ++ +++IA V
Sbjct: 66 IVGFYGAFYS-----DGEISICMEHMDGGSLDQVLKKAGRIPEQ-----ILGKVSIA--V 113
Query: 507 ASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIG 566
L YL I H D+KPSN+L++ + DFG++ L + +++
Sbjct: 114 IKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID---------SMANS 162
Query: 567 LKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRP 605
G+ Y+ PE + G S+ DI+S G+ L+EM G+ P
Sbjct: 163 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 101/231 (43%), Gaps = 44/231 (19%)
Query: 391 FSKENLIGTGSFGSVYKGTLGD-GTIVAIKVLKL----------QQQGALKSFIDECNAL 439
F+K + IG GSFG VYKG +VAIK++ L QQ+ + + +C++
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITV---LSQCDSP 77
Query: 440 KSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQR 499
TR+ + S L ++ E++ G+ L P P E ++ I R
Sbjct: 78 YITRYFG-----SYLKSTKL------WIIMEYLGGGSALDLLKPGPLEETY---IATILR 123
Query: 500 LNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSK 559
++ LDYLH H D+K +NVLL + + DFG+A +++D K
Sbjct: 124 -----EILKGLDYLHSERKI---HRDIKAANVLLSEQGDVKLADFGVAG---QLTDTQIK 172
Query: 560 NQTVSIGLKGSIGYIPPEHM-NGQVSILGDIYSYGILLLEMFTGKRPTGDM 609
G+ ++ PE + DI+S GI +E+ G+ P D+
Sbjct: 173 RNXFV----GTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDL 219
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 97/227 (42%), Gaps = 21/227 (9%)
Query: 388 TDNFSKENLIGTGSFGSVY-KGTLGDGTIVAIKVLKL---QQQGALKSFIDECNALKSTR 443
+D + ++G G V+ L D VA+KVL+ + F E +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 444 HRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIA 503
H I+ V + +V E++ L +H ++ + + +
Sbjct: 71 HPAIVAVYD-TGEAETPAGPLPYIVMEYVDGVTLRDIVHTE-------GPMTPKRAIEVI 122
Query: 504 IDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTV 563
D AL++ H + I H D+KP+N+++ V DFG+A+ + + + S QT
Sbjct: 123 ADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGN--SVTQTA 177
Query: 564 SIGLKGSIGYIPPEHMNGQ-VSILGDIYSYGILLLEMFTGKRP-TGD 608
++ G+ Y+ PE G V D+YS G +L E+ TG+ P TGD
Sbjct: 178 AV--IGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGD 222
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 102/226 (45%), Gaps = 29/226 (12%)
Query: 395 NLIGTGSFGSVYKGT-LGDGTIVAIKVLKL--QQQGALKSFIDECNALKS-TRHRNILRV 450
L+G G++G VYKG + G + AIKV+ + ++ +K E N LK + HRNI
Sbjct: 30 ELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQ---EINMLKKYSHHRNIATY 86
Query: 451 ITACSSVDLEGNDFK-ALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASA 509
A + G D + LV EF G++ + + + + ++ I R ++
Sbjct: 87 YGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICR-----EILRG 141
Query: 510 LDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKG 569
L +LH H + H D+K NVLL ++ + DFG++ L D + I G
Sbjct: 142 LSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQL----DRTVGRRNTFI---G 191
Query: 570 SIGYIPPEHM------NGQVSILGDIYSYGILLLEMFTGKRPTGDM 609
+ ++ PE + + D++S GI +EM G P DM
Sbjct: 192 TPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDM 237
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 104/235 (44%), Gaps = 38/235 (16%)
Query: 397 IGTGSFGSVYKGTLGDGTIVAIKVLKLQQQGALKSFIDECNALKST--RHRNILRVITAC 454
+G G +G V++G+ G VA+K+ + + KS+ E + RH NIL I A
Sbjct: 45 VGKGRYGEVWRGSW-QGENVAVKIFSSRDE---KSWFRETELYNTVMLRHENILGFI-AS 99
Query: 455 SSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLH 514
+ L+ + G+L +L Q L + L I + +AS L +LH
Sbjct: 100 DMTSRHSSTQLWLITHYHEMGSLYDYL--------QLTTLDTVSCLRIVLSIASGLAHLH 151
Query: 515 -----HHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKG 569
IAH DLK N+L+ K+ + D GLA + + S NQ + +G
Sbjct: 152 IEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA-----VMHSQSTNQ-LDVGNNP 205
Query: 570 SIG---YIPPEHMNGQVSI-------LGDIYSYGILLLEMFTGKRPTGDMFKDDF 614
+G Y+ PE ++ + + DI+++G++L E+ +R + +D+
Sbjct: 206 RVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV--ARRMVSNGIVEDY 258
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 97/227 (42%), Gaps = 21/227 (9%)
Query: 388 TDNFSKENLIGTGSFGSVY-KGTLGDGTIVAIKVLKL---QQQGALKSFIDECNALKSTR 443
+D + ++G G V+ L D VA+KVL+ + F E +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 444 HRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIA 503
H I+ V + +V E++ L +H ++ + + +
Sbjct: 71 HPAIVAVYD-TGEAETPAGPLPYIVMEYVDGVTLRDIVHTE-------GPMTPKRAIEVI 122
Query: 504 IDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTV 563
D AL++ H + I H D+KP+N+++ V DFG+A+ + + + S QT
Sbjct: 123 ADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGN--SVTQTA 177
Query: 564 SIGLKGSIGYIPPEHMNGQ-VSILGDIYSYGILLLEMFTGKRP-TGD 608
++ G+ Y+ PE G V D+YS G +L E+ TG+ P TGD
Sbjct: 178 AV--IGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGD 222
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 100/236 (42%), Gaps = 40/236 (16%)
Query: 389 DNFSKENLIGTGSFGSVYKGTLGDG-TIVAIKVLKLQQ-------------QGALKSFID 434
+++ K +G+G++G V +G + AIKV+K Q + + +
Sbjct: 36 ESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYN 95
Query: 435 ECNALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKL 494
E + LKS H NI+++ E + LV EF G L H K
Sbjct: 96 EISLLKSLDHPNIIKLFDV-----FEDKKYFYLVTEFYEGGEL---FEQIINRH----KF 143
Query: 495 SVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKD---MTAHVGDFGLAKFLF 551
NI + S + YLH H I H D+KP N+LL+ + + DFGL+ F
Sbjct: 144 DECDAANIMKQILSGICYLHKH---NIVHRDIKPENILLENKNSLLNIKIVDFGLSSFF- 199
Query: 552 EISDNPSKNQTVSIGLKGSIGYIPPEHMNGQVSILGDIYSYGILLLEMFTGKRPTG 607
SK+ + L G+ YI PE + + + D++S G+++ + G P G
Sbjct: 200 ------SKDYKLRDRL-GTAYYIAPEVLKKKYNEKCDVWSCGVIMYILLCGYPPFG 248
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 104/235 (44%), Gaps = 38/235 (16%)
Query: 397 IGTGSFGSVYKGTLGDGTIVAIKVLKLQQQGALKSFIDECNALKST--RHRNILRVITAC 454
+G G +G V++G+ G VA+K+ + + KS+ E + RH NIL I A
Sbjct: 16 VGKGRYGEVWRGSW-QGENVAVKIFSSRDE---KSWFRETELYNTVMLRHENILGFI-AS 70
Query: 455 SSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLH 514
+ L+ + G+L +L Q L + L I + +AS L +LH
Sbjct: 71 DMTSRHSSTQLWLITHYHEMGSLYDYL--------QLTTLDTVSCLRIVLSIASGLAHLH 122
Query: 515 -----HHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKG 569
IAH DLK N+L+ K+ + D GLA + + S NQ + +G
Sbjct: 123 IEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA-----VMHSQSTNQ-LDVGNNP 176
Query: 570 SIG---YIPPEHMNGQVSI-------LGDIYSYGILLLEMFTGKRPTGDMFKDDF 614
+G Y+ PE ++ + + DI+++G++L E+ +R + +D+
Sbjct: 177 RVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV--ARRMVSNGIVEDY 229
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 109/223 (48%), Gaps = 27/223 (12%)
Query: 390 NFSKENLIGTGSFGSVYKGT-LGDGTIVAIK--VLKLQQQGALKSFIDECNALKSTRHRN 446
+ K IG G+FG V+K G VA+K +++ +++G + + E L+ +H N
Sbjct: 19 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHEN 78
Query: 447 ILRVITACSSVDLEGNDFKA---LVFEFMSN---GNLDQWLHPSPAEHYQFKKLSVIQRL 500
++ +I C + N K LVF+F + G L L +F LS I+R
Sbjct: 79 VVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVL-------VKFT-LSEIKR- 129
Query: 501 NIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKN 560
+ + + L Y+H + I H D+K +NVL+ +D + DFGLA+ F ++ N N
Sbjct: 130 -VMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLAR-AFSLAKNSQPN 184
Query: 561 QTVSIGLKGSIGYIPPEHMNGQVSILG--DIYSYGILLLEMFT 601
+ + + ++ Y PPE + G+ D++ G ++ EM+T
Sbjct: 185 RYXNRVV--TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 104/235 (44%), Gaps = 38/235 (16%)
Query: 397 IGTGSFGSVYKGTLGDGTIVAIKVLKLQQQGALKSFIDECNALKST--RHRNILRVITAC 454
+G G +G V++G+ G VA+K+ + + KS+ E + RH NIL I A
Sbjct: 16 VGKGRYGEVWRGSW-QGENVAVKIFSSRDE---KSWFRETELYNTVMLRHENILGFI-AS 70
Query: 455 SSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLH 514
+ L+ + G+L +L Q L + L I + +AS L +LH
Sbjct: 71 DMTSRHSSTQLWLITHYHEMGSLYDYL--------QLTTLDTVSCLRIVLSIASGLAHLH 122
Query: 515 -----HHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKG 569
IAH DLK N+L+ K+ + D GLA + + S NQ + +G
Sbjct: 123 IEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA-----VMHSQSTNQ-LDVGNNP 176
Query: 570 SIG---YIPPEHMNGQVSI-------LGDIYSYGILLLEMFTGKRPTGDMFKDDF 614
+G Y+ PE ++ + + DI+++G++L E+ +R + +D+
Sbjct: 177 RVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV--ARRMVSNGIVEDY 229
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 96/231 (41%), Gaps = 38/231 (16%)
Query: 388 TDNFSKENLIGTGSFGSVY--KGTLGDGTIVAIKVLK------LQQQGALKSFIDECNAL 439
+D + + +G+G++G V K L G AIK++K GAL +DE L
Sbjct: 20 SDRYQRVKKLGSGAYGEVLLCKDKL-TGAERAIKIIKKSSVTTTSNSGAL---LDEVAVL 75
Query: 440 KSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQR 499
K H NI+++ E LV E G L E +K S +
Sbjct: 76 KQLDHPNIMKLYEF-----FEDKRNYYLVMEVYRGGELFD-------EIILRQKFSEVDA 123
Query: 500 LNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLD---KDMTAHVGDFGLAKFLFEISDN 556
I V S YLH H I H DLKP N+LL+ +D + DFGL+ FE+
Sbjct: 124 AVIMKQVLSGTTYLHKH---NIVHRDLKPENLLLESKSRDALIKIVDFGLSAH-FEVGGK 179
Query: 557 PSKNQTVSIGLKGSIGYIPPEHMNGQVSILGDIYSYGILLLEMFTGKRPTG 607
+ G+ YI PE + + D++S G++L + G P G
Sbjct: 180 MKERL-------GTAYYIAPEVLRKKYDEKCDVWSCGVILYILLCGYPPFG 223
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 102/225 (45%), Gaps = 31/225 (13%)
Query: 389 DNFSKENLIGTGSFGSVYKGTLGD-GTIVAIKVLKLQ---QQGALKSFIDECNALKSTRH 444
D+F IG GSFG V D + A+K + Q ++ +++ E ++ H
Sbjct: 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEH 74
Query: 445 RNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAI 504
+ + S E + F +V + + G+L L ++ FK+ +V +L I
Sbjct: 75 PFL---VNLWYSFQDEEDMF--MVVDLLLGGDLRYHLQ----QNVHFKEETV--KLFIC- 122
Query: 505 DVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVS 564
++ ALDYL + I H D+KP N+LLD+ H+ DF +A L P + Q +
Sbjct: 123 ELVMALDYLQ---NQRIIHRDMKPDNILLDEHGHVHITDFNIAAML------PRETQITT 173
Query: 565 IGLKGSIGYIPPEHMNGQ----VSILGDIYSYGILLLEMFTGKRP 605
+ G+ Y+ PE + + S D +S G+ E+ G+RP
Sbjct: 174 MA--GTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRP 216
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 98/219 (44%), Gaps = 24/219 (10%)
Query: 390 NFSKENLIGTGSFGSVYKGTLGD-GTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNIL 448
+++ +IG GSFG VY+ L D G +VAIK K+ Q A K+ E ++ H NI+
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQGKAFKN--RELQIMRKLDHCNIV 76
Query: 449 RV-ITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVA 507
R+ SS + + + LV +++ H S A+ + L VI +
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK----QTLPVIYVKLYMYQLF 132
Query: 508 SALDYLHHHCDTPIAHCDLKPSNVLLDKDMTA-HVGDFGLAKFLFEISDNPSKNQTVSIG 566
+L Y+H I H D+KP N+LLD D + DFG AK L N +
Sbjct: 133 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--------VS 181
Query: 567 LKGSIGYIPPEHMNGQVSILG--DIYSYGILLLEMFTGK 603
S Y PE + G D++S G +L E+ G+
Sbjct: 182 YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 98/219 (44%), Gaps = 24/219 (10%)
Query: 390 NFSKENLIGTGSFGSVYKGTLGD-GTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNIL 448
+++ +IG GSFG VY+ L D G +VAIK K+ Q A K+ E ++ H NI+
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQGKAFKN--RELQIMRKLDHCNIV 76
Query: 449 RV-ITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVA 507
R+ SS + + + LV +++ H S A+ + L VI +
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK----QTLPVIYVKLYMYQLF 132
Query: 508 SALDYLHHHCDTPIAHCDLKPSNVLLDKDMTA-HVGDFGLAKFLFEISDNPSKNQTVSIG 566
+L Y+H I H D+KP N+LLD D + DFG AK L N +
Sbjct: 133 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--------VS 181
Query: 567 LKGSIGYIPPEHMNGQVSILG--DIYSYGILLLEMFTGK 603
S Y PE + G D++S G +L E+ G+
Sbjct: 182 YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 100/225 (44%), Gaps = 38/225 (16%)
Query: 397 IGTGSFGSVYKG------TLGDGTIVAIKVLKLQQQGALKSFIDECNALKST-------- 442
+G G+FG V + VA+K+LK +GA S E AL S
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLK---EGATHS---EHRALMSELKILIHIG 88
Query: 443 RHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKL-----SVI 497
H N++ ++ AC+ G +V EF GNL +L E +K L ++
Sbjct: 89 HHLNVVNLLGACTK---PGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLE 144
Query: 498 QRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNP 557
+ + VA +++L H DL N+LL + + DFGLA+ +++ D
Sbjct: 145 HLIXYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYV 201
Query: 558 SKNQTVSIGLKGSIGYIPPEHMNGQV-SILGDIYSYGILLLEMFT 601
K + + ++ PE + +V +I D++S+G+LL E+F+
Sbjct: 202 RKGDA-----RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 104/231 (45%), Gaps = 45/231 (19%)
Query: 397 IGTGSFGSVY--------KGTLGDGTIVAIKVLKLQQ-QGALKSFIDECNALKST-RHRN 446
+G G+FG V K + VA+K+LK + L + E +K +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 447 ILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPS--------------PAEHYQFK 492
I+ ++ AC+ +G + ++ + S GNL ++L P E FK
Sbjct: 103 IINLLGACTQ---DGPLY--VIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 493 KLSVIQRLNIAIDVASALDYL-HHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLF 551
L ++ +A ++YL C H DL NVL+ ++ + DFGLA+ +
Sbjct: 158 DL-----VSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDIN 208
Query: 552 EISDNPSKNQTVSIGLKGSIGYIPPEHMNGQV-SILGDIYSYGILLLEMFT 601
I D K + +K ++ PE + +V + D++S+G+L+ E+FT
Sbjct: 209 NI-DYYKKTTNGRLPVK----WMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 109/223 (48%), Gaps = 27/223 (12%)
Query: 390 NFSKENLIGTGSFGSVYKGT-LGDGTIVAIK--VLKLQQQGALKSFIDECNALKSTRHRN 446
+ K IG G+FG V+K G VA+K +++ +++G + + E L+ +H N
Sbjct: 18 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHEN 77
Query: 447 ILRVITACSSVDLEGNDFKA---LVFEFMSN---GNLDQWLHPSPAEHYQFKKLSVIQRL 500
++ +I C + N K LVF+F + G L L +F LS I+R
Sbjct: 78 VVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVL-------VKFT-LSEIKR- 128
Query: 501 NIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKN 560
+ + + L Y+H + I H D+K +NVL+ +D + DFGLA+ F ++ N N
Sbjct: 129 -VMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLAR-AFSLAKNSQPN 183
Query: 561 QTVSIGLKGSIGYIPPEHMNGQVSILG--DIYSYGILLLEMFT 601
+ + + ++ Y PPE + G+ D++ G ++ EM+T
Sbjct: 184 RYXNRVV--TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 224
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 109/223 (48%), Gaps = 27/223 (12%)
Query: 390 NFSKENLIGTGSFGSVYKGT-LGDGTIVAIK--VLKLQQQGALKSFIDECNALKSTRHRN 446
+ K IG G+FG V+K G VA+K +++ +++G + + E L+ +H N
Sbjct: 19 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHEN 78
Query: 447 ILRVITACSSVDLEGNDFKA---LVFEFMSN---GNLDQWLHPSPAEHYQFKKLSVIQRL 500
++ +I C + N K LVF+F + G L L +F LS I+R+
Sbjct: 79 VVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVL-------VKFT-LSEIKRV 130
Query: 501 NIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKN 560
+ + L Y+H + I H D+K +NVL+ +D + DFGLA+ F ++ N N
Sbjct: 131 MQML--LNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLAR-AFSLAKNSQPN 184
Query: 561 QTVSIGLKGSIGYIPPEHMNGQVSILG--DIYSYGILLLEMFT 601
+ + + ++ Y PPE + G+ D++ G ++ EM+T
Sbjct: 185 RYXNRVV--TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 74/145 (51%), Gaps = 19/145 (13%)
Query: 467 LVFEFMSNGNL---DQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAH 523
+++E+M N ++ D++ + F + VI+ I V ++ Y+H+ + I H
Sbjct: 120 IIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIK--CIIKSVLNSFSYIHN--EKNICH 175
Query: 524 CDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNGQV 583
D+KPSN+L+DK+ + DFG ++++ D K G +G+ ++PPE + +
Sbjct: 176 RDVKPSNILMDKNGRVKLSDFGESEYMV---DKKIK------GSRGTYEFMPPEFFSNES 226
Query: 584 SILG---DIYSYGILLLEMFTGKRP 605
S G DI+S GI L MF P
Sbjct: 227 SYNGAKVDIWSLGICLYVMFYNVVP 251
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 96/231 (41%), Gaps = 38/231 (16%)
Query: 388 TDNFSKENLIGTGSFGSVY--KGTLGDGTIVAIKVLK------LQQQGALKSFIDECNAL 439
+D + + +G+G++G V K L G AIK++K GAL +DE L
Sbjct: 3 SDRYQRVKKLGSGAYGEVLLCKDKLT-GAERAIKIIKKSSVTTTSNSGAL---LDEVAVL 58
Query: 440 KSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQR 499
K H NI+++ E LV E G L E +K S +
Sbjct: 59 KQLDHPNIMKLYEF-----FEDKRNYYLVMEVYRGGEL-------FDEIILRQKFSEVDA 106
Query: 500 LNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLD---KDMTAHVGDFGLAKFLFEISDN 556
I V S YLH H I H DLKP N+LL+ +D + DFGL+ FE+
Sbjct: 107 AVIMKQVLSGTTYLHKH---NIVHRDLKPENLLLESKSRDALIKIVDFGLSAH-FEVGGK 162
Query: 557 PSKNQTVSIGLKGSIGYIPPEHMNGQVSILGDIYSYGILLLEMFTGKRPTG 607
+ G+ YI PE + + D++S G++L + G P G
Sbjct: 163 MKERL-------GTAYYIAPEVLRKKYDEKCDVWSCGVILYILLCGYPPFG 206
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 101/221 (45%), Gaps = 30/221 (13%)
Query: 397 IGTGSFGSVYKGTLGDGTIVAI-KVLKLQQQGALKSFIDECNALKSTRHRNILRVITACS 455
+G G+FG VYK + +++A KV+ + + L+ ++ E + L S H NI++++ A
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 456 SVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKK-LSVIQRLNIAIDVASALDYLH 514
E N + ++ EF + G +D A + ++ L+ Q + AL+YLH
Sbjct: 105 ---YENNLW--ILIEFCAGGAVD-------AVMLELERPLTESQIQVVCKQTLDALNYLH 152
Query: 515 HHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYI 574
D I H DLK N+L D + DFG +S ++ G+ ++
Sbjct: 153 ---DNKIIHRDLKAGNILFTLDGDIKLADFG-------VSAKNTRTIQRRDSFIGTPYWM 202
Query: 575 PPEHMNGQVS------ILGDIYSYGILLLEMFTGKRPTGDM 609
PE + + S D++S GI L+EM + P ++
Sbjct: 203 APEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHEL 243
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 98/219 (44%), Gaps = 24/219 (10%)
Query: 390 NFSKENLIGTGSFGSVYKGTLGD-GTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNIL 448
+++ +IG GSFG VY+ L D G +VAIK K+ Q A K+ E ++ H NI+
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQGKAFKN--RELQIMRKLDHCNIV 76
Query: 449 RV-ITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVA 507
R+ SS + + + LV +++ H S A+ + L VI +
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAK----QTLPVIYVKLYMYQLF 132
Query: 508 SALDYLHHHCDTPIAHCDLKPSNVLLDKDMTA-HVGDFGLAKFLFEISDNPSKNQTVSIG 566
+L Y+H I H D+KP N+LLD D + DFG AK L N +
Sbjct: 133 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--------VS 181
Query: 567 LKGSIGYIPPEHMNGQVSILG--DIYSYGILLLEMFTGK 603
S Y PE + G D++S G +L E+ G+
Sbjct: 182 XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 107/220 (48%), Gaps = 27/220 (12%)
Query: 397 IGTGSFGSVYKGTL---GDGTIVAIKVLKLQQQG-ALK-SFIDECNALKSTRHRNILRVI 451
+G+G+FG+V KG VA+K+LK + ALK + E N ++ + I+R+I
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 452 TACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALD 511
C + LV E G L+++L ++ K ++I+ ++ V+ +
Sbjct: 79 GICEAESW------MLVMEMAELGPLNKYLQ----QNRHVKDKNIIELVH---QVSMGMK 125
Query: 512 YLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSI 571
YL ++ H DL NVLL A + DFGL+K L +N K QT K +
Sbjct: 126 YLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL-RADENXYKAQTHG---KWPV 178
Query: 572 GYIPPEHMN-GQVSILGDIYSYGILLLEMFT-GKRPTGDM 609
+ PE +N + S D++S+G+L+ E F+ G++P M
Sbjct: 179 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM 218
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 87/198 (43%), Gaps = 20/198 (10%)
Query: 416 VAIKVLKL---QQQGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFKALVFEFM 472
VA+KVL+ + F E + H I+ + A + +V E++
Sbjct: 40 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIV-AVYATGEAETPAGPLPYIVMEYV 98
Query: 473 SNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVL 532
L +H ++ + + + D AL++ H + I H D+KP+N++
Sbjct: 99 DGVTLRDIVHTE-------GPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIM 148
Query: 533 LDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNGQ-VSILGDIYS 591
+ V DFG+A+ + + + S QT ++ G+ Y+ PE G V D+YS
Sbjct: 149 ISATNAVKVMDFGIARAIADSGN--SVTQTAAV--IGTAQYLSPEQARGDSVDARSDVYS 204
Query: 592 YGILLLEMFTGKRP-TGD 608
G +L E+ TG+ P TGD
Sbjct: 205 LGCVLYEVLTGEPPFTGD 222
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 101/221 (45%), Gaps = 30/221 (13%)
Query: 397 IGTGSFGSVYKGTLGDGTIVAI-KVLKLQQQGALKSFIDECNALKSTRHRNILRVITACS 455
+G G+FG VYK + +++A KV+ + + L+ ++ E + L S H NI++++ A
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 456 SVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKK-LSVIQRLNIAIDVASALDYLH 514
E N + ++ EF + G +D A + ++ L+ Q + AL+YLH
Sbjct: 105 ---YENNLW--ILIEFCAGGAVD-------AVMLELERPLTESQIQVVCKQTLDALNYLH 152
Query: 515 HHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYI 574
D I H DLK N+L D + DFG +S ++ G+ ++
Sbjct: 153 ---DNKIIHRDLKAGNILFTLDGDIKLADFG-------VSAKNTRXIQRRDSFIGTPYWM 202
Query: 575 PPEHMNGQVS------ILGDIYSYGILLLEMFTGKRPTGDM 609
PE + + S D++S GI L+EM + P ++
Sbjct: 203 APEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHEL 243
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 104/231 (45%), Gaps = 45/231 (19%)
Query: 397 IGTGSFGSVY--------KGTLGDGTIVAIKVLKLQQ-QGALKSFIDECNALKST-RHRN 446
+G G+FG V K + VA+K+LK + L + E +K +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 447 ILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPS--------------PAEHYQFK 492
I+ ++ AC+ +G + ++ + S GNL ++L P E FK
Sbjct: 103 IINLLGACTQ---DGPLY--VIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 493 KLSVIQRLNIAIDVASALDYL-HHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLF 551
L ++ +A ++YL C H DL NVL+ ++ + DFGLA+ +
Sbjct: 158 DL-----VSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDIN 208
Query: 552 EISDNPSKNQTVSIGLKGSIGYIPPEHMNGQV-SILGDIYSYGILLLEMFT 601
I D K + +K ++ PE + +V + D++S+G+L+ E+FT
Sbjct: 209 NI-DYYKKTTNGRLPVK----WMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 96/236 (40%), Gaps = 48/236 (20%)
Query: 393 KENLIGTGSFGSVY-------KGTLGDGTIVAIKVLKLQQQGALK-------------SF 432
+ENL G+F Y KG+ G+ ++ K QQ+ A+K +
Sbjct: 11 RENLYFQGTFAERYNIVCMLGKGSFGE--VLKCKDRITQQEYAVKVINKASAKNKDTSTI 68
Query: 433 IDECNALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFK 492
+ E LK H NI+++ LE + +V E + G L E + K
Sbjct: 69 LREVELLKKLDHPNIMKLFEI-----LEDSSSFYIVGELYTGGEL-------FDEIIKRK 116
Query: 493 KLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLD---KDMTAHVGDFGLAKF 549
+ S I V S + Y+H H I H DLKP N+LL+ KD + DFGL+
Sbjct: 117 RFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTC 173
Query: 550 LFEISDNPSKNQTVSIGLKGSIGYIPPEHMNGQVSILGDIYSYGILLLEMFTGKRP 605
+ T G+ YI PE + G D++S G++L + +G P
Sbjct: 174 F--------QQNTKMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPP 221
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 107/220 (48%), Gaps = 27/220 (12%)
Query: 397 IGTGSFGSVYKGTL---GDGTIVAIKVLKLQQQG-ALK-SFIDECNALKSTRHRNILRVI 451
+G+G+FG+V KG VA+K+LK + ALK + E N ++ + I+R+I
Sbjct: 25 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 84
Query: 452 TACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALD 511
C + LV E G L+++L ++ K ++I+ ++ V+ +
Sbjct: 85 GICEAESW------MLVMEMAELGPLNKYLQ----QNRHVKDKNIIELVH---QVSMGMK 131
Query: 512 YLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSI 571
YL ++ H DL NVLL A + DFGL+K L +N K QT K +
Sbjct: 132 YLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL-RADENYYKAQTHG---KWPV 184
Query: 572 GYIPPEHMN-GQVSILGDIYSYGILLLEMFT-GKRPTGDM 609
+ PE +N + S D++S+G+L+ E F+ G++P M
Sbjct: 185 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM 224
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 105/232 (45%), Gaps = 33/232 (14%)
Query: 384 ISKSTDNFSKENLIGTGSFGSVYKGT-LGDGT----IVAIKVLKLQQQ-GALKSFIDECN 437
I K T+ K ++G+G+FG+VYKG + DG VAIKVL+ A K +DE
Sbjct: 13 ILKETE-LRKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAY 71
Query: 438 ALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKK--LS 495
+ + R++ C + ++ LV + M G L +H + + L
Sbjct: 72 VMAGVGSPYVSRLLGICLTSTVQ------LVTQLMPYGCL--------LDHVRENRGRLG 117
Query: 496 VIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISD 555
LN + +A + YL D + H DL NVL+ + DFGLA+ L
Sbjct: 118 SQDLLNWCMQIAKGMSYLE---DVRLVHRDLAARNVLVKSPNHVKITDFGLARLL----- 169
Query: 556 NPSKNQTVSIGLKGSIGYIPPEH-MNGQVSILGDIYSYGILLLEMFT-GKRP 605
+ + + + G K I ++ E + + + D++SYG+ + E+ T G +P
Sbjct: 170 DIDETEYHADGGKVPIKWMALESILRRRFTHQSDVWSYGVTVWELMTFGAKP 221
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 100/225 (44%), Gaps = 38/225 (16%)
Query: 397 IGTGSFGSVYKG------TLGDGTIVAIKVLKLQQQGALKSFIDECNALKST-------- 442
+G G+FG V + VA+K+LK +GA S E AL S
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLK---EGATHS---EHRALMSELKILIHIG 88
Query: 443 RHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKL-----SVI 497
H N++ ++ AC+ G +V EF GNL +L E +K L ++
Sbjct: 89 HHLNVVNLLGACTK---PGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLE 144
Query: 498 QRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNP 557
+ + VA +++L H DL N+LL + + DFGLA+ +++ D
Sbjct: 145 HLICYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYV 201
Query: 558 SKNQTVSIGLKGSIGYIPPEHMNGQV-SILGDIYSYGILLLEMFT 601
K + + ++ PE + +V +I D++S+G+LL E+F+
Sbjct: 202 RKGDA-----RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 102/231 (44%), Gaps = 47/231 (20%)
Query: 390 NFSKENLIGTGSFGSVYKGTLGDG-TIVAIKVLKLQQ--QGALKSFIDECNALKSTRHRN 446
+ K IG G++G+V+K + IVA+K ++L +G S + E LK +H+N
Sbjct: 3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKN 62
Query: 447 ILRVITACSSVDLEGNDFKALVFEFMS----------NGNLDQWLHPSPAEHYQFKKLSV 496
I+R+ L + LVFEF NG+LD P + + F+ L
Sbjct: 63 IVRLHDV-----LHSDKKLTLVFEFCDQDLKKYFDSCNGDLD----PEIVKSFLFQLLK- 112
Query: 497 IQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDN 556
L + H + H DLKP N+L++++ + DFGLA+ F I
Sbjct: 113 ------------GLGFCHSR---NVLHRDLKPQNLLINRNGELKLADFGLAR-AFGI--- 153
Query: 557 PSKNQTVSIGLKGSIGYIPPEHMNGQ--VSILGDIYSYGILLLEMFTGKRP 605
P + + + ++ Y PP+ + G S D++S G + E+ RP
Sbjct: 154 PVRCYSAEV---VTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAARP 201
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 107/220 (48%), Gaps = 27/220 (12%)
Query: 397 IGTGSFGSVYKGTL---GDGTIVAIKVLKLQQQG-ALK-SFIDECNALKSTRHRNILRVI 451
+G+G+FG+V KG VA+K+LK + ALK + E N ++ + I+R+I
Sbjct: 13 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 72
Query: 452 TACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALD 511
C + LV E G L+++L ++ K ++I+ ++ V+ +
Sbjct: 73 GICEAESW------MLVMEMAELGPLNKYLQ----QNRHVKDKNIIELVH---QVSMGMK 119
Query: 512 YLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSI 571
YL ++ H DL NVLL A + DFGL+K L +N K QT K +
Sbjct: 120 YLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL-RADENYYKAQTHG---KWPV 172
Query: 572 GYIPPEHMN-GQVSILGDIYSYGILLLEMFT-GKRPTGDM 609
+ PE +N + S D++S+G+L+ E F+ G++P M
Sbjct: 173 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM 212
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 107/230 (46%), Gaps = 30/230 (13%)
Query: 388 TDNFSKENLIGTGSFGSVYKGTLGD-GTIVAIKVLKLQQQG--ALKSFIDECNALKSTRH 444
+ +F ++L+G G++G V T G IVAIK ++ + AL++ + E LK +H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRT-LREIKILKHFKH 68
Query: 445 RNILRVITACSSVDLEGNDFKALVFEFMSNG----NLDQWLHPSPAEHYQFKKLSVIQRL 500
NI+ + E + ++ E M Q L +++ ++ L ++ L
Sbjct: 69 ENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVL 128
Query: 501 NIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFE-ISDN--P 557
+ + + H DLKPSN+L++ + V DFGLA+ + E +DN P
Sbjct: 129 H----------------GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEP 172
Query: 558 SKNQTVSIGLKGSIGYIPPEHM--NGQVSILGDIYSYGILLLEMFTGKRP 605
+ Q+ + + Y PE M + + S D++S G +L E+F +RP
Sbjct: 173 TGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRP 221
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 107/220 (48%), Gaps = 27/220 (12%)
Query: 397 IGTGSFGSVYKGTLG---DGTIVAIKVLKLQQQG-ALK-SFIDECNALKSTRHRNILRVI 451
+G+G+FG+V KG VA+K+LK + ALK + E N ++ + I+R+I
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 452 TACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALD 511
C + LV E G L+++L ++ K ++I+ ++ V+ +
Sbjct: 95 GICEAESW------MLVMEMAELGPLNKYLQ----QNRHVKDKNIIELVH---QVSMGMK 141
Query: 512 YLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSI 571
YL ++ H DL NVLL A + DFGL+K L +N K QT K +
Sbjct: 142 YLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL-RADENYYKAQTHG---KWPV 194
Query: 572 GYIPPEHMN-GQVSILGDIYSYGILLLEMFT-GKRPTGDM 609
+ PE +N + S D++S+G+L+ E F+ G++P M
Sbjct: 195 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM 234
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 107/220 (48%), Gaps = 27/220 (12%)
Query: 397 IGTGSFGSVYKGTLG---DGTIVAIKVLKLQQQG-ALK-SFIDECNALKSTRHRNILRVI 451
+G+G+FG+V KG VA+K+LK + ALK + E N ++ + I+R+I
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 452 TACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALD 511
C + LV E G L+++L ++ K ++I+ ++ V+ +
Sbjct: 95 GICEAESW------MLVMEMAELGPLNKYLQ----QNRHVKDKNIIELVH---QVSMGMK 141
Query: 512 YLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSI 571
YL ++ H DL NVLL A + DFGL+K L +N K QT K +
Sbjct: 142 YLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL-RADENYYKAQTHG---KWPV 194
Query: 572 GYIPPEHMN-GQVSILGDIYSYGILLLEMFT-GKRPTGDM 609
+ PE +N + S D++S+G+L+ E F+ G++P M
Sbjct: 195 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM 234
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 107/220 (48%), Gaps = 27/220 (12%)
Query: 397 IGTGSFGSVYKGTL---GDGTIVAIKVLKLQQQG-ALK-SFIDECNALKSTRHRNILRVI 451
+G+G+FG+V KG VA+K+LK + ALK + E N ++ + I+R+I
Sbjct: 15 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 74
Query: 452 TACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALD 511
C + LV E G L+++L ++ K ++I+ ++ V+ +
Sbjct: 75 GICEAESW------MLVMEMAELGPLNKYLQ----QNRHVKDKNIIELVH---QVSMGMK 121
Query: 512 YLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSI 571
YL ++ H DL NVLL A + DFGL+K L +N K QT K +
Sbjct: 122 YLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL-RADENYYKAQTHG---KWPV 174
Query: 572 GYIPPEHMN-GQVSILGDIYSYGILLLEMFT-GKRPTGDM 609
+ PE +N + S D++S+G+L+ E F+ G++P M
Sbjct: 175 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM 214
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 97/219 (44%), Gaps = 24/219 (10%)
Query: 390 NFSKENLIGTGSFGSVYKGTLGD-GTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNIL 448
+++ +IG GSFG VY+ L D G +VAIK K+ Q K+ E ++ H NI+
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--RELQIMRKLDHCNIV 76
Query: 449 RV-ITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVA 507
R+ SS + + + LV +++ H S A+ + L VI +
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK----QTLPVIYVKLYMYQLF 132
Query: 508 SALDYLHHHCDTPIAHCDLKPSNVLLDKDMTA-HVGDFGLAKFLFEISDNPSKNQTVSIG 566
+L Y+H I H D+KP N+LLD D + DFG AK L N +
Sbjct: 133 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--------VS 181
Query: 567 LKGSIGYIPPEHMNGQVSILG--DIYSYGILLLEMFTGK 603
S Y PE + G D++S G +L E+ G+
Sbjct: 182 YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 107/220 (48%), Gaps = 27/220 (12%)
Query: 397 IGTGSFGSVYKGTL---GDGTIVAIKVLKLQQQG-ALK-SFIDECNALKSTRHRNILRVI 451
+G+G+FG+V KG VA+K+LK + ALK + E N ++ + I+R+I
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 452 TACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALD 511
C + LV E G L+++L ++ K ++I+ ++ V+ +
Sbjct: 79 GICEAESW------MLVMEMAELGPLNKYLQ----QNRHVKDKNIIELVH---QVSMGMK 125
Query: 512 YLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSI 571
YL ++ H DL NVLL A + DFGL+K L +N K QT K +
Sbjct: 126 YLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL-RADENYYKAQTHG---KWPV 178
Query: 572 GYIPPEHMN-GQVSILGDIYSYGILLLEMFT-GKRPTGDM 609
+ PE +N + S D++S+G+L+ E F+ G++P M
Sbjct: 179 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM 218
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 107/220 (48%), Gaps = 27/220 (12%)
Query: 397 IGTGSFGSVYKGTL---GDGTIVAIKVLKLQQQG-ALK-SFIDECNALKSTRHRNILRVI 451
+G+G+FG+V KG VA+K+LK + ALK + E N ++ + I+R+I
Sbjct: 33 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 92
Query: 452 TACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALD 511
C + LV E G L+++L ++ K ++I+ ++ V+ +
Sbjct: 93 GICEAESW------MLVMEMAELGPLNKYLQ----QNRHVKDKNIIELVH---QVSMGMK 139
Query: 512 YLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSI 571
YL ++ H DL NVLL A + DFGL+K L +N K QT K +
Sbjct: 140 YLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL-RADENYYKAQTHG---KWPV 192
Query: 572 GYIPPEHMN-GQVSILGDIYSYGILLLEMFT-GKRPTGDM 609
+ PE +N + S D++S+G+L+ E F+ G++P M
Sbjct: 193 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM 232
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 97/219 (44%), Gaps = 24/219 (10%)
Query: 390 NFSKENLIGTGSFGSVYKGTLGD-GTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNIL 448
+++ +IG GSFG VY+ L D G +VAIK K+ Q K+ E ++ H NI+
Sbjct: 22 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--RELQIMRKLDHCNIV 77
Query: 449 RV-ITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVA 507
R+ SS + + + LV +++ H S A+ + L VI +
Sbjct: 78 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK----QTLPVIYVKLYMYQLF 133
Query: 508 SALDYLHHHCDTPIAHCDLKPSNVLLDKDMTA-HVGDFGLAKFLFEISDNPSKNQTVSIG 566
+L Y+H I H D+KP N+LLD D + DFG AK L N +
Sbjct: 134 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--------VS 182
Query: 567 LKGSIGYIPPEHMNGQVSILG--DIYSYGILLLEMFTGK 603
S Y PE + G D++S G +L E+ G+
Sbjct: 183 XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 221
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 97/219 (44%), Gaps = 24/219 (10%)
Query: 390 NFSKENLIGTGSFGSVYKGTLGD-GTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNIL 448
+++ +IG GSFG VY+ L D G +VAIK K+ Q K+ E ++ H NI+
Sbjct: 25 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--RELQIMRKLDHCNIV 80
Query: 449 RV-ITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVA 507
R+ SS + + + LV +++ H S A+ + L VI +
Sbjct: 81 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK----QTLPVIYVKLYMYQLF 136
Query: 508 SALDYLHHHCDTPIAHCDLKPSNVLLDKDMTA-HVGDFGLAKFLFEISDNPSKNQTVSIG 566
+L Y+H I H D+KP N+LLD D + DFG AK L N +
Sbjct: 137 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--------VS 185
Query: 567 LKGSIGYIPPEHMNGQVSILG--DIYSYGILLLEMFTGK 603
S Y PE + G D++S G +L E+ G+
Sbjct: 186 XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 224
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 97/219 (44%), Gaps = 24/219 (10%)
Query: 390 NFSKENLIGTGSFGSVYKGTLGD-GTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNIL 448
+++ +IG GSFG VY+ L D G +VAIK K+ Q K+ E ++ H NI+
Sbjct: 34 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--RELQIMRKLDHCNIV 89
Query: 449 RV-ITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVA 507
R+ SS + + + LV +++ H S A+ + L VI +
Sbjct: 90 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK----QTLPVIYVKLYMYQLF 145
Query: 508 SALDYLHHHCDTPIAHCDLKPSNVLLDKDMTA-HVGDFGLAKFLFEISDNPSKNQTVSIG 566
+L Y+H I H D+KP N+LLD D + DFG AK L N +
Sbjct: 146 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--------VS 194
Query: 567 LKGSIGYIPPEHMNGQVSILG--DIYSYGILLLEMFTGK 603
S Y PE + G D++S G +L E+ G+
Sbjct: 195 YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 233
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 97/219 (44%), Gaps = 24/219 (10%)
Query: 390 NFSKENLIGTGSFGSVYKGTLGD-GTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNIL 448
+++ +IG GSFG VY+ L D G +VAIK K+ Q K+ E ++ H NI+
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--RELQIMRKLDHCNIV 76
Query: 449 RV-ITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVA 507
R+ SS + + + LV +++ H S A+ + L VI +
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK----QTLPVIYVKLYMYQLF 132
Query: 508 SALDYLHHHCDTPIAHCDLKPSNVLLDKDMTA-HVGDFGLAKFLFEISDNPSKNQTVSIG 566
+L Y+H I H D+KP N+LLD D + DFG AK L N +
Sbjct: 133 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--------VS 181
Query: 567 LKGSIGYIPPEHMNGQVSILG--DIYSYGILLLEMFTGK 603
S Y PE + G D++S G +L E+ G+
Sbjct: 182 XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 97/219 (44%), Gaps = 24/219 (10%)
Query: 390 NFSKENLIGTGSFGSVYKGTLGD-GTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNIL 448
+++ +IG GSFG VY+ L D G +VAIK K+ Q K+ E ++ H NI+
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--RELQIMRKLDHCNIV 76
Query: 449 RV-ITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVA 507
R+ SS + + + LV +++ H S A+ + L VI +
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK----QTLPVIYVKLYMYQLF 132
Query: 508 SALDYLHHHCDTPIAHCDLKPSNVLLDKDMTA-HVGDFGLAKFLFEISDNPSKNQTVSIG 566
+L Y+H I H D+KP N+LLD D + DFG AK L N +
Sbjct: 133 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--------VS 181
Query: 567 LKGSIGYIPPEHMNGQVSILG--DIYSYGILLLEMFTGK 603
S Y PE + G D++S G +L E+ G+
Sbjct: 182 XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 97/219 (44%), Gaps = 24/219 (10%)
Query: 390 NFSKENLIGTGSFGSVYKGTLGD-GTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNIL 448
+++ +IG GSFG VY+ L D G +VAIK K+ Q K+ E ++ H NI+
Sbjct: 26 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--RELQIMRKLDHCNIV 81
Query: 449 RV-ITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVA 507
R+ SS + + + LV +++ H S A+ + L VI +
Sbjct: 82 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK----QTLPVIYVKLYMYQLF 137
Query: 508 SALDYLHHHCDTPIAHCDLKPSNVLLDKDMTA-HVGDFGLAKFLFEISDNPSKNQTVSIG 566
+L Y+H I H D+KP N+LLD D + DFG AK L N +
Sbjct: 138 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--------VS 186
Query: 567 LKGSIGYIPPEHMNGQVSILG--DIYSYGILLLEMFTGK 603
S Y PE + G D++S G +L E+ G+
Sbjct: 187 YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 225
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 96/236 (40%), Gaps = 48/236 (20%)
Query: 393 KENLIGTGSFGSVY-------KGTLGDGTIVAIKVLKLQQQGALK-------------SF 432
+ENL G+F Y KG+ G+ ++ K QQ+ A+K +
Sbjct: 11 RENLYFQGTFAERYNIVCMLGKGSFGE--VLKCKDRITQQEYAVKVINKASAKNKDTSTI 68
Query: 433 IDECNALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFK 492
+ E LK H NI+++ LE + +V E + G L E + K
Sbjct: 69 LREVELLKKLDHPNIMKLFEI-----LEDSSSFYIVGELYTGGELFD-------EIIKRK 116
Query: 493 KLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLD---KDMTAHVGDFGLAKF 549
+ S I V S + Y+H H I H DLKP N+LL+ KD + DFGL+
Sbjct: 117 RFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTC 173
Query: 550 LFEISDNPSKNQTVSIGLKGSIGYIPPEHMNGQVSILGDIYSYGILLLEMFTGKRP 605
N + G+ YI PE + G D++S G++L + +G P
Sbjct: 174 F---QQNTKMKDRI-----GTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPP 221
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 96/236 (40%), Gaps = 48/236 (20%)
Query: 393 KENLIGTGSFGSVY-------KGTLGDGTIVAIKVLKLQQQGALK-------------SF 432
+ENL G+F Y KG+ G+ ++ K QQ+ A+K +
Sbjct: 11 RENLYFQGTFAERYNIVCMLGKGSFGE--VLKCKDRITQQEYAVKVINKASAKNKDTSTI 68
Query: 433 IDECNALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFK 492
+ E LK H NI+++ LE + +V E + G L E + K
Sbjct: 69 LREVELLKKLDHPNIMKLFEI-----LEDSSSFYIVGELYTGGELFD-------EIIKRK 116
Query: 493 KLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLD---KDMTAHVGDFGLAKF 549
+ S I V S + Y+H H I H DLKP N+LL+ KD + DFGL+
Sbjct: 117 RFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTC 173
Query: 550 LFEISDNPSKNQTVSIGLKGSIGYIPPEHMNGQVSILGDIYSYGILLLEMFTGKRP 605
N + G+ YI PE + G D++S G++L + +G P
Sbjct: 174 F---QQNTKMKDRI-----GTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPP 221
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 101/221 (45%), Gaps = 30/221 (13%)
Query: 397 IGTGSFGSVYKGTLGDGTIVAI-KVLKLQQQGALKSFIDECNALKSTRHRNILRVITACS 455
+G G+FG VYK + +++A KV+ + + L+ ++ E + L S H NI++++ A
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 456 SVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKK-LSVIQRLNIAIDVASALDYLH 514
E N + ++ EF + G +D A + ++ L+ Q + AL+YLH
Sbjct: 105 ---YENNLW--ILIEFCAGGAVD-------AVMLELERPLTESQIQVVCKQTLDALNYLH 152
Query: 515 HHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYI 574
D I H DLK N+L D + DFG +S ++ G+ ++
Sbjct: 153 ---DNKIIHRDLKAGNILFTLDGDIKLADFG-------VSAKNTRXIQRRDXFIGTPYWM 202
Query: 575 PPEHMNGQVS------ILGDIYSYGILLLEMFTGKRPTGDM 609
PE + + S D++S GI L+EM + P ++
Sbjct: 203 APEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHEL 243
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 101/219 (46%), Gaps = 28/219 (12%)
Query: 389 DNFSKENLIGTGSFGSVYKGTL-GDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNI 447
DNF K IG GS G V T+ G +VA+K + L++Q + +E ++ +H N+
Sbjct: 34 DNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV 90
Query: 448 LRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVA 507
+ + + L G++ +V EF+ G L + +++ Q + + V
Sbjct: 91 VEMYNSY----LVGDEL-WVVMEFLEGGAL--------TDIVTHTRMNEEQIAAVCLAVL 137
Query: 508 SALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGL 567
AL LH + H D+K ++LL D + DFG F ++S + + L
Sbjct: 138 QALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFG---FCAQVSKEVPRRKX----L 187
Query: 568 KGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRP 605
G+ ++ PE ++ DI+S GI+++EM G+ P
Sbjct: 188 VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 226
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 97/219 (44%), Gaps = 24/219 (10%)
Query: 390 NFSKENLIGTGSFGSVYKGTLGD-GTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNIL 448
+++ +IG GSFG VY+ L D G +VAIK K+ Q K+ E ++ H NI+
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--RELQIMRKLDHCNIV 88
Query: 449 RV-ITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVA 507
R+ SS + + + LV +++ H S A+ + L VI +
Sbjct: 89 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK----QTLPVIYVKLYMYQLF 144
Query: 508 SALDYLHHHCDTPIAHCDLKPSNVLLDKDMTA-HVGDFGLAKFLFEISDNPSKNQTVSIG 566
+L Y+H I H D+KP N+LLD D + DFG AK L N +
Sbjct: 145 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--------VS 193
Query: 567 LKGSIGYIPPEHMNGQVSILG--DIYSYGILLLEMFTGK 603
S Y PE + G D++S G +L E+ G+
Sbjct: 194 XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 97/219 (44%), Gaps = 24/219 (10%)
Query: 390 NFSKENLIGTGSFGSVYKGTLGD-GTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNIL 448
+++ +IG GSFG VY+ L D G +VAIK K+ Q K+ E ++ H NI+
Sbjct: 29 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--RELQIMRKLDHCNIV 84
Query: 449 RV-ITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVA 507
R+ SS + + + LV +++ H S A+ + L VI +
Sbjct: 85 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK----QTLPVIYVKLYMYQLF 140
Query: 508 SALDYLHHHCDTPIAHCDLKPSNVLLDKDMTA-HVGDFGLAKFLFEISDNPSKNQTVSIG 566
+L Y+H I H D+KP N+LLD D + DFG AK L N +
Sbjct: 141 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--------VS 189
Query: 567 LKGSIGYIPPEHMNGQVSILG--DIYSYGILLLEMFTGK 603
S Y PE + G D++S G +L E+ G+
Sbjct: 190 XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 228
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 97/219 (44%), Gaps = 24/219 (10%)
Query: 390 NFSKENLIGTGSFGSVYKGTLGD-GTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNIL 448
+++ +IG GSFG VY+ L D G +VAIK K+ Q K+ E ++ H NI+
Sbjct: 40 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--RELQIMRKLDHCNIV 95
Query: 449 RV-ITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVA 507
R+ SS + + + LV +++ H S A+ + L VI +
Sbjct: 96 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK----QTLPVIYVKLYMYQLF 151
Query: 508 SALDYLHHHCDTPIAHCDLKPSNVLLDKDMTA-HVGDFGLAKFLFEISDNPSKNQTVSIG 566
+L Y+H I H D+KP N+LLD D + DFG AK L N +
Sbjct: 152 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--------VS 200
Query: 567 LKGSIGYIPPEHMNGQVSILG--DIYSYGILLLEMFTGK 603
S Y PE + G D++S G +L E+ G+
Sbjct: 201 XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 239
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 107/220 (48%), Gaps = 27/220 (12%)
Query: 397 IGTGSFGSVYKGTL---GDGTIVAIKVLKLQQQG-ALK-SFIDECNALKSTRHRNILRVI 451
+G+G+FG+V KG VA+K+LK + ALK + E N ++ + I+R+I
Sbjct: 377 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 436
Query: 452 TACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALD 511
C + LV E G L+++L ++ K ++I+ ++ V+ +
Sbjct: 437 GICEAESW------MLVMEMAELGPLNKYLQ----QNRHVKDKNIIELVH---QVSMGMK 483
Query: 512 YLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSI 571
YL ++ H DL NVLL A + DFGL+K L +N K QT K +
Sbjct: 484 YLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL-RADENYYKAQTHG---KWPV 536
Query: 572 GYIPPEHMN-GQVSILGDIYSYGILLLEMFT-GKRPTGDM 609
+ PE +N + S D++S+G+L+ E F+ G++P M
Sbjct: 537 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM 576
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 101/219 (46%), Gaps = 28/219 (12%)
Query: 389 DNFSKENLIGTGSFGSVYKGTL-GDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNI 447
DNF K IG GS G V T+ G +VA+K + L++Q + +E ++ +H N+
Sbjct: 32 DNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV 88
Query: 448 LRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVA 507
+ + + L G++ +V EF+ G L + +++ Q + + V
Sbjct: 89 VEMYNSY----LVGDEL-WVVMEFLEGGAL--------TDIVTHTRMNEEQIAAVCLAVL 135
Query: 508 SALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGL 567
AL LH + H D+K ++LL D + DFG F ++S + + L
Sbjct: 136 QALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFG---FCAQVSKEVPRRKX----L 185
Query: 568 KGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRP 605
G+ ++ PE ++ DI+S GI+++EM G+ P
Sbjct: 186 VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 224
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 102/225 (45%), Gaps = 28/225 (12%)
Query: 383 DISKSTDNFSKENLIGTGSFGSVYKGTL-GDGTIVAIKVLKLQQQGALKSFIDECNALKS 441
D DNF K IG GS G V T+ G +VA+K + L++Q + +E ++
Sbjct: 71 DPRSYLDNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRD 127
Query: 442 TRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLN 501
+H N++ + + L G++ +V EF+ G L + +++ Q
Sbjct: 128 YQHENVVEMYNSY----LVGDEL-WVVMEFLEGGAL--------TDIVTHTRMNEEQIAA 174
Query: 502 IAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQ 561
+ + V AL LH + H D+K ++LL D + DFG F ++S + +
Sbjct: 175 VCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFG---FCAQVSKEVPRRK 228
Query: 562 TVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRP 605
L G+ ++ PE ++ DI+S GI+++EM G+ P
Sbjct: 229 X----LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 269
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 97/219 (44%), Gaps = 24/219 (10%)
Query: 390 NFSKENLIGTGSFGSVYKGTLGD-GTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNIL 448
+++ +IG GSFG VY+ L D G +VAIK K+ Q K+ E ++ H NI+
Sbjct: 100 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--RELQIMRKLDHCNIV 155
Query: 449 RV-ITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVA 507
R+ SS + + + LV +++ H S A+ + L VI +
Sbjct: 156 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK----QTLPVIYVKLYMYQLF 211
Query: 508 SALDYLHHHCDTPIAHCDLKPSNVLLDKDMTA-HVGDFGLAKFLFEISDNPSKNQTVSIG 566
+L Y+H I H D+KP N+LLD D + DFG AK L N +
Sbjct: 212 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--------VS 260
Query: 567 LKGSIGYIPPEHMNGQVSILG--DIYSYGILLLEMFTGK 603
S Y PE + G D++S G +L E+ G+
Sbjct: 261 YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 299
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 101/219 (46%), Gaps = 28/219 (12%)
Query: 389 DNFSKENLIGTGSFGSVYKGTL-GDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNI 447
DNF K IG GS G V T+ G +VA+K + L++Q + +E ++ +H N+
Sbjct: 23 DNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV 79
Query: 448 LRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVA 507
+ + + L G++ +V EF+ G L + +++ Q + + V
Sbjct: 80 VEMYNSY----LVGDEL-WVVMEFLEGGAL--------TDIVTHTRMNEEQIAAVCLAVL 126
Query: 508 SALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGL 567
AL LH + H D+K ++LL D + DFG F ++S + + L
Sbjct: 127 QALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFG---FCAQVSKEVPRRKX----L 176
Query: 568 KGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRP 605
G+ ++ PE ++ DI+S GI+++EM G+ P
Sbjct: 177 VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 215
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 98/220 (44%), Gaps = 26/220 (11%)
Query: 389 DNFSKENLIGTGSFGSVYK-GTLGDGTIVAIKVLKLQQQGALK-SFIDECNALKSTRHRN 446
D+F + + +G G+ G V K G I+A K++ L+ + A++ I E L
Sbjct: 16 DDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 75
Query: 447 ILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDV 506
I+ A S + ++ E M G+LDQ L + K++ ++I V
Sbjct: 76 IVGFYGAFYS-----DGEISICMEHMDGGSLDQVLK-------EAKRIPEEILGKVSIAV 123
Query: 507 ASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIG 566
L YL I H D+KPSN+L++ + DFG++ L + N
Sbjct: 124 LRGLAYLREKHQ--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN---------S 172
Query: 567 LKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRP 605
G+ Y+ PE + G S+ DI+S G+ L+E+ G+ P
Sbjct: 173 FVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYP 212
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 97/219 (44%), Gaps = 24/219 (10%)
Query: 390 NFSKENLIGTGSFGSVYKGTLGD-GTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNIL 448
+++ +IG GSFG VY+ L D G +VAIK K+ Q K+ E ++ H NI+
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--RELQIMRKLDHCNIV 88
Query: 449 RV-ITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVA 507
R+ SS + + + LV +++ H S A+ + L VI +
Sbjct: 89 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK----QTLPVIYVKLYMYQLF 144
Query: 508 SALDYLHHHCDTPIAHCDLKPSNVLLDKDMTA-HVGDFGLAKFLFEISDNPSKNQTVSIG 566
+L Y+H I H D+KP N+LLD D + DFG AK L N +
Sbjct: 145 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--------VS 193
Query: 567 LKGSIGYIPPEHMNGQVSILG--DIYSYGILLLEMFTGK 603
S Y PE + G D++S G +L E+ G+
Sbjct: 194 XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 96/237 (40%), Gaps = 40/237 (16%)
Query: 380 SYSDISKSTDNFSKENLIGTGSFGSVYKGT-LGDGTIVAIKVLKLQQ--QGALKSFIDEC 436
S +D N+ + IG G+F V + G VA+K++ Q +L+ E
Sbjct: 6 SATDEQPHIGNYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREV 65
Query: 437 NALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSV 496
+K H NI+++ +E LV E+ S G + +L H + K+
Sbjct: 66 RIMKILNHPNIVKLFEV-----IETEKTLYLVMEYASGGEVFDYL----VAHGRMKEKEA 116
Query: 497 IQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDN 556
+ + SA+ Y H I H DLK N+LLD DM + DFG +
Sbjct: 117 RAKFR---QIVSAVQYCHQKY---IVHRDLKAENLLLDGDMNIKIADFGFS--------- 161
Query: 557 PSKNQTVSIGLK-----GSIGYIPPEHMNGQVSILG---DIYSYGILLLEMFTGKRP 605
++G K GS Y PE G+ G D++S G++L + +G P
Sbjct: 162 ----NEFTVGNKLDTFCGSPPYAAPELFQGK-KYDGPEVDVWSLGVILYTLVSGSLP 213
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 102/222 (45%), Gaps = 37/222 (16%)
Query: 400 GSFGSVYKGTLGDGTIVAI-KVLKLQQQGALKSFIDECNALKSTRHRNILRVITACSSVD 458
G FG VYK + +++A KV+ + + L+ ++ E + L S H NI++++ A
Sbjct: 21 GDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY--- 77
Query: 459 LEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKK-LSVIQRLNIAIDVASALDYLHHHC 517
E N + ++ EF + G +D A + ++ L+ Q + AL+YLH
Sbjct: 78 YENNLW--ILIEFCAGGAVD-------AVMLELERPLTESQIQVVCKQTLDALNYLH--- 125
Query: 518 DTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGS-IG---Y 573
D I H DLK N+L D + DFG++ +KN I + S IG +
Sbjct: 126 DNKIIHRDLKAGNILFTLDGDIKLADFGVS----------AKNTRTXIQRRDSFIGTPYW 175
Query: 574 IPPEHMNGQVS------ILGDIYSYGILLLEMFTGKRPTGDM 609
+ PE + + S D++S GI L+EM + P ++
Sbjct: 176 MAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHEL 217
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 107/220 (48%), Gaps = 27/220 (12%)
Query: 397 IGTGSFGSVYKGTL---GDGTIVAIKVLKLQQQG-ALK-SFIDECNALKSTRHRNILRVI 451
+G+G+FG+V KG VA+K+LK + ALK + E N ++ + I+R+I
Sbjct: 378 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 437
Query: 452 TACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALD 511
C + LV E G L+++L ++ K ++I+ ++ V+ +
Sbjct: 438 GICEAESW------MLVMEMAELGPLNKYLQ----QNRHVKDKNIIELVH---QVSMGMK 484
Query: 512 YLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSI 571
YL ++ H DL NVLL A + DFGL+K L +N K QT K +
Sbjct: 485 YLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL-RADENYYKAQTHG---KWPV 537
Query: 572 GYIPPEHMN-GQVSILGDIYSYGILLLEMFT-GKRPTGDM 609
+ PE +N + S D++S+G+L+ E F+ G++P M
Sbjct: 538 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM 577
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 101/219 (46%), Gaps = 28/219 (12%)
Query: 389 DNFSKENLIGTGSFGSVYKGTL-GDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNI 447
DNF K IG GS G V T+ G +VA+K + L++Q + +E ++ +H N+
Sbjct: 27 DNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV 83
Query: 448 LRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVA 507
+ + + L G++ +V EF+ G L + +++ Q + + V
Sbjct: 84 VEMYNSY----LVGDEL-WVVMEFLEGGAL--------TDIVTHTRMNEEQIAAVCLAVL 130
Query: 508 SALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGL 567
AL LH + H D+K ++LL D + DFG F ++S + + L
Sbjct: 131 QALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFG---FCAQVSKEVPRRKX----L 180
Query: 568 KGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRP 605
G+ ++ PE ++ DI+S GI+++EM G+ P
Sbjct: 181 VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 219
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 97/219 (44%), Gaps = 24/219 (10%)
Query: 390 NFSKENLIGTGSFGSVYKGTLGD-GTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNIL 448
+++ +IG GSFG VY+ L D G +VAIK K+ Q K+ E ++ H NI+
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--RELQIMRKLDHCNIV 110
Query: 449 RV-ITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVA 507
R+ SS + + + LV +++ H S A+ + L VI +
Sbjct: 111 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK----QTLPVIYVKLYMYQLF 166
Query: 508 SALDYLHHHCDTPIAHCDLKPSNVLLDKDMTA-HVGDFGLAKFLFEISDNPSKNQTVSIG 566
+L Y+H I H D+KP N+LLD D + DFG AK L N +
Sbjct: 167 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--------VS 215
Query: 567 LKGSIGYIPPEHMNGQVSILG--DIYSYGILLLEMFTGK 603
S Y PE + G D++S G +L E+ G+
Sbjct: 216 YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 105/276 (38%), Gaps = 67/276 (24%)
Query: 385 SKSTDNFSKENLIGTGSFGSVYKGT-LGDGTIVAIKVLKL-QQQGALKSFIDECNALKST 442
S+ +F +G G FG V++ D AIK ++L ++ A + + E AL
Sbjct: 2 SRYLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKL 61
Query: 443 RHRNILRVITAC---------------------------SSVDLEGNDFKALVFEFMSNG 475
H I+R A S ++ K + S
Sbjct: 62 EHPGIVRYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTK 121
Query: 476 NLDQWLHPSPAEHYQFKKLSVIQR---------------------LNIAIDVASALDYLH 514
N L PS + Y + ++ + ++ L+I I +A A+++LH
Sbjct: 122 NTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLH 181
Query: 515 HHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTV---------SI 565
+ H DLKPSN+ D VGDFGL + D + QTV
Sbjct: 182 SKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAM----DQDEEEQTVLTPMPAYATHX 234
Query: 566 GLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMF 600
G G+ Y+ PE ++G S DI+S G++L E+
Sbjct: 235 GQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 94/223 (42%), Gaps = 32/223 (14%)
Query: 390 NFSKENLIGTGSFGSVYKGT-LGDGTIVAIKVLKLQQ--QGALKSFIDECNALKSTRHRN 446
N+ IG G+F V + G VA+K++ Q +L+ E +K H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 447 ILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDV 506
I+++ +E LV E+ S G + +L H + K+ + +
Sbjct: 75 IVKLFEV-----IETEKTLYLVMEYASGGEVFDYL----VAHGRMKEKEARAKFR---QI 122
Query: 507 ASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLA-KFLFEISDNPSKNQTVSI 565
SA+ Y H I H DLK N+LLD DM + DFG + +F F +K T
Sbjct: 123 VSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTF-----GNKLDTFC- 173
Query: 566 GLKGSIGYIPPEHMNGQVSILG---DIYSYGILLLEMFTGKRP 605
GS Y PE G+ G D++S G++L + +G P
Sbjct: 174 ---GSPPYAAPELFQGK-KYDGPEVDVWSLGVILYTLVSGSLP 212
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 97/219 (44%), Gaps = 24/219 (10%)
Query: 390 NFSKENLIGTGSFGSVYKGTLGD-GTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNIL 448
+++ +IG GSFG VY+ L D G +VAIK K+ Q K+ E ++ H NI+
Sbjct: 49 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--RELQIMRKLDHCNIV 104
Query: 449 RV-ITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVA 507
R+ SS + + + LV +++ H S A+ + L VI +
Sbjct: 105 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK----QTLPVIYVKLYMYQLF 160
Query: 508 SALDYLHHHCDTPIAHCDLKPSNVLLDKDMTA-HVGDFGLAKFLFEISDNPSKNQTVSIG 566
+L Y+H I H D+KP N+LLD D + DFG AK L N +
Sbjct: 161 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--------VS 209
Query: 567 LKGSIGYIPPEHMNGQVSILG--DIYSYGILLLEMFTGK 603
S Y PE + G D++S G +L E+ G+
Sbjct: 210 YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 248
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 97/219 (44%), Gaps = 24/219 (10%)
Query: 390 NFSKENLIGTGSFGSVYKGTLGD-GTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNIL 448
+++ +IG GSFG VY+ L D G +VAIK K+ Q K+ E ++ H NI+
Sbjct: 57 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--RELQIMRKLDHCNIV 112
Query: 449 RV-ITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVA 507
R+ SS + + + LV +++ H S A+ + L VI +
Sbjct: 113 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK----QTLPVIYVKLYMYQLF 168
Query: 508 SALDYLHHHCDTPIAHCDLKPSNVLLDKDMTA-HVGDFGLAKFLFEISDNPSKNQTVSIG 566
+L Y+H I H D+KP N+LLD D + DFG AK L N +
Sbjct: 169 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--------VS 217
Query: 567 LKGSIGYIPPEHMNGQVSILG--DIYSYGILLLEMFTGK 603
S Y PE + G D++S G +L E+ G+
Sbjct: 218 YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 256
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 93/222 (41%), Gaps = 30/222 (13%)
Query: 390 NFSKENLIGTGSFGSVYKGT-LGDGTIVAIKVLKLQQ--QGALKSFIDECNALKSTRHRN 446
N+ IG G+F V + G VA+K++ Q +L+ E +K H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 447 ILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDV 506
I+++ +E LV E+ S G + +L H + K+ + +
Sbjct: 75 IVKLFEV-----IETEKTLYLVMEYASGGEVFDYL----VAHGRMKEKEARAKFR---QI 122
Query: 507 ASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLA-KFLFEISDNPSKNQTVSI 565
SA+ Y H I H DLK N+LLD DM + DFG + +F F +K T
Sbjct: 123 VSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTF-----GNKLDTFC- 173
Query: 566 GLKGSIGYIPPEHMNGQV--SILGDIYSYGILLLEMFTGKRP 605
GS Y PE G+ D++S G++L + +G P
Sbjct: 174 ---GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 212
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 97/219 (44%), Gaps = 24/219 (10%)
Query: 390 NFSKENLIGTGSFGSVYKGTLGD-GTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNIL 448
+++ +IG GSFG VY+ L D G +VAIK K+ Q K+ E ++ H NI+
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--RELQIMRKLDHCNIV 110
Query: 449 RV-ITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVA 507
R+ SS + + + LV +++ H S A+ + L VI +
Sbjct: 111 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK----QTLPVIYVKLYMYQLF 166
Query: 508 SALDYLHHHCDTPIAHCDLKPSNVLLDKDMTA-HVGDFGLAKFLFEISDNPSKNQTVSIG 566
+L Y+H I H D+KP N+LLD D + DFG AK L N +
Sbjct: 167 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--------VS 215
Query: 567 LKGSIGYIPPEHMNGQVSILG--DIYSYGILLLEMFTGK 603
S Y PE + G D++S G +L E+ G+
Sbjct: 216 XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 100/228 (43%), Gaps = 38/228 (16%)
Query: 391 FSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILR 449
F+K IG GSFG V+KG +VAIK++ L++ + + +
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEE-----------AEDEIEDIQQEIT 77
Query: 450 VITACSS---VDLEGNDFK----ALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNI 502
V++ C S G+ K ++ E++ G+ L P P + Q ++ I R
Sbjct: 78 VLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQ---IATILR--- 131
Query: 503 AIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQT 562
++ LDYLH H D+K +NVLL + + DFG+A +++D K T
Sbjct: 132 --EILKGLDYLHSEKKI---HRDIKAANVLLSEHGEVKLADFGVAG---QLTDTQIKRNT 183
Query: 563 VSIGLKGSIGYIPPEHM-NGQVSILGDIYSYGILLLEMFTGKRPTGDM 609
G+ ++ PE + DI+S GI +E+ G+ P ++
Sbjct: 184 FV----GTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSEL 227
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 101/219 (46%), Gaps = 28/219 (12%)
Query: 389 DNFSKENLIGTGSFGSVYKGTL-GDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNI 447
DNF K IG GS G V T+ G +VA+K + L++Q + +E ++ +H N+
Sbjct: 154 DNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV 210
Query: 448 LRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVA 507
+ + + L G++ +V EF+ G L + +++ Q + + V
Sbjct: 211 VEMYNSY----LVGDEL-WVVMEFLEGGAL--------TDIVTHTRMNEEQIAAVCLAVL 257
Query: 508 SALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGL 567
AL LH + H D+K ++LL D + DFG F ++S + + L
Sbjct: 258 QALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFG---FCAQVSKEVPRRKX----L 307
Query: 568 KGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRP 605
G+ ++ PE ++ DI+S GI+++EM G+ P
Sbjct: 308 VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 346
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 97/219 (44%), Gaps = 24/219 (10%)
Query: 390 NFSKENLIGTGSFGSVYKGTLGD-GTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNIL 448
+++ +IG GSFG VY+ L D G +VAIK K+ Q K+ E ++ H NI+
Sbjct: 59 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--RELQIMRKLDHCNIV 114
Query: 449 RV-ITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVA 507
R+ SS + + + LV +++ H S A+ + L VI +
Sbjct: 115 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK----QTLPVIYVKLYMYQLF 170
Query: 508 SALDYLHHHCDTPIAHCDLKPSNVLLDKDMTA-HVGDFGLAKFLFEISDNPSKNQTVSIG 566
+L Y+H I H D+KP N+LLD D + DFG AK L N +
Sbjct: 171 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--------VS 219
Query: 567 LKGSIGYIPPEHMNGQVSILG--DIYSYGILLLEMFTGK 603
S Y PE + G D++S G +L E+ G+
Sbjct: 220 YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 258
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 97/219 (44%), Gaps = 24/219 (10%)
Query: 390 NFSKENLIGTGSFGSVYKGTLGD-GTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNIL 448
+++ +IG GSFG VY+ L D G +VAIK K+ Q K+ E ++ H NI+
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--RELQIMRKLDHCNIV 76
Query: 449 RV-ITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVA 507
R+ SS + + + LV +++ H S A+ + L VI +
Sbjct: 77 RLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAK----QTLPVIYVKLYMYQLF 132
Query: 508 SALDYLHHHCDTPIAHCDLKPSNVLLDKDMTA-HVGDFGLAKFLFEISDNPSKNQTVSIG 566
+L Y+H I H D+KP N+LLD D + DFG AK L N +
Sbjct: 133 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--------VS 181
Query: 567 LKGSIGYIPPEHMNGQVSILG--DIYSYGILLLEMFTGK 603
S Y PE + G D++S G +L E+ G+
Sbjct: 182 XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 100/228 (43%), Gaps = 38/228 (16%)
Query: 391 FSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILR 449
F+K IG GSFG V+KG +VAIK++ L++ + + +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEE-----------AEDEIEDIQQEIT 57
Query: 450 VITACSS---VDLEGNDFK----ALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNI 502
V++ C S G+ K ++ E++ G+ L P P + Q ++ I R
Sbjct: 58 VLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQ---IATILR--- 111
Query: 503 AIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQT 562
++ LDYLH H D+K +NVLL + + DFG+A +++D K T
Sbjct: 112 --EILKGLDYLHSEKKI---HRDIKAANVLLSEHGEVKLADFGVAG---QLTDTQIKRNT 163
Query: 563 VSIGLKGSIGYIPPEHM-NGQVSILGDIYSYGILLLEMFTGKRPTGDM 609
G+ ++ PE + DI+S GI +E+ G+ P ++
Sbjct: 164 FV----GTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSEL 207
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 107/240 (44%), Gaps = 48/240 (20%)
Query: 391 FSKENL-----IGTGSFGSVYKGT---LG--DGTI-VAIKVLKLQQQGALKSFIDECNAL 439
F + NL +G G+FG V + T LG D + VA+K+LK DE AL
Sbjct: 43 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHA------DEKEAL 96
Query: 440 KST--------RHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPS--PAEHY 489
S +H NI+ ++ AC+ G ++ E+ G+L +L P Y
Sbjct: 97 MSELKIMSHLGQHENIVNLLGACT----HGGPV-LVITEYCCYGDLLNFLRRKRPPGLEY 151
Query: 490 QF-------KKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVG 542
+ ++LS L+ + VA + +L H D+ NVLL A +G
Sbjct: 152 SYNPSHNPEEQLSSRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIG 208
Query: 543 DFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNGQV-SILGDIYSYGILLLEMFT 601
DFGLA+ + S N V + + ++ PE + V ++ D++SYGILL E+F+
Sbjct: 209 DFGLARDIMNDS-----NYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 101/219 (46%), Gaps = 33/219 (15%)
Query: 397 IGTGSFGSVYKGTLGD-GTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRVITACS 455
+G GS+GSVYK + G IVAIK + ++ L+ I E + ++ ++++
Sbjct: 37 LGEGSYGSVYKAIHKETGQIVAIKQVPVE--SDLQEIIKEISIMQQCDSPHVVKYY---- 90
Query: 456 SVDLEGNDFK----ALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALD 511
G+ FK +V E+ G++ + + K L+ + I L+
Sbjct: 91 -----GSYFKNTDLWIVMEYCGAGSVSDIIR------LRNKTLTEDEIATILQSTLKGLE 139
Query: 512 YLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSI 571
YLH H D+K N+LL+ + A + DFG+A +++D +K V G+
Sbjct: 140 YLHFMRKI---HRDIKAGNILLNTEGHAKLADFGVAG---QLTDXMAKRNXVI----GTP 189
Query: 572 GYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRPTGDM 609
++ PE + + + DI+S GI +EM GK P D+
Sbjct: 190 FWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADI 228
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 101/229 (44%), Gaps = 42/229 (18%)
Query: 397 IGTGSFGSVYKG------TLGDGTIVAIKVLKLQQQGALKSFIDECNALKST-------- 442
+G G+FG V + VA+K+LK +GA S E AL S
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLK---EGATHS---EHRALMSELKILIHIG 90
Query: 443 RHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKK--------- 493
H N++ ++ AC+ G +V EF GNL +L E +K+
Sbjct: 91 HHLNVVNLLGACTK---PGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDF 146
Query: 494 LSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEI 553
L++ + + VA +++L H DL N+LL + + DFGLA+ +++
Sbjct: 147 LTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 203
Query: 554 SDNPSKNQTVSIGLKGSIGYIPPEHMNGQV-SILGDIYSYGILLLEMFT 601
D K + + ++ PE + +V +I D++S+G+LL E+F+
Sbjct: 204 PDYVRKGDA-----RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 247
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 104/238 (43%), Gaps = 46/238 (19%)
Query: 391 FSKENL-----IGTGSFGSVYKGT---LG--DGTI-VAIKVLKLQQQGALKSFIDECNAL 439
F + NL +G G+FG V + T LG D + VA+K+LK DE AL
Sbjct: 43 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHA------DEKEAL 96
Query: 440 KST--------RHRNILRVITACSSVDLEGNDFKALVFEFMSNGNL-------DQWLHPS 484
S +H NI+ ++ AC+ G ++ E+ G+L + L
Sbjct: 97 MSELKIMSHLGQHENIVNLLGACT----HGGPV-LVITEYCCYGDLLNFLRRKSRVLETD 151
Query: 485 PAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDF 544
PA LS L+ + VA + +L H D+ NVLL A +GDF
Sbjct: 152 PAFAIANSTLSTRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDF 208
Query: 545 GLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNGQV-SILGDIYSYGILLLEMFT 601
GLA+ + S N V + + ++ PE + V ++ D++SYGILL E+F+
Sbjct: 209 GLARDIMNDS-----NYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 93/222 (41%), Gaps = 30/222 (13%)
Query: 390 NFSKENLIGTGSFGSVYKGT-LGDGTIVAIKVLKLQQ--QGALKSFIDECNALKSTRHRN 446
N+ IG G+F V + G VA++++ Q +L+ E +K H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 447 ILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDV 506
I+++ +E LV E+ S G + +L H + K+ + +
Sbjct: 75 IVKLFEV-----IETEKTLYLVMEYASGGEVFDYL----VAHGRMKEKEARAKFR---QI 122
Query: 507 ASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLA-KFLFEISDNPSKNQTVSI 565
SA+ Y H I H DLK N+LLD DM + DFG + +F F +K T
Sbjct: 123 VSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTF-----GNKLDTFC- 173
Query: 566 GLKGSIGYIPPEHMNGQV--SILGDIYSYGILLLEMFTGKRP 605
GS Y PE G+ D++S G++L + +G P
Sbjct: 174 ---GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 212
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 93/223 (41%), Gaps = 32/223 (14%)
Query: 390 NFSKENLIGTGSFGSVYKGT-LGDGTIVAIKVLKLQQ--QGALKSFIDECNALKSTRHRN 446
N+ IG G+F V + G VA+K++ Q +L+ E +K H N
Sbjct: 8 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 67
Query: 447 ILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDV 506
I+++ +E LV E+ S G + +L H K+ + +
Sbjct: 68 IVKLFEV-----IETEKTLYLVMEYASGGEVFDYL----VAHGWMKEKEARAKFR---QI 115
Query: 507 ASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLA-KFLFEISDNPSKNQTVSI 565
SA+ Y H I H DLK N+LLD DM + DFG + +F F +K T
Sbjct: 116 VSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTF-----GNKLDTFC- 166
Query: 566 GLKGSIGYIPPEHMNGQVSILG---DIYSYGILLLEMFTGKRP 605
GS Y PE G+ G D++S G++L + +G P
Sbjct: 167 ---GSPPYAAPELFQGK-KYDGPEVDVWSLGVILYTLVSGSLP 205
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 104/244 (42%), Gaps = 34/244 (13%)
Query: 378 GMSYSDISKSTDNFSKENLIGTGSFGSVYKGT-LGDGTIVAIKVLKLQQQGALKSFIDEC 436
G S + +K +D F +IG GSFG V + A+KVL Q++ LK E
Sbjct: 28 GPSSNPHAKPSD-FHFLKVIGKGSFGKVLLARHKAEEVFYAVKVL--QKKAILKK--KEE 82
Query: 437 NALKSTRH---RNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKK 493
+ S R+ +N+ + D V ++++ G L H Q ++
Sbjct: 83 KHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGEL--------FYHLQRER 134
Query: 494 LSVIQRLNI-AIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFE 552
+ R A ++ASAL YLH I + DLKP N+LLD + DFGL K
Sbjct: 135 CFLEPRARFYAAEIASALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCK---- 187
Query: 553 ISDNPSKNQTVSIGLKGSIGYIPPEHMNGQ-VSILGDIYSYGILLLEMFTGKRP-----T 606
+N N T S G+ Y+ PE ++ Q D + G +L EM G P T
Sbjct: 188 --ENIEHNSTTST-FCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNT 244
Query: 607 GDMF 610
+M+
Sbjct: 245 AEMY 248
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 86/198 (43%), Gaps = 20/198 (10%)
Query: 416 VAIKVLKL---QQQGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFKALVFEFM 472
VA+KVL+ + F E + H I+ V + +V E++
Sbjct: 40 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYD-TGEAETPAGPLPYIVMEYV 98
Query: 473 SNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVL 532
L +H ++ + + + D AL++ H + I H D+KP+N++
Sbjct: 99 DGVTLRDIVHTE-------GPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIM 148
Query: 533 LDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNGQ-VSILGDIYS 591
+ V DFG+A+ + + + S QT ++ G+ Y+ PE G V D+YS
Sbjct: 149 ISATNAVKVMDFGIARAIADSGN--SVTQTAAV--IGTAQYLSPEQARGDSVDARSDVYS 204
Query: 592 YGILLLEMFTGKRP-TGD 608
G +L E+ TG+ P TGD
Sbjct: 205 LGCVLYEVLTGEPPFTGD 222
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 94/235 (40%), Gaps = 40/235 (17%)
Query: 382 SDISKSTDNFSKENLIGTGSFGSVYKGT-LGDGTIVAIKVLKLQQ--QGALKSFIDECNA 438
SD N+ IG G+F V + G VAIK++ Q +L+ E
Sbjct: 5 SDEQPHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRI 64
Query: 439 LKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQ 498
+K H NI+++ +E L+ E+ S G + +L H + K+
Sbjct: 65 MKILNHPNIVKLFEV-----IETEKTLYLIMEYASGGEVFDYL----VAHGRMKEKEARS 115
Query: 499 RLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPS 558
+ + SA+ Y H I H DLK N+LLD DM + DFG +
Sbjct: 116 KFR---QIVSAVQYCHQ---KRIVHRDLKAENLLLDADMNIKIADFGFS----------- 158
Query: 559 KNQTVSIGLK-----GSIGYIPPEHMNGQVSILG---DIYSYGILLLEMFTGKRP 605
++G K GS Y PE G+ G D++S G++L + +G P
Sbjct: 159 --NEFTVGGKLDTFCGSPPYAAPELFQGK-KYDGPEVDVWSLGVILYTLVSGSLP 210
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 100/242 (41%), Gaps = 50/242 (20%)
Query: 386 KSTDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQQGALKSFIDECNALKSTRH 444
+ +F + ++G G+FG V K D AIK ++ ++ L + + E L S H
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEE-KLSTILSEVXLLASLNH 61
Query: 445 RNILRVITACSSVDLEGNDF---------KALVF---EFMSNGNLDQWLHPSPAEHYQFK 492
+ ++R A LE +F K+ +F E+ N L +H + +
Sbjct: 62 QYVVRYYAAW----LERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDE 117
Query: 493 KLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFE 552
+ ++ + AL Y+H I H +LKP N+ +D+ +GDFGLAK +
Sbjct: 118 YWRLFRQ------ILEALSYIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAKNVHR 168
Query: 553 ISD----------NPSKNQTVSIGLKGSIGYIPPE------HMNGQVSILGDIYSYGILL 596
D S N T +I G+ Y+ E H N ++ D YS GI+
Sbjct: 169 SLDILKLDSQNLPGSSDNLTSAI---GTAXYVATEVLDGTGHYNEKI----DXYSLGIIF 221
Query: 597 LE 598
E
Sbjct: 222 FE 223
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 106/230 (46%), Gaps = 30/230 (13%)
Query: 388 TDNFSKENLIGTGSFGSVYKGTLGD-GTIVAIKVLKLQQQG--ALKSFIDECNALKSTRH 444
+ +F ++L+G G++G V T G IVAIK ++ + AL++ + E LK +H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRT-LREIKILKHFKH 68
Query: 445 RNILRVITACSSVDLEGNDFKALVFEFMSNG----NLDQWLHPSPAEHYQFKKLSVIQRL 500
NI+ + E + ++ E M Q L +++ ++ L ++ L
Sbjct: 69 ENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVL 128
Query: 501 NIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFE-ISDN--P 557
+ + + H DLKPSN+L++ + V DFGLA+ + E +DN P
Sbjct: 129 H----------------GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEP 172
Query: 558 SKNQTVSIGLKGSIGYIPPEHM--NGQVSILGDIYSYGILLLEMFTGKRP 605
+ Q+ + Y PE M + + S D++S G +L E+F +RP
Sbjct: 173 TGQQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRP 221
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 106/230 (46%), Gaps = 30/230 (13%)
Query: 388 TDNFSKENLIGTGSFGSVYKGTLGD-GTIVAIKVLKLQQQG--ALKSFIDECNALKSTRH 444
+ +F ++L+G G++G V T G IVAIK ++ + AL++ + E LK +H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRT-LREIKILKHFKH 68
Query: 445 RNILRVITACSSVDLEGNDFKALVFEFMSNG----NLDQWLHPSPAEHYQFKKLSVIQRL 500
NI+ + E + ++ E M Q L +++ ++ L ++ L
Sbjct: 69 ENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVL 128
Query: 501 NIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFE-ISDN--P 557
+ + + H DLKPSN+L++ + V DFGLA+ + E +DN P
Sbjct: 129 H----------------GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEP 172
Query: 558 SKNQTVSIGLKGSIGYIPPEHM--NGQVSILGDIYSYGILLLEMFTGKRP 605
+ Q+ + Y PE M + + S D++S G +L E+F +RP
Sbjct: 173 TGQQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRP 221
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 93/225 (41%), Gaps = 36/225 (16%)
Query: 389 DNFSKENLIGTGSFGSVY-KGTLGDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNI 447
D F + +GTGSFG V + G A+K+L Q+ LK N + I
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLN------EKRI 94
Query: 448 LRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLN------ 501
L+ + V LE F F N NL + +P F L I R +
Sbjct: 95 LQAVNFPFLVKLE--------FSFKDNSNLYMVMEYAPGGE-MFSHLRRIGRFSEPHARF 145
Query: 502 IAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQ 561
A + +YLH + + DLKP N+++D+ V DFGLAK + +
Sbjct: 146 YAAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIQVTDFGLAK----------RVK 192
Query: 562 TVSIGLKGSIGYIPPE-HMNGQVSILGDIYSYGILLLEMFTGKRP 605
+ L G+ Y+ PE ++ + D ++ G+L+ EM G P
Sbjct: 193 GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 86/198 (43%), Gaps = 20/198 (10%)
Query: 416 VAIKVLKL---QQQGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFKALVFEFM 472
VA+KVL+ + F E + H I+ V + +V E++
Sbjct: 57 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYD-TGEAETPAGPLPYIVMEYV 115
Query: 473 SNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVL 532
L +H ++ + + + D AL++ H + I H D+KP+N++
Sbjct: 116 DGVTLRDIVHTE-------GPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIM 165
Query: 533 LDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNGQ-VSILGDIYS 591
+ V DFG+A+ + + + S QT ++ G+ Y+ PE G V D+YS
Sbjct: 166 ISATNAVKVMDFGIARAIADSGN--SVTQTAAV--IGTAQYLSPEQARGDSVDARSDVYS 221
Query: 592 YGILLLEMFTGKRP-TGD 608
G +L E+ TG+ P TGD
Sbjct: 222 LGCVLYEVLTGEPPFTGD 239
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 100/229 (43%), Gaps = 42/229 (18%)
Query: 397 IGTGSFGSVYKG------TLGDGTIVAIKVLKLQQQGALKSFIDECNALKST-------- 442
+G G+FG V + VA+K+LK +GA S E AL S
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLK---EGATHS---EHRALMSELKILIHIG 125
Query: 443 RHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKK--------- 493
H N++ ++ AC+ G +V EF GNL +L E +K
Sbjct: 126 HHLNVVNLLGACTK---PGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF 181
Query: 494 LSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEI 553
L++ + + VA +++L H DL N+LL + + DFGLA+ +++
Sbjct: 182 LTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 238
Query: 554 SDNPSKNQTVSIGLKGSIGYIPPEHMNGQV-SILGDIYSYGILLLEMFT 601
D K + + ++ PE + +V +I D++S+G+LL E+F+
Sbjct: 239 PDYVRKGDA-----RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 282
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 100/229 (43%), Gaps = 42/229 (18%)
Query: 397 IGTGSFGSVYKG------TLGDGTIVAIKVLKLQQQGALKSFIDECNALKST-------- 442
+G G+FG V + VA+K+LK +GA S E AL S
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLK---EGATHS---EHRALMSELKILIHIG 88
Query: 443 RHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKK--------- 493
H N++ ++ AC+ G +V EF GNL +L E +K
Sbjct: 89 HHLNVVNLLGACTK---PGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF 144
Query: 494 LSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEI 553
L++ + + VA +++L H DL N+LL + + DFGLA+ +++
Sbjct: 145 LTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 201
Query: 554 SDNPSKNQTVSIGLKGSIGYIPPEHMNGQV-SILGDIYSYGILLLEMFT 601
D K + + ++ PE + +V +I D++S+G+LL E+F+
Sbjct: 202 PDXVRKGDA-----RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 93/223 (41%), Gaps = 42/223 (18%)
Query: 397 IGTGSFGSVYKGTLGDGTIVAIKVLKLQQQGALKSFIDECNALKST--RHRNILRVITAC 454
+G G +G V++G L G VA+K+ + + +S+ E + RH NIL I +
Sbjct: 16 VGKGRYGEVWRG-LWHGESVAVKIFSSRDE---QSWFRETEIYNTVLLRHDNILGFIAS- 70
Query: 455 SSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEH---YQFKKLSVIQ---RLNIAIDVAS 508
D+ N + WL EH Y F + ++ L +A+ A
Sbjct: 71 ---DMTSR-----------NSSTQLWLITHYHEHGSLYDFLQRQTLEPHLALRLAVSAAC 116
Query: 509 ALDYLH-----HHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTV 563
L +LH IAH D K NVL+ ++ + D GLA + SD
Sbjct: 117 GLAHLHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNP 176
Query: 564 SIGLKGSIGYIPPEHMNGQVSI-------LGDIYSYGILLLEM 599
+G K Y+ PE ++ Q+ DI+++G++L E+
Sbjct: 177 RVGTK---RYMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 105/232 (45%), Gaps = 28/232 (12%)
Query: 376 QSGMSYSDISKSTDNFSKENLIGTGSFGSVYKGTLGD-GTIVAIKVLKLQQQGALKSFID 434
Q +S D + NF K IG GS G V T G VA+K + L++Q + +
Sbjct: 35 QLVVSPGDPREYLANFIK---IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFN 91
Query: 435 ECNALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKL 494
E ++ H N++ + ++ L G++ +V EF+ G L + ++
Sbjct: 92 EVVIMRDYHHDNVVDMYSSY----LVGDEL-WVVMEFLEGGALTDIV--------THTRM 138
Query: 495 SVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEIS 554
+ Q + + V AL YLH+ + H D+K ++LL D + DFG F ++S
Sbjct: 139 NEEQIATVCLSVLRALSYLHNQG---VIHRDIKSDSILLTSDGRIKLSDFG---FCAQVS 192
Query: 555 DNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRP 605
K + L G+ ++ PE ++ DI+S GI+++EM G+ P
Sbjct: 193 KEVPKRKX----LVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPP 240
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 99/227 (43%), Gaps = 40/227 (17%)
Query: 397 IGTGSFGSVYKG------TLGDGTIVAIKVLKLQQQGALKSFIDECNALKST-------- 442
+G G+FG V + VA+K+LK +GA S E AL S
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLK---EGATHS---EHRALMSELKILIHIG 90
Query: 443 RHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKK-------LS 495
H N++ ++ AC+ G +V EF GNL +L E +K L+
Sbjct: 91 HHLNVVNLLGACTK---PGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLT 146
Query: 496 VIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISD 555
+ + + VA +++L H DL N+LL + + DFGLA+ + + D
Sbjct: 147 LEHLIXYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPD 203
Query: 556 NPSKNQTVSIGLKGSIGYIPPEHMNGQV-SILGDIYSYGILLLEMFT 601
K + + ++ PE + +V +I D++S+G+LL E+F+
Sbjct: 204 XVRKGDA-----RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 91/225 (40%), Gaps = 36/225 (16%)
Query: 389 DNFSKENLIGTGSFGSVY-KGTLGDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNI 447
D F + IGTGSFG V + G A+K+L Q+ LK N + I
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN------EKRI 94
Query: 448 LRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLN------ 501
L+ + V LE F F N NL + P F L I R +
Sbjct: 95 LQAVNFPFLVKLE--------FSFKDNSNLYMVMEYVPGGE-MFSHLRRIGRFSEPHARF 145
Query: 502 IAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQ 561
A + +YLH + + DLKP N+L+D+ V DFG AK + +
Sbjct: 146 YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAK----------RVK 192
Query: 562 TVSIGLKGSIGYIPPE-HMNGQVSILGDIYSYGILLLEMFTGKRP 605
+ L G+ Y+ PE ++ + D ++ G+L+ EM G P
Sbjct: 193 GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 91/213 (42%), Gaps = 28/213 (13%)
Query: 403 GSVYKGTLGDGTIVAIKVLKLQQQGALKS--FIDECNALKSTRHRNILRVITACSSVDLE 460
G ++KG G + +KVLK++ KS F +EC L+ H N+L V+ AC S
Sbjct: 24 GELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQS---P 79
Query: 461 GNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTP 520
L+ + G+L LH E F + Q + A+D A +L H +
Sbjct: 80 PAPHPTLITHWXPYGSLYNVLH----EGTNF-VVDQSQAVKFALDXARGXAFL-HTLEPL 133
Query: 521 IAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMN 580
I L +V +D+D TA + + KF F+ S G + ++ PE +
Sbjct: 134 IPRHALNSRSVXIDEDXTARISXADV-KFSFQ-----------SPGRXYAPAWVAPEALQ 181
Query: 581 GQVSIL----GDIYSYGILLLEMFTGKRPTGDM 609
+ D +S+ +LL E+ T + P D+
Sbjct: 182 KKPEDTNRRSADXWSFAVLLWELVTREVPFADL 214
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 92/212 (43%), Gaps = 24/212 (11%)
Query: 397 IGTGSFGSV---YKGTLGD--GTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRVI 451
+G G+FGSV LGD G +VA+K L+ + F E LK+ I++
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 74
Query: 452 TACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALD 511
G LV E++ +G L +L A +L + L + + ++
Sbjct: 75 GVSYG---PGRPELRLVMEYLPSGCLRDFLQRHRA------RLDASRLLLYSSQICKGME 125
Query: 512 YL-HHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGS 570
YL C H DL N+L++ + + DFGLAK L D V +
Sbjct: 126 YLGSRRC----VHRDLAARNILVESEAHVKIADFGLAKLLPLDKD----XXVVREPGQSP 177
Query: 571 IGYIPPEHMNGQV-SILGDIYSYGILLLEMFT 601
I + PE ++ + S D++S+G++L E+FT
Sbjct: 178 IFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 93/225 (41%), Gaps = 36/225 (16%)
Query: 389 DNFSKENLIGTGSFGSVY-KGTLGDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNI 447
D F + +GTGSFG V + G A+K+L Q+ LK N + I
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLN------EKRI 94
Query: 448 LRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLN------ 501
L+ + V LE F F N NL + +P F L I R +
Sbjct: 95 LQAVNFPFLVKLE--------FSFKDNSNLYMVMEYAPGGE-MFSHLRRIGRFSEPHARF 145
Query: 502 IAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQ 561
A + +YLH + + DLKP N+++D+ V DFGLAK + +
Sbjct: 146 YAAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGLAK----------RVK 192
Query: 562 TVSIGLKGSIGYIPPE-HMNGQVSILGDIYSYGILLLEMFTGKRP 605
+ L G+ Y+ PE ++ + D ++ G+L+ EM G P
Sbjct: 193 GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 100/229 (43%), Gaps = 42/229 (18%)
Query: 397 IGTGSFGSVYKG------TLGDGTIVAIKVLKLQQQGALKSFIDECNALKST-------- 442
+G G+FG V + VA+K+LK +GA S E AL S
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLK---EGATHS---EHRALMSELKILIHIG 88
Query: 443 RHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKK--------- 493
H N++ ++ AC+ G +V EF GNL +L E +K
Sbjct: 89 HHLNVVNLLGACTK---PGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF 144
Query: 494 LSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEI 553
L++ + + VA +++L H DL N+LL + + DFGLA+ +++
Sbjct: 145 LTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 201
Query: 554 SDNPSKNQTVSIGLKGSIGYIPPEHMNGQV-SILGDIYSYGILLLEMFT 601
D K + + ++ PE + +V +I D++S+G+LL E+F+
Sbjct: 202 PDYVRKGDA-----RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 95/222 (42%), Gaps = 31/222 (13%)
Query: 397 IGTGSFGSVYKGTL---GDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHR----NILR 449
+G G+FGSV +G VAIKVLK QG K+ +E H+ I+R
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLK---QGTEKADTEEMMREAQIMHQLDNPYIVR 74
Query: 450 VITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASA 509
+I C + L LV E G L ++L E + V + V+
Sbjct: 75 LIGVCQAEAL------MLVMEMAGGGPLHKFLVGKREE------IPVSNVAELLHQVSMG 122
Query: 510 LDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKG 569
+ YL + H DL NVLL A + DFGL+K L + S S G K
Sbjct: 123 MKYLE---EKNFVHRDLAARNVLLVNRHYAKISDFGLSKAL---GADDSYYTARSAG-KW 175
Query: 570 SIGYIPPEHMN-GQVSILGDIYSYGILLLEMFT-GKRPTGDM 609
+ + PE +N + S D++SYG+ + E + G++P M
Sbjct: 176 PLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKM 217
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 102/231 (44%), Gaps = 47/231 (20%)
Query: 390 NFSKENLIGTGSFGSVYKGTLGDG-TIVAIKVLKLQQ--QGALKSFIDECNALKSTRHRN 446
+ K IG G++G+V+K + IVA+K ++L +G S + E LK +H+N
Sbjct: 3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKN 62
Query: 447 ILRVITACSSVDLEGNDFKALVFEFMS----------NGNLDQWLHPSPAEHYQFKKLSV 496
I+R+ L + LVFEF NG+LD P + + F+ L
Sbjct: 63 IVRLHDV-----LHSDKKLTLVFEFCDQDLKKYFDSCNGDLD----PEIVKSFLFQLLK- 112
Query: 497 IQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDN 556
L + H + H DLKP N+L++++ + +FGLA+ F I
Sbjct: 113 ------------GLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLAR-AFGI--- 153
Query: 557 PSKNQTVSIGLKGSIGYIPPEHMNGQ--VSILGDIYSYGILLLEMFTGKRP 605
P + + + ++ Y PP+ + G S D++S G + E+ RP
Sbjct: 154 PVRCYSAEV---VTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRP 201
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 94/223 (42%), Gaps = 32/223 (14%)
Query: 390 NFSKENLIGTGSFGSVYKGT-LGDGTIVAIKVLKLQQ--QGALKSFIDECNALKSTRHRN 446
N+ IG G+F V + G VA+K++ Q +L+ E +K H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 447 ILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDV 506
I+++ +E LV E+ S G + +L H + K+ + +
Sbjct: 75 IVKLFEV-----IETEKTLYLVMEYASGGEVFDYL----VAHGRMKEKEARAKFR---QI 122
Query: 507 ASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLA-KFLFEISDNPSKNQTVSI 565
SA+ Y H I H DLK N+LLD DM + DFG + +F F N+ +
Sbjct: 123 VSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTF-------GNKLDAF 172
Query: 566 GLKGSIGYIPPEHMNGQVSILG---DIYSYGILLLEMFTGKRP 605
G+ Y PE G+ G D++S G++L + +G P
Sbjct: 173 C--GAPPYAAPELFQGK-KYDGPEVDVWSLGVILYTLVSGSLP 212
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 99/223 (44%), Gaps = 26/223 (11%)
Query: 389 DNFSKENLIGTGSFGSVY-KGTLGDGTIVAIKVL-KLQQQGALKSFIDECNALKSTRHRN 446
D F + +G+G+FG V+ G IK + K + Q ++ E LKS H N
Sbjct: 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPN 81
Query: 447 ILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDV 506
I+++ E +V E G L + + + A + K LS + +
Sbjct: 82 IIKIFEV-----FEDYHNMYIVMETCEGGELLERIVSAQA---RGKALSEGYVAELMKQM 133
Query: 507 ASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAH----VGDFGLAKFLFEISDNPSKNQT 562
+AL Y H + H DLKP N+L +D + H + DFGLA+ LF+ SD S N
Sbjct: 134 MNALAYFH---SQHVVHKDLKPENILF-QDTSPHSPIKIIDFGLAE-LFK-SDEHSTNAA 187
Query: 563 VSIGLKGSIGYIPPEHMNGQVSILGDIYSYGILLLEMFTGKRP 605
G+ Y+ PE V+ DI+S G+++ + TG P
Sbjct: 188 ------GTALYMAPEVFKRDVTFKCDIWSAGVVMYFLLTGCLP 224
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 91/225 (40%), Gaps = 36/225 (16%)
Query: 389 DNFSKENLIGTGSFGSVY-KGTLGDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNI 447
D F + IGTGSFG V + G A+K+L Q+ LK N + I
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN------EKRI 94
Query: 448 LRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLN------ 501
L+ + V LE F F N NL + P F L I R +
Sbjct: 95 LQAVNFPFLVKLE--------FSFKDNSNLYMVMEYMPGGD-MFSHLRRIGRFSEPHARF 145
Query: 502 IAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQ 561
A + +YLH + + DLKP N+L+D+ V DFG AK + +
Sbjct: 146 YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAK----------RVK 192
Query: 562 TVSIGLKGSIGYIPPE-HMNGQVSILGDIYSYGILLLEMFTGKRP 605
+ L G+ Y+ PE ++ + D ++ G+L+ EM G P
Sbjct: 193 GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 101/231 (43%), Gaps = 33/231 (14%)
Query: 383 DISKSTDNFSKENLIGTGSFGSVY----KGTLGDGTIVAIKVLKLQ---QQGALKSFIDE 435
D + ++F L+G G+FG V K T G A+K+L+ + + + + E
Sbjct: 4 DPKVTMNDFDYLKLLGKGTFGKVILVREKAT---GRYYAMKILRKEVIIAKDEVAHTVTE 60
Query: 436 CNALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLS 495
L++TRH +TA + +D V E+ + G L + H S + ++
Sbjct: 61 SRVLQNTRHP----FLTALKYA-FQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERAR 113
Query: 496 VIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISD 555
++ SAL+YLH + + D+K N++LDKD + DFGL K ISD
Sbjct: 114 FY-----GAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISD 163
Query: 556 NPSKNQTVSIGLKGSIGYIPPEHM-NGQVSILGDIYSYGILLLEMFTGKRP 605
+ G+ Y+ PE + + D + G+++ EM G+ P
Sbjct: 164 GATMKXFC-----GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 91/220 (41%), Gaps = 29/220 (13%)
Query: 391 FSKENLIGTGSFGSVYKGTLGDGTIVAIKVLKLQQQGA--LKSFIDECNALKSTRHRNIL 448
++ EN IG GS+G V K + GT + K+ + + F E +KS H NI+
Sbjct: 28 YTLENTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNII 86
Query: 449 RVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVAS 508
R+ E N LV E + G L + + H + + S R I DV S
Sbjct: 87 RLYET-----FEDNTDIYLVMELCTGGELFERV-----VHKRVFRESDAAR--IMKDVLS 134
Query: 509 ALDYLHHHCDTPIAHCDLKPSNVLL---DKDMTAHVGDFGLAKFLFEISDNPSKNQTVSI 565
A+ Y H +AH DLKP N L D + DFGLA P K +
Sbjct: 135 AVAYCHK---LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARF-----KPGKMMRTKV 186
Query: 566 GLKGSIGYIPPEHMNGQVSILGDIYSYGILLLEMFTGKRP 605
G+ Y+ P+ + G D +S G+++ + G P
Sbjct: 187 ---GTPYYVSPQVLEGLYGPECDEWSAGVMMYVLLCGYPP 223
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 91/225 (40%), Gaps = 36/225 (16%)
Query: 389 DNFSKENLIGTGSFGSVY-KGTLGDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNI 447
D F + IGTGSFG V + G A+K+L Q+ LK N + I
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN------EKRI 94
Query: 448 LRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLN------ 501
L+ + V LE F F N NL + P F L I R +
Sbjct: 95 LQAVNFPFLVKLE--------FSFKDNSNLYMVMEYMPGGD-MFSHLRRIGRFSEPHARF 145
Query: 502 IAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQ 561
A + +YLH + + DLKP N+L+D+ V DFG AK + +
Sbjct: 146 YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAK----------RVK 192
Query: 562 TVSIGLKGSIGYIPPE-HMNGQVSILGDIYSYGILLLEMFTGKRP 605
+ L G+ Y+ PE ++ + D ++ G+L+ EM G P
Sbjct: 193 GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 91/220 (41%), Gaps = 29/220 (13%)
Query: 391 FSKENLIGTGSFGSVYKGTLGDGTIVAIKVLKLQQQGA--LKSFIDECNALKSTRHRNIL 448
++ EN IG GS+G V K + GT + K+ + + F E +KS H NI+
Sbjct: 11 YTLENTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNII 69
Query: 449 RVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVAS 508
R+ E N LV E + G L + + H + + S R I DV S
Sbjct: 70 RLYET-----FEDNTDIYLVMELCTGGELFERV-----VHKRVFRESDAAR--IMKDVLS 117
Query: 509 ALDYLHHHCDTPIAHCDLKPSNVLL---DKDMTAHVGDFGLAKFLFEISDNPSKNQTVSI 565
A+ Y H +AH DLKP N L D + DFGLA P K +
Sbjct: 118 AVAYCHK---LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARF-----KPGKMMRTKV 169
Query: 566 GLKGSIGYIPPEHMNGQVSILGDIYSYGILLLEMFTGKRP 605
G+ Y+ P+ + G D +S G+++ + G P
Sbjct: 170 ---GTPYYVSPQVLEGLYGPECDEWSAGVMMYVLLCGYPP 206
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 93/235 (39%), Gaps = 36/235 (15%)
Query: 380 SYSDISKSTDNFSKENLIGTGSFGSVYKGT-LGDGTIVAIKVLKLQQ--QGALKSFIDEC 436
S +D N+ IG G+F V + G VAIK++ Q +L+ E
Sbjct: 6 SCADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREV 65
Query: 437 NALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSV 496
+K H NI+++ +E L+ E+ S G + +L H + K+
Sbjct: 66 RIMKILNHPNIVKLFEV-----IETEKTLYLIMEYASGGEVFDYL----VAHGRMKEKEA 116
Query: 497 IQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDN 556
+ + SA+ Y H I H DLK N+LLD DM + DFG
Sbjct: 117 RSKFR---QIVSAVQYCHQ---KRIVHRDLKAENLLLDADMNIKIADFGF---------- 160
Query: 557 PSKNQTVSIGLKGSIG---YIPPEHMNGQVSILG---DIYSYGILLLEMFTGKRP 605
S TV L G Y PE G+ G D++S G++L + +G P
Sbjct: 161 -SNEFTVGGKLDAFCGAPPYAAPELFQGK-KYDGPEVDVWSLGVILYTLVSGSLP 213
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 100/227 (44%), Gaps = 33/227 (14%)
Query: 387 STDNFSKENLIGTGSFGSVY----KGTLGDGTIVAIKVLKLQ---QQGALKSFIDECNAL 439
+ ++F L+G G+FG V K T G A+K+L+ + + + + E L
Sbjct: 3 TMNDFDYLKLLGKGTFGKVILVREKAT---GRYYAMKILRKEVIIAKDEVAHTVTESRVL 59
Query: 440 KSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQR 499
++TRH +TA + +D V E+ + G L + H S + ++
Sbjct: 60 QNTRHP----FLTALKYA-FQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARFY-- 110
Query: 500 LNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSK 559
++ SAL+YLH + + D+K N++LDKD + DFGL K ISD +
Sbjct: 111 ---GAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATM 162
Query: 560 NQTVSIGLKGSIGYIPPEHM-NGQVSILGDIYSYGILLLEMFTGKRP 605
G+ Y+ PE + + D + G+++ EM G+ P
Sbjct: 163 KTFC-----GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 99/228 (43%), Gaps = 41/228 (17%)
Query: 397 IGTGSFGSVYKG------TLGDGTIVAIKVLKLQQQGALKSFIDECNALKST-------- 442
+G G+FG V + VA+K+LK +GA S E AL S
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLK---EGATHS---EHRALMSELKILIHIG 89
Query: 443 RHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKK--------L 494
H N++ ++ AC+ G +V EF GNL +L E +K L
Sbjct: 90 HHLNVVNLLGACTK---PGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFL 145
Query: 495 SVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEIS 554
++ + + VA +++L H DL N+LL + + DFGLA+ + +
Sbjct: 146 TLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDP 202
Query: 555 DNPSKNQTVSIGLKGSIGYIPPEHMNGQV-SILGDIYSYGILLLEMFT 601
D K + + ++ PE + +V +I D++S+G+LL E+F+
Sbjct: 203 DXVRKGDA-----RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 92/212 (43%), Gaps = 24/212 (11%)
Query: 397 IGTGSFGSV---YKGTLGD--GTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRVI 451
+G G+FGSV LGD G +VA+K L+ + F E LK+ I++
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 78
Query: 452 TACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALD 511
G LV E++ +G L +L A +L + L + + ++
Sbjct: 79 GVSYG---PGRQSLRLVMEYLPSGCLRDFLQRHRA------RLDASRLLLYSSQICKGME 129
Query: 512 YL-HHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGS 570
YL C H DL N+L++ + + DFGLAK L D V +
Sbjct: 130 YLGSRRC----VHRDLAARNILVESEAHVKIADFGLAKLLPLDKD----YYVVREPGQSP 181
Query: 571 IGYIPPEHMNGQV-SILGDIYSYGILLLEMFT 601
I + PE ++ + S D++S+G++L E+FT
Sbjct: 182 IFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 93/225 (41%), Gaps = 36/225 (16%)
Query: 389 DNFSKENLIGTGSFGSVY-KGTLGDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNI 447
D F + +GTGSFG V + G A+K+L Q+ LK N + I
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN------EKRI 95
Query: 448 LRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLN------ 501
L+ + V LE F F N NL + P F L I R +
Sbjct: 96 LQAVNFPFLVKLE--------FSFKDNSNLYMVMEYVPGGE-MFSHLRRIGRFSEPHARF 146
Query: 502 IAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQ 561
A + +YLH + + DLKP N+L+D+ V DFG AK + K +
Sbjct: 147 YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--------KGR 195
Query: 562 TVSIGLKGSIGYIPPE-HMNGQVSILGDIYSYGILLLEMFTGKRP 605
T + L G+ Y+ PE ++ + D ++ G+L+ EM G P
Sbjct: 196 TWT--LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 92/222 (41%), Gaps = 30/222 (13%)
Query: 390 NFSKENLIGTGSFGSVYKGT-LGDGTIVAIKVLKLQQ--QGALKSFIDECNALKSTRHRN 446
N+ IG G+F V + G VA++++ Q +L+ E +K H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 447 ILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDV 506
I+++ +E LV E+ S G + +L H + K+ + +
Sbjct: 75 IVKLFEV-----IETEKTLYLVMEYASGGEVFDYL----VAHGRMKEKEARAKFR---QI 122
Query: 507 ASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLA-KFLFEISDNPSKNQTVSI 565
SA+ Y H I H DLK N+LLD DM + DFG + +F F N+
Sbjct: 123 VSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTF-------GNKLDEF 172
Query: 566 GLKGSIGYIPPEHMNGQV--SILGDIYSYGILLLEMFTGKRP 605
GS Y PE G+ D++S G++L + +G P
Sbjct: 173 C--GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 212
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 100/227 (44%), Gaps = 33/227 (14%)
Query: 387 STDNFSKENLIGTGSFGSVY----KGTLGDGTIVAIKVLKLQ---QQGALKSFIDECNAL 439
+ ++F L+G G+FG V K T G A+K+L+ + + + + E L
Sbjct: 3 TMNDFDYLKLLGKGTFGKVILVREKAT---GRYYAMKILRKEVIIAKDEVAHTVTESRVL 59
Query: 440 KSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQR 499
++TRH +TA + +D V E+ + G L + H S + ++
Sbjct: 60 QNTRHP----FLTALKYA-FQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARFY-- 110
Query: 500 LNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSK 559
++ SAL+YLH + + D+K N++LDKD + DFGL K ISD +
Sbjct: 111 ---GAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATM 162
Query: 560 NQTVSIGLKGSIGYIPPEHM-NGQVSILGDIYSYGILLLEMFTGKRP 605
G+ Y+ PE + + D + G+++ EM G+ P
Sbjct: 163 KXFC-----GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 92/212 (43%), Gaps = 24/212 (11%)
Query: 397 IGTGSFGSV---YKGTLGD--GTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRVI 451
+G G+FGSV LGD G +VA+K L+ + F E LK+ I++
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 77
Query: 452 TACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALD 511
G LV E++ +G L +L A +L + L + + ++
Sbjct: 78 GVSYG---PGRQSLRLVMEYLPSGCLRDFLQRHRA------RLDASRLLLYSSQICKGME 128
Query: 512 YL-HHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGS 570
YL C H DL N+L++ + + DFGLAK L D V +
Sbjct: 129 YLGSRRC----VHRDLAARNILVESEAHVKIADFGLAKLLPLDKD----YYVVREPGQSP 180
Query: 571 IGYIPPEHMNGQV-SILGDIYSYGILLLEMFT 601
I + PE ++ + S D++S+G++L E+FT
Sbjct: 181 IFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 99/228 (43%), Gaps = 38/228 (16%)
Query: 391 FSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILR 449
F+K IG GSFG V+KG +VAIK++ L++ + + +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEE-----------AEDEIEDIQQEIT 57
Query: 450 VITACSS---VDLEGNDFK----ALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNI 502
V++ C S G+ K ++ E++ G+ L P P + Q ++ I R
Sbjct: 58 VLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQ---IATILR--- 111
Query: 503 AIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQT 562
++ LDYLH H D+K +NVLL + + DFG+A +++D K
Sbjct: 112 --EILKGLDYLHSEKKI---HRDIKAANVLLSEHGEVKLADFGVAG---QLTDTQIKRNX 163
Query: 563 VSIGLKGSIGYIPPEHM-NGQVSILGDIYSYGILLLEMFTGKRPTGDM 609
G+ ++ PE + DI+S GI +E+ G+ P ++
Sbjct: 164 FV----GTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSEL 207
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 100/227 (44%), Gaps = 33/227 (14%)
Query: 387 STDNFSKENLIGTGSFGSVY----KGTLGDGTIVAIKVLKLQ---QQGALKSFIDECNAL 439
+ ++F L+G G+FG V K T G A+K+L+ + + + + E L
Sbjct: 3 TMNDFDYLKLLGKGTFGKVILVREKAT---GRYYAMKILRKEVIIAKDEVAHTVTESRVL 59
Query: 440 KSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQR 499
++TRH +TA + +D V E+ + G L + H S + ++
Sbjct: 60 QNTRHP----FLTALKYA-FQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARFY-- 110
Query: 500 LNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSK 559
++ SAL+YLH + + D+K N++LDKD + DFGL K ISD +
Sbjct: 111 ---GAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATM 162
Query: 560 NQTVSIGLKGSIGYIPPEHM-NGQVSILGDIYSYGILLLEMFTGKRP 605
G+ Y+ PE + + D + G+++ EM G+ P
Sbjct: 163 KXFC-----GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 92/224 (41%), Gaps = 29/224 (12%)
Query: 387 STDNFSKENLIGTGSFGSVYKGTLGDGT-IVAIKVL---KLQQQGALKSFIDECNALKST 442
+ D+F +G G FG+VY IVA+KVL +++++G E
Sbjct: 21 TIDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHL 80
Query: 443 RHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNI 502
H NILR+ L+ E+ G L + L S Q + I
Sbjct: 81 HHPNILRLYNY-----FYDRRRIYLILEYAPRGELYKELQKSCTFDEQ-------RTATI 128
Query: 503 AIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQT 562
++A AL Y H + H D+KP N+LL + DFG + PS +
Sbjct: 129 MEELADALMYCH---GKKVIHRDIKPENLLLGLKGELKIADFGWS------VHAPSLRRK 179
Query: 563 VSIGLKGSIGYIPPEHMNGQVSILG-DIYSYGILLLEMFTGKRP 605
+ G++ Y+PPE + G++ D++ G+L E+ G P
Sbjct: 180 T---MCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPP 220
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 93/225 (41%), Gaps = 36/225 (16%)
Query: 389 DNFSKENLIGTGSFGSVY-KGTLGDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNI 447
D F + +GTGSFG V + G A+K+L Q+ LK N + I
Sbjct: 27 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN------EKRI 80
Query: 448 LRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLN------ 501
L+ + V LE F F N NL + P F L I R +
Sbjct: 81 LQAVNFPFLVKLE--------FSFKDNSNLYMVMEYVPGGE-MFSHLRRIGRFSEPHARF 131
Query: 502 IAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQ 561
A + +YLH + + DLKP N+L+D+ V DFG AK + K +
Sbjct: 132 YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--------KGR 180
Query: 562 TVSIGLKGSIGYIPPE-HMNGQVSILGDIYSYGILLLEMFTGKRP 605
T + L G+ Y+ PE ++ + D ++ G+L+ EM G P
Sbjct: 181 TWT--LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 223
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 100/227 (44%), Gaps = 33/227 (14%)
Query: 387 STDNFSKENLIGTGSFGSVY----KGTLGDGTIVAIKVLKLQ---QQGALKSFIDECNAL 439
+ ++F L+G G+FG V K T G A+K+L+ + + + + E L
Sbjct: 3 TMNDFDYLKLLGKGTFGKVILVREKAT---GRYYAMKILRKEVIIAKDEVAHTVTESRVL 59
Query: 440 KSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQR 499
++TRH +TA + +D V E+ + G L + H S + ++
Sbjct: 60 QNTRHP----FLTALKYA-FQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARFY-- 110
Query: 500 LNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSK 559
++ SAL+YLH + + D+K N++LDKD + DFGL K ISD +
Sbjct: 111 ---GAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATM 162
Query: 560 NQTVSIGLKGSIGYIPPEHM-NGQVSILGDIYSYGILLLEMFTGKRP 605
G+ Y+ PE + + D + G+++ EM G+ P
Sbjct: 163 KXFC-----GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 92/225 (40%), Gaps = 36/225 (16%)
Query: 389 DNFSKENLIGTGSFGSVY-KGTLGDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNI 447
D F + +GTGSFG V + G A+K+L Q+ LK N + I
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN------EKRI 94
Query: 448 LRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLN------ 501
L+ + V LE F F N NL + +P F L I R +
Sbjct: 95 LQAVNFPFLVKLE--------FSFKDNSNLYMVMEYAPGGE-MFSHLRRIGRFSEPHARF 145
Query: 502 IAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQ 561
A + +YLH + + DLKP N+++D+ V DFG AK + +
Sbjct: 146 YAAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIQVTDFGFAK----------RVK 192
Query: 562 TVSIGLKGSIGYIPPE-HMNGQVSILGDIYSYGILLLEMFTGKRP 605
+ L G+ Y+ PE ++ + D ++ G+L+ EM G P
Sbjct: 193 GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 101/241 (41%), Gaps = 52/241 (21%)
Query: 391 FSKENL-----IGTGSFGSVYKGT---LG--DGTI-VAIKVLKLQQQGALKSFIDECNAL 439
F + NL +G G+FG V + T LG D + VA+K+LK DE AL
Sbjct: 43 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHA------DEKEAL 96
Query: 440 KST--------RHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQF 491
S +H NI+ ++ AC+ G ++ E+ G+L +L
Sbjct: 97 MSELKIMSHLGQHENIVNLLGACT----HGGPV-LVITEYCCYGDLLNFLRRKS------ 145
Query: 492 KKLSVIQRLNIAIDVASALDYLHHHCDTP----------IAHCDLKPSNVLLDKDMTAHV 541
+ L IA AS D LH H D+ NVLL A +
Sbjct: 146 RVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKI 205
Query: 542 GDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNGQV-SILGDIYSYGILLLEMF 600
GDFGLA+ + S N V + + ++ PE + V ++ D++SYGILL E+F
Sbjct: 206 GDFGLARDIMNDS-----NYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIF 260
Query: 601 T 601
+
Sbjct: 261 S 261
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 92/212 (43%), Gaps = 24/212 (11%)
Query: 397 IGTGSFGSV---YKGTLGD--GTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRVI 451
+G G+FGSV LGD G +VA+K L+ + F E LK+ I++
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 90
Query: 452 TACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALD 511
G LV E++ +G L +L A +L + L + + ++
Sbjct: 91 GVSYG---PGRQSLRLVMEYLPSGCLRDFLQRHRA------RLDASRLLLYSSQICKGME 141
Query: 512 YL-HHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGS 570
YL C H DL N+L++ + + DFGLAK L D V +
Sbjct: 142 YLGSRRC----VHRDLAARNILVESEAHVKIADFGLAKLLPLDKD----YYVVREPGQSP 193
Query: 571 IGYIPPEHMNGQV-SILGDIYSYGILLLEMFT 601
I + PE ++ + S D++S+G++L E+FT
Sbjct: 194 IFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 100/227 (44%), Gaps = 33/227 (14%)
Query: 387 STDNFSKENLIGTGSFGSVY----KGTLGDGTIVAIKVLKLQ---QQGALKSFIDECNAL 439
+ ++F L+G G+FG V K T G A+K+L+ + + + + E L
Sbjct: 3 TMNDFDYLKLLGKGTFGKVILVREKAT---GRYYAMKILRKEVIIAKDEVAHTVTESRVL 59
Query: 440 KSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQR 499
++TRH +TA + +D V E+ + G L + H S + ++
Sbjct: 60 QNTRHP----FLTALKYA-FQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARFY-- 110
Query: 500 LNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSK 559
++ SAL+YLH + + D+K N++LDKD + DFGL K ISD +
Sbjct: 111 ---GAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATM 162
Query: 560 NQTVSIGLKGSIGYIPPEHM-NGQVSILGDIYSYGILLLEMFTGKRP 605
G+ Y+ PE + + D + G+++ EM G+ P
Sbjct: 163 KTFC-----GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 100/227 (44%), Gaps = 33/227 (14%)
Query: 387 STDNFSKENLIGTGSFGSVY----KGTLGDGTIVAIKVLKLQ---QQGALKSFIDECNAL 439
+ ++F L+G G+FG V K T G A+K+L+ + + + + E L
Sbjct: 6 TMNDFDYLKLLGKGTFGKVILVREKAT---GRYYAMKILRKEVIIAKDEVAHTVTESRVL 62
Query: 440 KSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQR 499
++TRH +TA + +D V E+ + G L + H S + ++
Sbjct: 63 QNTRHP----FLTALKYA-FQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARFY-- 113
Query: 500 LNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSK 559
++ SAL+YLH + + D+K N++LDKD + DFGL K ISD +
Sbjct: 114 ---GAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATM 165
Query: 560 NQTVSIGLKGSIGYIPPEHM-NGQVSILGDIYSYGILLLEMFTGKRP 605
G+ Y+ PE + + D + G+++ EM G+ P
Sbjct: 166 KTFC-----GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 207
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 106/259 (40%), Gaps = 47/259 (18%)
Query: 397 IGTGSFGSVYKGTLGDGTIVAIKVLKLQQQG--ALKSFIDECNAL-KSTRHRN-ILRVIT 452
IG+G V++ I AIK + L++ L S+ +E L K +H + I+R+
Sbjct: 20 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRL-- 77
Query: 453 ACSSVDLEGNDFKALVFEFMSNGNLD--QWLHPSPAEHYQFKKLSVIQRLNIAIDVASAL 510
D E D ++ M GN+D WL K + +R + ++ A+
Sbjct: 78 ----YDYEITD--QYIYMVMECGNIDLNSWLKKK-------KSIDPWERKSYWKNMLEAV 124
Query: 511 DYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGS 570
+H H I H DLKP+N L+ M + DFG+A + P V G+
Sbjct: 125 HTIHQHG---IVHSDLKPANFLIVDGMLKLI-DFGIANQM-----QPDTTSVVKDSQVGT 175
Query: 571 IGYIPPEHMNGQVS------------ILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHM 618
+ Y+PPE + S D++S G +L M GK P + +H
Sbjct: 176 VNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHA 235
Query: 619 FVSMALPDHVMDILDPSMP 637
+ P+H ++ P +P
Sbjct: 236 IID---PNHEIEF--PDIP 249
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 98/227 (43%), Gaps = 32/227 (14%)
Query: 387 STDNFSKENLIGTGSFGSVY----KGTLGDGTIVAIKVLKLQ---QQGALKSFIDECNAL 439
+ + F L+G G+FG V K T G A+K+LK + + + + E L
Sbjct: 6 TMNEFEYLKLLGKGTFGKVILVKEKAT---GRYYAMKILKKEVIVAKDEVAHTLTENRVL 62
Query: 440 KSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQR 499
+++RH +TA + +D V E+ + G L + H S + S +
Sbjct: 63 QNSRHP----FLTALK-YSFQTHDRLCFVMEYANGGEL--FFHLSRE-----RVFSEDRA 110
Query: 500 LNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSK 559
++ SALDYLH + + + DLK N++LDKD + DFGL K K
Sbjct: 111 RFYGAEIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK-------EGIK 161
Query: 560 NQTVSIGLKGSIGYIPPEHM-NGQVSILGDIYSYGILLLEMFTGKRP 605
+ G+ Y+ PE + + D + G+++ EM G+ P
Sbjct: 162 DGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 208
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 106/259 (40%), Gaps = 47/259 (18%)
Query: 397 IGTGSFGSVYKGTLGDGTIVAIKVLKLQQQG--ALKSFIDECNAL-KSTRHRN-ILRVIT 452
IG+G V++ I AIK + L++ L S+ +E L K +H + I+R+
Sbjct: 17 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRL-- 74
Query: 453 ACSSVDLEGNDFKALVFEFMSNGNLD--QWLHPSPAEHYQFKKLSVIQRLNIAIDVASAL 510
D E D ++ M GN+D WL K + +R + ++ A+
Sbjct: 75 ----YDYEITD--QYIYMVMECGNIDLNSWLKKK-------KSIDPWERKSYWKNMLEAV 121
Query: 511 DYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGS 570
+H H I H DLKP+N L+ M + DFG+A + P V G+
Sbjct: 122 HTIHQHG---IVHSDLKPANFLIVDGMLKLI-DFGIANQM-----QPDTTSVVKDSQVGT 172
Query: 571 IGYIPPEHMNGQVS------------ILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHM 618
+ Y+PPE + S D++S G +L M GK P + +H
Sbjct: 173 VNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHA 232
Query: 619 FVSMALPDHVMDILDPSMP 637
+ P+H ++ P +P
Sbjct: 233 IID---PNHEIEF--PDIP 246
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 93/228 (40%), Gaps = 42/228 (18%)
Query: 389 DNFSKENLIGTGSFGSV----YKGTLGDGTIVAIKVLKLQQQGALKSFIDECNALKSTRH 444
D F + +GTGSFG V +K T G A+K+L Q+ LK N
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKET---GNHYAMKILDKQKVVKLKQIEHTLN------E 84
Query: 445 RNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLN--- 501
+ IL+ + V LE F F N NL + P F L I R +
Sbjct: 85 KRILQAVNFPFLVKLE--------FSFKDNSNLYMVMEYVPGGE-MFSHLRRIGRFSEPH 135
Query: 502 ---IAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPS 558
A + +YLH + + DLKP N+L+D+ V DFG AK
Sbjct: 136 ARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK---------- 182
Query: 559 KNQTVSIGLKGSIGYIPPE-HMNGQVSILGDIYSYGILLLEMFTGKRP 605
+ + + L G+ Y+ PE ++ + D ++ G+L+ EM G P
Sbjct: 183 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 230
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 98/229 (42%), Gaps = 35/229 (15%)
Query: 388 TDNFSKENLIGTGSFGSVYKGTLGDGTIVAIKVLKLQQQGALKS-----FIDECNALKST 442
++ + + +G+G++G V D + +K+ ++ ++ + ++E LK
Sbjct: 36 SEMYQRVKKLGSGAYGEVL--LCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLL 93
Query: 443 RHRNILRVITACSSVDLEGNDFKALVFEFMSNGNL-DQWLHPSPAEHYQFKKLSVIQRLN 501
H NI+++ E LV E G L D+ +H K + +
Sbjct: 94 DHPNIMKLYDF-----FEDKRNYYLVMECYKGGELFDEIIHRM--------KFNEVDAAV 140
Query: 502 IAIDVASALDYLHHHCDTPIAHCDLKPSNVLLD---KDMTAHVGDFGLAKFLFEISDNPS 558
I V S + YLH H I H DLKP N+LL+ KD + DFGL+ +FE
Sbjct: 141 IIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLSA-VFE------ 190
Query: 559 KNQTVSIGLKGSIGYIPPEHMNGQVSILGDIYSYGILLLEMFTGKRPTG 607
NQ G+ YI PE + + D++S G++L + G P G
Sbjct: 191 -NQKKMKERLGTAYYIAPEVLRKKYDEKCDVWSIGVILFILLAGYPPFG 238
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 106/259 (40%), Gaps = 47/259 (18%)
Query: 397 IGTGSFGSVYKGTLGDGTIVAIKVLKLQQQG--ALKSFIDECNAL-KSTRHRN-ILRVIT 452
IG+G V++ I AIK + L++ L S+ +E L K +H + I+R+
Sbjct: 36 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRL-- 93
Query: 453 ACSSVDLEGNDFKALVFEFMSNGNLD--QWLHPSPAEHYQFKKLSVIQRLNIAIDVASAL 510
D E D ++ M GN+D WL K + +R + ++ A+
Sbjct: 94 ----YDYEITD--QYIYMVMECGNIDLNSWLKKK-------KSIDPWERKSYWKNMLEAV 140
Query: 511 DYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGS 570
+H H I H DLKP+N L+ M + DFG+A + P V G+
Sbjct: 141 HTIHQHG---IVHSDLKPANFLIVDGMLKLI-DFGIANQM-----QPDTTSVVKDSQVGT 191
Query: 571 IGYIPPEHMNGQVS------------ILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHM 618
+ Y+PPE + S D++S G +L M GK P + +H
Sbjct: 192 VNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHA 251
Query: 619 FVSMALPDHVMDILDPSMP 637
+ P+H ++ P +P
Sbjct: 252 IID---PNHEIEF--PDIP 265
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 99/227 (43%), Gaps = 32/227 (14%)
Query: 387 STDNFSKENLIGTGSFGSVY----KGTLGDGTIVAIKVLKLQ---QQGALKSFIDECNAL 439
+ + F L+G G+FG V K T G A+K+LK + + + + E L
Sbjct: 149 TMNEFEYLKLLGKGTFGKVILVKEKAT---GRYYAMKILKKEVIVAKDEVAHTLTENRVL 205
Query: 440 KSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQR 499
+++RH +TA + +D V E+ + G L + H S + + S +
Sbjct: 206 QNSRHP----FLTALK-YSFQTHDRLCFVMEYANGGEL--FFHLS-----RERVFSEDRA 253
Query: 500 LNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSK 559
++ SALDYLH + + + DLK N++LDKD + DFGL K K
Sbjct: 254 RFYGAEIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK-------EGIK 304
Query: 560 NQTVSIGLKGSIGYIPPEHM-NGQVSILGDIYSYGILLLEMFTGKRP 605
+ G+ Y+ PE + + D + G+++ EM G+ P
Sbjct: 305 DGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 351
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 100/231 (43%), Gaps = 32/231 (13%)
Query: 383 DISKSTDNFSKENLIGTGSFGSVY----KGTLGDGTIVAIKVLKLQ---QQGALKSFIDE 435
D + + F L+G G+FG V K T G A+K+LK + + + + E
Sbjct: 4 DPRVTMNEFEYLKLLGKGTFGKVILVKEKAT---GRYYAMKILKKEVIVAKDEVAHTLTE 60
Query: 436 CNALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLS 495
L+++RH +TA + +D V E+ + G L + H S + + S
Sbjct: 61 NRVLQNSRHP----FLTALK-YSFQTHDRLCFVMEYANGGEL--FFHLS-----RERVFS 108
Query: 496 VIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISD 555
+ ++ SALDYLH + + + DLK N++LDKD + DFGL K
Sbjct: 109 EDRARFYGAEIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK------- 159
Query: 556 NPSKNQTVSIGLKGSIGYIPPEHM-NGQVSILGDIYSYGILLLEMFTGKRP 605
K+ G+ Y+ PE + + D + G+++ EM G+ P
Sbjct: 160 EGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 210
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 99/227 (43%), Gaps = 32/227 (14%)
Query: 387 STDNFSKENLIGTGSFGSVY----KGTLGDGTIVAIKVLKLQ---QQGALKSFIDECNAL 439
+ + F L+G G+FG V K T G A+K+LK + + + + E L
Sbjct: 7 TMNEFEYLKLLGKGTFGKVILVKEKAT---GRYYAMKILKKEVIVAKDEVAHTLTENRVL 63
Query: 440 KSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQR 499
+++RH +TA + +D V E+ + G L + H S + + S +
Sbjct: 64 QNSRHP----FLTALK-YSFQTHDRLCFVMEYANGGEL--FFHLS-----RERVFSEDRA 111
Query: 500 LNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSK 559
++ SALDYLH + + + DLK N++LDKD + DFGL K K
Sbjct: 112 RFYGAEIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK-------EGIK 162
Query: 560 NQTVSIGLKGSIGYIPPEHM-NGQVSILGDIYSYGILLLEMFTGKRP 605
+ G+ Y+ PE + + D + G+++ EM G+ P
Sbjct: 163 DGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 106/259 (40%), Gaps = 47/259 (18%)
Query: 397 IGTGSFGSVYKGTLGDGTIVAIKVLKLQQQG--ALKSFIDECNAL-KSTRHRN-ILRVIT 452
IG+G V++ I AIK + L++ L S+ +E L K +H + I+R+
Sbjct: 16 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRL-- 73
Query: 453 ACSSVDLEGNDFKALVFEFMSNGNLD--QWLHPSPAEHYQFKKLSVIQRLNIAIDVASAL 510
D E D ++ M GN+D WL K + +R + ++ A+
Sbjct: 74 ----YDYEITD--QYIYMVMECGNIDLNSWLKKK-------KSIDPWERKSYWKNMLEAV 120
Query: 511 DYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGS 570
+H H I H DLKP+N L+ M + DFG+A + P V G+
Sbjct: 121 HTIHQHG---IVHSDLKPANFLIVDGMLKLI-DFGIANQM-----QPDTTSVVKDSQVGT 171
Query: 571 IGYIPPEHMNGQVS------------ILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHM 618
+ Y+PPE + S D++S G +L M GK P + +H
Sbjct: 172 VNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHA 231
Query: 619 FVSMALPDHVMDILDPSMP 637
+ P+H ++ P +P
Sbjct: 232 IID---PNHEIEF--PDIP 245
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 99/227 (43%), Gaps = 32/227 (14%)
Query: 387 STDNFSKENLIGTGSFGSVY----KGTLGDGTIVAIKVLKLQ---QQGALKSFIDECNAL 439
+ + F L+G G+FG V K T G A+K+LK + + + + E L
Sbjct: 146 TMNEFEYLKLLGKGTFGKVILVKEKAT---GRYYAMKILKKEVIVAKDEVAHTLTENRVL 202
Query: 440 KSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQR 499
+++RH +TA + +D V E+ + G L + H S + + S +
Sbjct: 203 QNSRHP----FLTALK-YSFQTHDRLCFVMEYANGGEL--FFHLS-----RERVFSEDRA 250
Query: 500 LNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSK 559
++ SALDYLH + + + DLK N++LDKD + DFGL K K
Sbjct: 251 RFYGAEIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK-------EGIK 301
Query: 560 NQTVSIGLKGSIGYIPPEHM-NGQVSILGDIYSYGILLLEMFTGKRP 605
+ G+ Y+ PE + + D + G+++ EM G+ P
Sbjct: 302 DGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 348
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 94/228 (41%), Gaps = 42/228 (18%)
Query: 389 DNFSKENLIGTGSFGSV----YKGTLGDGTIVAIKVLKLQQQGALKSFIDECNALKSTRH 444
D F + +GTGSFG V +K T G A+K+L Q+ LK N
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKET---GNHYAMKILDKQKVVKLKQIEHTLN------E 92
Query: 445 RNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLN--- 501
+ IL+ + V LE F F N NL + +P F L I R +
Sbjct: 93 KRILQAVNFPFLVKLE--------FSFKDNSNLYMVMEYAPGGE-MFSHLRRIGRFSEPH 143
Query: 502 ---IAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPS 558
A + +YLH + + DLKP N+++D+ V DFG AK
Sbjct: 144 ARFYAAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK---------- 190
Query: 559 KNQTVSIGLKGSIGYIPPE-HMNGQVSILGDIYSYGILLLEMFTGKRP 605
+ + + L G+ Y+ PE ++ + D ++ G+L+ EM G P
Sbjct: 191 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 93/228 (40%), Gaps = 42/228 (18%)
Query: 389 DNFSKENLIGTGSFGSV----YKGTLGDGTIVAIKVLKLQQQGALKSFIDECNALKSTRH 444
D F + +GTGSFG V +K T G A+K+L Q+ LK N
Sbjct: 42 DQFERIRTLGTGSFGRVMLVKHKET---GNHYAMKILDKQKVVKLKQIEHTLN------E 92
Query: 445 RNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLN--- 501
+ I + + V LE F F N NL L +P F L I R +
Sbjct: 93 KRIQQAVNFPFLVKLE--------FSFKDNSNLYMVLEYAPGGE-MFSHLRRIGRFSEPH 143
Query: 502 ---IAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPS 558
A + +YLH + + DLKP N+L+D+ V DFG AK
Sbjct: 144 ARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAK---------- 190
Query: 559 KNQTVSIGLKGSIGYIPPE-HMNGQVSILGDIYSYGILLLEMFTGKRP 605
+ + + L G+ Y+ PE ++ + D ++ G+L+ EM G P
Sbjct: 191 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 96/229 (41%), Gaps = 32/229 (13%)
Query: 390 NFSKENLIGTGSFGSVYKGT-LGDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNIL 448
+ +++IG G V + G A+K++++ + ++E + R +IL
Sbjct: 95 KYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVRE-ATRRETHIL 153
Query: 449 RVITACSSV-----DLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIA 503
R + + E + F LVF+ M G L +L A LS + +I
Sbjct: 154 RQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVA-------LSEKETRSIM 206
Query: 504 IDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTV 563
+ A+ +LH + I H DLKP N+LLD +M + DFG + L P +
Sbjct: 207 RSLLEAVSFLHANN---IVHRDLKPENILLDDNMQIRLSDFGFSCHL-----EPGEKLR- 257
Query: 564 SIGLKGSIGYIPPEHMNGQVSILG-------DIYSYGILLLEMFTGKRP 605
L G+ GY+ PE + + D+++ G++L + G P
Sbjct: 258 --ELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPP 304
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 93/228 (40%), Gaps = 42/228 (18%)
Query: 389 DNFSKENLIGTGSFGSV----YKGTLGDGTIVAIKVLKLQQQGALKSFIDECNALKSTRH 444
D F + +GTGSFG V +K T G A+K+L Q+ LK N
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKET---GNHYAMKILDKQKVVKLKQIEHTLN------E 92
Query: 445 RNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLN--- 501
+ IL+ + V LE F F N NL + P F L I R +
Sbjct: 93 KRILQAVNFPFLVKLE--------FSFKDNSNLYMVMEYVPGGE-MFSHLRRIGRFSEPH 143
Query: 502 ---IAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPS 558
A + +YLH + + DLKP N+L+D+ V DFG AK
Sbjct: 144 ARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK---------- 190
Query: 559 KNQTVSIGLKGSIGYIPPE-HMNGQVSILGDIYSYGILLLEMFTGKRP 605
+ + + L G+ Y+ PE ++ + D ++ G+L+ EM G P
Sbjct: 191 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 91/225 (40%), Gaps = 36/225 (16%)
Query: 389 DNFSKENLIGTGSFGSVY-KGTLGDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNI 447
D F + +GTGSFG V + G A+K+L Q+ LK N + I
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN------EKRI 95
Query: 448 LRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLN------ 501
L+ + V LE F F N NL + P F L I R +
Sbjct: 96 LQAVNFPFLVKLE--------FSFKDNSNLYMVMEYVPGGE-MFSHLRRIGRFSEPHARF 146
Query: 502 IAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQ 561
A + +YLH + + DLKP N+L+D+ V DFG AK + +
Sbjct: 147 YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----------RVK 193
Query: 562 TVSIGLKGSIGYIPPE-HMNGQVSILGDIYSYGILLLEMFTGKRP 605
+ L G+ Y+ PE ++ + D ++ G+L+ EM G P
Sbjct: 194 GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 100/229 (43%), Gaps = 42/229 (18%)
Query: 397 IGTGSFGSVYKG------TLGDGTIVAIKVLKLQQQGALKSFIDECNALKST-------- 442
+G G+FG V + VA+K+LK +GA S E AL S
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLK---EGATHS---EHRALMSELKILIHIG 79
Query: 443 RHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKK--------- 493
H N++ ++ AC+ G ++ EF GNL +L E +K
Sbjct: 80 HHLNVVNLLGACTK---PGGPL-MVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF 135
Query: 494 LSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEI 553
L++ + + VA +++L H DL N+LL + + DFGLA+ +++
Sbjct: 136 LTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 192
Query: 554 SDNPSKNQTVSIGLKGSIGYIPPEHMNGQV-SILGDIYSYGILLLEMFT 601
D K + + ++ PE + +V +I D++S+G+LL E+F+
Sbjct: 193 PDYVRKGDA-----RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 93/228 (40%), Gaps = 42/228 (18%)
Query: 389 DNFSKENLIGTGSFGSV----YKGTLGDGTIVAIKVLKLQQQGALKSFIDECNALKSTRH 444
D F + +GTGSFG V +K T G A+K+L Q+ LK N
Sbjct: 62 DQFERIKTLGTGSFGRVMLVKHKET---GNHYAMKILDKQKVVKLKQIEHTLN------E 112
Query: 445 RNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLN--- 501
+ IL+ + V LE F F N NL + P F L I R +
Sbjct: 113 KRILQAVNFPFLVKLE--------FSFKDNSNLYMVMEYVPGGE-MFSHLRRIGRFSEPH 163
Query: 502 ---IAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPS 558
A + +YLH + + DLKP N+L+D+ V DFG AK
Sbjct: 164 ARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK---------- 210
Query: 559 KNQTVSIGLKGSIGYIPPE-HMNGQVSILGDIYSYGILLLEMFTGKRP 605
+ + + L G+ Y+ PE ++ + D ++ G+L+ EM G P
Sbjct: 211 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 105/234 (44%), Gaps = 42/234 (17%)
Query: 391 FSKENL-----IGTGSFGSVYKGT---LG--DGTI-VAIKVLKLQQQGALKSFIDECNAL 439
F + NL +G G+FG V + T LG D + VA+K+LK DE AL
Sbjct: 35 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHA------DEKEAL 88
Query: 440 KST--------RHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLH---PSPAEH 488
S +H NI+ ++ AC+ G ++ E+ G+L +L + +
Sbjct: 89 MSELKIMSHLGQHENIVNLLGACT----HGGPV-LVITEYCCYGDLLNFLRRKAEADLDK 143
Query: 489 YQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAK 548
+ L + L+ + VA + +L H D+ NVLL A +GDFGLA+
Sbjct: 144 EDGRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR 200
Query: 549 FLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNGQV-SILGDIYSYGILLLEMFT 601
+ S N V + + ++ PE + V ++ D++SYGILL E+F+
Sbjct: 201 DIMNDS-----NYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 92/225 (40%), Gaps = 36/225 (16%)
Query: 389 DNFSKENLIGTGSFGSVY-KGTLGDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNI 447
D F + +GTGSFG V + G A+K+L Q+ LK N + I
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN------EKRI 94
Query: 448 LRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLN------ 501
L+ + V LE F F N NL + +P F L I R +
Sbjct: 95 LQAVNFPFLVKLE--------FSFKDNSNLYMVMEYAPGGE-MFSHLRRIGRFSEPHARF 145
Query: 502 IAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQ 561
A + +YLH + + DLKP N+++D+ V DFG AK + +
Sbjct: 146 YAAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK----------RVK 192
Query: 562 TVSIGLKGSIGYIPPE-HMNGQVSILGDIYSYGILLLEMFTGKRP 605
+ L G+ Y+ PE ++ + D ++ G+L+ EM G P
Sbjct: 193 GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 93/228 (40%), Gaps = 42/228 (18%)
Query: 389 DNFSKENLIGTGSFGSV----YKGTLGDGTIVAIKVLKLQQQGALKSFIDECNALKSTRH 444
D F + +GTGSFG V +K T G A+K+L Q+ LK N
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKET---GNHYAMKILDKQKVVKLKQIEHTLN------E 92
Query: 445 RNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLN--- 501
+ IL+ + V LE F F N NL + P F L I R +
Sbjct: 93 KRILQAVNFPFLVKLE--------FSFKDNSNLYMVMEYVPGGE-MFSHLRRIGRFSEPH 143
Query: 502 ---IAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPS 558
A + +YLH + + DLKP N+L+D+ V DFG AK
Sbjct: 144 ARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK---------- 190
Query: 559 KNQTVSIGLKGSIGYIPPE-HMNGQVSILGDIYSYGILLLEMFTGKRP 605
+ + + L G+ Y+ PE ++ + D ++ G+L+ EM G P
Sbjct: 191 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 100/229 (43%), Gaps = 42/229 (18%)
Query: 397 IGTGSFGSVYKG------TLGDGTIVAIKVLKLQQQGALKSFIDECNALKST-------- 442
+G G+FG V + VA+K+LK +GA S E AL S
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLK---EGATHS---EHRALMSELKILIHIG 79
Query: 443 RHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKK--------- 493
H N++ ++ AC+ G ++ EF GNL +L E +K
Sbjct: 80 HHLNVVNLLGACTK---PGGPL-MVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF 135
Query: 494 LSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEI 553
L++ + + VA +++L H DL N+LL + + DFGLA+ +++
Sbjct: 136 LTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 192
Query: 554 SDNPSKNQTVSIGLKGSIGYIPPEHMNGQV-SILGDIYSYGILLLEMFT 601
D K + + ++ PE + +V +I D++S+G+LL E+F+
Sbjct: 193 PDYVRKGDA-----RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 93/228 (40%), Gaps = 42/228 (18%)
Query: 389 DNFSKENLIGTGSFGSV----YKGTLGDGTIVAIKVLKLQQQGALKSFIDECNALKSTRH 444
D F + +GTGSFG V +K T G A+K+L Q+ LK N
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKET---GNHYAMKILDKQKVVKLKQIEHTLN------E 92
Query: 445 RNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLN--- 501
+ IL+ + V LE F F N NL + P F L I R +
Sbjct: 93 KRILQAVNFPFLVKLE--------FSFKDNSNLYMVMEYVPGGE-MFSHLRRIGRFSEPH 143
Query: 502 ---IAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPS 558
A + +YLH + + DLKP N+L+D+ V DFG AK
Sbjct: 144 ARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK---------- 190
Query: 559 KNQTVSIGLKGSIGYIPPE-HMNGQVSILGDIYSYGILLLEMFTGKRP 605
+ + + L G+ Y+ PE ++ + D ++ G+L+ EM G P
Sbjct: 191 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 91/225 (40%), Gaps = 36/225 (16%)
Query: 389 DNFSKENLIGTGSFGSVY-KGTLGDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNI 447
D F + +GTGSFG V + G A+K+L Q+ LK N + I
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN------EKRI 94
Query: 448 LRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLN------ 501
L+ + V LE F F N NL + P F L I R +
Sbjct: 95 LQAVNFPFLVKLE--------FSFKDNSNLYMVMEYVPGGE-MFSHLRRIGRFSEPHARF 145
Query: 502 IAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQ 561
A + +YLH + + DLKP N+L+D+ V DFG AK + +
Sbjct: 146 YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----------RVK 192
Query: 562 TVSIGLKGSIGYIPPE-HMNGQVSILGDIYSYGILLLEMFTGKRP 605
+ L G+ Y+ PE ++ + D ++ G+L+ EM G P
Sbjct: 193 GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 91/225 (40%), Gaps = 36/225 (16%)
Query: 389 DNFSKENLIGTGSFGSVY-KGTLGDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNI 447
D F + +GTGSFG V + G A+K+L Q+ LK N + I
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN------EKRI 94
Query: 448 LRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLN------ 501
L+ + V LE F F N NL + P F L I R +
Sbjct: 95 LQAVNFPFLVKLE--------FSFKDNSNLYMVMEYVPGGE-MFSHLRRIGRFSEPHARF 145
Query: 502 IAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQ 561
A + +YLH + + DLKP N+L+D+ V DFG AK + +
Sbjct: 146 YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----------RVK 192
Query: 562 TVSIGLKGSIGYIPPE-HMNGQVSILGDIYSYGILLLEMFTGKRP 605
+ L G+ Y+ PE ++ + D ++ G+L+ EM G P
Sbjct: 193 GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 106/259 (40%), Gaps = 47/259 (18%)
Query: 397 IGTGSFGSVYKGTLGDGTIVAIKVLKLQQQG--ALKSFIDECNAL-KSTRHRN-ILRVIT 452
IG+G V++ I AIK + L++ L S+ +E L K +H + I+R+
Sbjct: 36 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRL-- 93
Query: 453 ACSSVDLEGNDFKALVFEFMSNGNLD--QWLHPSPAEHYQFKKLSVIQRLNIAIDVASAL 510
D E D ++ M GN+D WL K + +R + ++ A+
Sbjct: 94 ----YDYEITD--QYIYMVMECGNIDLNSWLKKK-------KSIDPWERKSYWKNMLEAV 140
Query: 511 DYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGS 570
+H H I H DLKP+N L+ M + DFG+A + P V G+
Sbjct: 141 HTIHQHG---IVHSDLKPANFLIVDGMLKLI-DFGIANQM-----QPDXXXVVKDSQVGT 191
Query: 571 IGYIPPEHMNGQVS------------ILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHM 618
+ Y+PPE + S D++S G +L M GK P + +H
Sbjct: 192 VNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHA 251
Query: 619 FVSMALPDHVMDILDPSMP 637
+ P+H ++ P +P
Sbjct: 252 IID---PNHEIEF--PDIP 265
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 98/228 (42%), Gaps = 38/228 (16%)
Query: 391 FSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILR 449
F+K IG GSFG V+KG +VAIK++ L+ + + +
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLE-----------EAEDEIEDIQQEIT 72
Query: 450 VITACSS---VDLEGNDFK----ALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNI 502
V++ C S G+ K ++ E++ G+ L P P + Q ++ I R
Sbjct: 73 VLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQ---IATILR--- 126
Query: 503 AIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQT 562
++ LDYLH H D+K +NVLL + + DFG+A +++D K
Sbjct: 127 --EILKGLDYLHSEKKI---HRDIKAANVLLSEHGEVKLADFGVAG---QLTDTQIKRNX 178
Query: 563 VSIGLKGSIGYIPPEHM-NGQVSILGDIYSYGILLLEMFTGKRPTGDM 609
G+ ++ PE + DI+S GI +E+ G+ P ++
Sbjct: 179 FV----GTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSEL 222
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 106/259 (40%), Gaps = 47/259 (18%)
Query: 397 IGTGSFGSVYKGTLGDGTIVAIKVLKLQQQG--ALKSFIDECNAL-KSTRHRN-ILRVIT 452
IG+G V++ I AIK + L++ L S+ +E L K +H + I+R+
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRL-- 121
Query: 453 ACSSVDLEGNDFKALVFEFMSNGNLD--QWLHPSPAEHYQFKKLSVIQRLNIAIDVASAL 510
D E D ++ M GN+D WL K + +R + ++ A+
Sbjct: 122 ----YDYEITD--QYIYMVMECGNIDLNSWLKKK-------KSIDPWERKSYWKNMLEAV 168
Query: 511 DYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGS 570
+H H I H DLKP+N L+ M + DFG+A + P V G+
Sbjct: 169 HTIHQHG---IVHSDLKPANFLIVDGMLKLI-DFGIANQM-----QPDTTSVVKDSQVGT 219
Query: 571 IGYIPPEHMNGQVS------------ILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHM 618
+ Y+PPE + S D++S G +L M GK P + +H
Sbjct: 220 VNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHA 279
Query: 619 FVSMALPDHVMDILDPSMP 637
+ P+H ++ P +P
Sbjct: 280 IID---PNHEIEF--PDIP 293
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 99/229 (43%), Gaps = 42/229 (18%)
Query: 397 IGTGSFGSVYKG------TLGDGTIVAIKVLKLQQQGALKSFIDECNALKST-------- 442
+G G+FG V + VA+K+LK +GA S E AL S
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLK---EGATHS---EHRALMSELKILIHIG 79
Query: 443 RHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKK--------- 493
H N++ ++ AC+ G +V EF GNL +L E +K
Sbjct: 80 HHLNVVNLLGACTK---PGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF 135
Query: 494 LSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEI 553
L++ + + VA +++L H DL N+LL + + DFGLA+ + +
Sbjct: 136 LTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKD 192
Query: 554 SDNPSKNQTVSIGLKGSIGYIPPEHMNGQV-SILGDIYSYGILLLEMFT 601
D K + + ++ PE + +V +I D++S+G+LL E+F+
Sbjct: 193 PDXVRKGDA-----RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 92/228 (40%), Gaps = 42/228 (18%)
Query: 389 DNFSKENLIGTGSFGSV----YKGTLGDGTIVAIKVLKLQQQGALKSFIDECNALKSTRH 444
D F + +GTGSFG V +K T G A+K+L Q+ LK N
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKET---GNHYAMKILDKQKVVKLKQIEHTLN------E 84
Query: 445 RNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLN--- 501
+ IL+ + V LE F F N NL + P F L I R
Sbjct: 85 KRILQAVNFPFLVKLE--------FSFKDNSNLYMVMEYVPGGE-MFSHLRRIGRFXEPH 135
Query: 502 ---IAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPS 558
A + +YLH + + DLKP N+L+D+ V DFG AK
Sbjct: 136 ARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK---------- 182
Query: 559 KNQTVSIGLKGSIGYIPPE-HMNGQVSILGDIYSYGILLLEMFTGKRP 605
+ + + L G+ Y+ PE ++ + D ++ G+L+ EM G P
Sbjct: 183 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 230
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 105/235 (44%), Gaps = 42/235 (17%)
Query: 390 NFSKENL-----IGTGSFGSVYKGT---LG--DGTI-VAIKVLKLQQQGALKSFIDECNA 438
F + NL +G G+FG V + T LG D + VA+K+LK DE A
Sbjct: 42 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHA------DEKEA 95
Query: 439 LKST--------RHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLH---PSPAE 487
L S +H NI+ ++ AC+ G ++ E+ G+L +L + +
Sbjct: 96 LMSELKIMSHLGQHENIVNLLGACT----HGGPV-LVITEYCCYGDLLNFLRRKAEADLD 150
Query: 488 HYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLA 547
+ L + L+ + VA + +L H D+ NVLL A +GDFGLA
Sbjct: 151 KEDGRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLA 207
Query: 548 KFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNGQV-SILGDIYSYGILLLEMFT 601
+ + S N V + + ++ PE + V ++ D++SYGILL E+F+
Sbjct: 208 RDIMNDS-----NYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 106/259 (40%), Gaps = 47/259 (18%)
Query: 397 IGTGSFGSVYKGTLGDGTIVAIKVLKLQQQG--ALKSFIDECNAL-KSTRHRN-ILRVIT 452
IG+G V++ I AIK + L++ L S+ +E L K +H + I+R+
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRL-- 121
Query: 453 ACSSVDLEGNDFKALVFEFMSNGNLD--QWLHPSPAEHYQFKKLSVIQRLNIAIDVASAL 510
D E D ++ M GN+D WL K + +R + ++ A+
Sbjct: 122 ----YDYEITD--QYIYMVMECGNIDLNSWLKKK-------KSIDPWERKSYWKNMLEAV 168
Query: 511 DYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGS 570
+H H I H DLKP+N L+ M + DFG+A + P V G+
Sbjct: 169 HTIHQHG---IVHSDLKPANFLIVDGMLKLI-DFGIANQM-----QPDTTSVVKDSQVGA 219
Query: 571 IGYIPPEHMNGQVS------------ILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHM 618
+ Y+PPE + S D++S G +L M GK P + +H
Sbjct: 220 VNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHA 279
Query: 619 FVSMALPDHVMDILDPSMP 637
+ P+H ++ P +P
Sbjct: 280 IID---PNHEIEF--PDIP 293
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 91/225 (40%), Gaps = 36/225 (16%)
Query: 389 DNFSKENLIGTGSFGSVY-KGTLGDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNI 447
D F + +GTGSFG V + G A+K+L Q+ LK N + I
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN------EKRI 94
Query: 448 LRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLN------ 501
L+ + V LE F F N NL + P F L I R +
Sbjct: 95 LQAVNFPFLVKLE--------FSFKDNSNLYMVMEYVPGGE-MFSHLRRIGRFSEPHARF 145
Query: 502 IAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQ 561
A + +YLH + + DLKP N+L+D+ V DFG AK + +
Sbjct: 146 YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----------RVK 192
Query: 562 TVSIGLKGSIGYIPPE-HMNGQVSILGDIYSYGILLLEMFTGKRP 605
+ L G+ Y+ PE ++ + D ++ G+L+ EM G P
Sbjct: 193 GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 95/223 (42%), Gaps = 26/223 (11%)
Query: 389 DNFSKENLIGTGSFGSVYKGT-LGDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNI 447
D++ +GTG+FG V++ T G A K + + ++ E + RH +
Sbjct: 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 216
Query: 448 LRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVA 507
+ + A E ++ +++EFMS G L EH K+S + + V
Sbjct: 217 VNLHDA-----FEDDNEMVMIYEFMSGGEL---FEKVADEH---NKMSEDEAVEYMRQVC 265
Query: 508 SALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVG--DFGLAKFLFEISDNPSKNQTVSI 565
L ++H + H DLKP N++ + + DFGL L +P ++ V+
Sbjct: 266 KGLCHMH---ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHL-----DPKQSVKVTT 317
Query: 566 GLKGSIGYIPPEHMNGQ-VSILGDIYSYGILLLEMFTGKRPTG 607
G+ + PE G+ V D++S G+L + +G P G
Sbjct: 318 ---GTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFG 357
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 99/229 (43%), Gaps = 42/229 (18%)
Query: 397 IGTGSFGSVYKG------TLGDGTIVAIKVLKLQQQGALKSFIDECNALKST-------- 442
+G G+FG V + VA+K+LK +GA S E AL S
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLK---EGATHS---EHRALMSELKILIHIG 88
Query: 443 RHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKK--------- 493
H N++ ++ AC+ G +V EF GNL +L E +K
Sbjct: 89 HHLNVVNLLGACTK---PGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF 144
Query: 494 LSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEI 553
L++ + + VA +++L H DL N+LL + + DFGLA+ + +
Sbjct: 145 LTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKD 201
Query: 554 SDNPSKNQTVSIGLKGSIGYIPPEHMNGQV-SILGDIYSYGILLLEMFT 601
D K + + ++ PE + +V +I D++S+G+LL E+F+
Sbjct: 202 PDXVRKGDA-----RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 102/233 (43%), Gaps = 37/233 (15%)
Query: 389 DNFSKENLIGTGSFGSVYKGTLGDGTI--VAIKVLKLQQQGALKSFIDECNALKST--RH 444
+N+ + ++G G SV + + T A+K++ + G+ + +E L+ +
Sbjct: 17 ENYEPKEILGRG-VSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSA--EEVQELREATLKE 73
Query: 445 RNILRVITACSSV-----DLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQR 499
+ILR ++ ++ E N F LVF+ M G L +L E + +
Sbjct: 74 VDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL----TEKVTLSEKETRKI 129
Query: 500 LNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSK 559
+ ++V AL L+ I H DLKP N+LLD DM + DFG + L D K
Sbjct: 130 MRALLEVICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGFSCQL----DPGEK 179
Query: 560 NQTVSIGLKGSIGYIPPE----HMNGQVSILG---DIYSYGILLLEMFTGKRP 605
++V G+ Y+ PE MN G D++S G+++ + G P
Sbjct: 180 LRSVC----GTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 228
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 100/223 (44%), Gaps = 28/223 (12%)
Query: 395 NLIGTGSFGSVYKG-TLGDGTIVAIKVLKLQQQGALKSFIDECNALKSTR-HRNILRVIT 452
L+G G++ V +L +G A+K+++ Q + E L + ++NIL +I
Sbjct: 19 ELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELIE 78
Query: 453 ACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDY 512
E + LVFE + G++ H +H+ ++ S + R DVA+ALD+
Sbjct: 79 F-----FEDDTRFYLVFEKLQGGSI--LAHIQKQKHFNEREASRVVR-----DVAAALDF 126
Query: 513 LHHHCDTPIAHCDLKPSNVLL---DKDMTAHVGDFGLAKFL-FEISDNPSKNQTVSIGLK 568
LH IAH DLKP N+L +K + DF L + S P ++
Sbjct: 127 LH---TKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPC- 182
Query: 569 GSIGYIPPEHMN---GQVSILG---DIYSYGILLLEMFTGKRP 605
GS Y+ PE + Q + D++S G++L M +G P
Sbjct: 183 GSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPP 225
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 90/225 (40%), Gaps = 36/225 (16%)
Query: 389 DNFSKENLIGTGSFGSVY-KGTLGDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNI 447
D F + +GTGSFG V + G A+K+L Q+ LK N + I
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN------EKRI 95
Query: 448 LRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLN------ 501
L+ + V LE F F N NL + P F L I R
Sbjct: 96 LQAVNFPFLVKLE--------FSFKDNSNLYMVMEYVPGGE-MFSHLRRIGRFXEPHARF 146
Query: 502 IAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQ 561
A + +YLH + + DLKP N+L+D+ V DFG AK + +
Sbjct: 147 YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----------RVK 193
Query: 562 TVSIGLKGSIGYIPPE-HMNGQVSILGDIYSYGILLLEMFTGKRP 605
+ L G+ Y+ PE ++ + D ++ G+L+ EM G P
Sbjct: 194 GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 112/240 (46%), Gaps = 37/240 (15%)
Query: 387 STDNFS---------KENLIGTGSFGSVYKG-TLGDGTIVAIKVLKLQQQGALKSFI-DE 435
STD+FS +E+++G G+ V L A+K+++ +Q G ++S + E
Sbjct: 2 STDSFSGRFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIE-KQPGHIRSRVFRE 60
Query: 436 CNALKSTR-HRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKL 494
L + HRN+L +I E D LVFE M G++ +H H+ +
Sbjct: 61 VEMLYQCQGHRNVLELIEF-----FEEEDRFYLVFEKMRGGSILSHIHKR--RHFNELEA 113
Query: 495 SVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLD---KDMTAHVGDFGLAKFLF 551
SV+ + DVASALD+LH + IAH DLKP N+L + + + DFGL +
Sbjct: 114 SVVVQ-----DVASALDFLH---NKGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIK 165
Query: 552 EISDNPSKNQTVSIGLKGSIGYIPPEHMNG---QVSILG---DIYSYGILLLEMFTGKRP 605
D + + GS Y+ PE + + SI D++S G++L + +G P
Sbjct: 166 LNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPP 225
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 106/259 (40%), Gaps = 47/259 (18%)
Query: 397 IGTGSFGSVYKGTLGDGTIVAIKVLKLQQQG--ALKSFIDECNAL-KSTRHRN-ILRVIT 452
IG+G V++ I AIK + L++ L S+ +E L K +H + I+R+
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRL-- 121
Query: 453 ACSSVDLEGNDFKALVFEFMSNGNLD--QWLHPSPAEHYQFKKLSVIQRLNIAIDVASAL 510
D E D ++ M GN+D WL K + +R + ++ A+
Sbjct: 122 ----YDYEITD--QYIYMVMECGNIDLNSWLKKK-------KSIDPWERKSYWKNMLEAV 168
Query: 511 DYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGS 570
+H H I H DLKP+N L+ M + DFG+A + P V G+
Sbjct: 169 HTIHQHG---IVHSDLKPANFLIVDGMLKLI-DFGIANQM-----QPDTTSVVKDSQVGT 219
Query: 571 IGYIPPEHMNGQVS------------ILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHM 618
+ Y+PPE + S D++S G +L M GK P + +H
Sbjct: 220 VNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHA 279
Query: 619 FVSMALPDHVMDILDPSMP 637
+ P+H ++ P +P
Sbjct: 280 IID---PNHEIEF--PDIP 293
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 90/225 (40%), Gaps = 36/225 (16%)
Query: 389 DNFSKENLIGTGSFGSVY-KGTLGDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNI 447
D F + +GTGSFG V + G A+K+L Q+ LK N + I
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN------EKRI 94
Query: 448 LRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLN------ 501
L+ + V LE F F N NL + P F L I R
Sbjct: 95 LQAVNFPFLVKLE--------FSFKDNSNLYMVMEYVPGGE-MFSHLRRIGRFXEPHARF 145
Query: 502 IAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQ 561
A + +YLH + + DLKP N+L+D+ V DFG AK + +
Sbjct: 146 YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----------RVK 192
Query: 562 TVSIGLKGSIGYIPPE-HMNGQVSILGDIYSYGILLLEMFTGKRP 605
+ L G+ Y+ PE ++ + D ++ G+L+ EM G P
Sbjct: 193 GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 90/225 (40%), Gaps = 36/225 (16%)
Query: 389 DNFSKENLIGTGSFGSVY-KGTLGDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNI 447
D F + +GTGSFG V + G A+K+L Q+ LK N + I
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN------EKRI 94
Query: 448 LRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLN------ 501
L+ + V LE F F N NL + P F L I R
Sbjct: 95 LQAVNFPFLVKLE--------FSFKDNSNLYMVMEYVPGGE-MFSHLRRIGRFXEPHARF 145
Query: 502 IAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQ 561
A + +YLH + + DLKP N+L+D+ V DFG AK + +
Sbjct: 146 YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----------RVK 192
Query: 562 TVSIGLKGSIGYIPPE-HMNGQVSILGDIYSYGILLLEMFTGKRP 605
+ L G+ Y+ PE ++ + D ++ G+L+ EM G P
Sbjct: 193 GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 91/225 (40%), Gaps = 36/225 (16%)
Query: 389 DNFSKENLIGTGSFGSVY-KGTLGDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNI 447
D F + +GTGSFG V + G A+K+L Q+ LK N + I
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN------EKRI 94
Query: 448 LRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLN------ 501
L+ + V LE F F N NL + +P F L I R
Sbjct: 95 LQAVNFPFLVKLE--------FSFKDNSNLYMVMEYAPGGE-MFSHLRRIGRFXEPHARF 145
Query: 502 IAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQ 561
A + +YLH + + DLKP N+++D+ V DFG AK + +
Sbjct: 146 YAAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK----------RVK 192
Query: 562 TVSIGLKGSIGYIPPE-HMNGQVSILGDIYSYGILLLEMFTGKRP 605
+ L G+ Y+ PE ++ + D ++ G+L+ EM G P
Sbjct: 193 GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 95/223 (42%), Gaps = 26/223 (11%)
Query: 389 DNFSKENLIGTGSFGSVYKGT-LGDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNI 447
D++ +GTG+FG V++ T G A K + + ++ E + RH +
Sbjct: 51 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 110
Query: 448 LRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVA 507
+ + A E ++ +++EFMS G L EH K+S + + V
Sbjct: 111 VNLHDA-----FEDDNEMVMIYEFMSGGEL---FEKVADEH---NKMSEDEAVEYMRQVC 159
Query: 508 SALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVG--DFGLAKFLFEISDNPSKNQTVSI 565
L ++H + H DLKP N++ + + DFGL L +P ++ V+
Sbjct: 160 KGLCHMH---ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHL-----DPKQSVKVTT 211
Query: 566 GLKGSIGYIPPEHMNGQ-VSILGDIYSYGILLLEMFTGKRPTG 607
G+ + PE G+ V D++S G+L + +G P G
Sbjct: 212 ---GTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFG 251
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 114/248 (45%), Gaps = 31/248 (12%)
Query: 369 TIPKEVRQSGMSYSDISKSTDNFSKENLIGTGSFGSVY---KGTLGD-GTIVAIKVLK-- 422
T+ E+R + ++ +NF ++GTG++G V+ K + D G + A+KVLK
Sbjct: 34 TVKHELRTANLTGHAEKVGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKA 93
Query: 423 --LQQQGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQW 480
+Q+ + E L+ R L + + + + L+ ++++ G L +
Sbjct: 94 TIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLH----LILDYINGGEL--F 147
Query: 481 LHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAH 540
H S E + ++ + ++ AL++LH I + D+K N+LLD +
Sbjct: 148 THLSQRERFTEHEVQIY-----VGEIVLALEHLH---KLGIIYRDIKLENILLDSNGHVV 199
Query: 541 VGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNGQVS---ILGDIYSYGILLL 597
+ DFGL+K ++D + + G+I Y+ P+ + G S D +S G+L+
Sbjct: 200 LTDFGLSKEF--VADETER----AYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMY 253
Query: 598 EMFTGKRP 605
E+ TG P
Sbjct: 254 ELLTGASP 261
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 103/251 (41%), Gaps = 52/251 (20%)
Query: 389 DNFSKENLIGTGSFGSVYKG-TLGDGTIVAIKVLK------------------------- 422
+ ++ ++ IG GS+G V D T A+KVL
Sbjct: 13 NQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGG 72
Query: 423 -LQQQGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWL 481
+Q +G ++ E LK H N+++++ +D D +VFE ++ G +
Sbjct: 73 CIQPRGPIEQVYQEIAILKKLDHPNVVKLVEV---LDDPNEDHLYMVFELVNQGPV---- 125
Query: 482 HPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHV 541
E K LS Q D+ ++YLH+ I H D+KPSN+L+ +D +
Sbjct: 126 ----MEVPTLKPLSEDQARFYFQDLIKGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKI 178
Query: 542 GDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNGQVSILG----DIYSYGILLL 597
DFG++ F+ SD N G+ ++ PE ++ I D+++ G+ L
Sbjct: 179 ADFGVSN-EFKGSDALLSNTV------GTPAFMAPESLSETRKIFSGKALDVWAMGVTLY 231
Query: 598 EMFTGKRPTGD 608
G+ P D
Sbjct: 232 CFVFGQCPFMD 242
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 100/229 (43%), Gaps = 31/229 (13%)
Query: 388 TDNFSKENLIGTGSFGSVYKGT-LGDGTIVAIKVLKLQQQGAL--KSFIDECNALKSTRH 444
TD + IG G+F V + L G A K++ ++ A + E + +H
Sbjct: 3 TDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 445 RNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLS-VIQRLNIA 503
NI+R+ S+ EG F LVF+ ++ G L + + E+Y S IQ++ A
Sbjct: 63 SNIVRLH---DSISEEG--FHYLVFDLVTGGELFEDI--VAREYYSEADASHCIQQILEA 115
Query: 504 IDVASALDYLHHHCDTPIAHCDLKPSNVLLD---KDMTAHVGDFGLAKFLFEISDNPSKN 560
+ LH H + H DLKP N+LL K + DFGLA E+ +
Sbjct: 116 V--------LHCH-QMGVVHRDLKPENLLLASKCKGAAVKLADFGLA---IEVQG----D 159
Query: 561 QTVSIGLKGSIGYIPPEHMNGQV-SILGDIYSYGILLLEMFTGKRPTGD 608
Q G G+ GY+ PE + + DI++ G++L + G P D
Sbjct: 160 QQAWFGFAGTPGYLSPEVLRKEAYGKPVDIWACGVILYILLVGYPPFWD 208
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 99/223 (44%), Gaps = 33/223 (14%)
Query: 395 NLIGTGSFGSVYKGTLGDGTIVAIKVLKLQQQGALKSFIDECNA------LKSTRHRNIL 448
+L+G GS+G V K L T+ V L+++ + E N L+ RH+N++
Sbjct: 11 DLLGEGSYGKV-KEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVI 69
Query: 449 RVITACSSVDLEGNDFKA---LVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAID 505
++ VD+ N+ K +V E+ G + + L P K+ V Q
Sbjct: 70 QL------VDVLYNEEKQKMYMVMEYCVCG-MQEMLDSVPE-----KRFPVCQAHGYFCQ 117
Query: 506 VASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSI 565
+ L+YLH I H D+KP N+LL T + G+A+ L + + + +
Sbjct: 118 LIDGLEYLHSQG---IVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTS--- 171
Query: 566 GLKGSIGYIPPEHMNGQVSILG---DIYSYGILLLEMFTGKRP 605
+GS + PPE NG + G DI+S G+ L + TG P
Sbjct: 172 --QGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYP 212
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 102/240 (42%), Gaps = 33/240 (13%)
Query: 374 VRQSGMSYSDISKSTDNFSKENL----IGTGSFGSVYKGT-LGDGTIVAIKVLK--LQQQ 426
+R+ G D++K+ K + +G+G++GSV G VAIK L Q +
Sbjct: 23 IRKKGFYKQDVNKTAWELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSE 82
Query: 427 GALKSFIDECNALKSTRHRNI---LRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHP 483
K E LK +H N+ L V T SS+ DF LV FM +L + +
Sbjct: 83 IFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLR-NFYDF-YLVMPFMQT-DLQKIMGM 139
Query: 484 SPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGD 543
+E IQ L + L Y+H + H DLKP N+ +++D + D
Sbjct: 140 EFSE-------EKIQYL--VYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILD 187
Query: 544 FGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNGQVSILGDIYSYGILLLEMFTGK 603
FGLA+ +D V+ + + H N V DI+S G ++ EM TGK
Sbjct: 188 FGLARH----ADAEMTGYVVTRWYRAPEVILSWMHYNQTV----DIWSVGCIMAEMLTGK 239
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 101/233 (43%), Gaps = 37/233 (15%)
Query: 389 DNFSKENLIGTGSFGSVYKGTLGDGTI--VAIKVLKLQQQGALKSFIDECNALKST--RH 444
+N+ + ++G G SV + + T A+K++ + G+ + +E L+ +
Sbjct: 4 ENYEPKEILGRG-VSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSA--EEVQELREATLKE 60
Query: 445 RNILRVITACSSV-----DLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQR 499
+ILR ++ ++ E N F LVF+ M G L +L E + +
Sbjct: 61 VDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL----TEKVTLSEKETRKI 116
Query: 500 LNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSK 559
+ ++V AL L+ I H DLKP N+LLD DM + DFG + L D K
Sbjct: 117 MRALLEVICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGFSCQL----DPGEK 166
Query: 560 NQTVSIGLKGSIGYIPPE----HMNGQVSILG---DIYSYGILLLEMFTGKRP 605
+ V G+ Y+ PE MN G D++S G+++ + G P
Sbjct: 167 LREVC----GTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 215
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 93/228 (40%), Gaps = 42/228 (18%)
Query: 389 DNFSKENLIGTGSFGSV----YKGTLGDGTIVAIKVLKLQQQGALKSFIDECNALKSTRH 444
D F + +GTGSFG V +K T G A+K+L Q+ LK N
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKET---GNHFAMKILDKQKVVKLKQIEHTLN------E 91
Query: 445 RNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLN--- 501
+ IL+ + V LE + F N NL + P F L I R +
Sbjct: 92 KRILQAVNFPFLVKLE--------YSFKDNSNLYMVMEYVPGGE-MFSHLRRIGRFSEPH 142
Query: 502 ---IAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPS 558
A + +YLH + + DLKP N+L+D+ V DFG AK
Sbjct: 143 ARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK---------- 189
Query: 559 KNQTVSIGLKGSIGYIPPE-HMNGQVSILGDIYSYGILLLEMFTGKRP 605
+ + + L G+ Y+ PE ++ + D ++ G+L+ EM G P
Sbjct: 190 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 93/228 (40%), Gaps = 42/228 (18%)
Query: 389 DNFSKENLIGTGSFGSV----YKGTLGDGTIVAIKVLKLQQQGALKSFIDECNALKSTRH 444
D F + +GTGSFG V +K T G A+K+L Q+ LK N
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKET---GNHFAMKILDKQKVVKLKQIEHTLN------E 91
Query: 445 RNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLN--- 501
+ IL+ + V LE + F N NL + P F L I R +
Sbjct: 92 KRILQAVNFPFLVKLE--------YSFKDNSNLYMVMEYVPGGE-MFSHLRRIGRFSEPH 142
Query: 502 ---IAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPS 558
A + +YLH + + DLKP N+L+D+ V DFG AK
Sbjct: 143 ARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK---------- 189
Query: 559 KNQTVSIGLKGSIGYIPPE-HMNGQVSILGDIYSYGILLLEMFTGKRP 605
+ + + L G+ Y+ PE ++ + D ++ G+L+ EM G P
Sbjct: 190 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 101/233 (43%), Gaps = 37/233 (15%)
Query: 389 DNFSKENLIGTGSFGSVYKGTLGDGTI--VAIKVLKLQQQGALKSFIDECNALKST--RH 444
+N+ + ++G G SV + + T A+K++ + G+ + +E L+ +
Sbjct: 17 ENYEPKEILGRG-VSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSA--EEVQELREATLKE 73
Query: 445 RNILRVITACSSV-----DLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQR 499
+ILR ++ ++ E N F LVF+ M G L +L E + +
Sbjct: 74 VDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL----TEKVTLSEKETRKI 129
Query: 500 LNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSK 559
+ ++V AL L+ I H DLKP N+LLD DM + DFG + L D K
Sbjct: 130 MRALLEVICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGFSCQL----DPGEK 179
Query: 560 NQTVSIGLKGSIGYIPPE----HMNGQVSILG---DIYSYGILLLEMFTGKRP 605
+ V G+ Y+ PE MN G D++S G+++ + G P
Sbjct: 180 LREVC----GTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 228
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 102/240 (42%), Gaps = 33/240 (13%)
Query: 374 VRQSGMSYSDISKSTDNFSKENL----IGTGSFGSVYKGT-LGDGTIVAIKVLK--LQQQ 426
+R+ G D++K+ K + +G+G++GSV G VAIK L Q +
Sbjct: 5 IRKKGFYKQDVNKTAWELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSE 64
Query: 427 GALKSFIDECNALKSTRHRNI---LRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHP 483
K E LK +H N+ L V T SS+ DF LV FM +L + +
Sbjct: 65 IFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLR-NFYDF-YLVMPFMQT-DLQKIMGL 121
Query: 484 SPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGD 543
+E IQ L + L Y+H + H DLKP N+ +++D + D
Sbjct: 122 KFSE-------EKIQYL--VYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILD 169
Query: 544 FGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNGQVSILGDIYSYGILLLEMFTGK 603
FGLA+ +D V+ + + H N V DI+S G ++ EM TGK
Sbjct: 170 FGLARH----ADAEMTGYVVTRWYRAPEVILSWMHYNQTV----DIWSVGCIMAEMLTGK 221
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 93/228 (40%), Gaps = 42/228 (18%)
Query: 389 DNFSKENLIGTGSFGSV----YKGTLGDGTIVAIKVLKLQQQGALKSFIDECNALKSTRH 444
D F + +GTGSFG V +K T G A+K+L Q+ LK N
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKET---GNHFAMKILDKQKVVKLKQIEHTLN------E 91
Query: 445 RNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLN--- 501
+ IL+ + V LE + F N NL + P F L I R +
Sbjct: 92 KRILQAVNFPFLVKLE--------YSFKDNSNLYMVMEYVPGGE-MFSHLRRIGRFSEPH 142
Query: 502 ---IAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPS 558
A + +YLH + + DLKP N+L+D+ V DFG AK
Sbjct: 143 ARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK---------- 189
Query: 559 KNQTVSIGLKGSIGYIPPE-HMNGQVSILGDIYSYGILLLEMFTGKRP 605
+ + + L G+ Y+ PE ++ + D ++ G+L+ EM G P
Sbjct: 190 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 101/219 (46%), Gaps = 28/219 (12%)
Query: 389 DNFSKENLIGTGSFGSV-YKGTLGDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNI 447
D++ K IG GS G V G VA+K++ L++Q + +E ++ +H N+
Sbjct: 48 DSYVK---IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNV 104
Query: 448 LRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVA 507
+ + + L G + L+ EF+ G L + +L+ Q + V
Sbjct: 105 VEMYKSY----LVGEELWVLM-EFLQGGALTDIVSQV--------RLNEEQIATVCEAVL 151
Query: 508 SALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGL 567
AL YLH + H D+K ++LL D + DFG F +IS + K + L
Sbjct: 152 QALAYLHAQG---VIHRDIKSDSILLTLDGRVKLSDFG---FCAQISKDVPKRKX----L 201
Query: 568 KGSIGYIPPEHMNGQV-SILGDIYSYGILLLEMFTGKRP 605
G+ ++ PE ++ + + DI+S GI+++EM G+ P
Sbjct: 202 VGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPP 240
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 110/248 (44%), Gaps = 41/248 (16%)
Query: 368 GTIPKEVRQSGMSYSDISKSTDNFSKENLIGTGSFGSVYKGTL----GDGTIVAIKVLKL 423
G +P+ Q G++ D+ + ++G G FG VY+G G+ VA+K K
Sbjct: 10 GLVPRGSPQYGIAREDVVLN-------RILGEGFFGEVYEGVYTNHKGEKINVAVKTCK- 61
Query: 424 QQQGAL---KSFIDECNALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQW 480
+ L + F+ E +K+ H +I+++I + ++ E G L +
Sbjct: 62 -KDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIE------EEPTWIIMELYPYGELGHY 114
Query: 481 LHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHH-HCDTPIAHCDLKPSNVLLDKDMTA 539
L + L V+ + ++ + A+ YL +C H D+ N+L+
Sbjct: 115 LERNK------NSLKVLTLVLYSLQICKAMAYLESINC----VHRDIAVRNILVASPECV 164
Query: 540 HVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMN-GQVSILGDIYSYGILLLE 598
+GDFGL+++ I D +V+ + I ++ PE +N + + D++ + + + E
Sbjct: 165 KLGDFGLSRY---IEDEDYYKASVT---RLPIKWMSPESINFRRFTTASDVWMFAVCMWE 218
Query: 599 MFT-GKRP 605
+ + GK+P
Sbjct: 219 ILSFGKQP 226
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 98/215 (45%), Gaps = 31/215 (14%)
Query: 397 IGTGSFGSVYK--GTLGDGTIVAIKVLKLQ--QQGALKSFIDECNALKSTRHRNILRVIT 452
+G G FG V++ T T +A K +K++ Q +K E + L RHRNIL +
Sbjct: 13 LGRGEFGIVHRCVETSSKKTYMA-KFVKVKGTDQVLVKK---EISILNIARHRNILHLHE 68
Query: 453 ACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDY 512
+ E + ++FEF+S ++ + ++ S E + + +S + + V AL +
Sbjct: 69 S-----FESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQ------VCEALQF 117
Query: 513 LHHHCDTPIAHCDLKPSNVLLD--KDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGS 570
LH H I H D++P N++ + T + +FG A+ L P N +
Sbjct: 118 LHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQL-----KPGDN--FRLLFTAP 167
Query: 571 IGYIPPEHMNGQVSILGDIYSYGILLLEMFTGKRP 605
Y P H + VS D++S G L+ + +G P
Sbjct: 168 EYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINP 202
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 97/224 (43%), Gaps = 26/224 (11%)
Query: 387 STDNFSKENLIGTGSFGSVYKGTL-GDGTIVAIKVLKLQQQGALKS---FIDECNALKST 442
+ + F + ++G G FG V + G + A K L+ ++ K ++E L+
Sbjct: 182 TKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKV 241
Query: 443 RHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNI 502
R ++ + A E D LV M+ G+L ++ H + +
Sbjct: 242 NSRFVVSLAYA-----YETKDALCLVLTLMNGGDLKFHIY-----HMGQAGFPEARAVFY 291
Query: 503 AIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQT 562
A ++ L+ LH I + DLKP N+LLD + D GLA + E QT
Sbjct: 292 AAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPE-------GQT 341
Query: 563 VSIGLKGSIGYIPPEHM-NGQVSILGDIYSYGILLLEMFTGKRP 605
+ G G++GY+ PE + N + + D ++ G LL EM G+ P
Sbjct: 342 IK-GRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSP 384
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 97/224 (43%), Gaps = 26/224 (11%)
Query: 387 STDNFSKENLIGTGSFGSVYKGTL-GDGTIVAIKVLKLQQQGALKS---FIDECNALKST 442
+ + F + ++G G FG V + G + A K L+ ++ K ++E L+
Sbjct: 182 TKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKV 241
Query: 443 RHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNI 502
R ++ + A E D LV M+ G+L ++ H + +
Sbjct: 242 NSRFVVSLAYA-----YETKDALCLVLTLMNGGDLKFHIY-----HMGQAGFPEARAVFY 291
Query: 503 AIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQT 562
A ++ L+ LH I + DLKP N+LLD + D GLA + E QT
Sbjct: 292 AAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPE-------GQT 341
Query: 563 VSIGLKGSIGYIPPEHM-NGQVSILGDIYSYGILLLEMFTGKRP 605
+ G G++GY+ PE + N + + D ++ G LL EM G+ P
Sbjct: 342 IK-GRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSP 384
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 99/234 (42%), Gaps = 35/234 (14%)
Query: 385 SKSTDNFSKENLIGTGSFGSVYKGTLGDGT------IVAIKVLKLQQQGALKSFIDECNA 438
++ TD++ +G G+F V + T I+ K L + L+ C
Sbjct: 27 TRFTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRL 86
Query: 439 LKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQ 498
LK H NI+R+ S+ EG F LVF+ ++ G L + + E+Y S
Sbjct: 87 LK---HPNIVRLH---DSISEEG--FHYLVFDLVTGGELFEDI--VAREYYSEADAS--- 133
Query: 499 RLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLD---KDMTAHVGDFGLAKFLFEISD 555
+ + +++++H H I H DLKP N+LL K + DFGLA E+
Sbjct: 134 --HCIHQILESVNHIHQH---DIVHRDLKPENLLLASKCKGAAVKLADFGLA---IEVQG 185
Query: 556 NPSKNQTVSIGLKGSIGYIPPEHMNGQ-VSILGDIYSYGILLLEMFTGKRPTGD 608
Q G G+ GY+ PE + DI++ G++L + G P D
Sbjct: 186 ----EQQAWFGFAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVGYPPFWD 235
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 103/240 (42%), Gaps = 40/240 (16%)
Query: 382 SDISKSTDNFSKENLIGTGSFGSVYKGTLGD-GTIVAIKVL---KLQQQGALKSFIDECN 437
++ D+F +IG G+F V + G + A+K++ + ++G + F +E +
Sbjct: 54 KEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERD 113
Query: 438 ALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNL----DQWLHPSPAEHYQFKK 493
L + R I ++ A + ++ LV E+ G+L ++ PAE +F
Sbjct: 114 VLVNGDRRWITQLHFA-----FQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYL 168
Query: 494 LSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEI 553
++ +AID L Y+H D+KP N+LLD+ + DFG ++
Sbjct: 169 AEIV----MAIDSVHRLGYVHR---------DIKPDNILLDRCGHIRLADFGSC---LKL 212
Query: 554 SDNPSKNQTVSIGLKGSIGYIPPEHMNGQVSILG--------DIYSYGILLLEMFTGKRP 605
+ + V++ G+ Y+ PE + G D ++ G+ EMF G+ P
Sbjct: 213 RADGTVRSLVAV---GTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTP 269
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 91/225 (40%), Gaps = 36/225 (16%)
Query: 389 DNFSKENLIGTGSFGSVY-KGTLGDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNI 447
D F + +GTGSFG V + G A+K+L Q+ LK N + I
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN------EKRI 95
Query: 448 LRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLN------ 501
L+ + LE F F N NL + +P F L I R +
Sbjct: 96 LQAVNFPFLTKLE--------FSFKDNSNLYMVMEYAPGGE-MFSHLRRIGRFSEPHARF 146
Query: 502 IAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQ 561
A + +YLH + + DLKP N+++D+ V DFG AK + +
Sbjct: 147 YAAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK----------RVK 193
Query: 562 TVSIGLKGSIGYIPPE-HMNGQVSILGDIYSYGILLLEMFTGKRP 605
+ L G+ Y+ PE ++ + D ++ G+L+ EM G P
Sbjct: 194 GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 99/229 (43%), Gaps = 42/229 (18%)
Query: 397 IGTGSFGSVYKG------TLGDGTIVAIKVLKLQQQGALKSFIDECNALKST-------- 442
+G G+FG V + VA+K+LK +GA S E AL S
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLK---EGATHS---EHRALMSELKILIHIG 79
Query: 443 RHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKK--------- 493
H N++ ++ AC+ G ++ EF GNL +L E +K
Sbjct: 80 HHLNVVNLLGACTK---PGGPL-MVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF 135
Query: 494 LSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEI 553
L++ + + VA +++L H DL N+LL + + DFGLA+ + +
Sbjct: 136 LTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKD 192
Query: 554 SDNPSKNQTVSIGLKGSIGYIPPEHMNGQV-SILGDIYSYGILLLEMFT 601
D K + + ++ PE + +V +I D++S+G+LL E+F+
Sbjct: 193 PDXVRKGDA-----RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 91/225 (40%), Gaps = 36/225 (16%)
Query: 389 DNFSKENLIGTGSFGSVY-KGTLGDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNI 447
D F + +GTGSFG V + G A+K+L Q+ LK N + I
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN------EKRI 95
Query: 448 LRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLN------ 501
L+ + LE F F N NL + +P F L I R +
Sbjct: 96 LQAVNFPFLTKLE--------FSFKDNSNLYMVMEYAPGGE-MFSHLRRIGRFSEPHARF 146
Query: 502 IAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQ 561
A + +YLH + + DLKP N+++D+ V DFG AK + +
Sbjct: 147 YAAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK----------RVK 193
Query: 562 TVSIGLKGSIGYIPPE-HMNGQVSILGDIYSYGILLLEMFTGKRP 605
+ L G+ Y+ PE ++ + D ++ G+L+ EM G P
Sbjct: 194 GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 57/104 (54%), Gaps = 15/104 (14%)
Query: 501 NIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKN 560
IA+ + AL++LH + H D+KPSNVL++ + DFG++ +L + S
Sbjct: 157 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVD-----SVA 209
Query: 561 QTVSIGLKGSIGYIPPEHMNGQV-----SILGDIYSYGILLLEM 599
+T+ G K Y+ PE +N ++ S+ DI+S GI ++E+
Sbjct: 210 KTIDAGCK---PYMAPERINPELNQKGYSVKSDIWSLGITMIEL 250
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 102/241 (42%), Gaps = 27/241 (11%)
Query: 370 IPKEVRQSGMSYSDISKSTDNFSKENLIGTGSFGSVY-KGTLGDGTIVAIKVLK---LQQ 425
+P E R+ + D K TD F+ ++G GSFG V G + AIK+LK + Q
Sbjct: 1 MPSEDRKQPSNNLDRVKLTD-FNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQ 59
Query: 426 QGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSP 485
++ + E L L + +C + D V E+++ G+L +
Sbjct: 60 DDDVECTMVEKRVLALLDKPPFLTQLHSC----FQTVDRLYFVMEYVNGGDLMYHIQ--- 112
Query: 486 AEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFG 545
Q K Q + A +++ L +LH I + DLK NV+LD + + DFG
Sbjct: 113 ----QVGKFKEPQAVFYAAEISIGLFFLHKRG---IIYRDLKLDNVMLDSEGHIKIADFG 165
Query: 546 LAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNGQ-VSILGDIYSYGILLLEMFTGKR 604
+ K + + G+ YI PE + Q D ++YG+LL EM G+
Sbjct: 166 MCK-------EHMMDGVTTREFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQP 218
Query: 605 P 605
P
Sbjct: 219 P 219
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 94/220 (42%), Gaps = 34/220 (15%)
Query: 396 LIGTGSFGSVYKGT-LGDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRVITAC 454
++G G++G VY G L + +AIK + + + +E K +H+NI++ + +
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 88
Query: 455 SSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAI-----DVASA 509
S N F + E + G+L L K ++ I +
Sbjct: 89 SE-----NGFIKIFMEQVPGGSLSALLR---------SKWGPLKDNEQTIGFYTKQILEG 134
Query: 510 LDYLHHHCDTPIAHCDLKPSNVLLDK-DMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLK 568
L YLH D I H D+K NVL++ + DFG +K L I NP
Sbjct: 135 LKYLH---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGI--NPCTET-----FT 184
Query: 569 GSIGYIPPEHMNGQVSILG---DIYSYGILLLEMFTGKRP 605
G++ Y+ PE ++ G DI+S G ++EM TGK P
Sbjct: 185 GTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPP 224
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 100/219 (45%), Gaps = 28/219 (12%)
Query: 392 SKENLIGTGSFGSVYK-GTLGDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRV 450
SK ++G G FG V+K G +A K++K + + +E + + H N++++
Sbjct: 92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQL 151
Query: 451 ITACSSVDLEGNDFKALVFEFMSNGNL-DQWLHPSPAEHYQFKKLSVIQRLNIAIDVASA 509
A S ND LV E++ G L D+ + E Y +L I + +
Sbjct: 152 YDAFES----KNDI-VLVMEYVDGGELFDRIID----ESYNLTELDTILFMK---QICEG 199
Query: 510 LDYLHHHCDTPIAHCDLKPSNVL-LDKDMTA-HVGDFGLAKFLFEISDNPSKNQTVSIGL 567
+ ++H I H DLKP N+L +++D + DFGLA+ P + V+
Sbjct: 200 IRHMHQ---MYILHLDLKPENILCVNRDAKQIKIIDFGLARRY-----KPREKLKVNF-- 249
Query: 568 KGSIGYIPPEHMNGQ-VSILGDIYSYGILLLEMFTGKRP 605
G+ ++ PE +N VS D++S G++ + +G P
Sbjct: 250 -GTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSP 287
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 87/190 (45%), Gaps = 38/190 (20%)
Query: 385 SKSTDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQQGALKSFIDECNALKST- 442
S+ T F + IG+G FGSV+K DG I AIK + + L +DE NAL+
Sbjct: 3 SRYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIK----RSKKPLAGSVDEQNALREVY 58
Query: 443 ------RHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQ----FK 492
+H +++R +A + +D + E+ + G+L + +E+Y+ FK
Sbjct: 59 AHAVLGQHSHVVRYFSAWAE-----DDHMLIQNEYCNGGSLADAI----SENYRIMSYFK 109
Query: 493 KLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVG-------DFG 545
+ + ++ + V L Y+H + H D+KPSN+ + + + D+
Sbjct: 110 EAEL---KDLLLQVGRGLRYIH---SMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWA 163
Query: 546 LAKFLFEISD 555
K +F+I D
Sbjct: 164 SNKVMFKIGD 173
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 94/220 (42%), Gaps = 34/220 (15%)
Query: 396 LIGTGSFGSVYKGT-LGDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRVITAC 454
++G G++G VY G L + +AIK + + + +E K +H+NI++ + +
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 74
Query: 455 SSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAI-----DVASA 509
S N F + E + G+L L K ++ I +
Sbjct: 75 SE-----NGFIKIFMEQVPGGSLSALLR---------SKWGPLKDNEQTIGFYTKQILEG 120
Query: 510 LDYLHHHCDTPIAHCDLKPSNVLLDK-DMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLK 568
L YLH D I H D+K NVL++ + DFG +K L I NP
Sbjct: 121 LKYLH---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGI--NPCTET-----FT 170
Query: 569 GSIGYIPPEHMNGQVSILG---DIYSYGILLLEMFTGKRP 605
G++ Y+ PE ++ G DI+S G ++EM TGK P
Sbjct: 171 GTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPP 210
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 49/101 (48%), Gaps = 11/101 (10%)
Query: 506 VASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSI 565
+ S L++LH I + DLKP NVLLD D + D GLA L QT +
Sbjct: 298 IVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVEL-------KAGQTKTK 347
Query: 566 GLKGSIGYIPPEHMNGQVSILG-DIYSYGILLLEMFTGKRP 605
G G+ G++ PE + G+ D ++ G+ L EM + P
Sbjct: 348 GYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 49/101 (48%), Gaps = 11/101 (10%)
Query: 506 VASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSI 565
+ S L++LH I + DLKP NVLLD D + D GLA L QT +
Sbjct: 298 IVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVEL-------KAGQTKTK 347
Query: 566 GLKGSIGYIPPEHMNGQVSILG-DIYSYGILLLEMFTGKRP 605
G G+ G++ PE + G+ D ++ G+ L EM + P
Sbjct: 348 GYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 90/225 (40%), Gaps = 36/225 (16%)
Query: 389 DNFSKENLIGTGSFGSVY-KGTLGDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNI 447
D F + +GTGSFG V + G A+K+L Q+ LK N + I
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN------EKRI 95
Query: 448 LRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLN------ 501
L+ + LE F F N NL + +P F L I R
Sbjct: 96 LQAVNFPFLTKLE--------FSFKDNSNLYMVMEYAPGGE-MFSHLRRIGRFXEPHARF 146
Query: 502 IAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQ 561
A + +YLH + + DLKP N+++D+ V DFG AK + +
Sbjct: 147 YAAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK----------RVK 193
Query: 562 TVSIGLKGSIGYIPPE-HMNGQVSILGDIYSYGILLLEMFTGKRP 605
+ L G+ Y+ PE ++ + D ++ G+L+ EM G P
Sbjct: 194 GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 106/240 (44%), Gaps = 35/240 (14%)
Query: 378 GMSYSDISKSTDNFSKENLIGTGSFGSVYK-GTLGDGTIVAIKVLKLQQ-----QGALKS 431
GMS D++ +G+G F V K G G A K +K ++ +G +
Sbjct: 1 GMSTFRQEDVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSRE 60
Query: 432 FID-ECNALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQ 490
I+ E N L+ RH NI+ + E L+ E +S G L +L AE
Sbjct: 61 EIEREVNILREIRHPNIITLHDI-----FENKTDVVLILELVSGGELFDFL----AEKES 111
Query: 491 FKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNV-LLDKDM---TAHVGDFGL 546
+ Q L +D + YLH IAH DLKP N+ LLDK++ + DFG+
Sbjct: 112 LTEDEATQFLKQILD---GVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGI 165
Query: 547 AKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNGQ-VSILGDIYSYGILLLEMFTGKRP 605
A + + N KN + G+ ++ PE +N + + + D++S G++ + +G P
Sbjct: 166 AHKI--EAGNEFKN------IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 105/248 (42%), Gaps = 55/248 (22%)
Query: 390 NFSKENL-----IGTGSFGSVYKGT---LG--DGTI-VAIKVLKLQQQGALKSFIDECNA 438
F + NL +G G+FG V + T LG D + VA+K+LK DE A
Sbjct: 27 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHA------DEKEA 80
Query: 439 LKST--------RHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLH-------- 482
L S +H NI+ ++ AC+ G ++ E+ G+L +L
Sbjct: 81 LMSELKIMSHLGQHENIVNLLGACT----HGGPV-LVITEYCCYGDLLNFLRRKAEAMLG 135
Query: 483 --------PSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLD 534
P + + L + L+ + VA + +L H D+ NVLL
Sbjct: 136 PSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLT 192
Query: 535 KDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNGQV-SILGDIYSYG 593
A +GDFGLA+ + S N V + + ++ PE + V ++ D++SYG
Sbjct: 193 NGHVAKIGDFGLARDIMNDS-----NYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYG 247
Query: 594 ILLLEMFT 601
ILL E+F+
Sbjct: 248 ILLWEIFS 255
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 87/190 (45%), Gaps = 38/190 (20%)
Query: 385 SKSTDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQQGALKSFIDECNALKST- 442
S+ T F + IG+G FGSV+K DG I AIK + + L +DE NAL+
Sbjct: 7 SRYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIK----RSKKPLAGSVDEQNALREVY 62
Query: 443 ------RHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQ----FK 492
+H +++R +A + +D + E+ + G+L + +E+Y+ FK
Sbjct: 63 AHAVLGQHSHVVRYFSAWAE-----DDHMLIQNEYCNGGSLADAI----SENYRIMSYFK 113
Query: 493 KLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVG-------DFG 545
+ + ++ + V L Y+H + H D+KPSN+ + + + D+
Sbjct: 114 EAEL---KDLLLQVGRGLRYIH---SMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWA 167
Query: 546 LAKFLFEISD 555
K +F+I D
Sbjct: 168 SNKVMFKIGD 177
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 49/101 (48%), Gaps = 11/101 (10%)
Query: 506 VASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSI 565
+ S L++LH I + DLKP NVLLD D + D GLA L QT +
Sbjct: 298 IVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVEL-------KAGQTKTK 347
Query: 566 GLKGSIGYIPPEHMNGQVSILG-DIYSYGILLLEMFTGKRP 605
G G+ G++ PE + G+ D ++ G+ L EM + P
Sbjct: 348 GYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 49/101 (48%), Gaps = 11/101 (10%)
Query: 506 VASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSI 565
+ S L++LH I + DLKP NVLLD D + D GLA L QT +
Sbjct: 298 IVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVEL-------KAGQTKTK 347
Query: 566 GLKGSIGYIPPEHMNGQVSILG-DIYSYGILLLEMFTGKRP 605
G G+ G++ PE + G+ D ++ G+ L EM + P
Sbjct: 348 GYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 87/190 (45%), Gaps = 38/190 (20%)
Query: 385 SKSTDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQQGALKSFIDECNALKST- 442
S+ T F + IG+G FGSV+K DG I AIK + + L +DE NAL+
Sbjct: 5 SRYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIK----RSKKPLAGSVDEQNALREVY 60
Query: 443 ------RHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQ----FK 492
+H +++R +A + +D + E+ + G+L + +E+Y+ FK
Sbjct: 61 AHAVLGQHSHVVRYFSAWAE-----DDHMLIQNEYCNGGSLADAI----SENYRIMSYFK 111
Query: 493 KLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVG-------DFG 545
+ + ++ + V L Y+H + H D+KPSN+ + + + D+
Sbjct: 112 EAEL---KDLLLQVGRGLRYIH---SMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWA 165
Query: 546 LAKFLFEISD 555
K +F+I D
Sbjct: 166 SNKVMFKIGD 175
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 96/225 (42%), Gaps = 37/225 (16%)
Query: 397 IGTGSFGSVYKGTL---GDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHR----NILR 449
+G G+FGSV +G VAIKVLK QG K+ +E H+ I+R
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLK---QGTEKADTEEMMREAQIMHQLDNPYIVR 400
Query: 450 VITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAI---DV 506
+I C + L LV E G L ++L K I N+A V
Sbjct: 401 LIGVCQAEAL------MLVMEMAGGGPLHKFL---------VGKREEIPVSNVAELLHQV 445
Query: 507 ASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIG 566
+ + YL + H +L NVLL A + DFGL+K L + S S G
Sbjct: 446 SMGMKYLE---EKNFVHRNLAARNVLLVNRHYAKISDFGLSKAL---GADDSYYTARSAG 499
Query: 567 LKGSIGYIPPEHMN-GQVSILGDIYSYGILLLEMFT-GKRPTGDM 609
K + + PE +N + S D++SYG+ + E + G++P M
Sbjct: 500 -KWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKM 543
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 104/246 (42%), Gaps = 35/246 (14%)
Query: 374 VRQSGMSYSDISKSTDNFSK----ENLIGTGSFGSVY-KGTLGDGTIVAIKVL-KLQQQG 427
R++G S S K ++ K + +GTG+F V G + A+K + K +G
Sbjct: 3 ARENGESSSSWKKQAEDIKKIFEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKG 62
Query: 428 ALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNL-DQWLHPSPA 486
S +E L+ +H NI+ A + E + LV + +S G L D+ +
Sbjct: 63 KESSIENEIAVLRKIKHENIV----ALEDI-YESPNHLYLVMQLVSGGELFDRIVEKG-- 115
Query: 487 EHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLL---DKDMTAHVGD 543
Y K S + R V A+ YLH I H DLKP N+L D++ + D
Sbjct: 116 -FYTEKDASTLIR-----QVLDAVYYLHR---MGIVHRDLKPENLLYYSQDEESKIMISD 166
Query: 544 FGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNGQ-VSILGDIYSYGILLLEMFTG 602
FGL+K K +S G+ GY+ PE + + S D +S G++ + G
Sbjct: 167 FGLSKM-------EGKGDVMSTAC-GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 218
Query: 603 KRPTGD 608
P D
Sbjct: 219 YPPFYD 224
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 87/190 (45%), Gaps = 38/190 (20%)
Query: 385 SKSTDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQQGALKSFIDECNALKST- 442
S+ T F + IG+G FGSV+K DG I AIK + + L +DE NAL+
Sbjct: 5 SRYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIK----RSKKPLAGSVDEQNALREVY 60
Query: 443 ------RHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQ----FK 492
+H +++R +A + +D + E+ + G+L + +E+Y+ FK
Sbjct: 61 AHAVLGQHSHVVRYFSAWAE-----DDHMLIQNEYCNGGSLADAI----SENYRIMSYFK 111
Query: 493 KLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVG-------DFG 545
+ + ++ + V L Y+H + H D+KPSN+ + + + D+
Sbjct: 112 EAEL---KDLLLQVGRGLRYIH---SMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWA 165
Query: 546 LAKFLFEISD 555
K +F+I D
Sbjct: 166 SNKVMFKIGD 175
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 93/228 (40%), Gaps = 28/228 (12%)
Query: 384 ISKSTDNFSKENLIGTGSFGSVYKGTLGD-GTIVAIKVLKLQQQGALKSFIDECNALK-- 440
I ++F ++G GSFG V+ AIK LK + L EC ++
Sbjct: 13 IKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALK--KDVVLMDDDVECTMVEKR 70
Query: 441 --STRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQ 498
S + C+ E F V E+++ G+L H + + +
Sbjct: 71 VLSLAWEHPFLTHMFCTFQTKENLFF---VMEYLNGGDL--MYHIQSCHKFDLSRATFY- 124
Query: 499 RLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPS 558
A ++ L +LH I + DLK N+LLDKD + DFG+ K E +
Sbjct: 125 ----AAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCK---ENMLGDA 174
Query: 559 KNQTVSIGLKGSIGYIPPEHMNGQ-VSILGDIYSYGILLLEMFTGKRP 605
K G+ YI PE + GQ + D +S+G+LL EM G+ P
Sbjct: 175 KTNEFC----GTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSP 218
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 77/181 (42%), Gaps = 21/181 (11%)
Query: 369 TIPKEVRQSGMSYSDISKSTDNFSKENLIGTGSFGSVYKGTL-GDGTIVAIKVLKLQQ-- 425
+ P++ Q+ + + + LIG G FG VY G G+ VAI+++ +++
Sbjct: 13 SFPRKASQTSIFLQEWDIPFEQLEIGELIGKGRFGQVYHGRWHGE---VAIRLIDIERDN 69
Query: 426 QGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSP 485
+ LK+F E A + TRH N++ + AC S A++ L + +
Sbjct: 70 EDQLKAFKREVMAYRQTRHENVVLFMGACMS-----PPHLAIITSLCKGRTLYSVVRDAK 124
Query: 486 AEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFG 545
L V + IA ++ + YLH I H DLK NV D + DFG
Sbjct: 125 I------VLDVNKTRQIAQEIVKGMGYLH---AKGILHKDLKSKNVFYDNGKVV-ITDFG 174
Query: 546 L 546
L
Sbjct: 175 L 175
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 105/242 (43%), Gaps = 38/242 (15%)
Query: 374 VRQSGMSYSDISKSTDNFSKENLIGTGSFGSVYKGTLGD-GTIVAIKVLKLQQQGALKSF 432
R+SG + S S +F +IG GS+ V L I A+KV+K + L +
Sbjct: 7 TRESGKASS--SLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKE----LVND 60
Query: 433 IDECNALKSTRH-----RNILRVITACSSVDLEGNDFKALVFEFMSNGNLD---QWLHPS 484
++ + +++ +H N ++ S E F V E+++ G+L Q
Sbjct: 61 DEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLF--FVIEYVNGGDLMFHMQRQRKL 118
Query: 485 PAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDF 544
P EH +F + +++ AL+YLH I + DLK NVLLD + + D+
Sbjct: 119 PEEHARF----------YSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDY 165
Query: 545 GLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNGQ-VSILGDIYSYGILLLEMFTGK 603
G+ K D S G+ YI PE + G+ D ++ G+L+ EM G+
Sbjct: 166 GMCKEGLRPGDTTSX-------FCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGR 218
Query: 604 RP 605
P
Sbjct: 219 SP 220
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 92/217 (42%), Gaps = 36/217 (16%)
Query: 397 IGTGSFGSVYKGTLGD-GTIVAIKVLKLQQQGAL--KSFIDECNALKSTRHRNI---LRV 450
+G+G++G+V G G VAIK L Q L K E LK RH N+ L V
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDV 92
Query: 451 ITACSSVDLEGNDFKALVFEFMSN--GNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVAS 508
T ++D + DF LV FM G L + +KL + + +
Sbjct: 93 FTPDETLD-DFTDF-YLVMPFMGTDLGKL-----------MKHEKLGEDRIQFLVYQMLK 139
Query: 509 ALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLK 568
L Y+H I H DLKP N+ +++D + DFGLA+ + + G
Sbjct: 140 GLRYIHA---AGIIHRDLKPGNLAVNEDCELKILDFGLAR----------QADSEMXGXV 186
Query: 569 GSIGYIPPEHMNGQVSILG--DIYSYGILLLEMFTGK 603
+ Y PE + + DI+S G ++ EM TGK
Sbjct: 187 VTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 91/225 (40%), Gaps = 36/225 (16%)
Query: 389 DNFSKENLIGTGSFGSVY-KGTLGDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNI 447
D F + +GTGSFG V + G A+K+L Q+ LK N + I
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN------EKRI 94
Query: 448 LRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLN------ 501
L+ + V LE F F N NL + A F L I R +
Sbjct: 95 LQAVNFPFLVKLE--------FSFKDNSNLYM-VMEYVAGGEMFSHLRRIGRFSEPHARF 145
Query: 502 IAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQ 561
A + +YLH + + DLKP N+L+D+ V DFG AK + +
Sbjct: 146 YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----------RVK 192
Query: 562 TVSIGLKGSIGYIPPE-HMNGQVSILGDIYSYGILLLEMFTGKRP 605
+ L G+ Y+ PE ++ + D ++ G+L+ EM G P
Sbjct: 193 GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 105/240 (43%), Gaps = 48/240 (20%)
Query: 385 SKSTDNFSKENLIGTGSFG----SVYKGTLGDGTIVAIKVLKLQQQGA--LKSFIDECNA 438
+K +DN+ + +G G+F V+K T G A K++ ++ A + E
Sbjct: 2 TKFSDNYDVKEELGKGAFSVVRRCVHKTT---GLEFAAKIINTKKLSARDFQKLEREARI 58
Query: 439 LKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNL------DQWLHPSPAEHYQFK 492
+ +H NI+R+ + ++ F LVF+ ++ G L ++ + A H
Sbjct: 59 CRKLQHPNIVRLHDS-----IQEESFHYLVFDLVTGGELFEDIVAREFYSEADASH---- 109
Query: 493 KLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLL---DKDMTAHVGDFGLAKF 549
IQ+ + ++ Y H I H +LKP N+LL K + DFGLA
Sbjct: 110 ---CIQQ------ILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLA-- 155
Query: 550 LFEISDNPSKNQTVSIGLKGSIGYIPPEHMNGQ-VSILGDIYSYGILLLEMFTGKRPTGD 608
E++D+ + + G G+ GY+ PE + S DI++ G++L + G P D
Sbjct: 156 -IEVNDSEAWH-----GFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWD 209
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 91/225 (40%), Gaps = 36/225 (16%)
Query: 389 DNFSKENLIGTGSFGSVYKGTLGD-GTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNI 447
D F + +GTGSFG V + G A+K+L Q+ LK N + I
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN------EKRI 94
Query: 448 LRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLN------ 501
L+ + V LE F F N NL + A F L I R +
Sbjct: 95 LQAVNFPFLVKLE--------FSFKDNSNLYM-VMEYVAGGEMFSHLRRIGRFSEPHARF 145
Query: 502 IAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQ 561
A + +YLH + + DLKP N+L+D+ V DFG AK + +
Sbjct: 146 YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----------RVK 192
Query: 562 TVSIGLKGSIGYIPPE-HMNGQVSILGDIYSYGILLLEMFTGKRP 605
+ L G+ Y+ PE ++ + D ++ G+L+ EM G P
Sbjct: 193 GRTWXLAGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 96/222 (43%), Gaps = 33/222 (14%)
Query: 389 DNFSKENLIGTGSFGSVYKGTLGD-GTIVAIK-VLKLQQQGALKSF-IDECNALKSTRHR 445
+ + K IG GS+G V+K D G IVAIK L+ + +K + E LK +H
Sbjct: 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHP 62
Query: 446 NILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRL--NIA 503
N++ ++ LVFE+ + L + + YQ V + L +I
Sbjct: 63 NLVNLLEV-----FRRKRRLHLVFEYCDHTVLHE------LDRYQ---RGVPEHLVKSIT 108
Query: 504 IDVASALDYLH-HHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQT 562
A+++ H H+C H D+KP N+L+ K + DFG A+ L PS
Sbjct: 109 WQTLQAVNFCHKHNC----IHRDVKPENILITKHSVIKLCDFGFARLL----TGPSDYYD 160
Query: 563 VSIGLKGSIGYIPPEHMNG--QVSILGDIYSYGILLLEMFTG 602
+ + Y PE + G Q D+++ G + E+ +G
Sbjct: 161 DEVATR---WYRSPELLVGDTQYGPPVDVWAIGCVFAELLSG 199
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 91/225 (40%), Gaps = 36/225 (16%)
Query: 389 DNFSKENLIGTGSFGSVYKGTLGD-GTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNI 447
D F + +GTGSFG V + G A+K+L Q+ LK N + I
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN------EKRI 94
Query: 448 LRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLN------ 501
L+ + V LE F F N NL + A F L I R +
Sbjct: 95 LQAVNFPFLVKLE--------FSFKDNSNLYM-VMEYVAGGEMFSHLRRIGRFSEPHARF 145
Query: 502 IAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQ 561
A + +YLH + + DLKP N+L+D+ V DFG AK + +
Sbjct: 146 YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----------RVK 192
Query: 562 TVSIGLKGSIGYIPPE-HMNGQVSILGDIYSYGILLLEMFTGKRP 605
+ L G+ Y+ PE ++ + D ++ G+L+ EM G P
Sbjct: 193 GRTWXLXGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 91/219 (41%), Gaps = 40/219 (18%)
Query: 397 IGTGSFGSVYKG-TLGDGTIVAIKVLKLQQQGAL--KSFIDECNALKSTRHRNI---LRV 450
IG+G++GSV G VA+K L Q + K E LK +H N+ L V
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 451 ITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASAL 510
T S++ E ND + ++ N +H QF + + L
Sbjct: 95 FTPARSLE-EFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF----------LIYQILRGL 143
Query: 511 DYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGS 570
Y+H I H DLKPSN+ +++D + DFGLA+ +D+ G +
Sbjct: 144 KYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARH----TDDE------MTGYVAT 190
Query: 571 IGYIPPE------HMNGQVSILGDIYSYGILLLEMFTGK 603
Y PE H N V DI+S G ++ E+ TG+
Sbjct: 191 RWYRAPEIMLNWMHYNQTV----DIWSVGCIMAELLTGR 225
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 91/225 (40%), Gaps = 36/225 (16%)
Query: 389 DNFSKENLIGTGSFGSVYKGTLGD-GTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNI 447
D F + +GTGSFG V + G A+K+L Q+ LK N + I
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN------EKRI 115
Query: 448 LRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLN------ 501
L+ + V LE F F N NL + A F L I R +
Sbjct: 116 LQAVNFPFLVKLE--------FSFKDNSNLYM-VMEYVAGGEMFSHLRRIGRFSEPHARF 166
Query: 502 IAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQ 561
A + +YLH + + DLKP N+L+D+ V DFG AK + +
Sbjct: 167 YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----------RVK 213
Query: 562 TVSIGLKGSIGYIPPE-HMNGQVSILGDIYSYGILLLEMFTGKRP 605
+ L G+ Y+ PE ++ + D ++ G+L+ EM G P
Sbjct: 214 GATWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 97/237 (40%), Gaps = 32/237 (13%)
Query: 378 GMSYSDISKSTDNFSKENLIGTGSFGSVYKGTL----GDGTIVAIKVLK-LQQQGALKSF 432
G S D + IG G FG V++G VAIK K + F
Sbjct: 1 GASTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKF 60
Query: 433 IDECNALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFK 492
+ E ++ H +I+++I + + ++ E + G L +L Y
Sbjct: 61 LQEALTMRQFDHPHIVKLIGVITENPV------WIIMELCTLGELRSFLQ---VRKYSLD 111
Query: 493 KLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFE 552
S+I A +++AL YL H D+ NVL+ + +GDFGL++++
Sbjct: 112 LASLIL---YAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-- 163
Query: 553 ISDNPSKNQTVSIGLKGS--IGYIPPEHMN-GQVSILGDIYSYGILLLEMFT-GKRP 605
++ T KG I ++ PE +N + + D++ +G+ + E+ G +P
Sbjct: 164 ------EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP 214
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 105/240 (43%), Gaps = 48/240 (20%)
Query: 385 SKSTDNFSKENLIGTGSFG----SVYKGTLGDGTIVAIKVLKLQQQGA--LKSFIDECNA 438
+K +DN+ + +G G+F V+K T G A K++ ++ A + E
Sbjct: 25 TKFSDNYDVKEELGKGAFSVVRRCVHKTT---GLEFAAKIINTKKLSARDFQKLEREARI 81
Query: 439 LKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNL------DQWLHPSPAEHYQFK 492
+ +H NI+R+ + ++ F LVF+ ++ G L ++ + A H
Sbjct: 82 CRKLQHPNIVRLHDS-----IQEESFHYLVFDLVTGGELFEDIVAREFYSEADASH---- 132
Query: 493 KLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLL---DKDMTAHVGDFGLAKF 549
IQ+ + ++ Y H I H +LKP N+LL K + DFGLA
Sbjct: 133 ---CIQQ------ILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLA-- 178
Query: 550 LFEISDNPSKNQTVSIGLKGSIGYIPPEHMNGQ-VSILGDIYSYGILLLEMFTGKRPTGD 608
E++D+ + + G G+ GY+ PE + S DI++ G++L + G P D
Sbjct: 179 -IEVNDSEAWH-----GFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWD 232
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 105/235 (44%), Gaps = 38/235 (16%)
Query: 385 SKSTDNFSKENLIGTGSFG----SVYKGTLGDGTIVAIKVLKLQQQGA--LKSFIDECNA 438
+K +DN+ + +G G+F V+K T G A K++ ++ A + E
Sbjct: 2 TKFSDNYDVKEELGKGAFSVVRRCVHKTT---GLEFAAKIINTKKLSARDFQKLEREARI 58
Query: 439 LKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLS-VI 497
+ +H NI+R+ + ++ F LVF+ ++ G L + + E Y S I
Sbjct: 59 CRKLQHPNIVRLHDS-----IQEESFHYLVFDLVTGGELFEDI--VAREFYSEADASHCI 111
Query: 498 QRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLL---DKDMTAHVGDFGLAKFLFEIS 554
Q+ + ++ Y H I H +LKP N+LL K + DFGLA E++
Sbjct: 112 QQ------ILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLA---IEVN 159
Query: 555 DNPSKNQTVSIGLKGSIGYIPPEHMNGQ-VSILGDIYSYGILLLEMFTGKRPTGD 608
D+ + + G G+ GY+ PE + S DI++ G++L + G P D
Sbjct: 160 DSEAWH-----GFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWD 209
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 111/240 (46%), Gaps = 37/240 (15%)
Query: 387 STDNFS---------KENLIGTGSFGSVYKG-TLGDGTIVAIKVLKLQQQGALKSFI-DE 435
STD+FS +E+++G G+ V L A+K+++ +Q G ++S + E
Sbjct: 2 STDSFSGRFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIE-KQPGHIRSRVFRE 60
Query: 436 CNALKSTR-HRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKL 494
L + HRN+L +I E D LVFE M G++ +H H+ +
Sbjct: 61 VEMLYQCQGHRNVLELIEF-----FEEEDRFYLVFEKMRGGSILSHIHKR--RHFNELEA 113
Query: 495 SVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLD---KDMTAHVGDFGLAKFLF 551
SV+ + DVASALD+LH + IAH DLKP N+L + + + DF L +
Sbjct: 114 SVVVQ-----DVASALDFLH---NKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIK 165
Query: 552 EISDNPSKNQTVSIGLKGSIGYIPPEHMNG---QVSILG---DIYSYGILLLEMFTGKRP 605
D + + GS Y+ PE + + SI D++S G++L + +G P
Sbjct: 166 LNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPP 225
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 93/228 (40%), Gaps = 28/228 (12%)
Query: 384 ISKSTDNFSKENLIGTGSFGSVYKGTLGD-GTIVAIKVLKLQQQGALKSFIDECNALK-- 440
I ++F ++G GSFG V+ AIK LK + L EC ++
Sbjct: 12 IKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALK--KDVVLMDDDVECTMVEKR 69
Query: 441 --STRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQ 498
S + C+ E F V E+++ G+L H + + +
Sbjct: 70 VLSLAWEHPFLTHMFCTFQTKENLFF---VMEYLNGGDL--MYHIQSCHKFDLSRATFY- 123
Query: 499 RLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPS 558
A ++ L +LH I + DLK N+LLDKD + DFG+ K E +
Sbjct: 124 ----AAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCK---ENMLGDA 173
Query: 559 KNQTVSIGLKGSIGYIPPEHMNGQ-VSILGDIYSYGILLLEMFTGKRP 605
K G+ YI PE + GQ + D +S+G+LL EM G+ P
Sbjct: 174 KTNXFC----GTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSP 217
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 105/242 (43%), Gaps = 38/242 (15%)
Query: 374 VRQSGMSYSDISKSTDNFSKENLIGTGSFGSVYKGTLGD-GTIVAIKVLKLQQQGALKSF 432
R+SG + S S +F +IG GS+ V L I A++V+K + L +
Sbjct: 39 TRESGKASS--SLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKE----LVND 92
Query: 433 IDECNALKSTRH-----RNILRVITACSSVDLEGNDFKALVFEFMSNGNLD---QWLHPS 484
++ + +++ +H N ++ S E F V E+++ G+L Q
Sbjct: 93 DEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLF--FVIEYVNGGDLMFHMQRQRKL 150
Query: 485 PAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDF 544
P EH +F + +++ AL+YLH I + DLK NVLLD + + D+
Sbjct: 151 PEEHARF----------YSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDY 197
Query: 545 GLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNGQ-VSILGDIYSYGILLLEMFTGK 603
G+ K D S G+ YI PE + G+ D ++ G+L+ EM G+
Sbjct: 198 GMCKEGLRPGDTTST-------FCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGR 250
Query: 604 RP 605
P
Sbjct: 251 SP 252
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 65/127 (51%), Gaps = 19/127 (14%)
Query: 496 VIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISD 555
++ ++ +AI AL YL + H D+KPSN+LLD+ + DFG++ L D
Sbjct: 125 ILGKMTVAI--VKALYYLKEK--HGVIHRDVKPSNILLDERGQIKLCDFGISGRLV---D 177
Query: 556 NPSKNQTVSIGLKGSIGYIPPEHMN------GQVSILGDIYSYGILLLEMFTGKRPTGDM 609
+ +K+++ G Y+ PE ++ I D++S GI L+E+ TG+ P +
Sbjct: 178 DKAKDRSA-----GCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNC 232
Query: 610 FKDDFSI 616
K DF +
Sbjct: 233 -KTDFEV 238
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 97/237 (40%), Gaps = 32/237 (13%)
Query: 378 GMSYSDISKSTDNFSKENLIGTGSFGSVYKGTL----GDGTIVAIKVLK-LQQQGALKSF 432
G S D + IG G FG V++G VAIK K + F
Sbjct: 27 GSSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKF 86
Query: 433 IDECNALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFK 492
+ E ++ H +I+++I + + ++ E + G L +L Y
Sbjct: 87 LQEALTMRQFDHPHIVKLIGVITENPV------WIIMELCTLGELRSFLQ---VRKYSLD 137
Query: 493 KLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFE 552
S+I A +++AL YL H D+ NVL+ + +GDFGL++++
Sbjct: 138 LASLIL---YAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-- 189
Query: 553 ISDNPSKNQTVSIGLKGS--IGYIPPEHMN-GQVSILGDIYSYGILLLEMFT-GKRP 605
++ T KG I ++ PE +N + + D++ +G+ + E+ G +P
Sbjct: 190 ------EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP 240
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 105/235 (44%), Gaps = 38/235 (16%)
Query: 385 SKSTDNFSKENLIGTGSFG----SVYKGTLGDGTIVAIKVLKLQQQGA--LKSFIDECNA 438
+K +DN+ + +G G+F V+K T G A K++ ++ A + E
Sbjct: 1 TKFSDNYDVKEELGKGAFSVVRRCVHKTT---GLEFAAKIINTKKLSARDFQKLEREARI 57
Query: 439 LKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLS-VI 497
+ +H NI+R+ + ++ F LVF+ ++ G L + + E Y S I
Sbjct: 58 CRKLQHPNIVRLHDS-----IQEESFHYLVFDLVTGGELFEDI--VAREFYSEADASHCI 110
Query: 498 QRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLL---DKDMTAHVGDFGLAKFLFEIS 554
Q+ + ++ Y H I H +LKP N+LL K + DFGLA E++
Sbjct: 111 QQ------ILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLA---IEVN 158
Query: 555 DNPSKNQTVSIGLKGSIGYIPPEHMNGQ-VSILGDIYSYGILLLEMFTGKRPTGD 608
D+ + + G G+ GY+ PE + S DI++ G++L + G P D
Sbjct: 159 DSEAWH-----GFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWD 208
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 91/219 (41%), Gaps = 40/219 (18%)
Query: 397 IGTGSFGSVYKG-TLGDGTIVAIKVLKLQQQGAL--KSFIDECNALKSTRHRNI---LRV 450
+G+G++GSV G VA+K L Q + K E LK +H N+ L V
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 451 ITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASAL 510
T S++ E ND + ++ N +H QF + + L
Sbjct: 90 FTPARSLE-EFNDVYLVTHLMGADLNNIVKXQKLTDDHVQF----------LIYQILRGL 138
Query: 511 DYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGS 570
Y+H I H DLKPSN+ +++D + DFGLA+ +D+ G +
Sbjct: 139 KYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARH----TDDE------MTGYVAT 185
Query: 571 IGYIPPE------HMNGQVSILGDIYSYGILLLEMFTGK 603
Y PE H N V DI+S G ++ E+ TG+
Sbjct: 186 RWYRAPEIMLNWMHYNQTV----DIWSVGCIMAELLTGR 220
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 91/219 (41%), Gaps = 40/219 (18%)
Query: 397 IGTGSFGSVYKG-TLGDGTIVAIKVLKLQQQGAL--KSFIDECNALKSTRHRNI---LRV 450
+G+G++GSV G VA+K L Q + K E LK +H N+ L V
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 100
Query: 451 ITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASAL 510
T S++ E ND + ++ N +H QF + + L
Sbjct: 101 FTPARSLE-EFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF----------LIYQILRGL 149
Query: 511 DYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGS 570
Y+H I H DLKPSN+ +++D + DFGLA+ +D+ G +
Sbjct: 150 KYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARH----TDDE------MTGYVAT 196
Query: 571 IGYIPPE------HMNGQVSILGDIYSYGILLLEMFTGK 603
Y PE H N V DI+S G ++ E+ TG+
Sbjct: 197 RWYRAPEIMLNWMHYNQTV----DIWSVGCIMAELLTGR 231
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 97/237 (40%), Gaps = 32/237 (13%)
Query: 378 GMSYSDISKSTDNFSKENLIGTGSFGSVYKGTL----GDGTIVAIKVLK-LQQQGALKSF 432
G S D + IG G FG V++G VAIK K + F
Sbjct: 4 GSSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKF 63
Query: 433 IDECNALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFK 492
+ E ++ H +I+++I + + ++ E + G L +L Y
Sbjct: 64 LQEALTMRQFDHPHIVKLIGVITENPV------WIIMELCTLGELRSFLQ---VRKYSLD 114
Query: 493 KLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFE 552
S+I A +++AL YL H D+ NVL+ + +GDFGL++++
Sbjct: 115 LASLIL---YAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-- 166
Query: 553 ISDNPSKNQTVSIGLKGS--IGYIPPEHMN-GQVSILGDIYSYGILLLEMFT-GKRP 605
++ T KG I ++ PE +N + + D++ +G+ + E+ G +P
Sbjct: 167 ------EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP 217
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 91/219 (41%), Gaps = 40/219 (18%)
Query: 397 IGTGSFGSVYKG-TLGDGTIVAIKVLKLQQQGAL--KSFIDECNALKSTRHRNI---LRV 450
+G+G++GSV G VA+K L Q + K E LK +H N+ L V
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 451 ITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASAL 510
T S++ E ND + ++ N +H QF + + L
Sbjct: 97 FTPARSLE-EFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF----------LIYQILRGL 145
Query: 511 DYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGS 570
Y+H I H DLKPSN+ +++D + DFGLA+ +D + G +
Sbjct: 146 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTADEMT-------GYVAT 192
Query: 571 IGYIPPE------HMNGQVSILGDIYSYGILLLEMFTGK 603
Y PE H N V DI+S G ++ E+ TG+
Sbjct: 193 RWYRAPEIMLNWMHYNQTV----DIWSVGCIMAELLTGR 227
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 91/219 (41%), Gaps = 40/219 (18%)
Query: 397 IGTGSFGSVYKG-TLGDGTIVAIKVLKLQQQGAL--KSFIDECNALKSTRHRNI---LRV 450
+G+G++GSV G VA+K L Q + K E LK +H N+ L V
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 451 ITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASAL 510
T S++ E ND + ++ N +H QF + + L
Sbjct: 97 FTPARSLE-EFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF----------LIYQILRGL 145
Query: 511 DYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGS 570
Y+H I H DLKPSN+ +++D + DFGLA+ +D + G +
Sbjct: 146 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTADEMT-------GYVAT 192
Query: 571 IGYIPPE------HMNGQVSILGDIYSYGILLLEMFTGK 603
Y PE H N V DI+S G ++ E+ TG+
Sbjct: 193 RWYRAPEIMLNWMHYNQTV----DIWSVGCIMAELLTGR 227
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 90/219 (41%), Gaps = 40/219 (18%)
Query: 397 IGTGSFGSVYKG-TLGDGTIVAIKVLKLQQQGAL--KSFIDECNALKSTRHRNI---LRV 450
+G+G++GSV + G +A+K L Q + K E LK +H N+ L V
Sbjct: 59 VGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 118
Query: 451 ITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASAL 510
T +S++ E ND + ++ N +H QF + + L
Sbjct: 119 FTPATSLE-EFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF----------LIYQILRGL 167
Query: 511 DYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGS 570
Y+H I H DLKPSN+ +++D + DFGLA+ G +
Sbjct: 168 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR----------HTDDEMTGYVAT 214
Query: 571 IGYIPPE------HMNGQVSILGDIYSYGILLLEMFTGK 603
Y PE H N V DI+S G ++ E+ TG+
Sbjct: 215 RWYRAPEIMLNWMHYNMTV----DIWSVGCIMAELLTGR 249
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 103/229 (44%), Gaps = 35/229 (15%)
Query: 389 DNFSKENLIGTGSFGSVYK-GTLGDGTIVAIKVLKLQQ-----QGALKSFID-ECNALKS 441
D++ +G+G F V K G G A K +K ++ +G + I+ E N L+
Sbjct: 26 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILRE 85
Query: 442 TRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLN 501
RH NI+ + E L+ E +S G L +L AE + Q L
Sbjct: 86 IRHPNIITLHDI-----FENKTDVVLILELVSGGELFDFL----AEKESLTEDEATQFLK 136
Query: 502 IAIDVASALDYLHHHCDTPIAHCDLKPSNV-LLDKDM---TAHVGDFGLAKFLFEISDNP 557
+D + YLH IAH DLKP N+ LLDK++ + DFG+A + + N
Sbjct: 137 QILD---GVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI--EAGNE 188
Query: 558 SKNQTVSIGLKGSIGYIPPEHMNGQ-VSILGDIYSYGILLLEMFTGKRP 605
KN + G+ ++ PE +N + + + D++S G++ + +G P
Sbjct: 189 FKN------IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 231
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 91/219 (41%), Gaps = 40/219 (18%)
Query: 397 IGTGSFGSVYKG-TLGDGTIVAIKVLKLQQQGAL--KSFIDECNALKSTRHRNI---LRV 450
+G+G++GSV G VA+K L Q + K E LK +H N+ L V
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 451 ITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASAL 510
T S++ E ND + ++ N +H QF + + L
Sbjct: 95 FTPARSLE-EFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF----------LIYQILRGL 143
Query: 511 DYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGS 570
Y+H I H DLKPSN+ +++D + DFGLA+ +D+ G +
Sbjct: 144 KYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARH----TDDE------MTGYVAT 190
Query: 571 IGYIPPE------HMNGQVSILGDIYSYGILLLEMFTGK 603
Y PE H N V DI+S G ++ E+ TG+
Sbjct: 191 RWYRAPEIMLNWMHYNQTV----DIWSVGCIMAELLTGR 225
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 91/219 (41%), Gaps = 40/219 (18%)
Query: 397 IGTGSFGSVYKG-TLGDGTIVAIKVLKLQQQGAL--KSFIDECNALKSTRHRNI---LRV 450
+G+G++GSV G VA+K L Q + K E LK +H N+ L V
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 451 ITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASAL 510
T S++ E ND + ++ N +H QF + + L
Sbjct: 92 FTPARSLE-EFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF----------LIYQILRGL 140
Query: 511 DYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGS 570
Y+H I H DLKPSN+ +++D + DFGLA+ +D+ G +
Sbjct: 141 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARH----TDDE------MTGYVAT 187
Query: 571 IGYIPPE------HMNGQVSILGDIYSYGILLLEMFTGK 603
Y PE H N V DI+S G ++ E+ TG+
Sbjct: 188 RWYRAPEIMLNWMHYNQTV----DIWSVGCIMAELLTGR 222
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 91/219 (41%), Gaps = 40/219 (18%)
Query: 397 IGTGSFGSVYKG-TLGDGTIVAIKVLKLQQQGAL--KSFIDECNALKSTRHRNI---LRV 450
+G+G++GSV G VA+K L Q + K E LK +H N+ L V
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 451 ITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASAL 510
T S++ E ND + ++ N +H QF + + L
Sbjct: 97 FTPARSLE-EFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF----------LIYQILRGL 145
Query: 511 DYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGS 570
Y+H I H DLKPSN+ +++D + DFGLA+ +D + G +
Sbjct: 146 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTADEMT-------GYVAT 192
Query: 571 IGYIPPE------HMNGQVSILGDIYSYGILLLEMFTGK 603
Y PE H N V DI+S G ++ E+ TG+
Sbjct: 193 RWYRAPEIMLNWMHYNQTV----DIWSVGCIMAELLTGR 227
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 91/219 (41%), Gaps = 40/219 (18%)
Query: 397 IGTGSFGSVYKG-TLGDGTIVAIKVLKLQQQGAL--KSFIDECNALKSTRHRNI---LRV 450
+G+G++GSV G VA+K L Q + K E LK +H N+ L V
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 100
Query: 451 ITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASAL 510
T S++ E ND + ++ N +H QF + + L
Sbjct: 101 FTPARSLE-EFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF----------LIYQILRGL 149
Query: 511 DYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGS 570
Y+H I H DLKPSN+ +++D + DFGLA+ +D+ G +
Sbjct: 150 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARH----TDDE------MTGYVAT 196
Query: 571 IGYIPPE------HMNGQVSILGDIYSYGILLLEMFTGK 603
Y PE H N V DI+S G ++ E+ TG+
Sbjct: 197 RWYRAPEIMLNWMHYNQTV----DIWSVGCIMAELLTGR 231
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 91/219 (41%), Gaps = 40/219 (18%)
Query: 397 IGTGSFGSVYKG-TLGDGTIVAIKVLKLQQQGAL--KSFIDECNALKSTRHRNI---LRV 450
+G+G++GSV G VA+K L Q + K E LK +H N+ L V
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 451 ITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASAL 510
T S++ E ND + ++ N +H QF + + L
Sbjct: 90 FTPARSLE-EFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF----------LIYQILRGL 138
Query: 511 DYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGS 570
Y+H I H DLKPSN+ +++D + DFGLA+ +D+ G +
Sbjct: 139 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARH----TDDEMA------GFVAT 185
Query: 571 IGYIPPE------HMNGQVSILGDIYSYGILLLEMFTGK 603
Y PE H N V DI+S G ++ E+ TG+
Sbjct: 186 RWYRAPEIMLNWMHYNQTV----DIWSVGCIMAELLTGR 220
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 91/219 (41%), Gaps = 40/219 (18%)
Query: 397 IGTGSFGSVYKG-TLGDGTIVAIKVLKLQQQGAL--KSFIDECNALKSTRHRNI---LRV 450
+G+G++GSV G VA+K L Q + K E LK +H N+ L V
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 451 ITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASAL 510
T S++ E ND + ++ N +H QF + + L
Sbjct: 90 FTPARSLE-EFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF----------LIYQILRGL 138
Query: 511 DYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGS 570
Y+H I H DLKPSN+ +++D + DFGLA+ +D+ G +
Sbjct: 139 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARH----TDDE------MTGYVAT 185
Query: 571 IGYIPPE------HMNGQVSILGDIYSYGILLLEMFTGK 603
Y PE H N V DI+S G ++ E+ TG+
Sbjct: 186 RWYRAPEIMLNAMHYNQTV----DIWSVGCIMAELLTGR 220
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 103/229 (44%), Gaps = 35/229 (15%)
Query: 389 DNFSKENLIGTGSFGSVYK-GTLGDGTIVAIKVLKLQQ-----QGALKSFID-ECNALKS 441
D++ +G+G F V K G G A K +K ++ +G + I+ E N L+
Sbjct: 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILRE 64
Query: 442 TRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLN 501
RH NI+ + E L+ E +S G L +L AE + Q L
Sbjct: 65 IRHPNIITLHDI-----FENKTDVVLILELVSGGELFDFL----AEKESLTEDEATQFLK 115
Query: 502 IAIDVASALDYLHHHCDTPIAHCDLKPSNV-LLDKDM---TAHVGDFGLAKFLFEISDNP 557
+D + YLH IAH DLKP N+ LLDK++ + DFG+A + + N
Sbjct: 116 QILD---GVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI--EAGNE 167
Query: 558 SKNQTVSIGLKGSIGYIPPEHMNGQ-VSILGDIYSYGILLLEMFTGKRP 605
KN + G+ ++ PE +N + + + D++S G++ + +G P
Sbjct: 168 FKN------IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 210
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 91/219 (41%), Gaps = 40/219 (18%)
Query: 397 IGTGSFGSVYKG-TLGDGTIVAIKVLKLQQQGAL--KSFIDECNALKSTRHRNI---LRV 450
+G+G++GSV G VA+K L Q + K E LK +H N+ L V
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 451 ITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASAL 510
T S++ E ND + ++ N +H QF + + L
Sbjct: 96 FTPARSLE-EFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF----------LIYQILRGL 144
Query: 511 DYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGS 570
Y+H I H DLKPSN+ +++D + DFGLA+ +D+ G +
Sbjct: 145 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARH----TDDE------MTGYVAT 191
Query: 571 IGYIPPE------HMNGQVSILGDIYSYGILLLEMFTGK 603
Y PE H N V DI+S G ++ E+ TG+
Sbjct: 192 RWYRAPEIMLNWMHYNQTV----DIWSVGCIMAELLTGR 226
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 91/219 (41%), Gaps = 40/219 (18%)
Query: 397 IGTGSFGSVYKG-TLGDGTIVAIKVLKLQQQGAL--KSFIDECNALKSTRHRNI---LRV 450
+G+G++GSV G VA+K L Q + K E LK +H N+ L V
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 451 ITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASAL 510
T S++ E ND + ++ N +H QF + + L
Sbjct: 90 FTPARSLE-EFNDVYLVTHLMGADLNNIVKXQKLTDDHVQF----------LIYQILRGL 138
Query: 511 DYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGS 570
Y+H I H DLKPSN+ +++D + DFGLA+ +D+ G +
Sbjct: 139 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARH----TDDE------MTGYVAT 185
Query: 571 IGYIPPE------HMNGQVSILGDIYSYGILLLEMFTGK 603
Y PE H N V DI+S G ++ E+ TG+
Sbjct: 186 RWYRAPEIMLNWMHYNQTV----DIWSVGCIMAELLTGR 220
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 91/219 (41%), Gaps = 40/219 (18%)
Query: 397 IGTGSFGSVYKG-TLGDGTIVAIKVLKLQQQGAL--KSFIDECNALKSTRHRNI---LRV 450
+G+G++GSV G VA+K L Q + K E LK +H N+ L V
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 451 ITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASAL 510
T S++ E ND + ++ N +H QF + + L
Sbjct: 102 FTPARSLE-EFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF----------LIYQILRGL 150
Query: 511 DYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGS 570
Y+H I H DLKPSN+ +++D + DFGLA+ +D+ G +
Sbjct: 151 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARH----TDDE------MTGYVAT 197
Query: 571 IGYIPPE------HMNGQVSILGDIYSYGILLLEMFTGK 603
Y PE H N V DI+S G ++ E+ TG+
Sbjct: 198 RWYRAPEIMLNWMHYNQTV----DIWSVGCIMAELLTGR 232
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 91/219 (41%), Gaps = 40/219 (18%)
Query: 397 IGTGSFGSVYKG-TLGDGTIVAIKVLKLQQQGAL--KSFIDECNALKSTRHRNI---LRV 450
+G+G++GSV G VA+K L Q + K E LK +H N+ L V
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 451 ITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASAL 510
T S++ E ND + ++ N +H QF + + L
Sbjct: 102 FTPARSLE-EFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF----------LIYQILRGL 150
Query: 511 DYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGS 570
Y+H I H DLKPSN+ +++D + DFGLA+ +D+ G +
Sbjct: 151 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARH----TDDE------MTGYVAT 197
Query: 571 IGYIPPE------HMNGQVSILGDIYSYGILLLEMFTGK 603
Y PE H N V DI+S G ++ E+ TG+
Sbjct: 198 RWYRAPEIMLNWMHYNQTV----DIWSVGCIMAELLTGR 232
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 91/219 (41%), Gaps = 40/219 (18%)
Query: 397 IGTGSFGSVYKG-TLGDGTIVAIKVLKLQQQGAL--KSFIDECNALKSTRHRNI---LRV 450
+G+G++GSV G VA+K L Q + K E LK +H N+ L V
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 451 ITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASAL 510
T S++ E ND + ++ N +H QF + + L
Sbjct: 95 FTPARSLE-EFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF----------LIYQILRGL 143
Query: 511 DYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGS 570
Y+H I H DLKPSN+ +++D + DFGLA+ +D+ G +
Sbjct: 144 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARH----TDDE------MTGYVAT 190
Query: 571 IGYIPPE------HMNGQVSILGDIYSYGILLLEMFTGK 603
Y PE H N V DI+S G ++ E+ TG+
Sbjct: 191 RWYRAPEIMLNWMHYNQTV----DIWSVGCIMAELLTGR 225
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 91/219 (41%), Gaps = 40/219 (18%)
Query: 397 IGTGSFGSVYKG-TLGDGTIVAIKVLKLQQQGAL--KSFIDECNALKSTRHRNI---LRV 450
+G+G++GSV G VA+K L Q + K E LK +H N+ L V
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 451 ITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASAL 510
T S++ E ND + ++ N +H QF + + L
Sbjct: 110 FTPARSLE-EFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF----------LIYQILRGL 158
Query: 511 DYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGS 570
Y+H I H DLKPSN+ +++D + DFGLA+ +D+ G +
Sbjct: 159 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARH----TDDE------MTGYVAT 205
Query: 571 IGYIPPE------HMNGQVSILGDIYSYGILLLEMFTGK 603
Y PE H N V DI+S G ++ E+ TG+
Sbjct: 206 RWYRAPEIMLNWMHYNQTV----DIWSVGCIMAELLTGR 240
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 91/219 (41%), Gaps = 40/219 (18%)
Query: 397 IGTGSFGSVYKG-TLGDGTIVAIKVLKLQQQGAL--KSFIDECNALKSTRHRNI---LRV 450
+G+G++GSV G VA+K L Q + K E LK +H N+ L V
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 451 ITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASAL 510
T S++ E ND + ++ N +H QF + + L
Sbjct: 86 FTPARSLE-EFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF----------LIYQILRGL 134
Query: 511 DYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGS 570
Y+H I H DLKPSN+ +++D + DFGLA+ +D+ G +
Sbjct: 135 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARH----TDDEMA------GFVAT 181
Query: 571 IGYIPPE------HMNGQVSILGDIYSYGILLLEMFTGK 603
Y PE H N V DI+S G ++ E+ TG+
Sbjct: 182 RWYRAPEIMLNWMHYNQTV----DIWSVGCIMAELLTGR 216
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 91/219 (41%), Gaps = 40/219 (18%)
Query: 397 IGTGSFGSVYKG-TLGDGTIVAIKVLKLQQQGAL--KSFIDECNALKSTRHRNI---LRV 450
+G+G++GSV G VA+K L Q + K E LK +H N+ L V
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 451 ITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASAL 510
T S++ E ND + ++ N +H QF + + L
Sbjct: 90 FTPARSLE-EFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF----------LIYQILRGL 138
Query: 511 DYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGS 570
Y+H I H DLKPSN+ +++D + DFGLA+ +D+ G +
Sbjct: 139 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARH----TDDEMA------GFVAT 185
Query: 571 IGYIPPE------HMNGQVSILGDIYSYGILLLEMFTGK 603
Y PE H N V DI+S G ++ E+ TG+
Sbjct: 186 RWYRAPEIMLNWMHYNQTV----DIWSVGCIMAELLTGR 220
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 91/219 (41%), Gaps = 40/219 (18%)
Query: 397 IGTGSFGSVYKG-TLGDGTIVAIKVLKLQQQGAL--KSFIDECNALKSTRHRNI---LRV 450
+G+G++GSV G VA+K L Q + K E LK +H N+ L V
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 451 ITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASAL 510
T S++ E ND + ++ N +H QF + + L
Sbjct: 90 FTPARSLE-EFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF----------LIYQILRGL 138
Query: 511 DYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGS 570
Y+H I H DLKPSN+ +++D + DFGLA+ +D+ G +
Sbjct: 139 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARH----TDDE------MTGYVAT 185
Query: 571 IGYIPPE------HMNGQVSILGDIYSYGILLLEMFTGK 603
Y PE H N V DI+S G ++ E+ TG+
Sbjct: 186 RWYRAPEIMLNWMHYNQTV----DIWSVGCIMAELLTGR 220
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 91/219 (41%), Gaps = 40/219 (18%)
Query: 397 IGTGSFGSVYKG-TLGDGTIVAIKVLKLQQQGAL--KSFIDECNALKSTRHRNI---LRV 450
+G+G++GSV G VA+K L Q + K E LK +H N+ L V
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 451 ITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASAL 510
T S++ E ND + ++ N +H QF + + L
Sbjct: 90 FTPARSLE-EFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF----------LIYQILRGL 138
Query: 511 DYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGS 570
Y+H I H DLKPSN+ +++D + DFGLA+ +D+ G +
Sbjct: 139 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARH----TDDE------MTGYVAT 185
Query: 571 IGYIPPE------HMNGQVSILGDIYSYGILLLEMFTGK 603
Y PE H N V DI+S G ++ E+ TG+
Sbjct: 186 RWYRAPEIMLNWMHYNQTV----DIWSVGCIMAELLTGR 220
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 91/219 (41%), Gaps = 40/219 (18%)
Query: 397 IGTGSFGSVYKG-TLGDGTIVAIKVLKLQQQGAL--KSFIDECNALKSTRHRNI---LRV 450
+G+G++GSV G VA+K L Q + K E LK +H N+ L V
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 112
Query: 451 ITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASAL 510
T S++ E ND + ++ N +H QF + + L
Sbjct: 113 FTPARSLE-EFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF----------LIYQILRGL 161
Query: 511 DYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGS 570
Y+H I H DLKPSN+ +++D + DFGLA+ +D+ G +
Sbjct: 162 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARH----TDDE------MTGYVAT 208
Query: 571 IGYIPPE------HMNGQVSILGDIYSYGILLLEMFTGK 603
Y PE H N V DI+S G ++ E+ TG+
Sbjct: 209 RWYRAPEIMLNWMHYNQTV----DIWSVGCIMAELLTGR 243
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 91/219 (41%), Gaps = 40/219 (18%)
Query: 397 IGTGSFGSVYKG-TLGDGTIVAIKVLKLQQQGAL--KSFIDECNALKSTRHRNI---LRV 450
+G+G++GSV G VA+K L Q + K E LK +H N+ L V
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 451 ITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASAL 510
T S++ E ND + ++ N +H QF + + L
Sbjct: 90 FTPARSLE-EFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF----------LIYQILRGL 138
Query: 511 DYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGS 570
Y+H I H DLKPSN+ +++D + DFGLA+ +D+ G +
Sbjct: 139 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARH----TDDE------MTGYVAT 185
Query: 571 IGYIPPE------HMNGQVSILGDIYSYGILLLEMFTGK 603
Y PE H N V DI+S G ++ E+ TG+
Sbjct: 186 RWYRAPEIMLNWMHYNQTV----DIWSVGCIMAELLTGR 220
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 91/219 (41%), Gaps = 40/219 (18%)
Query: 397 IGTGSFGSVYKG-TLGDGTIVAIKVLKLQQQGAL--KSFIDECNALKSTRHRNI---LRV 450
+G+G++GSV G VA+K L Q + K E LK +H N+ L V
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 451 ITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASAL 510
T S++ E ND + ++ N +H QF + + L
Sbjct: 97 FTPARSLE-EFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF----------LIYQILRGL 145
Query: 511 DYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGS 570
Y+H I H DLKPSN+ +++D + DFGLA+ +D+ G +
Sbjct: 146 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARH----TDDE------MTGYVAT 192
Query: 571 IGYIPPE------HMNGQVSILGDIYSYGILLLEMFTGK 603
Y PE H N V DI+S G ++ E+ TG+
Sbjct: 193 RWYRAPEIMLNWMHYNQTV----DIWSVGCIMAELLTGR 227
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 91/219 (41%), Gaps = 40/219 (18%)
Query: 397 IGTGSFGSVYKG-TLGDGTIVAIKVLKLQQQGAL--KSFIDECNALKSTRHRNI---LRV 450
+G+G++GSV G VA+K L Q + K E LK +H N+ L V
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 451 ITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASAL 510
T S++ E ND + ++ N +H QF + + L
Sbjct: 90 FTPARSLE-EFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF----------LIYQILRGL 138
Query: 511 DYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGS 570
Y+H I H DLKPSN+ +++D + DFGLA+ +D+ G +
Sbjct: 139 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARH----TDDE------MTGYVAT 185
Query: 571 IGYIPPE------HMNGQVSILGDIYSYGILLLEMFTGK 603
Y PE H N V DI+S G ++ E+ TG+
Sbjct: 186 RWYRAPEIMLNWMHYNQTV----DIWSVGCIMAELLTGR 220
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 91/219 (41%), Gaps = 40/219 (18%)
Query: 397 IGTGSFGSVYKG-TLGDGTIVAIKVLKLQQQGAL--KSFIDECNALKSTRHRNI---LRV 450
+G+G++GSV G VA+K L Q + K E LK +H N+ L V
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 451 ITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASAL 510
T S++ E ND + ++ N +H QF + + L
Sbjct: 90 FTPARSLE-EFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF----------LIYQILRGL 138
Query: 511 DYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGS 570
Y+H I H DLKPSN+ +++D + DFGLA+ +D+ G +
Sbjct: 139 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARH----TDDE------MTGYVAT 185
Query: 571 IGYIPPE------HMNGQVSILGDIYSYGILLLEMFTGK 603
Y PE H N V DI+S G ++ E+ TG+
Sbjct: 186 RWYRAPEIMLNWMHYNQTV----DIWSVGCIMAELLTGR 220
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 91/219 (41%), Gaps = 40/219 (18%)
Query: 397 IGTGSFGSVYKG-TLGDGTIVAIKVLKLQQQGAL--KSFIDECNALKSTRHRNI---LRV 450
+G+G++GSV G VA+K L Q + K E LK +H N+ L V
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 108
Query: 451 ITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASAL 510
T S++ E ND + ++ N +H QF + + L
Sbjct: 109 FTPARSLE-EFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF----------LIYQILRGL 157
Query: 511 DYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGS 570
Y+H I H DLKPSN+ +++D + DFGLA+ +D+ G +
Sbjct: 158 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARH----TDDE------MTGYVAT 204
Query: 571 IGYIPPE------HMNGQVSILGDIYSYGILLLEMFTGK 603
Y PE H N V DI+S G ++ E+ TG+
Sbjct: 205 RWYRAPEIMLNWMHYNQTV----DIWSVGCIMAELLTGR 239
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 91/219 (41%), Gaps = 40/219 (18%)
Query: 397 IGTGSFGSVYKG-TLGDGTIVAIKVLKLQQQGAL--KSFIDECNALKSTRHRNI---LRV 450
+G+G++GSV G VA+K L Q + K E LK +H N+ L V
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 451 ITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASAL 510
T S++ E ND + ++ N +H QF + + L
Sbjct: 102 FTPARSLE-EFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF----------LIYQILRGL 150
Query: 511 DYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGS 570
Y+H I H DLKPSN+ +++D + DFGLA+ +D+ G +
Sbjct: 151 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARH----TDDE------MTGYVAT 197
Query: 571 IGYIPPE------HMNGQVSILGDIYSYGILLLEMFTGK 603
Y PE H N V DI+S G ++ E+ TG+
Sbjct: 198 RWYRAPEIMLNWMHYNQTV----DIWSVGCIMAELLTGR 232
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 91/219 (41%), Gaps = 40/219 (18%)
Query: 397 IGTGSFGSVYKG-TLGDGTIVAIKVLKLQQQGAL--KSFIDECNALKSTRHRNI---LRV 450
+G+G++GSV G VA+K L Q + K E LK +H N+ L V
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 86
Query: 451 ITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASAL 510
T S++ E ND + ++ N +H QF + + L
Sbjct: 87 FTPARSLE-EFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF----------LIYQILRGL 135
Query: 511 DYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGS 570
Y+H I H DLKPSN+ +++D + DFGLA+ +D+ G +
Sbjct: 136 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARH----TDDE------MTGYVAT 182
Query: 571 IGYIPPE------HMNGQVSILGDIYSYGILLLEMFTGK 603
Y PE H N V DI+S G ++ E+ TG+
Sbjct: 183 RWYRAPEIMLNWMHYNQTV----DIWSVGCIMAELLTGR 217
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 91/219 (41%), Gaps = 40/219 (18%)
Query: 397 IGTGSFGSVYKG-TLGDGTIVAIKVLKLQQQGAL--KSFIDECNALKSTRHRNI---LRV 450
+G+G++GSV G VA+K L Q + K E LK +H N+ L V
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 451 ITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASAL 510
T S++ E ND + ++ N +H QF + + L
Sbjct: 95 FTPARSLE-EFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF----------LIYQILRGL 143
Query: 511 DYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGS 570
Y+H I H DLKPSN+ +++D + DFGLA+ +D+ G +
Sbjct: 144 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARH----TDDE------MTGYVAT 190
Query: 571 IGYIPPE------HMNGQVSILGDIYSYGILLLEMFTGK 603
Y PE H N V DI+S G ++ E+ TG+
Sbjct: 191 RWYRAPEIMLNWMHYNQTV----DIWSVGCIMAELLTGR 225
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 91/219 (41%), Gaps = 40/219 (18%)
Query: 397 IGTGSFGSVYKG-TLGDGTIVAIKVLKLQQQGAL--KSFIDECNALKSTRHRNI---LRV 450
+G+G++GSV G VA+K L Q + K E LK +H N+ L V
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 451 ITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASAL 510
T S++ E ND + ++ N +H QF + + L
Sbjct: 96 FTPARSLE-EFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF----------LIYQILRGL 144
Query: 511 DYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGS 570
Y+H I H DLKPSN+ +++D + DFGLA+ +D+ G +
Sbjct: 145 KYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLARH----TDDE------MTGYVAT 191
Query: 571 IGYIPPE------HMNGQVSILGDIYSYGILLLEMFTGK 603
Y PE H N V DI+S G ++ E+ TG+
Sbjct: 192 RWYRAPEIMLNWMHYNQTV----DIWSVGCIMAELLTGR 226
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 91/219 (41%), Gaps = 40/219 (18%)
Query: 397 IGTGSFGSVYKG-TLGDGTIVAIKVLKLQQQGAL--KSFIDECNALKSTRHRNI---LRV 450
+G+G++GSV G VA+K L Q + K E LK +H N+ L V
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 88
Query: 451 ITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASAL 510
T S++ E ND + ++ N +H QF + + L
Sbjct: 89 FTPARSLE-EFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF----------LIYQILRGL 137
Query: 511 DYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGS 570
Y+H I H DLKPSN+ +++D + DFGLA+ +D+ G +
Sbjct: 138 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARH----TDDE------MTGYVAT 184
Query: 571 IGYIPPE------HMNGQVSILGDIYSYGILLLEMFTGK 603
Y PE H N V DI+S G ++ E+ TG+
Sbjct: 185 RWYRAPEIMLNWMHYNQTV----DIWSVGCIMAELLTGR 219
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 91/219 (41%), Gaps = 40/219 (18%)
Query: 397 IGTGSFGSVYKG-TLGDGTIVAIKVLKLQQQGAL--KSFIDECNALKSTRHRNI---LRV 450
+G+G++GSV G VA+K L Q + K E LK +H N+ L V
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 112
Query: 451 ITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASAL 510
T S++ E ND + ++ N +H QF + + L
Sbjct: 113 FTPARSLE-EFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF----------LIYQILRGL 161
Query: 511 DYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGS 570
Y+H I H DLKPSN+ +++D + DFGLA+ +D+ G +
Sbjct: 162 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARH----TDDEMX------GYVAT 208
Query: 571 IGYIPPE------HMNGQVSILGDIYSYGILLLEMFTGK 603
Y PE H N V DI+S G ++ E+ TG+
Sbjct: 209 RWYRAPEIMLNWMHYNQTV----DIWSVGCIMAELLTGR 243
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 91/219 (41%), Gaps = 40/219 (18%)
Query: 397 IGTGSFGSVYKG-TLGDGTIVAIKVLKLQQQGAL--KSFIDECNALKSTRHRNI---LRV 450
+G+G++GSV G VA+K L Q + K E LK +H N+ L V
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 451 ITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASAL 510
T S++ E ND + ++ N +H QF + + L
Sbjct: 90 FTPARSLE-EFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF----------LIYQILRGL 138
Query: 511 DYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGS 570
Y+H I H DLKPSN+ +++D + DFGLA+ +D+ G +
Sbjct: 139 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARH----TDDE------MTGYVAT 185
Query: 571 IGYIPPE------HMNGQVSILGDIYSYGILLLEMFTGK 603
Y PE H N V DI+S G ++ E+ TG+
Sbjct: 186 RWYRAPEIMLNWMHYNQTV----DIWSVGCIMAELLTGR 220
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 102/249 (40%), Gaps = 44/249 (17%)
Query: 368 GTIPKEVRQS-GMSYSDISKSTDNFSKENLIGTGSFGSVYKG-TLGDGTIVAIKVLKLQQ 425
G+ P RQ + ++ + N S +G+G++GSV G VA+K L
Sbjct: 1 GSRPTFYRQELNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPF 57
Query: 426 QGAL--KSFIDECNALKSTRHRNI---LRVITACSSVDLEGNDFKALVFEFMSNGNLDQW 480
Q + K E LK +H N+ L V T S++ E ND + ++ N
Sbjct: 58 QSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLE-EFNDVYLVTHLMGADLNNIVK 116
Query: 481 LHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAH 540
+H QF + + L Y+H I H DLKPSN+ +++D
Sbjct: 117 CQKLTDDHVQF----------LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELK 163
Query: 541 VGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPE------HMNGQVSILGDIYSYGI 594
+ DFGLA+ +D+ G + Y PE H N V DI+S G
Sbjct: 164 ILDFGLARH----TDDE------MTGYVATRWYRAPEIMLNWMHYNQTV----DIWSVGC 209
Query: 595 LLLEMFTGK 603
++ E+ TG+
Sbjct: 210 IMAELLTGR 218
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 91/219 (41%), Gaps = 40/219 (18%)
Query: 397 IGTGSFGSVYKG-TLGDGTIVAIKVLKLQQQGAL--KSFIDECNALKSTRHRNI---LRV 450
+G+G++GSV G VA+K L Q + K E LK +H N+ L V
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 451 ITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASAL 510
T S++ E ND + ++ N +H QF + + L
Sbjct: 90 FTPARSLE-EFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF----------LIYQILRGL 138
Query: 511 DYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGS 570
Y+H I H DLKPSN+ +++D + DFGLA+ +D+ G +
Sbjct: 139 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARH----TDDE------MTGYVAT 185
Query: 571 IGYIPPE------HMNGQVSILGDIYSYGILLLEMFTGK 603
Y PE H N V DI+S G ++ E+ TG+
Sbjct: 186 RWYRAPEIMLNWMHYNQTV----DIWSVGCIMAELLTGR 220
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 91/219 (41%), Gaps = 40/219 (18%)
Query: 397 IGTGSFGSVYKG-TLGDGTIVAIKVLKLQQQGAL--KSFIDECNALKSTRHRNI---LRV 450
+G+G++GSV G VA+K L Q + K E LK +H N+ L V
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 451 ITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASAL 510
T S++ E ND + ++ N +H QF + + L
Sbjct: 92 FTPARSLE-EFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF----------LIYQILRGL 140
Query: 511 DYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGS 570
Y+H I H DLKPSN+ +++D + DFGLA+ +D+ G +
Sbjct: 141 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARH----TDDE------MTGYVAT 187
Query: 571 IGYIPPE------HMNGQVSILGDIYSYGILLLEMFTGK 603
Y PE H N V DI+S G ++ E+ TG+
Sbjct: 188 RWYRAPEIMLNWMHYNQTV----DIWSVGCIMAELLTGR 222
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 91/219 (41%), Gaps = 40/219 (18%)
Query: 397 IGTGSFGSVYKG-TLGDGTIVAIKVLKLQQQGAL--KSFIDECNALKSTRHRNI---LRV 450
+G+G++GSV G VA+K L Q + K E LK +H N+ L V
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 108
Query: 451 ITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASAL 510
T S++ E ND + ++ N +H QF + + L
Sbjct: 109 FTPARSLE-EFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF----------LIYQILRGL 157
Query: 511 DYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGS 570
Y+H I H DLKPSN+ +++D + DFGLA+ +D+ G +
Sbjct: 158 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARH----TDDE------MTGYVAT 204
Query: 571 IGYIPPE------HMNGQVSILGDIYSYGILLLEMFTGK 603
Y PE H N V DI+S G ++ E+ TG+
Sbjct: 205 RWYRAPEIMLNWMHYNQTV----DIWSVGCIMAELLTGR 239
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 91/219 (41%), Gaps = 40/219 (18%)
Query: 397 IGTGSFGSVYKG-TLGDGTIVAIKVLKLQQQGAL--KSFIDECNALKSTRHRNI---LRV 450
+G+G++GSV G VA+K L Q + K E LK +H N+ L V
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 86
Query: 451 ITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASAL 510
T S++ E ND + ++ N +H QF + + L
Sbjct: 87 FTPARSLE-EFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF----------LIYQILRGL 135
Query: 511 DYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGS 570
Y+H I H DLKPSN+ +++D + DFGLA+ +D+ G +
Sbjct: 136 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARH----TDDE------MTGYVAT 182
Query: 571 IGYIPPE------HMNGQVSILGDIYSYGILLLEMFTGK 603
Y PE H N V DI+S G ++ E+ TG+
Sbjct: 183 RWYRAPEIMLNWMHYNQTV----DIWSVGCIMAELLTGR 217
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 91/219 (41%), Gaps = 40/219 (18%)
Query: 397 IGTGSFGSVYKG-TLGDGTIVAIKVLKLQQQGAL--KSFIDECNALKSTRHRNI---LRV 450
+G+G++GSV G VA+K L Q + K E LK +H N+ L V
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 451 ITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASAL 510
T S++ E ND + ++ N +H QF + + L
Sbjct: 86 FTPARSLE-EFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF----------LIYQILRGL 134
Query: 511 DYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGS 570
Y+H I H DLKPSN+ +++D + DFGLA+ +D+ G +
Sbjct: 135 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARH----TDDE------MTGYVAT 181
Query: 571 IGYIPPE------HMNGQVSILGDIYSYGILLLEMFTGK 603
Y PE H N V DI+S G ++ E+ TG+
Sbjct: 182 RWYRAPEIMLNWMHYNQTV----DIWSVGCIMAELLTGR 216
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 91/225 (40%), Gaps = 36/225 (16%)
Query: 389 DNFSKENLIGTGSFGSVYKGTLGD-GTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNI 447
D F + +GTGSFG V + G A+K+L Q+ LK N + I
Sbjct: 28 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN------EKRI 81
Query: 448 LRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLN------ 501
L+ + V LE F F N NL + A F L I R +
Sbjct: 82 LQAVNFPFLVKLE--------FSFKDNSNLYM-VMEYVAGGEMFSHLRRIGRFSEPHARF 132
Query: 502 IAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQ 561
A + +YLH + + DLKP N+L+D+ V DFG AK + +
Sbjct: 133 YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDEQGYIQVTDFGFAK----------RVK 179
Query: 562 TVSIGLKGSIGYIPPE-HMNGQVSILGDIYSYGILLLEMFTGKRP 605
+ L G+ Y+ PE ++ + D ++ G+L+ EM G P
Sbjct: 180 GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 224
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 91/222 (40%), Gaps = 30/222 (13%)
Query: 390 NFSKENLIGTGSFGSVYKGT-LGDGTIVAIKVLKLQQ--QGALKSFIDECNALKSTRHRN 446
N+ IG G+F V + G VA+K++ Q +L+ E K H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPN 74
Query: 447 ILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDV 506
I+++ +E LV E+ S G + +L H + K+ + +
Sbjct: 75 IVKLFEV-----IETEKTLYLVXEYASGGEVFDYL----VAHGRXKEKEARAKFR---QI 122
Query: 507 ASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLA-KFLFEISDNPSKNQTVSI 565
SA+ Y H I H DLK N+LLD D + DFG + +F F N+ +
Sbjct: 123 VSAVQYCHQKF---IVHRDLKAENLLLDADXNIKIADFGFSNEFTF-------GNKLDAF 172
Query: 566 GLKGSIGYIPPEHMNGQV--SILGDIYSYGILLLEMFTGKRP 605
G+ Y PE G+ D++S G++L + +G P
Sbjct: 173 C--GAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 212
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 91/225 (40%), Gaps = 36/225 (16%)
Query: 389 DNFSKENLIGTGSFGSVYKGTLGD-GTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNI 447
D F + +GTGSFG V + G A+K+L Q+ LK N + I
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN------EKRI 94
Query: 448 LRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLN------ 501
L+ + V LE F F N NL + A F L I R +
Sbjct: 95 LQAVNFPFLVKLE--------FSFKDNSNLYM-VMEYVAGGEMFSHLRRIGRFSEPHARF 145
Query: 502 IAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQ 561
A + +YLH + + DLKP N+L+D+ V DFG AK + +
Sbjct: 146 YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----------RVK 192
Query: 562 TVSIGLKGSIGYIPPE-HMNGQVSILGDIYSYGILLLEMFTGKRP 605
+ L G+ Y+ PE ++ + D ++ G+L+ EM G P
Sbjct: 193 GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 91/219 (41%), Gaps = 40/219 (18%)
Query: 397 IGTGSFGSVYKG-TLGDGTIVAIKVLKLQQQGAL--KSFIDECNALKSTRHRNI---LRV 450
+G+G++GSV G VA+K L Q + K E LK +H N+ L V
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 451 ITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASAL 510
T S++ E ND + ++ N +H QF + + L
Sbjct: 110 FTPARSLE-EFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF----------LIYQILRGL 158
Query: 511 DYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGS 570
Y+H I H DLKPSN+ +++D + DFGLA+ +D+ G +
Sbjct: 159 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARH----TDDE------MTGYVAT 205
Query: 571 IGYIPPE------HMNGQVSILGDIYSYGILLLEMFTGK 603
Y PE H N V DI+S G ++ E+ TG+
Sbjct: 206 RWYRAPEIMLNWMHYNQTV----DIWSVGCIMAELLTGR 240
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 91/225 (40%), Gaps = 36/225 (16%)
Query: 389 DNFSKENLIGTGSFGSVYKGTLGD-GTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNI 447
D F + +GTGSFG V + G A+K+L Q+ LK N + I
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN------EKRI 94
Query: 448 LRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLN------ 501
L+ + V LE F F N NL + A F L I R +
Sbjct: 95 LQAVNFPFLVKLE--------FSFKDNSNLYM-VMEYVAGGEMFSHLRRIGRFSEPHARF 145
Query: 502 IAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQ 561
A + +YLH + + DLKP N+L+D+ V DFG AK + +
Sbjct: 146 YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----------RVK 192
Query: 562 TVSIGLKGSIGYIPPE-HMNGQVSILGDIYSYGILLLEMFTGKRP 605
+ L G+ Y+ PE ++ + D ++ G+L+ EM G P
Sbjct: 193 GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 91/219 (41%), Gaps = 40/219 (18%)
Query: 397 IGTGSFGSVYKG-TLGDGTIVAIKVLKLQQQGAL--KSFIDECNALKSTRHRNI---LRV 450
+G+G++GSV G VA+K L Q + K E LK +H N+ L V
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 451 ITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASAL 510
T S++ E ND + ++ N +H QF + + L
Sbjct: 90 FTPARSLE-EFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF----------LIYQILRGL 138
Query: 511 DYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGS 570
Y+H I H DLKPSN+ +++D + DFGLA+ +D+ G +
Sbjct: 139 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARH----TDDE------MTGYVAT 185
Query: 571 IGYIPPE------HMNGQVSILGDIYSYGILLLEMFTGK 603
Y PE H N V DI+S G ++ E+ TG+
Sbjct: 186 RWYRAPEIMLNWMHYNQTV----DIWSVGCIMAELLTGR 220
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 91/219 (41%), Gaps = 40/219 (18%)
Query: 397 IGTGSFGSVYKG-TLGDGTIVAIKVLKLQQQGAL--KSFIDECNALKSTRHRNI---LRV 450
+G+G++GSV G VA+K L Q + K E LK +H N+ L V
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 451 ITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASAL 510
T S++ E ND + ++ N +H QF + + L
Sbjct: 92 FTPARSLE-EFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF----------LIYQILRGL 140
Query: 511 DYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGS 570
Y+H I H DLKPSN+ +++D + DFGLA+ +D+ G +
Sbjct: 141 KYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLARH----TDDE------MTGYVAT 187
Query: 571 IGYIPPE------HMNGQVSILGDIYSYGILLLEMFTGK 603
Y PE H N V DI+S G ++ E+ TG+
Sbjct: 188 RWYRAPEIMLNWMHYNQTV----DIWSVGCIMAELLTGR 222
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 91/219 (41%), Gaps = 40/219 (18%)
Query: 397 IGTGSFGSVYKG-TLGDGTIVAIKVLKLQQQGAL--KSFIDECNALKSTRHRNI---LRV 450
+G+G++GSV G VA+K L Q + K E LK +H N+ L V
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 451 ITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASAL 510
T S++ E ND + ++ N +H QF + + L
Sbjct: 90 FTPARSLE-EFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF----------LIYQILRGL 138
Query: 511 DYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGS 570
Y+H I H DLKPSN+ +++D + DFGLA+ +D+ G +
Sbjct: 139 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARH----TDDE------MTGXVAT 185
Query: 571 IGYIPPE------HMNGQVSILGDIYSYGILLLEMFTGK 603
Y PE H N V DI+S G ++ E+ TG+
Sbjct: 186 RWYRAPEIMLNWMHYNQTV----DIWSVGCIMAELLTGR 220
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 91/225 (40%), Gaps = 36/225 (16%)
Query: 389 DNFSKENLIGTGSFGSVYKGTLGD-GTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNI 447
D F + +GTGSFG V + G A+K+L Q+ LK N + I
Sbjct: 42 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN------EKRI 95
Query: 448 LRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLN------ 501
L+ + V LE F F N NL + A F L I R +
Sbjct: 96 LQAVNFPFLVKLE--------FSFKDNSNLYM-VMEYVAGGEMFSHLRRIGRFSEPHARF 146
Query: 502 IAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQ 561
A + +YLH + + DLKP N+L+D+ V DFG AK + +
Sbjct: 147 YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----------RVK 193
Query: 562 TVSIGLKGSIGYIPPE-HMNGQVSILGDIYSYGILLLEMFTGKRP 605
+ L G+ Y+ PE ++ + D ++ G+L+ EM G P
Sbjct: 194 GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 91/219 (41%), Gaps = 40/219 (18%)
Query: 397 IGTGSFGSVYKG-TLGDGTIVAIKVLKLQQQGAL--KSFIDECNALKSTRHRNI---LRV 450
+G+G++GSV G VA+K L Q + K E LK +H N+ L V
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 451 ITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASAL 510
T S++ E ND + ++ N +H QF + + L
Sbjct: 92 FTPARSLE-EFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF----------LIYQILRGL 140
Query: 511 DYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGS 570
Y+H I H DLKPSN+ +++D + DFGLA+ +D+ G +
Sbjct: 141 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARH----TDDE------MTGYVAT 187
Query: 571 IGYIPPE------HMNGQVSILGDIYSYGILLLEMFTGK 603
Y PE H N V DI+S G ++ E+ TG+
Sbjct: 188 RWYRAPEIMLNWMHYNQTV----DIWSVGCIMAELLTGR 222
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 91/219 (41%), Gaps = 40/219 (18%)
Query: 397 IGTGSFGSVYKG-TLGDGTIVAIKVLKLQQQGAL--KSFIDECNALKSTRHRNI---LRV 450
+G+G++GSV G VA+K L Q + K E LK +H N+ L V
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 451 ITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASAL 510
T S++ E ND + ++ N +H QF + + L
Sbjct: 110 FTPARSLE-EFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF----------LIYQILRGL 158
Query: 511 DYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGS 570
Y+H I H DLKPSN+ +++D + DFGLA+ +D+ G +
Sbjct: 159 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARH----TDDEMX------GXVAT 205
Query: 571 IGYIPPE------HMNGQVSILGDIYSYGILLLEMFTGK 603
Y PE H N V DI+S G ++ E+ TG+
Sbjct: 206 RWYRAPEIMLNWMHYNQTV----DIWSVGCIMAELLTGR 240
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 91/219 (41%), Gaps = 40/219 (18%)
Query: 397 IGTGSFGSVYKG-TLGDGTIVAIKVLKLQQQGAL--KSFIDECNALKSTRHRNI---LRV 450
+G+G++GSV G VA+K L Q + K E LK +H N+ L V
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 451 ITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASAL 510
T S++ E ND + ++ N +H QF + + L
Sbjct: 86 FTPARSLE-EFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF----------LIYQILRGL 134
Query: 511 DYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGS 570
Y+H I H DLKPSN+ +++D + DFGLA+ +D+ G +
Sbjct: 135 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARH----TDDE------MTGYVAT 181
Query: 571 IGYIPPE------HMNGQVSILGDIYSYGILLLEMFTGK 603
Y PE H N V DI+S G ++ E+ TG+
Sbjct: 182 RWYRAPEIMLNWMHYNQTV----DIWSVGCIMAELLTGR 216
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 91/225 (40%), Gaps = 36/225 (16%)
Query: 389 DNFSKENLIGTGSFGSVYKGTLGD-GTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNI 447
D F + +GTGSFG V + G A+K+L Q+ LK N + I
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN------EKRI 94
Query: 448 LRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLN------ 501
L+ + V LE F F N NL + A F L I R +
Sbjct: 95 LQAVNFPFLVKLE--------FSFKDNSNLYM-VMEYVAGGEMFSHLRRIGRFSEPHARF 145
Query: 502 IAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQ 561
A + +YLH + + DLKP N+L+D+ V DFG AK + +
Sbjct: 146 YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----------RVK 192
Query: 562 TVSIGLKGSIGYIPPE-HMNGQVSILGDIYSYGILLLEMFTGKRP 605
+ L G+ Y+ PE ++ + D ++ G+L+ EM G P
Sbjct: 193 GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 91/225 (40%), Gaps = 36/225 (16%)
Query: 389 DNFSKENLIGTGSFGSVYKGTLGD-GTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNI 447
D F + +GTGSFG V + G A+K+L Q+ LK N + I
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN------EKRI 94
Query: 448 LRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLN------ 501
L+ + V LE F F N NL + A F L I R +
Sbjct: 95 LQAVNFPFLVKLE--------FSFKDNSNLYM-VMEYVAGGEMFSHLRRIGRFSEPHARF 145
Query: 502 IAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQ 561
A + +YLH + + DLKP N+L+D+ V DFG AK + +
Sbjct: 146 YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----------RVK 192
Query: 562 TVSIGLKGSIGYIPPE-HMNGQVSILGDIYSYGILLLEMFTGKRP 605
+ L G+ Y+ PE ++ + D ++ G+L+ EM G P
Sbjct: 193 GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 91/225 (40%), Gaps = 36/225 (16%)
Query: 389 DNFSKENLIGTGSFGSVYKGTLGD-GTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNI 447
D F + +GTGSFG V + G A+K+L Q+ LK N + I
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN------EKRI 94
Query: 448 LRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLN------ 501
L+ + V LE F F N NL + A F L I R +
Sbjct: 95 LQAVNFPFLVKLE--------FSFKDNSNLYM-VMEYVAGGEMFSHLRRIGRFSEPHARF 145
Query: 502 IAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQ 561
A + +YLH + + DLKP N+L+D+ V DFG AK + +
Sbjct: 146 YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----------RVK 192
Query: 562 TVSIGLKGSIGYIPPE-HMNGQVSILGDIYSYGILLLEMFTGKRP 605
+ L G+ Y+ PE ++ + D ++ G+L+ EM G P
Sbjct: 193 GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 95/220 (43%), Gaps = 36/220 (16%)
Query: 397 IGTGSFGSVYKGTL----GDGTIVAIKVLK-LQQQGALKSFIDECNALKSTRHRNILRVI 451
IG G FG V++G VAIK K + F+ E ++ H +I+++I
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 452 TACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSV--IQRLNIAIDVASA 509
+ + ++ E + G L +L Q +K S+ + A +++A
Sbjct: 78 GVITENPV------WIIMELCTLGELRSFL--------QVRKFSLDLASLILYAYQLSTA 123
Query: 510 LDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKG 569
L YL H D+ NVL+ + +GDFGL++++ ++ T KG
Sbjct: 124 LAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM--------EDSTXXKASKG 172
Query: 570 S--IGYIPPEHMN-GQVSILGDIYSYGILLLEMFT-GKRP 605
I ++ PE +N + + D++ +G+ + E+ G +P
Sbjct: 173 KLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP 212
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 91/219 (41%), Gaps = 40/219 (18%)
Query: 397 IGTGSFGSVYKG-TLGDGTIVAIKVLKLQQQGAL--KSFIDECNALKSTRHRNI---LRV 450
+G+G++GSV G VA+K L Q + K E LK +H N+ L V
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 451 ITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASAL 510
T S++ E ND + ++ N +H QF + + L
Sbjct: 96 FTPARSLE-EFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF----------LIYQILRGL 144
Query: 511 DYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGS 570
Y+H I H DLKPSN+ +++D + DFGLA+ +D+ G +
Sbjct: 145 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARH----TDDE------MTGYVAT 191
Query: 571 IGYIPPE------HMNGQVSILGDIYSYGILLLEMFTGK 603
Y PE H N V DI+S G ++ E+ TG+
Sbjct: 192 RWYRAPEIMLNWMHYNQTV----DIWSVGCIMAELLTGR 226
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 91/219 (41%), Gaps = 40/219 (18%)
Query: 397 IGTGSFGSVYKG-TLGDGTIVAIKVLKLQQQGAL--KSFIDECNALKSTRHRNI---LRV 450
+G+G++GSV G VA+K L Q + K E LK +H N+ L V
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 99
Query: 451 ITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASAL 510
T S++ E ND + ++ N +H QF + + L
Sbjct: 100 FTPARSLE-EFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF----------LIYQILRGL 148
Query: 511 DYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGS 570
Y+H I H DLKPSN+ +++D + DFGLA+ +D+ G +
Sbjct: 149 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARH----TDDE------MTGYVAT 195
Query: 571 IGYIPPE------HMNGQVSILGDIYSYGILLLEMFTGK 603
Y PE H N V DI+S G ++ E+ TG+
Sbjct: 196 RWYRAPEIMLNWMHYNQTV----DIWSVGCIMAELLTGR 230
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 112/273 (41%), Gaps = 51/273 (18%)
Query: 378 GMSYSDISKSTDNFSKE-----NLIGTGSFGSVYK----GTLGDGTIVAIKVLKLQQQGA 428
G S + +++ + E ++G G +G V++ G I A+KVLK
Sbjct: 1 GSSETSVNRGPEKIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLK------ 54
Query: 429 LKSFIDECNALKSTRH----RNILRVITACSSVDL----EGNDFKALVFEFMSNGNLDQW 480
K+ I K T H RNIL + VDL + L+ E++S G L
Sbjct: 55 -KAMI--VRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGEL--- 108
Query: 481 LHPSPAEHYQFKKLSVIQRLNIAI---DVASALDYLHHHCDTPIAHCDLKPSNVLLDKDM 537
Q ++ + +++ AL +LH I + DLKP N++L+
Sbjct: 109 -------FMQLEREGIFMEDTACFYLAEISMALGHLHQKG---IIYRDLKPENIMLNHQG 158
Query: 538 TAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPE-HMNGQVSILGDIYSYGILL 596
+ DFGL K I D TV+ G+I Y+ PE M + D +S G L+
Sbjct: 159 HVKLTDFGLCK--ESIHDG-----TVTHXFCGTIEYMAPEILMRSGHNRAVDWWSLGALM 211
Query: 597 LEMFTGKRP-TGDMFKDDFSIHMFVSMALPDHV 628
+M TG P TG+ K + + LP ++
Sbjct: 212 YDMLTGAPPFTGENRKKTIDKILKCKLNLPPYL 244
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 93/218 (42%), Gaps = 32/218 (14%)
Query: 397 IGTGSFGSVYKGTL----GDGTIVAIKVLK-LQQQGALKSFIDECNALKSTRHRNILRVI 451
IG G FG V++G VAIK K + F+ E ++ H +I+++I
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 452 TACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALD 511
+ + ++ E + G L +L Y S+I A +++AL
Sbjct: 78 GVITENPV------WIIMELCTLGELRSFLQ---VRKYSLDLASLIL---YAYQLSTALA 125
Query: 512 YLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGS- 570
YL H D+ NVL+ + +GDFGL++++ ++ T KG
Sbjct: 126 YLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM--------EDSTYYKASKGKL 174
Query: 571 -IGYIPPEHMN-GQVSILGDIYSYGILLLEMFT-GKRP 605
I ++ PE +N + + D++ +G+ + E+ G +P
Sbjct: 175 PIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP 212
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 91/219 (41%), Gaps = 40/219 (18%)
Query: 397 IGTGSFGSVYKG-TLGDGTIVAIKVLKLQQQGAL--KSFIDECNALKSTRHRNI---LRV 450
+G+G++GSV G VA+K L Q + K E LK +H N+ L V
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 451 ITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASAL 510
T S++ E ND + ++ N +H QF + + L
Sbjct: 96 FTPARSLE-EFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF----------LIYQILRGL 144
Query: 511 DYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGS 570
Y+H I H DLKPSN+ +++D + DFGLA+ +D+ G +
Sbjct: 145 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARH----TDDE------MTGYVAT 191
Query: 571 IGYIPPE------HMNGQVSILGDIYSYGILLLEMFTGK 603
Y PE H N V DI+S G ++ E+ TG+
Sbjct: 192 RWYRAPEIMLNWMHYNQTV----DIWSVGCIMAELLTGR 226
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 112/273 (41%), Gaps = 51/273 (18%)
Query: 378 GMSYSDISKSTDNFSKE-----NLIGTGSFGSVYK----GTLGDGTIVAIKVLKLQQQGA 428
G S + +++ + E ++G G +G V++ G I A+KVLK
Sbjct: 1 GSSETSVNRGPEKIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLK------ 54
Query: 429 LKSFIDECNALKSTRH----RNILRVITACSSVDL----EGNDFKALVFEFMSNGNLDQW 480
K+ I K T H RNIL + VDL + L+ E++S G L
Sbjct: 55 -KAMI--VRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGEL--- 108
Query: 481 LHPSPAEHYQFKKLSVIQRLNIAI---DVASALDYLHHHCDTPIAHCDLKPSNVLLDKDM 537
Q ++ + +++ AL +LH I + DLKP N++L+
Sbjct: 109 -------FMQLEREGIFMEDTACFYLAEISMALGHLHQKG---IIYRDLKPENIMLNHQG 158
Query: 538 TAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPE-HMNGQVSILGDIYSYGILL 596
+ DFGL K I D TV+ G+I Y+ PE M + D +S G L+
Sbjct: 159 HVKLTDFGLCK--ESIHDG-----TVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALM 211
Query: 597 LEMFTGKRP-TGDMFKDDFSIHMFVSMALPDHV 628
+M TG P TG+ K + + LP ++
Sbjct: 212 YDMLTGAPPFTGENRKKTIDKILKCKLNLPPYL 244
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 99/221 (44%), Gaps = 34/221 (15%)
Query: 395 NLIGTGSFGSVYKGTL----GDGTIVAIKVLKLQQQGAL---KSFIDECNALKSTRHRNI 447
++G G FG VY+G G+ VA+K K + L + F+ E +K+ H +I
Sbjct: 18 RILGEGFFGEVYEGVYTNHKGEKINVAVKTCK--KDCTLDNKEKFMSEAVIMKNLDHPHI 75
Query: 448 LRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVA 507
+++I + ++ E G L +L + L V+ + ++ +
Sbjct: 76 VKLIGIIEE------EPTWIIMELYPYGELGHYLERNK------NSLKVLTLVLYSLQIC 123
Query: 508 SALDYLHH-HCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIG 566
A+ YL +C H D+ N+L+ +GDFGL+++ I D +V+
Sbjct: 124 KAMAYLESINC----VHRDIAVRNILVASPECVKLGDFGLSRY---IEDEDYYKASVT-- 174
Query: 567 LKGSIGYIPPEHMN-GQVSILGDIYSYGILLLEMFT-GKRP 605
+ I ++ PE +N + + D++ + + + E+ + GK+P
Sbjct: 175 -RLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQP 214
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 93/218 (42%), Gaps = 32/218 (14%)
Query: 397 IGTGSFGSVYKGTL----GDGTIVAIKVLK-LQQQGALKSFIDECNALKSTRHRNILRVI 451
IG G FG V++G VAIK K + F+ E ++ H +I+++I
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 452 TACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALD 511
+ + ++ E + G L +L Y S+I A +++AL
Sbjct: 81 GVITENPV------WIIMELCTLGELRSFLQ---VRKYSLDLASLIL---YAYQLSTALA 128
Query: 512 YLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGS- 570
YL H D+ NVL+ + +GDFGL++++ ++ T KG
Sbjct: 129 YLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM--------EDSTYYKASKGKL 177
Query: 571 -IGYIPPEHMN-GQVSILGDIYSYGILLLEMFT-GKRP 605
I ++ PE +N + + D++ +G+ + E+ G +P
Sbjct: 178 PIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP 215
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 93/218 (42%), Gaps = 32/218 (14%)
Query: 397 IGTGSFGSVYKGTL----GDGTIVAIKVLK-LQQQGALKSFIDECNALKSTRHRNILRVI 451
IG G FG V++G VAIK K + F+ E ++ H +I+++I
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 452 TACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALD 511
+ + ++ E + G L +L Y S+I A +++AL
Sbjct: 78 GVITENPV------WIIMELCTLGELRSFLQ---VRKYSLDLASLIL---YAYQLSTALA 125
Query: 512 YLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGS- 570
YL H D+ NVL+ + +GDFGL++++ ++ T KG
Sbjct: 126 YLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM--------EDSTYYKASKGKL 174
Query: 571 -IGYIPPEHMN-GQVSILGDIYSYGILLLEMFT-GKRP 605
I ++ PE +N + + D++ +G+ + E+ G +P
Sbjct: 175 PIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP 212
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 90/225 (40%), Gaps = 36/225 (16%)
Query: 389 DNFSKENLIGTGSFGSVYKGTLGD-GTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNI 447
D F + +GTGSFG V + G A+K+L Q+ LK N + I
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN------EKRI 115
Query: 448 LRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLN------ 501
L+ + V LE F F N NL + A F L I R
Sbjct: 116 LQAVNFPFLVKLE--------FSFKDNSNLYM-VMEYVAGGEMFSHLRRIGRFXEPHARF 166
Query: 502 IAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQ 561
A + +YLH + + DLKP N+L+D+ V DFG AK + +
Sbjct: 167 YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----------RVK 213
Query: 562 TVSIGLKGSIGYIPPE-HMNGQVSILGDIYSYGILLLEMFTGKRP 605
+ L G+ Y+ PE ++ + D ++ G+L+ EM G P
Sbjct: 214 GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 93/218 (42%), Gaps = 32/218 (14%)
Query: 397 IGTGSFGSVYKGTL----GDGTIVAIKVLK-LQQQGALKSFIDECNALKSTRHRNILRVI 451
IG G FG V++G VAIK K + F+ E ++ H +I+++I
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 452 TACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALD 511
+ + ++ E + G L +L Y S+I A +++AL
Sbjct: 75 GVITENPV------WIIMELCTLGELRSFLQ---VRKYSLDLASLIL---YAYQLSTALA 122
Query: 512 YLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGS- 570
YL H D+ NVL+ + +GDFGL++++ ++ T KG
Sbjct: 123 YLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM--------EDSTYYKASKGKL 171
Query: 571 -IGYIPPEHMN-GQVSILGDIYSYGILLLEMFT-GKRP 605
I ++ PE +N + + D++ +G+ + E+ G +P
Sbjct: 172 PIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP 209
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 90/225 (40%), Gaps = 36/225 (16%)
Query: 389 DNFSKENLIGTGSFGSVYKGTLGD-GTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNI 447
D F + +GTGSFG V + G A+K+L Q+ LK N + I
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN------EKRI 94
Query: 448 LRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLN------ 501
L+ + V LE F F N NL + A F L I R
Sbjct: 95 LQAVNFPFLVKLE--------FSFKDNSNLYM-VMEYVAGGEMFSHLRRIGRFXEPHARF 145
Query: 502 IAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQ 561
A + +YLH + + DLKP N+L+D+ V DFG AK + +
Sbjct: 146 YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----------RVK 192
Query: 562 TVSIGLKGSIGYIPPE-HMNGQVSILGDIYSYGILLLEMFTGKRP 605
+ L G+ Y+ PE ++ + D ++ G+L+ EM G P
Sbjct: 193 GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 90/225 (40%), Gaps = 36/225 (16%)
Query: 389 DNFSKENLIGTGSFGSVYKGTLGD-GTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNI 447
D F + +GTGSFG V + G A+K+L Q+ LK N + I
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN------EKRI 94
Query: 448 LRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLN------ 501
L+ + V LE F F N NL + A F L I R
Sbjct: 95 LQAVNFPFLVKLE--------FSFKDNSNLYM-VMEYVAGGEMFSHLRRIGRFXEPHARF 145
Query: 502 IAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQ 561
A + +YLH + + DLKP N+L+D+ V DFG AK + +
Sbjct: 146 YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----------RVK 192
Query: 562 TVSIGLKGSIGYIPPE-HMNGQVSILGDIYSYGILLLEMFTGKRP 605
+ L G+ Y+ PE ++ + D ++ G+L+ EM G P
Sbjct: 193 GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 90/225 (40%), Gaps = 36/225 (16%)
Query: 389 DNFSKENLIGTGSFGSVYKGTLGD-GTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNI 447
D F + +GTGSFG V + G A+K+L Q+ LK N + I
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN------EKRI 94
Query: 448 LRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLN------ 501
L+ + V LE F F N NL + A F L I R
Sbjct: 95 LQAVNFPFLVKLE--------FSFKDNSNLYM-VMEYVAGGEMFSHLRRIGRFXEPHARF 145
Query: 502 IAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQ 561
A + +YLH + + DLKP N+L+D+ V DFG AK + +
Sbjct: 146 YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----------RVK 192
Query: 562 TVSIGLKGSIGYIPPE-HMNGQVSILGDIYSYGILLLEMFTGKRP 605
+ L G+ Y+ PE ++ + D ++ G+L+ EM G P
Sbjct: 193 GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 60/110 (54%), Gaps = 15/110 (13%)
Query: 501 NIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKN 560
IA+ + AL++LH + H D+KPSNVL++ + DFG++ +L D+ +K+
Sbjct: 113 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLV---DDVAKD 167
Query: 561 QTVSIGLKGSIGYIPPEHMNGQV-----SILGDIYSYGILLLEMFTGKRP 605
+ G K Y+ PE +N ++ S+ DI+S GI ++E+ + P
Sbjct: 168 --IDAGCK---PYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFP 212
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 98/226 (43%), Gaps = 36/226 (15%)
Query: 390 NFSKENLIGTGSFGSVYKGTLGD-GTIVAIKVLKLQQQGALKSFIDECNALKSTRH---- 444
+F +IG GS+ V L I A+KV+K + L + ++ + +++ +H
Sbjct: 6 DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKE----LVNDDEDIDWVQTEKHVFEQ 61
Query: 445 -RNILRVITACSSVDLEGNDFKALVFEFMSNGNLD---QWLHPSPAEHYQFKKLSVIQRL 500
N ++ S E F V E+++ G+L Q P EH +F
Sbjct: 62 ASNHPFLVGLHSCFQTESRLF--FVIEYVNGGDLMFHMQRQRKLPEEHARF--------- 110
Query: 501 NIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKN 560
+ +++ AL+YLH I + DLK NVLLD + + D+G+ K D S
Sbjct: 111 -YSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSX- 165
Query: 561 QTVSIGLKGSIGYIPPEHMNGQ-VSILGDIYSYGILLLEMFTGKRP 605
G+ YI PE + G+ D ++ G+L+ EM G+ P
Sbjct: 166 ------FCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSP 205
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 99/221 (44%), Gaps = 34/221 (15%)
Query: 395 NLIGTGSFGSVYKGTL----GDGTIVAIKVLKLQQQGAL---KSFIDECNALKSTRHRNI 447
++G G FG VY+G G+ VA+K K + L + F+ E +K+ H +I
Sbjct: 14 RILGEGFFGEVYEGVYTNHKGEKINVAVKTCK--KDCTLDNKEKFMSEAVIMKNLDHPHI 71
Query: 448 LRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVA 507
+++I + ++ E G L +L + L V+ + ++ +
Sbjct: 72 VKLIGIIEE------EPTWIIMELYPYGELGHYLERNK------NSLKVLTLVLYSLQIC 119
Query: 508 SALDYLHH-HCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIG 566
A+ YL +C H D+ N+L+ +GDFGL+++ I D +V+
Sbjct: 120 KAMAYLESINC----VHRDIAVRNILVASPECVKLGDFGLSRY---IEDEDYYKASVT-- 170
Query: 567 LKGSIGYIPPEHMN-GQVSILGDIYSYGILLLEMFT-GKRP 605
+ I ++ PE +N + + D++ + + + E+ + GK+P
Sbjct: 171 -RLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQP 210
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 90/225 (40%), Gaps = 36/225 (16%)
Query: 389 DNFSKENLIGTGSFGSVYKGTLGD-GTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNI 447
D F + +GTGSFG V + G A+K+L Q+ LK N + I
Sbjct: 36 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN------EKRI 89
Query: 448 LRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLN------ 501
L+ + V LE F F N NL + A F L I R
Sbjct: 90 LQAVNFPFLVKLE--------FSFKDNSNLYM-VMEYVAGGEMFSHLRRIGRFXEPHARF 140
Query: 502 IAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQ 561
A + +YLH + + DLKP N+L+D+ V DFG AK + +
Sbjct: 141 YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----------RVK 187
Query: 562 TVSIGLKGSIGYIPPE-HMNGQVSILGDIYSYGILLLEMFTGKRP 605
+ L G+ Y+ PE ++ + D ++ G+L+ EM G P
Sbjct: 188 GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 232
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 98/226 (43%), Gaps = 36/226 (15%)
Query: 390 NFSKENLIGTGSFGSVYKGTLGD-GTIVAIKVLKLQQQGALKSFIDECNALKSTRH---- 444
+F +IG GS+ V L I A+KV+K + L + ++ + +++ +H
Sbjct: 10 DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKE----LVNDDEDIDWVQTEKHVFEQ 65
Query: 445 -RNILRVITACSSVDLEGNDFKALVFEFMSNGNLD---QWLHPSPAEHYQFKKLSVIQRL 500
N ++ S E F V E+++ G+L Q P EH +F
Sbjct: 66 ASNHPFLVGLHSCFQTESRLF--FVIEYVNGGDLMFHMQRQRKLPEEHARF--------- 114
Query: 501 NIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKN 560
+ +++ AL+YLH I + DLK NVLLD + + D+G+ K D S
Sbjct: 115 -YSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSX- 169
Query: 561 QTVSIGLKGSIGYIPPEHMNGQ-VSILGDIYSYGILLLEMFTGKRP 605
G+ YI PE + G+ D ++ G+L+ EM G+ P
Sbjct: 170 ------FCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSP 209
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 91/219 (41%), Gaps = 40/219 (18%)
Query: 397 IGTGSFGSVYKG-TLGDGTIVAIKVLKLQQQGAL--KSFIDECNALKSTRHRNI---LRV 450
+G+G++GSV G VA+K L Q + K E LK +H N+ L V
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 451 ITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASAL 510
T S++ E ND + ++ N +H QF + + L
Sbjct: 90 FTPARSLE-EFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF----------LIYQILRGL 138
Query: 511 DYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGS 570
Y+H I H DLKPSN+ +++D + D+GLA+ +D+ G +
Sbjct: 139 KYIH---SADIIHRDLKPSNLAVNEDCELKILDYGLARH----TDDE------MTGYVAT 185
Query: 571 IGYIPPE------HMNGQVSILGDIYSYGILLLEMFTGK 603
Y PE H N V DI+S G ++ E+ TG+
Sbjct: 186 RWYRAPEIMLNWMHYNQTV----DIWSVGCIMAELLTGR 220
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 90/225 (40%), Gaps = 36/225 (16%)
Query: 389 DNFSKENLIGTGSFGSVYKGTLGD-GTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNI 447
D F + +GTGSFG V + G A+K+L Q+ LK N + I
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN------EKRI 94
Query: 448 LRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLN------ 501
L+ + V LE F F N NL + A F L I R
Sbjct: 95 LQAVNFPFLVKLE--------FSFKDNSNLYM-VMEYVAGGEMFSHLRRIGRFAEPHARF 145
Query: 502 IAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQ 561
A + +YLH + + DLKP N+L+D+ V DFG AK + +
Sbjct: 146 YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----------RVK 192
Query: 562 TVSIGLKGSIGYIPPE-HMNGQVSILGDIYSYGILLLEMFTGKRP 605
+ L G+ Y+ PE ++ + D ++ G+L+ EM G P
Sbjct: 193 GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 99/226 (43%), Gaps = 28/226 (12%)
Query: 389 DNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVL--KLQQQGALKSFIDECNALKSTRHR 445
D + IG G++G V G VAIK + K + E LK +H
Sbjct: 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHD 113
Query: 446 NILRVITACSSVDLEGNDFKAL--VFEFMSNGNLDQWLH---PSPAEHYQFKKLSVIQRL 500
NI+ I + +FK++ V + M + +L Q +H P EH ++ +++
Sbjct: 114 NII-AIKDILRPTVPYGEFKSVYVVLDLMES-DLHQIIHSSQPLTLEHVRYFLYQLLR-- 169
Query: 501 NIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKN 560
L Y+H + H DLKPSN+L++++ +GDFG+A+ L +P+++
Sbjct: 170 --------GLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGL---CTSPAEH 215
Query: 561 QTVSIGLKGSIGYIPPEHMNG--QVSILGDIYSYGILLLEMFTGKR 604
Q + Y PE M + + D++S G + EM ++
Sbjct: 216 QYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 261
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 92/224 (41%), Gaps = 50/224 (22%)
Query: 397 IGTGSFGSV---YKGTLGDGTIVAIKVLKLQQQGAL--KSFIDECNALKSTRHRNI---L 448
+G+G++GSV Y L VA+K L Q + + E LK +H N+ L
Sbjct: 36 VGSGAYGSVCSAYDARLRQK--VAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 449 RVITACSSVDLEGNDF-KALVFEFMSNGNLDQWLHPSP--AEHYQFKKLSVIQRLNIAID 505
V T +S++ DF + + + +L+ + EH QF +
Sbjct: 94 DVFTPATSIE----DFSEVYLVTTLMGADLNNIVKSQALSDEHVQF----------LVYQ 139
Query: 506 VASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSI 565
+ L Y+H I H DLKPSNV +++D + DFGLA+ +
Sbjct: 140 LLRGLKYIH---SAGIIHRDLKPSNVAVNEDSELRILDFGLAR----------QADEEMT 186
Query: 566 GLKGSIGYIPPE------HMNGQVSILGDIYSYGILLLEMFTGK 603
G + Y PE H N V DI+S G ++ E+ GK
Sbjct: 187 GYVATRWYRAPEIMLNWMHYNQTV----DIWSVGCIMAELLQGK 226
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 95/221 (42%), Gaps = 44/221 (19%)
Query: 397 IGTGSFGSVYKG-TLGDGTIVAIKVLKLQQQGAL--KSFIDECNALKSTRHRNI---LRV 450
+G+G++GSV G VA+K L Q + K E LK +H N+ L V
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 451 ITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSP--AEHYQFKKLSVIQRLNIAIDVAS 508
T S++ E ND LV M +L+ + + +H QF + +
Sbjct: 86 FTPARSLE-EFNDV-YLVTHLM-GADLNNIVKCAKLTDDHVQF----------LIYQILR 132
Query: 509 ALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLK 568
L Y+H I H DLKPSN+ +++D + DFGLA+ +D+ G
Sbjct: 133 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARH----TDDE------MTGYV 179
Query: 569 GSIGYIPPE------HMNGQVSILGDIYSYGILLLEMFTGK 603
+ Y PE H N V DI+S G ++ E+ TG+
Sbjct: 180 ATRWYRAPEIMLNWMHYNQTV----DIWSVGCIMAELLTGR 216
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 92/217 (42%), Gaps = 31/217 (14%)
Query: 396 LIGTGSFGSVYKGTLGD------GTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILR 449
+G G F ++ + D G IV +L LK E +++ + HR++
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLL-------LKPHQREKMSMEISIHRSLAH 76
Query: 450 VITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASA 509
E NDF +V E +L + H + K L+ + +
Sbjct: 77 QHVVGFHGFFEDNDFVFVVLELCRRRSLLEL-------HKRRKALTEPEARYYLRQIVLG 129
Query: 510 LDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKG 569
YLH + + H DLK N+ L++D+ +GDFGLA ++ + + +T L G
Sbjct: 130 CQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLAT---KVEYDGERKKT----LCG 179
Query: 570 SIGYIPPEHMNGQ-VSILGDIYSYGILLLEMFTGKRP 605
+ YI PE ++ + S D++S G ++ + GK P
Sbjct: 180 TPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 216
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 95/220 (43%), Gaps = 36/220 (16%)
Query: 397 IGTGSFGSVYKGTL----GDGTIVAIKVLK-LQQQGALKSFIDECNALKSTRHRNILRVI 451
IG G FG V++G VAIK K + F+ E ++ H +I+++I
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 452 TACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSV--IQRLNIAIDVASA 509
+ + ++ E + G L +L Q +K S+ + A +++A
Sbjct: 458 GVITENPV------WIIMELCTLGELRSFL--------QVRKFSLDLASLILYAYQLSTA 503
Query: 510 LDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKG 569
L YL H D+ NVL+ + +GDFGL++++ ++ T KG
Sbjct: 504 LAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM--------EDSTYYKASKG 552
Query: 570 S--IGYIPPEHMN-GQVSILGDIYSYGILLLEMFT-GKRP 605
I ++ PE +N + + D++ +G+ + E+ G +P
Sbjct: 553 KLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP 592
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 106/236 (44%), Gaps = 45/236 (19%)
Query: 390 NFSKENL-----IGTGSFGSVYKGTLG-DGTIVAIKVLKLQQQGALKSFIDECNALKSTR 443
+F+ E+L IG G++GSV K G I+A+K ++S +DE +
Sbjct: 18 DFTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVK--------RIRSTVDEKEQKQLLM 69
Query: 444 HRNILRVITACSS-VDLEGNDFKA----LVFEFMSNGNLDQWLHPSPAEHYQFKKLS-VI 497
+++ + C V G F+ + E MS + D++ Y + L VI
Sbjct: 70 DLDVVMRSSDCPYIVQFYGALFREGDCWICMELMST-SFDKFYK------YVYSVLDDVI 122
Query: 498 QRL---NIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEIS 554
I + AL++L + I H D+KPSN+LLD+ + DFG++ ++
Sbjct: 123 PEEILGKITLATVKALNHLKENLK--IIHRDIKPSNILLDRSGNIKLCDFGISG---QLV 177
Query: 555 DNPSKNQTVSIGLKGSIGYIPPEHMNGQVSILG-----DIYSYGILLLEMFTGKRP 605
D+ +K + G Y+ PE ++ S G D++S GI L E+ TG+ P
Sbjct: 178 DSIAKTRDA-----GCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFP 228
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 91/225 (40%), Gaps = 36/225 (16%)
Query: 389 DNFSKENLIGTGSFGSVYKGTLGD-GTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNI 447
D F + +GTGSFG V + G A+K+L Q+ LK N + I
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN------EKRI 94
Query: 448 LRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLN------ 501
L+ + V LE F F N NL + A F L I R +
Sbjct: 95 LQAVNFPFLVKLE--------FSFKDNSNLYM-VMEYVAGGEMFSHLRRIGRFSEPHARF 145
Query: 502 IAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQ 561
A + +YLH + + DLKP N+++D+ V DFG AK + +
Sbjct: 146 YAAQIVLTFEYLH---SLDLIYRDLKPENLIIDQQGYIQVTDFGFAK----------RVK 192
Query: 562 TVSIGLKGSIGYIPPEHMNGQ-VSILGDIYSYGILLLEMFTGKRP 605
+ L G+ Y+ PE + + + D ++ G+L+ EM G P
Sbjct: 193 GRTWXLCGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 97/219 (44%), Gaps = 35/219 (15%)
Query: 395 NLIGTGSFGSVY--KGTLGDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRVIT 452
++G+G+F V+ K L G + A+K +K S +E LK +H NI+ +
Sbjct: 15 EVLGSGAFSEVFLVKQRLT-GKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLED 73
Query: 453 ACSSVDLEGNDFKALVFEFMSNGNL-DQWLHPSPAEHYQFKKLS-VIQRLNIAIDVASAL 510
E LV + +S G L D+ L Y K S VIQ+ V SA+
Sbjct: 74 I-----YESTTHYYLVMQLVSGGELFDRILERGV---YTEKDASLVIQQ------VLSAV 119
Query: 511 DYLHHHCDTPIAHCDLKPSNVLL---DKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGL 567
YLH + I H DLKP N+L +++ + DFGL+K +N +S
Sbjct: 120 KYLH---ENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKM--------EQNGIMSTAC 168
Query: 568 KGSIGYIPPEHMNGQ-VSILGDIYSYGILLLEMFTGKRP 605
G+ GY+ PE + + S D +S G++ + G P
Sbjct: 169 -GTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPP 206
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 92/217 (42%), Gaps = 31/217 (14%)
Query: 396 LIGTGSFGSVYKGTLGD------GTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILR 449
+G G F ++ + D G IV +L LK E +++ + HR++
Sbjct: 28 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLL-------LKPHQREKMSMEISIHRSLAH 80
Query: 450 VITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASA 509
E NDF +V E +L + H + K L+ + +
Sbjct: 81 QHVVGFHGFFEDNDFVFVVLELCRRRSLLEL-------HKRRKALTEPEARYYLRQIVLG 133
Query: 510 LDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKG 569
YLH + + H DLK N+ L++D+ +GDFGLA ++ + + +T L G
Sbjct: 134 CQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLAT---KVEYDGERKKT----LCG 183
Query: 570 SIGYIPPEHMNGQ-VSILGDIYSYGILLLEMFTGKRP 605
+ YI PE ++ + S D++S G ++ + GK P
Sbjct: 184 TPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 220
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 97/233 (41%), Gaps = 39/233 (16%)
Query: 388 TDNFSKENLIGTGSFGSVYK------GTLGDGTIVAIKVLKLQQQGALKSFIDECNALKS 441
TD + +G G+F V + G I+ K L + L+ C LK
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLK- 61
Query: 442 TRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLS-VIQRL 500
H NI+R+ S+ EG F LVF+ ++ G L + + E+Y S IQ++
Sbjct: 62 --HPNIVRLH---DSISEEG--FHYLVFDLVTGGELFEDI--VAREYYSEADASHCIQQI 112
Query: 501 NIAIDVASALDYLHHHCD-TPIAHCDLKPSNVLL---DKDMTAHVGDFGLAKFLFEISDN 556
+++ HC I H DLKP N+LL K + DFGLA E+
Sbjct: 113 LESVN----------HCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLA---IEVQG- 158
Query: 557 PSKNQTVSIGLKGSIGYIPPEHMNGQ-VSILGDIYSYGILLLEMFTGKRPTGD 608
+Q G G+ GY+ PE + D+++ G++L + G P D
Sbjct: 159 ---DQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWD 208
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 92/217 (42%), Gaps = 31/217 (14%)
Query: 396 LIGTGSFGSVYKGTLGD------GTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILR 449
+G G F ++ + D G IV +L LK E +++ + HR++
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLL-------LKPHQREKMSMEISIHRSLAH 76
Query: 450 VITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASA 509
E NDF +V E +L + H + K L+ + +
Sbjct: 77 QHVVGFHGFFEDNDFVFVVLELCRRRSLLEL-------HKRRKALTEPEARYYLRQIVLG 129
Query: 510 LDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKG 569
YLH + + H DLK N+ L++D+ +GDFGLA ++ + + +T L G
Sbjct: 130 CQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLAT---KVEYDGERKKT----LCG 179
Query: 570 SIGYIPPEHMNGQ-VSILGDIYSYGILLLEMFTGKRP 605
+ YI PE ++ + S D++S G ++ + GK P
Sbjct: 180 TPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 216
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 97/233 (41%), Gaps = 39/233 (16%)
Query: 388 TDNFSKENLIGTGSFGSVYK------GTLGDGTIVAIKVLKLQQQGALKSFIDECNALKS 441
TD + +G G+F V + G I+ K L + L+ C LK
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLK- 61
Query: 442 TRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLS-VIQRL 500
H NI+R+ S+ EG F LVF+ ++ G L + + E+Y S IQ++
Sbjct: 62 --HPNIVRLH---DSISEEG--FHYLVFDLVTGGELFEDI--VAREYYSEADASHCIQQI 112
Query: 501 NIAIDVASALDYLHHHCD-TPIAHCDLKPSNVLL---DKDMTAHVGDFGLAKFLFEISDN 556
+++ HC I H DLKP N+LL K + DFGLA E+
Sbjct: 113 LESVN----------HCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLA---IEVQG- 158
Query: 557 PSKNQTVSIGLKGSIGYIPPEHMNGQ-VSILGDIYSYGILLLEMFTGKRPTGD 608
+Q G G+ GY+ PE + D+++ G++L + G P D
Sbjct: 159 ---DQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWD 208
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 99/226 (43%), Gaps = 28/226 (12%)
Query: 389 DNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVL--KLQQQGALKSFIDECNALKSTRHR 445
D + IG G++G V G VAIK + K + E LK +H
Sbjct: 55 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHD 114
Query: 446 NILRVITACSSVDLEGNDFKAL--VFEFMSNGNLDQWLH---PSPAEHYQFKKLSVIQRL 500
NI+ I + +FK++ V + M + +L Q +H P EH ++ +++
Sbjct: 115 NII-AIKDILRPTVPYGEFKSVYVVLDLMES-DLHQIIHSSQPLTLEHVRYFLYQLLR-- 170
Query: 501 NIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKN 560
L Y+H + H DLKPSN+L++++ +GDFG+A+ L +P+++
Sbjct: 171 --------GLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGL---CTSPAEH 216
Query: 561 QTVSIGLKGSIGYIPPEHMNG--QVSILGDIYSYGILLLEMFTGKR 604
Q + Y PE M + + D++S G + EM ++
Sbjct: 217 QYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 262
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 91/225 (40%), Gaps = 36/225 (16%)
Query: 389 DNFSKENLIGTGSFGSVYKGTLGD-GTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNI 447
D F + +GTGSFG V + G A+K+L Q+ LK N + I
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN------EKRI 94
Query: 448 LRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLN------ 501
L+ + V LE F F N NL + A F L I R +
Sbjct: 95 LQAVNFPFLVKLE--------FSFKDNSNLYM-VMEYVAGGEMFSHLRRIGRFSEPHARF 145
Query: 502 IAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQ 561
A + +YLH + + DLKP N+L+D+ V DFG AK + +
Sbjct: 146 YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----------RVK 192
Query: 562 TVSIGLKGSIGYIPPE-HMNGQVSILGDIYSYGILLLEMFTGKRP 605
+ L G+ Y+ PE ++ + D ++ G+L+ +M G P
Sbjct: 193 GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAGYPP 237
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 99/222 (44%), Gaps = 32/222 (14%)
Query: 397 IGTGSFGSVYKGTLGD-GTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRVITACS 455
+G G+FG VYK + G + A KV++ + + L+ +I E L + H I++++ A
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 456 SVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKK-LSVIQRLNIAIDVASALDYLH 514
+G + ++ EF G +D A + + L+ Q + + AL++LH
Sbjct: 79 H---DGKLW--IMIEFCPGGAVD-------AIMLELDRGLTEPQIQVVCRQMLEALNFLH 126
Query: 515 HHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGL-AKFLFEISDNPSKNQTVSIGLKGSIGY 573
I H DLK NVL+ + + DFG+ AK L + S G+ +
Sbjct: 127 ---SKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDS--------FIGTPYW 175
Query: 574 IPPEHM------NGQVSILGDIYSYGILLLEMFTGKRPTGDM 609
+ PE + + DI+S GI L+EM + P ++
Sbjct: 176 MAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHEL 217
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 94/220 (42%), Gaps = 36/220 (16%)
Query: 397 IGTGSFGSVYKGTL----GDGTIVAIKVLK-LQQQGALKSFIDECNALKSTRHRNILRVI 451
IG G FG V++G VAIK K + F+ E ++ H +I+++I
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 452 TACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSV--IQRLNIAIDVASA 509
+ + ++ E + G L +L Q +K S+ + A +++A
Sbjct: 78 GVITENPV------WIIMELCTLGELRSFL--------QVRKFSLDLASLILYAYQLSTA 123
Query: 510 LDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKG 569
L YL H D+ NVL+ +GDFGL++++ ++ T KG
Sbjct: 124 LAYLE---SKRFVHRDIAARNVLVSATDCVKLGDFGLSRYM--------EDSTYYKASKG 172
Query: 570 S--IGYIPPEHMN-GQVSILGDIYSYGILLLEMFT-GKRP 605
I ++ PE +N + + D++ +G+ + E+ G +P
Sbjct: 173 KLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP 212
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 99/222 (44%), Gaps = 32/222 (14%)
Query: 397 IGTGSFGSVYKGTLGD-GTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRVITACS 455
+G G+FG VYK + G + A KV++ + + L+ +I E L + H I++++ A
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 456 SVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKK-LSVIQRLNIAIDVASALDYLH 514
+G + ++ EF G +D A + + L+ Q + + AL++LH
Sbjct: 87 H---DGKLW--IMIEFCPGGAVD-------AIMLELDRGLTEPQIQVVCRQMLEALNFLH 134
Query: 515 HHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGL-AKFLFEISDNPSKNQTVSIGLKGSIGY 573
I H DLK NVL+ + + DFG+ AK L + S G+ +
Sbjct: 135 ---SKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDS--------FIGTPYW 183
Query: 574 IPPEHM------NGQVSILGDIYSYGILLLEMFTGKRPTGDM 609
+ PE + + DI+S GI L+EM + P ++
Sbjct: 184 MAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHEL 225
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 92/224 (41%), Gaps = 50/224 (22%)
Query: 397 IGTGSFGSV---YKGTLGDGTIVAIKVLKLQQQGAL--KSFIDECNALKSTRHRNI---L 448
+G+G++GSV Y L VA+K L Q + + E LK +H N+ L
Sbjct: 28 VGSGAYGSVCSAYDARLRQK--VAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 85
Query: 449 RVITACSSVDLEGNDF-KALVFEFMSNGNLDQWLHPSPA--EHYQFKKLSVIQRLNIAID 505
V T +S++ DF + + + +L+ + EH QF +
Sbjct: 86 DVFTPATSIE----DFSEVYLVTTLMGADLNNIVKCQALSDEHVQF----------LVYQ 131
Query: 506 VASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSI 565
+ L Y+H I H DLKPSNV +++D + DFGLA+ +
Sbjct: 132 LLRGLKYIH---SAGIIHRDLKPSNVAVNEDCELRILDFGLAR----------QADEEMT 178
Query: 566 GLKGSIGYIPPE------HMNGQVSILGDIYSYGILLLEMFTGK 603
G + Y PE H N V DI+S G ++ E+ GK
Sbjct: 179 GYVATRWYRAPEIMLNWMHYNQTV----DIWSVGCIMAELLQGK 218
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 105/241 (43%), Gaps = 37/241 (15%)
Query: 378 GMSYSDISKSTDNFSKENLIGTGSFGSVYK-GTLGDGTIVAIKVLKLQQ-----QGALKS 431
GM K D + +G+G F V K G A K +K +Q +G +
Sbjct: 1 GMETFKQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCRE 60
Query: 432 FID-ECNALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQ 490
I+ E + L+ H NI+ + E L+ E +S G L +L Q
Sbjct: 61 EIEREVSILRQVLHPNIITLHDV-----YENRTDVVLILELVSGGELFDFL-------AQ 108
Query: 491 FKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNV-LLDKDM-TAHVG--DFGL 546
+ LS + + + ++YLH IAH DLKP N+ LLDK++ H+ DFGL
Sbjct: 109 KESLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165
Query: 547 AKFLFEISDNPS-KNQTVSIGLKGSIGYIPPEHMNGQ-VSILGDIYSYGILLLEMFTGKR 604
A EI D KN + G+ ++ PE +N + + + D++S G++ + +G
Sbjct: 166 AH---EIEDGVEFKN------IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 216
Query: 605 P 605
P
Sbjct: 217 P 217
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 94/220 (42%), Gaps = 36/220 (16%)
Query: 397 IGTGSFGSVYKGTL----GDGTIVAIKVLK-LQQQGALKSFIDECNALKSTRHRNILRVI 451
IG G FG V++G VAIK K + F+ E ++ H +I+++I
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 452 TACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSV--IQRLNIAIDVASA 509
+ + ++ E + G L +L Q +K S+ + A +++A
Sbjct: 458 GVITENPV------WIIMELCTLGELRSFL--------QVRKFSLDLASLILYAYQLSTA 503
Query: 510 LDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKG 569
L YL H D+ NVL+ +GDFGL++++ ++ T KG
Sbjct: 504 LAYLE---SKRFVHRDIAARNVLVSATDCVKLGDFGLSRYM--------EDSTYYKASKG 552
Query: 570 S--IGYIPPEHMN-GQVSILGDIYSYGILLLEMFT-GKRP 605
I ++ PE +N + + D++ +G+ + E+ G +P
Sbjct: 553 KLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP 592
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 101/231 (43%), Gaps = 38/231 (16%)
Query: 389 DNFSKENLIGTGSFGSVYKGTLGDG-TIVAIKVL---KLQQQGALKSFIDECNALKSTRH 444
++F +IG G+FG V L + + A+K+L ++ ++ F +E + L +
Sbjct: 74 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDS 133
Query: 445 RNILRVITACSSVDLEGNDFKALVFEFMSNGNL----DQWLHPSPAEHYQFKKLSVIQRL 500
+ I + A + ++ LV ++ G+L ++ P E +F + +
Sbjct: 134 KWITTLHYA-----FQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARF----YLAEM 184
Query: 501 NIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKN 560
IAID L Y+H D+KP N+L+D + + DFG L E + +
Sbjct: 185 VIAIDSVHQLHYVHR---------DIKPDNILMDMNGHIRLADFGSCLKLME---DGTVQ 232
Query: 561 QTVSIGLKGSIGYIPPEHMN------GQVSILGDIYSYGILLLEMFTGKRP 605
+V++ G+ YI PE + G+ D +S G+ + EM G+ P
Sbjct: 233 SSVAV---GTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETP 280
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 92/224 (41%), Gaps = 50/224 (22%)
Query: 397 IGTGSFGSV---YKGTLGDGTIVAIKVLKLQQQGAL--KSFIDECNALKSTRHRNI---L 448
+G+G++GSV Y L VA+K L Q + + E LK +H N+ L
Sbjct: 36 VGSGAYGSVCSAYDARLRQK--VAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 449 RVITACSSVDLEGNDF-KALVFEFMSNGNLDQWLHPSP--AEHYQFKKLSVIQRLNIAID 505
V T +S++ DF + + + +L+ + EH QF +
Sbjct: 94 DVFTPATSIE----DFSEVYLVTTLMGADLNNIVKCQALSDEHVQF----------LVYQ 139
Query: 506 VASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSI 565
+ L Y+H I H DLKPSNV +++D + DFGLA+ +
Sbjct: 140 LLRGLKYIH---SAGIIHRDLKPSNVAVNEDSELRILDFGLAR----------QADEEMT 186
Query: 566 GLKGSIGYIPPE------HMNGQVSILGDIYSYGILLLEMFTGK 603
G + Y PE H N V DI+S G ++ E+ GK
Sbjct: 187 GYVATRWYRAPEIMLNWMHYNQTV----DIWSVGCIMAELLQGK 226
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 102/231 (44%), Gaps = 38/231 (16%)
Query: 389 DNFSKENLIGTGSFGSVYKGTLGDGT-IVAIKVL---KLQQQGALKSFIDECNALKSTRH 444
++F +IG G+FG V + + I A+K+L ++ ++ F +E + L +
Sbjct: 74 EDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDC 133
Query: 445 RNILRVITACSSVDLEGNDFKALVFEFMSNGNL----DQWLHPSPAEHYQFKKLSVIQRL 500
+ I + A + + LV ++ G+L ++ P + +F I +
Sbjct: 134 QWITALHYA-----FQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARF----YIGEM 184
Query: 501 NIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKN 560
+AID L Y+H D+KP NVLLD + + DFG +++D+ +
Sbjct: 185 VLAIDSIHQLHYVHR---------DIKPDNVLLDVNGHIRLADFGSC---LKMNDDGTVQ 232
Query: 561 QTVSIGLKGSIGYIPPEHMNGQVSILG------DIYSYGILLLEMFTGKRP 605
+V++ G+ YI PE + +G D +S G+ + EM G+ P
Sbjct: 233 SSVAV---GTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETP 280
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 102/231 (44%), Gaps = 38/231 (16%)
Query: 389 DNFSKENLIGTGSFGSVYKGTLGDGT-IVAIKVL---KLQQQGALKSFIDECNALKSTRH 444
++F +IG G+FG V + + I A+K+L ++ ++ F +E + L +
Sbjct: 90 EDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDC 149
Query: 445 RNILRVITACSSVDLEGNDFKALVFEFMSNGNL----DQWLHPSPAEHYQFKKLSVIQRL 500
+ I + A + + LV ++ G+L ++ P + +F I +
Sbjct: 150 QWITALHYA-----FQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARF----YIGEM 200
Query: 501 NIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKN 560
+AID L Y+H D+KP NVLLD + + DFG +++D+ +
Sbjct: 201 VLAIDSIHQLHYVHR---------DIKPDNVLLDVNGHIRLADFGSC---LKMNDDGTVQ 248
Query: 561 QTVSIGLKGSIGYIPPEHMNGQVSILG------DIYSYGILLLEMFTGKRP 605
+V++ G+ YI PE + +G D +S G+ + EM G+ P
Sbjct: 249 SSVAV---GTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETP 296
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 78/170 (45%), Gaps = 28/170 (16%)
Query: 389 DNFSKENLIGTGSFGSVYKGTLG-DGTIVAIK-VLKL-QQQGALKSFIDECNALKSTRHR 445
D + +LIGTGS+G V + + +VAIK +L++ + K + E L H
Sbjct: 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHD 112
Query: 446 NILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKL----SVIQRLN 501
++++V+ D+E D +V E + FKKL + L+
Sbjct: 113 HVVKVLDIVIPKDVEKFDELYVVLEIADSD---------------FKKLFRTPVYLTELH 157
Query: 502 IAI---DVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAK 548
I ++ + Y+H I H DLKP+N L+++D + V DFGLA+
Sbjct: 158 IKTLLYNLLVGVKYVH---SAGILHRDLKPANCLVNQDCSVKVCDFGLAR 204
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 103/241 (42%), Gaps = 37/241 (15%)
Query: 378 GMSYSDISKSTDNFSKENLIGTGSFGSVYK-GTLGDGTIVAIKVLKLQQQGALKSFID-- 434
GM K D + +G+G F V K G A K +K +Q A + +
Sbjct: 1 GMEPFKQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSRE 60
Query: 435 ----ECNALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQ 490
E + L+ H N++ + E L+ E +S G L +L Q
Sbjct: 61 EIEREVSILRQVLHHNVITLHDV-----YENRTDVVLILELVSGGELFDFL-------AQ 108
Query: 491 FKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNV-LLDKDM-TAHVG--DFGL 546
+ LS + + + ++YLH IAH DLKP N+ LLDK++ H+ DFGL
Sbjct: 109 KESLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165
Query: 547 AKFLFEISDNPS-KNQTVSIGLKGSIGYIPPEHMNGQ-VSILGDIYSYGILLLEMFTGKR 604
A EI D KN + G+ ++ PE +N + + + D++S G++ + +G
Sbjct: 166 AH---EIEDGVEFKN------IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 216
Query: 605 P 605
P
Sbjct: 217 P 217
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 103/241 (42%), Gaps = 37/241 (15%)
Query: 378 GMSYSDISKSTDNFSKENLIGTGSFGSVYK-GTLGDGTIVAIKVLKLQQQGALKSFID-- 434
GM K D + +G+G F V K G A K +K +Q A + +
Sbjct: 1 GMEPFKQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSRE 60
Query: 435 ----ECNALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQ 490
E + L+ H N++ + E L+ E +S G L +L Q
Sbjct: 61 EIEREVSILRQVLHHNVITLHDV-----YENRTDVVLILELVSGGELFDFL-------AQ 108
Query: 491 FKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNV-LLDKDM-TAHVG--DFGL 546
+ LS + + + ++YLH IAH DLKP N+ LLDK++ H+ DFGL
Sbjct: 109 KESLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165
Query: 547 AKFLFEISDNPS-KNQTVSIGLKGSIGYIPPEHMNGQ-VSILGDIYSYGILLLEMFTGKR 604
A EI D KN + G+ ++ PE +N + + + D++S G++ + +G
Sbjct: 166 AH---EIEDGVEFKN------IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 216
Query: 605 P 605
P
Sbjct: 217 P 217
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 93/221 (42%), Gaps = 44/221 (19%)
Query: 397 IGTGSFGSVYKG-TLGDGTIVAIKVLKLQQQGAL--KSFIDECNALKSTRHRNI---LRV 450
+G+G++GSV G VA+K L Q + K E LK +H N+ L V
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 451 ITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSP--AEHYQFKKLSVIQRLNIAIDVAS 508
T S++ E ND LV M +L+ + +H QF + +
Sbjct: 90 FTPARSLE-EFNDV-YLVTHLM-GADLNNIVKSQKLTDDHVQF----------LIYQILR 136
Query: 509 ALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLK 568
L Y+H I H DLKPSN+ +++D + DFGL + +D+ G
Sbjct: 137 GLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLCRH----TDDE------MTGYV 183
Query: 569 GSIGYIPPE------HMNGQVSILGDIYSYGILLLEMFTGK 603
+ Y PE H N V DI+S G ++ E+ TG+
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTV----DIWSVGCIMAELLTGR 220
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 103/241 (42%), Gaps = 37/241 (15%)
Query: 378 GMSYSDISKSTDNFSKENLIGTGSFGSVYK-GTLGDGTIVAIKVLKLQQQGALKSFID-- 434
GM K D + +G+G F V K G A K +K +Q A + +
Sbjct: 1 GMEPFKQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSRE 60
Query: 435 ----ECNALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQ 490
E + L+ H N++ + E L+ E +S G L +L Q
Sbjct: 61 EIEREVSILRQVLHHNVITLHDV-----YENRTDVVLILELVSGGELFDFL-------AQ 108
Query: 491 FKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNV-LLDKDM-TAHVG--DFGL 546
+ LS + + + ++YLH IAH DLKP N+ LLDK++ H+ DFGL
Sbjct: 109 KESLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165
Query: 547 AKFLFEISDNPS-KNQTVSIGLKGSIGYIPPEHMNGQ-VSILGDIYSYGILLLEMFTGKR 604
A EI D KN + G+ ++ PE +N + + + D++S G++ + +G
Sbjct: 166 AH---EIEDGVEFKN------IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 216
Query: 605 P 605
P
Sbjct: 217 P 217
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 103/241 (42%), Gaps = 37/241 (15%)
Query: 378 GMSYSDISKSTDNFSKENLIGTGSFGSVYK-GTLGDGTIVAIKVLKLQQQGALKSFID-- 434
GM K D + +G+G F V K G A K +K +Q A + +
Sbjct: 1 GMEPFKQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSRE 60
Query: 435 ----ECNALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQ 490
E + L+ H N++ + E L+ E +S G L +L Q
Sbjct: 61 EIEREVSILRQVLHHNVITLHDV-----YENRTDVVLILELVSGGELFDFL-------AQ 108
Query: 491 FKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNV-LLDKDM-TAHVG--DFGL 546
+ LS + + + ++YLH IAH DLKP N+ LLDK++ H+ DFGL
Sbjct: 109 KESLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165
Query: 547 AKFLFEISDNPS-KNQTVSIGLKGSIGYIPPEHMNGQ-VSILGDIYSYGILLLEMFTGKR 604
A EI D KN + G+ ++ PE +N + + + D++S G++ + +G
Sbjct: 166 AH---EIEDGVEFKN------IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 216
Query: 605 P 605
P
Sbjct: 217 P 217
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 98/227 (43%), Gaps = 29/227 (12%)
Query: 385 SKSTDNFSKENLIGTGSFGSVYKGT-LGDGTIVAIKVLKLQQQGALKSFIDECNALK-ST 442
K D + ++LIG GSFG V K + VAIK++K ++ L E L+
Sbjct: 50 EKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIK-NKKAFLNQAQIEVRLLELMN 108
Query: 443 RHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNI 502
+H ++ + LVFE +S NL L + F+ +S+
Sbjct: 109 KHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSY-NLYDLLRNT-----NFRGVSLNLTRKF 162
Query: 503 AIDVASALDYLHHHCDTP---IAHCDLKPSNVLL--DKDMTAHVGDFGLAKFLFEISDNP 557
A + +AL +L TP I HCDLKP N+LL K + DFG + L
Sbjct: 163 AQQMCTALLFL----ATPELSIIHCDLKPENILLCNPKRXAIKIVDFGSSCQL------- 211
Query: 558 SKNQTVSIGLKGSIGYIPPEHMNGQVSILG-DIYSYGILLLEMFTGK 603
Q + ++ Y PE + G L D++S G +L+EM TG+
Sbjct: 212 --GQRIYQXIQSRF-YRSPEVLLGMPYDLAIDMWSLGCILVEMHTGE 255
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 103/241 (42%), Gaps = 37/241 (15%)
Query: 378 GMSYSDISKSTDNFSKENLIGTGSFGSVYK-GTLGDGTIVAIKVLKLQQQGALKSFID-- 434
GM K D + +G+G F V K G A K +K +Q A + +
Sbjct: 1 GMEPFKQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSRE 60
Query: 435 ----ECNALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQ 490
E + L+ H N++ + E L+ E +S G L +L Q
Sbjct: 61 EIEREVSILRQVLHHNVITLHDVY-----ENRTDVVLILELVSGGELFDFL-------AQ 108
Query: 491 FKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNV-LLDKDM-TAHVG--DFGL 546
+ LS + + + ++YLH IAH DLKP N+ LLDK++ H+ DFGL
Sbjct: 109 KESLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165
Query: 547 AKFLFEISDNPS-KNQTVSIGLKGSIGYIPPEHMNGQ-VSILGDIYSYGILLLEMFTGKR 604
A EI D KN + G+ ++ PE +N + + + D++S G++ + +G
Sbjct: 166 AH---EIEDGVEFKN------IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 216
Query: 605 P 605
P
Sbjct: 217 P 217
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 90/225 (40%), Gaps = 36/225 (16%)
Query: 389 DNFSKENLIGTGSFGSVYKGTLGD-GTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNI 447
D F + +GTGSFG V + G A+K+L Q+ LK N + I
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN------EKRI 94
Query: 448 LRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLN------ 501
L+ + V LE F F N NL + A F L I R +
Sbjct: 95 LQAVNFPFLVKLE--------FSFKDNSNLYM-VMEYVAGGEMFSHLRRIGRFSEPHARF 145
Query: 502 IAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQ 561
A + +YLH + + DLKP N+L+D+ V DFG AK + +
Sbjct: 146 YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----------RVK 192
Query: 562 TVSIGLKGSIGYIPPE-HMNGQVSILGDIYSYGILLLEMFTGKRP 605
+ L G+ Y+ P ++ + D ++ G+L+ EM G P
Sbjct: 193 GRTWXLCGTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 93/222 (41%), Gaps = 21/222 (9%)
Query: 386 KSTDNFSKENLIGTGSFGSVYKGT-LGDGTIVAIKVLKLQQQGALKSFIDECNALKSTRH 444
++ + + +G G F Y+ T + + A KV+ + LK E + + H
Sbjct: 39 RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVV--PKSMLLKPHQKEKMSTEIAIH 96
Query: 445 RNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAI 504
+++ E +DF +V E +L + H + K ++ +
Sbjct: 97 KSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLEL-------HKRRKAVTEPEARYFMR 149
Query: 505 DVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVS 564
+ YLH + + H DLK N+ L+ DM +GDFGLA +I + + +T
Sbjct: 150 QTIQGVQYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLAT---KIEFDGERKKT-- 201
Query: 565 IGLKGSIGYIPPEHMNGQ-VSILGDIYSYGILLLEMFTGKRP 605
L G+ YI PE + + S DI+S G +L + GK P
Sbjct: 202 --LCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPP 241
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 103/231 (44%), Gaps = 37/231 (16%)
Query: 390 NFSKENLIGTGSFGS-VYKGTLGDGTIVAIKVLKLQQQGALKSFID-ECNALK-STRHRN 446
+F ++++G G+ G+ VY+G + + ++L SF D E L+ S H N
Sbjct: 25 SFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILP-----ECFSFADREVQLLRESDEHPN 79
Query: 447 ILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDV 506
++R C+ D + F+ + E + L +++ H + ++++Q+
Sbjct: 80 VIRYF--CTEKDRQ---FQYIAIELCA-ATLQEYVEQKDFAHLGLEPITLLQQ------T 127
Query: 507 ASALDYLHHHCDTPIAHCDLKPSNVLLDK-----DMTAHVGDFGLAKFLFEISDNPSKNQ 561
S L +LH I H DLKP N+L+ + A + DFGL K L + S+
Sbjct: 128 TSGLAHLH---SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRS 184
Query: 562 TVSIGLKGSIGYIPPEHMNGQV----SILGDIYSYGILLLEMFT-GKRPTG 607
G+ G+ G+I PE ++ + DI+S G + + + G P G
Sbjct: 185 ----GVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFG 231
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 98/227 (43%), Gaps = 29/227 (12%)
Query: 385 SKSTDNFSKENLIGTGSFGSVYKGT-LGDGTIVAIKVLKLQQQGALKSFIDECNALK-ST 442
K D + ++LIG GSFG V K + VAIK++K ++ L E L+
Sbjct: 50 EKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIK-NKKAFLNQAQIEVRLLELMN 108
Query: 443 RHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNI 502
+H ++ + LVFE +S NL L + F+ +S+
Sbjct: 109 KHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSY-NLYDLLRNT-----NFRGVSLNLTRKF 162
Query: 503 AIDVASALDYLHHHCDTP---IAHCDLKPSNVLL--DKDMTAHVGDFGLAKFLFEISDNP 557
A + +AL +L TP I HCDLKP N+LL K + DFG + L
Sbjct: 163 AQQMCTALLFL----ATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL------- 211
Query: 558 SKNQTVSIGLKGSIGYIPPEHMNGQVSILG-DIYSYGILLLEMFTGK 603
Q + ++ Y PE + G L D++S G +L+EM TG+
Sbjct: 212 --GQRIYQXIQSRF-YRSPEVLLGMPYDLAIDMWSLGCILVEMHTGE 255
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 90/219 (41%), Gaps = 40/219 (18%)
Query: 397 IGTGSFGSVYKG-TLGDGTIVAIKVLKLQQQGAL--KSFIDECNALKSTRHRNI---LRV 450
+G+G++GSV G VA+K L Q + K E LK +H N+ L V
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 451 ITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASAL 510
T S++ E ND + ++ N +H QF + + L
Sbjct: 90 FTPARSLE-EFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF----------LIYQILRGL 138
Query: 511 DYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGS 570
Y+H I H DLKPSN+ +++D + DF LA+ +D+ G +
Sbjct: 139 KYIH---SADIIHRDLKPSNLAVNEDCELKILDFYLARH----TDDE------MTGYVAT 185
Query: 571 IGYIPPE------HMNGQVSILGDIYSYGILLLEMFTGK 603
Y PE H N V DI+S G ++ E+ TG+
Sbjct: 186 RWYRAPEIMLNWMHYNQTV----DIWSVGCIMAELLTGR 220
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 62/128 (48%), Gaps = 11/128 (8%)
Query: 500 LNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSK 559
++ + VA +++L H DL N+LL ++ + DFGLA+ +++ D K
Sbjct: 202 ISYSFQVARGMEFLSSR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRK 258
Query: 560 NQTVSIGLKGSIGYIPPEHMNGQV-SILGDIYSYGILLLEMFT--GKRPTGDMFKDDFSI 616
T + + ++ PE + ++ S D++SYG+LL E+F+ G G +DF
Sbjct: 259 GDT-----RLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGVQMDEDFCS 313
Query: 617 HMFVSMAL 624
+ M +
Sbjct: 314 RLREGMRM 321
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 98/227 (43%), Gaps = 29/227 (12%)
Query: 385 SKSTDNFSKENLIGTGSFGSVYKG-TLGDGTIVAIKVLKLQQQGALKSFIDECNALK-ST 442
K D + ++LIG GSFG V K + VAIK++K ++ L E L+
Sbjct: 31 EKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIK-NKKAFLNQAQIEVRLLELMN 89
Query: 443 RHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNI 502
+H ++ + LVFE +S NL L + F+ +S+
Sbjct: 90 KHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSY-NLYDLLRNT-----NFRGVSLNLTRKF 143
Query: 503 AIDVASALDYLHHHCDTP---IAHCDLKPSNVLL--DKDMTAHVGDFGLAKFLFEISDNP 557
A + +AL +L TP I HCDLKP N+LL K + DFG + L
Sbjct: 144 AQQMCTALLFL----ATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL------- 192
Query: 558 SKNQTVSIGLKGSIGYIPPEHMNGQVSILG-DIYSYGILLLEMFTGK 603
Q + ++ Y PE + G L D++S G +L+EM TG+
Sbjct: 193 --GQRIYQXIQSRF-YRSPEVLLGMPYDLAIDMWSLGCILVEMHTGE 236
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 90/219 (41%), Gaps = 40/219 (18%)
Query: 397 IGTGSFGSVYKG-TLGDGTIVAIKVLKLQQQGAL--KSFIDECNALKSTRHRNI---LRV 450
+G+G++GSV G VA+K L Q + K E LK +H N+ L V
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 451 ITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASAL 510
T S++ E ND + ++ N +H QF + + L
Sbjct: 90 FTPARSLE-EFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF----------LIYQILRGL 138
Query: 511 DYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGS 570
Y+H I H DLKPSN+ +++D + FGLA+ +D+ G +
Sbjct: 139 KYIH---SADIIHRDLKPSNLAVNEDCELKILGFGLARH----TDDE------MTGYVAT 185
Query: 571 IGYIPPE------HMNGQVSILGDIYSYGILLLEMFTGK 603
Y PE H N V DI+S G ++ E+ TG+
Sbjct: 186 RWYRAPEIMLNWMHYNQTV----DIWSVGCIMAELLTGR 220
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 95/235 (40%), Gaps = 51/235 (21%)
Query: 397 IGTGSFGSVYKGT-LGDGTIVAIKVLKLQQQGALKSFIDECNALKSTR----------HR 445
+G G++G V+K G +VA+K + +F + +A ++ R H
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKI-------FDAFQNSTDAQRTFREIMILTELSGHE 69
Query: 446 NILRVITACSSVDLEGNDFKA-LVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAI 504
NI+ ++ + ND LVF++M LH + L + + +
Sbjct: 70 NIVNLLNVLRA----DNDRDVYLVFDYMETD-----LHAVIRANI----LEPVHKQYVVY 116
Query: 505 DVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEI----------- 553
+ + YLH + H D+KPSN+LL+ + V DFGL++ I
Sbjct: 117 QLIKVIKYLH---SGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSI 173
Query: 554 ---SDNPSKNQTVSIGLKGSIGYIPPEHMNGQVSILG--DIYSYGILLLEMFTGK 603
++N +Q + + Y PE + G D++S G +L E+ GK
Sbjct: 174 NENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 91/217 (41%), Gaps = 31/217 (14%)
Query: 396 LIGTGSFGSVYKGTLGD------GTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILR 449
+G G F ++ + D G IV +L LK E +++ + HR++
Sbjct: 48 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLL-------LKPHQREKMSMEISIHRSLAH 100
Query: 450 VITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASA 509
E NDF +V E +L + H + K L+ + +
Sbjct: 101 QHVVGFHGFFEDNDFVFVVLELCRRRSLLEL-------HKRRKALTEPEARYYLRQIVLG 153
Query: 510 LDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKG 569
YLH + + H DLK N+ L++D+ +GDFGLA ++ + + + L G
Sbjct: 154 CQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLAT---KVEYDGERKKV----LCG 203
Query: 570 SIGYIPPEHMNGQ-VSILGDIYSYGILLLEMFTGKRP 605
+ YI PE ++ + S D++S G ++ + GK P
Sbjct: 204 TPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 240
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 91/217 (41%), Gaps = 31/217 (14%)
Query: 396 LIGTGSFGSVYKGTLGD------GTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILR 449
+G G F ++ + D G IV +L LK E +++ + HR++
Sbjct: 46 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLL-------LKPHQREKMSMEISIHRSLAH 98
Query: 450 VITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASA 509
E NDF +V E +L + H + K L+ + +
Sbjct: 99 QHVVGFHGFFEDNDFVFVVLELCRRRSLLEL-------HKRRKALTEPEARYYLRQIVLG 151
Query: 510 LDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKG 569
YLH + + H DLK N+ L++D+ +GDFGLA ++ + + + L G
Sbjct: 152 CQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLAT---KVEYDGERKKV----LCG 201
Query: 570 SIGYIPPEHMNGQ-VSILGDIYSYGILLLEMFTGKRP 605
+ YI PE ++ + S D++S G ++ + GK P
Sbjct: 202 TPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 238
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 90/219 (41%), Gaps = 40/219 (18%)
Query: 397 IGTGSFGSVYKG-TLGDGTIVAIKVLKLQQQGAL--KSFIDECNALKSTRHRNI---LRV 450
+G+G++GSV G VA+K L Q + K E LK +H N+ L V
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 451 ITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASAL 510
T S++ E ND + ++ N +H QF + + L
Sbjct: 90 FTPARSLE-EFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF----------LIYQILRGL 138
Query: 511 DYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGS 570
Y+H I H DLKPSN+ +++D + D GLA+ +D+ G +
Sbjct: 139 KYIH---SADIIHRDLKPSNLAVNEDCELKILDAGLARH----TDDE------MTGYVAT 185
Query: 571 IGYIPPE------HMNGQVSILGDIYSYGILLLEMFTGK 603
Y PE H N V DI+S G ++ E+ TG+
Sbjct: 186 RWYRAPEIMLNWMHYNQTV----DIWSVGCIMAELLTGR 220
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 95/232 (40%), Gaps = 44/232 (18%)
Query: 391 FSKENLIGTGSFGSVYKGT-LGDGTIVAIKVLKL---QQQGALKSFIDECNALKSTRHRN 446
FS IG GSFG+VY + + +VAIK + Q + I E L+ RH N
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 447 ILRVITACSSVDLEGNDFKALVFEFM--SNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAI 504
++ C + LV E+ S +L + +H P +Q + IA
Sbjct: 77 TIQY-RGCYLREHTA----WLVMEYCLGSASDLLE-VHKKP-----------LQEVEIAA 119
Query: 505 DVASALD---YLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQ 561
AL YLH H + H D+K N+LL + +GDFG A + N
Sbjct: 120 VTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIM------APANX 170
Query: 562 TVSIGLKGSIGYIPPEHM----NGQVSILGDIYSYGILLLEMFTGKRPTGDM 609
V G+ ++ PE + GQ D++S GI +E+ K P +M
Sbjct: 171 FV-----GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNM 217
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 95/217 (43%), Gaps = 23/217 (10%)
Query: 391 FSKENLIGTGSFGSVYKGTLGDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRV 450
++ +IG GSFG V++ L + VAIK K+ Q K+ E ++ +H N++ +
Sbjct: 42 YTNCKVIGNGSFGVVFQAKLVESDEVAIK--KVLQDKRFKN--RELQIMRIVKHPNVVDL 97
Query: 451 IT-ACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASA 509
S+ D + F LV E++ + HY K + L I + +
Sbjct: 98 KAFFYSNGDKKDEVFLNLVLEYVPETVYRA------SRHYA-KLKQTMPMLLIKLYMYQL 150
Query: 510 LDYLHHHCDTPIAHCDLKPSNVLLDKDM-TAHVGDFGLAKFLFEISDNPSKNQTVSIGLK 568
L L + I H D+KP N+LLD + DFG AK L I+ P ++
Sbjct: 151 LRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKIL--IAGEP------NVSXI 202
Query: 569 GSIGYIPPEHMNGQVSILG--DIYSYGILLLEMFTGK 603
S Y PE + G + DI+S G ++ E+ G+
Sbjct: 203 CSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 102/242 (42%), Gaps = 37/242 (15%)
Query: 377 SGMSYSDISKSTDNFSKENLIGTGSFGSVY----KGTLGDGTIVAIK-VLKLQQQGALKS 431
G + D + +++GTG+F V K T +VAIK + K +G S
Sbjct: 6 EGPRWKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRT---QKLVAIKCIAKEALEGKEGS 62
Query: 432 FIDECNALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNL-DQWLHPSPAEHYQ 490
+E L +H NI+ A + G L+ + +S G L D+ + Y
Sbjct: 63 MENEIAVLHKIKHPNIV----ALDDIYESGGHL-YLIMQLVSGGELFDRIVEKG---FYT 114
Query: 491 FKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVL---LDKDMTAHVGDFGLA 547
+ S + V A+ YLH D I H DLKP N+L LD+D + DFGL+
Sbjct: 115 ERDAS-----RLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLS 166
Query: 548 KFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNGQ-VSILGDIYSYGILLLEMFTGKRPT 606
K ++P + + G+ GY+ PE + + S D +S G++ + G P
Sbjct: 167 KM-----EDPGSVLSTAC---GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPF 218
Query: 607 GD 608
D
Sbjct: 219 YD 220
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 102/242 (42%), Gaps = 37/242 (15%)
Query: 377 SGMSYSDISKSTDNFSKENLIGTGSFGSVY----KGTLGDGTIVAIK-VLKLQQQGALKS 431
G + D + +++GTG+F V K T +VAIK + K +G S
Sbjct: 6 EGPRWKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRT---QKLVAIKCIAKEALEGKEGS 62
Query: 432 FIDECNALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNL-DQWLHPSPAEHYQ 490
+E L +H NI+ A + E L+ + +S G L D+ + Y
Sbjct: 63 MENEIAVLHKIKHPNIV----ALDDI-YESGGHLYLIMQLVSGGELFDRIVEKG---FYT 114
Query: 491 FKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVL---LDKDMTAHVGDFGLA 547
+ S + V A+ YLH D I H DLKP N+L LD+D + DFGL+
Sbjct: 115 ERDAS-----RLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLS 166
Query: 548 KFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNGQ-VSILGDIYSYGILLLEMFTGKRPT 606
K ++P + + G+ GY+ PE + + S D +S G++ + G P
Sbjct: 167 KM-----EDPGSVLSTAC---GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPF 218
Query: 607 GD 608
D
Sbjct: 219 YD 220
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 91/217 (41%), Gaps = 31/217 (14%)
Query: 396 LIGTGSFGSVYKGTLGD------GTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILR 449
+G G F ++ + D G IV +L LK E +++ + HR++
Sbjct: 22 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLL-------LKPHQREKMSMEISIHRSLAH 74
Query: 450 VITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASA 509
E NDF +V E +L + H + K L+ + +
Sbjct: 75 QHVVGFHGFFEDNDFVFVVLELCRRRSLLEL-------HKRRKALTEPEARYYLRQIVLG 127
Query: 510 LDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKG 569
YLH + + H DLK N+ L++D+ +GDFGLA ++ + + + L G
Sbjct: 128 CQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLAT---KVEYDGERKKV----LCG 177
Query: 570 SIGYIPPEHMNGQ-VSILGDIYSYGILLLEMFTGKRP 605
+ YI PE ++ + S D++S G ++ + GK P
Sbjct: 178 TPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 214
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 90/219 (41%), Gaps = 40/219 (18%)
Query: 397 IGTGSFGSVYKG-TLGDGTIVAIKVLKLQQQGAL--KSFIDECNALKSTRHRNI---LRV 450
+G+G++GSV G VA+K L Q + K E LK +H N+ L V
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 451 ITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASAL 510
T S++ E ND + ++ N +H QF + + L
Sbjct: 90 FTPARSLE-EFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF----------LIYQILRGL 138
Query: 511 DYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGS 570
Y+H I H DLKPSN+ +++D + D GLA+ +D+ G +
Sbjct: 139 KYIH---SADIIHRDLKPSNLAVNEDCELKILDRGLARH----TDDE------MTGYVAT 185
Query: 571 IGYIPPE------HMNGQVSILGDIYSYGILLLEMFTGK 603
Y PE H N V DI+S G ++ E+ TG+
Sbjct: 186 RWYRAPEIMLNWMHYNQTV----DIWSVGCIMAELLTGR 220
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/237 (20%), Positives = 98/237 (41%), Gaps = 41/237 (17%)
Query: 383 DISKSTDNFSKENLIGTGSFGSV----YKGTLGDGTIVAIKVLKLQQQGALKSFIDECNA 438
D+ +++ +IG G+FG V +K T + + ++ ++ F +E +
Sbjct: 68 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDI 127
Query: 439 LKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWL--HPSPAEHYQFKKLSV 496
+ ++++ A + + + +V E+M G+L + + P + +F V
Sbjct: 128 MAFANSPWVVQLFYA-----FQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEV 182
Query: 497 IQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDN 556
+ +A+D ++ ++H D+KP N+LLDK + DFG +
Sbjct: 183 V----LALDAIHSMGFIHR---------DVKPDNMLLDKSGHLKLADFGTCMKM------ 223
Query: 557 PSKNQTVSIGLKGSIG---YIPPEHM-----NGQVSILGDIYSYGILLLEMFTGKRP 605
N+ + ++G YI PE + +G D +S G+ L EM G P
Sbjct: 224 ---NKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 277
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 95/232 (40%), Gaps = 44/232 (18%)
Query: 391 FSKENLIGTGSFGSVYKGT-LGDGTIVAIKVLKL---QQQGALKSFIDECNALKSTRHRN 446
FS IG GSFG+VY + + +VAIK + Q + I E L+ RH N
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 447 ILRVITACSSVDLEGNDFKALVFEFM--SNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAI 504
++ C + LV E+ S +L + +H P +Q + IA
Sbjct: 116 TIQY-RGCYLREHTA----WLVMEYCLGSASDLLE-VHKKP-----------LQEVEIAA 158
Query: 505 DVASALD---YLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQ 561
AL YLH H + H D+K N+LL + +GDFG A + N
Sbjct: 159 VTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIM------APANX 209
Query: 562 TVSIGLKGSIGYIPPEHM----NGQVSILGDIYSYGILLLEMFTGKRPTGDM 609
V G+ ++ PE + GQ D++S GI +E+ K P +M
Sbjct: 210 FV-----GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNM 256
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/237 (20%), Positives = 98/237 (41%), Gaps = 41/237 (17%)
Query: 383 DISKSTDNFSKENLIGTGSFGSV----YKGTLGDGTIVAIKVLKLQQQGALKSFIDECNA 438
D+ +++ +IG G+FG V +K T + + ++ ++ F +E +
Sbjct: 68 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDI 127
Query: 439 LKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWL--HPSPAEHYQFKKLSV 496
+ ++++ A + + + +V E+M G+L + + P + +F V
Sbjct: 128 MAFANSPWVVQLFYA-----FQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEV 182
Query: 497 IQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDN 556
+ +A+D ++ ++H D+KP N+LLDK + DFG +
Sbjct: 183 V----LALDAIHSMGFIHR---------DVKPDNMLLDKSGHLKLADFGTCMKM------ 223
Query: 557 PSKNQTVSIGLKGSIG---YIPPEHM-----NGQVSILGDIYSYGILLLEMFTGKRP 605
N+ + ++G YI PE + +G D +S G+ L EM G P
Sbjct: 224 ---NKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 277
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/237 (20%), Positives = 98/237 (41%), Gaps = 41/237 (17%)
Query: 383 DISKSTDNFSKENLIGTGSFGSV----YKGTLGDGTIVAIKVLKLQQQGALKSFIDECNA 438
D+ +++ +IG G+FG V +K T + + ++ ++ F +E +
Sbjct: 63 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDI 122
Query: 439 LKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWL--HPSPAEHYQFKKLSV 496
+ ++++ A + + + +V E+M G+L + + P + +F V
Sbjct: 123 MAFANSPWVVQLFYA-----FQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEV 177
Query: 497 IQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDN 556
+ +A+D ++ ++H D+KP N+LLDK + DFG +
Sbjct: 178 V----LALDAIHSMGFIHR---------DVKPDNMLLDKSGHLKLADFGTCMKM------ 218
Query: 557 PSKNQTVSIGLKGSIG---YIPPEHM-----NGQVSILGDIYSYGILLLEMFTGKRP 605
N+ + ++G YI PE + +G D +S G+ L EM G P
Sbjct: 219 ---NKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 272
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 55/104 (52%), Gaps = 15/104 (14%)
Query: 501 NIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKN 560
IA+ + AL++LH + H D+KPSNVL++ DFG++ +L D+ +K+
Sbjct: 140 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKXCDFGISGYLV---DDVAKD 194
Query: 561 QTVSIGLKGSIGYIPPEHMNGQV-----SILGDIYSYGILLLEM 599
+ G K Y PE +N ++ S+ DI+S GI +E+
Sbjct: 195 --IDAGCK---PYXAPERINPELNQKGYSVKSDIWSLGITXIEL 233
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 91/222 (40%), Gaps = 21/222 (9%)
Query: 386 KSTDNFSKENLIGTGSFGSVYKGTLGD-GTIVAIKVLKLQQQGALKSFIDECNALKSTRH 444
++ + + +G G F Y+ T D + A KV+ + LK E + + H
Sbjct: 23 RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVV--PKSMLLKPHQKEKMSTEIAIH 80
Query: 445 RNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAI 504
+++ E +DF +V E +L + H + K ++ +
Sbjct: 81 KSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLEL-------HKRRKAVTEPEARYFMR 133
Query: 505 DVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVS 564
+ YLH + + H DLK N+ L+ DM +GDFGLA + E K+
Sbjct: 134 QTIQGVQYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKI-EFDGERKKD---- 185
Query: 565 IGLKGSIGYIPPEHMNGQ-VSILGDIYSYGILLLEMFTGKRP 605
L G+ YI PE + + S DI+S G +L + GK P
Sbjct: 186 --LCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPP 225
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 102/240 (42%), Gaps = 36/240 (15%)
Query: 371 PKEVRQ-SGMSYSDISKSTDNFSKENLIGTGSFGSVYKGT-LGDGTIVAIKVLKLQQQGA 428
P EV+Q S Y DI + +G+G+FG V++ G + K +
Sbjct: 41 PVEVKQGSVYDYYDILEE---------LGSGAFGVVHRCVEKATGRVFVAKFINTPYPLD 91
Query: 429 LKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEH 488
+ +E + + H ++ + A E L+ EF+S G L + AE
Sbjct: 92 KYTVKNEISIMNQLHHPKLINLHDA-----FEDKYEMVLILEFLSGGELFDRI---AAED 143
Query: 489 YQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLD--KDMTAHVGDFGL 546
Y+ + VI + A + L ++H H I H D+KP N++ + K + + DFGL
Sbjct: 144 YKMSEAEVINYMRQACE---GLKHMHEHS---IVHLDIKPENIMCETKKASSVKIIDFGL 197
Query: 547 AKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNGQ-VSILGDIYSYGILLLEMFTGKRP 605
A L NP + V+ + + PE ++ + V D+++ G+L + +G P
Sbjct: 198 ATKL-----NPDEIVKVTT---ATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSP 249
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 96/255 (37%), Gaps = 59/255 (23%)
Query: 397 IGTGSFGSVYKGTLGDGTIVAIKVLKLQQQGALKSF--------IDECNALKSTRHRNIL 448
IG GS+G V + AI+ +K+ + ++ E +K H NI
Sbjct: 34 IGQGSYGVVRVAI--ENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIA 91
Query: 449 RVITACSSVDLEGNDFKALVFEFMSNGNLDQWLH--------------------PSP--- 485
R+ E + LV E G+L L+ P P
Sbjct: 92 RLYEV-----YEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECN 146
Query: 486 ------AEHYQFKKLSVIQRL----NIAIDVASALDYLHHHCDTPIAHCDLKPSNVLL-- 533
+ H + L +QR NI + SAL YLH + I H D+KP N L
Sbjct: 147 EEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLH---NQGICHRDIKPENFLFST 203
Query: 534 DKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNGQVSILG---DIY 590
+K + DFGL+K +++++ T G+ ++ PE +N G D +
Sbjct: 204 NKSFEIKLVDFGLSKEFYKLNNGEYYGMTTK---AGTPYFVAPEVLNTTNESYGPKCDAW 260
Query: 591 SYGILLLEMFTGKRP 605
S G+LL + G P
Sbjct: 261 SAGVLLHLLLMGAVP 275
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 102/242 (42%), Gaps = 37/242 (15%)
Query: 377 SGMSYSDISKSTDNFSKENLIGTGSFGSVY----KGTLGDGTIVAIK-VLKLQQQGALKS 431
G + D + +++GTG+F V K T +VAIK + K +G S
Sbjct: 6 EGPRWKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRT---QKLVAIKCIAKKALEGKEGS 62
Query: 432 FIDECNALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNL-DQWLHPSPAEHYQ 490
+E L +H NI+ A + G L+ + +S G L D+ + Y
Sbjct: 63 MENEIAVLHKIKHPNIV----ALDDIYESGGHL-YLIMQLVSGGELFDRIVEKG---FYT 114
Query: 491 FKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVL---LDKDMTAHVGDFGLA 547
+ S + V A+ YLH D I H DLKP N+L LD+D + DFGL+
Sbjct: 115 ERDAS-----RLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLS 166
Query: 548 KFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNGQ-VSILGDIYSYGILLLEMFTGKRPT 606
K ++P + + G+ GY+ PE + + S D +S G++ + G P
Sbjct: 167 KM-----EDPGSVLSTAC---GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPF 218
Query: 607 GD 608
D
Sbjct: 219 YD 220
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 102/242 (42%), Gaps = 37/242 (15%)
Query: 377 SGMSYSDISKSTDNFSKENLIGTGSFGSVY----KGTLGDGTIVAIK-VLKLQQQGALKS 431
G + D + +++GTG+F V K T +VAIK + K +G S
Sbjct: 6 EGPRWKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRT---QKLVAIKCIAKEALEGKEGS 62
Query: 432 FIDECNALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNL-DQWLHPSPAEHYQ 490
+E L +H NI+ A + G L+ + +S G L D+ + Y
Sbjct: 63 MENEIAVLHKIKHPNIV----ALDDIYESGGHL-YLIMQLVSGGELFDRIVEKG---FYT 114
Query: 491 FKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVL---LDKDMTAHVGDFGLA 547
+ S + V A+ YLH D I H DLKP N+L LD+D + DFGL+
Sbjct: 115 ERDAS-----RLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLS 166
Query: 548 KFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNGQ-VSILGDIYSYGILLLEMFTGKRPT 606
K ++P + + G+ GY+ PE + + S D +S G++ + G P
Sbjct: 167 KM-----EDPGSVLSTAC---GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPF 218
Query: 607 GD 608
D
Sbjct: 219 YD 220
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 90/225 (40%), Gaps = 36/225 (16%)
Query: 389 DNFSKENLIGTGSFGSVYKGTLGD-GTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNI 447
D F + +GTGSFG V + G A+K+L Q+ LK N + I
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN------EKRI 94
Query: 448 LRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLN------ 501
L+ + V LE F F N NL + A F L I R +
Sbjct: 95 LQAVNFPFLVKLE--------FSFKDNSNLYM-VMEYVAGGEMFSHLRRIGRFSEPHARF 145
Query: 502 IAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQ 561
A + +YLH + + DLKP N+L+D+ V DFG AK + +
Sbjct: 146 YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----------RVK 192
Query: 562 TVSIGLKGSIGYIPPE-HMNGQVSILGDIYSYGILLLEMFTGKRP 605
+ L G+ + PE ++ + D ++ G+L+ EM G P
Sbjct: 193 GRTWXLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 91/222 (40%), Gaps = 21/222 (9%)
Query: 386 KSTDNFSKENLIGTGSFGSVYKGTLGD-GTIVAIKVLKLQQQGALKSFIDECNALKSTRH 444
++ + + +G G F Y+ T D + A KV+ + LK E + + H
Sbjct: 39 RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVV--PKSMLLKPHQKEKMSTEIAIH 96
Query: 445 RNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAI 504
+++ E +DF +V E +L + H + K ++ +
Sbjct: 97 KSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLEL-------HKRRKAVTEPEARYFMR 149
Query: 505 DVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVS 564
+ YLH + + H DLK N+ L+ DM +GDFGLA + E K+
Sbjct: 150 QTIQGVQYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKI-EFDGERKKD---- 201
Query: 565 IGLKGSIGYIPPEHMNGQ-VSILGDIYSYGILLLEMFTGKRP 605
L G+ YI PE + + S DI+S G +L + GK P
Sbjct: 202 --LCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPP 241
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 94/223 (42%), Gaps = 37/223 (16%)
Query: 397 IGTGSFGSVYK------GTLGDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRV 450
+G G+F V + G I+ K L + L+ C LK H NI+R+
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLK---HPNIVRL 86
Query: 451 ITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLS-VIQRLNIAIDVASA 509
S+ EG+ + L+F+ ++ G L + + E+Y S IQ++ A+
Sbjct: 87 H---DSISEEGHHY--LIFDLVTGGELFEDI--VAREYYSEADASHCIQQILEAV----- 134
Query: 510 LDYLHHHCDTPIAHCDLKPSNVLLD---KDMTAHVGDFGLAKFLFEISDNPSKNQTVSIG 566
LH H + H DLKP N+LL K + DFGLA E+ Q G
Sbjct: 135 ---LHCH-QMGVVHRDLKPENLLLASKLKGAAVKLADFGLA---IEVEG----EQQAWFG 183
Query: 567 LKGSIGYIPPEHMNGQ-VSILGDIYSYGILLLEMFTGKRPTGD 608
G+ GY+ PE + D+++ G++L + G P D
Sbjct: 184 FAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWD 226
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 90/219 (41%), Gaps = 40/219 (18%)
Query: 397 IGTGSFGSVYKG-TLGDGTIVAIKVLKLQQQGAL--KSFIDECNALKSTRHRNI---LRV 450
+G+G++GSV G VA+K L Q + K E LK +H N+ L V
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 451 ITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASAL 510
T S++ E ND + ++ N +H QF + + L
Sbjct: 90 FTPARSLE-EFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF----------LIYQILRGL 138
Query: 511 DYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGS 570
Y+H I H DLKPSN+ +++D + D GLA+ +D+ G +
Sbjct: 139 KYIH---SADIIHRDLKPSNLAVNEDCELKILDGGLARH----TDDE------MTGYVAT 185
Query: 571 IGYIPPE------HMNGQVSILGDIYSYGILLLEMFTGK 603
Y PE H N V DI+S G ++ E+ TG+
Sbjct: 186 RWYRAPEIMLNWMHYNQTV----DIWSVGCIMAELLTGR 220
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 84/216 (38%), Gaps = 29/216 (13%)
Query: 389 DNFSKENLIGTGSFGSVYK-GTLGDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNI 447
+F + + +G GS+G V+K + DG + A+K + + D L
Sbjct: 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVK----RSMSPFRGPKDRARKLAEVGSHEK 112
Query: 448 LRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQF--KKLSVIQRLNIAID 505
+ C ++ + L + G PS +H + L Q D
Sbjct: 113 VGQHPCCVRLEQAWEEGGILYLQTELCG-------PSLQQHCEAWGASLPEAQVWGYLRD 165
Query: 506 VASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSI 565
AL +LH + H D+KP+N+ L +GDFGL L E+ T
Sbjct: 166 TLLALAHLHSQG---LVHLDVKPANIFLGPRGRCKLGDFGL---LVELG-------TAGA 212
Query: 566 G--LKGSIGYIPPEHMNGQVSILGDIYSYGILLLEM 599
G +G Y+ PE + G D++S G+ +LE+
Sbjct: 213 GEVQEGDPRYMAPELLQGSYGTAADVFSLGLTILEV 248
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 91/223 (40%), Gaps = 23/223 (10%)
Query: 386 KSTDNFSKENLIGTGSFGSVYKGTLGD-GTIVAIKVLKLQQQGALKSFIDECNALKSTRH 444
++ + + +G G F Y+ T D + A KV+ + LK E + + H
Sbjct: 39 RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVV--PKSMLLKPHQKEKMSTEIAIH 96
Query: 445 RNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAI 504
+++ E +DF +V E +L + H + K ++ +
Sbjct: 97 KSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLEL-------HKRRKAVTEPEARYFMR 149
Query: 505 DVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLA-KFLFEISDNPSKNQTV 563
+ YLH + + H DLK N+ L+ DM +GDFGLA K F D K
Sbjct: 150 QTIQGVQYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEF---DGERKKX-- 201
Query: 564 SIGLKGSIGYIPPEHMNGQ-VSILGDIYSYGILLLEMFTGKRP 605
L G+ YI PE + + S DI+S G +L + GK P
Sbjct: 202 ---LCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPP 241
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 101/241 (41%), Gaps = 37/241 (15%)
Query: 379 MSYSDISKSTDNFSKENLIGTGSFGSVYK------GTLGDGTIVAIKVLKLQQQGALKSF 432
M+ ++ T+ + +G G+F V + G I+ K L + L+
Sbjct: 1 MATITCTRFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLERE 60
Query: 433 IDECNALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFK 492
C LK H NI+R+ S+ EG+ + L+F+ ++ G L + + E+Y
Sbjct: 61 ARICRLLK---HPNIVRLH---DSISEEGHHY--LIFDLVTGGELFEDI--VAREYYSEA 110
Query: 493 KLS-VIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLD---KDMTAHVGDFGLAK 548
S IQ++ A+ LH H + H +LKP N+LL K + DFGLA
Sbjct: 111 DASHCIQQILEAV--------LHCH-QMGVVHRNLKPENLLLASKLKGAAVKLADFGLA- 160
Query: 549 FLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNGQ-VSILGDIYSYGILLLEMFTGKRPTG 607
E+ Q G G+ GY+ PE + D+++ G++L + G P
Sbjct: 161 --IEVEG----EQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFW 214
Query: 608 D 608
D
Sbjct: 215 D 215
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 95/222 (42%), Gaps = 28/222 (12%)
Query: 387 STDNFSKENLIGTGSFGSVYKG-TLGDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHR 445
+ D++ +G G + V++ + + V +K+LK ++ +K I L+ +
Sbjct: 35 NQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKNKIKREIKILENLRGGPN- 93
Query: 446 NILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAID 505
+IT V + ALVFE ++N + Q ++ L+ +
Sbjct: 94 ----IITLADIVKDPVSRTPALVFEHVNNTDFKQ----------LYQTLTDYDIRFYMYE 139
Query: 506 VASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTA-HVGDFGLAKFLFEISDNPSKNQTVS 564
+ ALDY H I H D+KP NV++D + + D+GLA+F +P + V
Sbjct: 140 ILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFY-----HPGQEYNVR 191
Query: 565 IGLKGSIGYIPPEHMNGQVSILG-DIYSYGILLLEMFTGKRP 605
+ + G P ++ Q+ D++S G +L M K P
Sbjct: 192 VASRYFKG--PELLVDYQMYDYSLDMWSLGCMLASMIFRKEP 231
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 97/233 (41%), Gaps = 32/233 (13%)
Query: 388 TDNFSKENLIGTGSFGSVYK-GTLGDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRN 446
+D F E+ +G G+ VY+ G A+KVLK + K E L H N
Sbjct: 52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLK--KTVDKKIVRTEIGVLLRLSHPN 109
Query: 447 ILRVITACSSVDLEGNDFKALVFEFMSNGNL-DQWLHPSPAEHYQFKKLSVIQRLNIAID 505
I+++ E +LV E ++ G L D+ + +Y + + +
Sbjct: 110 IIKLKEI-----FETPTEISLVLELVTGGELFDRIVEKG---YYSERDAA-----DAVKQ 156
Query: 506 VASALDYLHHHCDTPIAHCDLKPSNVLLDK---DMTAHVGDFGLAKFLFEISDNPSKNQT 562
+ A+ YLH + I H DLKP N+L D + DFGL+K + ++Q
Sbjct: 157 ILEAVAYLH---ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIV--------EHQV 205
Query: 563 VSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDF 614
+ + G+ GY PE + G D++S GI+ + G P D D F
Sbjct: 206 LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQF 258
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 77/188 (40%), Gaps = 14/188 (7%)
Query: 377 SGMSYSDISKSTDNFSK-----ENLIGTGSFGSVYKGT-LGDGTIVAIKVLKLQQQGALK 430
SG SD T + ++ G F VY+ +G G A+K L ++ +
Sbjct: 11 SGRDQSDFVGQTVELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNR 70
Query: 431 SFIDE-CNALKSTRHRNILRVITACSSVDLEGNDFKA--LVFEFMSNGNLDQWLHPSPAE 487
+ I E C K + H NI++ +A S E + +A L+ + G L ++L +
Sbjct: 71 AIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESR 130
Query: 488 HYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLA 547
LS L I A+ ++H PI H DLK N+LL T + DFG A
Sbjct: 131 ----GPLSCDTVLKIFYQTCRAVQHMHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSA 185
Query: 548 KFLFEISD 555
+ D
Sbjct: 186 TTISHYPD 193
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 95/220 (43%), Gaps = 39/220 (17%)
Query: 395 NLIGTGSFGSVYKGTLGDGTI---VAIKVLK----LQQQGALKSFIDECNALKSTRHRNI 447
+IG GSFG V K D + VA+K+++ +Q A + I E L+ N
Sbjct: 103 KVIGKGSFGQVVKAY--DHKVHQHVALKMVRNEKRFHRQAAEEIRILE--HLRKQDKDNT 158
Query: 448 LRVITACSSVDLEGNDFK---ALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAI 504
+ VI LE F+ + FE +S NL + + + +F+ S+ A
Sbjct: 159 MNVIHM-----LENFTFRNHICMTFELLSM-NLYELIKKN-----KFQGFSLPLVRKFAH 207
Query: 505 DVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTA--HVGDFGLAKFLFEISDNPSKNQT 562
+ LD LH I HCDLKP N+LL + + V DFG + + ++Q
Sbjct: 208 SILQCLDALH---KNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCY---------EHQR 255
Query: 563 VSIGLKGSIGYIPPEHMNGQVSILGDIYSYGILLLEMFTG 602
V ++ P + + + D++S G +L E+ TG
Sbjct: 256 VYTXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 111/258 (43%), Gaps = 41/258 (15%)
Query: 397 IGTGSFGSVYKGTL-----GDGTI-VAIKVLK----LQQQGALKSFIDECNALKSTRHRN 446
+G G+FG V + T D + VA+K+LK L ++ AL S + + L + H N
Sbjct: 47 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN--HMN 104
Query: 447 ILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLH----------PSPA-EHYQFKKLS 495
I+ ++ AC+ + G ++ E+ G+L +L SPA L
Sbjct: 105 IVNLLGACT---IGGPTL--VITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALD 159
Query: 496 VIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISD 555
+ L+ + VA + +L H DL N+LL + DFGLA+ +I +
Sbjct: 160 LEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLAR---DIKN 213
Query: 556 NPSKNQTVSIGLKGSIGYIPPEHM-NGQVSILGDIYSYGILLLEMFT-GKRPTGDMFKDD 613
+ N V + + ++ PE + N + D++SYGI L E+F+ G P M D
Sbjct: 214 D--SNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS 271
Query: 614 FSIHMF---VSMALPDHV 628
M M P+H
Sbjct: 272 KFYKMIKEGFRMLSPEHA 289
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 95/220 (43%), Gaps = 39/220 (17%)
Query: 395 NLIGTGSFGSVYKGTLGDGTI---VAIKVLK----LQQQGALKSFIDECNALKSTRHRNI 447
+IG GSFG V K D + VA+K+++ +Q A + I E L+ N
Sbjct: 103 KVIGKGSFGQVVKAY--DHKVHQHVALKMVRNEKRFHRQAAEEIRILE--HLRKQDKDNT 158
Query: 448 LRVITACSSVDLEGNDFK---ALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAI 504
+ VI LE F+ + FE +S NL + + + +F+ S+ A
Sbjct: 159 MNVIHM-----LENFTFRNHICMTFELLSM-NLYELIKKN-----KFQGFSLPLVRKFAH 207
Query: 505 DVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTA--HVGDFGLAKFLFEISDNPSKNQT 562
+ LD LH I HCDLKP N+LL + + V DFG + + ++Q
Sbjct: 208 SILQCLDALH---KNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCY---------EHQR 255
Query: 563 VSIGLKGSIGYIPPEHMNGQVSILGDIYSYGILLLEMFTG 602
V ++ P + + + D++S G +L E+ TG
Sbjct: 256 VYTXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 111/258 (43%), Gaps = 41/258 (15%)
Query: 397 IGTGSFGSVYKGTL-----GDGTI-VAIKVLK----LQQQGALKSFIDECNALKSTRHRN 446
+G G+FG V + T D + VA+K+LK L ++ AL S + + L + H N
Sbjct: 31 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN--HMN 88
Query: 447 ILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLH----------PSPA-EHYQFKKLS 495
I+ ++ AC+ + G ++ E+ G+L +L SPA L
Sbjct: 89 IVNLLGACT---IGGPTL--VITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALD 143
Query: 496 VIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISD 555
+ L+ + VA + +L H DL N+LL + DFGLA+ +I +
Sbjct: 144 LEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLAR---DIKN 197
Query: 556 NPSKNQTVSIGLKGSIGYIPPEHM-NGQVSILGDIYSYGILLLEMFT-GKRPTGDMFKDD 613
+ N V + + ++ PE + N + D++SYGI L E+F+ G P M D
Sbjct: 198 D--SNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS 255
Query: 614 FSIHMF---VSMALPDHV 628
M M P+H
Sbjct: 256 KFYKMIKEGFRMLSPEHA 273
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 81/170 (47%), Gaps = 28/170 (16%)
Query: 389 DNFSKENLIGTGSFGSVY----KGTLGDGTIVAIKVLKLQQQGAL--KSFIDECNALKST 442
DN+ ++LIG GS+G VY K T + VAIK + + + K + E L
Sbjct: 26 DNYIIKHLIGRGSYGYVYLAYDKNTEKN---VAIKKVNRMFEDLIDCKRILREITILNRL 82
Query: 443 RHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSP----AEHYQFKKLSVIQ 498
+ I+R+ DL D +V E +++ +L + L +P EH +
Sbjct: 83 KSDYIIRLYDLIIPDDLLKFDELYIVLE-IADSDLKK-LFKTPIFLTEEHIK-------- 132
Query: 499 RLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAK 548
I ++ +++H ++ I H DLKP+N LL++D + V DFGLA+
Sbjct: 133 --TILYNLLLGENFIH---ESGIIHRDLKPANCLLNQDCSVKVCDFGLAR 177
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 111/258 (43%), Gaps = 41/258 (15%)
Query: 397 IGTGSFGSVYKGTL-----GDGTI-VAIKVLK----LQQQGALKSFIDECNALKSTRHRN 446
+G G+FG V + T D + VA+K+LK L ++ AL S + + L + H N
Sbjct: 49 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN--HMN 106
Query: 447 ILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLH----------PSPA-EHYQFKKLS 495
I+ ++ AC+ + G ++ E+ G+L +L SPA L
Sbjct: 107 IVNLLGACT---IGGPTL--VITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALD 161
Query: 496 VIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISD 555
+ L+ + VA + +L H DL N+LL + DFGLA+ +I +
Sbjct: 162 LEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLAR---DIKN 215
Query: 556 NPSKNQTVSIGLKGSIGYIPPEHM-NGQVSILGDIYSYGILLLEMFT-GKRPTGDMFKDD 613
+ N V + + ++ PE + N + D++SYGI L E+F+ G P M D
Sbjct: 216 D--SNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS 273
Query: 614 FSIHMF---VSMALPDHV 628
M M P+H
Sbjct: 274 KFYKMIKEGFRMLSPEHA 291
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 109/258 (42%), Gaps = 41/258 (15%)
Query: 397 IGTGSFGSVYKGTL-----GDGTI-VAIKVLK----LQQQGALKSFIDECNALKSTRHRN 446
+G G+FG V + T D + VA+K+LK L ++ AL S + + L + H N
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN--HMN 111
Query: 447 ILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLH----------PSPA-EHYQFKKLS 495
I+ ++ AC+ + G ++ E+ G+L +L SPA L
Sbjct: 112 IVNLLGACT---IGGPTL--VITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALD 166
Query: 496 VIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISD 555
+ L+ + VA + +L H DL N+LL + DFGLA+ + S
Sbjct: 167 LEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDS- 222
Query: 556 NPSKNQTVSIGLKGSIGYIPPEHM-NGQVSILGDIYSYGILLLEMFT-GKRPTGDMFKDD 613
N V + + ++ PE + N + D++SYGI L E+F+ G P M D
Sbjct: 223 ----NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS 278
Query: 614 FSIHMF---VSMALPDHV 628
M M P+H
Sbjct: 279 KFYKMIKEGFRMLSPEHA 296
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 111/258 (43%), Gaps = 41/258 (15%)
Query: 397 IGTGSFGSVYKGTL-----GDGTI-VAIKVLK----LQQQGALKSFIDECNALKSTRHRN 446
+G G+FG V + T D + VA+K+LK L ++ AL S + + L + H N
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN--HMN 111
Query: 447 ILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLH----------PSPA-EHYQFKKLS 495
I+ ++ AC+ + G ++ E+ G+L +L SPA L
Sbjct: 112 IVNLLGACT---IGGPTL--VITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALD 166
Query: 496 VIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISD 555
+ L+ + VA + +L H DL N+LL + DFGLA+ +I +
Sbjct: 167 LEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLAR---DIKN 220
Query: 556 NPSKNQTVSIGLKGSIGYIPPEHM-NGQVSILGDIYSYGILLLEMFT-GKRPTGDMFKDD 613
+ N V + + ++ PE + N + D++SYGI L E+F+ G P M D
Sbjct: 221 D--SNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS 278
Query: 614 FSIHMF---VSMALPDHV 628
M M P+H
Sbjct: 279 KFYKMIKEGFRMLSPEHA 296
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 91/221 (41%), Gaps = 26/221 (11%)
Query: 390 NFSKENLIGTGSFG---SVYKGTLGDGTIVAIK-VLKLQQQGALKSFIDECNALKSTRHR 445
+++ IG G++G S Y T VAIK + + Q + + E L RH
Sbjct: 44 RYTQLQYIGEGAYGMVSSAYDHV--RKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHE 101
Query: 446 NILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAID 505
N++ + + LE +V + M +L + L + ++LS
Sbjct: 102 NVIGIRDILRASTLEAMRDVYIVQDLMET-DLYKLL--------KSQQLSNDHICYFLYQ 152
Query: 506 VASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSI 565
+ L Y+H + H DLKPSN+L++ + DFGLA+ I+D +
Sbjct: 153 ILRGLKYIH---SANVLHRDLKPSNLLINTTCDLKICDFGLAR----IADPEHDHTGFLT 205
Query: 566 GLKGSIGYIPPEHM---NGQVSILGDIYSYGILLLEMFTGK 603
+ Y PE M G + DI+S G +L EM + +
Sbjct: 206 EXVATRWYRAPEIMLNSKGYTKSI-DIWSVGCILAEMLSNR 245
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 78/166 (46%), Gaps = 14/166 (8%)
Query: 386 KSTDNFSKENLIGTGSFGSVYKGTLGDGTI-VAIKVLKLQQQGAL--KSFIDECNALKST 442
K DN+ ++LIG GS+G VY + VAIK + + + K + E L
Sbjct: 25 KVPDNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRL 84
Query: 443 RHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNI 502
+ I+R+ DL D +V E +++ +L + L +P L+ I
Sbjct: 85 KSDYIIRLHDLIIPEDLLKFDELYIVLE-IADSDLKK-LFKTPIF------LTEQHVKTI 136
Query: 503 AIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAK 548
++ ++H ++ I H DLKP+N LL++D + + DFGLA+
Sbjct: 137 LYNLLLGEKFIH---ESGIIHRDLKPANCLLNQDCSVKICDFGLAR 179
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 51/100 (51%), Gaps = 9/100 (9%)
Query: 503 AIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQT 562
+ VA +++L H DL N+LL + + DFGLA+ +++ D K
Sbjct: 199 SFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 255
Query: 563 VSIGLKGSIGYIPPEHMNGQV-SILGDIYSYGILLLEMFT 601
+ + ++ PE + +V +I D++S+G+LL E+F+
Sbjct: 256 -----RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 290
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 51/100 (51%), Gaps = 9/100 (9%)
Query: 503 AIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQT 562
+ VA +++L H DL N+LL + + DFGLA+ +++ D K
Sbjct: 197 SFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 253
Query: 563 VSIGLKGSIGYIPPEHMNGQV-SILGDIYSYGILLLEMFT 601
+ + ++ PE + +V +I D++S+G+LL E+F+
Sbjct: 254 -----RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 288
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 88/222 (39%), Gaps = 28/222 (12%)
Query: 390 NFSKENLIGTGSFGSVYKGTLGDGTI-VAIK-VLKLQQQGALKSFIDECNALKSTRHRNI 447
++ + IG G++G V + VAIK + + Q + + E L RH NI
Sbjct: 44 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 103
Query: 448 LRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAI--- 504
+ + + +E LV M A+ Y+ K + +I
Sbjct: 104 IGINDIIRAPTIEQMKDVYLVTHLMG------------ADLYKLLKTQHLSNDHICYFLY 151
Query: 505 DVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVS 564
+ L Y+H + H DLKPSN+LL+ + DFGLA+ ++D +
Sbjct: 152 QILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLAR----VADPDHDHTGFL 204
Query: 565 IGLKGSIGYIPPEHM---NGQVSILGDIYSYGILLLEMFTGK 603
+ Y PE M G + DI+S G +L EM + +
Sbjct: 205 TEYVATRWYRAPEIMLNSKGYTKSI-DIWSVGCILAEMLSNR 245
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 92/231 (39%), Gaps = 48/231 (20%)
Query: 391 FSKENLIGTGSFGSVYKG--TLGDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNIL 448
++ + IG G++G V L + K+ + Q + + E L RH NI+
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 449 RV--ITACSSVD-----------LEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLS 495
+ I +++ +E + +K L + +SN ++ +L YQ
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICYFL-------YQ----- 136
Query: 496 VIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISD 555
+ L Y+H + H DLKPSN+LL+ + DFGLA+ ++D
Sbjct: 137 ----------ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLAR----VAD 179
Query: 556 NPSKNQTVSIGLKGSIGYIPPEHM---NGQVSILGDIYSYGILLLEMFTGK 603
+ + Y PE M G + DI+S G +L EM + +
Sbjct: 180 PDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSI-DIWSVGCILAEMLSNR 229
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 92/231 (39%), Gaps = 48/231 (20%)
Query: 391 FSKENLIGTGSFGSVYKG--TLGDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNIL 448
++ + IG G++G V L + K+ + Q + + E L RH NI+
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 82
Query: 449 RV--ITACSSVD-----------LEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLS 495
+ I +++ +E + +K L + +SN ++ +L YQ
Sbjct: 83 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL-------YQ----- 130
Query: 496 VIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISD 555
+ L Y+H + H DLKPSN+LL+ + DFGLA+ ++D
Sbjct: 131 ----------ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLAR----VAD 173
Query: 556 NPSKNQTVSIGLKGSIGYIPPEHM---NGQVSILGDIYSYGILLLEMFTGK 603
+ + Y PE M G + DI+S G +L EM + +
Sbjct: 174 PDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSI-DIWSVGCILAEMLSNR 223
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 99/236 (41%), Gaps = 47/236 (19%)
Query: 387 STDNFSKENLIGTGSFGSV----YKGTLGDGTIVAIKVL---KLQQQGALKSFIDECNAL 439
+++ +IG G+FG V +K + + A+K+L ++ ++ F +E + +
Sbjct: 73 KAEDYDVVKVIGRGAFGEVQLVRHKAS---QKVYAMKLLSKFEMIKRSDSAFFWEERDIM 129
Query: 440 KSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWL--HPSPAEHYQFKKLSVI 497
++++ A + + + +V E+M G+L + + P + +F V+
Sbjct: 130 AFANSPWVVQLFCA-----FQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVV 184
Query: 498 QRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNP 557
ALD +H + H D+KP N+LLDK + DFG +
Sbjct: 185 L----------ALDAIHS---MGLIHRDVKPDNMLLDKHGHLKLADFGTCMKM------- 224
Query: 558 SKNQTVSIGLKGSIG---YIPPEHM-----NGQVSILGDIYSYGILLLEMFTGKRP 605
++T + ++G YI PE + +G D +S G+ L EM G P
Sbjct: 225 --DETGMVHCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTP 278
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 93/218 (42%), Gaps = 34/218 (15%)
Query: 397 IGTGSFGSVYKGT-LGDGTIVAIKVLKLQQQ-GALKSFIDECNALKSTRHRNILRVITAC 454
+G G++G V VA+K++ +++ ++ E K H N+++
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 74
Query: 455 SSVDLEGNDFKALVFEFMSNGNLDQWLHP-----SPAEHYQFKKLSVIQRLNIAIDVASA 509
EGN + L E+ S G L + P P F +L +
Sbjct: 75 R----EGN-IQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL------------MAG 117
Query: 510 LDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKG 569
+ YLH I H D+KP N+LLD+ + DFGLA +F ++ + + + G
Sbjct: 118 VVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLAT-VFRYNN----RERLLNKMXG 169
Query: 570 SIGYIPPEHMNGQV--SILGDIYSYGILLLEMFTGKRP 605
++ Y+ PE + + + D++S GI+L M G+ P
Sbjct: 170 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 92/231 (39%), Gaps = 48/231 (20%)
Query: 391 FSKENLIGTGSFGSVYKG--TLGDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNIL 448
++ + IG G++G V L + K+ + Q + + E L RH NI+
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 89
Query: 449 RV--ITACSSVD-----------LEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLS 495
+ I +++ +E + +K L + +SN ++ +L YQ
Sbjct: 90 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL-------YQ----- 137
Query: 496 VIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISD 555
+ L Y+H + H DLKPSN+LL+ + DFGLA+ ++D
Sbjct: 138 ----------ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLAR----VAD 180
Query: 556 NPSKNQTVSIGLKGSIGYIPPEHM---NGQVSILGDIYSYGILLLEMFTGK 603
+ + Y PE M G + DI+S G +L EM + +
Sbjct: 181 PDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSI-DIWSVGCILAEMLSNR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 92/231 (39%), Gaps = 48/231 (20%)
Query: 391 FSKENLIGTGSFGSVYKG--TLGDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNIL 448
++ + IG G++G V L + K+ + Q + + E L RH NI+
Sbjct: 31 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 90
Query: 449 RV--ITACSSVD-----------LEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLS 495
+ I +++ +E + +K L + +SN ++ +L YQ
Sbjct: 91 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL-------YQ----- 138
Query: 496 VIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISD 555
+ L Y+H + H DLKPSN+LL+ + DFGLA+ ++D
Sbjct: 139 ----------ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLAR----VAD 181
Query: 556 NPSKNQTVSIGLKGSIGYIPPEHM---NGQVSILGDIYSYGILLLEMFTGK 603
+ + Y PE M G + DI+S G +L EM + +
Sbjct: 182 PDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSI-DIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 92/231 (39%), Gaps = 48/231 (20%)
Query: 391 FSKENLIGTGSFGSVYKG--TLGDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNIL 448
++ + IG G++G V L + K+ + Q + + E L RH NI+
Sbjct: 22 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 81
Query: 449 RV--ITACSSVD-----------LEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLS 495
+ I +++ +E + +K L + +SN ++ +L YQ
Sbjct: 82 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL-------YQ----- 129
Query: 496 VIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISD 555
+ L Y+H + H DLKPSN+LL+ + DFGLA+ ++D
Sbjct: 130 ----------ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLAR----VAD 172
Query: 556 NPSKNQTVSIGLKGSIGYIPPEHM---NGQVSILGDIYSYGILLLEMFTGK 603
+ + Y PE M G + DI+S G +L EM + +
Sbjct: 173 PDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSI-DIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 92/231 (39%), Gaps = 48/231 (20%)
Query: 391 FSKENLIGTGSFGSVYKG--TLGDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNIL 448
++ + IG G++G V L + K+ + Q + + E L RH NI+
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 449 RV--ITACSSVD-----------LEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLS 495
+ I +++ +E + +K L + +SN ++ +L YQ
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL-------YQ----- 136
Query: 496 VIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISD 555
+ L Y+H + H DLKPSN+LL+ + DFGLA+ ++D
Sbjct: 137 ----------ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLAR----VAD 179
Query: 556 NPSKNQTVSIGLKGSIGYIPPEHM---NGQVSILGDIYSYGILLLEMFTGK 603
+ + Y PE M G + DI+S G +L EM + +
Sbjct: 180 PDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSI-DIWSVGCILAEMLSNR 229
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 92/231 (39%), Gaps = 48/231 (20%)
Query: 391 FSKENLIGTGSFGSVYKG--TLGDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNIL 448
++ + IG G++G V L + K+ + Q + + E L RH NI+
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENII 88
Query: 449 RV--ITACSSVD-----------LEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLS 495
+ I +++ +E + +K L + +SN ++ +L YQ
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL-------YQ----- 136
Query: 496 VIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISD 555
+ L Y+H + H DLKPSN+LL+ + DFGLA+ ++D
Sbjct: 137 ----------ILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLAR----VAD 179
Query: 556 NPSKNQTVSIGLKGSIGYIPPEHM---NGQVSILGDIYSYGILLLEMFTGK 603
+ + Y PE M G + DI+S G +L EM + +
Sbjct: 180 PDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSI-DIWSVGCILAEMLSNR 229
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 92/231 (39%), Gaps = 48/231 (20%)
Query: 391 FSKENLIGTGSFGSVYKG--TLGDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNIL 448
++ + IG G++G V L + K+ + Q + + E L RH NI+
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 449 RV--ITACSSVD-----------LEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLS 495
+ I +++ +E + +K L + +SN ++ +L YQ
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL-------YQ----- 136
Query: 496 VIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISD 555
+ L Y+H + H DLKPSN+LL+ + DFGLA+ ++D
Sbjct: 137 ----------ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLAR----VAD 179
Query: 556 NPSKNQTVSIGLKGSIGYIPPEHM---NGQVSILGDIYSYGILLLEMFTGK 603
+ + Y PE M G + DI+S G +L EM + +
Sbjct: 180 PDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSI-DIWSVGCILAEMLSNR 229
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 51/100 (51%), Gaps = 9/100 (9%)
Query: 503 AIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQT 562
+ VA +++L H DL N+LL + + DFGLA+ +++ D K
Sbjct: 204 SFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 260
Query: 563 VSIGLKGSIGYIPPEHMNGQV-SILGDIYSYGILLLEMFT 601
+ + ++ PE + +V +I D++S+G+LL E+F+
Sbjct: 261 -----RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 295
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 51/100 (51%), Gaps = 9/100 (9%)
Query: 503 AIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQT 562
+ VA +++L H DL N+LL + + DFGLA+ +++ D K
Sbjct: 206 SFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 262
Query: 563 VSIGLKGSIGYIPPEHMNGQV-SILGDIYSYGILLLEMFT 601
+ + ++ PE + +V +I D++S+G+LL E+F+
Sbjct: 263 -----RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 297
>pdb|3M18|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R2.1 In Complex With Hen Egg Lysozyme
Length = 251
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 72/179 (40%), Gaps = 36/179 (20%)
Query: 170 SIPVSLSNASNLQVLDFAENGLTGTIPGNFGSLKDLVRLNFDQNELGSREIGDLNFLKFL 229
S+P + ++ + LD GL F L L LN D N+L + G + L
Sbjct: 28 SVPSGI--PADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDL--- 82
Query: 230 ANCTSLEVLGLARNSFGGEMPISIANLSTHLRRLTMGENLMHGNIPVXXXXXXXXXXXXX 289
T L LGLA N +P+ + + T L +L +G N +
Sbjct: 83 ---TELGTLGLANNQLA-SLPLGVFDHLTQLDKLYLGGNQLK------------------ 120
Query: 290 XXXXXXXSVPE-VIGRLNKLEGLGLNVNKFSGLIPSSLGNLTILTRLWMEENRLEGSIP 347
S+P V RL KL+ L LN N+ + + LT L L + N+L+ S+P
Sbjct: 121 -------SLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQ-SVP 171
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 92/231 (39%), Gaps = 48/231 (20%)
Query: 391 FSKENLIGTGSFGSVYKG--TLGDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNIL 448
++ + IG G++G V L + K+ + Q + + E L RH NI+
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 449 RV--ITACSSVD-----------LEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLS 495
+ I +++ +E + +K L + +SN ++ +L YQ
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL-------YQ----- 136
Query: 496 VIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISD 555
+ L Y+H + H DLKPSN+LL+ + DFGLA+ ++D
Sbjct: 137 ----------ILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLAR----VAD 179
Query: 556 NPSKNQTVSIGLKGSIGYIPPEHM---NGQVSILGDIYSYGILLLEMFTGK 603
+ + Y PE M G + DI+S G +L EM + +
Sbjct: 180 PDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSI-DIWSVGCILAEMLSNR 229
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 92/231 (39%), Gaps = 48/231 (20%)
Query: 391 FSKENLIGTGSFGSVYKG--TLGDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNIL 448
++ + IG G++G V L + K+ + Q + + E L RH NI+
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 82
Query: 449 RV--ITACSSVD-----------LEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLS 495
+ I +++ +E + +K L + +SN ++ +L YQ
Sbjct: 83 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL-------YQ----- 130
Query: 496 VIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISD 555
+ L Y+H + H DLKPSN+LL+ + DFGLA+ ++D
Sbjct: 131 ----------ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLAR----VAD 173
Query: 556 NPSKNQTVSIGLKGSIGYIPPEHM---NGQVSILGDIYSYGILLLEMFTGK 603
+ + Y PE M G + DI+S G +L EM + +
Sbjct: 174 PDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSI-DIWSVGCILAEMLSNR 223
>pdb|3M19|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R5.1
pdb|3M19|B Chain B, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R5.1
Length = 251
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 72/179 (40%), Gaps = 36/179 (20%)
Query: 170 SIPVSLSNASNLQVLDFAENGLTGTIPGNFGSLKDLVRLNFDQNELGSREIGDLNFLKFL 229
S+P + ++ + LD GL F L L LN D N+L + G + L
Sbjct: 28 SVPSGI--PADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDL--- 82
Query: 230 ANCTSLEVLGLARNSFGGEMPISIANLSTHLRRLTMGENLMHGNIPVXXXXXXXXXXXXX 289
T L LGLA N +P+ + + T L +L +G N +
Sbjct: 83 ---TELGTLGLANNQLA-SLPLGVFDHLTQLDKLYLGGNQLK------------------ 120
Query: 290 XXXXXXXSVPE-VIGRLNKLEGLGLNVNKFSGLIPSSLGNLTILTRLWMEENRLEGSIP 347
S+P V RL KL+ L LN N+ + + LT L L + N+L+ S+P
Sbjct: 121 -------SLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQ-SVP 171
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 92/219 (42%), Gaps = 31/219 (14%)
Query: 393 KENLIGTGSFGSVYKGTLGDG-TIVAIKVLKLQQQGALKSFIDECNALKSTR-HRNILRV 450
K+ +G GSF K A+K++ + + + E ALK H NI+++
Sbjct: 15 KDKPLGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQK---EITALKLCEGHPNIVKL 71
Query: 451 ITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASAL 510
LV E ++ G L + + +H+ + S I R + SA+
Sbjct: 72 HEV-----FHDQLHTFLVMELLNGGELFERI--KKKKHFSETEASYIMR-----KLVSAV 119
Query: 511 DYLHHHCDTPIAHCDLKPSNVLL---DKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGL 567
++H D + H DLKP N+L + ++ + DFG A+ P NQ +
Sbjct: 120 SHMH---DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARL------KPPDNQPLKTPC 170
Query: 568 KGSIGYIPPEHMNGQ-VSILGDIYSYGILLLEMFTGKRP 605
++ Y PE +N D++S G++L M +G+ P
Sbjct: 171 -FTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVP 208
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 91/227 (40%), Gaps = 46/227 (20%)
Query: 371 PKEVRQSGMSYSDISKSTDNFSKENLIGTGSFGSVYKGTLGD-GTIVAIKVLKLQ----- 424
PK V G++ + + + +S + +G+G+FG V+ + V +K +K +
Sbjct: 7 PKAVELEGLAACE-GEYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLED 65
Query: 425 ---QQGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWL 481
+ L E L H NI++V+ E F LV E +G LD +
Sbjct: 66 CWIEDPKLGKVTLEIAILSRVEHANIIKVLDI-----FENQGFFQLVMEKHGSG-LDLFA 119
Query: 482 ----HP---SPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLD 534
HP P Y F++L SA+ YL I H D+K N+++
Sbjct: 120 FIDRHPRLDEPLASYIFRQL------------VSAVGYLRLK---DIIHRDIKDENIVIA 164
Query: 535 KDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG 581
+D T + DFG A +L + + G+I Y PE + G
Sbjct: 165 EDFTIKLIDFGSAAYL--------ERGKLFYTFCGTIEYCAPEVLMG 203
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 93/218 (42%), Gaps = 34/218 (15%)
Query: 397 IGTGSFGSVYKGT-LGDGTIVAIKVLKLQQQ-GALKSFIDECNALKSTRHRNILRVITAC 454
+G G++G V VA+K++ +++ ++ E K H N+++
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 73
Query: 455 SSVDLEGNDFKALVFEFMSNGNLDQWLHP-----SPAEHYQFKKLSVIQRLNIAIDVASA 509
EGN + L E+ S G L + P P F +L +
Sbjct: 74 R----EGN-IQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL------------MAG 116
Query: 510 LDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKG 569
+ YLH I H D+KP N+LLD+ + DFGLA +F ++ + + + G
Sbjct: 117 VVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLAT-VFRYNN----RERLLNKMXG 168
Query: 570 SIGYIPPEHMNGQV--SILGDIYSYGILLLEMFTGKRP 605
++ Y+ PE + + + D++S GI+L M G+ P
Sbjct: 169 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 92/231 (39%), Gaps = 48/231 (20%)
Query: 391 FSKENLIGTGSFGSVYKG--TLGDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNIL 448
++ + IG G++G V L + K+ + Q + + E L RH NI+
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 449 RV--ITACSSVD-----------LEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLS 495
+ I +++ +E + +K L + +SN ++ +L YQ
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL-------YQ----- 136
Query: 496 VIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISD 555
+ L Y+H + H DLKPSN+LL+ + DFGLA+ ++D
Sbjct: 137 ----------ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLAR----VAD 179
Query: 556 NPSKNQTVSIGLKGSIGYIPPEHM---NGQVSILGDIYSYGILLLEMFTGK 603
+ + Y PE M G + DI+S G +L EM + +
Sbjct: 180 PDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSI-DIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 92/231 (39%), Gaps = 48/231 (20%)
Query: 391 FSKENLIGTGSFGSVYKG--TLGDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNIL 448
++ + IG G++G V L + K+ + Q + + E L RH NI+
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 89
Query: 449 RV--ITACSSVD-----------LEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLS 495
+ I +++ +E + +K L + +SN ++ +L YQ
Sbjct: 90 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL-------YQ----- 137
Query: 496 VIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISD 555
+ L Y+H + H DLKPSN+LL+ + DFGLA+ ++D
Sbjct: 138 ----------ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLAR----VAD 180
Query: 556 NPSKNQTVSIGLKGSIGYIPPEHM---NGQVSILGDIYSYGILLLEMFTGK 603
+ + Y PE M G + DI+S G +L EM + +
Sbjct: 181 PDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSI-DIWSVGCILAEMLSNR 230
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 89/215 (41%), Gaps = 26/215 (12%)
Query: 396 LIGTGSFGSVY-KGTLGDGTIVAIKVLK---LQQQGALKSFIDECNALKSTRHRNILRVI 451
++G GSFG V G + A+K+LK + Q ++ + E L L +
Sbjct: 27 VLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQL 86
Query: 452 TACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALD 511
+C + D V E+++ G+L + Q + + A ++A L
Sbjct: 87 HSC----FQTMDRLYFVMEYVNGGDLMYHIQ-------QVGRFKEPHAVFYAAEIAIGLF 135
Query: 512 YLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSI 571
+L I + DLK NV+LD + + DFG+ K +N T G+
Sbjct: 136 FLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCK------ENIWDGVTTKX-FCGTP 185
Query: 572 GYIPPEHMNGQ-VSILGDIYSYGILLLEMFTGKRP 605
YI PE + Q D +++G+LL EM G+ P
Sbjct: 186 DYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAP 220
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 93/218 (42%), Gaps = 34/218 (15%)
Query: 397 IGTGSFGSVYKGT-LGDGTIVAIKVLKLQQQ-GALKSFIDECNALKSTRHRNILRVITAC 454
+G G++G V VA+K++ +++ ++ E K H N+++
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 455 SSVDLEGNDFKALVFEFMSNGNLDQWLHP-----SPAEHYQFKKLSVIQRLNIAIDVASA 509
EGN + L E+ S G L + P P F +L +
Sbjct: 74 R----EGN-IQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL------------MAG 116
Query: 510 LDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKG 569
+ YLH I H D+KP N+LLD+ + DFGLA +F ++ + + + G
Sbjct: 117 VVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLAT-VFRYNN----RERLLNKMXG 168
Query: 570 SIGYIPPEHMNGQV--SILGDIYSYGILLLEMFTGKRP 605
++ Y+ PE + + + D++S GI+L M G+ P
Sbjct: 169 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 94/220 (42%), Gaps = 39/220 (17%)
Query: 395 NLIGTGSFGSVYKGTLGDGTI---VAIKVLK----LQQQGALKSFIDECNALKSTRHRNI 447
+IG G FG V K D + VA+K+++ +Q A + I E L+ N
Sbjct: 103 KVIGKGXFGQVVKAY--DHKVHQHVALKMVRNEKRFHRQAAEEIRILE--HLRKQDKDNT 158
Query: 448 LRVITACSSVDLEGNDFK---ALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAI 504
+ VI LE F+ + FE +S NL + + + +F+ S+ A
Sbjct: 159 MNVIHM-----LENFTFRNHICMTFELLSM-NLYELIKKN-----KFQGFSLPLVRKFAH 207
Query: 505 DVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTA--HVGDFGLAKFLFEISDNPSKNQT 562
+ LD LH I HCDLKP N+LL + + V DFG + + ++Q
Sbjct: 208 SILQCLDALH---KNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCY---------EHQR 255
Query: 563 VSIGLKGSIGYIPPEHMNGQVSILGDIYSYGILLLEMFTG 602
V ++ P + + + D++S G +L E+ TG
Sbjct: 256 VYXXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 98/236 (41%), Gaps = 22/236 (9%)
Query: 397 IGTGSFGSV-YKGTLGDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRVITACS 455
+G G F V L DG A+K + +Q + E + + H NILR++ C
Sbjct: 37 LGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYC- 95
Query: 456 SVDLEGNDFKA-LVFEFMSNGNLDQWLHPSPAEHYQFKK--LSVIQRLNIAIDVASALDY 512
+ G +A L+ F G L W + E + K L+ Q L + + + L+
Sbjct: 96 -LRERGAKHEAWLLLPFFKRGTL--W---NEIERLKDKGNFLTEDQILWLLLGICRGLEA 149
Query: 513 LHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFG---LAKFLFEISDNPSKNQTVSIGLKG 569
+H AH DLKP+N+LL + + D G A E S Q + +
Sbjct: 150 IH---AKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWA-AQRC 205
Query: 570 SIGYIPPEHMNGQVSIL----GDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVS 621
+I Y PE + Q + D++S G +L M G+ P +F+ S+ + V
Sbjct: 206 TISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQ 261
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 93/218 (42%), Gaps = 34/218 (15%)
Query: 397 IGTGSFGSVYKGT-LGDGTIVAIKVLKLQQQ-GALKSFIDECNALKSTRHRNILRVITAC 454
+G G++G V VA+K++ +++ ++ E K H N+++
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 455 SSVDLEGNDFKALVFEFMSNGNLDQWLHP-----SPAEHYQFKKLSVIQRLNIAIDVASA 509
EGN + L E+ S G L + P P F +L +
Sbjct: 74 R----EGN-IQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL------------MAG 116
Query: 510 LDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKG 569
+ YLH I H D+KP N+LLD+ + DFGLA +F ++ + + + G
Sbjct: 117 VVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLAT-VFRYNN----RERLLNKMXG 168
Query: 570 SIGYIPPEHMNGQV--SILGDIYSYGILLLEMFTGKRP 605
++ Y+ PE + + + D++S GI+L M G+ P
Sbjct: 169 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 95/231 (41%), Gaps = 48/231 (20%)
Query: 391 FSKENLIGTGSFGSVYKGTLGDGTI-VAIKVLK-LQQQGALKSFIDECNALKSTRHRNIL 448
++ + IG G++G V + VAIK + + Q + + E L + RH NI+
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENII 86
Query: 449 RV--ITACSSVD-----------LEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLS 495
+ I +++ +E + +K L + +SN ++ +L YQ
Sbjct: 87 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL-------YQ----- 134
Query: 496 VIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISD 555
+ L Y+H + H DLKPSN+LL+ + DFGLA+ ++D
Sbjct: 135 ----------ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLAR----VAD 177
Query: 556 NPSKNQTVSIGLKGSIGYIPPEHM---NGQVSILGDIYSYGILLLEMFTGK 603
+ + Y PE M G + DI+S G +L EM + +
Sbjct: 178 PDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSI-DIWSVGCILAEMLSNR 227
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 93/218 (42%), Gaps = 34/218 (15%)
Query: 397 IGTGSFGSVYKGT-LGDGTIVAIKVLKLQQQ-GALKSFIDECNALKSTRHRNILRVITAC 454
+G G++G V VA+K++ +++ ++ E K H N+++
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 455 SSVDLEGNDFKALVFEFMSNGNLDQWLHP-----SPAEHYQFKKLSVIQRLNIAIDVASA 509
EGN + L E+ S G L + P P F +L +
Sbjct: 74 R----EGN-IQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL------------MAG 116
Query: 510 LDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKG 569
+ YLH I H D+KP N+LLD+ + DFGLA +F ++ + + + G
Sbjct: 117 VVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLAT-VFRYNN----RERLLNKMXG 168
Query: 570 SIGYIPPEHMNGQV--SILGDIYSYGILLLEMFTGKRP 605
++ Y+ PE + + + D++S GI+L M G+ P
Sbjct: 169 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 92/232 (39%), Gaps = 43/232 (18%)
Query: 391 FSKENLIGTGSFGSVYKGTLGDGTIVAIK-----------VLKLQQQGALKSFIDECNAL 439
++ + I +GS+G+V G +G VAIK V L K + E L
Sbjct: 24 YTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLL 83
Query: 440 KSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHP-----SPAEHYQFKKL 494
H NIL + + LV E M +L Q +H SP +H Q+
Sbjct: 84 NHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRT-DLAQVIHDQRIVISP-QHIQYFMY 141
Query: 495 SVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEIS 554
++ L++ LH + + H DL P N+LL + + DF LA+
Sbjct: 142 HILLGLHV----------LH---EAGVVHRDLHPGNILLADNNDITICDFNLAR-----E 183
Query: 555 DNPSKNQTVSIGLKGSIGYIPPE---HMNGQVSILGDIYSYGILLLEMFTGK 603
D N+T + + Y PE G + L D++S G ++ EMF K
Sbjct: 184 DTADANKTHYVTHR---WYRAPELVMQFKG-FTKLVDMWSAGCVMAEMFNRK 231
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 94/231 (40%), Gaps = 48/231 (20%)
Query: 391 FSKENLIGTGSFGSVYKGTLGDGTI-VAIKVLK-LQQQGALKSFIDECNALKSTRHRNIL 448
++ + IG G++G V + VAIK + + Q + + E L RH NI+
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 449 RV--ITACSSVD-----------LEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLS 495
+ I +++ +E + +K L + +SN ++ +L YQ
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL-------YQ----- 132
Query: 496 VIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISD 555
+ L Y+H + H DLKPSN+LL+ + DFGLA+ ++D
Sbjct: 133 ----------ILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKIXDFGLAR----VAD 175
Query: 556 NPSKNQTVSIGLKGSIGYIPPEHM---NGQVSILGDIYSYGILLLEMFTGK 603
+ + Y PE M G + DI+S G +L EM + +
Sbjct: 176 PDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSI-DIWSVGCILAEMLSNR 225
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 90/226 (39%), Gaps = 56/226 (24%)
Query: 397 IGTGSFGSV---YKGTLGDGTIVAIKVLK--LQQQGALKSFIDECNALKSTRHRNI---L 448
IG+G+ G V Y L VAIK L Q Q K E +K H+NI L
Sbjct: 32 IGSGAQGIVVAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLL 89
Query: 449 RVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVAS 508
V T S++ E D +V E M + NL Q VIQ + + + S
Sbjct: 90 NVFTPQKSLE-EFQDV-YIVMELM-DANLSQ----------------VIQ-MELDHERMS 129
Query: 509 ALDY-----LHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTV 563
L Y + H I H DLKPSN+++ D T + DFGLA+ T
Sbjct: 130 YLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR-------------TA 176
Query: 564 SIGLKGSIGYIPPEHMNGQVSILG-------DIYSYGILLLEMFTG 602
+ Y+ + ILG DI+S G+++ EM G
Sbjct: 177 GTSFMMT-PYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 94/232 (40%), Gaps = 48/232 (20%)
Query: 390 NFSKENLIGTGSFGSVYKGTLGDGTI-VAIK-VLKLQQQGALKSFIDECNALKSTRHRNI 447
++ + IG G++G V + VAIK + + Q + + E L RH NI
Sbjct: 44 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 103
Query: 448 LRV--ITACSSVD-----------LEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKL 494
+ + I +++ +E + +K L + +SN ++ +L YQ
Sbjct: 104 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL-------YQ---- 152
Query: 495 SVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEIS 554
+ L Y+H + H DLKPSN+LL+ + DFGLA+ ++
Sbjct: 153 -----------ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLAR----VA 194
Query: 555 DNPSKNQTVSIGLKGSIGYIPPEHM---NGQVSILGDIYSYGILLLEMFTGK 603
D + + Y PE M G + DI+S G +L EM + +
Sbjct: 195 DPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSI-DIWSVGCILAEMLSNR 245
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 94/231 (40%), Gaps = 48/231 (20%)
Query: 391 FSKENLIGTGSFGSVYKGTLGDGTI-VAIKVLK-LQQQGALKSFIDECNALKSTRHRNIL 448
++ + IG G++G V + VAIK + + Q + + E L RH NI+
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 449 RV--ITACSSVD-----------LEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLS 495
+ I +++ +E + +K L + +SN ++ +L YQ
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL-------YQ----- 132
Query: 496 VIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISD 555
+ L Y+H + H DLKPSN+LL+ + DFGLA+ ++D
Sbjct: 133 ----------ILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLAR----VAD 175
Query: 556 NPSKNQTVSIGLKGSIGYIPPEHM---NGQVSILGDIYSYGILLLEMFTGK 603
+ + Y PE M G + DI+S G +L EM + +
Sbjct: 176 PDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSI-DIWSVGCILAEMLSNR 225
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 88/215 (40%), Gaps = 26/215 (12%)
Query: 396 LIGTGSFGSVY-KGTLGDGTIVAIKVLKLQ---QQGALKSFIDECNALKSTRHRNILRVI 451
++G GSFG V G + A+K+LK Q ++ + E L L +
Sbjct: 348 VLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQL 407
Query: 452 TACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALD 511
+C + D V E+++ G+L + Q + + A ++A L
Sbjct: 408 HSC----FQTMDRLYFVMEYVNGGDLMYHIQ-------QVGRFKEPHAVFYAAEIAIGLF 456
Query: 512 YLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSI 571
+L I + DLK NV+LD + + DFG+ K I D + G+
Sbjct: 457 FLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCK--ENIWDG-----VTTKXFCGTP 506
Query: 572 GYIPPEHMNGQ-VSILGDIYSYGILLLEMFTGKRP 605
YI PE + Q D +++G+LL EM G+ P
Sbjct: 507 DYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAP 541
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 95/231 (41%), Gaps = 48/231 (20%)
Query: 391 FSKENLIGTGSFGSVYKGTLGDGTI-VAIKVLK-LQQQGALKSFIDECNALKSTRHRNIL 448
++ + IG G++G V + VAIK + + Q + + E L + RH NI+
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENII 86
Query: 449 RV--ITACSSVD-----------LEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLS 495
+ I +++ +E + +K L + +SN ++ +L YQ
Sbjct: 87 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL-------YQ----- 134
Query: 496 VIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISD 555
+ L Y+H + H DLKPSN+LL+ + DFGLA+ ++D
Sbjct: 135 ----------ILRGLKYIH---SANVLHRDLKPSNLLLNTTSDLKICDFGLAR----VAD 177
Query: 556 NPSKNQTVSIGLKGSIGYIPPEHM---NGQVSILGDIYSYGILLLEMFTGK 603
+ + Y PE M G + DI+S G +L EM + +
Sbjct: 178 PDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSI-DIWSVGCILAEMLSNR 227
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 92/232 (39%), Gaps = 43/232 (18%)
Query: 391 FSKENLIGTGSFGSVYKGTLGDGTIVAIK-----------VLKLQQQGALKSFIDECNAL 439
++ + I +GS+G+V G +G VAIK V L K + E L
Sbjct: 24 YTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLL 83
Query: 440 KSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHP-----SPAEHYQFKKL 494
H NIL + + LV E M +L Q +H SP +H Q+
Sbjct: 84 NHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRT-DLAQVIHDQRIVISP-QHIQYFMY 141
Query: 495 SVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEIS 554
++ L++ LH + + H DL P N+LL + + DF LA+
Sbjct: 142 HILLGLHV----------LH---EAGVVHRDLHPGNILLADNNDITICDFNLAR-----E 183
Query: 555 DNPSKNQTVSIGLKGSIGYIPPE---HMNGQVSILGDIYSYGILLLEMFTGK 603
D N+T + + Y PE G + L D++S G ++ EMF K
Sbjct: 184 DTADANKTHYVTHR---WYRAPELVMQFKG-FTKLVDMWSAGCVMAEMFNRK 231
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 94/231 (40%), Gaps = 48/231 (20%)
Query: 391 FSKENLIGTGSFGSVYKGTLGDGTI-VAIKVLK-LQQQGALKSFIDECNALKSTRHRNIL 448
++ + IG G++G V + VAIK + + Q + + E L RH NI+
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 449 RV--ITACSSVD-----------LEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLS 495
+ I +++ +E + +K L + +SN ++ +L YQ
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL-------YQ----- 132
Query: 496 VIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISD 555
+ L Y+H + H DLKPSN+LL+ + DFGLA+ ++D
Sbjct: 133 ----------ILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLAR----VAD 175
Query: 556 NPSKNQTVSIGLKGSIGYIPPEHM---NGQVSILGDIYSYGILLLEMFTGK 603
+ + Y PE M G + DI+S G +L EM + +
Sbjct: 176 PDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSI-DIWSVGCILAEMLSNR 225
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 93/218 (42%), Gaps = 34/218 (15%)
Query: 397 IGTGSFGSVYKGT-LGDGTIVAIKVLKLQQQ-GALKSFIDECNALKSTRHRNILRVITAC 454
+G G++G V VA+K++ +++ ++ E K H N+++
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 73
Query: 455 SSVDLEGNDFKALVFEFMSNGNLDQWLHP-----SPAEHYQFKKLSVIQRLNIAIDVASA 509
EGN + L E+ S G L + P P F +L +
Sbjct: 74 R----EGN-IQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL------------MAG 116
Query: 510 LDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKG 569
+ YLH I H D+KP N+LLD+ + DFGLA +F ++ + + + G
Sbjct: 117 VVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLAT-VFRYNN----RERLLNKMCG 168
Query: 570 SIGYIPPEHMNGQV--SILGDIYSYGILLLEMFTGKRP 605
++ Y+ PE + + + D++S GI+L M G+ P
Sbjct: 169 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 94/231 (40%), Gaps = 48/231 (20%)
Query: 391 FSKENLIGTGSFGSVYKGTLGDGTI-VAIKVLK-LQQQGALKSFIDECNALKSTRHRNIL 448
++ + IG G++G V + VAIK + + Q + + E L RH NI+
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 449 RV--ITACSSVD-----------LEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLS 495
+ I +++ +E + +K L + +SN ++ +L YQ
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL-------YQ----- 132
Query: 496 VIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISD 555
+ L Y+H + H DLKPSN+LL+ + DFGLA+ ++D
Sbjct: 133 ----------ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLAR----VAD 175
Query: 556 NPSKNQTVSIGLKGSIGYIPPEHM---NGQVSILGDIYSYGILLLEMFTGK 603
+ + Y PE M G + DI+S G +L EM + +
Sbjct: 176 PDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSI-DIWSVGCILAEMLSNR 225
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 72/158 (45%), Gaps = 21/158 (13%)
Query: 397 IGTGSFGSV---YKGTLGDGTIVAIKVLK--LQQQGALKSFIDECNALKSTRHRNILRVI 451
IG+G+ G V + LG VA+K L Q Q K E LK H+NI+ ++
Sbjct: 30 IGSGAQGIVCAAFDTVLGIN--VAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLL 87
Query: 452 TACS-SVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASAL 510
+ LE LV E M + NL Q +H +H + L + Q L +
Sbjct: 88 NVFTPQKTLEEFQDVYLVMELM-DANLCQVIH-MELDHERMSYL-LYQML-------CGI 137
Query: 511 DYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAK 548
+LH I H DLKPSN+++ D T + DFGLA+
Sbjct: 138 KHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 172
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 90/226 (39%), Gaps = 56/226 (24%)
Query: 397 IGTGSFGSV---YKGTLGDGTIVAIKVLK--LQQQGALKSFIDECNALKSTRHRNI---L 448
IG+G+ G V Y L VAIK L Q Q K E +K H+NI L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLL 89
Query: 449 RVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVAS 508
V T S++ E D +V E M + NL Q VIQ + + + S
Sbjct: 90 NVFTPQKSLE-EFQDV-YIVMELM-DANLSQ----------------VIQ-MELDHERMS 129
Query: 509 ALDY-----LHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTV 563
L Y + H I H DLKPSN+++ D T + DFGLA+ T
Sbjct: 130 YLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR-------------TA 176
Query: 564 SIGLKGSIGYIPPEHMNGQVSILG-------DIYSYGILLLEMFTG 602
+ Y+ + ILG DI+S G+++ EM G
Sbjct: 177 GTSFMMT-PYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 94/231 (40%), Gaps = 48/231 (20%)
Query: 391 FSKENLIGTGSFGSVYKGTLGDGTI-VAIKVLK-LQQQGALKSFIDECNALKSTRHRNIL 448
++ + IG G++G V + VAIK + + Q + + E L RH NI+
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 86
Query: 449 RV--ITACSSVD-----------LEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLS 495
+ I +++ +E + +K L + +SN ++ +L YQ
Sbjct: 87 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL-------YQ----- 134
Query: 496 VIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISD 555
+ L Y+H + H DLKPSN+LL+ + DFGLA+ ++D
Sbjct: 135 ----------ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLAR----VAD 177
Query: 556 NPSKNQTVSIGLKGSIGYIPPEHM---NGQVSILGDIYSYGILLLEMFTGK 603
+ + Y PE M G + DI+S G +L EM + +
Sbjct: 178 PDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSI-DIWSVGCILAEMLSNR 227
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 93/218 (42%), Gaps = 34/218 (15%)
Query: 397 IGTGSFGSVYKGT-LGDGTIVAIKVLKLQQQ-GALKSFIDECNALKSTRHRNILRVITAC 454
+G G++G V VA+K++ +++ ++ E K H N+++
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 455 SSVDLEGNDFKALVFEFMSNGNLDQWLHP-----SPAEHYQFKKLSVIQRLNIAIDVASA 509
EGN + L E+ S G L + P P F +L +
Sbjct: 75 R----EGN-IQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL------------MAG 117
Query: 510 LDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKG 569
+ YLH I H D+KP N+LLD+ + DFGLA +F ++ + + + G
Sbjct: 118 VVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLAT-VFRYNN----RERLLNKMCG 169
Query: 570 SIGYIPPEHMNGQV--SILGDIYSYGILLLEMFTGKRP 605
++ Y+ PE + + + D++S GI+L M G+ P
Sbjct: 170 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 94/231 (40%), Gaps = 48/231 (20%)
Query: 391 FSKENLIGTGSFGSVYKGTLGDGTI-VAIKVLK-LQQQGALKSFIDECNALKSTRHRNIL 448
++ + IG G++G V + VAIK + + Q + + E L RH NI+
Sbjct: 33 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 92
Query: 449 RV--ITACSSVD-----------LEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLS 495
+ I +++ +E + +K L + +SN ++ +L YQ
Sbjct: 93 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL-------YQ----- 140
Query: 496 VIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISD 555
+ L Y+H + H DLKPSN+LL+ + DFGLA+ ++D
Sbjct: 141 ----------ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLAR----VAD 183
Query: 556 NPSKNQTVSIGLKGSIGYIPPEHM---NGQVSILGDIYSYGILLLEMFTGK 603
+ + Y PE M G + DI+S G +L EM + +
Sbjct: 184 PDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSI-DIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 94/231 (40%), Gaps = 48/231 (20%)
Query: 391 FSKENLIGTGSFGSVYKGTLGDGTI-VAIKVLK-LQQQGALKSFIDECNALKSTRHRNIL 448
++ + IG G++G V + VAIK + + Q + + E L RH NI+
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 449 RV--ITACSSVD-----------LEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLS 495
+ I +++ +E + +K L + +SN ++ +L YQ
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL-------YQ----- 132
Query: 496 VIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISD 555
+ L Y+H + H DLKPSN+LL+ + DFGLA+ ++D
Sbjct: 133 ----------ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLAR----VAD 175
Query: 556 NPSKNQTVSIGLKGSIGYIPPEHM---NGQVSILGDIYSYGILLLEMFTGK 603
+ + Y PE M G + DI+S G +L EM + +
Sbjct: 176 PDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSI-DIWSVGCILAEMLSNR 225
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 69/163 (42%), Gaps = 31/163 (19%)
Query: 397 IGTGSFGSV---YKGTLGDGTIVAIKVLK--LQQQGALKSFIDECNALKSTRHRNILRVI 451
IG+G+ G V Y L VAIK L Q Q K E +K H+NI+ ++
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLL 89
Query: 452 TACSSVD-LEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASAL 510
+ LE LV E M + NL Q VIQ + + + S L
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELM-DANLXQ----------------VIQ-MELDHERMSYL 131
Query: 511 DY-----LHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAK 548
Y + H I H DLKPSN+++ D T + DFGLA+
Sbjct: 132 LYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR 174
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 93/218 (42%), Gaps = 34/218 (15%)
Query: 397 IGTGSFGSVYKGT-LGDGTIVAIKVLKLQQQ-GALKSFIDECNALKSTRHRNILRVITAC 454
+G G++G V VA+K++ +++ ++ E K H N+++
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 455 SSVDLEGNDFKALVFEFMSNGNLDQWLHP-----SPAEHYQFKKLSVIQRLNIAIDVASA 509
EGN + L E+ S G L + P P F +L +
Sbjct: 74 R----EGN-IQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL------------MAG 116
Query: 510 LDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKG 569
+ YLH I H D+KP N+LLD+ + DFGLA +F ++ + + + G
Sbjct: 117 VVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLAT-VFRYNN----RERLLNKMCG 168
Query: 570 SIGYIPPEHMNGQV--SILGDIYSYGILLLEMFTGKRP 605
++ Y+ PE + + + D++S GI+L M G+ P
Sbjct: 169 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 72/158 (45%), Gaps = 21/158 (13%)
Query: 397 IGTGSFGSV---YKGTLGDGTIVAIKVLK--LQQQGALKSFIDECNALKSTRHRNILRVI 451
IG+G+ G V + LG VA+K L Q Q K E LK H+NI+ ++
Sbjct: 32 IGSGAQGIVCAAFDTVLGIN--VAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLL 89
Query: 452 TACS-SVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASAL 510
+ LE LV E M + NL Q +H +H + L + Q L +
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELM-DANLCQVIHME-LDHERMSYL-LYQML-------CGI 139
Query: 511 DYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAK 548
+LH I H DLKPSN+++ D T + DFGLA+
Sbjct: 140 KHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 93/218 (42%), Gaps = 34/218 (15%)
Query: 397 IGTGSFGSVYKGT-LGDGTIVAIKVLKLQQQ-GALKSFIDECNALKSTRHRNILRVITAC 454
+G G++G V VA+K++ +++ ++ E K H N+++
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 455 SSVDLEGNDFKALVFEFMSNGNLDQWLHP-----SPAEHYQFKKLSVIQRLNIAIDVASA 509
EGN + L E+ S G L + P P F +L +
Sbjct: 74 R----EGN-IQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL------------MAG 116
Query: 510 LDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKG 569
+ YLH I H D+KP N+LLD+ + DFGLA +F ++ + + + G
Sbjct: 117 VVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLAT-VFRYNN----RERLLNKMCG 168
Query: 570 SIGYIPPEHMNGQV--SILGDIYSYGILLLEMFTGKRP 605
++ Y+ PE + + + D++S GI+L M G+ P
Sbjct: 169 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 93/218 (42%), Gaps = 34/218 (15%)
Query: 397 IGTGSFGSVYKGT-LGDGTIVAIKVLKLQQQ-GALKSFIDECNALKSTRHRNILRVITAC 454
+G G++G V VA+K++ +++ ++ E K H N+++
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 455 SSVDLEGNDFKALVFEFMSNGNLDQWLHP-----SPAEHYQFKKLSVIQRLNIAIDVASA 509
EGN + L E+ S G L + P P F +L +
Sbjct: 74 R----EGN-IQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL------------MAG 116
Query: 510 LDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKG 569
+ YLH I H D+KP N+LLD+ + DFGLA +F ++ + + + G
Sbjct: 117 VVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLAT-VFRYNN----RERLLNKMCG 168
Query: 570 SIGYIPPEHMNGQV--SILGDIYSYGILLLEMFTGKRP 605
++ Y+ PE + + + D++S GI+L M G+ P
Sbjct: 169 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 93/218 (42%), Gaps = 34/218 (15%)
Query: 397 IGTGSFGSVYKGT-LGDGTIVAIKVLKLQQQ-GALKSFIDECNALKSTRHRNILRVITAC 454
+G G++G V VA+K++ +++ ++ E K H N+++
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH- 73
Query: 455 SSVDLEGNDFKALVFEFMSNGNLDQWLHP-----SPAEHYQFKKLSVIQRLNIAIDVASA 509
EGN + L E+ S G L + P P F +L +
Sbjct: 74 ---RREGN-IQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL------------MAG 117
Query: 510 LDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKG 569
+ YLH I H D+KP N+LLD+ + DFGLA +F ++ + + + G
Sbjct: 118 VVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLAT-VFRYNN----RERLLNKMCG 169
Query: 570 SIGYIPPEHMNGQV--SILGDIYSYGILLLEMFTGKRP 605
++ Y+ PE + + + D++S GI+L M G+ P
Sbjct: 170 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 93/218 (42%), Gaps = 34/218 (15%)
Query: 397 IGTGSFGSVYKGT-LGDGTIVAIKVLKLQQQ-GALKSFIDECNALKSTRHRNILRVITAC 454
+G G++G V VA+K++ +++ ++ E K H N+++
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH- 73
Query: 455 SSVDLEGNDFKALVFEFMSNGNLDQWLHP-----SPAEHYQFKKLSVIQRLNIAIDVASA 509
EGN + L E+ S G L + P P F +L +
Sbjct: 74 ---RREGN-IQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL------------MAG 117
Query: 510 LDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKG 569
+ YLH I H D+KP N+LLD+ + DFGLA +F ++ + + + G
Sbjct: 118 VVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLAT-VFRYNN----RERLLNKMCG 169
Query: 570 SIGYIPPEHMNGQV--SILGDIYSYGILLLEMFTGKRP 605
++ Y+ PE + + + D++S GI+L M G+ P
Sbjct: 170 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 93/218 (42%), Gaps = 34/218 (15%)
Query: 397 IGTGSFGSVYKGT-LGDGTIVAIKVLKLQQQ-GALKSFIDECNALKSTRHRNILRVITAC 454
+G G++G V VA+K++ +++ ++ E K H N+++
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH- 73
Query: 455 SSVDLEGNDFKALVFEFMSNGNLDQWLHP-----SPAEHYQFKKLSVIQRLNIAIDVASA 509
EGN + L E+ S G L + P P F +L +
Sbjct: 74 ---RREGN-IQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL------------MAG 117
Query: 510 LDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKG 569
+ YLH I H D+KP N+LLD+ + DFGLA +F ++ + + + G
Sbjct: 118 VVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLAT-VFRYNN----RERLLNKMCG 169
Query: 570 SIGYIPPEHMNGQV--SILGDIYSYGILLLEMFTGKRP 605
++ Y+ PE + + + D++S GI+L M G+ P
Sbjct: 170 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 93/218 (42%), Gaps = 34/218 (15%)
Query: 397 IGTGSFGSVYKGT-LGDGTIVAIKVLKLQQQ-GALKSFIDECNALKSTRHRNILRVITAC 454
+G G++G V VA+K++ +++ ++ E K H N+++
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 455 SSVDLEGNDFKALVFEFMSNGNLDQWLHP-----SPAEHYQFKKLSVIQRLNIAIDVASA 509
EGN + L E+ S G L + P P F +L +
Sbjct: 74 R----EGN-IQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL------------MAG 116
Query: 510 LDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKG 569
+ YLH I H D+KP N+LLD+ + DFGLA +F ++ + + + G
Sbjct: 117 VVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLAT-VFRYNN----RERLLNKMCG 168
Query: 570 SIGYIPPEHMNGQV--SILGDIYSYGILLLEMFTGKRP 605
++ Y+ PE + + + D++S GI+L M G+ P
Sbjct: 169 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 93/218 (42%), Gaps = 34/218 (15%)
Query: 397 IGTGSFGSVYKGT-LGDGTIVAIKVLKLQQQ-GALKSFIDECNALKSTRHRNILRVITAC 454
+G G++G V VA+K++ +++ ++ E K H N+++
Sbjct: 13 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 72
Query: 455 SSVDLEGNDFKALVFEFMSNGNLDQWLHP-----SPAEHYQFKKLSVIQRLNIAIDVASA 509
EGN + L E+ S G L + P P F +L +
Sbjct: 73 R----EGN-IQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL------------MAG 115
Query: 510 LDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKG 569
+ YLH I H D+KP N+LLD+ + DFGLA +F ++ + + + G
Sbjct: 116 VVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLAT-VFRYNN----RERLLNKMCG 167
Query: 570 SIGYIPPEHMNGQV--SILGDIYSYGILLLEMFTGKRP 605
++ Y+ PE + + + D++S GI+L M G+ P
Sbjct: 168 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 205
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 93/218 (42%), Gaps = 34/218 (15%)
Query: 397 IGTGSFGSVYKGT-LGDGTIVAIKVLKLQQQ-GALKSFIDECNALKSTRHRNILRVITAC 454
+G G++G V VA+K++ +++ ++ E K H N+++
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 455 SSVDLEGNDFKALVFEFMSNGNLDQWLHP-----SPAEHYQFKKLSVIQRLNIAIDVASA 509
EGN + L E+ S G L + P P F +L +
Sbjct: 74 R----EGN-IQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL------------MAG 116
Query: 510 LDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKG 569
+ YLH I H D+KP N+LLD+ + DFGLA +F ++ + + + G
Sbjct: 117 VVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLAT-VFRYNN----RERLLNKMCG 168
Query: 570 SIGYIPPEHMNGQV--SILGDIYSYGILLLEMFTGKRP 605
++ Y+ PE + + + D++S GI+L M G+ P
Sbjct: 169 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 93/218 (42%), Gaps = 34/218 (15%)
Query: 397 IGTGSFGSVYKGT-LGDGTIVAIKVLKLQQQ-GALKSFIDECNALKSTRHRNILRVITAC 454
+G G++G V VA+K++ +++ ++ E K H N+++
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 455 SSVDLEGNDFKALVFEFMSNGNLDQWLHP-----SPAEHYQFKKLSVIQRLNIAIDVASA 509
EGN + L E+ S G L + P P F +L +
Sbjct: 75 R----EGN-IQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL------------MAG 117
Query: 510 LDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKG 569
+ YLH I H D+KP N+LLD+ + DFGLA +F ++ + + + G
Sbjct: 118 VVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLAT-VFRYNN----RERLLNKMCG 169
Query: 570 SIGYIPPEHMNGQV--SILGDIYSYGILLLEMFTGKRP 605
++ Y+ PE + + + D++S GI+L M G+ P
Sbjct: 170 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 93/218 (42%), Gaps = 34/218 (15%)
Query: 397 IGTGSFGSVYKGT-LGDGTIVAIKVLKLQQQ-GALKSFIDECNALKSTRHRNILRVITAC 454
+G G++G V VA+K++ +++ ++ E K H N+++
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH- 73
Query: 455 SSVDLEGNDFKALVFEFMSNGNLDQWLHP-----SPAEHYQFKKLSVIQRLNIAIDVASA 509
EGN + L E+ S G L + P P F +L +
Sbjct: 74 ---RREGN-IQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL------------MAG 117
Query: 510 LDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKG 569
+ YLH I H D+KP N+LLD+ + DFGLA +F ++ + + + G
Sbjct: 118 VVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLAT-VFRYNN----RERLLNKMCG 169
Query: 570 SIGYIPPEHMNGQV--SILGDIYSYGILLLEMFTGKRP 605
++ Y+ PE + + + D++S GI+L M G+ P
Sbjct: 170 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 68/145 (46%), Gaps = 17/145 (11%)
Query: 397 IGTGSFGSVY-KGTLGDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHR-----NILRV 450
+G G F +V+ + VA+KV+K + ++ +DE LKS R+ N V
Sbjct: 29 LGWGHFSTVWLSWDIQGKKFVAMKVVK-SAEHYTETALDEIRLLKSVRNSDPNDPNREMV 87
Query: 451 ITACSSVDLEG--NDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVAS 508
+ + G +VFE + + +L +W+ S +YQ L +++ I V
Sbjct: 88 VQLLDDFKISGVNGTHICMVFEVLGH-HLLKWIIKS---NYQGLPLPCVKK--IIQQVLQ 141
Query: 509 ALDYLHHHCDTPIAHCDLKPSNVLL 533
LDYLH C I H D+KP N+LL
Sbjct: 142 GLDYLHTKCR--IIHTDIKPENILL 164
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 69/163 (42%), Gaps = 31/163 (19%)
Query: 397 IGTGSFGSV---YKGTLGDGTIVAIKVLK--LQQQGALKSFIDECNALKSTRHRNILRVI 451
IG+G+ G V Y L VAIK L Q Q K E +K H+NI+ ++
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 89
Query: 452 TACSSVD-LEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASAL 510
+ LE LV E M + NL Q VIQ + + + S L
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELM-DANLXQ----------------VIQ-MELDHERMSYL 131
Query: 511 DY-----LHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAK 548
Y + H I H DLKPSN+++ D T + DFGLA+
Sbjct: 132 LYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR 174
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 68/145 (46%), Gaps = 17/145 (11%)
Query: 397 IGTGSFGSVY-KGTLGDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHR-----NILRV 450
+G G F +V+ + VA+KV+K + ++ +DE LKS R+ N V
Sbjct: 45 LGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYT-ETALDEIRLLKSVRNSDPNDPNREMV 103
Query: 451 ITACSSVDLEG--NDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVAS 508
+ + G +VFE + + +L +W+ S +YQ L +++ I V
Sbjct: 104 VQLLDDFKISGVNGTHICMVFEVLGH-HLLKWIIKS---NYQGLPLPCVKK--IIQQVLQ 157
Query: 509 ALDYLHHHCDTPIAHCDLKPSNVLL 533
LDYLH C I H D+KP N+LL
Sbjct: 158 GLDYLHTKCR--IIHTDIKPENILL 180
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 69/163 (42%), Gaps = 31/163 (19%)
Query: 397 IGTGSFGSV---YKGTLGDGTIVAIKVLK--LQQQGALKSFIDECNALKSTRHRNILRVI 451
IG+G+ G V Y L VAIK L Q Q K E +K H+NI+ ++
Sbjct: 25 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 82
Query: 452 TACSSVD-LEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASAL 510
+ LE LV E M + NL Q VIQ + + + S L
Sbjct: 83 NVFTPQKTLEEFQDVYLVMELM-DANLXQ----------------VIQ-MELDHERMSYL 124
Query: 511 DY-----LHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAK 548
Y + H I H DLKPSN+++ D T + DFGLA+
Sbjct: 125 LYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR 167
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 93/218 (42%), Gaps = 34/218 (15%)
Query: 397 IGTGSFGSVYKGT-LGDGTIVAIKVLKLQQQ-GALKSFIDECNALKSTRHRNILRVITAC 454
+G G++G V VA+K++ +++ ++ E K H N+++
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH- 72
Query: 455 SSVDLEGNDFKALVFEFMSNGNLDQWLHP-----SPAEHYQFKKLSVIQRLNIAIDVASA 509
EGN + L E+ S G L + P P F +L +
Sbjct: 73 ---RREGN-IQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL------------MAG 116
Query: 510 LDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKG 569
+ YLH I H D+KP N+LLD+ + DFGLA +F ++ + + + G
Sbjct: 117 VVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLAT-VFRYNN----RERLLNKMCG 168
Query: 570 SIGYIPPEHMNGQV--SILGDIYSYGILLLEMFTGKRP 605
++ Y+ PE + + + D++S GI+L M G+ P
Sbjct: 169 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 69/163 (42%), Gaps = 31/163 (19%)
Query: 397 IGTGSFGSV---YKGTLGDGTIVAIKVLK--LQQQGALKSFIDECNALKSTRHRNILRVI 451
IG+G+ G V Y L VAIK L Q Q K E +K H+NI+ ++
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLL 89
Query: 452 TACS-SVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASAL 510
+ LE LV E M + NL Q VIQ + + + S L
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELM-DANLXQ----------------VIQ-MELDHERMSYL 131
Query: 511 DY-----LHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAK 548
Y + H I H DLKPSN+++ D T + DFGLA+
Sbjct: 132 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR 174
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 47/87 (54%), Gaps = 7/87 (8%)
Query: 521 IAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMN 580
I H D+KP N+LLD+ + DFGLA +F ++ + + + G++ Y+ PE +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLAT-VFRYNN----RERLLNKMCGTLPYVAPELLK 179
Query: 581 GQV--SILGDIYSYGILLLEMFTGKRP 605
+ + D++S GI+L M G+ P
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 71/165 (43%), Gaps = 35/165 (21%)
Query: 397 IGTGSFGSV---YKGTLGDGTIVAIKVLK--LQQQGALKSFIDECNALKSTRHRNI---L 448
IG+G+ G V Y L VAIK L Q Q K E +K H+NI L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLL 89
Query: 449 RVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVAS 508
V T S++ E D +V E M + NL Q VIQ + + + S
Sbjct: 90 NVFTPQKSLE-EFQDV-YIVMELM-DANLSQ----------------VIQ-MELDHERMS 129
Query: 509 ALDY-----LHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAK 548
L Y + H I H DLKPSN+++ D T + DFGLA+
Sbjct: 130 YLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR 174
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 94/227 (41%), Gaps = 52/227 (22%)
Query: 397 IGTGSFGSVYKGT-LGDGTIVAIKVLKLQ----------QQGALKSFIDECNALKSTRHR 445
+G G++G V VA+K++ ++ ++ + + ++ N +K HR
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYGHR 74
Query: 446 NILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHP-----SPAEHYQFKKLSVIQRL 500
EGN + L E+ S G L + P P F +L
Sbjct: 75 R-------------EGN-IQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL------ 114
Query: 501 NIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKN 560
+ + YLH I H D+KP N+LLD+ + DFGLA +F ++
Sbjct: 115 ------MAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLAT-VFRYNN----R 160
Query: 561 QTVSIGLKGSIGYIPPEHMNGQV--SILGDIYSYGILLLEMFTGKRP 605
+ + + G++ Y+ PE + + + D++S GI+L M G+ P
Sbjct: 161 ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 92/216 (42%), Gaps = 25/216 (11%)
Query: 397 IGTGSFGSVYKGT-LGDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRVITACS 455
IG+GSFG +Y GT + G VAIK+ ++ + E K + + I C
Sbjct: 17 IGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHP--QLHIESKIYKMMQGGVGIPTIRWCG 74
Query: 456 SVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQF--KKLSVIQRLNIAIDVASALDYL 513
+ EG D+ +V E + PS + + F +K S+ L +A + S ++Y+
Sbjct: 75 A---EG-DYNVMVMELLG---------PSLEDLFNFCSRKFSLKTVLLLADQMISRIEYI 121
Query: 514 HHHCDTPIAHCDLKPSNVLL---DKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGS 570
H H D+KP N L+ K ++ DFGLAK + + + L G+
Sbjct: 122 H---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGT 178
Query: 571 IGYIP-PEHMNGQVSILGDIYSYGILLLEMFTGKRP 605
Y H+ + S D+ S G +L+ G P
Sbjct: 179 ARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLP 214
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 92/216 (42%), Gaps = 25/216 (11%)
Query: 397 IGTGSFGSVYKGT-LGDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRVITACS 455
IG+GSFG +Y GT + G VAIK+ ++ + E K + + I C
Sbjct: 15 IGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHP--QLHIESKIYKMMQGGVGIPTIRWCG 72
Query: 456 SVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQF--KKLSVIQRLNIAIDVASALDYL 513
+ EG D+ +V E + PS + + F +K S+ L +A + S ++Y+
Sbjct: 73 A---EG-DYNVMVMELLG---------PSLEDLFNFCSRKFSLKTVLLLADQMISRIEYI 119
Query: 514 HHHCDTPIAHCDLKPSNVLL---DKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGS 570
H H D+KP N L+ K ++ DFGLAK + + + L G+
Sbjct: 120 H---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGT 176
Query: 571 IGYIP-PEHMNGQVSILGDIYSYGILLLEMFTGKRP 605
Y H+ + S D+ S G +L+ G P
Sbjct: 177 ARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLP 212
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 87/214 (40%), Gaps = 17/214 (7%)
Query: 397 IGTGSFGSVYKGTLGD-GTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRVITACS 455
+G G G V+ D VAIK + L ++K + E ++ H NI++V
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILG 78
Query: 456 SVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHH 515
+ D + E S + +++ A + L + L Y+H
Sbjct: 79 PSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLLEEHARLFMYQLLRGLKYIH- 137
Query: 516 HCDTPIAHCDLKPSNVLLD-KDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYI 574
+ H DLKP+N+ ++ +D+ +GDFGLA+ + + S +S GL
Sbjct: 138 --SANVLHRDLKPANLFINTEDLVLKIGDFGLARIM---DPHYSHKGHLSEGLVTKWYRS 192
Query: 575 P-----PEHMNGQVSILGDIYSYGILLLEMFTGK 603
P P + + D+++ G + EM TGK
Sbjct: 193 PRLLLSPNNYTKAI----DMWAAGCIFAEMLTGK 222
>pdb|2Z7X|B Chain B, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
Length = 520
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 67/164 (40%), Gaps = 7/164 (4%)
Query: 184 LDFAENGLTGTIPGNFGSLKDLVRLNFDQNELGSREIGDLNFLKFLANCTSLEVLGLARN 243
LDF+ N LT T+ N G L +L L N+L +E+ + + SL+ L +++N
Sbjct: 329 LDFSNNLLTDTVFENCGHLTELETLILQMNQL--KELSKI--AEMTTQMKSLQQLDISQN 384
Query: 244 SFGGEMPISIANLSTHLRRLTMGENLMHGNIPVXXXXXXXXXXXXXXXXXXXXSVPEVIG 303
S + + + L L M N++ I S+P+ +
Sbjct: 385 SVSYDEKKGDCSWTKSLLSLNMSSNILTDTI---FRCLPPRIKVLDLHSNKIKSIPKQVV 441
Query: 304 RLNKLEGLGLNVNKFSGLIPSSLGNLTILTRLWMEENRLEGSIP 347
+L L+ L + N+ + LT L ++W+ N + S P
Sbjct: 442 KLEALQELNVASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 485
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 71/165 (43%), Gaps = 35/165 (21%)
Query: 397 IGTGSFGSV---YKGTLGDGTIVAIKVLK--LQQQGALKSFIDECNALKSTRHRNI---L 448
IG+G+ G V Y L VAIK L Q Q K E +K H+NI L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 449 RVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVAS 508
V T S++ E D +V E M + NL Q VIQ + + + S
Sbjct: 90 NVFTPQKSLE-EFQDV-YIVMELM-DANLSQ----------------VIQ-MELDHERMS 129
Query: 509 ALDY-----LHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAK 548
L Y + H I H DLKPSN+++ D T + DFGLA+
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR 174
>pdb|3E6J|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor (Vlr)
Rbc36 In Complex With H-Trisaccharide
Length = 229
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 67/169 (39%), Gaps = 34/169 (20%)
Query: 169 GSIPVSLSNASNLQVLDFAENGLTGTIPGNFGSLKDLVRLNFDQNELGSREIGDLNFLKF 228
S+P + +N Q+L +N +T PG F SL +L L N+LG+ +G + L
Sbjct: 32 ASVPAGI--PTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSL-- 87
Query: 229 LANCTSLEVLGLARNSFGGEMPISIANLSTHLRRLTMGENLMHGNIPVXXXXXXXXXXXX 288
T L VL L N +P ++ + HL+ L M N +
Sbjct: 88 ----TQLTVLDLGTNQL-TVLPSAVFDRLVHLKELFMCCNKL------------------ 124
Query: 289 XXXXXXXXSVPEVIGRLNKLEGLGLNVNKFSGLIPSSLGNLTILTRLWM 337
+P I RL L L L+ N+ + + L+ LT ++
Sbjct: 125 -------TELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYL 166
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 94/218 (43%), Gaps = 29/218 (13%)
Query: 397 IGTGSFGSVYKGT-LGDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRVITACS 455
IG+GSFG +Y GT + VAIK+ ++ + L ++ IL+ T
Sbjct: 15 IGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--------HPQLLYESKIYRILQGGTGIP 66
Query: 456 SVDLEG--NDFKALVFEFMSNGNLDQWLHPSPAEHYQF--KKLSVIQRLNIAIDVASALD 511
+V G D+ LV + L PS + + F +KLS+ L +A + + ++
Sbjct: 67 NVRWFGVEGDYNVLVMDL---------LGPSLEDLFNFCSRKLSLKTVLMLADQMINRVE 117
Query: 512 YLHHHCDTPIAHCDLKPSNVLLDKDMTA---HVGDFGLAKFLFEISDNPSKNQTVSIGLK 568
++H H D+KP N L+ A ++ DFGLAK + S + + L
Sbjct: 118 FVHSKS---FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYRENKNLT 174
Query: 569 GSIGYIPPE-HMNGQVSILGDIYSYGILLLEMFTGKRP 605
G+ Y H+ + S D+ S G +L+ G P
Sbjct: 175 GTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLP 212
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 71/165 (43%), Gaps = 35/165 (21%)
Query: 397 IGTGSFGSV---YKGTLGDGTIVAIKVLK--LQQQGALKSFIDECNALKSTRHRNI---L 448
IG+G+ G V Y L VAIK L Q Q K E +K H+NI L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLL 89
Query: 449 RVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVAS 508
V T S++ E D +V E M + NL Q VIQ + + + S
Sbjct: 90 NVFTPQKSLE-EFQDV-YIVMELM-DANLSQ----------------VIQ-MELDHERMS 129
Query: 509 ALDY-----LHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAK 548
L Y + H I H DLKPSN+++ D T + DFGLA+
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR 174
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 69/163 (42%), Gaps = 31/163 (19%)
Query: 397 IGTGSFGSV---YKGTLGDGTIVAIKVLK--LQQQGALKSFIDECNALKSTRHRNILRVI 451
IG+G+ G V Y L VAIK L Q Q K E +K H+NI+ ++
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLL 89
Query: 452 TACS-SVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASAL 510
+ LE LV E M + NL Q VIQ + + + S L
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELM-DANLCQ----------------VIQ-MELDHERMSYL 131
Query: 511 DY-----LHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAK 548
Y + H I H DLKPSN+++ D T + DFGLA+
Sbjct: 132 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR 174
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 71/165 (43%), Gaps = 35/165 (21%)
Query: 397 IGTGSFGSV---YKGTLGDGTIVAIKVLK--LQQQGALKSFIDECNALKSTRHRNI---L 448
IG+G+ G V Y L VAIK L Q Q K E +K H+NI L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 449 RVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVAS 508
V T S++ E D +V E M + NL Q VIQ + + + S
Sbjct: 90 NVFTPQKSLE-EFQDV-YIVMELM-DANLSQ----------------VIQ-MELDHERMS 129
Query: 509 ALDY-----LHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAK 548
L Y + H I H DLKPSN+++ D T + DFGLA+
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 99/230 (43%), Gaps = 37/230 (16%)
Query: 389 DNFSKENLIGTGSFGSVYK------GTLGDGTIVAIKVLKLQQQGALKSFID-ECNALKS 441
D + +G+G F V K G + + K ++G + I+ E + LK
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 442 TRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLN 501
+H N++ + E L+ E ++ G L +L AE + + L
Sbjct: 71 IQHPNVITLHEV-----YENKTDVILILELVAGGELFDFL----AEKESLTEEEATEFLK 121
Query: 502 IAIDVASALDYLHHHCDTPIAHCDLKPSNV-LLDKDMTA---HVGDFGLA-KFLFEISDN 556
+ + + YLH IAH DLKP N+ LLD+++ + DFGLA K F N
Sbjct: 122 ---QILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF---GN 172
Query: 557 PSKNQTVSIGLKGSIGYIPPEHMNGQ-VSILGDIYSYGILLLEMFTGKRP 605
KN + G+ ++ PE +N + + + D++S G++ + +G P
Sbjct: 173 EFKN------IFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 69/163 (42%), Gaps = 31/163 (19%)
Query: 397 IGTGSFGSV---YKGTLGDGTIVAIKVLK--LQQQGALKSFIDECNALKSTRHRNILRVI 451
IG+G+ G V Y L VAIK L Q Q K E +K H+NI+ ++
Sbjct: 25 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 82
Query: 452 TACS-SVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASAL 510
+ LE LV E M + NL Q VIQ + + + S L
Sbjct: 83 NVFTPQKTLEEFQDVYLVMELM-DANLCQ----------------VIQ-MELDHERMSYL 124
Query: 511 DY-----LHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAK 548
Y + H I H DLKPSN+++ D T + DFGLA+
Sbjct: 125 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 167
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 70/158 (44%), Gaps = 21/158 (13%)
Query: 397 IGTGSFGSV---YKGTLGDGTIVAIKVLK--LQQQGALKSFIDECNALKSTRHRNILRVI 451
IG+G+ G V Y L VAIK L Q Q K E +K H+NI+ ++
Sbjct: 26 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 83
Query: 452 TACSSVD-LEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASAL 510
+ LE LV E M + NL Q + +H + L + Q L +
Sbjct: 84 NVFTPQKTLEEFQDVYLVMELM-DANLCQVIQ-MELDHERMSYL-LYQML-------CGI 133
Query: 511 DYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAK 548
+LH I H DLKPSN+++ D T + DFGLA+
Sbjct: 134 KHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 168
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 70/158 (44%), Gaps = 21/158 (13%)
Query: 397 IGTGSFGSV---YKGTLGDGTIVAIKVLK--LQQQGALKSFIDECNALKSTRHRNILRVI 451
IG+G+ G V Y L VAIK L Q Q K E +K H+NI+ ++
Sbjct: 26 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 83
Query: 452 TACS-SVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASAL 510
+ LE LV E M + NL Q + +H + L + Q L +
Sbjct: 84 NVFTPQKTLEEFQDVYLVMELM-DANLCQVIQ-MELDHERMSYL-LYQML-------CGI 133
Query: 511 DYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAK 548
+LH I H DLKPSN+++ D T + DFGLA+
Sbjct: 134 KHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 168
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 69/163 (42%), Gaps = 31/163 (19%)
Query: 397 IGTGSFGSV---YKGTLGDGTIVAIKVLK--LQQQGALKSFIDECNALKSTRHRNILRVI 451
IG+G+ G V Y L VAIK L Q Q K E +K H+NI+ ++
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 89
Query: 452 TACS-SVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASAL 510
+ LE LV E M + NL Q VIQ + + + S L
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELM-DANLCQ----------------VIQ-MELDHERMSYL 131
Query: 511 DY-----LHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAK 548
Y + H I H DLKPSN+++ D T + DFGLA+
Sbjct: 132 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 69/163 (42%), Gaps = 31/163 (19%)
Query: 397 IGTGSFGSV---YKGTLGDGTIVAIKVLK--LQQQGALKSFIDECNALKSTRHRNILRVI 451
IG+G+ G V Y L VAIK L Q Q K E +K H+NI+ ++
Sbjct: 33 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 90
Query: 452 TACS-SVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASAL 510
+ LE LV E M + NL Q VIQ + + + S L
Sbjct: 91 NVFTPQKTLEEFQDVYLVMELM-DANLCQ----------------VIQ-MELDHERMSYL 132
Query: 511 DY-----LHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAK 548
Y + H I H DLKPSN+++ D T + DFGLA+
Sbjct: 133 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 175
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 69/163 (42%), Gaps = 31/163 (19%)
Query: 397 IGTGSFGSV---YKGTLGDGTIVAIKVLK--LQQQGALKSFIDECNALKSTRHRNILRVI 451
IG+G+ G V Y L VAIK L Q Q K E +K H+NI+ ++
Sbjct: 33 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 90
Query: 452 TACSSVD-LEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASAL 510
+ LE LV E M + NL Q VIQ + + + S L
Sbjct: 91 NVFTPQKTLEEFQDVYLVMELM-DANLCQ----------------VIQ-MELDHERMSYL 132
Query: 511 DY-----LHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAK 548
Y + H I H DLKPSN+++ D T + DFGLA+
Sbjct: 133 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 175
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 70/158 (44%), Gaps = 21/158 (13%)
Query: 397 IGTGSFGSV---YKGTLGDGTIVAIKVLK--LQQQGALKSFIDECNALKSTRHRNILRVI 451
IG+G+ G V Y L VAIK L Q Q K E +K H+NI+ ++
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 89
Query: 452 TACSSVD-LEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASAL 510
+ LE LV E M + NL Q + +H + L + Q L +
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME-LDHERMSYL-LYQML-------CGI 139
Query: 511 DYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAK 548
+LH I H DLKPSN+++ D T + DFGLA+
Sbjct: 140 KHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 69/163 (42%), Gaps = 31/163 (19%)
Query: 397 IGTGSFGSV---YKGTLGDGTIVAIKVLK--LQQQGALKSFIDECNALKSTRHRNILRVI 451
IG+G+ G V Y L VAIK L Q Q K E +K H+NI+ ++
Sbjct: 31 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 88
Query: 452 TACS-SVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASAL 510
+ LE LV E M + NL Q VIQ + + + S L
Sbjct: 89 NVFTPQKTLEEFQDVYLVMELM-DANLCQ----------------VIQ-MELDHERMSYL 130
Query: 511 DY-----LHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAK 548
Y + H I H DLKPSN+++ D T + DFGLA+
Sbjct: 131 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 173
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 70/158 (44%), Gaps = 21/158 (13%)
Query: 397 IGTGSFGSV---YKGTLGDGTIVAIKVLK--LQQQGALKSFIDECNALKSTRHRNILRVI 451
IG+G+ G V Y L VAIK L Q Q K E +K H+NI+ ++
Sbjct: 70 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 127
Query: 452 TACS-SVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASAL 510
+ LE LV E M + NL Q + +H + L + Q L +
Sbjct: 128 NVFTPQKTLEEFQDVYLVMELM-DANLCQVIQ-MELDHERMSYL-LYQML-------CGI 177
Query: 511 DYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAK 548
+LH I H DLKPSN+++ D T + DFGLA+
Sbjct: 178 KHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 212
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 86/193 (44%), Gaps = 29/193 (15%)
Query: 368 GTIPKEVRQSGMSYSDISKSTDNFSK--ENL--IGTGSFGSV---YKGTLGDGTIVAIKV 420
G++ + R + +I ST K +NL IG+G+ G V Y L VAIK
Sbjct: 4 GSMSRSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKK 61
Query: 421 LK--LQQQGALKSFIDECNALKSTRHRNI---LRVITACSSVDLEGNDFKALVFEFMSNG 475
L Q Q K E +K H+NI L V T S++ E D +V E M +
Sbjct: 62 LSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLE-EFQDV-YIVMELM-DA 118
Query: 476 NLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDK 535
NL Q + +H + L + Q L + +LH I H DLKPSN+++
Sbjct: 119 NLCQVIQ-MELDHERMSYL-LYQML-------CGIKHLH---SAGIIHRDLKPSNIVVKS 166
Query: 536 DMTAHVGDFGLAK 548
D T + DFGLA+
Sbjct: 167 DCTLKILDFGLAR 179
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 86/193 (44%), Gaps = 29/193 (15%)
Query: 368 GTIPKEVRQSGMSYSDISKSTDNFSK--ENL--IGTGSFGSV---YKGTLGDGTIVAIKV 420
G++ + R + +I ST K +NL IG+G+ G V Y L VAIK
Sbjct: 1 GSMSRSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKK 58
Query: 421 LK--LQQQGALKSFIDECNALKSTRHRNI---LRVITACSSVDLEGNDFKALVFEFMSNG 475
L Q Q K E +K H+NI L V T S++ E D +V E M +
Sbjct: 59 LSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLE-EFQDV-YIVMELM-DA 115
Query: 476 NLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDK 535
NL Q + +H + L + Q L + +LH I H DLKPSN+++
Sbjct: 116 NLCQVIQME-LDHERMSYL-LYQML-------CGIKHLH---SAGIIHRDLKPSNIVVKS 163
Query: 536 DMTAHVGDFGLAK 548
D T + DFGLA+
Sbjct: 164 DCTLKILDFGLAR 176
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 70/158 (44%), Gaps = 21/158 (13%)
Query: 397 IGTGSFGSV---YKGTLGDGTIVAIKVLK--LQQQGALKSFIDECNALKSTRHRNILRVI 451
IG+G+ G V Y L VAIK L Q Q K E +K H+NI+ ++
Sbjct: 70 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 127
Query: 452 TACS-SVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASAL 510
+ LE LV E M + NL Q + +H + L + Q L +
Sbjct: 128 NVFTPQKTLEEFQDVYLVMELM-DANLCQVIQ-MELDHERMSYL-LYQML-------CGI 177
Query: 511 DYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAK 548
+LH I H DLKPSN+++ D T + DFGLA+
Sbjct: 178 KHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 212
>pdb|2V62|A Chain A, Structure Of Vaccinia-Related Kinase 2
pdb|2V62|B Chain B, Structure Of Vaccinia-Related Kinase 2
Length = 345
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 50/236 (21%), Positives = 92/236 (38%), Gaps = 24/236 (10%)
Query: 397 IGTGSFGSVYKG---TLGDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRVITA 453
IG+G FG +Y + + ++ Q+ G L S E + ++ ++
Sbjct: 45 IGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFS---ELKFYQRVAKKDCIKKWIE 101
Query: 454 CSSVDLEG---------NDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAI 504
+D G +FK + FM L L ++ FKK +V+Q + I
Sbjct: 102 RKQLDYLGIPLFYGSGLTEFKGRSYRFMVMERLGIDLQKISGQNGTFKKSTVLQ---LGI 158
Query: 505 DVASALDYLHHHCDTPIAHCDLKPSNVLL--DKDMTAHVGDFGLAKFLFEISDNPSKNQT 562
+ L+Y+H + H D+K +N+LL ++ D+GL+ ++ +
Sbjct: 159 RMLDVLEYIH---ENEYVHGDIKAANLLLGYKNPDQVYLADYGLSYRYCPNGNHKQYQEN 215
Query: 563 VSIGLKGSIGYIPPE-HMNGQVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIH 617
G G+I + + H +S D+ G +L GK P KD ++
Sbjct: 216 PRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQ 271
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 63/142 (44%), Gaps = 22/142 (15%)
Query: 466 ALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCD 525
ALVFE ++N + Q ++ L+ ++ ALDY H I H D
Sbjct: 110 ALVFEHVNNTDFKQ----------LYQTLTDYDIRFYMYEILKALDYCH---SMGIMHRD 156
Query: 526 LKPSNVLLDKDMTA-HVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNGQVS 584
+KP NVL+D + + D+GLA+F +P + V + + G P ++ Q+
Sbjct: 157 VKPHNVLIDHEHRKLRLIDWGLAEFY-----HPGQEYNVRVASRYFKG--PELLVDYQMY 209
Query: 585 ILG-DIYSYGILLLEMFTGKRP 605
D++S G +L M K P
Sbjct: 210 DYSLDMWSLGCMLASMIFRKEP 231
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 99/230 (43%), Gaps = 37/230 (16%)
Query: 389 DNFSKENLIGTGSFGSVYK------GTLGDGTIVAIKVLKLQQQGALKSFID-ECNALKS 441
D + +G+G F V K G + + K ++G + I+ E + LK
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 442 TRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLN 501
+H N++ + E L+ E ++ G L +L AE + + L
Sbjct: 71 IQHPNVITLHEV-----YENKTDVILILELVAGGELFDFL----AEKESLTEEEATEFLK 121
Query: 502 IAIDVASALDYLHHHCDTPIAHCDLKPSNV-LLDKDMTA---HVGDFGLA-KFLFEISDN 556
+ + + YLH IAH DLKP N+ LLD+++ + DFGLA K F N
Sbjct: 122 ---QILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF---GN 172
Query: 557 PSKNQTVSIGLKGSIGYIPPEHMNGQ-VSILGDIYSYGILLLEMFTGKRP 605
KN + G+ ++ PE +N + + + D++S G++ + +G P
Sbjct: 173 EFKN------IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 72/160 (45%), Gaps = 25/160 (15%)
Query: 397 IGTGSFGSV---YKGTLGDGTIVAIKVLK--LQQQGALKSFIDECNALKSTRHRNI---L 448
IG+G+ G V Y L VAIK L Q Q K E +K H+NI L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 449 RVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVAS 508
V T S++ E D +V E M + NL Q + +H + L + Q L
Sbjct: 90 NVFTPQKSLE-EFQDV-YIVMELM-DANLCQVIQ-MELDHERMSYL-LYQML-------C 137
Query: 509 ALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAK 548
+ +LH I H DLKPSN+++ D T + DFGLA+
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 90/224 (40%), Gaps = 41/224 (18%)
Query: 397 IGTGSFGSVYKGT-LGDGTIVAIKVLKLQQQGALKSFIDECNALK------STRHRNILR 449
IG+GSFG +Y G + G VAIK+ EC K ++ +++
Sbjct: 17 IGSGSFGDIYLGANIASGEEVAIKL--------------ECVKTKHPQLHIESKFYKMMQ 62
Query: 450 VITACSSVDLEG--NDFKALVFEFMSNGNLDQWLHPSPAEHYQF--KKLSVIQRLNIAID 505
S+ G D+ +V E + PS + + F +K S+ L +A
Sbjct: 63 GGVGIPSIKWCGAEGDYNVMVMELLG---------PSLEDLFNFCSRKFSLKTVLLLADQ 113
Query: 506 VASALDYLHHHCDTPIAHCDLKPSNVLL---DKDMTAHVGDFGLAKFLFEISDNPSKNQT 562
+ S ++Y+H H D+KP N L+ K ++ DFGLAK + +
Sbjct: 114 MISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYR 170
Query: 563 VSIGLKGSIGYIP-PEHMNGQVSILGDIYSYGILLLEMFTGKRP 605
+ L G+ Y H+ + S D+ S G +L+ G P
Sbjct: 171 ENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLP 214
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 99/230 (43%), Gaps = 37/230 (16%)
Query: 389 DNFSKENLIGTGSFGSVYK------GTLGDGTIVAIKVLKLQQQGALKSFID-ECNALKS 441
D + +G+G F V K G + + K ++G + I+ E + LK
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 442 TRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLN 501
+H N++ + E L+ E ++ G L +L AE + + L
Sbjct: 71 IQHPNVITLHEVY-----ENKTDVILILELVAGGELFDFL----AEKESLTEEEATEFLK 121
Query: 502 IAIDVASALDYLHHHCDTPIAHCDLKPSNV-LLDKDMTA---HVGDFGLA-KFLFEISDN 556
+ + + YLH IAH DLKP N+ LLD+++ + DFGLA K F N
Sbjct: 122 ---QILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF---GN 172
Query: 557 PSKNQTVSIGLKGSIGYIPPEHMNGQ-VSILGDIYSYGILLLEMFTGKRP 605
KN + G+ ++ PE +N + + + D++S G++ + +G P
Sbjct: 173 EFKN------IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 99/230 (43%), Gaps = 37/230 (16%)
Query: 389 DNFSKENLIGTGSFGSVYK------GTLGDGTIVAIKVLKLQQQGALKSFID-ECNALKS 441
D + +G+G F V K G + + K ++G + I+ E + LK
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 442 TRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLN 501
+H N++ + E L+ E ++ G L +L AE + + L
Sbjct: 71 IQHPNVITLHEVY-----ENKTDVILILELVAGGELFDFL----AEKESLTEEEATEFLK 121
Query: 502 IAIDVASALDYLHHHCDTPIAHCDLKPSNV-LLDKDMTA---HVGDFGLA-KFLFEISDN 556
+ + + YLH IAH DLKP N+ LLD+++ + DFGLA K F N
Sbjct: 122 ---QILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF---GN 172
Query: 557 PSKNQTVSIGLKGSIGYIPPEHMNGQ-VSILGDIYSYGILLLEMFTGKRP 605
KN + G+ ++ PE +N + + + D++S G++ + +G P
Sbjct: 173 EFKN------IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 71/165 (43%), Gaps = 35/165 (21%)
Query: 397 IGTGSFGSV---YKGTLGDGTIVAIKVLK--LQQQGALKSFIDECNALKSTRHRNI---L 448
IG+G+ G V Y L VAIK L Q Q K E +K H+NI L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 449 RVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVAS 508
V T S++ E D +V E M + NL Q VIQ + + + S
Sbjct: 90 NVFTPQKSLE-EFQDV-YIVMELM-DANLCQ----------------VIQ-MELDHERMS 129
Query: 509 ALDY-----LHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAK 548
L Y + H I H DLKPSN+++ D T + DFGLA+
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 99/230 (43%), Gaps = 37/230 (16%)
Query: 389 DNFSKENLIGTGSFGSVYK------GTLGDGTIVAIKVLKLQQQGALKSFID-ECNALKS 441
D + +G+G F V K G + + K ++G + I+ E + LK
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 442 TRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLN 501
+H N++ + E L+ E ++ G L +L AE + + L
Sbjct: 71 IQHPNVITLHEVY-----ENKTDVILILELVAGGELFDFL----AEKESLTEEEATEFLK 121
Query: 502 IAIDVASALDYLHHHCDTPIAHCDLKPSNV-LLDKDMTA---HVGDFGLA-KFLFEISDN 556
+ + + YLH IAH DLKP N+ LLD+++ + DFGLA K F N
Sbjct: 122 ---QILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF---GN 172
Query: 557 PSKNQTVSIGLKGSIGYIPPEHMNGQ-VSILGDIYSYGILLLEMFTGKRP 605
KN + G+ ++ PE +N + + + D++S G++ + +G P
Sbjct: 173 EFKN------IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 99/230 (43%), Gaps = 37/230 (16%)
Query: 389 DNFSKENLIGTGSFGSVYK------GTLGDGTIVAIKVLKLQQQGALKSFID-ECNALKS 441
D + +G+G F V K G + + K ++G + I+ E + LK
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 442 TRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLN 501
+H N++ + E L+ E ++ G L +L AE + + L
Sbjct: 71 IQHPNVITLHEVY-----ENKTDVILILELVAGGELFDFL----AEKESLTEEEATEFLK 121
Query: 502 IAIDVASALDYLHHHCDTPIAHCDLKPSNV-LLDKDMTA---HVGDFGLA-KFLFEISDN 556
+ + + YLH IAH DLKP N+ LLD+++ + DFGLA K F N
Sbjct: 122 ---QILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF---GN 172
Query: 557 PSKNQTVSIGLKGSIGYIPPEHMNGQ-VSILGDIYSYGILLLEMFTGKRP 605
KN + G+ ++ PE +N + + + D++S G++ + +G P
Sbjct: 173 EFKN------IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 99/230 (43%), Gaps = 37/230 (16%)
Query: 389 DNFSKENLIGTGSFGSVYK------GTLGDGTIVAIKVLKLQQQGALKSFID-ECNALKS 441
D + +G+G F V K G + + K ++G + I+ E + LK
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 442 TRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLN 501
+H N++ + E L+ E ++ G L +L AE + + L
Sbjct: 71 IQHPNVITLHEV-----YENKTDVILILELVAGGELFDFL----AEKESLTEEEATEFLK 121
Query: 502 IAIDVASALDYLHHHCDTPIAHCDLKPSNV-LLDKDMTA---HVGDFGLA-KFLFEISDN 556
+ + + YLH IAH DLKP N+ LLD+++ + DFGLA K F N
Sbjct: 122 ---QILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF---GN 172
Query: 557 PSKNQTVSIGLKGSIGYIPPEHMNGQ-VSILGDIYSYGILLLEMFTGKRP 605
KN + G+ ++ PE +N + + + D++S G++ + +G P
Sbjct: 173 EFKN------IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 72/160 (45%), Gaps = 25/160 (15%)
Query: 397 IGTGSFGSV---YKGTLGDGTIVAIKVLK--LQQQGALKSFIDECNALKSTRHRNI---L 448
IG+G+ G V Y L VAIK L Q Q K E +K H+NI L
Sbjct: 26 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 83
Query: 449 RVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVAS 508
V T S++ E D +V E M + NL Q + +H + L + Q L
Sbjct: 84 NVFTPQKSLE-EFQDV-YIVMELM-DANLCQVIQ-MELDHERMSYL-LYQML-------C 131
Query: 509 ALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAK 548
+ +LH I H DLKPSN+++ D T + DFGLA+
Sbjct: 132 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 168
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 72/160 (45%), Gaps = 25/160 (15%)
Query: 397 IGTGSFGSV---YKGTLGDGTIVAIKVLK--LQQQGALKSFIDECNALKSTRHRNI---L 448
IG+G+ G V Y L VAIK L Q Q K E +K H+NI L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 449 RVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVAS 508
V T S++ E D +V E M + NL Q + +H + L + Q L
Sbjct: 90 NVFTPQKSLE-EFQDV-YIVMELM-DANLCQVIQ-MELDHERMSYL-LYQML-------C 137
Query: 509 ALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAK 548
+ +LH I H DLKPSN+++ D T + DFGLA+
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 72/160 (45%), Gaps = 25/160 (15%)
Query: 397 IGTGSFGSV---YKGTLGDGTIVAIKVLK--LQQQGALKSFIDECNALKSTRHRNI---L 448
IG+G+ G V Y L VAIK L Q Q K E +K H+NI L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 449 RVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVAS 508
V T S++ E D +V E M + NL Q + +H + L + Q L
Sbjct: 90 NVFTPQKSLE-EFQDV-YIVMELM-DANLCQVIQ-MELDHERMSYL-LYQML-------C 137
Query: 509 ALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAK 548
+ +LH I H DLKPSN+++ D T + DFGLA+
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 72/160 (45%), Gaps = 25/160 (15%)
Query: 397 IGTGSFGSV---YKGTLGDGTIVAIKVLK--LQQQGALKSFIDECNALKSTRHRNI---L 448
IG+G+ G V Y L VAIK L Q Q K E +K H+NI L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 449 RVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVAS 508
V T S++ E D +V E M + NL Q + +H + L + Q L
Sbjct: 90 NVFTPQKSLE-EFQDV-YIVMELM-DANLCQVIQ-MELDHERMSYL-LYQML-------C 137
Query: 509 ALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAK 548
+ +LH I H DLKPSN+++ D T + DFGLA+
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 72/160 (45%), Gaps = 25/160 (15%)
Query: 397 IGTGSFGSV---YKGTLGDGTIVAIKVLK--LQQQGALKSFIDECNALKSTRHRNI---L 448
IG+G+ G V Y L VAIK L Q Q K E +K H+NI L
Sbjct: 33 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 90
Query: 449 RVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVAS 508
V T S++ E D +V E M + NL Q + +H + L + Q L
Sbjct: 91 NVFTPQKSLE-EFQDV-YIVMELM-DANLCQVIQ-MELDHERMSYL-LYQML-------C 138
Query: 509 ALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAK 548
+ +LH I H DLKPSN+++ D T + DFGLA+
Sbjct: 139 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 175
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 64/143 (44%), Gaps = 21/143 (14%)
Query: 467 LVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDL 526
++ E M G L + + + ++ + I R D+ +A+ +LH H IAH D+
Sbjct: 103 IIMECMEGGELFSRIQERGDQAFTEREAAEIMR-----DIGTAIQFLHSH---NIAHRDV 154
Query: 527 KPSNVLL---DKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNGQ- 582
KP N+L +KD + DFG AK E + N + + Y+ PE + +
Sbjct: 155 KPENLLYTSKEKDAVLKLTDFGFAK---ETTQNALQTPCY------TPYYVAPEVLGPEK 205
Query: 583 VSILGDIYSYGILLLEMFTGKRP 605
D++S G+++ + G P
Sbjct: 206 YDKSCDMWSLGVIMYILLCGFPP 228
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 99/230 (43%), Gaps = 37/230 (16%)
Query: 389 DNFSKENLIGTGSFGSVYK------GTLGDGTIVAIKVLKLQQQGALKSFID-ECNALKS 441
D + +G+G F V K G + + K ++G + I+ E + LK
Sbjct: 10 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 69
Query: 442 TRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLN 501
+H N++ + E L+ E ++ G L +L AE + + L
Sbjct: 70 IQHPNVITLHEV-----YENKTDVILILELVAGGELFDFL----AEKESLTEEEATEFLK 120
Query: 502 IAIDVASALDYLHHHCDTPIAHCDLKPSNV-LLDKDMTA---HVGDFGLA-KFLFEISDN 556
+ + + YLH IAH DLKP N+ LLD+++ + DFGLA K F N
Sbjct: 121 ---QILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF---GN 171
Query: 557 PSKNQTVSIGLKGSIGYIPPEHMNGQ-VSILGDIYSYGILLLEMFTGKRP 605
KN + G+ ++ PE +N + + + D++S G++ + +G P
Sbjct: 172 EFKN------IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 215
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 99/230 (43%), Gaps = 37/230 (16%)
Query: 389 DNFSKENLIGTGSFGSVYK------GTLGDGTIVAIKVLKLQQQGALKSFID-ECNALKS 441
D + +G+G F V K G + + K ++G + I+ E + LK
Sbjct: 10 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 69
Query: 442 TRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLN 501
+H N++ + E L+ E ++ G L +L AE + + L
Sbjct: 70 IQHPNVITLHEV-----YENKTDVILILELVAGGELFDFL----AEKESLTEEEATEFLK 120
Query: 502 IAIDVASALDYLHHHCDTPIAHCDLKPSNV-LLDKDMTA---HVGDFGLA-KFLFEISDN 556
+ + + YLH IAH DLKP N+ LLD+++ + DFGLA K F N
Sbjct: 121 ---QILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF---GN 171
Query: 557 PSKNQTVSIGLKGSIGYIPPEHMNGQ-VSILGDIYSYGILLLEMFTGKRP 605
KN + G+ ++ PE +N + + + D++S G++ + +G P
Sbjct: 172 EFKN------IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 215
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 64/142 (45%), Gaps = 22/142 (15%)
Query: 466 ALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCD 525
ALVFE+++N + Q ++ L+ ++ ALDY H I H D
Sbjct: 116 ALVFEYINNTDFKQ----------LYQILTDFDIRFYMYELLKALDYCH---SKGIMHRD 162
Query: 526 LKPSNVLLDKDMTA-HVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNGQVS 584
+KP NV++D + D+GLA+F +P++ V + + G P ++ Q+
Sbjct: 163 VKPHNVMIDHQQKKLRLIDWGLAEFY-----HPAQEYNVRVASRYFKG--PELLVDYQMY 215
Query: 585 ILG-DIYSYGILLLEMFTGKRP 605
D++S G +L M + P
Sbjct: 216 DYSLDMWSLGCMLASMIFRREP 237
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 63/142 (44%), Gaps = 22/142 (15%)
Query: 466 ALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCD 525
ALVFE ++N + Q ++ L+ ++ ALDY H I H D
Sbjct: 110 ALVFEHVNNTDFKQ----------LYQTLTDYDIRFYMYEILKALDYCH---SMGIMHRD 156
Query: 526 LKPSNVLLDKDMTA-HVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNGQVS 584
+KP NV++D + + D+GLA+F +P + V + + G P ++ Q+
Sbjct: 157 VKPHNVMIDHEHRKLRLIDWGLAEFY-----HPGQEYNVRVASRYFKG--PELLVDYQMY 209
Query: 585 ILG-DIYSYGILLLEMFTGKRP 605
D++S G +L M K P
Sbjct: 210 DYSLDMWSLGCMLASMIFRKEP 231
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 105/261 (40%), Gaps = 46/261 (17%)
Query: 384 ISKSTDNFSKENLIGTGSFG-SVYKGTLGDGTIVAIKVLKLQQQGALKSFIDECNALKST 442
I +D + IG G+FG + +VA+K ++ + + ++ E +S
Sbjct: 14 IMHDSDRYELVKDIGAGNFGVARLMRDKQANELVAVKYIE-RGEKIDENVKREIINHRSL 72
Query: 443 RHRNILR---VITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQR 499
RH NI+R VI + + A+V E+ S G L + + + + + Q+
Sbjct: 73 RHPNIVRFKEVILTPTHL--------AIVMEYASGGELFERIC-NAGRFSEDEARFFFQQ 123
Query: 500 LNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAH--VGDFGLAKFLFEISDNP 557
L + A A+ +AH DLK N LLD + DFG +K
Sbjct: 124 LISGVSYAHAMQ---------VAHRDLKLENTLLDGSPAPRLKIADFGYSK--------A 166
Query: 558 SKNQTVSIGLKGSIGYIPPE-----HMNGQVSILGDIYSYGILLLEMFTGKRPTGDM--- 609
S + G+ YI PE +G+V+ D++S G+ L M G P D
Sbjct: 167 SVLHSQPKSAVGTPAYIAPEVLLKKEYDGKVA---DVWSCGVTLYVMLVGAYPFEDPEEP 223
Query: 610 --FKDDFSIHMFVSMALPDHV 628
F+ + V A+PD+V
Sbjct: 224 KNFRKTIHRILNVQYAIPDYV 244
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 64/142 (45%), Gaps = 22/142 (15%)
Query: 466 ALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCD 525
ALVFE+++N + Q ++ L+ ++ ALDY H I H D
Sbjct: 111 ALVFEYINNTDFKQ----------LYQILTDFDIRFYMYELLKALDYCH---SKGIMHRD 157
Query: 526 LKPSNVLLDKDMTA-HVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNGQVS 584
+KP NV++D + D+GLA+F +P++ V + + G P ++ Q+
Sbjct: 158 VKPHNVMIDHQQKKLRLIDWGLAEFY-----HPAQEYNVRVASRYFKG--PELLVDYQMY 210
Query: 585 ILG-DIYSYGILLLEMFTGKRP 605
D++S G +L M + P
Sbjct: 211 DYSLDMWSLGCMLASMIFRREP 232
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 63/142 (44%), Gaps = 22/142 (15%)
Query: 466 ALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCD 525
ALVFE ++N + Q ++ L+ ++ ALDY H I H D
Sbjct: 110 ALVFEHVNNTDFKQ----------LYQTLTDYDIRFYMYEILKALDYCH---SMGIMHRD 156
Query: 526 LKPSNVLLDKDMTA-HVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNGQVS 584
+KP NV++D + + D+GLA+F +P + V + + G P ++ Q+
Sbjct: 157 VKPHNVMIDHEHRKLRLIDWGLAEFY-----HPGQEYNVRVASRYFKG--PELLVDYQMY 209
Query: 585 ILG-DIYSYGILLLEMFTGKRP 605
D++S G +L M K P
Sbjct: 210 DYSLDMWSLGCMLASMIFRKEP 231
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 63/142 (44%), Gaps = 22/142 (15%)
Query: 466 ALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCD 525
ALVFE ++N + Q ++ L+ ++ ALDY H I H D
Sbjct: 110 ALVFEHVNNTDFKQ----------LYQTLTDYDIRFYMYEILKALDYCH---SMGIMHRD 156
Query: 526 LKPSNVLLDKDMTA-HVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNGQVS 584
+KP NV++D + + D+GLA+F +P + V + + G P ++ Q+
Sbjct: 157 VKPHNVMIDHEHRKLRLIDWGLAEFY-----HPGQEYNVRVASRYFKG--PELLVDYQMY 209
Query: 585 ILG-DIYSYGILLLEMFTGKRP 605
D++S G +L M K P
Sbjct: 210 DYSLDMWSLGCMLASMIFRKEP 231
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 63/142 (44%), Gaps = 22/142 (15%)
Query: 466 ALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCD 525
ALVFE ++N + Q ++ L+ ++ ALDY H I H D
Sbjct: 110 ALVFEHVNNTDFKQ----------LYQTLTDYDIRFYMYEILKALDYCH---SMGIMHRD 156
Query: 526 LKPSNVLLDKDMTA-HVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNGQVS 584
+KP NV++D + + D+GLA+F +P + V + + G P ++ Q+
Sbjct: 157 VKPHNVMIDHEHRKLRLIDWGLAEFY-----HPGQEYNVRVASRYFKG--PELLVDYQMY 209
Query: 585 ILG-DIYSYGILLLEMFTGKRP 605
D++S G +L M K P
Sbjct: 210 DYSLDMWSLGCMLASMIFRKEP 231
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 63/142 (44%), Gaps = 22/142 (15%)
Query: 466 ALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCD 525
ALVFE ++N + Q ++ L+ ++ ALDY H I H D
Sbjct: 108 ALVFEHVNNTDFKQ----------LYQTLTDYDIRFYMYEILKALDYCH---SMGIMHRD 154
Query: 526 LKPSNVLLDKDMTA-HVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNGQVS 584
+KP NV++D + + D+GLA+F +P + V + + G P ++ Q+
Sbjct: 155 VKPHNVMIDHEHRKLRLIDWGLAEFY-----HPGQEYNVRVASRYFKG--PELLVDYQMY 207
Query: 585 ILG-DIYSYGILLLEMFTGKRP 605
D++S G +L M K P
Sbjct: 208 DYSLDMWSLGCMLASMIFRKEP 229
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 64/143 (44%), Gaps = 21/143 (14%)
Query: 467 LVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDL 526
++ E M G L + + + ++ + I R D+ +A+ +LH H IAH D+
Sbjct: 84 IIMECMEGGELFSRIQERGDQAFTEREAAEIMR-----DIGTAIQFLHSH---NIAHRDV 135
Query: 527 KPSNVLL---DKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNGQ- 582
KP N+L +KD + DFG AK E + N + + Y+ PE + +
Sbjct: 136 KPENLLYTSKEKDAVLKLTDFGFAK---ETTQNALQTPCY------TPYYVAPEVLGPEK 186
Query: 583 VSILGDIYSYGILLLEMFTGKRP 605
D++S G+++ + G P
Sbjct: 187 YDKSCDMWSLGVIMYILLCGFPP 209
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 63/142 (44%), Gaps = 22/142 (15%)
Query: 466 ALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCD 525
ALVFE ++N + Q ++ L+ ++ ALDY H I H D
Sbjct: 110 ALVFEHVNNTDFKQ----------LYQTLTDYDIRFYMYEILKALDYCH---SMGIMHRD 156
Query: 526 LKPSNVLLDKDMTA-HVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNGQVS 584
+KP NV++D + + D+GLA+F +P + V + + G P ++ Q+
Sbjct: 157 VKPHNVMIDHEHRKLRLIDWGLAEFY-----HPGQEYNVRVASRYFKG--PELLVDYQMY 209
Query: 585 ILG-DIYSYGILLLEMFTGKRP 605
D++S G +L M K P
Sbjct: 210 DYSLDMWSLGCMLASMIFRKEP 231
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 99/230 (43%), Gaps = 37/230 (16%)
Query: 389 DNFSKENLIGTGSFGSVYK------GTLGDGTIVAIKVLKLQQQGALKSFID-ECNALKS 441
D + +G+G F V K G + + K ++G + I+ E + LK
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 442 TRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLN 501
+H N++ + E L+ E ++ G L +L AE + + L
Sbjct: 71 IQHPNVITLHEVY-----ENKTDVILILELVAGGELFDFL----AEKESLTEEEATEFLK 121
Query: 502 IAIDVASALDYLHHHCDTPIAHCDLKPSNV-LLDKDMTA---HVGDFGLA-KFLFEISDN 556
+ + + YLH IAH DLKP N+ LLD+++ + DFGLA K F N
Sbjct: 122 ---QILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF---GN 172
Query: 557 PSKNQTVSIGLKGSIGYIPPEHMNGQ-VSILGDIYSYGILLLEMFTGKRP 605
KN + G+ ++ PE +N + + + D++S G++ + +G P
Sbjct: 173 EFKN------IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 63/142 (44%), Gaps = 22/142 (15%)
Query: 466 ALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCD 525
ALVFE ++N + Q ++ L+ ++ ALDY H I H D
Sbjct: 109 ALVFEHVNNTDFKQ----------LYQTLTDYDIRFYMYEILKALDYCH---SMGIMHRD 155
Query: 526 LKPSNVLLDKDMTA-HVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNGQVS 584
+KP NV++D + + D+GLA+F +P + V + + G P ++ Q+
Sbjct: 156 VKPHNVMIDHEHRKLRLIDWGLAEFY-----HPGQEYNVRVASRYFKG--PELLVDYQMY 208
Query: 585 ILG-DIYSYGILLLEMFTGKRP 605
D++S G +L M K P
Sbjct: 209 DYSLDMWSLGCMLASMIFRKEP 230
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 63/142 (44%), Gaps = 22/142 (15%)
Query: 466 ALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCD 525
ALVFE ++N + Q ++ L+ ++ ALDY H I H D
Sbjct: 110 ALVFEHVNNTDFKQ----------LYQTLTDYDIRFYMYEILKALDYCH---SMGIMHRD 156
Query: 526 LKPSNVLLDKDMTA-HVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNGQVS 584
+KP NV++D + + D+GLA+F +P + V + + G P ++ Q+
Sbjct: 157 VKPHNVMIDHEHRKLRLIDWGLAEFY-----HPGQEYNVRVASRYFKG--PELLVDYQMY 209
Query: 585 ILG-DIYSYGILLLEMFTGKRP 605
D++S G +L M K P
Sbjct: 210 DYSLDMWSLGCMLASMIFRKEP 231
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 63/142 (44%), Gaps = 22/142 (15%)
Query: 466 ALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCD 525
ALVFE ++N + Q ++ L+ ++ ALDY H I H D
Sbjct: 110 ALVFEHVNNTDFKQ----------LYQTLTDYDIRFYMYEILKALDYCH---SMGIMHRD 156
Query: 526 LKPSNVLLDKDMTA-HVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNGQVS 584
+KP NV++D + + D+GLA+F +P + V + + G P ++ Q+
Sbjct: 157 VKPHNVMIDHEHRKLRLIDWGLAEFY-----HPGQEYNVRVASRYFKG--PELLVDYQMY 209
Query: 585 ILG-DIYSYGILLLEMFTGKRP 605
D++S G +L M K P
Sbjct: 210 DYSLDMWSLGCMLASMIFRKEP 231
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 99/230 (43%), Gaps = 37/230 (16%)
Query: 389 DNFSKENLIGTGSFGSVYK------GTLGDGTIVAIKVLKLQQQGALKSFID-ECNALKS 441
D + +G+G F V K G + + K ++G + I+ E + LK
Sbjct: 11 DYYDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 442 TRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLN 501
+H N++ + E L+ E ++ G L +L AE + + L
Sbjct: 71 IQHPNVITLHEVY-----ENKTDVILILELVAGGELFDFL----AEKESLTEEEATEFLK 121
Query: 502 IAIDVASALDYLHHHCDTPIAHCDLKPSNV-LLDKDMTA---HVGDFGLA-KFLFEISDN 556
+ + + YLH IAH DLKP N+ LLD+++ + DFGLA K F N
Sbjct: 122 ---QILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF---GN 172
Query: 557 PSKNQTVSIGLKGSIGYIPPEHMNGQ-VSILGDIYSYGILLLEMFTGKRP 605
KN + G+ ++ PE +N + + + D++S G++ + +G P
Sbjct: 173 EFKN------IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 63/142 (44%), Gaps = 22/142 (15%)
Query: 466 ALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCD 525
ALVFE ++N + Q ++ L+ ++ ALDY H I H D
Sbjct: 109 ALVFEHVNNTDFKQ----------LYQTLTDYDIRFYMYEILKALDYCH---SMGIMHRD 155
Query: 526 LKPSNVLLDKDMTA-HVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNGQVS 584
+KP NV++D + + D+GLA+F +P + V + + G P ++ Q+
Sbjct: 156 VKPHNVMIDHEHRKLRLIDWGLAEFY-----HPGQEYNVRVASRYFKG--PELLVDYQMY 208
Query: 585 ILG-DIYSYGILLLEMFTGKRP 605
D++S G +L M K P
Sbjct: 209 DYSLDMWSLGCMLASMIFRKEP 230
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 95/249 (38%), Gaps = 83/249 (33%)
Query: 397 IGTGSFGSVYK--GTLGDGTIVAIKVL----KLQQQGALKSFIDECNALKSTRHRN---- 446
+G G+FG V + + VA+K++ K ++ L E N LK + ++
Sbjct: 36 LGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARL-----EINVLKKIKEKDKENK 90
Query: 447 ILRVITA---------CSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVI 497
L V+ + C + +L G + FEF+ N P P H +
Sbjct: 91 FLCVLMSDWFNFHGHMCIAFELLGKN----TFEFLKENNFQ----PYPLPHVR------- 135
Query: 498 QRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLL-------------------DKDMT 538
++A + AL +LH + + H DLKP N+L K+ +
Sbjct: 136 ---HMAYQLCHALRFLH---ENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTS 189
Query: 539 AHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNGQVSILG-----DIYSYG 593
V DFG A F E + T + + Y PPE + LG D++S G
Sbjct: 190 IRVADFGSATFDHE-------HHTTIVATR---HYRPPE----VILELGWAQPCDVWSIG 235
Query: 594 ILLLEMFTG 602
+L E + G
Sbjct: 236 CILFEYYRG 244
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 99/230 (43%), Gaps = 37/230 (16%)
Query: 389 DNFSKENLIGTGSFGSVYK------GTLGDGTIVAIKVLKLQQQGALKSFID-ECNALKS 441
D + +G+G F V K G + + K ++G + I+ E + LK
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 442 TRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLN 501
+H N++ + E L+ E ++ G L +L AE + + L
Sbjct: 71 IQHPNVITLHEVY-----ENKTDVILILELVAGGELFDFL----AEKESLTEEEATEFLK 121
Query: 502 IAIDVASALDYLHHHCDTPIAHCDLKPSNV-LLDKDMTA---HVGDFGLA-KFLFEISDN 556
+ + + YLH IAH DLKP N+ LLD+++ + DFGLA K F N
Sbjct: 122 ---QILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF---GN 172
Query: 557 PSKNQTVSIGLKGSIGYIPPEHMNGQ-VSILGDIYSYGILLLEMFTGKRP 605
KN + G+ ++ PE +N + + + D++S G++ + +G P
Sbjct: 173 EFKN------IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 63/142 (44%), Gaps = 22/142 (15%)
Query: 466 ALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCD 525
ALVFE ++N + Q ++ L+ ++ ALDY H I H D
Sbjct: 110 ALVFEHVNNTDFKQ----------LYQTLTDYDIRFYMYEILKALDYCH---SMGIMHRD 156
Query: 526 LKPSNVLLDKDMTA-HVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNGQVS 584
+KP NV++D + + D+GLA+F +P + V + + G P ++ Q+
Sbjct: 157 VKPHNVMIDHEHRKLRLIDWGLAEFY-----HPGQEYNVRVASRYFKG--PELLVDYQMY 209
Query: 585 ILG-DIYSYGILLLEMFTGKRP 605
D++S G +L M K P
Sbjct: 210 DYSLDMWSLGCMLASMIFRKEP 231
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 100/230 (43%), Gaps = 34/230 (14%)
Query: 389 DNFSKENLIGTGSFGSVYKGTLGD-GTIVAIKVLKLQQQGA--------LKSFIDECNAL 439
D + +IG G+F V + + G A+K++ + + + LK C+ L
Sbjct: 24 DVYELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML 83
Query: 440 KSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQR 499
K H +I+ ++ SS + +VFEFM +L + + + +
Sbjct: 84 K---HPHIVELLETYSS-----DGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHY 135
Query: 500 LNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLL-DKDMTAHV--GDFGLAKFLFEISDN 556
+ + AL Y H D I H D+KP NVLL K+ +A V GDFG+A L E
Sbjct: 136 MR---QILEALRYCH---DNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGE---- 185
Query: 557 PSKNQTVSIGLKGSIGYIPPEHMNGQ-VSILGDIYSYGILLLEMFTGKRP 605
+ V+ G G+ ++ PE + + D++ G++L + +G P
Sbjct: 186 ---SGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLP 232
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 95/249 (38%), Gaps = 83/249 (33%)
Query: 397 IGTGSFGSVYK--GTLGDGTIVAIKVL----KLQQQGALKSFIDECNALKSTRHRN---- 446
+G G+FG V + + VA+K++ K ++ L E N LK + ++
Sbjct: 59 LGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARL-----EINVLKKIKEKDKENK 113
Query: 447 ILRVITA---------CSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVI 497
L V+ + C + +L G + FEF+ N P P H +
Sbjct: 114 FLCVLMSDWFNFHGHMCIAFELLGKN----TFEFLKENNFQ----PYPLPHVR------- 158
Query: 498 QRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLL-------------------DKDMT 538
++A + AL +LH + + H DLKP N+L K+ +
Sbjct: 159 ---HMAYQLCHALRFLH---ENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTS 212
Query: 539 AHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNGQVSILG-----DIYSYG 593
V DFG A F E + T + + Y PPE + LG D++S G
Sbjct: 213 IRVADFGSATFDHE-------HHTTIVATR---HYRPPE----VILELGWAQPCDVWSIG 258
Query: 594 ILLLEMFTG 602
+L E + G
Sbjct: 259 CILFEYYRG 267
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 63/142 (44%), Gaps = 22/142 (15%)
Query: 466 ALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCD 525
ALVFE ++N + Q ++ L+ ++ ALDY H I H D
Sbjct: 115 ALVFEHVNNTDFKQ----------LYQTLTDYDIRFYMYEILKALDYCH---SMGIMHRD 161
Query: 526 LKPSNVLLDKDMTA-HVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNGQVS 584
+KP NV++D + + D+GLA+F +P + V + + G P ++ Q+
Sbjct: 162 VKPHNVMIDHEHRKLRLIDWGLAEFY-----HPGQEYNVRVASRYFKG--PELLVDYQMY 214
Query: 585 ILG-DIYSYGILLLEMFTGKRP 605
D++S G +L M K P
Sbjct: 215 DYSLDMWSLGCMLASMIFRKEP 236
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 95/249 (38%), Gaps = 83/249 (33%)
Query: 397 IGTGSFGSVYK--GTLGDGTIVAIKVL----KLQQQGALKSFIDECNALKSTRHRN---- 446
+G G+FG V + + VA+K++ K ++ L E N LK + ++
Sbjct: 27 LGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARL-----EINVLKKIKEKDKENK 81
Query: 447 ILRVITA---------CSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVI 497
L V+ + C + +L G + FEF+ N P P H +
Sbjct: 82 FLCVLMSDWFNFHGHMCIAFELLGKN----TFEFLKENNFQ----PYPLPHVR------- 126
Query: 498 QRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLL-------------------DKDMT 538
++A + AL +LH + + H DLKP N+L K+ +
Sbjct: 127 ---HMAYQLCHALRFLH---ENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTS 180
Query: 539 AHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNGQVSILG-----DIYSYG 593
V DFG A F E + T + + Y PPE + LG D++S G
Sbjct: 181 IRVADFGSATFDHE-------HHTTIVATR---HYRPPE----VILELGWAQPCDVWSIG 226
Query: 594 ILLLEMFTG 602
+L E + G
Sbjct: 227 CILFEYYRG 235
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 9/85 (10%)
Query: 523 HCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIG-LKGSIGYIPPEHMN- 580
H D+KP N+L+ D A++ DFG+A + + +G G++ Y PE +
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASAT-------TDEKLTQLGNTVGTLYYXAPERFSE 209
Query: 581 GQVSILGDIYSYGILLLEMFTGKRP 605
+ DIY+ +L E TG P
Sbjct: 210 SHATYRADIYALTCVLYECLTGSPP 234
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 100/237 (42%), Gaps = 48/237 (20%)
Query: 389 DNFSKENLIGTGSFGSVYKGTLGDGTI--VAIKVLKLQQQGALKSFIDECNALKSTRHRN 446
D + +G+G+ G V K T VAIK++ +++ A+ S + AL
Sbjct: 10 DEYIMSKTLGSGACGEV-KLAFERKTCKKVAIKIIS-KRKFAIGSAREADPALNVETEIE 67
Query: 447 ILRVITACSSVDLEGNDFKA----LVFEFMSNGNL------DQWLHPSPAEHYQFKKLSV 496
IL+ + + ++ N F A +V E M G L ++ L + + Y ++ L
Sbjct: 68 ILKKLNHPCIIKIK-NFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLA 126
Query: 497 IQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLL---DKDMTAHVGDFGLAKFLFEI 553
+Q YLH + I H DLKP NVLL ++D + DFG +K L E
Sbjct: 127 VQ-------------YLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET 170
Query: 554 SDNPSKNQTVSIGLKGSIGYIPPEHMNGQVSILG-----DIYSYGILLLEMFTGKRP 605
S + L G+ Y+ PE + V G D +S G++L +G P
Sbjct: 171 S--------LMRTLCGTPTYLAPEVLVS-VGTAGYNRAVDCWSLGVILFICLSGYPP 218
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 100/237 (42%), Gaps = 48/237 (20%)
Query: 389 DNFSKENLIGTGSFGSVYKGTLGDGTI--VAIKVLKLQQQGALKSFIDECNALKSTRHRN 446
D + +G+G+ G V K T VAIK++ +++ A+ S + AL
Sbjct: 10 DEYIMSKTLGSGACGEV-KLAFERKTCKKVAIKIIS-KRKFAIGSAREADPALNVETEIE 67
Query: 447 ILRVITACSSVDLEGNDFKA----LVFEFMSNGNL------DQWLHPSPAEHYQFKKLSV 496
IL+ + + ++ N F A +V E M G L ++ L + + Y ++ L
Sbjct: 68 ILKKLNHPCIIKIK-NFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLA 126
Query: 497 IQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLL---DKDMTAHVGDFGLAKFLFEI 553
+Q YLH + I H DLKP NVLL ++D + DFG +K L E
Sbjct: 127 VQ-------------YLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET 170
Query: 554 SDNPSKNQTVSIGLKGSIGYIPPEHMNGQVSILG-----DIYSYGILLLEMFTGKRP 605
S + L G+ Y+ PE + V G D +S G++L +G P
Sbjct: 171 S--------LMRTLCGTPTYLAPEVLVS-VGTAGYNRAVDCWSLGVILFICLSGYPP 218
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 100/237 (42%), Gaps = 48/237 (20%)
Query: 389 DNFSKENLIGTGSFGSVYKGTLGDGTI--VAIKVLKLQQQGALKSFIDECNALKSTRHRN 446
D + +G+G+ G V K T VAIK++ +++ A+ S + AL
Sbjct: 9 DEYIMSKTLGSGACGEV-KLAFERKTCKKVAIKIIS-KRKFAIGSAREADPALNVETEIE 66
Query: 447 ILRVITACSSVDLEGNDFKA----LVFEFMSNGNL------DQWLHPSPAEHYQFKKLSV 496
IL+ + + ++ N F A +V E M G L ++ L + + Y ++ L
Sbjct: 67 ILKKLNHPCIIKIK-NFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLA 125
Query: 497 IQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLL---DKDMTAHVGDFGLAKFLFEI 553
+Q YLH + I H DLKP NVLL ++D + DFG +K L E
Sbjct: 126 VQ-------------YLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET 169
Query: 554 SDNPSKNQTVSIGLKGSIGYIPPEHMNGQVSILG-----DIYSYGILLLEMFTGKRP 605
S + L G+ Y+ PE + V G D +S G++L +G P
Sbjct: 170 S--------LMRTLCGTPTYLAPEVLVS-VGTAGYNRAVDCWSLGVILFICLSGYPP 217
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 100/226 (44%), Gaps = 24/226 (10%)
Query: 386 KSTDNFSKENLIGTGSFGSVYKGT-LGDGTIVAIKVLKLQQQGALKSFIDECNALKSTRH 444
K D F E + G G+FG+V G G VAIK + +Q + L H
Sbjct: 20 KEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKV-IQDPRFRNRELQIMQDLAVLHH 78
Query: 445 RNILRVITACSSV-DLEGND-FKALVFEFMSNGNLDQWLHPSPAEHY--QFKKLSVIQRL 500
NI+++ + ++ + + D + +V E++ + LH +Y Q ++ ++
Sbjct: 79 PNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDT-----LHRCCRNYYRRQVAPPPILIKV 133
Query: 501 NIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDK-DMTAHVGDFGLAKFLFEISDNPSK 559
+ + ++ LH + H D+KP NVL+++ D T + DFG AK L +PS+
Sbjct: 134 FL-FQLIRSIGCLHLP-SVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKL-----SPSE 186
Query: 560 NQTVSIGLKGSIGYIPPEHM--NGQVSILGDIYSYGILLLEMFTGK 603
I S Y PE + N + DI+S G + EM G+
Sbjct: 187 PNVAYI---CSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGE 229
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.137 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,072,878
Number of Sequences: 62578
Number of extensions: 746187
Number of successful extensions: 4060
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 539
Number of HSP's successfully gapped in prelim test: 599
Number of HSP's that attempted gapping in prelim test: 2211
Number of HSP's gapped (non-prelim): 1286
length of query: 717
length of database: 14,973,337
effective HSP length: 106
effective length of query: 611
effective length of database: 8,340,069
effective search space: 5095782159
effective search space used: 5095782159
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)