Query 005045
Match_columns 717
No_of_seqs 551 out of 4522
Neff 9.8
Searched_HMMs 46136
Date Thu Mar 28 17:09:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005045.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/005045hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00113 leucine-rich repeat r 100.0 8.4E-80 1.8E-84 736.4 44.5 632 11-709 213-955 (968)
2 KOG0581 Mitogen-activated prot 100.0 3.4E-45 7.3E-50 356.3 16.3 257 386-701 76-335 (364)
3 KOG1187 Serine/threonine prote 100.0 1.2E-44 2.7E-49 375.8 19.4 290 376-707 62-354 (361)
4 KOG0192 Tyrosine kinase specif 100.0 2.7E-43 5.8E-48 362.5 19.9 265 386-711 38-309 (362)
5 KOG0575 Polo-like serine/threo 100.0 1.2E-43 2.6E-48 365.4 15.8 247 389-701 18-269 (592)
6 KOG0595 Serine/threonine-prote 100.0 1.6E-43 3.6E-48 347.1 15.9 204 385-611 6-219 (429)
7 KOG0615 Serine/threonine prote 100.0 6E-44 1.3E-48 349.4 12.2 252 388-701 171-437 (475)
8 PLN00113 leucine-rich repeat r 100.0 6.7E-43 1.5E-47 418.4 23.3 358 10-375 188-568 (968)
9 KOG0591 NIMA (never in mitosis 100.0 2.9E-44 6.3E-49 334.2 7.8 264 385-703 15-283 (375)
10 KOG4194 Membrane glycoprotein 100.0 4.2E-44 9.2E-49 363.1 4.4 352 7-367 73-429 (873)
11 KOG0593 Predicted protein kina 100.0 7.7E-43 1.7E-47 328.0 11.8 268 389-700 2-283 (396)
12 KOG0197 Tyrosine kinases [Sign 100.0 1.4E-42 3E-47 354.4 14.3 265 381-708 198-464 (468)
13 KOG0661 MAPK related serine/th 100.0 1.7E-42 3.6E-47 345.2 12.0 278 388-701 9-291 (538)
14 KOG0598 Ribosomal protein S6 k 100.0 1.4E-41 3.1E-46 331.0 18.0 202 386-609 22-228 (357)
15 KOG0592 3-phosphoinositide-dep 100.0 4.4E-41 9.4E-46 340.3 18.7 257 385-700 69-337 (604)
16 KOG0582 Ste20-like serine/thre 100.0 9.2E-41 2E-45 330.2 16.3 268 383-700 20-292 (516)
17 KOG2345 Serine/threonine prote 100.0 4.4E-41 9.6E-46 307.9 11.4 281 381-705 13-300 (302)
18 KOG0198 MEKK and related serin 100.0 1.1E-40 2.4E-45 331.9 13.9 261 388-705 16-280 (313)
19 KOG4194 Membrane glycoprotein 100.0 8.9E-42 1.9E-46 346.3 6.1 353 11-373 53-410 (873)
20 KOG0578 p21-activated serine/t 100.0 1.3E-40 2.8E-45 340.3 12.5 252 385-700 269-522 (550)
21 KOG1026 Nerve growth factor re 100.0 2.2E-40 4.8E-45 354.6 14.3 265 387-707 484-764 (774)
22 KOG0600 Cdc2-related protein k 100.0 4.1E-40 8.8E-45 330.6 15.2 278 386-700 114-399 (560)
23 KOG4721 Serine/threonine prote 100.0 2.7E-40 5.8E-45 334.1 13.2 254 383-709 118-372 (904)
24 KOG0193 Serine/threonine prote 100.0 2.3E-40 5E-45 339.1 12.8 271 378-709 381-657 (678)
25 KOG0659 Cdk activating kinase 100.0 9E-40 2E-44 302.4 13.1 273 389-701 2-281 (318)
26 KOG0605 NDR and related serine 100.0 4.1E-39 8.8E-44 326.6 18.1 211 385-610 137-392 (550)
27 cd05102 PTKc_VEGFR3 Catalytic 100.0 1.3E-38 2.8E-43 335.7 22.4 270 385-708 3-337 (338)
28 KOG0616 cAMP-dependent protein 100.0 4.5E-39 9.7E-44 302.2 16.6 201 386-611 41-246 (355)
29 KOG0585 Ca2+/calmodulin-depend 100.0 2.4E-39 5.1E-44 322.2 15.4 270 377-703 85-374 (576)
30 KOG0583 Serine/threonine prote 100.0 5.7E-39 1.2E-43 334.1 17.5 255 385-706 13-279 (370)
31 KOG0663 Protein kinase PITSLRE 100.0 7.7E-39 1.7E-43 305.1 13.3 280 384-700 71-360 (419)
32 KOG0611 Predicted serine/threo 100.0 6.8E-39 1.5E-43 311.8 13.1 247 387-701 51-303 (668)
33 KOG0201 Serine/threonine prote 100.0 7.4E-40 1.6E-44 323.9 6.0 250 386-700 10-262 (467)
34 KOG0660 Mitogen-activated prot 100.0 2.3E-38 5E-43 307.3 14.8 287 384-700 17-309 (359)
35 KOG0597 Serine-threonine prote 100.0 6.5E-39 1.4E-43 324.4 10.7 245 389-700 2-250 (808)
36 KOG1095 Protein tyrosine kinas 100.0 3.4E-38 7.4E-43 350.4 15.7 270 388-713 691-969 (1025)
37 PHA02988 hypothetical protein; 100.0 1.3E-37 2.7E-42 318.8 18.3 250 395-707 26-281 (283)
38 KOG1989 ARK protein kinase fam 100.0 4.6E-38 9.9E-43 338.8 15.3 281 379-711 27-317 (738)
39 KOG0588 Serine/threonine prote 100.0 6.4E-38 1.4E-42 323.9 13.5 249 387-702 10-264 (786)
40 KOG0658 Glycogen synthase kina 100.0 1E-38 2.2E-43 310.2 6.7 283 387-706 22-313 (364)
41 cd06649 PKc_MEK2 Catalytic dom 100.0 2.2E-37 4.7E-42 324.9 17.1 199 388-609 4-205 (331)
42 cd05612 STKc_PRKX_like Catalyt 100.0 1.8E-37 3.9E-42 319.5 15.2 244 389-701 1-254 (291)
43 cd05096 PTKc_DDR1 Catalytic do 100.0 6.1E-37 1.3E-41 318.0 19.1 268 387-703 3-303 (304)
44 cd07859 STKc_TDY_MAPK_plant Ca 100.0 2.5E-37 5.5E-42 326.2 16.0 280 390-701 1-290 (338)
45 KOG0594 Protein kinase PCTAIRE 100.0 2.5E-37 5.4E-42 301.7 14.5 281 388-701 10-302 (323)
46 KOG0589 Serine/threonine prote 100.0 5.2E-38 1.1E-42 320.2 10.1 251 388-701 3-258 (426)
47 cd07871 STKc_PCTAIRE3 Catalyti 100.0 2.9E-37 6.2E-42 317.6 15.4 201 388-610 4-208 (288)
48 cd05106 PTKc_CSF-1R Catalytic 100.0 1.1E-36 2.5E-41 323.8 19.2 267 385-706 34-373 (374)
49 PTZ00263 protein kinase A cata 100.0 3.2E-37 7E-42 323.1 14.7 197 388-609 17-218 (329)
50 PHA03212 serine/threonine kina 100.0 1.5E-36 3.3E-41 323.8 19.9 277 387-700 90-375 (391)
51 KOG0610 Putative serine/threon 100.0 8.6E-37 1.9E-41 299.8 16.3 264 382-700 70-391 (459)
52 cd05148 PTKc_Srm_Brk Catalytic 100.0 6.5E-37 1.4E-41 310.6 16.2 257 386-705 3-261 (261)
53 cd05631 STKc_GRK4 Catalytic do 100.0 9.4E-37 2E-41 313.2 17.5 251 390-701 1-261 (285)
54 cd07869 STKc_PFTAIRE1 Catalyti 100.0 4E-37 8.7E-42 319.1 14.6 202 387-610 3-208 (303)
55 cd05571 STKc_PKB Catalytic dom 100.0 6.2E-37 1.3E-41 320.2 15.8 240 395-700 1-250 (323)
56 cd05064 PTKc_EphR_A10 Catalyti 100.0 8.8E-37 1.9E-41 310.3 16.5 255 388-705 4-265 (266)
57 KOG4257 Focal adhesion tyrosin 100.0 5.1E-37 1.1E-41 313.5 14.5 256 390-709 390-653 (974)
58 KOG0694 Serine/threonine prote 100.0 6E-37 1.3E-41 319.5 15.2 205 384-611 363-573 (694)
59 KOG0667 Dual-specificity tyros 100.0 2.4E-37 5.2E-42 322.8 12.2 287 390-701 187-502 (586)
60 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 8.1E-37 1.8E-41 321.1 16.0 252 389-701 1-257 (333)
61 cd05054 PTKc_VEGFR Catalytic d 100.0 2.3E-36 5E-41 317.2 19.2 270 384-707 2-335 (337)
62 KOG0033 Ca2+/calmodulin-depend 100.0 2.4E-37 5.2E-42 282.3 10.1 251 387-700 9-266 (355)
63 cd05104 PTKc_Kit Catalytic dom 100.0 2.2E-36 4.8E-41 321.9 19.2 266 385-705 31-374 (375)
64 cd07848 STKc_CDKL5 Catalytic d 100.0 1.2E-36 2.7E-41 313.1 16.5 273 389-700 1-283 (287)
65 cd05072 PTKc_Lyn Catalytic dom 100.0 1.3E-36 2.7E-41 308.4 16.1 257 385-704 2-260 (261)
66 cd07862 STKc_CDK6 Catalytic do 100.0 1.6E-36 3.5E-41 312.7 17.0 275 389-700 1-286 (290)
67 cd06650 PKc_MEK1 Catalytic dom 100.0 2.7E-36 5.9E-41 316.5 18.5 199 388-609 4-205 (333)
68 KOG0194 Protein tyrosine kinas 100.0 1.1E-36 2.4E-41 316.8 14.3 268 380-710 148-425 (474)
69 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 3E-36 6.6E-41 309.7 17.4 276 388-706 3-284 (284)
70 cd05595 STKc_PKB_beta Catalyti 100.0 2.9E-36 6.2E-41 315.0 17.3 240 395-700 1-250 (323)
71 cd08228 STKc_Nek6 Catalytic do 100.0 3.3E-36 7.2E-41 306.5 17.4 260 389-706 2-266 (267)
72 cd05585 STKc_YPK1_like Catalyt 100.0 1.9E-36 4E-41 315.1 15.8 191 397-609 1-196 (312)
73 cd05114 PTKc_Tec_Rlk Catalytic 100.0 3E-36 6.4E-41 304.7 16.8 250 389-702 4-255 (256)
74 cd05048 PTKc_Ror Catalytic Dom 100.0 3.6E-36 7.7E-41 309.1 17.6 261 388-704 4-282 (283)
75 cd05052 PTKc_Abl Catalytic dom 100.0 5.5E-36 1.2E-40 304.1 18.1 256 387-705 4-262 (263)
76 PTZ00426 cAMP-dependent protei 100.0 1.5E-36 3.2E-41 318.6 14.3 199 386-609 27-231 (340)
77 cd05093 PTKc_TrkB Catalytic do 100.0 3.8E-36 8.2E-41 309.5 17.0 266 388-709 4-283 (288)
78 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 5.3E-36 1.2E-40 307.6 17.9 271 389-706 3-282 (283)
79 cd05593 STKc_PKB_gamma Catalyt 100.0 3.5E-36 7.7E-41 314.9 16.8 241 395-701 1-251 (328)
80 KOG1094 Discoidin domain recep 100.0 1.5E-36 3.2E-41 308.4 13.4 265 387-705 536-804 (807)
81 cd05049 PTKc_Trk Catalytic dom 100.0 3.3E-36 7.2E-41 308.8 15.9 260 388-703 4-279 (280)
82 cd05068 PTKc_Frk_like Catalyti 100.0 5.1E-36 1.1E-40 304.0 16.7 256 386-704 3-260 (261)
83 KOG0584 Serine/threonine prote 100.0 3.3E-36 7.1E-41 311.0 15.3 247 392-700 43-295 (632)
84 KOG0444 Cytoskeletal regulator 100.0 3.4E-39 7.5E-44 329.3 -6.6 339 13-366 10-351 (1255)
85 cd05033 PTKc_EphR Catalytic do 100.0 7.8E-36 1.7E-40 303.5 18.0 256 388-705 3-265 (266)
86 cd05094 PTKc_TrkC Catalytic do 100.0 9.2E-36 2E-40 307.1 18.7 267 387-709 3-286 (291)
87 PLN00034 mitogen-activated pro 100.0 6.9E-36 1.5E-40 316.4 18.3 251 385-701 70-328 (353)
88 cd05108 PTKc_EGFR Catalytic do 100.0 5.3E-36 1.1E-40 312.6 17.0 258 388-708 6-271 (316)
89 PTZ00267 NIMA-related protein 100.0 4.7E-36 1E-40 329.1 16.9 254 388-700 66-322 (478)
90 cd05071 PTKc_Src Catalytic dom 100.0 1.1E-35 2.5E-40 301.4 18.3 255 387-705 4-260 (262)
91 KOG0580 Serine/threonine prote 100.0 8E-37 1.7E-41 278.8 8.4 249 387-701 20-273 (281)
92 cd05062 PTKc_IGF-1R Catalytic 100.0 7.2E-36 1.6E-40 305.7 16.3 263 385-703 2-276 (277)
93 KOG4279 Serine/threonine prote 100.0 5.4E-37 1.2E-41 316.5 7.8 243 396-700 582-831 (1226)
94 cd05584 STKc_p70S6K Catalytic 100.0 8.9E-36 1.9E-40 311.5 16.7 241 394-700 1-255 (323)
95 cd06646 STKc_MAP4K5 Catalytic 100.0 5.2E-36 1.1E-40 305.0 14.5 255 387-702 7-266 (267)
96 cd05573 STKc_ROCK_NDR_like Cat 100.0 3.3E-36 7.1E-41 319.2 13.5 255 389-701 1-285 (350)
97 cd05059 PTKc_Tec_like Catalyti 100.0 9.4E-36 2E-40 301.0 16.2 251 388-702 3-255 (256)
98 cd05614 STKc_MSK2_N N-terminal 100.0 1.1E-35 2.4E-40 312.4 17.3 199 390-609 1-210 (332)
99 cd07863 STKc_CDK4 Catalytic do 100.0 1.2E-35 2.6E-40 306.0 17.2 274 390-700 1-284 (288)
100 cd05587 STKc_cPKC Catalytic do 100.0 1.2E-35 2.6E-40 310.8 17.4 198 390-609 1-204 (324)
101 cd05105 PTKc_PDGFR_alpha Catal 100.0 2.5E-35 5.3E-40 314.5 20.0 269 383-706 31-398 (400)
102 cd06615 PKc_MEK Catalytic doma 100.0 2.3E-35 5E-40 306.4 19.3 283 389-703 1-289 (308)
103 cd05084 PTKc_Fes Catalytic dom 100.0 1.3E-35 2.7E-40 299.4 16.8 247 395-703 1-251 (252)
104 cd05113 PTKc_Btk_Bmx Catalytic 100.0 1.3E-35 2.8E-40 299.9 16.9 251 389-703 4-256 (256)
105 cd05589 STKc_PKN Catalytic dom 100.0 1.2E-35 2.6E-40 310.8 17.0 196 391-609 1-204 (324)
106 KOG0574 STE20-like serine/thre 100.0 6.1E-38 1.3E-42 294.0 -0.5 251 387-701 31-283 (502)
107 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 4E-35 8.7E-40 298.5 20.2 260 389-706 2-266 (267)
108 KOG0196 Tyrosine kinase, EPH ( 100.0 3.7E-37 8.1E-42 322.8 5.3 258 390-708 630-894 (996)
109 PTZ00283 serine/threonine prot 100.0 1.3E-35 2.8E-40 325.4 17.6 266 382-701 25-297 (496)
110 cd06638 STKc_myosinIIIA Cataly 100.0 1.8E-35 3.9E-40 304.4 17.5 270 378-702 7-284 (286)
111 PTZ00284 protein kinase; Provi 100.0 1.8E-35 3.9E-40 324.5 18.5 282 382-700 122-437 (467)
112 cd08229 STKc_Nek7 Catalytic do 100.0 1.6E-35 3.4E-40 301.5 16.8 260 389-706 2-266 (267)
113 KOG0599 Phosphorylase kinase g 100.0 2.7E-36 5.9E-41 279.5 9.9 251 388-701 16-283 (411)
114 cd07872 STKc_PCTAIRE2 Catalyti 100.0 7.4E-36 1.6E-40 310.5 14.5 273 389-700 6-285 (309)
115 cd05599 STKc_NDR_like Catalyti 100.0 1.1E-35 2.5E-40 316.6 16.1 206 389-609 1-242 (364)
116 PTZ00036 glycogen synthase kin 100.0 8.4E-36 1.8E-40 323.2 15.2 276 387-701 64-351 (440)
117 cd06654 STKc_PAK1 Catalytic do 100.0 1.9E-35 4.1E-40 305.2 17.0 254 384-701 15-270 (296)
118 cd05594 STKc_PKB_alpha Catalyt 100.0 6E-36 1.3E-40 313.2 13.5 242 395-701 1-252 (325)
119 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 2.2E-35 4.8E-40 299.1 17.2 255 386-704 3-259 (260)
120 cd05053 PTKc_FGFR Catalytic do 100.0 1.8E-35 3.9E-40 305.5 16.8 268 383-706 6-292 (293)
121 cd05596 STKc_ROCK Catalytic do 100.0 1.8E-35 3.9E-40 314.4 17.2 259 381-701 35-304 (370)
122 cd07876 STKc_JNK2 Catalytic do 100.0 2.8E-35 6.1E-40 312.7 18.5 202 387-609 19-225 (359)
123 cd05036 PTKc_ALK_LTK Catalytic 100.0 1.9E-35 4.2E-40 302.4 16.6 262 386-703 3-276 (277)
124 cd05591 STKc_nPKC_epsilon Cata 100.0 1.3E-35 2.9E-40 310.1 15.7 193 395-609 1-199 (321)
125 cd05063 PTKc_EphR_A2 Catalytic 100.0 2.8E-35 6E-40 299.8 17.7 257 388-705 4-267 (268)
126 cd05626 STKc_LATS2 Catalytic d 100.0 1.7E-35 3.7E-40 316.5 16.9 205 390-609 2-251 (381)
127 cd05590 STKc_nPKC_eta Catalyti 100.0 1.3E-35 2.8E-40 309.6 15.6 193 395-609 1-199 (320)
128 cd06645 STKc_MAP4K3 Catalytic 100.0 1.7E-35 3.6E-40 301.3 15.8 252 388-700 8-264 (267)
129 cd05067 PTKc_Lck_Blk Catalytic 100.0 1.9E-35 4E-40 299.7 16.1 256 385-704 2-259 (260)
130 cd05588 STKc_aPKC Catalytic do 100.0 1.5E-35 3.2E-40 310.5 15.5 193 395-609 1-199 (329)
131 cd05598 STKc_LATS Catalytic do 100.0 1E-35 2.2E-40 318.2 14.5 206 389-609 1-247 (376)
132 cd05056 PTKc_FAK Catalytic dom 100.0 4E-35 8.7E-40 299.0 18.1 258 387-708 4-268 (270)
133 cd05043 PTK_Ryk Pseudokinase d 100.0 2.8E-35 6E-40 301.9 17.0 269 385-708 2-279 (280)
134 cd05607 STKc_GRK7 Catalytic do 100.0 4.5E-35 9.7E-40 299.5 18.4 247 397-703 1-252 (277)
135 cd05605 STKc_GRK4_like Catalyt 100.0 3.7E-35 8.1E-40 301.4 17.9 251 390-701 1-261 (285)
136 cd05628 STKc_NDR1 Catalytic do 100.0 3.2E-35 6.9E-40 312.4 17.8 206 389-609 1-239 (363)
137 cd05111 PTK_HER3 Pseudokinase 100.0 5.9E-35 1.3E-39 299.0 19.0 257 388-707 6-270 (279)
138 cd05608 STKc_GRK1 Catalytic do 100.0 6.8E-35 1.5E-39 298.6 19.5 247 397-701 1-257 (280)
139 cd05621 STKc_ROCK2 Catalytic d 100.0 1.5E-35 3.2E-40 314.6 15.0 207 381-609 35-250 (370)
140 PF07714 Pkinase_Tyr: Protein 100.0 2.5E-36 5.4E-41 305.4 8.7 249 393-702 3-259 (259)
141 cd05618 STKc_aPKC_iota Catalyt 100.0 1.5E-35 3.4E-40 310.2 14.9 192 395-608 1-198 (329)
142 cd05035 PTKc_Axl_like Catalyti 100.0 5.9E-35 1.3E-39 298.3 18.8 263 391-705 1-272 (273)
143 KOG0596 Dual specificity; seri 100.0 2.6E-35 5.6E-40 298.4 15.8 256 384-700 356-626 (677)
144 KOG0444 Cytoskeletal regulator 100.0 4.5E-38 9.7E-43 321.2 -4.2 345 5-366 23-374 (1255)
145 cd08529 STKc_FA2-like Catalyti 100.0 6.2E-35 1.3E-39 295.2 18.7 249 390-701 1-253 (256)
146 cd05616 STKc_cPKC_beta Catalyt 100.0 2.4E-35 5.2E-40 308.4 16.2 198 390-609 1-204 (323)
147 cd05098 PTKc_FGFR1 Catalytic d 100.0 3.9E-35 8.4E-40 304.8 17.6 270 384-709 13-303 (307)
148 cd05089 PTKc_Tie1 Catalytic do 100.0 5.9E-35 1.3E-39 301.9 18.9 263 389-710 2-280 (297)
149 cd05592 STKc_nPKC_theta_delta 100.0 2.8E-35 6.1E-40 306.5 16.5 193 395-609 1-199 (316)
150 cd05115 PTKc_Zap-70 Catalytic 100.0 5.2E-35 1.1E-39 295.6 17.9 248 396-705 2-255 (257)
151 cd05095 PTKc_DDR2 Catalytic do 100.0 5E-35 1.1E-39 302.4 18.2 268 387-703 3-295 (296)
152 cd05629 STKc_NDR_like_fungal C 100.0 2.3E-35 5E-40 315.4 16.1 206 389-609 1-251 (377)
153 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 4.1E-35 8.8E-40 301.2 17.3 273 389-705 4-283 (284)
154 cd05034 PTKc_Src_like Catalyti 100.0 2.8E-35 6E-40 298.6 15.8 256 386-704 3-260 (261)
155 cd05075 PTKc_Axl Catalytic dom 100.0 5.6E-35 1.2E-39 298.3 18.0 263 391-705 1-271 (272)
156 cd05045 PTKc_RET Catalytic dom 100.0 6.9E-35 1.5E-39 300.5 18.8 262 390-707 1-288 (290)
157 cd05088 PTKc_Tie2 Catalytic do 100.0 4.2E-35 9.2E-40 303.7 17.1 269 387-714 5-289 (303)
158 cd05601 STKc_CRIK Catalytic do 100.0 1.3E-35 2.9E-40 311.5 13.5 251 389-700 1-262 (330)
159 cd05570 STKc_PKC Catalytic dom 100.0 3E-35 6.5E-40 306.8 16.0 240 395-700 1-251 (318)
160 cd05082 PTKc_Csk Catalytic dom 100.0 4.8E-35 1E-39 295.9 17.0 250 388-705 5-256 (256)
161 cd05101 PTKc_FGFR2 Catalytic d 100.0 5.3E-35 1.1E-39 303.4 17.8 269 384-708 10-299 (304)
162 cd05625 STKc_LATS1 Catalytic d 100.0 3.1E-35 6.8E-40 314.9 16.6 205 390-609 2-251 (382)
163 cd05620 STKc_nPKC_delta Cataly 100.0 2.9E-35 6.2E-40 306.5 15.8 193 395-609 1-199 (316)
164 cd06644 STKc_STK10_LOK Catalyt 100.0 6.3E-35 1.4E-39 301.1 18.2 253 386-700 9-268 (292)
165 PRK13184 pknD serine/threonine 100.0 4.6E-35 1E-39 328.3 18.5 271 389-708 2-293 (932)
166 cd05090 PTKc_Ror1 Catalytic do 100.0 4.9E-35 1.1E-39 300.5 17.2 261 388-704 4-282 (283)
167 cd06611 STKc_SLK_like Catalyti 100.0 3.3E-35 7.1E-40 301.3 15.9 253 387-701 3-262 (280)
168 cd05582 STKc_RSK_N N-terminal 100.0 7.4E-36 1.6E-40 311.6 11.3 194 394-609 1-201 (318)
169 cd05109 PTKc_HER2 Catalytic do 100.0 5.4E-35 1.2E-39 299.5 17.5 258 388-708 6-271 (279)
170 cd05066 PTKc_EphR_A Catalytic 100.0 4.6E-35 1E-39 298.0 16.8 257 388-705 3-266 (267)
171 cd08227 PK_STRAD_alpha Pseudok 100.0 2.1E-35 4.5E-40 309.6 14.5 205 393-610 2-214 (327)
172 cd05092 PTKc_TrkA Catalytic do 100.0 3E-35 6.5E-40 301.5 15.3 260 388-703 4-279 (280)
173 cd06625 STKc_MEKK3_like Cataly 100.0 9.6E-35 2.1E-39 295.0 18.9 252 389-701 2-260 (263)
174 KOG4278 Protein tyrosine kinas 100.0 2E-35 4.4E-40 301.3 13.8 263 382-707 260-525 (1157)
175 cd05619 STKc_nPKC_theta Cataly 100.0 3.5E-35 7.7E-40 305.6 16.0 240 395-700 1-247 (316)
176 cd05116 PTKc_Syk Catalytic dom 100.0 5.7E-35 1.2E-39 295.5 17.1 246 396-704 2-254 (257)
177 cd05575 STKc_SGK Catalytic dom 100.0 2.8E-35 6E-40 307.9 15.2 193 395-609 1-199 (323)
178 cd06637 STKc_TNIK Catalytic do 100.0 5.7E-35 1.2E-39 298.3 17.1 258 385-700 2-268 (272)
179 cd08219 STKc_Nek3 Catalytic do 100.0 2.4E-35 5.1E-40 298.0 14.1 249 390-701 1-252 (255)
180 cd05091 PTKc_Ror2 Catalytic do 100.0 3.7E-35 8E-40 301.4 15.7 261 388-704 4-282 (283)
181 cd05069 PTKc_Yes Catalytic dom 100.0 7E-35 1.5E-39 295.4 17.6 254 387-704 4-259 (260)
182 cd05602 STKc_SGK1 Catalytic do 100.0 2.2E-35 4.8E-40 308.9 13.9 240 395-700 1-246 (325)
183 cd05103 PTKc_VEGFR2 Catalytic 100.0 1E-34 2.2E-39 306.0 19.0 269 386-708 4-342 (343)
184 cd07853 STKc_NLK Catalytic dom 100.0 3.7E-35 7.9E-40 313.2 15.8 204 390-610 1-209 (372)
185 cd06655 STKc_PAK2 Catalytic do 100.0 5.4E-35 1.2E-39 301.7 16.5 255 382-700 12-268 (296)
186 cd05060 PTKc_Syk_like Catalyti 100.0 8.3E-35 1.8E-39 294.3 17.5 249 395-706 1-256 (257)
187 cd05065 PTKc_EphR_B Catalytic 100.0 7.8E-35 1.7E-39 296.7 17.3 259 388-705 3-268 (269)
188 cd05097 PTKc_DDR_like Catalyti 100.0 1.3E-34 2.9E-39 299.0 19.2 268 387-703 3-294 (295)
189 PTZ00266 NIMA-related protein 100.0 4.6E-35 9.9E-40 329.5 16.8 263 381-700 5-294 (1021)
190 cd05050 PTKc_Musk Catalytic do 100.0 5E-35 1.1E-39 301.2 15.8 262 387-704 3-288 (288)
191 cd05039 PTKc_Csk_like Catalyti 100.0 1.1E-34 2.4E-39 293.3 18.0 251 387-705 4-256 (256)
192 cd07874 STKc_JNK3 Catalytic do 100.0 3.3E-35 7.2E-40 311.8 14.8 203 386-609 14-221 (355)
193 cd05032 PTKc_InsR_like Catalyt 100.0 6.7E-35 1.4E-39 298.6 16.6 262 386-703 3-276 (277)
194 cd06639 STKc_myosinIIIB Cataly 100.0 1.2E-34 2.6E-39 298.9 18.6 267 379-700 12-286 (291)
195 cd05617 STKc_aPKC_zeta Catalyt 100.0 5.3E-35 1.1E-39 306.1 16.1 193 395-609 1-199 (327)
196 cd06619 PKc_MKK5 Catalytic dom 100.0 9.6E-35 2.1E-39 297.5 17.7 250 389-701 1-253 (279)
197 cd05099 PTKc_FGFR4 Catalytic d 100.0 1.2E-34 2.6E-39 302.0 18.7 270 384-709 7-297 (314)
198 cd07868 STKc_CDK8 Catalytic do 100.0 9.2E-35 2E-39 303.7 17.8 203 394-609 6-219 (317)
199 PHA03207 serine/threonine kina 100.0 5.8E-35 1.3E-39 313.2 16.6 197 388-610 91-291 (392)
200 PHA03211 serine/threonine kina 100.0 7.4E-35 1.6E-39 314.1 17.4 196 387-608 167-364 (461)
201 cd05055 PTKc_PDGFR Catalytic d 100.0 1.7E-34 3.7E-39 298.9 19.5 261 385-705 31-301 (302)
202 cd05604 STKc_SGK3 Catalytic do 100.0 2.7E-35 5.9E-40 308.2 13.4 241 395-701 1-247 (325)
203 cd06643 STKc_SLK Catalytic dom 100.0 1.1E-34 2.4E-39 297.7 17.7 251 389-701 5-262 (282)
204 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 1.2E-34 2.5E-39 293.3 17.5 239 395-703 1-258 (258)
205 cd05622 STKc_ROCK1 Catalytic d 100.0 9.2E-35 2E-39 308.8 17.4 208 380-609 34-250 (371)
206 cd06612 STKc_MST1_2 Catalytic 100.0 1E-34 2.2E-39 293.5 17.0 249 388-700 2-252 (256)
207 cd05073 PTKc_Hck Catalytic dom 100.0 1.2E-34 2.6E-39 293.6 17.5 256 385-704 2-259 (260)
208 cd06631 STKc_YSK4 Catalytic do 100.0 1.6E-34 3.5E-39 293.7 18.3 254 390-700 1-261 (265)
209 cd05061 PTKc_InsR Catalytic do 100.0 1E-34 2.2E-39 298.9 16.8 266 385-706 2-279 (288)
210 cd07873 STKc_PCTAIRE1 Catalyti 100.0 5.8E-35 1.3E-39 302.7 15.2 273 388-700 5-285 (301)
211 cd07875 STKc_JNK1 Catalytic do 100.0 4E-35 8.8E-40 312.1 14.3 202 387-609 22-228 (364)
212 cd06656 STKc_PAK3 Catalytic do 100.0 6.4E-35 1.4E-39 301.4 15.3 253 384-700 14-268 (297)
213 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 7.2E-35 1.6E-39 299.5 15.5 273 389-705 4-283 (284)
214 cd06613 STKc_MAP4K3_like Catal 100.0 1.8E-34 3.8E-39 292.9 18.1 253 388-700 2-259 (262)
215 cd06624 STKc_ASK Catalytic dom 100.0 2.4E-34 5.2E-39 292.9 19.0 256 383-700 2-264 (268)
216 cd07861 STKc_CDK1_euk Catalyti 100.0 1.1E-34 2.4E-39 298.3 16.6 276 390-700 1-281 (285)
217 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 2.9E-34 6.4E-39 292.4 19.5 255 395-703 1-268 (269)
218 cd07878 STKc_p38beta_MAPK11 Ca 100.0 5.8E-35 1.3E-39 308.5 14.8 201 387-609 13-219 (343)
219 PHA03209 serine/threonine kina 100.0 6.7E-35 1.4E-39 308.8 15.3 190 388-606 65-256 (357)
220 cd05615 STKc_cPKC_alpha Cataly 100.0 8.8E-35 1.9E-39 303.8 15.9 198 390-609 1-204 (323)
221 cd08223 STKc_Nek4 Catalytic do 100.0 2E-34 4.4E-39 291.5 18.1 250 390-701 1-254 (257)
222 cd05107 PTKc_PDGFR_beta Cataly 100.0 3.2E-34 6.9E-39 305.8 20.2 268 384-706 32-400 (401)
223 KOG0577 Serine/threonine prote 100.0 8.8E-36 1.9E-40 302.7 7.5 249 385-701 22-278 (948)
224 KOG0579 Ste20-like serine/thre 100.0 1.8E-35 4E-40 302.2 9.7 252 387-700 30-288 (1187)
225 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 2.3E-34 5E-39 293.6 17.8 238 396-703 2-274 (274)
226 cd05051 PTKc_DDR Catalytic dom 100.0 3.6E-34 7.9E-39 296.2 19.3 268 387-703 3-295 (296)
227 cd05603 STKc_SGK2 Catalytic do 100.0 8.4E-35 1.8E-39 304.1 14.7 193 395-609 1-199 (321)
228 cd05041 PTKc_Fes_like Catalyti 100.0 2.8E-34 6.1E-39 289.4 18.0 247 395-703 1-250 (251)
229 cd05085 PTKc_Fer Catalytic dom 100.0 2.2E-34 4.8E-39 290.0 17.1 246 395-703 1-249 (250)
230 PF00069 Pkinase: Protein kina 100.0 4E-35 8.7E-40 297.2 11.6 251 391-700 1-256 (260)
231 cd06608 STKc_myosinIII_like Ca 100.0 2E-34 4.4E-39 294.7 16.9 261 385-700 2-271 (275)
232 cd05597 STKc_DMPK_like Catalyt 100.0 1.9E-34 4.2E-39 302.3 17.1 201 389-609 1-211 (331)
233 cd06636 STKc_MAP4K4_6 Catalyti 100.0 1.9E-34 4E-39 296.1 16.6 263 380-700 7-278 (282)
234 cd05630 STKc_GRK6 Catalytic do 100.0 2.6E-34 5.6E-39 295.1 17.6 251 390-701 1-261 (285)
235 KOG0472 Leucine-rich repeat pr 100.0 2.6E-38 5.7E-43 307.9 -11.2 342 11-367 115-541 (565)
236 cd06628 STKc_MAPKKK_Byr2_like 100.0 2.6E-34 5.7E-39 292.5 17.4 252 390-700 1-263 (267)
237 cd05040 PTKc_Ack_like Catalyti 100.0 3.1E-34 6.7E-39 290.2 17.8 249 395-703 1-256 (257)
238 cd05058 PTKc_Met_Ron Catalytic 100.0 2.7E-34 5.9E-39 291.5 17.4 254 395-707 1-261 (262)
239 cd05627 STKc_NDR2 Catalytic do 100.0 9.5E-35 2.1E-39 308.6 14.6 206 389-609 1-239 (360)
240 cd05112 PTKc_Itk Catalytic dom 100.0 2.5E-34 5.5E-39 290.7 17.0 251 388-702 3-255 (256)
241 KOG0032 Ca2+/calmodulin-depend 100.0 2.1E-34 4.5E-39 299.3 16.7 252 386-701 32-293 (382)
242 cd05057 PTKc_EGFR_like Catalyt 100.0 3.7E-34 8.1E-39 293.3 18.1 259 387-708 5-271 (279)
243 KOG4717 Serine/threonine prote 100.0 1.1E-34 2.4E-39 290.3 13.4 248 387-700 16-269 (864)
244 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 4.7E-34 1E-38 289.4 18.4 238 395-702 1-261 (262)
245 cd05100 PTKc_FGFR3 Catalytic d 100.0 4.1E-34 8.8E-39 300.7 18.0 271 383-709 6-297 (334)
246 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 2E-34 4.4E-39 296.0 15.3 263 388-704 4-269 (284)
247 cd08221 STKc_Nek9 Catalytic do 100.0 4.5E-34 9.8E-39 288.8 17.5 249 390-701 1-253 (256)
248 cd08218 STKc_Nek1 Catalytic do 100.0 4.4E-34 9.5E-39 288.9 17.1 249 390-701 1-253 (256)
249 cd05044 PTKc_c-ros Catalytic d 100.0 7.4E-34 1.6E-38 289.5 18.8 253 395-703 1-268 (269)
250 cd05632 STKc_GRK5 Catalytic do 100.0 6.4E-34 1.4E-38 292.2 18.3 199 390-609 1-204 (285)
251 cd07839 STKc_CDK5 Catalytic do 100.0 1.3E-34 2.7E-39 297.7 13.0 269 390-700 1-280 (284)
252 cd06642 STKc_STK25-YSK1 Cataly 100.0 2.9E-34 6.2E-39 293.8 15.5 248 388-701 3-253 (277)
253 cd06651 STKc_MEKK3 Catalytic d 100.0 9.3E-34 2E-38 288.2 19.0 204 389-609 2-212 (266)
254 cd07847 STKc_CDKL1_4 Catalytic 100.0 3.6E-34 7.8E-39 294.7 16.1 271 389-700 1-282 (286)
255 cd05042 PTKc_Aatyk Catalytic d 100.0 8.9E-34 1.9E-38 288.9 18.7 255 395-703 1-268 (269)
256 cd06640 STKc_MST4 Catalytic do 100.0 7E-34 1.5E-38 290.9 17.8 248 388-701 3-253 (277)
257 cd05047 PTKc_Tie Catalytic dom 100.0 5.3E-34 1.1E-38 290.6 16.6 253 395-706 1-269 (270)
258 cd07867 STKc_CDC2L6 Catalytic 100.0 1E-33 2.2E-38 295.9 19.0 202 395-609 7-219 (317)
259 cd00192 PTKc Catalytic domain 100.0 1.1E-33 2.5E-38 286.8 18.9 253 395-703 1-262 (262)
260 cd07832 STKc_CCRK Catalytic do 100.0 7.2E-34 1.6E-38 292.4 17.6 270 390-701 1-282 (286)
261 cd05623 STKc_MRCK_alpha Cataly 100.0 4.6E-34 1E-38 299.7 16.4 201 389-609 1-211 (332)
262 cd05086 PTKc_Aatyk2 Catalytic 100.0 1.7E-33 3.6E-38 286.6 20.0 254 395-703 1-267 (268)
263 cd06609 STKc_MST3_like Catalyt 100.0 7.6E-34 1.7E-38 290.2 17.5 247 389-700 1-250 (274)
264 cd05046 PTK_CCK4 Pseudokinase 100.0 6E-34 1.3E-38 291.2 16.8 260 388-703 4-274 (275)
265 cd05110 PTKc_HER4 Catalytic do 100.0 5.2E-34 1.1E-38 295.7 16.5 258 388-708 6-271 (303)
266 cd07846 STKc_CDKL2_3 Catalytic 100.0 2.7E-34 5.9E-39 295.6 14.0 275 389-700 1-282 (286)
267 cd07849 STKc_ERK1_2_like Catal 100.0 2.9E-34 6.4E-39 302.1 14.5 282 387-701 3-292 (336)
268 cd05624 STKc_MRCK_beta Catalyt 100.0 5.5E-34 1.2E-38 298.9 16.2 201 389-609 1-211 (331)
269 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 6.3E-34 1.4E-38 292.8 16.4 253 389-701 1-262 (286)
270 cd05609 STKc_MAST Catalytic do 100.0 1E-33 2.2E-38 293.8 18.1 259 389-703 1-272 (305)
271 cd06652 STKc_MEKK2 Catalytic d 100.0 1.4E-33 2.9E-38 286.9 18.2 204 389-609 2-212 (265)
272 cd05083 PTKc_Chk Catalytic dom 100.0 5.8E-34 1.2E-38 287.6 15.3 248 387-704 4-253 (254)
273 cd06605 PKc_MAPKK Catalytic do 100.0 4.6E-34 9.9E-39 290.4 14.6 253 389-701 1-257 (265)
274 KOG0986 G protein-coupled rece 100.0 1.2E-33 2.6E-38 279.6 17.0 203 386-609 182-389 (591)
275 cd05586 STKc_Sck1_like Catalyt 100.0 1.7E-34 3.6E-39 303.1 11.7 191 397-609 1-200 (330)
276 cd08217 STKc_Nek2 Catalytic do 100.0 1.3E-33 2.8E-38 287.0 17.8 253 390-701 1-262 (265)
277 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 2E-33 4.4E-38 289.0 19.5 262 389-700 1-265 (287)
278 KOG4645 MAPKKK (MAP kinase kin 100.0 2.3E-35 5E-40 325.4 5.0 255 387-701 1233-1494(1509)
279 cd08220 STKc_Nek8 Catalytic do 100.0 8.4E-34 1.8E-38 286.8 16.0 247 390-700 1-252 (256)
280 cd07844 STKc_PCTAIRE_like Cata 100.0 4.2E-34 9.1E-39 294.9 13.9 201 388-610 4-208 (291)
281 cd06629 STKc_MAPKKK_Bck1_like 100.0 2.3E-33 4.9E-38 286.4 18.9 254 390-701 2-269 (272)
282 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 1.6E-33 3.5E-38 285.3 17.7 237 395-703 1-259 (259)
283 cd05574 STKc_phototropin_like 100.0 1.5E-33 3.2E-38 294.4 17.8 257 389-700 1-288 (316)
284 KOG0199 ACK and related non-re 100.0 1.4E-34 2.9E-39 299.5 9.5 257 388-705 109-372 (1039)
285 cd07870 STKc_PFTAIRE2 Catalyti 100.0 1.6E-33 3.5E-38 290.5 17.7 202 387-610 3-208 (291)
286 PHA03210 serine/threonine kina 100.0 2.1E-33 4.5E-38 309.1 19.6 205 387-608 146-371 (501)
287 cd06623 PKc_MAPKK_plant_like C 100.0 1.7E-33 3.8E-38 285.9 17.2 251 389-701 1-256 (264)
288 cd07860 STKc_CDK2_3 Catalytic 100.0 1.7E-33 3.7E-38 289.3 17.3 199 390-609 1-204 (284)
289 cd06647 STKc_PAK_I Catalytic d 100.0 1.4E-33 3E-38 290.9 16.5 254 384-701 14-269 (293)
290 cd06630 STKc_MEKK1 Catalytic d 100.0 2.3E-33 4.9E-38 285.8 17.9 254 390-700 1-263 (268)
291 cd06632 STKc_MEKK1_plant Catal 100.0 1.6E-33 3.5E-38 285.1 16.4 246 390-700 1-254 (258)
292 cd06658 STKc_PAK5 Catalytic do 100.0 6.5E-34 1.4E-38 293.1 13.6 250 388-701 21-272 (292)
293 cd07841 STKc_CDK7 Catalytic do 100.0 1.3E-33 2.9E-38 292.2 15.9 270 390-701 1-282 (298)
294 cd06659 STKc_PAK6 Catalytic do 100.0 8.4E-34 1.8E-38 293.0 14.2 251 387-701 19-271 (297)
295 cd07843 STKc_CDC2L1 Catalytic 100.0 1.3E-33 2.9E-38 291.4 15.5 202 388-609 4-210 (293)
296 KOG1035 eIF-2alpha kinase GCN2 100.0 7.2E-34 1.6E-38 312.2 14.1 265 385-700 475-870 (1351)
297 PHA02882 putative serine/threo 100.0 3.1E-33 6.7E-38 288.3 18.0 268 387-702 10-293 (294)
298 KOG0604 MAP kinase-activated p 100.0 1.4E-33 3E-38 265.2 13.9 256 387-700 59-321 (400)
299 cd07850 STKc_JNK Catalytic dom 100.0 9.4E-34 2E-38 300.2 14.5 202 387-609 14-220 (353)
300 cd08226 PK_STRAD_beta Pseudoki 100.0 2.1E-33 4.5E-38 294.6 16.9 204 394-610 3-214 (328)
301 KOG0666 Cyclin C-dependent kin 100.0 8.8E-34 1.9E-38 267.7 12.4 208 388-609 23-243 (438)
302 cd05074 PTKc_Tyro3 Catalytic d 100.0 3.1E-33 6.7E-38 285.6 17.6 263 391-705 1-272 (273)
303 cd06610 STKc_OSR1_SPAK Catalyt 100.0 4.2E-33 9E-38 283.6 18.4 259 389-700 1-263 (267)
304 cd06614 STKc_PAK Catalytic dom 100.0 2.4E-33 5.3E-38 288.4 16.9 256 384-702 14-271 (286)
305 cd05580 STKc_PKA Catalytic dom 100.0 3.3E-33 7.1E-38 287.9 17.8 196 389-609 1-201 (290)
306 smart00219 TyrKc Tyrosine kina 100.0 4.4E-33 9.6E-38 281.9 18.4 250 391-702 1-258 (258)
307 KOG0612 Rho-associated, coiled 100.0 6.9E-34 1.5E-38 309.8 13.2 207 381-608 67-283 (1317)
308 cd05578 STKc_Yank1 Catalytic d 100.0 1.3E-33 2.9E-38 285.7 14.4 246 390-699 1-253 (258)
309 cd07833 STKc_CDKL Catalytic do 100.0 3.6E-33 7.9E-38 287.5 17.6 278 389-700 1-284 (288)
310 cd06626 STKc_MEKK4 Catalytic d 100.0 4.5E-33 9.8E-38 282.9 18.0 253 390-700 1-260 (264)
311 KOG0586 Serine/threonine prote 100.0 1.3E-33 2.8E-38 291.7 13.8 204 383-609 50-258 (596)
312 cd06917 STKc_NAK1_like Catalyt 100.0 4.6E-33 1E-37 285.0 17.8 247 390-701 2-255 (277)
313 cd06607 STKc_TAO Catalytic dom 100.0 6.2E-33 1.3E-37 288.3 18.9 248 386-701 12-267 (307)
314 KOG3653 Transforming growth fa 100.0 9E-34 2E-38 282.7 11.8 279 388-708 209-506 (534)
315 cd06617 PKc_MKK3_6 Catalytic d 100.0 4.4E-33 9.5E-38 286.1 17.0 252 389-700 1-260 (283)
316 cd07842 STKc_CDK8_like Catalyt 100.0 1.7E-33 3.6E-38 294.2 13.9 209 390-611 1-221 (316)
317 KOG0607 MAP kinase-interacting 100.0 2.3E-33 5E-38 265.7 13.3 206 394-614 83-299 (463)
318 cd08528 STKc_Nek10 Catalytic d 100.0 7.8E-33 1.7E-37 282.0 18.4 254 390-703 1-268 (269)
319 cd07858 STKc_TEY_MAPK_plant Ca 100.0 2.4E-33 5.2E-38 295.1 15.0 285 387-705 3-297 (337)
320 cd07855 STKc_ERK5 Catalytic do 100.0 2E-33 4.3E-38 295.5 14.3 283 388-701 4-294 (334)
321 cd07845 STKc_CDK10 Catalytic d 100.0 3.2E-33 6.9E-38 290.8 15.2 204 386-609 4-212 (309)
322 cd06641 STKc_MST3 Catalytic do 100.0 8.5E-33 1.9E-37 282.9 17.9 247 389-701 4-253 (277)
323 cd08216 PK_STRAD Pseudokinase 100.0 4.6E-33 1E-37 290.4 16.2 284 393-701 6-295 (314)
324 cd06648 STKc_PAK_II Catalytic 100.0 5.9E-33 1.3E-37 285.1 16.7 247 390-700 20-268 (285)
325 KOG4250 TANK binding protein k 100.0 7E-33 1.5E-37 289.9 17.3 287 389-707 13-312 (732)
326 KOG0671 LAMMER dual specificit 100.0 1.6E-33 3.6E-38 274.2 11.7 283 387-700 87-405 (415)
327 cd07836 STKc_Pho85 Catalytic d 100.0 1.2E-32 2.6E-37 283.0 18.4 271 390-700 1-280 (284)
328 cd07831 STKc_MOK Catalytic dom 100.0 1.2E-32 2.5E-37 282.8 18.2 270 391-700 1-278 (282)
329 cd06653 STKc_MEKK3_like_1 Cata 100.0 1.5E-32 3.3E-37 279.0 18.8 252 389-700 2-260 (264)
330 cd05633 STKc_GRK3 Catalytic do 100.0 1.1E-32 2.3E-37 282.1 17.7 241 396-701 1-255 (279)
331 cd06616 PKc_MKK4 Catalytic dom 100.0 6.5E-33 1.4E-37 285.6 16.0 257 389-701 4-267 (288)
332 cd07837 STKc_CdkB_plant Cataly 100.0 1E-32 2.2E-37 285.2 17.4 208 389-609 1-215 (295)
333 PLN00009 cyclin-dependent kina 100.0 1.5E-32 3.4E-37 283.6 18.1 276 389-700 2-283 (294)
334 cd07852 STKc_MAPK15 Catalytic 100.0 9.9E-33 2.1E-37 290.7 16.9 283 387-701 5-295 (337)
335 cd06606 STKc_MAPKKK Catalytic 100.0 1.5E-32 3.2E-37 278.1 17.5 252 390-700 1-256 (260)
336 cd08225 STKc_Nek5 Catalytic do 100.0 7.6E-33 1.7E-37 280.0 15.3 248 390-700 1-253 (257)
337 cd07865 STKc_CDK9 Catalytic do 100.0 9.3E-33 2E-37 287.7 16.1 211 386-609 9-227 (310)
338 cd07835 STKc_CDK1_like Catalyt 100.0 8.8E-33 1.9E-37 283.8 15.5 198 391-609 1-203 (283)
339 cd05122 PKc_STE Catalytic doma 100.0 2.3E-32 5E-37 275.5 18.1 248 390-700 1-250 (253)
340 cd07854 STKc_MAPK4_6 Catalytic 100.0 5.3E-33 1.1E-37 293.0 13.8 206 388-609 4-222 (342)
341 KOG0690 Serine/threonine prote 100.0 4.5E-33 9.8E-38 264.1 11.4 200 388-609 167-371 (516)
342 KOG0472 Leucine-rich repeat pr 100.0 2.1E-36 4.5E-41 294.8 -11.7 361 11-392 92-541 (565)
343 cd05118 STKc_CMGC Catalytic do 100.0 9.6E-33 2.1E-37 283.6 14.5 274 391-700 1-279 (283)
344 cd07840 STKc_CDK9_like Catalyt 100.0 1.2E-32 2.7E-37 283.4 15.3 201 391-610 1-206 (287)
345 cd05577 STKc_GRK Catalytic dom 100.0 3.2E-32 6.8E-37 278.7 17.7 192 397-609 1-197 (277)
346 cd07864 STKc_CDK12 Catalytic d 100.0 1.8E-32 3.8E-37 284.4 16.0 282 386-700 4-298 (302)
347 cd05606 STKc_beta_ARK Catalyti 100.0 4.2E-32 9.1E-37 277.7 18.3 241 396-701 1-255 (278)
348 PHA03390 pk1 serine/threonine- 100.0 2E-32 4.4E-37 278.1 15.7 249 381-700 6-261 (267)
349 cd06657 STKc_PAK4 Catalytic do 100.0 2.9E-32 6.4E-37 280.6 16.9 247 390-700 21-269 (292)
350 cd08530 STKc_CNK2-like Catalyt 100.0 1.6E-32 3.6E-37 277.4 14.7 248 390-700 1-252 (256)
351 cd07834 STKc_MAPK Catalytic do 100.0 1.1E-32 2.5E-37 289.6 13.8 289 390-706 1-296 (330)
352 cd06627 STKc_Cdc7_like Catalyt 100.0 4.3E-32 9.4E-37 273.9 17.4 246 390-700 1-250 (254)
353 cd05572 STKc_cGK_PKG Catalytic 100.0 4.8E-32 1E-36 275.0 17.8 241 397-700 1-251 (262)
354 cd07838 STKc_CDK4_6_like Catal 100.0 7.6E-32 1.7E-36 277.5 19.2 275 391-700 1-283 (287)
355 cd06635 STKc_TAO1 Catalytic do 100.0 8.2E-32 1.8E-36 281.0 19.3 246 389-702 25-278 (317)
356 KOG1151 Tousled-like protein k 100.0 5.4E-33 1.2E-37 273.5 9.6 217 381-609 455-687 (775)
357 cd07866 STKc_BUR1 Catalytic do 100.0 2.4E-32 5.3E-37 284.7 15.0 213 388-610 7-231 (311)
358 cd08215 STKc_Nek Catalytic dom 100.0 7E-32 1.5E-36 273.0 17.6 250 390-700 1-254 (258)
359 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 9.8E-32 2.1E-36 281.3 18.3 278 383-701 4-288 (328)
360 KOG0983 Mitogen-activated prot 100.0 7.3E-33 1.6E-37 257.0 8.4 252 388-701 91-349 (391)
361 KOG2052 Activin A type IB rece 100.0 4.8E-32 1E-36 268.4 14.3 273 387-707 209-505 (513)
362 cd05581 STKc_PDK1 Catalytic do 100.0 4.9E-32 1.1E-36 277.8 15.1 253 389-700 1-276 (280)
363 cd07879 STKc_p38delta_MAPK13 C 100.0 4.1E-32 8.8E-37 286.3 14.5 282 388-707 14-305 (342)
364 cd06634 STKc_TAO2 Catalytic do 100.0 6.1E-32 1.3E-36 280.7 15.5 249 387-703 13-269 (308)
365 cd05611 STKc_Rim15_like Cataly 100.0 1.3E-31 2.8E-36 271.5 17.5 241 395-701 2-248 (260)
366 cd07851 STKc_p38 Catalytic dom 100.0 2.4E-32 5.1E-37 288.2 12.5 280 384-700 10-297 (343)
367 cd07830 STKc_MAK_like Catalyti 100.0 7.3E-32 1.6E-36 277.0 15.9 197 391-609 1-202 (283)
368 cd07857 STKc_MPK1 Catalytic do 100.0 7.4E-32 1.6E-36 283.3 15.7 205 390-609 1-213 (332)
369 cd05583 STKc_MSK_N N-terminal 100.0 1.2E-31 2.7E-36 276.0 17.0 254 390-704 1-266 (288)
370 PTZ00024 cyclin-dependent prot 100.0 1.2E-31 2.5E-36 282.4 16.8 278 387-700 6-312 (335)
371 cd06633 STKc_TAO3 Catalytic do 100.0 2.2E-31 4.7E-36 277.2 18.3 244 390-701 22-273 (313)
372 cd05579 STKc_MAST_like Catalyt 100.0 5.9E-32 1.3E-36 274.7 13.7 249 397-702 1-255 (265)
373 cd06618 PKc_MKK7 Catalytic dom 100.0 9.9E-32 2.1E-36 277.8 15.5 256 385-702 11-274 (296)
374 cd05613 STKc_MSK1_N N-terminal 100.0 2.8E-31 6.2E-36 273.6 18.9 198 390-608 1-210 (290)
375 KOG0669 Cyclin T-dependent kin 100.0 1.4E-32 3.1E-37 252.0 7.4 212 386-610 14-233 (376)
376 cd07877 STKc_p38alpha_MAPK14 C 100.0 8.1E-32 1.8E-36 284.2 14.1 285 380-701 8-300 (345)
377 cd07880 STKc_p38gamma_MAPK12 C 100.0 1.1E-31 2.3E-36 283.1 14.5 279 385-700 11-297 (343)
378 KOG1024 Receptor-like protein 100.0 2.1E-31 4.6E-36 258.9 15.3 291 362-710 260-560 (563)
379 KOG1025 Epidermal growth facto 100.0 1.3E-32 2.9E-37 289.6 7.5 256 390-708 697-960 (1177)
380 KOG0587 Traf2- and Nck-interac 100.0 1.9E-31 4.1E-36 284.5 14.6 266 378-700 8-281 (953)
381 KOG0662 Cyclin-dependent kinas 100.0 1.4E-31 3E-36 233.2 10.9 204 389-614 2-211 (292)
382 KOG0603 Ribosomal protein S6 k 100.0 1.4E-31 3.1E-36 278.1 13.1 239 387-700 320-562 (612)
383 cd05610 STKc_MASTL Catalytic d 100.0 3.5E-31 7.6E-36 300.3 16.8 146 388-548 3-152 (669)
384 cd07829 STKc_CDK_like Catalyti 100.0 3E-31 6.4E-36 272.4 14.6 265 391-700 1-278 (282)
385 cd08222 STKc_Nek11 Catalytic d 100.0 2.8E-31 6.1E-36 269.0 14.1 249 390-700 1-256 (260)
386 KOG1290 Serine/threonine prote 100.0 5E-31 1.1E-35 263.6 15.2 155 370-534 57-222 (590)
387 KOG0668 Casein kinase II, alph 100.0 1.4E-31 3E-36 242.3 9.0 278 387-700 36-321 (338)
388 cd05123 STKc_AGC Catalytic dom 100.0 8.4E-31 1.8E-35 263.9 15.8 235 397-697 1-240 (250)
389 KOG0614 cGMP-dependent protein 100.0 1.9E-31 4.1E-36 267.1 10.6 202 386-610 417-623 (732)
390 KOG1006 Mitogen-activated prot 100.0 4E-33 8.7E-38 257.9 -3.2 257 389-700 64-326 (361)
391 KOG0200 Fibroblast/platelet-de 100.0 1.8E-30 4E-35 289.7 16.7 268 384-707 291-581 (609)
392 cd05576 STKc_RPK118_like Catal 100.0 1.9E-30 4.1E-35 258.8 14.7 179 400-608 4-184 (237)
393 KOG0984 Mitogen-activated prot 100.0 1.5E-30 3.3E-35 232.1 9.4 219 381-618 38-264 (282)
394 KOG4236 Serine/threonine prote 100.0 4.6E-31 9.9E-36 265.1 5.5 194 394-609 569-769 (888)
395 KOG0696 Serine/threonine prote 100.0 3.5E-30 7.5E-35 251.8 10.3 205 385-611 345-555 (683)
396 KOG0608 Warts/lats-like serine 100.0 3.3E-29 7.1E-34 256.9 17.0 209 389-612 629-877 (1034)
397 KOG1027 Serine/threonine prote 100.0 6.5E-30 1.4E-34 271.5 12.2 246 391-699 511-765 (903)
398 PLN03225 Serine/threonine-prot 100.0 9.7E-30 2.1E-34 281.1 11.8 208 387-607 130-380 (566)
399 KOG0695 Serine/threonine prote 100.0 7.6E-29 1.6E-33 236.2 14.6 204 384-609 245-454 (593)
400 smart00220 S_TKc Serine/Threon 100.0 1.3E-28 2.8E-33 246.5 14.6 237 401-700 1-240 (244)
401 KOG1152 Signal transduction se 100.0 6.2E-29 1.3E-33 253.0 10.2 198 387-608 559-771 (772)
402 KOG0618 Serine/threonine phosp 100.0 8.5E-31 1.8E-35 280.7 -3.6 344 10-367 45-465 (1081)
403 PLN03224 probable serine/threo 100.0 4.6E-28 1E-32 260.5 16.5 215 385-608 141-435 (507)
404 KOG4237 Extracellular matrix p 100.0 2.1E-30 4.6E-35 252.7 -2.3 350 2-364 57-498 (498)
405 KOG0664 Nemo-like MAPK-related 100.0 1.2E-29 2.7E-34 235.3 2.0 206 389-611 53-263 (449)
406 KOG0618 Serine/threonine phosp 99.9 4.6E-30 1E-34 275.1 -5.2 342 11-366 69-488 (1081)
407 KOG0665 Jun-N-terminal kinase 99.9 4.3E-28 9.3E-33 231.0 8.0 199 388-608 16-219 (369)
408 KOG0670 U4/U6-associated splic 99.9 1.6E-28 3.5E-33 246.9 3.3 302 376-700 419-745 (752)
409 KOG1167 Serine/threonine prote 99.9 9.6E-28 2.1E-32 237.5 8.7 296 384-700 31-380 (418)
410 KOG0576 Mitogen-activated prot 99.9 5.3E-28 1.2E-32 250.3 3.7 254 386-700 12-270 (829)
411 KOG1345 Serine/threonine kinas 99.9 2.7E-27 5.8E-32 219.9 7.5 211 386-622 21-241 (378)
412 KOG4237 Extracellular matrix p 99.9 1.8E-28 3.9E-33 239.3 -2.1 304 63-370 51-362 (498)
413 PLN03210 Resistant to P. syrin 99.9 4.8E-25 1E-29 264.4 25.2 338 10-365 558-904 (1153)
414 cd00180 PKc Catalytic domain o 99.9 1.1E-25 2.4E-30 219.9 16.3 209 397-701 1-214 (215)
415 PRK15387 E3 ubiquitin-protein 99.9 1.3E-25 2.7E-30 249.7 17.6 264 59-374 202-465 (788)
416 PRK15387 E3 ubiquitin-protein 99.9 2.1E-25 4.6E-30 247.8 18.0 258 12-321 203-460 (788)
417 smart00221 STYKc Protein kinas 99.9 1E-24 2.3E-29 215.5 14.9 198 391-608 1-202 (225)
418 PLN03210 Resistant to P. syrin 99.9 6.8E-24 1.5E-28 254.5 24.0 326 25-373 549-888 (1153)
419 smart00750 KIND kinase non-cat 99.9 7.3E-24 1.6E-28 200.9 14.4 169 475-708 1-172 (176)
420 PLN00181 protein SPA1-RELATED; 99.9 5.7E-24 1.2E-28 247.9 10.4 153 445-607 33-216 (793)
421 PRK15370 E3 ubiquitin-protein 99.9 2E-23 4.4E-28 233.9 14.0 278 11-358 179-461 (754)
422 KOG0195 Integrin-linked kinase 99.9 7.9E-24 1.7E-28 196.8 8.5 248 390-706 191-447 (448)
423 PRK15370 E3 ubiquitin-protein 99.9 2.4E-23 5.1E-28 233.3 12.9 265 59-369 179-447 (754)
424 PRK09188 serine/threonine prot 99.9 1.4E-22 3.1E-27 208.9 12.3 178 379-581 8-194 (365)
425 KOG1164 Casein kinase (serine/ 99.9 1.5E-21 3.3E-26 202.8 17.3 208 390-610 19-241 (322)
426 KOG1163 Casein kinase (serine/ 99.9 7.8E-22 1.7E-26 180.7 11.4 208 387-611 13-226 (341)
427 KOG1240 Protein kinase contain 99.9 8.4E-23 1.8E-27 223.1 2.4 274 363-704 2-294 (1431)
428 KOG0590 Checkpoint kinase and 99.8 2.2E-21 4.8E-26 213.7 8.2 256 392-701 321-585 (601)
429 KOG1165 Casein kinase (serine/ 99.8 5.3E-20 1.1E-24 176.5 15.1 211 383-610 22-240 (449)
430 cd00116 LRR_RI Leucine-rich re 99.8 9E-22 2E-26 205.8 0.3 259 14-295 2-291 (319)
431 PRK10359 lipopolysaccharide co 99.8 1.1E-20 2.4E-25 180.7 6.9 174 387-600 29-216 (232)
432 cd00116 LRR_RI Leucine-rich re 99.8 2E-21 4.3E-26 203.2 -0.8 108 259-366 194-319 (319)
433 COG0515 SPS1 Serine/threonine 99.8 7.5E-19 1.6E-23 185.1 18.5 205 391-610 2-215 (384)
434 KOG0617 Ras suppressor protein 99.8 1.3E-21 2.7E-26 170.0 -3.6 164 31-201 30-194 (264)
435 cd05147 RIO1_euk RIO kinase fa 99.8 1.1E-19 2.3E-24 172.7 6.7 139 394-550 2-167 (190)
436 KOG0617 Ras suppressor protein 99.8 1.6E-21 3.6E-26 169.3 -5.7 160 54-219 29-189 (264)
437 PRK12274 serine/threonine prot 99.8 4.9E-19 1.1E-23 165.3 10.1 190 392-608 5-209 (218)
438 KOG4158 BRPK/PTEN-induced prot 99.8 1.5E-18 3.2E-23 170.4 13.2 205 443-702 274-511 (598)
439 KOG1166 Mitotic checkpoint ser 99.8 7.7E-19 1.7E-23 196.8 9.8 203 380-605 689-902 (974)
440 cd05145 RIO1_like RIO kinase f 99.8 1.5E-18 3.2E-23 165.8 8.8 140 393-550 1-167 (190)
441 PF14531 Kinase-like: Kinase-l 99.8 8.8E-19 1.9E-23 172.8 6.4 209 385-610 8-254 (288)
442 KOG0603 Ribosomal protein S6 k 99.7 8.3E-19 1.8E-23 183.4 3.7 185 397-608 2-193 (612)
443 KOG1023 Natriuretic peptide re 99.7 9E-18 2E-22 176.2 10.4 218 439-707 1-226 (484)
444 PRK10345 hypothetical protein; 99.7 1.1E-16 2.4E-21 153.2 10.7 139 391-547 4-156 (210)
445 smart00090 RIO RIO-like kinase 99.7 9.2E-17 2E-21 157.9 9.2 144 387-550 26-198 (237)
446 KOG1033 eIF-2alpha kinase PEK/ 99.7 4.3E-17 9.4E-22 167.4 3.6 128 463-601 329-457 (516)
447 KOG0606 Microtubule-associated 99.6 1.4E-16 3E-21 175.0 5.6 176 383-610 77-262 (1205)
448 cd05144 RIO2_C RIO kinase fami 99.6 1.3E-15 2.8E-20 146.9 9.0 136 390-550 16-175 (198)
449 PRK14879 serine/threonine prot 99.6 1.5E-15 3.2E-20 148.4 7.9 134 395-549 2-143 (211)
450 KOG0532 Leucine-rich repeat (L 99.5 1.9E-16 4.2E-21 162.5 -3.6 180 178-374 74-253 (722)
451 TIGR03724 arch_bud32 Kae1-asso 99.5 8.2E-15 1.8E-19 141.6 7.8 130 396-549 1-138 (199)
452 KOG0532 Leucine-rich repeat (L 99.5 3.7E-16 8.1E-21 160.5 -1.7 213 62-317 54-271 (722)
453 PRK09605 bifunctional UGMP fam 99.5 1.5E-14 3.3E-19 160.8 10.6 140 385-549 329-476 (535)
454 COG4886 Leucine-rich repeat (L 99.5 2.9E-14 6.2E-19 153.4 9.5 200 38-253 97-297 (394)
455 COG4886 Leucine-rich repeat (L 99.5 2.3E-14 4.9E-19 154.2 8.7 193 86-295 97-290 (394)
456 KOG0590 Checkpoint kinase and 99.5 2.1E-15 4.6E-20 166.5 0.5 256 387-699 18-284 (601)
457 cd05119 RIO RIO kinase family, 99.5 2E-14 4.4E-19 137.4 6.9 135 394-550 2-164 (187)
458 cd05120 APH_ChoK_like Aminogly 99.5 2.3E-13 4.9E-18 125.3 10.0 135 393-549 2-138 (155)
459 PRK01723 3-deoxy-D-manno-octul 99.5 2.3E-13 5E-18 134.2 9.6 138 395-549 37-191 (239)
460 KOG1243 Protein kinase [Genera 99.4 2.5E-12 5.5E-17 136.3 11.7 167 412-605 36-202 (690)
461 KOG1259 Nischarin, modulator o 99.4 1.1E-13 2.5E-18 131.4 0.3 133 230-369 281-414 (490)
462 KOG3207 Beta-tubulin folding c 99.4 1.5E-13 3.3E-18 137.4 0.9 214 55-295 118-339 (505)
463 KOG1266 Protein kinase [Signal 99.3 9.9E-13 2.1E-17 126.9 6.3 161 438-605 120-281 (458)
464 PF14580 LRR_9: Leucine-rich r 99.3 1.1E-12 2.3E-17 120.7 5.9 120 17-143 4-126 (175)
465 KOG0531 Protein phosphatase 1, 99.3 2E-13 4.3E-18 147.0 -0.3 247 80-372 70-323 (414)
466 KOG1909 Ran GTPase-activating 99.3 5.2E-14 1.1E-18 137.1 -4.5 177 103-295 89-283 (382)
467 KOG1259 Nischarin, modulator o 99.3 7.7E-13 1.7E-17 125.8 2.0 127 204-343 285-412 (490)
468 KOG0531 Protein phosphatase 1, 99.3 2.4E-13 5.2E-18 146.3 -1.8 249 55-347 69-322 (414)
469 TIGR01982 UbiB 2-polyprenylphe 99.3 5.3E-12 1.1E-16 135.6 7.5 141 394-550 122-307 (437)
470 PF14580 LRR_9: Leucine-rich r 99.3 8.6E-12 1.9E-16 114.7 7.1 127 175-313 15-147 (175)
471 KOG0601 Cyclin-dependent kinas 99.3 4.6E-12 9.9E-17 133.5 5.7 203 388-607 113-328 (524)
472 KOG1909 Ran GTPase-activating 99.2 4.1E-13 8.8E-18 130.9 -2.5 109 259-367 186-311 (382)
473 KOG3207 Beta-tubulin folding c 99.2 1.5E-12 3.2E-17 130.5 0.1 208 127-367 118-339 (505)
474 COG4248 Uncharacterized protei 99.2 6.3E-10 1.4E-14 111.5 17.3 275 393-711 15-306 (637)
475 KOG4658 Apoptotic ATPase [Sign 99.2 1.5E-11 3.3E-16 141.0 6.6 134 5-141 515-653 (889)
476 PLN03150 hypothetical protein; 99.2 3.9E-11 8.5E-16 135.0 8.6 112 260-371 420-532 (623)
477 PLN03150 hypothetical protein; 99.2 5.1E-11 1.1E-15 134.0 9.0 109 35-143 419-528 (623)
478 cd05146 RIO3_euk RIO kinase fa 99.2 1.7E-10 3.8E-15 108.3 10.2 136 394-550 2-174 (197)
479 KOG3087 Serine/threonine prote 99.2 8.3E-11 1.8E-15 105.1 7.4 141 393-549 11-165 (229)
480 PRK04750 ubiB putative ubiquin 99.1 6.9E-11 1.5E-15 128.2 6.2 147 386-550 117-314 (537)
481 cd05151 ChoK Choline Kinase (C 99.1 1.8E-10 4E-15 108.1 7.4 131 394-549 3-136 (170)
482 COG3642 Mn2+-dependent serine/ 99.1 5.6E-10 1.2E-14 100.6 9.0 129 395-549 2-140 (204)
483 KOG4658 Apoptotic ATPase [Sign 99.0 1.2E-10 2.6E-15 133.7 5.1 183 8-195 543-733 (889)
484 PF13855 LRR_8: Leucine rich r 99.0 2.2E-10 4.7E-15 86.6 3.3 60 83-142 2-61 (61)
485 PF13855 LRR_8: Leucine rich r 99.0 4.5E-10 9.9E-15 84.9 3.4 60 59-118 2-61 (61)
486 KOG0606 Microtubule-associated 98.9 8.1E-10 1.8E-14 122.6 5.0 212 384-610 799-1039(1205)
487 COG0478 RIO-like serine/threon 98.9 3.6E-09 7.7E-14 101.3 8.0 138 388-549 90-251 (304)
488 KOG0601 Cyclin-dependent kinas 98.9 1.3E-09 2.8E-14 115.2 5.4 202 379-605 254-465 (524)
489 cd05154 ACAD10_11_like Acyl-Co 98.9 7.1E-09 1.5E-13 102.0 10.4 145 395-549 4-206 (223)
490 PF01163 RIO1: RIO1 family; I 98.9 4.5E-09 9.7E-14 98.5 7.6 124 405-550 2-156 (188)
491 KOG1859 Leucine-rich repeat pr 98.9 4.2E-11 9.1E-16 126.9 -7.6 127 233-367 164-292 (1096)
492 PRK15123 lipopolysaccharide co 98.8 4.3E-08 9.3E-13 97.7 10.7 110 431-548 74-193 (268)
493 KOG4579 Leucine-rich repeat (L 98.7 1E-09 2.3E-14 92.8 -1.9 138 234-376 28-168 (177)
494 KOG4579 Leucine-rich repeat (L 98.7 1.7E-09 3.6E-14 91.6 -1.0 142 205-354 29-170 (177)
495 KOG2982 Uncharacterized conser 98.7 2.3E-09 5E-14 102.5 -0.5 85 59-143 46-134 (418)
496 KOG1859 Leucine-rich repeat pr 98.7 4.5E-10 9.7E-15 119.3 -6.8 198 57-271 83-292 (1096)
497 KOG2982 Uncharacterized conser 98.7 3.2E-09 6.9E-14 101.6 -1.0 109 35-143 46-159 (418)
498 COG5238 RNA1 Ran GTPase-activa 98.6 4E-09 8.6E-14 99.6 -0.6 87 281-367 213-316 (388)
499 KOG2137 Protein kinase [Signal 98.6 1.6E-08 3.6E-13 108.3 2.3 101 504-606 106-209 (700)
500 PF06176 WaaY: Lipopolysacchar 98.6 4.4E-07 9.6E-12 85.6 10.9 142 387-548 29-182 (229)
No 1
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=8.4e-80 Score=736.43 Aligned_cols=632 Identities=30% Similarity=0.497 Sum_probs=470.3
Q ss_pred eecEEEcCCCcCcCCCCcCCcCCCCCCEEECCCCcccccCCcCCCCCCCCCEEEccCccccccCCccccCCCCCCEEecc
Q 005045 11 MTQDLNLTYNYLSGKIPTNLSHCTELRSFEASVNDFVGQIPNQLSSLTKLEIIGLGGSNLTGNVPAWIGNFSSLKALSLA 90 (717)
Q Consensus 11 ~~~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~ 90 (717)
++++|+|++|++.+.+|..|+.+++|++|+|++|.+++.+|..|+++++|++|+|++|.+++.+|..+.++++|++|+|+
T Consensus 213 ~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls 292 (968)
T PLN00113 213 SLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLS 292 (968)
T ss_pred CccEEECcCCccCCcCChhHhcCCCCCEEECcCceeccccChhHhCCCCCCEEECcCCeeeccCchhHhhccCcCEEECc
Confidence 67777777777777777777777777777777777777777777777777777777777776777777777777777777
Q ss_pred CCcCcccCChhhhccCCCCeEeccCCCCCCCCCccccCCCCccEEEcccCcccccCCcccccCCCCcceeeccccccccc
Q 005045 91 WNNLRGSIPNELGQLSGLGFFTLYGNFISGIIPSSIYNISSIYYFSVTQNQLHGQLPTDVGLTLPNLKIFAGAVNYFTGS 170 (717)
Q Consensus 91 ~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~l~~~~~~~l~~L~~L~l~~n~l~~~ 170 (717)
+|.+++.+|..+.++++|+.|+|++|.+.+..|..+..+++|+.|+|++|.+++.+|..+. .+++|+.|++++|.+.+.
T Consensus 293 ~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~-~~~~L~~L~Ls~n~l~~~ 371 (968)
T PLN00113 293 DNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLG-KHNNLTVLDLSTNNLTGE 371 (968)
T ss_pred CCeeccCCChhHcCCCCCcEEECCCCccCCcCChhHhcCCCCCEEECcCCCCcCcCChHHh-CCCCCcEEECCCCeeEee
Confidence 7777767777777777777777777777766777777777777777777777655555443 556666666666666555
Q ss_pred CCccCCCC------------------------CCCCEEeccCccccccCCCCccCCCCCCeeeccccccCCcccCchhhh
Q 005045 171 IPVSLSNA------------------------SNLQVLDFAENGLTGTIPGNFGSLKDLVRLNFDQNELGSREIGDLNFL 226 (717)
Q Consensus 171 ~~~~~~~l------------------------~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~ 226 (717)
.|..+..+ ++|+.|++++|++++..|..|..+++|+.|++++|.++... +
T Consensus 372 ~p~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~------~ 445 (968)
T PLN00113 372 IPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRI------N 445 (968)
T ss_pred CChhHhCcCCCCEEECcCCEecccCCHHHhCCCCCCEEECcCCEeeeECChhHhcCCCCCEEECcCCcccCcc------C
Confidence 55555444 45555555555555445555555555555555555555433 3
Q ss_pred hhhccCCCCCEEEeecCcccCcCchhhhhccccccEEecCCCccCCCCCccccCCCCCCEEEccCCcCccccchhhhcCC
Q 005045 227 KFLANCTSLEVLGLARNSFGGEMPISIANLSTHLRRLTMGENLMHGNIPVGIGNLVNLNLLGLEGNNLSGSVPEVIGRLN 306 (717)
Q Consensus 227 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 306 (717)
..+..+++|+.|+|++|.+.+.+|..+.. ++|+.|++++|++.+..|..|.++++|+.|+|++|++.+.+|..+..++
T Consensus 446 ~~~~~l~~L~~L~L~~n~~~~~~p~~~~~--~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 523 (968)
T PLN00113 446 SRKWDMPSLQMLSLARNKFFGGLPDSFGS--KRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCK 523 (968)
T ss_pred hhhccCCCCcEEECcCceeeeecCccccc--ccceEEECcCCccCCccChhhhhhhccCEEECcCCcceeeCChHHcCcc
Confidence 44556667777777777776666655432 4789999999999989999999999999999999999999999999999
Q ss_pred CCCeEEcccCcCCCCCCcccccccccceeecccccccccCCcCccCcCCCceEEeecccCCCCCCcccccC---------
Q 005045 307 KLEGLGLNVNKFSGLIPSSLGNLTILTRLWMEENRLEGSIPPSLGNCQKLLVLNLSSNDLNGTIPKEVRQS--------- 377 (717)
Q Consensus 307 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~--------- 377 (717)
+|++|+|++|.+++.+|..|..+++|+.|+|++|++++.+|..+..+++|+.|++++|+++|.+|..-...
T Consensus 524 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~~ 603 (968)
T PLN00113 524 KLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLPSTGAFLAINASAVAG 603 (968)
T ss_pred CCCEEECCCCcccccCChhHhCcccCCEEECCCCcccccCChhHhcCcccCEEeccCCcceeeCCCcchhcccChhhhcC
Confidence 99999999999999999999999999999999999999999999999999999999999998888531100
Q ss_pred -----------CCC-c-----------------------------------------ccc--------------------
Q 005045 378 -----------GMS-Y-----------------------------------------SDI-------------------- 384 (717)
Q Consensus 378 -----------~~s-~-----------------------------------------~~~-------------------- 384 (717)
..+ . ..+
T Consensus 604 n~~lc~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 683 (968)
T PLN00113 604 NIDLCGGDTTSGLPPCKRVRKTPSWWFYITCTLGAFLVLALVAFGFVFIRGRNNLELKRVENEDGTWELQFFDSKVSKSI 683 (968)
T ss_pred CccccCCccccCCCCCccccccceeeeehhHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccccccccchhh
Confidence 000 0 000
Q ss_pred --cccccccccccccCcccccceEEEEe-CCCchhhhHHhHhhhhhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCC
Q 005045 385 --SKSTDNFSKENLIGTGSFGSVYKGTL-GDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRVITACSSVDLEG 461 (717)
Q Consensus 385 --~~~~~~y~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~ 461 (717)
......|...+.||+|+||.||+|+. .+++.||+|.+..... ....|++.+++++||||+++++++..
T Consensus 684 ~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~----~~~~~~~~l~~l~HpnIv~~~~~~~~----- 754 (968)
T PLN00113 684 TINDILSSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS----IPSSEIADMGKLQHPNIVKLIGLCRS----- 754 (968)
T ss_pred hHHHHHhhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc----ccHHHHHHHhhCCCCCcceEEEEEEc-----
Confidence 00012345567899999999999996 4889999998864322 12346889999999999999999643
Q ss_pred CceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEE
Q 005045 462 NDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHV 541 (717)
Q Consensus 462 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl 541 (717)
.+..++||||+++|+|.++++ .+++..+.+++.||++|++|||..+.++|+||||||+||+++.++.+++
T Consensus 755 ~~~~~lv~Ey~~~g~L~~~l~----------~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~ 824 (968)
T PLN00113 755 EKGAYLIHEYIEGKNLSEVLR----------NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHL 824 (968)
T ss_pred CCCCEEEEeCCCCCcHHHHHh----------cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEE
Confidence 347899999999999999984 3688899999999999999999665569999999999999999888887
Q ss_pred eeeccchhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHH
Q 005045 542 GDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFV 620 (717)
Q Consensus 542 ~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~ 620 (717)
. ||.+.... ......++..|+|||++.+ .++.++|||||||++|||+||+.||+...........|.
T Consensus 825 ~-~~~~~~~~-----------~~~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~ 892 (968)
T PLN00113 825 R-LSLPGLLC-----------TDTKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWA 892 (968)
T ss_pred E-eccccccc-----------cCCCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHH
Confidence 5 65543320 0112357889999999655 589999999999999999999999965544444444554
Q ss_pred HhcCCh-hhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHH
Q 005045 621 SMALPD-HVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVV 699 (717)
Q Consensus 621 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil 699 (717)
...... ....++|+.+.... ....++..++.+++.+||+.+|++||||+||+
T Consensus 893 ~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl 945 (968)
T PLN00113 893 RYCYSDCHLDMWIDPSIRGDV---------------------------SVNQNEIVEVMNLALHCTATDPTARPCANDVL 945 (968)
T ss_pred HHhcCccchhheeCccccCCC---------------------------CccHHHHHHHHHHHHhhCcCCchhCcCHHHHH
Confidence 433322 23344444442211 01223355678999999999999999999999
Q ss_pred HHHHHHHHHH
Q 005045 700 NNLKTIRNCF 709 (717)
Q Consensus 700 ~~l~~i~~~~ 709 (717)
+.|+++.+..
T Consensus 946 ~~L~~~~~~~ 955 (968)
T PLN00113 946 KTLESASRSS 955 (968)
T ss_pred HHHHHhhccc
Confidence 9999987644
No 2
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=3.4e-45 Score=356.33 Aligned_cols=257 Identities=27% Similarity=0.406 Sum_probs=209.1
Q ss_pred ccccccccccccCcccccceEEEEeC-CCchhhhHHhHhh-hhhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCc
Q 005045 386 KSTDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQ-QQGALKSFIDECNALKSTRHRNILRVITACSSVDLEGND 463 (717)
Q Consensus 386 ~~~~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~ 463 (717)
....+.+.+..||+|..|+||+++++ +++.+|+|++... ++..++++.+|+++++++.||+||++|+.++... .
T Consensus 76 i~~~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~----~ 151 (364)
T KOG0581|consen 76 ISLSDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNG----E 151 (364)
T ss_pred cCHHHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCC----c
Confidence 44557778899999999999999976 8999999999644 4556788999999999999999999999964322 2
Q ss_pred eEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEee
Q 005045 464 FKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGD 543 (717)
Q Consensus 464 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~D 543 (717)
..+|+||||++|+|++++... +++++....+++.+|++||.|||.. .+|+||||||+||+|+..|+|||+|
T Consensus 152 ~isI~mEYMDgGSLd~~~k~~-------g~i~E~~L~~ia~~VL~GL~YLh~~--~~IIHRDIKPsNlLvNskGeVKicD 222 (364)
T KOG0581|consen 152 EISICMEYMDGGSLDDILKRV-------GRIPEPVLGKIARAVLRGLSYLHEE--RKIIHRDIKPSNLLVNSKGEVKICD 222 (364)
T ss_pred eEEeehhhcCCCCHHHHHhhc-------CCCCHHHHHHHHHHHHHHHHHHhhc--cCeeeccCCHHHeeeccCCCEEecc
Confidence 699999999999999999855 6799999999999999999999974 3999999999999999999999999
Q ss_pred eccchhcccccCCCCCCcceeecccccccccCCCccCCC-CCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHHHh
Q 005045 544 FGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNGQ-VSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVSM 622 (717)
Q Consensus 544 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~ 622 (717)
||.+..+.. .....+.||..|||||-++|. |+.++||||||++++|+.+|+.||....+......
T Consensus 223 FGVS~~lvn---------S~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~----- 288 (364)
T KOG0581|consen 223 FGVSGILVN---------SIANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIF----- 288 (364)
T ss_pred ccccHHhhh---------hhcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHH-----
Confidence 999998721 244568899999999998885 99999999999999999999999976411111111
Q ss_pred cCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHHH
Q 005045 623 ALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVNN 701 (717)
Q Consensus 623 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~~ 701 (717)
+.+..+++..-+.-+ ...|+.++..|+..||+.||.+|||++|+++.
T Consensus 289 ---~Ll~~Iv~~ppP~lP-----------------------------~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~H 335 (364)
T KOG0581|consen 289 ---ELLCAIVDEPPPRLP-----------------------------EGEFSPEFRSFVSCCLRKDPSERPSAKQLLQH 335 (364)
T ss_pred ---HHHHHHhcCCCCCCC-----------------------------cccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 112222221111110 11357889999999999999999999999864
No 3
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-44 Score=375.77 Aligned_cols=290 Identities=36% Similarity=0.639 Sum_probs=237.4
Q ss_pred cCCCCcccccccccccccccccCcccccceEEEEeCCCchhhhHHhHhhhhhHHHHHHHHHHHHhcCCCCceeEEEEeec
Q 005045 376 QSGMSYSDISKSTDNFSKENLIGTGSFGSVYKGTLGDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRVITACS 455 (717)
Q Consensus 376 ~~~~s~~~~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~ 455 (717)
...|++.++..++++|...+.||+|+||.||+|...+|+.||||.+........+.|.+|+.++.+++|||+++++++|.
T Consensus 62 ~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC~ 141 (361)
T KOG1187|consen 62 LRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYCL 141 (361)
T ss_pred cceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEEe
Confidence 34599999999999999999999999999999999888999999777554320355999999999999999999999985
Q ss_pred cccCCCCceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCC
Q 005045 456 SVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDK 535 (717)
Q Consensus 456 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~ 535 (717)
+.. ++.++|+||++.|+|.+++..... ..++|..+++||.++|+||+|||..+.+.|+||||||+|||+|+
T Consensus 142 e~~----~~~~LVYEym~nGsL~d~L~~~~~-----~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~ 212 (361)
T KOG1187|consen 142 EGG----EHRLLVYEYMPNGSLEDHLHGKKG-----EPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDE 212 (361)
T ss_pred cCC----ceEEEEEEccCCCCHHHHhCCCCC-----CCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECC
Confidence 432 268999999999999999987642 17899999999999999999999988778999999999999999
Q ss_pred CCceEEeeeccchhcccccCCCCCCcceeecccccccccCCCcc-CCCCCcccchhhHHHHHHHHHhCCCCCCCCC-CCc
Q 005045 536 DMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHM-NGQVSILGDIYSYGILLLEMFTGKRPTGDMF-KDD 613 (717)
Q Consensus 536 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~-~~~~~~~sDvwslG~vl~elltg~~p~~~~~-~~~ 613 (717)
++++||+|||+|+..... ........ .||.+|+|||+. .|..+.++|||||||++.|++||+.|.+... ...
T Consensus 213 ~~~aKlsDFGLa~~~~~~-----~~~~~~~~-~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~ 286 (361)
T KOG1187|consen 213 DFNAKLSDFGLAKLGPEG-----DTSVSTTV-MGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGE 286 (361)
T ss_pred CCCEEccCccCcccCCcc-----ccceeeec-CCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCccc
Confidence 999999999999654110 11111111 799999999996 5789999999999999999999999887654 334
Q ss_pred hhhhHHHHhcCCh-hhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCC
Q 005045 614 FSIHMFVSMALPD-HVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRER 692 (717)
Q Consensus 614 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~R 692 (717)
..+..|+...+.+ .+.+++|+.+...... ..++..++..++.+|++.+|.+|
T Consensus 287 ~~l~~w~~~~~~~~~~~eiiD~~l~~~~~~---------------------------~~~~~~~~~~~a~~C~~~~~~~R 339 (361)
T KOG1187|consen 287 LSLVEWAKPLLEEGKLREIVDPRLKEGEYP---------------------------DEKEVKKLAELALRCLRPDPKER 339 (361)
T ss_pred ccHHHHHHHHHHCcchhheeCCCccCCCCC---------------------------hHHHHHHHHHHHHHHcCcCCCcC
Confidence 4467776665555 5888999988632100 01345668999999999999999
Q ss_pred CCHHHHHHHHHHHHH
Q 005045 693 IAMNVVVNNLKTIRN 707 (717)
Q Consensus 693 ps~~eil~~l~~i~~ 707 (717)
|+|.||+++|+.+..
T Consensus 340 P~m~~Vv~~L~~~~~ 354 (361)
T KOG1187|consen 340 PTMSQVVKELEGILS 354 (361)
T ss_pred cCHHHHHHHHHhhcc
Confidence 999999999966653
No 4
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-43 Score=362.50 Aligned_cols=265 Identities=31% Similarity=0.499 Sum_probs=212.4
Q ss_pred ccccccccccccCcccccceEEEEeCCCchhhhHHhHhhhh--hHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCc
Q 005045 386 KSTDNFSKENLIGTGSFGSVYKGTLGDGTIVAIKVLKLQQQ--GALKSFIDECNALKSTRHRNILRVITACSSVDLEGND 463 (717)
Q Consensus 386 ~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~ 463 (717)
.......+.+.+|+|+||.||+|.+.....||+|.+...+. ...+.|.+|+.++.+++||||++++++|... ..
T Consensus 38 i~~~~l~~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~----~~ 113 (362)
T KOG0192|consen 38 IDPDELPIEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSP----PG 113 (362)
T ss_pred cChHHhhhhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCC----CC
Confidence 33445566677999999999999986444499999986532 2267999999999999999999999997543 22
Q ss_pred eEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCC-eeecCCCCCCEEeCCCC-ceEE
Q 005045 464 FKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTP-IAHCDLKPSNVLLDKDM-TAHV 541 (717)
Q Consensus 464 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~-ivH~dlkp~NIll~~~~-~~kl 541 (717)
..++||||+++|+|.+++.... ...+++..+..+|.|||+||.|||++ + ||||||||+||+++.++ ++||
T Consensus 114 ~~~iVtEy~~~GsL~~~l~~~~-----~~~l~~~~~l~~aldiArGm~YLH~~---~~iIHrDLK~~NiLv~~~~~~~KI 185 (362)
T KOG0192|consen 114 SLCIVTEYMPGGSLSVLLHKKR-----KRKLPLKVRLRIALDIARGMEYLHSE---GPIIHRDLKSDNILVDLKGKTLKI 185 (362)
T ss_pred ceEEEEEeCCCCcHHHHHhhcc-----cCCCCHHHHHHHHHHHHHHHHHHhcC---CCeeecccChhhEEEcCCCCEEEE
Confidence 6899999999999999998631 16899999999999999999999998 7 99999999999999998 9999
Q ss_pred eeeccchhcccccCCCCCCcceeecccccccccCCCccCCC---CCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhH
Q 005045 542 GDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNGQ---VSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHM 618 (717)
Q Consensus 542 ~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~ 618 (717)
+|||+++...... ...+...||+.|||||++.+. ++.|+||||||+++|||+||+.||...... .....
T Consensus 186 ~DFGlsr~~~~~~-------~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~-~~~~~ 257 (362)
T KOG0192|consen 186 ADFGLSREKVISK-------TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPV-QVASA 257 (362)
T ss_pred CCCccceeecccc-------ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHH-HHHHH
Confidence 9999998652110 222336799999999998853 999999999999999999999999876441 11111
Q ss_pred HHHhcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHH
Q 005045 619 FVSMALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVV 698 (717)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ei 698 (717)
.+....+ +. .+.+|+..+..++.+||..+|+.||++.||
T Consensus 258 v~~~~~R--------p~---------------------------------~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei 296 (362)
T KOG0192|consen 258 VVVGGLR--------PP---------------------------------IPKECPPHLSSLMERCWLVDPSRRPSFLEI 296 (362)
T ss_pred HHhcCCC--------CC---------------------------------CCccCCHHHHHHHHHhCCCCCCcCCCHHHH
Confidence 1111110 00 122357889999999999999999999999
Q ss_pred HHHHHHHHHHHHh
Q 005045 699 VNNLKTIRNCFLE 711 (717)
Q Consensus 699 l~~l~~i~~~~~~ 711 (717)
+..|+.+......
T Consensus 297 ~~~l~~~~~~~~~ 309 (362)
T KOG0192|consen 297 VSRLESIMSHISS 309 (362)
T ss_pred HHHHHHHHHhhcc
Confidence 9999999887654
No 5
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.2e-43 Score=365.43 Aligned_cols=247 Identities=24% Similarity=0.379 Sum_probs=207.1
Q ss_pred cccccccccCcccccceEEEEe-CCCchhhhHHhHhh---hhhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCce
Q 005045 389 DNFSKENLIGTGSFGSVYKGTL-GDGTIVAIKVLKLQ---QQGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDF 464 (717)
Q Consensus 389 ~~y~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 464 (717)
.+|...+.||+|||+.||.+++ .+|+.||+|++... ....++...+|+++.++++|||||+++.+ +++.+.
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~-----FEDs~n 92 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHF-----FEDSNN 92 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeE-----eecCCc
Confidence 6899999999999999999997 79999999999754 45567889999999999999999999999 677779
Q ss_pred EEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeee
Q 005045 465 KALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDF 544 (717)
Q Consensus 465 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Df 544 (717)
.|+|.|+|+.++|..+++++ +.+++.+++.++.||+.|+.|||+. +|+|||||-.|+|++++.+|||+||
T Consensus 93 VYivLELC~~~sL~el~Krr-------k~ltEpEary~l~QIv~GlkYLH~~---~IiHRDLKLGNlfL~~~~~VKIgDF 162 (592)
T KOG0575|consen 93 VYIVLELCHRGSLMELLKRR-------KPLTEPEARYFLRQIVEGLKYLHSL---GIIHRDLKLGNLFLNENMNVKIGDF 162 (592)
T ss_pred eEEEEEecCCccHHHHHHhc-------CCCCcHHHHHHHHHHHHHHHHHHhc---CceecccchhheeecCcCcEEeccc
Confidence 99999999999999999865 7899999999999999999999998 9999999999999999999999999
Q ss_pred ccchhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHHHhc
Q 005045 545 GLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVSMA 623 (717)
Q Consensus 545 g~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~ 623 (717)
|+|..+ ..+.....+.+||+.|.|||++.+ .++..+||||+|||+|-|+.|++||....-
T Consensus 163 GLAt~l-------e~~~Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~v------------ 223 (592)
T KOG0575|consen 163 GLATQL-------EYDGERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTV------------ 223 (592)
T ss_pred ceeeee-------cCcccccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchH------------
Confidence 999987 223344567889999999999765 489999999999999999999999965311
Q ss_pred CChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHHH
Q 005045 624 LPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVNN 701 (717)
Q Consensus 624 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~~ 701 (717)
.+.........+..+. .-+.+..+||.++|+.+|.+|||+.+|+..
T Consensus 224 ------------------------kety~~Ik~~~Y~~P~--------~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h 269 (592)
T KOG0575|consen 224 ------------------------KETYNKIKLNEYSMPS--------HLSAEAKDLIRKLLRPNPSERPSLDEVLDH 269 (592)
T ss_pred ------------------------HHHHHHHHhcCccccc--------ccCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 1111111111111111 113445789999999999999999999853
No 6
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-43 Score=347.14 Aligned_cols=204 Identities=33% Similarity=0.553 Sum_probs=181.4
Q ss_pred cccccccccccccCcccccceEEEEeC-CCchhhhHHhHhh--hhhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCC
Q 005045 385 SKSTDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQ--QQGALKSFIDECNALKSTRHRNILRVITACSSVDLEG 461 (717)
Q Consensus 385 ~~~~~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~ 461 (717)
....++|...+.||+|+|+.||+|+++ ++..||||.+... ..+.++.+..|+++++.++|||||.++++ ...
T Consensus 6 ~~~~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~-----~~~ 80 (429)
T KOG0595|consen 6 MRVVGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDC-----IED 80 (429)
T ss_pred ccccccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEE-----Eec
Confidence 345679999999999999999999965 7899999999866 45667888999999999999999999999 455
Q ss_pred CceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCC-----
Q 005045 462 NDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKD----- 536 (717)
Q Consensus 462 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~----- 536 (717)
++.+|+|||||.||+|.+|+++. +.+++..++.++.|||.|+++||++ +||||||||+||+++..
T Consensus 81 ~~~i~lVMEyC~gGDLs~yi~~~-------~~l~e~t~r~Fm~QLA~alq~L~~~---~IiHRDLKPQNiLLs~~~~~~~ 150 (429)
T KOG0595|consen 81 DDFIYLVMEYCNGGDLSDYIRRR-------GRLPEATARHFMQQLASALQFLHEN---NIIHRDLKPQNILLSTTARNDT 150 (429)
T ss_pred CCeEEEEEEeCCCCCHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCcceEEeccCCCCCC
Confidence 66999999999999999999976 6799999999999999999999998 99999999999999865
Q ss_pred -CceEEeeeccchhcccccCCCCCCcceeecccccccccCCCcc-CCCCCcccchhhHHHHHHHHHhCCCCCCCCCC
Q 005045 537 -MTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHM-NGQVSILGDIYSYGILLLEMFTGKRPTGDMFK 611 (717)
Q Consensus 537 -~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~-~~~~~~~sDvwslG~vl~elltg~~p~~~~~~ 611 (717)
-.+||+|||.|+.+. ........+|++.|||||++ .++|+.|+|+||+|+++|+|++|..||+....
T Consensus 151 ~~~LKIADFGfAR~L~--------~~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~ 219 (429)
T KOG0595|consen 151 SPVLKIADFGFARFLQ--------PGSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETP 219 (429)
T ss_pred CceEEecccchhhhCC--------chhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCH
Confidence 468999999999873 23344567899999999996 67899999999999999999999999986543
No 7
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=6e-44 Score=349.42 Aligned_cols=252 Identities=25% Similarity=0.361 Sum_probs=201.6
Q ss_pred ccccccccccCcccccceEEEE-eCCCchhhhHHhHhhhhh-------HHHHHHHHHHHHhcCCCCceeEEEEeeccccC
Q 005045 388 TDNFSKENLIGTGSFGSVYKGT-LGDGTIVAIKVLKLQQQG-------ALKSFIDECNALKSTRHRNILRVITACSSVDL 459 (717)
Q Consensus 388 ~~~y~~~~~ig~g~~g~v~~~~-~~~~~~vavK~~~~~~~~-------~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~ 459 (717)
.+.|.+.+.+|+|+||.|-+|. .++|+.||||+++..... .....++|+++|++++||+||++.++ +
T Consensus 171 ~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~-----f 245 (475)
T KOG0615|consen 171 NDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDF-----F 245 (475)
T ss_pred cceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeee-----e
Confidence 5578899999999999999999 458999999999754211 12345799999999999999999999 5
Q ss_pred CCCceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCC---
Q 005045 460 EGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKD--- 536 (717)
Q Consensus 460 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~--- 536 (717)
+.++..|+||||++||.|.+.+-.+ +.+.+...+.++.|++.|+.|||++ ||+||||||+||+++.+
T Consensus 246 ~~~ds~YmVlE~v~GGeLfd~vv~n-------k~l~ed~~K~~f~Qll~avkYLH~~---GI~HRDiKPeNILl~~~~e~ 315 (475)
T KOG0615|consen 246 EVPDSSYMVLEYVEGGELFDKVVAN-------KYLREDLGKLLFKQLLTAVKYLHSQ---GIIHRDIKPENILLSNDAED 315 (475)
T ss_pred ecCCceEEEEEEecCccHHHHHHhc-------cccccchhHHHHHHHHHHHHHHHHc---CcccccCCcceEEeccCCcc
Confidence 6667889999999999999998766 5688888899999999999999998 99999999999999865
Q ss_pred CceEEeeeccchhcccccCCCCCCcceeecccccccccCCCccCCC----CCcccchhhHHHHHHHHHhCCCCCCCCCCC
Q 005045 537 MTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNGQ----VSILGDIYSYGILLLEMFTGKRPTGDMFKD 612 (717)
Q Consensus 537 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~----~~~~sDvwslG~vl~elltg~~p~~~~~~~ 612 (717)
..+||+|||+|+.. .......+.+||+.|.|||++.++ ++.++|+||+||++|-+++|.+||.+...+
T Consensus 316 ~llKItDFGlAK~~--------g~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~ 387 (475)
T KOG0615|consen 316 CLLKITDFGLAKVS--------GEGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTD 387 (475)
T ss_pred eEEEecccchhhcc--------ccceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCC
Confidence 78999999999975 122334568899999999997654 345889999999999999999999875433
Q ss_pred chhhhHHHHhcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCC
Q 005045 613 DFSIHMFVSMALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRER 692 (717)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~R 692 (717)
.-.. .++..-+.+..+ ..-.+..++..++|.+||..||+.|
T Consensus 388 ~sl~------------eQI~~G~y~f~p---------------------------~~w~~Iseea~dlI~~mL~VdP~~R 428 (475)
T KOG0615|consen 388 PSLK------------EQILKGRYAFGP---------------------------LQWDRISEEALDLINWMLVVDPENR 428 (475)
T ss_pred ccHH------------HHHhcCcccccC---------------------------hhhhhhhHHHHHHHHHhhEeCcccC
Confidence 2111 112222222111 0112235667899999999999999
Q ss_pred CCHHHHHHH
Q 005045 693 IAMNVVVNN 701 (717)
Q Consensus 693 ps~~eil~~ 701 (717)
||+.|+++.
T Consensus 429 ~s~~eaL~h 437 (475)
T KOG0615|consen 429 PSADEALNH 437 (475)
T ss_pred cCHHHHhcC
Confidence 999999853
No 8
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=6.7e-43 Score=418.38 Aligned_cols=358 Identities=34% Similarity=0.510 Sum_probs=306.2
Q ss_pred ceecEEEcCCCcCcCCCCcCCcCCCCCCEEECCCCcccccCCcCCCCCCCCCEEEccCccccccCCccccCCCCCCEEec
Q 005045 10 LMTQDLNLTYNYLSGKIPTNLSHCTELRSFEASVNDFVGQIPNQLSSLTKLEIIGLGGSNLTGNVPAWIGNFSSLKALSL 89 (717)
Q Consensus 10 ~~~~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L 89 (717)
.++++|+|++|.+.+.+|..|+++++|+.|+|++|.+++.+|..|+++++|++|+|++|.+++.+|..|+++++|++|+|
T Consensus 188 ~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L 267 (968)
T PLN00113 188 TSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFL 267 (968)
T ss_pred cCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCccCCcCChhHhcCCCCCEEECcCceeccccChhHhCCCCCCEEEC
Confidence 38899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCcCcccCChhhhccCCCCeEeccCCCCCCCCCccccCCCCccEEEcccCcccccCCcccccCCCCcceeecccccccc
Q 005045 90 AWNNLRGSIPNELGQLSGLGFFTLYGNFISGIIPSSIYNISSIYYFSVTQNQLHGQLPTDVGLTLPNLKIFAGAVNYFTG 169 (717)
Q Consensus 90 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~l~~~~~~~l~~L~~L~l~~n~l~~ 169 (717)
++|++++.+|..+.++++|++|+|++|.+.+..|..+.++++|+.|++++|.+++.+|..+. .+++|+.|++++|.+.+
T Consensus 268 ~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~-~l~~L~~L~L~~n~l~~ 346 (968)
T PLN00113 268 YQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALT-SLPRLQVLQLWSNKFSG 346 (968)
T ss_pred cCCeeeccCchhHhhccCcCEEECcCCeeccCCChhHcCCCCCcEEECCCCccCCcCChhHh-cCCCCCEEECcCCCCcC
Confidence 99999999999999999999999999999999999999999999999999999977776554 89999999999999999
Q ss_pred cCCccCCCCCCCCEEeccCccccccCCCCccCCCCCCeeeccccccCCcccCchhhhhhhccCCCCCEEEeecCcccCcC
Q 005045 170 SIPVSLSNASNLQVLDFAENGLTGTIPGNFGSLKDLVRLNFDQNELGSREIGDLNFLKFLANCTSLEVLGLARNSFGGEM 249 (717)
Q Consensus 170 ~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 249 (717)
.+|..+..+++|+.|++++|++++..|..+..+++|+.|++++|.+.... +..+..+++|+.|++++|.+++.+
T Consensus 347 ~~p~~l~~~~~L~~L~Ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~------p~~~~~~~~L~~L~L~~n~l~~~~ 420 (968)
T PLN00113 347 EIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEI------PKSLGACRSLRRVRLQDNSFSGEL 420 (968)
T ss_pred cCChHHhCCCCCcEEECCCCeeEeeCChhHhCcCCCCEEECcCCEecccC------CHHHhCCCCCCEEECcCCEeeeEC
Confidence 99999999999999999999999888888888778888888877776544 445555556666666666555555
Q ss_pred chhhhhccccccEEecCCCccCCCCCccccC-----------------------CCCCCEEEccCCcCccccchhhhcCC
Q 005045 250 PISIANLSTHLRRLTMGENLMHGNIPVGIGN-----------------------LVNLNLLGLEGNNLSGSVPEVIGRLN 306 (717)
Q Consensus 250 p~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~-----------------------l~~L~~L~L~~N~l~~~~~~~~~~l~ 306 (717)
|..+..+ +.|+.|++++|.+.+.++..+.. .++|+.|++++|++++..|..+..++
T Consensus 421 p~~~~~l-~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~~~L~~L~ls~n~l~~~~~~~~~~l~ 499 (968)
T PLN00113 421 PSEFTKL-PLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSFGSKRLENLDLSRNQFSGAVPRKLGSLS 499 (968)
T ss_pred ChhHhcC-CCCCEEECcCCcccCccChhhccCCCCcEEECcCceeeeecCcccccccceEEECcCCccCCccChhhhhhh
Confidence 5555444 24555555555444444333322 35677777777788778888888899
Q ss_pred CCCeEEcccCcCCCCCCcccccccccceeecccccccccCCcCccCcCCCceEEeecccCCCCCCcccc
Q 005045 307 KLEGLGLNVNKFSGLIPSSLGNLTILTRLWMEENRLEGSIPPSLGNCQKLLVLNLSSNDLNGTIPKEVR 375 (717)
Q Consensus 307 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~ 375 (717)
+|+.|+|++|++++.+|..+.++++|++|+|++|.+++.+|..|..+++|+.|+|++|+++|.+|+.+.
T Consensus 500 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~ 568 (968)
T PLN00113 500 ELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLG 568 (968)
T ss_pred ccCEEECcCCcceeeCChHHcCccCCCEEECCCCcccccCChhHhCcccCCEEECCCCcccccCChhHh
Confidence 999999999999988999999999999999999999999999999999999999999999999998654
No 9
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.9e-44 Score=334.15 Aligned_cols=264 Identities=27% Similarity=0.398 Sum_probs=209.0
Q ss_pred cccccccccccccCcccccceEEEE-eCCCchhhhHHhHhh--hhhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCC
Q 005045 385 SKSTDNFSKENLIGTGSFGSVYKGT-LGDGTIVAIKVLKLQ--QQGALKSFIDECNALKSTRHRNILRVITACSSVDLEG 461 (717)
Q Consensus 385 ~~~~~~y~~~~~ig~g~~g~v~~~~-~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~ 461 (717)
.....+|+++++||+|.||+||+++ ..+|..+|.|.++-. +..+++.+..|+.+|++++||||+++++..+ .++
T Consensus 15 ~~~l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f---~~~ 91 (375)
T KOG0591|consen 15 QKTLADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSF---IED 91 (375)
T ss_pred cccHHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhh---hcc
Confidence 4556789999999999999999999 559999999999843 4566788999999999999999999998532 233
Q ss_pred CceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCC-CeeecCCCCCCEEeCCCCceE
Q 005045 462 NDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDT-PIAHCDLKPSNVLLDKDMTAH 540 (717)
Q Consensus 462 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~-~ivH~dlkp~NIll~~~~~~k 540 (717)
...++||||+|.+|+|.++++..+. +.+.+++..+++++.|++.||..+|...++ -|.||||||.|||++.+|.||
T Consensus 92 ~evlnivmE~c~~GDLsqmIk~~K~---qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvK 168 (375)
T KOG0591|consen 92 NEVLNIVMELCDAGDLSQMIKHFKK---QKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVK 168 (375)
T ss_pred chhhHHHHHhhcccCHHHHHHHHHh---ccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCcee
Confidence 4458999999999999999976533 347899999999999999999999994422 399999999999999999999
Q ss_pred EeeeccchhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHH
Q 005045 541 VGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMF 619 (717)
Q Consensus 541 l~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~ 619 (717)
|+|||+++.+. ..........|||.||+||.+.+ +|+.+|||||+||++|||+.-++||.+. .+..
T Consensus 169 LGDfGL~r~l~-------s~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~-----n~~~- 235 (375)
T KOG0591|consen 169 LGDFGLGRFLS-------SKTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGD-----NLLS- 235 (375)
T ss_pred eccchhHhHhc-------chhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccc-----cHHH-
Confidence 99999999872 22233445789999999999655 6999999999999999999999999764 1100
Q ss_pred HHhcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHH
Q 005045 620 VSMALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVV 699 (717)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil 699 (717)
+ ..++-.-..+.. ..+-++..+.++|..|+..||+.||+...++
T Consensus 236 ----L---~~KI~qgd~~~~-----------------------------p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v 279 (375)
T KOG0591|consen 236 ----L---CKKIEQGDYPPL-----------------------------PDEHYSTDLRELINMCIAVDPEQRPDTVPYV 279 (375)
T ss_pred ----H---HHHHHcCCCCCC-----------------------------cHHHhhhHHHHHHHHHccCCcccCCCcchHH
Confidence 0 001111111111 1234577889999999999999999865555
Q ss_pred HHHH
Q 005045 700 NNLK 703 (717)
Q Consensus 700 ~~l~ 703 (717)
+.+.
T Consensus 280 ~di~ 283 (375)
T KOG0591|consen 280 QDIQ 283 (375)
T ss_pred HHHH
Confidence 5443
No 10
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=4.2e-44 Score=363.10 Aligned_cols=352 Identities=21% Similarity=0.224 Sum_probs=316.4
Q ss_pred CCcc--eecEEEcCCCcCcCCCCcCCcCCCCCCEEECCCCcccccCCcCCCCCCCCCEEEccCccccccCCccccCCCCC
Q 005045 7 PEHL--MTQDLNLTYNYLSGKIPTNLSHCTELRSFEASVNDFVGQIPNQLSSLTKLEIIGLGGSNLTGNVPAWIGNFSSL 84 (717)
Q Consensus 7 p~~~--~~~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L 84 (717)
+..+ .+++|+|++|+|..+.+..|.++++|+++++.+|.++ .+|.......+|+.|+|.+|.|+.+-.+.++.++.|
T Consensus 73 ~g~lp~~t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~~~sghl~~L~L~~N~I~sv~se~L~~l~al 151 (873)
T KOG4194|consen 73 KGFLPSQTQTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELT-RIPRFGHESGHLEKLDLRHNLISSVTSEELSALPAL 151 (873)
T ss_pred CCcCccceeeeeccccccccCcHHHHhcCCcceeeeeccchhh-hcccccccccceeEEeeeccccccccHHHHHhHhhh
Confidence 4444 7888999999999999999999999999999999999 899865666679999999999998888899999999
Q ss_pred CEEeccCCcCcccCChhhhccCCCCeEeccCCCCCCCCCccccCCCCccEEEcccCcccccCCcccccCCCCcceeeccc
Q 005045 85 KALSLAWNNLRGSIPNELGQLSGLGFFTLYGNFISGIIPSSIYNISSIYYFSVTQNQLHGQLPTDVGLTLPNLKIFAGAV 164 (717)
Q Consensus 85 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~l~~~~~~~l~~L~~L~l~~ 164 (717)
++||||.|.|+.+.-.+|..-.++++|+|++|.|+.+..+.|.++.+|..|.|+.|+|+ .+|...|..+++|+.|+|..
T Consensus 152 rslDLSrN~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrit-tLp~r~Fk~L~~L~~LdLnr 230 (873)
T KOG4194|consen 152 RSLDLSRNLISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRIT-TLPQRSFKRLPKLESLDLNR 230 (873)
T ss_pred hhhhhhhchhhcccCCCCCCCCCceEEeeccccccccccccccccchheeeecccCccc-ccCHHHhhhcchhhhhhccc
Confidence 99999999999777778998899999999999999999999999999999999999998 99999998899999999999
Q ss_pred ccccccCCccCCCCCCCCEEeccCccccccCCCCccCCCCCCeeeccccccCCcccCchhhhhhhccCCCCCEEEeecCc
Q 005045 165 NYFTGSIPVSLSNASNLQVLDFAENGLTGTIPGNFGSLKDLVRLNFDQNELGSREIGDLNFLKFLANCTSLEVLGLARNS 244 (717)
Q Consensus 165 n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~ 244 (717)
|+|.....-.|.++++|+.|.|..|.|+....+.|..+.++++|+|+.|+++.+. ..++.+++.|+.|+||+|.
T Consensus 231 N~irive~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn------~g~lfgLt~L~~L~lS~Na 304 (873)
T KOG4194|consen 231 NRIRIVEGLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVN------EGWLFGLTSLEQLDLSYNA 304 (873)
T ss_pred cceeeehhhhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhhhhh------cccccccchhhhhccchhh
Confidence 9999655677999999999999999999888889999999999999999999987 5688999999999999999
Q ss_pred ccCcCchhhhhccccccEEecCCCccCCCCCccccCCCCCCEEEccCCcCccccchhhhcCCCCCeEEcccCcCCCCC--
Q 005045 245 FGGEMPISIANLSTHLRRLTMGENLMHGNIPVGIGNLVNLNLLGLEGNNLSGSVPEVIGRLNKLEGLGLNVNKFSGLI-- 322 (717)
Q Consensus 245 l~~~~p~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~-- 322 (717)
|....++++... ++|++|+|++|+|+...+..|..+..|++|+|++|+|+..-..+|.++.+|++|||++|.|+..+
T Consensus 305 I~rih~d~Wsft-qkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IED 383 (873)
T KOG4194|consen 305 IQRIHIDSWSFT-QKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIED 383 (873)
T ss_pred hheeecchhhhc-ccceeEeccccccccCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEec
Confidence 996667776665 58999999999999888888999999999999999999777778999999999999999987554
Q ss_pred -CcccccccccceeecccccccccCCcCccCcCCCceEEeecccCC
Q 005045 323 -PSSLGNLTILTRLWMEENRLEGSIPPSLGNCQKLLVLNLSSNDLN 367 (717)
Q Consensus 323 -~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 367 (717)
...|.+|++|+.|+|.||+|..+.-.+|.++++|+.|||.+|.|.
T Consensus 384 aa~~f~gl~~LrkL~l~gNqlk~I~krAfsgl~~LE~LdL~~Naia 429 (873)
T KOG4194|consen 384 AAVAFNGLPSLRKLRLTGNQLKSIPKRAFSGLEALEHLDLGDNAIA 429 (873)
T ss_pred chhhhccchhhhheeecCceeeecchhhhccCcccceecCCCCcce
Confidence 356788999999999999998555578999999999999999885
No 11
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=7.7e-43 Score=328.00 Aligned_cols=268 Identities=24% Similarity=0.335 Sum_probs=208.2
Q ss_pred cccccccccCcccccceEEEEeC-CCchhhhHHhHhh--hhhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceE
Q 005045 389 DNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQ--QQGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFK 465 (717)
Q Consensus 389 ~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~ 465 (717)
+.|+.+.++|+|+||.||+|+++ +|+.||||.+... ++...+-..+|++++++++|+|+|.++++ +......
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEV-----Frrkrkl 76 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEV-----FRRKRKL 76 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHH-----HHhccee
Confidence 46899999999999999999976 8999999999744 34556778999999999999999999999 4556699
Q ss_pred EEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeec
Q 005045 466 ALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFG 545 (717)
Q Consensus 466 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg 545 (717)
++|||||+. ++.+-+.+.+ ..++...+.+++.|++.|+.|+|++ +++||||||+||+|+.+|.+||||||
T Consensus 77 hLVFE~~dh-TvL~eLe~~p------~G~~~~~vk~~l~Q~l~ai~~cHk~---n~IHRDIKPENILit~~gvvKLCDFG 146 (396)
T KOG0593|consen 77 HLVFEYCDH-TVLHELERYP------NGVPSELVKKYLYQLLKAIHFCHKN---NCIHRDIKPENILITQNGVVKLCDFG 146 (396)
T ss_pred EEEeeecch-HHHHHHHhcc------CCCCHHHHHHHHHHHHHHhhhhhhc---CeecccCChhheEEecCCcEEeccch
Confidence 999999964 6666666554 5689999999999999999999999 99999999999999999999999999
Q ss_pred cchhcccccCCCCCCcceeecccccccccCCCccCC--CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchh--hhHHHH
Q 005045 546 LAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG--QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFS--IHMFVS 621 (717)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~--~~~~~~ 621 (717)
.|+.+..+ ....+-+..|..|+|||.+-| +|+..+||||+||++.||++|.+.|.+.++-+.. +....+
T Consensus 147 FAR~L~~p-------gd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG 219 (396)
T KOG0593|consen 147 FARTLSAP-------GDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLG 219 (396)
T ss_pred hhHhhcCC-------cchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHc
Confidence 99988432 223344678999999999766 5999999999999999999999999876544332 222223
Q ss_pred hcCChhhhhhcCCC-------CCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCC
Q 005045 622 MALPDHVMDILDPS-------MPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIA 694 (717)
Q Consensus 622 ~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps 694 (717)
..+|.. .+++... ++... ..+. -+.+.+.....+.+++..|++.||++|++
T Consensus 220 ~L~prh-q~iF~~N~~F~Gv~lP~~~--~~ep-------------------Le~k~p~~s~~~ld~~k~cL~~dP~~R~s 277 (396)
T KOG0593|consen 220 NLIPRH-QSIFSSNPFFHGVRLPEPE--HPEP-------------------LERKYPKISNVLLDLLKKCLKMDPDDRLS 277 (396)
T ss_pred ccCHHH-HHHhccCCceeeeecCCCC--Cccc-------------------hhhhcccchHHHHHHHHHHhcCCcccccc
Confidence 333333 2222221 11110 0011 11122333556899999999999999999
Q ss_pred HHHHHH
Q 005045 695 MNVVVN 700 (717)
Q Consensus 695 ~~eil~ 700 (717)
.+|++.
T Consensus 278 c~qll~ 283 (396)
T KOG0593|consen 278 CEQLLH 283 (396)
T ss_pred HHHHhc
Confidence 999983
No 12
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-42 Score=354.43 Aligned_cols=265 Identities=26% Similarity=0.474 Sum_probs=218.3
Q ss_pred cccccccccccccccccCcccccceEEEEeCCCchhhhHHhHhhhhhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCC
Q 005045 381 YSDISKSTDNFSKENLIGTGSFGSVYKGTLGDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRVITACSSVDLE 460 (717)
Q Consensus 381 ~~~~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~ 460 (717)
.+.+......++.++.||+|-||.||.|.+.....||+|.++..... ...|.+|+++|++++|++||+++++|..
T Consensus 198 ~d~wei~r~~l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~m~-~~~f~~Ea~iMk~L~H~~lV~l~gV~~~---- 272 (468)
T KOG0197|consen 198 RDPWEIPREELKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGSMS-PEAFLREAQIMKKLRHEKLVKLYGVCTK---- 272 (468)
T ss_pred cCCeeecHHHHHHHHHhcCCccceEEEEEEcCCCcccceEEeccccC-hhHHHHHHHHHHhCcccCeEEEEEEEec----
Confidence 55556667778899999999999999999987779999999865322 3678899999999999999999999743
Q ss_pred CCceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceE
Q 005045 461 GNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAH 540 (717)
Q Consensus 461 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~k 540 (717)
++.++|||||++.|+|.+|++.... ..+...+.+.++.|||+||+||+++ ++|||||.++||||+++..+|
T Consensus 273 -~~piyIVtE~m~~GsLl~yLr~~~~-----~~l~~~~Ll~~a~qIaeGM~YLes~---~~IHRDLAARNiLV~~~~~vK 343 (468)
T KOG0197|consen 273 -QEPIYIVTEYMPKGSLLDYLRTREG-----GLLNLPQLLDFAAQIAEGMAYLESK---NYIHRDLAARNILVDEDLVVK 343 (468)
T ss_pred -CCceEEEEEecccCcHHHHhhhcCC-----CccchHHHHHHHHHHHHHHHHHHhC---CccchhhhhhheeeccCceEE
Confidence 3379999999999999999997322 6789999999999999999999998 999999999999999999999
Q ss_pred EeeeccchhcccccCCCCCCcceeecccccccccCCCcc-CCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCCchhhhH
Q 005045 541 VGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHM-NGQVSILGDIYSYGILLLEMFT-GKRPTGDMFKDDFSIHM 618 (717)
Q Consensus 541 l~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~-~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~ 618 (717)
|+|||+|+... .+.+....+..-+..|.|||.+ .++++.|||||||||+||||+| |+.||.++...+.
T Consensus 344 IsDFGLAr~~~------d~~Y~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev---- 413 (468)
T KOG0197|consen 344 ISDFGLARLIG------DDEYTASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEV---- 413 (468)
T ss_pred EcccccccccC------CCceeecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHHH----
Confidence 99999999542 1222233344567789999995 5679999999999999999999 9999977633221
Q ss_pred HHHhcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHH
Q 005045 619 FVSMALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVV 698 (717)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ei 698 (717)
-+.+++... .+.++.||..+.+++..||..+|++|||++.+
T Consensus 414 ----------~~~le~GyR-----------------------------lp~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L 454 (468)
T KOG0197|consen 414 ----------LELLERGYR-----------------------------LPRPEGCPDEVYELMKSCWHEDPEDRPTFETL 454 (468)
T ss_pred ----------HHHHhccCc-----------------------------CCCCCCCCHHHHHHHHHHhhCCcccCCCHHHH
Confidence 111222211 23667889999999999999999999999999
Q ss_pred HHHHHHHHHH
Q 005045 699 VNNLKTIRNC 708 (717)
Q Consensus 699 l~~l~~i~~~ 708 (717)
...++.+...
T Consensus 455 ~~~l~~~~~~ 464 (468)
T KOG0197|consen 455 REVLEDFFTS 464 (468)
T ss_pred HHHHHHhhhc
Confidence 9999888654
No 13
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-42 Score=345.17 Aligned_cols=278 Identities=21% Similarity=0.274 Sum_probs=209.7
Q ss_pred ccccccccccCcccccceEEEEe-CCCchhhhHHhHhhhhhH-HHHHHHHHHHHhcCC-CCceeEEEEeeccccCCCCce
Q 005045 388 TDNFSKENLIGTGSFGSVYKGTL-GDGTIVAIKVLKLQQQGA-LKSFIDECNALKSTR-HRNILRVITACSSVDLEGNDF 464 (717)
Q Consensus 388 ~~~y~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~~~~-~~~~~~e~~~l~~l~-h~ni~~~~~~~~~~~~~~~~~ 464 (717)
-++|.+++++|.|.||.||+|+. .+|..||||.++..-... ...-.+|++.++++. ||||+++.+++.+ ....
T Consensus 9 m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d----~~~~ 84 (538)
T KOG0661|consen 9 MDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRD----NDRI 84 (538)
T ss_pred HHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhc----cCce
Confidence 46899999999999999999994 489999999998653322 233458999999998 9999999999633 3348
Q ss_pred EEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeee
Q 005045 465 KALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDF 544 (717)
Q Consensus 465 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Df 544 (717)
+|+||||| ..+|++.++.+. +.+++..++.|+.||++||+|+|++ |+.|||+||+|||+.....+||+||
T Consensus 85 L~fVfE~M-d~NLYqLmK~R~------r~fse~~irnim~QilqGL~hiHk~---GfFHRDlKPENiLi~~~~~iKiaDF 154 (538)
T KOG0661|consen 85 LYFVFEFM-DCNLYQLMKDRN------RLFSESDIRNIMYQILQGLAHIHKH---GFFHRDLKPENILISGNDVIKIADF 154 (538)
T ss_pred EeeeHHhh-hhhHHHHHhhcC------CcCCHHHHHHHHHHHHHHHHHHHhc---CcccccCChhheEecccceeEeccc
Confidence 99999999 589999999774 7899999999999999999999998 9999999999999999999999999
Q ss_pred ccchhcccccCCCCCCcceeecccccccccCCCcc--CCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHHHh
Q 005045 545 GLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHM--NGQVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVSM 622 (717)
Q Consensus 545 g~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~--~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~ 622 (717)
|+|+.+ ......+.+..|..|+|||++ .+-|+.+.||||+|||++|+.+-++.|.+..+-+..+.
T Consensus 155 GLARev--------~SkpPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~K----- 221 (538)
T KOG0661|consen 155 GLAREV--------RSKPPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYK----- 221 (538)
T ss_pred cccccc--------ccCCCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHH-----
Confidence 999976 233445567899999999994 34589999999999999999999999988755433221
Q ss_pred cCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHHH
Q 005045 623 ALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVNN 701 (717)
Q Consensus 623 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~~ 701 (717)
+.+++..-..... .....+.......-+.-...........++.+..+++.+|++|||++||||+|.+++
T Consensus 222 -----Ic~VLGtP~~~~~----~eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~ 291 (538)
T KOG0661|consen 222 -----ICEVLGTPDKDSW----PEGYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQH 291 (538)
T ss_pred -----HHHHhCCCccccc----hhHHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcC
Confidence 1121111111100 000111111111001111111122333467788999999999999999999999864
No 14
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-41 Score=330.98 Aligned_cols=202 Identities=32% Similarity=0.464 Sum_probs=179.3
Q ss_pred ccccccccccccCcccccceEEEEeC-CCchhhhHHhHhhh---hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCC
Q 005045 386 KSTDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQ---QGALKSFIDECNALKSTRHRNILRVITACSSVDLEG 461 (717)
Q Consensus 386 ~~~~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~ 461 (717)
...++|++++.||+|+||.||.++.+ +++.+|+|+++... ....+...+|..++.+++||.|+++... +++
T Consensus 22 ~~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ys-----FQt 96 (357)
T KOG0598|consen 22 VGPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYS-----FQT 96 (357)
T ss_pred CChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEe-----ccc
Confidence 44678999999999999999999955 79999999998653 3456788999999999999999999988 777
Q ss_pred CceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEE
Q 005045 462 NDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHV 541 (717)
Q Consensus 462 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl 541 (717)
.+.+|+|+||+.||.|.-.+++. +.+++..++.++..|+.||.|||+. |||||||||+|||++..|+++|
T Consensus 97 ~~kLylVld~~~GGeLf~hL~~e-------g~F~E~~arfYlaEi~lAL~~LH~~---gIiyRDlKPENILLd~~GHi~L 166 (357)
T KOG0598|consen 97 EEKLYLVLDYLNGGELFYHLQRE-------GRFSEDRARFYLAEIVLALGYLHSK---GIIYRDLKPENILLDEQGHIKL 166 (357)
T ss_pred CCeEEEEEeccCCccHHHHHHhc-------CCcchhHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHeeecCCCcEEE
Confidence 88999999999999999999865 6799999999999999999999997 9999999999999999999999
Q ss_pred eeeccchhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHhCCCCCCCC
Q 005045 542 GDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRPTGDM 609 (717)
Q Consensus 542 ~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~ 609 (717)
+|||+++... .......+++||+.|||||++.+ .++.++|+||+|+++|||++|.+||...
T Consensus 167 tDFgL~k~~~-------~~~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~ 228 (357)
T KOG0598|consen 167 TDFGLCKEDL-------KDGDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAE 228 (357)
T ss_pred eccccchhcc-------cCCCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCc
Confidence 9999998642 22223345789999999999554 6999999999999999999999999764
No 15
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=4.4e-41 Score=340.34 Aligned_cols=257 Identities=25% Similarity=0.391 Sum_probs=209.5
Q ss_pred cccccccccccccCcccccceEEEEeC-CCchhhhHHhHhh---hhhHHHHHHHHHHHHhcC-CCCceeEEEEeeccccC
Q 005045 385 SKSTDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQ---QQGALKSFIDECNALKST-RHRNILRVITACSSVDL 459 (717)
Q Consensus 385 ~~~~~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~~~ 459 (717)
.....+|...+.||.|+|++|++|+.+ +++.||||++... .....+....|-.+|.++ .||.|++++.. +
T Consensus 69 kk~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~T-----F 143 (604)
T KOG0592|consen 69 KKTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFT-----F 143 (604)
T ss_pred cCChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEE-----e
Confidence 566779999999999999999999954 8999999999754 334457778899999999 99999999998 6
Q ss_pred CCCceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCce
Q 005045 460 EGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTA 539 (717)
Q Consensus 460 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~ 539 (717)
.+...+|+|+||+++|.|.++|++. +.+++.-++.++.+|+.|++|||++ |||||||||+|||++.+|++
T Consensus 144 QD~~sLYFvLe~A~nGdll~~i~K~-------Gsfde~caR~YAAeIldAleylH~~---GIIHRDlKPENILLd~dmhi 213 (604)
T KOG0592|consen 144 QDEESLYFVLEYAPNGDLLDLIKKY-------GSFDETCARFYAAEILDALEYLHSN---GIIHRDLKPENILLDKDGHI 213 (604)
T ss_pred ecccceEEEEEecCCCcHHHHHHHh-------CcchHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeEcCCCcE
Confidence 6777999999999999999999865 7899999999999999999999998 99999999999999999999
Q ss_pred EEeeeccchhcccccCC------CCCCcceeecccccccccCCCccCCC-CCcccchhhHHHHHHHHHhCCCCCCCCCCC
Q 005045 540 HVGDFGLAKFLFEISDN------PSKNQTVSIGLKGSIGYIPPEHMNGQ-VSILGDIYSYGILLLEMFTGKRPTGDMFKD 612 (717)
Q Consensus 540 kl~Dfg~~~~~~~~~~~------~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~sDvwslG~vl~elltg~~p~~~~~~~ 612 (717)
+|+|||.|..+...... ..........+.||..|.+||++... .++.+|+||||||+|+|+.|.+||.+..+
T Consensus 214 kITDFGsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~Ne- 292 (604)
T KOG0592|consen 214 KITDFGSAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANE- 292 (604)
T ss_pred EEeeccccccCChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccH-
Confidence 99999999988543322 11111223568999999999997665 79999999999999999999999976421
Q ss_pred chhhhHHHHhcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCC
Q 005045 613 DFSIHMFVSMALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRER 692 (717)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~R 692 (717)
+.. +.++++-..... +..++...+|+.+.|..||.+|
T Consensus 293 -yli-----------FqkI~~l~y~fp-------------------------------~~fp~~a~dLv~KLLv~dp~~R 329 (604)
T KOG0592|consen 293 -YLI-----------FQKIQALDYEFP-------------------------------EGFPEDARDLIKKLLVRDPSDR 329 (604)
T ss_pred -HHH-----------HHHHHHhcccCC-------------------------------CCCCHHHHHHHHHHHccCcccc
Confidence 111 111222111111 1224566789999999999999
Q ss_pred CCHHHHHH
Q 005045 693 IAMNVVVN 700 (717)
Q Consensus 693 ps~~eil~ 700 (717)
+|++||-+
T Consensus 330 lt~~qIk~ 337 (604)
T KOG0592|consen 330 LTSQQIKA 337 (604)
T ss_pred ccHHHHhh
Confidence 99988765
No 16
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.2e-41 Score=330.22 Aligned_cols=268 Identities=23% Similarity=0.359 Sum_probs=213.0
Q ss_pred cccccccccccccccCcccccceEEEE-eCCCchhhhHHhHhhh-hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCC
Q 005045 383 DISKSTDNFSKENLIGTGSFGSVYKGT-LGDGTIVAIKVLKLQQ-QGALKSFIDECNALKSTRHRNILRVITACSSVDLE 460 (717)
Q Consensus 383 ~~~~~~~~y~~~~~ig~g~~g~v~~~~-~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~ 460 (717)
......+.|+..+.||.|..+.||+|+ .+.++.||||++.... ....+.+++|+..++.++||||++++..+ .
T Consensus 20 ~~p~n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sF-----v 94 (516)
T KOG0582|consen 20 EFPLNAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSF-----V 94 (516)
T ss_pred cCCCCccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEE-----E
Confidence 344567799999999999999999999 5588999999998764 33468899999999999999999999884 4
Q ss_pred CCceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceE
Q 005045 461 GNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAH 540 (717)
Q Consensus 461 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~k 540 (717)
.+..+|+||.||.+|++.++++..-. ..+.+..+..|.+++++||.|||.+ |++|||||+.||+|+.+|.||
T Consensus 95 v~~~LWvVmpfMa~GS~ldIik~~~~-----~Gl~E~~Ia~iLre~LkaL~YLH~~---G~IHRdvKAgnILi~~dG~Vk 166 (516)
T KOG0582|consen 95 VDSELWVVMPFMAGGSLLDIIKTYYP-----DGLEEASIATILREVLKALDYLHQN---GHIHRDVKAGNILIDSDGTVK 166 (516)
T ss_pred ecceeEEeehhhcCCcHHHHHHHHcc-----ccccHHHHHHHHHHHHHHHHHHHhc---CceecccccccEEEcCCCcEE
Confidence 45699999999999999999986532 4589999999999999999999998 999999999999999999999
Q ss_pred EeeeccchhcccccCCCCCCcceeecccccccccCCCcc-CC--CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhh
Q 005045 541 VGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHM-NG--QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIH 617 (717)
Q Consensus 541 l~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~-~~--~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~ 617 (717)
|+|||.+..+...+ .........+.|+++|||||++ +. .|+.|+||||||++..||.+|+.||....+-.. +.
T Consensus 167 LadFgvsa~l~~~G---~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkv-Ll 242 (516)
T KOG0582|consen 167 LADFGVSASLFDSG---DRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKV-LL 242 (516)
T ss_pred EcCceeeeeecccC---ceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHH-HH
Confidence 99999987775533 2222222677899999999994 33 489999999999999999999999987644322 22
Q ss_pred HHHHhcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHH
Q 005045 618 MFVSMALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNV 697 (717)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~e 697 (717)
.......|......++. +....+...+.+++..|++.||.+||||.+
T Consensus 243 ~tLqn~pp~~~t~~~~~---------------------------------d~~k~~~ksf~e~i~~CL~kDP~kRptAsk 289 (516)
T KOG0582|consen 243 LTLQNDPPTLLTSGLDK---------------------------------DEDKKFSKSFREMIALCLVKDPSKRPTASK 289 (516)
T ss_pred HHhcCCCCCcccccCCh---------------------------------HHhhhhcHHHHHHHHHHhhcCcccCCCHHH
Confidence 22222222111111111 112223557889999999999999999999
Q ss_pred HHH
Q 005045 698 VVN 700 (717)
Q Consensus 698 il~ 700 (717)
++.
T Consensus 290 Llk 292 (516)
T KOG0582|consen 290 LLK 292 (516)
T ss_pred Hhc
Confidence 984
No 17
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=4.4e-41 Score=307.93 Aligned_cols=281 Identities=20% Similarity=0.273 Sum_probs=219.8
Q ss_pred cccccccccccccccccCcccccceEEEE-eCCCchhhhHHhHhhhhhHHHHHHHHHHHHhcCCCCceeEEEEeeccccC
Q 005045 381 YSDISKSTDNFSKENLIGTGSFGSVYKGT-LGDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRVITACSSVDL 459 (717)
Q Consensus 381 ~~~~~~~~~~y~~~~~ig~g~~g~v~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~ 459 (717)
-..+..-.++|++.+.+|.|||+.||+++ ..+++.+|+|.+.....+..+..++|++..++++|||++++++++....-
T Consensus 13 ~~tv~In~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~ 92 (302)
T KOG2345|consen 13 RGTVIINNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEK 92 (302)
T ss_pred CCcEEEcCceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhc
Confidence 45567788999999999999999999999 56899999999987776778899999999999999999999998766555
Q ss_pred CCCceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCce
Q 005045 460 EGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTA 539 (717)
Q Consensus 460 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~ 539 (717)
+.....|++++|+..|+|.+.++.... +...+++.+++.|+.+|++||.+||+.. .+|.||||||.||++++++.+
T Consensus 93 D~~~~~yll~Pyy~~Gsl~d~i~~~k~---kg~~~sE~~iL~if~gic~gL~~lH~~~-~~yAH~DiKP~NILls~~~~~ 168 (302)
T KOG2345|consen 93 DGKHEAYLLLPYYKRGSLLDEIERLKI---KGNFVSEAQILWIFLGICRGLEALHEKE-PPYAHRDIKPANILLSDSGLP 168 (302)
T ss_pred cCceeEEEEeehhccccHHHHHHHHhh---cCCccCHHHHHHHHHHHHHHHHHHhccC-CcccccCCCcceeEecCCCce
Confidence 556679999999999999999876532 2246899999999999999999999972 249999999999999999999
Q ss_pred EEeeeccchhcccccCCCCCCc--ceeecccccccccCCCccCCC----CCcccchhhHHHHHHHHHhCCCCCCCCCCCc
Q 005045 540 HVGDFGLAKFLFEISDNPSKNQ--TVSIGLKGSIGYIPPEHMNGQ----VSILGDIYSYGILLLEMFTGKRPTGDMFKDD 613 (717)
Q Consensus 540 kl~Dfg~~~~~~~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~----~~~~sDvwslG~vl~elltg~~p~~~~~~~~ 613 (717)
++.|||.++...-......+.. ........|..|+|||.+.-+ .+.++|||||||++|.|+.|..||.......
T Consensus 169 vl~D~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~G 248 (302)
T KOG2345|consen 169 VLMDLGSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQG 248 (302)
T ss_pred EEEeccCccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcC
Confidence 9999999986522111111110 111123478899999997543 6899999999999999999999997654332
Q ss_pred hhhhHHHHhcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCC
Q 005045 614 FSIHMFVSMALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERI 693 (717)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp 693 (717)
.++...+ .-.++.-|. ...++..+.+++.+|++.||.+||
T Consensus 249 gSlaLAv------~n~q~s~P~----------------------------------~~~yse~l~~lik~mlqvdP~qRP 288 (302)
T KOG2345|consen 249 GSLALAV------QNAQISIPN----------------------------------SSRYSEALHQLIKSMLQVDPNQRP 288 (302)
T ss_pred CeEEEee------eccccccCC----------------------------------CCCccHHHHHHHHHHhcCCcccCC
Confidence 2221110 001111111 111367789999999999999999
Q ss_pred CHHHHHHHHHHH
Q 005045 694 AMNVVVNNLKTI 705 (717)
Q Consensus 694 s~~eil~~l~~i 705 (717)
++.|++..+..+
T Consensus 289 ~i~~ll~~~d~L 300 (302)
T KOG2345|consen 289 TIPELLSKLDDL 300 (302)
T ss_pred CHHHHHHHHHhh
Confidence 999999988765
No 18
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-40 Score=331.94 Aligned_cols=261 Identities=28% Similarity=0.447 Sum_probs=202.9
Q ss_pred ccccccccccCcccccceEEEEeC-CCchhhhHHhHhhhhhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceEE
Q 005045 388 TDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFKA 466 (717)
Q Consensus 388 ~~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~ 466 (717)
..+|...+.||+|.||.||++... +|+.+|||..........+.+.+|+.+|++++|||||++++...... . ..++
T Consensus 16 ~~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~--~-~~~~ 92 (313)
T KOG0198|consen 16 ISNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRE--N-DEYN 92 (313)
T ss_pred cchhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCcccccc--C-eeeE
Confidence 457889999999999999999965 59999999988664333677899999999999999999999743221 1 3689
Q ss_pred EEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCC-CCceEEeeec
Q 005045 467 LVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDK-DMTAHVGDFG 545 (717)
Q Consensus 467 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~-~~~~kl~Dfg 545 (717)
+.|||+++|+|.+++.+.. ..+++..++.+++||++||+|||++ |||||||||+||+++. ++.+||+|||
T Consensus 93 i~mEy~~~GsL~~~~~~~g------~~l~E~~v~~ytr~iL~GL~ylHs~---g~vH~DiK~~NiLl~~~~~~~KlaDFG 163 (313)
T KOG0198|consen 93 IFMEYAPGGSLSDLIKRYG------GKLPEPLVRRYTRQILEGLAYLHSK---GIVHCDIKPANILLDPSNGDVKLADFG 163 (313)
T ss_pred eeeeccCCCcHHHHHHHcC------CCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCcccceEEEeCCCCeEEeccCc
Confidence 9999999999999998763 2699999999999999999999997 9999999999999999 7999999999
Q ss_pred cchhcccccCCCCCCcceeecccccccccCCCccC-CCC-CcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHHHhc
Q 005045 546 LAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMN-GQV-SILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVSMA 623 (717)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~-~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~ 623 (717)
.+..... ............||+.|||||++. |.. .+++||||+||++.||+||..||.............
T Consensus 164 ~a~~~~~----~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~i---- 235 (313)
T KOG0198|consen 164 LAKKLES----KGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALLLI---- 235 (313)
T ss_pred ccccccc----ccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcchHHHHHHH----
Confidence 9987632 011122233567999999999977 433 459999999999999999999997641110000000
Q ss_pred CChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHHHHH
Q 005045 624 LPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVNNLK 703 (717)
Q Consensus 624 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~~l~ 703 (717)
......+. .+...+....+|+.+|++.+|++||||+|+++.-.
T Consensus 236 -------g~~~~~P~------------------------------ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf 278 (313)
T KOG0198|consen 236 -------GREDSLPE------------------------------IPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPF 278 (313)
T ss_pred -------hccCCCCC------------------------------CCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChh
Confidence 00000110 11112556788999999999999999999997654
Q ss_pred HH
Q 005045 704 TI 705 (717)
Q Consensus 704 ~i 705 (717)
-.
T Consensus 279 ~~ 280 (313)
T KOG0198|consen 279 LK 280 (313)
T ss_pred hh
Confidence 43
No 19
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=8.9e-42 Score=346.25 Aligned_cols=353 Identities=22% Similarity=0.215 Sum_probs=319.1
Q ss_pred eecEEEcCCCcCcCCCCcCCcCC--CCCCEEECCCCcccccCCcCCCCCCCCCEEEccCccccccCCccccCCCCCCEEe
Q 005045 11 MTQDLNLTYNYLSGKIPTNLSHC--TELRSFEASVNDFVGQIPNQLSSLTKLEIIGLGGSNLTGNVPAWIGNFSSLKALS 88 (717)
Q Consensus 11 ~~~~L~L~~n~l~~~~~~~~~~l--~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 88 (717)
....|+.++++|..+.-..+..+ +.-+.|++++|.+..+-+..|.++++|++++|..|.++ .+|.......+|+.|+
T Consensus 53 ~~~lldcs~~~lea~~~~~l~g~lp~~t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~~~sghl~~L~ 131 (873)
T KOG4194|consen 53 NTRLLDCSDRELEAIDKSRLKGFLPSQTQTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELT-RIPRFGHESGHLEKLD 131 (873)
T ss_pred CceeeecCccccccccccccCCcCccceeeeeccccccccCcHHHHhcCCcceeeeeccchhh-hcccccccccceeEEe
Confidence 67889999999985433222222 34567999999999888888999999999999999999 8998777777899999
Q ss_pred ccCCcCcccCChhhhccCCCCeEeccCCCCCCCCCccccCCCCccEEEcccCcccccCCcccccCCCCcceeeccccccc
Q 005045 89 LAWNNLRGSIPNELGQLSGLGFFTLYGNFISGIIPSSIYNISSIYYFSVTQNQLHGQLPTDVGLTLPNLKIFAGAVNYFT 168 (717)
Q Consensus 89 L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~l~~~~~~~l~~L~~L~l~~n~l~ 168 (717)
|.+|.|+++-.+.+..++.|++||||.|.|+.+.-.+|..-.++++|+|++|.|+ .+..+.|..+.+|..|.|+.|+++
T Consensus 132 L~~N~I~sv~se~L~~l~alrslDLSrN~is~i~~~sfp~~~ni~~L~La~N~It-~l~~~~F~~lnsL~tlkLsrNrit 210 (873)
T KOG4194|consen 132 LRHNLISSVTSEELSALPALRSLDLSRNLISEIPKPSFPAKVNIKKLNLASNRIT-TLETGHFDSLNSLLTLKLSRNRIT 210 (873)
T ss_pred eeccccccccHHHHHhHhhhhhhhhhhchhhcccCCCCCCCCCceEEeecccccc-ccccccccccchheeeecccCccc
Confidence 9999999888899999999999999999999888889999899999999999998 999999999999999999999999
Q ss_pred ccCCccCCCCCCCCEEeccCccccccCCCCccCCCCCCeeeccccccCCcccCchhhhhhhccCCCCCEEEeecCcccCc
Q 005045 169 GSIPVSLSNASNLQVLDFAENGLTGTIPGNFGSLKDLVRLNFDQNELGSREIGDLNFLKFLANCTSLEVLGLARNSFGGE 248 (717)
Q Consensus 169 ~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~ 248 (717)
.+.+..|.++++|+.|+|..|+|.-+.--.|.++++|+.|.|..|.|..+.. ..|..+.++++|+|+.|++...
T Consensus 211 tLp~r~Fk~L~~L~~LdLnrN~irive~ltFqgL~Sl~nlklqrN~I~kL~D------G~Fy~l~kme~l~L~~N~l~~v 284 (873)
T KOG4194|consen 211 TLPQRSFKRLPKLESLDLNRNRIRIVEGLTFQGLPSLQNLKLQRNDISKLDD------GAFYGLEKMEHLNLETNRLQAV 284 (873)
T ss_pred ccCHHHhhhcchhhhhhccccceeeehhhhhcCchhhhhhhhhhcCcccccC------cceeeecccceeecccchhhhh
Confidence 9888999999999999999999995556789999999999999999999884 4688999999999999999955
Q ss_pred CchhhhhccccccEEecCCCccCCCCCccccCCCCCCEEEccCCcCccccchhhhcCCCCCeEEcccCcCCCCCCccccc
Q 005045 249 MPISIANLSTHLRRLTMGENLMHGNIPVGIGNLVNLNLLGLEGNNLSGSVPEVIGRLNKLEGLGLNVNKFSGLIPSSLGN 328 (717)
Q Consensus 249 ~p~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 328 (717)
-..+++++ +.|+.|++|+|.|..+.+++++..+.|++|+|++|+|+...+++|..|..|++|+|++|.++.+....|.+
T Consensus 285 n~g~lfgL-t~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~ 363 (873)
T KOG4194|consen 285 NEGWLFGL-TSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVG 363 (873)
T ss_pred hccccccc-chhhhhccchhhhheeecchhhhcccceeEeccccccccCChhHHHHHHHhhhhcccccchHHHHhhHHHH
Confidence 56677777 69999999999999999999999999999999999999888999999999999999999999999999999
Q ss_pred ccccceeecccccccccCCc---CccCcCCCceEEeecccCCCCCCcc
Q 005045 329 LTILTRLWMEENRLEGSIPP---SLGNCQKLLVLNLSSNDLNGTIPKE 373 (717)
Q Consensus 329 l~~L~~L~L~~N~l~~~~p~---~~~~l~~L~~L~l~~N~l~~~~p~~ 373 (717)
+++|+.|||++|.|+..+.+ .|..|++|+.|++.||+|. .||..
T Consensus 364 lssL~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~l~gNqlk-~I~kr 410 (873)
T KOG4194|consen 364 LSSLHKLDLRSNELSWCIEDAAVAFNGLPSLRKLRLTGNQLK-SIPKR 410 (873)
T ss_pred hhhhhhhcCcCCeEEEEEecchhhhccchhhhheeecCceee-ecchh
Confidence 99999999999999876654 5788999999999999997 55543
No 20
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-40 Score=340.28 Aligned_cols=252 Identities=22% Similarity=0.344 Sum_probs=208.5
Q ss_pred cccccccccccccCcccccceEEEE-eCCCchhhhHHhHhhhhhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCc
Q 005045 385 SKSTDNFSKENLIGTGSFGSVYKGT-LGDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRVITACSSVDLEGND 463 (717)
Q Consensus 385 ~~~~~~y~~~~~ig~g~~g~v~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~ 463 (717)
......|....+||+|+.|.||.|. ..+++.||+|.+........+-+.+|+.+|+..+|+|||.+++.+. ..+
T Consensus 269 ~dP~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Syl-----v~d 343 (550)
T KOG0578|consen 269 GDPRSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYL-----VGD 343 (550)
T ss_pred CChhhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhc-----ccc
Confidence 3456689999999999999999999 4578899999998877777788899999999999999999999853 336
Q ss_pred eEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEee
Q 005045 464 FKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGD 543 (717)
Q Consensus 464 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~D 543 (717)
.+|+||||++||+|.|.+... .+++.++..|++++++||+|||.+ ||+|||||.+||+++.+|.+||+|
T Consensus 344 eLWVVMEym~ggsLTDvVt~~--------~~~E~qIA~Icre~l~aL~fLH~~---gIiHrDIKSDnILL~~~g~vKltD 412 (550)
T KOG0578|consen 344 ELWVVMEYMEGGSLTDVVTKT--------RMTEGQIAAICREILQGLKFLHAR---GIIHRDIKSDNILLTMDGSVKLTD 412 (550)
T ss_pred eeEEEEeecCCCchhhhhhcc--------cccHHHHHHHHHHHHHHHHHHHhc---ceeeeccccceeEeccCCcEEEee
Confidence 899999999999999999754 589999999999999999999998 999999999999999999999999
Q ss_pred eccchhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHHHh
Q 005045 544 FGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVSM 622 (717)
Q Consensus 544 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~ 622 (717)
||.+..+.+. ...+....||+.|||||+... .|++++||||||++++||+-|++||-.. ......+.
T Consensus 413 FGFcaqi~~~-------~~KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE--~PlrAlyL--- 480 (550)
T KOG0578|consen 413 FGFCAQISEE-------QSKRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNE--NPLRALYL--- 480 (550)
T ss_pred eeeeeccccc-------cCccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCC--ChHHHHHH---
Confidence 9999887322 224556789999999999765 5999999999999999999999999642 11111111
Q ss_pred cCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHH
Q 005045 623 ALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVN 700 (717)
Q Consensus 623 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~ 700 (717)
+..-..+.+ ..++..+..|.+|+.+||+.||++||||+|+|+
T Consensus 481 -----Ia~ng~P~l-------------------------------k~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~ 522 (550)
T KOG0578|consen 481 -----IATNGTPKL-------------------------------KNPEKLSPELKDFLDRCLVVDVEQRASAKELLE 522 (550)
T ss_pred -----HhhcCCCCc-------------------------------CCccccCHHHHHHHHHHhhcchhcCCCHHHHhc
Confidence 111111111 122334777899999999999999999999996
No 21
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=2.2e-40 Score=354.64 Aligned_cols=265 Identities=27% Similarity=0.495 Sum_probs=216.9
Q ss_pred cccccccccccCcccccceEEEEe------CCCchhhhHHhHhhhhh-HHHHHHHHHHHHhcCCCCceeEEEEeeccccC
Q 005045 387 STDNFSKENLIGTGSFGSVYKGTL------GDGTIVAIKVLKLQQQG-ALKSFIDECNALKSTRHRNILRVITACSSVDL 459 (717)
Q Consensus 387 ~~~~y~~~~~ig~g~~g~v~~~~~------~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~ 459 (717)
...+-+..+.+|+|+||+||+|+. +....||||.++..... +++.|++|++.+..++|||||++++.|..
T Consensus 484 ~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~--- 560 (774)
T KOG1026|consen 484 PRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCRE--- 560 (774)
T ss_pred chhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEcc---
Confidence 344556778999999999999983 24557999999876554 78999999999999999999999999754
Q ss_pred CCCceEEEEEecCCCCChhhhccCCCCCcc-------cccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEE
Q 005045 460 EGNDFKALVFEFMSNGNLDQWLHPSPAEHY-------QFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVL 532 (717)
Q Consensus 460 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~-------~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIl 532 (717)
++..|+|||||..|+|.+++..+.+... ....++..+.+.||.|||.||.||-++ .+|||||.++|.+
T Consensus 561 --~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~---~FVHRDLATRNCL 635 (774)
T KOG1026|consen 561 --GDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSH---HFVHRDLATRNCL 635 (774)
T ss_pred --CCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---cccccchhhhhce
Confidence 4589999999999999999875432211 124488999999999999999999998 8999999999999
Q ss_pred eCCCCceEEeeeccchhcccccCCCCCCcceeecccccccccCCCc-cCCCCCcccchhhHHHHHHHHHh-CCCCCCCCC
Q 005045 533 LDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEH-MNGQVSILGDIYSYGILLLEMFT-GKRPTGDMF 610 (717)
Q Consensus 533 l~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~ 610 (717)
|.++..|||+|||+++.....+++ .......-+..|||||. +.|+++.+|||||||||+||+++ |..||.+..
T Consensus 636 Vge~l~VKIsDfGLsRdiYssDYY-----k~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glS 710 (774)
T KOG1026|consen 636 VGENLVVKISDFGLSRDIYSSDYY-----KVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLS 710 (774)
T ss_pred eccceEEEecccccchhhhhhhhh-----cccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccc
Confidence 999999999999999987443332 22233446788999999 67889999999999999999999 999998764
Q ss_pred CCchhhhHHHHhcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcC
Q 005045 611 KDDFSIHMFVSMALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPR 690 (717)
Q Consensus 611 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~ 690 (717)
.++.. +.++ .....+.+++||.++.+|+..||+..|.
T Consensus 711 n~EVI---------------------------------e~i~----------~g~lL~~Pe~CP~~vY~LM~~CW~~~P~ 747 (774)
T KOG1026|consen 711 NQEVI---------------------------------ECIR----------AGQLLSCPENCPTEVYSLMLECWNENPK 747 (774)
T ss_pred hHHHH---------------------------------HHHH----------cCCcccCCCCCCHHHHHHHHHHhhcCcc
Confidence 43211 1110 1111347789999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHH
Q 005045 691 ERIAMNVVVNNLKTIRN 707 (717)
Q Consensus 691 ~Rps~~eil~~l~~i~~ 707 (717)
+||+++||...|+..-+
T Consensus 748 ~RPsF~eI~~~L~~~~~ 764 (774)
T KOG1026|consen 748 RRPSFKEIHSRLQAWAQ 764 (774)
T ss_pred cCCCHHHHHHHHHHHHh
Confidence 99999999999988754
No 22
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.1e-40 Score=330.62 Aligned_cols=278 Identities=25% Similarity=0.379 Sum_probs=207.4
Q ss_pred ccccccccccccCcccccceEEEEe-CCCchhhhHHhHhhh--hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCC
Q 005045 386 KSTDNFSKENLIGTGSFGSVYKGTL-GDGTIVAIKVLKLQQ--QGALKSFIDECNALKSTRHRNILRVITACSSVDLEGN 462 (717)
Q Consensus 386 ~~~~~y~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~ 462 (717)
...+.|+.+++||+|.||.||+|++ .+|+.||+|.+..+. .+......+||.||++++||||+++.+..++. ..
T Consensus 114 r~~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~---~~ 190 (560)
T KOG0600|consen 114 RRADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSK---LS 190 (560)
T ss_pred cchHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEec---CC
Confidence 4577899999999999999999994 589999999998664 55667788999999999999999999987543 24
Q ss_pred ceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEe
Q 005045 463 DFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVG 542 (717)
Q Consensus 463 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~ 542 (717)
..+|+|||||+. +|.-++.... -.+++.++..+|+|++.||+|||++ ||+|||||.+||||+.+|.+||+
T Consensus 191 ~siYlVFeYMdh-DL~GLl~~p~------vkft~~qIKc~mkQLl~Gl~~cH~~---gvlHRDIK~SNiLidn~G~LKia 260 (560)
T KOG0600|consen 191 GSIYLVFEYMDH-DLSGLLSSPG------VKFTEPQIKCYMKQLLEGLEYCHSR---GVLHRDIKGSNILIDNNGVLKIA 260 (560)
T ss_pred ceEEEEEecccc-hhhhhhcCCC------cccChHHHHHHHHHHHHHHHHHhhc---CeeeccccccceEEcCCCCEEec
Confidence 689999999964 7887776543 5799999999999999999999998 99999999999999999999999
Q ss_pred eeccchhcccccCCCCCCcceeecccccccccCCCccCCC--CCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHH
Q 005045 543 DFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNGQ--VSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFV 620 (717)
Q Consensus 543 Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~ 620 (717)
|||+|+++.... ....+...-|..|+|||++.|. |+.++|+||.|||+.||++|++.|.+..+-++ +...+
T Consensus 261 DFGLAr~y~~~~------~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQ-l~kIf 333 (560)
T KOG0600|consen 261 DFGLARFYTPSG------SAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQ-LHKIF 333 (560)
T ss_pred cccceeeccCCC------CcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHH-HHHHH
Confidence 999999773221 2224556689999999998774 99999999999999999999999976533221 11111
Q ss_pred Hh-cCC-hhhhhhcCCCCCCCC-CCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHH
Q 005045 621 SM-ALP-DHVMDILDPSMPLDE-ENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNV 697 (717)
Q Consensus 621 ~~-~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~e 697 (717)
.. .-| +..... ..++... ......+...+.+. ....+....+|+..+|..||++|.||.+
T Consensus 334 klcGSP~e~~W~~--~kLP~~~~~kp~~~y~r~l~E~---------------~~~~~~~~l~Ll~~lL~ldP~kR~tA~~ 396 (560)
T KOG0600|consen 334 KLCGSPTEDYWPV--SKLPHATIFKPQQPYKRRLRET---------------FKDFPASALDLLEKLLSLDPDKRGTASS 396 (560)
T ss_pred HHhCCCChhcccc--ccCCcccccCCCCcccchHHHH---------------hccCCHHHHHHHHHHhccCccccccHHH
Confidence 11 111 111110 0111000 00001111111111 1122445678999999999999999999
Q ss_pred HHH
Q 005045 698 VVN 700 (717)
Q Consensus 698 il~ 700 (717)
+++
T Consensus 397 aL~ 399 (560)
T KOG0600|consen 397 ALQ 399 (560)
T ss_pred Hhc
Confidence 875
No 23
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-40 Score=334.14 Aligned_cols=254 Identities=24% Similarity=0.420 Sum_probs=210.4
Q ss_pred cccccccccccccccCcccccceEEEEeCCCchhhhHHhHhhhhhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCC
Q 005045 383 DISKSTDNFSKENLIGTGSFGSVYKGTLGDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRVITACSSVDLEGN 462 (717)
Q Consensus 383 ~~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~ 462 (717)
.|..++.....++-+|.|+.|.||+|+.. ++.||||.++... ..+|+-|++++||||+.+.++|....
T Consensus 118 ~WeiPFe~IsELeWlGSGaQGAVF~Grl~-netVAVKKV~elk-------ETdIKHLRkLkH~NII~FkGVCtqsP---- 185 (904)
T KOG4721|consen 118 LWEIPFEEISELEWLGSGAQGAVFLGRLH-NETVAVKKVRELK-------ETDIKHLRKLKHPNIITFKGVCTQSP---- 185 (904)
T ss_pred hccCCHHHhhhhhhhccCcccceeeeecc-CceehhHHHhhhh-------hhhHHHHHhccCcceeeEeeeecCCc----
Confidence 34455666777888999999999999985 6789999987433 34788999999999999999976544
Q ss_pred ceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEe
Q 005045 463 DFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVG 542 (717)
Q Consensus 463 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~ 542 (717)
.+|||||||+.|-|+..++.+ ..++......|..+||.||.|||.+ +|+|||||.-||+|+.+..|||+
T Consensus 186 -cyCIiMEfCa~GqL~~VLka~-------~~itp~llv~Wsk~IA~GM~YLH~h---KIIHRDLKSPNiLIs~~d~VKIs 254 (904)
T KOG4721|consen 186 -CYCIIMEFCAQGQLYEVLKAG-------RPITPSLLVDWSKGIAGGMNYLHLH---KIIHRDLKSPNILISYDDVVKIS 254 (904)
T ss_pred -eeEEeeeccccccHHHHHhcc-------CccCHHHHHHHHHHhhhhhHHHHHh---hHhhhccCCCceEeeccceEEec
Confidence 889999999999999999977 6788999999999999999999998 99999999999999999999999
Q ss_pred eeccchhcccccCCCCCCcceeecccccccccCCCccCCC-CCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHHH
Q 005045 543 DFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNGQ-VSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVS 621 (717)
Q Consensus 543 Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~ 621 (717)
|||-+....+ ......++||..|||||+++.+ .+.|+||||||||||||+||..||.+.+...+
T Consensus 255 DFGTS~e~~~--------~STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAI------- 319 (904)
T KOG4721|consen 255 DFGTSKELSD--------KSTKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAI------- 319 (904)
T ss_pred cccchHhhhh--------hhhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchhee-------
Confidence 9998876521 1223457899999999998876 69999999999999999999999987643321
Q ss_pred hcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHHH
Q 005045 622 MALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVNN 701 (717)
Q Consensus 622 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~~ 701 (717)
+..+-...+. ...+.+|+.-|.-|+++||+-.|..|||+++|+..
T Consensus 320 ------IwGVGsNsL~-----------------------------LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~H 364 (904)
T KOG4721|consen 320 ------IWGVGSNSLH-----------------------------LPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLH 364 (904)
T ss_pred ------EEeccCCccc-----------------------------ccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHH
Confidence 1112222221 22456789999999999999999999999999998
Q ss_pred HHHHHHHH
Q 005045 702 LKTIRNCF 709 (717)
Q Consensus 702 l~~i~~~~ 709 (717)
++-...++
T Consensus 365 ldIa~pel 372 (904)
T KOG4721|consen 365 LDIASPEL 372 (904)
T ss_pred HhhcCHHH
Confidence 87655443
No 24
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-40 Score=339.14 Aligned_cols=271 Identities=29% Similarity=0.480 Sum_probs=217.2
Q ss_pred CCCcccccccccccccccccCcccccceEEEEeCCCchhhhHHhHhhh--hhHHHHHHHHHHHHhcCCCCceeEEEEeec
Q 005045 378 GMSYSDISKSTDNFSKENLIGTGSFGSVYKGTLGDGTIVAIKVLKLQQ--QGALKSFIDECNALKSTRHRNILRVITACS 455 (717)
Q Consensus 378 ~~s~~~~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~ 455 (717)
..+..++.+..+...+...||+|.||+||+|+|- -.||||+++... ++..+.|++|+.++++-+|.||+-++++|.
T Consensus 381 s~s~~~WeIp~~ev~l~~rIGsGsFGtV~Rg~wh--GdVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~ 458 (678)
T KOG0193|consen 381 SDSLEEWEIPPEEVLLGERIGSGSFGTVYRGRWH--GDVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACM 458 (678)
T ss_pred CccccccccCHHHhhccceeccccccceeecccc--cceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhc
Confidence 4556778888999999999999999999999973 349999998664 456789999999999999999999999964
Q ss_pred cccCCCCceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCC
Q 005045 456 SVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDK 535 (717)
Q Consensus 456 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~ 535 (717)
.. .. .||+.||+|-+|+.+++... .++.+...++||+||++|+.|||.. +|+|||||..|||+.+
T Consensus 459 ~p-----~~-AIiTqwCeGsSLY~hlHv~e------tkfdm~~~idIAqQiaqGM~YLHAK---~IIHrDLKSnNIFl~~ 523 (678)
T KOG0193|consen 459 NP-----PL-AIITQWCEGSSLYTHLHVQE------TKFDMNTTIDIAQQIAQGMDYLHAK---NIIHRDLKSNNIFLHE 523 (678)
T ss_pred CC-----ce-eeeehhccCchhhhhccchh------hhhhHHHHHHHHHHHHHhhhhhhhh---hhhhhhccccceEEcc
Confidence 43 34 99999999999999998654 6789999999999999999999996 9999999999999999
Q ss_pred CCceEEeeeccchhcccccCCCCCCcceeecccccccccCCCccCC----CCCcccchhhHHHHHHHHHhCCCCCCCCCC
Q 005045 536 DMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG----QVSILGDIYSYGILLLEMFTGKRPTGDMFK 611 (717)
Q Consensus 536 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~----~~~~~sDvwslG~vl~elltg~~p~~~~~~ 611 (717)
++.|||+|||++..-..+. ........-|...|||||+++. .+++.+||||||+|+|||++|..||.....
T Consensus 524 ~~kVkIgDFGLatvk~~w~-----g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~ 598 (678)
T KOG0193|consen 524 DLKVKIGDFGLATVKTRWS-----GEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNR 598 (678)
T ss_pred CCcEEEecccceeeeeeec-----cccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCCh
Confidence 9999999999997653331 1111222347789999999654 389999999999999999999999983322
Q ss_pred CchhhhHHHHhcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCC
Q 005045 612 DDFSIHMFVSMALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRE 691 (717)
Q Consensus 612 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~ 691 (717)
+.+ + ..++.. ++.+.+ .....+|++++.+|+..||..++++
T Consensus 599 dqI-i-fmVGrG-------~l~pd~------------------------------s~~~s~~pk~mk~Ll~~C~~~~~~e 639 (678)
T KOG0193|consen 599 DQI-I-FMVGRG-------YLMPDL------------------------------SKIRSNCPKAMKRLLSDCWKFDREE 639 (678)
T ss_pred hhe-E-EEeccc-------ccCccc------------------------------hhhhccCHHHHHHHHHHHHhcCccc
Confidence 211 1 111111 001111 0123467889999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHH
Q 005045 692 RIAMNVVVNNLKTIRNCF 709 (717)
Q Consensus 692 Rps~~eil~~l~~i~~~~ 709 (717)
||.+.+|+..|+.+....
T Consensus 640 RP~F~~il~~l~~l~~~~ 657 (678)
T KOG0193|consen 640 RPLFPQLLSKLEELLPSL 657 (678)
T ss_pred CccHHHHHHHHHHhhhcc
Confidence 999999999999888754
No 25
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=9e-40 Score=302.40 Aligned_cols=273 Identities=25% Similarity=0.343 Sum_probs=207.0
Q ss_pred cccccccccCcccccceEEEEe-CCCchhhhHHhHhhh--hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceE
Q 005045 389 DNFSKENLIGTGSFGSVYKGTL-GDGTIVAIKVLKLQQ--QGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFK 465 (717)
Q Consensus 389 ~~y~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~ 465 (717)
.+|..++++|+|.||.||+|++ ++|+.||+|.++... .+......+|++.|+.++|+||+.++++ +...+..
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~-----F~~~~~l 76 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDV-----FPHKSNL 76 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhh-----ccCCCce
Confidence 5799999999999999999994 599999999998653 3345677899999999999999999999 6667799
Q ss_pred EEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeec
Q 005045 466 ALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFG 545 (717)
Q Consensus 466 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg 545 (717)
.+|+||++ .+|...++... -.++...+..++.++++|++|||++ .|+||||||.|++++.+|.+||+|||
T Consensus 77 ~lVfEfm~-tdLe~vIkd~~------i~l~pa~iK~y~~m~LkGl~y~H~~---~IlHRDlKPnNLLis~~g~lKiADFG 146 (318)
T KOG0659|consen 77 SLVFEFMP-TDLEVVIKDKN------IILSPADIKSYMLMTLKGLAYCHSK---WILHRDLKPNNLLISSDGQLKIADFG 146 (318)
T ss_pred EEEEEecc-ccHHHHhcccc------cccCHHHHHHHHHHHHHHHHHHHhh---hhhcccCCccceEEcCCCcEEeeccc
Confidence 99999996 68999998664 5788999999999999999999998 99999999999999999999999999
Q ss_pred cchhcccccCCCCCCcceeecccccccccCCCccCC--CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHH--HH
Q 005045 546 LAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG--QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMF--VS 621 (717)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~--~~ 621 (717)
+|+.+..+ .....+..-|..|+|||.+-| .|+..+||||.||++.||+.|.+-|.+..+-++...-+ .+
T Consensus 147 LAr~f~~p-------~~~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LG 219 (318)
T KOG0659|consen 147 LARFFGSP-------NRIQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALG 219 (318)
T ss_pred chhccCCC-------CcccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcC
Confidence 99987322 222333467889999999655 49999999999999999999988887654332211111 11
Q ss_pred hcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHHH
Q 005045 622 MALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVNN 701 (717)
Q Consensus 622 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~~ 701 (717)
..-++.+.++..- .++..+. +..... .......+.....+++.+|+.++|-+|+|++|++++
T Consensus 220 TP~~~~WP~~~~l-------pdY~~~~----------~~P~~~-~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~ 281 (318)
T KOG0659|consen 220 TPTPDQWPEMTSL-------PDYVKIQ----------QFPKPP-LNNLFPAASSDALDLLSKMLTYNPKKRITASQALKH 281 (318)
T ss_pred CCCcccCcccccc-------ccHHHHh----------cCCCCc-cccccccccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence 1112222221110 0010000 000000 011334446667999999999999999999999864
No 26
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=4.1e-39 Score=326.58 Aligned_cols=211 Identities=23% Similarity=0.362 Sum_probs=179.4
Q ss_pred cccccccccccccCcccccceEEEEe-CCCchhhhHHhHhhh---hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCC
Q 005045 385 SKSTDNFSKENLIGTGSFGSVYKGTL-GDGTIVAIKVLKLQQ---QGALKSFIDECNALKSTRHRNILRVITACSSVDLE 460 (717)
Q Consensus 385 ~~~~~~y~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~ 460 (717)
....++|..+..||+|+||.||+|+- .+|..+|+|+++... ....+....|.++|...++|.||+++.. ++
T Consensus 137 r~~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYs-----FQ 211 (550)
T KOG0605|consen 137 RLSLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYS-----FQ 211 (550)
T ss_pred cCCcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEE-----ec
Confidence 34688999999999999999999994 489999999998653 4567888999999999999999999999 67
Q ss_pred CCceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceE
Q 005045 461 GNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAH 540 (717)
Q Consensus 461 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~k 540 (717)
+.+.+|+||||+|||++..++.+. +.+++..++.++.+++-|++.+|+. ||+||||||+|++||..|++|
T Consensus 212 D~~~LYLiMEylPGGD~mTLL~~~-------~~L~e~~arfYiaE~vlAI~~iH~~---gyIHRDIKPdNlLiD~~GHiK 281 (550)
T KOG0605|consen 212 DKEYLYLIMEYLPGGDMMTLLMRK-------DTLTEDWARFYIAETVLAIESIHQL---GYIHRDIKPDNLLIDAKGHIK 281 (550)
T ss_pred CCCeeEEEEEecCCccHHHHHHhc-------CcCchHHHHHHHHHHHHHHHHHHHc---CcccccCChhheeecCCCCEe
Confidence 778999999999999999999865 6799999999999999999999998 999999999999999999999
Q ss_pred Eeeeccchhccccc------------------CCCCCCc---ce-------------------eecccccccccCCCccC
Q 005045 541 VGDFGLAKFLFEIS------------------DNPSKNQ---TV-------------------SIGLKGSIGYIPPEHMN 580 (717)
Q Consensus 541 l~Dfg~~~~~~~~~------------------~~~~~~~---~~-------------------~~~~~~~~~y~aPE~~~ 580 (717)
|+|||++.-..... ....... .. .....|||.|+|||++.
T Consensus 282 LSDFGLs~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll 361 (550)
T KOG0605|consen 282 LSDFGLSTGLDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLL 361 (550)
T ss_pred eccccccchhhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHh
Confidence 99999995432100 0000000 00 01246999999999976
Q ss_pred CC-CCcccchhhHHHHHHHHHhCCCCCCCCC
Q 005045 581 GQ-VSILGDIYSYGILLLEMFTGKRPTGDMF 610 (717)
Q Consensus 581 ~~-~~~~sDvwslG~vl~elltg~~p~~~~~ 610 (717)
|+ |+..+|+||||||+|||+.|.+||....
T Consensus 362 ~kgY~~~cDwWSLG~ImyEmLvGyPPF~s~t 392 (550)
T KOG0605|consen 362 GKGYGKECDWWSLGCIMYEMLVGYPPFCSET 392 (550)
T ss_pred cCCCCccccHHHHHHHHHHHHhCCCCCCCCC
Confidence 65 8999999999999999999999997653
No 27
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=1.3e-38 Score=335.69 Aligned_cols=270 Identities=23% Similarity=0.378 Sum_probs=203.9
Q ss_pred cccccccccccccCcccccceEEEEe------CCCchhhhHHhHhhh-hhHHHHHHHHHHHHhcC-CCCceeEEEEeecc
Q 005045 385 SKSTDNFSKENLIGTGSFGSVYKGTL------GDGTIVAIKVLKLQQ-QGALKSFIDECNALKST-RHRNILRVITACSS 456 (717)
Q Consensus 385 ~~~~~~y~~~~~ig~g~~g~v~~~~~------~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~ 456 (717)
..+.++|++.++||+|+||.||+|.+ .+++.||+|++.... ......+.+|+++++.+ +||||+++++++.
T Consensus 3 ~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~- 81 (338)
T cd05102 3 EFPRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACT- 81 (338)
T ss_pred ccchhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEec-
Confidence 45678999999999999999999973 245789999987432 23456788999999999 8999999999863
Q ss_pred ccCCCCceEEEEEecCCCCChhhhccCCCCCc------------------------------------------------
Q 005045 457 VDLEGNDFKALVFEFMSNGNLDQWLHPSPAEH------------------------------------------------ 488 (717)
Q Consensus 457 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~------------------------------------------------ 488 (717)
......++||||+++|+|.+++.......
T Consensus 82 ---~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (338)
T cd05102 82 ---KPNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTN 158 (338)
T ss_pred ---CCCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccc
Confidence 23456899999999999999886432100
Q ss_pred -------ccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeeccchhcccccCCCCCCc
Q 005045 489 -------YQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQ 561 (717)
Q Consensus 489 -------~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 561 (717)
.....+++..+..++.||++||+|||+. +|+||||||+||+++.++.+||+|||+++...... ..
T Consensus 159 ~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~-----~~ 230 (338)
T cd05102 159 PPQETDDLWKSPLTMEDLICYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDP-----DY 230 (338)
T ss_pred cchhccccccCCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCccceEEEcCCCcEEEeecccccccccCc-----ch
Confidence 0013478889999999999999999997 99999999999999999999999999997642111 11
Q ss_pred ceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHh-CCCCCCCCCCCchhhhHHHHhcCChhhhhhcCCCCCCC
Q 005045 562 TVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFT-GKRPTGDMFKDDFSIHMFVSMALPDHVMDILDPSMPLD 639 (717)
Q Consensus 562 ~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 639 (717)
.......++..|+|||++.+ .++.++|||||||++|||++ |..||........ ..... .+.....
T Consensus 231 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~-~~~~~-----------~~~~~~~- 297 (338)
T cd05102 231 VRKGSARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEE-FCQRL-----------KDGTRMR- 297 (338)
T ss_pred hcccCCCCCccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHH-HHHHH-----------hcCCCCC-
Confidence 11122345678999999654 58999999999999999997 9999976432211 11000 0000000
Q ss_pred CCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHHHHHHHHHH
Q 005045 640 EENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVNNLKTIRNC 708 (717)
Q Consensus 640 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~~l~~i~~~ 708 (717)
.+..++..+.+++.+||+.+|++|||+.||++.|+.+..+
T Consensus 298 -----------------------------~~~~~~~~l~~li~~cl~~dp~~RPs~~el~~~l~~~~~~ 337 (338)
T cd05102 298 -----------------------------APENATPEIYRIMLACWQGDPKERPTFSALVEILGDLLQE 337 (338)
T ss_pred -----------------------------CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 0112245678999999999999999999999999988753
No 28
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=4.5e-39 Score=302.23 Aligned_cols=201 Identities=30% Similarity=0.424 Sum_probs=179.8
Q ss_pred ccccccccccccCcccccceEEEEeC-CCchhhhHHhHhhh---hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCC
Q 005045 386 KSTDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQ---QGALKSFIDECNALKSTRHRNILRVITACSSVDLEG 461 (717)
Q Consensus 386 ~~~~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~ 461 (717)
-..++|+..+.+|.|+||+|.+++.+ +|..+|+|++.... ....+...+|..+++.+.||.++++++.+ .+
T Consensus 41 ~~l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~-----~d 115 (355)
T KOG0616|consen 41 YSLQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTF-----KD 115 (355)
T ss_pred cchhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEee-----cc
Confidence 34568999999999999999999966 79999999997653 45567788999999999999999999984 45
Q ss_pred CceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEE
Q 005045 462 NDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHV 541 (717)
Q Consensus 462 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl 541 (717)
.+.+++||||++||-+..++++. +++++..++.+|.+|+.|++|||+. +|++||+||+|||+|++|.+||
T Consensus 116 ~~~lymvmeyv~GGElFS~Lrk~-------~rF~e~~arFYAAeivlAleylH~~---~iiYRDLKPENiLlD~~G~iKi 185 (355)
T KOG0616|consen 116 NSNLYMVMEYVPGGELFSYLRKS-------GRFSEPHARFYAAEIVLALEYLHSL---DIIYRDLKPENLLLDQNGHIKI 185 (355)
T ss_pred CCeEEEEEeccCCccHHHHHHhc-------CCCCchhHHHHHHHHHHHHHHHHhc---CeeeccCChHHeeeccCCcEEE
Confidence 56999999999999999999866 6899999999999999999999998 9999999999999999999999
Q ss_pred eeeccchhcccccCCCCCCcceeecccccccccCCCccCCC-CCcccchhhHHHHHHHHHhCCCCCCCCCC
Q 005045 542 GDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNGQ-VSILGDIYSYGILLLEMFTGKRPTGDMFK 611 (717)
Q Consensus 542 ~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~sDvwslG~vl~elltg~~p~~~~~~ 611 (717)
+|||.|+.. .....+.+||+.|+|||++..+ ++.++|+|||||++|||+.|..||....+
T Consensus 186 tDFGFAK~v----------~~rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~ 246 (355)
T KOG0616|consen 186 TDFGFAKRV----------SGRTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNP 246 (355)
T ss_pred EeccceEEe----------cCcEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCCh
Confidence 999999976 2335668899999999997665 89999999999999999999999976533
No 29
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-39 Score=322.17 Aligned_cols=270 Identities=25% Similarity=0.317 Sum_probs=207.7
Q ss_pred CCCCcccccccccccccccccCcccccceEEEEeC-CCchhhhHHhHhhhh--------------hHHHHHHHHHHHHhc
Q 005045 377 SGMSYSDISKSTDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQQ--------------GALKSFIDECNALKS 441 (717)
Q Consensus 377 ~~~s~~~~~~~~~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~~--------------~~~~~~~~e~~~l~~ 441 (717)
..+.-.+-.+..++|++.+.||+|.||.|-+|... +++.||+|++..... ...+...+|+.++++
T Consensus 85 ~~~~~~~~~k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKk 164 (576)
T KOG0585|consen 85 VRYDDDQDRKQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKK 164 (576)
T ss_pred eeecCcccceehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHh
Confidence 34445555677899999999999999999999965 899999999864321 113578999999999
Q ss_pred CCCCceeEEEEeeccccCCCCceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCe
Q 005045 442 TRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPI 521 (717)
Q Consensus 442 l~h~ni~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i 521 (717)
++|||||+++++..+. ..+.+|+|+|||..|.+...-... ..+++.++++++++++.||+|||.+ ||
T Consensus 165 l~H~nVV~LiEvLDDP---~s~~~YlVley~s~G~v~w~p~d~-------~els~~~Ar~ylrDvv~GLEYLH~Q---gi 231 (576)
T KOG0585|consen 165 LHHPNVVKLIEVLDDP---ESDKLYLVLEYCSKGEVKWCPPDK-------PELSEQQARKYLRDVVLGLEYLHYQ---GI 231 (576)
T ss_pred cCCcCeeEEEEeecCc---ccCceEEEEEeccCCccccCCCCc-------ccccHHHHHHHHHHHHHHHHHHHhc---Ce
Confidence 9999999999996554 356899999999988775433221 3389999999999999999999999 99
Q ss_pred eecCCCCCCEEeCCCCceEEeeeccchhcccccCCCCCCcceeecccccccccCCCccCC---C--CCcccchhhHHHHH
Q 005045 522 AHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG---Q--VSILGDIYSYGILL 596 (717)
Q Consensus 522 vH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~---~--~~~~sDvwslG~vl 596 (717)
+||||||+|++++.+|+|||+|||.+......... ..........||+.|+|||...+ . .+.+.||||+||+|
T Consensus 232 iHRDIKPsNLLl~~~g~VKIsDFGVs~~~~~~~~~--~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTL 309 (576)
T KOG0585|consen 232 IHRDIKPSNLLLSSDGTVKISDFGVSNEFPQGSDE--GSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTL 309 (576)
T ss_pred eccccchhheEEcCCCcEEeeccceeeecccCCcc--ccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhH
Confidence 99999999999999999999999999865332111 12222233789999999999544 2 37888999999999
Q ss_pred HHHHhCCCCCCCCCCCchhhhHHHHhcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHH
Q 005045 597 LEMFTGKRPTGDMFKDDFSIHMFVSMALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVS 676 (717)
Q Consensus 597 ~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (717)
|+|+.|+.||.+...- +...+++...+.... .++....
T Consensus 310 YCllfG~~PF~~~~~~-------------~l~~KIvn~pL~fP~-----------------------------~pe~~e~ 347 (576)
T KOG0585|consen 310 YCLLFGQLPFFDDFEL-------------ELFDKIVNDPLEFPE-----------------------------NPEINED 347 (576)
T ss_pred HHhhhccCCcccchHH-------------HHHHHHhcCcccCCC-----------------------------cccccHH
Confidence 9999999999653111 112233333332211 1123556
Q ss_pred HHHHhhccCCCCcCCCCCHHHHHHHHH
Q 005045 677 VLRIGLMCSTTSPRERIAMNVVVNNLK 703 (717)
Q Consensus 677 l~~li~~cl~~~p~~Rps~~eil~~l~ 703 (717)
+.++|.++|++||+.|.+..+|.....
T Consensus 348 ~kDli~~lL~KdP~~Ri~l~~ik~Hpw 374 (576)
T KOG0585|consen 348 LKDLIKRLLEKDPEQRITLPDIKLHPW 374 (576)
T ss_pred HHHHHHHHhhcChhheeehhhheecce
Confidence 789999999999999999999875543
No 30
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.7e-39 Score=334.09 Aligned_cols=255 Identities=24% Similarity=0.336 Sum_probs=203.9
Q ss_pred cccccccccccccCcccccceEEEEeC-CCchhhhHHhHhh----hh-hHHHHHHHHHHHHhcCC-CCceeEEEEeeccc
Q 005045 385 SKSTDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQ----QQ-GALKSFIDECNALKSTR-HRNILRVITACSSV 457 (717)
Q Consensus 385 ~~~~~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~----~~-~~~~~~~~e~~~l~~l~-h~ni~~~~~~~~~~ 457 (717)
....++|.+.+.||+|+||.|+.|++. +++.||+|++... .. ...+.+.+|+.+++.++ ||||++++++.
T Consensus 13 ~~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~--- 89 (370)
T KOG0583|consen 13 QLSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVF--- 89 (370)
T ss_pred ccccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEE---
Confidence 456789999999999999999999854 7899999976653 12 23456778999999998 99999999994
Q ss_pred cCCCCceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCC-
Q 005045 458 DLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKD- 536 (717)
Q Consensus 458 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~- 536 (717)
......++||||+.||.|.+++... +++.+.+++++++|++.|++|||+. ||+||||||+||+++.+
T Consensus 90 --~t~~~~~ivmEy~~gGdL~~~i~~~-------g~l~E~~ar~~F~Qlisav~y~H~~---gi~HRDLK~ENilld~~~ 157 (370)
T KOG0583|consen 90 --ATPTKIYIVMEYCSGGDLFDYIVNK-------GRLKEDEARKYFRQLISAVAYCHSR---GIVHRDLKPENILLDGNE 157 (370)
T ss_pred --ecCCeEEEEEEecCCccHHHHHHHc-------CCCChHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEecCCC
Confidence 4555799999999999999999874 6789999999999999999999998 99999999999999999
Q ss_pred CceEEeeeccchhcccccCCCCCCcceeecccccccccCCCccCCC--C-CcccchhhHHHHHHHHHhCCCCCCCCCCCc
Q 005045 537 MTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNGQ--V-SILGDIYSYGILLLEMFTGKRPTGDMFKDD 613 (717)
Q Consensus 537 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~-~~~sDvwslG~vl~elltg~~p~~~~~~~~ 613 (717)
+++||+|||++.... ..........|++.|+|||++.++ | +.++||||+||++|-|++|..||++....
T Consensus 158 ~~~Kl~DFG~s~~~~-------~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~- 229 (370)
T KOG0583|consen 158 GNLKLSDFGLSAISP-------GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVP- 229 (370)
T ss_pred CCEEEeccccccccC-------CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHH-
Confidence 999999999998752 223344567899999999998875 3 68999999999999999999999872111
Q ss_pred hhhhHHHHhcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHH-HHHHHHHhhccCCCCcCCC
Q 005045 614 FSIHMFVSMALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEEC-FVSVLRIGLMCSTTSPRER 692 (717)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~li~~cl~~~p~~R 692 (717)
.... .+....... +.-. +..+..++.+|+..+|.+|
T Consensus 230 -~l~~-----------ki~~~~~~~-------------------------------p~~~~S~~~~~Li~~mL~~~P~~R 266 (370)
T KOG0583|consen 230 -NLYR-----------KIRKGEFKI-------------------------------PSYLLSPEARSLIEKMLVPDPSTR 266 (370)
T ss_pred -HHHH-----------HHhcCCccC-------------------------------CCCcCCHHHHHHHHHHcCCCcccC
Confidence 1111 111111110 0111 3346789999999999999
Q ss_pred CCHHHHHHHHHHHH
Q 005045 693 IAMNVVVNNLKTIR 706 (717)
Q Consensus 693 ps~~eil~~l~~i~ 706 (717)
+|+.||+ .-.-++
T Consensus 267 ~t~~~i~-~h~w~~ 279 (370)
T KOG0583|consen 267 ITLLEIL-EHPWFQ 279 (370)
T ss_pred CCHHHHh-hChhhc
Confidence 9999998 433333
No 31
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=7.7e-39 Score=305.14 Aligned_cols=280 Identities=23% Similarity=0.254 Sum_probs=210.5
Q ss_pred ccccccccccccccCcccccceEEEEeC-CCchhhhHHhHhhh--hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCC
Q 005045 384 ISKSTDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQ--QGALKSFIDECNALKSTRHRNILRVITACSSVDLE 460 (717)
Q Consensus 384 ~~~~~~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~ 460 (717)
-+.+.++|++++.|++|.||.||+|+++ +++.||+|.++... .+..-...+|+.++.+++|||||.+-.+.+..
T Consensus 71 gCrsv~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~--- 147 (419)
T KOG0663|consen 71 GCRSVEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGS--- 147 (419)
T ss_pred CcccHHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEecc---
Confidence 3467789999999999999999999976 89999999998653 33445567899999999999999998886543
Q ss_pred CCceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceE
Q 005045 461 GNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAH 540 (717)
Q Consensus 461 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~k 540 (717)
+-+..|+|||||+ -+|...+...+ +.+...+++.++.|+++|++|||.+ .|+||||||+|++++..|.+|
T Consensus 148 ~~d~iy~VMe~~E-hDLksl~d~m~------q~F~~~evK~L~~QlL~glk~lH~~---wilHRDLK~SNLLm~~~G~lK 217 (419)
T KOG0663|consen 148 NMDKIYIVMEYVE-HDLKSLMETMK------QPFLPGEVKTLMLQLLRGLKHLHDN---WILHRDLKTSNLLLSHKGILK 217 (419)
T ss_pred ccceeeeeHHHHH-hhHHHHHHhcc------CCCchHHHHHHHHHHHHHHHHHhhc---eeEecccchhheeeccCCcEE
Confidence 3456999999996 48888887654 6799999999999999999999998 999999999999999999999
Q ss_pred EeeeccchhcccccCCCCCCcceeecccccccccCCCccCCC--CCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhH
Q 005045 541 VGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNGQ--VSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHM 618 (717)
Q Consensus 541 l~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~ 618 (717)
|+|||+|+.+..+ ....+...-|..|+|||++-|. |+.+.|+||+|||+.||+++++.|.+..+-++...-
T Consensus 218 iaDFGLAR~ygsp-------~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~I 290 (419)
T KOG0663|consen 218 IADFGLAREYGSP-------LKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKI 290 (419)
T ss_pred ecccchhhhhcCC-------cccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHH
Confidence 9999999987322 2233456789999999997663 899999999999999999999999876554443332
Q ss_pred HHHhcCChh--hhhhcCCCCC---CCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCC
Q 005045 619 FVSMALPDH--VMDILDPSMP---LDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERI 693 (717)
Q Consensus 619 ~~~~~~~~~--~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp 693 (717)
+.....|.. +..+-..... ..+...+...+... ..+ . -.+.=++|+...+.+||.+|.
T Consensus 291 f~llGtPte~iwpg~~~lp~~k~~~f~~~pyn~lr~kF----~~~------------~-lse~g~~Lln~llt~dP~kR~ 353 (419)
T KOG0663|consen 291 FKLLGTPSEAIWPGYSELPAVKKMTFSEHPYNNLRKKF----GAL------------S-LSEQGFDLLNKLLTYDPGKRI 353 (419)
T ss_pred HHHhCCCccccCCCccccchhhccccCCCCchhhhhhc----ccc------------c-cchhHHHHHHHHhccCccccc
Confidence 322222221 2221111100 00111111111100 000 0 124457899999999999999
Q ss_pred CHHHHHH
Q 005045 694 AMNVVVN 700 (717)
Q Consensus 694 s~~eil~ 700 (717)
||.|.++
T Consensus 354 tA~~~L~ 360 (419)
T KOG0663|consen 354 TAEDGLK 360 (419)
T ss_pred cHHHhhc
Confidence 9999875
No 32
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=6.8e-39 Score=311.77 Aligned_cols=247 Identities=23% Similarity=0.348 Sum_probs=205.2
Q ss_pred cccccccccccCcccccceEEEE-eCCCchhhhHHhHhhh---hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCC
Q 005045 387 STDNFSKENLIGTGSFGSVYKGT-LGDGTIVAIKVLKLQQ---QGALKSFIDECNALKSTRHRNILRVITACSSVDLEGN 462 (717)
Q Consensus 387 ~~~~y~~~~~ig~g~~g~v~~~~-~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~ 462 (717)
..-+|++.+.+|+|.||.|-+|. ++.|+.||||.+.... .+..-.+++|++||..++||||+.++.+ +++.
T Consensus 51 lkHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEV-----FENk 125 (668)
T KOG0611|consen 51 LKHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEV-----FENK 125 (668)
T ss_pred hhhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhh-----hcCC
Confidence 34589999999999999999999 5799999999998653 4456678999999999999999999999 7788
Q ss_pred ceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEe
Q 005045 463 DFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVG 542 (717)
Q Consensus 463 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~ 542 (717)
+...|||||..+|.|+||+.+. +.+++.+++.+++||++|+.|+|++ ++||||||.+||++|+++++||+
T Consensus 126 dKIvivMEYaS~GeLYDYiSer-------~~LsErEaRhfFRQIvSAVhYCHkn---rVvHRDLKLENILLD~N~NiKIA 195 (668)
T KOG0611|consen 126 DKIVIVMEYASGGELYDYISER-------GSLSEREARHFFRQIVSAVHYCHKN---RVVHRDLKLENILLDQNNNIKIA 195 (668)
T ss_pred ceEEEEEEecCCccHHHHHHHh-------ccccHHHHHHHHHHHHHHHHHHhhc---cceecccchhheeecCCCCeeee
Confidence 8999999999999999999876 7899999999999999999999998 99999999999999999999999
Q ss_pred eeccchhcccccCCCCCCcceeecccccccccCCCccCCCC--CcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHH
Q 005045 543 DFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNGQV--SILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFV 620 (717)
Q Consensus 543 Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~ 620 (717)
|||++..+ .....-..++|.+-|.+||++.|.+ ++.+|-|||||++|.|+.|..||++.+-.
T Consensus 196 DFGLSNly--------~~~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk-------- 259 (668)
T KOG0611|consen 196 DFGLSNLY--------ADKKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHK-------- 259 (668)
T ss_pred ccchhhhh--------ccccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHH--------
Confidence 99999876 1223345688999999999999873 79999999999999999999999875211
Q ss_pred HhcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHH
Q 005045 621 SMALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVN 700 (717)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~ 700 (717)
..+.++-.-+....+ . +....-+|++|+..+|++|.|+.+|..
T Consensus 260 -----~lvrQIs~GaYrEP~-----------------------~---------PSdA~gLIRwmLmVNP~RRATieDiAs 302 (668)
T KOG0611|consen 260 -----RLVRQISRGAYREPE-----------------------T---------PSDASGLIRWMLMVNPERRATIEDIAS 302 (668)
T ss_pred -----HHHHHhhcccccCCC-----------------------C---------CchHHHHHHHHHhcCcccchhHHHHhh
Confidence 111121111111100 0 222345889999999999999999875
Q ss_pred H
Q 005045 701 N 701 (717)
Q Consensus 701 ~ 701 (717)
.
T Consensus 303 H 303 (668)
T KOG0611|consen 303 H 303 (668)
T ss_pred h
Confidence 4
No 33
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.4e-40 Score=323.89 Aligned_cols=250 Identities=24% Similarity=0.349 Sum_probs=206.7
Q ss_pred ccccccccccccCcccccceEEEEe-CCCchhhhHHhHhhh-hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCc
Q 005045 386 KSTDNFSKENLIGTGSFGSVYKGTL-GDGTIVAIKVLKLQQ-QGALKSFIDECNALKSTRHRNILRVITACSSVDLEGND 463 (717)
Q Consensus 386 ~~~~~y~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~ 463 (717)
.....|+..+.||+|.||.||+|.+ .+++.||+|++.... ......++.|+.++.+++++||.++|+.+ -.+.
T Consensus 10 ~~~~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsy-----l~g~ 84 (467)
T KOG0201|consen 10 DPELLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSY-----LKGT 84 (467)
T ss_pred CcccccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhhe-----eecc
Confidence 3455788899999999999999995 489999999998764 33467889999999999999999999984 3455
Q ss_pred eEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEee
Q 005045 464 FKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGD 543 (717)
Q Consensus 464 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~D 543 (717)
.++++|||+.||++.+.++.. ..+.+..+.-++++++.|+.|+|.. +.+|||||+.||++..+|.||++|
T Consensus 85 ~LwiiMey~~gGsv~~lL~~~-------~~~~E~~i~~ilre~l~~l~ylH~~---~kiHrDIKaanil~s~~g~vkl~D 154 (467)
T KOG0201|consen 85 KLWIIMEYCGGGSVLDLLKSG-------NILDEFEIAVILREVLKGLDYLHSE---KKIHRDIKAANILLSESGDVKLAD 154 (467)
T ss_pred cHHHHHHHhcCcchhhhhccC-------CCCccceeeeehHHHHHHhhhhhhc---ceecccccccceeEeccCcEEEEe
Confidence 899999999999999999865 3447778888999999999999998 999999999999999999999999
Q ss_pred eccchhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHHHh
Q 005045 544 FGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVSM 622 (717)
Q Consensus 544 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~ 622 (717)
||.+..+. ........+.||+.|||||++.+ .|+.++||||||++.+||.+|.+|+.+..+.... .
T Consensus 155 fgVa~ql~-------~~~~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvl------f 221 (467)
T KOG0201|consen 155 FGVAGQLT-------NTVKRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVL------F 221 (467)
T ss_pred cceeeeee-------chhhccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEE------E
Confidence 99998762 22333367889999999999876 5999999999999999999999999876552211 1
Q ss_pred cCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHH
Q 005045 623 ALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVN 700 (717)
Q Consensus 623 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~ 700 (717)
.+| +.-+.. ....+...+.+|+..|++.+|+.||||.++++
T Consensus 222 lIp--------k~~PP~-----------------------------L~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLK 262 (467)
T KOG0201|consen 222 LIP--------KSAPPR-----------------------------LDGDFSPPFKEFVEACLDKNPEFRPSAKELLK 262 (467)
T ss_pred ecc--------CCCCCc-----------------------------cccccCHHHHHHHHHHhhcCcccCcCHHHHhh
Confidence 111 111111 11134667899999999999999999999985
No 34
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-38 Score=307.27 Aligned_cols=287 Identities=22% Similarity=0.276 Sum_probs=210.8
Q ss_pred ccccccccccccccCcccccceEEEEeC-CCchhhhHHhH--hhhhhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCC
Q 005045 384 ISKSTDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLK--LQQQGALKSFIDECNALKSTRHRNILRVITACSSVDLE 460 (717)
Q Consensus 384 ~~~~~~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~--~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~ 460 (717)
.......|..++.||+|++|.|+.|.++ +|+.||+|.+. .......++..+|+++++.++|+||+.+.+.......+
T Consensus 17 ~~~i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~ 96 (359)
T KOG0660|consen 17 LFEIPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRD 96 (359)
T ss_pred EEeccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeeccccccc
Confidence 3345567777899999999999999965 89999999997 34455678899999999999999999999987664445
Q ss_pred CCceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceE
Q 005045 461 GNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAH 540 (717)
Q Consensus 461 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~k 540 (717)
.-...|+|+|+| +.+|...++.+ +.++...+..++.||++|+.|+|+. +|+|||+||+|++++.++.+|
T Consensus 97 ~f~DvYiV~elM-etDL~~iik~~-------~~L~d~H~q~f~YQiLrgLKyiHSA---nViHRDLKPsNll~n~~c~lK 165 (359)
T KOG0660|consen 97 KFNDVYLVFELM-ETDLHQIIKSQ-------QDLTDDHAQYFLYQILRGLKYIHSA---NVIHRDLKPSNLLLNADCDLK 165 (359)
T ss_pred ccceeEEehhHH-hhHHHHHHHcC-------ccccHHHHHHHHHHHHHhcchhhcc---cccccccchhheeeccCCCEE
Confidence 556799999999 67899999865 5589999999999999999999998 999999999999999999999
Q ss_pred EeeeccchhcccccCCCCCCcceeecccccccccCCCcc-C-CCCCcccchhhHHHHHHHHHhCCCCCCCCCCCch-hhh
Q 005045 541 VGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHM-N-GQVSILGDIYSYGILLLEMFTGKRPTGDMFKDDF-SIH 617 (717)
Q Consensus 541 l~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~-~-~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~-~~~ 617 (717)
|+|||+|+..... .....-+.+..|..|+|||++ . .+|+.+.||||+||++.||++|+..|.+.+.-+. ..-
T Consensus 166 I~DFGLAR~~~~~-----~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI 240 (359)
T KOG0660|consen 166 ICDFGLARYLDKF-----FEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLI 240 (359)
T ss_pred eccccceeecccc-----CcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHH
Confidence 9999999987332 122233557789999999994 3 3699999999999999999999999976532211 111
Q ss_pred HHHHhcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHH
Q 005045 618 MFVSMALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNV 697 (717)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~e 697 (717)
.......++.....+. .+.+...++ ..+..+...-....+.......+++.+||..||.+|+|++|
T Consensus 241 ~~~lGtP~~e~l~~i~----------s~~ar~yi~----slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~e 306 (359)
T KOG0660|consen 241 LELLGTPSEEDLQKIR----------SEKARPYIK----SLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEE 306 (359)
T ss_pred HHhcCCCCHHHHHHhc----------cHHHHHHHH----hCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHH
Confidence 1111111111100000 000000000 00011111111222334556789999999999999999999
Q ss_pred HHH
Q 005045 698 VVN 700 (717)
Q Consensus 698 il~ 700 (717)
.++
T Consensus 307 AL~ 309 (359)
T KOG0660|consen 307 ALA 309 (359)
T ss_pred Hhc
Confidence 986
No 35
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=6.5e-39 Score=324.42 Aligned_cols=245 Identities=32% Similarity=0.458 Sum_probs=203.5
Q ss_pred cccccccccCcccccceEEEEeC-CCchhhhHHhHhhh--hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceE
Q 005045 389 DNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQ--QGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFK 465 (717)
Q Consensus 389 ~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~ 465 (717)
++|-+.+.||+|.||.||+|+.+ +.+.||+|.+.+.. .+..+.+.+|++++++++||||+.+++. ++...+.
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~es-----fEt~~~~ 76 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLES-----FETSAHL 76 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHh-----hcccceE
Confidence 57899999999999999999966 89999999997654 3456789999999999999999999999 6777899
Q ss_pred EEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeec
Q 005045 466 ALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFG 545 (717)
Q Consensus 466 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg 545 (717)
|+|+||+.| +|..++... +.++++.++.++.+++.||.|||++ +|.|||+||+||+++..|.+|++|||
T Consensus 77 ~vVte~a~g-~L~~il~~d-------~~lpEe~v~~~a~~LVsaL~yLhs~---rilhrd~kPqniLl~~~~~~KlcdFg 145 (808)
T KOG0597|consen 77 WVVTEYAVG-DLFTILEQD-------GKLPEEQVRAIAYDLVSALYYLHSN---RILHRDMKPQNILLEKGGTLKLCDFG 145 (808)
T ss_pred EEEehhhhh-hHHHHHHhc-------cCCCHHHHHHHHHHHHHHHHHHHhc---CcccccCCcceeeecCCCceeechhh
Confidence 999999965 999999855 7899999999999999999999998 99999999999999999999999999
Q ss_pred cchhcccccCCCCCCcceeecccccccccCCCccCCC-CCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHHHhcC
Q 005045 546 LAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNGQ-VSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVSMAL 624 (717)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~ 624 (717)
+|+-+ ......-..+.||+-|||||+..++ |+..+|+||+||++||+++|++||... ++.
T Consensus 146 ~Ar~m-------~~~t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~-----si~------- 206 (808)
T KOG0597|consen 146 LARAM-------STNTSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYAR-----SIT------- 206 (808)
T ss_pred hhhhc-------ccCceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHH-----HHH-------
Confidence 99976 2233344567899999999997765 899999999999999999999999542 111
Q ss_pred ChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHH
Q 005045 625 PDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVN 700 (717)
Q Consensus 625 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~ 700 (717)
..+..+......+. .+....+..|+...++.||..|.|..+++.
T Consensus 207 -~Lv~~I~~d~v~~p-------------------------------~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~ 250 (808)
T KOG0597|consen 207 -QLVKSILKDPVKPP-------------------------------STASSSFVNFLQGLLIKDPAQRLTWTDLLG 250 (808)
T ss_pred -HHHHHHhcCCCCCc-------------------------------ccccHHHHHHHHHHhhcChhhcccHHHHhc
Confidence 11112221111111 122556788999999999999999999874
No 36
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.4e-38 Score=350.39 Aligned_cols=270 Identities=27% Similarity=0.464 Sum_probs=219.4
Q ss_pred ccccccccccCcccccceEEEEeC--CCc----hhhhHHhHhh-hhhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCC
Q 005045 388 TDNFSKENLIGTGSFGSVYKGTLG--DGT----IVAIKVLKLQ-QQGALKSFIDECNALKSTRHRNILRVITACSSVDLE 460 (717)
Q Consensus 388 ~~~y~~~~~ig~g~~g~v~~~~~~--~~~----~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~ 460 (717)
..+-+..+.||+|+||.||.|... .|. .||+|.+... +.+....|.+|..+|+.++||||+++++.|.+
T Consensus 691 ~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~---- 766 (1025)
T KOG1095|consen 691 RKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLD---- 766 (1025)
T ss_pred hhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecC----
Confidence 456677899999999999999944 343 3888888754 45667899999999999999999999999854
Q ss_pred CCceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceE
Q 005045 461 GNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAH 540 (717)
Q Consensus 461 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~k 540 (717)
....+|++|||.||+|..++++.+....+...++..+...++.|||+|+.||+++ ++|||||.++|+|++....||
T Consensus 767 -~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~---~fvHRDLAaRNCLL~~~r~VK 842 (1025)
T KOG1095|consen 767 -SGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESK---HFVHRDLAARNCLLDERRVVK 842 (1025)
T ss_pred -CCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhC---CCcCcchhhhheeecccCcEE
Confidence 4478999999999999999998766655667899999999999999999999997 999999999999999999999
Q ss_pred EeeeccchhcccccCCCCCCcceeecccccccccCCCcc-CCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCCchhhhH
Q 005045 541 VGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHM-NGQVSILGDIYSYGILLLEMFT-GKRPTGDMFKDDFSIHM 618 (717)
Q Consensus 541 l~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~-~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~ 618 (717)
|+|||+|+.+...+. +.......-+..|||||.+ .+.++.|+|||||||++||++| |..||......+.....
T Consensus 843 IaDFGlArDiy~~~y-----yr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~~ 917 (1025)
T KOG1095|consen 843 IADFGLARDIYDKDY-----YRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLDV 917 (1025)
T ss_pred EcccchhHhhhhchh-----eeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHHH
Confidence 999999995522221 1111122345789999995 5789999999999999999999 99999775433221111
Q ss_pred HHHhcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHH
Q 005045 619 FVSMALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVV 698 (717)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ei 698 (717)
.... -.+.+..|+..+.+++.+||+.+|++||++..|
T Consensus 918 ~~gg-------------------------------------------RL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i 954 (1025)
T KOG1095|consen 918 LEGG-------------------------------------------RLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTI 954 (1025)
T ss_pred HhCC-------------------------------------------ccCCCCCCChHHHHHHHHHccCChhhCccHHHH
Confidence 1111 122566789999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhh
Q 005045 699 VNNLKTIRNCFLEFK 713 (717)
Q Consensus 699 l~~l~~i~~~~~~~~ 713 (717)
++.+..+.+......
T Consensus 955 ~~q~~~i~~~~~~~~ 969 (1025)
T KOG1095|consen 955 VEQDPAISNAALGTI 969 (1025)
T ss_pred HhhhhhhhhhhccCc
Confidence 999999987765443
No 37
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=1.3e-37 Score=318.83 Aligned_cols=250 Identities=23% Similarity=0.332 Sum_probs=197.8
Q ss_pred cccCcccccceEEEEeCCCchhhhHHhHhhhh---hHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceEEEEEec
Q 005045 395 NLIGTGSFGSVYKGTLGDGTIVAIKVLKLQQQ---GALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFKALVFEF 471 (717)
Q Consensus 395 ~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~lv~e~ 471 (717)
..+++|+++.||+|.+ +|+.||+|.+..... ...+.+.+|++++++++||||+++++++.+. .+.....++||||
T Consensus 26 ~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~-~~~~~~~~lv~Ey 103 (283)
T PHA02988 26 VLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDI-VDDLPRLSLILEY 103 (283)
T ss_pred eEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEec-ccCCCceEEEEEe
Confidence 5689999999999998 688999999875432 2257788999999999999999999987542 1234578999999
Q ss_pred CCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeeccchhcc
Q 005045 472 MSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLF 551 (717)
Q Consensus 472 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~ 551 (717)
+++|+|.+++... +.+++..+..++.+++.|++|||+.. +++||||||+||+++.++.+||+|||.+....
T Consensus 104 ~~~g~L~~~l~~~-------~~~~~~~~~~i~~~i~~~l~~lH~~~--~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~ 174 (283)
T PHA02988 104 CTRGYLREVLDKE-------KDLSFKTKLDMAIDCCKGLYNLYKYT--NKPYKNLTSVSFLVTENYKLKIICHGLEKILS 174 (283)
T ss_pred CCCCcHHHHHhhC-------CCCChhHHHHHHHHHHHHHHHHHhcC--CCCCCcCChhhEEECCCCcEEEcccchHhhhc
Confidence 9999999999754 46888999999999999999999842 78899999999999999999999999987652
Q ss_pred cccCCCCCCcceeecccccccccCCCccCC---CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHHHhcCChhh
Q 005045 552 EISDNPSKNQTVSIGLKGSIGYIPPEHMNG---QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVSMALPDHV 628 (717)
Q Consensus 552 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~---~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 628 (717)
.. .....++..|+|||++.+ .++.++|||||||++|||++|..||......+ .....
T Consensus 175 ~~----------~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~--~~~~i-------- 234 (283)
T PHA02988 175 SP----------PFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKE--IYDLI-------- 234 (283)
T ss_pred cc----------cccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHH--HHHHH--------
Confidence 11 112357889999999754 58999999999999999999999997542211 10000
Q ss_pred hhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHHHHHHHHH
Q 005045 629 MDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVNNLKTIRN 707 (717)
Q Consensus 629 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~~l~~i~~ 707 (717)
....... ..+..++..+.+++.+||+.+|++|||++|+++.|++++.
T Consensus 235 ---~~~~~~~-----------------------------~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~~ 281 (283)
T PHA02988 235 ---INKNNSL-----------------------------KLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYKF 281 (283)
T ss_pred ---HhcCCCC-----------------------------CCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHHh
Confidence 0000000 0111346678999999999999999999999999998864
No 38
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=4.6e-38 Score=338.83 Aligned_cols=281 Identities=22% Similarity=0.262 Sum_probs=219.1
Q ss_pred CCcccccccccccccccccCcccccceEEEEeCCC-chhhhHHhHhhhhhHHHHHHHHHHHHhcCC-CCceeEEEEe-ec
Q 005045 379 MSYSDISKSTDNFSKENLIGTGSFGSVYKGTLGDG-TIVAIKVLKLQQQGALKSFIDECNALKSTR-HRNILRVITA-CS 455 (717)
Q Consensus 379 ~s~~~~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~-~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~ni~~~~~~-~~ 455 (717)
+...-+..-.-+++|.+.|.+|||+.||+|++..+ ..||+|++-..+..+.+.+.+|+++|+.|. |+|||.+++. ..
T Consensus 27 ~~G~~~~Vg~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~ 106 (738)
T KOG1989|consen 27 FVGQTFTVGSHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAI 106 (738)
T ss_pred CCceEEEECCEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccc
Confidence 33444455566889999999999999999996644 999999998888888999999999999995 9999999993 33
Q ss_pred cccCCC-CceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeC
Q 005045 456 SVDLEG-NDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLD 534 (717)
Q Consensus 456 ~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~ 534 (717)
...... .-.+.|.||||+||.|-|++..+.. ..+++.++++|+.++++|+++||.. ..+++|||||-+||||+
T Consensus 107 ~~~~~~~~~EvllLmEyC~gg~Lvd~mn~Rlq-----~~lte~eVLkIf~dv~~AVa~mH~~-~pPiIHRDLKiENvLls 180 (738)
T KOG1989|consen 107 NRSSNNGVWEVLLLMEYCKGGSLVDFMNTRLQ-----TRLTEDEVLKIFYDVCEAVAAMHYL-KPPIIHRDLKIENVLLS 180 (738)
T ss_pred cccCCCceeEEEeehhhccCCcHHHHHHHHHh-----ccCChHHHHHHHHHHHHHHHHHhcC-CCccchhhhhhhheEEc
Confidence 222222 2468899999999999999985532 4599999999999999999999996 45699999999999999
Q ss_pred CCCceEEeeeccchhcccccCCCCCC--cceeecccccccccCCCcc---CC-CCCcccchhhHHHHHHHHHhCCCCCCC
Q 005045 535 KDMTAHVGDFGLAKFLFEISDNPSKN--QTVSIGLKGSIGYIPPEHM---NG-QVSILGDIYSYGILLLEMFTGKRPTGD 608 (717)
Q Consensus 535 ~~~~~kl~Dfg~~~~~~~~~~~~~~~--~~~~~~~~~~~~y~aPE~~---~~-~~~~~sDvwslG~vl~elltg~~p~~~ 608 (717)
.+|+.||||||.+............. .........|+.|+|||++ .| .+++|+|||||||+||.|+....||.+
T Consensus 181 ~~g~~KLCDFGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~ 260 (738)
T KOG1989|consen 181 ADGNYKLCDFGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEE 260 (738)
T ss_pred CCCCEEeCcccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCc
Confidence 99999999999997653222110000 0011123479999999994 34 379999999999999999999999976
Q ss_pred CCCCchhhhHHHHhcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCC
Q 005045 609 MFKDDFSIHMFVSMALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTS 688 (717)
Q Consensus 609 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~ 688 (717)
...-. +++-.... +..+.++..+.+||..||+.+
T Consensus 261 sg~la-----------------Ilng~Y~~-----------------------------P~~p~ys~~l~~LI~~mL~~n 294 (738)
T KOG1989|consen 261 SGKLA-----------------ILNGNYSF-----------------------------PPFPNYSDRLKDLIRTMLQPN 294 (738)
T ss_pred Cccee-----------------EEeccccC-----------------------------CCCccHHHHHHHHHHHHhccC
Confidence 42221 12212111 122445888999999999999
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHh
Q 005045 689 PRERIAMNVVVNNLKTIRNCFLE 711 (717)
Q Consensus 689 p~~Rps~~eil~~l~~i~~~~~~ 711 (717)
|++||++-+|+..+.+++..-+.
T Consensus 295 P~~RPnI~Qv~~~~~~l~~~~~~ 317 (738)
T KOG1989|consen 295 PDERPNIYQVLEEIFELANKPCP 317 (738)
T ss_pred cccCCCHHHHHHHHHHHhcCCCC
Confidence 99999999999999999865443
No 39
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=6.4e-38 Score=323.90 Aligned_cols=249 Identities=23% Similarity=0.336 Sum_probs=204.9
Q ss_pred cccccccccccCcccccceEEEEe-CCCchhhhHHhHhhh---hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCC
Q 005045 387 STDNFSKENLIGTGSFGSVYKGTL-GDGTIVAIKVLKLQQ---QGALKSFIDECNALKSTRHRNILRVITACSSVDLEGN 462 (717)
Q Consensus 387 ~~~~y~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~ 462 (717)
..+-|...+.+|.|+.|.|-+|++ .+|+.+|||++.... ......+.+|+-+|+-+.|||++.+|++ .++.
T Consensus 10 tiGpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydV-----we~~ 84 (786)
T KOG0588|consen 10 TIGPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDV-----WENK 84 (786)
T ss_pred cccceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeee-----eccC
Confidence 456789999999999999999995 499999999998652 2335678899999999999999999999 5566
Q ss_pred ceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEe
Q 005045 463 DFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVG 542 (717)
Q Consensus 463 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~ 542 (717)
.++|+|.||++||-|.+++-+. +.+++.++.++++||+.|+.|||.. +|+|||+||+|++++..+++||+
T Consensus 85 ~~lylvlEyv~gGELFdylv~k-------G~l~e~eaa~ff~QIi~gv~yCH~~---~icHRDLKpENlLLd~~~nIKIA 154 (786)
T KOG0588|consen 85 QHLYLVLEYVPGGELFDYLVRK-------GPLPEREAAHFFRQILDGVSYCHAF---NICHRDLKPENLLLDVKNNIKIA 154 (786)
T ss_pred ceEEEEEEecCCchhHHHHHhh-------CCCCCHHHHHHHHHHHHHHHHHhhh---cceeccCCchhhhhhcccCEeee
Confidence 6999999999999999998765 6799999999999999999999998 99999999999999999999999
Q ss_pred eeccchhcccccCCCCCCcceeecccccccccCCCccCCC-C-CcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHH
Q 005045 543 DFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNGQ-V-SILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFV 620 (717)
Q Consensus 543 Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~-~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~ 620 (717)
|||+|..- .....-.+.+|.+.|.|||++.|+ | +.++||||+|||+|.|+||+.||++. .-..+...+
T Consensus 155 DFGMAsLe--------~~gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDd--Nir~LLlKV 224 (786)
T KOG0588|consen 155 DFGMASLE--------VPGKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDD--NIRVLLLKV 224 (786)
T ss_pred ccceeecc--------cCCccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCc--cHHHHHHHH
Confidence 99999752 233344567899999999998886 4 89999999999999999999999742 111111111
Q ss_pred HhcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHH
Q 005045 621 SMALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVN 700 (717)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~ 700 (717)
... ... -+.+.+.+..+|+.+|+..||++|.|++||++
T Consensus 225 ~~G-----------~f~-------------------------------MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~k 262 (786)
T KOG0588|consen 225 QRG-----------VFE-------------------------------MPSNISSEAQDLLRRMLDVDPSTRITTEEILK 262 (786)
T ss_pred HcC-----------ccc-------------------------------CCCcCCHHHHHHHHHHhccCccccccHHHHhh
Confidence 111 000 11112455678999999999999999999987
Q ss_pred HH
Q 005045 701 NL 702 (717)
Q Consensus 701 ~l 702 (717)
.-
T Consensus 263 HP 264 (786)
T KOG0588|consen 263 HP 264 (786)
T ss_pred Cc
Confidence 54
No 40
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1e-38 Score=310.25 Aligned_cols=283 Identities=24% Similarity=0.297 Sum_probs=202.4
Q ss_pred cccccccccccCcccccceEEEEe-CCCchhhhHHhHhhhhhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceE
Q 005045 387 STDNFSKENLIGTGSFGSVYKGTL-GDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFK 465 (717)
Q Consensus 387 ~~~~y~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~ 465 (717)
..-.|+..+.+|+|+||.||.|.. .+++.||||..-.+.+ .-.+|+++|+.++||||+++..++....-.+.-..
T Consensus 22 ~~i~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r----~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~l 97 (364)
T KOG0658|consen 22 VEISYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR----YKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYL 97 (364)
T ss_pred eEEEEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCC----cCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHH
Confidence 445788899999999999999994 4789999998875543 22369999999999999999988766542223356
Q ss_pred EEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCC-CceEEeee
Q 005045 466 ALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKD-MTAHVGDF 544 (717)
Q Consensus 466 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~-~~~kl~Df 544 (717)
.+||||+| .+|.++++.... ....++...++-++.||.+||+|||+. +|+||||||+|+++|.+ |.+||+||
T Consensus 98 nlVleymP-~tL~~~~r~~~~---~~~~mp~~~iKLYt~Qlfrgl~yLh~~---~IcHRDIKPqNlLvD~~tg~LKicDF 170 (364)
T KOG0658|consen 98 NLVLEYMP-ETLYRVIRHYTR---ANQRMPLLEIKLYTYQLFRGLAYLHSH---GICHRDIKPQNLLVDPDTGVLKICDF 170 (364)
T ss_pred HHHHHhch-HHHHHHHHHHhh---cCCCCceeeeHHHHHHHHHHHHHHHhc---CcccCCCChheEEEcCCCCeEEeccC
Confidence 79999997 599998874211 115688889999999999999999997 99999999999999955 99999999
Q ss_pred ccchhcccccCCCCCCcceeecccccccccCCCccCC--CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHHH-
Q 005045 545 GLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG--QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVS- 621 (717)
Q Consensus 545 g~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~- 621 (717)
|.|+.+.. ......+..+..|+|||.+-| +|+.+.||||.|||+.||+-|++-|.+.+..++ +.+.+.
T Consensus 171 GSAK~L~~--------~epniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQ-L~eIik~ 241 (364)
T KOG0658|consen 171 GSAKVLVK--------GEPNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQ-LVEIIKV 241 (364)
T ss_pred Ccceeecc--------CCCceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHH-HHHHHHH
Confidence 99998721 122244678899999999766 499999999999999999999999987543332 222221
Q ss_pred hcCCh--hhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHH
Q 005045 622 MALPD--HVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVV 699 (717)
Q Consensus 622 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil 699 (717)
...|. .+..+--...... +..+.... ... -.....+.+..+|+.++++++|.+|.++.|++
T Consensus 242 lG~Pt~e~I~~mn~~y~~~~----~p~ik~~~---------~~~----~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l 304 (364)
T KOG0658|consen 242 LGTPTREDIKSMNPNYTEFK----FPQIKAHP---------WHK----VFFKRLPPDALDLLSKLLQYSPSKRLSALEAL 304 (364)
T ss_pred hCCCCHHHHhhcCccccccc----Cccccccc---------cee----ecccCCCHHHHHHHHHHhccChhhcCCHHHHh
Confidence 12221 1222111111000 00000000 000 01112255678999999999999999999998
Q ss_pred H--HHHHHH
Q 005045 700 N--NLKTIR 706 (717)
Q Consensus 700 ~--~l~~i~ 706 (717)
+ ...+++
T Consensus 305 ~h~fFdelr 313 (364)
T KOG0658|consen 305 AHPFFDELR 313 (364)
T ss_pred cchhhHHhh
Confidence 4 344444
No 41
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=2.2e-37 Score=324.86 Aligned_cols=199 Identities=28% Similarity=0.448 Sum_probs=170.9
Q ss_pred ccccccccccCcccccceEEEEeC-CCchhhhHHhHhh-hhhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceE
Q 005045 388 TDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQ-QQGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFK 465 (717)
Q Consensus 388 ~~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~ 465 (717)
.++|++.+.||+|++|.||+++++ ++..+|+|.+... .......+.+|++++++++||||+++++++. .++..
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~~~~ 78 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFY-----SDGEI 78 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEE-----ECCEE
Confidence 578999999999999999999965 7888999988754 2344577899999999999999999999853 34589
Q ss_pred EEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeec
Q 005045 466 ALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFG 545 (717)
Q Consensus 466 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg 545 (717)
++||||+++++|.+++... ..+++..+..++.|++.|++|||+.+ +|+||||||+||+++.++.+||+|||
T Consensus 79 ~lv~e~~~~~~L~~~l~~~-------~~~~~~~~~~~~~~i~~~l~~lH~~~--~ivH~dlkp~Nil~~~~~~~kl~Dfg 149 (331)
T cd06649 79 SICMEHMDGGSLDQVLKEA-------KRIPEEILGKVSIAVLRGLAYLREKH--QIMHRDVKPSNILVNSRGEIKLCDFG 149 (331)
T ss_pred EEEeecCCCCcHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHhhcC--CEEcCCCChhhEEEcCCCcEEEccCc
Confidence 9999999999999999754 45889999999999999999999852 69999999999999999999999999
Q ss_pred cchhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHhCCCCCCCC
Q 005045 546 LAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRPTGDM 609 (717)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~ 609 (717)
.+...... ......|+..|+|||++.+ .++.++|||||||++|+|++|+.||...
T Consensus 150 ~~~~~~~~---------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~ 205 (331)
T cd06649 150 VSGQLIDS---------MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPP 205 (331)
T ss_pred cccccccc---------ccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCC
Confidence 98754211 1123458999999999765 4899999999999999999999999654
No 42
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=1.8e-37 Score=319.51 Aligned_cols=244 Identities=27% Similarity=0.354 Sum_probs=195.1
Q ss_pred cccccccccCcccccceEEEEeC-CCchhhhHHhHhhh---hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCce
Q 005045 389 DNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQ---QGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDF 464 (717)
Q Consensus 389 ~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 464 (717)
++|++.+.||+|+||.||+|..+ +++.||+|++.... ......+.+|++++++++||||+++++. +.+...
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~-----~~~~~~ 75 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWT-----EHDQRF 75 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhh-----hccCCe
Confidence 47999999999999999999965 78999999986432 2345678899999999999999999887 445568
Q ss_pred EEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeee
Q 005045 465 KALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDF 544 (717)
Q Consensus 465 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Df 544 (717)
.++||||+++++|.+++... ..+++..+..++.||+.||+|||++ +++||||||+||+++.+|.+||+||
T Consensus 76 ~~lv~e~~~~~~L~~~~~~~-------~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~NIli~~~~~~kl~Df 145 (291)
T cd05612 76 LYMLMEYVPGGELFSYLRNS-------GRFSNSTGLFYASEIVCALEYLHSK---EIVYRDLKPENILLDKEGHIKLTDF 145 (291)
T ss_pred EEEEEeCCCCCCHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEEec
Confidence 99999999999999998754 5688999999999999999999998 9999999999999999999999999
Q ss_pred ccchhcccccCCCCCCcceeecccccccccCCCccCCC-CCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHHHhc
Q 005045 545 GLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNGQ-VSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVSMA 623 (717)
Q Consensus 545 g~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~ 623 (717)
|.+..... ......|++.|+|||++.+. ++.++|||||||++|+|++|..||....... ....
T Consensus 146 g~~~~~~~----------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~--~~~~---- 209 (291)
T cd05612 146 GFAKKLRD----------RTWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFG--IYEK---- 209 (291)
T ss_pred CcchhccC----------CcccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHH----
Confidence 99876511 11224589999999997654 7899999999999999999999996542211 1000
Q ss_pred CChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCC-----HHHH
Q 005045 624 LPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIA-----MNVV 698 (717)
Q Consensus 624 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps-----~~ei 698 (717)
+....... +...+..+.+++.+||+.||.+||+ +.|+
T Consensus 210 -------i~~~~~~~-------------------------------~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~ 251 (291)
T cd05612 210 -------ILAGKLEF-------------------------------PRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDV 251 (291)
T ss_pred -------HHhCCcCC-------------------------------CccCCHHHHHHHHHHcCCCHHHccCCccCCHHHH
Confidence 00000000 0111445788999999999999995 8888
Q ss_pred HHH
Q 005045 699 VNN 701 (717)
Q Consensus 699 l~~ 701 (717)
++.
T Consensus 252 l~h 254 (291)
T cd05612 252 KNH 254 (291)
T ss_pred hcC
Confidence 754
No 43
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=6.1e-37 Score=317.97 Aligned_cols=268 Identities=22% Similarity=0.402 Sum_probs=197.4
Q ss_pred cccccccccccCcccccceEEEEeCC-----------------CchhhhHHhHhhh-hhHHHHHHHHHHHHhcCCCCcee
Q 005045 387 STDNFSKENLIGTGSFGSVYKGTLGD-----------------GTIVAIKVLKLQQ-QGALKSFIDECNALKSTRHRNIL 448 (717)
Q Consensus 387 ~~~~y~~~~~ig~g~~g~v~~~~~~~-----------------~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~ni~ 448 (717)
..++|++.++||+|+||.||+|.+.+ +..||+|.+.... ......+.+|++++++++||||+
T Consensus 3 ~~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv 82 (304)
T cd05096 3 PRGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNII 82 (304)
T ss_pred chhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCee
Confidence 35789999999999999999997532 3358999887542 33456788999999999999999
Q ss_pred EEEEeeccccCCCCceEEEEEecCCCCChhhhccCCCCCc------------ccccccCHHHHHHHHHHHHHHHHHHHhc
Q 005045 449 RVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEH------------YQFKKLSVIQRLNIAIDVASALDYLHHH 516 (717)
Q Consensus 449 ~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~------------~~~~~~~~~~~~~i~~~i~~~l~~LH~~ 516 (717)
++++++. +.+..++||||+++++|.+++....... .....+++..+.+++.||+.||+|||+.
T Consensus 83 ~~~~~~~-----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~ 157 (304)
T cd05096 83 RLLGVCV-----DEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSL 157 (304)
T ss_pred EEEEEEe-----cCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHC
Confidence 9999864 3457899999999999999886432100 1113578889999999999999999998
Q ss_pred CCCCeeecCCCCCCEEeCCCCceEEeeeccchhcccccCCCCCCcceeecccccccccCCCcc-CCCCCcccchhhHHHH
Q 005045 517 CDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHM-NGQVSILGDIYSYGIL 595 (717)
Q Consensus 517 ~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~-~~~~~~~sDvwslG~v 595 (717)
+|+||||||+||+++.++.+||+|||.+....... .........++..|+|||++ .+.++.++|||||||+
T Consensus 158 ---~ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~ 229 (304)
T cd05096 158 ---NFVHRDLATRNCLVGENLTIKIADFGMSRNLYAGD-----YYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVT 229 (304)
T ss_pred ---CccccCcchhheEEcCCccEEECCCccceecccCc-----eeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHH
Confidence 99999999999999999999999999987542111 11112223457789999995 4568999999999999
Q ss_pred HHHHHh--CCCCCCCCCCCchhhhHHHHhcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHH
Q 005045 596 LLEMFT--GKRPTGDMFKDDFSIHMFVSMALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEEC 673 (717)
Q Consensus 596 l~ellt--g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (717)
+|+|++ +..||....... ........+........ ...+..+
T Consensus 230 l~el~~~~~~~p~~~~~~~~--~~~~~~~~~~~~~~~~~----------------------------------~~~~~~~ 273 (304)
T cd05096 230 LWEILMLCKEQPYGELTDEQ--VIENAGEFFRDQGRQVY----------------------------------LFRPPPC 273 (304)
T ss_pred HHHHHHccCCCCCCcCCHHH--HHHHHHHHhhhcccccc----------------------------------ccCCCCC
Confidence 999987 566776542211 11111100000000000 0011234
Q ss_pred HHHHHHHhhccCCCCcCCCCCHHHHHHHHH
Q 005045 674 FVSVLRIGLMCSTTSPRERIAMNVVVNNLK 703 (717)
Q Consensus 674 ~~~l~~li~~cl~~~p~~Rps~~eil~~l~ 703 (717)
+..+.+++.+||+.+|++|||+.||.+.|+
T Consensus 274 ~~~~~~li~~cl~~~p~~RPs~~~i~~~l~ 303 (304)
T cd05096 274 PQGLYELMLQCWSRDCRERPSFSDIHAFLT 303 (304)
T ss_pred CHHHHHHHHHHccCCchhCcCHHHHHHHHh
Confidence 667899999999999999999999998875
No 44
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=2.5e-37 Score=326.20 Aligned_cols=280 Identities=21% Similarity=0.277 Sum_probs=198.7
Q ss_pred ccccccccCcccccceEEEEeC-CCchhhhHHhHhh--hhhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceEE
Q 005045 390 NFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQ--QQGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFKA 466 (717)
Q Consensus 390 ~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~ 466 (717)
+|++.++||+|+||.||.|+++ +++.||+|.+... .......+.+|+++++.++||||+++++++...........|
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 5899999999999999999965 7899999988643 223345688999999999999999999887544333334689
Q ss_pred EEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeecc
Q 005045 467 LVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGL 546 (717)
Q Consensus 467 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~ 546 (717)
+||||+. ++|.+++... ..+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||.
T Consensus 81 lv~e~~~-~~L~~~l~~~-------~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kL~Dfg~ 149 (338)
T cd07859 81 VVFELME-SDLHQVIKAN-------DDLTPEHHQFFLYQLLRALKYIHTA---NVFHRDLKPKNILANADCKLKICDFGL 149 (338)
T ss_pred EEEecCC-CCHHHHHHhc-------ccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEccCcc
Confidence 9999994 6899888754 4689999999999999999999998 999999999999999999999999999
Q ss_pred chhcccccCCCCCCcceeecccccccccCCCccCC---CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHHHhc
Q 005045 547 AKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG---QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVSMA 623 (717)
Q Consensus 547 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~---~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~ 623 (717)
+........ .........|+..|+|||++.+ .++.++|||||||++|+|++|+.||....... ....+...
T Consensus 150 ~~~~~~~~~----~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~--~~~~~~~~ 223 (338)
T cd07859 150 ARVAFNDTP----TAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVH--QLDLITDL 223 (338)
T ss_pred ccccccccC----ccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHH--HHHHHHHH
Confidence 875421111 1111233568999999999653 57899999999999999999999996542211 11111000
Q ss_pred C---C-hhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHH
Q 005045 624 L---P-DHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVV 699 (717)
Q Consensus 624 ~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil 699 (717)
. + .....+.. ....+.......... .........++..+.+++.+||+.+|++|||++|++
T Consensus 224 ~~~~~~~~~~~i~~-----------~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l 288 (338)
T cd07859 224 LGTPSPETISRVRN-----------EKARRYLSSMRKKQP----VPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEAL 288 (338)
T ss_pred hCCCCHHHHHHhhh-----------hhHHHHHHhhcccCC----CchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHh
Confidence 0 0 00000000 000011110000000 000001112345678999999999999999999998
Q ss_pred HH
Q 005045 700 NN 701 (717)
Q Consensus 700 ~~ 701 (717)
+.
T Consensus 289 ~h 290 (338)
T cd07859 289 AD 290 (338)
T ss_pred cC
Confidence 64
No 45
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=2.5e-37 Score=301.67 Aligned_cols=281 Identities=24% Similarity=0.347 Sum_probs=207.2
Q ss_pred ccccccccccCcccccceEEEEeC-CCchhhhHHhHhhhh--hHHHHHHHHHHHHhcCCCCc-eeEEEEeecccc-CCCC
Q 005045 388 TDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQQ--GALKSFIDECNALKSTRHRN-ILRVITACSSVD-LEGN 462 (717)
Q Consensus 388 ~~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~n-i~~~~~~~~~~~-~~~~ 462 (717)
...|..++++|+|+||.||+|+.+ +|+.||+|.+..... +......+|+.++++++|+| |+.+++++.... ....
T Consensus 10 ~~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~ 89 (323)
T KOG0594|consen 10 MFDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGI 89 (323)
T ss_pred HHHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeeccccccc
Confidence 456889999999999999999955 899999999986643 45677789999999999999 999999964322 1223
Q ss_pred ceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEe
Q 005045 463 DFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVG 542 (717)
Q Consensus 463 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~ 542 (717)
...++||||+ .-+|..++....... ..++...++.++.||+.|++|||++ +|+||||||+||+|+..|.+||+
T Consensus 90 ~~l~lvfe~~-d~DL~~ymd~~~~~~---~g~~~~~ik~~m~Qll~gl~~~H~~---~IlHRDLKPQNlLi~~~G~lKla 162 (323)
T KOG0594|consen 90 GKLYLVFEFL-DRDLKKYMDSLPKKP---QGLPPRLIKSFMRQLLRGLAFLHSH---GILHRDLKPQNLLISSSGVLKLA 162 (323)
T ss_pred ceEEEEEEee-cccHHHHHHhccccc---cCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCcceEEECCCCcEeee
Confidence 4789999999 469999998664211 3567789999999999999999998 99999999999999999999999
Q ss_pred eeccchhcccccCCCCCCcceeecccccccccCCCccCCC--CCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHH
Q 005045 543 DFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNGQ--VSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFV 620 (717)
Q Consensus 543 Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~ 620 (717)
|||+|+....+ .....+..+|..|+|||++-|. |+...||||+||+++||++++..|.+..+.+....-+-
T Consensus 163 DFGlAra~~ip-------~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~ 235 (323)
T KOG0594|consen 163 DFGLARAFSIP-------MRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFR 235 (323)
T ss_pred ccchHHHhcCC-------cccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHH
Confidence 99999965211 2224456689999999997654 88999999999999999999999988765433322222
Q ss_pred HhcCCh--hhhhhc---CCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCH
Q 005045 621 SMALPD--HVMDIL---DPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAM 695 (717)
Q Consensus 621 ~~~~~~--~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~ 695 (717)
....|. .+.... +-........+........ ........+++.+|++++|..|.||
T Consensus 236 ~lGtP~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~-------------------~~~~~~~~dll~~~L~y~p~~R~Sa 296 (323)
T KOG0594|consen 236 LLGTPNEKDWPGVSSLPDYKAPFPKWPGPKDLSSIL-------------------PKLDPDGIELLSKLLQYDPAKRISA 296 (323)
T ss_pred HcCCCCccCCCCccccccccccCcCCCCccchHHhc-------------------cccCccHHHHHHHHhccCcccCcCH
Confidence 222221 121111 1111110000011111000 0001356789999999999999999
Q ss_pred HHHHHH
Q 005045 696 NVVVNN 701 (717)
Q Consensus 696 ~eil~~ 701 (717)
+.++++
T Consensus 297 ~~al~h 302 (323)
T KOG0594|consen 297 KGALTH 302 (323)
T ss_pred HHHhcC
Confidence 999975
No 46
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=5.2e-38 Score=320.18 Aligned_cols=251 Identities=24% Similarity=0.324 Sum_probs=207.0
Q ss_pred ccccccccccCcccccceEEEEeC-CCchhhhHHhHhhh--hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCce
Q 005045 388 TDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQ--QGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDF 464 (717)
Q Consensus 388 ~~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 464 (717)
-++|..++.+|+|+||.++.++++ +++.+++|.+.... ...++....|+.+++++.||||+.+.+.+ ..++.
T Consensus 3 m~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~-----~~~~~ 77 (426)
T KOG0589|consen 3 MDNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSF-----EEDGQ 77 (426)
T ss_pred cchhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccch-----hcCCc
Confidence 468999999999999999999976 78889999987553 33456788999999999999999999995 33445
Q ss_pred -EEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEee
Q 005045 465 -KALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGD 543 (717)
Q Consensus 465 -~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~D 543 (717)
.+|||+|++||++.+.+.+... .-+++..+.+++.|++.|+.|||++ .|+|||||+.|||++.++.|||+|
T Consensus 78 ~l~Ivm~Y~eGg~l~~~i~~~k~-----~~f~E~~i~~~~~Q~~~av~ylH~~---~iLHRDlK~~Nifltk~~~VkLgD 149 (426)
T KOG0589|consen 78 LLCIVMEYCEGGDLAQLIKEQKG-----VLFPEERILKWFVQILLAVNYLHEN---RVLHRDLKCANIFLTKDKKVKLGD 149 (426)
T ss_pred eEEEEEeecCCCCHHHHHHHHhh-----ccccHHHHHHHHHHHHHHHHHHHhh---hhhcccchhhhhhccccCceeecc
Confidence 9999999999999999986532 5689999999999999999999987 999999999999999999999999
Q ss_pred eccchhcccccCCCCCCcceeecccccccccCCCccCCC-CCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHHHh
Q 005045 544 FGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNGQ-VSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVSM 622 (717)
Q Consensus 544 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~ 622 (717)
||+|+.+... ........||+.|+.||++.+. |+.|+|||||||++|||++-+++|...+-...
T Consensus 150 fGlaK~l~~~-------~~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~L-------- 214 (426)
T KOG0589|consen 150 FGLAKILNPE-------DSLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSEL-------- 214 (426)
T ss_pred hhhhhhcCCc-------hhhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHHH--------
Confidence 9999987221 2234557899999999998774 89999999999999999999999976532211
Q ss_pred cCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHHH
Q 005045 623 ALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVNN 701 (717)
Q Consensus 623 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~~ 701 (717)
+.++..... .+.+..+..++..++..|++.+|+.||++.+++.+
T Consensus 215 -----i~ki~~~~~------------------------------~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 215 -----ILKINRGLY------------------------------SPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred -----HHHHhhccC------------------------------CCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 111111111 11334447788999999999999999999999976
No 47
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=2.9e-37 Score=317.61 Aligned_cols=201 Identities=27% Similarity=0.433 Sum_probs=167.0
Q ss_pred ccccccccccCcccccceEEEEeC-CCchhhhHHhHhhh-hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceE
Q 005045 388 TDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQ-QGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFK 465 (717)
Q Consensus 388 ~~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~ 465 (717)
.++|++.++||.|+||.||+|..+ +++.||+|++.... ......+.+|++++++++||||+++++++ ...+..
T Consensus 4 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~-----~~~~~~ 78 (288)
T cd07871 4 LETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDII-----HTERCL 78 (288)
T ss_pred cccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEE-----cCCCeE
Confidence 357999999999999999999965 78899999886442 22345677899999999999999999984 345589
Q ss_pred EEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeec
Q 005045 466 ALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFG 545 (717)
Q Consensus 466 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg 545 (717)
++||||++ ++|.+++.... ..+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 79 ~lv~e~~~-~~l~~~l~~~~------~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~DfG 148 (288)
T cd07871 79 TLVFEYLD-SDLKQYLDNCG------NLMSMHNVKIFMFQLLRGLSYCHKR---KILHRDLKPQNLLINEKGELKLADFG 148 (288)
T ss_pred EEEEeCCC-cCHHHHHHhcC------CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEECcCc
Confidence 99999996 58998886442 4578899999999999999999997 99999999999999999999999999
Q ss_pred cchhcccccCCCCCCcceeecccccccccCCCccCC--CCCcccchhhHHHHHHHHHhCCCCCCCCC
Q 005045 546 LAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG--QVSILGDIYSYGILLLEMFTGKRPTGDMF 610 (717)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~sDvwslG~vl~elltg~~p~~~~~ 610 (717)
.+...... ........+++.|+|||++.+ .++.++||||+||++|+|++|+.||....
T Consensus 149 ~~~~~~~~-------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~ 208 (288)
T cd07871 149 LARAKSVP-------TKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGST 208 (288)
T ss_pred ceeeccCC-------CccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 98754111 111123457889999999654 47899999999999999999999997643
No 48
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=1.1e-36 Score=323.84 Aligned_cols=267 Identities=25% Similarity=0.372 Sum_probs=200.2
Q ss_pred cccccccccccccCcccccceEEEEeC------CCchhhhHHhHhhh-hhHHHHHHHHHHHHhcC-CCCceeEEEEeecc
Q 005045 385 SKSTDNFSKENLIGTGSFGSVYKGTLG------DGTIVAIKVLKLQQ-QGALKSFIDECNALKST-RHRNILRVITACSS 456 (717)
Q Consensus 385 ~~~~~~y~~~~~ig~g~~g~v~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~ 456 (717)
....++|++.+.||+|+||.||+|++. +++.||+|.+.... ......+.+|+++++.+ +|+||+++++.+.
T Consensus 34 ~~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~- 112 (374)
T cd05106 34 EFPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACT- 112 (374)
T ss_pred cccHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEec-
Confidence 345668999999999999999998842 34579999987542 33456788999999999 8999999999853
Q ss_pred ccCCCCceEEEEEecCCCCChhhhccCCCCC-------------------------------------------------
Q 005045 457 VDLEGNDFKALVFEFMSNGNLDQWLHPSPAE------------------------------------------------- 487 (717)
Q Consensus 457 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~------------------------------------------------- 487 (717)
..+..++||||+++|+|.+++......
T Consensus 113 ----~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (374)
T cd05106 113 ----HGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVS 188 (374)
T ss_pred ----CCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcc
Confidence 445899999999999999987532110
Q ss_pred --------------cccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeeccchhcccc
Q 005045 488 --------------HYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEI 553 (717)
Q Consensus 488 --------------~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~ 553 (717)
......+++..+++++.||+.||+|||+. +|+||||||+||+++.++.+||+|||.+......
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~---giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~ 265 (374)
T cd05106 189 SSSSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASK---NCIHRDVAARNVLLTDGRVAKICDFGLARDIMND 265 (374)
T ss_pred ccccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CEEeccCchheEEEeCCCeEEEeeceeeeeccCC
Confidence 00113478889999999999999999997 9999999999999999999999999998764211
Q ss_pred cCCCCCCcceeecccccccccCCCccC-CCCCcccchhhHHHHHHHHHh-CCCCCCCCCCCchhhhHHHHhcCChhhhhh
Q 005045 554 SDNPSKNQTVSIGLKGSIGYIPPEHMN-GQVSILGDIYSYGILLLEMFT-GKRPTGDMFKDDFSIHMFVSMALPDHVMDI 631 (717)
Q Consensus 554 ~~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 631 (717)
. .........++..|+|||++. +.++.++|||||||++|+|++ |..||........ ........
T Consensus 266 ~-----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~-~~~~~~~~-------- 331 (374)
T cd05106 266 S-----NYVVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSK-FYKMVKRG-------- 331 (374)
T ss_pred c-----ceeeccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHH-HHHHHHcc--------
Confidence 1 111112233566799999954 468999999999999999997 9999976432211 11111000
Q ss_pred cCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHHHHHHHH
Q 005045 632 LDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVNNLKTIR 706 (717)
Q Consensus 632 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~~l~~i~ 706 (717)
..... +...+..+.+++.+||+.+|++|||+.||++.|+++.
T Consensus 332 ~~~~~---------------------------------~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~~ 373 (374)
T cd05106 332 YQMSR---------------------------------PDFAPPEIYSIMKMCWNLEPTERPTFSQISQLIQRQL 373 (374)
T ss_pred cCccC---------------------------------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence 00000 0011456789999999999999999999999999864
No 49
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=3.2e-37 Score=323.08 Aligned_cols=197 Identities=28% Similarity=0.404 Sum_probs=170.3
Q ss_pred ccccccccccCcccccceEEEEeC-CCchhhhHHhHhhh---hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCc
Q 005045 388 TDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQ---QGALKSFIDECNALKSTRHRNILRVITACSSVDLEGND 463 (717)
Q Consensus 388 ~~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~ 463 (717)
.++|++.+.||+|+||.||+|+++ +++.||+|++.... ......+.+|++++++++||||+++++.+ .+++
T Consensus 17 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~-----~~~~ 91 (329)
T PTZ00263 17 LSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSF-----QDEN 91 (329)
T ss_pred chheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEE-----EcCC
Confidence 468999999999999999999965 78899999886432 23456788999999999999999999984 4456
Q ss_pred eEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEee
Q 005045 464 FKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGD 543 (717)
Q Consensus 464 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~D 543 (717)
..++||||+++++|.+++... ..+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 92 ~~~lv~e~~~~~~L~~~l~~~-------~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kl~D 161 (329)
T PTZ00263 92 RVYFLLEFVVGGELFTHLRKA-------GRFPNDVAKFYHAELVLAFEYLHSK---DIIYRDLKPENLLLDNKGHVKVTD 161 (329)
T ss_pred EEEEEEcCCCCChHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEECCCCCEEEee
Confidence 899999999999999998754 5688999999999999999999998 999999999999999999999999
Q ss_pred eccchhcccccCCCCCCcceeecccccccccCCCccCCC-CCcccchhhHHHHHHHHHhCCCCCCCC
Q 005045 544 FGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNGQ-VSILGDIYSYGILLLEMFTGKRPTGDM 609 (717)
Q Consensus 544 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~sDvwslG~vl~elltg~~p~~~~ 609 (717)
||.+..... ......|++.|+|||++.+. ++.++|||||||++|+|++|..||...
T Consensus 162 fg~~~~~~~----------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~ 218 (329)
T PTZ00263 162 FGFAKKVPD----------RTFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDD 218 (329)
T ss_pred ccCceEcCC----------CcceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCC
Confidence 999876411 11234689999999997654 789999999999999999999999653
No 50
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.5e-36 Score=323.76 Aligned_cols=277 Identities=21% Similarity=0.250 Sum_probs=195.6
Q ss_pred cccccccccccCcccccceEEEEeC-CCchhhhHHhHhhhhhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceE
Q 005045 387 STDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFK 465 (717)
Q Consensus 387 ~~~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~ 465 (717)
..++|++.+.||+|+||.||+|.+. +++.||+|... ...+.+|++++++++||||+++++++ ......
T Consensus 90 ~~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~------~~~~~~E~~il~~l~HpnIv~~~~~~-----~~~~~~ 158 (391)
T PHA03212 90 EKAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ------RGGTATEAHILRAINHPSIIQLKGTF-----TYNKFT 158 (391)
T ss_pred ccCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh------hhhhHHHHHHHHhCCCCCCCCEeEEE-----EECCee
Confidence 4568999999999999999999964 78999999754 24567899999999999999999985 345588
Q ss_pred EEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeec
Q 005045 466 ALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFG 545 (717)
Q Consensus 466 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg 545 (717)
++|||++. ++|.+++... ..+++..++.++.||+.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 159 ~lv~e~~~-~~L~~~l~~~-------~~l~~~~~~~i~~qi~~aL~ylH~~---~IvHrDiKP~NIll~~~~~vkL~DFG 227 (391)
T PHA03212 159 CLILPRYK-TDLYCYLAAK-------RNIAICDILAIERSVLRAIQYLHEN---RIIHRDIKAENIFINHPGDVCLGDFG 227 (391)
T ss_pred EEEEecCC-CCHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHhEEEcCCCCEEEEeCC
Confidence 99999994 7888887644 4588999999999999999999997 99999999999999999999999999
Q ss_pred cchhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHhCCCCCCCCCCCch------hhhH
Q 005045 546 LAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDF------SIHM 618 (717)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~------~~~~ 618 (717)
.+...... .........||+.|+|||++.+ .++.++|||||||++|||++|..||......+. .+..
T Consensus 228 ~a~~~~~~------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~ 301 (391)
T PHA03212 228 AACFPVDI------NANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKL 301 (391)
T ss_pred cccccccc------cccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHH
Confidence 98753211 1112234569999999999755 589999999999999999999988754321110 1110
Q ss_pred HHHhcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhh-hhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHH
Q 005045 619 FVSMALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHID-LEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNV 697 (717)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~e 697 (717)
.... .. ......+. .......+............ ..........+.+..+.+++.+||++||++||||+|
T Consensus 302 i~~~-~g-----~~p~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~e 372 (391)
T PHA03212 302 IIRR-SG-----THPNEFPI---DAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEA 372 (391)
T ss_pred HHHH-hc-----CChhhcCc---chhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHH
Confidence 0000 00 00000000 00111111110100000000 000111122234667889999999999999999999
Q ss_pred HHH
Q 005045 698 VVN 700 (717)
Q Consensus 698 il~ 700 (717)
+++
T Consensus 373 lL~ 375 (391)
T PHA03212 373 LLD 375 (391)
T ss_pred Hhc
Confidence 985
No 51
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=8.6e-37 Score=299.83 Aligned_cols=264 Identities=24% Similarity=0.341 Sum_probs=210.9
Q ss_pred ccccccccccccccccCcccccceEEEEeC-CCchhhhHHhHhhh---hhHHHHHHHHHHHHhcCCCCceeEEEEeeccc
Q 005045 382 SDISKSTDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQ---QGALKSFIDECNALKSTRHRNILRVITACSSV 457 (717)
Q Consensus 382 ~~~~~~~~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~ 457 (717)
.+..--.+.|+.++.+|+|.-|+||++..+ ++..+|+|++.... .....+.+.|.+||+.++||.++++|+.
T Consensus 70 ~~~~l~l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~---- 145 (459)
T KOG0610|consen 70 KDGSLGLRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYAS---- 145 (459)
T ss_pred CCCccCHHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhhe----
Confidence 344445678999999999999999999965 66899999997553 4456788899999999999999999999
Q ss_pred cCCCCceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCC
Q 005045 458 DLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDM 537 (717)
Q Consensus 458 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~ 537 (717)
++.++..|+|||||+||+|....++... +.+++..++.++..|+-||+|||-. |||+|||||+||||.++|
T Consensus 146 -fet~~~~cl~meyCpGGdL~~LrqkQp~-----~~fse~~aRFYaAEvl~ALEYLHml---GivYRDLKPENILvredG 216 (459)
T KOG0610|consen 146 -FETDKYSCLVMEYCPGGDLHSLRQKQPG-----KRFSESAARFYAAEVLLALEYLHML---GIVYRDLKPENILVREDG 216 (459)
T ss_pred -eeccceeEEEEecCCCccHHHHHhhCCC-----CccchhhHHHHHHHHHHHHHHHHhh---ceeeccCCcceeEEecCC
Confidence 6777899999999999999999887754 7899999999999999999999998 999999999999999999
Q ss_pred ceEEeeeccchhccc------c--------------------------c-CC----------------CCCCcceeeccc
Q 005045 538 TAHVGDFGLAKFLFE------I--------------------------S-DN----------------PSKNQTVSIGLK 568 (717)
Q Consensus 538 ~~kl~Dfg~~~~~~~------~--------------------------~-~~----------------~~~~~~~~~~~~ 568 (717)
++-|+||.++..... . . .. ..........+.
T Consensus 217 HIMLsDFDLS~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFV 296 (459)
T KOG0610|consen 217 HIMLSDFDLSLRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFV 296 (459)
T ss_pred cEEeeeccccccCCCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccc
Confidence 999999988755411 0 0 00 001112334577
Q ss_pred ccccccCCCccCCC-CCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHHHhcCChhhhhhcCCCCCCCCCCcHHHH
Q 005045 569 GSIGYIPPEHMNGQ-VSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVSMALPDHVMDILDPSMPLDEENDEEQI 647 (717)
Q Consensus 569 ~~~~y~aPE~~~~~-~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (717)
||..|.|||++.|. .+.++|+|+||+++|||+.|.-||.+...+.. +..++.+.+....
T Consensus 297 GThEYlAPEvI~G~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~T-------------l~NIv~~~l~Fp~------- 356 (459)
T KOG0610|consen 297 GTHEYLAPEVIRGEGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKET-------------LRNIVGQPLKFPE------- 356 (459)
T ss_pred cccccccceeeecCCCCchhhHHHHHHHHHHHHhCCCCcCCCCchhh-------------HHHHhcCCCcCCC-------
Confidence 99999999999886 89999999999999999999999988644321 2222332222211
Q ss_pred HHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCC----HHHHHH
Q 005045 648 EEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIA----MNVVVN 700 (717)
Q Consensus 648 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps----~~eil~ 700 (717)
.++.+....+||++.|.+||.+|-. |+||-+
T Consensus 357 ----------------------~~~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK~ 391 (459)
T KOG0610|consen 357 ----------------------EPEVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIKR 391 (459)
T ss_pred ----------------------CCcchhHHHHHHHHHhccChhhhhccccchHHhhc
Confidence 1123566789999999999999987 777643
No 52
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=6.5e-37 Score=310.56 Aligned_cols=257 Identities=29% Similarity=0.490 Sum_probs=205.3
Q ss_pred ccccccccccccCcccccceEEEEeCCCchhhhHHhHhhhhhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceE
Q 005045 386 KSTDNFSKENLIGTGSFGSVYKGTLGDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFK 465 (717)
Q Consensus 386 ~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~ 465 (717)
.+..+|++.++||.|++|.||.|..+.++.+++|.+..........+..|+++++.++|+||+++++.+. ..+..
T Consensus 3 ~~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~~ 77 (261)
T cd05148 3 RPREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCS-----VGEPV 77 (261)
T ss_pred CcHHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEe-----cCCCe
Confidence 5667899999999999999999998889999999988766555677889999999999999999999853 44578
Q ss_pred EEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeec
Q 005045 466 ALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFG 545 (717)
Q Consensus 466 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg 545 (717)
++||||+++++|.+++..... ..+++..++.++.||+.|++|||+. +++||||+|+||+++.++.+||+|||
T Consensus 78 ~lv~e~~~~~~L~~~~~~~~~-----~~~~~~~~~~~~~~i~~al~~lH~~---~i~h~dl~~~nilv~~~~~~kl~d~g 149 (261)
T cd05148 78 YIITELMEKGSLLAFLRSPEG-----QVLPVASLIDMACQVAEGMAYLEEQ---NSIHRDLAARNILVGEDLVCKVADFG 149 (261)
T ss_pred EEEEeecccCCHHHHHhcCCC-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccCcceEEEcCCceEEEcccc
Confidence 999999999999999976422 4679999999999999999999997 99999999999999999999999999
Q ss_pred cchhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHh-CCCCCCCCCCCchhhhHHHHhc
Q 005045 546 LAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFT-GKRPTGDMFKDDFSIHMFVSMA 623 (717)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~ 623 (717)
.+...... ........++..|+|||...+ .++.++|||||||++|+|++ |..||......+ .......
T Consensus 150 ~~~~~~~~-------~~~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~--~~~~~~~- 219 (261)
T cd05148 150 LARLIKED-------VYLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHE--VYDQITA- 219 (261)
T ss_pred chhhcCCc-------cccccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHH--HHHHHHh-
Confidence 98765211 111112335678999999654 58899999999999999998 899996542111 1000000
Q ss_pred CChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHHHHH
Q 005045 624 LPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVNNLK 703 (717)
Q Consensus 624 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~~l~ 703 (717)
.... +.+..++..+.+++.+||+.+|++|||++|+++.|+
T Consensus 220 -----------~~~~-----------------------------~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~ 259 (261)
T cd05148 220 -----------GYRM-----------------------------PCPAKCPQEIYKIMLECWAAEPEDRPSFKALREELD 259 (261)
T ss_pred -----------CCcC-----------------------------CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence 0000 011223566889999999999999999999999998
Q ss_pred HH
Q 005045 704 TI 705 (717)
Q Consensus 704 ~i 705 (717)
.+
T Consensus 260 ~~ 261 (261)
T cd05148 260 NI 261 (261)
T ss_pred cC
Confidence 63
No 53
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=9.4e-37 Score=313.24 Aligned_cols=251 Identities=24% Similarity=0.340 Sum_probs=194.1
Q ss_pred ccccccccCcccccceEEEEe-CCCchhhhHHhHhhh---hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceE
Q 005045 390 NFSKENLIGTGSFGSVYKGTL-GDGTIVAIKVLKLQQ---QGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFK 465 (717)
Q Consensus 390 ~y~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~ 465 (717)
.|+..+.||+|+||.||+|.+ .+|+.||+|.+.... ......+.+|+++++++.|++|+++++.+ .+.+..
T Consensus 1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~-----~~~~~~ 75 (285)
T cd05631 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAY-----ETKDAL 75 (285)
T ss_pred CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEE-----ccCCeE
Confidence 378889999999999999996 489999999876432 22345678899999999999999999884 445589
Q ss_pred EEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeec
Q 005045 466 ALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFG 545 (717)
Q Consensus 466 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg 545 (717)
++||||+++++|.+++..... ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.++|+|||
T Consensus 76 ~lv~e~~~~g~L~~~~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nill~~~~~~kl~Dfg 147 (285)
T cd05631 76 CLVLTIMNGGDLKFHIYNMGN-----PGFDEQRAIFYAAELCCGLEDLQRE---RIVYRDLKPENILLDDRGHIRISDLG 147 (285)
T ss_pred EEEEEecCCCcHHHHHHhhCC-----CCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeCC
Confidence 999999999999888754321 4588999999999999999999997 99999999999999999999999999
Q ss_pred cchhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHHHhcC
Q 005045 546 LAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVSMAL 624 (717)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~ 624 (717)
.+..... ........|+..|+|||++.+ .++.++|||||||++|+|++|+.||......... ......+
T Consensus 148 ~~~~~~~--------~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~--~~~~~~~ 217 (285)
T cd05631 148 LAVQIPE--------GETVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKR--EEVDRRV 217 (285)
T ss_pred CcEEcCC--------CCeecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhH--HHHHHHh
Confidence 9875411 111123468999999999755 5899999999999999999999999754321110 0000000
Q ss_pred ChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCC-----HHHHH
Q 005045 625 PDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIA-----MNVVV 699 (717)
Q Consensus 625 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps-----~~eil 699 (717)
. .... ..+.+.+..+.+++.+||+.+|++||+ ++|++
T Consensus 218 ~-------~~~~-------------------------------~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~ 259 (285)
T cd05631 218 K-------EDQE-------------------------------EYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVK 259 (285)
T ss_pred h-------cccc-------------------------------cCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHh
Confidence 0 0000 011122556788999999999999997 88888
Q ss_pred HH
Q 005045 700 NN 701 (717)
Q Consensus 700 ~~ 701 (717)
+.
T Consensus 260 ~h 261 (285)
T cd05631 260 QH 261 (285)
T ss_pred cC
Confidence 63
No 54
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=4e-37 Score=319.10 Aligned_cols=202 Identities=29% Similarity=0.462 Sum_probs=167.4
Q ss_pred cccccccccccCcccccceEEEEeC-CCchhhhHHhHhhhh-hHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCce
Q 005045 387 STDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQQ-GALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDF 464 (717)
Q Consensus 387 ~~~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 464 (717)
..++|++.++||+|+||.||.|..+ +++.||+|++..... .....+.+|+.+++.++||||+++++++ .....
T Consensus 3 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~-----~~~~~ 77 (303)
T cd07869 3 KADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDII-----HTKET 77 (303)
T ss_pred ccccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEE-----ecCCe
Confidence 3578999999999999999999965 788999999875432 2234677899999999999999999984 44568
Q ss_pred EEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeee
Q 005045 465 KALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDF 544 (717)
Q Consensus 465 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Df 544 (717)
.++||||++ +++.+++.... ..+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 78 ~~lv~e~~~-~~l~~~~~~~~------~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Df 147 (303)
T cd07869 78 LTLVFEYVH-TDLCQYMDKHP------GGLHPENVKLFLFQLLRGLSYIHQR---YILHRDLKPQNLLISDTGELKLADF 147 (303)
T ss_pred EEEEEECCC-cCHHHHHHhCC------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECCC
Confidence 999999995 68887776432 4578899999999999999999998 9999999999999999999999999
Q ss_pred ccchhcccccCCCCCCcceeecccccccccCCCccCC--CCCcccchhhHHHHHHHHHhCCCCCCCCC
Q 005045 545 GLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG--QVSILGDIYSYGILLLEMFTGKRPTGDMF 610 (717)
Q Consensus 545 g~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~sDvwslG~vl~elltg~~p~~~~~ 610 (717)
|.+...... ........+++.|+|||++.+ .++.++||||+||++|+|++|..||.+..
T Consensus 148 g~~~~~~~~-------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~ 208 (303)
T cd07869 148 GLARAKSVP-------SHTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMK 208 (303)
T ss_pred CcceeccCC-------CccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCc
Confidence 998643111 111123457899999999654 47889999999999999999999997653
No 55
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=6.2e-37 Score=320.24 Aligned_cols=240 Identities=23% Similarity=0.334 Sum_probs=189.5
Q ss_pred cccCcccccceEEEEeC-CCchhhhHHhHhhh---hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceEEEEEe
Q 005045 395 NLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQ---QGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFKALVFE 470 (717)
Q Consensus 395 ~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~lv~e 470 (717)
+.||+|+||.||+|+.+ +|+.||+|++.... ......+.+|++++++++||||+++++.+ ...+..|+|||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~-----~~~~~~~lv~e 75 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSF-----QTHDRLCFVME 75 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEE-----EcCCEEEEEEe
Confidence 46899999999999964 78999999886542 23446678899999999999999999884 44568999999
Q ss_pred cCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeeccchhc
Q 005045 471 FMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFL 550 (717)
Q Consensus 471 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~ 550 (717)
|+++++|.+++... ..+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||++...
T Consensus 76 ~~~~~~L~~~l~~~-------~~~~~~~~~~~~~qi~~~L~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~ 145 (323)
T cd05571 76 YANGGELFFHLSRE-------RVFSEDRARFYGAEIVSALGYLHSC---DVVYRDLKLENLMLDKDGHIKITDFGLCKEG 145 (323)
T ss_pred CCCCCcHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEeeCCCCccc
Confidence 99999999998754 5689999999999999999999998 9999999999999999999999999998753
Q ss_pred ccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHHHhcCChhhh
Q 005045 551 FEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVSMALPDHVM 629 (717)
Q Consensus 551 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 629 (717)
.. .........|++.|+|||++.+ .++.++||||+||++|||++|..||...... .....
T Consensus 146 ~~-------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~--~~~~~---------- 206 (323)
T cd05571 146 IS-------DGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--KLFEL---------- 206 (323)
T ss_pred cc-------CCCcccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHH--HHHHH----------
Confidence 11 1111233568999999999765 4899999999999999999999999653211 00000
Q ss_pred hhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCC-----CHHHHHH
Q 005045 630 DILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERI-----AMNVVVN 700 (717)
Q Consensus 630 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp-----s~~eil~ 700 (717)
+...... .+...+..+.+++.+||+.||++|| ++.|+++
T Consensus 207 -~~~~~~~-------------------------------~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~ 250 (323)
T cd05571 207 -ILMEEIR-------------------------------FPRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIME 250 (323)
T ss_pred -HHcCCCC-------------------------------CCCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHc
Confidence 0000000 0011245678899999999999999 7999875
No 56
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=8.8e-37 Score=310.29 Aligned_cols=255 Identities=25% Similarity=0.377 Sum_probs=198.4
Q ss_pred ccccccccccCcccccceEEEEeC----CCchhhhHHhHhhh-hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCC
Q 005045 388 TDNFSKENLIGTGSFGSVYKGTLG----DGTIVAIKVLKLQQ-QGALKSFIDECNALKSTRHRNILRVITACSSVDLEGN 462 (717)
Q Consensus 388 ~~~y~~~~~ig~g~~g~v~~~~~~----~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~ 462 (717)
.++|++.+.||+|+||.||+|.++ .+..||+|.++... ......+.+|+.++++++||||+++++.+. .+
T Consensus 4 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-----~~ 78 (266)
T cd05064 4 NKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVIT-----RG 78 (266)
T ss_pred hHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEe-----cC
Confidence 467999999999999999999753 46689999887542 334567889999999999999999999853 45
Q ss_pred ceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEe
Q 005045 463 DFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVG 542 (717)
Q Consensus 463 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~ 542 (717)
+..++||||+++++|.+++.... ..+++..++.++.||+.|++|||+. +++||||||+||+++.++.++++
T Consensus 79 ~~~~lv~e~~~~~~L~~~l~~~~------~~l~~~~~~~~~~~i~~al~~lH~~---~iiH~dikp~nili~~~~~~~l~ 149 (266)
T cd05064 79 NTMMIVTEYMSNGALDSFLRKHE------GQLVAGQLMGMLPGLASGMKYLSEM---GYVHKGLAAHKVLVNSDLVCKIS 149 (266)
T ss_pred CCcEEEEEeCCCCcHHHHHHhCC------CCCCHHHHHHHHHHHHHHHHHHHHC---CEeeccccHhhEEEcCCCcEEEC
Confidence 58999999999999999987542 4689999999999999999999998 99999999999999999999999
Q ss_pred eeccchhcccccCCCCCCcceeecccccccccCCCccC-CCCCcccchhhHHHHHHHHHh-CCCCCCCCCCCchhhhHHH
Q 005045 543 DFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMN-GQVSILGDIYSYGILLLEMFT-GKRPTGDMFKDDFSIHMFV 620 (717)
Q Consensus 543 Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~ 620 (717)
|||.+..... ..........++..|+|||.+. +.++.++|||||||++||+++ |..||......+ .....
T Consensus 150 dfg~~~~~~~------~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~--~~~~~ 221 (266)
T cd05064 150 GFRRLQEDKS------EAIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQD--VIKAV 221 (266)
T ss_pred CCcccccccc------cchhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHH--HHHHH
Confidence 9997764311 0011111223467899999964 458999999999999999876 999996542211 10000
Q ss_pred HhcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHH
Q 005045 621 SMALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVN 700 (717)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~ 700 (717)
. + ... .+.+..++..+.+++.+||+.+|++|||++||++
T Consensus 222 ~-----------~-~~~-----------------------------~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~ 260 (266)
T cd05064 222 E-----------D-GFR-----------------------------LPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHS 260 (266)
T ss_pred H-----------C-CCC-----------------------------CCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHH
Confidence 0 0 000 0012334667889999999999999999999999
Q ss_pred HHHHH
Q 005045 701 NLKTI 705 (717)
Q Consensus 701 ~l~~i 705 (717)
.|.++
T Consensus 261 ~l~~~ 265 (266)
T cd05064 261 ILSKM 265 (266)
T ss_pred HHHhh
Confidence 88764
No 57
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=5.1e-37 Score=313.54 Aligned_cols=256 Identities=23% Similarity=0.395 Sum_probs=212.1
Q ss_pred ccccccccCcccccceEEEEeC---CCc--hhhhHHhHhh-hhhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCc
Q 005045 390 NFSKENLIGTGSFGSVYKGTLG---DGT--IVAIKVLKLQ-QQGALKSFIDECNALKSTRHRNILRVITACSSVDLEGND 463 (717)
Q Consensus 390 ~y~~~~~ig~g~~g~v~~~~~~---~~~--~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~ 463 (717)
..+..++||.|-||.||.|... .|+ .||||.++.+ .....+.|..|+-+++.++||||+++++.|.+.
T Consensus 390 ~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e~------ 463 (974)
T KOG4257|consen 390 LITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQ------ 463 (974)
T ss_pred hccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeecc------
Confidence 3455788999999999999843 344 4889999874 345578899999999999999999999998653
Q ss_pred eEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEee
Q 005045 464 FKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGD 543 (717)
Q Consensus 464 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~D 543 (717)
..|||||.++.|-|..|++.+. ..++......++.||+.||+|||+. .+|||||..+||+|....-|||+|
T Consensus 464 P~WivmEL~~~GELr~yLq~nk------~sL~l~tL~ly~~Qi~talaYLeSk---rfVHRDIAaRNiLVsSp~CVKLaD 534 (974)
T KOG4257|consen 464 PMWIVMELAPLGELREYLQQNK------DSLPLRTLTLYCYQICTALAYLESK---RFVHRDIAARNILVSSPQCVKLAD 534 (974)
T ss_pred ceeEEEecccchhHHHHHHhcc------ccchHHHHHHHHHHHHHHHHHHHhh---chhhhhhhhhheeecCcceeeecc
Confidence 5899999999999999998775 5788889999999999999999997 999999999999999999999999
Q ss_pred eccchhcccccCCCCCCcceeecccccccccCCCccC-CCCCcccchhhHHHHHHHHHh-CCCCCCCCCCCchhhhHHHH
Q 005045 544 FGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMN-GQVSILGDIYSYGILLLEMFT-GKRPTGDMFKDDFSIHMFVS 621 (717)
Q Consensus 544 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~ 621 (717)
||+++.+.... +.......-+.-|||||.+. ++++.+||||.|||++||+++ |..||.+....+.-.....+
T Consensus 535 FGLSR~~ed~~------yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~iEnG 608 (974)
T KOG4257|consen 535 FGLSRYLEDDA------YYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGHIENG 608 (974)
T ss_pred cchhhhccccc------hhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccceEEEecCC
Confidence 99999873221 22222344577899999975 469999999999999999998 99999876554432222222
Q ss_pred hcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHHH
Q 005045 622 MALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVNN 701 (717)
Q Consensus 622 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~~ 701 (717)
.++ +.++.||..+..++.+||.++|.+||.+.||...
T Consensus 609 eRl-------------------------------------------P~P~nCPp~LYslmskcWayeP~kRPrftei~~~ 645 (974)
T KOG4257|consen 609 ERL-------------------------------------------PCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAI 645 (974)
T ss_pred CCC-------------------------------------------CCCCCCChHHHHHHHHHhccCcccCCcHHHHHHH
Confidence 221 2567899999999999999999999999999999
Q ss_pred HHHHHHHH
Q 005045 702 LKTIRNCF 709 (717)
Q Consensus 702 l~~i~~~~ 709 (717)
|+.+.++.
T Consensus 646 lsdv~qee 653 (974)
T KOG4257|consen 646 LSDVLQEE 653 (974)
T ss_pred HHHHHHHh
Confidence 99999754
No 58
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6e-37 Score=319.52 Aligned_cols=205 Identities=26% Similarity=0.395 Sum_probs=178.2
Q ss_pred ccccccccccccccCcccccceEEEEeC-CCchhhhHHhHhhh---hhHHHHHHHHHHHHhcC-CCCceeEEEEeecccc
Q 005045 384 ISKSTDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQ---QGALKSFIDECNALKST-RHRNILRVITACSSVD 458 (717)
Q Consensus 384 ~~~~~~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~~ 458 (717)
.....++|+.++.+|+|.||+|++|..+ +++.+|||++++.. ....+..+.|.+|+... +||.++.++.+
T Consensus 363 ~~~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~----- 437 (694)
T KOG0694|consen 363 GPLTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSC----- 437 (694)
T ss_pred CcccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccc-----
Confidence 3455779999999999999999999976 78899999998653 45567788888888877 69999999998
Q ss_pred CCCCceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCc
Q 005045 459 LEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMT 538 (717)
Q Consensus 459 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~ 538 (717)
++..+++|+||||+.||++..+.+. +.+++..++.+|..|+.||.|||++ ||++||||-+||++|.+|.
T Consensus 438 fQT~~~l~fvmey~~Ggdm~~~~~~--------~~F~e~rarfyaAev~l~L~fLH~~---~IIYRDlKLdNiLLD~eGh 506 (694)
T KOG0694|consen 438 FQTKEHLFFVMEYVAGGDLMHHIHT--------DVFSEPRARFYAAEVVLGLQFLHEN---GIIYRDLKLDNLLLDTEGH 506 (694)
T ss_pred cccCCeEEEEEEecCCCcEEEEEec--------ccccHHHHHHHHHHHHHHHHHHHhc---CceeeecchhheEEcccCc
Confidence 7778899999999999996555543 5799999999999999999999998 9999999999999999999
Q ss_pred eEEeeeccchhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHhCCCCCCCCCC
Q 005045 539 AHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRPTGDMFK 611 (717)
Q Consensus 539 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~ 611 (717)
+||+|||+++.. ........++.||+.|+|||++.+ .|+.++|+|||||+||||+.|+.||.+.++
T Consensus 507 ~kiADFGlcKe~-------m~~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddE 573 (694)
T KOG0694|consen 507 VKIADFGLCKEG-------MGQGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDE 573 (694)
T ss_pred EEeccccccccc-------CCCCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCH
Confidence 999999999854 222234567899999999999766 599999999999999999999999987543
No 59
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=2.4e-37 Score=322.83 Aligned_cols=287 Identities=26% Similarity=0.312 Sum_probs=207.4
Q ss_pred ccccccccCcccccceEEEEe-CCCchhhhHHhHhhhhhHHHHHHHHHHHHhcCC-C-----CceeEEEEeeccccCCCC
Q 005045 390 NFSKENLIGTGSFGSVYKGTL-GDGTIVAIKVLKLQQQGALKSFIDECNALKSTR-H-----RNILRVITACSSVDLEGN 462 (717)
Q Consensus 390 ~y~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h-----~ni~~~~~~~~~~~~~~~ 462 (717)
+|.+.+.||+|.||.|-+|.+ ++++.||||+++.... ...+...|+.+|..++ | -|+|+++++ +...
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~-f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~-----F~fr 260 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKR-FLRQAQIEIRILELLNKHDPDDKYNIVRMLDY-----FYFR 260 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccChH-HHHHHHHHHHHHHHHhccCCCCCeeEEEeeec-----cccc
Confidence 999999999999999999995 5899999999986643 3466678999999996 3 379999999 5556
Q ss_pred ceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCC--CceE
Q 005045 463 DFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKD--MTAH 540 (717)
Q Consensus 463 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~--~~~k 540 (717)
++.|||+|.+ +.+|+++++.+ .+..++...++.++.||+.||..||+. +|||+||||+|||+-.. ..+|
T Consensus 261 ~HlciVfELL-~~NLYellK~n-----~f~Glsl~~ir~~~~Qil~~L~~L~~l---~IIHcDLKPENILL~~~~r~~vK 331 (586)
T KOG0667|consen 261 NHLCIVFELL-STNLYELLKNN-----KFRGLSLPLVRKFAQQILTALLFLHEL---GIIHCDLKPENILLKDPKRSRIK 331 (586)
T ss_pred cceeeeehhh-hhhHHHHHHhc-----CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCChhheeeccCCcCcee
Confidence 6999999999 67999999977 347799999999999999999999998 99999999999999743 3899
Q ss_pred EeeeccchhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhh-H
Q 005045 541 VGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIH-M 618 (717)
Q Consensus 541 l~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~-~ 618 (717)
|+|||.|++.. ... ..++.+..|+|||++-| +|+.+.||||||||++||++|.+.|.+..+-+.-.. .
T Consensus 332 VIDFGSSc~~~---------q~v-ytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~ 401 (586)
T KOG0667|consen 332 VIDFGSSCFES---------QRV-YTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARII 401 (586)
T ss_pred EEecccccccC---------Ccc-eeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHH
Confidence 99999999751 112 25778889999999655 799999999999999999999988877654333111 1
Q ss_pred HHHhcCChhhhhhcCCCCCCCCC------------Cc----HHHHHHHHHHHHHH-hhh-hhhhcchhhhHHHHHHHHHH
Q 005045 619 FVSMALPDHVMDILDPSMPLDEE------------ND----EEQIEEVIEEKEMM-IHI-DLEVNTKNKLEECFVSVLRI 680 (717)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~~~~~~------------~~----~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~l~~l 680 (717)
.+....|.++.+...+.-..... .. ...+.......... ..+ +...............+.++
T Consensus 402 e~lG~Pp~~mL~~~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~df 481 (586)
T KOG0667|consen 402 EVLGLPPPKMLDTAKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDF 481 (586)
T ss_pred HHhCCCCHHHHHhccccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHH
Confidence 11122333333333222111110 00 00011111111111 011 11111111222446678999
Q ss_pred hhccCCCCcCCCCCHHHHHHH
Q 005045 681 GLMCSTTSPRERIAMNVVVNN 701 (717)
Q Consensus 681 i~~cl~~~p~~Rps~~eil~~ 701 (717)
+++|+.|||.+|+|..|+++.
T Consensus 482 lk~~L~~dP~~R~tp~qal~H 502 (586)
T KOG0667|consen 482 LKRCLEWDPAERITPAQALNH 502 (586)
T ss_pred HHHHhccCchhcCCHHHHhcC
Confidence 999999999999999998853
No 60
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=8.1e-37 Score=321.06 Aligned_cols=252 Identities=22% Similarity=0.313 Sum_probs=198.2
Q ss_pred cccccccccCcccccceEEEEeC-CCchhhhHHhHhhh---hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCce
Q 005045 389 DNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQ---QGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDF 464 (717)
Q Consensus 389 ~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 464 (717)
++|++.+.||+|++|.||+|.+. +++.||+|++.... ......+..|+++++.++||||+++++.+ ...+.
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~-----~~~~~ 75 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAF-----QDDEY 75 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEE-----EcCCE
Confidence 47999999999999999999965 68899999987542 23456788899999999999999999884 44568
Q ss_pred EEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeee
Q 005045 465 KALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDF 544 (717)
Q Consensus 465 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Df 544 (717)
.|+||||+++++|.+++... ..+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 76 ~~lv~e~~~g~~L~~~l~~~-------~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kL~Df 145 (333)
T cd05600 76 LYLAMEYVPGGDFRTLLNNL-------GVLSEDHARFYMAEMFEAVDALHEL---GYIHRDLKPENFLIDASGHIKLTDF 145 (333)
T ss_pred EEEEEeCCCCCCHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEEEeC
Confidence 99999999999999999754 5688999999999999999999998 9999999999999999999999999
Q ss_pred ccchhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHHHhc
Q 005045 545 GLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVSMA 623 (717)
Q Consensus 545 g~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~ 623 (717)
|.+..... ......|++.|+|||++.+ .++.++|||||||++|||++|..||......+. ......
T Consensus 146 g~a~~~~~----------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~--~~~i~~- 212 (333)
T cd05600 146 GLSKGIVT----------YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNET--WENLKY- 212 (333)
T ss_pred cCCccccc----------ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHH--HHHHHh-
Confidence 99876421 2233568999999999765 589999999999999999999999975432211 000000
Q ss_pred CChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHHH
Q 005045 624 LPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVNN 701 (717)
Q Consensus 624 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~~ 701 (717)
....+....... .....+..+.+++.+|++.+|++|||++|+++.
T Consensus 213 ----~~~~~~~~~~~~-----------------------------~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h 257 (333)
T cd05600 213 ----WKETLQRPVYDD-----------------------------PRFNLSDEAWDLITKLINDPSRRFGSLEDIKNH 257 (333)
T ss_pred ----ccccccCCCCCc-----------------------------cccccCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence 000000000000 001124567889999999999999999999965
No 61
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=2.3e-36 Score=317.16 Aligned_cols=270 Identities=21% Similarity=0.358 Sum_probs=202.9
Q ss_pred ccccccccccccccCcccccceEEEEeC------CCchhhhHHhHhhh-hhHHHHHHHHHHHHhcC-CCCceeEEEEeec
Q 005045 384 ISKSTDNFSKENLIGTGSFGSVYKGTLG------DGTIVAIKVLKLQQ-QGALKSFIDECNALKST-RHRNILRVITACS 455 (717)
Q Consensus 384 ~~~~~~~y~~~~~ig~g~~g~v~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~ 455 (717)
|..+.++|++.+.||+|+||.||.|... +++.||+|++.... ....+.+..|+.+++++ +|+||+++++++.
T Consensus 2 ~~~~~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~ 81 (337)
T cd05054 2 WEFPRDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACT 81 (337)
T ss_pred cccCHHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEe
Confidence 3456779999999999999999999632 35789999886432 23345677899999999 8999999999873
Q ss_pred cccCCCCceEEEEEecCCCCChhhhccCCCCCc-----------------------------------------------
Q 005045 456 SVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEH----------------------------------------------- 488 (717)
Q Consensus 456 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~----------------------------------------------- 488 (717)
..+...+++|||+++++|.+++.......
T Consensus 82 ----~~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (337)
T cd05054 82 ----KPGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVE 157 (337)
T ss_pred ----cCCCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcc
Confidence 34457899999999999999885421100
Q ss_pred -------ccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeeccchhcccccCCCCCCc
Q 005045 489 -------YQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQ 561 (717)
Q Consensus 489 -------~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 561 (717)
.....+++..+.+++.||+.|++|||+. +|+||||||+||+++.++.++|+|||++..+.... ..
T Consensus 158 ~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~-----~~ 229 (337)
T cd05054 158 EDEEGDELYKEPLTLEDLISYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDP-----DY 229 (337)
T ss_pred cchhhhHHhhcCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEeCCCcEEEeccccchhcccCc-----ch
Confidence 0013678999999999999999999997 99999999999999999999999999998652111 11
Q ss_pred ceeecccccccccCCCccC-CCCCcccchhhHHHHHHHHHh-CCCCCCCCCCCchhhhHHHHhcCChhhhhhcCCCCCCC
Q 005045 562 TVSIGLKGSIGYIPPEHMN-GQVSILGDIYSYGILLLEMFT-GKRPTGDMFKDDFSIHMFVSMALPDHVMDILDPSMPLD 639 (717)
Q Consensus 562 ~~~~~~~~~~~y~aPE~~~-~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 639 (717)
.......++..|+|||++. +.++.++|||||||++|+|++ |..||......+. ...... ......
T Consensus 230 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~-~~~~~~------------~~~~~~ 296 (337)
T cd05054 230 VRKGDARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEE-FCRRLK------------EGTRMR 296 (337)
T ss_pred hhccCCCCCccccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHH-HHHHHh------------ccCCCC
Confidence 1112234567899999854 458999999999999999998 9999965422211 110000 000000
Q ss_pred CCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHHHHHHHHH
Q 005045 640 EENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVNNLKTIRN 707 (717)
Q Consensus 640 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~~l~~i~~ 707 (717)
.+..++..+.+++.+||+.+|++||++.||++.|+++.+
T Consensus 297 -----------------------------~~~~~~~~~~~l~~~cl~~~p~~RPs~~ell~~l~~~~~ 335 (337)
T cd05054 297 -----------------------------APEYATPEIYSIMLDCWHNNPEDRPTFSELVEILGDLLQ 335 (337)
T ss_pred -----------------------------CCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 011124567899999999999999999999999998865
No 62
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-37 Score=282.27 Aligned_cols=251 Identities=24% Similarity=0.352 Sum_probs=196.5
Q ss_pred cccccccccccCcccccceEEEEe-CCCchhhhHHhHhh--hhhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCc
Q 005045 387 STDNFSKENLIGTGSFGSVYKGTL-GDGTIVAIKVLKLQ--QQGALKSFIDECNALKSTRHRNILRVITACSSVDLEGND 463 (717)
Q Consensus 387 ~~~~y~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~ 463 (717)
-.+.|++-+.||+|+|+.|+++.. .+|+.+|+|++... .....+.+.+|++|.+.++||||+++.+. +....
T Consensus 9 f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~t-----i~~~~ 83 (355)
T KOG0033|consen 9 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS-----IQEES 83 (355)
T ss_pred cchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhh-----hcccc
Confidence 356899999999999999999985 48999999999754 23345788899999999999999999988 55666
Q ss_pred eEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCC---CCceE
Q 005045 464 FKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDK---DMTAH 540 (717)
Q Consensus 464 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~---~~~~k 540 (717)
..|+|||++.|+.|-.=+-.+ ..+++..+...++||++|++|+|.+ +|||||+||+|+++.. ..-+|
T Consensus 84 ~~ylvFe~m~G~dl~~eIV~R-------~~ySEa~aSH~~rQiLeal~yCH~n---~IvHRDvkP~nllLASK~~~A~vK 153 (355)
T KOG0033|consen 84 FHYLVFDLVTGGELFEDIVAR-------EFYSEADASHCIQQILEALAYCHSN---GIVHRDLKPENLLLASKAKGAAVK 153 (355)
T ss_pred eeEEEEecccchHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeeeeccCCCcee
Confidence 899999999999886433322 4578899999999999999999998 9999999999999963 34799
Q ss_pred EeeeccchhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHH
Q 005045 541 VGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMF 619 (717)
Q Consensus 541 l~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~ 619 (717)
|+|||+|..+. ......+..||+.|+|||++.. +|+..+||||.||++|-|+.|..||.+..... +.+.
T Consensus 154 L~~FGvAi~l~--------~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~r--lye~ 223 (355)
T KOG0033|consen 154 LADFGLAIEVN--------DGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHR--LYEQ 223 (355)
T ss_pred ecccceEEEeC--------CccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHH--HHHH
Confidence 99999998762 2334567889999999999765 58999999999999999999999996532221 1111
Q ss_pred HHhcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHH
Q 005045 620 VSMALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVV 699 (717)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil 699 (717)
+.......++ +++. ...+...+++.+|+..||.+|.|+.|.+
T Consensus 224 -----------I~~g~yd~~~---------------------~~w~------~is~~Ak~LvrrML~~dP~kRIta~EAL 265 (355)
T KOG0033|consen 224 -----------IKAGAYDYPS---------------------PEWD------TVTPEAKSLIRRMLTVNPKKRITADEAL 265 (355)
T ss_pred -----------HhccccCCCC---------------------cccC------cCCHHHHHHHHHHhccChhhhccHHHHh
Confidence 1111111110 0000 1133456899999999999999999987
Q ss_pred H
Q 005045 700 N 700 (717)
Q Consensus 700 ~ 700 (717)
.
T Consensus 266 ~ 266 (355)
T KOG0033|consen 266 K 266 (355)
T ss_pred C
Confidence 4
No 63
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=2.2e-36 Score=321.94 Aligned_cols=266 Identities=24% Similarity=0.344 Sum_probs=199.1
Q ss_pred cccccccccccccCcccccceEEEEe------CCCchhhhHHhHhhh-hhHHHHHHHHHHHHhcC-CCCceeEEEEeecc
Q 005045 385 SKSTDNFSKENLIGTGSFGSVYKGTL------GDGTIVAIKVLKLQQ-QGALKSFIDECNALKST-RHRNILRVITACSS 456 (717)
Q Consensus 385 ~~~~~~y~~~~~ig~g~~g~v~~~~~------~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~ 456 (717)
....++|++.++||+|+||.||+|.+ .++..||+|+++... ....+.+.+|+++++.+ +||||+++++.+
T Consensus 31 ~~~~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~-- 108 (375)
T cd05104 31 EFPRNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGAC-- 108 (375)
T ss_pred ccchHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeee--
Confidence 34466899999999999999999963 246679999986432 33456788999999999 899999999985
Q ss_pred ccCCCCceEEEEEecCCCCChhhhccCCCCCc------------------------------------------------
Q 005045 457 VDLEGNDFKALVFEFMSNGNLDQWLHPSPAEH------------------------------------------------ 488 (717)
Q Consensus 457 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~------------------------------------------------ 488 (717)
...+..++||||+++|+|.+++.......
T Consensus 109 ---~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 185 (375)
T cd05104 109 ---TVGGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADK 185 (375)
T ss_pred ---ccCCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCccccccccccc
Confidence 34457899999999999999886432100
Q ss_pred --------------------ccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeeccch
Q 005045 489 --------------------YQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAK 548 (717)
Q Consensus 489 --------------------~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~ 548 (717)
.....+++..+.+++.||+.||+|||+. +++||||||+||+++.++.+||+|||.+.
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~DfG~a~ 262 (375)
T cd05104 186 RRSVRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASK---NCIHRDLAARNILLTHGRITKICDFGLAR 262 (375)
T ss_pred ccccccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCchhhEEEECCCcEEEecCccce
Confidence 0012478889999999999999999997 99999999999999999999999999987
Q ss_pred hcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHh-CCCCCCCCCCCchhhhHHHHhcCCh
Q 005045 549 FLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFT-GKRPTGDMFKDDFSIHMFVSMALPD 626 (717)
Q Consensus 549 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 626 (717)
...... .........++..|+|||++.+ .++.++|||||||++|+|++ |..||........ .....
T Consensus 263 ~~~~~~-----~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~-~~~~~------ 330 (375)
T cd05104 263 DIRNDS-----NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSK-FYKMI------ 330 (375)
T ss_pred eccCcc-----cccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHH-HHHHH------
Confidence 652111 1111122335667999999654 58999999999999999998 8889865432211 11111
Q ss_pred hhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHHHHHHH
Q 005045 627 HVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVNNLKTI 705 (717)
Q Consensus 627 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~~l~~i 705 (717)
....... .+...+.++.+++.+||+.+|++|||++||++.|++.
T Consensus 331 ------~~~~~~~-----------------------------~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~~ 374 (375)
T cd05104 331 ------KEGYRML-----------------------------SPECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQQ 374 (375)
T ss_pred ------HhCccCC-----------------------------CCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHhh
Confidence 1000000 0011145678999999999999999999999999863
No 64
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=1.2e-36 Score=313.11 Aligned_cols=273 Identities=22% Similarity=0.284 Sum_probs=197.1
Q ss_pred cccccccccCcccccceEEEEeC-CCchhhhHHhHhhh--hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceE
Q 005045 389 DNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQ--QGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFK 465 (717)
Q Consensus 389 ~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~ 465 (717)
++|++.+.||+|++|.||+|+++ +++.||+|++.... ....+.+.+|+++++.++||||+++++++ ...+..
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~~~~ 75 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAF-----RRRGKL 75 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhE-----ecCCEE
Confidence 47999999999999999999975 78889999886432 23356778899999999999999999884 445689
Q ss_pred EEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeec
Q 005045 466 ALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFG 545 (717)
Q Consensus 466 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg 545 (717)
++||||++++.+..+.... ..+++..++.++.|++.||+|||+. +++||||||+||+++.++.+||+|||
T Consensus 76 ~lv~e~~~~~~l~~~~~~~-------~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nill~~~~~~kl~Dfg 145 (287)
T cd07848 76 YLVFEYVEKNMLELLEEMP-------NGVPPEKVRSYIYQLIKAIHWCHKN---DIVHRDIKPENLLISHNDVLKLCDFG 145 (287)
T ss_pred EEEEecCCCCHHHHHHhcC-------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeecc
Confidence 9999999887766554322 4688999999999999999999997 99999999999999999999999999
Q ss_pred cchhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhh-HHHHhc
Q 005045 546 LAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIH-MFVSMA 623 (717)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~-~~~~~~ 623 (717)
.+....... ........|+..|+|||++.+ .++.++|||||||++|+|++|+.||......+.... ......
T Consensus 146 ~~~~~~~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~ 219 (287)
T cd07848 146 FARNLSEGS------NANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGP 219 (287)
T ss_pred Ccccccccc------cccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCC
Confidence 987652111 111223458899999999654 589999999999999999999999976432211110 011111
Q ss_pred CChhhhhhc--CCCCC---CCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHH
Q 005045 624 LPDHVMDIL--DPSMP---LDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVV 698 (717)
Q Consensus 624 ~~~~~~~~~--~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ei 698 (717)
++....... ++... .......... ........+..+.+++.+||+.+|++|||++|+
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~ 281 (287)
T cd07848 220 LPAEQMKLFYSNPRFHGLRFPAVNHPQSL------------------ERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQC 281 (287)
T ss_pred CCHHHHHhhhccchhcccccCcccCcccH------------------HHhhhcccCHHHHHHHHHHccCCcccCCCHHHH
Confidence 111111100 00000 0000000000 000112235678999999999999999999998
Q ss_pred HH
Q 005045 699 VN 700 (717)
Q Consensus 699 l~ 700 (717)
++
T Consensus 282 l~ 283 (287)
T cd07848 282 LN 283 (287)
T ss_pred hc
Confidence 85
No 65
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=1.3e-36 Score=308.44 Aligned_cols=257 Identities=26% Similarity=0.466 Sum_probs=201.1
Q ss_pred cccccccccccccCcccccceEEEEeCCCchhhhHHhHhhhhhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCce
Q 005045 385 SKSTDNFSKENLIGTGSFGSVYKGTLGDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDF 464 (717)
Q Consensus 385 ~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 464 (717)
....++|++.++||+|++|.||+|...+++.||+|.+..... ..+.+.+|+.+++.++|+||+++++.+ ...+.
T Consensus 2 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~ 75 (261)
T cd05072 2 EIPRESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTM-SVQAFLEEANLMKTLQHDKLVRLYAVV-----TKEEP 75 (261)
T ss_pred cCchHHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCch-hHHHHHHHHHHHHhCCCCCeeeEEEEE-----cCCCC
Confidence 345678999999999999999999987788899998764432 346788999999999999999999884 34557
Q ss_pred EEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeee
Q 005045 465 KALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDF 544 (717)
Q Consensus 465 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Df 544 (717)
.+++|||+++++|.+++..... ..+++..++.++.|++.|++|||+. +++||||+|+||+++.++.++|+||
T Consensus 76 ~~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~df 147 (261)
T cd05072 76 IYIITEYMAKGSLLDFLKSDEG-----GKVLLPKLIDFSAQIAEGMAYIERK---NYIHRDLRAANVLVSESLMCKIADF 147 (261)
T ss_pred cEEEEecCCCCcHHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEecCCCcEEECCC
Confidence 8999999999999999865421 5678889999999999999999997 9999999999999999999999999
Q ss_pred ccchhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHh-CCCCCCCCCCCchhhhHHHHh
Q 005045 545 GLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFT-GKRPTGDMFKDDFSIHMFVSM 622 (717)
Q Consensus 545 g~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~ 622 (717)
|.+....... ........++..|+|||.+.+ .++.++|||||||++|+|++ |..||....... .......
T Consensus 148 g~~~~~~~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~--~~~~~~~ 219 (261)
T cd05072 148 GLARVIEDNE------YTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSD--VMSALQR 219 (261)
T ss_pred ccceecCCCc------eeccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHH--HHHHHHc
Confidence 9997652111 011122335678999999654 57899999999999999998 999986532211 1111100
Q ss_pred cCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHHHH
Q 005045 623 ALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVNNL 702 (717)
Q Consensus 623 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~~l 702 (717)
. ... + ....++..+.+++.+|+..+|++|||++++.+.|
T Consensus 220 ~--------~~~--~-------------------------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l 258 (261)
T cd05072 220 G--------YRM--P-------------------------------RMENCPDELYDIMKTCWKEKAEERPTFDYLQSVL 258 (261)
T ss_pred C--------CCC--C-------------------------------CCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHH
Confidence 0 000 0 0111245678899999999999999999999999
Q ss_pred HH
Q 005045 703 KT 704 (717)
Q Consensus 703 ~~ 704 (717)
++
T Consensus 259 ~~ 260 (261)
T cd05072 259 DD 260 (261)
T ss_pred hc
Confidence 85
No 66
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=1.6e-36 Score=312.71 Aligned_cols=275 Identities=24% Similarity=0.367 Sum_probs=194.6
Q ss_pred cccccccccCcccccceEEEEeC--CCchhhhHHhHhhh--hhHHHHHHHHHHHHhcC---CCCceeEEEEeeccccCCC
Q 005045 389 DNFSKENLIGTGSFGSVYKGTLG--DGTIVAIKVLKLQQ--QGALKSFIDECNALKST---RHRNILRVITACSSVDLEG 461 (717)
Q Consensus 389 ~~y~~~~~ig~g~~g~v~~~~~~--~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l---~h~ni~~~~~~~~~~~~~~ 461 (717)
++|++.+.||+|+||.||+|++. +++.||+|.+.... ......+.+|+.+++.+ .||||+++++++.......
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~ 80 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 80 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence 47999999999999999999863 46889999876432 22234455677766655 7999999999875443445
Q ss_pred CceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEE
Q 005045 462 NDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHV 541 (717)
Q Consensus 462 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl 541 (717)
....++||||++ ++|.+++..... ..+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||
T Consensus 81 ~~~~~lv~e~~~-~~l~~~~~~~~~-----~~~~~~~~~~i~~qi~~aL~~lH~~---~iiH~dlkp~Nil~~~~~~~kl 151 (290)
T cd07862 81 ETKLTLVFEHVD-QDLTTYLDKVPE-----PGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKL 151 (290)
T ss_pred CCcEEEEEccCC-CCHHHHHHhCCC-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEcCCCCEEE
Confidence 567899999996 689998865421 4589999999999999999999997 9999999999999999999999
Q ss_pred eeeccchhcccccCCCCCCcceeecccccccccCCCccC-CCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHH
Q 005045 542 GDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMN-GQVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFV 620 (717)
Q Consensus 542 ~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~ 620 (717)
+|||.+...... .......|+..|+|||++. +.++.++|||||||++|||++|..||......+. .....
T Consensus 152 ~Dfg~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~-~~~i~ 222 (290)
T cd07862 152 ADFGLARIYSFQ--------MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQ-LGKIL 222 (290)
T ss_pred ccccceEeccCC--------cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHH-HHHHH
Confidence 999998754111 1223355899999999964 4589999999999999999999999976533221 11111
Q ss_pred H-hcCC--hhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHH
Q 005045 621 S-MALP--DHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNV 697 (717)
Q Consensus 621 ~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~e 697 (717)
. ...+ ..+..... +... . .............++.+..+.+++.+|++.+|++|||+.|
T Consensus 223 ~~~~~~~~~~~~~~~~--~~~~----------~-------~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~ 283 (290)
T cd07862 223 DVIGLPGEEDWPRDVA--LPRQ----------A-------FHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYS 283 (290)
T ss_pred HHhCCCChhhchhhhc--ccch----------h-------ccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHH
Confidence 0 0011 00100000 0000 0 0000000000011223556789999999999999999999
Q ss_pred HHH
Q 005045 698 VVN 700 (717)
Q Consensus 698 il~ 700 (717)
+++
T Consensus 284 ~l~ 286 (290)
T cd07862 284 ALS 286 (290)
T ss_pred Hhc
Confidence 985
No 67
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=2.7e-36 Score=316.46 Aligned_cols=199 Identities=29% Similarity=0.462 Sum_probs=170.1
Q ss_pred ccccccccccCcccccceEEEEeC-CCchhhhHHhHhh-hhhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceE
Q 005045 388 TDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQ-QQGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFK 465 (717)
Q Consensus 388 ~~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~ 465 (717)
.++|++.++||+|+||.||+|.++ +++.+|+|.+... .......+.+|++++++++|+||+++++++. ..+..
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~~~~ 78 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFY-----SDGEI 78 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEE-----ECCEE
Confidence 578999999999999999999966 7888999987654 2334567889999999999999999999954 34589
Q ss_pred EEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeec
Q 005045 466 ALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFG 545 (717)
Q Consensus 466 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg 545 (717)
++||||+++++|.+++... ..+++..+..++.|++.|++|||+. .+++||||||+||+++.++.+||+|||
T Consensus 79 ~lv~e~~~~~~L~~~l~~~-------~~~~~~~~~~~~~~l~~~l~~lH~~--~~ivH~dlkp~Nili~~~~~~kL~Dfg 149 (333)
T cd06650 79 SICMEHMDGGSLDQVLKKA-------GRIPEQILGKVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFG 149 (333)
T ss_pred EEEEecCCCCcHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHhc--CCEEecCCChhhEEEcCCCCEEEeeCC
Confidence 9999999999999999754 4578899999999999999999974 279999999999999999999999999
Q ss_pred cchhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHhCCCCCCCC
Q 005045 546 LAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRPTGDM 609 (717)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~ 609 (717)
++...... ......|+..|+|||++.+ .++.++|||||||++|+|++|..||...
T Consensus 150 ~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~ 205 (333)
T cd06650 150 VSGQLIDS---------MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPP 205 (333)
T ss_pred cchhhhhh---------ccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc
Confidence 98754211 1123458899999999765 4789999999999999999999999754
No 68
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-36 Score=316.77 Aligned_cols=268 Identities=25% Similarity=0.423 Sum_probs=208.5
Q ss_pred CcccccccccccccccccCcccccceEEEEeC--CC---chhhhHHhHh---hhhhHHHHHHHHHHHHhcCCCCceeEEE
Q 005045 380 SYSDISKSTDNFSKENLIGTGSFGSVYKGTLG--DG---TIVAIKVLKL---QQQGALKSFIDECNALKSTRHRNILRVI 451 (717)
Q Consensus 380 s~~~~~~~~~~y~~~~~ig~g~~g~v~~~~~~--~~---~~vavK~~~~---~~~~~~~~~~~e~~~l~~l~h~ni~~~~ 451 (717)
.-+.|.-...+-...+++|+|+||.||.|..+ ++ ..||+|.... ........+.+|++++++++||||+++|
T Consensus 148 ~r~~Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~y 227 (474)
T KOG0194|consen 148 PRQKWELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFY 227 (474)
T ss_pred cccccEEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEE
Confidence 33444455555666699999999999999954 22 2289999885 2356788999999999999999999999
Q ss_pred EeeccccCCCCceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCE
Q 005045 452 TACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNV 531 (717)
Q Consensus 452 ~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NI 531 (717)
|++...+ .+++|||+|+||+|.+++++.. ..++..+...++.+.|.||+|||+. +++||||.++|+
T Consensus 228 GVa~~~~-----Pl~ivmEl~~gGsL~~~L~k~~------~~v~~~ek~~~~~~AA~Gl~YLh~k---~~IHRDIAARNc 293 (474)
T KOG0194|consen 228 GVAVLEE-----PLMLVMELCNGGSLDDYLKKNK------KSLPTLEKLRFCYDAARGLEYLHSK---NCIHRDIAARNC 293 (474)
T ss_pred EEEcCCC-----ccEEEEEecCCCcHHHHHHhCC------CCCCHHHHHHHHHHHHhHHHHHHHC---CCcchhHhHHHh
Confidence 9965543 8999999999999999999764 3699999999999999999999997 999999999999
Q ss_pred EeCCCCceEEeeeccchhcccccCCCCCCcceeecccccccccCCCccC-CCCCcccchhhHHHHHHHHHh-CCCCCCCC
Q 005045 532 LLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMN-GQVSILGDIYSYGILLLEMFT-GKRPTGDM 609 (717)
Q Consensus 532 ll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~sDvwslG~vl~ellt-g~~p~~~~ 609 (717)
+++.++.+||+|||+++...... .......-+..|+|||.+. +.+++++|||||||++||+++ |..||.+.
T Consensus 294 L~~~~~~vKISDFGLs~~~~~~~-------~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~ 366 (474)
T KOG0194|consen 294 LYSKKGVVKISDFGLSRAGSQYV-------MKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGM 366 (474)
T ss_pred eecCCCeEEeCccccccCCccee-------eccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCC
Confidence 99999999999999988642110 0000113567899999965 458999999999999999999 89999775
Q ss_pred CCCchhhhHHHHhcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCc
Q 005045 610 FKDDFSIHMFVSMALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSP 689 (717)
Q Consensus 610 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p 689 (717)
... .....+ ........ .+...+..+..++.+||..+|
T Consensus 367 ~~~--~v~~kI-----------~~~~~r~~-----------------------------~~~~~p~~~~~~~~~c~~~~p 404 (474)
T KOG0194|consen 367 KNY--EVKAKI-----------VKNGYRMP-----------------------------IPSKTPKELAKVMKQCWKKDP 404 (474)
T ss_pred CHH--HHHHHH-----------HhcCccCC-----------------------------CCCCCHHHHHHHHHHhccCCh
Confidence 322 111111 00000000 111226778889999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHH
Q 005045 690 RERIAMNVVVNNLKTIRNCFL 710 (717)
Q Consensus 690 ~~Rps~~eil~~l~~i~~~~~ 710 (717)
++||||.++.+.++.+.....
T Consensus 405 ~~R~tm~~i~~~l~~~~~~~~ 425 (474)
T KOG0194|consen 405 EDRPTMSTIKKKLEALEKKKE 425 (474)
T ss_pred hhccCHHHHHHHHHHHHhccc
Confidence 999999999999999886543
No 69
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=3e-36 Score=309.71 Aligned_cols=276 Identities=24% Similarity=0.382 Sum_probs=201.8
Q ss_pred ccccccccccCcccccceEEEEe-----CCCchhhhHHhHhhhhhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCC
Q 005045 388 TDNFSKENLIGTGSFGSVYKGTL-----GDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRVITACSSVDLEGN 462 (717)
Q Consensus 388 ~~~y~~~~~ig~g~~g~v~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~ 462 (717)
..+|++.+.||+|+||.||.|.. .+++.||+|.+........+.+.+|+++++.++||||+++++++.. .+.
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~---~~~ 79 (284)
T cd05081 3 ERHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYS---AGR 79 (284)
T ss_pred cccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEcc---CCC
Confidence 35789999999999999999973 2678899999876655556788999999999999999999987643 234
Q ss_pred ceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEe
Q 005045 463 DFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVG 542 (717)
Q Consensus 463 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~ 542 (717)
...++||||+++++|.+++.... ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+
T Consensus 80 ~~~~lv~e~~~~~~L~~~l~~~~------~~l~~~~~~~~~~~l~~aL~~LH~~---~i~H~dlkp~nili~~~~~~~l~ 150 (284)
T cd05081 80 RNLRLVMEYLPYGSLRDYLQKHR------ERLDHRKLLLYASQICKGMEYLGSK---RYVHRDLATRNILVESENRVKIG 150 (284)
T ss_pred CceEEEEEecCCCCHHHHHHhcC------cCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHhhEEECCCCeEEEC
Confidence 56899999999999999986542 4589999999999999999999998 99999999999999999999999
Q ss_pred eeccchhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHHH
Q 005045 543 DFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVS 621 (717)
Q Consensus 543 Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~ 621 (717)
|||.+....... ..........++..|+|||...+ .++.++|||||||++|||++|..|+...... ....
T Consensus 151 dfg~~~~~~~~~----~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~---~~~~-- 221 (284)
T cd05081 151 DFGLTKVLPQDK----EYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAE---FMRM-- 221 (284)
T ss_pred CCcccccccCCC----cceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchh---hhhh--
Confidence 999998652111 10111111224456999999654 5889999999999999999988776432110 0000
Q ss_pred hcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHHH
Q 005045 622 MALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVNN 701 (717)
Q Consensus 622 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~~ 701 (717)
........ .......+.+... ........++..+.+++.+||+.+|++||||+||++.
T Consensus 222 ----------~~~~~~~~--~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~ 279 (284)
T cd05081 222 ----------MGNDKQGQ--MIVYHLIELLKNN----------GRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQ 279 (284)
T ss_pred ----------cccccccc--cchHHHHHHHhcC----------CcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHH
Confidence 00000000 0000000011000 0001123346678999999999999999999999999
Q ss_pred HHHHH
Q 005045 702 LKTIR 706 (717)
Q Consensus 702 l~~i~ 706 (717)
|+.++
T Consensus 280 l~~~~ 284 (284)
T cd05081 280 VEAIR 284 (284)
T ss_pred HHhcC
Confidence 98763
No 70
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=2.9e-36 Score=315.05 Aligned_cols=240 Identities=23% Similarity=0.332 Sum_probs=188.9
Q ss_pred cccCcccccceEEEEeC-CCchhhhHHhHhhh---hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceEEEEEe
Q 005045 395 NLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQ---QGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFKALVFE 470 (717)
Q Consensus 395 ~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~lv~e 470 (717)
+.||+|+||.||+++.+ +|+.||+|++.... ......+.+|+++++.++||||+++++.+ ...+..|+|||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~-----~~~~~~~lv~E 75 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAF-----QTHDRLCFVME 75 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEE-----ecCCEEEEEEe
Confidence 46899999999999964 78999999986542 23446677899999999999999999884 44568999999
Q ss_pred cCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeeccchhc
Q 005045 471 FMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFL 550 (717)
Q Consensus 471 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~ 550 (717)
|+++++|.+++... ..+++..++.++.||+.||+|||+. +|+||||||+||+++.++.+||+|||.+...
T Consensus 76 ~~~~~~L~~~l~~~-------~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~ 145 (323)
T cd05595 76 YANGGELFFHLSRE-------RVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEG 145 (323)
T ss_pred CCCCCcHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEEcCCCCEEecccHHhccc
Confidence 99999999888654 4689999999999999999999997 9999999999999999999999999988743
Q ss_pred ccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHHHhcCChhhh
Q 005045 551 FEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVSMALPDHVM 629 (717)
Q Consensus 551 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 629 (717)
.. .........|++.|+|||++.+ .++.++|||||||++|+|++|..||........ . .
T Consensus 146 ~~-------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~-~------------~ 205 (323)
T cd05595 146 IS-------DGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERL-F------------E 205 (323)
T ss_pred cC-------CCCccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHH-H------------H
Confidence 11 1111223568999999999754 589999999999999999999999965422110 0 0
Q ss_pred hhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCC-----CHHHHHH
Q 005045 630 DILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERI-----AMNVVVN 700 (717)
Q Consensus 630 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp-----s~~eil~ 700 (717)
.+...... .+..++..+.+++.+||+.+|++|| ++.++++
T Consensus 206 ~~~~~~~~-------------------------------~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~ 250 (323)
T cd05595 206 LILMEEIR-------------------------------FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 250 (323)
T ss_pred HHhcCCCC-------------------------------CCCCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHc
Confidence 00000000 0111245678899999999999998 8888875
No 71
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=3.3e-36 Score=306.49 Aligned_cols=260 Identities=25% Similarity=0.370 Sum_probs=201.5
Q ss_pred cccccccccCcccccceEEEEeC-CCchhhhHHhHhh---hhhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCce
Q 005045 389 DNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQ---QQGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDF 464 (717)
Q Consensus 389 ~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 464 (717)
++|++.+.||+|++|.||.|+.+ +++.||+|.+... .......+.+|+++++.++||||+++++.+. ..+.
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~ 76 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFI-----EDNE 76 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEE-----ECCe
Confidence 58999999999999999999965 7899999976532 2344567889999999999999999999853 3458
Q ss_pred EEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeee
Q 005045 465 KALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDF 544 (717)
Q Consensus 465 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Df 544 (717)
.++||||+++++|.+++..... ....+++..+..++.|++.|++|||++ +++|+||+|+||+++.++.++|+||
T Consensus 77 ~~~v~e~~~~~~L~~~~~~~~~---~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~nil~~~~~~~~l~d~ 150 (267)
T cd08228 77 LNIVLELADAGDLSQMIKYFKK---QKRLIPERTVWKYFVQLCSAVEHMHSR---RVMHRDIKPANVFITATGVVKLGDL 150 (267)
T ss_pred EEEEEEecCCCcHHHHHHHhhh---ccCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCCHHHEEEcCCCCEEECcc
Confidence 8999999999999988853211 114578999999999999999999997 9999999999999999999999999
Q ss_pred ccchhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHHHhc
Q 005045 545 GLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVSMA 623 (717)
Q Consensus 545 g~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~ 623 (717)
|.+...... ........++..|+|||.+.+ .++.++|+||+|+++|+|++|..||................
T Consensus 151 g~~~~~~~~-------~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~~~- 222 (267)
T cd08228 151 GLGRFFSSK-------TTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQ- 222 (267)
T ss_pred ccceeccch-------hHHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHHHhc-
Confidence 988765211 111122457888999999654 57899999999999999999999986532221111111100
Q ss_pred CChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHHHHH
Q 005045 624 LPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVNNLK 703 (717)
Q Consensus 624 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~~l~ 703 (717)
...+.. ....++..+.+++.+||+.+|++|||+.||++.++
T Consensus 223 -------~~~~~~--------------------------------~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~ 263 (267)
T cd08228 223 -------CDYPPL--------------------------------PTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAK 263 (267)
T ss_pred -------CCCCCC--------------------------------ChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHH
Confidence 000000 01223566889999999999999999999999999
Q ss_pred HHH
Q 005045 704 TIR 706 (717)
Q Consensus 704 ~i~ 706 (717)
+++
T Consensus 264 ~~~ 266 (267)
T cd08228 264 QMH 266 (267)
T ss_pred Hhc
Confidence 875
No 72
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=1.9e-36 Score=315.14 Aligned_cols=191 Identities=27% Similarity=0.397 Sum_probs=162.3
Q ss_pred cCcccccceEEEEeC-CCchhhhHHhHhh---hhhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceEEEEEecC
Q 005045 397 IGTGSFGSVYKGTLG-DGTIVAIKVLKLQ---QQGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFKALVFEFM 472 (717)
Q Consensus 397 ig~g~~g~v~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~lv~e~~ 472 (717)
||+|+||.||+|.+. +++.||+|++... .......+..|+.++++++||||+++++.+ ...+..++||||+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~~~~~lv~e~~ 75 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSF-----QSPEKLYLVLAFI 75 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEE-----ecCCeEEEEEcCC
Confidence 699999999999965 6888999988643 233456778899999999999999998884 4456899999999
Q ss_pred CCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeeccchhccc
Q 005045 473 SNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFE 552 (717)
Q Consensus 473 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 552 (717)
++++|.+++... ..+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||.+.....
T Consensus 76 ~~g~L~~~l~~~-------~~~~~~~~~~~~~qi~~~l~~lH~~---~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~ 145 (312)
T cd05585 76 NGGELFHHLQRE-------GRFDLSRARFYTAELLCALENLHKF---NVIYRDLKPENILLDYQGHIALCDFGLCKLNMK 145 (312)
T ss_pred CCCcHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHeEECCCCcEEEEECcccccCcc
Confidence 999999998754 5689999999999999999999997 999999999999999999999999999875311
Q ss_pred ccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHhCCCCCCCC
Q 005045 553 ISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRPTGDM 609 (717)
Q Consensus 553 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~ 609 (717)
.........|++.|+|||++.+ .++.++||||+||++|+|++|..||...
T Consensus 146 -------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~ 196 (312)
T cd05585 146 -------DDDKTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDE 196 (312)
T ss_pred -------CCCccccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCC
Confidence 1112233568999999999765 4899999999999999999999999653
No 73
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=3e-36 Score=304.75 Aligned_cols=250 Identities=26% Similarity=0.411 Sum_probs=194.9
Q ss_pred cccccccccCcccccceEEEEeCCCchhhhHHhHhhhhhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceEEEE
Q 005045 389 DNFSKENLIGTGSFGSVYKGTLGDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFKALV 468 (717)
Q Consensus 389 ~~y~~~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~lv 468 (717)
++|++.+.||+|+||.||+|.++++..+|+|.+..... ....+.+|++++++++||||+++++++. ..+..++|
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~iv 77 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGAM-SEEDFIEEAKVMMKLSHPKLVQLYGVCT-----QQKPLYIV 77 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEeccCceEEEEecccCCc-cHHHHHHHHHHHHHCCCCCceeEEEEEc-----cCCCEEEE
Confidence 57889999999999999999988778899998764332 2356788999999999999999999853 44578999
Q ss_pred EecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeeccch
Q 005045 469 FEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAK 548 (717)
Q Consensus 469 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~ 548 (717)
|||+++++|.+++.... ..+++..+..++.|++.||+|||+. +++||||+|+||+++.++.+||+|||.+.
T Consensus 78 ~e~~~~~~L~~~~~~~~------~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~d~g~~~ 148 (256)
T cd05114 78 TEFMENGCLLNYLRQRQ------GKLSKDMLLSMCQDVCEGMEYLERN---SFIHRDLAARNCLVSSTGVVKVSDFGMTR 148 (256)
T ss_pred EEcCCCCcHHHHHHhCc------cCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcceEEEcCCCeEEECCCCCcc
Confidence 99999999999987542 3578999999999999999999997 99999999999999999999999999887
Q ss_pred hcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHh-CCCCCCCCCCCchhhhHHHHhcCCh
Q 005045 549 FLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFT-GKRPTGDMFKDDFSIHMFVSMALPD 626 (717)
Q Consensus 549 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 626 (717)
...... ........++..|+|||.+.+ .++.++|||||||++|+|++ |+.||...... .........
T Consensus 149 ~~~~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~--~~~~~i~~~--- 217 (256)
T cd05114 149 YVLDDE------YTSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNY--EVVEMISRG--- 217 (256)
T ss_pred ccCCCc------eeccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHH--HHHHHHHCC---
Confidence 542111 111112235567999999765 58899999999999999999 89998653211 111111000
Q ss_pred hhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHHHH
Q 005045 627 HVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVNNL 702 (717)
Q Consensus 627 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~~l 702 (717)
.... .+...+..+.+++.+||+.+|++|||++|+++.|
T Consensus 218 --------~~~~------------------------------~~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l 255 (256)
T cd05114 218 --------FRLY------------------------------RPKLASMTVYEVMYSCWHEKPEGRPTFAELLRAI 255 (256)
T ss_pred --------CCCC------------------------------CCCCCCHHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence 0000 0011144678999999999999999999999886
No 74
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=3.6e-36 Score=309.05 Aligned_cols=261 Identities=26% Similarity=0.480 Sum_probs=200.8
Q ss_pred ccccccccccCcccccceEEEEeC-C-----CchhhhHHhHhhh-hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCC
Q 005045 388 TDNFSKENLIGTGSFGSVYKGTLG-D-----GTIVAIKVLKLQQ-QGALKSFIDECNALKSTRHRNILRVITACSSVDLE 460 (717)
Q Consensus 388 ~~~y~~~~~ig~g~~g~v~~~~~~-~-----~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~ 460 (717)
.++|++.+.||+|++|.||.|... . .+.|++|.+.... ......+.+|++++++++||||+++++++.
T Consensus 4 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~----- 78 (283)
T cd05048 4 LSAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCT----- 78 (283)
T ss_pred hHHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEc-----
Confidence 458999999999999999999853 2 2568999886442 334567889999999999999999999853
Q ss_pred CCceEEEEEecCCCCChhhhccCCCCCc---------ccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCE
Q 005045 461 GNDFKALVFEFMSNGNLDQWLHPSPAEH---------YQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNV 531 (717)
Q Consensus 461 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~---------~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NI 531 (717)
.....+++|||+++++|.+++....... .....+++..++.++.|++.|++|||+. +++||||||+||
T Consensus 79 ~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Ni 155 (283)
T cd05048 79 KEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSH---HFVHRDLAARNC 155 (283)
T ss_pred CCCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccccceE
Confidence 3457899999999999999986542110 0114578899999999999999999998 999999999999
Q ss_pred EeCCCCceEEeeeccchhcccccCCCCCCcceeecccccccccCCCcc-CCCCCcccchhhHHHHHHHHHh-CCCCCCCC
Q 005045 532 LLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHM-NGQVSILGDIYSYGILLLEMFT-GKRPTGDM 609 (717)
Q Consensus 532 ll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~-~~~~~~~sDvwslG~vl~ellt-g~~p~~~~ 609 (717)
+++.++.++|+|||.+....... .........++..|+|||.+ .+.++.++|||||||++|||++ |..||.+.
T Consensus 156 l~~~~~~~~L~dfg~~~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~ 230 (283)
T cd05048 156 LVGEGLTVKISDFGLSRDIYSAD-----YYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGF 230 (283)
T ss_pred EEcCCCcEEECCCcceeeccccc-----cccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCC
Confidence 99999999999999987542111 11112233467889999985 4568999999999999999998 99998764
Q ss_pred CCCchhhhHHHHhcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCc
Q 005045 610 FKDDFSIHMFVSMALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSP 689 (717)
Q Consensus 610 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p 689 (717)
...+ ....+. ..... ..+..++.++.+++.+||+.+|
T Consensus 231 ~~~~--~~~~i~-----------~~~~~------------------------------~~~~~~~~~~~~l~~~c~~~~p 267 (283)
T cd05048 231 SNQE--VIEMIR-----------SRQLL------------------------------PCPEDCPARVYALMIECWNEIP 267 (283)
T ss_pred CHHH--HHHHHH-----------cCCcC------------------------------CCcccCCHHHHHHHHHHccCCh
Confidence 3221 110000 00000 0123457789999999999999
Q ss_pred CCCCCHHHHHHHHHH
Q 005045 690 RERIAMNVVVNNLKT 704 (717)
Q Consensus 690 ~~Rps~~eil~~l~~ 704 (717)
++||+++||++.|++
T Consensus 268 ~~Rp~~~~i~~~l~~ 282 (283)
T cd05048 268 ARRPRFKDIHTRLRS 282 (283)
T ss_pred hhCcCHHHHHHHHhc
Confidence 999999999999975
No 75
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=5.5e-36 Score=304.07 Aligned_cols=256 Identities=25% Similarity=0.446 Sum_probs=199.6
Q ss_pred cccccccccccCcccccceEEEEeC-CCchhhhHHhHhhhhhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceE
Q 005045 387 STDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFK 465 (717)
Q Consensus 387 ~~~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~ 465 (717)
...+|++.++||+|++|.||+|.++ .++.||+|.+.... .....+.+|++++++++|+||+++++.+. ..+..
T Consensus 4 ~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~ 77 (263)
T cd05052 4 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCT-----REPPF 77 (263)
T ss_pred chHHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCc-hHHHHHHHHHHHHHhCCCCChhheEEEEc-----CCCCc
Confidence 3567899999999999999999965 68889999887443 23467889999999999999999999853 34578
Q ss_pred EEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeec
Q 005045 466 ALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFG 545 (717)
Q Consensus 466 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg 545 (717)
+++|||+++++|.+++..... ..+++..++.++.|++.|++|||+. +++||||||+||+++.++.+||+|||
T Consensus 78 ~lv~e~~~~~~L~~~~~~~~~-----~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~df~ 149 (263)
T cd05052 78 YIITEFMTYGNLLDYLRECNR-----QEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFG 149 (263)
T ss_pred EEEEEeCCCCcHHHHHHhCCC-----CCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCcEEeCCCc
Confidence 999999999999999865421 4688999999999999999999997 99999999999999999999999999
Q ss_pred cchhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHh-CCCCCCCCCCCchhhhHHHHhc
Q 005045 546 LAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFT-GKRPTGDMFKDDFSIHMFVSMA 623 (717)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~ 623 (717)
.+....... ........++..|+|||.+.+ .++.++|||||||++|+|++ |..||.....++ ......
T Consensus 150 ~~~~~~~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~--~~~~~~-- 219 (263)
T cd05052 150 LSRLMTGDT------YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ--VYELLE-- 219 (263)
T ss_pred cccccccce------eeccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH--HHHHHH--
Confidence 987652211 011111234567999999655 57899999999999999998 999986532111 100000
Q ss_pred CChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHHHHH
Q 005045 624 LPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVNNLK 703 (717)
Q Consensus 624 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~~l~ 703 (717)
...... .+..++..+.+++.+||+.+|++|||+.|+++.|+
T Consensus 220 ------~~~~~~---------------------------------~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~ 260 (263)
T cd05052 220 ------KGYRME---------------------------------RPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFE 260 (263)
T ss_pred ------CCCCCC---------------------------------CCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHH
Confidence 000000 11223567889999999999999999999999998
Q ss_pred HH
Q 005045 704 TI 705 (717)
Q Consensus 704 ~i 705 (717)
.+
T Consensus 261 ~~ 262 (263)
T cd05052 261 TM 262 (263)
T ss_pred hh
Confidence 75
No 76
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=1.5e-36 Score=318.56 Aligned_cols=199 Identities=28% Similarity=0.380 Sum_probs=169.8
Q ss_pred ccccccccccccCcccccceEEEEeC-C-CchhhhHHhHhhh---hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCC
Q 005045 386 KSTDNFSKENLIGTGSFGSVYKGTLG-D-GTIVAIKVLKLQQ---QGALKSFIDECNALKSTRHRNILRVITACSSVDLE 460 (717)
Q Consensus 386 ~~~~~y~~~~~ig~g~~g~v~~~~~~-~-~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~ 460 (717)
...++|++.+.||+|+||.||+|.++ . ++.||+|.+.... ......+.+|+++++.++||||+++++++ .
T Consensus 27 ~~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~-----~ 101 (340)
T PTZ00426 27 MKYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSF-----K 101 (340)
T ss_pred CChhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEE-----E
Confidence 35668999999999999999999854 3 3679999875432 33456788999999999999999999985 4
Q ss_pred CCceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceE
Q 005045 461 GNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAH 540 (717)
Q Consensus 461 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~k 540 (717)
+.+..++||||+++++|.+++... ..+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+|
T Consensus 102 ~~~~~~lv~Ey~~~g~L~~~i~~~-------~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~ik 171 (340)
T PTZ00426 102 DESYLYLVLEFVIGGEFFTFLRRN-------KRFPNDVGCFYAAQIVLIFEYLQSL---NIVYRDLKPENLLLDKDGFIK 171 (340)
T ss_pred eCCEEEEEEeCCCCCcHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEE
Confidence 456899999999999999999755 5689999999999999999999998 999999999999999999999
Q ss_pred EeeeccchhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHhCCCCCCCC
Q 005045 541 VGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRPTGDM 609 (717)
Q Consensus 541 l~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~ 609 (717)
|+|||.+..... ......||+.|+|||++.+ .++.++|||||||++|+|++|..||...
T Consensus 172 L~DFG~a~~~~~----------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~ 231 (340)
T PTZ00426 172 MTDFGFAKVVDT----------RTYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYAN 231 (340)
T ss_pred EecCCCCeecCC----------CcceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCC
Confidence 999999875411 1123568999999999755 4799999999999999999999999754
No 77
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=3.8e-36 Score=309.47 Aligned_cols=266 Identities=25% Similarity=0.443 Sum_probs=203.8
Q ss_pred ccccccccccCcccccceEEEEeC------CCchhhhHHhHhhhhhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCC
Q 005045 388 TDNFSKENLIGTGSFGSVYKGTLG------DGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRVITACSSVDLEG 461 (717)
Q Consensus 388 ~~~y~~~~~ig~g~~g~v~~~~~~------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~ 461 (717)
..+|.+.+.+|+|+||.||.+... ++..+|+|.+..........+.+|+++++++.||||+++++++. .
T Consensus 4 ~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~ 78 (288)
T cd05093 4 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCV-----E 78 (288)
T ss_pred hHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEe-----c
Confidence 457999999999999999999842 34568889887655555678899999999999999999999854 3
Q ss_pred CceEEEEEecCCCCChhhhccCCCCC------cccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCC
Q 005045 462 NDFKALVFEFMSNGNLDQWLHPSPAE------HYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDK 535 (717)
Q Consensus 462 ~~~~~lv~e~~~~~~L~~~l~~~~~~------~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~ 535 (717)
.+..++||||+++++|.+++...... ......+++..++.++.|++.||+|||+. +++||||||+||+++.
T Consensus 79 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~---~i~H~dlkp~Nili~~ 155 (288)
T cd05093 79 GDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGE 155 (288)
T ss_pred CCccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEcc
Confidence 45889999999999999998643211 01123589999999999999999999997 9999999999999999
Q ss_pred CCceEEeeeccchhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHh-CCCCCCCCCCCc
Q 005045 536 DMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFT-GKRPTGDMFKDD 613 (717)
Q Consensus 536 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~ 613 (717)
++.++|+|||.+....... .........++..|+|||.+.+ .++.++|||||||++|+|++ |..||.......
T Consensus 156 ~~~~kl~dfg~~~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~ 230 (288)
T cd05093 156 NLLVKIGDFGMSRDVYSTD-----YYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNE 230 (288)
T ss_pred CCcEEeccCCccccccCCc-----eeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH
Confidence 9999999999987542111 1111122335678999999765 47999999999999999998 999986543211
Q ss_pred hhhhHHHHhcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCC
Q 005045 614 FSIHMFVSMALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERI 693 (717)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp 693 (717)
....... ..... .+..++..+.+++.+||+.+|.+||
T Consensus 231 --~~~~i~~-----------~~~~~------------------------------~~~~~~~~l~~li~~~l~~~p~~Rp 267 (288)
T cd05093 231 --VIECITQ-----------GRVLQ------------------------------RPRTCPKEVYDLMLGCWQREPHMRL 267 (288)
T ss_pred --HHHHHHc-----------CCcCC------------------------------CCCCCCHHHHHHHHHHccCChhhCC
Confidence 0000000 00000 0011245688999999999999999
Q ss_pred CHHHHHHHHHHHHHHH
Q 005045 694 AMNVVVNNLKTIRNCF 709 (717)
Q Consensus 694 s~~eil~~l~~i~~~~ 709 (717)
|+.|+++.|+.+....
T Consensus 268 t~~~v~~~l~~~~~~~ 283 (288)
T cd05093 268 NIKEIHSLLQNLAKAS 283 (288)
T ss_pred CHHHHHHHHHHHHHhc
Confidence 9999999999998654
No 78
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=5.3e-36 Score=307.65 Aligned_cols=271 Identities=27% Similarity=0.373 Sum_probs=200.0
Q ss_pred ccc-ccccccCcccccceEEEEe-----CCCchhhhHHhHhhh-hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCC
Q 005045 389 DNF-SKENLIGTGSFGSVYKGTL-----GDGTIVAIKVLKLQQ-QGALKSFIDECNALKSTRHRNILRVITACSSVDLEG 461 (717)
Q Consensus 389 ~~y-~~~~~ig~g~~g~v~~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~ 461 (717)
++| ++.+.||+|+||.||.+.. .+++.||+|.+.... ......+.+|++++++++||||+++++++.. ..
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~---~~ 79 (283)
T cd05080 3 KRYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSE---QG 79 (283)
T ss_pred hhhceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEec---CC
Confidence 355 8999999999999988652 367789999987543 2345678899999999999999999998643 22
Q ss_pred CceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEE
Q 005045 462 NDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHV 541 (717)
Q Consensus 462 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl 541 (717)
....++||||+++++|.+++.. ..+++..+..++.|++.|++|||+. +++||||||+||+++.++.++|
T Consensus 80 ~~~~~lv~e~~~~~~l~~~~~~--------~~l~~~~~~~i~~~l~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l 148 (283)
T cd05080 80 GKGLQLIMEYVPLGSLRDYLPK--------HKLNLAQLLLFAQQICEGMAYLHSQ---HYIHRDLAARNVLLDNDRLVKI 148 (283)
T ss_pred CceEEEEecCCCCCCHHHHHHH--------cCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccChheEEEcCCCcEEE
Confidence 4468999999999999999864 3489999999999999999999997 9999999999999999999999
Q ss_pred eeeccchhcccccCCCCCCcceeecccccccccCCCccC-CCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHH
Q 005045 542 GDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMN-GQVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFV 620 (717)
Q Consensus 542 ~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~ 620 (717)
+|||.+....... ..........++..|+|||.+. +.++.++|||||||++|+|++|..||......-.......
T Consensus 149 ~dfg~~~~~~~~~----~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~ 224 (283)
T cd05080 149 GDFGLAKAVPEGH----EYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPK 224 (283)
T ss_pred eecccccccCCcc----hhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhccc
Confidence 9999987652111 1011111223566799999965 4589999999999999999999999865422110000000
Q ss_pred Hhc-CChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHH
Q 005045 621 SMA-LPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVV 699 (717)
Q Consensus 621 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil 699 (717)
... ....+.+..+.... ...+..++..+.+++.+||+.+|++|||+++|+
T Consensus 225 ~~~~~~~~~~~~~~~~~~-----------------------------~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~ 275 (283)
T cd05080 225 QGQMTVVRLIELLERGMR-----------------------------LPCPKNCPQEVYILMKNCWETEAKFRPTFRSLI 275 (283)
T ss_pred ccccchhhhhhhhhcCCC-----------------------------CCCCCCCCHHHHHHHHHHhccChhhCCCHHHHH
Confidence 000 00001111111100 011233467889999999999999999999999
Q ss_pred HHHHHHH
Q 005045 700 NNLKTIR 706 (717)
Q Consensus 700 ~~l~~i~ 706 (717)
+.|+.+.
T Consensus 276 ~~l~~~~ 282 (283)
T cd05080 276 PILKEMH 282 (283)
T ss_pred HHHHHhh
Confidence 9999875
No 79
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=3.5e-36 Score=314.88 Aligned_cols=241 Identities=24% Similarity=0.338 Sum_probs=189.8
Q ss_pred cccCcccccceEEEEeC-CCchhhhHHhHhhh---hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceEEEEEe
Q 005045 395 NLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQ---QGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFKALVFE 470 (717)
Q Consensus 395 ~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~lv~e 470 (717)
+.||+|+||.||++..+ +++.||+|++.... ......+.+|+++++.++||||+++.+.+ ...+..++|||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~-----~~~~~~~lv~E 75 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSF-----QTKDRLCFVME 75 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEE-----EcCCEEEEEEe
Confidence 36899999999999965 78999999986442 33456778899999999999999998884 45568999999
Q ss_pred cCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeeccchhc
Q 005045 471 FMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFL 550 (717)
Q Consensus 471 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~ 550 (717)
|+++++|.+++... ..+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||++...
T Consensus 76 y~~~g~L~~~l~~~-------~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~NIll~~~~~~kL~DfG~~~~~ 145 (328)
T cd05593 76 YVNGGELFFHLSRE-------RVFSEDRTRFYGAEIVSALDYLHSG---KIVYRDLKLENLMLDKDGHIKITDFGLCKEG 145 (328)
T ss_pred CCCCCCHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeEECCCCcEEEecCcCCccC
Confidence 99999999888654 5689999999999999999999997 9999999999999999999999999998753
Q ss_pred ccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHHHhcCChhhh
Q 005045 551 FEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVSMALPDHVM 629 (717)
Q Consensus 551 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 629 (717)
.. .........|++.|+|||++.+ .++.++|||||||++|+|++|..||....... .. .
T Consensus 146 ~~-------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~--~~-----------~ 205 (328)
T cd05593 146 IT-------DAATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEK--LF-----------E 205 (328)
T ss_pred CC-------cccccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHH--HH-----------H
Confidence 11 1111233568999999999755 58999999999999999999999996532111 00 0
Q ss_pred hhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCC-----CHHHHHHH
Q 005045 630 DILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERI-----AMNVVVNN 701 (717)
Q Consensus 630 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp-----s~~eil~~ 701 (717)
.+...... .+...+..+.+++.+||+.+|++|| ++.|+++.
T Consensus 206 ~~~~~~~~-------------------------------~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 251 (328)
T cd05593 206 LILMEDIK-------------------------------FPRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRH 251 (328)
T ss_pred HhccCCcc-------------------------------CCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcC
Confidence 00000000 0011245578899999999999997 89998864
No 80
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-36 Score=308.40 Aligned_cols=265 Identities=22% Similarity=0.383 Sum_probs=214.8
Q ss_pred cccccccccccCcccccceEEEEeCCCchhhhHHhHhhh-hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceE
Q 005045 387 STDNFSKENLIGTGSFGSVYKGTLGDGTIVAIKVLKLQQ-QGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFK 465 (717)
Q Consensus 387 ~~~~y~~~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~ 465 (717)
+.+...+.++||+|-||.|.++....+..||+|.++... ...+..|.+|+++|.+++||||+.++++|.. ++.+
T Consensus 536 PRs~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~-----DePi 610 (807)
T KOG1094|consen 536 PRSRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQ-----DDPL 610 (807)
T ss_pred chhheehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeec-----CCch
Confidence 455678899999999999999998778999999998664 4456899999999999999999999999754 3489
Q ss_pred EEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeec
Q 005045 466 ALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFG 545 (717)
Q Consensus 466 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg 545 (717)
++|+||++.|+|.+++.++.. +.+.......|+.||+.||+||.+. .+||||+.++|++++.++++||+|||
T Consensus 611 cmI~EYmEnGDLnqFl~ahea-----pt~~t~~~vsi~tqiasgmaYLes~---nfVHrd~a~rNcLv~~e~~iKiadfg 682 (807)
T KOG1094|consen 611 CMITEYMENGDLNQFLSAHEL-----PTAETAPGVSICTQIASGMAYLESL---NFVHRDLATRNCLVDGEFTIKIADFG 682 (807)
T ss_pred HHHHHHHhcCcHHHHHHhccC-----cccccchhHHHHHHHHHHHHHHHhh---chhhccccccceeecCcccEEecCcc
Confidence 999999999999999987743 2344455667999999999999998 99999999999999999999999999
Q ss_pred cchhcccccCCCCCCcceeecccccccccCCCc-cCCCCCcccchhhHHHHHHHHHh--CCCCCCCCCCCchhhhHHHHh
Q 005045 546 LAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEH-MNGQVSILGDIYSYGILLLEMFT--GKRPTGDMFKDDFSIHMFVSM 622 (717)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~sDvwslG~vl~ellt--g~~p~~~~~~~~~~~~~~~~~ 622 (717)
+++-+. ....+...+...-+..|||||. +.|+++.+||||+||+++||+++ .+.||....++ ...+....
T Consensus 683 msR~ly-----sg~yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e--~vven~~~ 755 (807)
T KOG1094|consen 683 MSRNLY-----SGDYYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDE--QVVENAGE 755 (807)
T ss_pred cccccc-----cCCceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHH--HHHHhhhh
Confidence 999652 2233444455667789999999 78999999999999999999887 88999776443 22223222
Q ss_pred cCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHHHH
Q 005045 623 ALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVNNL 702 (717)
Q Consensus 623 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~~l 702 (717)
.++..-.+ .-...+.-|+..+.+++.+||..+.++|||++++...|
T Consensus 756 ~~~~~~~~----------------------------------~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~l 801 (807)
T KOG1094|consen 756 FFRDQGRQ----------------------------------VVLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFL 801 (807)
T ss_pred hcCCCCcc----------------------------------eeccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHH
Confidence 22221111 11124567899999999999999999999999999887
Q ss_pred HHH
Q 005045 703 KTI 705 (717)
Q Consensus 703 ~~i 705 (717)
...
T Consensus 802 q~~ 804 (807)
T KOG1094|consen 802 QED 804 (807)
T ss_pred HHh
Confidence 653
No 81
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=3.3e-36 Score=308.80 Aligned_cols=260 Identities=28% Similarity=0.508 Sum_probs=200.5
Q ss_pred ccccccccccCcccccceEEEEeC------CCchhhhHHhHhhhhh-HHHHHHHHHHHHhcCCCCceeEEEEeeccccCC
Q 005045 388 TDNFSKENLIGTGSFGSVYKGTLG------DGTIVAIKVLKLQQQG-ALKSFIDECNALKSTRHRNILRVITACSSVDLE 460 (717)
Q Consensus 388 ~~~y~~~~~ig~g~~g~v~~~~~~------~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~ 460 (717)
.++|.+.+.||+|++|.||+|... +++.||+|.+...... ..+.+.+|+++++.+.|+||+++++.+.
T Consensus 4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~----- 78 (280)
T cd05049 4 RDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCT----- 78 (280)
T ss_pred hHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEe-----
Confidence 567999999999999999999853 3477999998754333 4578899999999999999999999954
Q ss_pred CCceEEEEEecCCCCChhhhccCCCCC-------cccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEe
Q 005045 461 GNDFKALVFEFMSNGNLDQWLHPSPAE-------HYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLL 533 (717)
Q Consensus 461 ~~~~~~lv~e~~~~~~L~~~l~~~~~~-------~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll 533 (717)
.....++||||+++++|.+++...... ......+++..+..++.|++.|++|||+. +++||||||+||++
T Consensus 79 ~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~h~dlkp~nili 155 (280)
T cd05049 79 EGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQ---HFVHRDLATRNCLV 155 (280)
T ss_pred cCCCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeeccccccceEEE
Confidence 345899999999999999998754321 11225688999999999999999999997 99999999999999
Q ss_pred CCCCceEEeeeccchhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHh-CCCCCCCCCC
Q 005045 534 DKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFT-GKRPTGDMFK 611 (717)
Q Consensus 534 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~ellt-g~~p~~~~~~ 611 (717)
+.++.++|+|||.+....... .........++..|+|||++.+ .++.++|||||||++|+|++ |..||.....
T Consensus 156 ~~~~~~kl~d~g~~~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~ 230 (280)
T cd05049 156 GYDLVVKIGDFGMSRDVYTTD-----YYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSN 230 (280)
T ss_pred cCCCeEEECCcccceecccCc-----ceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCH
Confidence 999999999999987542111 1111223345678999999654 58999999999999999998 9999865432
Q ss_pred CchhhhHHHHhcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCC
Q 005045 612 DDFSIHMFVSMALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRE 691 (717)
Q Consensus 612 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~ 691 (717)
+. ...... ...... .+..++..+.+++.+||+.+|++
T Consensus 231 ~~--~~~~~~-----------~~~~~~------------------------------~~~~~~~~~~~li~~~l~~~p~~ 267 (280)
T cd05049 231 EE--VIECIT-----------QGRLLQ------------------------------RPRTCPSEVYDIMLGCWKRDPQQ 267 (280)
T ss_pred HH--HHHHHH-----------cCCcCC------------------------------CCCCCCHHHHHHHHHHcCCCccc
Confidence 21 111110 000000 01122566889999999999999
Q ss_pred CCCHHHHHHHHH
Q 005045 692 RIAMNVVVNNLK 703 (717)
Q Consensus 692 Rps~~eil~~l~ 703 (717)
|||+.||++.|+
T Consensus 268 Rp~~~eil~~l~ 279 (280)
T cd05049 268 RINIKDIHERLQ 279 (280)
T ss_pred CCCHHHHHHHhh
Confidence 999999999885
No 82
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=5.1e-36 Score=303.97 Aligned_cols=256 Identities=28% Similarity=0.425 Sum_probs=199.8
Q ss_pred ccccccccccccCcccccceEEEEeCCCchhhhHHhHhhhhhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceE
Q 005045 386 KSTDNFSKENLIGTGSFGSVYKGTLGDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFK 465 (717)
Q Consensus 386 ~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~ 465 (717)
...++|++.+.||+|++|.||+|.+.+++.||+|.+..... ..+.+.+|++++++++||||+++++.+ ...+..
T Consensus 3 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~ 76 (261)
T cd05068 3 IDRTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGTM-DPKDFLAEAQIMKKLRHPKLIQLYAVC-----TLEEPI 76 (261)
T ss_pred cchhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCcc-cHHHHHHHHHHHHHCCCCCccceeEEE-----ecCCCe
Confidence 34578999999999999999999987778899999875432 246688899999999999999999985 344578
Q ss_pred EEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeec
Q 005045 466 ALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFG 545 (717)
Q Consensus 466 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg 545 (717)
++||||+++++|.+++..... ..+++..+..++.|++.|+.|||+. +++||||||+||+++.++.++|+|||
T Consensus 77 ~lv~e~~~~~~L~~~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg 148 (261)
T cd05068 77 YIVTELMKYGSLLEYLQGGAG-----RALKLPQLIDMAAQVASGMAYLEAQ---NYIHRDLAARNVLVGENNICKVADFG 148 (261)
T ss_pred eeeeecccCCcHHHHHhccCC-----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCcceEEEcCCCCEEECCcc
Confidence 999999999999999875421 4689999999999999999999997 99999999999999999999999999
Q ss_pred cchhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHh-CCCCCCCCCCCchhhhHHHHhc
Q 005045 546 LAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFT-GKRPTGDMFKDDFSIHMFVSMA 623 (717)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~ 623 (717)
.+....... .....+...+..|+|||.+.+ .++.++||||||+++|+|++ |+.||...... .......
T Consensus 149 ~~~~~~~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~--~~~~~~~-- 218 (261)
T cd05068 149 LARVIKEDI------YEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNA--EVLQQVD-- 218 (261)
T ss_pred eEEEccCCc------ccccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHH--HHHHHHH--
Confidence 988652110 111111223457999999655 57999999999999999999 99998653211 0100000
Q ss_pred CChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHHHHH
Q 005045 624 LPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVNNLK 703 (717)
Q Consensus 624 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~~l~ 703 (717)
...... .+..++..+.+++.+|++.+|++||++.++++.|+
T Consensus 219 ----------~~~~~~-----------------------------~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~ 259 (261)
T cd05068 219 ----------QGYRMP-----------------------------CPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLE 259 (261)
T ss_pred ----------cCCCCC-----------------------------CCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHh
Confidence 000000 01122556889999999999999999999999997
Q ss_pred H
Q 005045 704 T 704 (717)
Q Consensus 704 ~ 704 (717)
.
T Consensus 260 ~ 260 (261)
T cd05068 260 D 260 (261)
T ss_pred c
Confidence 5
No 83
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=3.3e-36 Score=311.03 Aligned_cols=247 Identities=25% Similarity=0.426 Sum_probs=201.4
Q ss_pred ccccccCcccccceEEEEeC-CCchhhhHHhHhh----hhhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceEE
Q 005045 392 SKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQ----QQGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFKA 466 (717)
Q Consensus 392 ~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~----~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~ 466 (717)
+...+||+|+|-+||+|.+. +|-.||--.++.. .++..++|..|+.+|+.|+||||+++|..+++.. .+...
T Consensus 43 k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~---n~~in 119 (632)
T KOG0584|consen 43 KFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTD---NKTIN 119 (632)
T ss_pred ehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCC---Cceee
Confidence 44578999999999999975 7888887666543 3455689999999999999999999999987654 36688
Q ss_pred EEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeC-CCCceEEeeec
Q 005045 467 LVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLD-KDMTAHVGDFG 545 (717)
Q Consensus 467 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~-~~~~~kl~Dfg 545 (717)
+|+|.+..|+|+.|.++. ++++...++.|++||++||.|||++ ..+|+|||||-+||||+ ..|.|||+|+|
T Consensus 120 ~iTEL~TSGtLr~Y~kk~-------~~vn~kaik~W~RQILkGL~yLHs~-~PPIIHRDLKCDNIFinG~~G~VKIGDLG 191 (632)
T KOG0584|consen 120 FITELFTSGTLREYRKKH-------RRVNIKAIKSWCRQILKGLVYLHSQ-DPPIIHRDLKCDNIFVNGNLGEVKIGDLG 191 (632)
T ss_pred eeeecccCCcHHHHHHHh-------ccCCHHHHHHHHHHHHHHhhhhhcC-CCCccccccccceEEEcCCcCceeecchh
Confidence 999999999999999876 6789999999999999999999997 46899999999999998 46899999999
Q ss_pred cchhcccccCCCCCCcceeecccccccccCCCccCCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHHHhcCC
Q 005045 546 LAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNGQVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVSMALP 625 (717)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 625 (717)
+|... ........+|||.|||||+....|...+||||||+++.||.|+..||..-.....-+....+..-|
T Consensus 192 LAtl~---------r~s~aksvIGTPEFMAPEmYEE~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGiKP 262 (632)
T KOG0584|consen 192 LATLL---------RKSHAKSVIGTPEFMAPEMYEENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGIKP 262 (632)
T ss_pred HHHHh---------hccccceeccCccccChHHHhhhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCCCH
Confidence 99876 122334478999999999999999999999999999999999999997643332222222222223
Q ss_pred hhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHH
Q 005045 626 DHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVN 700 (717)
Q Consensus 626 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~ 700 (717)
..+..+-| .++.+||.+|+.. .++|||+.|+++
T Consensus 263 ~sl~kV~d-----------------------------------------Pevr~fIekCl~~-~~~R~sa~eLL~ 295 (632)
T KOG0584|consen 263 AALSKVKD-----------------------------------------PEVREFIEKCLAT-KSERLSAKELLK 295 (632)
T ss_pred HHhhccCC-----------------------------------------HHHHHHHHHHhcC-chhccCHHHHhh
Confidence 33333332 2357899999998 899999999985
No 84
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=100.00 E-value=3.4e-39 Score=329.30 Aligned_cols=339 Identities=25% Similarity=0.393 Sum_probs=178.4
Q ss_pred cEEEcCCCcCc-CCCCcCCcCCCCCCEEECCCCcccccCCcCCCCCCCCCEEEccCccccccCCccccCCCCCCEEeccC
Q 005045 13 QDLNLTYNYLS-GKIPTNLSHCTELRSFEASVNDFVGQIPNQLSSLTKLEIIGLGGSNLTGNVPAWIGNFSSLKALSLAW 91 (717)
Q Consensus 13 ~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~ 91 (717)
+-.|+++|.++ +..|.....++++++|.|...++. .+|..++.+.+|+.|.+++|++. .+-..++.|+.|+.+++.+
T Consensus 10 rGvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~HN~L~-~vhGELs~Lp~LRsv~~R~ 87 (1255)
T KOG0444|consen 10 RGVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAHNQLI-SVHGELSDLPRLRSVIVRD 87 (1255)
T ss_pred ecccccCCcCCCCcCchhHHHhhheeEEEechhhhh-hChHHHHHHhhhhhhhhhhhhhH-hhhhhhccchhhHHHhhhc
Confidence 44566666665 445666666666666666666665 56666666666666666666665 4555556666666666666
Q ss_pred CcCcc-cCChhhhccCCCCeEeccCCCCCCCCCccccCCCCccEEEcccCcccccCCcccccCCCCcceeeccccccccc
Q 005045 92 NNLRG-SIPNELGQLSGLGFFTLYGNFISGIIPSSIYNISSIYYFSVTQNQLHGQLPTDVGLTLPNLKIFAGAVNYFTGS 170 (717)
Q Consensus 92 n~l~~-~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~l~~~~~~~l~~L~~L~l~~n~l~~~ 170 (717)
|+++. -+|..+..+..|+.||||+|+++ ..|..+..-+++-.|+||+|+|. .+|..+|..+..|-.|+||+|++. .
T Consensus 88 N~LKnsGiP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~Ie-tIPn~lfinLtDLLfLDLS~NrLe-~ 164 (1255)
T KOG0444|consen 88 NNLKNSGIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIE-TIPNSLFINLTDLLFLDLSNNRLE-M 164 (1255)
T ss_pred cccccCCCCchhcccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccc-cCCchHHHhhHhHhhhccccchhh-h
Confidence 66542 24555555666666666666665 45555555566666666666665 666666666666666666666665 3
Q ss_pred CCccCCCCCCCCEEeccCccccccCCCCccCCCCCCeeeccccccCCcccCchhhhhhhccCCCCCEEEeecCcccCcCc
Q 005045 171 IPVSLSNASNLQVLDFAENGLTGTIPGNFGSLKDLVRLNFDQNELGSREIGDLNFLKFLANCTSLEVLGLARNSFGGEMP 250 (717)
Q Consensus 171 ~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p 250 (717)
+|.....+..|++|+|++|.+...--..+..+++|..|.+++.+-+-..+ |..+..+.+|..+|||.|.+. .+|
T Consensus 165 LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~-----Ptsld~l~NL~dvDlS~N~Lp-~vP 238 (1255)
T KOG0444|consen 165 LPPQIRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNI-----PTSLDDLHNLRDVDLSENNLP-IVP 238 (1255)
T ss_pred cCHHHHHHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccchhhcC-----CCchhhhhhhhhccccccCCC-cch
Confidence 45555556666666666665543222333344444444444433322211 333444445555555555555 455
Q ss_pred hhhhhccccccEEecCCCccCCCCCccccCCCCCCEEEccCCcCccccchhhhcCCCCCeEEcccCcCCC-CCCcccccc
Q 005045 251 ISIANLSTHLRRLTMGENLMHGNIPVGIGNLVNLNLLGLEGNNLSGSVPEVIGRLNKLEGLGLNVNKFSG-LIPSSLGNL 329 (717)
Q Consensus 251 ~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-~~~~~~~~l 329 (717)
+.+..+ ++|+.|+||+|+|+ .+........+|+.|+||+|+++ .+|++++++++|+.|.+.+|+++- -+|..++.+
T Consensus 239 ecly~l-~~LrrLNLS~N~it-eL~~~~~~W~~lEtLNlSrNQLt-~LP~avcKL~kL~kLy~n~NkL~FeGiPSGIGKL 315 (1255)
T KOG0444|consen 239 ECLYKL-RNLRRLNLSGNKIT-ELNMTEGEWENLETLNLSRNQLT-VLPDAVCKLTKLTKLYANNNKLTFEGIPSGIGKL 315 (1255)
T ss_pred HHHhhh-hhhheeccCcCcee-eeeccHHHHhhhhhhccccchhc-cchHHHhhhHHHHHHHhccCcccccCCccchhhh
Confidence 555544 24555555555544 23333334444555555555554 445555555555555555554431 124444444
Q ss_pred cccceeecccccccccCCcCccCcCCCceEEeecccC
Q 005045 330 TILTRLWMEENRLEGSIPPSLGNCQKLLVLNLSSNDL 366 (717)
Q Consensus 330 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l 366 (717)
.+|+.+..++|++. .+|++++.|..|+.|.|++|.+
T Consensus 316 ~~Levf~aanN~LE-lVPEglcRC~kL~kL~L~~NrL 351 (1255)
T KOG0444|consen 316 IQLEVFHAANNKLE-LVPEGLCRCVKLQKLKLDHNRL 351 (1255)
T ss_pred hhhHHHHhhccccc-cCchhhhhhHHHHHhcccccce
Confidence 44444444444444 4444444444444444444444
No 85
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=7.8e-36 Score=303.52 Aligned_cols=256 Identities=28% Similarity=0.456 Sum_probs=199.4
Q ss_pred ccccccccccCcccccceEEEEeC----CCchhhhHHhHhhh-hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCC
Q 005045 388 TDNFSKENLIGTGSFGSVYKGTLG----DGTIVAIKVLKLQQ-QGALKSFIDECNALKSTRHRNILRVITACSSVDLEGN 462 (717)
Q Consensus 388 ~~~y~~~~~ig~g~~g~v~~~~~~----~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~ 462 (717)
.++|++.+.||+|+||.||+|.++ +...||+|.+.... ......+.+|+.++++++||||+++++.+ ...
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~ 77 (266)
T cd05033 3 PSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVV-----TKS 77 (266)
T ss_pred hHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEE-----ecC
Confidence 467999999999999999999964 24578999876442 33456788999999999999999999984 345
Q ss_pred ceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEe
Q 005045 463 DFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVG 542 (717)
Q Consensus 463 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~ 542 (717)
+..++||||+++++|.+++.... ..+++..++.++.|++.|++|||++ +|+||||+|+||+++.++.++|+
T Consensus 78 ~~~~iv~e~~~~~~L~~~~~~~~------~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~di~p~nili~~~~~~~l~ 148 (266)
T cd05033 78 RPVMIITEYMENGSLDKFLREND------GKFTVGQLVGMLRGIASGMKYLSEM---NYVHRDLAARNILVNSNLVCKVS 148 (266)
T ss_pred CceEEEEEcCCCCCHHHHHHhcc------CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCCEEEC
Confidence 57899999999999999987543 4689999999999999999999997 99999999999999999999999
Q ss_pred eeccchhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHh-CCCCCCCCCCCchhhhHHH
Q 005045 543 DFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFT-GKRPTGDMFKDDFSIHMFV 620 (717)
Q Consensus 543 Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~ 620 (717)
|||.+....... .........++..|+|||.+.+ .++.++||||||+++|+|++ |..||....... .....
T Consensus 149 dfg~~~~~~~~~-----~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~--~~~~~ 221 (266)
T cd05033 149 DFGLSRRLEDSE-----ATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQD--VIKAV 221 (266)
T ss_pred ccchhhcccccc-----cceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHH--HHHHH
Confidence 999998763111 1111112334678999999764 58999999999999999998 999986532111 10000
Q ss_pred HhcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHH
Q 005045 621 SMALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVN 700 (717)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~ 700 (717)
. + .... +.+..++..+.+++.+|++.+|++||+++||++
T Consensus 222 ~--------~----~~~~-----------------------------~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~ 260 (266)
T cd05033 222 E--------D----GYRL-----------------------------PPPMDCPSALYQLMLDCWQKDRNERPTFSQIVS 260 (266)
T ss_pred H--------c----CCCC-----------------------------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 0 0 0000 001123566889999999999999999999999
Q ss_pred HHHHH
Q 005045 701 NLKTI 705 (717)
Q Consensus 701 ~l~~i 705 (717)
.|+++
T Consensus 261 ~l~~~ 265 (266)
T cd05033 261 TLDKM 265 (266)
T ss_pred HHHhh
Confidence 99875
No 86
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=9.2e-36 Score=307.10 Aligned_cols=267 Identities=25% Similarity=0.444 Sum_probs=204.8
Q ss_pred cccccccccccCcccccceEEEEeC------CCchhhhHHhHhhhhhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCC
Q 005045 387 STDNFSKENLIGTGSFGSVYKGTLG------DGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRVITACSSVDLE 460 (717)
Q Consensus 387 ~~~~y~~~~~ig~g~~g~v~~~~~~------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~ 460 (717)
..++|.+.+.||+|++|.||.|+.. ++..+++|.+........+.+.+|++++++++|+||+++++++ .
T Consensus 3 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~ 77 (291)
T cd05094 3 KRRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVC-----G 77 (291)
T ss_pred chHHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEE-----c
Confidence 3567899999999999999999742 3456888888765555557788999999999999999999985 3
Q ss_pred CCceEEEEEecCCCCChhhhccCCCCCc---------ccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCE
Q 005045 461 GNDFKALVFEFMSNGNLDQWLHPSPAEH---------YQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNV 531 (717)
Q Consensus 461 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~---------~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NI 531 (717)
..+..++||||+++++|.+++....... .....+++..+++++.||+.|++|||++ +++||||||+||
T Consensus 78 ~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~Ni 154 (291)
T cd05094 78 DGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQ---HFVHRDLATRNC 154 (291)
T ss_pred cCCceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceE
Confidence 4557899999999999999986542110 0114589999999999999999999997 999999999999
Q ss_pred EeCCCCceEEeeeccchhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHh-CCCCCCCC
Q 005045 532 LLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFT-GKRPTGDM 609 (717)
Q Consensus 532 ll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~ellt-g~~p~~~~ 609 (717)
+++.++.++|+|||.+....... .........++..|+|||.+.+ .++.++|||||||++|+|++ |..||...
T Consensus 155 l~~~~~~~~l~dfg~a~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~ 229 (291)
T cd05094 155 LVGANLLVKIGDFGMSRDVYSTD-----YYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQL 229 (291)
T ss_pred EEccCCcEEECCCCcccccCCCc-----eeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 99999999999999987542111 1111223446788999999654 57899999999999999999 99998654
Q ss_pred CCCchhhhHHHHhcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCc
Q 005045 610 FKDDFSIHMFVSMALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSP 689 (717)
Q Consensus 610 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p 689 (717)
.... ..... ....... ....++..+.+++.+||+.+|
T Consensus 230 ~~~~--~~~~~-----------~~~~~~~------------------------------~~~~~~~~~~~li~~~l~~~P 266 (291)
T cd05094 230 SNTE--VIECI-----------TQGRVLE------------------------------RPRVCPKEVYDIMLGCWQREP 266 (291)
T ss_pred CHHH--HHHHH-----------hCCCCCC------------------------------CCccCCHHHHHHHHHHcccCh
Confidence 3221 10000 0000000 011125568899999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHH
Q 005045 690 RERIAMNVVVNNLKTIRNCF 709 (717)
Q Consensus 690 ~~Rps~~eil~~l~~i~~~~ 709 (717)
++|||+++|++.|+++....
T Consensus 267 ~~Rpt~~~v~~~l~~~~~~~ 286 (291)
T cd05094 267 QQRLNIKEIYKILHALGKAT 286 (291)
T ss_pred hhCcCHHHHHHHHHHHHhhc
Confidence 99999999999999997643
No 87
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=6.9e-36 Score=316.41 Aligned_cols=251 Identities=25% Similarity=0.413 Sum_probs=192.1
Q ss_pred cccccccccccccCcccccceEEEEeC-CCchhhhHHhHhhh-hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCC
Q 005045 385 SKSTDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQ-QGALKSFIDECNALKSTRHRNILRVITACSSVDLEGN 462 (717)
Q Consensus 385 ~~~~~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~ 462 (717)
.....+|+..++||+|+||.||+|++. +++.||+|++.... ......+.+|+++++.++|+||+++++++ ...
T Consensus 70 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~ 144 (353)
T PLN00034 70 AKSLSELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMF-----DHN 144 (353)
T ss_pred CCCHHHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEe-----ccC
Confidence 334568899999999999999999965 78999999986432 33456788999999999999999999984 455
Q ss_pred ceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEe
Q 005045 463 DFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVG 542 (717)
Q Consensus 463 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~ 542 (717)
+..++||||+++++|.+.. ...+..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 145 ~~~~lv~e~~~~~~L~~~~-----------~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~ 210 (353)
T PLN00034 145 GEIQVLLEFMDGGSLEGTH-----------IADEQFLADVARQILSGIAYLHRR---HIVHRDIKPSNLLINSAKNVKIA 210 (353)
T ss_pred CeEEEEEecCCCCcccccc-----------cCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEc
Confidence 6899999999999886532 345677889999999999999998 99999999999999999999999
Q ss_pred eeccchhcccccCCCCCCcceeecccccccccCCCccCC-----C-CCcccchhhHHHHHHHHHhCCCCCCCCCCCchhh
Q 005045 543 DFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-----Q-VSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSI 616 (717)
Q Consensus 543 Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-----~-~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~ 616 (717)
|||.+....... .......|+..|+|||++.. . .+.++|||||||++|||++|+.||......+.
T Consensus 211 DfG~~~~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~-- 281 (353)
T PLN00034 211 DFGVSRILAQTM-------DPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDW-- 281 (353)
T ss_pred ccccceeccccc-------ccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccH--
Confidence 999987652111 11123468999999998642 2 35789999999999999999999973321111
Q ss_pred hHHHHhcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHH
Q 005045 617 HMFVSMALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMN 696 (717)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ 696 (717)
..... ...... . ......++..+.+++.+||+.+|++|||+.
T Consensus 282 ~~~~~--------~~~~~~-~-----------------------------~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ 323 (353)
T PLN00034 282 ASLMC--------AICMSQ-P-----------------------------PEAPATASREFRHFISCCLQREPAKRWSAM 323 (353)
T ss_pred HHHHH--------HHhccC-C-----------------------------CCCCCccCHHHHHHHHHHccCChhhCcCHH
Confidence 00000 000000 0 001122356788999999999999999999
Q ss_pred HHHHH
Q 005045 697 VVVNN 701 (717)
Q Consensus 697 eil~~ 701 (717)
|+++.
T Consensus 324 ell~h 328 (353)
T PLN00034 324 QLLQH 328 (353)
T ss_pred HHhcC
Confidence 99874
No 88
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=5.3e-36 Score=312.57 Aligned_cols=258 Identities=25% Similarity=0.412 Sum_probs=199.1
Q ss_pred ccccccccccCcccccceEEEEeC-CCc----hhhhHHhHhhh-hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCC
Q 005045 388 TDNFSKENLIGTGSFGSVYKGTLG-DGT----IVAIKVLKLQQ-QGALKSFIDECNALKSTRHRNILRVITACSSVDLEG 461 (717)
Q Consensus 388 ~~~y~~~~~ig~g~~g~v~~~~~~-~~~----~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~ 461 (717)
..+|++.+.||+|+||.||+|.+. +++ .||+|.+.... ....+.+.+|+.+++.++||||+++++++..
T Consensus 6 ~~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~----- 80 (316)
T cd05108 6 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT----- 80 (316)
T ss_pred hhhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcC-----
Confidence 457999999999999999999854 344 38999886442 3445778899999999999999999998743
Q ss_pred CceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEE
Q 005045 462 NDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHV 541 (717)
Q Consensus 462 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl 541 (717)
...++++||+++|+|.+++.... ..+++..++.++.||+.||+|||+. +++||||||+||+++.++.+||
T Consensus 81 -~~~~~v~e~~~~g~l~~~l~~~~------~~~~~~~~~~~~~qi~~~L~~LH~~---~iiH~dlkp~Nill~~~~~~kl 150 (316)
T cd05108 81 -STVQLITQLMPFGCLLDYVREHK------DNIGSQYLLNWCVQIAKGMNYLEER---RLVHRDLAARNVLVKTPQHVKI 150 (316)
T ss_pred -CCceeeeecCCCCCHHHHHHhcc------ccCCHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEecCCCcEEE
Confidence 24679999999999999987543 4578899999999999999999997 9999999999999999999999
Q ss_pred eeeccchhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHh-CCCCCCCCCCCchhhhHH
Q 005045 542 GDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFT-GKRPTGDMFKDDFSIHMF 619 (717)
Q Consensus 542 ~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~ 619 (717)
+|||.++...... .........++..|+|||.+.+ .++.++|||||||++|||++ |..||.+..... ....
T Consensus 151 ~DfG~a~~~~~~~-----~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~--~~~~ 223 (316)
T cd05108 151 TDFGLAKLLGADE-----KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE--ISSI 223 (316)
T ss_pred ccccccccccCCC-----cceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHH--HHHH
Confidence 9999998652111 1111122234668999999654 58999999999999999998 999986542211 1111
Q ss_pred HHhcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHH
Q 005045 620 VSMALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVV 699 (717)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil 699 (717)
. ...... ..+..++..+.+++.+||+.+|++|||+.+++
T Consensus 224 ~------------~~~~~~-----------------------------~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~ 262 (316)
T cd05108 224 L------------EKGERL-----------------------------PQPPICTIDVYMIMVKCWMIDADSRPKFRELI 262 (316)
T ss_pred H------------hCCCCC-----------------------------CCCCCCCHHHHHHHHHHccCChhhCcCHHHHH
Confidence 1 000000 00112245678899999999999999999999
Q ss_pred HHHHHHHHH
Q 005045 700 NNLKTIRNC 708 (717)
Q Consensus 700 ~~l~~i~~~ 708 (717)
+.+..+...
T Consensus 263 ~~l~~~~~~ 271 (316)
T cd05108 263 IEFSKMARD 271 (316)
T ss_pred HHHHHHHcC
Confidence 999888754
No 89
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=4.7e-36 Score=329.06 Aligned_cols=254 Identities=20% Similarity=0.260 Sum_probs=197.2
Q ss_pred ccccccccccCcccccceEEEEeC-C-CchhhhHHhHhhhhhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceE
Q 005045 388 TDNFSKENLIGTGSFGSVYKGTLG-D-GTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFK 465 (717)
Q Consensus 388 ~~~y~~~~~ig~g~~g~v~~~~~~-~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~ 465 (717)
...|.+.+.+|+|++|.||.|... + ++.||+|.+..........+..|+.+++.++||||+++++.+. ..+..
T Consensus 66 ~~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~-----~~~~~ 140 (478)
T PTZ00267 66 EHMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFK-----SDDKL 140 (478)
T ss_pred ceeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEE-----ECCEE
Confidence 445999999999999999999854 4 6778888776555555567888999999999999999999953 45689
Q ss_pred EEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeec
Q 005045 466 ALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFG 545 (717)
Q Consensus 466 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg 545 (717)
|+||||+++++|.+++..... ....+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 141 ~lv~E~~~gg~L~~~l~~~~~---~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~~~~~~kL~DFg 214 (478)
T PTZ00267 141 LLIMEYGSGGDLNKQIKQRLK---EHLPFQEYEVGLLFYQIVLALDEVHSR---KMMHRDLKSANIFLMPTGIIKLGDFG 214 (478)
T ss_pred EEEEECCCCCCHHHHHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCcCHHhEEECCCCcEEEEeCc
Confidence 999999999999988753211 114588999999999999999999997 99999999999999999999999999
Q ss_pred cchhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHHHhcC
Q 005045 546 LAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVSMAL 624 (717)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~ 624 (717)
++....... .........||+.|+|||++.+ .++.++|||||||++|+|++|..||....... .
T Consensus 215 la~~~~~~~-----~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~--~-------- 279 (478)
T PTZ00267 215 FSKQYSDSV-----SLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQRE--I-------- 279 (478)
T ss_pred CceecCCcc-----ccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHH--H--------
Confidence 998652111 1112234568999999999755 48999999999999999999999996532110 0
Q ss_pred ChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHH
Q 005045 625 PDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVN 700 (717)
Q Consensus 625 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~ 700 (717)
+..+....... .+..++..+.+++.+||+.+|++|||+.++++
T Consensus 280 ---~~~~~~~~~~~------------------------------~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~ 322 (478)
T PTZ00267 280 ---MQQVLYGKYDP------------------------------FPCPVSSGMKALLDPLLSKNPALRPTTQQLLH 322 (478)
T ss_pred ---HHHHHhCCCCC------------------------------CCccCCHHHHHHHHHHhccChhhCcCHHHHHh
Confidence 00111100000 00112456788999999999999999999975
No 90
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=1.1e-35 Score=301.40 Aligned_cols=255 Identities=29% Similarity=0.467 Sum_probs=198.5
Q ss_pred cccccccccccCcccccceEEEEeCCCchhhhHHhHhhhhhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceEE
Q 005045 387 STDNFSKENLIGTGSFGSVYKGTLGDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFKA 466 (717)
Q Consensus 387 ~~~~y~~~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~ 466 (717)
..++|++.++||+|++|.||.|.+.++..||+|.+..... ....+.+|+++++.++|+||+++++.+. ....+
T Consensus 4 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~------~~~~~ 76 (262)
T cd05071 4 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVS------EEPIY 76 (262)
T ss_pred ChHHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCcc-CHHHHHHHHHHHHhCCCCCcceEEEEEC------CCCcE
Confidence 4578999999999999999999977666799999875332 2357889999999999999999988742 23579
Q ss_pred EEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeecc
Q 005045 467 LVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGL 546 (717)
Q Consensus 467 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~ 546 (717)
+||||+++++|.+++..... ..+++..+..++.|++.||+|+|+. +++||||+|+||+++.++.++|+|||.
T Consensus 77 lv~e~~~~~~L~~~~~~~~~-----~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~Nill~~~~~~~L~dfg~ 148 (262)
T cd05071 77 IVTEYMSKGSLLDFLKGEMG-----KYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGL 148 (262)
T ss_pred EEEEcCCCCcHHHHHhhccc-----cCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcccEEEcCCCcEEeccCCc
Confidence 99999999999999975421 4578999999999999999999997 999999999999999999999999999
Q ss_pred chhcccccCCCCCCcceeecccccccccCCCccC-CCCCcccchhhHHHHHHHHHh-CCCCCCCCCCCchhhhHHHHhcC
Q 005045 547 AKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMN-GQVSILGDIYSYGILLLEMFT-GKRPTGDMFKDDFSIHMFVSMAL 624 (717)
Q Consensus 547 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 624 (717)
+....... ........++..|+|||... +.++.++|||||||++|+|++ |..||........ . ..
T Consensus 149 ~~~~~~~~------~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~-~-~~----- 215 (262)
T cd05071 149 ARLIEDNE------YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV-L-DQ----- 215 (262)
T ss_pred eeeccccc------cccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHH-H-HH-----
Confidence 87652111 11112234567899999964 468999999999999999999 8888865422110 0 00
Q ss_pred ChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHHHHHH
Q 005045 625 PDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVNNLKT 704 (717)
Q Consensus 625 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~~l~~ 704 (717)
+...... ....+++..+.+++.+|++.+|++|||++++++.|+.
T Consensus 216 -------~~~~~~~-----------------------------~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~ 259 (262)
T cd05071 216 -------VERGYRM-----------------------------PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLED 259 (262)
T ss_pred -------HhcCCCC-----------------------------CCccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHH
Confidence 0000000 0112235678899999999999999999999999886
Q ss_pred H
Q 005045 705 I 705 (717)
Q Consensus 705 i 705 (717)
.
T Consensus 260 ~ 260 (262)
T cd05071 260 Y 260 (262)
T ss_pred h
Confidence 4
No 91
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=8e-37 Score=278.83 Aligned_cols=249 Identities=26% Similarity=0.371 Sum_probs=205.1
Q ss_pred cccccccccccCcccccceEEEE-eCCCchhhhHHhHhhh---hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCC
Q 005045 387 STDNFSKENLIGTGSFGSVYKGT-LGDGTIVAIKVLKLQQ---QGALKSFIDECNALKSTRHRNILRVITACSSVDLEGN 462 (717)
Q Consensus 387 ~~~~y~~~~~ig~g~~g~v~~~~-~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~ 462 (717)
+.++|.+.+.+|+|.||.||.|+ .+++-.||+|++.... ......+.+|++|-..++||||+++|++ +-+.
T Consensus 20 ~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~-----fhd~ 94 (281)
T KOG0580|consen 20 TLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGY-----FHDS 94 (281)
T ss_pred chhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhh-----eecc
Confidence 45689999999999999999999 4588889999987553 3345778899999999999999999999 5566
Q ss_pred ceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEe
Q 005045 463 DFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVG 542 (717)
Q Consensus 463 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~ 542 (717)
...|+++||.++|.++..+..+. ..++++.....++.|+|.|+.|+|.. .|+||||||+|++++..|..||+
T Consensus 95 ~riyLilEya~~gel~k~L~~~~-----~~~f~e~~~a~Yi~q~A~Al~y~h~k---~VIhRdiKpenlLlg~~~~lkiA 166 (281)
T KOG0580|consen 95 KRIYLILEYAPRGELYKDLQEGR-----MKRFDEQRAATYIKQLANALLYCHLK---RVIHRDIKPENLLLGSAGELKIA 166 (281)
T ss_pred ceeEEEEEecCCchHHHHHHhcc-----cccccccchhHHHHHHHHHHHHhccC---CcccCCCCHHHhccCCCCCeecc
Confidence 79999999999999999888543 26788999999999999999999996 99999999999999999999999
Q ss_pred eeccchhcccccCCCCCCcceeecccccccccCCCccCCC-CCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHHH
Q 005045 543 DFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNGQ-VSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVS 621 (717)
Q Consensus 543 Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~ 621 (717)
|||.+... +.......+||..|.|||..++. ++..+|+|++|+..||++.|.+||.... .+..+.+...
T Consensus 167 dfGwsV~~---------p~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~-~~etYkrI~k 236 (281)
T KOG0580|consen 167 DFGWSVHA---------PSNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQS-HSETYKRIRK 236 (281)
T ss_pred CCCceeec---------CCCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhh-hHHHHHHHHH
Confidence 99998753 35566778899999999998876 7999999999999999999999997653 1111111111
Q ss_pred hcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHHH
Q 005045 622 MALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVNN 701 (717)
Q Consensus 622 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~~ 701 (717)
. ++..| ...+....++|++|+..+|.+|.+..|+++.
T Consensus 237 ~-------~~~~p------------------------------------~~is~~a~dlI~~ll~~~p~~r~~l~~v~~h 273 (281)
T KOG0580|consen 237 V-------DLKFP------------------------------------STISGGAADLISRLLVKNPIERLALTEVMDH 273 (281)
T ss_pred c-------cccCC------------------------------------cccChhHHHHHHHHhccCccccccHHHHhhh
Confidence 0 00111 1114456789999999999999999999864
No 92
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=7.2e-36 Score=305.68 Aligned_cols=263 Identities=22% Similarity=0.414 Sum_probs=197.5
Q ss_pred cccccccccccccCcccccceEEEEeC------CCchhhhHHhHhhh-hhHHHHHHHHHHHHhcCCCCceeEEEEeeccc
Q 005045 385 SKSTDNFSKENLIGTGSFGSVYKGTLG------DGTIVAIKVLKLQQ-QGALKSFIDECNALKSTRHRNILRVITACSSV 457 (717)
Q Consensus 385 ~~~~~~y~~~~~ig~g~~g~v~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~ 457 (717)
....++|++.+.||+|++|.||.|.++ .++.||+|.+.... ......+.+|+.+++.++||||+++++.+
T Consensus 2 ~~~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~--- 78 (277)
T cd05062 2 EVAREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVV--- 78 (277)
T ss_pred cccHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEE---
Confidence 346789999999999999999998743 35679999876432 23345688999999999999999999985
Q ss_pred cCCCCceEEEEEecCCCCChhhhccCCCCCc---ccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeC
Q 005045 458 DLEGNDFKALVFEFMSNGNLDQWLHPSPAEH---YQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLD 534 (717)
Q Consensus 458 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~---~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~ 534 (717)
......++||||+++++|.+++....... ......++..+..++.|++.|++|||+. +++||||||+||+++
T Consensus 79 --~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~vH~dlkp~Nil~~ 153 (277)
T cd05062 79 --SQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVA 153 (277)
T ss_pred --cCCCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCcchheEEEc
Confidence 34558899999999999999986532110 0113467888999999999999999997 999999999999999
Q ss_pred CCCceEEeeeccchhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHh-CCCCCCCCCCC
Q 005045 535 KDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFT-GKRPTGDMFKD 612 (717)
Q Consensus 535 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~ 612 (717)
.++.++|+|||.+........ ........++..|+|||.+.+ .++.++|||||||++|+|++ |..||......
T Consensus 154 ~~~~~~l~dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~ 228 (277)
T cd05062 154 EDFTVKIGDFGMTRDIYETDY-----YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNE 228 (277)
T ss_pred CCCCEEECCCCCccccCCcce-----eecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHH
Confidence 999999999999875421111 111112235678999999654 58999999999999999999 78888654221
Q ss_pred chhhhHHHHhcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCC
Q 005045 613 DFSIHMFVSMALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRER 692 (717)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~R 692 (717)
. .... ........ .+..++..+.+++.+|++.+|++|
T Consensus 229 ~--~~~~-----------~~~~~~~~------------------------------~~~~~~~~~~~li~~~l~~~p~~R 265 (277)
T cd05062 229 Q--VLRF-----------VMEGGLLD------------------------------KPDNCPDMLFELMRMCWQYNPKMR 265 (277)
T ss_pred H--HHHH-----------HHcCCcCC------------------------------CCCCCCHHHHHHHHHHcCCChhhC
Confidence 1 1000 00000000 011225568899999999999999
Q ss_pred CCHHHHHHHHH
Q 005045 693 IAMNVVVNNLK 703 (717)
Q Consensus 693 ps~~eil~~l~ 703 (717)
||+.|+++.++
T Consensus 266 ps~~e~l~~l~ 276 (277)
T cd05062 266 PSFLEIISSIK 276 (277)
T ss_pred cCHHHHHHHhh
Confidence 99999999876
No 93
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.4e-37 Score=316.49 Aligned_cols=243 Identities=25% Similarity=0.418 Sum_probs=199.8
Q ss_pred ccCcccccceEEEEeC-CCchhhhHHhHhhhhhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceEEEEEecCCC
Q 005045 396 LIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSN 474 (717)
Q Consensus 396 ~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~lv~e~~~~ 474 (717)
++|+|.||+||.|++. +...+|||.+...+.+..+-+.+|+...++++|.|||++++. +.++++.-|.||.+||
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs-----~senGf~kIFMEqVPG 656 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGS-----VSENGFFKIFMEQVPG 656 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhc-----cCCCCeEEEEeecCCC
Confidence 5899999999999966 667799999988777777888999999999999999999999 5566799999999999
Q ss_pred CChhhhccCCCCCccccccc--CHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeC-CCCceEEeeeccchhcc
Q 005045 475 GNLDQWLHPSPAEHYQFKKL--SVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLD-KDMTAHVGDFGLAKFLF 551 (717)
Q Consensus 475 ~~L~~~l~~~~~~~~~~~~~--~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~-~~~~~kl~Dfg~~~~~~ 551 (717)
|+|.+.++.. ++.+ .+..+-.+.+||++||.|||++ .|||||||-+||+|+ ..|.+||+|||-++++
T Consensus 657 GSLSsLLrsk------WGPlKDNEstm~fYtkQILeGLkYLHen---~IVHRDIKGDNVLvNTySGvlKISDFGTsKRL- 726 (1226)
T KOG4279|consen 657 GSLSSLLRSK------WGPLKDNESTMNFYTKQILEGLKYLHEN---KIVHRDIKGDNVLVNTYSGVLKISDFGTSKRL- 726 (1226)
T ss_pred CcHHHHHHhc------cCCCccchhHHHHHHHHHHHHhhhhhhc---ceeeccccCCcEEEeeccceEEecccccchhh-
Confidence 9999999743 2455 7888889999999999999998 999999999999996 6899999999999887
Q ss_pred cccCCCCCCcceeecccccccccCCCccC-C--CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHHHhcCChhh
Q 005045 552 EISDNPSKNQTVSIGLKGSIGYIPPEHMN-G--QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVSMALPDHV 628 (717)
Q Consensus 552 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~-~--~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 628 (717)
..-......+.||..|||||++. | .|+.++|||||||++.||-||++||............ ++.
T Consensus 727 ------AginP~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFk-VGm------ 793 (1226)
T KOG4279|consen 727 ------AGINPCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFK-VGM------ 793 (1226)
T ss_pred ------ccCCccccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhhh-hcc------
Confidence 34455666788999999999974 3 3899999999999999999999999876433221110 000
Q ss_pred hhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHH
Q 005045 629 MDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVN 700 (717)
Q Consensus 629 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~ 700 (717)
-+ ..|. .+++-+.+...||.+|+.++|.+||+|+++++
T Consensus 794 yK-vHP~---------------------------------iPeelsaeak~FilrcFepd~~~R~sA~~LL~ 831 (1226)
T KOG4279|consen 794 YK-VHPP---------------------------------IPEELSAEAKNFILRCFEPDPCDRPSAKDLLQ 831 (1226)
T ss_pred ee-cCCC---------------------------------CcHHHHHHHHHHHHHHcCCCcccCccHHHhcc
Confidence 00 0111 22334556688999999999999999999985
No 94
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=8.9e-36 Score=311.48 Aligned_cols=241 Identities=27% Similarity=0.331 Sum_probs=187.9
Q ss_pred ccccCcccccceEEEEe----CCCchhhhHHhHhhh----hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceE
Q 005045 394 ENLIGTGSFGSVYKGTL----GDGTIVAIKVLKLQQ----QGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFK 465 (717)
Q Consensus 394 ~~~ig~g~~g~v~~~~~----~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~ 465 (717)
++.||+|+||.||+++. .+++.||+|++.... ......+..|+++++.++||||+++++.+ ..++..
T Consensus 1 ~~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~-----~~~~~~ 75 (323)
T cd05584 1 LKVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAF-----QTGGKL 75 (323)
T ss_pred CceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEE-----ecCCeE
Confidence 36799999999999984 267889999886432 22345678899999999999999999884 445689
Q ss_pred EEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeec
Q 005045 466 ALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFG 545 (717)
Q Consensus 466 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg 545 (717)
|+||||+++++|.+++... ..+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 76 ~lv~e~~~~~~L~~~~~~~-------~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg 145 (323)
T cd05584 76 YLILEYLSGGELFMHLERE-------GIFMEDTACFYLSEISLALEHLHQQ---GIIYRDLKPENILLDAQGHVKLTDFG 145 (323)
T ss_pred EEEEeCCCCchHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEeeCc
Confidence 9999999999999998754 5578889999999999999999998 99999999999999999999999999
Q ss_pred cchhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHHHhcC
Q 005045 546 LAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVSMAL 624 (717)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~ 624 (717)
++...... ........|++.|+|||++.+ .++.++|||||||++|||++|..||.......
T Consensus 146 ~~~~~~~~-------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~----------- 207 (323)
T cd05584 146 LCKESIHE-------GTVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKK----------- 207 (323)
T ss_pred CCeecccC-------CCcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHH-----------
Confidence 98643111 111223468999999999765 47899999999999999999999996532110
Q ss_pred ChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCC-----CHHHHH
Q 005045 625 PDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERI-----AMNVVV 699 (717)
Q Consensus 625 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp-----s~~eil 699 (717)
.+..+....... +...+..+.+++.+|++.+|++|| ++.+++
T Consensus 208 --~~~~~~~~~~~~-------------------------------~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~ 254 (323)
T cd05584 208 --TIDKILKGKLNL-------------------------------PPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQ 254 (323)
T ss_pred --HHHHHHcCCCCC-------------------------------CCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHh
Confidence 011111111110 111245678899999999999999 788877
Q ss_pred H
Q 005045 700 N 700 (717)
Q Consensus 700 ~ 700 (717)
+
T Consensus 255 ~ 255 (323)
T cd05584 255 S 255 (323)
T ss_pred c
Confidence 5
No 95
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=5.2e-36 Score=305.00 Aligned_cols=255 Identities=21% Similarity=0.318 Sum_probs=197.4
Q ss_pred cccccccccccCcccccceEEEEeC-CCchhhhHHhHhhhhhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceE
Q 005045 387 STDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFK 465 (717)
Q Consensus 387 ~~~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~ 465 (717)
..++|++.+.||+|++|.||+|... +++.||+|++..........+.+|+.++++++||||+++++.+. ..+..
T Consensus 7 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~-----~~~~~ 81 (267)
T cd06646 7 PQHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYL-----SREKL 81 (267)
T ss_pred chhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEE-----eCCEE
Confidence 3458999999999999999999964 78899999987554444567888999999999999999999853 34588
Q ss_pred EEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeec
Q 005045 466 ALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFG 545 (717)
Q Consensus 466 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg 545 (717)
++||||+++++|.+++... ..+++..+..++.|++.|++|||+. +++||||+|+||+++.++.++|+|||
T Consensus 82 ~iv~e~~~~~~L~~~~~~~-------~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg 151 (267)
T cd06646 82 WICMEYCGGGSLQDIYHVT-------GPLSELQIAYVCRETLQGLAYLHSK---GKMHRDIKGANILLTDNGDVKLADFG 151 (267)
T ss_pred EEEEeCCCCCcHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEECcCc
Confidence 9999999999999988644 4578999999999999999999997 99999999999999999999999999
Q ss_pred cchhcccccCCCCCCcceeecccccccccCCCccC----CCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHHH
Q 005045 546 LAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMN----GQVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVS 621 (717)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~----~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~ 621 (717)
.+...... ........++..|+|||.+. +.++.++||||+||++|+|++|..||....+.....
T Consensus 152 ~~~~~~~~-------~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~----- 219 (267)
T cd06646 152 VAAKITAT-------IAKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALF----- 219 (267)
T ss_pred cceeeccc-------ccccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhhe-----
Confidence 98765211 11112345788999999863 236789999999999999999999986542211100
Q ss_pred hcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHHH
Q 005045 622 MALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVNN 701 (717)
Q Consensus 622 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~~ 701 (717)
.+......... .......+..+.+++.+||+.+|++|||+++|++.
T Consensus 220 --------~~~~~~~~~~~--------------------------~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 265 (267)
T cd06646 220 --------LMSKSNFQPPK--------------------------LKDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTH 265 (267)
T ss_pred --------eeecCCCCCCC--------------------------CccccccCHHHHHHHHHHhhCChhhCcCHHHHhcC
Confidence 00000000000 00001124567899999999999999999999875
Q ss_pred H
Q 005045 702 L 702 (717)
Q Consensus 702 l 702 (717)
+
T Consensus 266 l 266 (267)
T cd06646 266 L 266 (267)
T ss_pred C
Confidence 3
No 96
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=3.3e-36 Score=319.21 Aligned_cols=255 Identities=23% Similarity=0.358 Sum_probs=198.7
Q ss_pred cccccccccCcccccceEEEEeC-CCchhhhHHhHhhh---hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCce
Q 005045 389 DNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQ---QGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDF 464 (717)
Q Consensus 389 ~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 464 (717)
++|++.+.||+|+||.||+|.+. +++.||+|++.... ......+..|+++++.++|+||+++++. +.+++.
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~-----~~~~~~ 75 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYS-----FQDEEH 75 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhh-----eecCCe
Confidence 47999999999999999999965 79999999987542 2345678899999999999999999988 445668
Q ss_pred EEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeee
Q 005045 465 KALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDF 544 (717)
Q Consensus 465 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Df 544 (717)
.++||||+++++|.+++... ..+++..++.++.||+.||+|||+. ||+||||||+||+++.++.+||+||
T Consensus 76 ~~lv~e~~~~~~L~~~l~~~-------~~l~~~~~~~i~~qi~~aL~~LH~~---giiH~Dlkp~NIll~~~~~~kL~Df 145 (350)
T cd05573 76 LYLVMEYMPGGDLMNLLIRK-------DVFPEETARFYIAELVLALDSVHKL---GFIHRDIKPDNILIDADGHIKLADF 145 (350)
T ss_pred EEEEEcCCCCCCHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEeecC
Confidence 99999999999999998754 4689999999999999999999997 9999999999999999999999999
Q ss_pred ccchhcccccCC----------------------CCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHh
Q 005045 545 GLAKFLFEISDN----------------------PSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFT 601 (717)
Q Consensus 545 g~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~ellt 601 (717)
|.+......... ............|++.|+|||++.+ .++.++|||||||++|+|++
T Consensus 146 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~ 225 (350)
T cd05573 146 GLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLY 225 (350)
T ss_pred CCCccCcccCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhcc
Confidence 998765322100 0000112234568999999999765 48999999999999999999
Q ss_pred CCCCCCCCCCCchhhhHHHHhcCChhhhhhcC--CCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHH
Q 005045 602 GKRPTGDMFKDDFSIHMFVSMALPDHVMDILD--PSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLR 679 (717)
Q Consensus 602 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 679 (717)
|..||........ . ..+.. ....... ...++..+.+
T Consensus 226 g~~Pf~~~~~~~~-~------------~~i~~~~~~~~~p~-----------------------------~~~~~~~~~~ 263 (350)
T cd05573 226 GFPPFYSDTLQET-Y------------NKIINWKESLRFPP-----------------------------DPPVSPEAID 263 (350)
T ss_pred CCCCCCCCCHHHH-H------------HHHhccCCcccCCC-----------------------------CCCCCHHHHH
Confidence 9999976431110 0 00000 0000000 0012556788
Q ss_pred HhhccCCCCcCCCCC-HHHHHHH
Q 005045 680 IGLMCSTTSPRERIA-MNVVVNN 701 (717)
Q Consensus 680 li~~cl~~~p~~Rps-~~eil~~ 701 (717)
++.+|++ +|++||+ ++|+++.
T Consensus 264 li~~ll~-dp~~R~~s~~~ll~h 285 (350)
T cd05573 264 LICRLLC-DPEDRLGSFEEIKSH 285 (350)
T ss_pred HHHHHcc-ChhhcCCCHHHHhcC
Confidence 9999998 9999999 9999874
No 97
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=9.4e-36 Score=301.02 Aligned_cols=251 Identities=27% Similarity=0.445 Sum_probs=195.3
Q ss_pred ccccccccccCcccccceEEEEeCCCchhhhHHhHhhhhhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceEEE
Q 005045 388 TDNFSKENLIGTGSFGSVYKGTLGDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFKAL 467 (717)
Q Consensus 388 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~l 467 (717)
..+|++.+.||+|++|.||+|.+++++.+|+|++..... ....+.+|+++++.++||||+++++.+ ...+..++
T Consensus 3 ~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~~~~~l 76 (256)
T cd05059 3 PSELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAM-SEDDFIEEAKVMMKLSHPNLVQLYGVC-----TKQRPIFI 76 (256)
T ss_pred hHHcchhhhhccCCCceEEEeEecCCccEEEEEeccCCC-CHHHHHHHHHHHHhCCCCCEEEEEEEE-----cCCCceEE
Confidence 457899999999999999999987777899998764322 234677899999999999999999985 34457899
Q ss_pred EEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeeccc
Q 005045 468 VFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLA 547 (717)
Q Consensus 468 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~ 547 (717)
||||+++++|.+++.... ..+++..+..++.||+.|++|||+. +++||||||+||+++.++.+||+|||.+
T Consensus 77 v~e~~~~~~L~~~l~~~~------~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~dfg~~ 147 (256)
T cd05059 77 VTEYMANGCLLNYLRERK------GKLGTEWLLDMCSDVCEAMEYLESN---GFIHRDLAARNCLVGEDNVVKVSDFGLA 147 (256)
T ss_pred EEecCCCCCHHHHHHhcc------cCCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHhhEEECCCCcEEECCcccc
Confidence 999999999999987542 4689999999999999999999998 9999999999999999999999999998
Q ss_pred hhcccccCCCCCCcceeecccccccccCCCccC-CCCCcccchhhHHHHHHHHHh-CCCCCCCCCCCchhhhHHHHhcCC
Q 005045 548 KFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMN-GQVSILGDIYSYGILLLEMFT-GKRPTGDMFKDDFSIHMFVSMALP 625 (717)
Q Consensus 548 ~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 625 (717)
+...... ........++..|+|||.+. +.++.++|||||||++|+|++ |..||......+ ........
T Consensus 148 ~~~~~~~------~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~--~~~~~~~~-- 217 (256)
T cd05059 148 RYVLDDQ------YTSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSE--VVESVSAG-- 217 (256)
T ss_pred eeccccc------ccccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHH--HHHHHHcC--
Confidence 7542110 01111122345799999965 458999999999999999999 899986542211 11111000
Q ss_pred hhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHHHH
Q 005045 626 DHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVNNL 702 (717)
Q Consensus 626 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~~l 702 (717)
.... .+..++.++.+++.+||+.+|++|||+.|+++.|
T Consensus 218 ------~~~~---------------------------------~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 218 ------YRLY---------------------------------RPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred ------CcCC---------------------------------CCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence 0000 0112366789999999999999999999999876
No 98
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=1.1e-35 Score=312.42 Aligned_cols=199 Identities=26% Similarity=0.390 Sum_probs=166.6
Q ss_pred ccccccccCcccccceEEEEe----CCCchhhhHHhHhhh----hhHHHHHHHHHHHHhcC-CCCceeEEEEeeccccCC
Q 005045 390 NFSKENLIGTGSFGSVYKGTL----GDGTIVAIKVLKLQQ----QGALKSFIDECNALKST-RHRNILRVITACSSVDLE 460 (717)
Q Consensus 390 ~y~~~~~ig~g~~g~v~~~~~----~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~~~~ 460 (717)
+|++.+.||+|+||.||+++. .+++.||+|++.... ....+.+..|+++++.+ .|++|+++++. +.
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~-----~~ 75 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYA-----FQ 75 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEE-----Ee
Confidence 588999999999999999884 267889999886432 23346678899999999 59999999888 44
Q ss_pred CCceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceE
Q 005045 461 GNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAH 540 (717)
Q Consensus 461 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~k 540 (717)
..+..++||||+++++|.+++... ..+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+|
T Consensus 76 ~~~~~~lv~e~~~~g~L~~~l~~~-------~~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nili~~~~~~k 145 (332)
T cd05614 76 TEAKLHLILDYVSGGEMFTHLYQR-------DNFSEDEVRFYSGEIILALEHLHKL---GIVYRDIKLENILLDSEGHVV 145 (332)
T ss_pred cCCEEEEEEeCCCCCcHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHeEECCCCCEE
Confidence 556899999999999999998754 5689999999999999999999997 999999999999999999999
Q ss_pred EeeeccchhcccccCCCCCCcceeecccccccccCCCccCCC--CCcccchhhHHHHHHHHHhCCCCCCCC
Q 005045 541 VGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNGQ--VSILGDIYSYGILLLEMFTGKRPTGDM 609 (717)
Q Consensus 541 l~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~sDvwslG~vl~elltg~~p~~~~ 609 (717)
|+|||++....... ........|+..|+|||++.+. ++.++|||||||++|+|++|..||...
T Consensus 146 l~DfG~~~~~~~~~------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~ 210 (332)
T cd05614 146 LTDFGLSKEFLSEE------KERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLE 210 (332)
T ss_pred EeeCcCCccccccC------CCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCC
Confidence 99999987542111 1112235689999999997653 688999999999999999999999653
No 99
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=1.2e-35 Score=305.96 Aligned_cols=274 Identities=24% Similarity=0.325 Sum_probs=193.8
Q ss_pred ccccccccCcccccceEEEEeC-CCchhhhHHhHhhh--hhHHHHHHHHHHHHhcC---CCCceeEEEEeeccccCCCCc
Q 005045 390 NFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQ--QGALKSFIDECNALKST---RHRNILRVITACSSVDLEGND 463 (717)
Q Consensus 390 ~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l---~h~ni~~~~~~~~~~~~~~~~ 463 (717)
+|++.+.||+|++|.||+|.++ +++.||+|.+.... ......+.+|+++++.+ +||||+++++++.........
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 5899999999999999999965 78899999886432 12223455677766655 799999999987654444456
Q ss_pred eEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEee
Q 005045 464 FKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGD 543 (717)
Q Consensus 464 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~D 543 (717)
..++||||++ +++.+++..... ..+++..+..++.||+.||+|||+. +++||||||+||+++.++.+||+|
T Consensus 81 ~~~lv~e~~~-~~l~~~~~~~~~-----~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~kl~d 151 (288)
T cd07863 81 KVTLVFEHVD-QDLRTYLDKVPP-----PGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGQVKLAD 151 (288)
T ss_pred eEEEEEcccc-cCHHHHHHhcCC-----CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECc
Confidence 7899999996 588888865421 4589999999999999999999998 999999999999999999999999
Q ss_pred eccchhcccccCCCCCCcceeecccccccccCCCccC-CCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHHH-
Q 005045 544 FGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMN-GQVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVS- 621 (717)
Q Consensus 544 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~- 621 (717)
||.+...... .......++..|+|||++. +.++.++||||+||++|+|++|..||......+. ......
T Consensus 152 fg~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~-~~~~~~~ 222 (288)
T cd07863 152 FGLARIYSCQ--------MALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQ-LGKIFDL 222 (288)
T ss_pred cCccccccCc--------ccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHH-HHHHHHH
Confidence 9998765211 1112345788999999964 4589999999999999999999999965432211 111110
Q ss_pred hcCCh--hhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHH
Q 005045 622 MALPD--HVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVV 699 (717)
Q Consensus 622 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil 699 (717)
...+. .+.............. .........++++..+.+++.+|++.||++|||+.|++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l 283 (288)
T cd07863 223 IGLPPEDDWPRDVTLPRGAFSPR-------------------GPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRAL 283 (288)
T ss_pred hCCCChhhCcccccccccccCCC-------------------CCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHh
Confidence 00100 0000000000000000 00000011123456678999999999999999999997
Q ss_pred H
Q 005045 700 N 700 (717)
Q Consensus 700 ~ 700 (717)
.
T Consensus 284 ~ 284 (288)
T cd07863 284 Q 284 (288)
T ss_pred c
Confidence 5
No 100
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=1.2e-35 Score=310.76 Aligned_cols=198 Identities=26% Similarity=0.361 Sum_probs=164.8
Q ss_pred ccccccccCcccccceEEEEeC-CCchhhhHHhHhhh---hhHHHHHHHHHHHHhcCCCC-ceeEEEEeeccccCCCCce
Q 005045 390 NFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQ---QGALKSFIDECNALKSTRHR-NILRVITACSSVDLEGNDF 464 (717)
Q Consensus 390 ~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~-ni~~~~~~~~~~~~~~~~~ 464 (717)
+|++.+.||+|+||.||+|+.+ +++.||+|++.... ......+..|+++++.+.|+ +|+++++++ ...+.
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~-----~~~~~ 75 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCF-----QTMDR 75 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEE-----EcCCE
Confidence 5889999999999999999965 67889999886542 33456778899999999765 577777773 44568
Q ss_pred EEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeee
Q 005045 465 KALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDF 544 (717)
Q Consensus 465 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Df 544 (717)
.|+||||+++++|.+++... ..+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 76 ~~lv~E~~~~g~L~~~~~~~-------~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kL~Df 145 (324)
T cd05587 76 LYFVMEYVNGGDLMYHIQQV-------GKFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDAEGHIKIADF 145 (324)
T ss_pred EEEEEcCCCCCcHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEEcCCCCEEEeec
Confidence 99999999999999988754 4688999999999999999999997 9999999999999999999999999
Q ss_pred ccchhcccccCCCCCCcceeecccccccccCCCccCCC-CCcccchhhHHHHHHHHHhCCCCCCCC
Q 005045 545 GLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNGQ-VSILGDIYSYGILLLEMFTGKRPTGDM 609 (717)
Q Consensus 545 g~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~sDvwslG~vl~elltg~~p~~~~ 609 (717)
|++..... .........|++.|+|||++.+. ++.++||||+||++|+|++|+.||...
T Consensus 146 g~~~~~~~-------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~ 204 (324)
T cd05587 146 GMCKENIF-------GGKTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGE 204 (324)
T ss_pred CcceecCC-------CCCceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCC
Confidence 98864310 11122345689999999997654 789999999999999999999999754
No 101
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=2.5e-35 Score=314.52 Aligned_cols=269 Identities=25% Similarity=0.376 Sum_probs=202.3
Q ss_pred cccccccccccccccCcccccceEEEEeC------CCchhhhHHhHhhh-hhHHHHHHHHHHHHhcCC-CCceeEEEEee
Q 005045 383 DISKSTDNFSKENLIGTGSFGSVYKGTLG------DGTIVAIKVLKLQQ-QGALKSFIDECNALKSTR-HRNILRVITAC 454 (717)
Q Consensus 383 ~~~~~~~~y~~~~~ig~g~~g~v~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~-h~ni~~~~~~~ 454 (717)
.+....++|++.++||+|+||.||+|.+. .+..||+|++.... ....+.+.+|+++++++. ||||+++++++
T Consensus 31 ~~~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~ 110 (400)
T cd05105 31 RWEFPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGAC 110 (400)
T ss_pred ceeccccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEE
Confidence 34455779999999999999999999842 23469999886432 334567899999999995 99999999996
Q ss_pred ccccCCCCceEEEEEecCCCCChhhhccCCCCCc----------------------------------------------
Q 005045 455 SSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEH---------------------------------------------- 488 (717)
Q Consensus 455 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~---------------------------------------------- 488 (717)
. +....++||||+++|+|.+++.......
T Consensus 111 ~-----~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (400)
T cd05105 111 T-----KSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADT 185 (400)
T ss_pred c-----cCCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccc
Confidence 3 4458999999999999998875421100
Q ss_pred -------------------------------------------ccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecC
Q 005045 489 -------------------------------------------YQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCD 525 (717)
Q Consensus 489 -------------------------------------------~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~d 525 (717)
.....+++..+..++.||+.|++|||+. +++|||
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~d 262 (400)
T cd05105 186 TQYVPMLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASK---NCVHRD 262 (400)
T ss_pred cccchhhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCC
Confidence 0013478888999999999999999997 999999
Q ss_pred CCCCCEEeCCCCceEEeeeccchhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHh-CC
Q 005045 526 LKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFT-GK 603 (717)
Q Consensus 526 lkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~ellt-g~ 603 (717)
|||+||+++.++.+||+|||++....... .........++..|+|||.+.+ .++.++|||||||++|+|++ |.
T Consensus 263 ikp~Nill~~~~~~kL~DfGla~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~ 337 (400)
T cd05105 263 LAARNVLLAQGKIVKICDFGLARDIMHDS-----NYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGG 337 (400)
T ss_pred CChHhEEEeCCCEEEEEeCCcceeccccc-----cccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCC
Confidence 99999999999999999999987642111 1111122346678999999654 58999999999999999997 99
Q ss_pred CCCCCCCCCchhhhHHHHhcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhc
Q 005045 604 RPTGDMFKDDFSIHMFVSMALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLM 683 (717)
Q Consensus 604 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 683 (717)
.||.......... .... ... .. ..+..++..+.+++.+
T Consensus 338 ~P~~~~~~~~~~~-~~~~--------~~~--~~-------------------------------~~~~~~~~~l~~li~~ 375 (400)
T cd05105 338 TPYPGMIVDSTFY-NKIK--------SGY--RM-------------------------------AKPDHATQEVYDIMVK 375 (400)
T ss_pred CCCcccchhHHHH-HHHh--------cCC--CC-------------------------------CCCccCCHHHHHHHHH
Confidence 9986542221110 0000 000 00 0112235678899999
Q ss_pred cCCCCcCCCCCHHHHHHHHHHHH
Q 005045 684 CSTTSPRERIAMNVVVNNLKTIR 706 (717)
Q Consensus 684 cl~~~p~~Rps~~eil~~l~~i~ 706 (717)
||+.+|++|||+.+|.++|+++.
T Consensus 376 cl~~dP~~RPt~~~l~~~l~~l~ 398 (400)
T cd05105 376 CWNSEPEKRPSFLHLSDIVESLL 398 (400)
T ss_pred HCccCHhHCcCHHHHHHHHHHHc
Confidence 99999999999999999999865
No 102
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=2.3e-35 Score=306.44 Aligned_cols=283 Identities=23% Similarity=0.297 Sum_probs=201.6
Q ss_pred cccccccccCcccccceEEEEeC-CCchhhhHHhHhh-hhhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceEE
Q 005045 389 DNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQ-QQGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFKA 466 (717)
Q Consensus 389 ~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~ 466 (717)
++|++.++||+|+||.||++.+. +++.+|+|.+... .......+.+|++++++++||||+++++.+. .++..+
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~~~~~ 75 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFY-----SDGEIS 75 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-----eCCEEE
Confidence 47999999999999999999965 7888999987654 2334567889999999999999999999853 456899
Q ss_pred EEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeecc
Q 005045 467 LVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGL 546 (717)
Q Consensus 467 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~ 546 (717)
+||||+++++|.+++... ..+++..+..++.|+++||+|||+.+ +++||||+|+||+++.++.+||+|||.
T Consensus 76 lv~ey~~~~~L~~~l~~~-------~~~~~~~~~~~~~~i~~~l~~lH~~~--~i~H~dl~p~nil~~~~~~~~l~dfg~ 146 (308)
T cd06615 76 ICMEHMDGGSLDQVLKKA-------GRIPENILGKISIAVLRGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGV 146 (308)
T ss_pred EEeeccCCCcHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHhhC--CEEECCCChHHEEEecCCcEEEccCCC
Confidence 999999999999999754 56889999999999999999999732 899999999999999999999999998
Q ss_pred chhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHHHhcCC
Q 005045 547 AKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVSMALP 625 (717)
Q Consensus 547 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 625 (717)
+...... ......++..|+|||.+.+ .++.++|||||||++|+|++|..||....... ........ .
T Consensus 147 ~~~~~~~---------~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~--~~~~~~~~-~ 214 (308)
T cd06615 147 SGQLIDS---------MANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKE--LEAMFGRP-V 214 (308)
T ss_pred ccccccc---------ccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhh--HHHhhcCc-c
Confidence 8654111 1123467889999999765 47899999999999999999999996543211 11111110 0
Q ss_pred hhhhhh---cCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHHHH
Q 005045 626 DHVMDI---LDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVNNL 702 (717)
Q Consensus 626 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~~l 702 (717)
...... .................+......... .+.. ....++..+.+++.+|++.+|++|||++||++.-
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~----~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~ 288 (308)
T cd06615 215 SEGEAKESHRPVSGHPPDSPRPMAIFELLDYIVNEP--PPKL----PSGAFSDEFQDFVDKCLKKNPKERADLKELTKHP 288 (308)
T ss_pred ccccccCCcccccCCCCCccchhhHHHHHHHHhcCC--CccC----cCcccCHHHHHHHHHHccCChhhCcCHHHHhcCh
Confidence 000000 000000000011111111111111000 0000 1112456689999999999999999999999764
Q ss_pred H
Q 005045 703 K 703 (717)
Q Consensus 703 ~ 703 (717)
.
T Consensus 289 ~ 289 (308)
T cd06615 289 F 289 (308)
T ss_pred h
Confidence 3
No 103
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=1.3e-35 Score=299.40 Aligned_cols=247 Identities=26% Similarity=0.423 Sum_probs=189.9
Q ss_pred cccCcccccceEEEEeC-CCchhhhHHhHhh-hhhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceEEEEEecC
Q 005045 395 NLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQ-QQGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFKALVFEFM 472 (717)
Q Consensus 395 ~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~lv~e~~ 472 (717)
+.||+|++|.||+|.++ +++.+|+|.+... .......+.+|+++++.++||||+++++++. .....++||||+
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~lv~e~~ 75 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCT-----QKQPIYIVMELV 75 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-----CCCCeEEEEeec
Confidence 46899999999999965 7889999987543 2344577889999999999999999999854 345789999999
Q ss_pred CCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeeccchhccc
Q 005045 473 SNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFE 552 (717)
Q Consensus 473 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 552 (717)
++++|.+++.... ..+++..++.++.|++.||+|||+. +++||||+|+||+++.++.+||+|||.+.....
T Consensus 76 ~~~~L~~~~~~~~------~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~ 146 (252)
T cd05084 76 QGGDFLTFLRTEG------PRLKVKELIQMVENAAAGMEYLESK---HCIHRDLAARNCLVTEKNVLKISDFGMSREEED 146 (252)
T ss_pred cCCcHHHHHHhCC------CCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEEcCCCcEEECccccCccccc
Confidence 9999999986432 4578999999999999999999997 999999999999999999999999999875421
Q ss_pred ccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHh-CCCCCCCCCCCchhhhHHHHhcCChhhhh
Q 005045 553 ISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFT-GKRPTGDMFKDDFSIHMFVSMALPDHVMD 630 (717)
Q Consensus 553 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 630 (717)
.. ..........+..|+|||.+.+ .++.++|||||||++|+|++ |..||....... ....
T Consensus 147 ~~-----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~--~~~~----------- 208 (252)
T cd05084 147 GV-----YASTGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQ--TREA----------- 208 (252)
T ss_pred cc-----ccccCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHH--HHHH-----------
Confidence 10 0000111123457999999654 58999999999999999998 888886432211 1000
Q ss_pred hcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHHHHH
Q 005045 631 ILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVNNLK 703 (717)
Q Consensus 631 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~~l~ 703 (717)
+....... .+..++..+.+++.+|++.+|++|||+.|++++|.
T Consensus 209 -~~~~~~~~-----------------------------~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 209 -IEQGVRLP-----------------------------CPELCPDAVYRLMERCWEYDPGQRPSFSTVHQELQ 251 (252)
T ss_pred -HHcCCCCC-----------------------------CcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence 00000000 11123567889999999999999999999999875
No 104
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=1.3e-35 Score=299.87 Aligned_cols=251 Identities=25% Similarity=0.403 Sum_probs=195.4
Q ss_pred cccccccccCcccccceEEEEeCCCchhhhHHhHhhhhhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceEEEE
Q 005045 389 DNFSKENLIGTGSFGSVYKGTLGDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFKALV 468 (717)
Q Consensus 389 ~~y~~~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~lv 468 (717)
++|++.+.||+|++|.||.|.++.+..+|+|.+..... ....+.+|+.++++++||||+++++++. .....++|
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~lv 77 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMKLSHEKLVQLYGVCT-----KQRPIYIV 77 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCcc-cHHHHHHHHHHHhcCCCCCeeeEEEEEc-----cCCCcEEE
Confidence 57899999999999999999987667799998764332 2366889999999999999999999864 34478999
Q ss_pred EecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeeccch
Q 005045 469 FEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAK 548 (717)
Q Consensus 469 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~ 548 (717)
|||+++++|.+++.... ..+++..++.++.||+.|++|||+. +++|+||+|+||+++.++.+||+|||.+.
T Consensus 78 ~e~~~~~~l~~~i~~~~------~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~d~g~~~ 148 (256)
T cd05113 78 TEYMSNGCLLNYLREHG------KRFQPSQLLEMCKDVCEGMAYLESK---QFIHRDLAARNCLVDDQGCVKVSDFGLSR 148 (256)
T ss_pred EEcCCCCcHHHHHHhcC------CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCCEEECCCccce
Confidence 99999999999987542 3589999999999999999999997 99999999999999999999999999987
Q ss_pred hcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHh-CCCCCCCCCCCchhhhHHHHhcCCh
Q 005045 549 FLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFT-GKRPTGDMFKDDFSIHMFVSMALPD 626 (717)
Q Consensus 549 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 626 (717)
..... .........++..|+|||.+.+ .++.++|||||||++|+|++ |..||....... .....
T Consensus 149 ~~~~~------~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~--~~~~~------ 214 (256)
T cd05113 149 YVLDD------EYTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSE--TVEKV------ 214 (256)
T ss_pred ecCCC------ceeecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHH--HHHHH------
Confidence 54211 1111122345678999999754 58899999999999999999 999986543211 11110
Q ss_pred hhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHHHHH
Q 005045 627 HVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVNNLK 703 (717)
Q Consensus 627 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~~l~ 703 (717)
........ +...+..+.+++.+||+.+|++|||+.+|++.++
T Consensus 215 -----~~~~~~~~------------------------------~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 215 -----SQGLRLYR------------------------------PHLASEKVYAIMYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred -----hcCCCCCC------------------------------CCCCCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence 00000000 0011456789999999999999999999998763
No 105
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=1.2e-35 Score=310.84 Aligned_cols=196 Identities=27% Similarity=0.415 Sum_probs=162.8
Q ss_pred cccccccCcccccceEEEEeC-CCchhhhHHhHhhh---hhHHHHHHHHHHHH---hcCCCCceeEEEEeeccccCCCCc
Q 005045 391 FSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQ---QGALKSFIDECNAL---KSTRHRNILRVITACSSVDLEGND 463 (717)
Q Consensus 391 y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l---~~l~h~ni~~~~~~~~~~~~~~~~ 463 (717)
|++.+.||+|++|.||+|.+. +++.||+|++.... ....+.+..|++++ +.++||||+++++++ ...+
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~-----~~~~ 75 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACF-----QTED 75 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEE-----EcCC
Confidence 778999999999999999965 78999999986442 22345566666654 567899999999984 4456
Q ss_pred eEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEee
Q 005045 464 FKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGD 543 (717)
Q Consensus 464 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~D 543 (717)
..|+||||+++++|..++.. ..+++..+..++.||+.||+|||+. +++||||||+||+++.++.+||+|
T Consensus 76 ~~~lv~E~~~~~~L~~~~~~--------~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrdlkp~Nill~~~~~~kL~D 144 (324)
T cd05589 76 HVCFVMEYAAGGDLMMHIHT--------DVFSEPRAVFYAACVVLGLQYLHEN---KIVYRDLKLDNLLLDTEGFVKIAD 144 (324)
T ss_pred EEEEEEcCCCCCcHHHHhhc--------CCCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCcEEeCc
Confidence 89999999999999888753 3589999999999999999999998 999999999999999999999999
Q ss_pred eccchhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHhCCCCCCCC
Q 005045 544 FGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRPTGDM 609 (717)
Q Consensus 544 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~ 609 (717)
||.+..... .........|++.|+|||.+.+ .++.++|||||||++|+|++|..||...
T Consensus 145 fg~~~~~~~-------~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~ 204 (324)
T cd05589 145 FGLCKEGMG-------FGDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGD 204 (324)
T ss_pred ccCCccCCC-------CCCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCC
Confidence 998864311 1111234568999999999765 4789999999999999999999999654
No 106
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=6.1e-38 Score=293.99 Aligned_cols=251 Identities=24% Similarity=0.353 Sum_probs=210.5
Q ss_pred cccccccccccCcccccceEEEEeC-CCchhhhHHhHhhhhhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceE
Q 005045 387 STDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFK 465 (717)
Q Consensus 387 ~~~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~ 465 (717)
+..-|.++.++|+|.||.||+|.++ +|+.+|+|.+.... ..+.+..|+.++++++.|++|++|+.++- ...+
T Consensus 31 PEEVFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~s--DLQEIIKEISIMQQC~S~yVVKYYGSYFK-----~sDL 103 (502)
T KOG0574|consen 31 PEEVFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDT--DLQEIIKEISIMQQCKSKYVVKYYGSYFK-----HSDL 103 (502)
T ss_pred hHHHHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCccc--hHHHHHHHHHHHHHcCCchhhhhhhhhcc-----CCce
Confidence 4456889999999999999999966 89999999987653 45778899999999999999999999643 3479
Q ss_pred EEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeec
Q 005045 466 ALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFG 545 (717)
Q Consensus 466 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg 545 (717)
|||||||..|++.|.++.+. +.+++.++..+.+..++||.|||.. .-+|||||+.||+++.+|.+||+|||
T Consensus 104 WIVMEYCGAGSiSDI~R~R~------K~L~E~EIs~iL~~TLKGL~YLH~~---~KIHRDIKAGNILLNT~G~AKLADFG 174 (502)
T KOG0574|consen 104 WIVMEYCGAGSISDIMRARR------KPLSEQEISAVLRDTLKGLQYLHDL---KKIHRDIKAGNILLNTDGIAKLADFG 174 (502)
T ss_pred EeehhhcCCCcHHHHHHHhc------CCccHHHHHHHHHHHHhHHHHHHHH---HHHHhhcccccEEEcccchhhhhhcc
Confidence 99999999999999998664 7899999999999999999999998 78999999999999999999999999
Q ss_pred cchhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHHHhcC
Q 005045 546 LAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVSMAL 624 (717)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~ 624 (717)
.|-.+ .+........+||+.|||||++.. .|..++||||||++..||..|++||.+..+-... ..+
T Consensus 175 VAGQL-------TDTMAKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAI------FMI 241 (502)
T KOG0574|consen 175 VAGQL-------TDTMAKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAI------FMI 241 (502)
T ss_pred ccchh-------hhhHHhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCccccccccee------Eec
Confidence 99876 223334445789999999999765 5899999999999999999999999886442110 011
Q ss_pred ChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHHH
Q 005045 625 PDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVNN 701 (717)
Q Consensus 625 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~~ 701 (717)
| ..+...+.++++-+..+.+|+++|+-..|++|.||.++++.
T Consensus 242 P-----------------------------------T~PPPTF~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H 283 (502)
T KOG0574|consen 242 P-----------------------------------TKPPPTFKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCEH 283 (502)
T ss_pred c-----------------------------------CCCCCCCCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhh
Confidence 1 11122344667778899999999999999999999998864
No 107
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=4e-35 Score=298.52 Aligned_cols=260 Identities=25% Similarity=0.382 Sum_probs=202.0
Q ss_pred cccccccccCcccccceEEEEeC-CCchhhhHHhHhh---hhhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCce
Q 005045 389 DNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQ---QQGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDF 464 (717)
Q Consensus 389 ~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 464 (717)
++|++.+.||+|++|.||+|... +|+.||+|.++.. .....+.+.+|++++++++|++++++++.+. ..+.
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~-----~~~~ 76 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFI-----ENNE 76 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeee-----cCCe
Confidence 68999999999999999999976 8999999987632 2334577889999999999999999999853 3458
Q ss_pred EEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeee
Q 005045 465 KALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDF 544 (717)
Q Consensus 465 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Df 544 (717)
.++||||+++++|.+++..... ....+++..+..++.+++.|++|||+. |++||||+|+||+++.++.++|+||
T Consensus 77 ~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~nil~~~~~~~~l~d~ 150 (267)
T cd08224 77 LNIVLELADAGDLSRMIKHFKK---QKRLIPERTIWKYFVQLCSALEHMHSK---RIMHRDIKPANVFITATGVVKLGDL 150 (267)
T ss_pred EEEEEecCCCCCHHHHHHHhcc---cCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecCCcChhhEEECCCCcEEEecc
Confidence 8999999999999998864321 114578999999999999999999998 9999999999999999999999999
Q ss_pred ccchhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHHHhc
Q 005045 545 GLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVSMA 623 (717)
Q Consensus 545 g~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~ 623 (717)
|.+...... ........++..|+|||.+.+ .++.++|||||||++|+|++|..||...............
T Consensus 151 ~~~~~~~~~-------~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~-- 221 (267)
T cd08224 151 GLGRFFSSK-------TTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIE-- 221 (267)
T ss_pred ceeeeccCC-------CcccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhhhh--
Confidence 998754211 111122457888999999655 4889999999999999999999998643211111100000
Q ss_pred CChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHHHHH
Q 005045 624 LPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVNNLK 703 (717)
Q Consensus 624 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~~l~ 703 (717)
....... ....++..+.+++.+||+.+|++|||+.+|++++.
T Consensus 222 ---------~~~~~~~-----------------------------~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~ 263 (267)
T cd08224 222 ---------KCDYPPL-----------------------------PADHYSEELRDLVSRCINPDPEKRPDISYVLQVAK 263 (267)
T ss_pred ---------cCCCCCC-----------------------------ChhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHH
Confidence 0000000 01123556789999999999999999999999998
Q ss_pred HHH
Q 005045 704 TIR 706 (717)
Q Consensus 704 ~i~ 706 (717)
.++
T Consensus 264 ~~~ 266 (267)
T cd08224 264 EMH 266 (267)
T ss_pred Hhc
Confidence 875
No 108
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-37 Score=322.82 Aligned_cols=258 Identities=28% Similarity=0.467 Sum_probs=211.5
Q ss_pred ccccccccCcccccceEEEEeC-C---CchhhhHHhHhhh-hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCce
Q 005045 390 NFSKENLIGTGSFGSVYKGTLG-D---GTIVAIKVLKLQQ-QGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDF 464 (717)
Q Consensus 390 ~y~~~~~ig~g~~g~v~~~~~~-~---~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 464 (717)
...+.++||.|.||.|+.|+.+ . ...||||.++... .+++..|..|+.||-+++||||+++.++ ....+.
T Consensus 630 ~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGV-----VTks~P 704 (996)
T KOG0196|consen 630 CVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGV-----VTKSKP 704 (996)
T ss_pred heEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEE-----EecCce
Confidence 4478899999999999999965 3 4469999998663 4567889999999999999999999999 556678
Q ss_pred EEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeee
Q 005045 465 KALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDF 544 (717)
Q Consensus 465 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Df 544 (717)
.+||+|||++|+|+.+++.+. +.+++.+...+.++||.||.||-+. +||||||.++||+|+.+-.+|++||
T Consensus 705 vMIiTEyMENGsLDsFLR~~D------GqftviQLVgMLrGIAsGMkYLsdm---~YVHRDLAARNILVNsnLvCKVsDF 775 (996)
T KOG0196|consen 705 VMIITEYMENGSLDSFLRQND------GQFTVIQLVGMLRGIASGMKYLSDM---NYVHRDLAARNILVNSNLVCKVSDF 775 (996)
T ss_pred eEEEhhhhhCCcHHHHHhhcC------CceEeehHHHHHHHHHHHhHHHhhc---CchhhhhhhhheeeccceEEEeccc
Confidence 999999999999999999875 5688888999999999999999998 9999999999999999999999999
Q ss_pred ccchhcccccCCCCCCcceeecccccccccCCCccC-CCCCcccchhhHHHHHHHHHh-CCCCCCCCCCCchhhhHHHHh
Q 005045 545 GLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMN-GQVSILGDIYSYGILLLEMFT-GKRPTGDMFKDDFSIHMFVSM 622 (717)
Q Consensus 545 g~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~ 622 (717)
|+++.+.+.. .......+..-+..|-|||.+. ++++.+|||||||+||||.++ |..||=++...+
T Consensus 776 GLSRvledd~----~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQd--------- 842 (996)
T KOG0196|consen 776 GLSRVLEDDP----EAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQD--------- 842 (996)
T ss_pred cceeecccCC----CccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHH---------
Confidence 9999662211 1111222233457899999964 579999999999999999998 999986553322
Q ss_pred cCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHHHH
Q 005045 623 ALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVNNL 702 (717)
Q Consensus 623 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~~l 702 (717)
+++..+..+. .+.+.+||..|.+|+..|||+|-.+||.+.+|+..|
T Consensus 843 ---------------------------VIkaIe~gyR-------LPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~l 888 (996)
T KOG0196|consen 843 ---------------------------VIKAIEQGYR-------LPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTL 888 (996)
T ss_pred ---------------------------HHHHHHhccC-------CCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHH
Confidence 1111111111 125678999999999999999999999999999999
Q ss_pred HHHHHH
Q 005045 703 KTIRNC 708 (717)
Q Consensus 703 ~~i~~~ 708 (717)
.++-..
T Consensus 889 DklIrn 894 (996)
T KOG0196|consen 889 DKLIRN 894 (996)
T ss_pred HHHhcC
Confidence 987644
No 109
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=1.3e-35 Score=325.43 Aligned_cols=266 Identities=21% Similarity=0.283 Sum_probs=202.2
Q ss_pred ccccccccccccccccCcccccceEEEEeC-CCchhhhHHhHhh--hhhHHHHHHHHHHHHhcCCCCceeEEEEeecccc
Q 005045 382 SDISKSTDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQ--QQGALKSFIDECNALKSTRHRNILRVITACSSVD 458 (717)
Q Consensus 382 ~~~~~~~~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~ 458 (717)
+......++|++.+.||+|+||.||.|... +|+.||+|++... .......+.+|+..+..++|+||+++...+....
T Consensus 25 ~~~~~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~ 104 (496)
T PTZ00283 25 ATAKEQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKD 104 (496)
T ss_pred ccccccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceeccc
Confidence 344556789999999999999999999954 7999999998654 2344567889999999999999999877643221
Q ss_pred C---CCCceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCC
Q 005045 459 L---EGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDK 535 (717)
Q Consensus 459 ~---~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~ 535 (717)
. ......++||||+++|+|.+++..... ....+++..+..++.|++.||+|+|+. +|+||||||+||+++.
T Consensus 105 ~~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~---~~~~l~e~~~~~i~~qll~aL~~lH~~---~IiHrDLKP~NILl~~ 178 (496)
T PTZ00283 105 PRNPENVLMIALVLDYANAGDLRQEIKSRAK---TNRTFREHEAGLLFIQVLLAVHHVHSK---HMIHRDIKSANILLCS 178 (496)
T ss_pred ccCcccceEEEEEEeCCCCCcHHHHHHHhhc---cCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEeC
Confidence 1 111246899999999999999864321 114689999999999999999999997 9999999999999999
Q ss_pred CCceEEeeeccchhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHhCCCCCCCCCCCch
Q 005045 536 DMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDF 614 (717)
Q Consensus 536 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~ 614 (717)
++.+||+|||+++...... .........||+.|+|||++.+ .++.++|||||||++|||++|..||......
T Consensus 179 ~~~vkL~DFGls~~~~~~~-----~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~-- 251 (496)
T PTZ00283 179 NGLVKLGDFGFSKMYAATV-----SDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENME-- 251 (496)
T ss_pred CCCEEEEecccCeeccccc-----cccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHH--
Confidence 9999999999987652211 1112234568999999999765 4899999999999999999999999653211
Q ss_pred hhhHHHHhcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCC
Q 005045 615 SIHMFVSMALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIA 694 (717)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps 694 (717)
..+. ......... .+..++..+.+++.+||+.+|++|||
T Consensus 252 ---~~~~--------~~~~~~~~~------------------------------~~~~~~~~l~~li~~~L~~dP~~RPs 290 (496)
T PTZ00283 252 ---EVMH--------KTLAGRYDP------------------------------LPPSISPEMQEIVTALLSSDPKRRPS 290 (496)
T ss_pred ---HHHH--------HHhcCCCCC------------------------------CCCCCCHHHHHHHHHHcccChhhCcC
Confidence 1110 111100000 11123556889999999999999999
Q ss_pred HHHHHHH
Q 005045 695 MNVVVNN 701 (717)
Q Consensus 695 ~~eil~~ 701 (717)
+.|+++.
T Consensus 291 ~~ell~~ 297 (496)
T PTZ00283 291 SSKLLNM 297 (496)
T ss_pred HHHHHhC
Confidence 9999864
No 110
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=1.8e-35 Score=304.36 Aligned_cols=270 Identities=20% Similarity=0.268 Sum_probs=206.0
Q ss_pred CCCcccccccccccccccccCcccccceEEEEeC-CCchhhhHHhHhhhhhHHHHHHHHHHHHhcC-CCCceeEEEEeec
Q 005045 378 GMSYSDISKSTDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQQGALKSFIDECNALKST-RHRNILRVITACS 455 (717)
Q Consensus 378 ~~s~~~~~~~~~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~ 455 (717)
.+.++.+....++|++.+.||+|++|.||+|..+ +++.+|+|++.... .....+.+|+.+++.+ +||||+++++.+.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 85 (286)
T cd06638 7 TIIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH-DIDEEIEAEYNILKALSDHPNVVKFYGMYY 85 (286)
T ss_pred eEEeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc-chHHHHHHHHHHHHHHhcCCCeeeeeeeee
Confidence 3567788889999999999999999999999965 78899999876432 2235677899999999 7999999999876
Q ss_pred cccCCCCceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCC
Q 005045 456 SVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDK 535 (717)
Q Consensus 456 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~ 535 (717)
......++..++||||+++++|.+++..... ....+++..+..++.|++.|+.|||+. +++||||||+||+++.
T Consensus 86 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~ 159 (286)
T cd06638 86 KKDVKNGDQLWLVLELCNGGSVTDLVKGFLK---RGERMEEPIIAYILHEALMGLQHLHVN---KTIHRDVKGNNILLTT 159 (286)
T ss_pred ecccCCCCeEEEEEeecCCCCHHHHHHHhhc---cCccccHHHHHHHHHHHHHHHHHHHhC---CccccCCCHHhEEECC
Confidence 5444556789999999999999998753211 114678899999999999999999997 9999999999999999
Q ss_pred CCceEEeeeccchhcccccCCCCCCcceeecccccccccCCCccC------CCCCcccchhhHHHHHHHHHhCCCCCCCC
Q 005045 536 DMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMN------GQVSILGDIYSYGILLLEMFTGKRPTGDM 609 (717)
Q Consensus 536 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~------~~~~~~sDvwslG~vl~elltg~~p~~~~ 609 (717)
++.++|+|||.+...... ........|+..|+|||++. ..++.++||||+||++|+|++|+.||...
T Consensus 160 ~~~~kl~dfg~~~~~~~~-------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~ 232 (286)
T cd06638 160 EGGVKLVDFGVSAQLTST-------RLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADL 232 (286)
T ss_pred CCCEEEccCCceeecccC-------CCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCC
Confidence 999999999998765211 11122345889999999864 23788999999999999999999998654
Q ss_pred CCCchhhhHHHHhcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCc
Q 005045 610 FKDDFSIHMFVSMALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSP 689 (717)
Q Consensus 610 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p 689 (717)
..... . .. . .....+... .+..++..+.+++.+||+.+|
T Consensus 233 ~~~~~-~---~~--~----~~~~~~~~~-------------------------------~~~~~~~~~~~li~~~l~~~p 271 (286)
T cd06638 233 HPMRA-L---FK--I----PRNPPPTLH-------------------------------QPELWSNEFNDFIRKCLTKDY 271 (286)
T ss_pred chhHH-H---hh--c----cccCCCccc-------------------------------CCCCcCHHHHHHHHHHccCCc
Confidence 22110 0 00 0 000000000 001124457889999999999
Q ss_pred CCCCCHHHHHHHH
Q 005045 690 RERIAMNVVVNNL 702 (717)
Q Consensus 690 ~~Rps~~eil~~l 702 (717)
++|||+.||++..
T Consensus 272 ~~Rps~~ell~~~ 284 (286)
T cd06638 272 EKRPTVSDLLQHV 284 (286)
T ss_pred ccCCCHHHHhhcc
Confidence 9999999998753
No 111
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=1.8e-35 Score=324.55 Aligned_cols=282 Identities=18% Similarity=0.223 Sum_probs=193.0
Q ss_pred ccccccccccccccccCcccccceEEEEeC-CCchhhhHHhHhhhhhHHHHHHHHHHHHhcCCC------CceeEEEEee
Q 005045 382 SDISKSTDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQQGALKSFIDECNALKSTRH------RNILRVITAC 454 (717)
Q Consensus 382 ~~~~~~~~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h------~ni~~~~~~~ 454 (717)
.++....++|++.++||+|+||.||+|.+. .++.||||++.... ........|+++++.+.| .+++++++++
T Consensus 122 ~~~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~ 200 (467)
T PTZ00284 122 EDIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP-KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYF 200 (467)
T ss_pred CccccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch-hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEE
Confidence 344556789999999999999999999965 68889999986432 122345567777766644 4588887775
Q ss_pred ccccCCCCceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeC
Q 005045 455 SSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLD 534 (717)
Q Consensus 455 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~ 534 (717)
. ....+.|+|||++ +++|.+++... ..+++..+..++.||+.||+|||+. .+|+||||||+||+++
T Consensus 201 ~----~~~~~~~iv~~~~-g~~l~~~l~~~-------~~l~~~~~~~i~~qi~~aL~yLH~~--~gIiHrDlKP~NILl~ 266 (467)
T PTZ00284 201 Q----NETGHMCIVMPKY-GPCLLDWIMKH-------GPFSHRHLAQIIFQTGVALDYFHTE--LHLMHTDLKPENILME 266 (467)
T ss_pred E----cCCceEEEEEecc-CCCHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHhc--CCeecCCCCHHHEEEe
Confidence 3 2345789999998 78899888654 5689999999999999999999973 2899999999999998
Q ss_pred CCC----------------ceEEeeeccchhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHH
Q 005045 535 KDM----------------TAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLL 597 (717)
Q Consensus 535 ~~~----------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~ 597 (717)
.++ .+||+|||.+... ........||..|+|||++.+ .++.++|||||||++|
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~vkl~DfG~~~~~----------~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~ 336 (467)
T PTZ00284 267 TSDTVVDPVTNRALPPDPCRVRICDLGGCCDE----------RHSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIY 336 (467)
T ss_pred cCCcccccccccccCCCCceEEECCCCccccC----------ccccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHH
Confidence 665 4999999987542 111234568999999999765 5899999999999999
Q ss_pred HHHhCCCCCCCCCCCch-hhhHHHHhcCChhhhhh---------cCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcch
Q 005045 598 EMFTGKRPTGDMFKDDF-SIHMFVSMALPDHVMDI---------LDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTK 667 (717)
Q Consensus 598 elltg~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 667 (717)
||++|+.||......+. .........+|..+... ++......+.........+.... ..
T Consensus 337 elltG~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~------- 405 (467)
T PTZ00284 337 ELYTGKLLYDTHDNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARAR----PV------- 405 (467)
T ss_pred HHHhCCCCCCCCChHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhccc----ch-------
Confidence 99999999976432211 11111111223222111 11000000000111111110000 00
Q ss_pred hhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHH
Q 005045 668 NKLEECFVSVLRIGLMCSTTSPRERIAMNVVVN 700 (717)
Q Consensus 668 ~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~ 700 (717)
...-....+.+|+.+||++||++||||+|+++
T Consensus 406 -~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~ 437 (467)
T PTZ00284 406 -REVIRDDLLCDLIYGLLHYDRQKRLNARQMTT 437 (467)
T ss_pred -hhhhchHHHHHHHHHhCCcChhhCCCHHHHhc
Confidence 00011346789999999999999999999986
No 112
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=1.6e-35 Score=301.50 Aligned_cols=260 Identities=25% Similarity=0.385 Sum_probs=201.6
Q ss_pred cccccccccCcccccceEEEEe-CCCchhhhHHhHhh---hhhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCce
Q 005045 389 DNFSKENLIGTGSFGSVYKGTL-GDGTIVAIKVLKLQ---QQGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDF 464 (717)
Q Consensus 389 ~~y~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 464 (717)
++|++.+.||+|++|.||+|.. .+++.+++|.+... .......+.+|+++++.+.|+||+++++.+. .++.
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-----~~~~ 76 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFI-----EDNE 76 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeE-----eCCe
Confidence 5799999999999999999995 48899999977542 2334567889999999999999999999853 3458
Q ss_pred EEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeee
Q 005045 465 KALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDF 544 (717)
Q Consensus 465 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Df 544 (717)
.+++|||+++++|.+++..... ....+++..++.++.||+.|++|||+. +++|+||+|+||+++.++.++|+||
T Consensus 77 ~~~v~e~~~~~~L~~~~~~~~~---~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~df 150 (267)
T cd08229 77 LNIVLELADAGDLSRMIKHFKK---QKRLIPEKTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDL 150 (267)
T ss_pred EEEEEEecCCCCHHHHHHHhhc---cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEECcc
Confidence 8999999999999998864211 114689999999999999999999998 9999999999999999999999999
Q ss_pred ccchhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHHHhc
Q 005045 545 GLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVSMA 623 (717)
Q Consensus 545 g~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~ 623 (717)
|.+...... ........++..|+|||...+ .++.++||||||+++|+|++|..||.....+......
T Consensus 151 g~~~~~~~~-------~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~----- 218 (267)
T cd08229 151 GLGRFFSSK-------TTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCK----- 218 (267)
T ss_pred hhhhccccC-------CcccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhh-----
Confidence 988754211 111123457889999999755 4789999999999999999999998653222111100
Q ss_pred CChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHHHHH
Q 005045 624 LPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVNNLK 703 (717)
Q Consensus 624 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~~l~ 703 (717)
.+.....+.. ....++..+.+++.+||+.+|++||||.+|++.++
T Consensus 219 ---~~~~~~~~~~--------------------------------~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~ 263 (267)
T cd08229 219 ---KIEQCDYPPL--------------------------------PSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAK 263 (267)
T ss_pred ---hhhcCCCCCC--------------------------------CcccccHHHHHHHHHhcCCCcccCCCHHHHHHHHh
Confidence 0000000100 01123567889999999999999999999999998
Q ss_pred HHH
Q 005045 704 TIR 706 (717)
Q Consensus 704 ~i~ 706 (717)
++.
T Consensus 264 ~~~ 266 (267)
T cd08229 264 RMH 266 (267)
T ss_pred hhc
Confidence 763
No 113
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.7e-36 Score=279.51 Aligned_cols=251 Identities=23% Similarity=0.348 Sum_probs=196.8
Q ss_pred ccccccccccCcccccceEEEEeC-CCchhhhHHhHhh--------hhhHHHHHHHHHHHHhcC-CCCceeEEEEeeccc
Q 005045 388 TDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQ--------QQGALKSFIDECNALKST-RHRNILRVITACSSV 457 (717)
Q Consensus 388 ~~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~--------~~~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~ 457 (717)
.+.|.-.+.+|.|..+.|-++.++ +|+.+|+|++... ..+..+.-..|+.|++++ .||+|+++.++
T Consensus 16 y~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~---- 91 (411)
T KOG0599|consen 16 YAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDV---- 91 (411)
T ss_pred HhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeee----
Confidence 456788899999999999999865 8888999988532 123355667899999998 89999999999
Q ss_pred cCCCCceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCC
Q 005045 458 DLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDM 537 (717)
Q Consensus 458 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~ 537 (717)
++.+.+.++|+|.|+.|-|.|++... -.+++.+.++||+|+..|+.|||.. .|||||+||+||+++++.
T Consensus 92 -yes~sF~FlVFdl~prGELFDyLts~-------VtlSEK~tR~iMrqlfegVeylHa~---~IVHRDLKpENILlddn~ 160 (411)
T KOG0599|consen 92 -YESDAFVFLVFDLMPRGELFDYLTSK-------VTLSEKETRRIMRQLFEGVEYLHAR---NIVHRDLKPENILLDDNM 160 (411)
T ss_pred -ccCcchhhhhhhhcccchHHHHhhhh-------eeecHHHHHHHHHHHHHHHHHHHHh---hhhhcccChhheeecccc
Confidence 55566999999999999999999865 6789999999999999999999998 999999999999999999
Q ss_pred ceEEeeeccchhcccccCCCCCCcceeecccccccccCCCccCC-------CCCcccchhhHHHHHHHHHhCCCCCCCCC
Q 005045 538 TAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-------QVSILGDIYSYGILLLEMFTGKRPTGDMF 610 (717)
Q Consensus 538 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-------~~~~~sDvwslG~vl~elltg~~p~~~~~ 610 (717)
++||+|||.++.+. ....-...+||++|.|||.+.. .|+..+|+||+||++|.|+.|.+||---
T Consensus 161 ~i~isDFGFa~~l~--------~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHR- 231 (411)
T KOG0599|consen 161 NIKISDFGFACQLE--------PGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHR- 231 (411)
T ss_pred ceEEeccceeeccC--------CchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHH-
Confidence 99999999999872 1122345779999999999642 3788899999999999999999998310
Q ss_pred CCchhhhHHHHhcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcC
Q 005045 611 KDDFSIHMFVSMALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPR 690 (717)
Q Consensus 611 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~ 690 (717)
...... +-+..-... .+ .+.=++.+....++|.+|++.||.
T Consensus 232 -kQmlML-----------R~ImeGkyq----F~-----------------------speWadis~~~KdLIsrlLqVdp~ 272 (411)
T KOG0599|consen 232 -KQMLML-----------RMIMEGKYQ----FR-----------------------SPEWADISATVKDLISRLLQVDPT 272 (411)
T ss_pred -HHHHHH-----------HHHHhcccc----cC-----------------------CcchhhccccHHHHHHHHHeeCch
Confidence 000000 000000000 00 001123355578999999999999
Q ss_pred CCCCHHHHHHH
Q 005045 691 ERIAMNVVVNN 701 (717)
Q Consensus 691 ~Rps~~eil~~ 701 (717)
.|.|++|+++.
T Consensus 273 ~Ritake~LaH 283 (411)
T KOG0599|consen 273 KRITAKEALAH 283 (411)
T ss_pred hcccHHHHhcC
Confidence 99999999964
No 114
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=7.4e-36 Score=310.52 Aligned_cols=273 Identities=21% Similarity=0.306 Sum_probs=195.8
Q ss_pred cccccccccCcccccceEEEEeC-CCchhhhHHhHhhh-hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceEE
Q 005045 389 DNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQ-QGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFKA 466 (717)
Q Consensus 389 ~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~ 466 (717)
++|++.++||+|+||.||+|.++ +++.||+|.+.... ......+.+|++++++++||||+++++++. .++..+
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~~~~~ 80 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVH-----TDKSLT 80 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEe-----eCCeEE
Confidence 57999999999999999999965 78889999886443 223356778999999999999999999853 455899
Q ss_pred EEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeecc
Q 005045 467 LVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGL 546 (717)
Q Consensus 467 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~ 546 (717)
+||||++ +++.+++.... ..+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||.
T Consensus 81 lv~e~~~-~~l~~~~~~~~------~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~ 150 (309)
T cd07872 81 LVFEYLD-KDLKQYMDDCG------NIMSMHNVKIFLYQILRGLAYCHRR---KVLHRDLKPQNLLINERGELKLADFGL 150 (309)
T ss_pred EEEeCCC-CCHHHHHHhcC------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECcccc
Confidence 9999996 58888876442 4578899999999999999999997 999999999999999999999999999
Q ss_pred chhcccccCCCCCCcceeecccccccccCCCccCC--CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHHH---
Q 005045 547 AKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG--QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVS--- 621 (717)
Q Consensus 547 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~--- 621 (717)
+...... ........++..|+|||++.+ .++.++|||||||++|+|++|+.||......+. ......
T Consensus 151 ~~~~~~~-------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~-~~~~~~~~~ 222 (309)
T cd07872 151 ARAKSVP-------TKTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDE-LHLIFRLLG 222 (309)
T ss_pred ceecCCC-------ccccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHHHhC
Confidence 8753111 111123457889999999644 478999999999999999999999976533221 111110
Q ss_pred hcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHH
Q 005045 622 MALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVN 700 (717)
Q Consensus 622 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~ 700 (717)
...+..+..+..... +.. ..................+..+.+++.+|++.+|++|||++|+++
T Consensus 223 ~~~~~~~~~~~~~~~-------------~~~---~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~ 285 (309)
T cd07872 223 TPTEETWPGISSNDE-------------FKN---YNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMK 285 (309)
T ss_pred CCCHHHHhhhcchhh-------------hhh---hhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhc
Confidence 001111111110000 000 000000000000111223556789999999999999999999986
No 115
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=1.1e-35 Score=316.58 Aligned_cols=206 Identities=23% Similarity=0.361 Sum_probs=170.6
Q ss_pred cccccccccCcccccceEEEEeC-CCchhhhHHhHhhh---hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCce
Q 005045 389 DNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQ---QGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDF 464 (717)
Q Consensus 389 ~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 464 (717)
++|++.+.||+|+||.||+|++. +++.||+|++.... ......+.+|+++++.++||||+++++.+ .+++.
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~-----~~~~~ 75 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSF-----QDENY 75 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEE-----EcCCe
Confidence 47999999999999999999965 78999999987542 33456788999999999999999999984 45568
Q ss_pred EEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeee
Q 005045 465 KALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDF 544 (717)
Q Consensus 465 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Df 544 (717)
.|+||||+++++|.+++... ..+++..+..++.||+.||+|||+. +|+||||||+||+++.+|.++|+||
T Consensus 76 ~~lv~E~~~~g~L~~~l~~~-------~~l~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Df 145 (364)
T cd05599 76 LYLIMEYLPGGDMMTLLMKK-------DTFTEEETRFYIAETILAIDSIHKL---GYIHRDIKPDNLLLDAKGHIKLSDF 145 (364)
T ss_pred EEEEECCCCCcHHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEeec
Confidence 99999999999999998754 4689999999999999999999998 9999999999999999999999999
Q ss_pred ccchhcccccCCCCCC-------------------------------cceeecccccccccCCCccCC-CCCcccchhhH
Q 005045 545 GLAKFLFEISDNPSKN-------------------------------QTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSY 592 (717)
Q Consensus 545 g~~~~~~~~~~~~~~~-------------------------------~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwsl 592 (717)
|++..+.......... ........||+.|+|||++.+ .++.++|||||
T Consensus 146 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSl 225 (364)
T cd05599 146 GLCTGLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSL 225 (364)
T ss_pred ccceeccccccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecc
Confidence 9987542211000000 000112458999999999654 58999999999
Q ss_pred HHHHHHHHhCCCCCCCC
Q 005045 593 GILLLEMFTGKRPTGDM 609 (717)
Q Consensus 593 G~vl~elltg~~p~~~~ 609 (717)
||++|+|++|..||...
T Consensus 226 G~il~el~~G~~Pf~~~ 242 (364)
T cd05599 226 GVIMYEMLVGYPPFCSD 242 (364)
T ss_pred hhHHHHhhcCCCCCCCC
Confidence 99999999999999754
No 116
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=8.4e-36 Score=323.18 Aligned_cols=276 Identities=23% Similarity=0.292 Sum_probs=192.3
Q ss_pred cccccccccccCcccccceEEEEeC-CCchhhhHHhHhhhhhHHHHHHHHHHHHhcCCCCceeEEEEeeccccC---CCC
Q 005045 387 STDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRVITACSSVDL---EGN 462 (717)
Q Consensus 387 ~~~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~---~~~ 462 (717)
..++|++.+.||+|+||.||+|... +++.||+|.+.... ....+|+.+++.++||||+++++++....+ ...
T Consensus 64 ~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~ 139 (440)
T PTZ00036 64 PNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKN 139 (440)
T ss_pred cCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCc
Confidence 4568999999999999999999964 78899999875332 233469999999999999999887543221 223
Q ss_pred ceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCC-ceEE
Q 005045 463 DFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDM-TAHV 541 (717)
Q Consensus 463 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~-~~kl 541 (717)
...++||||++ +++.+++..... ....+++..++.++.||+.||+|||+. +|+||||||+||+++.++ .+||
T Consensus 140 ~~l~lvmE~~~-~~l~~~~~~~~~---~~~~l~~~~~~~~~~qi~~gL~yLH~~---~IiHrDLKp~NILl~~~~~~vkL 212 (440)
T PTZ00036 140 IFLNVVMEFIP-QTVHKYMKHYAR---NNHALPLFLVKLYSYQLCRALAYIHSK---FICHRDLKPQNLLIDPNTHTLKL 212 (440)
T ss_pred eEEEEEEecCC-ccHHHHHHHHhh---cCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCcCHHHEEEcCCCCceee
Confidence 35789999996 577776643211 115689999999999999999999997 999999999999999665 7999
Q ss_pred eeeccchhcccccCCCCCCcceeecccccccccCCCccCC--CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHH
Q 005045 542 GDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG--QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMF 619 (717)
Q Consensus 542 ~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~ 619 (717)
+|||+++..... .......|++.|+|||++.+ .++.++|||||||++|||++|.+||.+....+. +...
T Consensus 213 ~DFGla~~~~~~--------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~-~~~i 283 (440)
T PTZ00036 213 CDFGSAKNLLAG--------QRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQ-LVRI 283 (440)
T ss_pred eccccchhccCC--------CCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH-HHHH
Confidence 999999865211 11223567899999999654 489999999999999999999999976432211 1111
Q ss_pred HHh-cCC--hhhhhhcCCCCCC--CCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCC
Q 005045 620 VSM-ALP--DHVMDILDPSMPL--DEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIA 694 (717)
Q Consensus 620 ~~~-~~~--~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps 694 (717)
... .-+ +.+.. ..+.... .+......... ..+...+.++.+|+.+||+++|.+|||
T Consensus 284 ~~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~l~~------------------~~p~~~~~~~~~li~~~L~~dP~~R~t 344 (440)
T PTZ00036 284 IQVLGTPTEDQLKE-MNPNYADIKFPDVKPKDLKK------------------VFPKGTPDDAINFISQFLKYEPLKRLN 344 (440)
T ss_pred HHHhCCCCHHHHHH-hchhhhcccCCccCchhHHH------------------HhccCCCHHHHHHHHHHCCCChhHCcC
Confidence 110 000 00100 0000000 00000000000 001122456889999999999999999
Q ss_pred HHHHHHH
Q 005045 695 MNVVVNN 701 (717)
Q Consensus 695 ~~eil~~ 701 (717)
+.|+++.
T Consensus 345 a~e~l~h 351 (440)
T PTZ00036 345 PIEALAD 351 (440)
T ss_pred HHHHhCC
Confidence 9999843
No 117
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1.9e-35 Score=305.22 Aligned_cols=254 Identities=22% Similarity=0.325 Sum_probs=199.4
Q ss_pred ccccccccccccccCcccccceEEEEeC-CCchhhhHHhHhhhhhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCC
Q 005045 384 ISKSTDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRVITACSSVDLEGN 462 (717)
Q Consensus 384 ~~~~~~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~ 462 (717)
+.....+|++.+.+|+|++|.||+|... +++.|++|.+..........+.+|+.+++.+.|+||+++++.+. ..
T Consensus 15 ~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~-----~~ 89 (296)
T cd06654 15 VGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL-----VG 89 (296)
T ss_pred cCCcccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEE-----eC
Confidence 4455679999999999999999999954 78899999887655445577889999999999999999999854 34
Q ss_pred ceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEe
Q 005045 463 DFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVG 542 (717)
Q Consensus 463 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~ 542 (717)
...++||||+++++|.+++.. ..+++.++..++.|++.|++|||+. +++||||+|+||+++.++.++|+
T Consensus 90 ~~~~lv~e~~~~~~L~~~~~~--------~~~~~~~~~~i~~ql~~aL~~LH~~---gi~H~dLkp~Nill~~~~~~kl~ 158 (296)
T cd06654 90 DELWVVMEYLAGGSLTDVVTE--------TCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLT 158 (296)
T ss_pred CEEEEeecccCCCCHHHHHHh--------cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEEC
Confidence 589999999999999999863 3468889999999999999999997 99999999999999999999999
Q ss_pred eeccchhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHHH
Q 005045 543 DFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVS 621 (717)
Q Consensus 543 Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~ 621 (717)
|||.+...... ........+++.|+|||.+.+ .++.++|||||||++|+|++|..||........ ......
T Consensus 159 dfg~~~~~~~~-------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~-~~~~~~ 230 (296)
T cd06654 159 DFGFCAQITPE-------QSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRA-LYLIAT 230 (296)
T ss_pred ccccchhcccc-------ccccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHh-HHHHhc
Confidence 99988754211 111122457889999999655 478999999999999999999999965432111 000000
Q ss_pred hcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHHH
Q 005045 622 MALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVNN 701 (717)
Q Consensus 622 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~~ 701 (717)
.. .+... .+.+.+..+.+++.+||+.+|++|||+.||++.
T Consensus 231 ~~---------~~~~~-------------------------------~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~ 270 (296)
T cd06654 231 NG---------TPELQ-------------------------------NPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQH 270 (296)
T ss_pred CC---------CCCCC-------------------------------CccccCHHHHHHHHHHCcCCcccCcCHHHHhhC
Confidence 00 00000 011224567889999999999999999999973
No 118
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=6e-36 Score=313.19 Aligned_cols=242 Identities=23% Similarity=0.329 Sum_probs=188.4
Q ss_pred cccCcccccceEEEEeC-CCchhhhHHhHhhh---hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceEEEEEe
Q 005045 395 NLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQ---QGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFKALVFE 470 (717)
Q Consensus 395 ~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~lv~e 470 (717)
+.||+|+||.||+|... +|+.||+|++.... ......+..|+++++.++||||+++.+.+ ...+..|+|||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~-----~~~~~~~lv~E 75 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSF-----QTHDRLCFVME 75 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEE-----EcCCEEEEEEe
Confidence 46899999999999964 78999999986542 23346677899999999999999998884 44568999999
Q ss_pred cCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeeccchhc
Q 005045 471 FMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFL 550 (717)
Q Consensus 471 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~ 550 (717)
|+++++|.+++... ..+++..+..++.||+.||+|||+. ++|+||||||+||+++.++.+||+|||.+...
T Consensus 76 ~~~~~~L~~~l~~~-------~~l~~~~~~~~~~qi~~aL~~lH~~--~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~ 146 (325)
T cd05594 76 YANGGELFFHLSRE-------RVFSEDRARFYGAEIVSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEG 146 (325)
T ss_pred CCCCCcHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHhc--CCEEecCCCCCeEEECCCCCEEEecCCCCeec
Confidence 99999999888654 5689999999999999999999973 29999999999999999999999999998643
Q ss_pred ccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHHHhcCChhhh
Q 005045 551 FEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVSMALPDHVM 629 (717)
Q Consensus 551 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 629 (717)
.. .........|++.|+|||++.+ .++.++|||||||++|+|++|..||.....+. ...
T Consensus 147 ~~-------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~--~~~----------- 206 (325)
T cd05594 147 IK-------DGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEK--LFE----------- 206 (325)
T ss_pred CC-------CCcccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHH--HHH-----------
Confidence 11 1111223568999999999755 58999999999999999999999996532211 000
Q ss_pred hhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCC-----CHHHHHHH
Q 005045 630 DILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERI-----AMNVVVNN 701 (717)
Q Consensus 630 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp-----s~~eil~~ 701 (717)
.+...... .+...+..+.+++.+||+.+|++|+ +++|+++.
T Consensus 207 ~i~~~~~~-------------------------------~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 252 (325)
T cd05594 207 LILMEEIR-------------------------------FPRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQH 252 (325)
T ss_pred HHhcCCCC-------------------------------CCCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcC
Confidence 00000000 0011245578899999999999996 89999854
No 119
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=2.2e-35 Score=299.11 Aligned_cols=255 Identities=27% Similarity=0.479 Sum_probs=198.2
Q ss_pred ccccccccccccCcccccceEEEEeCCCchhhhHHhHhhhhhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceE
Q 005045 386 KSTDNFSKENLIGTGSFGSVYKGTLGDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFK 465 (717)
Q Consensus 386 ~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~ 465 (717)
...++|++.++||+|++|.||.|..+.+..+|+|.+..... ....+.+|+.++++++|++++++++.+. ....
T Consensus 3 ~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~------~~~~ 75 (260)
T cd05070 3 IPRESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQLYAVVS------EEPI 75 (260)
T ss_pred CchHHhhhhheeccccCceEEEEEecCCceeEEEEecCCCC-CHHHHHHHHHHHHhcCCCceEEEEeEEC------CCCc
Confidence 34568999999999999999999988788899998875433 2356889999999999999999998742 2357
Q ss_pred EEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeec
Q 005045 466 ALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFG 545 (717)
Q Consensus 466 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg 545 (717)
+++|||+++++|.+++..... ..+++..++.++.+++.|++|||+. +++||||+|+||+++.++.++|+|||
T Consensus 76 ~lv~e~~~~~~L~~~~~~~~~-----~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~Nili~~~~~~~l~dfg 147 (260)
T cd05070 76 YIVTEYMSKGSLLDFLKDGEG-----RALKLPNLVDMAAQVAAGMAYIERM---NYIHRDLRSANILVGDGLVCKIADFG 147 (260)
T ss_pred EEEEEecCCCcHHHHHHhcCC-----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEEeCCceEEeCCce
Confidence 899999999999999875421 4589999999999999999999998 99999999999999999999999999
Q ss_pred cchhcccccCCCCCCcceeecccccccccCCCccC-CCCCcccchhhHHHHHHHHHh-CCCCCCCCCCCchhhhHHHHhc
Q 005045 546 LAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMN-GQVSILGDIYSYGILLLEMFT-GKRPTGDMFKDDFSIHMFVSMA 623 (717)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~ 623 (717)
.+....... ........++..|+|||... +.++.++||||||+++|+|++ |..||......+ ......
T Consensus 148 ~~~~~~~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~--~~~~~~-- 217 (260)
T cd05070 148 LARLIEDNE------YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNRE--VLEQVE-- 217 (260)
T ss_pred eeeeccCcc------cccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHH--HHHHHH--
Confidence 987642111 11111223556799999964 458999999999999999999 889986532111 111110
Q ss_pred CChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHHHHH
Q 005045 624 LPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVNNLK 703 (717)
Q Consensus 624 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~~l~ 703 (717)
...... .+..++..+.+++.+|++.+|++|||++++.+.|+
T Consensus 218 ----------~~~~~~-----------------------------~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~ 258 (260)
T cd05070 218 ----------RGYRMP-----------------------------CPQDCPISLHELMLQCWKKDPEERPTFEYLQSFLE 258 (260)
T ss_pred ----------cCCCCC-----------------------------CCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHh
Confidence 000000 01122556889999999999999999999999887
Q ss_pred H
Q 005045 704 T 704 (717)
Q Consensus 704 ~ 704 (717)
.
T Consensus 259 ~ 259 (260)
T cd05070 259 D 259 (260)
T ss_pred c
Confidence 5
No 120
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=1.8e-35 Score=305.45 Aligned_cols=268 Identities=24% Similarity=0.425 Sum_probs=202.4
Q ss_pred cccccccccccccccCcccccceEEEEeC------CCchhhhHHhHhhh-hhHHHHHHHHHHHHhcC-CCCceeEEEEee
Q 005045 383 DISKSTDNFSKENLIGTGSFGSVYKGTLG------DGTIVAIKVLKLQQ-QGALKSFIDECNALKST-RHRNILRVITAC 454 (717)
Q Consensus 383 ~~~~~~~~y~~~~~ig~g~~g~v~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~ni~~~~~~~ 454 (717)
++....++|++.+.||+|++|.||++... ....+|+|.+.... .+....+.+|+++++++ +|+||+++++.+
T Consensus 6 ~~~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~ 85 (293)
T cd05053 6 EWELPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVC 85 (293)
T ss_pred ccccCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEE
Confidence 34556778999999999999999999853 23578999887432 23446688999999999 899999999985
Q ss_pred ccccCCCCceEEEEEecCCCCChhhhccCCCCCc---------ccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecC
Q 005045 455 SSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEH---------YQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCD 525 (717)
Q Consensus 455 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~---------~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~d 525 (717)
. ..+..+++|||+++++|.+++....... .....+++..+++++.|++.|++|||+. +++|||
T Consensus 86 ~-----~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~d 157 (293)
T cd05053 86 T-----QEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASK---KCIHRD 157 (293)
T ss_pred c-----CCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHC---Cccccc
Confidence 3 3457899999999999999986432100 1225689999999999999999999997 999999
Q ss_pred CCCCCEEeCCCCceEEeeeccchhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHh-CC
Q 005045 526 LKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFT-GK 603 (717)
Q Consensus 526 lkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~ellt-g~ 603 (717)
|||+||+++.++.+||+|||.+..+..... ........++..|+|||...+ .++.++|||||||++|++++ |.
T Consensus 158 lkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~ 232 (293)
T cd05053 158 LAARNVLVTEDHVMKIADFGLARDIHHIDY-----YRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGG 232 (293)
T ss_pred cceeeEEEcCCCeEEeCccccccccccccc-----eeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCC
Confidence 999999999999999999999986522111 111112234567999999654 58999999999999999998 99
Q ss_pred CCCCCCCCCchhhhHHHHhcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhc
Q 005045 604 RPTGDMFKDDFSIHMFVSMALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLM 683 (717)
Q Consensus 604 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 683 (717)
.||....... .... +...... ..+..++..+.+++.+
T Consensus 233 ~p~~~~~~~~--~~~~------------~~~~~~~-----------------------------~~~~~~~~~~~~li~~ 269 (293)
T cd05053 233 SPYPGIPVEE--LFKL------------LKEGYRM-----------------------------EKPQNCTQELYHLMRD 269 (293)
T ss_pred CCCCCCCHHH--HHHH------------HHcCCcC-----------------------------CCCCCCCHHHHHHHHH
Confidence 9986532111 0000 0000000 0111235568899999
Q ss_pred cCCCCcCCCCCHHHHHHHHHHHH
Q 005045 684 CSTTSPRERIAMNVVVNNLKTIR 706 (717)
Q Consensus 684 cl~~~p~~Rps~~eil~~l~~i~ 706 (717)
|++.+|++||||+|+++.|+.+.
T Consensus 270 ~l~~~p~~Rps~~eil~~l~~~~ 292 (293)
T cd05053 270 CWHEVPSQRPTFKQLVEDLDRML 292 (293)
T ss_pred HcccCcccCcCHHHHHHHHHHhh
Confidence 99999999999999999998874
No 121
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=1.8e-35 Score=314.37 Aligned_cols=259 Identities=21% Similarity=0.256 Sum_probs=199.3
Q ss_pred cccccccccccccccccCcccccceEEEEeC-CCchhhhHHhHhhh---hhHHHHHHHHHHHHhcCCCCceeEEEEeecc
Q 005045 381 YSDISKSTDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQ---QGALKSFIDECNALKSTRHRNILRVITACSS 456 (717)
Q Consensus 381 ~~~~~~~~~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~ 456 (717)
+.+.....++|++.++||+|+||.||+|+.+ +++.||+|++.... ......+.+|+.+++.++||||+++++++
T Consensus 35 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~-- 112 (370)
T cd05596 35 ITKLRMKAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAF-- 112 (370)
T ss_pred hccCCCCHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEE--
Confidence 4455566789999999999999999999965 78899999886432 23345678899999999999999999884
Q ss_pred ccCCCCceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCC
Q 005045 457 VDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKD 536 (717)
Q Consensus 457 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~ 536 (717)
.++...++||||+++|+|.+++.. ..+++..+..++.||+.||+|||+. +|+||||||+||+++.+
T Consensus 113 ---~~~~~~~lv~Ey~~gg~L~~~l~~--------~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~ 178 (370)
T cd05596 113 ---QDDKYLYMVMEYMPGGDLVNLMSN--------YDIPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKS 178 (370)
T ss_pred ---ecCCEEEEEEcCCCCCcHHHHHHh--------cCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEcCC
Confidence 455689999999999999998864 3478888999999999999999997 99999999999999999
Q ss_pred CceEEeeeccchhcccccCCCCCCcceeecccccccccCCCccCC-----CCCcccchhhHHHHHHHHHhCCCCCCCCCC
Q 005045 537 MTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-----QVSILGDIYSYGILLLEMFTGKRPTGDMFK 611 (717)
Q Consensus 537 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-----~~~~~sDvwslG~vl~elltg~~p~~~~~~ 611 (717)
+.+||+|||.+...... .........|++.|+|||++.+ .++.++|||||||++|||++|..||.....
T Consensus 179 ~~~kL~DfG~~~~~~~~------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~ 252 (370)
T cd05596 179 GHLKLADFGTCMKMDAN------GMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL 252 (370)
T ss_pred CCEEEEeccceeeccCC------CcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCH
Confidence 99999999998764211 1111223568999999999643 378999999999999999999999975422
Q ss_pred CchhhhHHHHhcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCC
Q 005045 612 DDFSIHMFVSMALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRE 691 (717)
Q Consensus 612 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~ 691 (717)
.. . ...+.+....... +.....+..+.+++.+|++.+|.+
T Consensus 253 ~~--~-----------~~~i~~~~~~~~~---------------------------~~~~~~s~~~~~li~~~L~~~p~r 292 (370)
T cd05596 253 VG--T-----------YSKIMDHKNSLTF---------------------------PDDIEISKQAKDLICAFLTDREVR 292 (370)
T ss_pred HH--H-----------HHHHHcCCCcCCC---------------------------CCcCCCCHHHHHHHHHHccChhhc
Confidence 10 0 0111110000000 000112456788999999999987
Q ss_pred --CCCHHHHHHH
Q 005045 692 --RIAMNVVVNN 701 (717)
Q Consensus 692 --Rps~~eil~~ 701 (717)
|||+.|+++.
T Consensus 293 ~~R~s~~ell~h 304 (370)
T cd05596 293 LGRNGVDEIKSH 304 (370)
T ss_pred cCCCCHHHHhcC
Confidence 9999999764
No 122
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=2.8e-35 Score=312.66 Aligned_cols=202 Identities=28% Similarity=0.310 Sum_probs=166.4
Q ss_pred cccccccccccCcccccceEEEEeC-CCchhhhHHhHhh--hhhHHHHHHHHHHHHhcCCCCceeEEEEeecccc-CCCC
Q 005045 387 STDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQ--QQGALKSFIDECNALKSTRHRNILRVITACSSVD-LEGN 462 (717)
Q Consensus 387 ~~~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~-~~~~ 462 (717)
..++|++.+.||+|+||.||+|.+. +|+.||+|++... .......+.+|+.+++.++||||+++++++.... ....
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 98 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEF 98 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcccc
Confidence 4679999999999999999999965 7899999998643 2334567789999999999999999999864322 1223
Q ss_pred ceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEe
Q 005045 463 DFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVG 542 (717)
Q Consensus 463 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~ 542 (717)
...|+||||++ +++.+.+. ..++...+..++.||+.||+|||+. +|+||||||+||+++.+|.+||+
T Consensus 99 ~~~~lv~e~~~-~~l~~~~~---------~~~~~~~~~~~~~qi~~~L~~LH~~---~ivHrDlkp~NIl~~~~~~~kl~ 165 (359)
T cd07876 99 QDVYLVMELMD-ANLCQVIH---------MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKIL 165 (359)
T ss_pred ceeEEEEeCCC-cCHHHHHh---------ccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEe
Confidence 45799999996 46766654 3478888999999999999999998 99999999999999999999999
Q ss_pred eeccchhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHhCCCCCCCC
Q 005045 543 DFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRPTGDM 609 (717)
Q Consensus 543 Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~ 609 (717)
|||.+..... ........++..|+|||++.+ .++.++|||||||++|+|++|..||...
T Consensus 166 Dfg~a~~~~~--------~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~ 225 (359)
T cd07876 166 DFGLARTACT--------NFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGT 225 (359)
T ss_pred cCCCcccccc--------CccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCC
Confidence 9999875411 111223468899999999765 5899999999999999999999999765
No 123
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=1.9e-35 Score=302.44 Aligned_cols=262 Identities=26% Similarity=0.397 Sum_probs=197.6
Q ss_pred ccccccccccccCcccccceEEEEeC------CCchhhhHHhHhhh-hhHHHHHHHHHHHHhcCCCCceeEEEEeecccc
Q 005045 386 KSTDNFSKENLIGTGSFGSVYKGTLG------DGTIVAIKVLKLQQ-QGALKSFIDECNALKSTRHRNILRVITACSSVD 458 (717)
Q Consensus 386 ~~~~~y~~~~~ig~g~~g~v~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~ 458 (717)
...++|.+.+.||+|++|.||.|.+. .+..|++|...... ......+..|+.+++.++|+||+++++++..
T Consensus 3 ~~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-- 80 (277)
T cd05036 3 VPRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFE-- 80 (277)
T ss_pred CCHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEcc--
Confidence 35678999999999999999999964 35678899876443 3334668889999999999999999998543
Q ss_pred CCCCceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCC-
Q 005045 459 LEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDM- 537 (717)
Q Consensus 459 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~- 537 (717)
....++||||+++++|.+++............+++..++.++.||+.|++|||+. +++||||+|+||+++.++
T Consensus 81 ---~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~nil~~~~~~ 154 (277)
T cd05036 81 ---RLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEEN---HFIHRDIAARNCLLTCKGP 154 (277)
T ss_pred ---CCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchheEEEeccCC
Confidence 3467999999999999999875532222224689999999999999999999997 999999999999998655
Q ss_pred --ceEEeeeccchhcccccCCCCCCcceeecccccccccCCCccC-CCCCcccchhhHHHHHHHHHh-CCCCCCCCCCCc
Q 005045 538 --TAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMN-GQVSILGDIYSYGILLLEMFT-GKRPTGDMFKDD 613 (717)
Q Consensus 538 --~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~ 613 (717)
.+||+|||.+....... ..........+..|+|||++. +.++.++|||||||++|+|++ |..||.......
T Consensus 155 ~~~~kl~dfg~~~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~ 229 (277)
T cd05036 155 GRVAKIADFGMARDIYRAS-----YYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQE 229 (277)
T ss_pred CcceEeccCccccccCCcc-----ceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH
Confidence 69999999988652111 011111222356799999964 568999999999999999997 999987542211
Q ss_pred hhhhHHHHhcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCC
Q 005045 614 FSIHMFVSMALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERI 693 (717)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp 693 (717)
.... +....... .+..++..+.+++.+|++.+|++||
T Consensus 230 --~~~~------------~~~~~~~~-----------------------------~~~~~~~~~~~~i~~cl~~~p~~Rp 266 (277)
T cd05036 230 --VMEF------------VTGGGRLD-----------------------------PPKGCPGPVYRIMTDCWQHTPEDRP 266 (277)
T ss_pred --HHHH------------HHcCCcCC-----------------------------CCCCCCHHHHHHHHHHcCCCcccCc
Confidence 1111 10000000 0112255688999999999999999
Q ss_pred CHHHHHHHHH
Q 005045 694 AMNVVVNNLK 703 (717)
Q Consensus 694 s~~eil~~l~ 703 (717)
|+.||++.|.
T Consensus 267 s~~~vl~~l~ 276 (277)
T cd05036 267 NFATILERIQ 276 (277)
T ss_pred CHHHHHHHhh
Confidence 9999999875
No 124
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=1.3e-35 Score=310.06 Aligned_cols=193 Identities=28% Similarity=0.409 Sum_probs=162.0
Q ss_pred cccCcccccceEEEEeC-CCchhhhHHhHhhh---hhHHHHHHHHHHHHhcC-CCCceeEEEEeeccccCCCCceEEEEE
Q 005045 395 NLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQ---QGALKSFIDECNALKST-RHRNILRVITACSSVDLEGNDFKALVF 469 (717)
Q Consensus 395 ~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~~~~~~~~~~lv~ 469 (717)
++||+|+||.||+|+.+ +++.||+|++.... ......+..|.++++.+ +||+|+++++++ ...+..|+||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~-----~~~~~~~lv~ 75 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCF-----QTKDRLFFVM 75 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEE-----EcCCeEEEEE
Confidence 46899999999999965 68899999987542 23445677888888866 899999999984 4456899999
Q ss_pred ecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeeccchh
Q 005045 470 EFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKF 549 (717)
Q Consensus 470 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~ 549 (717)
||+++++|.+++... ..+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||.+..
T Consensus 76 E~~~~~~L~~~l~~~-------~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~Nill~~~~~~kL~Dfg~~~~ 145 (321)
T cd05591 76 EYVNGGDLMFQIQRS-------RKFDEPRSRFYAAEVTLALMFLHRH---GVIYRDLKLDNILLDAEGHCKLADFGMCKE 145 (321)
T ss_pred eCCCCCcHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeeccccee
Confidence 999999999988754 5688999999999999999999998 999999999999999999999999999875
Q ss_pred cccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHhCCCCCCCC
Q 005045 550 LFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRPTGDM 609 (717)
Q Consensus 550 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~ 609 (717)
... .........|++.|+|||++.+ .++.++|||||||++|+|++|+.||...
T Consensus 146 ~~~-------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~ 199 (321)
T cd05591 146 GIL-------NGVTTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEAD 199 (321)
T ss_pred ccc-------CCccccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCC
Confidence 311 1111233568999999999765 5899999999999999999999999754
No 125
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=2.8e-35 Score=299.84 Aligned_cols=257 Identities=27% Similarity=0.474 Sum_probs=197.5
Q ss_pred ccccccccccCcccccceEEEEeC-CCc---hhhhHHhHhh-hhhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCC
Q 005045 388 TDNFSKENLIGTGSFGSVYKGTLG-DGT---IVAIKVLKLQ-QQGALKSFIDECNALKSTRHRNILRVITACSSVDLEGN 462 (717)
Q Consensus 388 ~~~y~~~~~ig~g~~g~v~~~~~~-~~~---~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~ 462 (717)
.++|+..+.||+|++|.||+|..+ +++ .+++|.+... .....+.+..|++++++++|+|++++.+.+ ...
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~ 78 (268)
T cd05063 4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVV-----TKF 78 (268)
T ss_pred hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEE-----ccC
Confidence 568899999999999999999965 333 6888888644 233456788999999999999999999985 344
Q ss_pred ceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEe
Q 005045 463 DFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVG 542 (717)
Q Consensus 463 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~ 542 (717)
+..++||||+++++|.+++.... ..+++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+
T Consensus 79 ~~~~lv~e~~~~~~L~~~~~~~~------~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nili~~~~~~kl~ 149 (268)
T cd05063 79 KPAMIITEYMENGALDKYLRDHD------GEFSSYQLVGMLRGIAAGMKYLSDM---NYVHRDLAARNILVNSNLECKVS 149 (268)
T ss_pred CCcEEEEEcCCCCCHHHHHHhcC------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEEcCCCcEEEC
Confidence 57899999999999999986532 4688999999999999999999997 99999999999999999999999
Q ss_pred eeccchhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHh-CCCCCCCCCCCchhhhHHH
Q 005045 543 DFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFT-GKRPTGDMFKDDFSIHMFV 620 (717)
Q Consensus 543 Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~ 620 (717)
|||.+........ ..........+..|+|||++.+ .++.++|||||||++|+|++ |..||......+ .....
T Consensus 150 dfg~~~~~~~~~~----~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~--~~~~i 223 (268)
T cd05063 150 DFGLSRVLEDDPE----GTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHE--VMKAI 223 (268)
T ss_pred CCccceecccccc----cceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHH--HHHHH
Confidence 9999876522111 0111111223457999999654 58899999999999999998 999986432211 11110
Q ss_pred HhcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHH
Q 005045 621 SMALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVN 700 (717)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~ 700 (717)
. ..... +...+++..+.+++.+||+.+|++||++.+|++
T Consensus 224 ~------------~~~~~-----------------------------~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~ 262 (268)
T cd05063 224 N------------DGFRL-----------------------------PAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVN 262 (268)
T ss_pred h------------cCCCC-----------------------------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 0 00000 011123566789999999999999999999999
Q ss_pred HHHHH
Q 005045 701 NLKTI 705 (717)
Q Consensus 701 ~l~~i 705 (717)
.|+++
T Consensus 263 ~l~~~ 267 (268)
T cd05063 263 LLDKL 267 (268)
T ss_pred HHHhh
Confidence 99875
No 126
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=1.7e-35 Score=316.50 Aligned_cols=205 Identities=22% Similarity=0.358 Sum_probs=169.2
Q ss_pred ccccccccCcccccceEEEEeC-CCchhhhHHhHhhh---hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceE
Q 005045 390 NFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQ---QGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFK 465 (717)
Q Consensus 390 ~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~ 465 (717)
.|++++.||+|+||.||+|+.. +++.||+|++.... ......+..|++++++++|+||+++++.+ .+.+..
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~-----~~~~~~ 76 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSF-----QDKDNL 76 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEE-----ecCCEE
Confidence 6889999999999999999954 78899999986532 33456788999999999999999999995 445689
Q ss_pred EEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeec
Q 005045 466 ALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFG 545 (717)
Q Consensus 466 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg 545 (717)
++||||+++|+|.+++... ..+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 77 ~lv~E~~~gg~L~~~l~~~-------~~~~e~~~~~~~~qi~~aL~~LH~~---givHrDlKp~Nili~~~~~~kL~DFG 146 (381)
T cd05626 77 YFVMDYIPGGDMMSLLIRM-------EVFPEVLARFYIAELTLAIESVHKM---GFIHRDIKPDNILIDLDGHIKLTDFG 146 (381)
T ss_pred EEEEecCCCCcHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCcHHHEEECCCCCEEEeeCc
Confidence 9999999999999998754 5688999999999999999999997 99999999999999999999999999
Q ss_pred cchhcccccCCC----------------------------------------CCCcceeecccccccccCCCccCC-CCC
Q 005045 546 LAKFLFEISDNP----------------------------------------SKNQTVSIGLKGSIGYIPPEHMNG-QVS 584 (717)
Q Consensus 546 ~~~~~~~~~~~~----------------------------------------~~~~~~~~~~~~~~~y~aPE~~~~-~~~ 584 (717)
++.......... ...........||..|+|||++.+ .++
T Consensus 147 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~ 226 (381)
T cd05626 147 LCTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYT 226 (381)
T ss_pred CCcccccccccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCC
Confidence 875431100000 000001123569999999999655 489
Q ss_pred cccchhhHHHHHHHHHhCCCCCCCC
Q 005045 585 ILGDIYSYGILLLEMFTGKRPTGDM 609 (717)
Q Consensus 585 ~~sDvwslG~vl~elltg~~p~~~~ 609 (717)
.++|||||||++|||++|..||...
T Consensus 227 ~~~DiwSlG~il~elltG~~Pf~~~ 251 (381)
T cd05626 227 QLCDWWSVGVILFEMLVGQPPFLAP 251 (381)
T ss_pred CccceeehhhHHHHHHhCCCCCcCC
Confidence 9999999999999999999999764
No 127
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=1.3e-35 Score=309.63 Aligned_cols=193 Identities=29% Similarity=0.420 Sum_probs=161.7
Q ss_pred cccCcccccceEEEEeC-CCchhhhHHhHhhh---hhHHHHHHHHHHHHhcC-CCCceeEEEEeeccccCCCCceEEEEE
Q 005045 395 NLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQ---QGALKSFIDECNALKST-RHRNILRVITACSSVDLEGNDFKALVF 469 (717)
Q Consensus 395 ~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~~~~~~~~~~lv~ 469 (717)
+.||+|+||.||+|+.+ +++.||+|++.... ......+..|..+++.. .||||+++++++ ...+..|+||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~-----~~~~~~~iv~ 75 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCF-----QTPDRLFFVM 75 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEE-----EcCCEEEEEE
Confidence 46899999999999965 78899999886432 23456677888888876 799999999984 4456899999
Q ss_pred ecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeeccchh
Q 005045 470 EFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKF 549 (717)
Q Consensus 470 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~ 549 (717)
||+++++|.+++... ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++..
T Consensus 76 Ey~~~g~L~~~i~~~-------~~l~~~~~~~~~~ql~~~L~~lH~~---~ivH~dlkp~NIli~~~~~~kL~DfG~~~~ 145 (320)
T cd05590 76 EFVNGGDLMFHIQKS-------RRFDEARARFYAAEITSALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKE 145 (320)
T ss_pred cCCCCchHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeeCCCCee
Confidence 999999999988754 5689999999999999999999997 999999999999999999999999999864
Q ss_pred cccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHhCCCCCCCC
Q 005045 550 LFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRPTGDM 609 (717)
Q Consensus 550 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~ 609 (717)
... .........|++.|+|||++.+ .++.++|||||||++|+|++|..||...
T Consensus 146 ~~~-------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~ 199 (320)
T cd05590 146 GIF-------NGKTTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAE 199 (320)
T ss_pred cCc-------CCCcccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCC
Confidence 311 1111223568999999999765 4789999999999999999999999754
No 128
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=1.7e-35 Score=301.32 Aligned_cols=252 Identities=24% Similarity=0.343 Sum_probs=196.5
Q ss_pred ccccccccccCcccccceEEEEeC-CCchhhhHHhHhhhhhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceEE
Q 005045 388 TDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFKA 466 (717)
Q Consensus 388 ~~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~ 466 (717)
.++|++.+.||+|++|.||.|+.. +++.||+|+++.........+.+|+.+++.++||||+++++.+ ...+..+
T Consensus 8 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~-----~~~~~~~ 82 (267)
T cd06645 8 QEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSY-----LRRDKLW 82 (267)
T ss_pred HHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEE-----EeCCEEE
Confidence 458999999999999999999954 7889999998765444456678899999999999999999985 3445899
Q ss_pred EEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeecc
Q 005045 467 LVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGL 546 (717)
Q Consensus 467 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~ 546 (717)
+||||+++++|.+++... +.+++..++.++.|++.|++|||+. +++|+||||+||+++.++.++|+|||.
T Consensus 83 lv~e~~~~~~L~~~~~~~-------~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~~~~l~dfg~ 152 (267)
T cd06645 83 ICMEFCGGGSLQDIYHVT-------GPLSESQIAYVSRETLQGLYYLHSK---GKMHRDIKGANILLTDNGHVKLADFGV 152 (267)
T ss_pred EEEeccCCCcHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECccee
Confidence 999999999999998654 5689999999999999999999998 999999999999999999999999999
Q ss_pred chhcccccCCCCCCcceeecccccccccCCCccC----CCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHHHh
Q 005045 547 AKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMN----GQVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVSM 622 (717)
Q Consensus 547 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~----~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~ 622 (717)
+..... .........|+..|+|||++. +.++.++|||||||++|+|++|..||....+..... .....
T Consensus 153 ~~~~~~-------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~-~~~~~ 224 (267)
T cd06645 153 SAQITA-------TIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALF-LMTKS 224 (267)
T ss_pred eeEccC-------cccccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHH-hhhcc
Confidence 875421 111122346889999999862 347899999999999999999999986543211100 00000
Q ss_pred cCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHH
Q 005045 623 ALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVN 700 (717)
Q Consensus 623 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~ 700 (717)
.. ..+... ....++..+.+++.+|++.+|++|||++||++
T Consensus 225 ~~-------~~~~~~-------------------------------~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~ 264 (267)
T cd06645 225 NF-------QPPKLK-------------------------------DKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQ 264 (267)
T ss_pred CC-------CCCccc-------------------------------ccCCCCHHHHHHHHHHccCCchhCcCHHHHhc
Confidence 00 000000 00012345778999999999999999999875
No 129
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=1.9e-35 Score=299.66 Aligned_cols=256 Identities=25% Similarity=0.458 Sum_probs=200.0
Q ss_pred cccccccccccccCcccccceEEEEeCCCchhhhHHhHhhhhhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCce
Q 005045 385 SKSTDNFSKENLIGTGSFGSVYKGTLGDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDF 464 (717)
Q Consensus 385 ~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 464 (717)
....++|++.++||+|++|.||+|..++++.||+|.+...... ...+.+|+.++++++|+||+++++.+. .+.
T Consensus 2 ~~~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~~-~~~~~~E~~~l~~l~h~~i~~~~~~~~------~~~ 74 (260)
T cd05067 2 EVPRETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSMS-PEAFLAEANLMKQLQHPRLVRLYAVVT------QEP 74 (260)
T ss_pred ccchHHceeeeeeccCccceEEeeecCCCceEEEEEecCCCCc-HHHHHHHHHHHHhcCCcCeeeEEEEEc------cCC
Confidence 3456789999999999999999999888899999988754332 367889999999999999999988742 246
Q ss_pred EEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeee
Q 005045 465 KALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDF 544 (717)
Q Consensus 465 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Df 544 (717)
.+++|||+++++|.+++..... ..+++..+..++.|++.|++|||+. +++||||+|+||+++.++.++|+||
T Consensus 75 ~~~v~e~~~~~~L~~~~~~~~~-----~~~~~~~~~~i~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~df 146 (260)
T cd05067 75 IYIITEYMENGSLVDFLKTPEG-----IKLTINKLIDMAAQIAEGMAFIERK---NYIHRDLRAANILVSETLCCKIADF 146 (260)
T ss_pred cEEEEEcCCCCCHHHHHHhcCC-----CCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHHhEEEcCCCCEEEccC
Confidence 8999999999999999865421 4688999999999999999999997 9999999999999999999999999
Q ss_pred ccchhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHh-CCCCCCCCCCCchhhhHHHHh
Q 005045 545 GLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFT-GKRPTGDMFKDDFSIHMFVSM 622 (717)
Q Consensus 545 g~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~ 622 (717)
|.+...... .........++..|+|||++.+ .++.++|||||||++|++++ |..||....... .......
T Consensus 147 g~~~~~~~~------~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~--~~~~~~~ 218 (260)
T cd05067 147 GLARLIEDN------EYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPE--VIQNLER 218 (260)
T ss_pred cceeecCCC------CcccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHH--HHHHHHc
Confidence 998765211 1111122345678999999654 57899999999999999999 999997542211 1111100
Q ss_pred cCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHHHH
Q 005045 623 ALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVNNL 702 (717)
Q Consensus 623 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~~l 702 (717)
.. ... .+..++.++.+++.+|++.+|++|||++++++.|
T Consensus 219 ~~--------~~~---------------------------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l 257 (260)
T cd05067 219 GY--------RMP---------------------------------RPDNCPEELYELMRLCWKEKPEERPTFEYLRSVL 257 (260)
T ss_pred CC--------CCC---------------------------------CCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHh
Confidence 00 000 0111245688999999999999999999999998
Q ss_pred HH
Q 005045 703 KT 704 (717)
Q Consensus 703 ~~ 704 (717)
+.
T Consensus 258 ~~ 259 (260)
T cd05067 258 ED 259 (260)
T ss_pred hc
Confidence 75
No 130
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=1.5e-35 Score=310.51 Aligned_cols=193 Identities=26% Similarity=0.402 Sum_probs=162.9
Q ss_pred cccCcccccceEEEEeC-CCchhhhHHhHhhh---hhHHHHHHHHHHHHhcC-CCCceeEEEEeeccccCCCCceEEEEE
Q 005045 395 NLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQ---QGALKSFIDECNALKST-RHRNILRVITACSSVDLEGNDFKALVF 469 (717)
Q Consensus 395 ~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~~~~~~~~~~lv~ 469 (717)
+.||+|+||.||+|.++ +++.||+|+++... ......+..|..+++.+ +||||+++++++ ......|+||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~-----~~~~~~~lv~ 75 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCF-----QTESRLFFVI 75 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEE-----EcCCEEEEEE
Confidence 46899999999999965 78899999987542 23456678899999988 799999999984 4456899999
Q ss_pred ecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeeccchh
Q 005045 470 EFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKF 549 (717)
Q Consensus 470 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~ 549 (717)
||+++++|.+++... ..+++..+..++.||+.||+|||+. +++||||||+||+++.++.+||+|||.+..
T Consensus 76 e~~~~g~L~~~~~~~-------~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~ 145 (329)
T cd05588 76 EFVSGGDLMFHMQRQ-------RKLPEEHARFYSAEISLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGMCKE 145 (329)
T ss_pred eCCCCCCHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEECcCccccc
Confidence 999999999888654 5689999999999999999999997 999999999999999999999999999864
Q ss_pred cccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHhCCCCCCCC
Q 005045 550 LFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRPTGDM 609 (717)
Q Consensus 550 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~ 609 (717)
... .........|+..|+|||++.+ .++.++|||||||++|+|++|..||...
T Consensus 146 ~~~-------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~ 199 (329)
T cd05588 146 GIR-------PGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIV 199 (329)
T ss_pred ccc-------CCCccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccc
Confidence 211 1112223568999999999765 4789999999999999999999999643
No 131
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=1e-35 Score=318.15 Aligned_cols=206 Identities=23% Similarity=0.342 Sum_probs=169.3
Q ss_pred cccccccccCcccccceEEEEeC-CCchhhhHHhHhhh---hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCce
Q 005045 389 DNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQ---QGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDF 464 (717)
Q Consensus 389 ~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 464 (717)
++|++.++||+|+||.||+|+.+ +++.||+|++.... ......+.+|++++++++|+||+++++.+ .+++.
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~-----~~~~~ 75 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSF-----QDKDN 75 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEE-----EcCCE
Confidence 47999999999999999999965 78999999886432 23356688999999999999999999884 45568
Q ss_pred EEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeee
Q 005045 465 KALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDF 544 (717)
Q Consensus 465 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Df 544 (717)
.|+||||+++++|.+++... +.+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 76 ~~lv~E~~~~g~L~~~i~~~-------~~~~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nill~~~~~ikL~DF 145 (376)
T cd05598 76 LYFVMDYIPGGDMMSLLIRL-------GIFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDF 145 (376)
T ss_pred EEEEEeCCCCCcHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHEEECCCCCEEEEeC
Confidence 99999999999999999754 5688999999999999999999998 9999999999999999999999999
Q ss_pred ccchhcccccCC------------------------------------CCCCcceeecccccccccCCCccCC-CCCccc
Q 005045 545 GLAKFLFEISDN------------------------------------PSKNQTVSIGLKGSIGYIPPEHMNG-QVSILG 587 (717)
Q Consensus 545 g~~~~~~~~~~~------------------------------------~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~s 587 (717)
|++..+...... ............||+.|+|||++.+ .++.++
T Consensus 146 G~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~ 225 (376)
T cd05598 146 GLCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLC 225 (376)
T ss_pred CCCccccccccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcce
Confidence 997532100000 0000001123569999999999765 489999
Q ss_pred chhhHHHHHHHHHhCCCCCCCC
Q 005045 588 DIYSYGILLLEMFTGKRPTGDM 609 (717)
Q Consensus 588 DvwslG~vl~elltg~~p~~~~ 609 (717)
|||||||++|+|++|+.||...
T Consensus 226 DiwSlGvilyell~G~~Pf~~~ 247 (376)
T cd05598 226 DWWSVGVILYEMLVGQPPFLAD 247 (376)
T ss_pred eeeeccceeeehhhCCCCCCCC
Confidence 9999999999999999999764
No 132
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=4e-35 Score=298.98 Aligned_cols=258 Identities=22% Similarity=0.364 Sum_probs=200.7
Q ss_pred cccccccccccCcccccceEEEEeCC----CchhhhHHhHhhh-hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCC
Q 005045 387 STDNFSKENLIGTGSFGSVYKGTLGD----GTIVAIKVLKLQQ-QGALKSFIDECNALKSTRHRNILRVITACSSVDLEG 461 (717)
Q Consensus 387 ~~~~y~~~~~ig~g~~g~v~~~~~~~----~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~ 461 (717)
...+|++.+.||+|++|.||.|.+.+ ...|++|...... ....+.+.+|+.+++++.||||+++++.+..
T Consensus 4 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~----- 78 (270)
T cd05056 4 QREDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE----- 78 (270)
T ss_pred chhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-----
Confidence 45678999999999999999998542 2468888887554 4456788999999999999999999998632
Q ss_pred CceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEE
Q 005045 462 NDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHV 541 (717)
Q Consensus 462 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl 541 (717)
...++||||+++++|.+++.... ..+++..+..++.+++.|++|||+. +++||||||+||+++.++.++|
T Consensus 79 -~~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~~~l~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l 148 (270)
T cd05056 79 -NPVWIVMELAPLGELRSYLQVNK------YSLDLASLILYSYQLSTALAYLESK---RFVHRDIAARNVLVSSPDCVKL 148 (270)
T ss_pred -CCcEEEEEcCCCCcHHHHHHhCC------CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccChheEEEecCCCeEE
Confidence 35689999999999999997542 4589999999999999999999997 9999999999999999999999
Q ss_pred eeeccchhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHh-CCCCCCCCCCCchhhhHH
Q 005045 542 GDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFT-GKRPTGDMFKDDFSIHMF 619 (717)
Q Consensus 542 ~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~ 619 (717)
+|||.+....... ........++..|+|||.+.+ .++.++|||||||++|++++ |..||......+.. ..
T Consensus 149 ~d~g~~~~~~~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~--~~ 220 (270)
T cd05056 149 GDFGLSRYLEDES------YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVI--GR 220 (270)
T ss_pred ccCceeeeccccc------ceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHH--HH
Confidence 9999987652211 011112234567999999654 47899999999999999996 99999655322111 11
Q ss_pred HHhcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHH
Q 005045 620 VSMALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVV 699 (717)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil 699 (717)
.... . .. ..+..++..+.+++.+|+.++|++|||+.|++
T Consensus 221 ~~~~--------~--~~-------------------------------~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~ 259 (270)
T cd05056 221 IENG--------E--RL-------------------------------PMPPNCPPTLYSLMTKCWAYDPSKRPRFTELK 259 (270)
T ss_pred HHcC--------C--cC-------------------------------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHH
Confidence 0000 0 00 01122356788999999999999999999999
Q ss_pred HHHHHHHHH
Q 005045 700 NNLKTIRNC 708 (717)
Q Consensus 700 ~~l~~i~~~ 708 (717)
+.|++++.+
T Consensus 260 ~~l~~~~~~ 268 (270)
T cd05056 260 AQLSDILQE 268 (270)
T ss_pred HHHHHHHhc
Confidence 999998865
No 133
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=2.8e-35 Score=301.90 Aligned_cols=269 Identities=22% Similarity=0.398 Sum_probs=205.8
Q ss_pred cccccccccccccCcccccceEEEEeCC-----CchhhhHHhHhh-hhhHHHHHHHHHHHHhcCCCCceeEEEEeecccc
Q 005045 385 SKSTDNFSKENLIGTGSFGSVYKGTLGD-----GTIVAIKVLKLQ-QQGALKSFIDECNALKSTRHRNILRVITACSSVD 458 (717)
Q Consensus 385 ~~~~~~y~~~~~ig~g~~g~v~~~~~~~-----~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~ 458 (717)
....++|++.+.||+|+||.||.|.+.. +..|++|.+... .......+.+|+.+++.+.|+||+++++++.
T Consensus 2 ~~~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~--- 78 (280)
T cd05043 2 AISRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCI--- 78 (280)
T ss_pred ccchhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe---
Confidence 3456789999999999999999999654 678999987643 2344577889999999999999999999874
Q ss_pred CCCCceEEEEEecCCCCChhhhccCCCCC-cccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCC
Q 005045 459 LEGNDFKALVFEFMSNGNLDQWLHPSPAE-HYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDM 537 (717)
Q Consensus 459 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~-~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~ 537 (717)
..+...++++||+++++|.+++...... ......+++..+..++.|++.|++|||+. +++||||+|+||+++.++
T Consensus 79 -~~~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~i~H~di~p~nil~~~~~ 154 (280)
T cd05043 79 -EDGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKR---GVIHKDIAARNCVIDEEL 154 (280)
T ss_pred -cCCCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCHhhEEEcCCC
Confidence 3345789999999999999998653211 00114589999999999999999999997 999999999999999999
Q ss_pred ceEEeeeccchhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHh-CCCCCCCCCCCchh
Q 005045 538 TAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFT-GKRPTGDMFKDDFS 615 (717)
Q Consensus 538 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~ 615 (717)
.+||+|||+++.+..... ........++..|+|||++.+ .++.++|||||||++|++++ |+.||...... .
T Consensus 155 ~~kl~d~g~~~~~~~~~~-----~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--~ 227 (280)
T cd05043 155 QVKITDNALSRDLFPMDY-----HCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPF--E 227 (280)
T ss_pred cEEECCCCCcccccCCce-----EEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHH--H
Confidence 999999999976522111 111112335678999999654 47999999999999999999 99999654221 1
Q ss_pred hhHHHHhcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCH
Q 005045 616 IHMFVSMALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAM 695 (717)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~ 695 (717)
...+..... ... ....++..+.+++.+||+.+|++|||+
T Consensus 228 ~~~~~~~~~--------~~~---------------------------------~~~~~~~~~~~li~~~l~~~p~~Rps~ 266 (280)
T cd05043 228 MAAYLKDGY--------RLA---------------------------------QPINCPDELFAVMACCWALDPEERPSF 266 (280)
T ss_pred HHHHHHcCC--------CCC---------------------------------CCCcCCHHHHHHHHHHcCCChhhCCCH
Confidence 111111000 000 011235567899999999999999999
Q ss_pred HHHHHHHHHHHHH
Q 005045 696 NVVVNNLKTIRNC 708 (717)
Q Consensus 696 ~eil~~l~~i~~~ 708 (717)
.|+++.|+.+.++
T Consensus 267 ~~~~~~l~~~~~~ 279 (280)
T cd05043 267 SQLVQCLTDFHAQ 279 (280)
T ss_pred HHHHHHHHHHHhc
Confidence 9999999988754
No 134
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=4.5e-35 Score=299.49 Aligned_cols=247 Identities=22% Similarity=0.311 Sum_probs=187.1
Q ss_pred cCcccccceEEEEeC-CCchhhhHHhHhhh---hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceEEEEEecC
Q 005045 397 IGTGSFGSVYKGTLG-DGTIVAIKVLKLQQ---QGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFKALVFEFM 472 (717)
Q Consensus 397 ig~g~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~lv~e~~ 472 (717)
||+|+||.||+++.+ +|+.||+|.+.... ......+..|++++++++||||+++.+.+ ..+.+.++||||+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~-----~~~~~~~lv~e~~ 75 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAF-----ESKTHLCLVMSLM 75 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEE-----ecCCeEEEEEecC
Confidence 699999999999965 78999999886432 12234556799999999999999998884 4456899999999
Q ss_pred CCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeeccchhccc
Q 005045 473 SNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFE 552 (717)
Q Consensus 473 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 552 (717)
++++|.+++..... ..+++..+..++.||+.|++|||+. +++||||||+||+++.++.++|+|||.+.....
T Consensus 76 ~g~~L~~~~~~~~~-----~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~ 147 (277)
T cd05607 76 NGGDLKYHIYNVGE-----RGLEMERVIHYSAQITCGILHLHSM---DIVYRDMKPENVLLDDQGNCRLSDLGLAVELKD 147 (277)
T ss_pred CCCCHHHHHHhccc-----cCCCHHHHHHHHHHHHHHHHHHHHC---CEEEccCChHhEEEcCCCCEEEeeceeeeecCC
Confidence 99999988764421 4578899999999999999999997 999999999999999999999999999876521
Q ss_pred ccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHHHhcCChhhhhh
Q 005045 553 ISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVSMALPDHVMDI 631 (717)
Q Consensus 553 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 631 (717)
........|+..|+|||++.+ .++.++||||+||++|+|++|..||....... ...... ...
T Consensus 148 --------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~-~~~~~~--------~~~ 210 (277)
T cd05607 148 --------GKTITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKV-AKEELK--------RRT 210 (277)
T ss_pred --------CceeeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchh-hHHHHH--------HHh
Confidence 111223458899999999654 48999999999999999999999996542211 000000 001
Q ss_pred cCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHHHHH
Q 005045 632 LDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVNNLK 703 (717)
Q Consensus 632 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~~l~ 703 (717)
+...... ....++.++.+++.+||+.+|++||+++|+++.+.
T Consensus 211 ~~~~~~~------------------------------~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~~ 252 (277)
T cd05607 211 LEDEVKF------------------------------EHQNFTEESKDICRLFLAKKPEDRLGSREKNDDPR 252 (277)
T ss_pred hcccccc------------------------------ccccCCHHHHHHHHHHhccCHhhCCCCccchhhhh
Confidence 1101000 00112456789999999999999999987764443
No 135
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=3.7e-35 Score=301.38 Aligned_cols=251 Identities=24% Similarity=0.314 Sum_probs=193.8
Q ss_pred ccccccccCcccccceEEEEeC-CCchhhhHHhHhhh---hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceE
Q 005045 390 NFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQ---QGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFK 465 (717)
Q Consensus 390 ~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~ 465 (717)
+|++.++||+|+||.||++... +++.||+|++.... ......+.+|+.+++.++||||+++++.+ ..++..
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~~~~ 75 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAY-----ETKDAL 75 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeee-----cCCCeE
Confidence 4889999999999999999964 78999999886432 22335577899999999999999999884 445689
Q ss_pred EEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeec
Q 005045 466 ALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFG 545 (717)
Q Consensus 466 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg 545 (717)
++||||+++++|.+++..... ..+++..+..++.|++.|+.|||+. +++||||+|+||+++.++.++|+|||
T Consensus 76 ~lv~e~~~~~~L~~~~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~Dfg 147 (285)
T cd05605 76 CLVLTLMNGGDLKFHIYNMGN-----PGFDEERAVFYAAEITCGLEDLHRE---RIVYRDLKPENILLDDYGHIRISDLG 147 (285)
T ss_pred EEEEeccCCCcHHHHHHhcCc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHEEECCCCCEEEeeCC
Confidence 999999999999988764321 4589999999999999999999997 99999999999999999999999999
Q ss_pred cchhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHHHhcC
Q 005045 546 LAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVSMAL 624 (717)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~ 624 (717)
.+..... ........|+..|+|||++.+ .++.++||||+||++|+|++|..||........ . ....
T Consensus 148 ~~~~~~~--------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~-~-~~~~--- 214 (285)
T cd05605 148 LAVEIPE--------GETIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVK-R-EEVE--- 214 (285)
T ss_pred CceecCC--------CCccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhH-H-HHHH---
Confidence 9875411 011123458899999999654 588999999999999999999999975322110 0 0000
Q ss_pred ChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCC-----CHHHHH
Q 005045 625 PDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERI-----AMNVVV 699 (717)
Q Consensus 625 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp-----s~~eil 699 (717)
..+..... ..+...+..+.+++.+||+.+|++|| ++++++
T Consensus 215 -----~~~~~~~~------------------------------~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~ 259 (285)
T cd05605 215 -----RRVKEDQE------------------------------EYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVK 259 (285)
T ss_pred -----HHhhhccc------------------------------ccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHh
Confidence 00000000 01122355678999999999999999 888887
Q ss_pred HH
Q 005045 700 NN 701 (717)
Q Consensus 700 ~~ 701 (717)
+.
T Consensus 260 ~~ 261 (285)
T cd05605 260 AH 261 (285)
T ss_pred cC
Confidence 64
No 136
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=3.2e-35 Score=312.43 Aligned_cols=206 Identities=23% Similarity=0.370 Sum_probs=170.9
Q ss_pred cccccccccCcccccceEEEEeC-CCchhhhHHhHhhh---hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCce
Q 005045 389 DNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQ---QGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDF 464 (717)
Q Consensus 389 ~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 464 (717)
++|++.+.||+|+||.||+|..+ +++.||+|++.... ......+..|+.++.+++|++|+++++.+ .+...
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~-----~~~~~ 75 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSF-----QDKLN 75 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEE-----ecCCe
Confidence 47999999999999999999965 78999999986432 33456788899999999999999999984 45568
Q ss_pred EEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeee
Q 005045 465 KALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDF 544 (717)
Q Consensus 465 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Df 544 (717)
.|+||||+++|+|.+++... +.+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 76 ~~lv~E~~~gg~L~~~l~~~-------~~l~~~~~~~~~~qi~~aL~~lH~~---givHrDlKp~NILi~~~~~vkL~DF 145 (363)
T cd05628 76 LYLIMEFLPGGDMMTLLMKK-------DTLTEEETQFYIAETVLAIDSIHQL---GFIHRDIKPDNLLLDSKGHVKLSDF 145 (363)
T ss_pred EEEEEcCCCCCcHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCCEEEeec
Confidence 99999999999999998754 5689999999999999999999997 9999999999999999999999999
Q ss_pred ccchhcccccCCCC----------------------------CCcceeecccccccccCCCccCC-CCCcccchhhHHHH
Q 005045 545 GLAKFLFEISDNPS----------------------------KNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGIL 595 (717)
Q Consensus 545 g~~~~~~~~~~~~~----------------------------~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~v 595 (717)
|++........... ..........||+.|+|||++.+ .++.++|||||||+
T Consensus 146 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvi 225 (363)
T cd05628 146 GLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVI 225 (363)
T ss_pred cCcccccccccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHH
Confidence 99875422110000 00000123569999999999655 58999999999999
Q ss_pred HHHHHhCCCCCCCC
Q 005045 596 LLEMFTGKRPTGDM 609 (717)
Q Consensus 596 l~elltg~~p~~~~ 609 (717)
+|||++|..||...
T Consensus 226 l~ell~G~~Pf~~~ 239 (363)
T cd05628 226 MYEMLIGYPPFCSE 239 (363)
T ss_pred HHHHHhCCCCCCCC
Confidence 99999999999754
No 137
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=5.9e-35 Score=299.04 Aligned_cols=257 Identities=25% Similarity=0.436 Sum_probs=196.1
Q ss_pred ccccccccccCcccccceEEEEeC-CCc----hhhhHHhHhhh-hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCC
Q 005045 388 TDNFSKENLIGTGSFGSVYKGTLG-DGT----IVAIKVLKLQQ-QGALKSFIDECNALKSTRHRNILRVITACSSVDLEG 461 (717)
Q Consensus 388 ~~~y~~~~~ig~g~~g~v~~~~~~-~~~----~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~ 461 (717)
.++|++.+.||+|+||.||+|.+. +++ .+++|.+.... ......+..|+..++++.||||+++++++.
T Consensus 6 ~~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~------ 79 (279)
T cd05111 6 ETELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICP------ 79 (279)
T ss_pred HhhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEEC------
Confidence 357899999999999999999964 454 47777775332 233466778888999999999999999853
Q ss_pred CceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEE
Q 005045 462 NDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHV 541 (717)
Q Consensus 462 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl 541 (717)
....++++||+++++|.+++.... ..+++..+..++.||+.|++|||+. +++||||||+||+++.++.+||
T Consensus 80 ~~~~~~i~e~~~~gsL~~~l~~~~------~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~kl 150 (279)
T cd05111 80 GASLQLVTQLSPLGSLLDHVRQHR------DSLDPQRLLNWCVQIAKGMYYLEEH---RMVHRNLAARNILLKSDSIVQI 150 (279)
T ss_pred CCccEEEEEeCCCCcHHHHHHhcc------cCCCHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEE
Confidence 235689999999999999997542 4689999999999999999999997 9999999999999999999999
Q ss_pred eeeccchhcccccCCCCCCcceeecccccccccCCCccC-CCCCcccchhhHHHHHHHHHh-CCCCCCCCCCCchhhhHH
Q 005045 542 GDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMN-GQVSILGDIYSYGILLLEMFT-GKRPTGDMFKDDFSIHMF 619 (717)
Q Consensus 542 ~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~ 619 (717)
+|||.++...... .........++..|+|||.+. +.++.++|||||||++||+++ |..||.+..... ..
T Consensus 151 ~Dfg~~~~~~~~~-----~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~--~~-- 221 (279)
T cd05111 151 ADFGVADLLYPDD-----KKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHE--VP-- 221 (279)
T ss_pred cCCccceeccCCC-----cccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH--HH--
Confidence 9999997652111 111122344677899999964 568999999999999999998 999986542211 11
Q ss_pred HHhcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHH
Q 005045 620 VSMALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVV 699 (717)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil 699 (717)
+.+....... .+..|+..+.+++.+||+.+|++|||+.|++
T Consensus 222 ----------~~~~~~~~~~-----------------------------~~~~~~~~~~~li~~c~~~~p~~Rps~~el~ 262 (279)
T cd05111 222 ----------DLLEKGERLA-----------------------------QPQICTIDVYMVMVKCWMIDENVRPTFKELA 262 (279)
T ss_pred ----------HHHHCCCcCC-----------------------------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHH
Confidence 1111000000 0011234567899999999999999999999
Q ss_pred HHHHHHHH
Q 005045 700 NNLKTIRN 707 (717)
Q Consensus 700 ~~l~~i~~ 707 (717)
+.+..+.+
T Consensus 263 ~~l~~~~~ 270 (279)
T cd05111 263 NEFTRMAR 270 (279)
T ss_pred HHHHHHHh
Confidence 99988765
No 138
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=6.8e-35 Score=298.64 Aligned_cols=247 Identities=23% Similarity=0.310 Sum_probs=187.8
Q ss_pred cCcccccceEEEEeC-CCchhhhHHhHhhh---hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceEEEEEecC
Q 005045 397 IGTGSFGSVYKGTLG-DGTIVAIKVLKLQQ---QGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFKALVFEFM 472 (717)
Q Consensus 397 ig~g~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~lv~e~~ 472 (717)
||+|+||.||.+.++ +++.||+|.+.... ......+..|+++++.++|++|+++.+++ ......++||||+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~-----~~~~~~~lv~e~~ 75 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAF-----QTKTDLCLVMTIM 75 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEE-----cCCCeEEEEEeCC
Confidence 699999999999965 78899999986442 22335677899999999999999998884 4456899999999
Q ss_pred CCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeeccchhccc
Q 005045 473 SNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFE 552 (717)
Q Consensus 473 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 552 (717)
++++|.+++..... ....+++..+..++.||+.||+|||+. +|+||||||+||+++.++.++|+|||.+.....
T Consensus 76 ~~g~L~~~~~~~~~---~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~ 149 (280)
T cd05608 76 NGGDLRYHIYNVDE---ENPGFPEPRACFYTAQIISGLEHLHQR---RIIYRDLKPENVLLDNDGNVRISDLGLAVELKD 149 (280)
T ss_pred CCCCHHHHHHhccc---cCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCccceecCC
Confidence 99999887743211 114689999999999999999999997 999999999999999999999999999875421
Q ss_pred ccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHHHhcCChhhhhh
Q 005045 553 ISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVSMALPDHVMDI 631 (717)
Q Consensus 553 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 631 (717)
. ........|++.|+|||++.+ .++.++|||||||++|+|++|+.||........ ..... ...
T Consensus 150 ~-------~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~-~~~~~--------~~~ 213 (280)
T cd05608 150 G-------QSKTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVE-NKELK--------QRI 213 (280)
T ss_pred C-------CccccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchh-HHHHH--------Hhh
Confidence 1 111223568899999999655 588999999999999999999999975422110 00000 000
Q ss_pred cCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCC-----CHHHHHHH
Q 005045 632 LDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERI-----AMNVVVNN 701 (717)
Q Consensus 632 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp-----s~~eil~~ 701 (717)
...... .+..++..+.+++.+||+.+|++|| +++|+++.
T Consensus 214 ~~~~~~-------------------------------~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h 257 (280)
T cd05608 214 LNDSVT-------------------------------YPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTH 257 (280)
T ss_pred cccCCC-------------------------------CcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcC
Confidence 000000 1112356678999999999999999 67777753
No 139
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=1.5e-35 Score=314.60 Aligned_cols=207 Identities=23% Similarity=0.348 Sum_probs=173.0
Q ss_pred cccccccccccccccccCcccccceEEEEeC-CCchhhhHHhHhh---hhhHHHHHHHHHHHHhcCCCCceeEEEEeecc
Q 005045 381 YSDISKSTDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQ---QQGALKSFIDECNALKSTRHRNILRVITACSS 456 (717)
Q Consensus 381 ~~~~~~~~~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~ 456 (717)
+..+....++|++.+.||+|+||.||+|.++ +++.||+|++... .......+.+|+.+++.++||||+++++.+
T Consensus 35 ~~~~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~-- 112 (370)
T cd05621 35 IRKLQMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAF-- 112 (370)
T ss_pred HHhcCCCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEE--
Confidence 3445566789999999999999999999965 6888999987542 222345678899999999999999999984
Q ss_pred ccCCCCceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCC
Q 005045 457 VDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKD 536 (717)
Q Consensus 457 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~ 536 (717)
.++...|+||||+++|+|.+++.. ..+++..+..++.||+.||+|||+. +|+||||||+||+++.+
T Consensus 113 ---~~~~~~~lv~Ey~~gg~L~~~l~~--------~~~~~~~~~~~~~qil~aL~~LH~~---~IvHrDLKp~NILl~~~ 178 (370)
T cd05621 113 ---QDDKYLYMVMEYMPGGDLVNLMSN--------YDVPEKWAKFYTAEVVLALDAIHSM---GLIHRDVKPDNMLLDKH 178 (370)
T ss_pred ---EcCCEEEEEEcCCCCCcHHHHHHh--------cCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCC
Confidence 455689999999999999999864 3478889999999999999999997 99999999999999999
Q ss_pred CceEEeeeccchhcccccCCCCCCcceeecccccccccCCCccCC-----CCCcccchhhHHHHHHHHHhCCCCCCCC
Q 005045 537 MTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-----QVSILGDIYSYGILLLEMFTGKRPTGDM 609 (717)
Q Consensus 537 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-----~~~~~sDvwslG~vl~elltg~~p~~~~ 609 (717)
+.+||+|||.+...... .........||+.|+|||++.+ .++.++||||+||++|+|++|..||...
T Consensus 179 ~~~kL~DFG~a~~~~~~------~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~ 250 (370)
T cd05621 179 GHLKLADFGTCMKMDET------GMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYAD 250 (370)
T ss_pred CCEEEEecccceecccC------CceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCC
Confidence 99999999998765211 1111234569999999999653 2688999999999999999999999654
No 140
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=2.5e-36 Score=305.39 Aligned_cols=249 Identities=31% Similarity=0.524 Sum_probs=187.5
Q ss_pred cccccCcccccceEEEEeC-----CCchhhhHHhHhhh-hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceEE
Q 005045 393 KENLIGTGSFGSVYKGTLG-----DGTIVAIKVLKLQQ-QGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFKA 466 (717)
Q Consensus 393 ~~~~ig~g~~g~v~~~~~~-----~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~ 466 (717)
+.+.||.|.||.||+|.+. .+..|+||.++... ....+.+.+|++.+++++||||+++++++. ..+..+
T Consensus 3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~-----~~~~~~ 77 (259)
T PF07714_consen 3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCI-----ENEPLF 77 (259)
T ss_dssp EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEE-----SSSSEE
T ss_pred EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeeccccccccccccccccccccc-----cccccc
Confidence 5678999999999999965 36679999996542 334788999999999999999999999975 334689
Q ss_pred EEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeecc
Q 005045 467 LVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGL 546 (717)
Q Consensus 467 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~ 546 (717)
+||||+++|+|.+++..... ..+++..+..|+.||+.||+|||+. +++||+|+++||+++.++.+||+|||.
T Consensus 78 lv~e~~~~g~L~~~L~~~~~-----~~~~~~~~~~i~~~i~~~l~~Lh~~---~iiH~~l~~~nill~~~~~~Kl~~f~~ 149 (259)
T PF07714_consen 78 LVMEYCPGGSLDDYLKSKNK-----EPLSEQQRLSIAIQIAEALSYLHSN---NIIHGNLSPSNILLDSNGQVKLSDFGL 149 (259)
T ss_dssp EEEE--TTEBHHHHHHHTCT-----TTSBHHHHHHHHHHHHHHHHHHHHT---TEEEST-SGGGEEEETTTEEEEESTTT
T ss_pred cccccccccccccccccccc-----ccccccccccccccccccccccccc---ccccccccccccccccccccccccccc
Confidence 99999999999999986511 5689999999999999999999997 999999999999999999999999999
Q ss_pred chhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHh-CCCCCCCCCCCchhhhHHHHhcC
Q 005045 547 AKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFT-GKRPTGDMFKDDFSIHMFVSMAL 624 (717)
Q Consensus 547 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 624 (717)
+...... ..............|+|||.+.+ .++.++||||||+++||+++ |..||....... ........
T Consensus 150 ~~~~~~~-----~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~--~~~~~~~~- 221 (259)
T PF07714_consen 150 SRPISEK-----SKYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEE--IIEKLKQG- 221 (259)
T ss_dssp GEETTTS-----SSEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHH--HHHHHHTT-
T ss_pred ccccccc-----ccccccccccccccccccccccccccccccccccccccccccccccccccccccccc--cccccccc-
Confidence 8765111 11122223346778999999754 48999999999999999999 788986542211 11111000
Q ss_pred ChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHHHH
Q 005045 625 PDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVNNL 702 (717)
Q Consensus 625 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~~l 702 (717)
. ..+.+..++..+.+++.+||..+|++|||++||++.|
T Consensus 222 ----------~------------------------------~~~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 222 ----------Q------------------------------RLPIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp ----------E------------------------------ETTSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred ----------c------------------------------cceeccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 0 0011223466788999999999999999999999876
No 141
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=1.5e-35 Score=310.18 Aligned_cols=192 Identities=26% Similarity=0.401 Sum_probs=161.6
Q ss_pred cccCcccccceEEEEeC-CCchhhhHHhHhh---hhhHHHHHHHHHHHHhcC-CCCceeEEEEeeccccCCCCceEEEEE
Q 005045 395 NLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQ---QQGALKSFIDECNALKST-RHRNILRVITACSSVDLEGNDFKALVF 469 (717)
Q Consensus 395 ~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~~~~~~~~~~lv~ 469 (717)
+.||+|+||.||+|+.+ +++.||+|++... .......+..|+.++.++ +||||+++++++ ...+..++||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~-----~~~~~~~lv~ 75 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCF-----QTESRLFFVI 75 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEE-----EeCCEEEEEE
Confidence 46899999999999965 7889999998754 233456677888888877 899999999984 4456899999
Q ss_pred ecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeeccchh
Q 005045 470 EFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKF 549 (717)
Q Consensus 470 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~ 549 (717)
||+++++|.+++... ..+++..++.++.||+.||+|||+. +|+||||||+||+++.++.+||+|||++..
T Consensus 76 E~~~~~~L~~~~~~~-------~~l~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dikp~Nili~~~~~~kL~DfG~~~~ 145 (329)
T cd05618 76 EYVNGGDLMFHMQRQ-------RKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKE 145 (329)
T ss_pred eCCCCCCHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCCEEEeeCCcccc
Confidence 999999999888654 5689999999999999999999997 999999999999999999999999999875
Q ss_pred cccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHhCCCCCCC
Q 005045 550 LFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRPTGD 608 (717)
Q Consensus 550 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~elltg~~p~~~ 608 (717)
.... ........|++.|+|||++.+ .++.++|||||||++|+|++|..||..
T Consensus 146 ~~~~-------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~ 198 (329)
T cd05618 146 GLRP-------GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI 198 (329)
T ss_pred ccCC-------CCccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCcc
Confidence 3111 111223568999999999765 478999999999999999999999964
No 142
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=5.9e-35 Score=298.34 Aligned_cols=263 Identities=24% Similarity=0.426 Sum_probs=198.0
Q ss_pred cccccccCcccccceEEEEeC----CCchhhhHHhHhhh--hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccC-CCCc
Q 005045 391 FSKENLIGTGSFGSVYKGTLG----DGTIVAIKVLKLQQ--QGALKSFIDECNALKSTRHRNILRVITACSSVDL-EGND 463 (717)
Q Consensus 391 y~~~~~ig~g~~g~v~~~~~~----~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~-~~~~ 463 (717)
|.+.+.+|+|+||.||.|... .+..||+|.++... ......+..|++.++.++||||+++++.+..... ....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 578899999999999999854 24679999887542 2345678899999999999999999998654331 2334
Q ss_pred eEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEee
Q 005045 464 FKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGD 543 (717)
Q Consensus 464 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~D 543 (717)
..+++|||+++++|.+++...... .....+++..+..++.|++.||+|||+. +++||||||+||++++++.+||+|
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~-~~~~~~~~~~~~~~~~~i~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~d 156 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLG-GLPEKLPLQTLLKFMVDIALGMEYLSNR---NFIHRDLAARNCMLREDMTVCVAD 156 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhcc-CCcccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchheEEECCCCeEEECC
Confidence 579999999999999888543211 1124689999999999999999999997 999999999999999999999999
Q ss_pred eccchhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHh-CCCCCCCCCCCchhhhHHHH
Q 005045 544 FGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFT-GKRPTGDMFKDDFSIHMFVS 621 (717)
Q Consensus 544 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~ 621 (717)
||.++........ .......++..|+|||.+.+ .++.++|||||||++|||++ |..||....... ......
T Consensus 157 fg~~~~~~~~~~~-----~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~--~~~~~~ 229 (273)
T cd05035 157 FGLSKKIYSGDYY-----RQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHE--IYDYLR 229 (273)
T ss_pred ccceeeccccccc-----cccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHHH
Confidence 9998865222111 11111234668999999755 48999999999999999999 888986542211 111110
Q ss_pred hcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHHH
Q 005045 622 MALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVNN 701 (717)
Q Consensus 622 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~~ 701 (717)
+..... .+..++..+.+++.+||+.+|.+|||+.|+++.
T Consensus 230 -----------~~~~~~------------------------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~ 268 (273)
T cd05035 230 -----------HGNRLK------------------------------QPEDCLDELYDLMYSCWRADPKDRPTFTKLREV 268 (273)
T ss_pred -----------cCCCCC------------------------------CCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 000000 112235678899999999999999999999999
Q ss_pred HHHH
Q 005045 702 LKTI 705 (717)
Q Consensus 702 l~~i 705 (717)
|+++
T Consensus 269 l~~~ 272 (273)
T cd05035 269 LENI 272 (273)
T ss_pred HHhh
Confidence 9875
No 143
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.6e-35 Score=298.38 Aligned_cols=256 Identities=23% Similarity=0.351 Sum_probs=200.6
Q ss_pred ccccccccccccccCcccccceEEEEeCCCchhhhHHhHhh--hhhHHHHHHHHHHHHhcC-CCCceeEEEEeeccccCC
Q 005045 384 ISKSTDNFSKENLIGTGSFGSVYKGTLGDGTIVAIKVLKLQ--QQGALKSFIDECNALKST-RHRNILRVITACSSVDLE 460 (717)
Q Consensus 384 ~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~~~~ 460 (717)
+......|++++.||+||.+.||++...+.+.+|+|.+... +......|.+|+..|.++ .|.+|++++++- -
T Consensus 356 i~Vkg~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYE-----v 430 (677)
T KOG0596|consen 356 IKVKGREYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYE-----V 430 (677)
T ss_pred EEECcchhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeee-----c
Confidence 34457789999999999999999999877788888877643 566678899999999999 689999999994 3
Q ss_pred CCceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceE
Q 005045 461 GNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAH 540 (717)
Q Consensus 461 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~k 540 (717)
.++.+|+||||= ..+|..+++... ..++...++.+-.||+.|+.++|.+ ||||.||||.|+++ -.|.+|
T Consensus 431 ~d~~lYmvmE~G-d~DL~kiL~k~~------~~~~~~~lk~ywkqML~aV~~IH~~---gIVHSDLKPANFLl-VkG~LK 499 (677)
T KOG0596|consen 431 TDGYLYMVMECG-DIDLNKILKKKK------SIDPDWFLKFYWKQMLLAVKTIHQH---GIVHSDLKPANFLL-VKGRLK 499 (677)
T ss_pred cCceEEEEeecc-cccHHHHHHhcc------CCCchHHHHHHHHHHHHHHHHHHHh---ceeecCCCcccEEE-EeeeEE
Confidence 356999999974 579999998653 3344347889999999999999998 99999999999998 468999
Q ss_pred EeeeccchhcccccCCCCCCcceeecccccccccCCCccCC------------CCCcccchhhHHHHHHHHHhCCCCCCC
Q 005045 541 VGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG------------QVSILGDIYSYGILLLEMFTGKRPTGD 608 (717)
Q Consensus 541 l~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~------------~~~~~sDvwslG~vl~elltg~~p~~~ 608 (717)
|+|||.|..+. ...........+||+.||+||.+.. +++.++|||||||+||+|+.|+.||..
T Consensus 500 LIDFGIA~aI~-----~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~ 574 (677)
T KOG0596|consen 500 LIDFGIANAIQ-----PDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQ 574 (677)
T ss_pred eeeechhcccC-----ccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHH
Confidence 99999998762 2233445566789999999998521 258899999999999999999999965
Q ss_pred CCCCchhhhHHHHhcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCC
Q 005045 609 MFKDDFSIHMFVSMALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTS 688 (717)
Q Consensus 609 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~ 688 (717)
... .-..+..+.++.....+.. ... ..++.++++.||++|
T Consensus 575 ~~n------------~~aKl~aI~~P~~~Iefp~---------------------~~~-------~~~li~~mK~CL~rd 614 (677)
T KOG0596|consen 575 IIN------------QIAKLHAITDPNHEIEFPD---------------------IPE-------NDELIDVMKCCLARD 614 (677)
T ss_pred HHH------------HHHHHHhhcCCCccccccC---------------------CCC-------chHHHHHHHHHHhcC
Confidence 311 1122444455533221100 000 223889999999999
Q ss_pred cCCCCCHHHHHH
Q 005045 689 PRERIAMNVVVN 700 (717)
Q Consensus 689 p~~Rps~~eil~ 700 (717)
|.+|||+.|+++
T Consensus 615 PkkR~si~eLLq 626 (677)
T KOG0596|consen 615 PKKRWSIPELLQ 626 (677)
T ss_pred cccCCCcHHHhc
Confidence 999999999986
No 144
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=100.00 E-value=4.5e-38 Score=321.17 Aligned_cols=345 Identities=25% Similarity=0.366 Sum_probs=306.2
Q ss_pred eeCCcc----eecEEEcCCCcCcCCCCcCCcCCCCCCEEECCCCcccccCCcCCCCCCCCCEEEccCccccc-cCCcccc
Q 005045 5 MIPEHL----MTQDLNLTYNYLSGKIPTNLSHCTELRSFEASVNDFVGQIPNQLSSLTKLEIIGLGGSNLTG-NVPAWIG 79 (717)
Q Consensus 5 ~~p~~~----~~~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~-~~p~~~~ 79 (717)
.+|... +++-|.|...++. .+|..++.|.+|+.|.+++|++. .+-+.++.|+.|+.+++.+|++.. -+|..+.
T Consensus 23 ~FP~~v~qMt~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~HN~L~-~vhGELs~Lp~LRsv~~R~N~LKnsGiP~diF 100 (1255)
T KOG0444|consen 23 RFPHDVEQMTQMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAHNQLI-SVHGELSDLPRLRSVIVRDNNLKNSGIPTDIF 100 (1255)
T ss_pred cCchhHHHhhheeEEEechhhhh-hChHHHHHHhhhhhhhhhhhhhH-hhhhhhccchhhHHHhhhccccccCCCCchhc
Confidence 455555 6788999999998 79999999999999999999998 677789999999999999999852 4666788
Q ss_pred CCCCCCEEeccCCcCcccCChhhhccCCCCeEeccCCCCCCCCCccccCCCCccEEEcccCcccccCCcccccCCCCcce
Q 005045 80 NFSSLKALSLAWNNLRGSIPNELGQLSGLGFFTLYGNFISGIIPSSIYNISSIYYFSVTQNQLHGQLPTDVGLTLPNLKI 159 (717)
Q Consensus 80 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~l~~~~~~~l~~L~~ 159 (717)
.+..|+.||||+|+++ ..|..+..-+++-.|+||+|+|..++...|.+|+.|-.||||+|++. .+|+.+. .+..|++
T Consensus 101 ~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~IetIPn~lfinLtDLLfLDLS~NrLe-~LPPQ~R-RL~~Lqt 177 (1255)
T KOG0444|consen 101 RLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIETIPNSLFINLTDLLFLDLSNNRLE-MLPPQIR-RLSMLQT 177 (1255)
T ss_pred ccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccccCCchHHHhhHhHhhhccccchhh-hcCHHHH-HHhhhhh
Confidence 8999999999999999 88999999999999999999999887788899999999999999997 8888876 8899999
Q ss_pred eecccccccccCCccCCCCCCCCEEeccCcccc-ccCCCCccCCCCCCeeeccccccCCcccCchhhhhhhccCCCCCEE
Q 005045 160 FAGAVNYFTGSIPVSLSNASNLQVLDFAENGLT-GTIPGNFGSLKDLVRLNFDQNELGSREIGDLNFLKFLANCTSLEVL 238 (717)
Q Consensus 160 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~l~~L~~L 238 (717)
|.|++|.+....-..+..+++|+.|.+++.+=+ ..+|..+..+.+|..+++|.|.+..+ |+.+.++++|+.|
T Consensus 178 L~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp~v-------Pecly~l~~LrrL 250 (1255)
T KOG0444|consen 178 LKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLPIV-------PECLYKLRNLRRL 250 (1255)
T ss_pred hhcCCChhhHHHHhcCccchhhhhhhcccccchhhcCCCchhhhhhhhhccccccCCCcc-------hHHHhhhhhhhee
Confidence 999999988776677778889999999986533 25788899999999999999999877 6888999999999
Q ss_pred EeecCcccCcCchhhhhccccccEEecCCCccCCCCCccccCCCCCCEEEccCCcCcc-ccchhhhcCCCCCeEEcccCc
Q 005045 239 GLARNSFGGEMPISIANLSTHLRRLTMGENLMHGNIPVGIGNLVNLNLLGLEGNNLSG-SVPEVIGRLNKLEGLGLNVNK 317 (717)
Q Consensus 239 ~L~~N~l~~~~p~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~Ls~N~ 317 (717)
+||+|+|+ .+......+ .+|+.|++|.|+++ .+|.+++.++.|+.|.+.+|+++. -+|+.++++.+|+.+.+++|.
T Consensus 251 NLS~N~it-eL~~~~~~W-~~lEtLNlSrNQLt-~LP~avcKL~kL~kLy~n~NkL~FeGiPSGIGKL~~Levf~aanN~ 327 (1255)
T KOG0444|consen 251 NLSGNKIT-ELNMTEGEW-ENLETLNLSRNQLT-VLPDAVCKLTKLTKLYANNNKLTFEGIPSGIGKLIQLEVFHAANNK 327 (1255)
T ss_pred ccCcCcee-eeeccHHHH-hhhhhhccccchhc-cchHHHhhhHHHHHHHhccCcccccCCccchhhhhhhHHHHhhccc
Confidence 99999999 777777776 58999999999998 799999999999999999999873 378889999999999999999
Q ss_pred CCCCCCcccccccccceeecccccccccCCcCccCcCCCceEEeecccC
Q 005045 318 FSGLIPSSLGNLTILTRLWMEENRLEGSIPPSLGNCQKLLVLNLSSNDL 366 (717)
Q Consensus 318 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l 366 (717)
+. ..|+.++.+.+|+.|.|+.|++. ++|+++.-++.|+.||++.|+=
T Consensus 328 LE-lVPEglcRC~kL~kL~L~~NrLi-TLPeaIHlL~~l~vLDlreNpn 374 (1255)
T KOG0444|consen 328 LE-LVPEGLCRCVKLQKLKLDHNRLI-TLPEAIHLLPDLKVLDLRENPN 374 (1255)
T ss_pred cc-cCchhhhhhHHHHHhccccccee-echhhhhhcCCcceeeccCCcC
Confidence 97 78999999999999999999998 8999999999999999999974
No 145
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=6.2e-35 Score=295.16 Aligned_cols=249 Identities=26% Similarity=0.366 Sum_probs=196.5
Q ss_pred ccccccccCcccccceEEEEeC-CCchhhhHHhHhh--hhhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceEE
Q 005045 390 NFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQ--QQGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFKA 466 (717)
Q Consensus 390 ~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~ 466 (717)
+|.+.+.||+|++|.||+|..+ +++.|++|.+... .......+.+|++++++++||||+++++.+ ...+..+
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~ 75 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESF-----LDKGKLN 75 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeee-----ccCCEEE
Confidence 5788899999999999999965 7889999987643 234457788999999999999999999985 3446899
Q ss_pred EEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeecc
Q 005045 467 LVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGL 546 (717)
Q Consensus 467 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~ 546 (717)
+||||+++++|.+++..... ..+++..+..++.|++.|+.|||+. +++||||+|+||+++.++.++|+|||.
T Consensus 76 lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~~i~~~l~~al~~lH~~---~i~h~dl~~~nili~~~~~~~l~df~~ 147 (256)
T cd08529 76 IVMEYAENGDLHKLLKMQRG-----RPLPEDQVWRFFIQILLGLAHLHSK---KILHRDIKSLNLFLDAYDNVKIGDLGV 147 (256)
T ss_pred EEEEeCCCCcHHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEeCCCCEEEccccc
Confidence 99999999999999875421 5688999999999999999999997 999999999999999999999999999
Q ss_pred chhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHHHhcCC
Q 005045 547 AKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVSMALP 625 (717)
Q Consensus 547 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 625 (717)
+...... ........++..|+|||+..+ .++.++|+|||||++|+|++|+.||...... ....
T Consensus 148 ~~~~~~~-------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~------- 211 (256)
T cd08529 148 AKLLSDN-------TNFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQG--ALIL------- 211 (256)
T ss_pred ceeccCc-------cchhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHH--HHHH-------
Confidence 8765211 111123457889999999654 5789999999999999999999999654311 1100
Q ss_pred hhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHHH
Q 005045 626 DHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVNN 701 (717)
Q Consensus 626 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~~ 701 (717)
.+.....+. ....++..+.+++.+||+.+|++||++.|+++.
T Consensus 212 ----~~~~~~~~~------------------------------~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 253 (256)
T cd08529 212 ----KIIRGVFPP------------------------------VSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRN 253 (256)
T ss_pred ----HHHcCCCCC------------------------------CccccCHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence 000000000 011235668899999999999999999999863
No 146
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=2.4e-35 Score=308.36 Aligned_cols=198 Identities=25% Similarity=0.361 Sum_probs=164.6
Q ss_pred ccccccccCcccccceEEEEeC-CCchhhhHHhHhhh---hhHHHHHHHHHHHHhcC-CCCceeEEEEeeccccCCCCce
Q 005045 390 NFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQ---QGALKSFIDECNALKST-RHRNILRVITACSSVDLEGNDF 464 (717)
Q Consensus 390 ~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~~~~~~~~ 464 (717)
+|++.+.||+|+||.||+|..+ +++.||+|++.... ......+..|..++..+ .|++|+++.+++ ...+.
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~-----~~~~~ 75 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCF-----QTMDR 75 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEE-----ecCCE
Confidence 5889999999999999999965 67889999886542 22345566788888777 578888888884 44568
Q ss_pred EEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeee
Q 005045 465 KALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDF 544 (717)
Q Consensus 465 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Df 544 (717)
.++||||+++++|.+++... ..+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 76 ~~lv~E~~~~g~L~~~~~~~-------~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kL~Df 145 (323)
T cd05616 76 LYFVMEYVNGGDLMYQIQQV-------GRFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADF 145 (323)
T ss_pred EEEEEcCCCCCCHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CEEecCCCHHHeEECCCCcEEEccC
Confidence 99999999999999988654 4688999999999999999999997 9999999999999999999999999
Q ss_pred ccchhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHhCCCCCCCC
Q 005045 545 GLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRPTGDM 609 (717)
Q Consensus 545 g~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~ 609 (717)
|.+..... .........|++.|+|||++.+ .++.++|||||||++|+|++|..||...
T Consensus 146 G~~~~~~~-------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~ 204 (323)
T cd05616 146 GMCKENMW-------DGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGE 204 (323)
T ss_pred CCceecCC-------CCCccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCC
Confidence 99874311 1112234568999999999765 4899999999999999999999999754
No 147
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=3.9e-35 Score=304.83 Aligned_cols=270 Identities=25% Similarity=0.402 Sum_probs=203.0
Q ss_pred ccccccccccccccCcccccceEEEEeC--------CCchhhhHHhHhhh-hhHHHHHHHHHHHHhcC-CCCceeEEEEe
Q 005045 384 ISKSTDNFSKENLIGTGSFGSVYKGTLG--------DGTIVAIKVLKLQQ-QGALKSFIDECNALKST-RHRNILRVITA 453 (717)
Q Consensus 384 ~~~~~~~y~~~~~ig~g~~g~v~~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~ni~~~~~~ 453 (717)
+....++|.+.+.||+|+||.||.|++. .+..+|+|.+.... ......+..|+++++.+ +||||+++++.
T Consensus 13 ~~~~~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~ 92 (307)
T cd05098 13 WEVPRDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGA 92 (307)
T ss_pred ceeehHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEE
Confidence 3445689999999999999999999742 23468999887542 33456788899999999 89999999998
Q ss_pred eccccCCCCceEEEEEecCCCCChhhhccCCCCCc---------ccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeec
Q 005045 454 CSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEH---------YQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHC 524 (717)
Q Consensus 454 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~---------~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~ 524 (717)
+. ..+..++||||+++++|.+++....... .....+++..+++++.|++.|++|||+. +++||
T Consensus 93 ~~-----~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~ 164 (307)
T cd05098 93 CT-----QDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASK---KCIHR 164 (307)
T ss_pred Ee-----cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---Ccccc
Confidence 53 3457899999999999999997543211 1123588999999999999999999997 99999
Q ss_pred CCCCCCEEeCCCCceEEeeeccchhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHh-C
Q 005045 525 DLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFT-G 602 (717)
Q Consensus 525 dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~ellt-g 602 (717)
||||+||+++.++.+||+|||.+........ ........++..|+|||.+.+ .++.++|||||||++|+|++ |
T Consensus 165 dlkp~Nill~~~~~~kL~dfg~a~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g 239 (307)
T cd05098 165 DLAARNVLVTEDNVMKIADFGLARDIHHIDY-----YKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLG 239 (307)
T ss_pred cccHHheEEcCCCcEEECCCcccccccccch-----hhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCC
Confidence 9999999999999999999999875421110 011111224467999999654 48999999999999999998 8
Q ss_pred CCCCCCCCCCchhhhHHHHhcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhh
Q 005045 603 KRPTGDMFKDDFSIHMFVSMALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGL 682 (717)
Q Consensus 603 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 682 (717)
..||.....+ ....... ..... +.+..++..+.+++.
T Consensus 240 ~~p~~~~~~~--~~~~~~~------------~~~~~-----------------------------~~~~~~~~~~~~li~ 276 (307)
T cd05098 240 GSPYPGVPVE--ELFKLLK------------EGHRM-----------------------------DKPSNCTNELYMMMR 276 (307)
T ss_pred CCCCCcCCHH--HHHHHHH------------cCCCC-----------------------------CCCCcCCHHHHHHHH
Confidence 8888543211 1111000 00000 011223567888999
Q ss_pred ccCCCCcCCCCCHHHHHHHHHHHHHHH
Q 005045 683 MCSTTSPRERIAMNVVVNNLKTIRNCF 709 (717)
Q Consensus 683 ~cl~~~p~~Rps~~eil~~l~~i~~~~ 709 (717)
+|++.+|++|||+.||++.|+++....
T Consensus 277 ~~l~~~p~~Rps~~evl~~l~~~~~~~ 303 (307)
T cd05098 277 DCWHAVPSQRPTFKQLVEDLDRILALT 303 (307)
T ss_pred HHcccChhhCcCHHHHHHHHHHHHHHh
Confidence 999999999999999999999998763
No 148
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=5.9e-35 Score=301.92 Aligned_cols=263 Identities=25% Similarity=0.393 Sum_probs=197.8
Q ss_pred cccccccccCcccccceEEEEeC-CCc--hhhhHHhHhh-hhhHHHHHHHHHHHHhcC-CCCceeEEEEeeccccCCCCc
Q 005045 389 DNFSKENLIGTGSFGSVYKGTLG-DGT--IVAIKVLKLQ-QQGALKSFIDECNALKST-RHRNILRVITACSSVDLEGND 463 (717)
Q Consensus 389 ~~y~~~~~ig~g~~g~v~~~~~~-~~~--~vavK~~~~~-~~~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~~~~~~~ 463 (717)
++|++.+.||+|+||.||+|..+ ++. .+++|.++.. .....+.+.+|+++++++ +||||+++++.+. ...
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~-----~~~ 76 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACE-----NRG 76 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEc-----cCC
Confidence 68999999999999999999865 343 3677777632 233456788999999999 7999999999853 345
Q ss_pred eEEEEEecCCCCChhhhccCCCCCc---------ccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeC
Q 005045 464 FKALVFEFMSNGNLDQWLHPSPAEH---------YQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLD 534 (717)
Q Consensus 464 ~~~lv~e~~~~~~L~~~l~~~~~~~---------~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~ 534 (717)
..++||||+++++|.+++....... .....+++..+..++.|++.|++|||+. +++||||||+||+++
T Consensus 77 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nill~ 153 (297)
T cd05089 77 YLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEK---QFIHRDLAARNVLVG 153 (297)
T ss_pred cceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCcCCcceEEEC
Confidence 7899999999999999986532100 0113588999999999999999999997 999999999999999
Q ss_pred CCCceEEeeeccchhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHh-CCCCCCCCCCC
Q 005045 535 KDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFT-GKRPTGDMFKD 612 (717)
Q Consensus 535 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~ 612 (717)
.++.+||+|||++..... .........+..|+|||.+.+ .++.++|||||||++|||++ |..||......
T Consensus 154 ~~~~~kl~dfg~~~~~~~--------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~ 225 (297)
T cd05089 154 ENLASKIADFGLSRGEEV--------YVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCA 225 (297)
T ss_pred CCCeEEECCcCCCccccc--------eeccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHH
Confidence 999999999999864210 001111123457999999655 47999999999999999998 99999654221
Q ss_pred chhhhHHHHhcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCC
Q 005045 613 DFSIHMFVSMALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRER 692 (717)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~R 692 (717)
+ .... +....... .+..++..+.+++.+|++.+|.+|
T Consensus 226 ~--~~~~------------~~~~~~~~-----------------------------~~~~~~~~~~~li~~~l~~~p~~R 262 (297)
T cd05089 226 E--LYEK------------LPQGYRME-----------------------------KPRNCDDEVYELMRQCWRDRPYER 262 (297)
T ss_pred H--HHHH------------HhcCCCCC-----------------------------CCCCCCHHHHHHHHHHcCCChhhC
Confidence 1 0000 00000000 111235567899999999999999
Q ss_pred CCHHHHHHHHHHHHHHHH
Q 005045 693 IAMNVVVNNLKTIRNCFL 710 (717)
Q Consensus 693 ps~~eil~~l~~i~~~~~ 710 (717)
||+.++++.|+.+.++..
T Consensus 263 p~~~~i~~~l~~~~~~~~ 280 (297)
T cd05089 263 PPFAQISVQLSRMLEARK 280 (297)
T ss_pred cCHHHHHHHHHHHHHhhc
Confidence 999999999999887553
No 149
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=2.8e-35 Score=306.54 Aligned_cols=193 Identities=28% Similarity=0.436 Sum_probs=159.6
Q ss_pred cccCcccccceEEEEeC-CCchhhhHHhHhhh---hhHHHHHHHHHHHHhcC-CCCceeEEEEeeccccCCCCceEEEEE
Q 005045 395 NLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQ---QGALKSFIDECNALKST-RHRNILRVITACSSVDLEGNDFKALVF 469 (717)
Q Consensus 395 ~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~~~~~~~~~~lv~ 469 (717)
+.||+|+||.||+|... +++.||+|++.... ......+..|..++... .||||+++++.+ ...+..++||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~-----~~~~~~~lv~ 75 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTF-----QTKEHLFFVM 75 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEE-----EcCCEEEEEE
Confidence 46899999999999965 68889999886542 22334555677776654 899999999884 4456899999
Q ss_pred ecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeeccchh
Q 005045 470 EFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKF 549 (717)
Q Consensus 470 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~ 549 (717)
||+++++|.+++... ..+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||++..
T Consensus 76 e~~~gg~L~~~~~~~-------~~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~ 145 (316)
T cd05592 76 EYLNGGDLMFHIQSS-------GRFDEARARFYAAEIICGLQFLHKK---GIIYRDLKLDNVLLDKDGHIKIADFGMCKE 145 (316)
T ss_pred cCCCCCcHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHeEECCCCCEEEccCcCCeE
Confidence 999999999988754 5689999999999999999999997 999999999999999999999999999875
Q ss_pred cccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHhCCCCCCCC
Q 005045 550 LFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRPTGDM 609 (717)
Q Consensus 550 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~ 609 (717)
.... ........|++.|+|||++.+ .++.++|||||||++|+|++|..||...
T Consensus 146 ~~~~-------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~ 199 (316)
T cd05592 146 NMNG-------EGKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGE 199 (316)
T ss_pred CCCC-------CCccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCC
Confidence 3111 112234568999999999765 4799999999999999999999999754
No 150
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=5.2e-35 Score=295.59 Aligned_cols=248 Identities=27% Similarity=0.408 Sum_probs=190.6
Q ss_pred ccCcccccceEEEEeC---CCchhhhHHhHhhh-hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceEEEEEec
Q 005045 396 LIGTGSFGSVYKGTLG---DGTIVAIKVLKLQQ-QGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFKALVFEF 471 (717)
Q Consensus 396 ~ig~g~~g~v~~~~~~---~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~lv~e~ 471 (717)
.||+|+||.||.|.+. .+..||+|++.... ....+.+.+|+.++++++||||+++++.+. ....++||||
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~------~~~~~lv~e~ 75 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE------AEALMLVMEM 75 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc------CCCeEEEEEe
Confidence 3899999999999753 45568999887543 334567889999999999999999999852 2367999999
Q ss_pred CCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeeccchhcc
Q 005045 472 MSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLF 551 (717)
Q Consensus 472 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~ 551 (717)
+++++|.+++.... ..+++..+++++.|++.|++|||+. +++||||||+||+++.++.+||+|||.+....
T Consensus 76 ~~~~~L~~~l~~~~------~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~ 146 (257)
T cd05115 76 ASGGPLNKFLSGKK------DEITVSNVVELMHQVSMGMKYLEGK---NFVHRDLAARNVLLVNQHYAKISDFGLSKALG 146 (257)
T ss_pred CCCCCHHHHHHhCC------CCCCHHHHHHHHHHHHHHHHHHHhc---CeeecccchheEEEcCCCcEEeccCCcccccc
Confidence 99999999986432 4689999999999999999999997 99999999999999999999999999987542
Q ss_pred cccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHh-CCCCCCCCCCCchhhhHHHHhcCChhhh
Q 005045 552 EISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFT-GKRPTGDMFKDDFSIHMFVSMALPDHVM 629 (717)
Q Consensus 552 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 629 (717)
.... .........++..|+|||.+.+ .++.++|||||||++|++++ |..||......+ ........
T Consensus 147 ~~~~----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~--~~~~~~~~------ 214 (257)
T cd05115 147 ADDS----YYKARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPE--VMSFIEQG------ 214 (257)
T ss_pred CCcc----ceeccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHH--HHHHHHCC------
Confidence 1110 0111112233568999999654 57899999999999999996 999997653221 11111100
Q ss_pred hhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHHHHHHH
Q 005045 630 DILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVNNLKTI 705 (717)
Q Consensus 630 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~~l~~i 705 (717)
... +.+..++.++.+++.+||+.+|++||++.+|.+.|+++
T Consensus 215 ------~~~-----------------------------~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 215 ------KRL-----------------------------DCPAECPPEMYALMKDCWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred ------CCC-----------------------------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence 000 01122366788999999999999999999999998875
No 151
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=5e-35 Score=302.40 Aligned_cols=268 Identities=22% Similarity=0.377 Sum_probs=197.6
Q ss_pred cccccccccccCcccccceEEEEeC-----------------CCchhhhHHhHhh-hhhHHHHHHHHHHHHhcCCCCcee
Q 005045 387 STDNFSKENLIGTGSFGSVYKGTLG-----------------DGTIVAIKVLKLQ-QQGALKSFIDECNALKSTRHRNIL 448 (717)
Q Consensus 387 ~~~~y~~~~~ig~g~~g~v~~~~~~-----------------~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~ni~ 448 (717)
+.++|++.++||+|+||.||.+.+. ++..+|+|.+... .......+.+|+++++.++|+||+
T Consensus 3 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~ 82 (296)
T cd05095 3 PRKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNII 82 (296)
T ss_pred ChhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcc
Confidence 3568999999999999999998532 2345888888754 234457888999999999999999
Q ss_pred EEEEeeccccCCCCceEEEEEecCCCCChhhhccCCCCC----cccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeec
Q 005045 449 RVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAE----HYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHC 524 (717)
Q Consensus 449 ~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~----~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~ 524 (717)
++++++. ..+..++||||+++++|.+++...... ......+++..+..++.|++.|++|||+. +++||
T Consensus 83 ~~~~~~~-----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~ 154 (296)
T cd05095 83 RLLAVCI-----TSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSL---NFVHR 154 (296)
T ss_pred eEEEEEe-----cCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHC---Ceecc
Confidence 9999853 345789999999999999998754321 11224578889999999999999999997 99999
Q ss_pred CCCCCCEEeCCCCceEEeeeccchhcccccCCCCCCcceeecccccccccCCCc-cCCCCCcccchhhHHHHHHHHHh--
Q 005045 525 DLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEH-MNGQVSILGDIYSYGILLLEMFT-- 601 (717)
Q Consensus 525 dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~sDvwslG~vl~ellt-- 601 (717)
||||+||+++.++.++|+|||.+..+.... .........++..|+|||. ..+.++.++|||||||++|||++
T Consensus 155 dlkp~Nili~~~~~~~l~dfg~~~~~~~~~-----~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~ 229 (296)
T cd05095 155 DLATRNCLVGKNYTIKIADFGMSRNLYSGD-----YYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLC 229 (296)
T ss_pred cCChheEEEcCCCCEEeccCcccccccCCc-----ceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhC
Confidence 999999999999999999999987652111 1111122334678999998 45668999999999999999998
Q ss_pred CCCCCCCCCCCchhhhHHHHhcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHh
Q 005045 602 GKRPTGDMFKDDFSIHMFVSMALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIG 681 (717)
Q Consensus 602 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 681 (717)
|..||........ ..... ......... ...+.+..++..+.+++
T Consensus 230 ~~~p~~~~~~~~~--~~~~~--------~~~~~~~~~--------------------------~~~~~~~~~~~~~~~li 273 (296)
T cd05095 230 KEQPYSQLSDEQV--IENTG--------EFFRDQGRQ--------------------------VYLPKPALCPDSLYKLM 273 (296)
T ss_pred CCCCccccChHHH--HHHHH--------HHHhhcccc--------------------------ccCCCCCCCCHHHHHHH
Confidence 7788865322111 00000 000000000 00011223456788999
Q ss_pred hccCCCCcCCCCCHHHHHHHHH
Q 005045 682 LMCSTTSPRERIAMNVVVNNLK 703 (717)
Q Consensus 682 ~~cl~~~p~~Rps~~eil~~l~ 703 (717)
.+||+.+|++|||+.||++.|+
T Consensus 274 ~~cl~~~p~~Rp~~~~i~~~l~ 295 (296)
T cd05095 274 LSCWRRNAKERPSFQEIHATLL 295 (296)
T ss_pred HHHcCCCcccCCCHHHHHHHHh
Confidence 9999999999999999999886
No 152
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=2.3e-35 Score=315.36 Aligned_cols=206 Identities=23% Similarity=0.351 Sum_probs=169.3
Q ss_pred cccccccccCcccccceEEEEeC-CCchhhhHHhHhh---hhhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCce
Q 005045 389 DNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQ---QQGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDF 464 (717)
Q Consensus 389 ~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 464 (717)
++|++.++||+|+||.||+|..+ +++.||+|++... .......+.+|++++++++||||+++++.+ .+...
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~-----~~~~~ 75 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSF-----QDAQY 75 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEE-----EcCCe
Confidence 47999999999999999999954 8899999987543 233456788999999999999999999984 45568
Q ss_pred EEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeee
Q 005045 465 KALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDF 544 (717)
Q Consensus 465 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Df 544 (717)
.|+||||+++++|.+++... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 76 ~~lv~E~~~gg~L~~~l~~~-------~~~~~~~~~~~~~ql~~aL~~LH~~---givHrDlkp~NIll~~~~~~kl~Df 145 (377)
T cd05629 76 LYLIMEFLPGGDLMTMLIKY-------DTFSEDVTRFYMAECVLAIEAVHKL---GFIHRDIKPDNILIDRGGHIKLSDF 145 (377)
T ss_pred eEEEEeCCCCCcHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEEeec
Confidence 99999999999999998754 5688999999999999999999998 9999999999999999999999999
Q ss_pred ccchhcccccCCC------CC-Cc---------------------------------ceeecccccccccCCCccCC-CC
Q 005045 545 GLAKFLFEISDNP------SK-NQ---------------------------------TVSIGLKGSIGYIPPEHMNG-QV 583 (717)
Q Consensus 545 g~~~~~~~~~~~~------~~-~~---------------------------------~~~~~~~~~~~y~aPE~~~~-~~ 583 (717)
|++.......... .. .. .......||+.|+|||++.+ .+
T Consensus 146 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~ 225 (377)
T cd05629 146 GLSTGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGY 225 (377)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCC
Confidence 9986431110000 00 00 00012468999999999755 48
Q ss_pred CcccchhhHHHHHHHHHhCCCCCCCC
Q 005045 584 SILGDIYSYGILLLEMFTGKRPTGDM 609 (717)
Q Consensus 584 ~~~sDvwslG~vl~elltg~~p~~~~ 609 (717)
+.++|||||||++|||++|..||...
T Consensus 226 ~~~~DiwSlGvil~elltG~~Pf~~~ 251 (377)
T cd05629 226 GQECDWWSLGAIMFECLIGWPPFCSE 251 (377)
T ss_pred CCceeeEecchhhhhhhcCCCCCCCC
Confidence 99999999999999999999999654
No 153
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=4.1e-35 Score=301.20 Aligned_cols=273 Identities=24% Similarity=0.407 Sum_probs=199.6
Q ss_pred cccccccccCcccccceEEEEe-----CCCchhhhHHhHhhh-hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCC
Q 005045 389 DNFSKENLIGTGSFGSVYKGTL-----GDGTIVAIKVLKLQQ-QGALKSFIDECNALKSTRHRNILRVITACSSVDLEGN 462 (717)
Q Consensus 389 ~~y~~~~~ig~g~~g~v~~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~ 462 (717)
.-|++.+.||+|+||.||.|.. .+++.||+|.+.... ......+.+|+++++.+.|||++++.+++... +.
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~---~~ 80 (284)
T cd05079 4 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTED---GG 80 (284)
T ss_pred hhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecC---CC
Confidence 3578999999999999999973 257889999986442 33456789999999999999999999986432 23
Q ss_pred ceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEe
Q 005045 463 DFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVG 542 (717)
Q Consensus 463 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~ 542 (717)
...++||||+++++|.+++.... ..+++..+..++.||+.||+|+|+. |++||||||+||+++.++.++|+
T Consensus 81 ~~~~lv~e~~~g~~L~~~l~~~~------~~~~~~~~~~i~~~i~~aL~~lH~~---gi~H~dlkp~Nil~~~~~~~~l~ 151 (284)
T cd05079 81 NGIKLIMEFLPSGSLKEYLPRNK------NKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIG 151 (284)
T ss_pred CceEEEEEccCCCCHHHHHHhcc------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccchheEEEcCCCCEEEC
Confidence 56899999999999999986542 3579999999999999999999997 99999999999999999999999
Q ss_pred eeccchhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHHH
Q 005045 543 DFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVS 621 (717)
Q Consensus 543 Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~ 621 (717)
|||.+....... ..........++..|+|||++.+ .++.++|||||||++|+|+++..|+.......
T Consensus 152 dfg~~~~~~~~~----~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~-------- 219 (284)
T cd05079 152 DFGLTKAIETDK----EYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLF-------- 219 (284)
T ss_pred CCccccccccCc----cceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchh--------
Confidence 999987652111 11111223456778999999554 58899999999999999999877653321100
Q ss_pred hcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHHH
Q 005045 622 MALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVNN 701 (717)
Q Consensus 622 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~~ 701 (717)
.+...+.- .+.......+.+.. .. ..+....++..+.+++.+|++.+|++|||++|+++.
T Consensus 220 -------~~~~~~~~---~~~~~~~~~~~~~~---~~-------~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 279 (284)
T cd05079 220 -------LKMIGPTH---GQMTVTRLVRVLEE---GK-------RLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEG 279 (284)
T ss_pred -------hhhccccc---ccccHHHHHHHHHc---Cc-------cCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence 00000000 00000000000000 00 001122346788999999999999999999999999
Q ss_pred HHHH
Q 005045 702 LKTI 705 (717)
Q Consensus 702 l~~i 705 (717)
++++
T Consensus 280 l~~~ 283 (284)
T cd05079 280 FEAI 283 (284)
T ss_pred HHhh
Confidence 9876
No 154
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=2.8e-35 Score=298.62 Aligned_cols=256 Identities=29% Similarity=0.496 Sum_probs=200.1
Q ss_pred ccccccccccccCcccccceEEEEeCCCchhhhHHhHhhhhhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceE
Q 005045 386 KSTDNFSKENLIGTGSFGSVYKGTLGDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFK 465 (717)
Q Consensus 386 ~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~ 465 (717)
...++|++.+.||+|++|.||.|..++++.+|+|.+..... ....+.+|+.++++++|+||+++++.+ ......
T Consensus 3 ~~~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~ 76 (261)
T cd05034 3 IPRESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTM-SPEAFLQEAQIMKKLRHDKLVQLYAVC-----SEEEPI 76 (261)
T ss_pred cchhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCcc-CHHHHHHHHHHHhhCCCCCEeeeeeee-----ecCCce
Confidence 45678999999999999999999987778899998875432 246788999999999999999999984 344578
Q ss_pred EEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeec
Q 005045 466 ALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFG 545 (717)
Q Consensus 466 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg 545 (717)
++||||+++++|.+++..... ..+++..+..++.+++.|++|||++ +++|+||+|+||+++.++.++|+|||
T Consensus 77 ~~v~e~~~~~~L~~~i~~~~~-----~~~~~~~~~~~~~~i~~al~~lh~~---~i~h~di~p~nili~~~~~~~l~d~g 148 (261)
T cd05034 77 YIVTEYMSKGSLLDFLKSGEG-----KKLRLPQLVDMAAQIAEGMAYLESR---NYIHRDLAARNILVGENLVCKIADFG 148 (261)
T ss_pred EEEEeccCCCCHHHHHhcccc-----CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcchheEEEcCCCCEEECccc
Confidence 999999999999999976421 4689999999999999999999998 99999999999999999999999999
Q ss_pred cchhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHh-CCCCCCCCCCCchhhhHHHHhc
Q 005045 546 LAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFT-GKRPTGDMFKDDFSIHMFVSMA 623 (717)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~ 623 (717)
.+...... ..........+..|+|||.+.+ .++.++||||+||++|++++ |+.||...... .........
T Consensus 149 ~~~~~~~~------~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~--~~~~~~~~~ 220 (261)
T cd05034 149 LARLIEDD------EYTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNR--EVLEQVERG 220 (261)
T ss_pred cceeccch------hhhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHcC
Confidence 98765211 0111112224567999999655 57899999999999999999 99998653211 111111000
Q ss_pred CChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHHHHH
Q 005045 624 LPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVNNLK 703 (717)
Q Consensus 624 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~~l~ 703 (717)
. . .. .+.+++..+.+++.+|++.+|++||+++|+.+.|+
T Consensus 221 ~--------~--~~-------------------------------~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~ 259 (261)
T cd05034 221 Y--------R--MP-------------------------------RPPNCPEELYDLMLQCWDKDPEERPTFEYLQSFLE 259 (261)
T ss_pred C--------C--CC-------------------------------CCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHh
Confidence 0 0 00 01122556789999999999999999999999887
Q ss_pred H
Q 005045 704 T 704 (717)
Q Consensus 704 ~ 704 (717)
.
T Consensus 260 ~ 260 (261)
T cd05034 260 D 260 (261)
T ss_pred c
Confidence 4
No 155
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=5.6e-35 Score=298.29 Aligned_cols=263 Identities=24% Similarity=0.413 Sum_probs=194.7
Q ss_pred cccccccCcccccceEEEEeCC-Cc--hhhhHHhHhh--hhhHHHHHHHHHHHHhcCCCCceeEEEEeeccccC-CCCce
Q 005045 391 FSKENLIGTGSFGSVYKGTLGD-GT--IVAIKVLKLQ--QQGALKSFIDECNALKSTRHRNILRVITACSSVDL-EGNDF 464 (717)
Q Consensus 391 y~~~~~ig~g~~g~v~~~~~~~-~~--~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~-~~~~~ 464 (717)
|.+.+.||+|+||.||+|++.. ++ .+|+|.++.. .....+.+..|+++++.++|+||+++++.+..... .....
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 80 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPS 80 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCC
Confidence 3567899999999999999653 33 5888887643 23445778899999999999999999998754321 12235
Q ss_pred EEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeee
Q 005045 465 KALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDF 544 (717)
Q Consensus 465 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Df 544 (717)
.+++|||+++++|.+++...... .....+++..+..++.||+.|++|||+. +|+||||||+||+++.++.+||+||
T Consensus 81 ~~~v~e~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Df 156 (272)
T cd05075 81 PVVILPFMKHGDLHSFLLYSRLG-DCPQYLPTQMLVKFMTDIASGMEYLSSK---SFIHRDLAARNCMLNENMNVCVADF 156 (272)
T ss_pred cEEEEEeCCCCcHHHHHHHhccc-CCcccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhheEEcCCCCEEECCC
Confidence 78999999999999887432110 0124589999999999999999999997 9999999999999999999999999
Q ss_pred ccchhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHh-CCCCCCCCCCCchhhhHHHHh
Q 005045 545 GLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFT-GKRPTGDMFKDDFSIHMFVSM 622 (717)
Q Consensus 545 g~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~ 622 (717)
|.+........ ........+++.|+|||...+ .++.++|||||||++|+|++ |..||...... ........
T Consensus 157 g~~~~~~~~~~-----~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--~~~~~~~~ 229 (272)
T cd05075 157 GLSKKIYNGDY-----YRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENS--EIYDYLRQ 229 (272)
T ss_pred CcccccCcccc-----eecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHH--HHHHHHHc
Confidence 99886522110 011122335678999999655 48999999999999999999 88898653221 11111000
Q ss_pred cCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHHHH
Q 005045 623 ALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVNNL 702 (717)
Q Consensus 623 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~~l 702 (717)
..... ....++..+.+++.+||+.+|++|||+.||++.|
T Consensus 230 -----------~~~~~------------------------------~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l 268 (272)
T cd05075 230 -----------GNRLK------------------------------QPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCEL 268 (272)
T ss_pred -----------CCCCC------------------------------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHH
Confidence 00000 0112255678999999999999999999999999
Q ss_pred HHH
Q 005045 703 KTI 705 (717)
Q Consensus 703 ~~i 705 (717)
+.+
T Consensus 269 ~~~ 271 (272)
T cd05075 269 EKA 271 (272)
T ss_pred Hhh
Confidence 875
No 156
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=6.9e-35 Score=300.46 Aligned_cols=262 Identities=24% Similarity=0.415 Sum_probs=197.8
Q ss_pred ccccccccCcccccceEEEEeC------CCchhhhHHhHhhh-hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCC
Q 005045 390 NFSKENLIGTGSFGSVYKGTLG------DGTIVAIKVLKLQQ-QGALKSFIDECNALKSTRHRNILRVITACSSVDLEGN 462 (717)
Q Consensus 390 ~y~~~~~ig~g~~g~v~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~ 462 (717)
+|++.+.||+|+||.||+|... ..+.+++|.+.... ......+.+|+.+++.+.||||+++++.+. ..
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~ 75 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACS-----QD 75 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEe-----cC
Confidence 4788999999999999999843 23468888776442 233567889999999999999999999853 34
Q ss_pred ceEEEEEecCCCCChhhhccCCCCCc-----------------ccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecC
Q 005045 463 DFKALVFEFMSNGNLDQWLHPSPAEH-----------------YQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCD 525 (717)
Q Consensus 463 ~~~~lv~e~~~~~~L~~~l~~~~~~~-----------------~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~d 525 (717)
+..+++|||+++++|.+++....... .....+++..+..++.|++.|+.|||+. +++|||
T Consensus 76 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~ivH~d 152 (290)
T cd05045 76 GPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEM---KLVHRD 152 (290)
T ss_pred CCcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHC---Ceehhh
Confidence 57899999999999999876432110 0123578999999999999999999997 999999
Q ss_pred CCCCCEEeCCCCceEEeeeccchhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHh-CC
Q 005045 526 LKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFT-GK 603 (717)
Q Consensus 526 lkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~ellt-g~ 603 (717)
|||+||+++.++.+||+|||.+........ ........++..|+|||...+ .++.++|||||||++|+|++ |.
T Consensus 153 ikp~nill~~~~~~kl~dfg~~~~~~~~~~-----~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~ 227 (290)
T cd05045 153 LAARNVLVAEGRKMKISDFGLSRDVYEEDS-----YVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGG 227 (290)
T ss_pred hhhheEEEcCCCcEEeccccccccccCccc-----hhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCC
Confidence 999999999999999999999876422111 111112335678999998544 48999999999999999998 99
Q ss_pred CCCCCCCCCchhhhHHHHhcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhc
Q 005045 604 RPTGDMFKDDFSIHMFVSMALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLM 683 (717)
Q Consensus 604 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 683 (717)
.||....++. +.+.+....... .+..++..+.+++.+
T Consensus 228 ~p~~~~~~~~--------------~~~~~~~~~~~~-----------------------------~~~~~~~~~~~~i~~ 264 (290)
T cd05045 228 NPYPGIAPER--------------LFNLLKTGYRME-----------------------------RPENCSEEMYNLMLT 264 (290)
T ss_pred CCCCCCCHHH--------------HHHHHhCCCCCC-----------------------------CCCCCCHHHHHHHHH
Confidence 9986542211 111111111100 112235568899999
Q ss_pred cCCCCcCCCCCHHHHHHHHHHHHH
Q 005045 684 CSTTSPRERIAMNVVVNNLKTIRN 707 (717)
Q Consensus 684 cl~~~p~~Rps~~eil~~l~~i~~ 707 (717)
|++.+|++||+++|+++.|+++..
T Consensus 265 cl~~~P~~Rp~~~~i~~~l~~~~~ 288 (290)
T cd05045 265 CWKQEPDKRPTFADISKELEKMMV 288 (290)
T ss_pred HccCCcccCCCHHHHHHHHHHHHh
Confidence 999999999999999999998764
No 157
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=4.2e-35 Score=303.72 Aligned_cols=269 Identities=26% Similarity=0.383 Sum_probs=201.2
Q ss_pred cccccccccccCcccccceEEEEeC-CCch--hhhHHhHhh-hhhHHHHHHHHHHHHhcC-CCCceeEEEEeeccccCCC
Q 005045 387 STDNFSKENLIGTGSFGSVYKGTLG-DGTI--VAIKVLKLQ-QQGALKSFIDECNALKST-RHRNILRVITACSSVDLEG 461 (717)
Q Consensus 387 ~~~~y~~~~~ig~g~~g~v~~~~~~-~~~~--vavK~~~~~-~~~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~~~~~ 461 (717)
..++|++.+.||+|+||.||+|.++ ++.. +++|.+... .......+.+|++++.++ +|+||+++++.+ ..
T Consensus 5 ~~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~-----~~ 79 (303)
T cd05088 5 EWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGAC-----EH 79 (303)
T ss_pred chhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEE-----CC
Confidence 3568999999999999999999964 4543 566665532 233456788899999999 899999999985 34
Q ss_pred CceEEEEEecCCCCChhhhccCCCCCc---------ccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEE
Q 005045 462 NDFKALVFEFMSNGNLDQWLHPSPAEH---------YQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVL 532 (717)
Q Consensus 462 ~~~~~lv~e~~~~~~L~~~l~~~~~~~---------~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIl 532 (717)
.+..++||||+++++|.+++....... .....+++..++.++.||+.|++|||+. +++||||||+||+
T Consensus 80 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dlkp~Nil 156 (303)
T cd05088 80 RGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNIL 156 (303)
T ss_pred CCCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEE
Confidence 558999999999999999986442110 0113588999999999999999999997 9999999999999
Q ss_pred eCCCCceEEeeeccchhcccccCCCCCCcceeecccccccccCCCccCCC-CCcccchhhHHHHHHHHHh-CCCCCCCCC
Q 005045 533 LDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNGQ-VSILGDIYSYGILLLEMFT-GKRPTGDMF 610 (717)
Q Consensus 533 l~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~sDvwslG~vl~ellt-g~~p~~~~~ 610 (717)
++.++.+||+|||.+..... .........+..|+|||.+.+. ++.++|||||||++|+|+| |..||....
T Consensus 157 i~~~~~~kl~dfg~~~~~~~--------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~ 228 (303)
T cd05088 157 VGENYVAKIADFGLSRGQEV--------YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMT 228 (303)
T ss_pred ecCCCcEEeCccccCcccch--------hhhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCC
Confidence 99999999999998863210 0011112245679999996554 7899999999999999998 999986432
Q ss_pred CCchhhhHHHHhcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcC
Q 005045 611 KDDFSIHMFVSMALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPR 690 (717)
Q Consensus 611 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~ 690 (717)
..+ ..... + ....... +..++..+.+++.+||+.+|+
T Consensus 229 ~~~--~~~~~----~----~~~~~~~---------------------------------~~~~~~~~~~li~~~l~~~p~ 265 (303)
T cd05088 229 CAE--LYEKL----P----QGYRLEK---------------------------------PLNCDDEVYDLMRQCWREKPY 265 (303)
T ss_pred hHH--HHHHH----h----cCCcCCC---------------------------------CCCCCHHHHHHHHHHcCCChh
Confidence 211 11000 0 0000000 011244578899999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHhhhh
Q 005045 691 ERIAMNVVVNNLKTIRNCFLEFKK 714 (717)
Q Consensus 691 ~Rps~~eil~~l~~i~~~~~~~~~ 714 (717)
+||++.++++.++.+.++-.++.+
T Consensus 266 ~Rp~~~~il~~l~~~~~~~~~~~~ 289 (303)
T cd05088 266 ERPSFAQILVSLNRMLEERKTYVN 289 (303)
T ss_pred hCcCHHHHHHHHHHHHHhhhhhhh
Confidence 999999999999998877665544
No 158
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=1.3e-35 Score=311.52 Aligned_cols=251 Identities=24% Similarity=0.298 Sum_probs=195.2
Q ss_pred cccccccccCcccccceEEEEeC-CCchhhhHHhHhhh---hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCce
Q 005045 389 DNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQ---QGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDF 464 (717)
Q Consensus 389 ~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 464 (717)
++|.+.+.||+|+||.||+|..+ +++.||+|++.... ......+.+|+.+++.++|++|+++++.+ .+.+.
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~-----~~~~~ 75 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAF-----QDKDN 75 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEE-----ecCCe
Confidence 47999999999999999999965 78999999987542 23456788999999999999999999884 44568
Q ss_pred EEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeee
Q 005045 465 KALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDF 544 (717)
Q Consensus 465 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Df 544 (717)
.++||||+++++|.+++.... ..+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 76 ~~lv~e~~~~~~L~~~l~~~~------~~l~~~~~~~~~~qi~~aL~~lH~~---~i~H~Dlkp~NIll~~~~~~kL~Df 146 (330)
T cd05601 76 LYLVMEYQPGGDLLSLLNRYE------DQFDEDMAQFYLAELVLAIHSVHQM---GYVHRDIKPENVLIDRTGHIKLADF 146 (330)
T ss_pred EEEEECCCCCCCHHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHC---CeEcccCchHheEECCCCCEEeccC
Confidence 999999999999999997542 4689999999999999999999998 9999999999999999999999999
Q ss_pred ccchhcccccCCCCCCcceeecccccccccCCCccC-------CCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhh
Q 005045 545 GLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMN-------GQVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIH 617 (717)
Q Consensus 545 g~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~-------~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~ 617 (717)
|.+...... .........|++.|+|||++. +.++.++|||||||++|+|++|..||....... ..
T Consensus 147 g~a~~~~~~------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~-~~- 218 (330)
T cd05601 147 GSAARLTAN------KMVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAK-TY- 218 (330)
T ss_pred CCCeECCCC------CceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHH-HH-
Confidence 998765211 111223346899999999964 247899999999999999999999996542211 00
Q ss_pred HHHHhcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHH
Q 005045 618 MFVSMALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNV 697 (717)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~e 697 (717)
..+........ .+.....+..+.+++.+|++ +|++|||+.+
T Consensus 219 -----------~~i~~~~~~~~---------------------------~~~~~~~~~~~~~li~~ll~-~p~~R~t~~~ 259 (330)
T cd05601 219 -----------NNIMNFQRFLK---------------------------FPEDPKVSSDFLDLIQSLLC-GQKERLGYEG 259 (330)
T ss_pred -----------HHHHcCCCccC---------------------------CCCCCCCCHHHHHHHHHHcc-ChhhCCCHHH
Confidence 00100000000 00001124557889999998 9999999999
Q ss_pred HHH
Q 005045 698 VVN 700 (717)
Q Consensus 698 il~ 700 (717)
+++
T Consensus 260 l~~ 262 (330)
T cd05601 260 LCC 262 (330)
T ss_pred HhC
Confidence 985
No 159
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=3e-35 Score=306.80 Aligned_cols=240 Identities=24% Similarity=0.339 Sum_probs=187.4
Q ss_pred cccCcccccceEEEEeC-CCchhhhHHhHhhh---hhHHHHHHHHHHHHhcC-CCCceeEEEEeeccccCCCCceEEEEE
Q 005045 395 NLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQ---QGALKSFIDECNALKST-RHRNILRVITACSSVDLEGNDFKALVF 469 (717)
Q Consensus 395 ~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~~~~~~~~~~lv~ 469 (717)
+.||+|+||.||+|.++ +++.||+|++.... ......+..|.++++.+ +||||+++++++ ...+..|+||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~-----~~~~~~~lv~ 75 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCF-----QTKDRLFFVM 75 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEE-----EcCCEEEEEE
Confidence 46899999999999965 68889999887542 23345677888888887 799999999984 4456899999
Q ss_pred ecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeeccchh
Q 005045 470 EFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKF 549 (717)
Q Consensus 470 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~ 549 (717)
||+++++|.+++... ..+++..+..++.||+.||+|||+. +++||||||+||+++.++.+||+|||.+..
T Consensus 76 e~~~~~~L~~~~~~~-------~~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~ 145 (318)
T cd05570 76 EYVNGGDLMFHIQRS-------GRFDEPRARFYAAEIVLGLQFLHER---GIIYRDLKLDNVLLDSEGHIKIADFGMCKE 145 (318)
T ss_pred cCCCCCCHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHhC---CeEccCCCHHHeEECCCCcEEecccCCCee
Confidence 999999999988754 4689999999999999999999997 999999999999999999999999998864
Q ss_pred cccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHHHhcCChhh
Q 005045 550 LFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVSMALPDHV 628 (717)
Q Consensus 550 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 628 (717)
... .........|++.|+|||++.+ .++.++|||||||++|+|++|..||....... ...
T Consensus 146 ~~~-------~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~--~~~---------- 206 (318)
T cd05570 146 GIL-------GGVTTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDE--LFQ---------- 206 (318)
T ss_pred cCc-------CCCcccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHH--HHH----------
Confidence 311 1111223458999999999765 58999999999999999999999996542111 100
Q ss_pred hhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCH-----HHHHH
Q 005045 629 MDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAM-----NVVVN 700 (717)
Q Consensus 629 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~-----~eil~ 700 (717)
.+...... .+...+..+.+++.+||+.+|++|||+ .++++
T Consensus 207 -~i~~~~~~-------------------------------~~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~ 251 (318)
T cd05570 207 -SILEDEVR-------------------------------YPRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKG 251 (318)
T ss_pred -HHHcCCCC-------------------------------CCCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhc
Confidence 00000000 001124567899999999999999999 77765
No 160
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=4.8e-35 Score=295.89 Aligned_cols=250 Identities=26% Similarity=0.397 Sum_probs=195.7
Q ss_pred ccccccccccCcccccceEEEEeCCCchhhhHHhHhhhhhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceEEE
Q 005045 388 TDNFSKENLIGTGSFGSVYKGTLGDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFKAL 467 (717)
Q Consensus 388 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~l 467 (717)
..+|++.+.+|+|++|.||++..+ |+.+++|...... ..+.+.+|+.++++++|++++++++++. ......++
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~----~~~~~~~l 77 (256)
T cd05082 5 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIV----EEKGGLYI 77 (256)
T ss_pred HHhCeeeeeecccCCCeEEEEEEc-CCcEEEEEeCCCc--hHHHHHHHHHHHHhCCCCCeeeEEEEEE----cCCCceEE
Confidence 458999999999999999999864 7788999876432 3467889999999999999999998753 34457899
Q ss_pred EEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeeccc
Q 005045 468 VFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLA 547 (717)
Q Consensus 468 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~ 547 (717)
+|||+++++|.+++..... ..+++..+..++.|++.|++|||++ +++||||||+||+++.++.+||+|||.+
T Consensus 78 v~e~~~~~~L~~~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~ 149 (256)
T cd05082 78 VTEYMAKGSLVDYLRSRGR-----SVLGGDCLLKFSLDVCEAMEYLEAN---NFVHRDLAARNVLVSEDNVAKVSDFGLT 149 (256)
T ss_pred EEECCCCCcHHHHHHhcCC-----CCCCHHHHHHHHHHHHHHHHHHHhC---CEeccccchheEEEcCCCcEEecCCccc
Confidence 9999999999999875421 4578999999999999999999997 9999999999999999999999999998
Q ss_pred hhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHh-CCCCCCCCCCCchhhhHHHHhcCC
Q 005045 548 KFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFT-GKRPTGDMFKDDFSIHMFVSMALP 625 (717)
Q Consensus 548 ~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 625 (717)
...... .....++..|+|||++.+ .++.++|||||||++|+|++ |..||...... .........
T Consensus 150 ~~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~--~~~~~~~~~-- 215 (256)
T cd05082 150 KEASST----------QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK--DVVPRVEKG-- 215 (256)
T ss_pred eecccc----------CCCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHhcC--
Confidence 754111 111234567999999655 48899999999999999998 99998643111 111110000
Q ss_pred hhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHHHHHHH
Q 005045 626 DHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVNNLKTI 705 (717)
Q Consensus 626 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~~l~~i 705 (717)
..+. ....++..+.+++.+|++.+|++|||++++++.|+++
T Consensus 216 ------~~~~---------------------------------~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~~ 256 (256)
T cd05082 216 ------YKMD---------------------------------APDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEHI 256 (256)
T ss_pred ------CCCC---------------------------------CCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhcC
Confidence 0000 1112356788999999999999999999999988764
No 161
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=5.3e-35 Score=303.45 Aligned_cols=269 Identities=23% Similarity=0.403 Sum_probs=203.4
Q ss_pred ccccccccccccccCcccccceEEEEeC--------CCchhhhHHhHhhh-hhHHHHHHHHHHHHhcC-CCCceeEEEEe
Q 005045 384 ISKSTDNFSKENLIGTGSFGSVYKGTLG--------DGTIVAIKVLKLQQ-QGALKSFIDECNALKST-RHRNILRVITA 453 (717)
Q Consensus 384 ~~~~~~~y~~~~~ig~g~~g~v~~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~ni~~~~~~ 453 (717)
+....++|.+.+.||+|+||.||.|+.. .+..||+|...... ......+.+|+.+++.+ +||||+++++.
T Consensus 10 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~ 89 (304)
T cd05101 10 WEFSRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGA 89 (304)
T ss_pred ccccHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEE
Confidence 3456789999999999999999999731 34568999886432 33456788999999999 89999999998
Q ss_pred eccccCCCCceEEEEEecCCCCChhhhccCCCCCc---------ccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeec
Q 005045 454 CSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEH---------YQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHC 524 (717)
Q Consensus 454 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~---------~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~ 524 (717)
+. .....++||||+++++|.+++....... .....+++..+..++.||+.|+.|||++ |++||
T Consensus 90 ~~-----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---givH~ 161 (304)
T cd05101 90 CT-----QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQ---KCIHR 161 (304)
T ss_pred Ee-----cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHC---Ceeec
Confidence 53 3458899999999999999987542111 0124578899999999999999999998 99999
Q ss_pred CCCCCCEEeCCCCceEEeeeccchhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHh-C
Q 005045 525 DLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFT-G 602 (717)
Q Consensus 525 dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~ellt-g 602 (717)
||||+||+++.++.+||+|||.+........ ........++..|+|||++.+ .++.++|||||||++|+|++ |
T Consensus 162 dlkp~Nili~~~~~~kl~D~g~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g 236 (304)
T cd05101 162 DLAARNVLVTENNVMKIADFGLARDVNNIDY-----YKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG 236 (304)
T ss_pred ccccceEEEcCCCcEEECCCccceecccccc-----cccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCC
Confidence 9999999999999999999999886522111 111122335678999999654 58999999999999999998 7
Q ss_pred CCCCCCCCCCchhhhHHHHhcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhh
Q 005045 603 KRPTGDMFKDDFSIHMFVSMALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGL 682 (717)
Q Consensus 603 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 682 (717)
..||......+ ...... ..... ..+..++..+.+++.
T Consensus 237 ~~p~~~~~~~~--~~~~~~------------~~~~~-----------------------------~~~~~~~~~~~~li~ 273 (304)
T cd05101 237 GSPYPGIPVEE--LFKLLK------------EGHRM-----------------------------DKPANCTNELYMMMR 273 (304)
T ss_pred CCCcccCCHHH--HHHHHH------------cCCcC-----------------------------CCCCCCCHHHHHHHH
Confidence 88885432111 100000 00000 011233567889999
Q ss_pred ccCCCCcCCCCCHHHHHHHHHHHHHH
Q 005045 683 MCSTTSPRERIAMNVVVNNLKTIRNC 708 (717)
Q Consensus 683 ~cl~~~p~~Rps~~eil~~l~~i~~~ 708 (717)
+||+.+|++|||+.|+++.|.++..-
T Consensus 274 ~cl~~~p~~Rps~~e~l~~l~~~~~~ 299 (304)
T cd05101 274 DCWHAIPSHRPTFKQLVEDLDRILTL 299 (304)
T ss_pred HHcccChhhCCCHHHHHHHHHHHHHh
Confidence 99999999999999999999998754
No 162
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=3.1e-35 Score=314.91 Aligned_cols=205 Identities=23% Similarity=0.359 Sum_probs=168.9
Q ss_pred ccccccccCcccccceEEEEeC-CCchhhhHHhHhhh---hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceE
Q 005045 390 NFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQ---QGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFK 465 (717)
Q Consensus 390 ~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~ 465 (717)
+|+++++||+|+||.||+|+.. +++.||+|++.... ......+.+|++++++++|+||+++++.+ .+++..
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~-----~~~~~~ 76 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSF-----QDKDNL 76 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEE-----EeCCEE
Confidence 6899999999999999999965 78899999986542 33456788999999999999999999995 445689
Q ss_pred EEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeec
Q 005045 466 ALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFG 545 (717)
Q Consensus 466 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg 545 (717)
|+||||+++|+|.+++.+. ..+++..++.++.||+.||+|||+. +|+||||||+||+++.+|.+||+|||
T Consensus 77 ~lv~E~~~gg~L~~~l~~~-------~~~~e~~~~~~~~qi~~al~~lH~~---~ivHrDlKp~NILl~~~g~~kL~DFG 146 (382)
T cd05625 77 YFVMDYIPGGDMMSLLIRM-------GIFPEDLARFYIAELTCAVESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFG 146 (382)
T ss_pred EEEEeCCCCCcHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEeECC
Confidence 9999999999999998754 4578999999999999999999998 99999999999999999999999999
Q ss_pred cchhcccccCCC----------------------------------------CCCcceeecccccccccCCCccCC-CCC
Q 005045 546 LAKFLFEISDNP----------------------------------------SKNQTVSIGLKGSIGYIPPEHMNG-QVS 584 (717)
Q Consensus 546 ~~~~~~~~~~~~----------------------------------------~~~~~~~~~~~~~~~y~aPE~~~~-~~~ 584 (717)
++.......... ...........||+.|+|||++.+ .++
T Consensus 147 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~ 226 (382)
T cd05625 147 LCTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYT 226 (382)
T ss_pred CCccccccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCC
Confidence 975321000000 000001123468999999999655 589
Q ss_pred cccchhhHHHHHHHHHhCCCCCCCC
Q 005045 585 ILGDIYSYGILLLEMFTGKRPTGDM 609 (717)
Q Consensus 585 ~~sDvwslG~vl~elltg~~p~~~~ 609 (717)
.++||||+||++|||++|..||...
T Consensus 227 ~~~DiwSlGvil~elltG~~Pf~~~ 251 (382)
T cd05625 227 QLCDWWSVGVILYEMLVGQPPFLAQ 251 (382)
T ss_pred CeeeEEechHHHHHHHhCCCCCCCC
Confidence 9999999999999999999999754
No 163
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=2.9e-35 Score=306.47 Aligned_cols=193 Identities=26% Similarity=0.438 Sum_probs=160.6
Q ss_pred cccCcccccceEEEEeC-CCchhhhHHhHhhh---hhHHHHHHHHHHHHhcC-CCCceeEEEEeeccccCCCCceEEEEE
Q 005045 395 NLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQ---QGALKSFIDECNALKST-RHRNILRVITACSSVDLEGNDFKALVF 469 (717)
Q Consensus 395 ~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~~~~~~~~~~lv~ 469 (717)
+.||+|+||.||+|+++ +|+.||+|++.... .........|..++... +||+|+++++.+ ...+..|+||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~-----~~~~~~~lv~ 75 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTF-----QTKEHLFFVM 75 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEE-----EeCCEEEEEE
Confidence 46899999999999965 78899999987542 22345566777777754 899999999984 4456899999
Q ss_pred ecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeeccchh
Q 005045 470 EFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKF 549 (717)
Q Consensus 470 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~ 549 (717)
||+++++|.+++... ..+++..+..++.||+.||+|||++ +|+||||||+||+++.++.++|+|||.+..
T Consensus 76 E~~~~g~L~~~i~~~-------~~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~ 145 (316)
T cd05620 76 EFLNGGDLMFHIQDK-------GRFDLYRATFYAAEIVCGLQFLHSK---GIIYRDLKLDNVMLDRDGHIKIADFGMCKE 145 (316)
T ss_pred CCCCCCcHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEeCccCCCee
Confidence 999999999988754 4688999999999999999999998 999999999999999999999999998864
Q ss_pred cccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHhCCCCCCCC
Q 005045 550 LFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRPTGDM 609 (717)
Q Consensus 550 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~ 609 (717)
... .........|+..|+|||++.+ .++.++||||+||++|+|++|..||...
T Consensus 146 ~~~-------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~ 199 (316)
T cd05620 146 NVF-------GDNRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGD 199 (316)
T ss_pred ccc-------CCCceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCC
Confidence 211 1112234568999999999765 5899999999999999999999999653
No 164
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=6.3e-35 Score=301.11 Aligned_cols=253 Identities=23% Similarity=0.318 Sum_probs=198.1
Q ss_pred ccccccccccccCcccccceEEEEeC-CCchhhhHHhHhhhhhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCce
Q 005045 386 KSTDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDF 464 (717)
Q Consensus 386 ~~~~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 464 (717)
...+.|++.++||+|++|.||+|++. +++.+++|.+..........+..|+++++.++|+||+++++.+. .+..
T Consensus 9 ~~~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~ 83 (292)
T cd06644 9 DPNEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFY-----WDGK 83 (292)
T ss_pred CcchhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEE-----eCCe
Confidence 34578999999999999999999965 68899999988666666778889999999999999999999853 3458
Q ss_pred EEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeee
Q 005045 465 KALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDF 544 (717)
Q Consensus 465 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Df 544 (717)
.++||||++++++..++.... ..+++..+..++.|++.|++|||+. +++||||+|+||+++.++.++|+||
T Consensus 84 ~~lv~e~~~~~~l~~~~~~~~------~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~df 154 (292)
T cd06644 84 LWIMIEFCPGGAVDAIMLELD------RGLTEPQIQVICRQMLEALQYLHSM---KIIHRDLKAGNVLLTLDGDIKLADF 154 (292)
T ss_pred EEEEEecCCCCcHHHHHHhhc------CCCCHHHHHHHHHHHHHHHHHHhcC---CeeecCCCcceEEEcCCCCEEEccC
Confidence 999999999999988875432 4589999999999999999999997 9999999999999999999999999
Q ss_pred ccchhcccccCCCCCCcceeecccccccccCCCccCC------CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhH
Q 005045 545 GLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG------QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHM 618 (717)
Q Consensus 545 g~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~------~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~ 618 (717)
|.+..... .........++..|+|||.+.+ .++.++|||||||++|+|++|..||........ ...
T Consensus 155 g~~~~~~~-------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~-~~~ 226 (292)
T cd06644 155 GVSAKNVK-------TLQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRV-LLK 226 (292)
T ss_pred ccceeccc-------cccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHH-HHH
Confidence 98765311 1111223457889999999642 367899999999999999999999865422110 000
Q ss_pred HHHhcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHH
Q 005045 619 FVSMALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVV 698 (717)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ei 698 (717)
.. ....+... .+..++..+.+++.+||+.+|++||++.|+
T Consensus 227 ~~---------~~~~~~~~-------------------------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i 266 (292)
T cd06644 227 IA---------KSEPPTLS-------------------------------QPSKWSMEFRDFLKTALDKHPETRPSAAQL 266 (292)
T ss_pred Hh---------cCCCccCC-------------------------------CCcccCHHHHHHHHHHhcCCcccCcCHHHH
Confidence 00 00000000 111224567889999999999999999999
Q ss_pred HH
Q 005045 699 VN 700 (717)
Q Consensus 699 l~ 700 (717)
++
T Consensus 267 l~ 268 (292)
T cd06644 267 LE 268 (292)
T ss_pred hc
Confidence 76
No 165
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=4.6e-35 Score=328.32 Aligned_cols=271 Identities=24% Similarity=0.305 Sum_probs=202.5
Q ss_pred cccccccccCcccccceEEEEeC-CCchhhhHHhHhh---hhhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCce
Q 005045 389 DNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQ---QQGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDF 464 (717)
Q Consensus 389 ~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 464 (717)
++|++.++||+|+||.||+|.+. +|+.||+|++... .....+++.+|++++++++||||+++++.+. +++.
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~-----d~~~ 76 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICS-----DGDP 76 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEe-----eCCE
Confidence 68999999999999999999965 7899999998643 2334577899999999999999999999853 4558
Q ss_pred EEEEEecCCCCChhhhccCCCCC----cccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceE
Q 005045 465 KALVFEFMSNGNLDQWLHPSPAE----HYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAH 540 (717)
Q Consensus 465 ~~lv~e~~~~~~L~~~l~~~~~~----~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~k 540 (717)
.++||||++|++|.+++...... .......++..++.++.||+.||+|||+. +|+||||||+||+++.++.++
T Consensus 77 lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~---GIIHRDLKPeNILLd~dg~vK 153 (932)
T PRK13184 77 VYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSK---GVLHRDLKPDNILLGLFGEVV 153 (932)
T ss_pred EEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHC---CccccCCchheEEEcCCCCEE
Confidence 99999999999999988642110 00113467788899999999999999997 999999999999999999999
Q ss_pred EeeeccchhcccccCCCC-----------CCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHhCCCCCCC
Q 005045 541 VGDFGLAKFLFEISDNPS-----------KNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRPTGD 608 (717)
Q Consensus 541 l~Dfg~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~elltg~~p~~~ 608 (717)
|+|||.+........... ..........||+.|+|||.+.+ .++.++|||||||++|||++|..||..
T Consensus 154 LiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~ 233 (932)
T PRK13184 154 ILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRR 233 (932)
T ss_pred EEecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCC
Confidence 999999976521110000 00111223569999999999765 479999999999999999999999965
Q ss_pred CCCCchhhhHHHHhcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCC
Q 005045 609 MFKDDFSIHMFVSMALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTS 688 (717)
Q Consensus 609 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~ 688 (717)
......... .. ..++.. . ....+.+..+.+++.+|++.+
T Consensus 234 ~~~~ki~~~----~~-------i~~P~~-~-----------------------------~p~~~iP~~L~~LI~rcL~~D 272 (932)
T PRK13184 234 KKGRKISYR----DV-------ILSPIE-V-----------------------------APYREIPPFLSQIAMKALAVD 272 (932)
T ss_pred cchhhhhhh----hh-------ccChhh-c-----------------------------cccccCCHHHHHHHHHHccCC
Confidence 322111000 00 000000 0 001123556788999999999
Q ss_pred cCCCC-CHHHHHHHHHHHHHH
Q 005045 689 PRERI-AMNVVVNNLKTIRNC 708 (717)
Q Consensus 689 p~~Rp-s~~eil~~l~~i~~~ 708 (717)
|++|| +++++.+.|+...+.
T Consensus 273 P~kR~ss~eeLl~~Le~~lq~ 293 (932)
T PRK13184 273 PAERYSSVQELKQDLEPHLQG 293 (932)
T ss_pred hhhCcCHHHHHHHHHHHHHhc
Confidence 99996 778888888887653
No 166
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=4.9e-35 Score=300.50 Aligned_cols=261 Identities=25% Similarity=0.424 Sum_probs=196.7
Q ss_pred ccccccccccCcccccceEEEEe-----CCCchhhhHHhHhhh-hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCC
Q 005045 388 TDNFSKENLIGTGSFGSVYKGTL-----GDGTIVAIKVLKLQQ-QGALKSFIDECNALKSTRHRNILRVITACSSVDLEG 461 (717)
Q Consensus 388 ~~~y~~~~~ig~g~~g~v~~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~ 461 (717)
..+|++.+.||+|+||.||+|.. ..++.|++|.+.... ......+.+|++++++++||||+++++.+ ..
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~-----~~ 78 (283)
T cd05090 4 LSAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVV-----TQ 78 (283)
T ss_pred hhhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEE-----ec
Confidence 35788999999999999999983 256789999886432 33346788999999999999999999985 34
Q ss_pred CceEEEEEecCCCCChhhhccCCCCC----------cccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCE
Q 005045 462 NDFKALVFEFMSNGNLDQWLHPSPAE----------HYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNV 531 (717)
Q Consensus 462 ~~~~~lv~e~~~~~~L~~~l~~~~~~----------~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NI 531 (717)
....|+||||+++++|.+++...... ......+++..+..++.|++.|++|||+. +++||||||+||
T Consensus 79 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~ni 155 (283)
T cd05090 79 EQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSH---FFVHKDLAARNI 155 (283)
T ss_pred CCceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhc---CeehhccccceE
Confidence 45789999999999999998532110 00113578899999999999999999998 999999999999
Q ss_pred EeCCCCceEEeeeccchhcccccCCCCCCcceeecccccccccCCCccC-CCCCcccchhhHHHHHHHHHh-CCCCCCCC
Q 005045 532 LLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMN-GQVSILGDIYSYGILLLEMFT-GKRPTGDM 609 (717)
Q Consensus 532 ll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~sDvwslG~vl~ellt-g~~p~~~~ 609 (717)
+++.++.+||+|||.+....... .........++..|+|||.+. +.++.++|||||||++|||++ |..||...
T Consensus 156 li~~~~~~kl~dfg~~~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~ 230 (283)
T cd05090 156 LIGEQLHVKISDLGLSREIYSAD-----YYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGF 230 (283)
T ss_pred EEcCCCcEEeccccccccccCCc-----ceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCC
Confidence 99999999999999987652111 111112233567799999965 458999999999999999999 99998654
Q ss_pred CCCchhhhHHHHhcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCc
Q 005045 610 FKDDFSIHMFVSMALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSP 689 (717)
Q Consensus 610 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p 689 (717)
... .......... ... .+..++..+.+++.+|++.+|
T Consensus 231 ~~~--~~~~~~~~~~----------~~~-------------------------------~~~~~~~~~~~li~~cl~~~p 267 (283)
T cd05090 231 SNQ--EVIEMVRKRQ----------LLP-------------------------------CSEDCPPRMYSLMTECWQEGP 267 (283)
T ss_pred CHH--HHHHHHHcCC----------cCC-------------------------------CCCCCCHHHHHHHHHHcccCc
Confidence 221 1111111000 000 111235567889999999999
Q ss_pred CCCCCHHHHHHHHHH
Q 005045 690 RERIAMNVVVNNLKT 704 (717)
Q Consensus 690 ~~Rps~~eil~~l~~ 704 (717)
++||++.+|.+.+..
T Consensus 268 ~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 268 SRRPRFKDIHTRLRS 282 (283)
T ss_pred ccCcCHHHHHHHhhc
Confidence 999999999998864
No 167
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=3.3e-35 Score=301.33 Aligned_cols=253 Identities=23% Similarity=0.356 Sum_probs=200.1
Q ss_pred cccccccccccCcccccceEEEEeC-CCchhhhHHhHhhhhhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceE
Q 005045 387 STDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFK 465 (717)
Q Consensus 387 ~~~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~ 465 (717)
+.++|++.+.||.|++|.||.|.+. +++.+|+|.+........+.+..|++++++++||||+++++.+. .+...
T Consensus 3 ~~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~ 77 (280)
T cd06611 3 PNDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYF-----YENKL 77 (280)
T ss_pred chhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEe-----cCCeE
Confidence 4678999999999999999999964 78899999987665556678889999999999999999999853 45589
Q ss_pred EEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeec
Q 005045 466 ALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFG 545 (717)
Q Consensus 466 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg 545 (717)
++||||+++++|.+++.... ..+++..+..++.|++.|+.|||+. +++|+||+|+||+++.++.++|+|||
T Consensus 78 ~lv~e~~~~~~L~~~~~~~~------~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~nili~~~~~~~l~d~g 148 (280)
T cd06611 78 WILIEFCDGGALDSIMLELE------RGLTEPQIRYVCRQMLEALNFLHSH---KVIHRDLKAGNILLTLDGDVKLADFG 148 (280)
T ss_pred EEEeeccCCCcHHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEECCCCCEEEccCc
Confidence 99999999999999987542 4689999999999999999999998 99999999999999999999999999
Q ss_pred cchhcccccCCCCCCcceeecccccccccCCCccC------CCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHH
Q 005045 546 LAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMN------GQVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMF 619 (717)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~------~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~ 619 (717)
.+..... .........++..|+|||.+. ..++.++|||||||++|+|++|..||........ .. .
T Consensus 149 ~~~~~~~-------~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~-~~-~ 219 (280)
T cd06611 149 VSAKNKS-------TLQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRV-LL-K 219 (280)
T ss_pred cchhhcc-------cccccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHH-HH-H
Confidence 8765411 111223355888999999953 2367899999999999999999999975422110 00 0
Q ss_pred HHhcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHH
Q 005045 620 VSMALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVV 699 (717)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil 699 (717)
+.....+.+ ..+..++..+.+++.+||+.+|++|||+.+++
T Consensus 220 --------~~~~~~~~~-------------------------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il 260 (280)
T cd06611 220 --------ILKSEPPTL-------------------------------DQPSKWSSSFNDFLKSCLVKDPDDRPTAAELL 260 (280)
T ss_pred --------HhcCCCCCc-------------------------------CCcccCCHHHHHHHHHHhccChhhCcCHHHHh
Confidence 000000000 01112245678899999999999999999998
Q ss_pred HH
Q 005045 700 NN 701 (717)
Q Consensus 700 ~~ 701 (717)
+.
T Consensus 261 ~~ 262 (280)
T cd06611 261 KH 262 (280)
T ss_pred cC
Confidence 75
No 168
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=7.4e-36 Score=311.62 Aligned_cols=194 Identities=29% Similarity=0.412 Sum_probs=163.1
Q ss_pred ccccCcccccceEEEEe----CCCchhhhHHhHhhh--hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceEEE
Q 005045 394 ENLIGTGSFGSVYKGTL----GDGTIVAIKVLKLQQ--QGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFKAL 467 (717)
Q Consensus 394 ~~~ig~g~~g~v~~~~~----~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~l 467 (717)
++.||+|+||.||.++. .+|+.||+|++.... ......+..|++++++++||||+++++.+ ...+..|+
T Consensus 1 l~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~-----~~~~~~~l 75 (318)
T cd05582 1 LKVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAF-----QTEGKLYL 75 (318)
T ss_pred CceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEE-----EcCCEEEE
Confidence 36799999999999874 367889999887543 22345677899999999999999999984 44568999
Q ss_pred EEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeeccc
Q 005045 468 VFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLA 547 (717)
Q Consensus 468 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~ 547 (717)
||||+++++|.+++... ..+++..+..++.||+.||+|||+. +++||||||+||+++.++.+||+|||.+
T Consensus 76 v~e~~~~~~L~~~l~~~-------~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg~~ 145 (318)
T cd05582 76 ILDFLRGGDLFTRLSKE-------VMFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLS 145 (318)
T ss_pred EEcCCCCCcHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHeEECCCCcEEEeeccCC
Confidence 99999999999998654 4689999999999999999999998 9999999999999999999999999998
Q ss_pred hhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHhCCCCCCCC
Q 005045 548 KFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRPTGDM 609 (717)
Q Consensus 548 ~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~ 609 (717)
..... .........|++.|+|||++.+ .++.++|||||||++|+|++|+.||...
T Consensus 146 ~~~~~-------~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~ 201 (318)
T cd05582 146 KESID-------HEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGK 201 (318)
T ss_pred cccCC-------CCCceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCC
Confidence 75411 1112233568999999999765 4789999999999999999999999653
No 169
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=5.4e-35 Score=299.51 Aligned_cols=258 Identities=25% Similarity=0.410 Sum_probs=197.9
Q ss_pred ccccccccccCcccccceEEEEeC-CCc----hhhhHHhHhhh-hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCC
Q 005045 388 TDNFSKENLIGTGSFGSVYKGTLG-DGT----IVAIKVLKLQQ-QGALKSFIDECNALKSTRHRNILRVITACSSVDLEG 461 (717)
Q Consensus 388 ~~~y~~~~~ig~g~~g~v~~~~~~-~~~----~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~ 461 (717)
.++|++.++||+|+||.||+|.+. +++ .||+|.+.... ......+.+|+.+++.+.|+||+++++.+..
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~----- 80 (279)
T cd05109 6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLT----- 80 (279)
T ss_pred hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-----
Confidence 468899999999999999999853 454 47889886432 3345678899999999999999999998642
Q ss_pred CceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEE
Q 005045 462 NDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHV 541 (717)
Q Consensus 462 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl 541 (717)
...+++|||+++|+|.+++.... ..+++..++.++.||+.||+|||+. +++||||||+||+++.++.+||
T Consensus 81 -~~~~l~~~~~~~g~l~~~l~~~~------~~~~~~~~~~~~~qi~~~L~~lH~~---~iiH~dlkp~Nil~~~~~~~kL 150 (279)
T cd05109 81 -STVQLVTQLMPYGCLLDYVRENK------DRIGSQDLLNWCVQIAKGMSYLEEV---RLVHRDLAARNVLVKSPNHVKI 150 (279)
T ss_pred -CCcEEEEEcCCCCCHHHHHhhcc------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceEEEcCCCcEEE
Confidence 24679999999999999987542 4689999999999999999999998 9999999999999999999999
Q ss_pred eeeccchhcccccCCCCCCcceeecccccccccCCCccC-CCCCcccchhhHHHHHHHHHh-CCCCCCCCCCCchhhhHH
Q 005045 542 GDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMN-GQVSILGDIYSYGILLLEMFT-GKRPTGDMFKDDFSIHMF 619 (717)
Q Consensus 542 ~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~ 619 (717)
+|||.++...... .........++..|+|||... +.++.++|||||||++|||++ |..||....... ....
T Consensus 151 ~dfG~~~~~~~~~-----~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~--~~~~ 223 (279)
T cd05109 151 TDFGLARLLDIDE-----TEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPARE--IPDL 223 (279)
T ss_pred CCCCceeeccccc-----ceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH--HHHH
Confidence 9999987652111 011111223467899999964 458999999999999999998 999986532211 1111
Q ss_pred HHhcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHH
Q 005045 620 VSMALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVV 699 (717)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil 699 (717)
.. ..... ..+..++..+.+++.+||+.+|+.||++.|++
T Consensus 224 ~~------------~~~~~-----------------------------~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~ 262 (279)
T cd05109 224 LE------------KGERL-----------------------------PQPPICTIDVYMIMVKCWMIDSECRPRFRELV 262 (279)
T ss_pred HH------------CCCcC-----------------------------CCCccCCHHHHHHHHHHcCCChhhCcCHHHHH
Confidence 11 00000 00112355678899999999999999999999
Q ss_pred HHHHHHHHH
Q 005045 700 NNLKTIRNC 708 (717)
Q Consensus 700 ~~l~~i~~~ 708 (717)
+.++++...
T Consensus 263 ~~l~~~~~~ 271 (279)
T cd05109 263 DEFSRMARD 271 (279)
T ss_pred HHHHHhhcC
Confidence 998887644
No 170
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=4.6e-35 Score=297.98 Aligned_cols=257 Identities=27% Similarity=0.457 Sum_probs=197.6
Q ss_pred ccccccccccCcccccceEEEEeC-C---CchhhhHHhHhhh-hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCC
Q 005045 388 TDNFSKENLIGTGSFGSVYKGTLG-D---GTIVAIKVLKLQQ-QGALKSFIDECNALKSTRHRNILRVITACSSVDLEGN 462 (717)
Q Consensus 388 ~~~y~~~~~ig~g~~g~v~~~~~~-~---~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~ 462 (717)
.++|++.+.||+|+||.||+|.+. + +..+|+|.+.... ....+.+..|+.++++++||||+++++++ ..+
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~ 77 (267)
T cd05066 3 ASCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVV-----TKS 77 (267)
T ss_pred HHHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEE-----ecC
Confidence 468999999999999999999853 2 3368888876432 33456788999999999999999999985 345
Q ss_pred ceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEe
Q 005045 463 DFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVG 542 (717)
Q Consensus 463 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~ 542 (717)
+..++||||+++++|.+++.... ..+++..+..++.|++.|++|||+. +++||||||+||+++.++.++++
T Consensus 78 ~~~~lv~e~~~~~~L~~~~~~~~------~~~~~~~~~~i~~~i~~~l~~lH~~---~i~h~dlkp~nili~~~~~~~l~ 148 (267)
T cd05066 78 KPVMIVTEYMENGSLDAFLRKHD------GQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILVNSNLVCKVS 148 (267)
T ss_pred CccEEEEEcCCCCCHHHHHHhcC------CCCCHHHHHHHHHHHHHHHHHHHHC---CEeehhhchhcEEECCCCeEEeC
Confidence 58899999999999999987542 4578999999999999999999997 99999999999999999999999
Q ss_pred eeccchhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHh-CCCCCCCCCCCchhhhHHH
Q 005045 543 DFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFT-GKRPTGDMFKDDFSIHMFV 620 (717)
Q Consensus 543 Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~ 620 (717)
|||.+....... ..........++..|+|||.+.+ .++.++|+|||||++|++++ |..||......+ .....
T Consensus 149 dfg~~~~~~~~~----~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~--~~~~~ 222 (267)
T cd05066 149 DFGLSRVLEDDP----EAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQD--VIKAI 222 (267)
T ss_pred CCCccccccccc----ceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHH--HHHHH
Confidence 999988652211 00111111223567999999764 58999999999999999887 999986542211 11111
Q ss_pred HhcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHH
Q 005045 621 SMALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVN 700 (717)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~ 700 (717)
. +... .+ .+..++..+.+++.+|++.+|++|||+.++++
T Consensus 223 ~--------~~~~--~~-------------------------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 261 (267)
T cd05066 223 E--------EGYR--LP-------------------------------APMDCPAALHQLMLDCWQKDRNERPKFEQIVS 261 (267)
T ss_pred h--------CCCc--CC-------------------------------CCCCCCHHHHHHHHHHcccCchhCCCHHHHHH
Confidence 0 0000 00 01122556789999999999999999999999
Q ss_pred HHHHH
Q 005045 701 NLKTI 705 (717)
Q Consensus 701 ~l~~i 705 (717)
.|.++
T Consensus 262 ~l~~~ 266 (267)
T cd05066 262 ILDKL 266 (267)
T ss_pred HHHhh
Confidence 99875
No 171
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=2.1e-35 Score=309.57 Aligned_cols=205 Identities=21% Similarity=0.254 Sum_probs=163.8
Q ss_pred cccccCcc--cccceEEEEeC-CCchhhhHHhHhhh--hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceEEE
Q 005045 393 KENLIGTG--SFGSVYKGTLG-DGTIVAIKVLKLQQ--QGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFKAL 467 (717)
Q Consensus 393 ~~~~ig~g--~~g~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~l 467 (717)
++++||+| +++.||++..+ +|+.||+|.+.... ......+.+|+++++.++||||+++++++. .++..++
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~-----~~~~~~l 76 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFI-----ADNELWV 76 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEE-----ECCEEEE
Confidence 56789999 67899999864 89999999987542 334567888999999999999999999854 3458999
Q ss_pred EEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeeccc
Q 005045 468 VFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLA 547 (717)
Q Consensus 468 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~ 547 (717)
||||++++++.+++..... ..+++..++.++.|++.||+|||+. +++||||||+||+++.++.++++||+.+
T Consensus 77 v~e~~~~~~l~~~~~~~~~-----~~l~~~~~~~i~~qi~~~L~~LH~~---~iiH~dlkp~Nil~~~~~~~~l~~~~~~ 148 (327)
T cd08227 77 VTSFMAYGSAKDLICTHFM-----DGMSELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSN 148 (327)
T ss_pred EEeccCCCcHHHHHHhhcc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCChhhEEEecCCcEEEcccchh
Confidence 9999999999999865421 4588999999999999999999997 9999999999999999999999999876
Q ss_pred hhcccccCCCCCCcceeecccccccccCCCccCC---CCCcccchhhHHHHHHHHHhCCCCCCCCC
Q 005045 548 KFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG---QVSILGDIYSYGILLLEMFTGKRPTGDMF 610 (717)
Q Consensus 548 ~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~---~~~~~sDvwslG~vl~elltg~~p~~~~~ 610 (717)
.....................++..|+|||++.+ .++.++|||||||++|+|++|..||....
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~ 214 (327)
T cd08227 149 LSMINHGQRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMP 214 (327)
T ss_pred hccccccccccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcc
Confidence 5432111111000111122346778999999754 37899999999999999999999997643
No 172
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=3e-35 Score=301.46 Aligned_cols=260 Identities=26% Similarity=0.440 Sum_probs=198.3
Q ss_pred ccccccccccCcccccceEEEEeC------CCchhhhHHhHhhhhhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCC
Q 005045 388 TDNFSKENLIGTGSFGSVYKGTLG------DGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRVITACSSVDLEG 461 (717)
Q Consensus 388 ~~~y~~~~~ig~g~~g~v~~~~~~------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~ 461 (717)
..+|+..+++|+|+||.||.|... ++..+++|.+..........+.+|+++++.++|+||+++++.+. .
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~ 78 (280)
T cd05092 4 RRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCT-----E 78 (280)
T ss_pred hHhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEe-----c
Confidence 467889999999999999999631 45678888887655556678999999999999999999999853 3
Q ss_pred CceEEEEEecCCCCChhhhccCCCCC--------cccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEe
Q 005045 462 NDFKALVFEFMSNGNLDQWLHPSPAE--------HYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLL 533 (717)
Q Consensus 462 ~~~~~lv~e~~~~~~L~~~l~~~~~~--------~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll 533 (717)
....+++|||+++++|.+++...... ......+++..++.++.|++.|++|||+. +++||||||+||++
T Consensus 79 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~nil~ 155 (280)
T cd05092 79 GRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASL---HFVHRDLATRNCLV 155 (280)
T ss_pred CCceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHC---CeecccccHhhEEE
Confidence 45789999999999999998754311 01113578999999999999999999997 99999999999999
Q ss_pred CCCCceEEeeeccchhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHh-CCCCCCCCCC
Q 005045 534 DKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFT-GKRPTGDMFK 611 (717)
Q Consensus 534 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~ellt-g~~p~~~~~~ 611 (717)
+.++.+||+|||.+...... ..........+++.|+|||.+.+ .++.++|||||||++|+|++ |..||.....
T Consensus 156 ~~~~~~kL~dfg~~~~~~~~-----~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~ 230 (280)
T cd05092 156 GQGLVVKIGDFGMSRDIYST-----DYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSN 230 (280)
T ss_pred cCCCCEEECCCCceeEcCCC-----ceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCH
Confidence 99999999999998754211 11111122335678999999654 58999999999999999998 9999865322
Q ss_pred CchhhhHHHHhcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCC
Q 005045 612 DDFSIHMFVSMALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRE 691 (717)
Q Consensus 612 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~ 691 (717)
.+. .... ...... ..+..++..+.+++.+||+.+|++
T Consensus 231 ~~~--~~~~-----------~~~~~~------------------------------~~~~~~~~~~~~li~~cl~~~P~~ 267 (280)
T cd05092 231 TEA--IECI-----------TQGREL------------------------------ERPRTCPPEVYAIMQGCWQREPQQ 267 (280)
T ss_pred HHH--HHHH-----------HcCccC------------------------------CCCCCCCHHHHHHHHHHccCChhh
Confidence 110 0000 000000 011123556789999999999999
Q ss_pred CCCHHHHHHHHH
Q 005045 692 RIAMNVVVNNLK 703 (717)
Q Consensus 692 Rps~~eil~~l~ 703 (717)
||+++||++.|+
T Consensus 268 Rp~~~~l~~~l~ 279 (280)
T cd05092 268 RMVIKDIHSRLQ 279 (280)
T ss_pred CCCHHHHHHHHh
Confidence 999999999886
No 173
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=9.6e-35 Score=295.01 Aligned_cols=252 Identities=21% Similarity=0.323 Sum_probs=195.4
Q ss_pred cccccccccCcccccceEEEEeC-CCchhhhHHhHhhh-----hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCC
Q 005045 389 DNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQ-----QGALKSFIDECNALKSTRHRNILRVITACSSVDLEGN 462 (717)
Q Consensus 389 ~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~ 462 (717)
++|.+.+.||+|++|.||.|... +++.||+|.+.... ......+.+|++++++++||||+++++++ ...
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~ 76 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCL-----RDD 76 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEE-----ccC
Confidence 57999999999999999999954 78999999875331 22346788999999999999999999995 344
Q ss_pred ceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEe
Q 005045 463 DFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVG 542 (717)
Q Consensus 463 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~ 542 (717)
+..++||||+++++|.+++... ..+++..+..++.|++.|++|||+. +++||||+|+||+++.++.++|+
T Consensus 77 ~~~~~v~e~~~~~~l~~~~~~~-------~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nilv~~~~~~~l~ 146 (263)
T cd06625 77 ETLSIFMEYMPGGSVKDQLKAY-------GALTETVTRKYTRQILEGVEYLHSN---MIVHRDIKGANILRDSAGNVKLG 146 (263)
T ss_pred CeEEEEEEECCCCcHHHHHHHh-------CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEe
Confidence 5899999999999999998754 4578899999999999999999998 99999999999999999999999
Q ss_pred eeccchhcccccCCCCCCcceeecccccccccCCCccCCC-CCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHHH
Q 005045 543 DFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNGQ-VSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVS 621 (717)
Q Consensus 543 Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~ 621 (717)
|||.+......... ........++..|+|||...+. ++.++||||+||++|+|++|+.||........ ...
T Consensus 147 dfg~~~~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~-~~~--- 218 (263)
T cd06625 147 DFGASKRLQTICSS----GTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAA-IFK--- 218 (263)
T ss_pred ecccceeccccccc----cccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHH-HHH---
Confidence 99998754221110 0101224477889999997654 78999999999999999999999865321110 000
Q ss_pred hcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHHH
Q 005045 622 MALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVNN 701 (717)
Q Consensus 622 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~~ 701 (717)
........ ..+..++..+.+++.+||+.+|++|||+.|+++.
T Consensus 219 ---------~~~~~~~~-----------------------------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 260 (263)
T cd06625 219 ---------IATQPTNP-----------------------------QLPSHVSPDARNFLRRTFVENAKKRPSAEELLRH 260 (263)
T ss_pred ---------HhccCCCC-----------------------------CCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence 00000000 0111235567889999999999999999999864
No 174
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2e-35 Score=301.29 Aligned_cols=263 Identities=25% Similarity=0.433 Sum_probs=214.0
Q ss_pred ccccccccccccccccCcccccceEEEEeC-CCchhhhHHhHhhhhhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCC
Q 005045 382 SDISKSTDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRVITACSSVDLE 460 (717)
Q Consensus 382 ~~~~~~~~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~ 460 (717)
+.|..-..+...-+++|-|-||.||.|.|+ -.-.||||.++.+.. ....|..|+.+|+.++|||+|+++++|...
T Consensus 260 DkWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtM-eveEFLkEAAvMKeikHpNLVqLLGVCT~E--- 335 (1157)
T KOG4278|consen 260 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCTHE--- 335 (1157)
T ss_pred chhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhcch-hHHHHHHHHHHHHhhcCccHHHHhhhhccC---
Confidence 444444556677889999999999999987 456799999986654 368899999999999999999999997543
Q ss_pred CCceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceE
Q 005045 461 GNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAH 540 (717)
Q Consensus 461 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~k 540 (717)
...|||+|||..|+|.||+++... ..++....+.+|.||+.||.||... .++||||.++|.+|.++..||
T Consensus 336 --pPFYIiTEfM~yGNLLdYLRecnr-----~ev~avvLlyMAtQIsSaMeYLEkk---nFIHRDLAARNCLVgEnhiVK 405 (1157)
T KOG4278|consen 336 --PPFYIITEFMCYGNLLDYLRECNR-----SEVPAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHIVK 405 (1157)
T ss_pred --CCeEEEEecccCccHHHHHHHhch-----hhcchhHHHHHHHHHHHHHHHHHHh---hhhhhhhhhhhccccccceEE
Confidence 378999999999999999987643 5677778889999999999999996 999999999999999999999
Q ss_pred EeeeccchhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHh-CCCCCCCCCCCchhhhH
Q 005045 541 VGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFT-GKRPTGDMFKDDFSIHM 618 (717)
Q Consensus 541 l~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~ 618 (717)
++|||+++.+.... +....+..-+.-|-|||-+.- .++-|+|||+|||++||+-| |-.||.+.+-
T Consensus 406 vADFGLsRlMtgDT------YTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidl------- 472 (1157)
T KOG4278|consen 406 VADFGLSRLMTGDT------YTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDL------- 472 (1157)
T ss_pred eeccchhhhhcCCc------eecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccH-------
Confidence 99999999883321 222223345678999999654 58999999999999999999 9999977522
Q ss_pred HHHhcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHH
Q 005045 619 FVSMALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVV 698 (717)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ei 698 (717)
.+++++++.... ++.++-|+..+++|++.||+|+|.+||+++||
T Consensus 473 --------------------------SqVY~LLEkgyR----------M~~PeGCPpkVYeLMraCW~WsPsDRPsFaei 516 (1157)
T KOG4278|consen 473 --------------------------SQVYGLLEKGYR----------MDGPEGCPPKVYELMRACWNWSPSDRPSFAEI 516 (1157)
T ss_pred --------------------------HHHHHHHhcccc----------ccCCCCCCHHHHHHHHHHhcCCcccCccHHHH
Confidence 122222222111 23667899999999999999999999999999
Q ss_pred HHHHHHHHH
Q 005045 699 VNNLKTIRN 707 (717)
Q Consensus 699 l~~l~~i~~ 707 (717)
.+.+|++-.
T Consensus 517 HqafEtmf~ 525 (1157)
T KOG4278|consen 517 HQAFETMFS 525 (1157)
T ss_pred HHHHHHHhc
Confidence 999998763
No 175
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=3.5e-35 Score=305.62 Aligned_cols=240 Identities=24% Similarity=0.379 Sum_probs=184.5
Q ss_pred cccCcccccceEEEEeC-CCchhhhHHhHhhh---hhHHHHHHHHHHHHhc-CCCCceeEEEEeeccccCCCCceEEEEE
Q 005045 395 NLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQ---QGALKSFIDECNALKS-TRHRNILRVITACSSVDLEGNDFKALVF 469 (717)
Q Consensus 395 ~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~-l~h~ni~~~~~~~~~~~~~~~~~~~lv~ 469 (717)
+.||+|+||.||+|.++ +++.||+|++.... ......+..|..+++. ++||||+++++.+ .+.+..++||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~-----~~~~~~~lv~ 75 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTF-----QTKENLFFVM 75 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEE-----EeCCEEEEEE
Confidence 46899999999999965 68889999886542 2234556677777776 4999999999985 4456899999
Q ss_pred ecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeeccchh
Q 005045 470 EFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKF 549 (717)
Q Consensus 470 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~ 549 (717)
||+++++|.+++... ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||.+..
T Consensus 76 ey~~~g~L~~~l~~~-------~~~~~~~~~~~~~qi~~al~~LH~~---~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~ 145 (316)
T cd05619 76 EYLNGGDLMFHIQSC-------HKFDLPRATFYAAEIICGLQFLHSK---GIVYRDLKLDNILLDTDGHIKIADFGMCKE 145 (316)
T ss_pred eCCCCCcHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEccCCcceE
Confidence 999999999998754 4688999999999999999999998 999999999999999999999999999864
Q ss_pred cccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHHHhcCChhh
Q 005045 550 LFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVSMALPDHV 628 (717)
Q Consensus 550 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 628 (717)
... .........|++.|+|||++.+ .++.++||||+||++|+|++|..||...... ........
T Consensus 146 ~~~-------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~--~~~~~i~~------ 210 (316)
T cd05619 146 NML-------GDAKTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEE--ELFQSIRM------ 210 (316)
T ss_pred CCC-------CCCceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHH--HHHHHHHh------
Confidence 311 1112234568999999999765 4899999999999999999999999754211 11111000
Q ss_pred hhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHH-HHHH
Q 005045 629 MDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMN-VVVN 700 (717)
Q Consensus 629 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~-eil~ 700 (717)
..+..+ ...+..+.+++.+||+.+|++||++. ++.+
T Consensus 211 ---~~~~~~---------------------------------~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~ 247 (316)
T cd05619 211 ---DNPCYP---------------------------------RWLTREAKDILVKLFVREPERRLGVKGDIRQ 247 (316)
T ss_pred ---CCCCCC---------------------------------ccCCHHHHHHHHHHhccCHhhcCCChHHHHc
Confidence 000000 01134567899999999999999997 5543
No 176
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=5.7e-35 Score=295.46 Aligned_cols=246 Identities=26% Similarity=0.428 Sum_probs=190.2
Q ss_pred ccCcccccceEEEEe---CCCchhhhHHhHhhh--hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceEEEEEe
Q 005045 396 LIGTGSFGSVYKGTL---GDGTIVAIKVLKLQQ--QGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFKALVFE 470 (717)
Q Consensus 396 ~ig~g~~g~v~~~~~---~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~lv~e 470 (717)
+||+|+||.||+|.+ ++++.+|+|++.... ....+.+..|+.+++.+.||||+++++.+. .+..++|||
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~------~~~~~lv~e 75 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE------AESWMLVME 75 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc------CCCcEEEEe
Confidence 589999999999974 367889999886442 334577889999999999999999998852 235789999
Q ss_pred cCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeeccchhc
Q 005045 471 FMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFL 550 (717)
Q Consensus 471 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~ 550 (717)
|+++++|.+++... ..+++..+..++.|++.|++|+|+. +++||||||+||+++.++.+||+|||.+...
T Consensus 76 ~~~~~~L~~~l~~~-------~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~ 145 (257)
T cd05116 76 LAELGPLNKFLQKN-------KHVTEKNITELVHQVSMGMKYLEET---NFVHRDLAARNVLLVTQHYAKISDFGLSKAL 145 (257)
T ss_pred cCCCCcHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchhhEEEcCCCeEEECCCcccccc
Confidence 99999999998654 4688999999999999999999997 9999999999999999999999999998765
Q ss_pred ccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHh-CCCCCCCCCCCchhhhHHHHhcCChhh
Q 005045 551 FEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFT-GKRPTGDMFKDDFSIHMFVSMALPDHV 628 (717)
Q Consensus 551 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 628 (717)
..... .........++..|+|||.+.+ .++.++|||||||++|||++ |..||...... ......
T Consensus 146 ~~~~~----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~--~~~~~i-------- 211 (257)
T cd05116 146 GADEN----YYKAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGN--EVTQMI-------- 211 (257)
T ss_pred CCCCC----eeeecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHH--------
Confidence 21111 0111122234578999999654 57889999999999999998 99999754221 111111
Q ss_pred hhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHHHHHH
Q 005045 629 MDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVNNLKT 704 (717)
Q Consensus 629 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~~l~~ 704 (717)
....... .+..++..+.+++.+||+.+|++||++.+|.+.|++
T Consensus 212 ----~~~~~~~-----------------------------~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~ 254 (257)
T cd05116 212 ----ESGERME-----------------------------CPQRCPPEMYDLMKLCWTYGVDERPGFAVVELRLRN 254 (257)
T ss_pred ----HCCCCCC-----------------------------CCCCCCHHHHHHHHHHhccCchhCcCHHHHHHHHhc
Confidence 1100000 111235668899999999999999999999999875
No 177
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=2.8e-35 Score=307.89 Aligned_cols=193 Identities=30% Similarity=0.422 Sum_probs=158.9
Q ss_pred cccCcccccceEEEEeC-CCchhhhHHhHhhh---hhHHHHHHHHHH-HHhcCCCCceeEEEEeeccccCCCCceEEEEE
Q 005045 395 NLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQ---QGALKSFIDECN-ALKSTRHRNILRVITACSSVDLEGNDFKALVF 469 (717)
Q Consensus 395 ~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~-~l~~l~h~ni~~~~~~~~~~~~~~~~~~~lv~ 469 (717)
+.||+|+||.||+|+++ +|+.||+|++.... ......+..|.. +++.++||||+++++.+ ...+..++||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~-----~~~~~~~lv~ 75 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSF-----QTADKLYFVL 75 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEE-----EeCCEEEEEE
Confidence 46899999999999965 78999999986432 222344445544 56789999999999884 4456899999
Q ss_pred ecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeeccchh
Q 005045 470 EFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKF 549 (717)
Q Consensus 470 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~ 549 (717)
||+++++|.+++... ..+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||++..
T Consensus 76 e~~~~g~L~~~l~~~-------~~~~~~~~~~~~~qi~~~l~~lH~~---givH~dikp~NIll~~~~~~kl~Dfg~~~~ 145 (323)
T cd05575 76 DYVNGGELFFHLQRE-------RSFPEPRARFYAAEIASALGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKE 145 (323)
T ss_pred cCCCCCCHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeccCCCcc
Confidence 999999999988754 5688999999999999999999997 999999999999999999999999999875
Q ss_pred cccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHhCCCCCCCC
Q 005045 550 LFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRPTGDM 609 (717)
Q Consensus 550 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~ 609 (717)
... .........|++.|+|||++.+ .++.++|||||||++|+|++|..||...
T Consensus 146 ~~~-------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~ 199 (323)
T cd05575 146 GIE-------HSKTTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSR 199 (323)
T ss_pred ccc-------CCCccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCC
Confidence 311 1112233568999999999765 4889999999999999999999999653
No 178
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=5.7e-35 Score=298.28 Aligned_cols=258 Identities=24% Similarity=0.333 Sum_probs=198.4
Q ss_pred cccccccccccccCcccccceEEEEeC-CCchhhhHHhHhhhhhHHHHHHHHHHHHhcC-CCCceeEEEEeeccccCC-C
Q 005045 385 SKSTDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQQGALKSFIDECNALKST-RHRNILRVITACSSVDLE-G 461 (717)
Q Consensus 385 ~~~~~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~~~~-~ 461 (717)
..+.+.|++.+.||+|++|.||.|..+ +++.||+|.+..... ....+..|+.+++++ +|+||+++++.+...... .
T Consensus 2 ~~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~ 80 (272)
T cd06637 2 RDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD-EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGM 80 (272)
T ss_pred CChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCc-cHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCC
Confidence 467889999999999999999999965 788899998865432 235677899999998 799999999987543221 1
Q ss_pred CceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEE
Q 005045 462 NDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHV 541 (717)
Q Consensus 462 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl 541 (717)
....++||||+++++|.+++..... ..+++..+..++.|++.|++|||+. +++||||+|+||+++.++.++|
T Consensus 81 ~~~~~iv~e~~~~~~L~~~l~~~~~-----~~l~~~~~~~~~~qi~~~l~~LH~~---~ivh~dl~~~nili~~~~~~~l 152 (272)
T cd06637 81 DDQLWLVMEFCGAGSVTDLIKNTKG-----NTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKL 152 (272)
T ss_pred CcEEEEEEEcCCCCcHHHHHHhccC-----CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHEEECCCCCEEE
Confidence 3468999999999999999875321 4688999999999999999999997 9999999999999999999999
Q ss_pred eeeccchhcccccCCCCCCcceeecccccccccCCCccC------CCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchh
Q 005045 542 GDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMN------GQVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFS 615 (717)
Q Consensus 542 ~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~------~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~ 615 (717)
+|||.+...... ........|+..|+|||++. ..++.++||||+||++|+|++|..||.........
T Consensus 153 ~Dfg~~~~~~~~-------~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~ 225 (272)
T cd06637 153 VDFGVSAQLDRT-------VGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRAL 225 (272)
T ss_pred ccCCCceecccc-------cccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHH
Confidence 999998754211 11223356888999999964 23788999999999999999999999654221110
Q ss_pred hhHHHHhcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCH
Q 005045 616 IHMFVSMALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAM 695 (717)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~ 695 (717)
. .. .....+.. ....++..+.+++.+||+.+|.+|||+
T Consensus 226 ~---~~-------~~~~~~~~--------------------------------~~~~~~~~~~~li~~~l~~~p~~Rpt~ 263 (272)
T cd06637 226 F---LI-------PRNPAPRL--------------------------------KSKKWSKKFQSFIESCLVKNHSQRPTT 263 (272)
T ss_pred H---HH-------hcCCCCCC--------------------------------CCCCcCHHHHHHHHHHcCCChhhCCCH
Confidence 0 00 00000000 011224567899999999999999999
Q ss_pred HHHHH
Q 005045 696 NVVVN 700 (717)
Q Consensus 696 ~eil~ 700 (717)
.|+++
T Consensus 264 ~~il~ 268 (272)
T cd06637 264 EQLMK 268 (272)
T ss_pred HHHhh
Confidence 99975
No 179
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=2.4e-35 Score=297.98 Aligned_cols=249 Identities=21% Similarity=0.292 Sum_probs=195.3
Q ss_pred ccccccccCcccccceEEEEeC-CCchhhhHHhHhh-hhhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceEEE
Q 005045 390 NFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQ-QQGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFKAL 467 (717)
Q Consensus 390 ~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~l 467 (717)
+|++.++||.|++|.||.++++ +++.+|+|.+... .....+.+..|+.+++.++|+||+++.+.+ ...+..++
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~l 75 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESF-----EADGHLYI 75 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEE-----EECCEEEE
Confidence 5889999999999999999965 7889999987543 233457788899999999999999999984 44568999
Q ss_pred EEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeeccc
Q 005045 468 VFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLA 547 (717)
Q Consensus 468 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~ 547 (717)
+|||++++++.+++..... ..+++..+..++.|++.|+.|||++ +++|+||+|+||+++.++.++++|||.+
T Consensus 76 v~e~~~~~~l~~~~~~~~~-----~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~ 147 (255)
T cd08219 76 VMEYCDGGDLMQKIKLQRG-----KLFPEDTILQWFVQMCLGVQHIHEK---RVLHRDIKSKNIFLTQNGKVKLGDFGSA 147 (255)
T ss_pred EEeeCCCCcHHHHHHhccC-----CCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEECCCCcEEEcccCcc
Confidence 9999999999998864321 4578999999999999999999998 9999999999999999999999999998
Q ss_pred hhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHHHhcCCh
Q 005045 548 KFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVSMALPD 626 (717)
Q Consensus 548 ~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 626 (717)
...... ........++..|+|||+..+ .++.++|+||||+++|+|++|..||........ ...
T Consensus 148 ~~~~~~-------~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~--~~~------- 211 (255)
T cd08219 148 RLLTSP-------GAYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNL--ILK------- 211 (255)
T ss_pred eeeccc-------ccccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHHH--HHH-------
Confidence 755211 111223558889999999765 488999999999999999999999965321110 000
Q ss_pred hhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHHH
Q 005045 627 HVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVNN 701 (717)
Q Consensus 627 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~~ 701 (717)
........ .+..++..+.+++.+||+.+|++|||+.||+..
T Consensus 212 ----~~~~~~~~------------------------------~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 212 ----VCQGSYKP------------------------------LPSHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred ----HhcCCCCC------------------------------CCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 00000000 011124457889999999999999999999864
No 180
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=3.7e-35 Score=301.45 Aligned_cols=261 Identities=24% Similarity=0.383 Sum_probs=198.0
Q ss_pred ccccccccccCcccccceEEEEeC------CCchhhhHHhHhhhh-hHHHHHHHHHHHHhcCCCCceeEEEEeeccccCC
Q 005045 388 TDNFSKENLIGTGSFGSVYKGTLG------DGTIVAIKVLKLQQQ-GALKSFIDECNALKSTRHRNILRVITACSSVDLE 460 (717)
Q Consensus 388 ~~~y~~~~~ig~g~~g~v~~~~~~------~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~ 460 (717)
..+|++.++||+|+||.||+|... .++.||+|++..... .....+..|+.+++.++||||+++++.+.
T Consensus 4 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~----- 78 (283)
T cd05091 4 LSTVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVT----- 78 (283)
T ss_pred HHHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-----
Confidence 356889999999999999999853 356799999875432 33567889999999999999999999853
Q ss_pred CCceEEEEEecCCCCChhhhccCCCCC---------cccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCE
Q 005045 461 GNDFKALVFEFMSNGNLDQWLHPSPAE---------HYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNV 531 (717)
Q Consensus 461 ~~~~~~lv~e~~~~~~L~~~l~~~~~~---------~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NI 531 (717)
.....++++||+++++|.+++...... ......+++..+..++.|++.|++|+|+. +++||||||+||
T Consensus 79 ~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~---gi~H~dlkp~Ni 155 (283)
T cd05091 79 KEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSH---HVVHKDLATRNV 155 (283)
T ss_pred CCCceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHc---Cccccccchhhe
Confidence 445789999999999999987532110 01124578889999999999999999997 999999999999
Q ss_pred EeCCCCceEEeeeccchhcccccCCCCCCcceeecccccccccCCCcc-CCCCCcccchhhHHHHHHHHHh-CCCCCCCC
Q 005045 532 LLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHM-NGQVSILGDIYSYGILLLEMFT-GKRPTGDM 609 (717)
Q Consensus 532 ll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~-~~~~~~~sDvwslG~vl~ellt-g~~p~~~~ 609 (717)
+++.++.+||+|||.++...... .........+++.|+|||.+ .+.++.++|||||||++|||++ |..||...
T Consensus 156 l~~~~~~~kl~Dfg~~~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~ 230 (283)
T cd05091 156 LVFDKLNVKISDLGLFREVYAAD-----YYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGY 230 (283)
T ss_pred EecCCCceEecccccccccccch-----heeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCC
Confidence 99999999999999987642111 11111223456789999995 4568999999999999999998 88888654
Q ss_pred CCCchhhhHHHHhcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCc
Q 005045 610 FKDDFSIHMFVSMALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSP 689 (717)
Q Consensus 610 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p 689 (717)
...+ .... +.+.... ..+.+++..+.+++.+||+.+|
T Consensus 231 ~~~~--~~~~-----------i~~~~~~------------------------------~~~~~~~~~~~~li~~cl~~~p 267 (283)
T cd05091 231 SNQD--VIEM-----------IRNRQVL------------------------------PCPDDCPAWVYTLMLECWNEFP 267 (283)
T ss_pred CHHH--HHHH-----------HHcCCcC------------------------------CCCCCCCHHHHHHHHHHhCCCc
Confidence 2211 1111 0111000 0122346678899999999999
Q ss_pred CCCCCHHHHHHHHHH
Q 005045 690 RERIAMNVVVNNLKT 704 (717)
Q Consensus 690 ~~Rps~~eil~~l~~ 704 (717)
++||+++||++.|++
T Consensus 268 ~~RP~~~~i~~~l~~ 282 (283)
T cd05091 268 SRRPRFKDIHSRLRT 282 (283)
T ss_pred ccCCCHHHHHHHhhC
Confidence 999999999999874
No 181
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=7e-35 Score=295.37 Aligned_cols=254 Identities=28% Similarity=0.460 Sum_probs=196.8
Q ss_pred cccccccccccCcccccceEEEEeCCCchhhhHHhHhhhhhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceEE
Q 005045 387 STDNFSKENLIGTGSFGSVYKGTLGDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFKA 466 (717)
Q Consensus 387 ~~~~y~~~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~ 466 (717)
..++|++.++||+|++|.||+|.++.+..+|+|.+.... ...+.+.+|+++++.++|+|++++++++. .+..+
T Consensus 4 ~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~------~~~~~ 76 (260)
T cd05069 4 PRESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT-MMPEAFLQEAQIMKKLRHDKLVPLYAVVS------EEPIY 76 (260)
T ss_pred ChHHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCC-ccHHHHHHHHHHHHhCCCCCeeeEEEEEc------CCCcE
Confidence 456799999999999999999998766679999876433 23466888999999999999999988742 23578
Q ss_pred EEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeecc
Q 005045 467 LVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGL 546 (717)
Q Consensus 467 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~ 546 (717)
++|||+++++|.+++..... ..+++..+..++.|++.||+|||+. +++|+||+|+||+++.++.++|+|||.
T Consensus 77 ~v~e~~~~~~L~~~~~~~~~-----~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dl~~~Nill~~~~~~~l~dfg~ 148 (260)
T cd05069 77 IVTEFMGKGSLLDFLKEGDG-----KYLKLPQLVDMAAQIADGMAYIERM---NYIHRDLRAANILVGDNLVCKIADFGL 148 (260)
T ss_pred EEEEcCCCCCHHHHHhhCCC-----CCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCeEEECCCcc
Confidence 99999999999999975421 4578999999999999999999997 999999999999999999999999999
Q ss_pred chhcccccCCCCCCcceeecccccccccCCCccC-CCCCcccchhhHHHHHHHHHh-CCCCCCCCCCCchhhhHHHHhcC
Q 005045 547 AKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMN-GQVSILGDIYSYGILLLEMFT-GKRPTGDMFKDDFSIHMFVSMAL 624 (717)
Q Consensus 547 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 624 (717)
+....... ........++..|+|||... +.++.++|||||||++|+|++ |..||....... .........
T Consensus 149 ~~~~~~~~------~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~--~~~~~~~~~ 220 (260)
T cd05069 149 ARLIEDNE------YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNRE--VLEQVERGY 220 (260)
T ss_pred ceEccCCc------ccccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHHHcCC
Confidence 87642111 11111233567899999965 458999999999999999999 899987542211 111111000
Q ss_pred ChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHHHHHH
Q 005045 625 PDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVNNLKT 704 (717)
Q Consensus 625 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~~l~~ 704 (717)
... .+.+.+..+.+++.+||..+|++||++++|++.|++
T Consensus 221 --------~~~---------------------------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 221 --------RMP---------------------------------CPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred --------CCC---------------------------------CCcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 000 011225568899999999999999999999999875
No 182
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=2.2e-35 Score=308.93 Aligned_cols=240 Identities=25% Similarity=0.312 Sum_probs=182.2
Q ss_pred cccCcccccceEEEEeC-CCchhhhHHhHhhh---hhHHHHHHHHH-HHHhcCCCCceeEEEEeeccccCCCCceEEEEE
Q 005045 395 NLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQ---QGALKSFIDEC-NALKSTRHRNILRVITACSSVDLEGNDFKALVF 469 (717)
Q Consensus 395 ~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~-~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~lv~ 469 (717)
+.||+|+||.||+|+++ +++.||+|++.... ......+..|. .+++.++||||+++++.+ ...+..++||
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~-----~~~~~~~lv~ 75 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSF-----QTADKLYFVL 75 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEE-----EcCCeEEEEE
Confidence 46899999999999965 67889999886432 12223334444 456788999999999884 4456899999
Q ss_pred ecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeeccchh
Q 005045 470 EFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKF 549 (717)
Q Consensus 470 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~ 549 (717)
||+++++|.+++... ..+++..+..++.||+.||+|||+. ||+||||||+||+++.++.+||+|||++..
T Consensus 76 e~~~~~~L~~~~~~~-------~~~~~~~~~~~~~qi~~~L~~lH~~---giiHrDlkp~Nili~~~~~~kl~DfG~a~~ 145 (325)
T cd05602 76 DYINGGELFYHLQRE-------RCFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKE 145 (325)
T ss_pred eCCCCCcHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEEccCCCCcc
Confidence 999999999998754 4578889999999999999999998 999999999999999999999999999875
Q ss_pred cccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHHHhcCChhh
Q 005045 550 LFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVSMALPDHV 628 (717)
Q Consensus 550 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 628 (717)
... .........|++.|+|||++.+ .++.++|||||||++|+|++|..||....... ..
T Consensus 146 ~~~-------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~--~~----------- 205 (325)
T cd05602 146 NIE-------HNGTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAE--MY----------- 205 (325)
T ss_pred ccc-------CCCCcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHH--HH-----------
Confidence 311 1112234568999999999765 48899999999999999999999996532111 00
Q ss_pred hhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHH
Q 005045 629 MDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVN 700 (717)
Q Consensus 629 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~ 700 (717)
..+....... ..+.+..+.+++.+|++.+|.+||++.+.+.
T Consensus 206 ~~i~~~~~~~-------------------------------~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~ 246 (325)
T cd05602 206 DNILNKPLQL-------------------------------KPNITNSARHLLEGLLQKDRTKRLGAKDDFM 246 (325)
T ss_pred HHHHhCCcCC-------------------------------CCCCCHHHHHHHHHHcccCHHHCCCCCCCHH
Confidence 0011111100 0112456788999999999999999875443
No 183
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=1e-34 Score=306.01 Aligned_cols=269 Identities=22% Similarity=0.366 Sum_probs=200.3
Q ss_pred ccccccccccccCcccccceEEEEe------CCCchhhhHHhHhhh-hhHHHHHHHHHHHHhcC-CCCceeEEEEeeccc
Q 005045 386 KSTDNFSKENLIGTGSFGSVYKGTL------GDGTIVAIKVLKLQQ-QGALKSFIDECNALKST-RHRNILRVITACSSV 457 (717)
Q Consensus 386 ~~~~~y~~~~~ig~g~~g~v~~~~~------~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~ 457 (717)
-+.++|++.+.||+|+||.||+|.+ .+++.||+|.+.... ......+.+|+.++.++ +||||+++++++.
T Consensus 4 ~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~-- 81 (343)
T cd05103 4 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACT-- 81 (343)
T ss_pred cchhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceee--
Confidence 4567999999999999999999973 257889999987532 23346788999999999 7899999998863
Q ss_pred cCCCCceEEEEEecCCCCChhhhccCCCCCc-------------------------------------------------
Q 005045 458 DLEGNDFKALVFEFMSNGNLDQWLHPSPAEH------------------------------------------------- 488 (717)
Q Consensus 458 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~------------------------------------------------- 488 (717)
..+...++||||+++|+|.+++.......
T Consensus 82 --~~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (343)
T cd05103 82 --KPGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLS 159 (343)
T ss_pred --cCCCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccc
Confidence 33456899999999999999886421100
Q ss_pred -----------ccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeeccchhcccccCCC
Q 005045 489 -----------YQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNP 557 (717)
Q Consensus 489 -----------~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~ 557 (717)
.....+++..+..++.||+.|++|||+. +|+||||||+||+++.++.+||+|||.+.......
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~--- 233 (343)
T cd05103 160 DVEEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDP--- 233 (343)
T ss_pred cchhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCccCeEEEcCCCcEEEEecccccccccCc---
Confidence 0012468888999999999999999997 99999999999999999999999999987642111
Q ss_pred CCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHh-CCCCCCCCCCCchhhhHHHHhcCChhhhhhcCCC
Q 005045 558 SKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFT-GKRPTGDMFKDDFSIHMFVSMALPDHVMDILDPS 635 (717)
Q Consensus 558 ~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 635 (717)
.........++..|+|||.+.+ .++.++|||||||++|+|++ |..||........ ........ ....
T Consensus 234 --~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~-~~~~~~~~--------~~~~ 302 (343)
T cd05103 234 --DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE-FCRRLKEG--------TRMR 302 (343)
T ss_pred --chhhcCCCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHH-HHHHHhcc--------CCCC
Confidence 1111122335677999999644 58999999999999999997 9999865422111 10000000 0000
Q ss_pred CCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHHHHHHHHHH
Q 005045 636 MPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVNNLKTIRNC 708 (717)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~~l~~i~~~ 708 (717)
. +...+..+.+++.+||+.+|++|||+.||++.|+.+.++
T Consensus 303 ~---------------------------------~~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~~~ 342 (343)
T cd05103 303 A---------------------------------PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 342 (343)
T ss_pred C---------------------------------CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 0 001134578899999999999999999999999998764
No 184
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=3.7e-35 Score=313.23 Aligned_cols=204 Identities=24% Similarity=0.296 Sum_probs=166.8
Q ss_pred ccccccccCcccccceEEEEeC-CCchhhhHHhHhh--hhhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceEE
Q 005045 390 NFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQ--QQGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFKA 466 (717)
Q Consensus 390 ~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~ 466 (717)
+|++.++||+|+||.||+|.++ +++.||+|.+... .....+++.+|+++++.++|+||+++++++...........|
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 4788999999999999999964 7899999988643 223456788999999999999999999986543222223789
Q ss_pred EEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeecc
Q 005045 467 LVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGL 546 (717)
Q Consensus 467 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~ 546 (717)
+||||+. ++|.+++... ..+++..+..++.||+.||+|||+. +++||||||+||+++.++.+||+|||+
T Consensus 81 lv~e~~~-~~l~~~~~~~-------~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~ 149 (372)
T cd07853 81 VVTELMQ-SDLHKIIVSP-------QPLSSDHVKVFLYQILRGLKYLHSA---GILHRDIKPGNLLVNSNCVLKICDFGL 149 (372)
T ss_pred EEeeccc-cCHHHHHhcC-------CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHHEEECCCCCEEeccccc
Confidence 9999995 6888877644 5689999999999999999999998 999999999999999999999999999
Q ss_pred chhcccccCCCCCCcceeecccccccccCCCccCC--CCCcccchhhHHHHHHHHHhCCCCCCCCC
Q 005045 547 AKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG--QVSILGDIYSYGILLLEMFTGKRPTGDMF 610 (717)
Q Consensus 547 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~sDvwslG~vl~elltg~~p~~~~~ 610 (717)
+...... .........++..|+|||++.+ .++.++||||+||++|||++|+.||....
T Consensus 150 a~~~~~~------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~ 209 (372)
T cd07853 150 ARVEEPD------ESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQS 209 (372)
T ss_pred eeecccC------ccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCC
Confidence 8754211 1111123457889999999765 37899999999999999999999997643
No 185
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=5.4e-35 Score=301.69 Aligned_cols=255 Identities=22% Similarity=0.323 Sum_probs=200.2
Q ss_pred ccccccccccccccccCcccccceEEEEe-CCCchhhhHHhHhhhhhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCC
Q 005045 382 SDISKSTDNFSKENLIGTGSFGSVYKGTL-GDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRVITACSSVDLE 460 (717)
Q Consensus 382 ~~~~~~~~~y~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~ 460 (717)
.+......+|++.+.+|.|++|.||.|.+ .+++.|++|.+..........+.+|+.+++.++||||+++++.+ .
T Consensus 12 ~~~~~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-----~ 86 (296)
T cd06655 12 VSIGDPKKKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSF-----L 86 (296)
T ss_pred HhcCCCcceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeE-----e
Confidence 34445567899999999999999999995 47899999988765544567788999999999999999999985 3
Q ss_pred CCceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceE
Q 005045 461 GNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAH 540 (717)
Q Consensus 461 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~k 540 (717)
..+..++||||+++++|.+++.. ..+++..+..++.|++.|++|||+. +++||||+|+||+++.++.+|
T Consensus 87 ~~~~~~lv~e~~~~~~L~~~~~~--------~~l~~~~~~~i~~~l~~al~~LH~~---~i~H~dL~p~Nili~~~~~~k 155 (296)
T cd06655 87 VGDELFVVMEYLAGGSLTDVVTE--------TCMDEAQIAAVCRECLQALEFLHAN---QVIHRDIKSDNVLLGMDGSVK 155 (296)
T ss_pred cCceEEEEEEecCCCcHHHHHHh--------cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEE
Confidence 45689999999999999998863 3478999999999999999999998 999999999999999999999
Q ss_pred EeeeccchhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHH
Q 005045 541 VGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMF 619 (717)
Q Consensus 541 l~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~ 619 (717)
|+|||.+....... .......++..|+|||.+.+ .++.++|||||||++|+|++|..||........ ....
T Consensus 156 l~dfg~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~-~~~~ 227 (296)
T cd06655 156 LTDFGFCAQITPEQ-------SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA-LYLI 227 (296)
T ss_pred EccCccchhccccc-------ccCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHH
Confidence 99999887642111 11122457889999999655 488999999999999999999999965432111 0000
Q ss_pred HHhcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHH
Q 005045 620 VSMALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVV 699 (717)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil 699 (717)
.... .+.. ..+.+++..+.+++.+||+.+|++|||+.+|+
T Consensus 228 ~~~~---------~~~~-------------------------------~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il 267 (296)
T cd06655 228 ATNG---------TPEL-------------------------------QNPEKLSPIFRDFLNRCLEMDVEKRGSAKELL 267 (296)
T ss_pred HhcC---------Cccc-------------------------------CCcccCCHHHHHHHHHHhhcChhhCCCHHHHh
Confidence 0000 0000 01122355678899999999999999999998
Q ss_pred H
Q 005045 700 N 700 (717)
Q Consensus 700 ~ 700 (717)
.
T Consensus 268 ~ 268 (296)
T cd06655 268 Q 268 (296)
T ss_pred h
Confidence 5
No 186
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=8.3e-35 Score=294.34 Aligned_cols=249 Identities=28% Similarity=0.444 Sum_probs=192.2
Q ss_pred cccCcccccceEEEEeC-C---CchhhhHHhHhhhh-hHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceEEEEE
Q 005045 395 NLIGTGSFGSVYKGTLG-D---GTIVAIKVLKLQQQ-GALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFKALVF 469 (717)
Q Consensus 395 ~~ig~g~~g~v~~~~~~-~---~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~lv~ 469 (717)
++||+|++|.||+|.+. . +..+|+|.+..... ...+.+.+|+++++.+.|+||+++++++. .+..++||
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~------~~~~~~v~ 74 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK------GEPLMLVM 74 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc------CCceEEEE
Confidence 47999999999999843 2 36799998875432 34567889999999999999999998753 23579999
Q ss_pred ecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeeccchh
Q 005045 470 EFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKF 549 (717)
Q Consensus 470 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~ 549 (717)
||+++++|.+++... ..+++..+..++.|++.|++|||.. +++||||||+||+++.++.+||+|||.+..
T Consensus 75 e~~~~~~L~~~l~~~-------~~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~nili~~~~~~kl~df~~~~~ 144 (257)
T cd05060 75 ELAPLGPLLKYLKKR-------REIPVSDLKELAHQVAMGMAYLESK---HFVHRDLAARNVLLVNRHQAKISDFGMSRA 144 (257)
T ss_pred EeCCCCcHHHHHHhC-------CCCCHHHHHHHHHHHHHHHHHHhhc---CeeccCcccceEEEcCCCcEEeccccccce
Confidence 999999999999755 4689999999999999999999997 999999999999999999999999999886
Q ss_pred cccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHh-CCCCCCCCCCCchhhhHHHHhcCChh
Q 005045 550 LFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFT-GKRPTGDMFKDDFSIHMFVSMALPDH 627 (717)
Q Consensus 550 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~ 627 (717)
....... ........++..|+|||.+.+ .++.++|||||||++|+|++ |..||...... ..........+
T Consensus 145 ~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~--~~~~~~~~~~~-- 216 (257)
T cd05060 145 LGAGSDY----YRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGA--EVIAMLESGER-- 216 (257)
T ss_pred eecCCcc----cccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHH--HHHHHHHcCCc--
Confidence 5321111 111111223567999999654 58999999999999999998 99999654221 11111111000
Q ss_pred hhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHHHHHHHH
Q 005045 628 VMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVNNLKTIR 706 (717)
Q Consensus 628 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~~l~~i~ 706 (717)
. +.+..++..+.+++.+||+.+|++|||+.++++.|+++.
T Consensus 217 --------~-------------------------------~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~~ 256 (257)
T cd05060 217 --------L-------------------------------PRPEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRDP 256 (257)
T ss_pred --------C-------------------------------CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhcc
Confidence 0 011223567889999999999999999999999998763
No 187
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=7.8e-35 Score=296.70 Aligned_cols=259 Identities=28% Similarity=0.487 Sum_probs=197.4
Q ss_pred ccccccccccCcccccceEEEEeC-CCc---hhhhHHhHhh-hhhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCC
Q 005045 388 TDNFSKENLIGTGSFGSVYKGTLG-DGT---IVAIKVLKLQ-QQGALKSFIDECNALKSTRHRNILRVITACSSVDLEGN 462 (717)
Q Consensus 388 ~~~y~~~~~ig~g~~g~v~~~~~~-~~~---~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~ 462 (717)
.++|++.+.||+|+||.||+|..+ +++ .||+|.+... .......+..|+.+++++.||||+++.+.+ ..+
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~-----~~~ 77 (269)
T cd05065 3 VSCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVV-----TKS 77 (269)
T ss_pred hHHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEE-----CCC
Confidence 356889999999999999999965 333 5999988754 344567899999999999999999999984 445
Q ss_pred ceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEe
Q 005045 463 DFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVG 542 (717)
Q Consensus 463 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~ 542 (717)
...++||||+++++|.+++.... ..+++..++.++.|++.|++|||+. |++||||+|+||+++.++.+||+
T Consensus 78 ~~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~i~~~l~~al~~lH~~---g~~H~dl~p~nili~~~~~~kl~ 148 (269)
T cd05065 78 RPVMIITEFMENGALDSFLRQND------GQFTVIQLVGMLRGIAAGMKYLSEM---NYVHRDLAARNILVNSNLVCKVS 148 (269)
T ss_pred CceEEEEecCCCCcHHHHHhhCC------CCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccChheEEEcCCCcEEEC
Confidence 57899999999999999987542 4578999999999999999999997 99999999999999999999999
Q ss_pred eeccchhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHh-CCCCCCCCCCCchhhhHHH
Q 005045 543 DFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFT-GKRPTGDMFKDDFSIHMFV 620 (717)
Q Consensus 543 Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~ 620 (717)
|||.+........... .........+..|+|||.+.+ .++.++|||||||++||+++ |..||...... ......
T Consensus 149 dfg~~~~~~~~~~~~~--~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~--~~~~~i 224 (269)
T cd05065 149 DFGLSRFLEDDTSDPT--YTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ--DVINAI 224 (269)
T ss_pred CCccccccccCccccc--cccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHH--HHHHHH
Confidence 9999876522111100 000011112457999999654 58999999999999999987 99998654221 111111
Q ss_pred HhcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHH
Q 005045 621 SMALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVN 700 (717)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~ 700 (717)
... ... +.+.+++..+.+++.+||+.+|++||++++|++
T Consensus 225 ~~~----------~~~-------------------------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 263 (269)
T cd05065 225 EQD----------YRL-------------------------------PPPMDCPTALHQLMLDCWQKDRNARPKFGQIVS 263 (269)
T ss_pred HcC----------CcC-------------------------------CCcccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 000 000 011234566789999999999999999999999
Q ss_pred HHHHH
Q 005045 701 NLKTI 705 (717)
Q Consensus 701 ~l~~i 705 (717)
.|+++
T Consensus 264 ~l~~~ 268 (269)
T cd05065 264 TLDKM 268 (269)
T ss_pred HHHhh
Confidence 98764
No 188
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=1.3e-34 Score=299.02 Aligned_cols=268 Identities=22% Similarity=0.397 Sum_probs=195.4
Q ss_pred cccccccccccCcccccceEEEEeCC---------------CchhhhHHhHhh-hhhHHHHHHHHHHHHhcCCCCceeEE
Q 005045 387 STDNFSKENLIGTGSFGSVYKGTLGD---------------GTIVAIKVLKLQ-QQGALKSFIDECNALKSTRHRNILRV 450 (717)
Q Consensus 387 ~~~~y~~~~~ig~g~~g~v~~~~~~~---------------~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~ni~~~ 450 (717)
..++|++.+.||+|+||.||+|.... ...||+|.+... .......+.+|++++++++|+|++++
T Consensus 3 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~ 82 (295)
T cd05097 3 PRQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRL 82 (295)
T ss_pred chHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeE
Confidence 35689999999999999999987532 224889988654 23445678899999999999999999
Q ss_pred EEeeccccCCCCceEEEEEecCCCCChhhhccCCCCC-----cccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecC
Q 005045 451 ITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAE-----HYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCD 525 (717)
Q Consensus 451 ~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~-----~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~d 525 (717)
++++. .....++||||+++++|.+++...... ......+++..++.++.|++.|++|||+. +++|||
T Consensus 83 ~~~~~-----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~d 154 (295)
T cd05097 83 LGVCV-----SDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASL---NFVHRD 154 (295)
T ss_pred EEEEc-----CCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhc---Ceeccc
Confidence 99963 345789999999999999988643210 00113468899999999999999999998 999999
Q ss_pred CCCCCEEeCCCCceEEeeeccchhcccccCCCCCCcceeecccccccccCCCcc-CCCCCcccchhhHHHHHHHHHh--C
Q 005045 526 LKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHM-NGQVSILGDIYSYGILLLEMFT--G 602 (717)
Q Consensus 526 lkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~-~~~~~~~sDvwslG~vl~ellt--g 602 (717)
|||+||+++.++.+||+|||.+...... ..........++..|+|||.. .+.++.++|||||||++|+|++ |
T Consensus 155 lkp~Nill~~~~~~kl~dfg~~~~~~~~-----~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~ 229 (295)
T cd05097 155 LATRNCLVGNHYTIKIADFGMSRNLYSG-----DYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCK 229 (295)
T ss_pred cChhhEEEcCCCcEEecccccccccccC-----cceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCC
Confidence 9999999999999999999998754211 111111223356789999995 4568999999999999999998 6
Q ss_pred CCCCCCCCCCchhhhHHHHhcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhh
Q 005045 603 KRPTGDMFKDDFSIHMFVSMALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGL 682 (717)
Q Consensus 603 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 682 (717)
..||.....+.. ..... +.........+ ...+..++..+.+++.
T Consensus 230 ~~p~~~~~~~~~--~~~~~--------~~~~~~~~~~~--------------------------~~~~~~~~~~l~~li~ 273 (295)
T cd05097 230 EQPYSLLSDEQV--IENTG--------EFFRNQGRQIY--------------------------LSQTPLCPSPVFKLMM 273 (295)
T ss_pred CCCCcccChHHH--HHHHH--------Hhhhhcccccc--------------------------CCCCCCCCHHHHHHHH
Confidence 677765322110 00000 00000000000 0001112567899999
Q ss_pred ccCCCCcCCCCCHHHHHHHHH
Q 005045 683 MCSTTSPRERIAMNVVVNNLK 703 (717)
Q Consensus 683 ~cl~~~p~~Rps~~eil~~l~ 703 (717)
+|++.+|++|||+.+|++.|.
T Consensus 274 ~~l~~~p~~RPs~~~i~~~l~ 294 (295)
T cd05097 274 RCWSRDIKDRPTFNKIHHFLR 294 (295)
T ss_pred HHcCCCchhCcCHHHHHHHHh
Confidence 999999999999999999885
No 189
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=4.6e-35 Score=329.51 Aligned_cols=263 Identities=22% Similarity=0.330 Sum_probs=198.7
Q ss_pred cccccccccccccccccCcccccceEEEEeC-CCchhhhHHhHhh--hhhHHHHHHHHHHHHhcCCCCceeEEEEeeccc
Q 005045 381 YSDISKSTDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQ--QQGALKSFIDECNALKSTRHRNILRVITACSSV 457 (717)
Q Consensus 381 ~~~~~~~~~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~ 457 (717)
+.+.....++|++.++||+|+||.||+|.+. +++.||+|++... .......+..|+.+++++.||||+++++++..
T Consensus 5 ~~~ge~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~d- 83 (1021)
T PTZ00266 5 YDDGESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLN- 83 (1021)
T ss_pred ccCCccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEe-
Confidence 4455566789999999999999999999965 6788999987643 23345678899999999999999999998643
Q ss_pred cCCCCceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcC----CCCeeecCCCCCCEEe
Q 005045 458 DLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHC----DTPIAHCDLKPSNVLL 533 (717)
Q Consensus 458 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~----~~~ivH~dlkp~NIll 533 (717)
.....+|+||||+++++|.+++..... ....+++..++.|+.||+.||+|||+.. .++||||||||+|||+
T Consensus 84 --e~~~~lyIVMEY~~gGSL~~lL~k~~~---~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL 158 (1021)
T PTZ00266 84 --KANQKLYILMEFCDAGDLSRNIQKCYK---MFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFL 158 (1021)
T ss_pred --cCCCEEEEEEeCCCCCcHHHHHHHHhh---ccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEe
Confidence 234578999999999999999864311 1146899999999999999999999852 1359999999999999
Q ss_pred CCC-----------------CceEEeeeccchhcccccCCCCCCcceeecccccccccCCCccCC---CCCcccchhhHH
Q 005045 534 DKD-----------------MTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG---QVSILGDIYSYG 593 (717)
Q Consensus 534 ~~~-----------------~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~---~~~~~sDvwslG 593 (717)
+.+ +.+||+|||++..... ........||+.|+|||++.+ .++.++||||||
T Consensus 159 ~s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~--------~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG 230 (1021)
T PTZ00266 159 STGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIGI--------ESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALG 230 (1021)
T ss_pred ecCccccccccccccccCCCCceEEccCCccccccc--------cccccccCCCccccCHHHHhccCCCCCchhHHHHHH
Confidence 642 3589999999875411 111223468999999999643 378999999999
Q ss_pred HHHHHHHhCCCCCCCCCCCchhhhHHHHhcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHH
Q 005045 594 ILLLEMFTGKRPTGDMFKDDFSIHMFVSMALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEEC 673 (717)
Q Consensus 594 ~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (717)
|++|+|++|..||........ +..... . .+.++ ...+
T Consensus 231 ~ILYELLTGk~PF~~~~~~~q-li~~lk--------~--~p~lp--------------------------------i~~~ 267 (1021)
T PTZ00266 231 CIIYELCSGKTPFHKANNFSQ-LISELK--------R--GPDLP--------------------------------IKGK 267 (1021)
T ss_pred HHHHHHHHCCCCCCcCCcHHH-HHHHHh--------c--CCCCC--------------------------------cCCC
Confidence 999999999999965321110 000000 0 00000 0111
Q ss_pred HHHHHHHhhccCCCCcCCCCCHHHHHH
Q 005045 674 FVSVLRIGLMCSTTSPRERIAMNVVVN 700 (717)
Q Consensus 674 ~~~l~~li~~cl~~~p~~Rps~~eil~ 700 (717)
+..+.+||.+||+.+|++|||+.|+++
T Consensus 268 S~eL~dLI~~~L~~dPeeRPSa~QlL~ 294 (1021)
T PTZ00266 268 SKELNILIKNLLNLSAKERPSALQCLG 294 (1021)
T ss_pred CHHHHHHHHHHhcCChhHCcCHHHHhc
Confidence 456788999999999999999999984
No 190
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=5e-35 Score=301.23 Aligned_cols=262 Identities=25% Similarity=0.451 Sum_probs=198.1
Q ss_pred cccccccccccCcccccceEEEEeC------CCchhhhHHhHhhh-hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccC
Q 005045 387 STDNFSKENLIGTGSFGSVYKGTLG------DGTIVAIKVLKLQQ-QGALKSFIDECNALKSTRHRNILRVITACSSVDL 459 (717)
Q Consensus 387 ~~~~y~~~~~ig~g~~g~v~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~ 459 (717)
..++|++.+.||+|+||.||.|..+ +++.+|+|.+.... ......+.+|+.+++++.||||+++++++.
T Consensus 3 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~---- 78 (288)
T cd05050 3 PRNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCA---- 78 (288)
T ss_pred ChHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEc----
Confidence 4578999999999999999999853 46789999886542 334567889999999999999999999853
Q ss_pred CCCceEEEEEecCCCCChhhhccCCCCCc---------------ccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeec
Q 005045 460 EGNDFKALVFEFMSNGNLDQWLHPSPAEH---------------YQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHC 524 (717)
Q Consensus 460 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~---------------~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~ 524 (717)
.++..++||||+++++|.+++....... .....+++..++.++.|++.||+|||+. +++||
T Consensus 79 -~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~---~i~H~ 154 (288)
T cd05050 79 -VGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSER---KFVHR 154 (288)
T ss_pred -CCCccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---Ceecc
Confidence 4457899999999999999986432100 0113578889999999999999999997 99999
Q ss_pred CCCCCCEEeCCCCceEEeeeccchhcccccCCCCCCcceeecccccccccCCCccC-CCCCcccchhhHHHHHHHHHh-C
Q 005045 525 DLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMN-GQVSILGDIYSYGILLLEMFT-G 602 (717)
Q Consensus 525 dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~sDvwslG~vl~ellt-g 602 (717)
||+|+||+++.++.++|+|||.+....... ..........+..|+|||.+. +.++.++|||||||++|+|++ |
T Consensus 155 dl~p~nil~~~~~~~~l~dfg~~~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~ 229 (288)
T cd05050 155 DLATRNCLVGENMVVKIADFGLSRNIYSAD-----YYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYG 229 (288)
T ss_pred cccHhheEecCCCceEECccccceecccCc-----cccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCC
Confidence 999999999999999999999987542111 011111223456799999965 458999999999999999998 8
Q ss_pred CCCCCCCCCCchhhhHHHHhcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhh
Q 005045 603 KRPTGDMFKDDFSIHMFVSMALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGL 682 (717)
Q Consensus 603 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 682 (717)
..||......+ ... .+.+..... .+..++..+.+++.
T Consensus 230 ~~p~~~~~~~~--~~~-----------~~~~~~~~~------------------------------~~~~~~~~l~~li~ 266 (288)
T cd05050 230 MQPYYGMAHEE--VIY-----------YVRDGNVLS------------------------------CPDNCPLELYNLMR 266 (288)
T ss_pred CCCCCCCCHHH--HHH-----------HHhcCCCCC------------------------------CCCCCCHHHHHHHH
Confidence 88886442211 100 000000000 01123567889999
Q ss_pred ccCCCCcCCCCCHHHHHHHHHH
Q 005045 683 MCSTTSPRERIAMNVVVNNLKT 704 (717)
Q Consensus 683 ~cl~~~p~~Rps~~eil~~l~~ 704 (717)
+|++.+|++|||+.|+++.|++
T Consensus 267 ~~l~~~p~~Rpt~~el~~~l~~ 288 (288)
T cd05050 267 LCWSKLPSDRPSFASINRILQR 288 (288)
T ss_pred HHcccCcccCCCHHHHHHHhhC
Confidence 9999999999999999998863
No 191
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=1.1e-34 Score=293.27 Aligned_cols=251 Identities=28% Similarity=0.456 Sum_probs=199.7
Q ss_pred cccccccccccCcccccceEEEEeCCCchhhhHHhHhhhhhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceEE
Q 005045 387 STDNFSKENLIGTGSFGSVYKGTLGDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFKA 466 (717)
Q Consensus 387 ~~~~y~~~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~ 466 (717)
..++|++.+.+|+|++|.||.|... |+.||+|.+..... ..+++.+|+.++++++|+||+++++.+. .....+
T Consensus 4 ~~~~~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~~~ 76 (256)
T cd05039 4 NSKELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVL-----QGNPLY 76 (256)
T ss_pred ChhhccceeeeecCCCceEEEEEec-CcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEc-----CCCCeE
Confidence 4668999999999999999999875 78899999876544 4578889999999999999999999953 345789
Q ss_pred EEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeecc
Q 005045 467 LVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGL 546 (717)
Q Consensus 467 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~ 546 (717)
+||||+++++|.+++..... ..+++..+..++.|++.|++|||+. +++||||+|+||+++.++.++|+|||.
T Consensus 77 ~v~e~~~~~~L~~~~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~Nili~~~~~~~l~d~g~ 148 (256)
T cd05039 77 IVTEYMAKGSLVDYLRSRGR-----AVITLAQQLGFALDVCEGMEYLEEK---NFVHRDLAARNVLVSEDLVAKVSDFGL 148 (256)
T ss_pred EEEEecCCCcHHHHHHhcCC-----CCCCHHHHHHHHHHHHHHHHHHHhC---CccchhcccceEEEeCCCCEEEccccc
Confidence 99999999999999875421 3689999999999999999999998 999999999999999999999999999
Q ss_pred chhcccccCCCCCCcceeecccccccccCCCccC-CCCCcccchhhHHHHHHHHHh-CCCCCCCCCCCchhhhHHHHhcC
Q 005045 547 AKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMN-GQVSILGDIYSYGILLLEMFT-GKRPTGDMFKDDFSIHMFVSMAL 624 (717)
Q Consensus 547 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 624 (717)
+....... .....+..|+|||.+. +.++.++||||||+++|++++ |..||....... ........
T Consensus 149 ~~~~~~~~----------~~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~--~~~~~~~~- 215 (256)
T cd05039 149 AKEASQGQ----------DSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD--VVPHVEKG- 215 (256)
T ss_pred cccccccc----------ccCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHH--HHHHHhcC-
Confidence 87651110 0122456799999964 568899999999999999997 999986542111 11111000
Q ss_pred ChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHHHHHH
Q 005045 625 PDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVNNLKT 704 (717)
Q Consensus 625 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~~l~~ 704 (717)
.... .+..++..+.+++.+||+.+|++|||+.|++++|+.
T Consensus 216 -------~~~~---------------------------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 255 (256)
T cd05039 216 -------YRME---------------------------------APEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLAL 255 (256)
T ss_pred -------CCCC---------------------------------CccCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhc
Confidence 0000 011225678899999999999999999999999875
Q ss_pred H
Q 005045 705 I 705 (717)
Q Consensus 705 i 705 (717)
+
T Consensus 256 ~ 256 (256)
T cd05039 256 I 256 (256)
T ss_pred C
Confidence 3
No 192
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=3.3e-35 Score=311.76 Aligned_cols=203 Identities=27% Similarity=0.275 Sum_probs=167.3
Q ss_pred ccccccccccccCcccccceEEEEeC-CCchhhhHHhHhh--hhhHHHHHHHHHHHHhcCCCCceeEEEEeecccc-CCC
Q 005045 386 KSTDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQ--QQGALKSFIDECNALKSTRHRNILRVITACSSVD-LEG 461 (717)
Q Consensus 386 ~~~~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~-~~~ 461 (717)
...++|++.+.||+|+||.||.|.+. .++.||+|.+... .......+.+|+.+++.++||||+++++++.... ...
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 93 (355)
T cd07874 14 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEE 93 (355)
T ss_pred hhhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccc
Confidence 35679999999999999999999965 7889999988643 2334567788999999999999999999864322 223
Q ss_pred CceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEE
Q 005045 462 NDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHV 541 (717)
Q Consensus 462 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl 541 (717)
....++||||++ +++.+.+. ..+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||
T Consensus 94 ~~~~~lv~e~~~-~~l~~~~~---------~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDikp~Nill~~~~~~kl 160 (355)
T cd07874 94 FQDVYLVMELMD-ANLCQVIQ---------MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKI 160 (355)
T ss_pred cceeEEEhhhhc-ccHHHHHh---------hcCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEECCCCCEEE
Confidence 346899999996 56777664 3478888999999999999999998 9999999999999999999999
Q ss_pred eeeccchhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHhCCCCCCCC
Q 005045 542 GDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRPTGDM 609 (717)
Q Consensus 542 ~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~ 609 (717)
+|||.++.... ........++..|+|||++.+ .++.++|||||||++|+|++|+.||...
T Consensus 161 ~Dfg~~~~~~~--------~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 221 (355)
T cd07874 161 LDFGLARTAGT--------SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 221 (355)
T ss_pred eeCcccccCCC--------ccccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 99999975411 111233568999999999765 4899999999999999999999999754
No 193
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=6.7e-35 Score=298.62 Aligned_cols=262 Identities=24% Similarity=0.430 Sum_probs=199.7
Q ss_pred ccccccccccccCcccccceEEEEeC------CCchhhhHHhHhhh-hhHHHHHHHHHHHHhcCCCCceeEEEEeecccc
Q 005045 386 KSTDNFSKENLIGTGSFGSVYKGTLG------DGTIVAIKVLKLQQ-QGALKSFIDECNALKSTRHRNILRVITACSSVD 458 (717)
Q Consensus 386 ~~~~~y~~~~~ig~g~~g~v~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~ 458 (717)
...++|++.+.||+|++|.||.|.++ .++.||+|.+.... ......+.+|+.+++.++|+||+++++.+.
T Consensus 3 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~--- 79 (277)
T cd05032 3 LPREKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVS--- 79 (277)
T ss_pred cchHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEc---
Confidence 34578999999999999999999854 24679999986442 234567889999999999999999999853
Q ss_pred CCCCceEEEEEecCCCCChhhhccCCCCCc---ccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCC
Q 005045 459 LEGNDFKALVFEFMSNGNLDQWLHPSPAEH---YQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDK 535 (717)
Q Consensus 459 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~---~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~ 535 (717)
.....++||||+++++|.+++....... .....+++..+..++.||+.|++|||+. +++||||+|+||+++.
T Consensus 80 --~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~di~p~nill~~ 154 (277)
T cd05032 80 --TGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAK---KFVHRDLAARNCMVAE 154 (277)
T ss_pred --CCCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccChheEEEcC
Confidence 4468999999999999999986532211 1124578899999999999999999997 9999999999999999
Q ss_pred CCceEEeeeccchhcccccCCCCCCcceeecccccccccCCCccC-CCCCcccchhhHHHHHHHHHh-CCCCCCCCCCCc
Q 005045 536 DMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMN-GQVSILGDIYSYGILLLEMFT-GKRPTGDMFKDD 613 (717)
Q Consensus 536 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~ 613 (717)
++.+||+|||.++....... ........++..|+|||.+. +.++.++|||||||++|++++ |..||.......
T Consensus 155 ~~~~kl~dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~ 229 (277)
T cd05032 155 DLTVKIGDFGMTRDIYETDY-----YRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEE 229 (277)
T ss_pred CCCEEECCcccchhhccCcc-----cccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHH
Confidence 99999999999876522111 11112234577899999964 568999999999999999998 999986532211
Q ss_pred hhhhHHHHhcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCC
Q 005045 614 FSIHMFVSMALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERI 693 (717)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp 693 (717)
...... +.... ..+..++..+.+++.+||+.+|++||
T Consensus 230 --~~~~~~-----------~~~~~------------------------------~~~~~~~~~~~~li~~~l~~~p~~Rp 266 (277)
T cd05032 230 --VLKFVI-----------DGGHL------------------------------DLPENCPDKLLELMRMCWQYNPKMRP 266 (277)
T ss_pred --HHHHHh-----------cCCCC------------------------------CCCCCCCHHHHHHHHHHcCCChhhCC
Confidence 111000 00000 01112256788999999999999999
Q ss_pred CHHHHHHHHH
Q 005045 694 AMNVVVNNLK 703 (717)
Q Consensus 694 s~~eil~~l~ 703 (717)
|+.|+++.|+
T Consensus 267 t~~~l~~~l~ 276 (277)
T cd05032 267 TFLEIVSSLK 276 (277)
T ss_pred CHHHHHHHhc
Confidence 9999999875
No 194
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=1.2e-34 Score=298.88 Aligned_cols=267 Identities=22% Similarity=0.281 Sum_probs=204.0
Q ss_pred CCcccccccccccccccccCcccccceEEEEeC-CCchhhhHHhHhhhhhHHHHHHHHHHHHhcC-CCCceeEEEEeecc
Q 005045 379 MSYSDISKSTDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQQGALKSFIDECNALKST-RHRNILRVITACSS 456 (717)
Q Consensus 379 ~s~~~~~~~~~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~ 456 (717)
+++.++..+.++|.+.+.+|+|++|.||+|..+ +++.+|+|++.... .....+.+|+.+++++ +|||++++++.+..
T Consensus 12 ~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~ 90 (291)
T cd06639 12 LGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS-DVDEEIEAEYNILQSLPNHPNVVKFYGMFYK 90 (291)
T ss_pred hhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc-cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEe
Confidence 567888889999999999999999999999964 78899999886432 2235667899999998 89999999998765
Q ss_pred ccCCCCceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCC
Q 005045 457 VDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKD 536 (717)
Q Consensus 457 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~ 536 (717)
......+..++||||+++++|.++++.... ....+++..++.++.|++.|++|||+. +++||||||+||+++.+
T Consensus 91 ~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~---~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~nili~~~ 164 (291)
T cd06639 91 ADKLVGGQLWLVLELCNGGSVTELVKGLLI---CGQRLDEAMISYILYGALLGLQHLHNN---RIIHRDVKGNNILLTTE 164 (291)
T ss_pred ccccCCCeeEEEEEECCCCcHHHHHHHhhh---cCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCC
Confidence 433334578999999999999998763211 114688999999999999999999997 99999999999999999
Q ss_pred CceEEeeeccchhcccccCCCCCCcceeecccccccccCCCccCC------CCCcccchhhHHHHHHHHHhCCCCCCCCC
Q 005045 537 MTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG------QVSILGDIYSYGILLLEMFTGKRPTGDMF 610 (717)
Q Consensus 537 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~------~~~~~sDvwslG~vl~elltg~~p~~~~~ 610 (717)
+.+||+|||.+....... .......++..|+|||.+.+ .++.++|||||||++|+|++|+.||....
T Consensus 165 ~~~kl~dfg~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~ 237 (291)
T cd06639 165 GGVKLVDFGVSAQLTSTR-------LRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMH 237 (291)
T ss_pred CCEEEeecccchhccccc-------ccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCc
Confidence 999999999987652111 11123457888999999643 25789999999999999999999997542
Q ss_pred CCchhhhHHHHhcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcC
Q 005045 611 KDDFSIHMFVSMALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPR 690 (717)
Q Consensus 611 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~ 690 (717)
.... ...... ..+ +... .+++....+.+++.+||+.+|+
T Consensus 238 ~~~~-~~~~~~-~~~--------~~~~-------------------------------~~~~~~~~l~~li~~~l~~~p~ 276 (291)
T cd06639 238 PVKT-LFKIPR-NPP--------PTLL-------------------------------HPEKWCRSFNHFISQCLIKDFE 276 (291)
T ss_pred HHHH-HHHHhc-CCC--------CCCC-------------------------------cccccCHHHHHHHHHHhhcChh
Confidence 2111 000000 000 0000 0112245688999999999999
Q ss_pred CCCCHHHHHH
Q 005045 691 ERIAMNVVVN 700 (717)
Q Consensus 691 ~Rps~~eil~ 700 (717)
+||++.|+++
T Consensus 277 ~Rps~~~il~ 286 (291)
T cd06639 277 ARPSVTHLLE 286 (291)
T ss_pred hCcCHHHHhc
Confidence 9999999986
No 195
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=5.3e-35 Score=306.06 Aligned_cols=193 Identities=26% Similarity=0.400 Sum_probs=162.8
Q ss_pred cccCcccccceEEEEeC-CCchhhhHHhHhhh---hhHHHHHHHHHHHHhcC-CCCceeEEEEeeccccCCCCceEEEEE
Q 005045 395 NLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQ---QGALKSFIDECNALKST-RHRNILRVITACSSVDLEGNDFKALVF 469 (717)
Q Consensus 395 ~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~~~~~~~~~~lv~ 469 (717)
+.||+|+||.||+|+.. +++.||+|++.... ....+.+..|+.++.++ +||+|+++++++ ...+..|+||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~-----~~~~~~~lv~ 75 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCF-----QTTSRLFLVI 75 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEE-----EeCCEEEEEE
Confidence 46899999999999965 78889999987542 33456788899999888 699999999984 4456899999
Q ss_pred ecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeeccchh
Q 005045 470 EFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKF 549 (717)
Q Consensus 470 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~ 549 (717)
||+++++|.+++... ..+++..+..++.||+.|++|||+. +++||||||+||+++.++.+||+|||.+..
T Consensus 76 e~~~~~~L~~~~~~~-------~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~ 145 (327)
T cd05617 76 EYVNGGDLMFHMQRQ-------RKLPEEHARFYAAEICIALNFLHER---GIIYRDLKLDNVLLDADGHIKLTDYGMCKE 145 (327)
T ss_pred eCCCCCcHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEeCCCCEEEecccccee
Confidence 999999999888654 5689999999999999999999997 999999999999999999999999999874
Q ss_pred cccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHhCCCCCCCC
Q 005045 550 LFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRPTGDM 609 (717)
Q Consensus 550 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~ 609 (717)
... .........|++.|+|||++.+ .++.++|||||||++|+|++|..||...
T Consensus 146 ~~~-------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~ 199 (327)
T cd05617 146 GLG-------PGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDII 199 (327)
T ss_pred ccC-------CCCceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCcc
Confidence 311 1111234568999999999655 5899999999999999999999999654
No 196
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=9.6e-35 Score=297.54 Aligned_cols=250 Identities=26% Similarity=0.406 Sum_probs=191.3
Q ss_pred cccccccccCcccccceEEEEe-CCCchhhhHHhHhh-hhhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceEE
Q 005045 389 DNFSKENLIGTGSFGSVYKGTL-GDGTIVAIKVLKLQ-QQGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFKA 466 (717)
Q Consensus 389 ~~y~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~ 466 (717)
++|++.++||+|++|.||+|.+ .+++.||+|.+... .......+.+|++++++++||||+++++.+.. .+..+
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-----~~~~~ 75 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFV-----ENRIS 75 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEE-----CCEEE
Confidence 3688999999999999999995 47889999988644 23345678899999999999999999999543 45789
Q ss_pred EEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeecc
Q 005045 467 LVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGL 546 (717)
Q Consensus 467 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~ 546 (717)
+||||++++++..+ ..+++..+..++.|++.|++|||+. +|+|+||||+||+++.++.++|+|||.
T Consensus 76 lv~e~~~~~~l~~~-----------~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nill~~~~~~~l~dfg~ 141 (279)
T cd06619 76 ICTEFMDGGSLDVY-----------RKIPEHVLGRIAVAVVKGLTYLWSL---KILHRDVKPSNMLVNTRGQVKLCDFGV 141 (279)
T ss_pred EEEecCCCCChHHh-----------hcCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCCHHHEEECCCCCEEEeeCCc
Confidence 99999999988654 2367888899999999999999998 999999999999999999999999999
Q ss_pred chhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHHHhcCC
Q 005045 547 AKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVSMALP 625 (717)
Q Consensus 547 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 625 (717)
+..... .......++..|+|||.+.+ .++.++|||||||++|+|++|..||.............
T Consensus 142 ~~~~~~---------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~------ 206 (279)
T cd06619 142 STQLVN---------SIAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPL------ 206 (279)
T ss_pred ceeccc---------ccccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchH------
Confidence 875411 11223468889999999655 48999999999999999999999997543221110000
Q ss_pred hhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHHH
Q 005045 626 DHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVNN 701 (717)
Q Consensus 626 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~~ 701 (717)
.......+...... .....+.++.+++.+|++.+|++||+++|+++.
T Consensus 207 ~~~~~~~~~~~~~~-----------------------------~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~ 253 (279)
T cd06619 207 QLLQCIVDEDPPVL-----------------------------PVGQFSEKFVHFITQCMRKQPKERPAPENLMDH 253 (279)
T ss_pred HHHHHHhccCCCCC-----------------------------CCCcCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 00000000000000 001124457899999999999999999999865
No 197
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.2e-34 Score=302.04 Aligned_cols=270 Identities=23% Similarity=0.407 Sum_probs=202.6
Q ss_pred ccccccccccccccCcccccceEEEEeC--------CCchhhhHHhHhhh-hhHHHHHHHHHHHHhcC-CCCceeEEEEe
Q 005045 384 ISKSTDNFSKENLIGTGSFGSVYKGTLG--------DGTIVAIKVLKLQQ-QGALKSFIDECNALKST-RHRNILRVITA 453 (717)
Q Consensus 384 ~~~~~~~y~~~~~ig~g~~g~v~~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~ni~~~~~~ 453 (717)
+....++|.+.++||+|++|.||+|+.. ....+|+|.+.... ......+..|+++++++ +||||++++++
T Consensus 7 ~~~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~ 86 (314)
T cd05099 7 WEFPRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGV 86 (314)
T ss_pred ccccHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEE
Confidence 3456689999999999999999999742 24568888876432 33456788899999999 69999999998
Q ss_pred eccccCCCCceEEEEEecCCCCChhhhccCCCCC---------cccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeec
Q 005045 454 CSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAE---------HYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHC 524 (717)
Q Consensus 454 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~---------~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~ 524 (717)
+. ..+..+++|||+++++|.+++...... ......+++..+..++.||+.|++|||+. |++||
T Consensus 87 ~~-----~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~ 158 (314)
T cd05099 87 CT-----QEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESR---RCIHR 158 (314)
T ss_pred Ec-----cCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHC---Ceeec
Confidence 53 345789999999999999998653210 01124588999999999999999999997 99999
Q ss_pred CCCCCCEEeCCCCceEEeeeccchhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHh-C
Q 005045 525 DLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFT-G 602 (717)
Q Consensus 525 dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~ellt-g 602 (717)
||||+||+++.++.+||+|||.++....... ........++..|+|||.+.+ .++.++|||||||++|+|++ |
T Consensus 159 dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g 233 (314)
T cd05099 159 DLAARNVLVTEDNVMKIADFGLARGVHDIDY-----YKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLG 233 (314)
T ss_pred cccceeEEEcCCCcEEEcccccccccccccc-----ccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCC
Confidence 9999999999999999999999976522111 011111223467999999654 58899999999999999999 8
Q ss_pred CCCCCCCCCCchhhhHHHHhcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhh
Q 005045 603 KRPTGDMFKDDFSIHMFVSMALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGL 682 (717)
Q Consensus 603 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 682 (717)
..||......+ ...... ..... +.+..++.++.+++.
T Consensus 234 ~~p~~~~~~~~--~~~~~~------------~~~~~-----------------------------~~~~~~~~~l~~li~ 270 (314)
T cd05099 234 GSPYPGIPVEE--LFKLLR------------EGHRM-----------------------------DKPSNCTHELYMLMR 270 (314)
T ss_pred CCCCCCCCHHH--HHHHHH------------cCCCC-----------------------------CCCCCCCHHHHHHHH
Confidence 89986542211 110000 00000 011223556789999
Q ss_pred ccCCCCcCCCCCHHHHHHHHHHHHHHH
Q 005045 683 MCSTTSPRERIAMNVVVNNLKTIRNCF 709 (717)
Q Consensus 683 ~cl~~~p~~Rps~~eil~~l~~i~~~~ 709 (717)
+|++.+|++|||+.|+++.|.++....
T Consensus 271 ~cl~~~p~~Rps~~~ll~~l~~~~~~~ 297 (314)
T cd05099 271 ECWHAVPTQRPTFKQLVEALDKVLAAV 297 (314)
T ss_pred HHcCCCcccCcCHHHHHHHHHHHHHHh
Confidence 999999999999999999999987654
No 198
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=9.2e-35 Score=303.65 Aligned_cols=203 Identities=21% Similarity=0.272 Sum_probs=159.0
Q ss_pred ccccCcccccceEEEEeC---CCchhhhHHhHhhhhhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceEEEEEe
Q 005045 394 ENLIGTGSFGSVYKGTLG---DGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFKALVFE 470 (717)
Q Consensus 394 ~~~ig~g~~g~v~~~~~~---~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~lv~e 470 (717)
.++||+|+||.||+|+.+ +++.||+|.+.... ....+.+|++++++++||||+++++.+.. ......+++||
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~---~~~~~~~lv~e 80 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLS---HADRKVWLLFD 80 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC--CcHHHHHHHHHHHhcCCCCCcceeeeEec---CCCcEEEEEEe
Confidence 468999999999999854 56789999876432 22456789999999999999999988643 23457899999
Q ss_pred cCCCCChhhhccCCCCCc--ccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEe----CCCCceEEeee
Q 005045 471 FMSNGNLDQWLHPSPAEH--YQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLL----DKDMTAHVGDF 544 (717)
Q Consensus 471 ~~~~~~L~~~l~~~~~~~--~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll----~~~~~~kl~Df 544 (717)
|+. +++.+++....... .....+++..++.++.||+.||+|||+. +|+||||||+||++ +.++.+||+||
T Consensus 81 ~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivHrDlkp~Nil~~~~~~~~~~~kl~Df 156 (317)
T cd07868 81 YAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADM 156 (317)
T ss_pred ccC-CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEecCCCCcCcEEEeec
Confidence 985 68888775322111 1123589999999999999999999998 99999999999999 45679999999
Q ss_pred ccchhcccccCCCCCCcceeecccccccccCCCccCC--CCCcccchhhHHHHHHHHHhCCCCCCCC
Q 005045 545 GLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG--QVSILGDIYSYGILLLEMFTGKRPTGDM 609 (717)
Q Consensus 545 g~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~sDvwslG~vl~elltg~~p~~~~ 609 (717)
|.+....... ..........+|+.|+|||++.+ .++.++||||+||++|+|++|..||...
T Consensus 157 G~a~~~~~~~----~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~ 219 (317)
T cd07868 157 GFARLFNSPL----KPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred CceeccCCCC----ccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCC
Confidence 9997652111 11112234568999999999755 3789999999999999999999999754
No 199
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=5.8e-35 Score=313.22 Aligned_cols=197 Identities=26% Similarity=0.301 Sum_probs=164.3
Q ss_pred ccccccccccCcccccceEEEEeC---CCchhhhHHhHhhhhhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCce
Q 005045 388 TDNFSKENLIGTGSFGSVYKGTLG---DGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDF 464 (717)
Q Consensus 388 ~~~y~~~~~ig~g~~g~v~~~~~~---~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 464 (717)
..+|.+.+.||+|++|.||.|... .++.|++|.+... ....+|++++++++||||+++++.+ .....
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~-----~~~~~ 160 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAY-----RWKST 160 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeE-----eeCCE
Confidence 458999999999999999999743 4677899987633 2345799999999999999999884 34558
Q ss_pred EEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeee
Q 005045 465 KALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDF 544 (717)
Q Consensus 465 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Df 544 (717)
.|+|||++. +++.+++... ..+++..++.++.||+.||+|||+. +|+||||||+||+++.++.++|+||
T Consensus 161 ~~lv~e~~~-~~l~~~l~~~-------~~l~~~~~~~i~~ql~~aL~~LH~~---givHrDlkp~Nill~~~~~~~l~Df 229 (392)
T PHA03207 161 VCMVMPKYK-CDLFTYVDRS-------GPLPLEQAITIQRRLLEALAYLHGR---GIIHRDVKTENIFLDEPENAVLGDF 229 (392)
T ss_pred EEEEehhcC-CCHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEccC
Confidence 999999995 6888888533 5689999999999999999999997 9999999999999999999999999
Q ss_pred ccchhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHhCCCCCCCCC
Q 005045 545 GLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRPTGDMF 610 (717)
Q Consensus 545 g~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~ 610 (717)
|++....... .........||+.|+|||++.+ .++.++|||||||++|||++|..||....
T Consensus 230 G~a~~~~~~~-----~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~ 291 (392)
T PHA03207 230 GAACKLDAHP-----DTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQ 291 (392)
T ss_pred ccccccCccc-----ccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCC
Confidence 9987652211 1112234568999999999765 48999999999999999999999997653
No 200
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=7.4e-35 Score=314.07 Aligned_cols=196 Identities=24% Similarity=0.326 Sum_probs=162.3
Q ss_pred cccccccccccCcccccceEEEEeC-CCchhhhHHhHhhhhhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceE
Q 005045 387 STDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFK 465 (717)
Q Consensus 387 ~~~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~ 465 (717)
...+|.+.+.||+|+||.||+|.+. .++.||+|... ...+.+|++++++++|+||+++++++. ..+..
T Consensus 167 ~~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~------~~~~~~E~~iL~~L~HpnIv~l~~~~~-----~~~~~ 235 (461)
T PHA03211 167 AGLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW------YASSVHEARLLRRLSHPAVLALLDVRV-----VGGLT 235 (461)
T ss_pred ccCCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc------ccCHHHHHHHHHHCCCCCCCcEEEEEE-----ECCEE
Confidence 3558999999999999999999965 68889999633 234568999999999999999999854 34588
Q ss_pred EEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeec
Q 005045 466 ALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFG 545 (717)
Q Consensus 466 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg 545 (717)
++|||++ .++|.+++.... ..+++..++.++.||+.||.|||+. +|+||||||+||+++.++.+||+|||
T Consensus 236 ~lv~e~~-~~~L~~~l~~~~------~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDLKP~NILl~~~~~vkL~DFG 305 (461)
T PHA03211 236 CLVLPKY-RSDLYTYLGARL------RPLGLAQVTAVARQLLSAIDYIHGE---GIIHRDIKTENVLVNGPEDICLGDFG 305 (461)
T ss_pred EEEEEcc-CCCHHHHHHhcC------CCCCHHHHHHHHHHHHHHHHHHHHC---CEEECcCCHHHEEECCCCCEEEcccC
Confidence 9999999 478888876432 4689999999999999999999997 99999999999999999999999999
Q ss_pred cchhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHhCCCCCCC
Q 005045 546 LAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRPTGD 608 (717)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~elltg~~p~~~ 608 (717)
+++...... .........||..|+|||++.+ .++.++|||||||++|||++|..|+..
T Consensus 306 la~~~~~~~-----~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~ 364 (461)
T PHA03211 306 AACFARGSW-----STPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFS 364 (461)
T ss_pred Cceeccccc-----ccccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCccc
Confidence 987652111 1111223568999999999755 489999999999999999998876543
No 201
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=1.7e-34 Score=298.91 Aligned_cols=261 Identities=25% Similarity=0.376 Sum_probs=199.5
Q ss_pred cccccccccccccCcccccceEEEEeC------CCchhhhHHhHhhh-hhHHHHHHHHHHHHhcC-CCCceeEEEEeecc
Q 005045 385 SKSTDNFSKENLIGTGSFGSVYKGTLG------DGTIVAIKVLKLQQ-QGALKSFIDECNALKST-RHRNILRVITACSS 456 (717)
Q Consensus 385 ~~~~~~y~~~~~ig~g~~g~v~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~ 456 (717)
.-..++|.+.+.||+|+||.||+|... .+..||+|.+.... ....+.+.+|+++++++ +|+||+++++.+.
T Consensus 31 ~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~- 109 (302)
T cd05055 31 EFPRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACT- 109 (302)
T ss_pred cccHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEe-
Confidence 345578999999999999999999731 34578999876442 34456788999999999 7999999999853
Q ss_pred ccCCCCceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCC
Q 005045 457 VDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKD 536 (717)
Q Consensus 457 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~ 536 (717)
..+..++||||+++++|.+++..... ..+++.++..++.|++.|++|||+. +++|+||||+||+++.+
T Consensus 110 ----~~~~~~lv~e~~~~~~L~~~i~~~~~-----~~l~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~ 177 (302)
T cd05055 110 ----IGGPILVITEYCCYGDLLNFLRRKRE-----SFLTLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNVLLTHG 177 (302)
T ss_pred ----cCCceEEEEEcCCCCcHHHHHHhCCC-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeehhhhccceEEEcCC
Confidence 34578999999999999999875321 3379999999999999999999997 99999999999999999
Q ss_pred CceEEeeeccchhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHh-CCCCCCCCCCCch
Q 005045 537 MTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFT-GKRPTGDMFKDDF 614 (717)
Q Consensus 537 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~ 614 (717)
+.++++|||.+....... .........++..|+|||.+.+ .++.++||||+||++|+|++ |..||......+.
T Consensus 178 ~~~~l~dfg~~~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~ 252 (302)
T cd05055 178 KIVKICDFGLARDIMNDS-----NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSK 252 (302)
T ss_pred CeEEECCCcccccccCCC-----ceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHH
Confidence 999999999987652111 0111122345678999998654 58999999999999999998 9999875432211
Q ss_pred hhhHHHHhcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCC
Q 005045 615 SIHMFVSMALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIA 694 (717)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps 694 (717)
.... ++...... .+...+..+.+++.+|++.+|++|||
T Consensus 253 -~~~~------------~~~~~~~~-----------------------------~~~~~~~~~~~li~~cl~~~p~~Rpt 290 (302)
T cd05055 253 -FYKL------------IKEGYRMA-----------------------------QPEHAPAEIYDIMKTCWDADPLKRPT 290 (302)
T ss_pred -HHHH------------HHcCCcCC-----------------------------CCCCCCHHHHHHHHHHcCCCchhCcC
Confidence 1000 00000000 00011456789999999999999999
Q ss_pred HHHHHHHHHHH
Q 005045 695 MNVVVNNLKTI 705 (717)
Q Consensus 695 ~~eil~~l~~i 705 (717)
+.|+++.|+++
T Consensus 291 ~~ell~~l~~~ 301 (302)
T cd05055 291 FKQIVQLIGKQ 301 (302)
T ss_pred HHHHHHHHHhh
Confidence 99999999874
No 202
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=2.7e-35 Score=308.24 Aligned_cols=241 Identities=26% Similarity=0.328 Sum_probs=183.5
Q ss_pred cccCcccccceEEEEeC-CCchhhhHHhHhhh---hhHHHHHHHHHH-HHhcCCCCceeEEEEeeccccCCCCceEEEEE
Q 005045 395 NLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQ---QGALKSFIDECN-ALKSTRHRNILRVITACSSVDLEGNDFKALVF 469 (717)
Q Consensus 395 ~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~-~l~~l~h~ni~~~~~~~~~~~~~~~~~~~lv~ 469 (717)
+.||+|+||.||.|+.+ +|+.||+|++.... ......+..|.. +++.++||||+++++.+ ...+..++||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~-----~~~~~~~lv~ 75 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSF-----QTTEKLYFVL 75 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEE-----ecCCEEEEEE
Confidence 46899999999999965 78999999886432 223344555554 56778999999999884 4456899999
Q ss_pred ecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeeccchh
Q 005045 470 EFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKF 549 (717)
Q Consensus 470 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~ 549 (717)
||+++++|.+++... ..+++..+..++.||+.||+|||+. ||+||||||+||+++.++.+||+|||++..
T Consensus 76 e~~~~~~L~~~l~~~-------~~~~~~~~~~~~~qi~~al~~lH~~---givH~Dlkp~NIll~~~~~~kL~DfG~~~~ 145 (325)
T cd05604 76 DFVNGGELFFHLQRE-------RSFPEPRARFYAAEIASALGYLHSI---NIVYRDLKPENILLDSQGHVVLTDFGLCKE 145 (325)
T ss_pred cCCCCCCHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEeecCCccc
Confidence 999999999888754 5689999999999999999999997 999999999999999999999999999874
Q ss_pred cccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHHHhcCChhh
Q 005045 550 LFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVSMALPDHV 628 (717)
Q Consensus 550 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 628 (717)
... .........|++.|+|||++.+ .++.++|||||||++|+|++|..||....... . .
T Consensus 146 ~~~-------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~--~-----------~ 205 (325)
T cd05604 146 GIA-------QSDTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAE--M-----------Y 205 (325)
T ss_pred CCC-------CCCCcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHH--H-----------H
Confidence 311 1111233568999999999765 48899999999999999999999996532111 0 0
Q ss_pred hhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHHH
Q 005045 629 MDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVNN 701 (717)
Q Consensus 629 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~~ 701 (717)
..+........ +..+..+.+++.+|++.+|.+||++++.++.
T Consensus 206 ~~~~~~~~~~~-------------------------------~~~~~~~~~ll~~ll~~~p~~R~~~~~~~~~ 247 (325)
T cd05604 206 DNILHKPLVLR-------------------------------PGASLTAWSILEELLEKDRQRRLGAKEDFLE 247 (325)
T ss_pred HHHHcCCccCC-------------------------------CCCCHHHHHHHHHHhccCHHhcCCCCCCHHH
Confidence 11111111100 0114456789999999999999988644433
No 203
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=1.1e-34 Score=297.65 Aligned_cols=251 Identities=22% Similarity=0.324 Sum_probs=195.1
Q ss_pred cccccccccCcccccceEEEEeC-CCchhhhHHhHhhhhhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceEEE
Q 005045 389 DNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFKAL 467 (717)
Q Consensus 389 ~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~l 467 (717)
+-|++.++||+|++|.||+|... ++..+++|.+..........+.+|+++++.++|||++++++.+. .....++
T Consensus 5 ~~~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~-----~~~~~~~ 79 (282)
T cd06643 5 EFWEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY-----YENNLWI 79 (282)
T ss_pred HHHHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEe-----eCCEEEE
Confidence 34789999999999999999965 67888999887655555677889999999999999999999854 3458899
Q ss_pred EEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeeccc
Q 005045 468 VFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLA 547 (717)
Q Consensus 468 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~ 547 (717)
||||++++++.+++.... ..+++..+..++.|++.||+|||+. +++||||+|+||+++.++.+||+|||.+
T Consensus 80 v~e~~~~~~l~~~~~~~~------~~l~~~~~~~~~~qi~~~L~~LH~~---~i~H~dlkp~nili~~~~~~kl~dfg~~ 150 (282)
T cd06643 80 LIEFCAGGAVDAVMLELE------RPLTEPQIRVVCKQTLEALNYLHEN---KIIHRDLKAGNILFTLDGDIKLADFGVS 150 (282)
T ss_pred EEEecCCCcHHHHHHhcC------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEccCCCEEEcccccc
Confidence 999999999998876432 4689999999999999999999997 9999999999999999999999999998
Q ss_pred hhcccccCCCCCCcceeecccccccccCCCccC------CCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHHH
Q 005045 548 KFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMN------GQVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVS 621 (717)
Q Consensus 548 ~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~------~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~ 621 (717)
...... ........++..|+|||++. ..++.++|||||||++|+|++|..||.......... ...
T Consensus 151 ~~~~~~-------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~--~~~ 221 (282)
T cd06643 151 AKNTRT-------IQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLL--KIA 221 (282)
T ss_pred cccccc-------ccccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHH--HHh
Confidence 754211 11122345888999999863 236789999999999999999999986543211100 000
Q ss_pred hcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHHH
Q 005045 622 MALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVNN 701 (717)
Q Consensus 622 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~~ 701 (717)
... .+... .+..++..+.+++.+||+.+|++|||+.++++.
T Consensus 222 ~~~--------~~~~~-------------------------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 262 (282)
T cd06643 222 KSE--------PPTLA-------------------------------QPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQH 262 (282)
T ss_pred hcC--------CCCCC-------------------------------CccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000 00000 011224567899999999999999999998753
No 204
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=1.2e-34 Score=293.34 Aligned_cols=239 Identities=23% Similarity=0.416 Sum_probs=184.3
Q ss_pred cccCcccccceEEEEeC-C-------CchhhhHHhHhhhhhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceEE
Q 005045 395 NLIGTGSFGSVYKGTLG-D-------GTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFKA 466 (717)
Q Consensus 395 ~~ig~g~~g~v~~~~~~-~-------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~ 466 (717)
+.||+|+||.||+|..+ . ...+++|.+........+.+.+|+.+++.+.||||+++++.+.. +...+
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~-----~~~~~ 75 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVC-----GDESI 75 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEe-----CCCcE
Confidence 46899999999999853 2 33588999876655556788899999999999999999998643 34789
Q ss_pred EEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCc--------
Q 005045 467 LVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMT-------- 538 (717)
Q Consensus 467 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~-------- 538 (717)
+||||+++++|.+++.... ..+++..++.++.||+.|++|||+. +++||||||+||+++.++.
T Consensus 76 lv~e~~~~g~L~~~l~~~~------~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~~~~~~~~ 146 (258)
T cd05078 76 MVQEYVKFGSLDTYLKKNK------NLINISWKLEVAKQLAWALHFLEDK---GLTHGNVCAKNVLLIREEDRKTGNPPF 146 (258)
T ss_pred EEEecCCCCcHHHHHhcCC------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEEEecccccccCCCce
Confidence 9999999999999997653 3578999999999999999999997 9999999999999987764
Q ss_pred eEEeeeccchhcccccCCCCCCcceeecccccccccCCCccCC--CCCcccchhhHHHHHHHHHhCC-CCCCCCCCCchh
Q 005045 539 AHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG--QVSILGDIYSYGILLLEMFTGK-RPTGDMFKDDFS 615 (717)
Q Consensus 539 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~sDvwslG~vl~elltg~-~p~~~~~~~~~~ 615 (717)
++++|||.+..... .....++..|+|||++.+ .++.++|||||||++|+|++|. .||........
T Consensus 147 ~~l~d~g~~~~~~~-----------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~- 214 (258)
T cd05078 147 IKLSDPGISITVLP-----------KEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKK- 214 (258)
T ss_pred EEecccccccccCC-----------chhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHH-
Confidence 69999998865411 112447788999999765 3789999999999999999985 55543211110
Q ss_pred hhHHHHhcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCH
Q 005045 616 IHMFVSMALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAM 695 (717)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~ 695 (717)
...... ...++ .....++.+++.+||+.+|++|||+
T Consensus 215 -~~~~~~----------~~~~~---------------------------------~~~~~~~~~li~~~l~~~p~~Rps~ 250 (258)
T cd05078 215 -LQFYED----------RHQLP---------------------------------APKWTELANLINQCMDYEPDFRPSF 250 (258)
T ss_pred -HHHHHc----------cccCC---------------------------------CCCcHHHHHHHHHHhccChhhCCCH
Confidence 000000 00000 0113457899999999999999999
Q ss_pred HHHHHHHH
Q 005045 696 NVVVNNLK 703 (717)
Q Consensus 696 ~eil~~l~ 703 (717)
+||++.|+
T Consensus 251 ~~il~~l~ 258 (258)
T cd05078 251 RAIIRDLN 258 (258)
T ss_pred HHHHHhcC
Confidence 99998863
No 205
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=9.2e-35 Score=308.83 Aligned_cols=208 Identities=23% Similarity=0.337 Sum_probs=174.2
Q ss_pred CcccccccccccccccccCcccccceEEEEeC-CCchhhhHHhHhh---hhhHHHHHHHHHHHHhcCCCCceeEEEEeec
Q 005045 380 SYSDISKSTDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQ---QQGALKSFIDECNALKSTRHRNILRVITACS 455 (717)
Q Consensus 380 s~~~~~~~~~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~ 455 (717)
.+.++....++|++.+.||+|+||.||+|+++ +++.||+|++... .......+.+|+.+++.++||||+++++.+
T Consensus 34 ~~~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~- 112 (371)
T cd05622 34 KIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAF- 112 (371)
T ss_pred HHhhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEE-
Confidence 35566777899999999999999999999966 7888999987542 223345678899999999999999999884
Q ss_pred cccCCCCceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCC
Q 005045 456 SVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDK 535 (717)
Q Consensus 456 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~ 535 (717)
.++...++||||+++++|.+++.. ..+++..+..++.||+.||+|||+. +|+||||||+||+++.
T Consensus 113 ----~~~~~~~lv~Ey~~gg~L~~~~~~--------~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NIll~~ 177 (371)
T cd05622 113 ----QDDRYLYMVMEYMPGGDLVNLMSN--------YDVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDK 177 (371)
T ss_pred ----EcCCEEEEEEcCCCCCcHHHHHHh--------cCCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHEEECC
Confidence 445689999999999999999864 3478888999999999999999998 9999999999999999
Q ss_pred CCceEEeeeccchhcccccCCCCCCcceeecccccccccCCCccCC-----CCCcccchhhHHHHHHHHHhCCCCCCCC
Q 005045 536 DMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-----QVSILGDIYSYGILLLEMFTGKRPTGDM 609 (717)
Q Consensus 536 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-----~~~~~sDvwslG~vl~elltg~~p~~~~ 609 (717)
++.+||+|||.+...... .........||+.|+|||++.+ .++.++|||||||++|||++|..||...
T Consensus 178 ~~~ikL~DfG~a~~~~~~------~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~ 250 (371)
T cd05622 178 SGHLKLADFGTCMKMNKE------GMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYAD 250 (371)
T ss_pred CCCEEEEeCCceeEcCcC------CcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCC
Confidence 999999999998765211 1111234568999999999653 2688999999999999999999999653
No 206
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=1e-34 Score=293.50 Aligned_cols=249 Identities=25% Similarity=0.372 Sum_probs=198.0
Q ss_pred ccccccccccCcccccceEEEEeC-CCchhhhHHhHhhhhhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceEE
Q 005045 388 TDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFKA 466 (717)
Q Consensus 388 ~~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~ 466 (717)
.++|++.+++|+|++|.||.|... +++.+++|.+..... ...+.+|++++++++|+||+++++.+. .....|
T Consensus 2 ~~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~-----~~~~~~ 74 (256)
T cd06612 2 EEVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYF-----KNTDLW 74 (256)
T ss_pred cccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeee-----cCCcEE
Confidence 578999999999999999999976 588999999875543 578899999999999999999999853 446899
Q ss_pred EEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeecc
Q 005045 467 LVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGL 546 (717)
Q Consensus 467 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~ 546 (717)
+++||+++++|.+++.... ..+++..+..++.|++.|+.|||+. +++||||+|+||+++.++.++|+|||.
T Consensus 75 l~~e~~~~~~L~~~l~~~~------~~l~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~ni~~~~~~~~~l~dfg~ 145 (256)
T cd06612 75 IVMEYCGAGSVSDIMKITN------KTLTEEEIAAILYQTLKGLEYLHSN---KKIHRDIKAGNILLNEEGQAKLADFGV 145 (256)
T ss_pred EEEecCCCCcHHHHHHhCc------cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEECCCCcEEEccccc
Confidence 9999999999999986432 5689999999999999999999998 999999999999999999999999999
Q ss_pred chhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHHHhcCC
Q 005045 547 AKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVSMALP 625 (717)
Q Consensus 547 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 625 (717)
+....... .......++..|+|||.+.+ .++.++|||||||++|+|++|..||.......... .
T Consensus 146 ~~~~~~~~-------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~--~------ 210 (256)
T cd06612 146 SGQLTDTM-------AKRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIF--M------ 210 (256)
T ss_pred chhcccCc-------cccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhh--h------
Confidence 88652211 11222447889999999755 47899999999999999999999997542221100 0
Q ss_pred hhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHH
Q 005045 626 DHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVN 700 (717)
Q Consensus 626 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~ 700 (717)
+.....+. ...+..++..+.+++.+||+.+|++|||+.||++
T Consensus 211 --~~~~~~~~-------------------------------~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~ 252 (256)
T cd06612 211 --IPNKPPPT-------------------------------LSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQ 252 (256)
T ss_pred --hccCCCCC-------------------------------CCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhc
Confidence 00000000 0011223556889999999999999999999986
No 207
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=1.2e-34 Score=293.62 Aligned_cols=256 Identities=24% Similarity=0.459 Sum_probs=199.0
Q ss_pred cccccccccccccCcccccceEEEEeCCCchhhhHHhHhhhhhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCce
Q 005045 385 SKSTDNFSKENLIGTGSFGSVYKGTLGDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDF 464 (717)
Q Consensus 385 ~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 464 (717)
....++|++.++||+|++|.||+|....+..+++|.+.... .....+.+|+++++.++|+||+++.+.+. . ..
T Consensus 2 ~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~-~~ 74 (260)
T cd05073 2 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-----K-EP 74 (260)
T ss_pred cccccceeEEeEecCccceEEEEEEecCCccEEEEecCCCh-hHHHHHHHHHHHHHhcCCCCcceEEEEEc-----C-CC
Confidence 34567899999999999999999997777889999876433 23467888999999999999999988853 2 46
Q ss_pred EEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeee
Q 005045 465 KALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDF 544 (717)
Q Consensus 465 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Df 544 (717)
.+++|||+++++|.+++..... ...++..++.++.|++.|+.|||+. +++||||+|+||+++.++.+||+||
T Consensus 75 ~~~v~e~~~~~~L~~~~~~~~~-----~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~ 146 (260)
T cd05073 75 IYIITEFMAKGSLLDFLKSDEG-----SKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADF 146 (260)
T ss_pred eEEEEEeCCCCcHHHHHHhCCc-----cccCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCC
Confidence 8999999999999999975421 4578889999999999999999997 9999999999999999999999999
Q ss_pred ccchhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHh-CCCCCCCCCCCchhhhHHHHh
Q 005045 545 GLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFT-GKRPTGDMFKDDFSIHMFVSM 622 (717)
Q Consensus 545 g~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~ 622 (717)
|.+....... ........++..|+|||++.+ .++.++|+|||||++|++++ |..||....... .......
T Consensus 147 ~~~~~~~~~~------~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~--~~~~~~~ 218 (260)
T cd05073 147 GLARVIEDNE------YTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPE--VIRALER 218 (260)
T ss_pred cceeeccCCC------cccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHH--HHHHHhC
Confidence 9987542111 111122335677999999654 47889999999999999999 999986532211 1111100
Q ss_pred cCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHHHH
Q 005045 623 ALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVNNL 702 (717)
Q Consensus 623 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~~l 702 (717)
. .... .....+..+.+++.+|++.+|++||++.++.+.|
T Consensus 219 ~------------~~~~-----------------------------~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L 257 (260)
T cd05073 219 G------------YRMP-----------------------------RPENCPEELYNIMMRCWKNRPEERPTFEYIQSVL 257 (260)
T ss_pred C------------CCCC-----------------------------CcccCCHHHHHHHHHHcccCcccCcCHHHHHHHH
Confidence 0 0000 0112255688999999999999999999999998
Q ss_pred HH
Q 005045 703 KT 704 (717)
Q Consensus 703 ~~ 704 (717)
+.
T Consensus 258 ~~ 259 (260)
T cd05073 258 DD 259 (260)
T ss_pred hc
Confidence 75
No 208
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=1.6e-34 Score=293.73 Aligned_cols=254 Identities=23% Similarity=0.395 Sum_probs=196.0
Q ss_pred ccccccccCcccccceEEEEeCCCchhhhHHhHhhh------hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCc
Q 005045 390 NFSKENLIGTGSFGSVYKGTLGDGTIVAIKVLKLQQ------QGALKSFIDECNALKSTRHRNILRVITACSSVDLEGND 463 (717)
Q Consensus 390 ~y~~~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~------~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~ 463 (717)
+|++.+.||+|+||.||+|...+++.+|+|.+.... ......+.+|++++++++|+||+++++.+. +.+
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~ 75 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCL-----DDN 75 (265)
T ss_pred CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEee-----cCC
Confidence 588999999999999999998788999999876331 233466889999999999999999999953 446
Q ss_pred eEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEee
Q 005045 464 FKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGD 543 (717)
Q Consensus 464 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~D 543 (717)
..++||||+++++|.+++.+. ..+++..+..++.|++.|++|||+. +++|+||+|+||+++.++.++|+|
T Consensus 76 ~~~lv~e~~~~~~L~~~l~~~-------~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~d 145 (265)
T cd06631 76 TISIFMEFVPGGSISSILNRF-------GPLPEPVFCKYTKQILDGVAYLHNN---CVVHRDIKGNNVMLMPNGIIKLID 145 (265)
T ss_pred eEEEEEecCCCCcHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHhEEECCCCeEEecc
Confidence 899999999999999999754 4578899999999999999999998 999999999999999999999999
Q ss_pred eccchhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHHHh
Q 005045 544 FGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVSM 622 (717)
Q Consensus 544 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~ 622 (717)
||.+........... .........++..|+|||.+.+ .++.++|||||||++|+|++|..||.......... ....
T Consensus 146 fg~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~--~~~~ 222 (265)
T cd06631 146 FGCARRLAWVGLHGT-HSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMF--YIGA 222 (265)
T ss_pred chhhHhhhhcccccc-ccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHH--Hhhh
Confidence 999876522111111 1111223458889999999765 47899999999999999999999996532111100 0000
Q ss_pred cCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHH
Q 005045 623 ALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVN 700 (717)
Q Consensus 623 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~ 700 (717)
.....+.. +..++..+.+++.+||+.+|++||++.|+++
T Consensus 223 ------~~~~~~~~---------------------------------~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 261 (265)
T cd06631 223 ------HRGLMPRL---------------------------------PDSFSAAAIDFVTSCLTRDQHERPSALQLLR 261 (265)
T ss_pred ------ccCCCCCC---------------------------------CCCCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 00000001 1112556789999999999999999999875
No 209
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=1e-34 Score=298.88 Aligned_cols=266 Identities=23% Similarity=0.389 Sum_probs=198.1
Q ss_pred cccccccccccccCcccccceEEEEeC------CCchhhhHHhHhhh-hhHHHHHHHHHHHHhcCCCCceeEEEEeeccc
Q 005045 385 SKSTDNFSKENLIGTGSFGSVYKGTLG------DGTIVAIKVLKLQQ-QGALKSFIDECNALKSTRHRNILRVITACSSV 457 (717)
Q Consensus 385 ~~~~~~y~~~~~ig~g~~g~v~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~ 457 (717)
....++|++.++||+|++|.||+|..+ .+..||+|.+.... ......+.+|+.+++.++||||+++++.+.
T Consensus 2 ~~~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-- 79 (288)
T cd05061 2 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVS-- 79 (288)
T ss_pred cccHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEc--
Confidence 445789999999999999999998743 24578999876432 233456788999999999999999999853
Q ss_pred cCCCCceEEEEEecCCCCChhhhccCCCCCc---ccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeC
Q 005045 458 DLEGNDFKALVFEFMSNGNLDQWLHPSPAEH---YQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLD 534 (717)
Q Consensus 458 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~---~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~ 534 (717)
.....++||||+++++|.+++....... ......++..+..++.|++.|++|||+. +++||||||+||+++
T Consensus 80 ---~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dikp~nili~ 153 (288)
T cd05061 80 ---KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVA 153 (288)
T ss_pred ---CCCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCCChheEEEc
Confidence 3457899999999999999996532111 0123457788899999999999999997 999999999999999
Q ss_pred CCCceEEeeeccchhcccccCCCCCCcceeecccccccccCCCccC-CCCCcccchhhHHHHHHHHHh-CCCCCCCCCCC
Q 005045 535 KDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMN-GQVSILGDIYSYGILLLEMFT-GKRPTGDMFKD 612 (717)
Q Consensus 535 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~ 612 (717)
.++.++|+|||.++....... ........++..|+|||.+. +.++.++|||||||++|||++ |..||.....+
T Consensus 154 ~~~~~~L~Dfg~~~~~~~~~~-----~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~ 228 (288)
T cd05061 154 HDFTVKIGDFGMTRDIYETDY-----YRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE 228 (288)
T ss_pred CCCcEEECcCCcccccccccc-----ccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHH
Confidence 999999999999875421111 11111123466799999965 458999999999999999999 78888653221
Q ss_pred chhhhHHHHhcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCC
Q 005045 613 DFSIHMFVSMALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRER 692 (717)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~R 692 (717)
+ ... .+.+..... .+..++..+.+++.+|++.+|++|
T Consensus 229 ~--~~~-----------~~~~~~~~~------------------------------~~~~~~~~~~~li~~~l~~~p~~R 265 (288)
T cd05061 229 Q--VLK-----------FVMDGGYLD------------------------------QPDNCPERVTDLMRMCWQFNPKMR 265 (288)
T ss_pred H--HHH-----------HHHcCCCCC------------------------------CCCCCCHHHHHHHHHHcCCChhHC
Confidence 1 000 001110000 011225578899999999999999
Q ss_pred CCHHHHHHHHHHHH
Q 005045 693 IAMNVVVNNLKTIR 706 (717)
Q Consensus 693 ps~~eil~~l~~i~ 706 (717)
||+.|+++.+....
T Consensus 266 ps~~~ll~~l~~~~ 279 (288)
T cd05061 266 PTFLEIVNLLKDDL 279 (288)
T ss_pred cCHHHHHHHHHhhc
Confidence 99999998887653
No 210
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=5.8e-35 Score=302.67 Aligned_cols=273 Identities=22% Similarity=0.315 Sum_probs=196.7
Q ss_pred ccccccccccCcccccceEEEEeC-CCchhhhHHhHhhh-hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceE
Q 005045 388 TDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQ-QGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFK 465 (717)
Q Consensus 388 ~~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~ 465 (717)
.++|++.++||.|++|.||+|.++ +++.||+|.+.... ......+.+|+.+++.++||||+++++++ ...+..
T Consensus 5 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~-----~~~~~~ 79 (301)
T cd07873 5 LETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDII-----HTEKSL 79 (301)
T ss_pred ccceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEE-----ecCCeE
Confidence 468999999999999999999965 78889999886442 23345677899999999999999999995 345689
Q ss_pred EEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeec
Q 005045 466 ALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFG 545 (717)
Q Consensus 466 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg 545 (717)
++||||++ ++|.+++.... ..+++..+..++.||+.||+|||+. +++||||||+||+++.++.++|+|||
T Consensus 80 ~lv~e~~~-~~l~~~l~~~~------~~~~~~~~~~~~~qi~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~dfg 149 (301)
T cd07873 80 TLVFEYLD-KDLKQYLDDCG------NSINMHNVKLFLFQLLRGLNYCHRR---KVLHRDLKPQNLLINERGELKLADFG 149 (301)
T ss_pred EEEEeccc-cCHHHHHHhcC------CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHHHEEECCCCcEEECcCc
Confidence 99999996 68988886542 4578999999999999999999998 99999999999999999999999999
Q ss_pred cchhcccccCCCCCCcceeecccccccccCCCccCC--CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHHHhc
Q 005045 546 LAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG--QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVSMA 623 (717)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~ 623 (717)
.+...... ........+++.|+|||++.+ .++.++|||||||++|+|++|..||......+ ........
T Consensus 150 ~~~~~~~~-------~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~--~~~~~~~~ 220 (301)
T cd07873 150 LARAKSIP-------TKTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEE--QLHFIFRI 220 (301)
T ss_pred chhccCCC-------CCcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHHH
Confidence 98754211 111122346889999999654 37889999999999999999999997653221 11111111
Q ss_pred CC----hhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHH
Q 005045 624 LP----DHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVV 699 (717)
Q Consensus 624 ~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil 699 (717)
+. ..+..+.+......... .....+.. ....+..+..+.+++.+|++.+|.+|||++|++
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~---------------~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil 284 (301)
T cd07873 221 LGTPTEETWPGILSNEEFKSYNY-PKYRADCL---------------HNHAPRLDSDGAELLSKLLQFEGRKRISAEEAM 284 (301)
T ss_pred cCCCChhhchhhhcccccccccc-CccccccH---------------HhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHh
Confidence 11 11111111100000000 00000000 001122355678999999999999999999998
Q ss_pred H
Q 005045 700 N 700 (717)
Q Consensus 700 ~ 700 (717)
+
T Consensus 285 ~ 285 (301)
T cd07873 285 K 285 (301)
T ss_pred c
Confidence 6
No 211
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=4e-35 Score=312.07 Aligned_cols=202 Identities=27% Similarity=0.282 Sum_probs=167.0
Q ss_pred cccccccccccCcccccceEEEEeC-CCchhhhHHhHhh--hhhHHHHHHHHHHHHhcCCCCceeEEEEeecccc-CCCC
Q 005045 387 STDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQ--QQGALKSFIDECNALKSTRHRNILRVITACSSVD-LEGN 462 (717)
Q Consensus 387 ~~~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~-~~~~ 462 (717)
..++|++.+.||+|+||.||.|.+. .++.||+|++... .......+.+|+.+++.++||||+++++.+.... ....
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~ 101 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 101 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence 4679999999999999999999965 7888999988643 2334567788999999999999999998754322 2333
Q ss_pred ceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEe
Q 005045 463 DFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVG 542 (717)
Q Consensus 463 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~ 542 (717)
...|+||||++ +++.+++. ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 102 ~~~~lv~e~~~-~~l~~~~~---------~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~ 168 (364)
T cd07875 102 QDVYIVMELMD-ANLCQVIQ---------MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKIL 168 (364)
T ss_pred CeEEEEEeCCC-CCHHHHHH---------hcCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEECCCCcEEEE
Confidence 46899999996 57777764 3478888999999999999999997 99999999999999999999999
Q ss_pred eeccchhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHhCCCCCCCC
Q 005045 543 DFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRPTGDM 609 (717)
Q Consensus 543 Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~ 609 (717)
|||.+..... ........++..|+|||++.+ .++.++|||||||++|+|++|+.||...
T Consensus 169 DfG~a~~~~~--------~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~ 228 (364)
T cd07875 169 DFGLARTAGT--------SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGT 228 (364)
T ss_pred eCCCccccCC--------CCcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCC
Confidence 9999975411 111233568999999999765 4899999999999999999999999764
No 212
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=6.4e-35 Score=301.44 Aligned_cols=253 Identities=23% Similarity=0.311 Sum_probs=198.6
Q ss_pred ccccccccccccccCcccccceEEEEe-CCCchhhhHHhHhhhhhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCC
Q 005045 384 ISKSTDNFSKENLIGTGSFGSVYKGTL-GDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRVITACSSVDLEGN 462 (717)
Q Consensus 384 ~~~~~~~y~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~ 462 (717)
......+|++.+.||+|++|.||+|.. .+++.||+|.+..........+.+|+.+++.++|+||+++++.+. .+
T Consensus 14 ~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-----~~ 88 (297)
T cd06656 14 VGDPKKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL-----VG 88 (297)
T ss_pred cCChhhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEe-----cC
Confidence 345568999999999999999999995 479999999987655445577889999999999999999999853 45
Q ss_pred ceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEe
Q 005045 463 DFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVG 542 (717)
Q Consensus 463 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~ 542 (717)
+..++||||+++++|.+++.. ..+++..+..++.|++.|+.|||+. +++||||||+||+++.++.++|+
T Consensus 89 ~~~~lv~e~~~~~~L~~~~~~--------~~~~~~~~~~~~~~l~~~L~~LH~~---~i~H~dL~p~Nili~~~~~~~l~ 157 (297)
T cd06656 89 DELWVVMEYLAGGSLTDVVTE--------TCMDEGQIAAVCRECLQALDFLHSN---QVIHRDIKSDNILLGMDGSVKLT 157 (297)
T ss_pred CEEEEeecccCCCCHHHHHHh--------CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEC
Confidence 589999999999999999864 3478889999999999999999997 99999999999999999999999
Q ss_pred eeccchhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHHH
Q 005045 543 DFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVS 621 (717)
Q Consensus 543 Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~ 621 (717)
|||.+...... ........+++.|+|||...+ .++.++|||||||++|++++|..||....+...... ..
T Consensus 158 Dfg~~~~~~~~-------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~-~~- 228 (297)
T cd06656 158 DFGFCAQITPE-------QSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYL-IA- 228 (297)
T ss_pred cCccceEccCC-------ccCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheee-ec-
Confidence 99988754111 111123457889999999655 478999999999999999999999965422111000 00
Q ss_pred hcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHH
Q 005045 622 MALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVN 700 (717)
Q Consensus 622 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~ 700 (717)
....+.. ..+...+..+.+++.+||+.+|++||+++||++
T Consensus 229 --------~~~~~~~-------------------------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (297)
T cd06656 229 --------TNGTPEL-------------------------------QNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQ 268 (297)
T ss_pred --------cCCCCCC-------------------------------CCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0000000 001122455778999999999999999999987
No 213
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=7.2e-35 Score=299.53 Aligned_cols=273 Identities=22% Similarity=0.361 Sum_probs=203.1
Q ss_pred cccccccccCcccccceEEEEeC-----CCchhhhHHhHhhhhh-HHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCC
Q 005045 389 DNFSKENLIGTGSFGSVYKGTLG-----DGTIVAIKVLKLQQQG-ALKSFIDECNALKSTRHRNILRVITACSSVDLEGN 462 (717)
Q Consensus 389 ~~y~~~~~ig~g~~g~v~~~~~~-----~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~ 462 (717)
..|++.+.||+|+||.||.|++. +++.+|+|++...... ....+.+|+++++.+.|+||+++++++.. ...
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~---~~~ 80 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEK---PGG 80 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeec---CCC
Confidence 56888999999999999999843 4778999998755443 46789999999999999999999988643 224
Q ss_pred ceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEe
Q 005045 463 DFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVG 542 (717)
Q Consensus 463 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~ 542 (717)
...++||||+++++|.+++.... ..+++..+..++.|++.||+|||+. +++||||+|+||+++.++.++|+
T Consensus 81 ~~~~lv~e~~~~~~l~~~l~~~~------~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~ 151 (284)
T cd05038 81 RSLRLIMEYLPSGSLRDYLQRHR------DQINLKRLLLFSSQICKGMDYLGSQ---RYIHRDLAARNILVESEDLVKIS 151 (284)
T ss_pred CceEEEEecCCCCCHHHHHHhCc------cccCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEc
Confidence 57899999999999999997543 3589999999999999999999997 99999999999999999999999
Q ss_pred eeccchhcccccCCCCCCcceeecccccccccCCCccC-CCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHHH
Q 005045 543 DFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMN-GQVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVS 621 (717)
Q Consensus 543 Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~ 621 (717)
|||.+....... ..........++..|+|||... ..++.++|||||||++|+|++|..|+......... ...
T Consensus 152 dfg~~~~~~~~~----~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~---~~~ 224 (284)
T cd05038 152 DFGLAKVLPEDK----DYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLR---MIG 224 (284)
T ss_pred ccccccccccCC----cceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhcc---ccc
Confidence 999998762111 1111111233556799999954 45899999999999999999999998653221100 000
Q ss_pred hcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHHH
Q 005045 622 MALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVNN 701 (717)
Q Consensus 622 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~~ 701 (717)
... .........+.+. ... ....+..++.++.+++.+||+.+|++||||.||+++
T Consensus 225 ~~~---------------~~~~~~~~~~~~~---~~~-------~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~ 279 (284)
T cd05038 225 IAQ---------------GQMIVTRLLELLK---EGE-------RLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILI 279 (284)
T ss_pred ccc---------------ccccHHHHHHHHH---cCC-------cCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHH
Confidence 000 0000111111110 000 011223456778999999999999999999999999
Q ss_pred HHHH
Q 005045 702 LKTI 705 (717)
Q Consensus 702 l~~i 705 (717)
|+++
T Consensus 280 l~~i 283 (284)
T cd05038 280 VDRL 283 (284)
T ss_pred Hhhc
Confidence 9886
No 214
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=1.8e-34 Score=292.88 Aligned_cols=253 Identities=24% Similarity=0.337 Sum_probs=199.1
Q ss_pred ccccccccccCcccccceEEEEeC-CCchhhhHHhHhhhhhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceEE
Q 005045 388 TDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFKA 466 (717)
Q Consensus 388 ~~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~ 466 (717)
.++|++.+.+|.|++|.||.|... +++.+++|++........+.+.+|++++++++||||+++++.+ ......+
T Consensus 2 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~-----~~~~~~~ 76 (262)
T cd06613 2 QEDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSY-----LRRDKLW 76 (262)
T ss_pred ccceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEE-----EeCCEEE
Confidence 468999999999999999999965 6788999998866555667889999999999999999999985 3455899
Q ss_pred EEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeecc
Q 005045 467 LVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGL 546 (717)
Q Consensus 467 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~ 546 (717)
++|||+++++|.+++.... ..+++..+..++.|++.|++|||+. +++||||+|+||+++.++.++|+|||.
T Consensus 77 l~~e~~~~~~l~~~~~~~~------~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~ 147 (262)
T cd06613 77 IVMEYCGGGSLQDIYQVTR------GPLSELQIAYVCRETLKGLAYLHET---GKIHRDIKGANILLTEDGDVKLADFGV 147 (262)
T ss_pred EEEeCCCCCcHHHHHHhhc------cCCCHHHHHHHHHHHHHHHHHHHhC---CceecCCChhhEEECCCCCEEECcccc
Confidence 9999999999999887542 4588999999999999999999997 999999999999999999999999999
Q ss_pred chhcccccCCCCCCcceeecccccccccCCCccCC----CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHHHh
Q 005045 547 AKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG----QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVSM 622 (717)
Q Consensus 547 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~----~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~ 622 (717)
+....... .......++..|+|||.+.+ .++.++|||||||++|+|++|..||....+..... .....
T Consensus 148 ~~~~~~~~-------~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~-~~~~~ 219 (262)
T cd06613 148 SAQLTATI-------AKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALF-LISKS 219 (262)
T ss_pred chhhhhhh-------hccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHH-HHHhc
Confidence 87652211 11223457888999999643 47889999999999999999999997543221110 00000
Q ss_pred cCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHH
Q 005045 623 ALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVN 700 (717)
Q Consensus 623 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~ 700 (717)
. ..+.. .......+..+.+++.+||+.+|++|||+.+|+.
T Consensus 220 ~--------~~~~~------------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 259 (262)
T cd06613 220 N--------FPPPK------------------------------LKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQ 259 (262)
T ss_pred c--------CCCcc------------------------------ccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 0 00000 0011223566889999999999999999999975
No 215
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=2.4e-34 Score=292.90 Aligned_cols=256 Identities=23% Similarity=0.351 Sum_probs=195.1
Q ss_pred cccccccccccccccCcccccceEEEEeC-CCchhhhHHhHhhhhhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCC
Q 005045 383 DISKSTDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRVITACSSVDLEG 461 (717)
Q Consensus 383 ~~~~~~~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~ 461 (717)
|+....+.......||+|+||.||+|.+. +++.|++|.+........+.+.+|+.+++.++|+||+++++++. .
T Consensus 2 ~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-----~ 76 (268)
T cd06624 2 EYEYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDS-----E 76 (268)
T ss_pred CcccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeec-----c
Confidence 34455666666678999999999999954 67889999887655555678899999999999999999999853 3
Q ss_pred CceEEEEEecCCCCChhhhccCCCCCccccccc--CHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCC-CCc
Q 005045 462 NDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKL--SVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDK-DMT 538 (717)
Q Consensus 462 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~--~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~-~~~ 538 (717)
++..++||||+++++|.+++.... ..+ ++..+..++.||+.|++|||+. +++||||||+||+++. ++.
T Consensus 77 ~~~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~h~dl~p~nil~~~~~~~ 147 (268)
T cd06624 77 NGFFKIFMEQVPGGSLSALLRSKW------GPLKDNEQTIIFYTKQILEGLKYLHDN---QIVHRDIKGDNVLVNTYSGV 147 (268)
T ss_pred CCEEEEEEecCCCCCHHHHHHHhc------ccCCCcHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCe
Confidence 458999999999999999987532 223 7888899999999999999997 9999999999999986 679
Q ss_pred eEEeeeccchhcccccCCCCCCcceeecccccccccCCCccCC---CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchh
Q 005045 539 AHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG---QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFS 615 (717)
Q Consensus 539 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~---~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~ 615 (717)
++|+|||.+....... .......++..|+|||.+.+ .++.++||||||+++|+|++|..||.........
T Consensus 148 ~~l~dfg~~~~~~~~~-------~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~ 220 (268)
T cd06624 148 VKISDFGTSKRLAGIN-------PCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAA 220 (268)
T ss_pred EEEecchhheecccCC-------CccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhh
Confidence 9999999987542111 11122357889999999643 2688999999999999999999998654221111
Q ss_pred hhHHHHhcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCH
Q 005045 616 IHMFVSMALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAM 695 (717)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~ 695 (717)
........ ..+. .+..++..+.+++.+||+.+|++|||+
T Consensus 221 ~~~~~~~~--------~~~~---------------------------------~~~~~~~~~~~li~~~l~~~p~~Rpt~ 259 (268)
T cd06624 221 MFKVGMFK--------IHPE---------------------------------IPESLSAEAKNFILRCFEPDPDKRASA 259 (268)
T ss_pred Hhhhhhhc--------cCCC---------------------------------CCcccCHHHHHHHHHHcCCCchhCCCH
Confidence 10000000 0000 111235567889999999999999999
Q ss_pred HHHHH
Q 005045 696 NVVVN 700 (717)
Q Consensus 696 ~eil~ 700 (717)
.|+++
T Consensus 260 ~~ll~ 264 (268)
T cd06624 260 HDLLQ 264 (268)
T ss_pred HHHHh
Confidence 99986
No 216
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=1.1e-34 Score=298.28 Aligned_cols=276 Identities=24% Similarity=0.306 Sum_probs=194.8
Q ss_pred ccccccccCcccccceEEEEeC-CCchhhhHHhHhhh--hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceEE
Q 005045 390 NFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQ--QGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFKA 466 (717)
Q Consensus 390 ~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~ 466 (717)
+|++.+.||+|++|.||+|..+ +++.||+|.+.... ......+.+|+.++++++||||+++++.+. .++..+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~ 75 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLM-----QESRLY 75 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEe-----eCCeEE
Confidence 5889999999999999999965 78899999886442 223466788999999999999999999953 456899
Q ss_pred EEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeecc
Q 005045 467 LVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGL 546 (717)
Q Consensus 467 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~ 546 (717)
+||||++ +++.+++..... ...+++..+..++.||+.||+|||+. +++||||+|+||+++.++.++|+|||.
T Consensus 76 ~v~e~~~-~~l~~~~~~~~~----~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~ 147 (285)
T cd07861 76 LIFEFLS-MDLKKYLDSLPK----GQYMDAELVKSYLYQILQGILFCHSR---RVLHRDLKPQNLLIDNKGVIKLADFGL 147 (285)
T ss_pred EEEecCC-CCHHHHHhcCCC----CCcCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEEcCCCcEEECcccc
Confidence 9999996 688888764321 14689999999999999999999997 999999999999999999999999999
Q ss_pred chhcccccCCCCCCcceeecccccccccCCCccCC--CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHHHhcC
Q 005045 547 AKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG--QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVSMAL 624 (717)
Q Consensus 547 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~ 624 (717)
+...... ........++..|+|||++.+ .++.++|||||||++|+|++|..||......+.... .... .
T Consensus 148 ~~~~~~~-------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~-~~~~-~ 218 (285)
T cd07861 148 ARAFGIP-------VRVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFR-IFRI-L 218 (285)
T ss_pred eeecCCC-------cccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH-HHHH-h
Confidence 8754111 111122346788999999654 368899999999999999999999975432211111 0000 0
Q ss_pred ChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHH
Q 005045 625 PDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVN 700 (717)
Q Consensus 625 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~ 700 (717)
.......+. . .....+.... ...............++.++.+++.+||+.+|++|||++||+.
T Consensus 219 ~~~~~~~~~-~--------~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~ 281 (285)
T cd07861 219 GTPTEDVWP-G--------VTSLPDYKNT----FPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALN 281 (285)
T ss_pred CCCChhhhh-c--------chhhHHHHhh----ccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence 000000000 0 0000000000 0000000000011223567789999999999999999999975
No 217
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=2.9e-34 Score=292.40 Aligned_cols=255 Identities=23% Similarity=0.389 Sum_probs=185.2
Q ss_pred cccCcccccceEEEEeC---CCchhhhHHhHhhh-hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceEEEEEe
Q 005045 395 NLIGTGSFGSVYKGTLG---DGTIVAIKVLKLQQ-QGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFKALVFE 470 (717)
Q Consensus 395 ~~ig~g~~g~v~~~~~~---~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~lv~e 470 (717)
+.||+|+||.||+|... ++..+|+|.+.... ......+.+|+.++++++||||+++++.+. +....++|||
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~~~~~lv~e 75 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCT-----EVTPYLLVME 75 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEc-----CCCCcEEEEE
Confidence 36899999999999854 34568888876443 233457888999999999999999999854 3457899999
Q ss_pred cCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeeccchhc
Q 005045 471 FMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFL 550 (717)
Q Consensus 471 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~ 550 (717)
|+++++|.+++...... .....++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+|||.+...
T Consensus 76 ~~~~g~L~~~l~~~~~~--~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~ 150 (269)
T cd05087 76 FCPLGDLKGYLRSCRKA--ELMTPDPTTLQRMACEIALGLLHLHKN---NFIHSDLALRNCLLTADLTVKIGDYGLSHNK 150 (269)
T ss_pred CCCCCcHHHHHHHhhhc--ccccccHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEECCccccccc
Confidence 99999999998643211 113456778889999999999999997 9999999999999999999999999998643
Q ss_pred ccccCCCCCCcceeecccccccccCCCccCC--------CCCcccchhhHHHHHHHHHh-CCCCCCCCCCCchhhhHHHH
Q 005045 551 FEISDNPSKNQTVSIGLKGSIGYIPPEHMNG--------QVSILGDIYSYGILLLEMFT-GKRPTGDMFKDDFSIHMFVS 621 (717)
Q Consensus 551 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~ 621 (717)
... ..........++..|+|||++.+ .++.++|||||||++|||++ |..||......+. ......
T Consensus 151 ~~~-----~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~-~~~~~~ 224 (269)
T cd05087 151 YKE-----DYYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQV-LTYTVR 224 (269)
T ss_pred cCc-----ceeecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHH-HHHHhh
Confidence 111 01111122446788999999653 24789999999999999996 9999975433221 110000
Q ss_pred hcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHHH
Q 005045 622 MALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVNN 701 (717)
Q Consensus 622 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~~ 701 (717)
.......++.... .++..+.+++.+|+ .+|++|||++||++.
T Consensus 225 ----~~~~~~~~~~~~~---------------------------------~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~ 266 (269)
T cd05087 225 ----EQQLKLPKPRLKL---------------------------------PLSDRWYEVMQFCW-LQPEQRPSAEEVHLL 266 (269)
T ss_pred ----cccCCCCCCccCC---------------------------------CCChHHHHHHHHHh-cCcccCCCHHHHHHH
Confidence 0000111111110 11345677899998 589999999999988
Q ss_pred HH
Q 005045 702 LK 703 (717)
Q Consensus 702 l~ 703 (717)
|+
T Consensus 267 l~ 268 (269)
T cd05087 267 LS 268 (269)
T ss_pred hc
Confidence 74
No 218
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=5.8e-35 Score=308.47 Aligned_cols=201 Identities=26% Similarity=0.336 Sum_probs=166.7
Q ss_pred cccccccccccCcccccceEEEEeC-CCchhhhHHhHhhh--hhHHHHHHHHHHHHhcCCCCceeEEEEeecccc-CCCC
Q 005045 387 STDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQ--QGALKSFIDECNALKSTRHRNILRVITACSSVD-LEGN 462 (717)
Q Consensus 387 ~~~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~-~~~~ 462 (717)
..++|++.+.||+|+||.||+|.+. +++.||+|.+.... ......+.+|++++++++||||+++++++.... ....
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07878 13 VPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENF 92 (343)
T ss_pred hhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhccccccccc
Confidence 3578999999999999999999954 78889999886432 223456778999999999999999998754321 1223
Q ss_pred ceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEe
Q 005045 463 DFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVG 542 (717)
Q Consensus 463 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~ 542 (717)
...+++++++ +++|.+++.. ..+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 93 ~~~~~~~~~~-~~~l~~~~~~--------~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrdikp~Nil~~~~~~~kl~ 160 (343)
T cd07878 93 NEVYLVTNLM-GADLNNIVKC--------QKLSDEHVQFLIYQLLRGLKYIHSA---GIIHRDLKPSNVAVNEDCELRIL 160 (343)
T ss_pred CcEEEEeecC-CCCHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecccCChhhEEECCCCCEEEc
Confidence 4579999988 7899888753 3589999999999999999999998 99999999999999999999999
Q ss_pred eeccchhcccccCCCCCCcceeecccccccccCCCccCC--CCCcccchhhHHHHHHHHHhCCCCCCCC
Q 005045 543 DFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG--QVSILGDIYSYGILLLEMFTGKRPTGDM 609 (717)
Q Consensus 543 Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~sDvwslG~vl~elltg~~p~~~~ 609 (717)
|||.+..... ......++..|+|||++.+ .++.++|||||||++|+|++|+.||...
T Consensus 161 Dfg~~~~~~~----------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 219 (343)
T cd07878 161 DFGLARQADD----------EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGN 219 (343)
T ss_pred CCccceecCC----------CcCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCC
Confidence 9999876411 1123468899999999755 4789999999999999999999999654
No 219
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=6.7e-35 Score=308.85 Aligned_cols=190 Identities=24% Similarity=0.377 Sum_probs=158.1
Q ss_pred ccccccccccCcccccceEEEEeC-CCchhhhHHhHhhhhhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceEE
Q 005045 388 TDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFKA 466 (717)
Q Consensus 388 ~~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~ 466 (717)
..+|++.+.||+|+||.||+|... +++.||+|+... .....|+.++++++|+||+++++.+. .....+
T Consensus 65 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~------~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~~~~~ 133 (357)
T PHA03209 65 SLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQK------GTTLIEAMLLQNVNHPSVIRMKDTLV-----SGAITC 133 (357)
T ss_pred hcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCc------cccHHHHHHHHhCCCCCCcChhheEE-----eCCeeE
Confidence 457999999999999999999965 677899997432 22346899999999999999999854 345889
Q ss_pred EEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeecc
Q 005045 467 LVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGL 546 (717)
Q Consensus 467 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~ 546 (717)
+|||++. +++.+++.... ..+++..++.++.||+.||.|||+. +|+||||||+||+++.++.+||+|||.
T Consensus 134 lv~e~~~-~~l~~~l~~~~------~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~ 203 (357)
T PHA03209 134 MVLPHYS-SDLYTYLTKRS------RPLPIDQALIIEKQILEGLRYLHAQ---RIIHRDVKTENIFINDVDQVCIGDLGA 203 (357)
T ss_pred EEEEccC-CcHHHHHHhcc------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEecCcc
Confidence 9999995 68888876432 5689999999999999999999998 999999999999999999999999999
Q ss_pred chhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHhCCCCC
Q 005045 547 AKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRPT 606 (717)
Q Consensus 547 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~elltg~~p~ 606 (717)
+.... .........||..|+|||++.+ .++.++|||||||++|||+++..|+
T Consensus 204 a~~~~--------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~ 256 (357)
T PHA03209 204 AQFPV--------VAPAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTI 256 (357)
T ss_pred ccccc--------cCcccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCcc
Confidence 87431 1111234568999999999655 5899999999999999999965554
No 220
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=8.8e-35 Score=303.82 Aligned_cols=198 Identities=26% Similarity=0.371 Sum_probs=164.2
Q ss_pred ccccccccCcccccceEEEEeC-CCchhhhHHhHhhh---hhHHHHHHHHHHHHhcCC-CCceeEEEEeeccccCCCCce
Q 005045 390 NFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQ---QGALKSFIDECNALKSTR-HRNILRVITACSSVDLEGNDF 464 (717)
Q Consensus 390 ~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~-h~ni~~~~~~~~~~~~~~~~~ 464 (717)
+|+..+.||+|+||.||+|..+ +|+.||+|++.... ....+.+..|..+++.+. |++|+++.+++ ...+.
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~-----~~~~~ 75 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCF-----QTVDR 75 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEE-----ecCCE
Confidence 4778899999999999999965 78999999886442 233466778888988885 56677777773 44568
Q ss_pred EEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeee
Q 005045 465 KALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDF 544 (717)
Q Consensus 465 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Df 544 (717)
.|+||||+++++|.+++... ..+++..+..++.||+.||+|||+. +++||||||+||+++.++.+||+||
T Consensus 76 ~~lv~Ey~~~g~L~~~i~~~-------~~l~~~~~~~i~~qi~~al~~lH~~---~ivHrDikp~Nill~~~~~ikL~Df 145 (323)
T cd05615 76 LYFVMEYVNGGDLMYHIQQV-------GKFKEPQAVFYAAEISVGLFFLHRR---GIIYRDLKLDNVMLDSEGHIKIADF 145 (323)
T ss_pred EEEEEcCCCCCcHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEecc
Confidence 99999999999999998754 5689999999999999999999997 9999999999999999999999999
Q ss_pred ccchhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHhCCCCCCCC
Q 005045 545 GLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRPTGDM 609 (717)
Q Consensus 545 g~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~ 609 (717)
|.+..... .........|++.|+|||++.+ .++.++||||+||++|+|++|..||...
T Consensus 146 g~~~~~~~-------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~ 204 (323)
T cd05615 146 GMCKEHMV-------DGVTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGE 204 (323)
T ss_pred ccccccCC-------CCccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCC
Confidence 99875311 1111223458999999999765 4799999999999999999999999754
No 221
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=2e-34 Score=291.54 Aligned_cols=250 Identities=24% Similarity=0.333 Sum_probs=194.6
Q ss_pred ccccccccCcccccceEEEEeC-CCchhhhHHhHhhh--hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceEE
Q 005045 390 NFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQ--QGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFKA 466 (717)
Q Consensus 390 ~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~ 466 (717)
+|++.+.+|.|++|.||.+..+ +++.||+|.+.... ....+.+..|++++++++|+|++++.+.+. ......+
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~----~~~~~~~ 76 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWE----GEDGLLY 76 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeec----CCCCEEE
Confidence 5899999999999999999965 67889999886432 334567889999999999999999988742 2344689
Q ss_pred EEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeecc
Q 005045 467 LVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGL 546 (717)
Q Consensus 467 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~ 546 (717)
++|||+++++|.+++..... ..+++.++..++.+++.|++++|+. +++||||+|+||+++.++.++|+|||.
T Consensus 77 lv~e~~~~~~l~~~l~~~~~-----~~l~~~~~~~~~~~l~~~l~~lH~~---~i~H~di~p~nil~~~~~~~~l~df~~ 148 (257)
T cd08223 77 IVMGFCEGGDLYHKLKEQKG-----KLLPENQVVEWFVQIAMALQYLHEK---HILHRDLKTQNVFLTRTNIIKVGDLGI 148 (257)
T ss_pred EEecccCCCcHHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCchhEEEecCCcEEEecccc
Confidence 99999999999999875321 4589999999999999999999998 999999999999999999999999999
Q ss_pred chhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHHHhcCC
Q 005045 547 AKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVSMALP 625 (717)
Q Consensus 547 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 625 (717)
+...... ........+++.|+|||+..+ .++.++||||+||++|+|++|+.||........ ......
T Consensus 149 ~~~~~~~-------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~-~~~~~~---- 216 (257)
T cd08223 149 ARVLENQ-------CDMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSL-VYRIIE---- 216 (257)
T ss_pred eEEeccc-------CCccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHH-HHHHHh----
Confidence 8765211 111223457889999999654 478999999999999999999999864321110 000000
Q ss_pred hhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHHH
Q 005045 626 DHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVNN 701 (717)
Q Consensus 626 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~~ 701 (717)
...+. .+...+..+.+++.+|++.+|++|||+.|+++.
T Consensus 217 --------~~~~~------------------------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 254 (257)
T cd08223 217 --------GKLPP------------------------------MPKDYSPELGELIATMLSKRPEKRPSVKSILRQ 254 (257)
T ss_pred --------cCCCC------------------------------CccccCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 00000 011224567899999999999999999999863
No 222
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=3.2e-34 Score=305.75 Aligned_cols=268 Identities=22% Similarity=0.344 Sum_probs=202.1
Q ss_pred ccccccccccccccCcccccceEEEEeC------CCchhhhHHhHhhh-hhHHHHHHHHHHHHhcCC-CCceeEEEEeec
Q 005045 384 ISKSTDNFSKENLIGTGSFGSVYKGTLG------DGTIVAIKVLKLQQ-QGALKSFIDECNALKSTR-HRNILRVITACS 455 (717)
Q Consensus 384 ~~~~~~~y~~~~~ig~g~~g~v~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~-h~ni~~~~~~~~ 455 (717)
+....++|.+.++||+|+||.||+|.+. .++.||+|++.... ....+.+..|++++.++. ||||+++++.+.
T Consensus 32 ~~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~ 111 (401)
T cd05107 32 WEMPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACT 111 (401)
T ss_pred ceecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEc
Confidence 5566778999999999999999999853 34679999997542 233457889999999997 999999999864
Q ss_pred cccCCCCceEEEEEecCCCCChhhhccCCCCCc-----------------------------------------------
Q 005045 456 SVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEH----------------------------------------------- 488 (717)
Q Consensus 456 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~----------------------------------------------- 488 (717)
. .+..++||||+++|+|.++++......
T Consensus 112 ~-----~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (401)
T cd05107 112 K-----GGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDES 186 (401)
T ss_pred c-----CCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccc
Confidence 3 457899999999999999986532100
Q ss_pred --------------------------------------------ccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeec
Q 005045 489 --------------------------------------------YQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHC 524 (717)
Q Consensus 489 --------------------------------------------~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~ 524 (717)
.....+++..+.+++.||+.|++|||+. +++||
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHr 263 (401)
T cd05107 187 ADYVPMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASK---NCVHR 263 (401)
T ss_pred cCccchhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC---CcCcc
Confidence 0113467888999999999999999997 99999
Q ss_pred CCCCCCEEeCCCCceEEeeeccchhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHh-C
Q 005045 525 DLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFT-G 602 (717)
Q Consensus 525 dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~ellt-g 602 (717)
||||+||+++.++.+||+|||.+........ ........++..|+|||.+.+ .++.++|||||||++|||++ |
T Consensus 264 dlkp~NiLl~~~~~~kL~DfGla~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g 338 (401)
T cd05107 264 DLAARNVLICEGKLVKICDFGLARDIMRDSN-----YISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLG 338 (401)
T ss_pred cCCcceEEEeCCCEEEEEecCcceecccccc-----cccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcC
Confidence 9999999999999999999999875421111 011122346788999999654 57899999999999999998 8
Q ss_pred CCCCCCCCCCchhhhHHHHhcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhh
Q 005045 603 KRPTGDMFKDDFSIHMFVSMALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGL 682 (717)
Q Consensus 603 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 682 (717)
..||......+. ..... ....... .+..++..+.+++.
T Consensus 339 ~~P~~~~~~~~~-~~~~~------------~~~~~~~-----------------------------~p~~~~~~l~~li~ 376 (401)
T cd05107 339 GTPYPELPMNEQ-FYNAI------------KRGYRMA-----------------------------KPAHASDEIYEIMQ 376 (401)
T ss_pred CCCCCCCCchHH-HHHHH------------HcCCCCC-----------------------------CCCCCCHHHHHHHH
Confidence 999865422211 10000 0000000 01122556889999
Q ss_pred ccCCCCcCCCCCHHHHHHHHHHHH
Q 005045 683 MCSTTSPRERIAMNVVVNNLKTIR 706 (717)
Q Consensus 683 ~cl~~~p~~Rps~~eil~~l~~i~ 706 (717)
+||..+|++||+++||++.|+.+.
T Consensus 377 ~cl~~~P~~RPs~~ell~~L~~~~ 400 (401)
T cd05107 377 KCWEEKFEIRPDFSQLVHLVGDLL 400 (401)
T ss_pred HHcCCChhHCcCHHHHHHHHHHHh
Confidence 999999999999999999998863
No 223
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.8e-36 Score=302.74 Aligned_cols=249 Identities=24% Similarity=0.331 Sum_probs=200.2
Q ss_pred cccccccccccccCcccccceEEEEeC-CCchhhhHHhHhhhh---hHHHHHHHHHHHHhcCCCCceeEEEEeeccccCC
Q 005045 385 SKSTDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQQ---GALKSFIDECNALKSTRHRNILRVITACSSVDLE 460 (717)
Q Consensus 385 ~~~~~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~ 460 (717)
.++...|..++.||.|+||.||-|++. +.+.||||.+..... +.-..+..|++.+++++|||++.+-+||-
T Consensus 22 ~DPEklf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyL----- 96 (948)
T KOG0577|consen 22 DDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYL----- 96 (948)
T ss_pred CCHHHHHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceee-----
Confidence 345668899999999999999999954 889999999975432 22366789999999999999999998853
Q ss_pred CCceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceE
Q 005045 461 GNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAH 540 (717)
Q Consensus 461 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~k 540 (717)
.....|+|||||- |+-.|++.-.. +.+.+.++..|..+.+.||+|||+. +.+|||||+.||++++.|.||
T Consensus 97 re~TaWLVMEYCl-GSAsDlleVhk------KplqEvEIAAi~~gaL~gLaYLHS~---~~IHRDiKAGNILLse~g~VK 166 (948)
T KOG0577|consen 97 REHTAWLVMEYCL-GSASDLLEVHK------KPLQEVEIAAITHGALQGLAYLHSH---NRIHRDIKAGNILLSEPGLVK 166 (948)
T ss_pred ccchHHHHHHHHh-ccHHHHHHHHh------ccchHHHHHHHHHHHHHHHHHHHHh---hHHhhhccccceEecCCCeee
Confidence 3347899999994 68888876554 6788999999999999999999998 999999999999999999999
Q ss_pred EeeeccchhcccccCCCCCCcceeecccccccccCCCcc----CCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhh
Q 005045 541 VGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHM----NGQVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSI 616 (717)
Q Consensus 541 l~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~----~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~ 616 (717)
|+|||.|..+. ....++|||.|||||++ .|+|+-++||||||++-.||--.++|+..+..-. .
T Consensus 167 LaDFGSAsi~~-----------PAnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMS--A 233 (948)
T KOG0577|consen 167 LADFGSASIMA-----------PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS--A 233 (948)
T ss_pred eccccchhhcC-----------chhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHH--H
Confidence 99999998762 12247799999999994 5789999999999999999999999976552211 1
Q ss_pred hHHHHhcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHH
Q 005045 617 HMFVSMALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMN 696 (717)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ 696 (717)
.+++..+ -.|.+. ..+-+..|..|+..|++.-|.+|||..
T Consensus 234 LYHIAQN--------esPtLq--------------------------------s~eWS~~F~~Fvd~CLqKipqeRptse 273 (948)
T KOG0577|consen 234 LYHIAQN--------ESPTLQ--------------------------------SNEWSDYFRNFVDSCLQKIPQERPTSE 273 (948)
T ss_pred HHHHHhc--------CCCCCC--------------------------------CchhHHHHHHHHHHHHhhCcccCCcHH
Confidence 1111111 111111 122366788999999999999999999
Q ss_pred HHHHH
Q 005045 697 VVVNN 701 (717)
Q Consensus 697 eil~~ 701 (717)
+++..
T Consensus 274 ~ll~H 278 (948)
T KOG0577|consen 274 ELLKH 278 (948)
T ss_pred HHhhc
Confidence 98753
No 224
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-35 Score=302.18 Aligned_cols=252 Identities=23% Similarity=0.331 Sum_probs=203.6
Q ss_pred cccccccccccCcccccceEEEEeC-CCchhhhHHhHhhhhhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceE
Q 005045 387 STDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFK 465 (717)
Q Consensus 387 ~~~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~ 465 (717)
+.+-|.|+..+|.|+||.||+|+.+ ++-..|.|++.....+....+.-|++||..++||+|+++++.|+. .+.+
T Consensus 30 P~d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~-----enkL 104 (1187)
T KOG0579|consen 30 PRDHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYF-----ENKL 104 (1187)
T ss_pred HHHHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhc-----cCce
Confidence 4567899999999999999999976 445567788887777788999999999999999999999998543 3489
Q ss_pred EEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeec
Q 005045 466 ALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFG 545 (717)
Q Consensus 466 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg 545 (717)
||+.|||+||-++.++-... ..+++.++.-++.|++.||.|||++ .|+|||||+.||+++.+|.++|+|||
T Consensus 105 wiliEFC~GGAVDaimlEL~------r~LtE~QIqvvc~q~ldALn~LHs~---~iIHRDLKAGNiL~TldGdirLADFG 175 (1187)
T KOG0579|consen 105 WILIEFCGGGAVDAIMLELG------RVLTEDQIQVVCYQVLDALNWLHSQ---NIIHRDLKAGNILLTLDGDIRLADFG 175 (1187)
T ss_pred EEEEeecCCchHhHHHHHhc------cccchHHHHHHHHHHHHHHHHHhhc---chhhhhccccceEEEecCcEeeeccc
Confidence 99999999999998876543 6789999999999999999999998 99999999999999999999999999
Q ss_pred cchhcccccCCCCCCcceeecccccccccCCCccC------CCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHH
Q 005045 546 LAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMN------GQVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMF 619 (717)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~------~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~ 619 (717)
.+... .........++||+.|||||+.. ..|++++||||||+++.||..+.+|.....+-...+ .
T Consensus 176 VSAKn-------~~t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVll--K 246 (1187)
T KOG0579|consen 176 VSAKN-------KSTRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLL--K 246 (1187)
T ss_pred ccccc-------hhHHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHH--H
Confidence 98754 22334456789999999999952 248999999999999999999999987653321100 0
Q ss_pred HHhcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHH
Q 005045 620 VSMALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVV 699 (717)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil 699 (717)
+ ..--.|.+. .++ .-...|.+|+.+||..+|+.||++.+++
T Consensus 247 i--------aKSePPTLl--------------------------qPS-----~Ws~~F~DfLk~cL~Knp~~Rp~aaqll 287 (1187)
T KOG0579|consen 247 I--------AKSEPPTLL--------------------------QPS-----HWSRSFSDFLKRCLVKNPRNRPPAAQLL 287 (1187)
T ss_pred H--------hhcCCCccc--------------------------Ccc-----hhhhHHHHHHHHHHhcCCccCCCHHHHh
Confidence 0 000011111 111 1266788999999999999999999998
Q ss_pred H
Q 005045 700 N 700 (717)
Q Consensus 700 ~ 700 (717)
+
T Consensus 288 ~ 288 (1187)
T KOG0579|consen 288 K 288 (1187)
T ss_pred h
Confidence 5
No 225
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=2.3e-34 Score=293.61 Aligned_cols=238 Identities=24% Similarity=0.375 Sum_probs=182.0
Q ss_pred ccCcccccceEEEEeC-------------------------CCchhhhHHhHhhhhhHHHHHHHHHHHHhcCCCCceeEE
Q 005045 396 LIGTGSFGSVYKGTLG-------------------------DGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRV 450 (717)
Q Consensus 396 ~ig~g~~g~v~~~~~~-------------------------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~ 450 (717)
+||+|+||.||+|... ....|++|.+..........+.+|+.+++.++||||+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 6999999999998732 113478888876555555678889999999999999999
Q ss_pred EEeeccccCCCCceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCC
Q 005045 451 ITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSN 530 (717)
Q Consensus 451 ~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~N 530 (717)
++++.. ....++||||+++++|.+++.... ..+++..+..++.||++||+|||+. +++||||||+|
T Consensus 82 ~~~~~~-----~~~~~lv~ey~~~g~L~~~l~~~~------~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~N 147 (274)
T cd05076 82 HGVCVR-----GSENIMVEEFVEHGPLDVCLRKEK------GRVPVAWKITVAQQLASALSYLEDK---NLVHGNVCAKN 147 (274)
T ss_pred EEEEEe-----CCceEEEEecCCCCcHHHHHHhcC------CCCCHHHHHHHHHHHHHHHHHHHcC---CccCCCCCccc
Confidence 999643 447899999999999999986532 5688999999999999999999997 99999999999
Q ss_pred EEeCCCC-------ceEEeeeccchhcccccCCCCCCcceeecccccccccCCCccCC--CCCcccchhhHHHHHHHHH-
Q 005045 531 VLLDKDM-------TAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG--QVSILGDIYSYGILLLEMF- 600 (717)
Q Consensus 531 Ill~~~~-------~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~sDvwslG~vl~ell- 600 (717)
|+++..+ .+|++|||.+..... .....++..|+|||.+.+ .++.++|||||||++||++
T Consensus 148 ill~~~~~~~~~~~~~kl~d~g~~~~~~~-----------~~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~ 216 (274)
T cd05076 148 ILLARLGLAEGTSPFIKLSDPGVSFTALS-----------REERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICF 216 (274)
T ss_pred EEEeccCcccCccceeeecCCcccccccc-----------ccccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHh
Confidence 9997644 489999998764311 011246778999998754 4789999999999999995
Q ss_pred hCCCCCCCCCCCchhhhHHHHhcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHH
Q 005045 601 TGKRPTGDMFKDDFSIHMFVSMALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRI 680 (717)
Q Consensus 601 tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 680 (717)
+|..||........ .... ....... +.....+.++
T Consensus 217 ~g~~p~~~~~~~~~--~~~~------------~~~~~~~-------------------------------~~~~~~~~~l 251 (274)
T cd05076 217 DGEVPLKERTPSEK--ERFY------------EKKHRLP-------------------------------EPSCKELATL 251 (274)
T ss_pred CCCCCccccChHHH--HHHH------------HhccCCC-------------------------------CCCChHHHHH
Confidence 69999865432211 0000 0000000 0012357889
Q ss_pred hhccCCCCcCCCCCHHHHHHHHH
Q 005045 681 GLMCSTTSPRERIAMNVVVNNLK 703 (717)
Q Consensus 681 i~~cl~~~p~~Rps~~eil~~l~ 703 (717)
+.+||+.+|++|||+++|++.|+
T Consensus 252 i~~cl~~~p~~Rps~~~il~~L~ 274 (274)
T cd05076 252 ISQCLTYEPTQRPSFRTILRDLT 274 (274)
T ss_pred HHHHcccChhhCcCHHHHHHhhC
Confidence 99999999999999999998763
No 226
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=3.6e-34 Score=296.18 Aligned_cols=268 Identities=23% Similarity=0.370 Sum_probs=197.7
Q ss_pred cccccccccccCcccccceEEEEeCC-----------------CchhhhHHhHhhh-hhHHHHHHHHHHHHhcCCCCcee
Q 005045 387 STDNFSKENLIGTGSFGSVYKGTLGD-----------------GTIVAIKVLKLQQ-QGALKSFIDECNALKSTRHRNIL 448 (717)
Q Consensus 387 ~~~~y~~~~~ig~g~~g~v~~~~~~~-----------------~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~ni~ 448 (717)
..++|++.+.||+|+||.||.|.... +..||+|.+.... ....+.+.+|++++++++||||+
T Consensus 3 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~ 82 (296)
T cd05051 3 PRQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIA 82 (296)
T ss_pred chhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEe
Confidence 34689999999999999999988542 2347888876542 34467788999999999999999
Q ss_pred EEEEeeccccCCCCceEEEEEecCCCCChhhhccCCCCCc----ccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeec
Q 005045 449 RVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEH----YQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHC 524 (717)
Q Consensus 449 ~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~----~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~ 524 (717)
++++++. .+...+++||++++++|.+++....... .....+++..++.++.|++.||+|||+. +++||
T Consensus 83 ~~~~~~~-----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~---~i~H~ 154 (296)
T cd05051 83 RLLGVCT-----VDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESL---NFVHR 154 (296)
T ss_pred EEEEEEe-----cCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHc---Ccccc
Confidence 9999853 3458899999999999999987542100 0113689999999999999999999997 99999
Q ss_pred CCCCCCEEeCCCCceEEeeeccchhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHh--
Q 005045 525 DLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFT-- 601 (717)
Q Consensus 525 dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~ellt-- 601 (717)
||||+||+++.++.++|+|||.+....... .........++..|+|||.+.+ .++.++|||||||++|||++
T Consensus 155 dlkp~Nili~~~~~~~l~dfg~~~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~ 229 (296)
T cd05051 155 DLATRNCLVGKNYTIKIADFGMSRNLYSSD-----YYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLC 229 (296)
T ss_pred ccchhceeecCCCceEEccccceeecccCc-----ceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcC
Confidence 999999999999999999999987542111 1111223446778999999654 68999999999999999998
Q ss_pred CCCCCCCCCCCchhhhHHHHhcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHh
Q 005045 602 GKRPTGDMFKDDFSIHMFVSMALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIG 681 (717)
Q Consensus 602 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 681 (717)
|..||....... ............ +.... ...+..++.++.+++
T Consensus 230 ~~~p~~~~~~~~--~~~~~~~~~~~~-----~~~~~-----------------------------~~~~~~~~~~l~~li 273 (296)
T cd05051 230 REQPYEHLTDQQ--VIENAGHFFRDD-----GRQIY-----------------------------LPRPPNCPKDIYELM 273 (296)
T ss_pred CCCCCCCcChHH--HHHHHHhccccc-----ccccc-----------------------------CCCccCCCHHHHHHH
Confidence 677775432111 111110000000 00000 001112356789999
Q ss_pred hccCCCCcCCCCCHHHHHHHHH
Q 005045 682 LMCSTTSPRERIAMNVVVNNLK 703 (717)
Q Consensus 682 ~~cl~~~p~~Rps~~eil~~l~ 703 (717)
.+|++.+|++|||+.||++.|+
T Consensus 274 ~~cl~~~p~~Rpt~~el~~~L~ 295 (296)
T cd05051 274 LECWRRDEEDRPTFREIHLFLQ 295 (296)
T ss_pred HHHhccChhcCCCHHHHHHHhc
Confidence 9999999999999999998875
No 227
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=8.4e-35 Score=304.11 Aligned_cols=193 Identities=29% Similarity=0.401 Sum_probs=158.2
Q ss_pred cccCcccccceEEEEeC-CCchhhhHHhHhhh---hhHHHHHHHHHH-HHhcCCCCceeEEEEeeccccCCCCceEEEEE
Q 005045 395 NLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQ---QGALKSFIDECN-ALKSTRHRNILRVITACSSVDLEGNDFKALVF 469 (717)
Q Consensus 395 ~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~-~l~~l~h~ni~~~~~~~~~~~~~~~~~~~lv~ 469 (717)
+.||+|+||.||+|++. +++.||+|++.... ......+..|.. +++.++||||+++++.+ .+.+..++||
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~-----~~~~~~~lv~ 75 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSF-----QTAEKLYFVL 75 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEE-----EcCCEEEEEE
Confidence 46899999999999965 78899999886432 223344555544 67889999999999884 4456899999
Q ss_pred ecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeeccchh
Q 005045 470 EFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKF 549 (717)
Q Consensus 470 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~ 549 (717)
||+++++|.+++... ..+++..+..++.||+.||+|||+. +|+||||||+||+++.+|.+||+|||++..
T Consensus 76 e~~~~~~L~~~l~~~-------~~~~~~~~~~~~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~ 145 (321)
T cd05603 76 DYVNGGELFFHLQRE-------RCFLEPRARFYAAEVASAIGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKE 145 (321)
T ss_pred cCCCCCCHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEccCCCCcc
Confidence 999999999888644 5688899999999999999999997 999999999999999999999999999874
Q ss_pred cccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHhCCCCCCCC
Q 005045 550 LFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRPTGDM 609 (717)
Q Consensus 550 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~ 609 (717)
... .........|++.|+|||++.+ .++.++|||||||++|+|++|..||...
T Consensus 146 ~~~-------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 199 (321)
T cd05603 146 GVE-------PEETTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSR 199 (321)
T ss_pred CCC-------CCCccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCC
Confidence 311 1112233568999999999765 4889999999999999999999999653
No 228
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=2.8e-34 Score=289.40 Aligned_cols=247 Identities=28% Similarity=0.465 Sum_probs=191.2
Q ss_pred cccCcccccceEEEEeCCCchhhhHHhHhhhh-hHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceEEEEEecCC
Q 005045 395 NLIGTGSFGSVYKGTLGDGTIVAIKVLKLQQQ-GALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMS 473 (717)
Q Consensus 395 ~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~lv~e~~~ 473 (717)
++||+|++|.||.|.+..++.|++|.+..... .....+..|+++++++.|+||+++++.+. .....++||||++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~~~~v~e~~~ 75 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCV-----QKQPIYIVMELVP 75 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEe-----cCCCeEEEEEcCC
Confidence 47899999999999976699999998875433 24567889999999999999999999853 4458899999999
Q ss_pred CCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeeccchhcccc
Q 005045 474 NGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEI 553 (717)
Q Consensus 474 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~ 553 (717)
+++|.+++.... ..+++..+..++.+++.|++|||++ +++||||+|+||+++.++.++|+|||.+......
T Consensus 76 ~~~l~~~l~~~~------~~~~~~~~~~~~~~~~~~l~~lH~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~ 146 (251)
T cd05041 76 GGSLLTFLRKKK------NRLTVKKLLQMSLDAAAGMEYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSREEEGG 146 (251)
T ss_pred CCcHHHHHHhcC------CCCCHHHHHHHHHHHHHHHHHHHhC---CEehhhcCcceEEEcCCCcEEEeeccccccccCC
Confidence 999999986532 4578899999999999999999998 9999999999999999999999999998754211
Q ss_pred cCCCCCCcceeecccccccccCCCccC-CCCCcccchhhHHHHHHHHHh-CCCCCCCCCCCchhhhHHHHhcCChhhhhh
Q 005045 554 SDNPSKNQTVSIGLKGSIGYIPPEHMN-GQVSILGDIYSYGILLLEMFT-GKRPTGDMFKDDFSIHMFVSMALPDHVMDI 631 (717)
Q Consensus 554 ~~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 631 (717)
. ..........+..|+|||.+. +.++.++|||||||++|+|++ |..||....... .....
T Consensus 147 ~-----~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~--~~~~~----------- 208 (251)
T cd05041 147 I-----YTVSDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQ--TRERI----------- 208 (251)
T ss_pred c-----ceeccccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHH--HHHHH-----------
Confidence 0 001111122356799999965 458999999999999999999 888886543211 11000
Q ss_pred cCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHHHHH
Q 005045 632 LDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVNNLK 703 (717)
Q Consensus 632 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~~l~ 703 (717)
....... .+..++..+.+++.+|++.+|++|||+.|+++.|.
T Consensus 209 -~~~~~~~-----------------------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 209 -ESGYRMP-----------------------------APQLCPEEIYRLMLQCWAYDPENRPSFSEIYNELQ 250 (251)
T ss_pred -hcCCCCC-----------------------------CCccCCHHHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence 0000000 01122556889999999999999999999999875
No 229
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=2.2e-34 Score=289.95 Aligned_cols=246 Identities=29% Similarity=0.438 Sum_probs=190.1
Q ss_pred cccCcccccceEEEEeCCCchhhhHHhHhhh-hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceEEEEEecCC
Q 005045 395 NLIGTGSFGSVYKGTLGDGTIVAIKVLKLQQ-QGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMS 473 (717)
Q Consensus 395 ~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~lv~e~~~ 473 (717)
+.||+|++|.||+|...+++.+|+|.+.... ......+.+|+++++.++||||+++++.+. ..+..++||||++
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~lv~e~~~ 75 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCT-----QRQPIYIVMELVP 75 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEe-----cCCccEEEEECCC
Confidence 3689999999999998788899999876442 233456889999999999999999999864 3447899999999
Q ss_pred CCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeeccchhcccc
Q 005045 474 NGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEI 553 (717)
Q Consensus 474 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~ 553 (717)
+++|.+++.... ..+++..+..++.|++.|+.|+|+. +++||||+|+||+++.++.+||+|||.+......
T Consensus 76 ~~~L~~~~~~~~------~~~~~~~~~~~~~~i~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~ 146 (250)
T cd05085 76 GGDFLSFLRKKK------DELKTKQLVKFALDAAAGMAYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSRQEDDG 146 (250)
T ss_pred CCcHHHHHHhcC------CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccChheEEEcCCCeEEECCCccceecccc
Confidence 999999986542 4578999999999999999999997 9999999999999999999999999998754111
Q ss_pred cCCCCCCcceeecccccccccCCCccC-CCCCcccchhhHHHHHHHHHh-CCCCCCCCCCCchhhhHHHHhcCChhhhhh
Q 005045 554 SDNPSKNQTVSIGLKGSIGYIPPEHMN-GQVSILGDIYSYGILLLEMFT-GKRPTGDMFKDDFSIHMFVSMALPDHVMDI 631 (717)
Q Consensus 554 ~~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 631 (717)
. ........++..|+|||++. +.++.++|||||||++|++++ |..||....... ........
T Consensus 147 ~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~--~~~~~~~~-------- 210 (250)
T cd05085 147 I------YSSSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQ--AREQVEKG-------- 210 (250)
T ss_pred c------cccCCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHH--HHHHHHcC--------
Confidence 1 11111123456799999965 458999999999999999998 999996542211 10000000
Q ss_pred cCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHHHHH
Q 005045 632 LDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVNNLK 703 (717)
Q Consensus 632 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~~l~ 703 (717)
.... .+..++..+.+++.+|++.+|++|||+.|+++.|.
T Consensus 211 ~~~~---------------------------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 211 YRMS---------------------------------CPQKCPDDVYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred CCCC---------------------------------CCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 0000 01112567889999999999999999999998874
No 230
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=4e-35 Score=297.24 Aligned_cols=251 Identities=27% Similarity=0.427 Sum_probs=194.3
Q ss_pred cccccccCcccccceEEEEeC-CCchhhhHHhHhhhhhH--HHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceEEE
Q 005045 391 FSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQQGA--LKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFKAL 467 (717)
Q Consensus 391 y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~~~~--~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~l 467 (717)
|++.++||+|++|.||+++.+ +++.||+|++....... ......|+.++++++||||+++++.+.. ....++
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~-----~~~~~~ 75 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQD-----DNYLYI 75 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEE-----SSEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhccccccccccccccccccc-----cccccc
Confidence 788999999999999999966 67789999998664332 2234569999999999999999999543 568899
Q ss_pred EEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeeccc
Q 005045 468 VFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLA 547 (717)
Q Consensus 468 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~ 547 (717)
|||++++++|.+++... ..+++..+..++.||+.||++||+. +++|+||||+||+++.++.++|+|||.+
T Consensus 76 v~~~~~~~~L~~~l~~~-------~~~~~~~~~~~~~qi~~~L~~Lh~~---~i~H~dikp~NIl~~~~~~~~l~Dfg~~ 145 (260)
T PF00069_consen 76 VMEYCPGGSLQDYLQKN-------KPLSEEEILKIAYQILEALAYLHSK---GIVHRDIKPENILLDENGEVKLIDFGSS 145 (260)
T ss_dssp EEEEETTEBHHHHHHHH-------SSBBHHHHHHHHHHHHHHHHHHHHT---TEEESSBSGGGEEESTTSEEEESSGTTT
T ss_pred ccccccccccccccccc-------ccccccccccccccccccccccccc---cccccccccccccccccccccccccccc
Confidence 99999988999999732 5689999999999999999999998 9999999999999999999999999998
Q ss_pred hhcccccCCCCCCcceeecccccccccCCCccC--CCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHHHhcCC
Q 005045 548 KFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMN--GQVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVSMALP 625 (717)
Q Consensus 548 ~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~--~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 625 (717)
... ...........++..|+|||+.. ..++.++||||+|+++|+|++|..||...... ........
T Consensus 146 ~~~-------~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~--~~~~~~~~--- 213 (260)
T PF00069_consen 146 VKL-------SENNENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSD--DQLEIIEK--- 213 (260)
T ss_dssp EES-------TSTTSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHH--HHHHHHHH---
T ss_pred ccc-------cccccccccccccccccccccccccccccccccccccccccccccccccccccccch--hhhhhhhh---
Confidence 753 11222334456888999999976 45899999999999999999999999754100 00000000
Q ss_pred hhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHH
Q 005045 626 DHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVN 700 (717)
Q Consensus 626 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~ 700 (717)
........ ... ........+.+++.+||+.+|++|||+.|+++
T Consensus 214 ---------------------------~~~~~~~~--~~~---~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~ 256 (260)
T PF00069_consen 214 ---------------------------ILKRPLPS--SSQ---QSREKSEELRDLIKKMLSKDPEQRPSAEELLK 256 (260)
T ss_dssp ---------------------------HHHTHHHH--HTT---SHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHT
T ss_pred ---------------------------cccccccc--ccc---ccchhHHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 00000000 000 00011367899999999999999999999985
No 231
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=2e-34 Score=294.67 Aligned_cols=261 Identities=25% Similarity=0.326 Sum_probs=201.3
Q ss_pred cccccccccccccCcccccceEEEEeC-CCchhhhHHhHhhhhhHHHHHHHHHHHHhcC-CCCceeEEEEeeccccC-CC
Q 005045 385 SKSTDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQQGALKSFIDECNALKST-RHRNILRVITACSSVDL-EG 461 (717)
Q Consensus 385 ~~~~~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~~~-~~ 461 (717)
..+.++|++.+.+|+|++|.||.|..+ +++.+++|++..... ....+.+|+.+++++ .|+||+++++.+..... ..
T Consensus 2 ~~~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~ 80 (275)
T cd06608 2 PDPTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED-EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGN 80 (275)
T ss_pred CCchhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch-hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCc
Confidence 457799999999999999999999975 678899998875543 346788999999999 79999999999765432 34
Q ss_pred CceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEE
Q 005045 462 NDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHV 541 (717)
Q Consensus 462 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl 541 (717)
....++||||+++++|.+++..... ....+++..+..++.|++.|+.|||+. +++||||+|+||+++.++.++|
T Consensus 81 ~~~~~lv~e~~~~~~L~~~~~~~~~---~~~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~~l~p~ni~~~~~~~~~l 154 (275)
T cd06608 81 DDQLWLVMELCGGGSVTDLVKGLRK---KGKRLKEEWIAYILRETLRGLAYLHEN---KVIHRDIKGQNILLTKNAEVKL 154 (275)
T ss_pred ceEEEEEEEcCCCCcHHHHHHHHhh---cCCCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEEccCCeEEE
Confidence 5678999999999999998864321 115689999999999999999999997 9999999999999999999999
Q ss_pred eeeccchhcccccCCCCCCcceeecccccccccCCCccCC------CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchh
Q 005045 542 GDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG------QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFS 615 (717)
Q Consensus 542 ~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~------~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~ 615 (717)
+|||.+...... ........++..|+|||++.+ .++.++|||||||++|+|++|..||........
T Consensus 155 ~d~~~~~~~~~~-------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~- 226 (275)
T cd06608 155 VDFGVSAQLDST-------LGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRA- 226 (275)
T ss_pred CCCccceecccc-------hhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHH-
Confidence 999998754211 111223458889999998642 367899999999999999999999964322110
Q ss_pred hhHHHHhcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCH
Q 005045 616 IHMFVSMALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAM 695 (717)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~ 695 (717)
.. ++...... ....+.+++..+.+++.+||..+|++|||+
T Consensus 227 ~~------------~~~~~~~~----------------------------~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~ 266 (275)
T cd06608 227 LF------------KIPRNPPP----------------------------TLKSPENWSKKFNDFISECLIKNYEQRPFM 266 (275)
T ss_pred HH------------HhhccCCC----------------------------CCCchhhcCHHHHHHHHHHhhcChhhCcCH
Confidence 00 00000000 000112235678899999999999999999
Q ss_pred HHHHH
Q 005045 696 NVVVN 700 (717)
Q Consensus 696 ~eil~ 700 (717)
.|+++
T Consensus 267 ~~ll~ 271 (275)
T cd06608 267 EELLE 271 (275)
T ss_pred HHHhc
Confidence 99986
No 232
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=1.9e-34 Score=302.32 Aligned_cols=201 Identities=27% Similarity=0.377 Sum_probs=168.7
Q ss_pred cccccccccCcccccceEEEEeC-CCchhhhHHhHhh---hhhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCce
Q 005045 389 DNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQ---QQGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDF 464 (717)
Q Consensus 389 ~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 464 (717)
++|++.+.||+|+||.||.++.+ +++.||+|++... .....+.+.+|+.+++.++|++|+++++++ ..++.
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~-----~~~~~ 75 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAF-----QDENN 75 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEE-----ecCCe
Confidence 47999999999999999999965 7899999998643 233456688999999999999999999984 45568
Q ss_pred EEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeee
Q 005045 465 KALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDF 544 (717)
Q Consensus 465 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Df 544 (717)
.|+||||+++++|.+++.... ..+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 76 ~~lv~e~~~g~~L~~~l~~~~------~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Df 146 (331)
T cd05597 76 LYLVMDYYVGGDLLTLLSKFE------DRLPEDMARFYLAEMVLAIDSVHQL---GYVHRDIKPDNVLLDKNGHIRLADF 146 (331)
T ss_pred EEEEEecCCCCcHHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHhC---CeEECCCCHHHEEECCCCCEEEEEC
Confidence 999999999999999986532 4689999999999999999999998 9999999999999999999999999
Q ss_pred ccchhcccccCCCCCCcceeecccccccccCCCccC------CCCCcccchhhHHHHHHHHHhCCCCCCCC
Q 005045 545 GLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMN------GQVSILGDIYSYGILLLEMFTGKRPTGDM 609 (717)
Q Consensus 545 g~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~------~~~~~~sDvwslG~vl~elltg~~p~~~~ 609 (717)
|.+....... ........|++.|+|||++. +.++.++||||+||++|+|++|..||...
T Consensus 147 g~~~~~~~~~------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~ 211 (331)
T cd05597 147 GSCLRLLADG------TVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAE 211 (331)
T ss_pred CceeecCCCC------CccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCC
Confidence 9987542111 11112245899999999965 24688999999999999999999999653
No 233
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=1.9e-34 Score=296.08 Aligned_cols=263 Identities=24% Similarity=0.323 Sum_probs=202.3
Q ss_pred CcccccccccccccccccCcccccceEEEEeC-CCchhhhHHhHhhhhhHHHHHHHHHHHHhcC-CCCceeEEEEeeccc
Q 005045 380 SYSDISKSTDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQQGALKSFIDECNALKST-RHRNILRVITACSSV 457 (717)
Q Consensus 380 s~~~~~~~~~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~ 457 (717)
++.+...+.+.|++.+.+|.|+||.||+|.+. +++.+|+|+...... ....+..|+.+++++ +|+||+++++.+...
T Consensus 7 ~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~ 85 (282)
T cd06636 7 DLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTED-EEEEIKLEINMLKKYSHHRNIATYYGAFIKK 85 (282)
T ss_pred hhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecChH-HHHHHHHHHHHHHHhcCCCcEEEEeeehhcc
Confidence 56666678899999999999999999999964 788999998765432 335678899999998 799999999987543
Q ss_pred cC-CCCceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCC
Q 005045 458 DL-EGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKD 536 (717)
Q Consensus 458 ~~-~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~ 536 (717)
.. ......+++|||+++++|.+++..... ..+++..+..++.||+.|++|||+. +++||||+|+||+++.+
T Consensus 86 ~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~-----~~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dl~~~nili~~~ 157 (282)
T cd06636 86 SPPGHDDQLWLVMEFCGAGSVTDLVKNTKG-----NALKEDWIAYICREILRGLAHLHAH---KVIHRDIKGQNVLLTEN 157 (282)
T ss_pred cccCCCCEEEEEEEeCCCCcHHHHHHHccC-----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCC
Confidence 21 235678999999999999999875421 4578888999999999999999998 99999999999999999
Q ss_pred CceEEeeeccchhcccccCCCCCCcceeecccccccccCCCccC------CCCCcccchhhHHHHHHHHHhCCCCCCCCC
Q 005045 537 MTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMN------GQVSILGDIYSYGILLLEMFTGKRPTGDMF 610 (717)
Q Consensus 537 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~------~~~~~~sDvwslG~vl~elltg~~p~~~~~ 610 (717)
+.++|+|||.+...... ........++..|+|||.+. ..++.++|||||||++|+|++|..||....
T Consensus 158 ~~~~l~dfg~~~~~~~~-------~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~ 230 (282)
T cd06636 158 AEVKLVDFGVSAQLDRT-------VGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMH 230 (282)
T ss_pred CCEEEeeCcchhhhhcc-------ccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccC
Confidence 99999999998754211 11122345888999999864 247889999999999999999999996542
Q ss_pred CCchhhhHHHHhcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcC
Q 005045 611 KDDFSIHMFVSMALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPR 690 (717)
Q Consensus 611 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~ 690 (717)
+..... . ......+.. ....++..+.+++.+||+.+|.
T Consensus 231 ~~~~~~--~--------~~~~~~~~~--------------------------------~~~~~~~~~~~li~~cl~~~p~ 268 (282)
T cd06636 231 PMRALF--L--------IPRNPPPKL--------------------------------KSKKWSKKFIDFIEGCLVKNYL 268 (282)
T ss_pred HHhhhh--h--------HhhCCCCCC--------------------------------cccccCHHHHHHHHHHhCCChh
Confidence 211000 0 000000000 1112356789999999999999
Q ss_pred CCCCHHHHHH
Q 005045 691 ERIAMNVVVN 700 (717)
Q Consensus 691 ~Rps~~eil~ 700 (717)
+|||+.||++
T Consensus 269 ~Rp~~~ell~ 278 (282)
T cd06636 269 SRPSTEQLLK 278 (282)
T ss_pred hCcCHHHHhc
Confidence 9999999975
No 234
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=2.6e-34 Score=295.06 Aligned_cols=251 Identities=25% Similarity=0.348 Sum_probs=192.6
Q ss_pred ccccccccCcccccceEEEEeC-CCchhhhHHhHhhh---hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceE
Q 005045 390 NFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQ---QGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFK 465 (717)
Q Consensus 390 ~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~ 465 (717)
.|++.+.||+|+||.||.|.+. +++.||+|.+.... ......+..|+.++++++|++|+.+++.+ ...+..
T Consensus 1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~-----~~~~~~ 75 (285)
T cd05630 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAY-----ETKDAL 75 (285)
T ss_pred CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEE-----ecCCEE
Confidence 3778899999999999999965 78999999876432 22335567899999999999999999884 345589
Q ss_pred EEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeec
Q 005045 466 ALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFG 545 (717)
Q Consensus 466 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg 545 (717)
++||||+++++|.+++..... ..+++..+..++.|++.|+.|||+. +|+||||||+||+++.++.++|+|||
T Consensus 76 ~lv~e~~~g~~L~~~l~~~~~-----~~l~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nil~~~~~~~~l~Dfg 147 (285)
T cd05630 76 CLVLTLMNGGDLKFHIYHMGE-----AGFEEGRAVFYAAEICCGLEDLHQE---RIVYRDLKPENILLDDHGHIRISDLG 147 (285)
T ss_pred EEEEEecCCCcHHHHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeecc
Confidence 999999999999998854321 4589999999999999999999997 99999999999999999999999999
Q ss_pred cchhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHHHhcC
Q 005045 546 LAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVSMAL 624 (717)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~ 624 (717)
.+...... .......|+..|+|||++.+ .++.++||||+||++|+|++|..||........ .. ..
T Consensus 148 ~~~~~~~~--------~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~-~~-~~---- 213 (285)
T cd05630 148 LAVHVPEG--------QTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIK-RE-EV---- 213 (285)
T ss_pred ceeecCCC--------ccccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccch-HH-HH----
Confidence 98654111 11123468999999999654 589999999999999999999999975322110 00 00
Q ss_pred ChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCC-----HHHHH
Q 005045 625 PDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIA-----MNVVV 699 (717)
Q Consensus 625 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps-----~~eil 699 (717)
....+ .... ..+..++..+.+++.+||+.+|++||| ++|++
T Consensus 214 ----~~~~~-------------------~~~~-----------~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~ 259 (285)
T cd05630 214 ----ERLVK-------------------EVQE-----------EYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVK 259 (285)
T ss_pred ----Hhhhh-------------------hhhh-----------hcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHH
Confidence 00000 0000 001122455788999999999999999 88998
Q ss_pred HH
Q 005045 700 NN 701 (717)
Q Consensus 700 ~~ 701 (717)
+.
T Consensus 260 ~h 261 (285)
T cd05630 260 EH 261 (285)
T ss_pred cC
Confidence 73
No 235
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=100.00 E-value=2.6e-38 Score=307.91 Aligned_cols=342 Identities=28% Similarity=0.444 Sum_probs=246.6
Q ss_pred eecEEEcCCCcCcCCCCcCCcCCCCCCEEECCCCcccccCCcCCCCCCCCCEEEccCccccccCCccccCCCCCCEEecc
Q 005045 11 MTQDLNLTYNYLSGKIPTNLSHCTELRSFEASVNDFVGQIPNQLSSLTKLEIIGLGGSNLTGNVPAWIGNFSSLKALSLA 90 (717)
Q Consensus 11 ~~~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~ 90 (717)
.+..|+.++|.++ .+|+.++.+-.|..|+..+|+++ ..|+.+..+.+|..|++.+|+++. .|...-+++.|++||..
T Consensus 115 ~l~~l~~s~n~~~-el~~~i~~~~~l~dl~~~~N~i~-slp~~~~~~~~l~~l~~~~n~l~~-l~~~~i~m~~L~~ld~~ 191 (565)
T KOG0472|consen 115 SLVKLDCSSNELK-ELPDSIGRLLDLEDLDATNNQIS-SLPEDMVNLSKLSKLDLEGNKLKA-LPENHIAMKRLKHLDCN 191 (565)
T ss_pred hhhhhhcccccee-ecCchHHHHhhhhhhhccccccc-cCchHHHHHHHHHHhhccccchhh-CCHHHHHHHHHHhcccc
Confidence 4455555555555 45555555555666666666655 555556666666666666666663 33333336667777777
Q ss_pred CCcCcccCChhhhccCCCCeEeccCCCCCCCCCccccCCCCccEEEcccCcccccCCcccccCCCCcceeeccccccccc
Q 005045 91 WNNLRGSIPNELGQLSGLGFFTLYGNFISGIIPSSIYNISSIYYFSVTQNQLHGQLPTDVGLTLPNLKIFAGAVNYFTGS 170 (717)
Q Consensus 91 ~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~l~~~~~~~l~~L~~L~l~~n~l~~~ 170 (717)
+|-++ .+|..++.+.+|..|+|.+|+|. ..| .|.+++.|++|++..|.|. .+|......+++|.+|||.+|++. .
T Consensus 192 ~N~L~-tlP~~lg~l~~L~~LyL~~Nki~-~lP-ef~gcs~L~Elh~g~N~i~-~lpae~~~~L~~l~vLDLRdNklk-e 266 (565)
T KOG0472|consen 192 SNLLE-TLPPELGGLESLELLYLRRNKIR-FLP-EFPGCSLLKELHVGENQIE-MLPAEHLKHLNSLLVLDLRDNKLK-E 266 (565)
T ss_pred hhhhh-cCChhhcchhhhHHHHhhhcccc-cCC-CCCccHHHHHHHhcccHHH-hhHHHHhcccccceeeeccccccc-c
Confidence 77776 77777888888888888888888 455 7888888888888888887 888888888999999999999998 6
Q ss_pred CCccCCCCCCCCEEeccCccccccCCCCccCCCCCCeeeccccccCCccc-----Cchhhhhhh----------------
Q 005045 171 IPVSLSNASNLQVLDFAENGLTGTIPGNFGSLKDLVRLNFDQNELGSREI-----GDLNFLKFL---------------- 229 (717)
Q Consensus 171 ~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~-----~~~~~~~~~---------------- 229 (717)
.|+.++-+.+|++||+|+|.|+ ..|..++++ .|+.|.+.+|.++.+.- |.-...+.+
T Consensus 267 ~Pde~clLrsL~rLDlSNN~is-~Lp~sLgnl-hL~~L~leGNPlrTiRr~ii~~gT~~vLKyLrs~~~~dglS~se~~~ 344 (565)
T KOG0472|consen 267 VPDEICLLRSLERLDLSNNDIS-SLPYSLGNL-HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKDDGLSQSEGGT 344 (565)
T ss_pred CchHHHHhhhhhhhcccCCccc-cCCcccccc-eeeehhhcCCchHHHHHHHHcccHHHHHHHHHHhhccCCCCCCcccc
Confidence 7888888999999999999999 677788888 88888888888764321 000000000
Q ss_pred -------------------------------------c---cCCCCCEEEeecCcccCcCch------------------
Q 005045 230 -------------------------------------A---NCTSLEVLGLARNSFGGEMPI------------------ 251 (717)
Q Consensus 230 -------------------------------------~---~l~~L~~L~L~~N~l~~~~p~------------------ 251 (717)
. .-.-....+++.|++. ++|.
T Consensus 345 e~~~t~~~~~~~~~~~~i~tkiL~~s~~qlt~VPdEVfea~~~~~Vt~VnfskNqL~-elPk~L~~lkelvT~l~lsnn~ 423 (565)
T KOG0472|consen 345 ETAMTLPSESFPDIYAIITTKILDVSDKQLTLVPDEVFEAAKSEIVTSVNFSKNQLC-ELPKRLVELKELVTDLVLSNNK 423 (565)
T ss_pred cccCCCCCCcccchhhhhhhhhhcccccccccCCHHHHHHhhhcceEEEecccchHh-hhhhhhHHHHHHHHHHHhhcCc
Confidence 0 0011445555555554 4444
Q ss_pred ------hhhhccccccEEecCCCccCCCCCccccCCCCCCEEEccCCcCccccchhhhcCCCCCeEEcccCcCCCCCCcc
Q 005045 252 ------SIANLSTHLRRLTMGENLMHGNIPVGIGNLVNLNLLGLEGNNLSGSVPEVIGRLNKLEGLGLNVNKFSGLIPSS 325 (717)
Q Consensus 252 ------~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 325 (717)
.+..+ ++|..|+|++|.+. .+|..+..+..|+.|+++.|++. ..|.++..+..|+.+-.++|++..+.+..
T Consensus 424 isfv~~~l~~l-~kLt~L~L~NN~Ln-~LP~e~~~lv~Lq~LnlS~NrFr-~lP~~~y~lq~lEtllas~nqi~~vd~~~ 500 (565)
T KOG0472|consen 424 ISFVPLELSQL-QKLTFLDLSNNLLN-DLPEEMGSLVRLQTLNLSFNRFR-MLPECLYELQTLETLLASNNQIGSVDPSG 500 (565)
T ss_pred cccchHHHHhh-hcceeeecccchhh-hcchhhhhhhhhheecccccccc-cchHHHhhHHHHHHHHhccccccccChHH
Confidence 34444 46777777777776 56777777777777777777777 67777777777777777778888777778
Q ss_pred cccccccceeecccccccccCCcCccCcCCCceEEeecccCC
Q 005045 326 LGNLTILTRLWMEENRLEGSIPPSLGNCQKLLVLNLSSNDLN 367 (717)
Q Consensus 326 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 367 (717)
+.+|.+|.+|||.+|.+. .+|..+++|++|++|++.||||.
T Consensus 501 l~nm~nL~tLDL~nNdlq-~IPp~LgnmtnL~hLeL~gNpfr 541 (565)
T KOG0472|consen 501 LKNMRNLTTLDLQNNDLQ-QIPPILGNMTNLRHLELDGNPFR 541 (565)
T ss_pred hhhhhhcceeccCCCchh-hCChhhccccceeEEEecCCccC
Confidence 999999999999999999 99999999999999999999997
No 236
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=2.6e-34 Score=292.52 Aligned_cols=252 Identities=26% Similarity=0.405 Sum_probs=194.4
Q ss_pred ccccccccCcccccceEEEEeC-CCchhhhHHhHhhh---------hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccC
Q 005045 390 NFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQ---------QGALKSFIDECNALKSTRHRNILRVITACSSVDL 459 (717)
Q Consensus 390 ~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~---------~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~ 459 (717)
+|.+...||+|++|.||.|... +++.+|+|.+.... ....+.+.+|++++++++||||+++++.+.
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~---- 76 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSL---- 76 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEE----
Confidence 5788899999999999999964 68889999775321 123467889999999999999999999853
Q ss_pred CCCceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCce
Q 005045 460 EGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTA 539 (717)
Q Consensus 460 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~ 539 (717)
..+..++||||+++++|.+++... ..+++..+..++.|++.|++|||+. +++||||+|+||+++.++.+
T Consensus 77 -~~~~~~lv~e~~~~~~L~~~l~~~-------~~l~~~~~~~~~~~l~~~l~~lH~~---~ivH~di~p~nil~~~~~~~ 145 (267)
T cd06628 77 -DADHLNIFLEYVPGGSVAALLNNY-------GAFEETLVRNFVRQILKGLNYLHNR---GIIHRDIKGANILVDNKGGI 145 (267)
T ss_pred -eCCccEEEEEecCCCCHHHHHHhc-------cCccHHHHHHHHHHHHHHHHHHHhc---CcccccCCHHHEEEcCCCCE
Confidence 445889999999999999999754 4578899999999999999999997 99999999999999999999
Q ss_pred EEeeeccchhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhH
Q 005045 540 HVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHM 618 (717)
Q Consensus 540 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~ 618 (717)
+|+|||.+........... .........++..|+|||.+.+ .++.++||||+||++|+|++|..||....... ...
T Consensus 146 ~l~dfg~~~~~~~~~~~~~-~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~-~~~- 222 (267)
T cd06628 146 KISDFGISKKLEANSLSTK-TNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQ-AIF- 222 (267)
T ss_pred EecccCCCcccccccccCC-ccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHH-HHH-
Confidence 9999999886632111100 1111123457889999999655 57889999999999999999999997532111 000
Q ss_pred HHHhcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHH
Q 005045 619 FVSMALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVV 698 (717)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ei 698 (717)
.+.....+.. +...+..+.+++.+||+.+|.+||++.||
T Consensus 223 --------~~~~~~~~~~---------------------------------~~~~~~~~~~li~~~l~~~p~~Rp~~~~i 261 (267)
T cd06628 223 --------KIGENASPEI---------------------------------PSNISSEAIDFLEKTFEIDHNKRPTAAEL 261 (267)
T ss_pred --------HHhccCCCcC---------------------------------CcccCHHHHHHHHHHccCCchhCcCHHHH
Confidence 0000001111 11225567889999999999999999999
Q ss_pred HH
Q 005045 699 VN 700 (717)
Q Consensus 699 l~ 700 (717)
++
T Consensus 262 l~ 263 (267)
T cd06628 262 LK 263 (267)
T ss_pred hh
Confidence 86
No 237
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=3.1e-34 Score=290.23 Aligned_cols=249 Identities=26% Similarity=0.435 Sum_probs=193.4
Q ss_pred cccCcccccceEEEEeC--CCc--hhhhHHhHhhhh-hHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceEEEEE
Q 005045 395 NLIGTGSFGSVYKGTLG--DGT--IVAIKVLKLQQQ-GALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFKALVF 469 (717)
Q Consensus 395 ~~ig~g~~g~v~~~~~~--~~~--~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~lv~ 469 (717)
+.||+|++|.||+|.+. .++ .||+|.+..... ...+.+..|++++++++||||+++++.+.. ...++||
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~------~~~~~v~ 74 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT------HPLMMVT 74 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC------CeEEEEE
Confidence 46899999999999864 233 589999876654 566789999999999999999999998532 5789999
Q ss_pred ecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeeccchh
Q 005045 470 EFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKF 549 (717)
Q Consensus 470 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~ 549 (717)
||+++++|.+++..... ..+++..+..++.|++.||+|||+. +++||||+|+||+++.++.+||+|||.+..
T Consensus 75 e~~~~~~L~~~l~~~~~-----~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~di~p~nil~~~~~~~kl~dfg~~~~ 146 (257)
T cd05040 75 ELAPLGSLLDRLRKDAL-----GHFLISTLCDYAVQIANGMRYLESK---RFIHRDLAARNILLASDDKVKIGDFGLMRA 146 (257)
T ss_pred EecCCCcHHHHHHhccc-----ccCcHHHHHHHHHHHHHHHHHHHhC---CccccccCcccEEEecCCEEEecccccccc
Confidence 99999999999876421 3579999999999999999999997 999999999999999999999999999987
Q ss_pred cccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHh-CCCCCCCCCCCchhhhHHHHhcCChh
Q 005045 550 LFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFT-GKRPTGDMFKDDFSIHMFVSMALPDH 627 (717)
Q Consensus 550 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~ 627 (717)
...... .........++..|+|||.+.+ .++.++|||||||++|+|++ |..||......+ ........
T Consensus 147 ~~~~~~----~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~--~~~~~~~~---- 216 (257)
T cd05040 147 LPQNED----HYVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQ--ILKKIDKE---- 216 (257)
T ss_pred cccccc----ceecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHHHhc----
Confidence 632111 1111123446788999999765 58999999999999999999 999986542211 11110000
Q ss_pred hhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHHHHH
Q 005045 628 VMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVNNLK 703 (717)
Q Consensus 628 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~~l~ 703 (717)
.... ..+..++..+.+++.+|++.+|++|||++|+++.|.
T Consensus 217 -----~~~~-------------------------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 217 -----GERL-------------------------------ERPEACPQDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred -----CCcC-------------------------------CCCccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 0000 011123567889999999999999999999999874
No 238
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=2.7e-34 Score=291.52 Aligned_cols=254 Identities=26% Similarity=0.473 Sum_probs=188.9
Q ss_pred cccCcccccceEEEEeC----CCchhhhHHhHhh-hhhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceEEEEE
Q 005045 395 NLIGTGSFGSVYKGTLG----DGTIVAIKVLKLQ-QQGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFKALVF 469 (717)
Q Consensus 395 ~~ig~g~~g~v~~~~~~----~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~lv~ 469 (717)
+.||+|+||.||+|.+. .+..||+|.+... .......+.+|+.+++.++||||+++++.+. ..++..++||
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~----~~~~~~~lv~ 76 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICL----PSEGSPLVVL 76 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEee----cCCCCcEEEE
Confidence 46899999999999843 3456899987533 3344577889999999999999999999763 2345678999
Q ss_pred ecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeeccchh
Q 005045 470 EFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKF 549 (717)
Q Consensus 470 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~ 549 (717)
||+++++|.+++.... ...++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+|||.++.
T Consensus 77 e~~~~~~L~~~~~~~~------~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlk~~nili~~~~~~kl~dfg~~~~ 147 (262)
T cd05058 77 PYMKHGDLRNFIRSET------HNPTVKDLIGFGLQVAKGMEYLASK---KFVHRDLAARNCMLDESFTVKVADFGLARD 147 (262)
T ss_pred ecCCCCCHHHHHHhcC------CCCCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCcccccc
Confidence 9999999999987542 3457778899999999999999997 999999999999999999999999999875
Q ss_pred cccccCCCCCCcceeecccccccccCCCccC-CCCCcccchhhHHHHHHHHHhC-CCCCCCCCCCchhhhHHHHhcCChh
Q 005045 550 LFEISDNPSKNQTVSIGLKGSIGYIPPEHMN-GQVSILGDIYSYGILLLEMFTG-KRPTGDMFKDDFSIHMFVSMALPDH 627 (717)
Q Consensus 550 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~sDvwslG~vl~elltg-~~p~~~~~~~~~~~~~~~~~~~~~~ 627 (717)
....... .........++..|+|||.+. +.++.++|||||||++|||++| ..||..... .......
T Consensus 148 ~~~~~~~---~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~--~~~~~~~------- 215 (262)
T cd05058 148 IYDKEYY---SVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDS--FDITVYL------- 215 (262)
T ss_pred ccCCcce---eecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCH--HHHHHHH-------
Confidence 4211100 001111234567899999964 4588999999999999999995 555643211 1111110
Q ss_pred hhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHHHHHHHHH
Q 005045 628 VMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVNNLKTIRN 707 (717)
Q Consensus 628 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~~l~~i~~ 707 (717)
....... .+..++..+.+++.+||+.+|++||++.||++.++++..
T Consensus 216 ----~~~~~~~------------------------------~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~~ 261 (262)
T cd05058 216 ----LQGRRLL------------------------------QPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIFS 261 (262)
T ss_pred ----hcCCCCC------------------------------CCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHhc
Confidence 0000000 011124568899999999999999999999999998764
No 239
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=9.5e-35 Score=308.57 Aligned_cols=206 Identities=25% Similarity=0.377 Sum_probs=170.6
Q ss_pred cccccccccCcccccceEEEEeC-CCchhhhHHhHhhh---hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCce
Q 005045 389 DNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQ---QGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDF 464 (717)
Q Consensus 389 ~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 464 (717)
++|++.+.||+|+||.||.|..+ +++.||+|++.... ......+..|+.++.+++|++|+++++.+ .+.+.
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~-----~~~~~ 75 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSF-----QDKRN 75 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEE-----EcCCE
Confidence 47899999999999999999965 78999999886432 33456788899999999999999999884 45568
Q ss_pred EEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeee
Q 005045 465 KALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDF 544 (717)
Q Consensus 465 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Df 544 (717)
.|+||||+++++|.+++... ..+++..+..++.|++.||+|||+. ||+||||||+||+++.+|.++|+||
T Consensus 76 ~~lv~E~~~gg~L~~~l~~~-------~~l~~~~~~~~~~qi~~~L~~lH~~---givHrDLkp~NIli~~~~~vkL~Df 145 (360)
T cd05627 76 LYLIMEFLPGGDMMTLLMKK-------DTLSEEATQFYIAETVLAIDAIHQL---GFIHRDIKPDNLLLDAKGHVKLSDF 145 (360)
T ss_pred EEEEEeCCCCccHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEeec
Confidence 99999999999999998754 5689999999999999999999997 9999999999999999999999999
Q ss_pred ccchhcccccCCCC----------------------------CCcceeecccccccccCCCccCC-CCCcccchhhHHHH
Q 005045 545 GLAKFLFEISDNPS----------------------------KNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGIL 595 (717)
Q Consensus 545 g~~~~~~~~~~~~~----------------------------~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~v 595 (717)
|++........... ..........||+.|+|||++.+ .++.++|||||||+
T Consensus 146 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvi 225 (360)
T cd05627 146 GLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVI 225 (360)
T ss_pred cCCcccccccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccce
Confidence 99875421110000 00001123468999999999655 48999999999999
Q ss_pred HHHHHhCCCCCCCC
Q 005045 596 LLEMFTGKRPTGDM 609 (717)
Q Consensus 596 l~elltg~~p~~~~ 609 (717)
+|||++|..||...
T Consensus 226 lyel~tG~~Pf~~~ 239 (360)
T cd05627 226 MYEMLIGYPPFCSE 239 (360)
T ss_pred eeecccCCCCCCCC
Confidence 99999999999754
No 240
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=2.5e-34 Score=290.68 Aligned_cols=251 Identities=25% Similarity=0.451 Sum_probs=194.4
Q ss_pred ccccccccccCcccccceEEEEeCCCchhhhHHhHhhhhhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceEEE
Q 005045 388 TDNFSKENLIGTGSFGSVYKGTLGDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFKAL 467 (717)
Q Consensus 388 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~l 467 (717)
..+|++.+.||+|++|.||+|.+.+++.+|+|.+..... ....+.+|+++++++.||+++++++.+. .....++
T Consensus 3 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~~~~ 76 (256)
T cd05112 3 PSELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAM-SEEDFIEEAQVMMKLSHPKLVQLYGVCT-----ERSPICL 76 (256)
T ss_pred hhHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCCC-CHHHHHHHHHHHHhCCCCCeeeEEEEEc-----cCCceEE
Confidence 357899999999999999999987788899998764322 2356888999999999999999999853 4457899
Q ss_pred EEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeeccc
Q 005045 468 VFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLA 547 (717)
Q Consensus 468 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~ 547 (717)
||||+++++|.+++.... ..+++..+..++.+++.|++|||+. +++||||+|+||+++.++.++|+|||.+
T Consensus 77 v~e~~~~~~L~~~~~~~~------~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~ 147 (256)
T cd05112 77 VFEFMEHGCLSDYLRAQR------GKFSQETLLGMCLDVCEGMAYLESS---NVIHRDLAARNCLVGENQVVKVSDFGMT 147 (256)
T ss_pred EEEcCCCCcHHHHHHhCc------cCCCHHHHHHHHHHHHHHHHHHHHC---CccccccccceEEEcCCCeEEECCCcce
Confidence 999999999999987542 4578899999999999999999997 9999999999999999999999999998
Q ss_pred hhcccccCCCCCCcceeecccccccccCCCccC-CCCCcccchhhHHHHHHHHHh-CCCCCCCCCCCchhhhHHHHhcCC
Q 005045 548 KFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMN-GQVSILGDIYSYGILLLEMFT-GKRPTGDMFKDDFSIHMFVSMALP 625 (717)
Q Consensus 548 ~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 625 (717)
...... .........++..|+|||.+. +.++.++|||||||++|+|++ |..||...... .......
T Consensus 148 ~~~~~~------~~~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~--~~~~~~~---- 215 (256)
T cd05112 148 RFVLDD------QYTSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNS--EVVETIN---- 215 (256)
T ss_pred eecccC------cccccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHH--HHHHHHh----
Confidence 754211 111112233567899999965 458899999999999999998 99998653211 1111100
Q ss_pred hhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHHHH
Q 005045 626 DHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVNNL 702 (717)
Q Consensus 626 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~~l 702 (717)
....... +...+..+.+++.+||+.+|++|||+.|+++.|
T Consensus 216 ----~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l 255 (256)
T cd05112 216 ----AGFRLYK---------------------------------PRLASQSVYELMQHCWKERPEDRPSFSLLLHQL 255 (256)
T ss_pred ----CCCCCCC---------------------------------CCCCCHHHHHHHHHHcccChhhCCCHHHHHHhh
Confidence 0000000 001145688999999999999999999999876
No 241
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-34 Score=299.34 Aligned_cols=252 Identities=23% Similarity=0.318 Sum_probs=203.5
Q ss_pred ccccccccccccCcccccceEEEEeC-CCchhhhHHhHhhhhh---HHHHHHHHHHHHhcCC-CCceeEEEEeeccccCC
Q 005045 386 KSTDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQQG---ALKSFIDECNALKSTR-HRNILRVITACSSVDLE 460 (717)
Q Consensus 386 ~~~~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~-h~ni~~~~~~~~~~~~~ 460 (717)
.....|++.+.+|+|.||.||.++.+ +|+.+|+|.+...... ....+.+|+++|+++. ||||+.+++. ++
T Consensus 32 ~~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~-----~e 106 (382)
T KOG0032|consen 32 DIKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDA-----FE 106 (382)
T ss_pred cccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEE-----EE
Confidence 34568999999999999999999976 6999999999866432 3468899999999997 9999999999 45
Q ss_pred CCceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCC----
Q 005045 461 GNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKD---- 536 (717)
Q Consensus 461 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~---- 536 (717)
.....++|||++.||.|.+.+... .+++..+..++.||+.|++|||+. ||+|||+||+|+++...
T Consensus 107 ~~~~~~lvmEL~~GGeLfd~i~~~--------~~sE~da~~~~~~il~av~~lH~~---gvvHrDlKpEN~L~~~~~~~~ 175 (382)
T KOG0032|consen 107 DPDSVYLVMELCEGGELFDRIVKK--------HYSERDAAGIIRQILEAVKYLHSL---GVVHRDLKPENLLLASKDEGS 175 (382)
T ss_pred cCCeEEEEEEecCCchHHHHHHHc--------cCCHHHHHHHHHHHHHHHHHHHhC---CceeccCCHHHeeeccccCCC
Confidence 556999999999999999998743 289999999999999999999998 99999999999999633
Q ss_pred CceEEeeeccchhcccccCCCCCCcceeecccccccccCCCccC-CCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchh
Q 005045 537 MTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMN-GQVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFS 615 (717)
Q Consensus 537 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~ 615 (717)
+.+|++|||++.... . .......+||+.|+|||++. ..++..+||||+||++|.|++|..||.........
T Consensus 176 ~~ik~~DFGla~~~~-------~-~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~ 247 (382)
T KOG0032|consen 176 GRIKLIDFGLAKFIK-------P-GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIF 247 (382)
T ss_pred CcEEEeeCCCceEcc-------C-CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHH
Confidence 579999999999762 1 33456688999999999987 57999999999999999999999999765332211
Q ss_pred hhHHHHhcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCH
Q 005045 616 IHMFVSMALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAM 695 (717)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~ 695 (717)
. ......+ .....+ -+..+....+++.+|+..||..|+|+
T Consensus 248 ~-~i~~~~~----------~f~~~~-----------------------------w~~is~~akd~i~~ll~~dp~~R~ta 287 (382)
T KOG0032|consen 248 L-AILRGDF----------DFTSEP-----------------------------WDDISESAKDFIRKLLEFDPRKRLTA 287 (382)
T ss_pred H-HHHcCCC----------CCCCCC-----------------------------ccccCHHHHHHHHHhcccCcccCCCH
Confidence 1 0000000 111111 11224556889999999999999999
Q ss_pred HHHHHH
Q 005045 696 NVVVNN 701 (717)
Q Consensus 696 ~eil~~ 701 (717)
+++++.
T Consensus 288 ~~~L~H 293 (382)
T KOG0032|consen 288 AQALQH 293 (382)
T ss_pred HHHhcC
Confidence 999984
No 242
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=3.7e-34 Score=293.30 Aligned_cols=259 Identities=25% Similarity=0.418 Sum_probs=200.5
Q ss_pred cccccccccccCcccccceEEEEeC-CCc----hhhhHHhHhhh-hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCC
Q 005045 387 STDNFSKENLIGTGSFGSVYKGTLG-DGT----IVAIKVLKLQQ-QGALKSFIDECNALKSTRHRNILRVITACSSVDLE 460 (717)
Q Consensus 387 ~~~~y~~~~~ig~g~~g~v~~~~~~-~~~----~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~ 460 (717)
..++|++.+.||+|+||.||+|.++ +|+ .+|+|...... ......+.+|+.+++++.||||+++++++..
T Consensus 5 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---- 80 (279)
T cd05057 5 KETELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS---- 80 (279)
T ss_pred CHHHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec----
Confidence 3468999999999999999999854 343 47888776543 3345678899999999999999999998743
Q ss_pred CCceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceE
Q 005045 461 GNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAH 540 (717)
Q Consensus 461 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~k 540 (717)
...++||||+++++|.+++.... ..+++..+..++.||+.|++|||+. +++||||+|+||+++.++.+|
T Consensus 81 --~~~~~v~e~~~~g~L~~~l~~~~------~~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~di~p~nil~~~~~~~k 149 (279)
T cd05057 81 --SQVQLITQLMPLGCLLDYVRNHK------DNIGSQYLLNWCVQIAKGMSYLEEK---RLVHRDLAARNVLVKTPQHVK 149 (279)
T ss_pred --CceEEEEecCCCCcHHHHHHhcc------CCCCHHHHHHHHHHHHHHHHHHHhC---CEEecccCcceEEEcCCCeEE
Confidence 47899999999999999987543 4589999999999999999999997 999999999999999999999
Q ss_pred EeeeccchhcccccCCCCCCcceeecccccccccCCCccC-CCCCcccchhhHHHHHHHHHh-CCCCCCCCCCCchhhhH
Q 005045 541 VGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMN-GQVSILGDIYSYGILLLEMFT-GKRPTGDMFKDDFSIHM 618 (717)
Q Consensus 541 l~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~ 618 (717)
|+|||.++....... ........++..|+|||.+. +.++.++|+|||||++||+++ |..||.....++ ...
T Consensus 150 L~dfg~~~~~~~~~~-----~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~--~~~ 222 (279)
T cd05057 150 ITDFGLAKLLDVDEK-----EYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVE--IPD 222 (279)
T ss_pred ECCCcccccccCccc-----ceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHH--HHH
Confidence 999999986521111 11111222456799999964 458999999999999999998 999997642211 111
Q ss_pred HHHhcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHH
Q 005045 619 FVSMALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVV 698 (717)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ei 698 (717)
.... .... ..+..++..+.+++.+||..+|++|||+.++
T Consensus 223 ~~~~------------~~~~-----------------------------~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l 261 (279)
T cd05057 223 LLEK------------GERL-----------------------------PQPPICTIDVYMVLVKCWMIDAESRPTFKEL 261 (279)
T ss_pred HHhC------------CCCC-----------------------------CCCCCCCHHHHHHHHHHcCCChhhCCCHHHH
Confidence 1110 0000 0111124567889999999999999999999
Q ss_pred HHHHHHHHHH
Q 005045 699 VNNLKTIRNC 708 (717)
Q Consensus 699 l~~l~~i~~~ 708 (717)
++.++++.+.
T Consensus 262 ~~~l~~~~~~ 271 (279)
T cd05057 262 INEFSKMARD 271 (279)
T ss_pred HHHHHHHHhC
Confidence 9999998654
No 243
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-34 Score=290.30 Aligned_cols=248 Identities=21% Similarity=0.316 Sum_probs=202.0
Q ss_pred cccccccccccCcccccceEEEEeC-CCchhhhHHhHhhh--hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCc
Q 005045 387 STDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQ--QGALKSFIDECNALKSTRHRNILRVITACSSVDLEGND 463 (717)
Q Consensus 387 ~~~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~ 463 (717)
.++-|...+.||+|.|..|-+|++- +|++||||++.... .-....+..|++.|+-+.|||||++|++ ++...
T Consensus 16 IAGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEV-----iDTQT 90 (864)
T KOG4717|consen 16 IAGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEV-----IDTQT 90 (864)
T ss_pred eeeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeeh-----hcccc
Confidence 4567999999999999999999954 89999999997653 3345678899999999999999999999 66677
Q ss_pred eEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEe-CCCCceEEe
Q 005045 464 FKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLL-DKDMTAHVG 542 (717)
Q Consensus 464 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll-~~~~~~kl~ 542 (717)
.+|+|+|.=++|+|+|||.++. ..+.+..+.++++||+.|+.|+|+. .+|||||||+||.+ ..-|-|||+
T Consensus 91 KlyLiLELGD~GDl~DyImKHe------~Gl~E~La~kYF~QI~~AI~YCHqL---HVVHRDLKPENVVFFEKlGlVKLT 161 (864)
T KOG4717|consen 91 KLYLILELGDGGDLFDYIMKHE------EGLNEDLAKKYFAQIVHAISYCHQL---HVVHRDLKPENVVFFEKLGLVKLT 161 (864)
T ss_pred eEEEEEEecCCchHHHHHHhhh------ccccHHHHHHHHHHHHHHHHHHhhh---hhhcccCCcceeEEeeecCceEee
Confidence 9999999999999999998775 5689999999999999999999998 89999999999766 577899999
Q ss_pred eeccchhcccccCCCCCCcceeecccccccccCCCccCCC-C-CcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHH
Q 005045 543 DFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNGQ-V-SILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFV 620 (717)
Q Consensus 543 Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~-~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~ 620 (717)
|||.+..+. +...-...+|...|.|||++.|. | .+++|||||||++|.|+.|+.||....+.+. +
T Consensus 162 DFGFSNkf~--------PG~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSET-L---- 228 (864)
T KOG4717|consen 162 DFGFSNKFQ--------PGKKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSET-L---- 228 (864)
T ss_pred eccccccCC--------CcchhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhh-h----
Confidence 999987652 22233456799999999997664 5 5889999999999999999999988754421 1
Q ss_pred HhcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHH
Q 005045 621 SMALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVN 700 (717)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~ 700 (717)
.-+.|=.. . .+...+.+..++|.+|+..||.+|.|.+||+.
T Consensus 229 --------TmImDCKY--------------------------t-----vPshvS~eCrdLI~sMLvRdPkkRAslEeI~s 269 (864)
T KOG4717|consen 229 --------TMIMDCKY--------------------------T-----VPSHVSKECRDLIQSMLVRDPKKRASLEEIVS 269 (864)
T ss_pred --------hhhhcccc--------------------------c-----CchhhhHHHHHHHHHHHhcCchhhccHHHHhc
Confidence 01111111 0 11122555678999999999999999999874
No 244
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=4.7e-34 Score=289.36 Aligned_cols=238 Identities=22% Similarity=0.382 Sum_probs=182.3
Q ss_pred cccCcccccceEEEEeCC-------------CchhhhHHhHhhhhhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCC
Q 005045 395 NLIGTGSFGSVYKGTLGD-------------GTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRVITACSSVDLEG 461 (717)
Q Consensus 395 ~~ig~g~~g~v~~~~~~~-------------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~ 461 (717)
+.||+|++|.||.|.... ...|++|++..........+.+|+.+++.++||||+++++++..
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~----- 75 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVR----- 75 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEec-----
Confidence 468999999999998431 22488888776655556678899999999999999999998643
Q ss_pred CceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCc---
Q 005045 462 NDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMT--- 538 (717)
Q Consensus 462 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~--- 538 (717)
....++||||+++++|..++.... ..+++..+..++.||++|++|||+. +++||||||+||+++.++.
T Consensus 76 ~~~~~lv~e~~~~~~l~~~~~~~~------~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~~~ 146 (262)
T cd05077 76 DVENIMVEEFVEFGPLDLFMHRKS------DVLTTPWKFKVAKQLASALSYLEDK---DLVHGNVCTKNILLAREGIDGE 146 (262)
T ss_pred CCCCEEEEecccCCCHHHHHHhcC------CCCCHHHHHHHHHHHHHHHHHhhhC---CeECCCCCcccEEEecCCccCC
Confidence 346799999999999998876432 4589999999999999999999997 9999999999999986654
Q ss_pred ----eEEeeeccchhcccccCCCCCCcceeecccccccccCCCccC--CCCCcccchhhHHHHHHHHH-hCCCCCCCCCC
Q 005045 539 ----AHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMN--GQVSILGDIYSYGILLLEMF-TGKRPTGDMFK 611 (717)
Q Consensus 539 ----~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~--~~~~~~sDvwslG~vl~ell-tg~~p~~~~~~ 611 (717)
++++|||.+.... ......++..|+|||.+. +.++.++|||||||++|+|+ +|..||.....
T Consensus 147 ~~~~~~l~d~g~~~~~~-----------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~ 215 (262)
T cd05077 147 CGPFIKLSDPGIPITVL-----------SRQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTL 215 (262)
T ss_pred CCceeEeCCCCCCcccc-----------CcccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcch
Confidence 8999999886541 111234678899999964 34889999999999999998 58888764321
Q ss_pred CchhhhHHHHhcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCC
Q 005045 612 DDFSIHMFVSMALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRE 691 (717)
Q Consensus 612 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~ 691 (717)
.+. ... ........ ......+.+++.+||+.+|++
T Consensus 216 ~~~--~~~------------~~~~~~~~-------------------------------~~~~~~~~~li~~cl~~dp~~ 250 (262)
T cd05077 216 AEK--ERF------------YEGQCMLV-------------------------------TPSCKELADLMTHCMNYDPNQ 250 (262)
T ss_pred hHH--HHH------------HhcCccCC-------------------------------CCChHHHHHHHHHHcCCChhh
Confidence 110 000 00000000 001345788999999999999
Q ss_pred CCCHHHHHHHH
Q 005045 692 RIAMNVVVNNL 702 (717)
Q Consensus 692 Rps~~eil~~l 702 (717)
||+++||++.|
T Consensus 251 Rp~~~~il~~~ 261 (262)
T cd05077 251 RPFFRAIMRDI 261 (262)
T ss_pred CcCHHHHHHhc
Confidence 99999999876
No 245
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=4.1e-34 Score=300.71 Aligned_cols=271 Identities=24% Similarity=0.406 Sum_probs=202.3
Q ss_pred cccccccccccccccCcccccceEEEEeC--------CCchhhhHHhHhhh-hhHHHHHHHHHHHHhcC-CCCceeEEEE
Q 005045 383 DISKSTDNFSKENLIGTGSFGSVYKGTLG--------DGTIVAIKVLKLQQ-QGALKSFIDECNALKST-RHRNILRVIT 452 (717)
Q Consensus 383 ~~~~~~~~y~~~~~ig~g~~g~v~~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~ni~~~~~ 452 (717)
++.....+|++.+.||+|+||.||.|.+. .+..||+|.+.... ....+.+.+|+++++++ +||||+++++
T Consensus 6 ~~~~~~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~ 85 (334)
T cd05100 6 KWELSRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLG 85 (334)
T ss_pred ccccCHhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeE
Confidence 34445568999999999999999999742 12358899876432 33457788999999999 8999999999
Q ss_pred eeccccCCCCceEEEEEecCCCCChhhhccCCCCCc---------ccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeee
Q 005045 453 ACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEH---------YQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAH 523 (717)
Q Consensus 453 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~---------~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH 523 (717)
.+. ..+..+++|||+++++|.+++....... .....+++..+..++.|++.|++|||++ +++|
T Consensus 86 ~~~-----~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---givH 157 (334)
T cd05100 86 ACT-----QDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQ---KCIH 157 (334)
T ss_pred EEc-----cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---Ceec
Confidence 853 3457899999999999999987532110 1124588899999999999999999997 9999
Q ss_pred cCCCCCCEEeCCCCceEEeeeccchhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHh-
Q 005045 524 CDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFT- 601 (717)
Q Consensus 524 ~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~ellt- 601 (717)
|||||+||+++.++.+||+|||.++....... ........++..|+|||++.+ .++.++|||||||++|+|++
T Consensus 158 ~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~ 232 (334)
T cd05100 158 RDLAARNVLVTEDNVMKIADFGLARDVHNIDY-----YKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTL 232 (334)
T ss_pred cccccceEEEcCCCcEEECCcccceecccccc-----cccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhc
Confidence 99999999999999999999999876521110 111111224567999999654 58899999999999999998
Q ss_pred CCCCCCCCCCCchhhhHHHHhcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHh
Q 005045 602 GKRPTGDMFKDDFSIHMFVSMALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIG 681 (717)
Q Consensus 602 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 681 (717)
|..||.....++ ...... ..... +.+..++..+.+++
T Consensus 233 g~~p~~~~~~~~--~~~~~~------------~~~~~-----------------------------~~~~~~~~~l~~li 269 (334)
T cd05100 233 GGSPYPGIPVEE--LFKLLK------------EGHRM-----------------------------DKPANCTHELYMIM 269 (334)
T ss_pred CCCCCCCCCHHH--HHHHHH------------cCCCC-----------------------------CCCCCCCHHHHHHH
Confidence 888886542111 100000 00000 01112355688999
Q ss_pred hccCCCCcCCCCCHHHHHHHHHHHHHHH
Q 005045 682 LMCSTTSPRERIAMNVVVNNLKTIRNCF 709 (717)
Q Consensus 682 ~~cl~~~p~~Rps~~eil~~l~~i~~~~ 709 (717)
.+||+.+|++|||+.|+++.|+++....
T Consensus 270 ~~cl~~~p~~Rps~~ell~~l~~~~~~~ 297 (334)
T cd05100 270 RECWHAVPSQRPTFKQLVEDLDRVLTVT 297 (334)
T ss_pred HHHcccChhhCcCHHHHHHHHHHHhhhc
Confidence 9999999999999999999999988543
No 246
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=2e-34 Score=296.00 Aligned_cols=263 Identities=24% Similarity=0.325 Sum_probs=200.2
Q ss_pred ccccccccccCcccccceEEEEeC-CCchhhhHHhHhhh-hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceE
Q 005045 388 TDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQ-QGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFK 465 (717)
Q Consensus 388 ~~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~ 465 (717)
.++|++.+.||+|++|.||++... +++.||+|++.... ....+.+.+|+++++.++||||+++++.+. .....
T Consensus 4 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-----~~~~~ 78 (284)
T cd06620 4 NEDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFL-----NENNI 78 (284)
T ss_pred HHHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEe-----cCCEE
Confidence 468999999999999999999965 68889999876442 344678899999999999999999999953 34689
Q ss_pred EEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeec
Q 005045 466 ALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFG 545 (717)
Q Consensus 466 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg 545 (717)
++||||+++++|.+++... +.+++..+..++.+++.|+.|||+. .+++||||+|+||+++.++.++|+|||
T Consensus 79 ~lv~e~~~~~~L~~~~~~~-------~~~~~~~~~~~~~~i~~~l~~LH~~--~~i~H~dl~p~nil~~~~~~~~l~d~g 149 (284)
T cd06620 79 CMCMEFMDCGSLDRIYKKG-------GPIPVEILGKIAVAVVEGLTYLYNV--HRIMHRDIKPSNILVNSRGQIKLCDFG 149 (284)
T ss_pred EEEEecCCCCCHHHHHHhc-------cCCCHHHHHHHHHHHHHHHHHHHHh--cCeeccCCCHHHEEECCCCcEEEccCC
Confidence 9999999999999998754 4689999999999999999999974 289999999999999999999999999
Q ss_pred cchhcccccCCCCCCcceeecccccccccCCCcc-CCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHHHhcC
Q 005045 546 LAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHM-NGQVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVSMAL 624 (717)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~-~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~ 624 (717)
++...... ......++..|+|||++ .+.++.++|||||||++|++++|..||.......... .....+
T Consensus 150 l~~~~~~~---------~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~--~~~~~~ 218 (284)
T cd06620 150 VSGELINS---------IADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQ--DDPMGI 218 (284)
T ss_pred cccchhhh---------ccCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhh--hhhhHH
Confidence 87654111 11234588899999995 4568899999999999999999999997653321100 000000
Q ss_pred ChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHHHHHH
Q 005045 625 PDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVNNLKT 704 (717)
Q Consensus 625 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~~l~~ 704 (717)
...+..++....+. ....+++..+.+++.+|++.+|++|||+.|+++...-
T Consensus 219 ~~~~~~~~~~~~~~-----------------------------~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~ 269 (284)
T cd06620 219 LDLLQQIVQEPPPR-----------------------------LPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPF 269 (284)
T ss_pred HHHHHHHhhccCCC-----------------------------CCchhcCHHHHHHHHHHhcCCcccCcCHHHHhcCccc
Confidence 00011111000000 0011245678899999999999999999999986433
No 247
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=4.5e-34 Score=288.81 Aligned_cols=249 Identities=21% Similarity=0.313 Sum_probs=196.7
Q ss_pred ccccccccCcccccceEEEEeC-CCchhhhHHhHhh--hhhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceEE
Q 005045 390 NFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQ--QQGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFKA 466 (717)
Q Consensus 390 ~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~ 466 (717)
+|+..+.||.|++|.||.++.. +++.+++|.+... .......+.+|++++++++|+||+++++++. +.+..+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-----~~~~~~ 75 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFM-----DDNTLL 75 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEe-----cCCeEE
Confidence 5899999999999999999954 7888999987643 2344567889999999999999999999953 456899
Q ss_pred EEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeecc
Q 005045 467 LVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGL 546 (717)
Q Consensus 467 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~ 546 (717)
++|||+++++|.+++..... ..+++..+..++.|++.|++|||+. +++||||+|+||+++.++.+||+|||.
T Consensus 76 ~~~e~~~~~~L~~~~~~~~~-----~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~ni~~~~~~~~kl~d~~~ 147 (256)
T cd08221 76 IEMEYANGGTLYDKIVRQKG-----QLFEEEMVLWYLFQIVSAVSYIHKA---GILHRDIKTLNIFLTKAGLIKLGDFGI 147 (256)
T ss_pred EEEEecCCCcHHHHHHhccc-----cCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChHhEEEeCCCCEEECcCcc
Confidence 99999999999999875421 4689999999999999999999997 999999999999999999999999999
Q ss_pred chhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHHHhcCC
Q 005045 547 AKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVSMALP 625 (717)
Q Consensus 547 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 625 (717)
+....... .......+++.|+|||...+ .++.++|||||||++|+|++|..||........
T Consensus 148 ~~~~~~~~-------~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~----------- 209 (256)
T cd08221 148 SKILGSEY-------SMAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLNL----------- 209 (256)
T ss_pred eEEccccc-------ccccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHH-----------
Confidence 87652111 11223458899999999755 478999999999999999999999865321110
Q ss_pred hhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHHH
Q 005045 626 DHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVNN 701 (717)
Q Consensus 626 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~~ 701 (717)
...+....... ....++..+.+++.+||+.+|++|||++|+++.
T Consensus 210 --~~~~~~~~~~~------------------------------~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~ 253 (256)
T cd08221 210 --VVKIVQGNYTP------------------------------VVSVYSSELISLVHSLLQQDPEKRPTADEVLDQ 253 (256)
T ss_pred --HHHHHcCCCCC------------------------------CccccCHHHHHHHHHHcccCcccCCCHHHHhhC
Confidence 00111000000 001225567889999999999999999999875
No 248
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=4.4e-34 Score=288.93 Aligned_cols=249 Identities=24% Similarity=0.342 Sum_probs=195.1
Q ss_pred ccccccccCcccccceEEEEeC-CCchhhhHHhHhhh--hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceEE
Q 005045 390 NFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQ--QGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFKA 466 (717)
Q Consensus 390 ~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~ 466 (717)
+|++.+.+|+|++|.+|.+... +|+.||+|.+.... ......+.+|++++++++||||+++++.+ ...+..+
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~~~~~ 75 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESF-----EENGNLY 75 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeee-----cCCCeEE
Confidence 5899999999999999999954 78899999876432 33456788999999999999999999984 4556899
Q ss_pred EEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeecc
Q 005045 467 LVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGL 546 (717)
Q Consensus 467 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~ 546 (717)
+||||+++++|.+++..... ..+++..+..++.|++.|++|||+. +++|+||+|+||+++.++.++|+|||.
T Consensus 76 lv~e~~~~~~l~~~~~~~~~-----~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~l~~~nil~~~~~~~~l~d~~~ 147 (256)
T cd08218 76 IVMDYCEGGDLYKKINAQRG-----VLFPEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTIKLGDFGI 147 (256)
T ss_pred EEEecCCCCcHHHHHHhccC-----CCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEEeeccc
Confidence 99999999999998865321 3578899999999999999999997 999999999999999999999999999
Q ss_pred chhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHHHhcCC
Q 005045 547 AKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVSMALP 625 (717)
Q Consensus 547 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 625 (717)
+...... ........++..|+|||+..+ .++.++|+|||||++|+|++|..||......+ .
T Consensus 148 ~~~~~~~-------~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~--~--------- 209 (256)
T cd08218 148 ARVLNST-------VELARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKN--L--------- 209 (256)
T ss_pred eeecCcc-------hhhhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHH--H---------
Confidence 8754211 111122347888999999654 47899999999999999999999986431110 0
Q ss_pred hhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHHH
Q 005045 626 DHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVNN 701 (717)
Q Consensus 626 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~~ 701 (717)
...+....... .+.+++..+.+++.+||+.+|++||++.||++.
T Consensus 210 --~~~~~~~~~~~------------------------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~ 253 (256)
T cd08218 210 --VLKIIRGSYPP------------------------------VSSHYSYDLRNLVSQLFKRNPRDRPSVNSILEK 253 (256)
T ss_pred --HHHHhcCCCCC------------------------------CcccCCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence 11111111000 111225568899999999999999999999863
No 249
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=7.4e-34 Score=289.53 Aligned_cols=253 Identities=27% Similarity=0.482 Sum_probs=190.4
Q ss_pred cccCcccccceEEEEeCC-------CchhhhHHhHhhh-hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceEE
Q 005045 395 NLIGTGSFGSVYKGTLGD-------GTIVAIKVLKLQQ-QGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFKA 466 (717)
Q Consensus 395 ~~ig~g~~g~v~~~~~~~-------~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~ 466 (717)
+.||+|++|.||.|+.++ ++.+++|.+.... ......+.+|+++++.++||||+++++++. ..+..+
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~ 75 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCL-----LNEPQY 75 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeec-----CCCCeE
Confidence 368999999999998542 2579999886442 234567889999999999999999999853 345789
Q ss_pred EEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCC-----ceEE
Q 005045 467 LVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDM-----TAHV 541 (717)
Q Consensus 467 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~-----~~kl 541 (717)
+||||+++++|.+++............+++..++.++.|++.|++|||+. +++|+||+|+||+++.++ .+++
T Consensus 76 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~~~~~l 152 (269)
T cd05044 76 IIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQM---HFIHRDLAARNCLVSEKGYDADRVVKI 152 (269)
T ss_pred EEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhC---CcccCCCChheEEEecCCCCCCcceEE
Confidence 99999999999999875322111224578899999999999999999997 999999999999999877 8999
Q ss_pred eeeccchhcccccCCCCCCcceeecccccccccCCCccC-CCCCcccchhhHHHHHHHHHh-CCCCCCCCCCCchhhhHH
Q 005045 542 GDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMN-GQVSILGDIYSYGILLLEMFT-GKRPTGDMFKDDFSIHMF 619 (717)
Q Consensus 542 ~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~ 619 (717)
+|||.+........ ........++..|+|||.+. +.++.++|||||||++|+|++ |..||...... .....
T Consensus 153 ~dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~--~~~~~ 225 (269)
T cd05044 153 GDFGLARDIYKSDY-----YRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQ--EVLQH 225 (269)
T ss_pred CCcccccccccccc-----cccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHH--HHHHH
Confidence 99999876522111 11112234567899999964 568999999999999999998 99998643211 11100
Q ss_pred HHhcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHH
Q 005045 620 VSMALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVV 699 (717)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil 699 (717)
. ...... ..+..++..+.+++.+||+.+|++||++++|+
T Consensus 226 ~------------~~~~~~-----------------------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~ 264 (269)
T cd05044 226 V------------TAGGRL-----------------------------QKPENCPDKIYQLMTNCWAQDPSERPTFDRIQ 264 (269)
T ss_pred H------------hcCCcc-----------------------------CCcccchHHHHHHHHHHcCCCcccCCCHHHHH
Confidence 0 000000 01122356788999999999999999999999
Q ss_pred HHHH
Q 005045 700 NNLK 703 (717)
Q Consensus 700 ~~l~ 703 (717)
+.|+
T Consensus 265 ~~l~ 268 (269)
T cd05044 265 EILQ 268 (269)
T ss_pred HHHh
Confidence 9885
No 250
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=6.4e-34 Score=292.22 Aligned_cols=199 Identities=26% Similarity=0.407 Sum_probs=166.0
Q ss_pred ccccccccCcccccceEEEEeC-CCchhhhHHhHhhh---hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceE
Q 005045 390 NFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQ---QGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFK 465 (717)
Q Consensus 390 ~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~ 465 (717)
.|+..+.||+|+||.||.|.+. +++.+|+|.+.... ......+.+|+++++.++|++|+.+.+.+ ..++..
T Consensus 1 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~-----~~~~~~ 75 (285)
T cd05632 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAY-----ETKDAL 75 (285)
T ss_pred CceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEE-----ecCCEE
Confidence 3778899999999999999964 78999999886432 22335577899999999999999998884 445689
Q ss_pred EEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeec
Q 005045 466 ALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFG 545 (717)
Q Consensus 466 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg 545 (717)
++||||+++++|.+++..... ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++.++|+|||
T Consensus 76 ~lv~e~~~~~~L~~~~~~~~~-----~~~~~~~~~~~~~ql~~~l~~lH~~---~iiH~dikp~Nili~~~~~~kl~Dfg 147 (285)
T cd05632 76 CLVLTIMNGGDLKFHIYNMGN-----PGFEEERALFYAAEILCGLEDLHRE---NTVYRDLKPENILLDDYGHIRISDLG 147 (285)
T ss_pred EEEEEeccCccHHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEECCCCCEEEecCC
Confidence 999999999999988864321 4689999999999999999999997 99999999999999999999999999
Q ss_pred cchhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHhCCCCCCCC
Q 005045 546 LAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRPTGDM 609 (717)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~ 609 (717)
.+..... ........|+..|+|||++.+ .++.++|+|||||++|+|++|..||...
T Consensus 148 ~~~~~~~--------~~~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~ 204 (285)
T cd05632 148 LAVKIPE--------GESIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGR 204 (285)
T ss_pred cceecCC--------CCcccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCC
Confidence 8865411 011123468999999999654 5899999999999999999999999754
No 251
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=1.3e-34 Score=297.70 Aligned_cols=269 Identities=23% Similarity=0.309 Sum_probs=193.1
Q ss_pred ccccccccCcccccceEEEEeC-CCchhhhHHhHhhh--hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceEE
Q 005045 390 NFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQ--QGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFKA 466 (717)
Q Consensus 390 ~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~ 466 (717)
+|++.+.||+|++|.||+|.++ +|+.||+|.+.... ......+.+|++++++++||||+++++. +.+....+
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~-----~~~~~~~~ 75 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDV-----LHSDKKLT 75 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHH-----hccCCceE
Confidence 5889999999999999999965 78999999886432 2233567789999999999999999988 44556899
Q ss_pred EEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeecc
Q 005045 467 LVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGL 546 (717)
Q Consensus 467 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~ 546 (717)
+|+||++ +++.+++.... ..+++..++.++.||++||+|||+. +++||||+|+||+++.++.++|+|||.
T Consensus 76 lv~e~~~-~~l~~~~~~~~------~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~ 145 (284)
T cd07839 76 LVFEYCD-QDLKKYFDSCN------GDIDPEIVKSFMFQLLKGLAFCHSH---NVLHRDLKPQNLLINKNGELKLADFGL 145 (284)
T ss_pred EEEecCC-CCHHHHHHhcC------CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEcCCCcEEECccch
Confidence 9999996 58888776432 4589999999999999999999997 999999999999999999999999999
Q ss_pred chhcccccCCCCCCcceeecccccccccCCCccCCC--CCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHHHhc-
Q 005045 547 AKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNGQ--VSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVSMA- 623 (717)
Q Consensus 547 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~- 623 (717)
+...... ........++..|+|||.+.+. ++.++|||||||++|+|++|..|+.................
T Consensus 146 ~~~~~~~-------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~ 218 (284)
T cd07839 146 ARAFGIP-------VRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLG 218 (284)
T ss_pred hhccCCC-------CCCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhC
Confidence 8754211 1111234567899999996553 68999999999999999999998644322211111111100
Q ss_pred CCh-h-h---hhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHH
Q 005045 624 LPD-H-V---MDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVV 698 (717)
Q Consensus 624 ~~~-~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ei 698 (717)
.+. . + .+..+....... .....-....+..+..+.+++.+||+.+|++|||++|+
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~i 278 (284)
T cd07839 219 TPTEESWPGVSKLPDYKPYPMY--------------------PATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEA 278 (284)
T ss_pred CCChHHhHHhhhcccccccCCC--------------------CCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHH
Confidence 000 0 0 000000000000 00000001112335677899999999999999999999
Q ss_pred HH
Q 005045 699 VN 700 (717)
Q Consensus 699 l~ 700 (717)
++
T Consensus 279 l~ 280 (284)
T cd07839 279 LQ 280 (284)
T ss_pred hc
Confidence 75
No 252
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=2.9e-34 Score=293.81 Aligned_cols=248 Identities=25% Similarity=0.380 Sum_probs=195.7
Q ss_pred ccccccccccCcccccceEEEEeC-CCchhhhHHhHhhh-hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceE
Q 005045 388 TDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQ-QGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFK 465 (717)
Q Consensus 388 ~~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~ 465 (717)
...|++.+.||+|++|.||.|.+. +++.||+|.+.... ....+.+.+|++++++++||||+++++.+ ......
T Consensus 3 ~~~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~ 77 (277)
T cd06642 3 EELFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSY-----LKGTKL 77 (277)
T ss_pred HHHHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhccc-----ccCCce
Confidence 346888999999999999999864 68889999876432 34456789999999999999999999984 445689
Q ss_pred EEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeec
Q 005045 466 ALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFG 545 (717)
Q Consensus 466 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg 545 (717)
++||||+++++|.+++.. ..+++..+..++.|++.|+.|||+. +++|+||+|+||+++.++.++++|||
T Consensus 78 ~lv~e~~~~~~L~~~~~~--------~~~~~~~~~~~~~~i~~~l~~lH~~---~ivH~dl~p~ni~i~~~~~~~l~dfg 146 (277)
T cd06642 78 WIIMEYLGGGSALDLLKP--------GPLEETYIATILREILKGLDYLHSE---RKIHRDIKAANVLLSEQGDVKLADFG 146 (277)
T ss_pred EEEEEccCCCcHHHHhhc--------CCCCHHHHHHHHHHHHHHHHHHhcC---CeeccCCChheEEEeCCCCEEEcccc
Confidence 999999999999998853 3478899999999999999999997 99999999999999999999999999
Q ss_pred cchhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHHHhcC
Q 005045 546 LAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVSMAL 624 (717)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~ 624 (717)
.+...... ........++..|+|||.+.+ .++.++|||||||++|+|++|..||....+.... ..
T Consensus 147 ~~~~~~~~-------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~--~~----- 212 (277)
T cd06642 147 VAGQLTDT-------QIKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVL--FL----- 212 (277)
T ss_pred ccccccCc-------chhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHH--hh-----
Confidence 98765211 111122457888999999765 4789999999999999999999998654222110 00
Q ss_pred ChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHHH
Q 005045 625 PDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVNN 701 (717)
Q Consensus 625 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~~ 701 (717)
+.....+. ....++..+.+++.+|++.+|++|||+.|+++.
T Consensus 213 ---~~~~~~~~---------------------------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06642 213 ---IPKNSPPT---------------------------------LEGQYSKPFKEFVEACLNKDPRFRPTAKELLKH 253 (277)
T ss_pred ---hhcCCCCC---------------------------------CCcccCHHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 00000000 011235567899999999999999999999984
No 253
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=9.3e-34 Score=288.20 Aligned_cols=204 Identities=25% Similarity=0.391 Sum_probs=168.0
Q ss_pred cccccccccCcccccceEEEEeC-CCchhhhHHhHhh-----hhhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCC
Q 005045 389 DNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQ-----QQGALKSFIDECNALKSTRHRNILRVITACSSVDLEGN 462 (717)
Q Consensus 389 ~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~-----~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~ 462 (717)
.+|++.+.+|+|++|.||+|... +++.|++|.+... ..+....+.+|+.++++++||||+++++.+.. ...
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---~~~ 78 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRD---RAE 78 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEc---CCC
Confidence 47899999999999999999964 6889999987533 12345678899999999999999999987542 124
Q ss_pred ceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEe
Q 005045 463 DFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVG 542 (717)
Q Consensus 463 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~ 542 (717)
...+++|||+++++|.+++... ..+++..+..++.|++.|++|||+. +++||||+|+||+++.++.++|+
T Consensus 79 ~~~~l~~e~~~~~~L~~~l~~~-------~~l~~~~~~~~~~qi~~~l~~LH~~---~i~H~~l~p~nil~~~~~~~~l~ 148 (266)
T cd06651 79 KTLTIFMEYMPGGSVKDQLKAY-------GALTESVTRKYTRQILEGMSYLHSN---MIVHRDIKGANILRDSAGNVKLG 148 (266)
T ss_pred CEEEEEEeCCCCCcHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEc
Confidence 5789999999999999998754 4578899999999999999999997 99999999999999999999999
Q ss_pred eeccchhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHhCCCCCCCC
Q 005045 543 DFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRPTGDM 609 (717)
Q Consensus 543 Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~ 609 (717)
|||.+......... ........++..|+|||.+.+ .++.++||||+||++|+|++|+.||...
T Consensus 149 dfg~~~~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~ 212 (266)
T cd06651 149 DFGASKRLQTICMS----GTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEY 212 (266)
T ss_pred cCCCcccccccccc----CCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCcccc
Confidence 99998765221111 111122457889999999765 4789999999999999999999999654
No 254
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=3.6e-34 Score=294.67 Aligned_cols=271 Identities=24% Similarity=0.321 Sum_probs=197.1
Q ss_pred cccccccccCcccccceEEEEeC-CCchhhhHHhHhhh--hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceE
Q 005045 389 DNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQ--QGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFK 465 (717)
Q Consensus 389 ~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~ 465 (717)
++|++.+.+|+|++|.||+|+++ +++.||+|++.... ....+.+.+|++++++++|+|++++++.+ ..+...
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~-----~~~~~~ 75 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVF-----RRKRKL 75 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEE-----eeCCEE
Confidence 47999999999999999999976 68999999876432 22345678999999999999999999985 345589
Q ss_pred EEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeec
Q 005045 466 ALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFG 545 (717)
Q Consensus 466 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg 545 (717)
++||||++++++..+.... ..+++..++.++.|++.||+|||+. +++||||+|+||+++.++.++|+|||
T Consensus 76 ~~v~e~~~~~~l~~~~~~~-------~~~~~~~~~~~~~ql~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~~l~dfg 145 (286)
T cd07847 76 HLVFEYCDHTVLNELEKNP-------RGVPEHLIKKIIWQTLQAVNFCHKH---NCIHRDVKPENILITKQGQIKLCDFG 145 (286)
T ss_pred EEEEeccCccHHHHHHhCC-------CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCChhhEEEcCCCcEEECccc
Confidence 9999999988888776543 4589999999999999999999997 99999999999999999999999999
Q ss_pred cchhcccccCCCCCCcceeecccccccccCCCccCC--CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHH-HHh
Q 005045 546 LAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG--QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMF-VSM 622 (717)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~-~~~ 622 (717)
.+........ ......++..|+|||.+.+ .++.++|||||||++|+|++|..||.+....+...... ...
T Consensus 146 ~~~~~~~~~~-------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~ 218 (286)
T cd07847 146 FARILTGPGD-------DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLG 218 (286)
T ss_pred cceecCCCcc-------cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhC
Confidence 9886522110 1123457788999999654 47899999999999999999999997654322111100 000
Q ss_pred cCChhhhhhcCCCC-----CCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHH
Q 005045 623 ALPDHVMDILDPSM-----PLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNV 697 (717)
Q Consensus 623 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~e 697 (717)
..........+... ............ ...+..+..+.+++.+||+.+|++|||+.|
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e 279 (286)
T cd07847 219 DLIPRHQQIFSTNQFFKGLSIPEPETREPLE-------------------SKFPNISSPALSFLKGCLQMDPTERLSCEE 279 (286)
T ss_pred CCChHHhhhcccccccccccCCCcccccCHH-------------------HHhccCCHHHHHHHHHHhcCCccccCCHHH
Confidence 11111111111100 000000000000 011122566889999999999999999999
Q ss_pred HHH
Q 005045 698 VVN 700 (717)
Q Consensus 698 il~ 700 (717)
++.
T Consensus 280 il~ 282 (286)
T cd07847 280 LLE 282 (286)
T ss_pred Hhc
Confidence 875
No 255
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=8.9e-34 Score=288.87 Aligned_cols=255 Identities=23% Similarity=0.331 Sum_probs=183.0
Q ss_pred cccCcccccceEEEEeC---CCchhhhHHhHhhh-hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceEEEEEe
Q 005045 395 NLIGTGSFGSVYKGTLG---DGTIVAIKVLKLQQ-QGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFKALVFE 470 (717)
Q Consensus 395 ~~ig~g~~g~v~~~~~~---~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~lv~e 470 (717)
+.||+|+||.||+|... ....+++|.+.... ......+.+|+.+++.++|+||+++++.+. .....++|||
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~-----~~~~~~lv~e 75 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCI-----ESIPYLLVLE 75 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEEC-----CCCceEEEEE
Confidence 36899999999999743 34467888765332 333467788999999999999999999853 4457899999
Q ss_pred cCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeeccchhc
Q 005045 471 FMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFL 550 (717)
Q Consensus 471 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~ 550 (717)
|+++++|.+++...... .....++..+..++.||+.|++|||+. +|+||||||+||+++.++.+||+|||.+...
T Consensus 76 ~~~~g~L~~~l~~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~ 150 (269)
T cd05042 76 FCPLGDLKNYLRSNRGM--VAQMAQKDVLQRMACEVASGLLWLHQA---DFIHSDLALRNCQLTADLSVKIGDYGLALEQ 150 (269)
T ss_pred eCCCCcHHHHHHhcccc--ccccccHHHHHHHHHHHHHHHHHHHhc---CEecccccHhheEecCCCcEEEecccccccc
Confidence 99999999998754321 113356788899999999999999998 9999999999999999999999999998653
Q ss_pred ccccCCCCCCcceeecccccccccCCCccCC--------CCCcccchhhHHHHHHHHHh-CCCCCCCCCCCchhhhHHHH
Q 005045 551 FEISDNPSKNQTVSIGLKGSIGYIPPEHMNG--------QVSILGDIYSYGILLLEMFT-GKRPTGDMFKDDFSIHMFVS 621 (717)
Q Consensus 551 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~ 621 (717)
.... .........++..|+|||+... .++.++|||||||++|||++ |..||....+.+ .......
T Consensus 151 ~~~~-----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~-~~~~~~~ 224 (269)
T cd05042 151 YPED-----YYITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQ-VLKQVVR 224 (269)
T ss_pred ccch-----heeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHH-HHHHHhh
Confidence 1110 0111122345677999998532 36789999999999999999 788886542211 1111100
Q ss_pred hcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHHH
Q 005045 622 MALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVNN 701 (717)
Q Consensus 622 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~~ 701 (717)
.. .....++.. ...++..+.+++..|+ .+|++|||++||++.
T Consensus 225 ~~----~~~~~~~~~---------------------------------~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~ 266 (269)
T cd05042 225 EQ----DIKLPKPQL---------------------------------DLKYSDRWYEVMQFCW-LDPETRPTAEEVHEL 266 (269)
T ss_pred cc----CccCCCCcc---------------------------------cccCCHHHHHHHHHHh-cCcccccCHHHHHHH
Confidence 00 000001111 1122555677888888 599999999999998
Q ss_pred HH
Q 005045 702 LK 703 (717)
Q Consensus 702 l~ 703 (717)
+.
T Consensus 267 l~ 268 (269)
T cd05042 267 LT 268 (269)
T ss_pred hc
Confidence 73
No 256
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=7e-34 Score=290.92 Aligned_cols=248 Identities=23% Similarity=0.364 Sum_probs=197.0
Q ss_pred ccccccccccCcccccceEEEEeC-CCchhhhHHhHhhh-hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceE
Q 005045 388 TDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQ-QGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFK 465 (717)
Q Consensus 388 ~~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~ 465 (717)
...|+..++||.|++|.||.|.++ +++.||+|.+.... ......+.+|+++++++.|+||+++++.+. ++...
T Consensus 3 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~ 77 (277)
T cd06640 3 EELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYL-----KGTKL 77 (277)
T ss_pred HHhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEE-----ECCEE
Confidence 357889999999999999999965 68899999886443 344578889999999999999999999954 44589
Q ss_pred EEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeec
Q 005045 466 ALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFG 545 (717)
Q Consensus 466 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg 545 (717)
++||||+++++|.+++.. ..+++..+..++.|++.|++|+|+. +++|+||+|+||+++.++.++++|||
T Consensus 78 ~lv~e~~~~~~L~~~i~~--------~~l~~~~~~~~~~~l~~~l~~lh~~---~ivH~dl~p~Nil~~~~~~~~l~dfg 146 (277)
T cd06640 78 WIIMEYLGGGSALDLLRA--------GPFDEFQIATMLKEILKGLDYLHSE---KKIHRDIKAANVLLSEQGDVKLADFG 146 (277)
T ss_pred EEEEecCCCCcHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHHhC---CccCcCCChhhEEEcCCCCEEEcccc
Confidence 999999999999999864 3478888999999999999999997 99999999999999999999999999
Q ss_pred cchhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHHHhcC
Q 005045 546 LAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVSMAL 624 (717)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~ 624 (717)
.+...... ........++..|+|||++.+ .++.++|+|||||++|+|++|..||....+.... .
T Consensus 147 ~~~~~~~~-------~~~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~--~------ 211 (277)
T cd06640 147 VAGQLTDT-------QIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVL--F------ 211 (277)
T ss_pred cceeccCC-------ccccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHh--h------
Confidence 98765211 111123457888999999655 4789999999999999999999998654321110 0
Q ss_pred ChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHHH
Q 005045 625 PDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVNN 701 (717)
Q Consensus 625 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~~ 701 (717)
........ .....++..+.+++.+||+.+|++||++.|+++.
T Consensus 212 ------~~~~~~~~-----------------------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06640 212 ------LIPKNNPP-----------------------------TLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKH 253 (277)
T ss_pred ------hhhcCCCC-----------------------------CCchhhhHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence 00000000 0122346678899999999999999999999865
No 257
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=5.3e-34 Score=290.62 Aligned_cols=253 Identities=28% Similarity=0.412 Sum_probs=188.8
Q ss_pred cccCcccccceEEEEeC-CCc--hhhhHHhHhh-hhhHHHHHHHHHHHHhcC-CCCceeEEEEeeccccCCCCceEEEEE
Q 005045 395 NLIGTGSFGSVYKGTLG-DGT--IVAIKVLKLQ-QQGALKSFIDECNALKST-RHRNILRVITACSSVDLEGNDFKALVF 469 (717)
Q Consensus 395 ~~ig~g~~g~v~~~~~~-~~~--~vavK~~~~~-~~~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~~~~~~~~~~lv~ 469 (717)
+.||+|++|.||+|..+ +++ .+++|.+... .....+.+.+|+++++++ +||||+++++.+. .....++||
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~-----~~~~~~lv~ 75 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACE-----HRGYLYLAI 75 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEe-----cCCCceEEE
Confidence 36899999999999965 444 4677877643 233456788999999999 8999999999854 345789999
Q ss_pred ecCCCCChhhhccCCCCCc---------ccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceE
Q 005045 470 EFMSNGNLDQWLHPSPAEH---------YQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAH 540 (717)
Q Consensus 470 e~~~~~~L~~~l~~~~~~~---------~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~k 540 (717)
||+++++|.+++....... .....+++..+..++.|++.|++|||+. +++||||||+||+++.++.+|
T Consensus 76 e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nili~~~~~~k 152 (270)
T cd05047 76 EYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAK 152 (270)
T ss_pred EeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccccceEEEcCCCeEE
Confidence 9999999999986532100 1123578999999999999999999997 999999999999999999999
Q ss_pred EeeeccchhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHh-CCCCCCCCCCCchhhhH
Q 005045 541 VGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFT-GKRPTGDMFKDDFSIHM 618 (717)
Q Consensus 541 l~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~ 618 (717)
|+|||++..... .........+..|+|||++.+ .++.++|||||||++|+|++ |..||......+ ...
T Consensus 153 l~dfgl~~~~~~--------~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~--~~~ 222 (270)
T cd05047 153 IADFGLSRGQEV--------YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE--LYE 222 (270)
T ss_pred ECCCCCccccch--------hhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHH--HHH
Confidence 999998753210 001111223567999999654 47899999999999999997 999996532111 100
Q ss_pred HHHhcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHH
Q 005045 619 FVSMALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVV 698 (717)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ei 698 (717)
.. ....... .+..++..+.+++.+|++.+|.+|||+.|+
T Consensus 223 ~~------------~~~~~~~-----------------------------~~~~~~~~~~~li~~~l~~~p~~Rps~~~i 261 (270)
T cd05047 223 KL------------PQGYRLE-----------------------------KPLNCDDEVYDLMRQCWREKPYERPSFAQI 261 (270)
T ss_pred HH------------hCCCCCC-----------------------------CCCcCCHHHHHHHHHHcccChhhCCCHHHH
Confidence 00 0000000 011124567899999999999999999999
Q ss_pred HHHHHHHH
Q 005045 699 VNNLKTIR 706 (717)
Q Consensus 699 l~~l~~i~ 706 (717)
++.|.++.
T Consensus 262 l~~l~~~~ 269 (270)
T cd05047 262 LVSLNRML 269 (270)
T ss_pred HHHHHHhh
Confidence 99998874
No 258
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=1e-33 Score=295.94 Aligned_cols=202 Identities=21% Similarity=0.276 Sum_probs=158.2
Q ss_pred cccCcccccceEEEEeC---CCchhhhHHhHhhhhhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceEEEEEec
Q 005045 395 NLIGTGSFGSVYKGTLG---DGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFKALVFEF 471 (717)
Q Consensus 395 ~~ig~g~~g~v~~~~~~---~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~lv~e~ 471 (717)
.+||+|+||.||+|+.+ +++.||+|.+.... ....+.+|++++++++||||+++++++.. ......++||||
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~---~~~~~~~lv~e~ 81 (317)
T cd07867 7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG--ISMSACREIALLRELKHPNVIALQKVFLS---HSDRKVWLLFDY 81 (317)
T ss_pred eEeccCCCeeEEEEEecCCCccceEEEEEecCCC--CcHHHHHHHHHHHhCCCCCeeeEEEEEec---cCCCeEEEEEee
Confidence 57999999999999954 45789999876432 22457789999999999999999998643 234578999999
Q ss_pred CCCCChhhhccCCCCC--cccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEe----CCCCceEEeeec
Q 005045 472 MSNGNLDQWLHPSPAE--HYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLL----DKDMTAHVGDFG 545 (717)
Q Consensus 472 ~~~~~L~~~l~~~~~~--~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll----~~~~~~kl~Dfg 545 (717)
++ +++.+++...... ......+++..+..++.||+.||+|||+. +|+||||||+||++ +.++.+||+|||
T Consensus 82 ~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG 157 (317)
T cd07867 82 AE-HDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADMG 157 (317)
T ss_pred eC-CcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEccCCCCCCcEEEeecc
Confidence 85 5887776532111 11124588999999999999999999997 99999999999999 466799999999
Q ss_pred cchhcccccCCCCCCcceeecccccccccCCCccCC--CCCcccchhhHHHHHHHHHhCCCCCCCC
Q 005045 546 LAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG--QVSILGDIYSYGILLLEMFTGKRPTGDM 609 (717)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~sDvwslG~vl~elltg~~p~~~~ 609 (717)
.++....... .........++..|+|||++.+ .++.++|||||||++|||+||..||...
T Consensus 158 ~a~~~~~~~~----~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~ 219 (317)
T cd07867 158 FARLFNSPLK----PLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred ceeccCCCcc----cccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccc
Confidence 9986522111 1112233568899999999754 3789999999999999999999999754
No 259
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=1.1e-33 Score=286.80 Aligned_cols=253 Identities=29% Similarity=0.501 Sum_probs=196.4
Q ss_pred cccCcccccceEEEEeC-C---CchhhhHHhHhhhhh-HHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceEEEEE
Q 005045 395 NLIGTGSFGSVYKGTLG-D---GTIVAIKVLKLQQQG-ALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFKALVF 469 (717)
Q Consensus 395 ~~ig~g~~g~v~~~~~~-~---~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~lv~ 469 (717)
+.||+|+||.||.|... . +..|++|.+...... ..+.+.+|++.++.++|+|++++++++. .....++||
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~-----~~~~~~lv~ 75 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCT-----EEEPLYLVL 75 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeec-----CCCceEEEE
Confidence 46899999999999965 3 788999998765433 3678889999999999999999999854 356899999
Q ss_pred ecCCCCChhhhccCCCCCc--ccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeeccc
Q 005045 470 EFMSNGNLDQWLHPSPAEH--YQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLA 547 (717)
Q Consensus 470 e~~~~~~L~~~l~~~~~~~--~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~ 547 (717)
||+++++|.+++....... .....+++..+..++.|++.|++|||+. +++||||+|+||+++.++.++|+|||.+
T Consensus 76 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~nili~~~~~~~l~dfg~~ 152 (262)
T cd00192 76 EYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASK---KFVHRDLAARNCLVGEDLVVKISDFGLS 152 (262)
T ss_pred EeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcC---CcccCccCcceEEECCCCcEEEcccccc
Confidence 9999999999987642100 0015689999999999999999999997 9999999999999999999999999999
Q ss_pred hhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHh-CCCCCCCCCCCchhhhHHHHhcCC
Q 005045 548 KFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFT-GKRPTGDMFKDDFSIHMFVSMALP 625 (717)
Q Consensus 548 ~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 625 (717)
........ ........++..|+|||.+.+ .++.++||||+||++|+|++ |..||...... ......
T Consensus 153 ~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--~~~~~~----- 220 (262)
T cd00192 153 RDVYDDDY-----YRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNE--EVLEYL----- 220 (262)
T ss_pred cccccccc-----cccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHH--HHHHHH-----
Confidence 87632211 112233457889999999654 58999999999999999999 69998765211 111110
Q ss_pred hhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHHHHH
Q 005045 626 DHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVNNLK 703 (717)
Q Consensus 626 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~~l~ 703 (717)
.+.... ..+..++..+.+++.+|++.+|++|||+.|+++.|+
T Consensus 221 ------~~~~~~------------------------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 221 ------RKGYRL------------------------------PKPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred ------HcCCCC------------------------------CCCccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 000000 012223567889999999999999999999998863
No 260
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=7.2e-34 Score=292.41 Aligned_cols=270 Identities=20% Similarity=0.274 Sum_probs=197.5
Q ss_pred ccccccccCcccccceEEEEeC-CCchhhhHHhHhhh--hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceEE
Q 005045 390 NFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQ--QGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFKA 466 (717)
Q Consensus 390 ~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~ 466 (717)
+|++.+.||.|++|.||+|.+. +|+.||+|++.... ......+.+|+.++++++||||+++++.+ ......+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~-----~~~~~~~ 75 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVF-----PHGSGFV 75 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEE-----ecCCeeE
Confidence 5889999999999999999965 78999999987543 33456788999999999999999999985 3456899
Q ss_pred EEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeecc
Q 005045 467 LVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGL 546 (717)
Q Consensus 467 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~ 546 (717)
+||||+ +++|.+++.... ..+++..++.++.||+.||+|||+. +++|+||+|+||+++.++.++|+|||.
T Consensus 76 ~v~e~~-~~~L~~~~~~~~------~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~~~~~~~~~l~dfg~ 145 (286)
T cd07832 76 LVMEYM-PSDLSEVLRDEE------RPLPEAQVKSYMRMLLKGVAYMHAN---GIMHRDLKPANLLISADGVLKIADFGL 145 (286)
T ss_pred EEeccc-CCCHHHHHHhcC------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCHHHEEEcCCCcEEEeeeee
Confidence 999999 999999986542 4689999999999999999999997 999999999999999999999999999
Q ss_pred chhcccccCCCCCCcceeecccccccccCCCccCC--CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHHHhcC
Q 005045 547 AKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG--QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVSMAL 624 (717)
Q Consensus 547 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~ 624 (717)
+........ .......++..|+|||.+.+ .++.++||||+||++|+|++|..||....+. .... .....+
T Consensus 146 ~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~-~~~~-~~~~~~ 217 (286)
T cd07832 146 ARLFSEEEP------RLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDI-EQLA-IVFRTL 217 (286)
T ss_pred cccccCCCC------CccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHH-HHHH-HHHHHc
Confidence 876522110 11223458889999999644 3689999999999999999998877543221 1111 111111
Q ss_pred C----hhhhhhcC---CCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHH
Q 005045 625 P----DHVMDILD---PSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNV 697 (717)
Q Consensus 625 ~----~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~e 697 (717)
. ..+..+.+ .............. ....++.+..+.+++.+|++.+|++|||+++
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~ 278 (286)
T cd07832 218 GTPNEETWPGLTSLPDYNKITFPESKPIPL-------------------EEIFPDASPEALDLLKGLLVYDPSKRLSAAE 278 (286)
T ss_pred CCCChHHHhhccCcchhhcccCCCCCcchH-------------------HHhCCCccHHHHHHHHHHhccChhhCCCHHH
Confidence 0 00110000 00000000000000 0011223567899999999999999999999
Q ss_pred HHHH
Q 005045 698 VVNN 701 (717)
Q Consensus 698 il~~ 701 (717)
+++.
T Consensus 279 ~l~h 282 (286)
T cd07832 279 ALRH 282 (286)
T ss_pred HhhC
Confidence 9863
No 261
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=4.6e-34 Score=299.75 Aligned_cols=201 Identities=25% Similarity=0.359 Sum_probs=167.9
Q ss_pred cccccccccCcccccceEEEEeC-CCchhhhHHhHhh---hhhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCce
Q 005045 389 DNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQ---QQGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDF 464 (717)
Q Consensus 389 ~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 464 (717)
++|++.++||+|+||.||.++.+ +++.+|+|++... .......+..|+.++..++|++|+++++.+ .+.+.
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~-----~~~~~ 75 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAF-----QDENN 75 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEE-----ecCCE
Confidence 47999999999999999999965 6788999988542 223345678899999999999999999884 44568
Q ss_pred EEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeee
Q 005045 465 KALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDF 544 (717)
Q Consensus 465 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Df 544 (717)
.++||||+++|+|.+++.... ..+++..++.++.||+.|++|||+. +|+||||||+||+++.++.+||+||
T Consensus 76 ~~lv~ey~~~g~L~~~l~~~~------~~l~~~~~~~~~~qi~~al~~lH~~---~iiHrDlkp~Nili~~~~~~kL~Df 146 (332)
T cd05623 76 LYLVMDYYVGGDLLTLLSKFE------DRLPEDMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADF 146 (332)
T ss_pred EEEEEeccCCCcHHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEeec
Confidence 999999999999999997532 4688999999999999999999997 9999999999999999999999999
Q ss_pred ccchhcccccCCCCCCcceeecccccccccCCCccC------CCCCcccchhhHHHHHHHHHhCCCCCCCC
Q 005045 545 GLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMN------GQVSILGDIYSYGILLLEMFTGKRPTGDM 609 (717)
Q Consensus 545 g~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~------~~~~~~sDvwslG~vl~elltg~~p~~~~ 609 (717)
|.+...... .........||+.|+|||++. +.++.++|||||||++|||++|+.||...
T Consensus 147 G~a~~~~~~------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~ 211 (332)
T cd05623 147 GSCLKLMED------GTVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAE 211 (332)
T ss_pred chheecccC------CcceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCC
Confidence 998654211 111122346899999999964 34789999999999999999999999653
No 262
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=1.7e-33 Score=286.56 Aligned_cols=254 Identities=22% Similarity=0.381 Sum_probs=181.6
Q ss_pred cccCcccccceEEEEeCCCc---hhhhHHhHhhh-hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceEEEEEe
Q 005045 395 NLIGTGSFGSVYKGTLGDGT---IVAIKVLKLQQ-QGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFKALVFE 470 (717)
Q Consensus 395 ~~ig~g~~g~v~~~~~~~~~---~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~lv~e 470 (717)
++||+|+||.||+|...++. .+++|.+.... ....+.+.+|+.+++.++||||+++++.+. .....++|||
T Consensus 1 ~~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~-----~~~~~~lv~e 75 (268)
T cd05086 1 QEIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCV-----EAIPYLLVFE 75 (268)
T ss_pred CcCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEec-----CCCccEEEEe
Confidence 36899999999999854333 34455544332 334578899999999999999999999854 3457899999
Q ss_pred cCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeeccchhc
Q 005045 471 FMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFL 550 (717)
Q Consensus 471 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~ 550 (717)
|+++++|.+++..... .....+...+..++.||+.||+|||+. +++||||||+||+++.++.++|+|||.+...
T Consensus 76 ~~~~~~L~~~l~~~~~---~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~ 149 (268)
T cd05086 76 YCELGDLKSYLSQEQW---HRRNSQLLLLQRMACEIAAGVTHMHKH---NFLHSDLALRNCFLTSDLTVKVGDYGIGPSR 149 (268)
T ss_pred cCCCCcHHHHHHhhhc---ccccccHHHHHHHHHHHHHHHHHHHHC---CeeccCCccceEEEcCCccEEeccccccccc
Confidence 9999999999875421 113467778889999999999999997 9999999999999999999999999987642
Q ss_pred ccccCCCCCCcceeecccccccccCCCccCC--------CCCcccchhhHHHHHHHHHh-CCCCCCCCCCCchhhhHHHH
Q 005045 551 FEISDNPSKNQTVSIGLKGSIGYIPPEHMNG--------QVSILGDIYSYGILLLEMFT-GKRPTGDMFKDDFSIHMFVS 621 (717)
Q Consensus 551 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~ 621 (717)
... ..........++..|+|||++.+ .++.++|||||||++|||++ |..||......+ .....
T Consensus 150 ~~~-----~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~-~~~~~-- 221 (268)
T cd05086 150 YKE-----DYIETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDRE-VLNHV-- 221 (268)
T ss_pred Ccc-----hhhhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHH-HHHHH--
Confidence 110 00111123457888999999632 24788999999999999997 566875432211 11111
Q ss_pred hcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHHH
Q 005045 622 MALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVNN 701 (717)
Q Consensus 622 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~~ 701 (717)
+........++.+... ....+.+++..|| .+|++|||++||++.
T Consensus 222 --~~~~~~~~~~~~~~~~---------------------------------~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~ 265 (268)
T cd05086 222 --IKDQQVKLFKPQLELP---------------------------------YSERWYEVLQFCW-LSPEKRATAEEVHRL 265 (268)
T ss_pred --HhhcccccCCCccCCC---------------------------------CcHHHHHHHHHHh-hCcccCCCHHHHHHH
Confidence 1111111122222111 1445677888999 579999999999987
Q ss_pred HH
Q 005045 702 LK 703 (717)
Q Consensus 702 l~ 703 (717)
|.
T Consensus 266 l~ 267 (268)
T cd05086 266 LT 267 (268)
T ss_pred hc
Confidence 63
No 263
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=7.6e-34 Score=290.23 Aligned_cols=247 Identities=24% Similarity=0.372 Sum_probs=195.7
Q ss_pred cccccccccCcccccceEEEEeC-CCchhhhHHhHhhh-hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceEE
Q 005045 389 DNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQ-QGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFKA 466 (717)
Q Consensus 389 ~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~ 466 (717)
++|++.+.+|.|++|.||+|.+. +++.||+|.+.... ......+.+|+++++.++|+||+++++.+. ++...+
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~ 75 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFL-----KGSKLW 75 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEE-----ECCeEE
Confidence 47999999999999999999965 78899999987543 334567889999999999999999999853 346899
Q ss_pred EEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeecc
Q 005045 467 LVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGL 546 (717)
Q Consensus 467 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~ 546 (717)
+|+||+++++|.+++... .+++..+..++.|++.|+.|||+. +++||||+|+||+++.++.++|+|||.
T Consensus 76 ~v~e~~~~~~L~~~~~~~--------~~~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~ 144 (274)
T cd06609 76 IIMEYCGGGSCLDLLKPG--------KLDETYIAFILREVLLGLEYLHEE---GKIHRDIKAANILLSEEGDVKLADFGV 144 (274)
T ss_pred EEEEeeCCCcHHHHHhhc--------CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEccccc
Confidence 999999999999998742 578999999999999999999997 999999999999999999999999999
Q ss_pred chhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHHHhcCC
Q 005045 547 AKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVSMALP 625 (717)
Q Consensus 547 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 625 (717)
+....... .......++..|+|||.+.+ .++.++|||||||++|+|++|..||....... ......
T Consensus 145 ~~~~~~~~-------~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~--~~~~~~---- 211 (274)
T cd06609 145 SGQLTSTM-------SKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMR--VLFLIP---- 211 (274)
T ss_pred ceeecccc-------cccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHH--HHHHhh----
Confidence 87762211 11223457888999999654 58999999999999999999999996542111 000000
Q ss_pred hhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHH
Q 005045 626 DHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVN 700 (717)
Q Consensus 626 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~ 700 (717)
....+.... ..++..+.+++.+||..+|++|||++++++
T Consensus 212 ----~~~~~~~~~--------------------------------~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~ 250 (274)
T cd06609 212 ----KNNPPSLEG--------------------------------NKFSKPFKDFVSLCLNKDPKERPSAKELLK 250 (274)
T ss_pred ----hcCCCCCcc--------------------------------cccCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 000011000 002456788999999999999999999986
No 264
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=6e-34 Score=291.17 Aligned_cols=260 Identities=21% Similarity=0.399 Sum_probs=197.7
Q ss_pred ccccccccccCcccccceEEEEeC------CCchhhhHHhHhhhhh-HHHHHHHHHHHHhcCCCCceeEEEEeeccccCC
Q 005045 388 TDNFSKENLIGTGSFGSVYKGTLG------DGTIVAIKVLKLQQQG-ALKSFIDECNALKSTRHRNILRVITACSSVDLE 460 (717)
Q Consensus 388 ~~~y~~~~~ig~g~~g~v~~~~~~------~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~ 460 (717)
..+|++.+.+|+|+||.||.|+.+ ..+.|++|.+...... ....+.+|++++++++|+||+++++.+.
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~----- 78 (275)
T cd05046 4 RSNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCR----- 78 (275)
T ss_pred hHhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEEC-----
Confidence 368999999999999999999854 3456888888654433 4678899999999999999999999853
Q ss_pred CCceEEEEEecCCCCChhhhccCCCCCc--ccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCc
Q 005045 461 GNDFKALVFEFMSNGNLDQWLHPSPAEH--YQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMT 538 (717)
Q Consensus 461 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~--~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~ 538 (717)
+....++||||+++++|.+++....... .....+++..+..++.|++.||+|||+. +++||||||+||+++.++.
T Consensus 79 ~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dlkp~Nili~~~~~ 155 (275)
T cd05046 79 EAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNA---RFVHRDLAARNCLVSSQRE 155 (275)
T ss_pred CCCcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhc---CcccCcCccceEEEeCCCc
Confidence 3457899999999999999987543110 0112589999999999999999999998 9999999999999999999
Q ss_pred eEEeeeccchhcccccCCCCCCcceeecccccccccCCCccC-CCCCcccchhhHHHHHHHHHh-CCCCCCCCCCCchhh
Q 005045 539 AHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMN-GQVSILGDIYSYGILLLEMFT-GKRPTGDMFKDDFSI 616 (717)
Q Consensus 539 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~ 616 (717)
++++|||.+...... .........++..|+|||.+. +.++.++|||||||++|+|++ |..||....... .
T Consensus 156 ~~l~~~~~~~~~~~~------~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~--~ 227 (275)
T cd05046 156 VKVSLLSLSKDVYNS------EYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEE--V 227 (275)
T ss_pred EEEcccccccccCcc------cccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchHH--H
Confidence 999999988654211 111122234567799999965 457899999999999999999 888986543221 1
Q ss_pred hHHHHhcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHH
Q 005045 617 HMFVSMALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMN 696 (717)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ 696 (717)
..... ....... ....++..+.+++.+||+.+|++|||+.
T Consensus 228 ~~~~~-----------~~~~~~~-----------------------------~~~~~~~~l~~~i~~~l~~~p~~Rp~~~ 267 (275)
T cd05046 228 LNRLQ-----------AGKLELP-----------------------------VPEGCPSRLYKLMTRCWAVNPKDRPSFS 267 (275)
T ss_pred HHHHH-----------cCCcCCC-----------------------------CCCCCCHHHHHHHHHHcCCCcccCCCHH
Confidence 11000 0000000 0112356788999999999999999999
Q ss_pred HHHHHHH
Q 005045 697 VVVNNLK 703 (717)
Q Consensus 697 eil~~l~ 703 (717)
|+++.|.
T Consensus 268 ~~l~~l~ 274 (275)
T cd05046 268 ELVSALG 274 (275)
T ss_pred HHHHHhc
Confidence 9999875
No 265
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=5.2e-34 Score=295.65 Aligned_cols=258 Identities=25% Similarity=0.433 Sum_probs=197.0
Q ss_pred ccccccccccCcccccceEEEEeC-CCc----hhhhHHhHhhh-hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCC
Q 005045 388 TDNFSKENLIGTGSFGSVYKGTLG-DGT----IVAIKVLKLQQ-QGALKSFIDECNALKSTRHRNILRVITACSSVDLEG 461 (717)
Q Consensus 388 ~~~y~~~~~ig~g~~g~v~~~~~~-~~~----~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~ 461 (717)
.++|+..+.||+|++|.||+|.+. +|+ .+|+|.+.... ......+.+|+.+++.++||||+++++.+..
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~----- 80 (303)
T cd05110 6 ETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLS----- 80 (303)
T ss_pred hhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcC-----
Confidence 567889999999999999999854 454 46888776443 2334568899999999999999999998642
Q ss_pred CceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEE
Q 005045 462 NDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHV 541 (717)
Q Consensus 462 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl 541 (717)
...++++||+++|++.+++.... ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||
T Consensus 81 -~~~~~v~e~~~~g~l~~~~~~~~------~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dikp~Nill~~~~~~kL 150 (303)
T cd05110 81 -PTIQLVTQLMPHGCLLDYVHEHK------DNIGSQLLLNWCVQIAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKI 150 (303)
T ss_pred -CCceeeehhcCCCCHHHHHHhcc------cCCCHHHHHHHHHHHHHHHHHHhhc---CeeccccccceeeecCCCceEE
Confidence 23579999999999999987542 4578999999999999999999998 9999999999999999999999
Q ss_pred eeeccchhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHh-CCCCCCCCCCCchhhhHH
Q 005045 542 GDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFT-GKRPTGDMFKDDFSIHMF 619 (717)
Q Consensus 542 ~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~ 619 (717)
+|||.+........ ........++..|+|||.+.+ .++.++|||||||++|||++ |..||....... ....
T Consensus 151 ~Dfg~~~~~~~~~~-----~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~--~~~~ 223 (303)
T cd05110 151 TDFGLARLLEGDEK-----EYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTRE--IPDL 223 (303)
T ss_pred ccccccccccCccc-----ccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHH
Confidence 99999986521111 111112335678999999654 57999999999999999998 999986542111 1111
Q ss_pred HHhcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHH
Q 005045 620 VSMALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVV 699 (717)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil 699 (717)
.... ...+ .+..++..+.+++.+||..+|++||+++|++
T Consensus 224 ~~~~----------~~~~-------------------------------~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~ 262 (303)
T cd05110 224 LEKG----------ERLP-------------------------------QPPICTIDVYMVMVKCWMIDADSRPKFKELA 262 (303)
T ss_pred HHCC----------CCCC-------------------------------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHH
Confidence 1100 0000 0011244578899999999999999999999
Q ss_pred HHHHHHHHH
Q 005045 700 NNLKTIRNC 708 (717)
Q Consensus 700 ~~l~~i~~~ 708 (717)
+.+.++...
T Consensus 263 ~~l~~~~~~ 271 (303)
T cd05110 263 AEFSRMARD 271 (303)
T ss_pred HHHHHHHhc
Confidence 999998754
No 266
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=2.7e-34 Score=295.57 Aligned_cols=275 Identities=23% Similarity=0.318 Sum_probs=196.9
Q ss_pred cccccccccCcccccceEEEEeC-CCchhhhHHhHhhh--hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceE
Q 005045 389 DNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQ--QGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFK 465 (717)
Q Consensus 389 ~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~ 465 (717)
++|++.+.||+|++|.||.|.++ +++.||+|++.... ....+.+.+|+++++.++||||+++++++ ..++..
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~ 75 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVF-----RRKKRL 75 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhc-----ccCCeE
Confidence 47999999999999999999975 68899999886432 22356678899999999999999999884 456689
Q ss_pred EEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeec
Q 005045 466 ALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFG 545 (717)
Q Consensus 466 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg 545 (717)
++||||++++++.++.... ..+++..++.++.||+.|++|||+. +++||||+|+||+++.++.++|+|||
T Consensus 76 ~lv~e~~~~~~l~~~~~~~-------~~~~~~~~~~~~~~i~~~l~~LH~~---~i~h~~l~p~ni~~~~~~~~~l~dfg 145 (286)
T cd07846 76 YLVFEFVDHTVLDDLEKYP-------NGLDESRVRKYLFQILRGIEFCHSH---NIIHRDIKPENILVSQSGVVKLCDFG 145 (286)
T ss_pred EEEEecCCccHHHHHHhcc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCcEEEEeee
Confidence 9999999998888876543 4589999999999999999999997 99999999999999999999999999
Q ss_pred cchhcccccCCCCCCcceeecccccccccCCCccCC--CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHH--HH
Q 005045 546 LAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG--QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMF--VS 621 (717)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~--~~ 621 (717)
.+....... .......++..|+|||++.+ .++.++|||||||++|+|++|..||......+ ..... ..
T Consensus 146 ~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~-~~~~~~~~~ 217 (286)
T cd07846 146 FARTLAAPG-------EVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDID-QLYHIIKCL 217 (286)
T ss_pred eeeeccCCc-------cccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHH-HHHHHHHHh
Confidence 987652111 11123457889999999654 36889999999999999999999986432211 00000 00
Q ss_pred hcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHH
Q 005045 622 MALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVN 700 (717)
Q Consensus 622 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~ 700 (717)
..+........+....... .. ..............+..+..+.+++.+||+.+|++||+++|+++
T Consensus 218 ~~~~~~~~~~~~~~~~~~~-------------~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 282 (286)
T cd07846 218 GNLIPRHQEIFQKNPLFAG-------------MR-LPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLH 282 (286)
T ss_pred CCCchhhHHHhccchHhhc-------------cc-cccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhc
Confidence 1111111111110000000 00 00000000000112234667899999999999999999999986
No 267
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=2.9e-34 Score=302.05 Aligned_cols=282 Identities=22% Similarity=0.259 Sum_probs=200.2
Q ss_pred cccccccccccCcccccceEEEEeC-CCchhhhHHhHhh-hhhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCce
Q 005045 387 STDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQ-QQGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDF 464 (717)
Q Consensus 387 ~~~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 464 (717)
.+++|++.++||+|++|.||.|.+. +|+.||+|++... .......+.+|+.++++++|+||+++++.+..........
T Consensus 3 ~~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 82 (336)
T cd07849 3 VGPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFND 82 (336)
T ss_pred cccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccce
Confidence 3578999999999999999999954 7899999988643 2334566788999999999999999998876554555567
Q ss_pred EEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeee
Q 005045 465 KALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDF 544 (717)
Q Consensus 465 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Df 544 (717)
.++|+||++ +++.+++.. ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 83 ~~lv~e~~~-~~l~~~~~~--------~~l~~~~~~~i~~ql~~aL~~LH~~---~ivH~dlkp~Nill~~~~~~kl~df 150 (336)
T cd07849 83 VYIVQELME-TDLYKLIKT--------QHLSNDHIQYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTNCDLKICDF 150 (336)
T ss_pred EEEEehhcc-cCHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEECcc
Confidence 899999995 588777753 4589999999999999999999998 9999999999999999999999999
Q ss_pred ccchhcccccCCCCCCcceeecccccccccCCCccCC--CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHHHh
Q 005045 545 GLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG--QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVSM 622 (717)
Q Consensus 545 g~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~ 622 (717)
|.+........ .........++..|+|||.+.+ .++.++||||+||++|+|++|+.||....... ....+..
T Consensus 151 g~~~~~~~~~~----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~--~~~~~~~ 224 (336)
T cd07849 151 GLARIADPEHD----HTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLH--QLNLILG 224 (336)
T ss_pred cceeecccccc----ccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHH
Confidence 99876422111 1111223467889999998543 47899999999999999999999996532111 0000100
Q ss_pred cC----ChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHH
Q 005045 623 AL----PDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVV 698 (717)
Q Consensus 623 ~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ei 698 (717)
.+ ++.+..+.+... .+.. ...............+..+..+.+++.+||+.+|++|||+.|+
T Consensus 225 ~~~~~~~~~~~~~~~~~~-----------~~~~----~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~ 289 (336)
T cd07849 225 VLGTPSQEDLNCIISLRA-----------RNYI----KSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEA 289 (336)
T ss_pred HcCCCCHHHHHHhhchhh-----------hhHH----hhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHH
Confidence 00 011111111000 0000 0000000000000112235668899999999999999999999
Q ss_pred HHH
Q 005045 699 VNN 701 (717)
Q Consensus 699 l~~ 701 (717)
++.
T Consensus 290 l~h 292 (336)
T cd07849 290 LAH 292 (336)
T ss_pred hcC
Confidence 875
No 268
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=5.5e-34 Score=298.89 Aligned_cols=201 Identities=25% Similarity=0.345 Sum_probs=168.8
Q ss_pred cccccccccCcccccceEEEEeC-CCchhhhHHhHhh---hhhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCce
Q 005045 389 DNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQ---QQGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDF 464 (717)
Q Consensus 389 ~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 464 (717)
++|++.+.||+|+||.||+++.+ +++.||+|++... .......+.+|..++..+.|++|+++++++ .+.+.
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~-----~~~~~ 75 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAF-----QDENY 75 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEE-----EcCCE
Confidence 47999999999999999999965 7888999988643 223345678899999999999999999984 45568
Q ss_pred EEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeee
Q 005045 465 KALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDF 544 (717)
Q Consensus 465 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Df 544 (717)
.|+||||+++|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 76 ~~lv~Ey~~gg~L~~~l~~~~------~~l~~~~~~~~~~qi~~~L~~lH~~---~iiHrDlkp~Nill~~~~~~kl~Df 146 (331)
T cd05624 76 LYLVMDYYVGGDLLTLLSKFE------DRLPEDMARFYIAEMVLAIHSIHQL---HYVHRDIKPDNVLLDMNGHIRLADF 146 (331)
T ss_pred EEEEEeCCCCCcHHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCchHHEEEcCCCCEEEEec
Confidence 999999999999999997532 4688999999999999999999997 9999999999999999999999999
Q ss_pred ccchhcccccCCCCCCcceeecccccccccCCCccCC------CCCcccchhhHHHHHHHHHhCCCCCCCC
Q 005045 545 GLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG------QVSILGDIYSYGILLLEMFTGKRPTGDM 609 (717)
Q Consensus 545 g~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~------~~~~~sDvwslG~vl~elltg~~p~~~~ 609 (717)
|.+...... .........|++.|+|||++.+ .++.++|||||||++|+|++|+.||...
T Consensus 147 G~a~~~~~~------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~ 211 (331)
T cd05624 147 GSCLKMNQD------GTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAE 211 (331)
T ss_pred cceeeccCC------CceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCC
Confidence 998754211 1111223458999999999653 4788999999999999999999999653
No 269
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=6.3e-34 Score=292.80 Aligned_cols=253 Identities=22% Similarity=0.342 Sum_probs=195.6
Q ss_pred cccccccccCcccccceEEEEeC-CCchhhhHHhHhh-hhhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceEE
Q 005045 389 DNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQ-QQGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFKA 466 (717)
Q Consensus 389 ~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~ 466 (717)
++|++.+.||+|++|.||+|.++ +++.||+|.+... .......+.+|++++++++|+||+++++.+ ...+..+
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~-----~~~~~~~ 75 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAF-----FIEGAVY 75 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhhe-----ecCCeEE
Confidence 47899999999999999999965 8899999987643 233456788999999999999999999984 3456899
Q ss_pred EEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeecc
Q 005045 467 LVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGL 546 (717)
Q Consensus 467 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~ 546 (717)
+||||+++++|.+++.... ....+++..+..++.|++.|+.|||+. .+++||||+|+||+++.++.++|+|||.
T Consensus 76 lv~e~~~~~~l~~~~~~~~----~~~~~~~~~~~~~~~~i~~~l~~LH~~--~~i~H~dl~p~nil~~~~~~~~l~dfg~ 149 (286)
T cd06622 76 MCMEYMDAGSLDKLYAGGV----ATEGIPEDVLRRITYAVVKGLKFLKEE--HNIIHRDVKPTNVLVNGNGQVKLCDFGV 149 (286)
T ss_pred EEEeecCCCCHHHHHHhcc----ccCCCCHHHHHHHHHHHHHHHHHHHhc--CCEeeCCCCHHHEEECCCCCEEEeecCC
Confidence 9999999999999887532 114689999999999999999999974 2899999999999999999999999999
Q ss_pred chhcccccCCCCCCcceeecccccccccCCCccCCC-------CCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHH
Q 005045 547 AKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNGQ-------VSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMF 619 (717)
Q Consensus 547 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-------~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~ 619 (717)
+..... .......++..|+|||.+.+. ++.++|||||||++|+|++|..||........ ..
T Consensus 150 ~~~~~~---------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~--~~- 217 (286)
T cd06622 150 SGNLVA---------SLAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANI--FA- 217 (286)
T ss_pred cccccC---------CccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhH--HH-
Confidence 875411 111234577889999996432 47899999999999999999999965321110 00
Q ss_pred HHhcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHH
Q 005045 620 VSMALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVV 699 (717)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil 699 (717)
.+..+.+..... .+.+++..+.+++.+||+.+|++||+++|++
T Consensus 218 -------~~~~~~~~~~~~------------------------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~ 260 (286)
T cd06622 218 -------QLSAIVDGDPPT------------------------------LPSGYSDDAQDFVAKCLNKIPNRRPTYAQLL 260 (286)
T ss_pred -------HHHHHhhcCCCC------------------------------CCcccCHHHHHHHHHHcccCcccCCCHHHHh
Confidence 011111100000 1122356678899999999999999999998
Q ss_pred HH
Q 005045 700 NN 701 (717)
Q Consensus 700 ~~ 701 (717)
+.
T Consensus 261 ~~ 262 (286)
T cd06622 261 EH 262 (286)
T ss_pred cC
Confidence 74
No 270
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=1e-33 Score=293.83 Aligned_cols=259 Identities=21% Similarity=0.276 Sum_probs=194.1
Q ss_pred cccccccccCcccccceEEEEeC-CCchhhhHHhHhhh---hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCce
Q 005045 389 DNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQ---QGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDF 464 (717)
Q Consensus 389 ~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 464 (717)
++|++.+.+|+|++|.||++..+ +++.|++|.+.... ......+.+|+++++.++||||+++++.+ ..++.
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~-----~~~~~ 75 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSF-----ETKRH 75 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEE-----ecCCE
Confidence 47899999999999999999965 68889999876543 23456788999999999999999999884 44568
Q ss_pred EEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeee
Q 005045 465 KALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDF 544 (717)
Q Consensus 465 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Df 544 (717)
.++||||++|++|.+++... ..+++..+..++.|++.|++|||+. +++||||+|+||+++.++.++|+||
T Consensus 76 ~~lv~e~~~g~~L~~~l~~~-------~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~NIll~~~~~~~l~df 145 (305)
T cd05609 76 LCMVMEYVEGGDCATLLKNI-------GALPVDMARMYFAETVLALEYLHNY---GIVHRDLKPDNLLITSMGHIKLTDF 145 (305)
T ss_pred EEEEEecCCCCcHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHEEECCCCCEEEeeC
Confidence 99999999999999999754 4589999999999999999999997 9999999999999999999999999
Q ss_pred ccchhcccccCCC--------CCCcceeecccccccccCCCccC-CCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchh
Q 005045 545 GLAKFLFEISDNP--------SKNQTVSIGLKGSIGYIPPEHMN-GQVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFS 615 (717)
Q Consensus 545 g~~~~~~~~~~~~--------~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~ 615 (717)
|.+.......... ...........++..|+|||.+. +.++.++|+|||||++|+|++|..||.+.....
T Consensus 146 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~-- 223 (305)
T cd05609 146 GLSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEE-- 223 (305)
T ss_pred CCccccCcCccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--
Confidence 9886421100000 00001111245788899999964 458999999999999999999999996432111
Q ss_pred hhHHHHhcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCH
Q 005045 616 IHMFVSMALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAM 695 (717)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~ 695 (717)
.... .......... ....++..+.+++.+||+.+|++||++
T Consensus 224 ~~~~-----------~~~~~~~~~~----------------------------~~~~~~~~~~~li~~~l~~~P~~R~~~ 264 (305)
T cd05609 224 LFGQ-----------VISDDIEWPE----------------------------GDEALPADAQDLISRLLRQNPLERLGT 264 (305)
T ss_pred HHHH-----------HHhcccCCCC----------------------------ccccCCHHHHHHHHHHhccChhhccCc
Confidence 0000 0000000000 001225567899999999999999996
Q ss_pred HHHHHHHH
Q 005045 696 NVVVNNLK 703 (717)
Q Consensus 696 ~eil~~l~ 703 (717)
.++.+.++
T Consensus 265 ~~~~~ll~ 272 (305)
T cd05609 265 GGAFEVKQ 272 (305)
T ss_pred cCHHHHHh
Confidence 55555444
No 271
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=1.4e-33 Score=286.87 Aligned_cols=204 Identities=25% Similarity=0.374 Sum_probs=167.4
Q ss_pred cccccccccCcccccceEEEEeC-CCchhhhHHhHhh-----hhhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCC
Q 005045 389 DNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQ-----QQGALKSFIDECNALKSTRHRNILRVITACSSVDLEGN 462 (717)
Q Consensus 389 ~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~-----~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~ 462 (717)
.+|++.+.||+|++|.||.|..+ +++.||+|.+... .......+.+|++++++++||||+++++++.+. ..
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~---~~ 78 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDP---ME 78 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccC---CC
Confidence 47899999999999999999965 6889999987532 123356788999999999999999999985321 23
Q ss_pred ceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEe
Q 005045 463 DFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVG 542 (717)
Q Consensus 463 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~ 542 (717)
...+++|||+++++|.+++... ..+++..+..++.|++.||+|||+. +++|+||+|+||+++.++.++|+
T Consensus 79 ~~~~~v~e~~~~~~L~~~l~~~-------~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~ 148 (265)
T cd06652 79 RTLSIFMEHMPGGSIKDQLKSY-------GALTENVTRKYTRQILEGVSYLHSN---MIVHRDIKGANILRDSVGNVKLG 148 (265)
T ss_pred ceEEEEEEecCCCcHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEecCCCCEEEC
Confidence 4688999999999999998754 4578888999999999999999997 99999999999999999999999
Q ss_pred eeccchhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHhCCCCCCCC
Q 005045 543 DFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRPTGDM 609 (717)
Q Consensus 543 Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~ 609 (717)
|||.+......... ........++..|+|||.+.+ .++.++|||||||++|+|++|+.||...
T Consensus 149 Dfg~~~~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~ 212 (265)
T cd06652 149 DFGASKRLQTICLS----GTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEF 212 (265)
T ss_pred cCcccccccccccc----ccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCcc
Confidence 99998765221111 111122447889999999654 4789999999999999999999999653
No 272
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=5.8e-34 Score=287.64 Aligned_cols=248 Identities=29% Similarity=0.499 Sum_probs=193.5
Q ss_pred cccccccccccCcccccceEEEEeCCCchhhhHHhHhhhhhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceEE
Q 005045 387 STDNFSKENLIGTGSFGSVYKGTLGDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFKA 466 (717)
Q Consensus 387 ~~~~y~~~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~ 466 (717)
..++|++.+.+|+|++|.||.+.. +++.||+|.+.... ....+.+|+.+++.++|||++++++.+.. +..+
T Consensus 4 ~~~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~------~~~~ 74 (254)
T cd05083 4 NLQKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDV--TAQAFLEETAVMTKLHHKNLVRLLGVILH------NGLY 74 (254)
T ss_pred cHHHceeeeeeccCCCCceEeccc-CCCceEEEeecCcc--hHHHHHHHHHHHHhCCCCCcCeEEEEEcC------CCcE
Confidence 346799999999999999999875 67889999886432 23578899999999999999999988532 2369
Q ss_pred EEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeecc
Q 005045 467 LVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGL 546 (717)
Q Consensus 467 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~ 546 (717)
+||||+++++|.+++..... ..+++..+..++.|++.|++|||+. +++||||+|+||+++.++.+||+|||.
T Consensus 75 ~v~e~~~~~~L~~~l~~~~~-----~~~~~~~~~~~~~qi~~al~~lH~~---~~~H~dl~p~nili~~~~~~kl~Dfg~ 146 (254)
T cd05083 75 IVMELMSKGNLVNFLRTRGR-----ALVSVIQLLQFSLDVAEGMEYLESK---KLVHRDLAARNILVSEDGVAKVSDFGL 146 (254)
T ss_pred EEEECCCCCCHHHHHHhcCc-----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCcEEECCCcc
Confidence 99999999999999875421 4578999999999999999999997 999999999999999999999999998
Q ss_pred chhcccccCCCCCCcceeecccccccccCCCccC-CCCCcccchhhHHHHHHHHHh-CCCCCCCCCCCchhhhHHHHhcC
Q 005045 547 AKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMN-GQVSILGDIYSYGILLLEMFT-GKRPTGDMFKDDFSIHMFVSMAL 624 (717)
Q Consensus 547 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 624 (717)
+...... ......+..|+|||.+. +.++.++|+|||||++|+|++ |..||....... .....
T Consensus 147 ~~~~~~~----------~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~--~~~~~---- 210 (254)
T cd05083 147 ARVGSMG----------VDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKE--VKECV---- 210 (254)
T ss_pred ceecccc----------CCCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHH--HHHHH----
Confidence 8753110 01122456799999965 458899999999999999998 999986542211 11110
Q ss_pred ChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHHHHHH
Q 005045 625 PDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVNNLKT 704 (717)
Q Consensus 625 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~~l~~ 704 (717)
....... ....++..+.+++.+||+.+|++||+++++++.+++
T Consensus 211 --------~~~~~~~-----------------------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 211 --------EKGYRME-----------------------------PPEGCPADVYVLMTSCWETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred --------hCCCCCC-----------------------------CCCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence 0000000 011235667899999999999999999999998753
No 273
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=4.6e-34 Score=290.40 Aligned_cols=253 Identities=26% Similarity=0.389 Sum_probs=197.4
Q ss_pred cccccccccCcccccceEEEEeC-CCchhhhHHhHhhh-hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceEE
Q 005045 389 DNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQ-QGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFKA 466 (717)
Q Consensus 389 ~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~ 466 (717)
++|+..+.||.|++|.||+|.++ +++.+++|.+.... ......+.+|+++++++.||||+++++.+. .....+
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~-----~~~~~~ 75 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFY-----NNGDIS 75 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeee-----cCCEEE
Confidence 47889999999999999999965 78899999886542 344567889999999999999999998853 346899
Q ss_pred EEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHh-cCCCCeeecCCCCCCEEeCCCCceEEeeec
Q 005045 467 LVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHH-HCDTPIAHCDLKPSNVLLDKDMTAHVGDFG 545 (717)
Q Consensus 467 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~-~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg 545 (717)
+++||+++++|.+++.... ..+++..+..++.|++.|++|+|+ . +++||||+|+||+++.++.++|+|||
T Consensus 76 lv~e~~~~~~L~~~~~~~~------~~~~~~~~~~~~~~l~~~l~~lH~~~---~i~H~dl~~~ni~~~~~~~~~l~d~g 146 (265)
T cd06605 76 ICMEYMDGGSLDKILKEVQ------GRIPERILGKIAVAVLKGLTYLHEKH---KIIHRDVKPSNILVNSRGQIKLCDFG 146 (265)
T ss_pred EEEEecCCCcHHHHHHHcc------CCCCHHHHHHHHHHHHHHHHHHcCCC---CeecCCCCHHHEEECCCCCEEEeecc
Confidence 9999999999999987542 468889999999999999999999 7 99999999999999999999999999
Q ss_pred cchhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHHHhcC
Q 005045 546 LAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVSMAL 624 (717)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~ 624 (717)
.+....... .....++..|+|||.+.+ .++.++|||||||++|+|++|..||..............
T Consensus 147 ~~~~~~~~~---------~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~---- 213 (265)
T cd06605 147 VSGQLVNSL---------AKTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELL---- 213 (265)
T ss_pred cchhhHHHH---------hhcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHH----
Confidence 987652111 111457888999999655 488999999999999999999999976532111111111
Q ss_pred ChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHHH
Q 005045 625 PDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVNN 701 (717)
Q Consensus 625 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~~ 701 (717)
........+..+ ...++..+.+++.+||..+|++|||+.|++..
T Consensus 214 ----~~~~~~~~~~~~-----------------------------~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 257 (265)
T cd06605 214 ----QYIVNEPPPRLP-----------------------------SGKFSPDFQDFVNLCLIKDPRERPSYKELLEH 257 (265)
T ss_pred ----HHHhcCCCCCCC-----------------------------hhhcCHHHHHHHHHHcCCCchhCcCHHHHhhC
Confidence 111111000000 01135668899999999999999999999853
No 274
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-33 Score=279.64 Aligned_cols=203 Identities=27% Similarity=0.397 Sum_probs=174.4
Q ss_pred ccccccccccccCcccccceEEEEeC-CCchhhhHHhHhhh---hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCC
Q 005045 386 KSTDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQ---QGALKSFIDECNALKSTRHRNILRVITACSSVDLEG 461 (717)
Q Consensus 386 ~~~~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~ 461 (717)
..-+.|+.-+++|+||||.||.++.+ +|+.+|.|.+.... ........+|.+++++++.+.||.+..+ ++.
T Consensus 182 vt~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYA-----feT 256 (591)
T KOG0986|consen 182 VTKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYA-----FET 256 (591)
T ss_pred ccccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeee-----ecC
Confidence 34557788899999999999999944 89999999987553 3334667889999999999999998777 667
Q ss_pred CceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEE
Q 005045 462 NDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHV 541 (717)
Q Consensus 462 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl 541 (717)
.+.+|+|+..|.||+|.-.+..... +.+++..++.+|.+|+-||.+||.. .||.||+||+||++|+.|+++|
T Consensus 257 kd~LClVLtlMNGGDLkfHiyn~g~-----~gF~e~ra~FYAAEi~cGLehlH~~---~iVYRDLKPeNILLDd~GhvRI 328 (591)
T KOG0986|consen 257 KDALCLVLTLMNGGDLKFHIYNHGN-----PGFDEQRARFYAAEIICGLEHLHRR---RIVYRDLKPENILLDDHGHVRI 328 (591)
T ss_pred CCceEEEEEeecCCceeEEeeccCC-----CCCchHHHHHHHHHHHhhHHHHHhc---ceeeccCChhheeeccCCCeEe
Confidence 7799999999999999988876543 6799999999999999999999998 9999999999999999999999
Q ss_pred eeeccchhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHhCCCCCCCC
Q 005045 542 GDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRPTGDM 609 (717)
Q Consensus 542 ~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~ 609 (717)
+|+|+|+.+.+ .....+..||.+|||||++.+ .|+...|+||+||++|||+.|+.||...
T Consensus 329 SDLGLAvei~~--------g~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~ 389 (591)
T KOG0986|consen 329 SDLGLAVEIPE--------GKPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQR 389 (591)
T ss_pred eccceEEecCC--------CCccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhh
Confidence 99999997621 112233479999999999654 5999999999999999999999999653
No 275
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=1.7e-34 Score=303.13 Aligned_cols=191 Identities=29% Similarity=0.376 Sum_probs=156.9
Q ss_pred cCcccccceEEEEeC-CCchhhhHHhHhhh---hhHHHHHHHHHHHHhcC---CCCceeEEEEeeccccCCCCceEEEEE
Q 005045 397 IGTGSFGSVYKGTLG-DGTIVAIKVLKLQQ---QGALKSFIDECNALKST---RHRNILRVITACSSVDLEGNDFKALVF 469 (717)
Q Consensus 397 ig~g~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l---~h~ni~~~~~~~~~~~~~~~~~~~lv~ 469 (717)
||+|+||.||+|+++ +++.||+|++.... .........|..++... .||+|+++++.+ ......|+||
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~-----~~~~~~~lv~ 75 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSF-----QTDSDLYLVT 75 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEE-----ecCCeEEEEE
Confidence 699999999999965 78999999886432 22234455666776665 699999999884 4456899999
Q ss_pred ecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeeccchh
Q 005045 470 EFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKF 549 (717)
Q Consensus 470 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~ 549 (717)
||+++++|.+++... ..+++..+..++.||+.||+|||+. +|+||||||+||+++.++.++|+|||.+..
T Consensus 76 e~~~~g~L~~~l~~~-------~~~~~~~~~~~~~qil~al~~LH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~ 145 (330)
T cd05586 76 DYMSGGELFWHLQKE-------GRFSEDRAKFYIAELVLALEHLHKY---DIVYRDLKPENILLDATGHIALCDFGLSKA 145 (330)
T ss_pred cCCCCChHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEecCCcCcC
Confidence 999999999988754 5689999999999999999999998 999999999999999999999999999875
Q ss_pred cccccCCCCCCcceeecccccccccCCCccCC--CCCcccchhhHHHHHHHHHhCCCCCCCC
Q 005045 550 LFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG--QVSILGDIYSYGILLLEMFTGKRPTGDM 609 (717)
Q Consensus 550 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~sDvwslG~vl~elltg~~p~~~~ 609 (717)
... .........|+..|+|||++.+ .++.++|||||||++|+|++|..||...
T Consensus 146 ~~~-------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~ 200 (330)
T cd05586 146 NLT-------DNKTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAE 200 (330)
T ss_pred CCC-------CCCCccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCC
Confidence 311 1111223568999999999754 3789999999999999999999999653
No 276
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=1.3e-33 Score=286.98 Aligned_cols=253 Identities=24% Similarity=0.319 Sum_probs=196.4
Q ss_pred ccccccccCcccccceEEEEeC-CCchhhhHHhHhh--hhhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceEE
Q 005045 390 NFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQ--QQGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFKA 466 (717)
Q Consensus 390 ~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~ 466 (717)
+|++.+.+|.|++|.||+|.+. +++.||+|.+... .....+.+..|+++++.++|+||+++++.+.. ......+
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~---~~~~~~~ 77 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIID---RSNQTLY 77 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeec---CCCCEEE
Confidence 5889999999999999999954 7888999988643 23345678899999999999999999987532 2345789
Q ss_pred EEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHH-----hcCCCCeeecCCCCCCEEeCCCCceEE
Q 005045 467 LVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLH-----HHCDTPIAHCDLKPSNVLLDKDMTAHV 541 (717)
Q Consensus 467 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH-----~~~~~~ivH~dlkp~NIll~~~~~~kl 541 (717)
++|||+++++|.+++..... ....+++..++.++.||+.|++||| +. +++||||+|+||+++.++.+||
T Consensus 78 ~~~e~~~~~~L~~~l~~~~~---~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~---~i~h~dl~p~nili~~~~~~kl 151 (265)
T cd08217 78 IVMEYCEGGDLAQLIQKCKK---ERKYIEEEFIWRILTQLLLALYECHNRSDPGN---TVLHRDLKPANIFLDANNNVKL 151 (265)
T ss_pred EEehhccCCCHHHHHHHHhh---cccCCCHHHHHHHHHHHHHHHHHHhcCccccC---cceecCCCHHHEEEecCCCEEE
Confidence 99999999999999864321 1256899999999999999999999 65 9999999999999999999999
Q ss_pred eeeccchhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHH
Q 005045 542 GDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFV 620 (717)
Q Consensus 542 ~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~ 620 (717)
+|||.+...... ........++..|+|||.+.+ .++.++|+||||+++|+|++|..||..... .......
T Consensus 152 ~d~g~~~~~~~~-------~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~--~~~~~~~ 222 (265)
T cd08217 152 GDFGLAKILGHD-------SSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQ--LQLASKI 222 (265)
T ss_pred ecccccccccCC-------cccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCH--HHHHHHH
Confidence 999998865211 111223458889999999654 478999999999999999999999975431 1111111
Q ss_pred HhcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHH
Q 005045 621 SMALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVN 700 (717)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~ 700 (717)
.. ..... .+...+..+.+++.+|++.+|++|||++||++
T Consensus 223 ~~-----------~~~~~------------------------------~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~ 261 (265)
T cd08217 223 KE-----------GKFRR------------------------------IPYRYSSELNEVIKSMLNVDPDKRPSTEELLQ 261 (265)
T ss_pred hc-----------CCCCC------------------------------CccccCHHHHHHHHHHccCCcccCCCHHHHhh
Confidence 00 00000 11123567889999999999999999999986
Q ss_pred H
Q 005045 701 N 701 (717)
Q Consensus 701 ~ 701 (717)
.
T Consensus 262 ~ 262 (265)
T cd08217 262 L 262 (265)
T ss_pred C
Confidence 3
No 277
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=2e-33 Score=288.98 Aligned_cols=262 Identities=23% Similarity=0.319 Sum_probs=195.9
Q ss_pred cccccccccCcccccceEEEEeC-CCchhhhHHhHhhh-hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceEE
Q 005045 389 DNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQ-QGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFKA 466 (717)
Q Consensus 389 ~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~ 466 (717)
++|+..+.||.|++|.||.|..+ +++.+|+|.+.... ......+.+|++++++++||||+++++++.. ...+..+
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~---~~~~~~~ 77 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLD---ESSSSIG 77 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEc---cCCCeEE
Confidence 47889999999999999999965 78899999887543 2345678899999999999999999988643 2345789
Q ss_pred EEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeecc
Q 005045 467 LVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGL 546 (717)
Q Consensus 467 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~ 546 (717)
+||||+++++|.+++..... ....++...+..++.||+.||+|||+. +++|+||+|+||+++.++.++|+|||.
T Consensus 78 lv~e~~~~~~L~~~l~~~~~---~~~~l~~~~~~~i~~~i~~~L~~lH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~ 151 (287)
T cd06621 78 IAMEYCEGGSLDSIYKKVKK---RGGRIGEKVLGKIAESVLKGLSYLHSR---KIIHRDIKPSNILLTRKGQVKLCDFGV 151 (287)
T ss_pred EEEEecCCCCHHHHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecCCeEEEeeccc
Confidence 99999999999988653211 114578899999999999999999997 999999999999999999999999999
Q ss_pred chhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHHHhcCC
Q 005045 547 AKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVSMALP 625 (717)
Q Consensus 547 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 625 (717)
+...... ......++..|+|||.+.+ .++.++|||||||++|+|++|..||................
T Consensus 152 ~~~~~~~---------~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~--- 219 (287)
T cd06621 152 SGELVNS---------LAGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSY--- 219 (287)
T ss_pred ccccccc---------ccccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHH---
Confidence 8754211 1112446788999999654 58999999999999999999999997653211110000000
Q ss_pred hhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHH
Q 005045 626 DHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVN 700 (717)
Q Consensus 626 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~ 700 (717)
+...-.+.+.... ......+..+.+++.+||+.+|++|||+.|+++
T Consensus 220 --~~~~~~~~~~~~~---------------------------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~ 265 (287)
T cd06621 220 --IVNMPNPELKDEP---------------------------GNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLE 265 (287)
T ss_pred --HhcCCchhhccCC---------------------------CCCCchHHHHHHHHHHHcCCCcccCCCHHHHHh
Confidence 0000000000000 000112456789999999999999999999997
No 278
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-35 Score=325.40 Aligned_cols=255 Identities=26% Similarity=0.396 Sum_probs=203.4
Q ss_pred cccccccccccCcccccceEEEE-eCCCchhhhHHhHhhh--hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCc
Q 005045 387 STDNFSKENLIGTGSFGSVYKGT-LGDGTIVAIKVLKLQQ--QGALKSFIDECNALKSTRHRNILRVITACSSVDLEGND 463 (717)
Q Consensus 387 ~~~~y~~~~~ig~g~~g~v~~~~-~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~ 463 (717)
..-+|+...+||.|.||.||.|. ..+|+..|+|.+...+ ....+...+|..++..++|||+|++|++-. +.+
T Consensus 1233 V~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEv-----HRe 1307 (1509)
T KOG4645|consen 1233 VTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEV-----HRE 1307 (1509)
T ss_pred ceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceee-----cHH
Confidence 34578889999999999999999 4589999999998654 334566789999999999999999999843 445
Q ss_pred eEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEee
Q 005045 464 FKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGD 543 (717)
Q Consensus 464 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~D 543 (717)
..+|.||||.+|+|.+.+..+ ...++....-+..|++.|++|||++ |||||||||.||+++.+|.+|++|
T Consensus 1308 kv~IFMEyC~~GsLa~ll~~g-------ri~dE~vt~vyt~qll~gla~LH~~---gIVHRDIK~aNI~Ld~~g~iK~~D 1377 (1509)
T KOG4645|consen 1308 KVYIFMEYCEGGSLASLLEHG-------RIEDEMVTRVYTKQLLEGLAYLHEH---GIVHRDIKPANILLDFNGLIKYGD 1377 (1509)
T ss_pred HHHHHHHHhccCcHHHHHHhc-------chhhhhHHHHHHHHHHHHHHHHHhc---CceecCCCccceeeecCCcEEeec
Confidence 789999999999999999866 4567777778899999999999998 999999999999999999999999
Q ss_pred eccchhcccccCCCCCCcceeecccccccccCCCccCCC----CCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHH
Q 005045 544 FGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNGQ----VSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMF 619 (717)
Q Consensus 544 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~----~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~ 619 (717)
||.|..+.... ....+.-....||+.|||||++.|- ..-++||||+|||+.||.||+.||...+.+- .+.++
T Consensus 1378 FGsa~ki~~~~---~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~-aIMy~ 1453 (1509)
T KOG4645|consen 1378 FGSAVKIKNNA---QTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEW-AIMYH 1453 (1509)
T ss_pred ccceeEecCch---hcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchh-HHHhH
Confidence 99999874432 1222333467899999999998662 5789999999999999999999998764442 33333
Q ss_pred HHhcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHH
Q 005045 620 VSMALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVV 699 (717)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil 699 (717)
+.....+++. +..+.+=.+|+.+|++.||..|.++.|++
T Consensus 1454 V~~gh~Pq~P-----------------------------------------~~ls~~g~dFle~Cl~~dP~~Rw~~~qll 1492 (1509)
T KOG4645|consen 1454 VAAGHKPQIP-----------------------------------------ERLSSEGRDFLEHCLEQDPKMRWTASQLL 1492 (1509)
T ss_pred HhccCCCCCc-----------------------------------------hhhhHhHHHHHHHHHhcCchhhhHHHHHH
Confidence 3332211111 11133446799999999999999998877
Q ss_pred HH
Q 005045 700 NN 701 (717)
Q Consensus 700 ~~ 701 (717)
+.
T Consensus 1493 e~ 1494 (1509)
T KOG4645|consen 1493 EH 1494 (1509)
T ss_pred Hh
Confidence 53
No 279
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=8.4e-34 Score=286.83 Aligned_cols=247 Identities=24% Similarity=0.370 Sum_probs=193.6
Q ss_pred ccccccccCcccccceEEEEeC-CCchhhhHHhHhh--hhhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceEE
Q 005045 390 NFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQ--QQGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFKA 466 (717)
Q Consensus 390 ~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~ 466 (717)
+|+..+.||+|++|.||.|... +++.+|+|.+... .......+.+|++++++++|||++++++.+ ..++..+
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~-----~~~~~~~ 75 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENF-----LEDKALM 75 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeE-----ecCCEEE
Confidence 5899999999999999999964 7888999988643 233457788999999999999999999884 4456899
Q ss_pred EEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCC-CceEEeeec
Q 005045 467 LVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKD-MTAHVGDFG 545 (717)
Q Consensus 467 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~-~~~kl~Dfg 545 (717)
+||||+++++|.+++..... ..+++..+..++.+++.|++|||++ +++||||+|+||+++.+ +.+||+|||
T Consensus 76 lv~e~~~~~~L~~~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~~l~d~~ 147 (256)
T cd08220 76 IVMEYAPGGTLAEYIQKRCN-----SLLDEDTILHFFVQILLALHHVHTK---LILHRDLKTQNILLDKHKMVVKIGDFG 147 (256)
T ss_pred EEEecCCCCCHHHHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEccCC
Confidence 99999999999999975421 4579999999999999999999998 99999999999999855 468999999
Q ss_pred cchhcccccCCCCCCcceeecccccccccCCCccCCC-CCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHHHhcC
Q 005045 546 LAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNGQ-VSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVSMAL 624 (717)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~ 624 (717)
.+...... .......++..|+|||.+.+. ++.++||||||+++|+|++|..||....... .....
T Consensus 148 ~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~--~~~~~---- 213 (256)
T cd08220 148 ISKILSSK--------SKAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPA--LVLKI---- 213 (256)
T ss_pred CceecCCC--------ccccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHH--HHHHH----
Confidence 98765211 111234578899999997654 7899999999999999999999986542211 10000
Q ss_pred ChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHH
Q 005045 625 PDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVN 700 (717)
Q Consensus 625 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~ 700 (717)
...... +.+..++..+.+++.+||+.+|++|||+.|+++
T Consensus 214 -------~~~~~~------------------------------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~ 252 (256)
T cd08220 214 -------MSGTFA------------------------------PISDRYSPDLRQLILSMLNLDPSKRPQLSQIMA 252 (256)
T ss_pred -------HhcCCC------------------------------CCCCCcCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 000000 001122556789999999999999999999986
No 280
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=4.2e-34 Score=294.88 Aligned_cols=201 Identities=28% Similarity=0.436 Sum_probs=165.9
Q ss_pred ccccccccccCcccccceEEEEeC-CCchhhhHHhHhhh-hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceE
Q 005045 388 TDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQ-QGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFK 465 (717)
Q Consensus 388 ~~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~ 465 (717)
.++|++.+.||+|++|.||+|..+ +++.||+|.+.... ......+.+|++++++++|+||+++++++ ...+..
T Consensus 4 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-----~~~~~~ 78 (291)
T cd07844 4 LETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDII-----HTKKTL 78 (291)
T ss_pred ccceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEE-----ecCCeE
Confidence 468999999999999999999965 78899999986442 22234567899999999999999999984 445689
Q ss_pred EEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeec
Q 005045 466 ALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFG 545 (717)
Q Consensus 466 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg 545 (717)
++||||++ ++|.+++.... ..+++..++.++.|++.||.|||+. +++||||+|+||+++.++.+||+|||
T Consensus 79 ~lv~e~~~-~~L~~~~~~~~------~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg 148 (291)
T cd07844 79 TLVFEYLD-TDLKQYMDDCG------GGLSMHNVRLFLFQLLRGLAYCHQR---RVLHRDLKPQNLLISERGELKLADFG 148 (291)
T ss_pred EEEEecCC-CCHHHHHHhCC------CCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCHHHEEEcCCCCEEECccc
Confidence 99999997 58999886542 4578999999999999999999998 99999999999999999999999999
Q ss_pred cchhcccccCCCCCCcceeecccccccccCCCccCC--CCCcccchhhHHHHHHHHHhCCCCCCCCC
Q 005045 546 LAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG--QVSILGDIYSYGILLLEMFTGKRPTGDMF 610 (717)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~sDvwslG~vl~elltg~~p~~~~~ 610 (717)
.+...... ........++..|+|||++.+ .++.++||||+||++|+|++|..||....
T Consensus 149 ~~~~~~~~-------~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~ 208 (291)
T cd07844 149 LARAKSVP-------SKTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGST 208 (291)
T ss_pred cccccCCC-------CccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCc
Confidence 98753111 011112235788999999654 37889999999999999999999996543
No 281
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=2.3e-33 Score=286.44 Aligned_cols=254 Identities=25% Similarity=0.405 Sum_probs=192.9
Q ss_pred ccccccccCcccccceEEEEeC-CCchhhhHHhHhhh----------hhHHHHHHHHHHHHhcCCCCceeEEEEeecccc
Q 005045 390 NFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQ----------QGALKSFIDECNALKSTRHRNILRVITACSSVD 458 (717)
Q Consensus 390 ~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~----------~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~ 458 (717)
+|.+.+.||.|++|.||.|... +++.+|+|.+.... ....+.+..|+.+++.++|||++++++.+.
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--- 78 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFET--- 78 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEec---
Confidence 5888999999999999999854 78899999875321 112356788999999999999999999853
Q ss_pred CCCCceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCc
Q 005045 459 LEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMT 538 (717)
Q Consensus 459 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~ 538 (717)
..+..++||||+++++|.+++... ..+++..+..++.||+.|+.|||+. +++||||+|+||+++.++.
T Consensus 79 --~~~~~~lv~e~~~~~~L~~~l~~~-------~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~~~nil~~~~~~ 146 (272)
T cd06629 79 --TEEYLSIFLEYVPGGSIGSCLRTY-------GRFEEQLVRFFTEQVLEGLAYLHSK---GILHRDLKADNLLVDADGI 146 (272)
T ss_pred --cCCceEEEEecCCCCcHHHHHhhc-------cCCCHHHHHHHHHHHHHHHHHHhhC---CeeecCCChhhEEEcCCCe
Confidence 445889999999999999998754 4688899999999999999999997 9999999999999999999
Q ss_pred eEEeeeccchhcccccCCCCCCcceeecccccccccCCCccCC---CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchh
Q 005045 539 AHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG---QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFS 615 (717)
Q Consensus 539 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~---~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~ 615 (717)
++++|||.+....... .........++..|+|||...+ .++.++|+||||+++|++++|..||....... .
T Consensus 147 ~~l~d~~~~~~~~~~~-----~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~-~ 220 (272)
T cd06629 147 CKISDFGISKKSDDIY-----DNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIA-A 220 (272)
T ss_pred EEEeeccccccccccc-----cccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHH-H
Confidence 9999999987542110 1111223457889999999654 26899999999999999999999985432111 0
Q ss_pred hhHHHHhcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCH
Q 005045 616 IHMFVSMALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAM 695 (717)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~ 695 (717)
........ ....+... ...+++..+.+++.+||+.+|++|||+
T Consensus 221 ~~~~~~~~----~~~~~~~~---------------------------------~~~~~~~~~~~li~~~l~~~p~~Rps~ 263 (272)
T cd06629 221 MFKLGNKR----SAPPIPPD---------------------------------VSMNLSPVALDFLNACFTINPDNRPTA 263 (272)
T ss_pred HHHhhccc----cCCcCCcc---------------------------------ccccCCHHHHHHHHHHhcCChhhCCCH
Confidence 00000000 00000000 001225678889999999999999999
Q ss_pred HHHHHH
Q 005045 696 NVVVNN 701 (717)
Q Consensus 696 ~eil~~ 701 (717)
+||++.
T Consensus 264 ~~il~~ 269 (272)
T cd06629 264 RELLQH 269 (272)
T ss_pred HHHhhC
Confidence 999863
No 282
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=1.6e-33 Score=285.27 Aligned_cols=237 Identities=24% Similarity=0.445 Sum_probs=183.8
Q ss_pred cccCcccccceEEEEeCC-C----------chhhhHHhHhhhhhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCc
Q 005045 395 NLIGTGSFGSVYKGTLGD-G----------TIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRVITACSSVDLEGND 463 (717)
Q Consensus 395 ~~ig~g~~g~v~~~~~~~-~----------~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~ 463 (717)
+.||+|+||.||+|.++. + ..+++|.+...... ...+.+|+.+++.++||||+++++.+.. .
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~------~ 73 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR------D 73 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec------C
Confidence 468999999999999753 3 24777876654433 5788899999999999999999998643 3
Q ss_pred eEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCC------
Q 005045 464 FKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDM------ 537 (717)
Q Consensus 464 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~------ 537 (717)
..++||||+++++|.+++.... ..+++..+..++.||+.||+|||+. +++||||||+||+++.++
T Consensus 74 ~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dlkp~Nill~~~~~~~~~~ 144 (259)
T cd05037 74 ENIMVEEYVKFGPLDVFLHREK------NNVSLHWKLDVAKQLASALHYLEDK---KLVHGNVCGKNILVARYGLNEGYV 144 (259)
T ss_pred CcEEEEEcCCCCcHHHHHHhhc------cCCCHHHHHHHHHHHHHHHHHHhhC---CeecccCccceEEEecCccccCCc
Confidence 5699999999999999987652 3688999999999999999999997 999999999999999887
Q ss_pred -ceEEeeeccchhcccccCCCCCCcceeecccccccccCCCccCC---CCCcccchhhHHHHHHHHHh-CCCCCCCCCCC
Q 005045 538 -TAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG---QVSILGDIYSYGILLLEMFT-GKRPTGDMFKD 612 (717)
Q Consensus 538 -~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~---~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~ 612 (717)
.+||+|||.+..... .....++..|+|||++.+ .++.++|||||||++|+|++ |..||......
T Consensus 145 ~~~kl~Dfg~a~~~~~-----------~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~ 213 (259)
T cd05037 145 PFIKLSDPGIPITVLS-----------REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSS 213 (259)
T ss_pred eeEEeCCCCccccccc-----------ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCch
Confidence 799999999886421 112346678999999755 47899999999999999999 57777654321
Q ss_pred chhhhHHHHhcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCC
Q 005045 613 DFSIHMFVSMALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRER 692 (717)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~R 692 (717)
.. ..... .....+... ...+.+++.+||+.+|++|
T Consensus 214 ~~--~~~~~----------~~~~~~~~~---------------------------------~~~~~~li~~~l~~~p~~R 248 (259)
T cd05037 214 EK--ERFYQ----------DQHRLPMPD---------------------------------CAELANLINQCWTYDPTKR 248 (259)
T ss_pred hH--HHHHh----------cCCCCCCCC---------------------------------chHHHHHHHHHhccChhhC
Confidence 11 00000 000000000 1457889999999999999
Q ss_pred CCHHHHHHHHH
Q 005045 693 IAMNVVVNNLK 703 (717)
Q Consensus 693 ps~~eil~~l~ 703 (717)
||+.||++.|+
T Consensus 249 pt~~~il~~l~ 259 (259)
T cd05037 249 PSFRAILRDLN 259 (259)
T ss_pred CCHHHHHHhcC
Confidence 99999998763
No 283
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=1.5e-33 Score=294.36 Aligned_cols=257 Identities=27% Similarity=0.358 Sum_probs=196.7
Q ss_pred cccccccccCcccccceEEEEeC-CCchhhhHHhHhhh---hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCce
Q 005045 389 DNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQ---QGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDF 464 (717)
Q Consensus 389 ~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 464 (717)
++|++.+.||+|++|.||.|... +++.||+|.+.... ....+.+..|+++++.++|+||+++++.+ ...+.
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~~~ 75 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASF-----QTETY 75 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeee-----ecCCE
Confidence 47899999999999999999965 68999999887543 22456788999999999999999999884 44568
Q ss_pred EEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeee
Q 005045 465 KALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDF 544 (717)
Q Consensus 465 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Df 544 (717)
.++||||+.+++|.+++..... ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.++|+||
T Consensus 76 ~~lv~e~~~~~~L~~~~~~~~~-----~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~df 147 (316)
T cd05574 76 LCLVMDYCPGGELFRLLQRQPG-----KCLSEEVARFYAAEVLLALEYLHLL---GIVYRDLKPENILLHESGHIMLSDF 147 (316)
T ss_pred EEEEEEecCCCCHHHHHHhCCC-----CccCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChHHeEEcCCCCEEEeec
Confidence 9999999999999999875421 5689999999999999999999998 9999999999999999999999999
Q ss_pred ccchhcccccCCCCC----------------------CcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHh
Q 005045 545 GLAKFLFEISDNPSK----------------------NQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFT 601 (717)
Q Consensus 545 g~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~ellt 601 (717)
|.+............ .........|+..|+|||+..+ .++.++|||||||++|+|++
T Consensus 148 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~ 227 (316)
T cd05574 148 DLSKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLY 227 (316)
T ss_pred chhhcccccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhh
Confidence 998754221110000 0001113457889999999655 47899999999999999999
Q ss_pred CCCCCCCCCCCchhhhHHHHhcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHh
Q 005045 602 GKRPTGDMFKDDFSIHMFVSMALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIG 681 (717)
Q Consensus 602 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 681 (717)
|..||........ +..+.+....... ....+..+.+++
T Consensus 228 g~~pf~~~~~~~~-------------~~~~~~~~~~~~~-----------------------------~~~~~~~~~~li 265 (316)
T cd05574 228 GTTPFKGSNRDET-------------FSNILKKEVTFPG-----------------------------SPPVSSSARDLI 265 (316)
T ss_pred CCCCCCCCchHHH-------------HHHHhcCCccCCC-----------------------------ccccCHHHHHHH
Confidence 9999975432210 1111111111000 001256788999
Q ss_pred hccCCCCcCCCCC----HHHHHH
Q 005045 682 LMCSTTSPRERIA----MNVVVN 700 (717)
Q Consensus 682 ~~cl~~~p~~Rps----~~eil~ 700 (717)
.+|++.+|++||| ++|+++
T Consensus 266 ~~~l~~~p~~R~s~~~~~~~ll~ 288 (316)
T cd05574 266 RKLLVKDPSKRLGSKRGAAEIKQ 288 (316)
T ss_pred HHHccCCHhHCCCchhhHHHHHc
Confidence 9999999999999 666665
No 284
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-34 Score=299.54 Aligned_cols=257 Identities=25% Similarity=0.397 Sum_probs=207.8
Q ss_pred ccccccccccCcccccceEEEEeC--CCc--hhhhHHhHhhhhh-HHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCC
Q 005045 388 TDNFSKENLIGTGSFGSVYKGTLG--DGT--IVAIKVLKLQQQG-ALKSFIDECNALKSTRHRNILRVITACSSVDLEGN 462 (717)
Q Consensus 388 ~~~y~~~~~ig~g~~g~v~~~~~~--~~~--~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~ 462 (717)
.+.....++||+|.||.||+|.|+ +|+ .||||.+...... ....|.+|+.+|.+++|+|++++|+...+
T Consensus 109 ee~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~------ 182 (1039)
T KOG0199|consen 109 EEQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD------ 182 (1039)
T ss_pred HHHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc------
Confidence 445567789999999999999975 455 4899999866543 67899999999999999999999999632
Q ss_pred ceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEe
Q 005045 463 DFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVG 542 (717)
Q Consensus 463 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~ 542 (717)
....+|||.++.|+|.+.+++.. ...+.....-.++.|||.||.||.+. ++||||+.++|+++...-.|||+
T Consensus 183 qp~mMV~ELaplGSLldrLrka~-----~~~llv~~Lcdya~QiA~aM~YLesk---rlvHRDLAARNlllasprtVKI~ 254 (1039)
T KOG0199|consen 183 QPAMMVFELAPLGSLLDRLRKAK-----KAILLVSRLCDYAMQIAKAMQYLESK---RLVHRDLAARNLLLASPRTVKIC 254 (1039)
T ss_pred chhhHHhhhcccchHHHHHhhcc-----ccceeHHHHHHHHHHHHHHHHHHhhh---hhhhhhhhhhhheecccceeeee
Confidence 35789999999999999998732 26788888999999999999999997 99999999999999999999999
Q ss_pred eeccchhcccccCCCCCCcceeecccccccccCCCccC-CCCCcccchhhHHHHHHHHHh-CCCCCCCCCCCchhhhHHH
Q 005045 543 DFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMN-GQVSILGDIYSYGILLLEMFT-GKRPTGDMFKDDFSIHMFV 620 (717)
Q Consensus 543 Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~ 620 (717)
|||+.+.+....+ .+.......-...|||||.++ ++++.++|||+|||+|||||| |+.||.+....
T Consensus 255 DFGLmRaLg~ned----~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~-------- 322 (1039)
T KOG0199|consen 255 DFGLMRALGENED----MYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGI-------- 322 (1039)
T ss_pred cccceeccCCCCc----ceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHH--------
Confidence 9999998743322 233334455677899999975 569999999999999999999 99999764221
Q ss_pred HhcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHH
Q 005045 621 SMALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVN 700 (717)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~ 700 (717)
.+.+.+|.... .+++..|++.+++++.+||..+|++|||+..|.+
T Consensus 323 ------qIL~~iD~~er-----------------------------LpRPk~csedIY~imk~cWah~paDRptFsair~ 367 (1039)
T KOG0199|consen 323 ------QILKNIDAGER-----------------------------LPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIRE 367 (1039)
T ss_pred ------HHHHhcccccc-----------------------------CCCCCCChHHHHHHHHHhccCCccccccHHHHHH
Confidence 12233332211 1256788999999999999999999999999986
Q ss_pred HHHHH
Q 005045 701 NLKTI 705 (717)
Q Consensus 701 ~l~~i 705 (717)
.+-..
T Consensus 368 ~~~l~ 372 (1039)
T KOG0199|consen 368 DLVLA 372 (1039)
T ss_pred hHHHH
Confidence 55443
No 285
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=1.6e-33 Score=290.49 Aligned_cols=202 Identities=28% Similarity=0.435 Sum_probs=165.5
Q ss_pred cccccccccccCcccccceEEEEeC-CCchhhhHHhHhhh-hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCce
Q 005045 387 STDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQ-QGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDF 464 (717)
Q Consensus 387 ~~~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 464 (717)
++++|++.+.||+|++|.||.|... +++.||+|.+.... ......+.+|+++++.++|+||+++.+++ ...+.
T Consensus 3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~-----~~~~~ 77 (291)
T cd07870 3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDII-----HTKET 77 (291)
T ss_pred ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEE-----ecCCe
Confidence 5678999999999999999999854 78899999986543 22334667899999999999999999985 34568
Q ss_pred EEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeee
Q 005045 465 KALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDF 544 (717)
Q Consensus 465 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Df 544 (717)
.++||||++ +++.+++.... ..+++..+..++.|++.||+|||+. +++|+||||+||+++.++.++|+||
T Consensus 78 ~~lv~e~~~-~~l~~~~~~~~------~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Df 147 (291)
T cd07870 78 LTFVFEYMH-TDLAQYMIQHP------GGLHPYNVRLFMFQLLRGLAYIHGQ---HILHRDLKPQNLLISYLGELKLADF 147 (291)
T ss_pred EEEEEeccc-CCHHHHHHhCC------CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEEcCCCcEEEecc
Confidence 999999995 67777765432 4567888999999999999999997 9999999999999999999999999
Q ss_pred ccchhcccccCCCCCCcceeecccccccccCCCccCC--CCCcccchhhHHHHHHHHHhCCCCCCCCC
Q 005045 545 GLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG--QVSILGDIYSYGILLLEMFTGKRPTGDMF 610 (717)
Q Consensus 545 g~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~sDvwslG~vl~elltg~~p~~~~~ 610 (717)
|.+....... .......++..|+|||.+.+ .++.++|||||||++|+|++|..||....
T Consensus 148 g~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~ 208 (291)
T cd07870 148 GLARAKSIPS-------QTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVS 208 (291)
T ss_pred ccccccCCCC-------CCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCch
Confidence 9987542111 11122346888999999754 47889999999999999999999997653
No 286
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.1e-33 Score=309.08 Aligned_cols=205 Identities=22% Similarity=0.336 Sum_probs=155.1
Q ss_pred cccccccccccCcccccceEEEEeC--CCchhhhH--------------HhHh---hhhhHHHHHHHHHHHHhcCCCCce
Q 005045 387 STDNFSKENLIGTGSFGSVYKGTLG--DGTIVAIK--------------VLKL---QQQGALKSFIDECNALKSTRHRNI 447 (717)
Q Consensus 387 ~~~~y~~~~~ig~g~~g~v~~~~~~--~~~~vavK--------------~~~~---~~~~~~~~~~~e~~~l~~l~h~ni 447 (717)
..++|+++++||+|+||.||+|..+ .+..++.| .+.. ........+.+|+.++++++||||
T Consensus 146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnI 225 (501)
T PHA03210 146 FLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENI 225 (501)
T ss_pred hhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCc
Confidence 4578999999999999999998743 22222222 1111 112334668899999999999999
Q ss_pred eEEEEeeccccCCCCceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCC
Q 005045 448 LRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLK 527 (717)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk 527 (717)
+++++++. ..+..|+|++++ ++++.+++...... .........++.++.||+.||+|||+. +|+|||||
T Consensus 226 v~l~~~~~-----~~~~~~lv~e~~-~~~l~~~l~~~~~~--~~~~~~~~~~~~i~~ql~~aL~yLH~~---gIiHrDLK 294 (501)
T PHA03210 226 LKIEEILR-----SEANTYMITQKY-DFDLYSFMYDEAFD--WKDRPLLKQTRAIMKQLLCAVEYIHDK---KLIHRDIK 294 (501)
T ss_pred CcEeEEEE-----ECCeeEEEEecc-ccCHHHHHhhcccc--ccccccHHHHHHHHHHHHHHHHHHHhC---CeecCCCC
Confidence 99999953 445789999998 46777776543211 012344667889999999999999997 99999999
Q ss_pred CCCEEeCCCCceEEeeeccchhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHhCCC-C
Q 005045 528 PSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKR-P 605 (717)
Q Consensus 528 p~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~elltg~~-p 605 (717)
|+||+++.++.+||+|||++..+... .........|+..|+|||++.+ .++.++|||||||++|||++|.. |
T Consensus 295 P~NILl~~~~~vkL~DFGla~~~~~~------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p 368 (501)
T PHA03210 295 LENIFLNCDGKIVLGDFGTAMPFEKE------REAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCP 368 (501)
T ss_pred HHHEEECCCCCEEEEeCCCceecCcc------cccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCC
Confidence 99999999999999999999765211 1111223568999999999765 48999999999999999999875 4
Q ss_pred CCC
Q 005045 606 TGD 608 (717)
Q Consensus 606 ~~~ 608 (717)
+..
T Consensus 369 ~~~ 371 (501)
T PHA03210 369 IGD 371 (501)
T ss_pred ccC
Confidence 443
No 287
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=1.7e-33 Score=285.93 Aligned_cols=251 Identities=27% Similarity=0.395 Sum_probs=199.4
Q ss_pred cccccccccCcccccceEEEEeC-CCchhhhHHhHhhhh-hHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceEE
Q 005045 389 DNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQQ-GALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFKA 466 (717)
Q Consensus 389 ~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~ 466 (717)
++|++.+.||+|++|.||+|..+ +++.|++|.+..... .....+.+|++.+++++|+|++++++.+. .....+
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~~~ 75 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFY-----KEGEIS 75 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-----cCCeEE
Confidence 47889999999999999999966 699999998876543 44578899999999999999999999953 446899
Q ss_pred EEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHh-cCCCCeeecCCCCCCEEeCCCCceEEeeec
Q 005045 467 LVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHH-HCDTPIAHCDLKPSNVLLDKDMTAHVGDFG 545 (717)
Q Consensus 467 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~-~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg 545 (717)
+||||+++++|.+++... ..+++..+..++.|++.|++|+|+ . +++||||+|+||+++.++.++|+|||
T Consensus 76 lv~e~~~~~~L~~~l~~~-------~~l~~~~~~~~~~~l~~~l~~lh~~~---~~~H~~l~~~ni~~~~~~~~~l~df~ 145 (264)
T cd06623 76 IVLEYMDGGSLADLLKKV-------GKIPEPVLAYIARQILKGLDYLHTKR---HIIHRDIKPSNLLINSKGEVKIADFG 145 (264)
T ss_pred EEEEecCCCcHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHhccC---CCccCCCCHHHEEECCCCCEEEccCc
Confidence 999999999999999754 568999999999999999999999 8 99999999999999999999999999
Q ss_pred cchhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHHHhcC
Q 005045 546 LAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVSMAL 624 (717)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~ 624 (717)
.+....... .......++..|+|||.+.+ .++.++|+||||+++|+|++|..||........ ..
T Consensus 146 ~~~~~~~~~-------~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~--~~------ 210 (264)
T cd06623 146 ISKVLENTL-------DQCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSF--FE------ 210 (264)
T ss_pred cceecccCC-------CcccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCH--HH------
Confidence 987652211 11123457889999999655 478999999999999999999999976532110 00
Q ss_pred ChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHH-HHHHHHHHhhccCCCCcCCCCCHHHHHHH
Q 005045 625 PDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEE-CFVSVLRIGLMCSTTSPRERIAMNVVVNN 701 (717)
Q Consensus 625 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~li~~cl~~~p~~Rps~~eil~~ 701 (717)
....+....... .+.. ++..+.+++.+|+..+|++|||+.|+++.
T Consensus 211 --~~~~~~~~~~~~------------------------------~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~ 256 (264)
T cd06623 211 --LMQAICDGPPPS------------------------------LPAEEFSPEFRDFISACLQKDPKKRPSAAELLQH 256 (264)
T ss_pred --HHHHHhcCCCCC------------------------------CCcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 011111111100 0011 35678899999999999999999999874
No 288
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=1.7e-33 Score=289.25 Aligned_cols=199 Identities=29% Similarity=0.457 Sum_probs=164.9
Q ss_pred ccccccccCcccccceEEEEeC-CCchhhhHHhHhhh--hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceEE
Q 005045 390 NFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQ--QGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFKA 466 (717)
Q Consensus 390 ~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~ 466 (717)
+|++.+.||.|++|.||+|+.+ +++.||+|.+.... ......+.+|++++++++||||+++++++ .+.+..+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-----~~~~~~~ 75 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVI-----HTENKLY 75 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhc-----ccCCcEE
Confidence 5889999999999999999965 78899999886442 22345788999999999999999999984 4556899
Q ss_pred EEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeecc
Q 005045 467 LVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGL 546 (717)
Q Consensus 467 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~ 546 (717)
+||||++ +++.+++..... ..+++..+..++.|++.|++|||+. +++||||+|+||+++.++.+||+|||.
T Consensus 76 ~v~e~~~-~~l~~~~~~~~~-----~~l~~~~~~~~~~~i~~~l~~lh~~---~i~H~~l~p~nill~~~~~~~l~dfg~ 146 (284)
T cd07860 76 LVFEFLH-QDLKKFMDASPL-----SGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGL 146 (284)
T ss_pred EEeeccc-cCHHHHHHhCCC-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEeeccc
Confidence 9999995 689888865421 5689999999999999999999997 999999999999999999999999999
Q ss_pred chhcccccCCCCCCcceeecccccccccCCCccCC-C-CCcccchhhHHHHHHHHHhCCCCCCCC
Q 005045 547 AKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-Q-VSILGDIYSYGILLLEMFTGKRPTGDM 609 (717)
Q Consensus 547 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~-~~~~sDvwslG~vl~elltg~~p~~~~ 609 (717)
+...... ........++..|+|||.+.+ . ++.++|||||||++|+|+||..||...
T Consensus 147 ~~~~~~~-------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~ 204 (284)
T cd07860 147 ARAFGVP-------VRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 204 (284)
T ss_pred hhhcccC-------ccccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCC
Confidence 8754211 111122346788999998654 3 588999999999999999999999754
No 289
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=1.4e-33 Score=290.88 Aligned_cols=254 Identities=23% Similarity=0.311 Sum_probs=198.2
Q ss_pred ccccccccccccccCcccccceEEEEeC-CCchhhhHHhHhhhhhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCC
Q 005045 384 ISKSTDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRVITACSSVDLEGN 462 (717)
Q Consensus 384 ~~~~~~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~ 462 (717)
.....++|.+.+.+|+|++|.||++... +++.|++|.+........+.+.+|+.+++.++||||+++++.+. ..
T Consensus 14 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~-----~~ 88 (293)
T cd06647 14 VGDPKKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYL-----VG 88 (293)
T ss_pred ccCchhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheee-----eC
Confidence 3445689999999999999999999854 67889999987555445577889999999999999999998853 34
Q ss_pred ceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEe
Q 005045 463 DFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVG 542 (717)
Q Consensus 463 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~ 542 (717)
+..++|+||+++++|.+++... .+++..+..++.|++.|++|||+. +++||||+|+||+++.++.++|+
T Consensus 89 ~~~~lv~e~~~~~~L~~~~~~~--------~l~~~~~~~i~~~l~~al~~LH~~---gi~H~dL~p~Nili~~~~~~kL~ 157 (293)
T cd06647 89 DELWVVMEYLAGGSLTDVVTET--------CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLT 157 (293)
T ss_pred CcEEEEEecCCCCcHHHHHhhc--------CCCHHHHHHHHHHHHHHHHHHHhC---CEeeccCCHHHEEEcCCCCEEEc
Confidence 5889999999999999998642 468889999999999999999998 99999999999999999999999
Q ss_pred eeccchhcccccCCCCCCcceeecccccccccCCCccC-CCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHHH
Q 005045 543 DFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMN-GQVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVS 621 (717)
Q Consensus 543 Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~ 621 (717)
|||.+...... ........+++.|+|||.+. +.++.++|||||||++|++++|..||..........
T Consensus 158 dfg~~~~~~~~-------~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~----- 225 (293)
T cd06647 158 DFGFCAQITPE-------QSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALY----- 225 (293)
T ss_pred cCcceeccccc-------ccccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhhee-----
Confidence 99988654211 11112345788899999964 457899999999999999999999996542211100
Q ss_pred hcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHHH
Q 005045 622 MALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVNN 701 (717)
Q Consensus 622 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~~ 701 (717)
.......+. .......+..+.+++.+||+.+|++||++.|++..
T Consensus 226 --------~~~~~~~~~----------------------------~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h 269 (293)
T cd06647 226 --------LIATNGTPE----------------------------LQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 269 (293)
T ss_pred --------ehhcCCCCC----------------------------CCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000000000 00111124567889999999999999999999865
No 290
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=2.3e-33 Score=285.77 Aligned_cols=254 Identities=23% Similarity=0.378 Sum_probs=195.3
Q ss_pred ccccccccCcccccceEEEEe-CCCchhhhHHhHhhh------hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCC
Q 005045 390 NFSKENLIGTGSFGSVYKGTL-GDGTIVAIKVLKLQQ------QGALKSFIDECNALKSTRHRNILRVITACSSVDLEGN 462 (717)
Q Consensus 390 ~y~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~------~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~ 462 (717)
+|+..+.||+|++|.||.|.. .+++.||+|++.... ....+.+..|++++++++|+||+++++.+ .+.
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-----~~~ 75 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGAT-----CED 75 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhcee-----ccC
Confidence 588899999999999999995 478999999886432 22457789999999999999999999994 455
Q ss_pred ceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCC-ceEE
Q 005045 463 DFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDM-TAHV 541 (717)
Q Consensus 463 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~-~~kl 541 (717)
+..++||||+++++|.+++... ..+++..+..++.|++.|++|||+. +++|+||+|+||+++.++ .++|
T Consensus 76 ~~~~~v~e~~~~~~L~~~l~~~-------~~~~~~~~~~~~~ql~~al~~LH~~---~i~H~~i~~~nil~~~~~~~~~l 145 (268)
T cd06630 76 SHFNLFVEWMAGGSVSHLLSKY-------GAFKEAVIINYTEQLLRGLSYLHEN---QIIHRDVKGANLLIDSTGQRLRI 145 (268)
T ss_pred CeEEEEEeccCCCcHHHHHHHh-------CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEE
Confidence 6899999999999999998754 4678999999999999999999997 999999999999998776 6999
Q ss_pred eeeccchhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHH
Q 005045 542 GDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFV 620 (717)
Q Consensus 542 ~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~ 620 (717)
+|||.+.......... ........++..|+|||.+.+ .++.++||||+||++|+|++|..||.......... .
T Consensus 146 ~dfg~~~~~~~~~~~~---~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~--~- 219 (268)
T cd06630 146 ADFGAAARLAAKGTGA---GEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLA--L- 219 (268)
T ss_pred cccccccccccccccC---CccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHH--H-
Confidence 9999987763221111 111223457889999999654 47899999999999999999999986432111100 0
Q ss_pred HhcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHH
Q 005045 621 SMALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVN 700 (717)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~ 700 (717)
+........ ..+.+...+..+.+++.+|++.+|++|||+.|+++
T Consensus 220 -------~~~~~~~~~-----------------------------~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~ 263 (268)
T cd06630 220 -------IFKIASATT-----------------------------APSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLK 263 (268)
T ss_pred -------HHHHhccCC-----------------------------CCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhc
Confidence 000000000 00011233567889999999999999999999985
No 291
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=1.6e-33 Score=285.12 Aligned_cols=246 Identities=27% Similarity=0.396 Sum_probs=194.3
Q ss_pred ccccccccCcccccceEEEEeC-CCchhhhHHhHhhh-----hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCc
Q 005045 390 NFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQ-----QGALKSFIDECNALKSTRHRNILRVITACSSVDLEGND 463 (717)
Q Consensus 390 ~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~ 463 (717)
+|+..+.||+|++|.||.|..+ +++.|++|.+.... .+..+.+.+|+++++.++|+||+++++.+ ....
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~-----~~~~ 75 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTE-----REED 75 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeE-----ecCC
Confidence 5888899999999999999966 78999999876432 23456788999999999999999999985 3445
Q ss_pred eEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEee
Q 005045 464 FKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGD 543 (717)
Q Consensus 464 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~D 543 (717)
..+++|||+++++|.+++... ..+++..+..++.||+.|++|||+. +++|+||+|+||+++.++.+||+|
T Consensus 76 ~~~lv~e~~~~~~L~~~~~~~-------~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~~~ni~~~~~~~~kl~d 145 (258)
T cd06632 76 NLYIFLELVPGGSLAKLLKKY-------GSFPEPVIRLYTRQILLGLEYLHDR---NTVHRDIKGANILVDTNGVVKLAD 145 (258)
T ss_pred eEEEEEEecCCCcHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEcc
Confidence 899999999999999999754 4578999999999999999999998 999999999999999999999999
Q ss_pred eccchhcccccCCCCCCcceeecccccccccCCCccCC-C-CCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHHH
Q 005045 544 FGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-Q-VSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVS 621 (717)
Q Consensus 544 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~-~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~ 621 (717)
||.+....... ......++..|+|||.+.. . ++.++|+|||||++|+|++|..||........ .....
T Consensus 146 ~~~~~~~~~~~--------~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~--~~~~~ 215 (258)
T cd06632 146 FGMAKQVVEFS--------FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAA--VFKIG 215 (258)
T ss_pred Cccceeccccc--------cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHH--HHHHH
Confidence 99987652111 1223457888999999644 3 78999999999999999999999976431110 00000
Q ss_pred hcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHH
Q 005045 622 MALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVN 700 (717)
Q Consensus 622 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~ 700 (717)
. ....+. .++.++..+.+++.+||+.+|++||++.|+++
T Consensus 216 ~----------~~~~~~------------------------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 254 (258)
T cd06632 216 R----------SKELPP------------------------------IPDHLSDEAKDFILKCLQRDPSLRPTAAELLE 254 (258)
T ss_pred h----------cccCCC------------------------------cCCCcCHHHHHHHHHHhhcCcccCcCHHHHhc
Confidence 0 000000 01122456788999999999999999999985
No 292
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=6.5e-34 Score=293.07 Aligned_cols=250 Identities=22% Similarity=0.308 Sum_probs=194.3
Q ss_pred ccccccccccCcccccceEEEEeC-CCchhhhHHhHhhhhhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceEE
Q 005045 388 TDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFKA 466 (717)
Q Consensus 388 ~~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~ 466 (717)
.+.|.....||+|++|.||.+... +++.||+|.+........+.+.+|+.+++.++|+||+++++.+ ...+..+
T Consensus 21 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~-----~~~~~~~ 95 (292)
T cd06658 21 REYLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSY-----LVGDELW 95 (292)
T ss_pred HHHHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHhe-----ecCCeEE
Confidence 445666788999999999999964 7889999988655555567788999999999999999999884 3456899
Q ss_pred EEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeecc
Q 005045 467 LVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGL 546 (717)
Q Consensus 467 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~ 546 (717)
+||||+++++|.+++.. ..+++..+..++.||+.|++|||+. +++||||+|+||+++.++.++|+|||.
T Consensus 96 lv~e~~~~~~L~~~~~~--------~~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kL~dfg~ 164 (292)
T cd06658 96 VVMEFLEGGALTDIVTH--------TRMNEEQIATVCLSVLRALSYLHNQ---GVIHRDIKSDSILLTSDGRIKLSDFGF 164 (292)
T ss_pred EEEeCCCCCcHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEccCcc
Confidence 99999999999998853 3478899999999999999999997 999999999999999999999999999
Q ss_pred chhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHHHhcCC
Q 005045 547 AKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVSMALP 625 (717)
Q Consensus 547 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 625 (717)
+...... ........++..|+|||...+ .++.++|||||||++|||++|..||....... .....
T Consensus 165 ~~~~~~~-------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~--~~~~~----- 230 (292)
T cd06658 165 CAQVSKE-------VPKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQ--AMRRI----- 230 (292)
T ss_pred hhhcccc-------cccCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHH-----
Confidence 8754211 111123457889999999655 57899999999999999999999986532111 00000
Q ss_pred hhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHHH
Q 005045 626 DHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVNN 701 (717)
Q Consensus 626 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~~ 701 (717)
.....+.... ....+..+.+++.+|+..+|++|||++|+++.
T Consensus 231 ---~~~~~~~~~~-------------------------------~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 272 (292)
T cd06658 231 ---RDNLPPRVKD-------------------------------SHKVSSVLRGFLDLMLVREPSQRATAQELLQH 272 (292)
T ss_pred ---HhcCCCcccc-------------------------------ccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 0111111100 01124457789999999999999999999974
No 293
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=1.3e-33 Score=292.19 Aligned_cols=270 Identities=23% Similarity=0.279 Sum_probs=194.9
Q ss_pred ccccccccCcccccceEEEEeC-CCchhhhHHhHhhhh-----hHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCc
Q 005045 390 NFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQQ-----GALKSFIDECNALKSTRHRNILRVITACSSVDLEGND 463 (717)
Q Consensus 390 ~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~~-----~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~ 463 (717)
+|++.+.||+|++|.||+|.+. +++.||+|.+..... .....+..|++++++++|+||+++++++. +..
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-----~~~ 75 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFG-----HKS 75 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheee-----cCC
Confidence 5888999999999999999965 789999999875432 23456778999999999999999999853 356
Q ss_pred eEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEee
Q 005045 464 FKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGD 543 (717)
Q Consensus 464 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~D 543 (717)
..++||||+ +++|.+++.... ..+++..+..++.||++||+|||+. +++||||+|+||+++.++.++|+|
T Consensus 76 ~~~lv~e~~-~~~L~~~i~~~~------~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nill~~~~~~~l~d 145 (298)
T cd07841 76 NINLVFEFM-ETDLEKVIKDKS------IVLTPADIKSYMLMTLRGLEYLHSN---WILHRDLKPNNLLIASDGVLKLAD 145 (298)
T ss_pred EEEEEEccc-CCCHHHHHhccC------CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCChhhEEEcCCCCEEEcc
Confidence 899999999 899999997542 3689999999999999999999998 999999999999999999999999
Q ss_pred eccchhcccccCCCCCCcceeecccccccccCCCccCC--CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHHH
Q 005045 544 FGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG--QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVS 621 (717)
Q Consensus 544 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~ 621 (717)
||.+....... .......++..|+|||.+.+ .++.++|||||||++|+|++|..||....+.+. . ....
T Consensus 146 fg~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~-~-~~~~ 216 (298)
T cd07841 146 FGLARSFGSPN-------RKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQ-L-GKIF 216 (298)
T ss_pred ceeeeeccCCC-------ccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHH-H-HHHH
Confidence 99987652211 11122346778999999643 478999999999999999999777765332111 1 1111
Q ss_pred hcCC----hhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHH
Q 005045 622 MALP----DHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNV 697 (717)
Q Consensus 622 ~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~e 697 (717)
..+. ............... .... ...........+..+.+++.+||+++|++|||++|
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~--~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e 278 (298)
T cd07841 217 EALGTPTEENWPGVTSLPDYVEF----------------KPFP--PTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQ 278 (298)
T ss_pred HHcCCCchhhhhhcccccccccc----------------cccC--CcchhhhcccccHHHHHHHHHHhcCCcccCcCHHH
Confidence 1000 000000000000000 0000 00000011223567889999999999999999999
Q ss_pred HHHH
Q 005045 698 VVNN 701 (717)
Q Consensus 698 il~~ 701 (717)
+++.
T Consensus 279 ~l~~ 282 (298)
T cd07841 279 ALEH 282 (298)
T ss_pred HhhC
Confidence 9873
No 294
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=8.4e-34 Score=292.99 Aligned_cols=251 Identities=22% Similarity=0.301 Sum_probs=194.6
Q ss_pred cccccccccccCcccccceEEEEeC-CCchhhhHHhHhhhhhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceE
Q 005045 387 STDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFK 465 (717)
Q Consensus 387 ~~~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~ 465 (717)
....|....+||+|+||.||.|... +++.||+|.+........+.+.+|+.+++.++|||++++++.+ ..++..
T Consensus 19 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~-----~~~~~~ 93 (297)
T cd06659 19 PRSLLENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSY-----LVGEEL 93 (297)
T ss_pred chhhHHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhhe-----eeCCeE
Confidence 3445666778999999999999965 7889999998654444456788999999999999999999984 345689
Q ss_pred EEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeec
Q 005045 466 ALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFG 545 (717)
Q Consensus 466 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg 545 (717)
++||||+++++|.+++.. ..+++..+..++.|++.|++|||+. +++||||+|+||+++.++.++|+|||
T Consensus 94 ~iv~e~~~~~~L~~~~~~--------~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dl~p~Nill~~~~~~kL~dfg 162 (297)
T cd06659 94 WVLMEFLQGGALTDIVSQ--------TRLNEEQIATVCESVLQALCYLHSQ---GVIHRDIKSDSILLTLDGRVKLSDFG 162 (297)
T ss_pred EEEEecCCCCCHHHHHhh--------cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHeEEccCCcEEEeech
Confidence 999999999999987753 3578999999999999999999998 99999999999999999999999999
Q ss_pred cchhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHHHhcC
Q 005045 546 LAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVSMAL 624 (717)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~ 624 (717)
.+...... ........++..|+|||++.+ .++.++|||||||++|+|++|..||....... .........
T Consensus 163 ~~~~~~~~-------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~--~~~~~~~~~ 233 (297)
T cd06659 163 FCAQISKD-------VPKRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQ--AMKRLRDSP 233 (297)
T ss_pred hHhhcccc-------cccccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHhccC
Confidence 88654111 111123458889999999654 58999999999999999999999996432211 111110000
Q ss_pred ChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHHH
Q 005045 625 PDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVNN 701 (717)
Q Consensus 625 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~~ 701 (717)
+ .... .....+..+.+++.+|++.+|++||++.|+++.
T Consensus 234 ~--------~~~~-------------------------------~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~ 271 (297)
T cd06659 234 P--------PKLK-------------------------------NAHKISPVLRDFLERMLTREPQERATAQELLDH 271 (297)
T ss_pred C--------CCcc-------------------------------ccCCCCHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 0 0000 001114457889999999999999999999984
No 295
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=1.3e-33 Score=291.44 Aligned_cols=202 Identities=28% Similarity=0.353 Sum_probs=167.0
Q ss_pred ccccccccccCcccccceEEEEeC-CCchhhhHHhHhhh--hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCce
Q 005045 388 TDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQ--QGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDF 464 (717)
Q Consensus 388 ~~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 464 (717)
.++|++.+.||+|++|.||+|.++ +++.+++|.++... ......+.+|+.++++++||||+++++++... +...
T Consensus 4 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~---~~~~ 80 (293)
T cd07843 4 VDEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGS---NLDK 80 (293)
T ss_pred hhhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEec---CCCc
Confidence 458999999999999999999976 68889999887443 22234567899999999999999999986432 2368
Q ss_pred EEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeee
Q 005045 465 KALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDF 544 (717)
Q Consensus 465 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Df 544 (717)
.++||||++ ++|.+++.... ..+++..++.++.||+.||+|||+. +++||||+|+||+++.++.++|+||
T Consensus 81 ~~lv~e~~~-~~L~~~~~~~~------~~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~~l~d~ 150 (293)
T cd07843 81 IYMVMEYVE-HDLKSLMETMK------QPFLQSEVKCLMLQLLSGVAHLHDN---WILHRDLKTSNLLLNNRGILKICDF 150 (293)
T ss_pred EEEEehhcC-cCHHHHHHhcc------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCcEEEeec
Confidence 999999996 59998886542 3589999999999999999999997 9999999999999999999999999
Q ss_pred ccchhcccccCCCCCCcceeecccccccccCCCccCCC--CCcccchhhHHHHHHHHHhCCCCCCCC
Q 005045 545 GLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNGQ--VSILGDIYSYGILLLEMFTGKRPTGDM 609 (717)
Q Consensus 545 g~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~sDvwslG~vl~elltg~~p~~~~ 609 (717)
|.+....... .......++..|+|||.+.+. ++.++|+||+||++|+|++|..||...
T Consensus 151 g~~~~~~~~~-------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~ 210 (293)
T cd07843 151 GLAREYGSPL-------KPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGK 210 (293)
T ss_pred CceeeccCCc-------cccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 9988652211 111224467889999997543 589999999999999999999999754
No 296
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=7.2e-34 Score=312.23 Aligned_cols=265 Identities=25% Similarity=0.372 Sum_probs=191.4
Q ss_pred cccccccccccccCcccccceEEEEeC-CCchhhhHHhHhh-hhhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCC-
Q 005045 385 SKSTDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQ-QQGALKSFIDECNALKSTRHRNILRVITACSSVDLEG- 461 (717)
Q Consensus 385 ~~~~~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~- 461 (717)
..+..+|+.++.+|+||||.||+++.+ +|+.||||++... .......+.+|+..+++++|||||+++..+.+.....
T Consensus 475 SRY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~ 554 (1351)
T KOG1035|consen 475 SRYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELT 554 (1351)
T ss_pred hhHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccc
Confidence 457889999999999999999999987 9999999999855 3344567889999999999999999985443321000
Q ss_pred --------------------------------------------------------------------------------
Q 005045 462 -------------------------------------------------------------------------------- 461 (717)
Q Consensus 462 -------------------------------------------------------------------------------- 461 (717)
T Consensus 555 ~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS 634 (1351)
T KOG1035|consen 555 VLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTS 634 (1351)
T ss_pred cccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccccccc
Confidence
Q ss_pred ---------------------------------CceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHH
Q 005045 462 ---------------------------------NDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVAS 508 (717)
Q Consensus 462 ---------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~ 508 (717)
.-.+||=||||+..++++++.++.- .-....+++++++|+.
T Consensus 635 ~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~------~~~~d~~wrLFreIlE 708 (1351)
T KOG1035|consen 635 DSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHF------NSQRDEAWRLFREILE 708 (1351)
T ss_pred ccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhccc------chhhHHHHHHHHHHHH
Confidence 0125677788877666666665421 1146788999999999
Q ss_pred HHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeeccchhccc-----------ccCCCCCCcceeecccccccccCCC
Q 005045 509 ALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFE-----------ISDNPSKNQTVSIGLKGSIGYIPPE 577 (717)
Q Consensus 509 ~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~y~aPE 577 (717)
|++|+|++ |+|||||||.|||+++++.|||+|||+|..... .........+..+..+||.-|+|||
T Consensus 709 GLaYIH~~---giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPE 785 (1351)
T KOG1035|consen 709 GLAYIHDQ---GIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPE 785 (1351)
T ss_pred HHHHHHhC---ceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHH
Confidence 99999998 999999999999999999999999999988320 1112222233556788999999999
Q ss_pred ccCC----CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHHHhcCChhhhhhcCCCCCCCCCCcHHHHHHHHHH
Q 005045 578 HMNG----QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVSMALPDHVMDILDPSMPLDEENDEEQIEEVIEE 653 (717)
Q Consensus 578 ~~~~----~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 653 (717)
++.+ +|+.|+|+||||+|++||+ .||....+.-..+...-...+|.. .++.++..
T Consensus 786 ll~~~~~~~Yn~KiDmYSLGIVlFEM~---yPF~TsMERa~iL~~LR~g~iP~~-~~f~~~~~----------------- 844 (1351)
T KOG1035|consen 786 LLSDTSSNKYNSKIDMYSLGIVLFEML---YPFGTSMERASILTNLRKGSIPEP-ADFFDPEH----------------- 844 (1351)
T ss_pred HhcccccccccchhhhHHHHHHHHHHh---ccCCchHHHHHHHHhcccCCCCCC-cccccccc-----------------
Confidence 9654 4899999999999999999 456443111000000000011111 11122111
Q ss_pred HHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHH
Q 005045 654 KEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVN 700 (717)
Q Consensus 654 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~ 700 (717)
..=..+|.++++.||++||||.|++.
T Consensus 845 ---------------------~~e~slI~~Ll~hdP~kRPtA~eLL~ 870 (1351)
T KOG1035|consen 845 ---------------------PEEASLIRWLLSHDPSKRPTATELLN 870 (1351)
T ss_pred ---------------------hHHHHHHHHHhcCCCccCCCHHHHhh
Confidence 12256899999999999999999985
No 297
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=3.1e-33 Score=288.31 Aligned_cols=268 Identities=19% Similarity=0.253 Sum_probs=185.5
Q ss_pred cccccccccccCcccccceEEEEeCC----CchhhhHHhHhhhhhH-----------HHHHHHHHHHHhcCCCCceeEEE
Q 005045 387 STDNFSKENLIGTGSFGSVYKGTLGD----GTIVAIKVLKLQQQGA-----------LKSFIDECNALKSTRHRNILRVI 451 (717)
Q Consensus 387 ~~~~y~~~~~ig~g~~g~v~~~~~~~----~~~vavK~~~~~~~~~-----------~~~~~~e~~~l~~l~h~ni~~~~ 451 (717)
..++|.+.+.||+|+||.||+|.+.+ +..+|+|+........ ......+...+..+.|+++++++
T Consensus 10 ~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~ 89 (294)
T PHA02882 10 TGKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYY 89 (294)
T ss_pred CCCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEE
Confidence 35789999999999999999999653 4456666543221110 11223344556677999999999
Q ss_pred EeeccccCCCCceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCE
Q 005045 452 TACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNV 531 (717)
Q Consensus 452 ~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NI 531 (717)
+++.... ......+++++++ ..++.+.+... ...++..+..++.|++.|++|||+. +|+||||||+||
T Consensus 90 ~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~-------~~~~~~~~~~i~~qi~~~l~~lH~~---~iiHrDiKp~Ni 157 (294)
T PHA02882 90 GCGSFKR-CRMYYRFILLEKL-VENTKEIFKRI-------KCKNKKLIKNIMKDMLTTLEYIHEH---GISHGDIKPENI 157 (294)
T ss_pred EeeeEec-CCceEEEEEEehh-ccCHHHHHHhh-------ccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHE
Confidence 8754321 1122457888887 35676666533 3357788899999999999999997 999999999999
Q ss_pred EeCCCCceEEeeeccchhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHhCCCCCCCCC
Q 005045 532 LLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRPTGDMF 610 (717)
Q Consensus 532 ll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~ 610 (717)
+++.++.++|+|||+|+....................||+.|+|||+..+ .++.++|||||||++|||++|..||....
T Consensus 158 ll~~~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~ 237 (294)
T PHA02882 158 MVDGNNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFG 237 (294)
T ss_pred EEcCCCcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccc
Confidence 99999999999999998663221111111112223468999999999765 48999999999999999999999997653
Q ss_pred CCchhhhHHHHhcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcC
Q 005045 611 KDDFSIHMFVSMALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPR 690 (717)
Q Consensus 611 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~ 690 (717)
....... .... +.+..+..... ....++..+.+++..|++.+|+
T Consensus 238 ~~~~~~~-~~~~---~~~~~~~~~~~--------------------------------~~~~~~~~~~~~~~~~~~~~~~ 281 (294)
T PHA02882 238 HNGNLIH-AAKC---DFIKRLHEGKI--------------------------------KIKNANKFIYDFIECVTKLSYE 281 (294)
T ss_pred cchHHHH-HhHH---HHHHHhhhhhh--------------------------------ccCCCCHHHHHHHHHHHhCCCC
Confidence 2221110 0000 00000000000 1123366789999999999999
Q ss_pred CCCCHHHHHHHH
Q 005045 691 ERIAMNVVVNNL 702 (717)
Q Consensus 691 ~Rps~~eil~~l 702 (717)
+||++.++++.+
T Consensus 282 ~rp~~~~l~~~~ 293 (294)
T PHA02882 282 EKPDYDALIKIF 293 (294)
T ss_pred CCCCHHHHHHhh
Confidence 999999999876
No 298
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-33 Score=265.20 Aligned_cols=256 Identities=21% Similarity=0.244 Sum_probs=198.5
Q ss_pred cccccccc-cccCcccccceEEEEeC-CCchhhhHHhHhhhhhHHHHHHHHHHHHhcC-CCCceeEEEEeeccccCCCCc
Q 005045 387 STDNFSKE-NLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQQGALKSFIDECNALKST-RHRNILRVITACSSVDLEGND 463 (717)
Q Consensus 387 ~~~~y~~~-~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~~~~~~~ 463 (717)
.+++|++. ++||-|-.|.|-.+..+ +++++|+|++.-. ...++|++..-.. .|||||.+++++.-. +...+
T Consensus 59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds-----~KARrEVeLHw~~s~h~~iV~IidVyeNs-~~~rk 132 (400)
T KOG0604|consen 59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS-----PKARREVELHWMASGHPHIVSIIDVYENS-YQGRK 132 (400)
T ss_pred chhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC-----HHHHhHhhhhhhhcCCCceEEeehhhhhh-ccCce
Confidence 35567664 57899999999999966 8999999998622 4456788876665 799999999987554 56667
Q ss_pred eEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCC---CCceE
Q 005045 464 FKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDK---DMTAH 540 (717)
Q Consensus 464 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~---~~~~k 540 (717)
.+.+|||.++||.|...++.+.. ..+++.++..|++||..|++|||+. .|.||||||+|++.+. +..+|
T Consensus 133 cLLiVmE~meGGeLfsriq~~g~-----~afTErea~eI~~qI~~Av~~lH~~---nIAHRDlKpENLLyt~t~~na~lK 204 (400)
T KOG0604|consen 133 CLLIVMECMEGGELFSRIQDRGD-----QAFTEREASEIMKQIGLAVRYLHSM---NIAHRDLKPENLLYTTTSPNAPLK 204 (400)
T ss_pred eeEeeeecccchHHHHHHHHccc-----ccchHHHHHHHHHHHHHHHHHHHhc---chhhccCChhheeeecCCCCcceE
Confidence 78899999999999999987643 6799999999999999999999998 9999999999999974 45899
Q ss_pred EeeeccchhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHH
Q 005045 541 VGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMF 619 (717)
Q Consensus 541 l~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~ 619 (717)
|+|||.|+... ....-....-|+.|+|||++.. +|+...|+||+||++|-|+.|.+||.......
T Consensus 205 LtDfGFAK~t~--------~~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~a------ 270 (400)
T KOG0604|consen 205 LTDFGFAKETQ--------EPGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA------ 270 (400)
T ss_pred ecccccccccC--------CCccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCcc------
Confidence 99999998642 2333445678999999999765 58999999999999999999999997654321
Q ss_pred HHhcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHH
Q 005045 620 VSMALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVV 699 (717)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil 699 (717)
++..+..-+....-.. ++++ =.+.++...++|+.+|+.+|.+|.|+.|+.
T Consensus 271 ----ispgMk~rI~~gqy~F--------------------P~pE------Ws~VSe~aKdlIR~LLkt~PteRlTI~~~m 320 (400)
T KOG0604|consen 271 ----ISPGMKRRIRTGQYEF--------------------PEPE------WSCVSEAAKDLIRKLLKTEPTERLTIEEVM 320 (400)
T ss_pred ----CChhHHhHhhccCccC--------------------CChh------HhHHHHHHHHHHHHHhcCCchhheeHHHhh
Confidence 1111111111111000 1111 123466678899999999999999999987
Q ss_pred H
Q 005045 700 N 700 (717)
Q Consensus 700 ~ 700 (717)
.
T Consensus 321 ~ 321 (400)
T KOG0604|consen 321 D 321 (400)
T ss_pred c
Confidence 4
No 299
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=9.4e-34 Score=300.24 Aligned_cols=202 Identities=27% Similarity=0.286 Sum_probs=166.3
Q ss_pred cccccccccccCcccccceEEEEeC-CCchhhhHHhHhh--hhhHHHHHHHHHHHHhcCCCCceeEEEEeecccc-CCCC
Q 005045 387 STDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQ--QQGALKSFIDECNALKSTRHRNILRVITACSSVD-LEGN 462 (717)
Q Consensus 387 ~~~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~-~~~~ 462 (717)
..++|++.+.||+|++|.||.|... +++.||+|.+... .......+.+|+.+++.++|+||+++++++.... +.+.
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 93 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF 93 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence 4578999999999999999999965 7899999988642 2333456778999999999999999998864322 2233
Q ss_pred ceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEe
Q 005045 463 DFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVG 542 (717)
Q Consensus 463 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~ 542 (717)
...|+||||++ +++.+++.. .++...+..++.|++.||+|||+. |++||||||+||+++.++.+||+
T Consensus 94 ~~~~lv~e~~~-~~l~~~~~~---------~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nil~~~~~~~kL~ 160 (353)
T cd07850 94 QDVYLVMELMD-ANLCQVIQM---------DLDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKIL 160 (353)
T ss_pred CcEEEEEeccC-CCHHHHHhh---------cCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEc
Confidence 46899999995 588887752 378889999999999999999998 99999999999999999999999
Q ss_pred eeccchhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHhCCCCCCCC
Q 005045 543 DFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRPTGDM 609 (717)
Q Consensus 543 Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~ 609 (717)
|||.+...... .......++..|+|||.+.+ .++.++|||||||++|+|++|+.||...
T Consensus 161 Dfg~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~ 220 (353)
T cd07850 161 DFGLARTAGTS--------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGT 220 (353)
T ss_pred cCccceeCCCC--------CCCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCC
Confidence 99999765211 11223457889999999655 5899999999999999999999999754
No 300
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=2.1e-33 Score=294.56 Aligned_cols=204 Identities=24% Similarity=0.338 Sum_probs=161.1
Q ss_pred ccccCcc--cccceEEEEeC-CCchhhhHHhHhhh--hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceEEEE
Q 005045 394 ENLIGTG--SFGSVYKGTLG-DGTIVAIKVLKLQQ--QGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFKALV 468 (717)
Q Consensus 394 ~~~ig~g--~~g~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~lv 468 (717)
...||.| ++|.||.|.+. +|+.||+|++.... ....+.+.+|+.+++.++||||+++++++ ..++..++|
T Consensus 3 ~~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~-----~~~~~~~~v 77 (328)
T cd08226 3 QVEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVF-----TTGSWLWVI 77 (328)
T ss_pred HHHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeE-----ecCCceEEE
Confidence 3466776 88999999965 89999999987532 33457888999999999999999999995 345588999
Q ss_pred EecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeeccch
Q 005045 469 FEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAK 548 (717)
Q Consensus 469 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~ 548 (717)
|||++++++.+++..... ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.++++||+.+.
T Consensus 78 ~e~~~~~~l~~~l~~~~~-----~~~~~~~~~~~~~qi~~aL~~lH~~---~ivHrDlkp~Nill~~~~~~~~~~~~~~~ 149 (328)
T cd08226 78 SPFMAYGSANSLLKTYFP-----EGMSEALIGNILFGALRGLNYLHQN---GYIHRNIKASHILISGDGLVSLSGLSHLY 149 (328)
T ss_pred EecccCCCHHHHHHhhcc-----cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEeCCCcEEEechHHHh
Confidence 999999999999875421 4588999999999999999999997 99999999999999999999999998654
Q ss_pred hcccccCCCCCCcceeecccccccccCCCccCCC---CCcccchhhHHHHHHHHHhCCCCCCCCC
Q 005045 549 FLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNGQ---VSILGDIYSYGILLLEMFTGKRPTGDMF 610 (717)
Q Consensus 549 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~sDvwslG~vl~elltg~~p~~~~~ 610 (717)
....................++..|+|||++.+. ++.++|||||||++|+|++|..||....
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~ 214 (328)
T cd08226 150 SLVRNGQKAKVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDML 214 (328)
T ss_pred hhhccCccccccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcC
Confidence 4321111110001111112356679999997553 6899999999999999999999997653
No 301
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=8.8e-34 Score=267.69 Aligned_cols=208 Identities=24% Similarity=0.321 Sum_probs=172.3
Q ss_pred ccccccccccCcccccceEEEEeC---C--CchhhhHHhHhhh--hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCC
Q 005045 388 TDNFSKENLIGTGSFGSVYKGTLG---D--GTIVAIKVLKLQQ--QGALKSFIDECNALKSTRHRNILRVITACSSVDLE 460 (717)
Q Consensus 388 ~~~y~~~~~ig~g~~g~v~~~~~~---~--~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~ 460 (717)
...|+.+.+||+|.+|.||+|..+ + .+.+|+|.++... .+.-...-+|+..++.++|||++.+..++ +.
T Consensus 23 l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vf----l~ 98 (438)
T KOG0666|consen 23 LFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVF----LS 98 (438)
T ss_pred HHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHH----hc
Confidence 347999999999999999999632 2 3479999998652 22335567899999999999999998886 44
Q ss_pred CCceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCC----
Q 005045 461 GNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKD---- 536 (717)
Q Consensus 461 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~---- 536 (717)
.+...++++||.+ -+|+++++-++.... +.++...++.|+.||+.|+.|||++ =|.||||||.||||..+
T Consensus 99 ~d~~v~l~fdYAE-hDL~~II~fHr~~~~--~~lp~~mvKsilwQil~Gv~YLH~N---WvlHRDLKPaNIlvmgdgper 172 (438)
T KOG0666|consen 99 HDKKVWLLFDYAE-HDLWHIIKFHRASKA--KQLPRSMVKSILWQILDGVHYLHSN---WVLHRDLKPANILVMGDGPER 172 (438)
T ss_pred cCceEEEEehhhh-hhHHHHHHHhccchh--ccCCHHHHHHHHHHHHhhhHHHhhh---heeeccCCcceEEEeccCCcc
Confidence 4778999999996 589999876654333 5789999999999999999999998 89999999999999877
Q ss_pred CceEEeeeccchhcccccCCCCCCcceeecccccccccCCCccCC--CCCcccchhhHHHHHHHHHhCCCCCCCC
Q 005045 537 MTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG--QVSILGDIYSYGILLLEMFTGKRPTGDM 609 (717)
Q Consensus 537 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~sDvwslG~vl~elltg~~p~~~~ 609 (717)
|.|||+|+|+++.+..+-.... ......-|..|+|||.+-| .||.+.||||.||++.||+|-++.|.+.
T Consensus 173 G~VKIaDlGlaR~~~~plkpl~----s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~ 243 (438)
T KOG0666|consen 173 GRVKIADLGLARLFNNPLKPLA----SLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGR 243 (438)
T ss_pred CeeEeecccHHHHhhccccccc----cCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccch
Confidence 8999999999999854443332 2334567899999999765 4899999999999999999999988764
No 302
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=3.1e-33 Score=285.61 Aligned_cols=263 Identities=23% Similarity=0.422 Sum_probs=194.1
Q ss_pred cccccccCcccccceEEEEeC----CCchhhhHHhHhh--hhhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCC-CCc
Q 005045 391 FSKENLIGTGSFGSVYKGTLG----DGTIVAIKVLKLQ--QQGALKSFIDECNALKSTRHRNILRVITACSSVDLE-GND 463 (717)
Q Consensus 391 y~~~~~ig~g~~g~v~~~~~~----~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~-~~~ 463 (717)
|.+.+.||+|++|.||+|.++ +++.||+|++... .....+.+.+|++++++++||||+++++.+...... ...
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 677889999999999999843 4688999988643 233456788999999999999999999986543211 112
Q ss_pred eEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEee
Q 005045 464 FKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGD 543 (717)
Q Consensus 464 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~D 543 (717)
..++++||++++++.+++....... ....+++..+.+++.||+.|++|||+. +++||||||+||+++.++.+||+|
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~nili~~~~~~kl~d 156 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGE-EPFTLPLQTLVRFMIDIASGMEYLSSK---NFIHRDLAARNCMLNENMTVCVAD 156 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccC-CCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccchhhEEEcCCCCEEECc
Confidence 3578999999999988864321100 113578899999999999999999997 999999999999999999999999
Q ss_pred eccchhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHh-CCCCCCCCCCCchhhhHHHH
Q 005045 544 FGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFT-GKRPTGDMFKDDFSIHMFVS 621 (717)
Q Consensus 544 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~ 621 (717)
||.++...... .........++..|++||...+ .++.++|||||||++|+|++ |..||......+ ......
T Consensus 157 fg~~~~~~~~~-----~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~--~~~~~~ 229 (273)
T cd05074 157 FGLSKKIYSGD-----YYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSE--IYNYLI 229 (273)
T ss_pred ccccccccCCc-----ceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHH--HHHHHH
Confidence 99988652111 0111112234567999999654 47889999999999999999 888886542211 110000
Q ss_pred hcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHHH
Q 005045 622 MALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVNN 701 (717)
Q Consensus 622 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~~ 701 (717)
. . .... .+..++..+.+++.+|++.+|++|||+.|+++.
T Consensus 230 ~--------~--~~~~-------------------------------~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~ 268 (273)
T cd05074 230 K--------G--NRLK-------------------------------QPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQ 268 (273)
T ss_pred c--------C--CcCC-------------------------------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 0 0 0000 001125578899999999999999999999999
Q ss_pred HHHH
Q 005045 702 LKTI 705 (717)
Q Consensus 702 l~~i 705 (717)
|+++
T Consensus 269 l~~~ 272 (273)
T cd05074 269 LELI 272 (273)
T ss_pred HHhh
Confidence 9876
No 303
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=4.2e-33 Score=283.64 Aligned_cols=259 Identities=24% Similarity=0.365 Sum_probs=199.0
Q ss_pred cccccccccCcccccceEEEEeC-CCchhhhHHhHhhh-hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceEE
Q 005045 389 DNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQ-QGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFKA 466 (717)
Q Consensus 389 ~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~ 466 (717)
++|++.+.+|.|++|.||.|... ++..+++|++.... ....+.+.+|+++++.++|+||+++++.+. .+...+
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~~~ 75 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFV-----VGDELW 75 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEe-----eCCEEE
Confidence 47999999999999999999954 78889999886432 235577899999999999999999998853 455899
Q ss_pred EEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeecc
Q 005045 467 LVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGL 546 (717)
Q Consensus 467 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~ 546 (717)
+|||++++++|.+++..... ...+++..+..++.|++.|++|||+. +++||||+|+||++++++.++|+|||.
T Consensus 76 iv~e~~~~~~l~~~~~~~~~----~~~~~~~~~~~~~~ql~~al~~lh~~---~i~h~~l~p~ni~~~~~~~~~l~df~~ 148 (267)
T cd06610 76 LVMPYLSGGSLLDIMKSSYP----RGGLDEAIIATVLKEVLKGLEYLHSN---GQIHRDIKAGNILLGEDGSVKIADFGV 148 (267)
T ss_pred EEEeccCCCcHHHHHHHhcc----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEcccch
Confidence 99999999999999875321 14588999999999999999999998 999999999999999999999999999
Q ss_pred chhcccccCCCCCCcceeecccccccccCCCccCC--CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHHHhcC
Q 005045 547 AKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG--QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVSMAL 624 (717)
Q Consensus 547 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~ 624 (717)
+..+....... ........++..|+|||.+.. .++.++|+|||||++|+|++|+.||........ .......
T Consensus 149 ~~~~~~~~~~~---~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~-~~~~~~~-- 222 (267)
T cd06610 149 SASLADGGDRT---RKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKV-LMLTLQN-- 222 (267)
T ss_pred HHHhccCcccc---ccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhh-HHHHhcC--
Confidence 88763322111 011223457889999999644 478999999999999999999999975432211 1110000
Q ss_pred ChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHH
Q 005045 625 PDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVN 700 (717)
Q Consensus 625 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~ 700 (717)
..+...... ....++..+.+++.+|++.+|++|||++|+++
T Consensus 223 -------~~~~~~~~~----------------------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~ 263 (267)
T cd06610 223 -------DPPSLETGA----------------------------DYKKYSKSFRKMISLCLQKDPSKRPTAEELLK 263 (267)
T ss_pred -------CCCCcCCcc----------------------------ccccccHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 000000000 01233566789999999999999999999986
No 304
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=2.4e-33 Score=288.39 Aligned_cols=256 Identities=25% Similarity=0.357 Sum_probs=201.6
Q ss_pred ccccccccccccccCcccccceEEEEeC-CCchhhhHHhHhhhhhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCC
Q 005045 384 ISKSTDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRVITACSSVDLEGN 462 (717)
Q Consensus 384 ~~~~~~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~ 462 (717)
.....+.|++.+.+|+|++|.||.|.++ +++.|++|++..... ....+.+|++.++.++|+|++++++.+.. .
T Consensus 14 ~~~~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-----~ 87 (286)
T cd06614 14 EGDPRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLV-----G 87 (286)
T ss_pred CCCccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEE-----C
Confidence 3467888999999999999999999976 788899999876544 45678899999999999999999998543 4
Q ss_pred ceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEe
Q 005045 463 DFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVG 542 (717)
Q Consensus 463 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~ 542 (717)
...++|+||+++++|.+++.... ..+++..+..++.|++.|++|||+. |++|+||+|+||+++.++.++|+
T Consensus 88 ~~~~lv~e~~~~~~L~~~l~~~~------~~l~~~~~~~i~~~i~~~L~~lH~~---gi~H~dl~p~ni~i~~~~~~~l~ 158 (286)
T cd06614 88 DELWVVMEYMDGGSLTDIITQNF------VRMNEPQIAYVCREVLQGLEYLHSQ---NVIHRDIKSDNILLSKDGSVKLA 158 (286)
T ss_pred CEEEEEEeccCCCcHHHHHHHhc------cCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCChhhEEEcCCCCEEEC
Confidence 58999999999999999998652 3689999999999999999999997 99999999999999999999999
Q ss_pred eeccchhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHHH
Q 005045 543 DFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVS 621 (717)
Q Consensus 543 Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~ 621 (717)
|||.+...... ........++..|+|||.+.+ .++.++|||||||++|+|++|..||....... ......
T Consensus 159 d~~~~~~~~~~-------~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~-~~~~~~- 229 (286)
T cd06614 159 DFGFAAQLTKE-------KSKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLR-ALFLIT- 229 (286)
T ss_pred ccchhhhhccc-------hhhhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHH-
Confidence 99988754211 111123347788999999655 47899999999999999999999986532211 010000
Q ss_pred hcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHHH
Q 005045 622 MALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVNN 701 (717)
Q Consensus 622 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~~ 701 (717)
...... ......++..+.+++.+|++.+|.+|||+.+|++.
T Consensus 230 -----------~~~~~~----------------------------~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~ 270 (286)
T cd06614 230 -----------TKGIPP----------------------------LKNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQH 270 (286)
T ss_pred -----------hcCCCC----------------------------CcchhhCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence 000000 00112235678899999999999999999999864
Q ss_pred H
Q 005045 702 L 702 (717)
Q Consensus 702 l 702 (717)
-
T Consensus 271 ~ 271 (286)
T cd06614 271 P 271 (286)
T ss_pred h
Confidence 3
No 305
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=3.3e-33 Score=287.92 Aligned_cols=196 Identities=31% Similarity=0.419 Sum_probs=169.0
Q ss_pred cccccccccCcccccceEEEEeC-CCchhhhHHhHhhh---hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCce
Q 005045 389 DNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQ---QGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDF 464 (717)
Q Consensus 389 ~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 464 (717)
++|++.+.||+|++|.||.+.+. +++.||+|++.... ......+.+|+++++++.||||+++++.+ ..+..
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~ 75 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSF-----QDDSN 75 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEE-----EcCCe
Confidence 47999999999999999999965 78999999886432 23456788999999999999999999985 44568
Q ss_pred EEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeee
Q 005045 465 KALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDF 544 (717)
Q Consensus 465 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Df 544 (717)
.++||||+++++|.+++... ..+++..+..++.|++.||+|||+. +++||||+|+||+++.++.+||+||
T Consensus 76 ~~~v~e~~~~~~L~~~~~~~-------~~l~~~~~~~~~~qil~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~df 145 (290)
T cd05580 76 LYLVMEYVPGGELFSHLRKS-------GRFPEPVARFYAAQVVLALEYLHSL---DIVYRDLKPENLLLDSDGYIKITDF 145 (290)
T ss_pred EEEEEecCCCCCHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEeeC
Confidence 99999999999999998755 5689999999999999999999997 9999999999999999999999999
Q ss_pred ccchhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHhCCCCCCCC
Q 005045 545 GLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRPTGDM 609 (717)
Q Consensus 545 g~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~ 609 (717)
|.+...... .....+++.|+|||.+.+ .++.++||||||+++|+|++|..||...
T Consensus 146 g~~~~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~ 201 (290)
T cd05580 146 GFAKRVKGR----------TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDD 201 (290)
T ss_pred CCccccCCC----------CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCC
Confidence 998765211 123457889999999654 4789999999999999999999999654
No 306
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=4.4e-33 Score=281.87 Aligned_cols=250 Identities=28% Similarity=0.537 Sum_probs=193.4
Q ss_pred cccccccCcccccceEEEEeC-C----CchhhhHHhHhhhhh-HHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCce
Q 005045 391 FSKENLIGTGSFGSVYKGTLG-D----GTIVAIKVLKLQQQG-ALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDF 464 (717)
Q Consensus 391 y~~~~~ig~g~~g~v~~~~~~-~----~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 464 (717)
+++.+.+|.|+||.||.|.+. . +..||+|.+...... ..+.+..|++.++.++|+||+++++.+. ..+.
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~ 75 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCT-----EEEP 75 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEc-----CCCe
Confidence 457789999999999999965 3 378999998755432 5678899999999999999999999853 3458
Q ss_pred EEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeee
Q 005045 465 KALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDF 544 (717)
Q Consensus 465 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Df 544 (717)
.+++|||+++++|.+++..... ..+++..+..++.|++.|+++||+. +++||||+|+||+++.++.++|+||
T Consensus 76 ~~~i~e~~~~~~l~~~~~~~~~-----~~~~~~~~~~~~~ql~~~l~~lh~~---~~~h~dl~~~nil~~~~~~~~l~df 147 (258)
T smart00219 76 LMIVMEYMEGGDLLDYLRKNRP-----KELSLSDLLSFALQIARGMEYLESK---NFIHRDLAARNCLVGENLVVKISDF 147 (258)
T ss_pred eEEEEeccCCCCHHHHHHhhhh-----ccCCHHHHHHHHHHHHHHHHHHhcC---CeeecccccceEEEccCCeEEEccc
Confidence 9999999999999999875421 2289999999999999999999998 9999999999999999999999999
Q ss_pred ccchhcccccCCCCCCcceeecccccccccCCCccC-CCCCcccchhhHHHHHHHHHh-CCCCCCCCCCCchhhhHHHHh
Q 005045 545 GLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMN-GQVSILGDIYSYGILLLEMFT-GKRPTGDMFKDDFSIHMFVSM 622 (717)
Q Consensus 545 g~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~ 622 (717)
|.+......... ......+++.|+|||.+. +.++.++||||+||++|+|++ |..||...... ........
T Consensus 148 g~~~~~~~~~~~------~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~--~~~~~~~~ 219 (258)
T smart00219 148 GLSRDLYDDDYY------KKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNE--EVLEYLKK 219 (258)
T ss_pred CCceeccccccc------ccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHhc
Confidence 998765322111 111223678899999964 458999999999999999998 78888652111 11111100
Q ss_pred cCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHHHH
Q 005045 623 ALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVNNL 702 (717)
Q Consensus 623 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~~l 702 (717)
..... .+..++.++.+++.+|++.+|++|||+.|+++.|
T Consensus 220 -----------~~~~~------------------------------~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 220 -----------GYRLP------------------------------KPENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred -----------CCCCC------------------------------CCCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 00000 0111356788999999999999999999998764
No 307
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.9e-34 Score=309.84 Aligned_cols=207 Identities=26% Similarity=0.372 Sum_probs=181.9
Q ss_pred cccccccccccccccccCcccccceEEEEeC-CCchhhhHHhHhhh---hhHHHHHHHHHHHHhcCCCCceeEEEEeecc
Q 005045 381 YSDISKSTDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQ---QGALKSFIDECNALKSTRHRNILRVITACSS 456 (717)
Q Consensus 381 ~~~~~~~~~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~ 456 (717)
+.++.-..++|.+++.||+|+||.|..++.+ +++.||+|+++... ......|..|.++|..-+.+=|+.+...
T Consensus 67 v~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyA--- 143 (1317)
T KOG0612|consen 67 VKELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYA--- 143 (1317)
T ss_pred HHHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHH---
Confidence 4556667889999999999999999999965 89999999998753 3445778999999998888888887666
Q ss_pred ccCCCCceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCC
Q 005045 457 VDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKD 536 (717)
Q Consensus 457 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~ 536 (717)
+++..++|+||||++||+|-..+.+. ..+++..++.++..|+-||+.+|+. |||||||||+||++|..
T Consensus 144 --FQD~~~LYlVMdY~pGGDlltLlSk~-------~~~pE~~ArFY~aEiVlAldslH~m---gyVHRDiKPDNvLld~~ 211 (1317)
T KOG0612|consen 144 --FQDERYLYLVMDYMPGGDLLTLLSKF-------DRLPEDWARFYTAEIVLALDSLHSM---GYVHRDIKPDNVLLDKS 211 (1317)
T ss_pred --hcCccceEEEEecccCchHHHHHhhc-------CCChHHHHHHHHHHHHHHHHHHHhc---cceeccCCcceeEeccc
Confidence 78888999999999999999999865 5799999999999999999999998 99999999999999999
Q ss_pred CceEEeeeccchhcccccCCCCCCcceeecccccccccCCCccC------CCCCcccchhhHHHHHHHHHhCCCCCCC
Q 005045 537 MTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMN------GQVSILGDIYSYGILLLEMFTGKRPTGD 608 (717)
Q Consensus 537 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~------~~~~~~sDvwslG~vl~elltg~~p~~~ 608 (717)
|++||+|||.+..+. .+.........|||.|.+||++. |.|+..+|+||+||++|||+.|.-||..
T Consensus 212 GHikLADFGsClkm~------~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYa 283 (1317)
T KOG0612|consen 212 GHIKLADFGSCLKMD------ADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYA 283 (1317)
T ss_pred CcEeeccchhHHhcC------CCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchH
Confidence 999999999998872 23344556678999999999952 4589999999999999999999999964
No 308
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=1.3e-33 Score=285.73 Aligned_cols=246 Identities=23% Similarity=0.337 Sum_probs=195.2
Q ss_pred ccccccccCcccccceEEEEeC-CCchhhhHHhHhhh---hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceE
Q 005045 390 NFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQ---QGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFK 465 (717)
Q Consensus 390 ~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~ 465 (717)
+|++.+.||.|++|.||.|.++ +++.||+|++.... ....+.+.+|++++++++||||+++++. +.++...
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~-----~~~~~~~ 75 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYS-----FQDEENM 75 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHh-----hcCCCeE
Confidence 5889999999999999999975 78999999887542 2446788999999999999999999888 4456689
Q ss_pred EEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeec
Q 005045 466 ALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFG 545 (717)
Q Consensus 466 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg 545 (717)
++||||+++++|.+++... ..+++..+..++.|+++|++|||++ +++|+||+|+||+++.++.++|+|||
T Consensus 76 ~lv~e~~~~~~L~~~l~~~-------~~l~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~l~d~~ 145 (258)
T cd05578 76 YLVVDLLLGGDLRYHLSQK-------VKFSEEQVKFWICEIVLALEYLHSK---GIIHRDIKPDNILLDEQGHVHITDFN 145 (258)
T ss_pred EEEEeCCCCCCHHHHHHhc-------CCcCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEEcCCCCEEEeecc
Confidence 9999999999999998754 4688999999999999999999998 99999999999999999999999999
Q ss_pred cchhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHHHhcC
Q 005045 546 LAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVSMAL 624 (717)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~ 624 (717)
.+....... ......++..|+|||.+.+ .++.++|+||||+++|+|++|..||....... .....
T Consensus 146 ~~~~~~~~~--------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~--~~~~~---- 211 (258)
T cd05578 146 IATKVTPDT--------LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTI--RDQIR---- 211 (258)
T ss_pred cccccCCCc--------cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccH--HHHHH----
Confidence 987652111 1223457888999999655 47999999999999999999999997653321 00000
Q ss_pred ChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCH--HHHH
Q 005045 625 PDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAM--NVVV 699 (717)
Q Consensus 625 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~--~eil 699 (717)
......... .++..+..+.+++.+||+.+|.+||++ +|++
T Consensus 212 -----~~~~~~~~~------------------------------~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~ 253 (258)
T cd05578 212 -----AKQETADVL------------------------------YPATWSTEAIDAINKLLERDPQKRLGDNLKDLK 253 (258)
T ss_pred -----HHhcccccc------------------------------CcccCcHHHHHHHHHHccCChhHcCCccHHHHh
Confidence 000000000 111225677899999999999999999 6654
No 309
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=3.6e-33 Score=287.50 Aligned_cols=278 Identities=22% Similarity=0.285 Sum_probs=197.7
Q ss_pred cccccccccCcccccceEEEEeC-CCchhhhHHhHhhh--hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceE
Q 005045 389 DNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQ--QGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFK 465 (717)
Q Consensus 389 ~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~ 465 (717)
++|++.++||+|++|.||+|.++ +++.|++|.+.... ......+.+|+++++++.|+||+++++.+. .++..
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~~ 75 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFR-----RKGRL 75 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEE-----ECCEE
Confidence 47999999999999999999965 68899999987542 334578899999999999999999999853 35589
Q ss_pred EEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeec
Q 005045 466 ALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFG 545 (717)
Q Consensus 466 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg 545 (717)
++||||++++.+..+.... ..+++..+..++.||+.|++|||+. +++||||+|+||+++.++.+||+|||
T Consensus 76 ~iv~e~~~~~~l~~~~~~~-------~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~ni~~~~~~~~kl~d~g 145 (288)
T cd07833 76 YLVFEYVERTLLELLEASP-------GGLPPDAVRSYIWQLLQAIAYCHSH---NIIHRDIKPENILVSESGVLKLCDFG 145 (288)
T ss_pred EEEEecCCCCHHHHHHhcC-------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEEeee
Confidence 9999999876666655433 4589999999999999999999998 99999999999999999999999999
Q ss_pred cchhcccccCCCCCCcceeecccccccccCCCccCC--CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhH-HHHh
Q 005045 546 LAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG--QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHM-FVSM 622 (717)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~-~~~~ 622 (717)
.+........ .......++..|+|||++.+ .++.++||||||+++|+|++|..||......+..... ....
T Consensus 146 ~~~~~~~~~~------~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~ 219 (288)
T cd07833 146 FARALRARPA------SPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLG 219 (288)
T ss_pred cccccCCCcc------ccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhC
Confidence 9886522211 11223457888999999644 4689999999999999999999999754322111100 0011
Q ss_pred cCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHH
Q 005045 623 ALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVN 700 (717)
Q Consensus 623 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~ 700 (717)
.++..........-.... ... .+. .+........+..++.++.+++.+||+.+|++|||++++++
T Consensus 220 ~~~~~~~~~~~~~~~~~~-~~~---~~~---------~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 284 (288)
T cd07833 220 PLPPSHQELFSSNPRFAG-VAF---PEP---------SQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ 284 (288)
T ss_pred CCCHHHhhhcccCccccc-ccc---CCC---------CCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence 111111111110000000 000 000 00000000011223677899999999999999999999975
No 310
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=4.5e-33 Score=282.89 Aligned_cols=253 Identities=27% Similarity=0.439 Sum_probs=196.5
Q ss_pred ccccccccCcccccceEEEEeC-CCchhhhHHhHhhhh--hHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceEE
Q 005045 390 NFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQQ--GALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFKA 466 (717)
Q Consensus 390 ~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~ 466 (717)
+|.+.+.||+|++|.||.|... +++.|++|.+..... ...+.+..|+++++.++|+||+++++.+ ...+..+
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~-----~~~~~~~ 75 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVE-----VHREKVY 75 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeE-----ecCCEEE
Confidence 5889999999999999999954 788999999875543 3567889999999999999999999984 3456899
Q ss_pred EEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeecc
Q 005045 467 LVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGL 546 (717)
Q Consensus 467 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~ 546 (717)
+|+||+++++|.+++... ..+++..+..++.++++|++|||+. +++|+||+|+||+++.++.+||+|||.
T Consensus 76 lv~e~~~~~~L~~~~~~~-------~~~~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~kl~d~g~ 145 (264)
T cd06626 76 IFMEYCSGGTLEELLEHG-------RILDEHVIRVYTLQLLEGLAYLHSH---GIVHRDIKPANIFLDHNGVIKLGDFGC 145 (264)
T ss_pred EEEecCCCCcHHHHHhhc-------CCCChHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccccc
Confidence 999999999999999754 4578899999999999999999997 999999999999999999999999999
Q ss_pred chhcccccCCCCCCcceeecccccccccCCCccCCC----CCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHHHh
Q 005045 547 AKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNGQ----VSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVSM 622 (717)
Q Consensus 547 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~----~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~ 622 (717)
+............ ......++..|+|||.+.+. ++.++||||||+++|++++|..||....... ........
T Consensus 146 ~~~~~~~~~~~~~---~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~-~~~~~~~~ 221 (264)
T cd06626 146 AVKLKNNTTTMGE---EVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEF-QIMFHVGA 221 (264)
T ss_pred ccccCCCCCcccc---cccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchH-HHHHHHhc
Confidence 8875322111110 01224578899999996543 6899999999999999999999996542211 11111000
Q ss_pred cCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHH
Q 005045 623 ALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVN 700 (717)
Q Consensus 623 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~ 700 (717)
. ..+.++ ....++..+.+++.+||+.+|++|||+.|++.
T Consensus 222 ~--------~~~~~~-------------------------------~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~ 260 (264)
T cd06626 222 G--------HKPPIP-------------------------------DSLQLSPEGKDFLDRCLESDPKKRPTASELLQ 260 (264)
T ss_pred C--------CCCCCC-------------------------------cccccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 0 000110 01112455778999999999999999999874
No 311
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.3e-33 Score=291.68 Aligned_cols=204 Identities=30% Similarity=0.430 Sum_probs=179.9
Q ss_pred cccccccccccccccCcccccceEEEEeC-CCchhhhHHhHhhh--hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccC
Q 005045 383 DISKSTDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQ--QGALKSFIDECNALKSTRHRNILRVITACSSVDL 459 (717)
Q Consensus 383 ~~~~~~~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~ 459 (717)
+-....+.|.++..||+|.|+.|.+|.+. ++..||+|.+.... ....+.+.+|+++++.+.||||++++.+ .
T Consensus 50 ~~~~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v-----~ 124 (596)
T KOG0586|consen 50 DDSNSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSV-----I 124 (596)
T ss_pred cccccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeee-----e
Confidence 44566789999999999999999999955 89999999998653 3344568899999999999999999999 5
Q ss_pred CCCceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCce
Q 005045 460 EGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTA 539 (717)
Q Consensus 460 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~ 539 (717)
+....+|+||||+.+|.+.+|+.+. +++.+..+..++.|+++|++|||+. .|||||||++||+++.+.++
T Consensus 125 ~t~~~lylV~eya~~ge~~~yl~~~-------gr~~e~~ar~~F~q~vsaveYcH~k---~ivHrdLk~eNilL~~~mni 194 (596)
T KOG0586|consen 125 ETEATLYLVMEYASGGELFDYLVKH-------GRMKEKEARAKFRQIVSAVEYCHSK---NIVHRDLKAENILLDENMNI 194 (596)
T ss_pred eecceeEEEEEeccCchhHHHHHhc-------ccchhhhhhhhhHHHHHHHHHHhhc---ceeccccchhhcccccccce
Confidence 5566899999999999999999877 5677799999999999999999997 99999999999999999999
Q ss_pred EEeeeccchhcccccCCCCCCcceeecccccccccCCCccCCC--CCcccchhhHHHHHHHHHhCCCCCCCC
Q 005045 540 HVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNGQ--VSILGDIYSYGILLLEMFTGKRPTGDM 609 (717)
Q Consensus 540 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~sDvwslG~vl~elltg~~p~~~~ 609 (717)
||+|||.+.++. .......+.|++.|.|||++.|. .++++|+||+|+++|-|+.|..||++.
T Consensus 195 kIaDfgfS~~~~--------~~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~ 258 (596)
T KOG0586|consen 195 KIADFGFSTFFD--------YGLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQ 258 (596)
T ss_pred eeeccccceeec--------ccccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCc
Confidence 999999998872 22333457899999999998885 589999999999999999999999864
No 312
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=4.6e-33 Score=284.97 Aligned_cols=247 Identities=23% Similarity=0.371 Sum_probs=192.9
Q ss_pred ccccccccCcccccceEEEEe-CCCchhhhHHhHhh-hhhHHHHHHHHHHHHhcCC---CCceeEEEEeeccccCCCCce
Q 005045 390 NFSKENLIGTGSFGSVYKGTL-GDGTIVAIKVLKLQ-QQGALKSFIDECNALKSTR---HRNILRVITACSSVDLEGNDF 464 (717)
Q Consensus 390 ~y~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~---h~ni~~~~~~~~~~~~~~~~~ 464 (717)
.|++.+.+|+|++|.||+|.+ .+++.||+|.+... .......+.+|+++++++. |||++++++.+. ....
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~-----~~~~ 76 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYL-----KGPR 76 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeee-----eCCE
Confidence 588899999999999999996 47899999988654 2334567888999999986 999999999853 4458
Q ss_pred EEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeee
Q 005045 465 KALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDF 544 (717)
Q Consensus 465 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Df 544 (717)
.++||||+++++|.+++.. ..+++..+..++.|++.|++|||+. +++||||+|+||+++.++.++|+||
T Consensus 77 ~~lv~e~~~~~~L~~~~~~--------~~l~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~p~ni~i~~~~~~~l~df 145 (277)
T cd06917 77 LWIIMEYAEGGSVRTLMKA--------GPIAEKYISVIIREVLVALKYIHKV---GVIHRDIKAANILVTNTGNVKLCDF 145 (277)
T ss_pred EEEEEecCCCCcHHHHHHc--------cCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHHEEEcCCCCEEEccC
Confidence 8999999999999998854 3578999999999999999999997 9999999999999999999999999
Q ss_pred ccchhcccccCCCCCCcceeecccccccccCCCccCC-C-CCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHHHh
Q 005045 545 GLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-Q-VSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVSM 622 (717)
Q Consensus 545 g~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~-~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~ 622 (717)
|.+....... .......|+..|+|||.+.+ . ++.++|||||||++|+|++|..||........ ..
T Consensus 146 g~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~-----~~- 212 (277)
T cd06917 146 GVAALLNQNS-------SKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRA-----MM- 212 (277)
T ss_pred CceeecCCCc-------cccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhh-----hh-
Confidence 9987652211 11223458889999999654 3 68899999999999999999999965422110 00
Q ss_pred cCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHHH
Q 005045 623 ALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVNN 701 (717)
Q Consensus 623 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~~ 701 (717)
. ......+.+.. ...+..+.+++.+||+.+|++||++.|++..
T Consensus 213 ~----~~~~~~~~~~~--------------------------------~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~ 255 (277)
T cd06917 213 L----IPKSKPPRLED--------------------------------NGYSKLLREFVAACLDEEPKERLSAEELLKS 255 (277)
T ss_pred c----cccCCCCCCCc--------------------------------ccCCHHHHHHHHHHcCCCcccCcCHHHHhhC
Confidence 0 00000000100 0124567889999999999999999999863
No 313
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=6.2e-33 Score=288.29 Aligned_cols=248 Identities=24% Similarity=0.322 Sum_probs=192.6
Q ss_pred ccccccccccccCcccccceEEEEeC-CCchhhhHHhHhhh---hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCC
Q 005045 386 KSTDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQ---QGALKSFIDECNALKSTRHRNILRVITACSSVDLEG 461 (717)
Q Consensus 386 ~~~~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~ 461 (717)
....+|++.+.+|+|++|.||.|... +++.||+|.+.... ....+.+.+|+++++.++||||+++.+++..
T Consensus 12 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~----- 86 (307)
T cd06607 12 DPEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLR----- 86 (307)
T ss_pred CcchhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEe-----
Confidence 44567999999999999999999965 78899999875332 2334678899999999999999999999643
Q ss_pred CceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEE
Q 005045 462 NDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHV 541 (717)
Q Consensus 462 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl 541 (717)
.+..++||||++ +++.+++.... ..+++..+..++.|++.|+.|||+. +++||||+|+||+++.++.++|
T Consensus 87 ~~~~~lv~e~~~-g~l~~~~~~~~------~~l~~~~~~~~~~ql~~~L~~LH~~---~i~H~dl~p~nIl~~~~~~~kL 156 (307)
T cd06607 87 EHTAWLVMEYCL-GSASDILEVHK------KPLQEVEIAAICHGALQGLAYLHSH---ERIHRDIKAGNILLTEPGTVKL 156 (307)
T ss_pred CCeEEEEHHhhC-CCHHHHHHHcc------cCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEECCCCCEEE
Confidence 457899999996 57777765332 4589999999999999999999998 9999999999999999999999
Q ss_pred eeeccchhcccccCCCCCCcceeecccccccccCCCccC----CCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhh
Q 005045 542 GDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMN----GQVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIH 617 (717)
Q Consensus 542 ~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~----~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~ 617 (717)
+|||.+..... .....++..|+|||++. +.++.++||||||+++|+|++|..||........ .
T Consensus 157 ~dfg~~~~~~~-----------~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~--~ 223 (307)
T cd06607 157 ADFGSASLVSP-----------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA--L 223 (307)
T ss_pred eecCcceecCC-----------CCCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHH--H
Confidence 99998865411 11235778899999863 3478999999999999999999999865321110 0
Q ss_pred HHHHhcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHH
Q 005045 618 MFVSMALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNV 697 (717)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~e 697 (717)
....... .+.. ....++..+.+++.+||+.+|++||++.+
T Consensus 224 ~~~~~~~--------~~~~--------------------------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ 263 (307)
T cd06607 224 YHIAQND--------SPTL--------------------------------SSNDWSDYFRNFVDSCLQKIPQDRPSSEE 263 (307)
T ss_pred HHHhcCC--------CCCC--------------------------------CchhhCHHHHHHHHHHhcCChhhCcCHHH
Confidence 0000000 0000 01123567889999999999999999999
Q ss_pred HHHH
Q 005045 698 VVNN 701 (717)
Q Consensus 698 il~~ 701 (717)
|+..
T Consensus 264 il~~ 267 (307)
T cd06607 264 LLKH 267 (307)
T ss_pred HhcC
Confidence 9874
No 314
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=9e-34 Score=282.72 Aligned_cols=279 Identities=26% Similarity=0.359 Sum_probs=208.4
Q ss_pred ccccccccccCcccccceEEEEeCCCchhhhHHhHhhhhhHHHHHHHHHHHHhcC--CCCceeEEEEeeccccCCCCceE
Q 005045 388 TDNFSKENLIGTGSFGSVYKGTLGDGTIVAIKVLKLQQQGALKSFIDECNALKST--RHRNILRVITACSSVDLEGNDFK 465 (717)
Q Consensus 388 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l--~h~ni~~~~~~~~~~~~~~~~~~ 465 (717)
....+..+.+|+|.||.||+|+.. ++.||||++... ..+.+.+|.+|.+.. .|+||+++++.-.... .....+
T Consensus 209 l~pl~l~eli~~Grfg~V~KaqL~-~~~VAVKifp~~---~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t-~~~~ey 283 (534)
T KOG3653|consen 209 LDPLQLLELIGRGRFGCVWKAQLD-NRLVAVKIFPEQ---EKQSFQNEKNIYSLPGMKHENILQFIGAEKRGT-ADRMEY 283 (534)
T ss_pred CCchhhHHHhhcCccceeehhhcc-CceeEEEecCHH---HHHHHHhHHHHHhccCccchhHHHhhchhccCC-ccccce
Confidence 446677889999999999999974 589999999854 456788888887764 8999999998854332 224578
Q ss_pred EEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcC------CCCeeecCCCCCCEEeCCCCce
Q 005045 466 ALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHC------DTPIAHCDLKPSNVLLDKDMTA 539 (717)
Q Consensus 466 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~------~~~ivH~dlkp~NIll~~~~~~ 539 (717)
++|++|.+.|+|.+|++.+ .++|....+++..+++||+|||+.. .++|+|||||++||+|..++++
T Consensus 284 wLVt~fh~kGsL~dyL~~n--------tisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTc 355 (534)
T KOG3653|consen 284 WLVTEFHPKGSLCDYLKAN--------TISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTC 355 (534)
T ss_pred eEEeeeccCCcHHHHHHhc--------cccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcE
Confidence 9999999999999999864 5899999999999999999999765 3479999999999999999999
Q ss_pred EEeeeccchhcccccCCCCCCcceeecccccccccCCCccCCCCC-------cccchhhHHHHHHHHHhCCCCCCCCCCC
Q 005045 540 HVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNGQVS-------ILGDIYSYGILLLEMFTGKRPTGDMFKD 612 (717)
Q Consensus 540 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-------~~sDvwslG~vl~elltg~~p~~~~~~~ 612 (717)
.|+|||+|.++. .........+..||..|||||++.|... .+.||||+|.|+|||++.-.-+......
T Consensus 356 cIaDFGLAl~~~-----p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp 430 (534)
T KOG3653|consen 356 CIADFGLALRLE-----PGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVP 430 (534)
T ss_pred EeeccceeEEec-----CCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCC
Confidence 999999999874 2233334445789999999999988643 3479999999999999854433222222
Q ss_pred chhhhHHHHhcCCh---hhhhhc-CCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCC
Q 005045 613 DFSIHMFVSMALPD---HVMDIL-DPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTS 688 (717)
Q Consensus 613 ~~~~~~~~~~~~~~---~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~ 688 (717)
++...........+ .++..+ .++. ++..++.+.-......+.+.+..||+.|
T Consensus 431 ~Yqlpfe~evG~hPt~e~mq~~VV~kK~------------------------RP~~p~~W~~h~~~~~l~et~EeCWDhD 486 (534)
T KOG3653|consen 431 EYQLPFEAEVGNHPTLEEMQELVVRKKQ------------------------RPKIPDAWRKHAGMAVLCETIEECWDHD 486 (534)
T ss_pred cccCchhHHhcCCCCHHHHHHHHHhhcc------------------------CCCChhhhhcCccHHHHHHHHHHHcCCc
Confidence 22222221111111 122211 1111 1222233333345778899999999999
Q ss_pred cCCCCCHHHHHHHHHHHHHH
Q 005045 689 PRERIAMNVVVNNLKTIRNC 708 (717)
Q Consensus 689 p~~Rps~~eil~~l~~i~~~ 708 (717)
|+-|-||.-+.+++.++..-
T Consensus 487 aeARLTA~Cv~eR~~~l~~~ 506 (534)
T KOG3653|consen 487 AEARLTAGCVEERMAELMML 506 (534)
T ss_pred hhhhhhhHHHHHHHHHHhcc
Confidence 99999999999999887643
No 315
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=4.4e-33 Score=286.10 Aligned_cols=252 Identities=22% Similarity=0.319 Sum_probs=187.7
Q ss_pred cccccccccCcccccceEEEEeC-CCchhhhHHhHhhh-hhHHHHHHHHHHH-HhcCCCCceeEEEEeeccccCCCCceE
Q 005045 389 DNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQ-QGALKSFIDECNA-LKSTRHRNILRVITACSSVDLEGNDFK 465 (717)
Q Consensus 389 ~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~-l~~l~h~ni~~~~~~~~~~~~~~~~~~ 465 (717)
++|++.+.||+|+||.||+|+++ +|+.||+|.+.... ......+..|+.+ ++..+||||+++++.+. .++..
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~-----~~~~~ 75 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALF-----REGDV 75 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEe-----cCCcE
Confidence 47999999999999999999965 79999999886542 1222344455554 66679999999999864 34578
Q ss_pred EEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeec
Q 005045 466 ALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFG 545 (717)
Q Consensus 466 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg 545 (717)
+++|||++ ++|.+++..... ....+++..+..++.||+.|++|||+++ +++||||||+||+++.++.+||+|||
T Consensus 76 ~lv~e~~~-~~l~~~l~~~~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~~--~i~h~dlkp~nil~~~~~~~kl~dfg 149 (283)
T cd06617 76 WICMEVMD-TSLDKFYKKVYD---KGLTIPEDILGKIAVSIVKALEYLHSKL--SVIHRDVKPSNVLINRNGQVKLCDFG 149 (283)
T ss_pred EEEhhhhc-ccHHHHHHHhcc---CCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeecc
Confidence 99999996 688877754211 1146899999999999999999999852 89999999999999999999999999
Q ss_pred cchhcccccCCCCCCcceeecccccccccCCCccCC-----CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHH
Q 005045 546 LAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-----QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFV 620 (717)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-----~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~ 620 (717)
.+...... .......++..|+|||.+.+ .++.++|+|||||++|+|++|+.||..........
T Consensus 150 ~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~---- 217 (283)
T cd06617 150 ISGYLVDS--------VAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQL---- 217 (283)
T ss_pred cccccccc--------cccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHH----
Confidence 98765211 11122457888999998654 35789999999999999999999986432111111
Q ss_pred HhcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHH
Q 005045 621 SMALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVN 700 (717)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~ 700 (717)
........... ....++..+.+++.+||+.+|++|||+.++++
T Consensus 218 --------~~~~~~~~~~~-----------------------------~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~ 260 (283)
T cd06617 218 --------KQVVEEPSPQL-----------------------------PAEKFSPEFQDFVNKCLKKNYKERPNYPELLQ 260 (283)
T ss_pred --------HHHHhcCCCCC-----------------------------CccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 01110000000 00123566889999999999999999999986
No 316
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=1.7e-33 Score=294.16 Aligned_cols=209 Identities=23% Similarity=0.323 Sum_probs=166.9
Q ss_pred ccccccccCcccccceEEEEeC---CCchhhhHHhHhhh---hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCc
Q 005045 390 NFSKENLIGTGSFGSVYKGTLG---DGTIVAIKVLKLQQ---QGALKSFIDECNALKSTRHRNILRVITACSSVDLEGND 463 (717)
Q Consensus 390 ~y~~~~~ig~g~~g~v~~~~~~---~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~ 463 (717)
+|++.++||+|++|.||+|..+ +++.||+|.+.... ......+.+|+.++++++||||+++++.+... ...
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~---~~~ 77 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEH---ADK 77 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCC---CCc
Confidence 5889999999999999999964 47899999988632 33346677899999999999999999996432 236
Q ss_pred eEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCC----CCce
Q 005045 464 FKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDK----DMTA 539 (717)
Q Consensus 464 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~----~~~~ 539 (717)
..++||||++ +++.+++...... ....+++..+..++.||+.|++|||+. +++||||||+||+++. ++.+
T Consensus 78 ~~~lv~e~~~-~~l~~~~~~~~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~h~dlkp~Nil~~~~~~~~~~~ 151 (316)
T cd07842 78 SVYLLFDYAE-HDLWQIIKFHRQA--KRVSIPPSMVKSLLWQILNGVHYLHSN---WVLHRDLKPANILVMGEGPERGVV 151 (316)
T ss_pred eEEEEEeCCC-cCHHHHHHhhccC--CCcCcCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEEcCCCCccceE
Confidence 8999999996 5777766433211 113689999999999999999999997 9999999999999999 8999
Q ss_pred EEeeeccchhcccccCCCCCCcceeecccccccccCCCccCC--CCCcccchhhHHHHHHHHHhCCCCCCCCCC
Q 005045 540 HVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG--QVSILGDIYSYGILLLEMFTGKRPTGDMFK 611 (717)
Q Consensus 540 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~sDvwslG~vl~elltg~~p~~~~~~ 611 (717)
||+|||.+......... ........++..|+|||++.+ .++.++|||||||++|+|++|..||.....
T Consensus 152 kl~Dfg~~~~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~ 221 (316)
T cd07842 152 KIGDLGLARLFNAPLKP----LADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREA 221 (316)
T ss_pred EECCCccccccCCCccc----ccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcc
Confidence 99999998865222111 112223457888999998654 378999999999999999999999976543
No 317
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-33 Score=265.68 Aligned_cols=206 Identities=28% Similarity=0.405 Sum_probs=174.2
Q ss_pred ccccCcccccceEEEE-eCCCchhhhHHhHhhhhhHHHHHHHHHHHHhcC-CCCceeEEEEeeccccCCCCceEEEEEec
Q 005045 394 ENLIGTGSFGSVYKGT-LGDGTIVAIKVLKLQQQGALKSFIDECNALKST-RHRNILRVITACSSVDLEGNDFKALVFEF 471 (717)
Q Consensus 394 ~~~ig~g~~g~v~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~~~~~~~~~~lv~e~ 471 (717)
.+.+|+|+++.|-.++ .++|..+|||++.......+.+..+|++++.++ .|+||+.++++ +++++..|+|||.
T Consensus 83 ~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLief-----FEdd~~FYLVfEK 157 (463)
T KOG0607|consen 83 SELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEF-----FEDDTRFYLVFEK 157 (463)
T ss_pred HHHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHH-----hcccceEEEEEec
Confidence 4679999999999998 679999999999988767788999999999999 79999999999 7778899999999
Q ss_pred CCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCC---ceEEeeeccch
Q 005045 472 MSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDM---TAHVGDFGLAK 548 (717)
Q Consensus 472 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~---~~kl~Dfg~~~ 548 (717)
+.||+|...|+.+ .-+++.++..+.++|+.||++||.. ||.|||+||+||+..... -|||+||.++.
T Consensus 158 m~GGplLshI~~~-------~~F~E~EAs~vvkdia~aLdFlH~k---gIAHRDlKPENiLC~~pn~vsPvKiCDfDLgS 227 (463)
T KOG0607|consen 158 MRGGPLLSHIQKR-------KHFNEREASRVVKDIASALDFLHTK---GIAHRDLKPENILCESPNKVSPVKICDFDLGS 227 (463)
T ss_pred ccCchHHHHHHHh-------hhccHHHHHHHHHHHHHHHHHHhhc---CcccccCCccceeecCCCCcCceeeecccccc
Confidence 9999999999865 6799999999999999999999996 999999999999997544 58999998876
Q ss_pred hcccccCCCCCCcceeecccccccccCCCcc---CCC---CCcccchhhHHHHHHHHHhCCCCCCCCCCCch
Q 005045 549 FLFEISDNPSKNQTVSIGLKGSIGYIPPEHM---NGQ---VSILGDIYSYGILLLEMFTGKRPTGDMFKDDF 614 (717)
Q Consensus 549 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~---~~~---~~~~sDvwslG~vl~elltg~~p~~~~~~~~~ 614 (717)
-+....+-.......-....|+..|||||+. .++ |+.+.|.||||||+|-|++|.+||.+..+++.
T Consensus 228 g~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dC 299 (463)
T KOG0607|consen 228 GIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADC 299 (463)
T ss_pred ccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcC
Confidence 5432222112222233456789999999983 343 78999999999999999999999988765543
No 318
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=7.8e-33 Score=281.97 Aligned_cols=254 Identities=23% Similarity=0.342 Sum_probs=192.7
Q ss_pred ccccccccCcccccceEEEEeC--CCchhhhHHhHhh----------hhhHHHHHHHHHHHHhc-CCCCceeEEEEeecc
Q 005045 390 NFSKENLIGTGSFGSVYKGTLG--DGTIVAIKVLKLQ----------QQGALKSFIDECNALKS-TRHRNILRVITACSS 456 (717)
Q Consensus 390 ~y~~~~~ig~g~~g~v~~~~~~--~~~~vavK~~~~~----------~~~~~~~~~~e~~~l~~-l~h~ni~~~~~~~~~ 456 (717)
+|++.+.||+|++|.||.|.++ .++.+|+|.+... .......+..|+.++.+ ++||||+++++.+
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~-- 78 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTF-- 78 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeE--
Confidence 4889999999999999999965 4778999987532 22234556778888765 7999999999985
Q ss_pred ccCCCCceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCC
Q 005045 457 VDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKD 536 (717)
Q Consensus 457 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~ 536 (717)
..++..+++|||+++++|.+++..... ....+++..++.++.|++.|+.|||+. ++++||||+|+||+++.+
T Consensus 79 ---~~~~~~~lv~e~~~~~~l~~~l~~~~~---~~~~~~~~~~~~~~~~l~~~l~~lh~~--~~i~H~dl~~~nil~~~~ 150 (269)
T cd08528 79 ---LENDRLYIVMDLIEGAPLGEHFNSLKE---KKQRFTEERIWNIFVQMVLALRYLHKE--KRIVHRDLTPNNIMLGED 150 (269)
T ss_pred ---ccCCeEEEEEecCCCCcHHHHHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHhccC--CceeecCCCHHHEEECCC
Confidence 345689999999999999988753211 114689999999999999999999963 289999999999999999
Q ss_pred CceEEeeeccchhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchh
Q 005045 537 MTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFS 615 (717)
Q Consensus 537 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~ 615 (717)
+.++|+|||.+....... ......++..|+|||.+.+ .++.++||||||+++|+|++|..||.......
T Consensus 151 ~~~~l~dfg~~~~~~~~~--------~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~-- 220 (269)
T cd08528 151 DKVTITDFGLAKQKQPES--------KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLS-- 220 (269)
T ss_pred CcEEEecccceeeccccc--------ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHH--
Confidence 999999999987642111 2233457889999999654 48899999999999999999999986431110
Q ss_pred hhHHHHhcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCH
Q 005045 616 IHMFVSMALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAM 695 (717)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~ 695 (717)
... .+.+...... ....++..+.+++.+||+.+|++||++
T Consensus 221 ~~~-----------~~~~~~~~~~-----------------------------~~~~~~~~l~~li~~cl~~~p~~Rp~~ 260 (269)
T cd08528 221 LAT-----------KIVEAVYEPL-----------------------------PEGMYSEDVTDVITSCLTPDAEARPDI 260 (269)
T ss_pred HHH-----------HHhhccCCcC-----------------------------CcccCCHHHHHHHHHHCCCCCccCCCH
Confidence 000 0000000000 001124567899999999999999999
Q ss_pred HHHHHHHH
Q 005045 696 NVVVNNLK 703 (717)
Q Consensus 696 ~eil~~l~ 703 (717)
.|+.++++
T Consensus 261 ~e~~~~~~ 268 (269)
T cd08528 261 IQVSAMIS 268 (269)
T ss_pred HHHHHHhc
Confidence 99999875
No 319
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=2.4e-33 Score=295.13 Aligned_cols=285 Identities=19% Similarity=0.225 Sum_probs=201.8
Q ss_pred cccccccccccCcccccceEEEEeC-CCchhhhHHhHhh--hhhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCc
Q 005045 387 STDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQ--QQGALKSFIDECNALKSTRHRNILRVITACSSVDLEGND 463 (717)
Q Consensus 387 ~~~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~ 463 (717)
..++|.+.+.||+|++|.||.|... +++.||+|.+... .......+.+|+.+++.++|+||+++++++.........
T Consensus 3 ~~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~ 82 (337)
T cd07858 3 VDTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFN 82 (337)
T ss_pred cccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccC
Confidence 3568999999999999999999954 7899999987643 222345677899999999999999999876544333334
Q ss_pred eEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEee
Q 005045 464 FKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGD 543 (717)
Q Consensus 464 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~D 543 (717)
..++||||+. ++|.+++... ..+++..+..++.|++.||.|||+. +++||||+|+||+++.++.+||+|
T Consensus 83 ~~~lv~e~~~-~~L~~~~~~~-------~~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dlkp~Nil~~~~~~~kL~D 151 (337)
T cd07858 83 DVYIVYELMD-TDLHQIIRSS-------QTLSDDHCQYFLYQLLRGLKYIHSA---NVLHRDLKPSNLLLNANCDLKICD 151 (337)
T ss_pred cEEEEEeCCC-CCHHHHHhcC-------CCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECc
Confidence 6899999995 7899888754 5689999999999999999999997 999999999999999999999999
Q ss_pred eccchhcccccCCCCCCcceeecccccccccCCCccC--CCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHH-
Q 005045 544 FGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMN--GQVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFV- 620 (717)
Q Consensus 544 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~--~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~- 620 (717)
||.+....... .......++..|+|||.+. +.++.++|||||||++|+|++|..||....... ......
T Consensus 152 fg~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~~~~~~~ 223 (337)
T cd07858 152 FGLARTTSEKG-------DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVH-QLKLITE 223 (337)
T ss_pred CccccccCCCc-------ccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHH-HHHHHHH
Confidence 99987652111 1112345788999999854 358899999999999999999999996542111 000000
Q ss_pred -HhcCC-hhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHH
Q 005045 621 -SMALP-DHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVV 698 (717)
Q Consensus 621 -~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ei 698 (717)
....+ +.+..+.+. ...+..+.. ....+. ......++++..+.+++.+||+.+|++|||++|+
T Consensus 224 ~~~~~~~~~~~~~~~~-----------~~~~~~~~~--~~~~~~--~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~el 288 (337)
T cd07858 224 LLGSPSEEDLGFIRNE-----------KARRYIRSL--PYTPRQ--SFARLFPHANPLAIDLLEKMLVFDPSKRITVEEA 288 (337)
T ss_pred HhCCCChHHhhhcCch-----------hhhHHHHhc--Cccccc--CHHHHcccCCHHHHHHHHHHhcCChhhccCHHHH
Confidence 00000 001000000 000000000 000000 0001123456778999999999999999999999
Q ss_pred HHH--HHHH
Q 005045 699 VNN--LKTI 705 (717)
Q Consensus 699 l~~--l~~i 705 (717)
++. +..+
T Consensus 289 l~h~~~~~~ 297 (337)
T cd07858 289 LAHPYLASL 297 (337)
T ss_pred HcCcchhhh
Confidence 976 5443
No 320
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=2e-33 Score=295.51 Aligned_cols=283 Identities=20% Similarity=0.272 Sum_probs=200.6
Q ss_pred ccccccccccCcccccceEEEEeC-CCchhhhHHhHhhh--hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCce
Q 005045 388 TDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQ--QGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDF 464 (717)
Q Consensus 388 ~~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 464 (717)
.++|++.+.||+|++|.||.|..+ +|+.||+|++.... ......+.+|+.++++++||||+++.+.+.... .....
T Consensus 4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-~~~~~ 82 (334)
T cd07855 4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPG-ADFKD 82 (334)
T ss_pred hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccC-CCCce
Confidence 478999999999999999999965 79999999887532 234567778999999999999999988754332 34457
Q ss_pred EEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeee
Q 005045 465 KALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDF 544 (717)
Q Consensus 465 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Df 544 (717)
.++||||+. ++|.+++... ..+++..+..++.||+.||+|||+. +++||||||+||+++.++.+||+||
T Consensus 83 ~~lv~e~~~-~~l~~~~~~~-------~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~df 151 (334)
T cd07855 83 VYVVMDLME-SDLHHIIHSD-------QPLTEEHIRYFLYQLLRGLKYIHSA---NVIHRDLKPSNLLVNEDCELRIGDF 151 (334)
T ss_pred EEEEEehhh-hhHHHHhccC-------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEeccc
Confidence 899999995 6899988754 4589999999999999999999997 9999999999999999999999999
Q ss_pred ccchhcccccCCCCCCcceeecccccccccCCCccCC--CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHH--
Q 005045 545 GLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG--QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFV-- 620 (717)
Q Consensus 545 g~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~-- 620 (717)
|.+......... .........++..|+|||.+.+ .++.++|||||||++|+|++|..||........ .....
T Consensus 152 g~~~~~~~~~~~---~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~-~~~~~~~ 227 (334)
T cd07855 152 GMARGLSSSPTE---HKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQ-LKLILSV 227 (334)
T ss_pred ccceeecccCcC---CCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHH-HHHHHHH
Confidence 998765221111 1111223468889999999644 478999999999999999999999965432211 11000
Q ss_pred HhcCChhh-hhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHH
Q 005045 621 SMALPDHV-MDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVV 699 (717)
Q Consensus 621 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil 699 (717)
....+..+ ....+. .+.+.... ........-....++.+..+.+++.+||+.+|++|||++|++
T Consensus 228 ~g~~~~~~~~~~~~~-----------~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l 292 (334)
T cd07855 228 LGSPSEEVLNRIGSD-----------RVRKYIQN----LPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQAL 292 (334)
T ss_pred hCCChhHhhhhhchh-----------hHHHHHhh----cccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHH
Confidence 00111111 000000 00000000 000000000011123367789999999999999999999988
Q ss_pred HH
Q 005045 700 NN 701 (717)
Q Consensus 700 ~~ 701 (717)
+.
T Consensus 293 ~~ 294 (334)
T cd07855 293 QH 294 (334)
T ss_pred hC
Confidence 74
No 321
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=3.2e-33 Score=290.80 Aligned_cols=204 Identities=29% Similarity=0.382 Sum_probs=166.5
Q ss_pred ccccccccccccCcccccceEEEEeC-CCchhhhHHhHhhh--hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCC
Q 005045 386 KSTDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQ--QGALKSFIDECNALKSTRHRNILRVITACSSVDLEGN 462 (717)
Q Consensus 386 ~~~~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~ 462 (717)
...++|++.+.||+|++|.||+|.++ +|+.||+|.+.... ......+.+|+.++++++|+||+++++++... ..
T Consensus 4 ~~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~---~~ 80 (309)
T cd07845 4 RSVTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGK---HL 80 (309)
T ss_pred ccccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecC---CC
Confidence 35678999999999999999999965 78999999886442 22234566899999999999999999986432 23
Q ss_pred ceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEe
Q 005045 463 DFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVG 542 (717)
Q Consensus 463 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~ 542 (717)
+..++||||+. ++|.+++.... ..+++..+..++.||+.|++|||+. +++||||+|+||+++.++.+||+
T Consensus 81 ~~~~lv~e~~~-~~l~~~l~~~~------~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~kL~ 150 (309)
T cd07845 81 DSIFLVMEYCE-QDLASLLDNMP------TPFSESQVKCLMLQLLRGLQYLHEN---FIIHRDLKVSNLLLTDKGCLKIA 150 (309)
T ss_pred CeEEEEEecCC-CCHHHHHHhcc------cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEC
Confidence 46899999995 58888876532 4689999999999999999999998 99999999999999999999999
Q ss_pred eeccchhcccccCCCCCCcceeecccccccccCCCccCC--CCCcccchhhHHHHHHHHHhCCCCCCCC
Q 005045 543 DFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG--QVSILGDIYSYGILLLEMFTGKRPTGDM 609 (717)
Q Consensus 543 Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~sDvwslG~vl~elltg~~p~~~~ 609 (717)
|||.+....... .......++..|+|||.+.+ .++.++||||+||++|+|++|..||...
T Consensus 151 dfg~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~ 212 (309)
T cd07845 151 DFGLARTYGLPA-------KPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGK 212 (309)
T ss_pred ccceeeecCCcc-------CCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCC
Confidence 999988652111 11122335778999999754 3789999999999999999999999754
No 322
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=8.5e-33 Score=282.86 Aligned_cols=247 Identities=23% Similarity=0.378 Sum_probs=194.0
Q ss_pred cccccccccCcccccceEEEEeC-CCchhhhHHhHhhh-hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceEE
Q 005045 389 DNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQ-QGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFKA 466 (717)
Q Consensus 389 ~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~ 466 (717)
+-|++.+.||.|+||.||+|... +++.||+|...... ......+.+|++++++++||||+++++.+. .+...+
T Consensus 4 ~~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-----~~~~~~ 78 (277)
T cd06641 4 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYL-----KDTKLW 78 (277)
T ss_pred HhhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEE-----eCCeEE
Confidence 45788999999999999999854 78899999876432 334567889999999999999999999853 455899
Q ss_pred EEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeecc
Q 005045 467 LVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGL 546 (717)
Q Consensus 467 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~ 546 (717)
+||||+++++|.+++.. ..+++..+..++.|++.|+.|||+. +++|+||+|+||+++.++.++|+|||.
T Consensus 79 lv~e~~~~~~l~~~i~~--------~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~Ni~i~~~~~~~l~dfg~ 147 (277)
T cd06641 79 IIMEYLGGGSALDLLEP--------GPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGV 147 (277)
T ss_pred EEEEeCCCCcHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHccC---CeecCCCCHHhEEECCCCCEEEeeccc
Confidence 99999999999999864 3478999999999999999999997 999999999999999999999999998
Q ss_pred chhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHHHhcCC
Q 005045 547 AKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVSMALP 625 (717)
Q Consensus 547 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 625 (717)
+...... ........++..|+|||.+.+ .++.++|+|||||++|+|++|..||....... ......
T Consensus 148 ~~~~~~~-------~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~--~~~~~~---- 214 (277)
T cd06641 148 AGQLTDT-------QIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMK--VLFLIP---- 214 (277)
T ss_pred ceecccc-------hhhhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHH--HHHHHh----
Confidence 8654211 111122457888999999654 57889999999999999999999986532211 000000
Q ss_pred hhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHHH
Q 005045 626 DHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVNN 701 (717)
Q Consensus 626 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~~ 701 (717)
....+. ....++..+.+++.+|++.+|++||+++++++.
T Consensus 215 ----~~~~~~---------------------------------~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 253 (277)
T cd06641 215 ----KNNPPT---------------------------------LEGNYSKPLKEFVEACLNKEPSFRPTAKELLKH 253 (277)
T ss_pred ----cCCCCC---------------------------------CCcccCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 000000 011225567889999999999999999999984
No 323
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=4.6e-33 Score=290.44 Aligned_cols=284 Identities=19% Similarity=0.200 Sum_probs=190.2
Q ss_pred cccccCcccccceEEEEeC-CCchhhhHHhHhh--hhhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceEEEEE
Q 005045 393 KENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQ--QQGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFKALVF 469 (717)
Q Consensus 393 ~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~lv~ 469 (717)
+.+.+|.| +.||.++.. +++.||+|++... .......+..|+++++.++|+||+++++++ ...+..+++|
T Consensus 6 i~~~~~~~--~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~-----~~~~~~~~~~ 78 (314)
T cd08216 6 IGKCFEDL--MIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSF-----IVDSELYVVS 78 (314)
T ss_pred hhHhhcCC--ceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhhee-----ecCCeEEEEE
Confidence 34444444 445555533 7899999998754 344567899999999999999999999984 3455889999
Q ss_pred ecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeeccchh
Q 005045 470 EFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKF 549 (717)
Q Consensus 470 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~ 549 (717)
||++++++.+++..... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.+..
T Consensus 79 e~~~~~~l~~~l~~~~~-----~~~~~~~~~~~~~~l~~~L~~LH~~---~ivH~dlk~~Nili~~~~~~kl~d~~~~~~ 150 (314)
T cd08216 79 PLMAYGSCEDLLKTHFP-----EGLPELAIAFILKDVLNALDYIHSK---GFIHRSVKASHILLSGDGKVVLSGLRYSVS 150 (314)
T ss_pred eccCCCCHHHHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCcceEEEecCCceEEecCcccee
Confidence 99999999999875421 4578899999999999999999998 999999999999999999999999998876
Q ss_pred cccccCCCCCCcceeecccccccccCCCccCC---CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHHHhcCCh
Q 005045 550 LFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG---QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVSMALPD 626 (717)
Q Consensus 550 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~---~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 626 (717)
...................++..|+|||++.+ .++.++|||||||++|+|++|..||........ ..+......+.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~-~~~~~~~~~~~ 229 (314)
T cd08216 151 MIKHGKRQRVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQM-LLEKVRGTVPC 229 (314)
T ss_pred eccccccccccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHhccCcc
Confidence 53322211111222233457788999999754 378899999999999999999999976532211 11111111111
Q ss_pred hhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHHH
Q 005045 627 HVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVNN 701 (717)
Q Consensus 627 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~~ 701 (717)
.+....-+............... .. ................+.+++.+||+++|++|||++|+++.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~----~~-----~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 295 (314)
T cd08216 230 LLDKSTYPLYEDSMSQSRSSNEH----PN-----NRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNH 295 (314)
T ss_pred ccccCchhhhcCCcCcccccccc----cc-----hhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcC
Confidence 11000000000000000000000 00 00000001122235568899999999999999999999963
No 324
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=5.9e-33 Score=285.07 Aligned_cols=247 Identities=23% Similarity=0.324 Sum_probs=193.1
Q ss_pred ccccccccCcccccceEEEEeC-CCchhhhHHhHhhhhhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceEEEE
Q 005045 390 NFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFKALV 468 (717)
Q Consensus 390 ~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~lv 468 (717)
+|...++||+|++|.||.+..+ +++.+++|.+........+.+.+|+.+++.+.||||+++++.+. ..+..+++
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~-----~~~~~~~v 94 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYL-----VGDELWVV 94 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEE-----cCCeEEEE
Confidence 5666789999999999999954 78889999886554444567889999999999999999999853 45588999
Q ss_pred EecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeeccch
Q 005045 469 FEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAK 548 (717)
Q Consensus 469 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~ 548 (717)
+||+++++|.+++.. ..+++..+..++.|++.|++|||++ +++||||+|+||+++.++.++|+|||.+.
T Consensus 95 ~e~~~~~~L~~~~~~--------~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~d~g~~~ 163 (285)
T cd06648 95 MEFLEGGALTDIVTH--------TRMNEEQIATVCLAVLKALSFLHAQ---GVIHRDIKSDSILLTSDGRVKLSDFGFCA 163 (285)
T ss_pred EeccCCCCHHHHHHh--------CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChhhEEEcCCCcEEEcccccch
Confidence 999999999999864 3478899999999999999999998 99999999999999999999999999876
Q ss_pred hcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHHHhcCChh
Q 005045 549 FLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVSMALPDH 627 (717)
Q Consensus 549 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 627 (717)
.... .........|+..|+|||...+ .++.++|||||||++|+|++|..||...... .......
T Consensus 164 ~~~~-------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~--~~~~~~~------ 228 (285)
T cd06648 164 QVSK-------EVPRRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPL--QAMKRIR------ 228 (285)
T ss_pred hhcc-------CCcccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHH--HHHHHHH------
Confidence 5411 1111223457889999999655 4789999999999999999999998643211 0000000
Q ss_pred hhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHH
Q 005045 628 VMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVN 700 (717)
Q Consensus 628 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~ 700 (717)
....+... ....++..+.+++.+||+.+|++|||+.|+++
T Consensus 229 --~~~~~~~~-------------------------------~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 268 (285)
T cd06648 229 --DNLPPKLK-------------------------------NLHKVSPRLRSFLDRMLVRDPAQRATAAELLN 268 (285)
T ss_pred --hcCCCCCc-------------------------------ccccCCHHHHHHHHHHcccChhhCcCHHHHcc
Confidence 00000000 01112456889999999999999999999986
No 325
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=7e-33 Score=289.95 Aligned_cols=287 Identities=23% Similarity=0.293 Sum_probs=205.3
Q ss_pred cccccccccCcccccceEEEEe-CCCchhhhHHhHhhh-hhHHHHHHHHHHHHhcCCCCceeEEEEeecccc-CCCCceE
Q 005045 389 DNFSKENLIGTGSFGSVYKGTL-GDGTIVAIKVLKLQQ-QGALKSFIDECNALKSTRHRNILRVITACSSVD-LEGNDFK 465 (717)
Q Consensus 389 ~~y~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~-~~~~~~~ 465 (717)
..|..-+.+|+||||.||++++ ++|+.||||.+.... ...+++..+|++++++++|+|||+.++.-.... ..-.+..
T Consensus 13 y~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~ 92 (732)
T KOG4250|consen 13 YLWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLP 92 (732)
T ss_pred cceeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccc
Confidence 3566778899999999999995 499999999998643 344677889999999999999999988743322 1124467
Q ss_pred EEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeC--CCC--ceEE
Q 005045 466 ALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLD--KDM--TAHV 541 (717)
Q Consensus 466 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~--~~~--~~kl 541 (717)
.+|||||+||+|+..+++... ...+++.+.+.+..+++.||.|||++ |||||||||.||++- .+| .-||
T Consensus 93 vlvmEyC~gGsL~~~L~~PEN----~~GLpE~e~l~lL~d~~~al~~LrEn---~IvHRDlKP~NIvl~~Gedgq~IyKL 165 (732)
T KOG4250|consen 93 VLVMEYCSGGSLRKVLNSPEN----AYGLPESEFLDLLSDLVSALRHLREN---GIVHRDLKPGNIVLQIGEDGQSIYKL 165 (732)
T ss_pred eEEEeecCCCcHHHHhcCccc----ccCCCHHHHHHHHHHHHHHHHHHHHc---CceeccCCCCcEEEeecCCCceEEee
Confidence 899999999999999986542 26799999999999999999999998 999999999999994 334 5799
Q ss_pred eeeccchhcccccCCCCCCcceeecccccccccCCCccC--CCCCcccchhhHHHHHHHHHhCCCCCCCCCCC--chhhh
Q 005045 542 GDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMN--GQVSILGDIYSYGILLLEMFTGKRPTGDMFKD--DFSIH 617 (717)
Q Consensus 542 ~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~--~~~~~~sDvwslG~vl~elltg~~p~~~~~~~--~~~~~ 617 (717)
+|||.|+.. .+........||..|.+||+.. +.++..+|.|||||++||+.||..||-..... .....
T Consensus 166 tDfG~Arel--------~d~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~ 237 (732)
T KOG4250|consen 166 TDFGAAREL--------DDNSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIM 237 (732)
T ss_pred ecccccccC--------CCCCeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchhh
Confidence 999999976 2223556688999999999976 56899999999999999999999999655333 22233
Q ss_pred HHHHhcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCC--CH
Q 005045 618 MFVSMALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERI--AM 695 (717)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp--s~ 695 (717)
+.....-|..+.-...+.......+.+ .+..+.. ...--...+...+..++.++|++|. ..
T Consensus 238 ~~~~tkkp~~v~i~~~~~eNgpv~~s~--------------~lP~p~~---Ls~~l~~~~~kwLa~~L~~~~~~~~~~~~ 300 (732)
T KOG4250|consen 238 WHIITKKPSGVAIGAQEEENGPVEWSS--------------TLPQPNH---LSRGLATRLTKWLASMLEWNPRKRGHEGF 300 (732)
T ss_pred hhhhccCCCceeEeeecccCCceeeec--------------cCCCccc---ccHHHHhhhhHHHHHHHhhhHHHhCCCCc
Confidence 333333333333333322221110000 0000000 1111133445566667777888888 77
Q ss_pred HHHHHHHHHHHH
Q 005045 696 NVVVNNLKTIRN 707 (717)
Q Consensus 696 ~eil~~l~~i~~ 707 (717)
.+....+..|..
T Consensus 301 ~~~Fa~~~dIL~ 312 (732)
T KOG4250|consen 301 DRFFAEVDDILN 312 (732)
T ss_pred chHHHHHHHHHh
Confidence 777766666653
No 326
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-33 Score=274.20 Aligned_cols=283 Identities=19% Similarity=0.276 Sum_probs=202.8
Q ss_pred cccccccccccCcccccceEEEEeC-CCchhhhHHhHhhhhhHHHHHHHHHHHHhcCC--CCc----eeEEEEeeccccC
Q 005045 387 STDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQQGALKSFIDECNALKSTR--HRN----ILRVITACSSVDL 459 (717)
Q Consensus 387 ~~~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~--h~n----i~~~~~~~~~~~~ 459 (717)
..++|.+...+|+|.||.|-.+.+. .+..||+|+++... ..++...-|+++++++. -|+ ++.+.++ +
T Consensus 87 l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~-kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~w-----F 160 (415)
T KOG0671|consen 87 LTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVD-KYREAALIEIEVLQKINESDPNGKFRCVQMRDW-----F 160 (415)
T ss_pred cccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHH-HHhhHHHHHHHHHHHHHhcCCCCceEEEeeehh-----h
Confidence 4889999999999999999999954 68899999998654 23456677999999983 222 4555555 5
Q ss_pred CCCceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCC----
Q 005045 460 EGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDK---- 535 (717)
Q Consensus 460 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~---- 535 (717)
+..++.|||+|.+ |.+++|++..+. +..++...++.++.|+++++++||+. +++|.||||+||++..
T Consensus 161 dyrghiCivfell-G~S~~dFlk~N~-----y~~fpi~~ir~m~~QL~~sv~fLh~~---kl~HTDLKPENILfvss~~~ 231 (415)
T KOG0671|consen 161 DYRGHICIVFELL-GLSTFDFLKENN-----YIPFPIDHIRHMGYQLLESVAFLHDL---KLTHTDLKPENILFVSSEYF 231 (415)
T ss_pred hccCceEEEEecc-ChhHHHHhccCC-----ccccchHHHHHHHHHHHHHHHHHHhc---ceeecCCChheEEEeccceE
Confidence 6678999999998 779999998763 37799999999999999999999998 9999999999999942
Q ss_pred ----------------CCceEEeeeccchhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHH
Q 005045 536 ----------------DMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLE 598 (717)
Q Consensus 536 ----------------~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~e 598 (717)
+..++++|||.|.+-.+ .......|..|+|||++.| .|++.+||||+||||+|
T Consensus 232 ~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e----------~hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~E 301 (415)
T KOG0671|consen 232 KTYNPKKKVCFIRPLKSTAIKVIDFGSATFDHE----------HHSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVE 301 (415)
T ss_pred EEeccCCccceeccCCCcceEEEecCCcceecc----------CcceeeeccccCCchheeccCcCCccCceeeeeEEEE
Confidence 23689999999986411 1234678999999999766 79999999999999999
Q ss_pred HHhCCCCCCCCCC-CchhhhHHHHhcCChhhhh-h-----cCC-CCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhh
Q 005045 599 MFTGKRPTGDMFK-DDFSIHMFVSMALPDHVMD-I-----LDP-SMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKL 670 (717)
Q Consensus 599 lltg~~p~~~~~~-~~~~~~~~~~~~~~~~~~~-~-----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 670 (717)
++||...|..... +...+.+.+...+|..+.. . ... ++.++............ +.--+++..+. ..
T Consensus 302 lytG~~LFqtHen~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~---~~ckpl~~~~~---~~ 375 (415)
T KOG0671|consen 302 LYTGETLFQTHENLEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVF---EPCKPLKKYML---QD 375 (415)
T ss_pred eeccceecccCCcHHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhh---cCCccHHHHhc---cC
Confidence 9999999987652 2222333333344443211 1 111 11111111000001111 11111111111 22
Q ss_pred HHHHHHHHHHhhccCCCCcCCCCCHHHHHH
Q 005045 671 EECFVSVLRIGLMCSTTSPRERIAMNVVVN 700 (717)
Q Consensus 671 ~~~~~~l~~li~~cl~~~p~~Rps~~eil~ 700 (717)
.....+|++|+++||..||.+|+|++|++.
T Consensus 376 d~e~~~LfDLl~~mL~fDP~~RiTl~EAL~ 405 (415)
T KOG0671|consen 376 DLEHVQLFDLLRRMLEFDPARRITLREALS 405 (415)
T ss_pred cHHHhHHHHHHHHHHccCccccccHHHHhc
Confidence 233567999999999999999999999985
No 327
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=1.2e-32 Score=282.99 Aligned_cols=271 Identities=22% Similarity=0.313 Sum_probs=195.4
Q ss_pred ccccccccCcccccceEEEEeC-CCchhhhHHhHhhh-hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceEEE
Q 005045 390 NFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQ-QGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFKAL 467 (717)
Q Consensus 390 ~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~l 467 (717)
+|++.++||.|++|.||+|+.+ +|+.||+|.+.... ......+.+|++++++++|+||+++++.+. ..+..++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-----~~~~~~l 75 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIH-----TENKLML 75 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEe-----eCCcEEE
Confidence 5899999999999999999975 78999999887543 223466778999999999999999999954 3457899
Q ss_pred EEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeeccc
Q 005045 468 VFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLA 547 (717)
Q Consensus 468 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~ 547 (717)
||||++ +++.+++..... ...+++..+..++.|++.|++|||+. +++||||+|+||+++.++.++|+|||.+
T Consensus 76 v~e~~~-~~l~~~~~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~h~dl~p~ni~~~~~~~~~l~d~g~~ 147 (284)
T cd07836 76 VFEYMD-KDLKKYMDTHGV----RGALDPNTVKSFTYQLLKGIAFCHEN---RVLHRDLKPQNLLINKRGELKLADFGLA 147 (284)
T ss_pred EEecCC-ccHHHHHHhcCC----CCCcCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCcEEEeecchh
Confidence 999997 488888764421 14589999999999999999999997 9999999999999999999999999998
Q ss_pred hhcccccCCCCCCcceeecccccccccCCCccCC--CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHHHh---
Q 005045 548 KFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG--QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVSM--- 622 (717)
Q Consensus 548 ~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~--- 622 (717)
....... .......++..|+|||.+.+ .++.++|||||||++|+|++|..||......+. .......
T Consensus 148 ~~~~~~~-------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~-~~~~~~~~~~ 219 (284)
T cd07836 148 RAFGIPV-------NTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQ-LLKIFRIMGT 219 (284)
T ss_pred hhhcCCc-------cccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHH-HHHHHHHhCC
Confidence 7542110 11112346788999999654 368899999999999999999999976533211 1111110
Q ss_pred cCChhhhhhcCCC-CCCCC-CCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHH
Q 005045 623 ALPDHVMDILDPS-MPLDE-ENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVN 700 (717)
Q Consensus 623 ~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~ 700 (717)
.....+..+.+.. ..... ....... ....+.++..+.+++.+|++.+|++||+++|+++
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 280 (284)
T cd07836 220 PTESTWPGISQLPEYKPTFPRYPPQDL-------------------QQLFPHADPLGIDLLHRLLQLNPELRISAHDALQ 280 (284)
T ss_pred CChhhHHHHhcCchhcccccCCChHHH-------------------HHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 0001111111000 00000 0000000 0111233667889999999999999999999985
No 328
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=1.2e-32 Score=282.83 Aligned_cols=270 Identities=22% Similarity=0.246 Sum_probs=191.2
Q ss_pred cccccccCcccccceEEEEeC-CCchhhhHHhHhhh-hhHHHHHHHHHHHHhcCC-CCceeEEEEeeccccCCCCceEEE
Q 005045 391 FSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQ-QGALKSFIDECNALKSTR-HRNILRVITACSSVDLEGNDFKAL 467 (717)
Q Consensus 391 y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~-h~ni~~~~~~~~~~~~~~~~~~~l 467 (717)
|++.+++|+|++|.||+|... +++.||+|.+.... ........+|+.+++++. |+|++++++.+.+. ..+..++
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~---~~~~~~l 77 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDR---KTGRLAL 77 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecC---CCCcEEE
Confidence 678899999999999999955 78899999887542 222234457888888884 99999999986432 2257899
Q ss_pred EEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeeccc
Q 005045 468 VFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLA 547 (717)
Q Consensus 468 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~ 547 (717)
||||++ +++.+++.... ..+++..+..++.|++.||+|||+. +++||||+|+||+++. +.+||+|||.+
T Consensus 78 v~e~~~-~~l~~~l~~~~------~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~p~ni~l~~-~~~kl~dfg~~ 146 (282)
T cd07831 78 VFELMD-MNLYELIKGRK------RPLPEKRVKSYMYQLLKSLDHMHRN---GIFHRDIKPENILIKD-DILKLADFGSC 146 (282)
T ss_pred EEecCC-ccHHHHHHhcc------CCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEcC-CCeEEEecccc
Confidence 999996 58888776432 4689999999999999999999997 9999999999999999 99999999998
Q ss_pred hhcccccCCCCCCcceeecccccccccCCCcc-C-CCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHHHh---
Q 005045 548 KFLFEISDNPSKNQTVSIGLKGSIGYIPPEHM-N-GQVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVSM--- 622 (717)
Q Consensus 548 ~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~-~-~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~--- 622 (717)
...... .......++..|+|||.+ . +.++.++||||+||++|+|++|..||......+ .......
T Consensus 147 ~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~--~~~~~~~~~~ 216 (282)
T cd07831 147 RGIYSK--------PPYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELD--QIAKIHDVLG 216 (282)
T ss_pred cccccC--------CCcCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHH--HHHHHHHHcC
Confidence 765211 111223478899999974 3 346899999999999999999999997643221 1111111
Q ss_pred cCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHH
Q 005045 623 ALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVN 700 (717)
Q Consensus 623 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~ 700 (717)
..++.+................. ............+..+.+++.+||+.+|++|||++|+++
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~ 278 (282)
T cd07831 217 TPDAEVLKKFRKSRHMNYNFPSK----------------KGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALR 278 (282)
T ss_pred CCCHHHHHhhcccccccccCccc----------------ccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhh
Confidence 11111111111111000000000 000000112234678899999999999999999999986
No 329
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=1.5e-32 Score=278.96 Aligned_cols=252 Identities=21% Similarity=0.299 Sum_probs=193.2
Q ss_pred cccccccccCcccccceEEEEeC-CCchhhhHHhHhh-----hhhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCC
Q 005045 389 DNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQ-----QQGALKSFIDECNALKSTRHRNILRVITACSSVDLEGN 462 (717)
Q Consensus 389 ~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~-----~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~ 462 (717)
.+|++.+.||+|++|.||.|.++ +++.||+|.+... .......+.+|++++++++|+||+++++.+... ..
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~---~~ 78 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDP---EE 78 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcC---CC
Confidence 47999999999999999999965 7899999986432 233456888999999999999999999986432 23
Q ss_pred ceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEe
Q 005045 463 DFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVG 542 (717)
Q Consensus 463 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~ 542 (717)
...+++|||+++++|.+++... ..+++..+..++.|++.|+.|||+. +++|+||+|+||+++.++.++|+
T Consensus 79 ~~~~~v~e~~~~~~L~~~~~~~-------~~l~~~~~~~~~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~ 148 (264)
T cd06653 79 KKLSIFVEYMPGGSIKDQLKAY-------GALTENVTRRYTRQILQGVSYLHSN---MIVHRDIKGANILRDSAGNVKLG 148 (264)
T ss_pred CEEEEEEEeCCCCcHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEEC
Confidence 5688999999999999998754 4578889999999999999999998 99999999999999999999999
Q ss_pred eeccchhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHHH
Q 005045 543 DFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVS 621 (717)
Q Consensus 543 Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~ 621 (717)
|||.+........ .........++..|+|||.+.+ .++.++|+|||||++|+|++|..||....... .......
T Consensus 149 dfg~~~~~~~~~~----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~ 223 (264)
T cd06653 149 DFGASKRIQTICM----SGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMA-AIFKIAT 223 (264)
T ss_pred ccccccccccccc----cCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHH-HHHHHHc
Confidence 9999886521110 0111123458889999999765 47899999999999999999999996531111 0000000
Q ss_pred hcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHH
Q 005045 622 MALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVN 700 (717)
Q Consensus 622 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~ 700 (717)
....+.+ +......+.+++.+|++ +|..|||+.+++.
T Consensus 224 --------~~~~~~~---------------------------------p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~ 260 (264)
T cd06653 224 --------QPTKPML---------------------------------PDGVSDACRDFLKQIFV-EEKRRPTAEFLLR 260 (264)
T ss_pred --------CCCCCCC---------------------------------CcccCHHHHHHHHHHhc-CcccCccHHHHhc
Confidence 0000111 11225567899999999 5799999998875
No 330
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=1.1e-32 Score=282.13 Aligned_cols=241 Identities=21% Similarity=0.288 Sum_probs=180.9
Q ss_pred ccCcccccceEEEEeC-CCchhhhHHhHhhh---hhHHHHHHHHHH---HHhcCCCCceeEEEEeeccccCCCCceEEEE
Q 005045 396 LIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQ---QGALKSFIDECN---ALKSTRHRNILRVITACSSVDLEGNDFKALV 468 (717)
Q Consensus 396 ~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~---~l~~l~h~ni~~~~~~~~~~~~~~~~~~~lv 468 (717)
.||+|+||.||++... +++.+|+|.+.... ......+.+|.. ++....||+|+.+++.+ ...+..++|
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-----~~~~~~~lv 75 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAF-----HTPDKLCFI 75 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEE-----ecCCeEEEE
Confidence 4899999999999965 78899999875432 111223334443 33345799999998884 344588999
Q ss_pred EecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeeccch
Q 005045 469 FEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAK 548 (717)
Q Consensus 469 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~ 548 (717)
|||+++++|.+++... ..+++..+..++.|++.|++|||+. +++||||||+||+++.++.++|+|||.+.
T Consensus 76 ~e~~~~~~L~~~i~~~-------~~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dikp~Nil~~~~~~~~l~dfg~~~ 145 (279)
T cd05633 76 LDLMNGGDLHYHLSQH-------GVFSEKEMRFYATEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLAC 145 (279)
T ss_pred EecCCCCCHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CcCCCCCCHHHEEECCCCCEEEccCCcce
Confidence 9999999999988754 5689999999999999999999997 99999999999999999999999999986
Q ss_pred hcccccCCCCCCcceeecccccccccCCCccC-C-CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHHHhcCCh
Q 005045 549 FLFEISDNPSKNQTVSIGLKGSIGYIPPEHMN-G-QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVSMALPD 626 (717)
Q Consensus 549 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~-~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 626 (717)
..... ......|+..|+|||... + .++.++||||+||++|+|++|..||................
T Consensus 146 ~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~---- 212 (279)
T cd05633 146 DFSKK---------KPHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTL---- 212 (279)
T ss_pred ecccc---------CccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHHHhh----
Confidence 54111 112245889999999964 3 37899999999999999999999997543322111000000
Q ss_pred hhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCC-----CHHHHHHH
Q 005045 627 HVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERI-----AMNVVVNN 701 (717)
Q Consensus 627 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp-----s~~eil~~ 701 (717)
..... .++.++..+.+++.+|++.+|++|| |++|+++.
T Consensus 213 ----~~~~~---------------------------------~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h 255 (279)
T cd05633 213 ----TVNVE---------------------------------LPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEH 255 (279)
T ss_pred ----cCCcC---------------------------------CccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhC
Confidence 00000 1122356778999999999999999 69999874
No 331
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=6.5e-33 Score=285.58 Aligned_cols=257 Identities=23% Similarity=0.306 Sum_probs=189.6
Q ss_pred cccccccccCcccccceEEEEeC-CCchhhhHHhHhhh-hhHHHHHHHHHHHHhcCC-CCceeEEEEeeccccCCCCceE
Q 005045 389 DNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQ-QGALKSFIDECNALKSTR-HRNILRVITACSSVDLEGNDFK 465 (717)
Q Consensus 389 ~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~-h~ni~~~~~~~~~~~~~~~~~~ 465 (717)
++|...+.||+|++|.||++.+. +++.||+|.+.... ......+.+|+.++.++. |+||+++++.+. .++..
T Consensus 4 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~-----~~~~~ 78 (288)
T cd06616 4 EDLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALF-----REGDC 78 (288)
T ss_pred HHhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEe-----cCCcE
Confidence 46778899999999999999965 78999999887542 234567889999999995 999999999853 34578
Q ss_pred EEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeec
Q 005045 466 ALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFG 545 (717)
Q Consensus 466 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg 545 (717)
+++|||++ +++.++...... .....+++..+..++.+++.|++|||+. .+++||||||+||+++.++.++|+|||
T Consensus 79 ~~~~e~~~-~~l~~l~~~~~~--~~~~~l~~~~~~~i~~~i~~~l~~lh~~--~~i~H~dlkp~Nil~~~~~~~kl~dfg 153 (288)
T cd06616 79 WICMELMD-ISLDKFYKYVYE--VLKSVIPEEILGKIAVATVKALNYLKEE--LKIIHRDVKPSNILLDRNGNIKLCDFG 153 (288)
T ss_pred EEEEeccc-CCHHHHHHHHHH--hhcCCCCHHHHHHHHHHHHHHHHHHhhc--CCeeccCCCHHHEEEccCCcEEEeecc
Confidence 99999985 566554321000 0115689999999999999999999974 289999999999999999999999999
Q ss_pred cchhcccccCCCCCCcceeecccccccccCCCccCC----CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHHH
Q 005045 546 LAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG----QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVS 621 (717)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~----~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~ 621 (717)
++....... ......++..|+|||.+.+ .++.++||||+||++|+|++|..||..... ......
T Consensus 154 ~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~----~~~~~~ 221 (288)
T cd06616 154 ISGQLVDSI--------AKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNS----VFDQLT 221 (288)
T ss_pred hhHHhccCC--------ccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcch----HHHHHh
Confidence 987652111 1122347888999999654 378999999999999999999999965421 100000
Q ss_pred hcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHHH
Q 005045 622 MALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVNN 701 (717)
Q Consensus 622 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~~ 701 (717)
..... ..+.+... ...+++..+.+++.+||+.+|++|||++||++.
T Consensus 222 ~~~~~-----~~~~~~~~-----------------------------~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~ 267 (288)
T cd06616 222 QVVKG-----DPPILSNS-----------------------------EEREFSPSFVNFINLCLIKDESKRPKYKELLEH 267 (288)
T ss_pred hhcCC-----CCCcCCCc-----------------------------CCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00000 00011000 012235678999999999999999999999864
No 332
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=1e-32 Score=285.17 Aligned_cols=208 Identities=25% Similarity=0.348 Sum_probs=165.2
Q ss_pred cccccccccCcccccceEEEEeC-CCchhhhHHhHhhh--hhHHHHHHHHHHHHhcCC-CCceeEEEEeeccccCCCCce
Q 005045 389 DNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQ--QGALKSFIDECNALKSTR-HRNILRVITACSSVDLEGNDF 464 (717)
Q Consensus 389 ~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~-h~ni~~~~~~~~~~~~~~~~~ 464 (717)
++|++.+.||+|++|.||+|.+. +++.||+|...... ......+.+|+.+++.+. |+||+++++++..........
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 47999999999999999999965 78999999876542 223456788999999994 699999998865443222334
Q ss_pred EEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCC-CCceEEee
Q 005045 465 KALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDK-DMTAHVGD 543 (717)
Q Consensus 465 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~-~~~~kl~D 543 (717)
.++||||+++ ++.+++...... ....+++..++.++.||+.||.|||+. +++||||+|+||+++. ++.+||+|
T Consensus 81 ~~lv~e~~~~-~l~~~~~~~~~~--~~~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~~~nil~~~~~~~~kl~d 154 (295)
T cd07837 81 LYLVFEYLDS-DLKKFMDSNGRG--PGRPLPAKTIKSFMYQLLKGVAHCHKH---GVMHRDLKPQNLLVDKQKGLLKIAD 154 (295)
T ss_pred EEEEeeccCc-CHHHHHHHhccc--CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEecCCCeEEEee
Confidence 8999999975 888887643211 114579999999999999999999997 9999999999999998 88999999
Q ss_pred eccchhcccccCCCCCCcceeecccccccccCCCccCC--CCCcccchhhHHHHHHHHHhCCCCCCCC
Q 005045 544 FGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG--QVSILGDIYSYGILLLEMFTGKRPTGDM 609 (717)
Q Consensus 544 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~sDvwslG~vl~elltg~~p~~~~ 609 (717)
||.+...... ........+++.|+|||++.+ .++.++|||||||++|+|++|..||...
T Consensus 155 fg~~~~~~~~-------~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~ 215 (295)
T cd07837 155 LGLGRAFSIP-------VKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGD 215 (295)
T ss_pred cccceecCCC-------ccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCC
Confidence 9998754211 111122346788999998644 3689999999999999999999999754
No 333
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=1.5e-32 Score=283.61 Aligned_cols=276 Identities=22% Similarity=0.273 Sum_probs=192.3
Q ss_pred cccccccccCcccccceEEEEeC-CCchhhhHHhHhhh--hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceE
Q 005045 389 DNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQ--QGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFK 465 (717)
Q Consensus 389 ~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~ 465 (717)
++|++.+.||+|++|.||+|.++ +++.||+|.+.... ......+.+|++++++++||||+++++++. .....
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~ 76 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVH-----SEKRL 76 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEe-----cCCeE
Confidence 57999999999999999999965 78899999886542 233466788999999999999999999953 45689
Q ss_pred EEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCC-CCceEEeee
Q 005045 466 ALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDK-DMTAHVGDF 544 (717)
Q Consensus 466 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~-~~~~kl~Df 544 (717)
++||||++ +++.+++..... ..+++..+..++.||+.||+|||+. +++||||+|+||+++. ++.+||+||
T Consensus 77 ~lv~e~~~-~~l~~~~~~~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dl~p~nill~~~~~~~kl~df 147 (294)
T PLN00009 77 YLVFEYLD-LDLKKHMDSSPD-----FAKNPRLIKTYLYQILRGIAYCHSH---RVLHRDLKPQNLLIDRRTNALKLADF 147 (294)
T ss_pred EEEEeccc-ccHHHHHHhCCC-----CCcCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCcceEEEECCCCEEEEccc
Confidence 99999995 588887754321 3467888899999999999999997 9999999999999985 557999999
Q ss_pred ccchhcccccCCCCCCcceeecccccccccCCCccCC--CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHHHh
Q 005045 545 GLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG--QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVSM 622 (717)
Q Consensus 545 g~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~ 622 (717)
|.+...... ........++..|+|||.+.+ .++.++||||+||++|+|++|..||......+. ..... .
T Consensus 148 g~~~~~~~~-------~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~-~~~~~-~ 218 (294)
T PLN00009 148 GLARAFGIP-------VRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDE-LFKIF-R 218 (294)
T ss_pred ccccccCCC-------ccccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHH-H
Confidence 998754111 111122346789999998654 368999999999999999999999975432211 11100 0
Q ss_pred cCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHH
Q 005045 623 ALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVN 700 (717)
Q Consensus 623 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~ 700 (717)
.........+..... ..+.. ...............+..+.++.+++.+|++.+|++||++.|+++
T Consensus 219 ~~~~~~~~~~~~~~~---------~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~ 283 (294)
T PLN00009 219 ILGTPNEETWPGVTS---------LPDYK----SAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALE 283 (294)
T ss_pred HhCCCChhhcccccc---------chhhh----hhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhc
Confidence 000000000000000 00000 000000000000011223556789999999999999999999986
No 334
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=9.9e-33 Score=290.67 Aligned_cols=283 Identities=22% Similarity=0.319 Sum_probs=197.7
Q ss_pred cccccccccccCcccccceEEEEeC-CCchhhhHHhHhh--hhhHHHHHHHHHHHHhcC-CCCceeEEEEeeccccCCCC
Q 005045 387 STDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQ--QQGALKSFIDECNALKST-RHRNILRVITACSSVDLEGN 462 (717)
Q Consensus 387 ~~~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~~~~~~ 462 (717)
..++|++.+.||+|++|.||+|.+. +++.+|+|.+... .......+.+|+.+++++ +||||+++++++.. .+.
T Consensus 5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~---~~~ 81 (337)
T cd07852 5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKA---END 81 (337)
T ss_pred hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeecc---CCC
Confidence 4578999999999999999999965 6888999987532 223345677899999999 99999999998632 234
Q ss_pred ceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEe
Q 005045 463 DFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVG 542 (717)
Q Consensus 463 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~ 542 (717)
...++||||++ ++|.+++... .+++..+..++.||+.||+|||+. +++||||+|+||+++.++.+||+
T Consensus 82 ~~~~lv~e~~~-~~L~~~~~~~--------~~~~~~~~~i~~qi~~~L~~LH~~---~i~H~dl~p~nill~~~~~~kl~ 149 (337)
T cd07852 82 KDIYLVFEYME-TDLHAVIRAN--------ILEDVHKRYIMYQLLKALKYIHSG---NVIHRDLKPSNILLNSDCRVKLA 149 (337)
T ss_pred ceEEEEecccc-cCHHHHHhcC--------CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEe
Confidence 46899999996 5898888642 467888899999999999999997 99999999999999999999999
Q ss_pred eeccchhcccccCCCCCCcceeecccccccccCCCccCC--CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHH
Q 005045 543 DFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG--QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFV 620 (717)
Q Consensus 543 Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~ 620 (717)
|||.+.......... .........++..|+|||.+.+ .++.++|||||||++|+|++|+.||........ .....
T Consensus 150 d~g~~~~~~~~~~~~--~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~-~~~~~ 226 (337)
T cd07852 150 DFGLARSLSELEENP--ENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQ-LEKII 226 (337)
T ss_pred eccchhccccccccc--cCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHH
Confidence 999998653221110 0112233568889999998643 478999999999999999999999965433211 11100
Q ss_pred Hh--cCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHH
Q 005045 621 SM--ALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVV 698 (717)
Q Consensus 621 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ei 698 (717)
.. ..+......+.. ....++.. ...-...........+++..+.+++.+||+.+|++|||+.++
T Consensus 227 ~~~~~~~~~~~~~~~~----------~~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~i 292 (337)
T cd07852 227 EVIGPPSAEDIESIKS----------PFAATMLD----SLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEA 292 (337)
T ss_pred HHhCCCCHHHHHHHHh----------hhHHHhhh----hcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHH
Confidence 00 000000000000 00000000 000000000011112246778999999999999999999999
Q ss_pred HHH
Q 005045 699 VNN 701 (717)
Q Consensus 699 l~~ 701 (717)
++.
T Consensus 293 l~~ 295 (337)
T cd07852 293 LEH 295 (337)
T ss_pred hhC
Confidence 975
No 335
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=1.5e-32 Score=278.12 Aligned_cols=252 Identities=27% Similarity=0.397 Sum_probs=198.7
Q ss_pred ccccccccCcccccceEEEEeC-CCchhhhHHhHhhh--hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceEE
Q 005045 390 NFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQ--QGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFKA 466 (717)
Q Consensus 390 ~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~ 466 (717)
+|++.+.||+|++|.||.|... +++.|++|++.... ....+.+.+|++++++++|+||+++++.+.... ....+
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~---~~~~~ 77 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEE---KNTLN 77 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCC---CCeEE
Confidence 4788899999999999999966 78999999987554 245678899999999999999999999864321 26889
Q ss_pred EEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeecc
Q 005045 467 LVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGL 546 (717)
Q Consensus 467 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~ 546 (717)
+++||+++++|.+++... ..+++..+..++.|++.|++|||+. +++|+||+|+||+++.++.++|+|||.
T Consensus 78 lv~e~~~~~~L~~~~~~~-------~~~~~~~~~~~~~~l~~~l~~lh~~---~~~h~dl~p~ni~i~~~~~~~l~d~~~ 147 (260)
T cd06606 78 IFLEYVSGGSLSSLLKKF-------GKLPEPVIRKYTRQILEGLAYLHSN---GIVHRDIKGANILVDSDGVVKLADFGC 147 (260)
T ss_pred EEEEecCCCcHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEccccc
Confidence 999999999999998754 4689999999999999999999997 999999999999999999999999999
Q ss_pred chhcccccCCCCCCcceeecccccccccCCCccCCC-CCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHHHhcCC
Q 005045 547 AKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNGQ-VSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVSMALP 625 (717)
Q Consensus 547 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 625 (717)
+......... .......++..|+|||...+. .+.++||||||+++|+|++|..||....... ...
T Consensus 148 ~~~~~~~~~~-----~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~-~~~-------- 213 (260)
T cd06606 148 AKRLGDIETG-----EGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPM-AAL-------- 213 (260)
T ss_pred EEeccccccc-----ccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchH-HHH--------
Confidence 8866222110 112234578899999997654 8999999999999999999999997654111 000
Q ss_pred hhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHH
Q 005045 626 DHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVN 700 (717)
Q Consensus 626 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~ 700 (717)
.......... +.+...+..+.+++.+|++.+|++||++.|+++
T Consensus 214 ---~~~~~~~~~~-----------------------------~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~ 256 (260)
T cd06606 214 ---YKIGSSGEPP-----------------------------EIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQ 256 (260)
T ss_pred ---HhccccCCCc-----------------------------CCCcccCHHHHHHHHHhCcCChhhCCCHHHHhh
Confidence 0000000000 011222567889999999999999999999985
No 336
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=7.6e-33 Score=280.01 Aligned_cols=248 Identities=24% Similarity=0.318 Sum_probs=192.7
Q ss_pred ccccccccCcccccceEEEEeC-CCchhhhHHhHhhh--hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceEE
Q 005045 390 NFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQ--QGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFKA 466 (717)
Q Consensus 390 ~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~ 466 (717)
+|++.+.+|+|++|.||+|..+ +|..+|+|.+.... ....+.+.+|+++++.++|+||+++++.+ ......+
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~-----~~~~~~~ 75 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASF-----QENGRLF 75 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhhee-----ccCCeEE
Confidence 5889999999999999999965 68889999986542 22346778999999999999999999884 4456899
Q ss_pred EEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCC-ceEEeeec
Q 005045 467 LVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDM-TAHVGDFG 545 (717)
Q Consensus 467 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~-~~kl~Dfg 545 (717)
+|+||+++++|.+++..... ..+++..+..++.|++.|++|||+. +++|+||+|+||+++.++ .+||+|||
T Consensus 76 lv~e~~~~~~L~~~~~~~~~-----~~~~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~~~l~d~~ 147 (257)
T cd08225 76 IVMEYCDGGDLMKRINRQRG-----VLFSEDQILSWFVQISLGLKHIHDR---KILHRDIKSQNIFLSKNGMVAKLGDFG 147 (257)
T ss_pred EEEecCCCCcHHHHHHhccC-----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEcCCCCeEEecccc
Confidence 99999999999999875421 3578999999999999999999997 999999999999999876 56999999
Q ss_pred cchhcccccCCCCCCcceeecccccccccCCCccC-CCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHHHhcC
Q 005045 546 LAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMN-GQVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVSMAL 624 (717)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~ 624 (717)
.+....... .......|++.|+|||... +.++.++|+|||||++|+|++|..||....... ...
T Consensus 148 ~~~~~~~~~-------~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~-----~~~--- 212 (257)
T cd08225 148 IARQLNDSM-------ELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQ-----LVL--- 212 (257)
T ss_pred cchhccCCc-------ccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHH-----HHH---
Confidence 887652111 1112245788999999965 458899999999999999999999986432111 110
Q ss_pred ChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHH
Q 005045 625 PDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVN 700 (717)
Q Consensus 625 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~ 700 (717)
.......... .+..+..+.+++.+|++.+|++|||++|+++
T Consensus 213 -----~~~~~~~~~~------------------------------~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~ 253 (257)
T cd08225 213 -----KICQGYFAPI------------------------------SPNFSRDLRSLISQLFKVSPRDRPSITSILK 253 (257)
T ss_pred -----HHhcccCCCC------------------------------CCCCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence 1111110000 0112446788999999999999999999986
No 337
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=9.3e-33 Score=287.69 Aligned_cols=211 Identities=25% Similarity=0.380 Sum_probs=168.3
Q ss_pred ccccccccccccCcccccceEEEEeC-CCchhhhHHhHhhh--hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccC---
Q 005045 386 KSTDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQ--QGALKSFIDECNALKSTRHRNILRVITACSSVDL--- 459 (717)
Q Consensus 386 ~~~~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~--- 459 (717)
...++|++.++||+|++|.||+|... +++.||+|.+.... ......+.+|++++++++||||+++++++.....
T Consensus 9 ~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 88 (310)
T cd07865 9 DEVSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYN 88 (310)
T ss_pred chhhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEeccccccc
Confidence 34568999999999999999999965 78999999876432 2223456689999999999999999998754331
Q ss_pred CCCceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCce
Q 005045 460 EGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTA 539 (717)
Q Consensus 460 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~ 539 (717)
......++||||+. +++.+++.... ..+++.+++.++.||+.|++|||++ +++|+||+|+||+++.++.+
T Consensus 89 ~~~~~~~lv~e~~~-~~l~~~l~~~~------~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~ 158 (310)
T cd07865 89 RYKGSFYLVFEFCE-HDLAGLLSNKN------VKFTLSEIKKVMKMLLNGLYYIHRN---KILHRDMKAANILITKDGIL 158 (310)
T ss_pred CCCceEEEEEcCCC-cCHHHHHHhcc------cCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEECCCCcE
Confidence 12346799999995 58888776432 3689999999999999999999998 99999999999999999999
Q ss_pred EEeeeccchhcccccCCCCCCcceeecccccccccCCCccCCC--CCcccchhhHHHHHHHHHhCCCCCCCC
Q 005045 540 HVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNGQ--VSILGDIYSYGILLLEMFTGKRPTGDM 609 (717)
Q Consensus 540 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~sDvwslG~vl~elltg~~p~~~~ 609 (717)
||+|||.+.......... ........++..|+|||.+.+. ++.++||||||+++|+|++|..||...
T Consensus 159 kl~dfg~~~~~~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~ 227 (310)
T cd07865 159 KLADFGLARAFSLSKNSK---PNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGN 227 (310)
T ss_pred EECcCCCcccccCCcccC---CCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCC
Confidence 999999998653221111 1112234578889999986553 688999999999999999999999754
No 338
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=8.8e-33 Score=283.83 Aligned_cols=198 Identities=30% Similarity=0.453 Sum_probs=164.1
Q ss_pred cccccccCcccccceEEEEeC-CCchhhhHHhHhhh--hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceEEE
Q 005045 391 FSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQ--QGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFKAL 467 (717)
Q Consensus 391 y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~l 467 (717)
|++.++||.|++|.||+|.++ +|+.||+|++.... ......+.+|++++++++|||++++++.+. +.+..++
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~-----~~~~~~i 75 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVH-----SENKLYL 75 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheec-----cCCeEEE
Confidence 678899999999999999965 79999999886543 223456788999999999999999999853 4468999
Q ss_pred EEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeeccc
Q 005045 468 VFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLA 547 (717)
Q Consensus 468 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~ 547 (717)
+|||++ ++|.+++..... ..+++..+..++.|++.||+|||+. +++||||+|+||+++.++.++|+|||.+
T Consensus 76 v~e~~~-~~l~~~~~~~~~-----~~~~~~~~~~~~~~i~~~L~~lH~~---~~~H~dl~p~nil~~~~~~~~l~df~~~ 146 (283)
T cd07835 76 VFEFLD-LDLKKYMDSSPL-----TGLDPPLIKSYLYQLLQGIAYCHSH---RVLHRDLKPQNLLIDREGALKLADFGLA 146 (283)
T ss_pred EEeccC-cCHHHHHhhCCC-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCcEEEeecccc
Confidence 999995 689998875421 3689999999999999999999997 9999999999999999999999999998
Q ss_pred hhcccccCCCCCCcceeecccccccccCCCccCC--CCCcccchhhHHHHHHHHHhCCCCCCCC
Q 005045 548 KFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG--QVSILGDIYSYGILLLEMFTGKRPTGDM 609 (717)
Q Consensus 548 ~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~sDvwslG~vl~elltg~~p~~~~ 609 (717)
...... ........++..|+|||++.+ .++.++|||||||++|+|++|..||...
T Consensus 147 ~~~~~~-------~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~ 203 (283)
T cd07835 147 RAFGVP-------VRTYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGD 203 (283)
T ss_pred cccCCC-------ccccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 754211 111122345788999998654 3688999999999999999999999754
No 339
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=2.3e-32 Score=275.49 Aligned_cols=248 Identities=28% Similarity=0.411 Sum_probs=197.0
Q ss_pred ccccccccCcccccceEEEEeC-CCchhhhHHhHhhhhhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceEEEE
Q 005045 390 NFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFKALV 468 (717)
Q Consensus 390 ~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~lv 468 (717)
+|++.+.||+|++|.||.+..+ +++.+++|.+..........+.+|+++++++.|++++++++.+. .....+++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~~~l~ 75 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYL-----KKDELWIV 75 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEe-----cCCeEEEE
Confidence 4888999999999999999975 78899999987665455678899999999999999999999853 34588999
Q ss_pred EecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeeccch
Q 005045 469 FEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAK 548 (717)
Q Consensus 469 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~ 548 (717)
+||+++++|.+++.... ..+++..+..++.|++.|+++||.. +++||||+|+||+++.++.++|+|||.+.
T Consensus 76 ~e~~~~~~L~~~~~~~~------~~~~~~~~~~i~~~i~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~~~~~ 146 (253)
T cd05122 76 MEFCSGGSLKDLLKSTN------QTLTESQIAYVCKELLKGLEYLHSN---GIIHRDIKAANILLTSDGEVKLIDFGLSA 146 (253)
T ss_pred EecCCCCcHHHHHhhcC------CCCCHHHHHHHHHHHHHHHHHhhcC---CEecCCCCHHHEEEccCCeEEEeeccccc
Confidence 99999999999987542 4689999999999999999999997 99999999999999999999999999987
Q ss_pred hcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHHHhcCChh
Q 005045 549 FLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVSMALPDH 627 (717)
Q Consensus 549 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 627 (717)
....... .....++..|+|||.+.+ .++.++||||||+++|+|++|..||.......... ....
T Consensus 147 ~~~~~~~--------~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~--~~~~----- 211 (253)
T cd05122 147 QLSDTKA--------RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALF--KIAT----- 211 (253)
T ss_pred ccccccc--------ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHH--HHHh-----
Confidence 6521110 223457889999999654 47899999999999999999999986542111100 0000
Q ss_pred hhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHH
Q 005045 628 VMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVN 700 (717)
Q Consensus 628 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~ 700 (717)
..-+... ....++..+.+++.+|++.+|++|||+.|+++
T Consensus 212 ---~~~~~~~-------------------------------~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~ 250 (253)
T cd05122 212 ---NGPPGLR-------------------------------NPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLK 250 (253)
T ss_pred ---cCCCCcC-------------------------------cccccCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 0000000 00112456889999999999999999999985
No 340
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=5.3e-33 Score=292.99 Aligned_cols=206 Identities=24% Similarity=0.330 Sum_probs=165.7
Q ss_pred ccccccccccCcccccceEEEEeC-CCchhhhHHhHhhhhhHHHHHHHHHHHHhcCCCCceeEEEEeecccc--------
Q 005045 388 TDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRVITACSSVD-------- 458 (717)
Q Consensus 388 ~~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~-------- 458 (717)
.++|++.+.||.|++|.||+|..+ +++.||+|.+........+.+.+|+++++.++||||+++++.+....
T Consensus 4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (342)
T cd07854 4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVG 83 (342)
T ss_pred CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccccc
Confidence 579999999999999999999964 78899999887665555677889999999999999999987754322
Q ss_pred -CCCCceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeC-CC
Q 005045 459 -LEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLD-KD 536 (717)
Q Consensus 459 -~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~-~~ 536 (717)
+.+....++||||++ ++|.+++.. ..+++..++.++.||+.|++|||+. +++||||||+||+++ .+
T Consensus 84 ~~~~~~~~~lv~e~~~-~~L~~~~~~--------~~l~~~~~~~~~~qi~~aL~~LH~~---givH~dikp~Nili~~~~ 151 (342)
T cd07854 84 SLTELNSVYIVQEYME-TDLANVLEQ--------GPLSEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANVFINTED 151 (342)
T ss_pred cccccceEEEEeeccc-ccHHHHHHc--------CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCC
Confidence 112246899999996 588888753 3578999999999999999999997 999999999999997 45
Q ss_pred CceEEeeeccchhcccccCCCCCCcceeecccccccccCCCccCC--CCCcccchhhHHHHHHHHHhCCCCCCCC
Q 005045 537 MTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG--QVSILGDIYSYGILLLEMFTGKRPTGDM 609 (717)
Q Consensus 537 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~sDvwslG~vl~elltg~~p~~~~ 609 (717)
+.++++|||.+......... ........++..|+|||.+.+ .++.++|||||||++|+|++|+.||...
T Consensus 152 ~~~kl~dfg~~~~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~ 222 (342)
T cd07854 152 LVLKIGDFGLARIVDPHYSH----KGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGA 222 (342)
T ss_pred ceEEECCcccceecCCcccc----ccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 68899999998765221111 111122346888999998533 4788999999999999999999999654
No 341
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.5e-33 Score=264.09 Aligned_cols=200 Identities=28% Similarity=0.404 Sum_probs=174.6
Q ss_pred ccccccccccCcccccceEEEEeC-CCchhhhHHhHhhh---hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCc
Q 005045 388 TDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQ---QGALKSFIDECNALKSTRHRNILRVITACSSVDLEGND 463 (717)
Q Consensus 388 ~~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~ 463 (717)
-++|..++.+|+|.||.|.+++-+ +|+.+|+|+++... ......-..|-++++..+||.+..+-.. ++..+
T Consensus 167 m~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYs-----FQt~d 241 (516)
T KOG0690|consen 167 MEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYS-----FQTQD 241 (516)
T ss_pred cchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhh-----hccCc
Confidence 457888999999999999999955 89999999998653 3445667789999999999998776655 66778
Q ss_pred eEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEee
Q 005045 464 FKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGD 543 (717)
Q Consensus 464 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~D 543 (717)
.+|+||||..||.|.-.+.+. ..+++..++.+...|+.||.|||++ +||.||+|.+|.|+|.+|++||+|
T Consensus 242 rlCFVMeyanGGeLf~HLsre-------r~FsE~RtRFYGaEIvsAL~YLHs~---~ivYRDlKLENLlLDkDGHIKitD 311 (516)
T KOG0690|consen 242 RLCFVMEYANGGELFFHLSRE-------RVFSEDRTRFYGAEIVSALGYLHSR---NIVYRDLKLENLLLDKDGHIKITD 311 (516)
T ss_pred eEEEEEEEccCceEeeehhhh-------hcccchhhhhhhHHHHHHhhhhhhC---CeeeeechhhhheeccCCceEeee
Confidence 999999999999998888765 6799999999999999999999997 999999999999999999999999
Q ss_pred eccchhcccccCCCCCCcceeecccccccccCCCccCCC-CCcccchhhHHHHHHHHHhCCCCCCCC
Q 005045 544 FGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNGQ-VSILGDIYSYGILLLEMFTGKRPTGDM 609 (717)
Q Consensus 544 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~sDvwslG~vl~elltg~~p~~~~ 609 (717)
||+++.- .........++||+.|.|||++... |+.++|+|++|||+|||+.|+.||..-
T Consensus 312 FGLCKE~-------I~~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~ 371 (516)
T KOG0690|consen 312 FGLCKEE-------IKYGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNK 371 (516)
T ss_pred cccchhc-------ccccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCccccc
Confidence 9999743 2333345678899999999998765 999999999999999999999999754
No 342
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=100.00 E-value=2.1e-36 Score=294.76 Aligned_cols=361 Identities=24% Similarity=0.389 Sum_probs=233.4
Q ss_pred eecEEEcCCCcCcCCCCcCCcCCCCCCEEECCCCcccccCCcCCCCCCCCCEEEccCccccccCCccccCCCCCCEEecc
Q 005045 11 MTQDLNLTYNYLSGKIPTNLSHCTELRSFEASVNDFVGQIPNQLSSLTKLEIIGLGGSNLTGNVPAWIGNFSSLKALSLA 90 (717)
Q Consensus 11 ~~~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~ 90 (717)
.++.|+.++|+++ .+|.+++.+.+|+.|++++|.+. .+|+.++.+..|..|+..+|+++ ..|..+..+.+|..|++.
T Consensus 92 ~l~~l~vs~n~ls-~lp~~i~s~~~l~~l~~s~n~~~-el~~~i~~~~~l~dl~~~~N~i~-slp~~~~~~~~l~~l~~~ 168 (565)
T KOG0472|consen 92 ALKSLNVSHNKLS-ELPEQIGSLISLVKLDCSSNELK-ELPDSIGRLLDLEDLDATNNQIS-SLPEDMVNLSKLSKLDLE 168 (565)
T ss_pred HHHHhhcccchHh-hccHHHhhhhhhhhhhcccccee-ecCchHHHHhhhhhhhccccccc-cCchHHHHHHHHHHhhcc
Confidence 4455555555555 55555555555666666666555 45555555556666666666665 555555566666666666
Q ss_pred CCcCcccCChhhhccCCCCeEeccCCCCCCCCCccccCCCCccEEEcccCcccccCCcccccCCCCcceeeccccccccc
Q 005045 91 WNNLRGSIPNELGQLSGLGFFTLYGNFISGIIPSSIYNISSIYYFSVTQNQLHGQLPTDVGLTLPNLKIFAGAVNYFTGS 170 (717)
Q Consensus 91 ~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~l~~~~~~~l~~L~~L~l~~n~l~~~ 170 (717)
+|+++...|+.+ +++.|++||..+|-++ .+|+.++++.+|..|+|..|+|. .+| -|.+++.|+.|+++.|.|...
T Consensus 169 ~n~l~~l~~~~i-~m~~L~~ld~~~N~L~-tlP~~lg~l~~L~~LyL~~Nki~-~lP--ef~gcs~L~Elh~g~N~i~~l 243 (565)
T KOG0472|consen 169 GNKLKALPENHI-AMKRLKHLDCNSNLLE-TLPPELGGLESLELLYLRRNKIR-FLP--EFPGCSLLKELHVGENQIEML 243 (565)
T ss_pred ccchhhCCHHHH-HHHHHHhcccchhhhh-cCChhhcchhhhHHHHhhhcccc-cCC--CCCccHHHHHHHhcccHHHhh
Confidence 666663333333 3666777777777666 56666777777777777777776 666 344677777777777777744
Q ss_pred CCccCCCCCCCCEEeccCccccccCCCCccCCCCCCeeeccccccCCcccCchhhhhhhccCCCCCEEEeecCcccC---
Q 005045 171 IPVSLSNASNLQVLDFAENGLTGTIPGNFGSLKDLVRLNFDQNELGSREIGDLNFLKFLANCTSLEVLGLARNSFGG--- 247 (717)
Q Consensus 171 ~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~--- 247 (717)
..+...++++|..|||.+|+++ ..|+.++-+.+|.+||+|+|.|++++ ..++++ .|+.|-+.+|.+..
T Consensus 244 pae~~~~L~~l~vLDLRdNklk-e~Pde~clLrsL~rLDlSNN~is~Lp-------~sLgnl-hL~~L~leGNPlrTiRr 314 (565)
T KOG0472|consen 244 PAEHLKHLNSLLVLDLRDNKLK-EVPDEICLLRSLERLDLSNNDISSLP-------YSLGNL-HLKFLALEGNPLRTIRR 314 (565)
T ss_pred HHHHhcccccceeeeccccccc-cCchHHHHhhhhhhhcccCCccccCC-------cccccc-eeeehhhcCCchHHHHH
Confidence 3344558888888888888888 78888888888888888888888875 446666 66666666665520
Q ss_pred -------------------------------------------------------------cCchhhhhccc--cccEEe
Q 005045 248 -------------------------------------------------------------EMPISIANLST--HLRRLT 264 (717)
Q Consensus 248 -------------------------------------------------------------~~p~~~~~~~~--~L~~L~ 264 (717)
.+|...+...+ -.+..+
T Consensus 315 ~ii~~gT~~vLKyLrs~~~~dglS~se~~~e~~~t~~~~~~~~~~~~i~tkiL~~s~~qlt~VPdEVfea~~~~~Vt~Vn 394 (565)
T KOG0472|consen 315 EIISKGTQEVLKYLRSKIKDDGLSQSEGGTETAMTLPSESFPDIYAIITTKILDVSDKQLTLVPDEVFEAAKSEIVTSVN 394 (565)
T ss_pred HHHcccHHHHHHHHHHhhccCCCCCCcccccccCCCCCCcccchhhhhhhhhhcccccccccCCHHHHHHhhhcceEEEe
Confidence 33333333211 155566
Q ss_pred cCCCccCC-----------------------CCCccccCCCCCCEEEccCCcCccccchhhhcCCCCCeEEcccCcCCCC
Q 005045 265 MGENLMHG-----------------------NIPVGIGNLVNLNLLGLEGNNLSGSVPEVIGRLNKLEGLGLNVNKFSGL 321 (717)
Q Consensus 265 l~~N~l~~-----------------------~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 321 (717)
++.|++.. .+|..++.+++|..|+|++|-+. .+|..++.+..|+.|++|+|++. .
T Consensus 395 fskNqL~elPk~L~~lkelvT~l~lsnn~isfv~~~l~~l~kLt~L~L~NN~Ln-~LP~e~~~lv~Lq~LnlS~NrFr-~ 472 (565)
T KOG0472|consen 395 FSKNQLCELPKRLVELKELVTDLVLSNNKISFVPLELSQLQKLTFLDLSNNLLN-DLPEEMGSLVRLQTLNLSFNRFR-M 472 (565)
T ss_pred cccchHhhhhhhhHHHHHHHHHHHhhcCccccchHHHHhhhcceeeecccchhh-hcchhhhhhhhhheecccccccc-c
Confidence 66666641 34444555667777777777776 56666777777777777777766 4
Q ss_pred CCcccccccccceeecccccccccCCcCccCcCCCceEEeecccCCCCCCcccccCCCCcccccccccccc
Q 005045 322 IPSSLGNLTILTRLWMEENRLEGSIPPSLGNCQKLLVLNLSSNDLNGTIPKEVRQSGMSYSDISKSTDNFS 392 (717)
Q Consensus 322 ~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~s~~~~~~~~~~y~ 392 (717)
.|..+..+..|+.+-.++|++....|+++.++.+|..|||.+|++. .+|+.++.. .++..+.-..+.|+
T Consensus 473 lP~~~y~lq~lEtllas~nqi~~vd~~~l~nm~nL~tLDL~nNdlq-~IPp~Lgnm-tnL~hLeL~gNpfr 541 (565)
T KOG0472|consen 473 LPECLYELQTLETLLASNNQIGSVDPSGLKNMRNLTTLDLQNNDLQ-QIPPILGNM-TNLRHLELDGNPFR 541 (565)
T ss_pred chHHHhhHHHHHHHHhccccccccChHHhhhhhhcceeccCCCchh-hCChhhccc-cceeEEEecCCccC
Confidence 4665555556666666667777555666899999999999999998 888887542 23333333344443
No 343
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=9.6e-33 Score=283.57 Aligned_cols=274 Identities=23% Similarity=0.290 Sum_probs=196.6
Q ss_pred cccccccCcccccceEEEEeC-CCchhhhHHhHhhhh--hHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceEEE
Q 005045 391 FSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQQ--GALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFKAL 467 (717)
Q Consensus 391 y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~l 467 (717)
|++.+.||+|++|.||+|..+ +++.+++|.+..... .....+..|++++++++|++|+++++.+ ..++..++
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~~~~~~ 75 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVF-----RHKGDLYL 75 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhh-----ccCCCEEE
Confidence 678899999999999999965 788999998865432 3456788899999999999999999984 34468999
Q ss_pred EEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeeccc
Q 005045 468 VFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLA 547 (717)
Q Consensus 468 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~ 547 (717)
||||++ +++.+++.... ..+++..+..++.|++.|++|||+. +++|+||+|+||+++.++.++|+|||.+
T Consensus 76 v~e~~~-~~l~~~l~~~~------~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~df~~~ 145 (283)
T cd05118 76 VFEFMD-TDLYKLIKDRQ------RGLPESLIKSYLYQLLQGLAFCHSH---GILHRDLKPENLLINTEGVLKLADFGLA 145 (283)
T ss_pred EEeccC-CCHHHHHHhhc------ccCCHHHHHHHHHHHHHHHHHHHHC---CeeecCcCHHHEEECCCCcEEEeeeeee
Confidence 999996 48888876532 4689999999999999999999998 9999999999999999999999999998
Q ss_pred hhcccccCCCCCCcceeecccccccccCCCccCC--CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHHHhcCC
Q 005045 548 KFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG--QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVSMALP 625 (717)
Q Consensus 548 ~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 625 (717)
....... .......++..|+|||.+.+ .++.++|+||+||++|+|++|+.||......+. .......+.
T Consensus 146 ~~~~~~~-------~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~--~~~~~~~~~ 216 (283)
T cd05118 146 RSFGSPV-------RPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQ--LFKIFRTLG 216 (283)
T ss_pred EecCCCc-------ccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHHHcC
Confidence 7652211 11122457788999999654 478999999999999999999999966432211 111111110
Q ss_pred hhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHH
Q 005045 626 DHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVN 700 (717)
Q Consensus 626 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~ 700 (717)
......+... .+..........-..........++++.++.+++.+||+.+|.+||++.|++.
T Consensus 217 ~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~ 279 (283)
T cd05118 217 TPDPEVWPKF------------TSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALA 279 (283)
T ss_pred CCchHhcccc------------hhhhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhh
Confidence 0000000000 00000000000000000111123445778999999999999999999999985
No 344
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=1.2e-32 Score=283.38 Aligned_cols=201 Identities=30% Similarity=0.444 Sum_probs=166.2
Q ss_pred cccccccCcccccceEEEEeC-CCchhhhHHhHhhh--hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceEEE
Q 005045 391 FSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQ--QGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFKAL 467 (717)
Q Consensus 391 y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~l 467 (717)
|++.+.+|+|++|.||+|... +++.+|+|.+.... ......+.+|++++++++|+|++++++.+... ..+..++
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~---~~~~~~l 77 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSK---GKGSIYM 77 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecC---CCCcEEE
Confidence 678899999999999999965 68899999998653 33456788899999999999999999986432 1368999
Q ss_pred EEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeeccc
Q 005045 468 VFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLA 547 (717)
Q Consensus 468 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~ 547 (717)
||||++ +++.+++.... ..+++..++.++.||+.|++|||+. +++|+||+|+||+++.++.++|+|||.+
T Consensus 78 v~e~~~-~~l~~~~~~~~------~~~~~~~~~~i~~~i~~al~~LH~~---~~~h~dl~p~nil~~~~~~~~l~d~g~~ 147 (287)
T cd07840 78 VFEYMD-HDLTGLLDSPE------VKFTESQIKCYMKQLLEGLQYLHSN---GILHRDIKGSNILINNDGVLKLADFGLA 147 (287)
T ss_pred Eecccc-ccHHHHHhccC------CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEEcCCCCEEEccccce
Confidence 999996 58888876542 4689999999999999999999997 9999999999999999999999999998
Q ss_pred hhcccccCCCCCCcceeecccccccccCCCccCC--CCCcccchhhHHHHHHHHHhCCCCCCCCC
Q 005045 548 KFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG--QVSILGDIYSYGILLLEMFTGKRPTGDMF 610 (717)
Q Consensus 548 ~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~sDvwslG~vl~elltg~~p~~~~~ 610 (717)
........ .......++..|+|||.+.+ .++.++||||||+++|+|++|..||....
T Consensus 148 ~~~~~~~~------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~ 206 (287)
T cd07840 148 RPYTKRNS------ADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGST 206 (287)
T ss_pred eeccCCCc------ccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 86532211 11122346778999998654 47899999999999999999999997643
No 345
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=3.2e-32 Score=278.65 Aligned_cols=192 Identities=28% Similarity=0.409 Sum_probs=160.3
Q ss_pred cCcccccceEEEEeC-CCchhhhHHhHhhh---hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceEEEEEecC
Q 005045 397 IGTGSFGSVYKGTLG-DGTIVAIKVLKLQQ---QGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFKALVFEFM 472 (717)
Q Consensus 397 ig~g~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~lv~e~~ 472 (717)
||+|+||.||.|... +|+.||+|.+.... ......+..|++++++++||||+++++.+ ...+..|+||||+
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~~~~~lv~e~~ 75 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAF-----ETKDDLCLVMTLM 75 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEE-----ecCCeEEEEEecC
Confidence 689999999999854 78899999886432 22345667899999999999999999884 4456899999999
Q ss_pred CCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeeccchhccc
Q 005045 473 SNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFE 552 (717)
Q Consensus 473 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 552 (717)
++++|.+++..... ..+++..+..++.|++.|+.|||+. +++||||+|+||+++.++.++|+|||.+.....
T Consensus 76 ~~~~L~~~l~~~~~-----~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~ 147 (277)
T cd05577 76 NGGDLKYHIYNVGE-----PGFPEARAIFYAAQIICGLEHLHQR---RIVYRDLKPENVLLDDHGNVRISDLGLAVELKG 147 (277)
T ss_pred CCCcHHHHHHHcCc-----CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEccCcchhhhcc
Confidence 99999999875421 3689999999999999999999997 999999999999999999999999999876521
Q ss_pred ccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHhCCCCCCCC
Q 005045 553 ISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRPTGDM 609 (717)
Q Consensus 553 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~ 609 (717)
........++..|+|||.+.+ .++.++||||+||++|+|++|+.||...
T Consensus 148 --------~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~ 197 (277)
T cd05577 148 --------GKKIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQR 197 (277)
T ss_pred --------CCccccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCC
Confidence 111123457788999999654 4789999999999999999999999654
No 346
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=1.8e-32 Score=284.45 Aligned_cols=282 Identities=23% Similarity=0.307 Sum_probs=196.8
Q ss_pred ccccccccccccCcccccceEEEEeC-CCchhhhHHhHhhh--hhHHHHHHHHHHHHhcCCCCceeEEEEeecccc----
Q 005045 386 KSTDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQ--QGALKSFIDECNALKSTRHRNILRVITACSSVD---- 458 (717)
Q Consensus 386 ~~~~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~---- 458 (717)
...++|++.+.+|+|++|.||+|..+ +++.||+|.+.... ......+.+|++++++++||||+++++.+.+..
T Consensus 4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~ 83 (302)
T cd07864 4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD 83 (302)
T ss_pred hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence 45678999999999999999999975 68899999986442 223356778999999999999999998864422
Q ss_pred -CCCCceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCC
Q 005045 459 -LEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDM 537 (717)
Q Consensus 459 -~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~ 537 (717)
..+....++||||+++ ++.+.+.... ..+++..+..++.||+.||+|||+. +++||||+|+||+++.++
T Consensus 84 ~~~~~~~~~lv~e~~~~-~l~~~l~~~~------~~~~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~ 153 (302)
T cd07864 84 FKKDKGAFYLVFEYMDH-DLMGLLESGL------VHFSEDHIKSFMKQLLEGLNYCHKK---NFLHRDIKCSNILLNNKG 153 (302)
T ss_pred ccccCCcEEEEEcccCc-cHHHHHhcCC------CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCC
Confidence 1223478999999975 7777665432 4689999999999999999999998 999999999999999999
Q ss_pred ceEEeeeccchhcccccCCCCCCcceeecccccccccCCCccCC--CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchh
Q 005045 538 TAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG--QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFS 615 (717)
Q Consensus 538 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~ 615 (717)
.+||+|||.+........ .......++..|+|||.+.+ .++.++|||||||++|+|++|+.||....... .
T Consensus 154 ~~kl~dfg~~~~~~~~~~------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~-~ 226 (302)
T cd07864 154 QIKLADFGLARLYNSEES------RPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELA-Q 226 (302)
T ss_pred cEEeCcccccccccCCcc------cccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHH-H
Confidence 999999999876522111 11112335778999998654 36899999999999999999999997532211 1
Q ss_pred hhHHH---HhcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCC
Q 005045 616 IHMFV---SMALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRER 692 (717)
Q Consensus 616 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~R 692 (717)
..... ....+.....+............. ... . .........+..+.+++.+||+.+|++|
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-------------~--~~~~~~~~~~~~~~~li~~~l~~~P~~R 290 (302)
T cd07864 227 LELISRLCGSPCPAVWPDVIKLPYFNTMKPKK-QYR-------------R--RLREEFSFIPTPALDLLDHMLTLDPSKR 290 (302)
T ss_pred HHHHHHHhCCCChhhccccccccccccccccc-ccc-------------c--chhhhcCCCCHHHHHHHHHHccCChhhC
Confidence 11111 111111111111100000000000 000 0 0000111225678999999999999999
Q ss_pred CCHHHHHH
Q 005045 693 IAMNVVVN 700 (717)
Q Consensus 693 ps~~eil~ 700 (717)
||+.++++
T Consensus 291 p~~~~il~ 298 (302)
T cd07864 291 CTAEEALN 298 (302)
T ss_pred CCHHHHhc
Confidence 99999975
No 347
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=4.2e-32 Score=277.65 Aligned_cols=241 Identities=20% Similarity=0.288 Sum_probs=181.2
Q ss_pred ccCcccccceEEEEeC-CCchhhhHHhHhhh---hhHHHHHHHH---HHHHhcCCCCceeEEEEeeccccCCCCceEEEE
Q 005045 396 LIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQ---QGALKSFIDE---CNALKSTRHRNILRVITACSSVDLEGNDFKALV 468 (717)
Q Consensus 396 ~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e---~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~lv 468 (717)
.||+|++|.||.|... +++.||+|.+.... ......+..| .+.++...||+|+++.+.+ ...+..++|
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-----~~~~~~~~v 75 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAF-----HTPDKLSFI 75 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeee-----ecCCEEEEE
Confidence 4799999999999964 78899999876432 1111223333 3345556899999998884 445689999
Q ss_pred EecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeeccch
Q 005045 469 FEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAK 548 (717)
Q Consensus 469 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~ 548 (717)
|||++|++|.+++... ..+++..+..++.|++.|++|||+. +++||||+|+||+++.++.++|+|||.+.
T Consensus 76 ~e~~~g~~L~~~l~~~-------~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~nili~~~~~~kl~dfg~~~ 145 (278)
T cd05606 76 LDLMNGGDLHYHLSQH-------GVFSEAEMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLAC 145 (278)
T ss_pred EecCCCCcHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCCCCHHHEEECCCCCEEEccCcCcc
Confidence 9999999999988644 5689999999999999999999997 99999999999999999999999999987
Q ss_pred hcccccCCCCCCcceeecccccccccCCCccCC--CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHHHhcCCh
Q 005045 549 FLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG--QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVSMALPD 626 (717)
Q Consensus 549 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 626 (717)
..... ......|+..|+|||.+.+ .++.++||||+||++|+|++|..||................
T Consensus 146 ~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~---- 212 (278)
T cd05606 146 DFSKK---------KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTL---- 212 (278)
T ss_pred ccCcc---------CCcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHhh----
Confidence 54111 1122458899999999753 47899999999999999999999997642221111000000
Q ss_pred hhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCC-----CHHHHHHH
Q 005045 627 HVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERI-----AMNVVVNN 701 (717)
Q Consensus 627 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp-----s~~eil~~ 701 (717)
.....+ +..++..+.+++.+|++.+|++|| ++.|+++.
T Consensus 213 ----~~~~~~---------------------------------~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~ 255 (278)
T cd05606 213 ----TMAVEL---------------------------------PDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEH 255 (278)
T ss_pred ----ccCCCC---------------------------------CCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhC
Confidence 000111 111255678999999999999999 99999853
No 348
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=99.98 E-value=2e-32 Score=278.14 Aligned_cols=249 Identities=21% Similarity=0.322 Sum_probs=187.4
Q ss_pred ccccccccccccccccc--CcccccceEEEEeC-CCchhhhHHhHhhhhhHHHHHHHHHHHHhcC-CCCceeEEEEeecc
Q 005045 381 YSDISKSTDNFSKENLI--GTGSFGSVYKGTLG-DGTIVAIKVLKLQQQGALKSFIDECNALKST-RHRNILRVITACSS 456 (717)
Q Consensus 381 ~~~~~~~~~~y~~~~~i--g~g~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~ 456 (717)
+++.....++|.+.+.+ |.|+||.||.+..+ +++.+|+|.+........ |+.....+ +||||+++++.+.
T Consensus 6 ~~~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-----e~~~~~~~~~h~~iv~~~~~~~- 79 (267)
T PHA03390 6 LSELVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAI-----EPMVHQLMKDNPNFIKLYYSVT- 79 (267)
T ss_pred HHHHHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcchh-----hHHHHHHhhcCCCEEEEEEEEe-
Confidence 33444456688888887 99999999999954 788899998764422211 22222222 7999999999854
Q ss_pred ccCCCCceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCC
Q 005045 457 VDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKD 536 (717)
Q Consensus 457 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~ 536 (717)
..+..++||||+++++|.+++... ..+++..+..++.||++|++|||+. +++||||+|+||+++.+
T Consensus 80 ----~~~~~~iv~e~~~~~~L~~~l~~~-------~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~ 145 (267)
T PHA03390 80 ----TLKGHVLIMDYIKDGDLFDLLKKE-------GKLSEAEVKKIIRQLVEALNDLHKH---NIIHNDIKLENVLYDRA 145 (267)
T ss_pred ----cCCeeEEEEEcCCCCcHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEeCC
Confidence 345899999999999999999754 4689999999999999999999998 99999999999999998
Q ss_pred C-ceEEeeeccchhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHhCCCCCCCCCCCch
Q 005045 537 M-TAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDF 614 (717)
Q Consensus 537 ~-~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~ 614 (717)
+ .++|+|||.+.... ......++..|+|||++.+ .++.++||||+||++|+|++|..||.....+..
T Consensus 146 ~~~~~l~dfg~~~~~~-----------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~ 214 (267)
T PHA03390 146 KDRIYLCDYGLCKIIG-----------TPSCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEEL 214 (267)
T ss_pred CCeEEEecCccceecC-----------CCccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchh
Confidence 8 99999999887541 1112357889999999755 578999999999999999999999975433322
Q ss_pred hhhHHHHhcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCC
Q 005045 615 SIHMFVSMALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIA 694 (717)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps 694 (717)
....+... ...... .....+..+.+++.+||+.+|.+||+
T Consensus 215 ~~~~~~~~---------~~~~~~-------------------------------~~~~~~~~~~~li~~~l~~~p~~R~~ 254 (267)
T PHA03390 215 DLESLLKR---------QQKKLP-------------------------------FIKNVSKNANDFVQSMLKYNINYRLT 254 (267)
T ss_pred hHHHHHHh---------hcccCC-------------------------------cccccCHHHHHHHHHHhccChhhCCc
Confidence 11111100 000000 11123567889999999999999996
Q ss_pred -HHHHHH
Q 005045 695 -MNVVVN 700 (717)
Q Consensus 695 -~~eil~ 700 (717)
++|+++
T Consensus 255 ~~~~~l~ 261 (267)
T PHA03390 255 NYNEIIK 261 (267)
T ss_pred hHHHHhc
Confidence 688874
No 349
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=99.98 E-value=2.9e-32 Score=280.61 Aligned_cols=247 Identities=23% Similarity=0.333 Sum_probs=191.5
Q ss_pred ccccccccCcccccceEEEEeC-CCchhhhHHhHhhhhhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceEEEE
Q 005045 390 NFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFKALV 468 (717)
Q Consensus 390 ~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~lv 468 (717)
.|....+||+|++|.||.+..+ +++.||+|.+..........+.+|+.+++.++|+|++++++.+ ...+..++|
T Consensus 21 ~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-----~~~~~~~lv 95 (292)
T cd06657 21 YLDNFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY-----LVGDELWVV 95 (292)
T ss_pred HhhhHHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEE-----EeCCEEEEE
Confidence 3444578999999999999864 7899999987654444567788999999999999999999985 345689999
Q ss_pred EecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeeccch
Q 005045 469 FEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAK 548 (717)
Q Consensus 469 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~ 548 (717)
|||+++++|.+++.. ..+++..+..++.|++.|++|||+. |++||||+|+||+++.++.++|+|||.+.
T Consensus 96 ~e~~~~~~L~~~~~~--------~~~~~~~~~~~~~ql~~~l~~lH~~---givH~dl~p~Nilv~~~~~~~l~dfg~~~ 164 (292)
T cd06657 96 MEFLEGGALTDIVTH--------TRMNEEQIAAVCLAVLKALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCA 164 (292)
T ss_pred EecCCCCcHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEcccccce
Confidence 999999999998753 3478899999999999999999998 99999999999999999999999999876
Q ss_pred hcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHHHhcCChh
Q 005045 549 FLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVSMALPDH 627 (717)
Q Consensus 549 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 627 (717)
.... .........++..|+|||...+ .++.++|+||+||++|+|++|..||...... ..........+
T Consensus 165 ~~~~-------~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~--~~~~~~~~~~~-- 233 (292)
T cd06657 165 QVSK-------EVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL--KAMKMIRDNLP-- 233 (292)
T ss_pred eccc-------ccccccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHhhCC--
Confidence 5411 1111123457889999999654 5789999999999999999999998643111 11111111111
Q ss_pred hhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHH
Q 005045 628 VMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVN 700 (717)
Q Consensus 628 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~ 700 (717)
+... .....+..+.+++.+||+.+|.+||++.|+++
T Consensus 234 ------~~~~-------------------------------~~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~ 269 (292)
T cd06657 234 ------PKLK-------------------------------NLHKVSPSLKGFLDRLLVRDPAQRATAAELLK 269 (292)
T ss_pred ------cccC-------------------------------CcccCCHHHHHHHHHHHhCCcccCcCHHHHhc
Confidence 0000 00112445778999999999999999999987
No 350
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=99.98 E-value=1.6e-32 Score=277.38 Aligned_cols=248 Identities=26% Similarity=0.323 Sum_probs=195.1
Q ss_pred ccccccccCcccccceEEEEeC-CCchhhhHHhHhhh--hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceEE
Q 005045 390 NFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQ--QGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFKA 466 (717)
Q Consensus 390 ~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~ 466 (717)
+|++.+++|+|++|.||.+..+ +++.+++|.+.... ......+.+|+++++.++|+||+++.+.+ ......+
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~~~~~ 75 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAF-----LDGNKLC 75 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhh-----ccCCEEE
Confidence 5889999999999999999855 78889999886532 23456778899999999999999998884 3446899
Q ss_pred EEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeecc
Q 005045 467 LVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGL 546 (717)
Q Consensus 467 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~ 546 (717)
+||||+++++|.+++..... ....+++..+..++.|++.|++|||+. +++||||+|+||+++.++.+||+|||.
T Consensus 76 ~v~e~~~~~~L~~~~~~~~~---~~~~~~~~~~~~~~~~l~~al~~lh~~---~i~h~~l~~~ni~~~~~~~~kl~d~g~ 149 (256)
T cd08530 76 IVMEYAPFGDLSKAISKRKK---KRKLIPEQEIWRIFIQLLRGLQALHEQ---KILHRDLKSANILLVANDLVKIGDLGI 149 (256)
T ss_pred EEehhcCCCCHHHHHHHHHh---hcCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEEecCCcEEEeeccc
Confidence 99999999999999865321 124678999999999999999999997 999999999999999999999999999
Q ss_pred chhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHHHhcCC
Q 005045 547 AKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVSMALP 625 (717)
Q Consensus 547 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 625 (717)
+...... ......++..|+|||...+ .++.++|+||+|+++|+|++|..||....... ......
T Consensus 150 ~~~~~~~---------~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~--~~~~~~---- 214 (256)
T cd08530 150 SKVLKKN---------MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQD--LRYKVQ---- 214 (256)
T ss_pred hhhhccC---------CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHh----
Confidence 8765221 1122447889999999655 47889999999999999999999996542211 111100
Q ss_pred hhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHH
Q 005045 626 DHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVN 700 (717)
Q Consensus 626 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~ 700 (717)
....+. .+..++..+.+++.+|++.+|++|||+.|+++
T Consensus 215 -------~~~~~~------------------------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 252 (256)
T cd08530 215 -------RGKYPP------------------------------IPPIYSQDLQNFIRSMLQVKPKLRPNCDKILA 252 (256)
T ss_pred -------cCCCCC------------------------------CchhhCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 000000 11123566889999999999999999999986
No 351
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=99.98 E-value=1.1e-32 Score=289.57 Aligned_cols=289 Identities=20% Similarity=0.228 Sum_probs=203.6
Q ss_pred ccccccccCcccccceEEEEeC-CCchhhhHHhHhhh--hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceEE
Q 005045 390 NFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQ--QGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFKA 466 (717)
Q Consensus 390 ~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~ 466 (717)
+|++.+.||.|++|.||+|+.. +++.||+|.+.... ....+.+.+|+.+++.++|+||+++.+++...........|
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 5899999999999999999965 68999999887543 34457788999999999999999999986543322334789
Q ss_pred EEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeecc
Q 005045 467 LVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGL 546 (717)
Q Consensus 467 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~ 546 (717)
++|||++ ++|.+++... ..+++..++.++.||+.||+|||+. |++||||||+||+++.++.++|+|||.
T Consensus 81 lv~e~~~-~~l~~~l~~~-------~~l~~~~~~~i~~~l~~~l~~LH~~---gi~H~dlkp~nili~~~~~~~L~dfg~ 149 (330)
T cd07834 81 IVTELME-TDLHKVIKSP-------QPLTDDHIQYFLYQILRGLKYLHSA---NVIHRDLKPSNILVNSNCDLKICDFGL 149 (330)
T ss_pred EEecchh-hhHHHHHhCC-------CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccCc
Confidence 9999996 5898888754 4689999999999999999999998 999999999999999999999999999
Q ss_pred chhcccccCCCCCCcceeecccccccccCCCccCC--CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHHHhcC
Q 005045 547 AKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG--QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVSMAL 624 (717)
Q Consensus 547 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~ 624 (717)
+......... ........++..|+|||.+.+ .++.++|+||+||++|+|++|..||......+. . .......
T Consensus 150 ~~~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~-~-~~i~~~~ 223 (330)
T cd07834 150 ARGVDPDEDE----KGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQ-L-NLIVEVL 223 (330)
T ss_pred eEeecccccc----cccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHH-H-HHHHHhc
Confidence 9875322110 011223457888999999654 478999999999999999999999976543211 1 1111101
Q ss_pred ChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHHH--H
Q 005045 625 PDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVNN--L 702 (717)
Q Consensus 625 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~~--l 702 (717)
.....+.+.. .....+.+........ ....-....++.+..+.+++.+||+++|++|||+.++++. +
T Consensus 224 ~~~~~~~~~~-------~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~ 292 (330)
T cd07834 224 GTPSEEDLKF-------ITSEKARNYLKSLPKK----PKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYL 292 (330)
T ss_pred CCCChhHhhh-------ccccchhhHHhhcccC----CcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccH
Confidence 0000000000 0000011111100000 0000000112236678999999999999999999999974 5
Q ss_pred HHHH
Q 005045 703 KTIR 706 (717)
Q Consensus 703 ~~i~ 706 (717)
+.++
T Consensus 293 ~~~~ 296 (330)
T cd07834 293 AQLH 296 (330)
T ss_pred Hhhc
Confidence 5444
No 352
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=99.98 E-value=4.3e-32 Score=273.92 Aligned_cols=246 Identities=28% Similarity=0.420 Sum_probs=195.3
Q ss_pred ccccccccCcccccceEEEEeC-CCchhhhHHhHhhhh--hHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceEE
Q 005045 390 NFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQQ--GALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFKA 466 (717)
Q Consensus 390 ~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~ 466 (717)
+|++.+.||+|++|.||.|... +++.|++|.+..... .....+.+|++++++++|+|++++++.+. .....+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~~~ 75 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIE-----TSDSLY 75 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEE-----eCCEEE
Confidence 5889999999999999999865 688899999876543 45578899999999999999999999853 345899
Q ss_pred EEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeecc
Q 005045 467 LVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGL 546 (717)
Q Consensus 467 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~ 546 (717)
++|||+++++|.+++... ..+++..+..++.|++.|+.|||+. |++||||+|+||+++.++.++|+|||.
T Consensus 76 ~v~e~~~~~~L~~~~~~~-------~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~ 145 (254)
T cd06627 76 IILEYAENGSLRQIIKKF-------GPFPESLVAVYVYQVLQGLAYLHEQ---GVIHRDIKAANILTTKDGVVKLADFGV 145 (254)
T ss_pred EEEecCCCCcHHHHHHhc-------cCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEECCCCCEEEecccc
Confidence 999999999999998754 5689999999999999999999997 999999999999999999999999999
Q ss_pred chhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHHHhcCC
Q 005045 547 AKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVSMALP 625 (717)
Q Consensus 547 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 625 (717)
+........ ......++..|+|||...+ .++.++||||+|+++|+|++|..||....... ......
T Consensus 146 ~~~~~~~~~-------~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~--~~~~~~---- 212 (254)
T cd06627 146 ATKLNDVSK-------DDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMA--ALFRIV---- 212 (254)
T ss_pred ceecCCCcc-------cccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHH--HHHHHh----
Confidence 986622111 1223457889999999654 37899999999999999999999986542111 000000
Q ss_pred hhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHH
Q 005045 626 DHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVN 700 (717)
Q Consensus 626 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~ 700 (717)
...... .+...+..+.+++.+||+.+|++|||+.|++.
T Consensus 213 -------~~~~~~------------------------------~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 250 (254)
T cd06627 213 -------QDDHPP------------------------------LPEGISPELKDFLMQCFQKDPNLRPTAKQLLK 250 (254)
T ss_pred -------ccCCCC------------------------------CCCCCCHHHHHHHHHHHhCChhhCcCHHHHhc
Confidence 000000 01112456788999999999999999999874
No 353
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=99.98 E-value=4.8e-32 Score=274.98 Aligned_cols=241 Identities=25% Similarity=0.339 Sum_probs=188.6
Q ss_pred cCcccccceEEEEeC-CCchhhhHHhHhhh---hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceEEEEEecC
Q 005045 397 IGTGSFGSVYKGTLG-DGTIVAIKVLKLQQ---QGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFKALVFEFM 472 (717)
Q Consensus 397 ig~g~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~lv~e~~ 472 (717)
||.|++|.||.|... +++.||+|++.... ....+.+.+|+++++.++||||+++++.+ .++...+++|||+
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~lv~e~~ 75 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTF-----KDKKYIYMLMEYC 75 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeE-----EcCCccEEEEecC
Confidence 689999999999965 68899999886432 23457789999999999999999999984 4456899999999
Q ss_pred CCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeeccchhccc
Q 005045 473 SNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFE 552 (717)
Q Consensus 473 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 552 (717)
++++|.+++.+. ..+++..+..++.||+.|++|+|+. +++|+||+|+||+++.++.++|+|||.+.....
T Consensus 76 ~~~~L~~~l~~~-------~~l~~~~~~~~~~~i~~~l~~lH~~---~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~ 145 (262)
T cd05572 76 LGGELWTILRDR-------GLFDEYTARFYIACVVLAFEYLHNR---GIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKS 145 (262)
T ss_pred CCCcHHHHHhhc-------CCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEEcCCCCEEEeeCCcccccCc
Confidence 999999999754 4588999999999999999999997 999999999999999999999999999886522
Q ss_pred ccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHHHhcCChhhhhh
Q 005045 553 ISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVSMALPDHVMDI 631 (717)
Q Consensus 553 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 631 (717)
.. ......++..|+|||.+.+ .++.++|+||+|+++|+|++|..||.....+..... ..+
T Consensus 146 ~~--------~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~-----------~~~ 206 (262)
T cd05572 146 GQ--------KTWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIY-----------NDI 206 (262)
T ss_pred cc--------ccccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHH-----------HHH
Confidence 11 1122457888999999654 588999999999999999999999976532111111 111
Q ss_pred cCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCC-----HHHHHH
Q 005045 632 LDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIA-----MNVVVN 700 (717)
Q Consensus 632 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps-----~~eil~ 700 (717)
.+...... .+...+..+.+++.+||+.+|++||+ ++|+++
T Consensus 207 ~~~~~~~~-----------------------------~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~ 251 (262)
T cd05572 207 LKGNGKLE-----------------------------FPNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKK 251 (262)
T ss_pred hccCCCCC-----------------------------CCcccCHHHHHHHHHHccCChhhCcCCcccCHHHHhc
Confidence 10000000 01112456789999999999999999 777765
No 354
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=99.98 E-value=7.6e-32 Score=277.49 Aligned_cols=275 Identities=24% Similarity=0.338 Sum_probs=192.2
Q ss_pred cccccccCcccccceEEEEeC-CCchhhhHHhHhhh--hhHHHHHHHHHHHHhcC---CCCceeEEEEeeccccCCCCce
Q 005045 391 FSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQ--QGALKSFIDECNALKST---RHRNILRVITACSSVDLEGNDF 464 (717)
Q Consensus 391 y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l---~h~ni~~~~~~~~~~~~~~~~~ 464 (717)
|++.+.||+|++|.||+|+++ +++.||+|.+.... ......+.+|+.+++++ .|+|++++++.+..........
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 678899999999999999976 58999999987432 22234556677776655 6999999999976554333345
Q ss_pred EEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeee
Q 005045 465 KALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDF 544 (717)
Q Consensus 465 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Df 544 (717)
.+++|||++ +++.+++..... ..+++..++.++.|++.||+|||+. +++|+||+|+||+++.++.++|+||
T Consensus 81 ~~l~~e~~~-~~l~~~l~~~~~-----~~l~~~~~~~~~~~i~~al~~LH~~---~i~h~~l~~~nili~~~~~~~l~df 151 (287)
T cd07838 81 LTLVFEHVD-QDLATYLSKCPK-----PGLPPETIKDLMRQLLRGVDFLHSH---RIVHRDLKPQNILVTSDGQVKIADF 151 (287)
T ss_pred eEEEehhcc-cCHHHHHHHccC-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhEEEccCCCEEEecc
Confidence 899999996 589888865421 3589999999999999999999998 9999999999999999999999999
Q ss_pred ccchhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHHHh-
Q 005045 545 GLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVSM- 622 (717)
Q Consensus 545 g~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~- 622 (717)
|.+...... .......++..|+|||++.+ .++.++|||||||++|+|++|..||......+ ........
T Consensus 152 g~~~~~~~~--------~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~-~~~~~~~~~ 222 (287)
T cd07838 152 GLARIYSFE--------MALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEAD-QLDKIFDVI 222 (287)
T ss_pred CcceeccCC--------cccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHH-HHHHHHHHc
Confidence 998765211 11112346788999999654 57899999999999999999999987543221 11111111
Q ss_pred cCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHH
Q 005045 623 ALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVN 700 (717)
Q Consensus 623 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~ 700 (717)
..+.................. .....-.....+.+..+.+++.+||+.+|++||++.|+++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~ 283 (287)
T cd07838 223 GLPSEEEWPRNVSLPRSSFPS-----------------YTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQ 283 (287)
T ss_pred CCCChHhcCCCcccchhhccc-----------------ccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence 000000000000000000000 0000000111233567789999999999999999999975
No 355
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=99.98 E-value=8.2e-32 Score=281.02 Aligned_cols=246 Identities=24% Similarity=0.316 Sum_probs=190.8
Q ss_pred cccccccccCcccccceEEEEeC-CCchhhhHHhHhh---hhhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCce
Q 005045 389 DNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQ---QQGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDF 464 (717)
Q Consensus 389 ~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 464 (717)
..|...+.+|+|+||.||+|++. +++.+|+|.+... .......+..|++++++++|||++++++++. .+..
T Consensus 25 ~~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-----~~~~ 99 (317)
T cd06635 25 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYL-----REHT 99 (317)
T ss_pred hhhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEe-----eCCe
Confidence 45889999999999999999954 7889999987633 2233467888999999999999999999854 3457
Q ss_pred EEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeee
Q 005045 465 KALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDF 544 (717)
Q Consensus 465 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Df 544 (717)
.++||||++ +++.+.+.... ..+++..+..++.|++.|+.|||+. +++||||+|+||+++.++.++|+||
T Consensus 100 ~~lv~e~~~-g~l~~~~~~~~------~~l~~~~~~~i~~~i~~~l~~lH~~---~i~H~dL~p~Nil~~~~~~~kl~df 169 (317)
T cd06635 100 AWLVMEYCL-GSASDLLEVHK------KPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADF 169 (317)
T ss_pred EEEEEeCCC-CCHHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcccEEECCCCCEEEecC
Confidence 899999996 57777765432 4589999999999999999999998 9999999999999999999999999
Q ss_pred ccchhcccccCCCCCCcceeecccccccccCCCccC----CCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHH
Q 005045 545 GLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMN----GQVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFV 620 (717)
Q Consensus 545 g~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~----~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~ 620 (717)
|.+..... .....++..|+|||.+. +.++.++|||||||++|+|++|..||........ .....
T Consensus 170 g~~~~~~~-----------~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~-~~~~~ 237 (317)
T cd06635 170 GSASIASP-----------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA-LYHIA 237 (317)
T ss_pred CCccccCC-----------cccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHH-HHHHH
Confidence 98764311 11235788899999952 3578999999999999999999999865321110 00000
Q ss_pred HhcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHH
Q 005045 621 SMALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVN 700 (717)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~ 700 (717)
....... ....++..+.+++.+|++.+|.+||++.||++
T Consensus 238 ------------~~~~~~~-----------------------------~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 276 (317)
T cd06635 238 ------------QNESPTL-----------------------------QSNEWSDYFRNFVDSCLQKIPQDRPTSEELLK 276 (317)
T ss_pred ------------hccCCCC-----------------------------CCccccHHHHHHHHHHccCCcccCcCHHHHHh
Confidence 0000000 01123556789999999999999999999998
Q ss_pred HH
Q 005045 701 NL 702 (717)
Q Consensus 701 ~l 702 (717)
..
T Consensus 277 ~~ 278 (317)
T cd06635 277 HM 278 (317)
T ss_pred Ch
Confidence 54
No 356
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.98 E-value=5.4e-33 Score=273.47 Aligned_cols=217 Identities=29% Similarity=0.450 Sum_probs=182.9
Q ss_pred cccccccccccccccccCcccccceEEEEe-CCCchhhhHHhHhhh-------hhHHHHHHHHHHHHhcCCCCceeEEEE
Q 005045 381 YSDISKSTDNFSKENLIGTGSFGSVYKGTL-GDGTIVAIKVLKLQQ-------QGALKSFIDECNALKSTRHRNILRVIT 452 (717)
Q Consensus 381 ~~~~~~~~~~y~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~-------~~~~~~~~~e~~~l~~l~h~ni~~~~~ 452 (717)
+.|-.-..++|-.++.+|+|||+.||+|.+ ...+.||+|+..... ....+...+|.+|.+.++||.||++|+
T Consensus 455 FkDHptLn~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYD 534 (775)
T KOG1151|consen 455 FKDHPTLNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYD 534 (775)
T ss_pred hccCcchHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeee
Confidence 455666788999999999999999999994 478889999876431 123466778999999999999999999
Q ss_pred eeccccCCCCceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEE
Q 005045 453 ACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVL 532 (717)
Q Consensus 453 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIl 532 (717)
++. -+.+..|-|+|||+|-+|+-|++.+ +.+++.+++.|+-||+.||.||.+. ..+|+|-||||.||+
T Consensus 535 yfs----lDtdsFCTVLEYceGNDLDFYLKQh-------klmSEKEARSIiMQiVnAL~YLNEi-kpPIIHYDLKPgNIL 602 (775)
T KOG1151|consen 535 YFS----LDTDSFCTVLEYCEGNDLDFYLKQH-------KLMSEKEARSIIMQIVNALKYLNEI-KPPIIHYDLKPGNIL 602 (775)
T ss_pred eee----eccccceeeeeecCCCchhHHHHhh-------hhhhHHHHHHHHHHHHHHHHHHhcc-CCCeeeeccCCccEE
Confidence 963 3456789999999999999999866 6799999999999999999999985 468999999999999
Q ss_pred eC---CCCceEEeeeccchhcccccCCCCCCcceeecccccccccCCCcc-CC----CCCcccchhhHHHHHHHHHhCCC
Q 005045 533 LD---KDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHM-NG----QVSILGDIYSYGILLLEMFTGKR 604 (717)
Q Consensus 533 l~---~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~-~~----~~~~~sDvwslG~vl~elltg~~ 604 (717)
+. ..|.+||+|||++.++....+............+||..|.+||.+ -| +++.++||||+||++|.++.|+.
T Consensus 603 Lv~GtacGeIKITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrK 682 (775)
T KOG1151|consen 603 LVNGTACGEIKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRK 682 (775)
T ss_pred EecCcccceeEeeecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCC
Confidence 95 457999999999999966555545555556678899999999994 44 36899999999999999999999
Q ss_pred CCCCC
Q 005045 605 PTGDM 609 (717)
Q Consensus 605 p~~~~ 609 (717)
||...
T Consensus 683 PFGhn 687 (775)
T KOG1151|consen 683 PFGHN 687 (775)
T ss_pred CCCCc
Confidence 99654
No 357
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=99.98 E-value=2.4e-32 Score=284.68 Aligned_cols=213 Identities=26% Similarity=0.375 Sum_probs=167.2
Q ss_pred ccccccccccCcccccceEEEEeC-CCchhhhHHhHhhh--hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccC---CC
Q 005045 388 TDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQ--QGALKSFIDECNALKSTRHRNILRVITACSSVDL---EG 461 (717)
Q Consensus 388 ~~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~---~~ 461 (717)
.++|++.++||.|++|.||+|.++ +++.+|+|.+.... ......+.+|++++++++||||+++++.+..... ..
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 679999999999999999999965 78899999875432 1223456789999999999999999887543321 23
Q ss_pred CceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEE
Q 005045 462 NDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHV 541 (717)
Q Consensus 462 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl 541 (717)
....++||||+. +++.+.+.... ..+++..+..++.|+++||+|||+. +++||||+|+||+++.++.++|
T Consensus 87 ~~~~~lv~~~~~-~~l~~~~~~~~------~~~~~~~~~~i~~~l~~al~~lH~~---~i~H~dl~p~nil~~~~~~~~l 156 (311)
T cd07866 87 RGSVYMVTPYMD-HDLSGLLENPS------VKLTESQIKCYMLQLLEGINYLHEN---HILHRDIKAANILIDNQGILKI 156 (311)
T ss_pred CceEEEEEecCC-cCHHHHHhccc------cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEE
Confidence 346899999985 56777665432 4689999999999999999999998 9999999999999999999999
Q ss_pred eeeccchhcccccCCCCC----CcceeecccccccccCCCccCC--CCCcccchhhHHHHHHHHHhCCCCCCCCC
Q 005045 542 GDFGLAKFLFEISDNPSK----NQTVSIGLKGSIGYIPPEHMNG--QVSILGDIYSYGILLLEMFTGKRPTGDMF 610 (717)
Q Consensus 542 ~Dfg~~~~~~~~~~~~~~----~~~~~~~~~~~~~y~aPE~~~~--~~~~~sDvwslG~vl~elltg~~p~~~~~ 610 (717)
+|||.+............ .........++..|+|||.+.+ .++.++|||||||++|+|++|..||....
T Consensus 157 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~ 231 (311)
T cd07866 157 ADFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKS 231 (311)
T ss_pred CcCccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCC
Confidence 999999765322111110 1111123456788999998644 37899999999999999999999997543
No 358
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=99.98 E-value=7e-32 Score=272.97 Aligned_cols=250 Identities=25% Similarity=0.387 Sum_probs=197.1
Q ss_pred ccccccccCcccccceEEEEeC-CCchhhhHHhHhhh--hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceEE
Q 005045 390 NFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQ--QGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFKA 466 (717)
Q Consensus 390 ~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~ 466 (717)
+|.+.+.||.|++|.||.+.+. +++.|++|.+.... ......+.+|+++++.++|+|++++.+.+. .....+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~-----~~~~~~ 75 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFE-----EKGKLC 75 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEe-----cCCEEE
Confidence 5889999999999999999965 78899999987553 245677889999999999999999999853 346899
Q ss_pred EEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeecc
Q 005045 467 LVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGL 546 (717)
Q Consensus 467 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~ 546 (717)
+|+||+++++|.+++..... ....+++..+..++.+++.|++|||+. +++|+||+|+||+++.++.++|+|||.
T Consensus 76 lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~i~~~i~~~l~~lh~~---~~~H~dl~~~nil~~~~~~~~l~d~~~ 149 (258)
T cd08215 76 IVMEYADGGDLSQKIKKQKK---EGKPFPEEQILDWFVQLCLALKYLHSR---KILHRDIKPQNIFLTSNGLVKLGDFGI 149 (258)
T ss_pred EEEEecCCCcHHHHHHHhhc---cCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHHeEEcCCCcEEECCccc
Confidence 99999999999999875421 115689999999999999999999998 999999999999999999999999999
Q ss_pred chhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHHHhcCC
Q 005045 547 AKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVSMALP 625 (717)
Q Consensus 547 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 625 (717)
+....... .......+++.|+|||...+ .++.++|+||+|+++|+|++|..||....... ...
T Consensus 150 ~~~~~~~~-------~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~--~~~------- 213 (258)
T cd08215 150 SKVLSSTV-------DLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLE--LAL------- 213 (258)
T ss_pred eeecccCc-------ceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHH--HHH-------
Confidence 87652111 12233457889999999654 47899999999999999999999986542111 000
Q ss_pred hhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHH
Q 005045 626 DHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVN 700 (717)
Q Consensus 626 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~ 700 (717)
......... .+..++..+.+++.+||+.+|++|||+.|+++
T Consensus 214 ----~~~~~~~~~------------------------------~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~ 254 (258)
T cd08215 214 ----KILKGQYPP------------------------------IPSQYSSELRNLVSSLLQKDPEERPSIAQILQ 254 (258)
T ss_pred ----HHhcCCCCC------------------------------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 001100000 00122556788999999999999999999986
No 359
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=99.98 E-value=9.8e-32 Score=281.31 Aligned_cols=278 Identities=23% Similarity=0.264 Sum_probs=197.1
Q ss_pred cccccccccccccccCcccccceEEEEeC-CCchhhhHHhHhh--hhhHHHHHHHHHHHHhcCCCCceeEEEEeeccccC
Q 005045 383 DISKSTDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQ--QQGALKSFIDECNALKSTRHRNILRVITACSSVDL 459 (717)
Q Consensus 383 ~~~~~~~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~ 459 (717)
++...+++|++.+.||.|++|.||+|..+ +++.||+|.+... .....+.+..|++++++++||||+++.+++.
T Consensus 4 ~~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~---- 79 (328)
T cd07856 4 TVFEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFI---- 79 (328)
T ss_pred ceeccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEe----
Confidence 44567889999999999999999999955 8899999987532 2223466778999999999999999999863
Q ss_pred CCCceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCce
Q 005045 460 EGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTA 539 (717)
Q Consensus 460 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~ 539 (717)
......+++|||+ +++|.+++.. ..+++..+..++.|++.||+|||+. +++||||+|+||+++.++.+
T Consensus 80 ~~~~~~~lv~e~~-~~~L~~~~~~--------~~~~~~~~~~~~~ql~~aL~~LH~~---~iiH~dl~p~Nili~~~~~~ 147 (328)
T cd07856 80 SPLEDIYFVTELL-GTDLHRLLTS--------RPLEKQFIQYFLYQILRGLKYVHSA---GVVHRDLKPSNILINENCDL 147 (328)
T ss_pred cCCCcEEEEeehh-ccCHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEeECCCCCE
Confidence 2345789999998 5789888763 3468888899999999999999998 99999999999999999999
Q ss_pred EEeeeccchhcccccCCCCCCcceeecccccccccCCCccCC--CCCcccchhhHHHHHHHHHhCCCCCCCCCCCch-hh
Q 005045 540 HVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG--QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDF-SI 616 (717)
Q Consensus 540 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~-~~ 616 (717)
+|+|||.+..... ......++..|+|||.+.+ .++.++|||||||++|+|++|..||........ ..
T Consensus 148 ~l~dfg~~~~~~~----------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~ 217 (328)
T cd07856 148 KICDFGLARIQDP----------QMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSI 217 (328)
T ss_pred EeCccccccccCC----------CcCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 9999999875311 1112346788999998654 478999999999999999999999965432110 00
Q ss_pred hHHHHhcCChhh-hhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCH
Q 005045 617 HMFVSMALPDHV-MDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAM 695 (717)
Q Consensus 617 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~ 695 (717)
........++.+ ....+... .++...... ............++..+.+++.+|++.+|++|||+
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~----~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~ 282 (328)
T cd07856 218 ITDLLGTPPDDVINTICSENT-----------LRFVQSLPK----REPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISA 282 (328)
T ss_pred HHHHhCCCCHHHHHhccchhh-----------HHHHhhccc----cCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCH
Confidence 000001111111 11110000 000000000 00000000111235678899999999999999999
Q ss_pred HHHHHH
Q 005045 696 NVVVNN 701 (717)
Q Consensus 696 ~eil~~ 701 (717)
.|++..
T Consensus 283 ~ell~~ 288 (328)
T cd07856 283 AEALAH 288 (328)
T ss_pred HHHhcC
Confidence 999864
No 360
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=99.98 E-value=7.3e-33 Score=257.00 Aligned_cols=252 Identities=22% Similarity=0.329 Sum_probs=192.7
Q ss_pred ccccccccccCcccccceEEEEeC-CCchhhhHHhHhhh-hhHHHHHHHHHHHHhcC-CCCceeEEEEeeccccCCCCce
Q 005045 388 TDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQ-QGALKSFIDECNALKST-RHRNILRVITACSSVDLEGNDF 464 (717)
Q Consensus 388 ~~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~~~~~~~~ 464 (717)
.++...+..+|.|.-|.||+++.+ +|...|||.+.... .+..+++...++++... ++|.||+.++++. .+..
T Consensus 91 indl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi-----~n~d 165 (391)
T KOG0983|consen 91 INDLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFI-----TNTD 165 (391)
T ss_pred hHHhhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEe-----eCch
Confidence 345667888999999999999965 78999999997553 45567888888876655 5999999999953 3446
Q ss_pred EEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeee
Q 005045 465 KALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDF 544 (717)
Q Consensus 465 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Df 544 (717)
.++.||.|. ..+...+++-. +.+++..+-++...+++||.||.+.| +|+|||+||+||++|+.|++|++||
T Consensus 166 V~IcMelMs-~C~ekLlkrik------~piPE~ilGk~tva~v~AL~YLKeKH--~viHRDvKPSNILlDe~GniKlCDF 236 (391)
T KOG0983|consen 166 VFICMELMS-TCAEKLLKRIK------GPIPERILGKMTVAIVKALYYLKEKH--GVIHRDVKPSNILLDERGNIKLCDF 236 (391)
T ss_pred HHHHHHHHH-HHHHHHHHHhc------CCchHHhhhhhHHHHHHHHHHHHHhc--ceeecccCccceEEccCCCEEeecc
Confidence 789999983 34444444322 56899999999999999999999986 9999999999999999999999999
Q ss_pred ccchhcccccCCCCCCcceeecccccccccCCCccCC----CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHH
Q 005045 545 GLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG----QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFV 620 (717)
Q Consensus 545 g~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~----~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~ 620 (717)
|.+-++.+.. .....+|.+.|||||-+.- +|+-++||||||++++||.||+.||.....+-..+....
T Consensus 237 GIsGrlvdSk--------AhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvl 308 (391)
T KOG0983|consen 237 GISGRLVDSK--------AHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVL 308 (391)
T ss_pred cccceeeccc--------ccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHH
Confidence 9998873222 2233568899999999643 488999999999999999999999987533322221111
Q ss_pred HhcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHH
Q 005045 621 SMALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVN 700 (717)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~ 700 (717)
. ..| |.++. ...++..+.+|+..||+.|+.+||...++++
T Consensus 309 n-~eP--------P~L~~-------------------------------~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~ 348 (391)
T KOG0983|consen 309 N-EEP--------PLLPG-------------------------------HMGFSPDFQSFVKDCLTKDHRKRPKYNKLLE 348 (391)
T ss_pred h-cCC--------CCCCc-------------------------------ccCcCHHHHHHHHHHhhcCcccCcchHHHhc
Confidence 1 111 11111 0113667889999999999999999999986
Q ss_pred H
Q 005045 701 N 701 (717)
Q Consensus 701 ~ 701 (717)
.
T Consensus 349 h 349 (391)
T KOG0983|consen 349 H 349 (391)
T ss_pred C
Confidence 3
No 361
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=4.8e-32 Score=268.42 Aligned_cols=273 Identities=25% Similarity=0.387 Sum_probs=206.3
Q ss_pred cccccccccccCcccccceEEEEeCCCchhhhHHhHhhhhhHHHHHHHHHHHHhcC--CCCceeEEEEeeccccCCCCce
Q 005045 387 STDNFSKENLIGTGSFGSVYKGTLGDGTIVAIKVLKLQQQGALKSFIDECNALKST--RHRNILRVITACSSVDLEGNDF 464 (717)
Q Consensus 387 ~~~~y~~~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l--~h~ni~~~~~~~~~~~~~~~~~ 464 (717)
.+++.+..+.||+|.||.||+|.|. |+.||||++...++ +...+|.+|.+.. +|+||+.+++.-.-. -..-.+
T Consensus 209 iarqI~L~e~IGkGRyGEVwrG~wr-Ge~VAVKiF~srdE---~SWfrEtEIYqTvmLRHENILgFIaaD~~~-~gs~TQ 283 (513)
T KOG2052|consen 209 IARQIVLQEIIGKGRFGEVWRGRWR-GEDVAVKIFSSRDE---RSWFRETEIYQTVMLRHENILGFIAADNKD-NGSWTQ 283 (513)
T ss_pred hhheeEEEEEecCccccceeecccc-CCceEEEEecccch---hhhhhHHHHHHHHHhccchhhhhhhccccC-CCceEE
Confidence 3567788999999999999999995 89999999986543 4566788888774 999999999873221 123347
Q ss_pred EEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcC-----CCCeeecCCCCCCEEeCCCCce
Q 005045 465 KALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHC-----DTPIAHCDLKPSNVLLDKDMTA 539 (717)
Q Consensus 465 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~-----~~~ivH~dlkp~NIll~~~~~~ 539 (717)
+|+|++|.+.|+|+||+.+. .++...+++++..+|.||++||..+ ...|.|||||+.||+|..+|.+
T Consensus 284 LwLvTdYHe~GSL~DyL~r~--------tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C 355 (513)
T KOG2052|consen 284 LWLVTDYHEHGSLYDYLNRN--------TVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTC 355 (513)
T ss_pred EEEeeecccCCcHHHHHhhc--------cCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcE
Confidence 89999999999999999764 5899999999999999999999654 3469999999999999999999
Q ss_pred EEeeeccchhcccccCCCCCCcceeecccccccccCCCccCCCC-------CcccchhhHHHHHHHHHh----C------
Q 005045 540 HVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNGQV-------SILGDIYSYGILLLEMFT----G------ 602 (717)
Q Consensus 540 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-------~~~sDvwslG~vl~ellt----g------ 602 (717)
.|+|+|+|.......+.. ....-...||..|||||++.... ...+||||||.|+||+.- |
T Consensus 356 ~IADLGLAv~h~~~t~~i---di~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey 432 (513)
T KOG2052|consen 356 CIADLGLAVRHDSDTDTI---DIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEY 432 (513)
T ss_pred EEeeceeeEEecccCCcc---cCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhh
Confidence 999999998763322111 11223467999999999976532 356899999999999874 2
Q ss_pred CCCCCCCCCCchhhhHHHHhcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhh
Q 005045 603 KRPTGDMFKDDFSIHMFVSMALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGL 682 (717)
Q Consensus 603 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 682 (717)
+.||.+.-+.+.++.+.-.. +....+.. .....+...++...+.++++
T Consensus 433 ~~Pyyd~Vp~DPs~eeMrkV--------VCv~~~RP------------------------~ipnrW~s~~~l~~m~klMk 480 (513)
T KOG2052|consen 433 QLPYYDVVPSDPSFEEMRKV--------VCVQKLRP------------------------NIPNRWKSDPALRVMAKLMK 480 (513)
T ss_pred cCCcccCCCCCCCHHHHhcc--------eeecccCC------------------------CCCcccccCHHHHHHHHHHH
Confidence 35777765555444322111 11111111 11222344556778899999
Q ss_pred ccCCCCcCCCCCHHHHHHHHHHHHH
Q 005045 683 MCSTTSPRERIAMNVVVNNLKTIRN 707 (717)
Q Consensus 683 ~cl~~~p~~Rps~~eil~~l~~i~~ 707 (717)
.||..+|+-|-||=-|-..+.++.+
T Consensus 481 eCW~~Np~aRltALriKKtl~~l~~ 505 (513)
T KOG2052|consen 481 ECWYANPAARLTALRIKKTLAKLSN 505 (513)
T ss_pred HhhcCCchhhhHHHHHHHHHHHHhc
Confidence 9999999999999888888887775
No 362
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=99.97 E-value=4.9e-32 Score=277.82 Aligned_cols=253 Identities=27% Similarity=0.384 Sum_probs=197.1
Q ss_pred cccccccccCcccccceEEEEeC-CCchhhhHHhHhh---hhhHHHHHHHHHHHHhcCC-CCceeEEEEeeccccCCCCc
Q 005045 389 DNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQ---QQGALKSFIDECNALKSTR-HRNILRVITACSSVDLEGND 463 (717)
Q Consensus 389 ~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~-h~ni~~~~~~~~~~~~~~~~ 463 (717)
++|.+.+.||+|++|.||.|... +++.||+|++... .......+.+|+++++++. |+||+++++. +..++
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~-----~~~~~ 75 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYT-----FQDEE 75 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHH-----hcCCc
Confidence 47999999999999999999965 7999999988653 2233467888999999998 9999999888 44556
Q ss_pred eEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEee
Q 005045 464 FKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGD 543 (717)
Q Consensus 464 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~D 543 (717)
..++|||++++++|.+++... ..+++..+..++.|++.|++|||+. +++|+||+|+||+++.++.++++|
T Consensus 76 ~~~lv~e~~~~~~L~~~l~~~-------~~l~~~~~~~i~~ql~~~l~~Lh~~---~~~H~dl~~~ni~i~~~~~~~l~d 145 (280)
T cd05581 76 NLYFVLEYAPNGELLQYIRKY-------GSLDEKCTRFYAAEILLALEYLHSK---GIIHRDLKPENILLDKDMHIKITD 145 (280)
T ss_pred eEEEEEcCCCCCcHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEecC
Confidence 899999999999999999754 4689999999999999999999997 999999999999999999999999
Q ss_pred eccchhcccccCCCC-------------CCcceeecccccccccCCCccC-CCCCcccchhhHHHHHHHHHhCCCCCCCC
Q 005045 544 FGLAKFLFEISDNPS-------------KNQTVSIGLKGSIGYIPPEHMN-GQVSILGDIYSYGILLLEMFTGKRPTGDM 609 (717)
Q Consensus 544 fg~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~y~aPE~~~-~~~~~~sDvwslG~vl~elltg~~p~~~~ 609 (717)
||.+........... ..........++..|+|||... +.++.++||||||+++|++++|..||...
T Consensus 146 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~ 225 (280)
T cd05581 146 FGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGS 225 (280)
T ss_pred CccccccCCccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCc
Confidence 999886633221100 0012223455788999999954 45789999999999999999999999754
Q ss_pred CCCchhhhHHHHhcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCc
Q 005045 610 FKDDFSIHMFVSMALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSP 689 (717)
Q Consensus 610 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p 689 (717)
... ... ..+...... .+...+..+.+++.+||+.+|
T Consensus 226 ~~~-~~~------------~~~~~~~~~-------------------------------~~~~~~~~~~~li~~~l~~~p 261 (280)
T cd05581 226 NEY-LTF------------QKILKLEYS-------------------------------FPPNFPPDAKDLIEKLLVLDP 261 (280)
T ss_pred cHH-HHH------------HHHHhcCCC-------------------------------CCCccCHHHHHHHHHHhcCCH
Confidence 311 000 000000000 111124567899999999999
Q ss_pred CCCCCH----HHHHH
Q 005045 690 RERIAM----NVVVN 700 (717)
Q Consensus 690 ~~Rps~----~eil~ 700 (717)
++|||+ +|+++
T Consensus 262 ~~R~~~~~~~~~ll~ 276 (280)
T cd05581 262 QDRLGVNEGYDELKA 276 (280)
T ss_pred hhCCCcccCHHHHhc
Confidence 999999 77764
No 363
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=99.97 E-value=4.1e-32 Score=286.27 Aligned_cols=282 Identities=21% Similarity=0.261 Sum_probs=196.0
Q ss_pred ccccccccccCcccccceEEEEeC-CCchhhhHHhHhh--hhhHHHHHHHHHHHHhcCCCCceeEEEEeecccc-CCCCc
Q 005045 388 TDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQ--QQGALKSFIDECNALKSTRHRNILRVITACSSVD-LEGND 463 (717)
Q Consensus 388 ~~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~-~~~~~ 463 (717)
.++|.+.+.||+|++|.||.|.+. +|+.||+|.+... .......+.+|+++++.++||||+++++++.... .....
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 93 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ 93 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence 478999999999999999999965 7899999987643 2223456788999999999999999999865432 12224
Q ss_pred eEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEee
Q 005045 464 FKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGD 543 (717)
Q Consensus 464 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~D 543 (717)
..++|+||+. .++.++.. ..+++..+..++.|++.|++|||+. +++||||+|+||+++.++.+||+|
T Consensus 94 ~~~lv~e~~~-~~l~~~~~---------~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dlkp~NIll~~~~~~kL~d 160 (342)
T cd07879 94 DFYLVMPYMQ-TDLQKIMG---------HPLSEDKVQYLVYQMLCGLKYIHSA---GIIHRDLKPGNLAVNEDCELKILD 160 (342)
T ss_pred eEEEEecccc-cCHHHHHc---------CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEee
Confidence 5799999985 47766653 3578899999999999999999998 999999999999999999999999
Q ss_pred eccchhcccccCCCCCCcceeecccccccccCCCccCC--CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHHH
Q 005045 544 FGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG--QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVS 621 (717)
Q Consensus 544 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~ 621 (717)
||.+..... ......++..|+|||.+.+ .++.++|||||||++|||++|+.||....... .......
T Consensus 161 fg~~~~~~~----------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~-~~~~~~~ 229 (342)
T cd07879 161 FGLARHADA----------EMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD-QLTQILK 229 (342)
T ss_pred CCCCcCCCC----------CCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHH
Confidence 999875311 1123456788999999654 47899999999999999999999997532111 1111100
Q ss_pred --hcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHH
Q 005045 622 --MALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVV 699 (717)
Q Consensus 622 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil 699 (717)
...+..+.+.+..... ...... ..... ........+..+..+.+++.+||+.+|++||+++|++
T Consensus 230 ~~~~~~~~~~~~~~~~~~----------~~~~~~---~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l 295 (342)
T cd07879 230 VTGVPGPEFVQKLEDKAA----------KSYIKS---LPKYP-RKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEAL 295 (342)
T ss_pred hcCCCCHHHHHHhcccch----------HHHHhh---cCCcc-cchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHh
Confidence 0000111111110000 000000 00000 0000000112345678999999999999999999999
Q ss_pred HH--HHHHHH
Q 005045 700 NN--LKTIRN 707 (717)
Q Consensus 700 ~~--l~~i~~ 707 (717)
+. ++..+.
T Consensus 296 ~h~~f~~~~~ 305 (342)
T cd07879 296 EHPYFDSFRD 305 (342)
T ss_pred cCcchhhccc
Confidence 54 666654
No 364
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=99.97 E-value=6.1e-32 Score=280.73 Aligned_cols=249 Identities=24% Similarity=0.325 Sum_probs=191.7
Q ss_pred cccccccccccCcccccceEEEEeC-CCchhhhHHhHhh---hhhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCC
Q 005045 387 STDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQ---QQGALKSFIDECNALKSTRHRNILRVITACSSVDLEGN 462 (717)
Q Consensus 387 ~~~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~ 462 (717)
....|...+.+|+|++|.||+|+.+ +++.+++|.+... .......+.+|+++++.++|+|++++.+++.. .
T Consensus 13 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~ 87 (308)
T cd06634 13 PEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLR-----E 87 (308)
T ss_pred cHHHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEc-----C
Confidence 4567999999999999999999965 6788999987532 22334567889999999999999999998543 4
Q ss_pred ceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEe
Q 005045 463 DFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVG 542 (717)
Q Consensus 463 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~ 542 (717)
...++||||+. +++.+++.... ..+++..+..++.|++.|+.|||+. +++||||+|+||+++.++.++|+
T Consensus 88 ~~~~lv~e~~~-~~l~~~~~~~~------~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~kl~ 157 (308)
T cd06634 88 HTAWLVMEYCL-GSASDLLEVHK------KPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLG 157 (308)
T ss_pred CeeEEEEEccC-CCHHHHHHHcC------CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHhEEECCCCcEEEC
Confidence 58899999996 68877765332 4578999999999999999999997 99999999999999999999999
Q ss_pred eeccchhcccccCCCCCCcceeecccccccccCCCccC----CCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhH
Q 005045 543 DFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMN----GQVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHM 618 (717)
Q Consensus 543 Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~----~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~ 618 (717)
|||.+..... .....++..|+|||.+. +.++.++|||||||++|+|++|..||.......... .
T Consensus 158 dfg~~~~~~~-----------~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~-~ 225 (308)
T cd06634 158 DFGSASIMAP-----------ANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALY-H 225 (308)
T ss_pred CcccceeecC-----------cccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHH-H
Confidence 9998875411 11234778899999953 357889999999999999999999986532111100 0
Q ss_pred HHHhcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHH
Q 005045 619 FVSMALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVV 698 (717)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ei 698 (717)
...... +.. ....++..+.+++.+||+.+|++||++.++
T Consensus 226 ~~~~~~---------~~~--------------------------------~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l 264 (308)
T cd06634 226 IAQNES---------PAL--------------------------------QSGHWSEYFRNFVDSCLQKIPQDRPTSEVL 264 (308)
T ss_pred HhhcCC---------CCc--------------------------------CcccccHHHHHHHHHHhhCCcccCCCHHHH
Confidence 000000 000 011235567899999999999999999999
Q ss_pred HHHHH
Q 005045 699 VNNLK 703 (717)
Q Consensus 699 l~~l~ 703 (717)
++.-.
T Consensus 265 l~~~~ 269 (308)
T cd06634 265 LKHRF 269 (308)
T ss_pred hhCcc
Confidence 86543
No 365
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=99.97 E-value=1.3e-31 Score=271.55 Aligned_cols=241 Identities=23% Similarity=0.338 Sum_probs=181.3
Q ss_pred cccCcccccceEEEEeC-CCchhhhHHhHhhh---hhHHHHHHHHHHH-HhcCCCCceeEEEEeeccccCCCCceEEEEE
Q 005045 395 NLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQ---QGALKSFIDECNA-LKSTRHRNILRVITACSSVDLEGNDFKALVF 469 (717)
Q Consensus 395 ~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~-l~~l~h~ni~~~~~~~~~~~~~~~~~~~lv~ 469 (717)
+.+|+|++|.||+|... +++.||+|.+.... ......+..|..+ .....|+|++++++.+ ...+..++||
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~-----~~~~~~~lv~ 76 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSF-----QSKDYLYLVM 76 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeE-----EcCCeEEEEE
Confidence 56899999999999964 78899999886432 1222334445444 4455899999999985 3456899999
Q ss_pred ecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeeccchh
Q 005045 470 EFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKF 549 (717)
Q Consensus 470 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~ 549 (717)
||+++++|.+++... ..+++..+..++.|++.||.|||+. +++||||+|+||+++.++.++|+|||.+..
T Consensus 77 e~~~~~~L~~~l~~~-------~~~~~~~~~~i~~qi~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~ 146 (260)
T cd05611 77 EYLNGGDCASLIKTL-------GGLPEDWAKQYIAEVVLGVEDLHQR---GIIHRDIKPENLLIDQTGHLKLTDFGLSRN 146 (260)
T ss_pred eccCCCCHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEeeccccee
Confidence 999999999998754 4588999999999999999999997 999999999999999999999999998875
Q ss_pred cccccCCCCCCcceeecccccccccCCCccCCC-CCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHHHhcCChhh
Q 005045 550 LFEISDNPSKNQTVSIGLKGSIGYIPPEHMNGQ-VSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVSMALPDHV 628 (717)
Q Consensus 550 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 628 (717)
... .....++..|+|||.+.+. ++.++||||||+++|+|++|..||....... .......
T Consensus 147 ~~~-----------~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~------- 207 (260)
T cd05611 147 GLE-----------NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDA-VFDNILS------- 207 (260)
T ss_pred ccc-----------cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHH-HHHHHHh-------
Confidence 311 1224578889999997654 6899999999999999999999996532211 0000000
Q ss_pred hhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHHH
Q 005045 629 MDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVNN 701 (717)
Q Consensus 629 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~~ 701 (717)
...... ......++..+.+++.+||+.+|++|||+.++.+.
T Consensus 208 -----~~~~~~---------------------------~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~ 248 (260)
T cd05611 208 -----RRINWP---------------------------EEVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEI 248 (260)
T ss_pred -----cccCCC---------------------------CcccccCCHHHHHHHHHHccCCHHHccCCCcHHHH
Confidence 000000 00111235678899999999999999987655443
No 366
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.97 E-value=2.4e-32 Score=288.19 Aligned_cols=280 Identities=22% Similarity=0.282 Sum_probs=197.3
Q ss_pred ccccccccccccccCcccccceEEEEeC-CCchhhhHHhHhh--hhhHHHHHHHHHHHHhcCCCCceeEEEEeeccccC-
Q 005045 384 ISKSTDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQ--QQGALKSFIDECNALKSTRHRNILRVITACSSVDL- 459 (717)
Q Consensus 384 ~~~~~~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~- 459 (717)
.....++|++.+.||+|++|.||.|... +++.||+|++... .......+.+|+.+++++.|+|++++.+.+.....
T Consensus 10 ~~~~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 89 (343)
T cd07851 10 VWEVPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSL 89 (343)
T ss_pred eecccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccc
Confidence 3445779999999999999999999965 6889999987643 22334567789999999999999998876533221
Q ss_pred CCCceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCce
Q 005045 460 EGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTA 539 (717)
Q Consensus 460 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~ 539 (717)
......++|+||+ +++|.+++.. ..+++..+..++.|++.|++|||+. |++||||+|+||+++.++.+
T Consensus 90 ~~~~~~~lv~e~~-~~~L~~~~~~--------~~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nill~~~~~~ 157 (343)
T cd07851 90 EDFQDVYLVTHLM-GADLNNIVKC--------QKLSDDHIQFLVYQILRGLKYIHSA---GIIHRDLKPSNIAVNEDCEL 157 (343)
T ss_pred cccccEEEEEecC-CCCHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCE
Confidence 2223589999998 6799998864 3589999999999999999999998 99999999999999999999
Q ss_pred EEeeeccchhcccccCCCCCCcceeecccccccccCCCccCC--CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhh
Q 005045 540 HVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG--QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIH 617 (717)
Q Consensus 540 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~ 617 (717)
+|+|||.+...... .....++..|+|||.+.+ .++.++|||||||++|+|++|..||....... ...
T Consensus 158 kL~dfg~~~~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~-~~~ 226 (343)
T cd07851 158 KILDFGLARHTDDE----------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHID-QLK 226 (343)
T ss_pred EEcccccccccccc----------ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHH-HHH
Confidence 99999998765211 123457888999999644 47899999999999999999999997542211 111
Q ss_pred HHHHh--cCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCH
Q 005045 618 MFVSM--ALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAM 695 (717)
Q Consensus 618 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~ 695 (717)
..... ..++.+.. ... ......+..... ......-.......+.++.+++.+|++.+|++|||+
T Consensus 227 ~i~~~~~~~~~~~~~----~~~------~~~~~~~~~~~~----~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~ 292 (343)
T cd07851 227 RIMNLVGTPDEELLQ----KIS------SESARNYIQSLP----QMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITA 292 (343)
T ss_pred HHHHhcCCCCHHHHh----hcc------chhHHHHHHhcc----ccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCH
Confidence 11000 01111100 000 000011110000 000000000111225678999999999999999999
Q ss_pred HHHHH
Q 005045 696 NVVVN 700 (717)
Q Consensus 696 ~eil~ 700 (717)
.||++
T Consensus 293 ~ell~ 297 (343)
T cd07851 293 AEALA 297 (343)
T ss_pred HHHhc
Confidence 99975
No 367
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=99.97 E-value=7.3e-32 Score=277.03 Aligned_cols=197 Identities=28% Similarity=0.369 Sum_probs=162.3
Q ss_pred cccccccCcccccceEEEEeC-CCchhhhHHhHhhhh-hHHHHHHHHHHHHhcCC-CCceeEEEEeeccccCCCCceEEE
Q 005045 391 FSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQQ-GALKSFIDECNALKSTR-HRNILRVITACSSVDLEGNDFKAL 467 (717)
Q Consensus 391 y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~-h~ni~~~~~~~~~~~~~~~~~~~l 467 (717)
|++.+.||+|++|.||.|... +++.|++|.+..... .......+|+..++++. |+|++++++.+. .++..++
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~-----~~~~~~l 75 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFR-----ENDELYF 75 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhh-----cCCcEEE
Confidence 678899999999999999965 688899998765422 12234457899999998 999999999853 4568999
Q ss_pred EEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeeccc
Q 005045 468 VFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLA 547 (717)
Q Consensus 468 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~ 547 (717)
||||+ ++++.+++..... ..+++..+..++.|++.|+.|||++ +++|+||+|+||+++.++.++|+|||.+
T Consensus 76 v~e~~-~~~l~~~~~~~~~-----~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~dl~~~ni~i~~~~~~~l~d~~~~ 146 (283)
T cd07830 76 VFEYM-EGNLYQLMKDRKG-----KPFSESVIRSIIYQILQGLAHIHKH---GFFHRDLKPENLLVSGPEVVKIADFGLA 146 (283)
T ss_pred EEecC-CCCHHHHHHhccc-----ccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCCEEEeecccc
Confidence 99999 7899988875421 4689999999999999999999997 9999999999999999999999999998
Q ss_pred hhcccccCCCCCCcceeecccccccccCCCccCC--CCCcccchhhHHHHHHHHHhCCCCCCCC
Q 005045 548 KFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG--QVSILGDIYSYGILLLEMFTGKRPTGDM 609 (717)
Q Consensus 548 ~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~sDvwslG~vl~elltg~~p~~~~ 609 (717)
...... .......++..|+|||++.+ .++.++|+||||+++|+|++|..||...
T Consensus 147 ~~~~~~--------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~ 202 (283)
T cd07830 147 REIRSR--------PPYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGS 202 (283)
T ss_pred eeccCC--------CCcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCC
Confidence 755211 11122457888999998643 4789999999999999999999999665
No 368
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=99.97 E-value=7.4e-32 Score=283.28 Aligned_cols=205 Identities=23% Similarity=0.284 Sum_probs=164.7
Q ss_pred ccccccccCcccccceEEEEeC-C--CchhhhHHhHhh--hhhHHHHHHHHHHHHhcC-CCCceeEEEEeeccccCCCCc
Q 005045 390 NFSKENLIGTGSFGSVYKGTLG-D--GTIVAIKVLKLQ--QQGALKSFIDECNALKST-RHRNILRVITACSSVDLEGND 463 (717)
Q Consensus 390 ~y~~~~~ig~g~~g~v~~~~~~-~--~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~~~~~~~ 463 (717)
+|++.+.||+|+||.||.+... . ++.||+|.+... .....+.+.+|+++++++ .||||+++++.+... .....
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~-~~~~~ 79 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVF-PGNFN 79 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeec-cccCC
Confidence 5888999999999999999965 4 778999987643 222346678899999999 599999999875432 12334
Q ss_pred eEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEee
Q 005045 464 FKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGD 543 (717)
Q Consensus 464 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~D 543 (717)
..+++++++. ++|.+++... ..+++..++.++.||+.||+|||+. |++||||||+||+++.++.+||+|
T Consensus 80 ~~~~~~e~~~-~~L~~~l~~~-------~~~~~~~~~~~~~qi~~aL~~LH~~---givH~dlkp~Nili~~~~~~kl~D 148 (332)
T cd07857 80 ELYLYEELME-ADLHQIIRSG-------QPLTDAHFQSFIYQILCGLKYIHSA---NVLHRDLKPGNLLVNADCELKICD 148 (332)
T ss_pred cEEEEEeccc-CCHHHHHhcC-------CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHeEEcCCCCEEeCc
Confidence 6789999985 6899888654 5689999999999999999999997 999999999999999999999999
Q ss_pred eccchhcccccCCCCCCcceeecccccccccCCCccCC--CCCcccchhhHHHHHHHHHhCCCCCCCC
Q 005045 544 FGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG--QVSILGDIYSYGILLLEMFTGKRPTGDM 609 (717)
Q Consensus 544 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~sDvwslG~vl~elltg~~p~~~~ 609 (717)
||.+......... .........|+..|+|||.+.+ .++.++||||+||++|+|++|..||...
T Consensus 149 fg~a~~~~~~~~~---~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~ 213 (332)
T cd07857 149 FGLARGFSENPGE---NAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGK 213 (332)
T ss_pred CCCceeccccccc---ccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCC
Confidence 9999765322111 1111223468899999998644 4789999999999999999999999754
No 369
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=99.97 E-value=1.2e-31 Score=275.96 Aligned_cols=254 Identities=23% Similarity=0.295 Sum_probs=192.1
Q ss_pred ccccccccCcccccceEEEEeC----CCchhhhHHhHhhh----hhHHHHHHHHHHHHhcC-CCCceeEEEEeeccccCC
Q 005045 390 NFSKENLIGTGSFGSVYKGTLG----DGTIVAIKVLKLQQ----QGALKSFIDECNALKST-RHRNILRVITACSSVDLE 460 (717)
Q Consensus 390 ~y~~~~~ig~g~~g~v~~~~~~----~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~~~~ 460 (717)
+|++.+.||+|++|.||.++.. +++.||+|.+.... ......+.+|+++++++ +||+|+++.+. +.
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~-----~~ 75 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYA-----FQ 75 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhhee-----ee
Confidence 4888999999999999998842 56789999876332 23346788999999999 69999999887 44
Q ss_pred CCceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceE
Q 005045 461 GNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAH 540 (717)
Q Consensus 461 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~k 540 (717)
.++..++||||+++++|.+++... ..+++..+..++.|+++||+|||+. +++||||+|+||+++.++.++
T Consensus 76 ~~~~~~lv~e~~~~~~L~~~~~~~-------~~~~~~~~~~~~~ql~~~l~~lH~~---~~~H~dl~p~nil~~~~~~~~ 145 (288)
T cd05583 76 TDTKLHLILDYVNGGELFTHLYQR-------EHFTESEVRVYIAEIVLALDHLHQL---GIIYRDIKLENILLDSEGHVV 145 (288)
T ss_pred cCCEEEEEEecCCCCcHHHHHhhc-------CCcCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEE
Confidence 556899999999999999998654 4578899999999999999999997 999999999999999999999
Q ss_pred EeeeccchhcccccCCCCCCcceeecccccccccCCCccCCC---CCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhh
Q 005045 541 VGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNGQ---VSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIH 617 (717)
Q Consensus 541 l~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~ 617 (717)
|+|||.+....... ........++..|+|||...+. .+.++||||||+++|+|++|..||....... ...
T Consensus 146 l~dfg~~~~~~~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~-~~~ 218 (288)
T cd05583 146 LTDFGLSKEFLAEE------EERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQN-SQS 218 (288)
T ss_pred EEECcccccccccc------ccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccc-hHH
Confidence 99999987642211 1111234578899999996543 6889999999999999999999986422111 000
Q ss_pred HHHHhcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHH
Q 005045 618 MFVSMALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNV 697 (717)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~e 697 (717)
.... .+..... ..+..++..+.+++.+||+.+|++|||+++
T Consensus 219 ~~~~--------~~~~~~~-------------------------------~~~~~~~~~l~~li~~~l~~~p~~R~t~~~ 259 (288)
T cd05583 219 EISR--------RILKSKP-------------------------------PFPKTMSAEARDFIQKLLEKDPKKRLGANG 259 (288)
T ss_pred HHHH--------HHHccCC-------------------------------CCCcccCHHHHHHHHHHhcCCHhhccCcch
Confidence 0000 0000000 011112456788999999999999999887
Q ss_pred HHHHHHH
Q 005045 698 VVNNLKT 704 (717)
Q Consensus 698 il~~l~~ 704 (717)
+.+.++-
T Consensus 260 ~~~~l~~ 266 (288)
T cd05583 260 ADEIKNH 266 (288)
T ss_pred HHHHhcC
Confidence 7665543
No 370
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=99.97 E-value=1.2e-31 Score=282.41 Aligned_cols=278 Identities=20% Similarity=0.289 Sum_probs=193.6
Q ss_pred ccccccc-ccccCcccccceEEEEeC-CCchhhhHHhHhhhhhH--------------HHHHHHHHHHHhcCCCCceeEE
Q 005045 387 STDNFSK-ENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQQGA--------------LKSFIDECNALKSTRHRNILRV 450 (717)
Q Consensus 387 ~~~~y~~-~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~~~~--------------~~~~~~e~~~l~~l~h~ni~~~ 450 (717)
..++|.. .+.||+|++|.||+|.++ +++.||+|.+....... ...+.+|++++++++|+||+++
T Consensus 6 ~~~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~ 85 (335)
T PTZ00024 6 ISERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGL 85 (335)
T ss_pred cccchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeee
Confidence 3567765 577999999999999965 78999999886432111 1246789999999999999999
Q ss_pred EEeeccccCCCCceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCC
Q 005045 451 ITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSN 530 (717)
Q Consensus 451 ~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~N 530 (717)
++.+ ...+..++||||++ +++.+++... ..+++..+..++.|++.|++|||+. +++||||+|+|
T Consensus 86 ~~~~-----~~~~~~~lv~e~~~-~~l~~~l~~~-------~~~~~~~~~~~~~ql~~aL~~LH~~---~i~H~dl~~~n 149 (335)
T PTZ00024 86 VDVY-----VEGDFINLVMDIMA-SDLKKVVDRK-------IRLTESQVKCILLQILNGLNVLHKW---YFMHRDLSPAN 149 (335)
T ss_pred eEEE-----ecCCcEEEEEeccc-cCHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHH
Confidence 9985 34558999999996 6899988654 4689999999999999999999997 99999999999
Q ss_pred EEeCCCCceEEeeeccchhcccccCCCC-------CCcceeecccccccccCCCccCC--CCCcccchhhHHHHHHHHHh
Q 005045 531 VLLDKDMTAHVGDFGLAKFLFEISDNPS-------KNQTVSIGLKGSIGYIPPEHMNG--QVSILGDIYSYGILLLEMFT 601 (717)
Q Consensus 531 Ill~~~~~~kl~Dfg~~~~~~~~~~~~~-------~~~~~~~~~~~~~~y~aPE~~~~--~~~~~sDvwslG~vl~ellt 601 (717)
|+++.++.++|+|||.+........... ..........++..|+|||.+.+ .++.++|||||||++|+|++
T Consensus 150 ill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~t 229 (335)
T PTZ00024 150 IFINSKGICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLT 229 (335)
T ss_pred eEECCCCCEEECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHh
Confidence 9999999999999999876531110000 00111122346788999999755 36899999999999999999
Q ss_pred CCCCCCCCCCCchhhhHHHHh---cCChhhhhhcCCCCCCCC-CCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHH
Q 005045 602 GKRPTGDMFKDDFSIHMFVSM---ALPDHVMDILDPSMPLDE-ENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSV 677 (717)
Q Consensus 602 g~~p~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 677 (717)
|..||....+.+. ....... .....+.+..+-...... ........ .....++..+
T Consensus 230 g~~p~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~ 289 (335)
T PTZ00024 230 GKPLFPGENEIDQ-LGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLK-------------------TIFPNASDDA 289 (335)
T ss_pred CCCCCCCCCHHHH-HHHHHHHhCCCchhhCcchhhcccccccCcCCcccHH-------------------HhCcCCChHH
Confidence 9999976533211 1111100 000001100000000000 00000000 0111235567
Q ss_pred HHHhhccCCCCcCCCCCHHHHHH
Q 005045 678 LRIGLMCSTTSPRERIAMNVVVN 700 (717)
Q Consensus 678 ~~li~~cl~~~p~~Rps~~eil~ 700 (717)
.+++.+|++.+|++|||+.|++.
T Consensus 290 ~~li~~~l~~~P~~R~s~~~~l~ 312 (335)
T PTZ00024 290 IDLLQSLLKLNPLERISAKEALK 312 (335)
T ss_pred HHHHHHHcCCCchhccCHHHHhc
Confidence 89999999999999999999986
No 371
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=99.97 E-value=2.2e-31 Score=277.19 Aligned_cols=244 Identities=25% Similarity=0.318 Sum_probs=188.0
Q ss_pred ccccccccCcccccceEEEEeC-CCchhhhHHhHhhh---hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceE
Q 005045 390 NFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQ---QGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFK 465 (717)
Q Consensus 390 ~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~ 465 (717)
.|...+++|+|++|.||.|+.. +++.|++|.+.... ......+.+|+++++.++|||++++++++. +....
T Consensus 22 ~~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~~~~ 96 (313)
T cd06633 22 IFVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYL-----KEHTA 96 (313)
T ss_pred HhhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEE-----eCCEE
Confidence 4777788999999999999964 78899999886432 233456788999999999999999999954 34588
Q ss_pred EEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeec
Q 005045 466 ALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFG 545 (717)
Q Consensus 466 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg 545 (717)
++||||+. +++.+++.... ..+++..+..++.||+.|++|||+. +++||||+|+||+++.++.++|+|||
T Consensus 97 ~lv~e~~~-~~l~~~l~~~~------~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dl~p~nili~~~~~~kL~dfg 166 (313)
T cd06633 97 WLVMEYCL-GSASDLLEVHK------KPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFG 166 (313)
T ss_pred EEEEecCC-CCHHHHHHhcC------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChhhEEECCCCCEEEeecC
Confidence 99999995 57777775432 4588999999999999999999997 99999999999999999999999999
Q ss_pred cchhcccccCCCCCCcceeecccccccccCCCccC----CCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHHH
Q 005045 546 LAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMN----GQVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVS 621 (717)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~----~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~ 621 (717)
.+.... ......++..|+|||.+. +.++.++|||||||++|+|++|..||........ .....
T Consensus 167 ~~~~~~-----------~~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~--~~~~~ 233 (313)
T cd06633 167 SASKSS-----------PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA--LYHIA 233 (313)
T ss_pred CCcccC-----------CCCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHH--HHHHH
Confidence 876421 111245788899999963 3478899999999999999999999865422111 10000
Q ss_pred hcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHHH
Q 005045 622 MALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVNN 701 (717)
Q Consensus 622 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~~ 701 (717)
.. ..+.. .....+..+.+++.+||+.+|++||++.|+++.
T Consensus 234 ~~-----------~~~~~-----------------------------~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~ 273 (313)
T cd06633 234 QN-----------DSPTL-----------------------------QSNEWTDSFRGFVDYCLQKIPQERPASAELLRH 273 (313)
T ss_pred hc-----------CCCCC-----------------------------CccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00 00000 001124457889999999999999999999963
No 372
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=99.97 E-value=5.9e-32 Score=274.74 Aligned_cols=249 Identities=24% Similarity=0.360 Sum_probs=188.3
Q ss_pred cCcccccceEEEEeC-CCchhhhHHhHhhhh---hHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceEEEEEecC
Q 005045 397 IGTGSFGSVYKGTLG-DGTIVAIKVLKLQQQ---GALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFKALVFEFM 472 (717)
Q Consensus 397 ig~g~~g~v~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~lv~e~~ 472 (717)
+|.|++|.||.|.+. +|+.+++|.+..... .....+.+|++++++++||||+++++.+ ......|++|||+
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~-----~~~~~~~lv~e~~ 75 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSF-----QGKKNLYLVMEYL 75 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHhe-----ecCcEEEEEEecC
Confidence 689999999999976 699999998865432 4567788999999999999999998874 4556899999999
Q ss_pred CCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeeccchhccc
Q 005045 473 SNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFE 552 (717)
Q Consensus 473 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 552 (717)
++++|.+++.+. ..+++..+..++.||+.||+|||+. +++||||+|+||+++.++.++|+|||.+.....
T Consensus 76 ~~~~L~~~l~~~-------~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~ 145 (265)
T cd05579 76 PGGDLASLLENV-------GSLDEDVARIYIAEIVLALEYLHSN---GIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLV 145 (265)
T ss_pred CCCcHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHc---CeecCCCCHHHeEEcCCCCEEEEecccchhccc
Confidence 999999998754 4689999999999999999999998 999999999999999999999999999876421
Q ss_pred ccCCC-CCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHHHhcCChhhhh
Q 005045 553 ISDNP-SKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVSMALPDHVMD 630 (717)
Q Consensus 553 ~~~~~-~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 630 (717)
..... ...........++..|+|||...+ ..+.++||||||+++|++++|..||........ .. .
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~--~~-----------~ 212 (265)
T cd05579 146 RRQINLNDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEI--FQ-----------N 212 (265)
T ss_pred CcccccccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHH--HH-----------H
Confidence 11000 000112233457788999999544 478999999999999999999999965432110 00 0
Q ss_pred hcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHHHH
Q 005045 631 ILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVNNL 702 (717)
Q Consensus 631 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~~l 702 (717)
......... .....+..+.+++.+|++.+|++|||++++.+.+
T Consensus 213 ~~~~~~~~~-----------------------------~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l 255 (265)
T cd05579 213 ILNGKIEWP-----------------------------EDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIK 255 (265)
T ss_pred HhcCCcCCC-----------------------------ccccCCHHHHHHHHHHhcCCHhhcCCCccHHHHh
Confidence 000000000 0000155678999999999999999995555444
No 373
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=99.97 E-value=9.9e-32 Score=277.76 Aligned_cols=256 Identities=22% Similarity=0.325 Sum_probs=190.2
Q ss_pred cccccccccccccCcccccceEEEEeC-CCchhhhHHhHhhh-hhHHHHHHHHHHHHhcC-CCCceeEEEEeeccccCCC
Q 005045 385 SKSTDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQ-QGALKSFIDECNALKST-RHRNILRVITACSSVDLEG 461 (717)
Q Consensus 385 ~~~~~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~~~~~ 461 (717)
....++|++.+.+|+|++|.||+|.+. +++.||+|.+.... ......+..|+.++.+. .|+||+++++.+. .
T Consensus 11 ~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~-----~ 85 (296)
T cd06618 11 PADLNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFI-----T 85 (296)
T ss_pred cCCcchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeee-----c
Confidence 345678999999999999999999976 58999999986432 22345566677766666 5999999999853 3
Q ss_pred CceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEE
Q 005045 462 NDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHV 541 (717)
Q Consensus 462 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl 541 (717)
....+++|||++ +++.++..... ..+++..+..++.||+.|++|||+. .+++||||+|+||+++.++.+||
T Consensus 86 ~~~~~~v~e~~~-~~l~~l~~~~~------~~l~~~~~~~i~~~i~~~l~~lH~~--~~i~H~dl~p~nill~~~~~~kL 156 (296)
T cd06618 86 DSDVFICMELMS-TCLDKLLKRIQ------GPIPEDILGKMTVAIVKALHYLKEK--HGVIHRDVKPSNILLDASGNVKL 156 (296)
T ss_pred CCeEEEEeeccC-cCHHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHhh--CCEecCCCcHHHEEEcCCCCEEE
Confidence 458999999984 57777665422 4688999999999999999999973 28999999999999999999999
Q ss_pred eeeccchhcccccCCCCCCcceeecccccccccCCCccCCC-----CCcccchhhHHHHHHHHHhCCCCCCCCCCCchhh
Q 005045 542 GDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNGQ-----VSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSI 616 (717)
Q Consensus 542 ~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-----~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~ 616 (717)
+|||.+....... ......++..|+|||.+.+. ++.++||||||+++|+|++|..||.....+....
T Consensus 157 ~dfg~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~ 228 (296)
T cd06618 157 CDFGISGRLVDSK--------AKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVL 228 (296)
T ss_pred CccccchhccCCC--------cccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHH
Confidence 9999987652111 11123467889999997543 6889999999999999999999996432211111
Q ss_pred hHHHHhcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHH
Q 005045 617 HMFVSMALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMN 696 (717)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ 696 (717)
. ..........+ ....++.++.+++.+||+.+|++||++.
T Consensus 229 ~------------~~~~~~~~~~~----------------------------~~~~~~~~l~~li~~~l~~~p~~Rp~~~ 268 (296)
T cd06618 229 T------------KILQEEPPSLP----------------------------PNEGFSPDFCSFVDLCLTKDHRKRPKYR 268 (296)
T ss_pred H------------HHhcCCCCCCC----------------------------CCCCCCHHHHHHHHHHccCChhhCCCHH
Confidence 1 11111100000 0011255688999999999999999999
Q ss_pred HHHHHH
Q 005045 697 VVVNNL 702 (717)
Q Consensus 697 eil~~l 702 (717)
++++.-
T Consensus 269 ~il~~~ 274 (296)
T cd06618 269 ELLQHP 274 (296)
T ss_pred HHhcCh
Confidence 998653
No 374
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.97 E-value=2.8e-31 Score=273.59 Aligned_cols=198 Identities=25% Similarity=0.380 Sum_probs=164.4
Q ss_pred ccccccccCcccccceEEEEe----CCCchhhhHHhHhhh----hhHHHHHHHHHHHHhcC-CCCceeEEEEeeccccCC
Q 005045 390 NFSKENLIGTGSFGSVYKGTL----GDGTIVAIKVLKLQQ----QGALKSFIDECNALKST-RHRNILRVITACSSVDLE 460 (717)
Q Consensus 390 ~y~~~~~ig~g~~g~v~~~~~----~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~~~~ 460 (717)
+|++.+.||.|++|.||.|.. .+|+.||+|++.... ....+.+.+|+++++++ +|++|+++++.+ .
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~-----~ 75 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAF-----Q 75 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEe-----e
Confidence 488999999999999999985 368889999886432 22346778899999999 699999998884 4
Q ss_pred CCceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceE
Q 005045 461 GNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAH 540 (717)
Q Consensus 461 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~k 540 (717)
.+...++||||+++++|.+++... ..+++..+..++.|++.||+|||+. +++||||+|+||+++.++.+|
T Consensus 76 ~~~~~~lv~e~~~~~~L~~~l~~~-------~~l~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~k 145 (290)
T cd05613 76 TDTKLHLILDYINGGELFTHLSQR-------ERFKEQEVQIYSGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVV 145 (290)
T ss_pred cCCeEEEEEecCCCCcHHHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEECCCCCEE
Confidence 456889999999999999998754 4578899999999999999999997 999999999999999999999
Q ss_pred EeeeccchhcccccCCCCCCcceeecccccccccCCCccCC---CCCcccchhhHHHHHHHHHhCCCCCCC
Q 005045 541 VGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG---QVSILGDIYSYGILLLEMFTGKRPTGD 608 (717)
Q Consensus 541 l~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~---~~~~~sDvwslG~vl~elltg~~p~~~ 608 (717)
|+|||.+....... ........++..|+|||...+ .++.++||||||+++|+|++|..||..
T Consensus 146 l~dfg~~~~~~~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~ 210 (290)
T cd05613 146 LTDFGLSKEFHEDE------VERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTV 210 (290)
T ss_pred EeeCccceeccccc------ccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCc
Confidence 99999987542111 111123457889999999653 367899999999999999999999864
No 375
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97 E-value=1.4e-32 Score=252.04 Aligned_cols=212 Identities=25% Similarity=0.389 Sum_probs=174.4
Q ss_pred ccccccccccccCcccccceEEEEeC-CCchhhhHHhHhh--hhhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCC--
Q 005045 386 KSTDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQ--QQGALKSFIDECNALKSTRHRNILRVITACSSVDLE-- 460 (717)
Q Consensus 386 ~~~~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~-- 460 (717)
+..+.|....+||+|.||.||+|+.+ +|++||+|+.-.. ..+......+|++++..++|+|++.+++.|......
T Consensus 14 ~~~~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~ 93 (376)
T KOG0669|consen 14 DEVSKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTN 93 (376)
T ss_pred ecchHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcc
Confidence 34568999999999999999999954 7889999887653 334456677899999999999999999988665422
Q ss_pred -CCceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCce
Q 005045 461 -GNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTA 539 (717)
Q Consensus 461 -~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~ 539 (717)
+....|+||.+|+ -+|.-.+.... .+++..++.+++.+++.||.|+|.+ .|+|||+||.|++|+.+|.+
T Consensus 94 r~r~t~ylVf~~ce-hDLaGlLsn~~------vr~sls~Ikk~Mk~Lm~GL~~iHr~---kilHRDmKaaNvLIt~dgil 163 (376)
T KOG0669|consen 94 RDRATFYLVFDFCE-HDLAGLLSNRK------VRFSLSEIKKVMKGLMNGLYYIHRN---KILHRDMKAANVLITKDGIL 163 (376)
T ss_pred cccceeeeeHHHhh-hhHHHHhcCcc------ccccHHHHHHHHHHHHHHHHHHHHh---hHHhhcccHhhEEEcCCceE
Confidence 2335899999996 47887776543 6789999999999999999999998 99999999999999999999
Q ss_pred EEeeeccchhcccccCCCCCCcceeecccccccccCCCccCC--CCCcccchhhHHHHHHHHHhCCCCCCCCC
Q 005045 540 HVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG--QVSILGDIYSYGILLLEMFTGKRPTGDMF 610 (717)
Q Consensus 540 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~sDvwslG~vl~elltg~~p~~~~~ 610 (717)
||+|||+++.+.-..+. .....++..-|..|++||.+-| +++++.|||+-||++.||.||++-+.+..
T Consensus 164 klADFGlar~fs~~~n~---~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnt 233 (376)
T KOG0669|consen 164 KLADFGLARAFSTSKNV---VKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNT 233 (376)
T ss_pred Eeeccccccceeccccc---CCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCCh
Confidence 99999999766332221 1222455667999999999765 49999999999999999999999887653
No 376
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=99.97 E-value=8.1e-32 Score=284.20 Aligned_cols=285 Identities=21% Similarity=0.275 Sum_probs=199.8
Q ss_pred CcccccccccccccccccCcccccceEEEEe-CCCchhhhHHhHhh--hhhHHHHHHHHHHHHhcCCCCceeEEEEeecc
Q 005045 380 SYSDISKSTDNFSKENLIGTGSFGSVYKGTL-GDGTIVAIKVLKLQ--QQGALKSFIDECNALKSTRHRNILRVITACSS 456 (717)
Q Consensus 380 s~~~~~~~~~~y~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~ 456 (717)
...++....++|++.+.||+|++|.||.|.. .+++.||+|++... .....+.+.+|+.++++++||||+++++++..
T Consensus 8 ~~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~ 87 (345)
T cd07877 8 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 87 (345)
T ss_pred HHHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeee
Confidence 3445566778999999999999999999985 47899999988643 22234667889999999999999999987643
Q ss_pred cc-CCCCceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCC
Q 005045 457 VD-LEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDK 535 (717)
Q Consensus 457 ~~-~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~ 535 (717)
.. .......+++++++ +++|.+++.. ..+++..+..++.|++.|++|||+. +++||||||+||+++.
T Consensus 88 ~~~~~~~~~~~lv~~~~-~~~L~~~~~~--------~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~ 155 (345)
T cd07877 88 ARSLEEFNDVYLVTHLM-GADLNNIVKC--------QKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNE 155 (345)
T ss_pred cccccccccEEEEehhc-ccCHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEcC
Confidence 22 12234578899887 7899888753 3478999999999999999999998 9999999999999999
Q ss_pred CCceEEeeeccchhcccccCCCCCCcceeecccccccccCCCccCC--CCCcccchhhHHHHHHHHHhCCCCCCCCCCCc
Q 005045 536 DMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG--QVSILGDIYSYGILLLEMFTGKRPTGDMFKDD 613 (717)
Q Consensus 536 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~sDvwslG~vl~elltg~~p~~~~~~~~ 613 (717)
++.+||+|||.+..... ......++..|+|||.+.+ .++.++|||||||++|+|++|..||.......
T Consensus 156 ~~~~kl~dfg~~~~~~~----------~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~ 225 (345)
T cd07877 156 DCELKILDFGLARHTDD----------EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 225 (345)
T ss_pred CCCEEEecccccccccc----------cccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 99999999999875411 1123457888999999654 47889999999999999999999996532211
Q ss_pred hhhhHHHHh--cCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCC
Q 005045 614 FSIHMFVSM--ALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRE 691 (717)
Q Consensus 614 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~ 691 (717)
........ ..+..+...+... ............. ...-.+.....+..+.+++.+|++.+|.+
T Consensus 226 -~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~li~~~L~~dp~~ 290 (345)
T cd07877 226 -QLKLILRLVGTPGAELLKKISSE----------SARNYIQSLTQMP----KMNFANVFIGANPLAVDLLEKMLVLDSDK 290 (345)
T ss_pred -HHHHHHHHhCCCCHHHHhhcccH----------hHHHHHHHhcccC----CcchhhhcCCCCHHHHHHHHHHcCCChhh
Confidence 11111110 0111111101000 0001110000000 00000000112456789999999999999
Q ss_pred CCCHHHHHHH
Q 005045 692 RIAMNVVVNN 701 (717)
Q Consensus 692 Rps~~eil~~ 701 (717)
|||+.|+++.
T Consensus 291 R~t~~e~l~h 300 (345)
T cd07877 291 RITAAQALAH 300 (345)
T ss_pred cCCHHHHhcC
Confidence 9999999865
No 377
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=99.97 E-value=1.1e-31 Score=283.06 Aligned_cols=279 Identities=22% Similarity=0.254 Sum_probs=196.6
Q ss_pred cccccccccccccCcccccceEEEEeC-CCchhhhHHhHhh--hhhHHHHHHHHHHHHhcCCCCceeEEEEeecccc-CC
Q 005045 385 SKSTDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQ--QQGALKSFIDECNALKSTRHRNILRVITACSSVD-LE 460 (717)
Q Consensus 385 ~~~~~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~-~~ 460 (717)
....++|++.+.||+|++|.||.|... +++.||+|.+... .......+.+|++++++++||||+++++++.... ..
T Consensus 11 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 90 (343)
T cd07880 11 WEVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLD 90 (343)
T ss_pred hccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccc
Confidence 335678999999999999999999954 7899999987532 2233456789999999999999999999864322 11
Q ss_pred CCceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceE
Q 005045 461 GNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAH 540 (717)
Q Consensus 461 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~k 540 (717)
.....++||||+ +++|.+++.. ..+++..++.++.||+.|++|||+. +++||||+|+||+++.++.++
T Consensus 91 ~~~~~~lv~e~~-~~~l~~~~~~--------~~l~~~~~~~i~~qi~~al~~LH~~---gi~H~dlkp~Nill~~~~~~k 158 (343)
T cd07880 91 RFHDFYLVMPFM-GTDLGKLMKH--------EKLSEDRIQFLVYQMLKGLKYIHAA---GIIHRDLKPGNLAVNEDCELK 158 (343)
T ss_pred ccceEEEEEecC-CCCHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEE
Confidence 123568999998 7799888753 3578999999999999999999998 999999999999999999999
Q ss_pred EeeeccchhcccccCCCCCCcceeecccccccccCCCccCC--CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhH
Q 005045 541 VGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG--QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHM 618 (717)
Q Consensus 541 l~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~ 618 (717)
|+|||.+..... ......++..|+|||.+.+ .++.++|+||+||++|++++|..||........ ...
T Consensus 159 l~dfg~~~~~~~----------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~-~~~ 227 (343)
T cd07880 159 ILDFGLARQTDS----------EMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQ-LME 227 (343)
T ss_pred Eeeccccccccc----------CccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHH
Confidence 999999875411 1123456888999999654 478999999999999999999999975432111 111
Q ss_pred HHHh--cCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHH
Q 005045 619 FVSM--ALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMN 696 (717)
Q Consensus 619 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ 696 (717)
.... ..+..+...+.... .......... .... .-....+.++..+.+++.+|++.+|++|||+.
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~---~~~~-~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~ 293 (343)
T cd07880 228 IMKVTGTPSKEFVQKLQSED----------AKNYVKKLPR---FRKK-DFRSLLPNANPLAVNVLEKMLVLDAESRITAA 293 (343)
T ss_pred HHHhcCCCCHHHHHhhcchh----------HHHHHHhccc---cCcc-hHHHhccCCChHHHHHHHHHcCCChhhCCCHH
Confidence 1110 01111111111000 0000000000 0000 00001123355688999999999999999999
Q ss_pred HHHH
Q 005045 697 VVVN 700 (717)
Q Consensus 697 eil~ 700 (717)
++++
T Consensus 294 ~~l~ 297 (343)
T cd07880 294 EALA 297 (343)
T ss_pred HHhc
Confidence 9984
No 378
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.97 E-value=2.1e-31 Score=258.86 Aligned_cols=291 Identities=21% Similarity=0.325 Sum_probs=230.9
Q ss_pred ecccCCCCCCcccccCCCCcccccccccccccccccCcccccceEEEEeC------CCchhhhHHhHhhh-hhHHHHHHH
Q 005045 362 SSNDLNGTIPKEVRQSGMSYSDISKSTDNFSKENLIGTGSFGSVYKGTLG------DGTIVAIKVLKLQQ-QGALKSFID 434 (717)
Q Consensus 362 ~~N~l~~~~p~~~~~~~~s~~~~~~~~~~y~~~~~ig~g~~g~v~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~ 434 (717)
++|.+-..-|+++ .-...++.....+++....+.+|.||.||.|.|. +.+.|.+|.++... .-....+..
T Consensus 260 ~~ns~~~~~p~e~---~~r~~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~ 336 (563)
T KOG1024|consen 260 SPNSEYEHEPEEF---NRRLQELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQ 336 (563)
T ss_pred CCCccccCChHHH---hhhHHhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHH
Confidence 6666665555555 2346677777788999999999999999999653 35568889887543 335677888
Q ss_pred HHHHHhcCCCCceeEEEEeeccccCCCCceEEEEEecCCCCChhhhccCCC-CCcccccccCHHHHHHHHHHHHHHHHHH
Q 005045 435 ECNALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSP-AEHYQFKKLSVIQRLNIAIDVASALDYL 513 (717)
Q Consensus 435 e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~~~i~~~i~~~l~~L 513 (717)
|.-.+....|||+..+.+.+ .++.+..++++.+...|+|+.++.-.+ ......+.++..+...++.|++.|++||
T Consensus 337 es~lly~~sH~nll~V~~V~----ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hl 412 (563)
T KOG1024|consen 337 ESMLLYGASHPNLLSVLGVS----IEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHL 412 (563)
T ss_pred HHHHHhcCcCCCccceeEEE----eeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999998 456678899999999999999987221 1111236678888999999999999999
Q ss_pred HhcCCCCeeecCCCCCCEEeCCCCceEEeeeccchhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhH
Q 005045 514 HHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSY 592 (717)
Q Consensus 514 H~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwsl 592 (717)
|++ ++||.||.++|..|++.-+|||+|=.+++.+++.+.+.-.+... .+..||+||.+.. .++.++|||||
T Consensus 413 h~~---~ViHkDiAaRNCvIdd~LqVkltDsaLSRDLFP~DYhcLGDnEn-----RPvkWMslEal~n~~yssasDvWsf 484 (563)
T KOG1024|consen 413 HNH---GVIHKDIAARNCVIDDQLQVKLTDSALSRDLFPGDYHCLGDNEN-----RPVKWMSLEALQNSHYSSASDVWSF 484 (563)
T ss_pred Hhc---CcccchhhhhcceehhheeEEeccchhccccCcccccccCCCCC-----CcccccCHHHHhhhhhcchhhhHHH
Confidence 998 99999999999999999999999999999987777665554433 5678999999655 59999999999
Q ss_pred HHHHHHHHh-CCCCCCCCCCCchhhhHHHHhcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhH
Q 005045 593 GILLLEMFT-GKRPTGDMFKDDFSIHMFVSMALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLE 671 (717)
Q Consensus 593 G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (717)
||++|||+| |+.||.+.++.+..- ++... .. ..++-
T Consensus 485 GVllWELmtlg~~PyaeIDPfEm~~--------------ylkdG-------------------yR----------laQP~ 521 (563)
T KOG1024|consen 485 GVLLWELMTLGKLPYAEIDPFEMEH--------------YLKDG-------------------YR----------LAQPF 521 (563)
T ss_pred HHHHHHHHhcCCCCccccCHHHHHH--------------HHhcc-------------------ce----------ecCCC
Confidence 999999999 999998775443211 11111 00 01456
Q ss_pred HHHHHHHHHhhccCCCCcCCCCCHHHHHHHHHHHHHHHH
Q 005045 672 ECFVSVLRIGLMCSTTSPRERIAMNVVVNNLKTIRNCFL 710 (717)
Q Consensus 672 ~~~~~l~~li~~cl~~~p~~Rps~~eil~~l~~i~~~~~ 710 (717)
+||.+++.++.-||...|++||++++++.-|.+...+..
T Consensus 522 NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF~~qlt 560 (563)
T KOG1024|consen 522 NCPDELFTVMACCWALLPEERPSFSQLVICLSEFHTQLT 560 (563)
T ss_pred CCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHHHh
Confidence 789999999999999999999999999999988776553
No 379
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=99.97 E-value=1.3e-32 Score=289.61 Aligned_cols=256 Identities=25% Similarity=0.432 Sum_probs=204.9
Q ss_pred ccccccccCcccccceEEEEe-CCCc----hhhhHHhHhh-hhhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCc
Q 005045 390 NFSKENLIGTGSFGSVYKGTL-GDGT----IVAIKVLKLQ-QQGALKSFIDECNALKSTRHRNILRVITACSSVDLEGND 463 (717)
Q Consensus 390 ~y~~~~~ig~g~~g~v~~~~~-~~~~----~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~ 463 (717)
..+..++||+|+||+||+|.+ +.|+ +||+|++... ..+.-..+.+|+-+|.+++|||+++++++|-..
T Consensus 697 elkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s------ 770 (1177)
T KOG1025|consen 697 ELKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLS------ 770 (1177)
T ss_pred hhhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccc------
Confidence 345578899999999999984 4455 4777777644 344567889999999999999999999997432
Q ss_pred eEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEee
Q 005045 464 FKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGD 543 (717)
Q Consensus 464 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~D 543 (717)
...||++|+|+|+|.||++.++ ..+.....+.|..|||+||.|||.+ .+|||||.++||+|..-..+||.|
T Consensus 771 ~~qlvtq~mP~G~LlDyvr~hr------~~igsq~lLnw~~QIAkgM~YLe~q---rlVHrdLaaRNVLVksP~hvkitd 841 (1177)
T KOG1025|consen 771 TLQLVTQLMPLGCLLDYVREHR------DNIGSQDLLNWCYQIAKGMKYLEEQ---RLVHRDLAARNVLVKSPNHVKITD 841 (1177)
T ss_pred hHHHHHHhcccchHHHHHHHhh------ccccHHHHHHHHHHHHHHHHHHHhc---chhhhhhhhhheeecCCCeEEEEe
Confidence 3789999999999999998765 6788899999999999999999998 999999999999999999999999
Q ss_pred eccchhcccccCCCCCCcceeecccccccccCCCccC-CCCCcccchhhHHHHHHHHHh-CCCCCCCCCCCchhhhHHHH
Q 005045 544 FGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMN-GQVSILGDIYSYGILLLEMFT-GKRPTGDMFKDDFSIHMFVS 621 (717)
Q Consensus 544 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~ 621 (717)
||+++...... .........-.+.|+|=|.+. +.++.++|||||||++||++| |..|+++...+++
T Consensus 842 fgla~ll~~d~-----~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI------- 909 (1177)
T KOG1025|consen 842 FGLAKLLAPDE-----KEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEI------- 909 (1177)
T ss_pred cchhhccCccc-----ccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHh-------
Confidence 99998763221 112222334566788888854 569999999999999999999 9999988754432
Q ss_pred hcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHHH
Q 005045 622 MALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVNN 701 (717)
Q Consensus 622 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~~ 701 (717)
.+.+..... ...++-|...++.++.+||..|++.||+++++.+.
T Consensus 910 -------~dlle~geR-----------------------------LsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~ 953 (1177)
T KOG1025|consen 910 -------PDLLEKGER-----------------------------LSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEE 953 (1177)
T ss_pred -------hHHHhcccc-----------------------------CCCCCCccHHHHHHHHHHhccCcccCccHHHHHHH
Confidence 222221111 12556778889999999999999999999999999
Q ss_pred HHHHHHH
Q 005045 702 LKTIRNC 708 (717)
Q Consensus 702 l~~i~~~ 708 (717)
+.+....
T Consensus 954 fs~~ard 960 (1177)
T KOG1025|consen 954 FSRMARD 960 (1177)
T ss_pred HHHHhcC
Confidence 8877643
No 380
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.97 E-value=1.9e-31 Score=284.46 Aligned_cols=266 Identities=23% Similarity=0.337 Sum_probs=218.9
Q ss_pred CCCcccccccccccccccccCcccccceEEEEe-CCCchhhhHHhHhhhhhHHHHHHHHHHHHhcC-CCCceeEEEEeec
Q 005045 378 GMSYSDISKSTDNFSKENLIGTGSFGSVYKGTL-GDGTIVAIKVLKLQQQGALKSFIDECNALKST-RHRNILRVITACS 455 (717)
Q Consensus 378 ~~s~~~~~~~~~~y~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~ 455 (717)
...++.....++.|++++.||.|.+|.||+++. ++++.+|+|+....... ....+.|.++++.. .|||++.+++++.
T Consensus 8 ~~~~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~-deEiE~eynil~~~~~hpnv~~fyg~~~ 86 (953)
T KOG0587|consen 8 DIDLSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDE-EEEIELEYNMLKKYSHHPNVATFYGAFI 86 (953)
T ss_pred ccchhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCccc-cHHHHHHHHHHHhccCCCCcceEEEEEE
Confidence 455677788899999999999999999999994 48999999998766433 36677889999887 8999999999988
Q ss_pred cccCCCCceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCC
Q 005045 456 SVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDK 535 (717)
Q Consensus 456 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~ 535 (717)
...-..++.+|+|||||.|||..|+++.... .++.|..+..|++.++.|+.+||.+ .++|||||-.||+++.
T Consensus 87 k~~~~~~DqLWLVMEfC~gGSVTDLVKn~~g-----~rl~E~~IaYI~re~lrgl~HLH~n---kviHRDikG~NiLLT~ 158 (953)
T KOG0587|consen 87 KKDPGNGDQLWLVMEFCGGGSVTDLVKNTKG-----NRLKEEWIAYILREILRGLAHLHNN---KVIHRDIKGQNVLLTE 158 (953)
T ss_pred EecCCCCCeEEEEeeccCCccHHHHHhhhcc-----cchhhHHHHHHHHHHHHHHHHHhhc---ceeeecccCceEEEec
Confidence 7777788899999999999999999986642 7899999999999999999999998 8999999999999999
Q ss_pred CCceEEeeeccchhcccccCCCCCCcceeecccccccccCCCccCC------CCCcccchhhHHHHHHHHHhCCCCCCCC
Q 005045 536 DMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG------QVSILGDIYSYGILLLEMFTGKRPTGDM 609 (717)
Q Consensus 536 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~------~~~~~sDvwslG~vl~elltg~~p~~~~ 609 (717)
+|.||++|||.+..+ ..........+||+.|||||++.. -|+..+|+||||++.-||--|.+|+.++
T Consensus 159 e~~VKLvDFGvSaQl-------dsT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~Dm 231 (953)
T KOG0587|consen 159 NAEVKLVDFGVSAQL-------DSTVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDM 231 (953)
T ss_pred cCcEEEeeeeeeeee-------ecccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCc
Confidence 999999999999876 334455567889999999999643 2678899999999999999999999876
Q ss_pred CCCchhhhHHHHhcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCc
Q 005045 610 FKDDFSIHMFVSMALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSP 689 (717)
Q Consensus 610 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p 689 (717)
.+--. ...+|.. +.. ....+..-.++|.+||..|+..|-
T Consensus 232 HPmra------LF~IpRN---------PPP--------------------------kLkrp~kWs~~FndFIs~cL~Kd~ 270 (953)
T KOG0587|consen 232 HPMRA------LFLIPRN---------PPP--------------------------KLKRPKKWSKKFNDFISTCLVKDY 270 (953)
T ss_pred chhhh------hccCCCC---------CCc--------------------------cccchhhHHHHHHHHHHHHHhhcc
Confidence 44311 1111111 100 011223337788999999999999
Q ss_pred CCCCCHHHHHH
Q 005045 690 RERIAMNVVVN 700 (717)
Q Consensus 690 ~~Rps~~eil~ 700 (717)
+.||++.++++
T Consensus 271 e~RP~~~~ll~ 281 (953)
T KOG0587|consen 271 EQRPSTEELLK 281 (953)
T ss_pred ccCcchhhhcc
Confidence 99999999884
No 381
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.97 E-value=1.4e-31 Score=233.22 Aligned_cols=204 Identities=27% Similarity=0.443 Sum_probs=172.3
Q ss_pred cccccccccCcccccceEEEE-eCCCchhhhHHhHhhh--hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceE
Q 005045 389 DNFSKENLIGTGSFGSVYKGT-LGDGTIVAIKVLKLQQ--QGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFK 465 (717)
Q Consensus 389 ~~y~~~~~ig~g~~g~v~~~~-~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~ 465 (717)
.+|...++||+|.+|+||+|+ +.+++.||+|.+..++ .+......+|+-+++.++|.||+++++. ...++..
T Consensus 2 ~~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dv-----lhsdkkl 76 (292)
T KOG0662|consen 2 QKYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV-----LHSDKKL 76 (292)
T ss_pred cchHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhh-----hccCcee
Confidence 367888999999999999999 4589999999988653 4456778899999999999999999998 5566789
Q ss_pred EEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeec
Q 005045 466 ALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFG 545 (717)
Q Consensus 466 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg 545 (717)
.+|+||| ..+|..|..... +.++.+.++.++.|+++|+.++|++ .+.|||+||+|.+|+.+|++|++|||
T Consensus 77 tlvfe~c-dqdlkkyfdsln------g~~d~~~~rsfmlqllrgl~fchsh---nvlhrdlkpqnllin~ngelkladfg 146 (292)
T KOG0662|consen 77 TLVFEFC-DQDLKKYFDSLN------GDLDPEIVRSFMLQLLRGLGFCHSH---NVLHRDLKPQNLLINRNGELKLADFG 146 (292)
T ss_pred EEeHHHh-hHHHHHHHHhcC------CcCCHHHHHHHHHHHHhhhhhhhhh---hhhhccCCcceEEeccCCcEEecccc
Confidence 9999999 468888876543 6789999999999999999999998 99999999999999999999999999
Q ss_pred cchhcccccCCCCCCcceeecccccccccCCCccCCC--CCcccchhhHHHHHHHHHh-CCCCCCCCCCCch
Q 005045 546 LAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNGQ--VSILGDIYSYGILLLEMFT-GKRPTGDMFKDDF 614 (717)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~ 614 (717)
+++-+ ..+........-|..|++|.++-|. |+...|+||-||++.|+-. |.+.|.+.+.++.
T Consensus 147 laraf-------gipvrcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddq 211 (292)
T KOG0662|consen 147 LARAF-------GIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQ 211 (292)
T ss_pred hhhhc-------CCceEeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHH
Confidence 99865 2223333445578899999996653 7899999999999999998 7777777655444
No 382
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.4e-31 Score=278.10 Aligned_cols=239 Identities=23% Similarity=0.282 Sum_probs=188.6
Q ss_pred cccccccccccCcccccceEEEEeC-CCchhhhHHhHhhhhhHHHHHHHHHHHHhcC-CCCceeEEEEeeccccCCCCce
Q 005045 387 STDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQQGALKSFIDECNALKST-RHRNILRVITACSSVDLEGNDF 464 (717)
Q Consensus 387 ~~~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~~~~~~~~ 464 (717)
.+..|.....+|.|+|+.|-.+... +++.+++|++.... ....+|+.++... .||||+++.+. +.+..+
T Consensus 320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~----~~~~~e~~~~~~~~~h~niv~~~~v-----~~~~~~ 390 (612)
T KOG0603|consen 320 FTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA----DDNQDEIPISLLVRDHPNIVKSHDV-----YEDGKE 390 (612)
T ss_pred cchhhccccccCCCCccceeeeeccccccchhheeccccc----cccccccchhhhhcCCCcceeecce-----ecCCce
Confidence 3678999999999999999999854 88999999987552 2334577666665 89999999999 566779
Q ss_pred EEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEe-CCCCceEEee
Q 005045 465 KALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLL-DKDMTAHVGD 543 (717)
Q Consensus 465 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll-~~~~~~kl~D 543 (717)
.|+|||.+.|+-+.+.+... +... ..+..|+++|+.|+.|||++ |+||||+||+||++ +..|+++|+|
T Consensus 391 ~~~v~e~l~g~ell~ri~~~-------~~~~-~e~~~w~~~lv~Av~~LH~~---gvvhRDLkp~NIL~~~~~g~lrlty 459 (612)
T KOG0603|consen 391 IYLVMELLDGGELLRRIRSK-------PEFC-SEASQWAAELVSAVDYLHEQ---GVVHRDLKPGNILLDGSAGHLRLTY 459 (612)
T ss_pred eeeeehhccccHHHHHHHhc-------chhH-HHHHHHHHHHHHHHHHHHhc---CeeecCCChhheeecCCCCcEEEEE
Confidence 99999999998877776543 2233 77889999999999999997 99999999999999 5899999999
Q ss_pred eccchhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHHHh
Q 005045 544 FGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVSM 622 (717)
Q Consensus 544 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~ 622 (717)
||.++..... ..+.+-|..|+|||+... .+++++||||||+++|+|++|..||.....+ ..+...+
T Consensus 460 FG~a~~~~~~----------~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~-~ei~~~i-- 526 (612)
T KOG0603|consen 460 FGFWSELERS----------CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG-IEIHTRI-- 526 (612)
T ss_pred echhhhCchh----------hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch-HHHHHhh--
Confidence 9999865111 234456889999999665 5999999999999999999999999876444 1111100
Q ss_pred cCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHH
Q 005045 623 ALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVN 700 (717)
Q Consensus 623 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~ 700 (717)
..+.. .+..+....+|+.+||+.+|.+||+|.|+..
T Consensus 527 ---------~~~~~---------------------------------s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~ 562 (612)
T KOG0603|consen 527 ---------QMPKF---------------------------------SECVSDEAKDLLQQLLQVDPALRLGADEIGA 562 (612)
T ss_pred ---------cCCcc---------------------------------ccccCHHHHHHHHHhccCChhhCcChhhhcc
Confidence 00000 0222566789999999999999999999875
No 383
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.97 E-value=3.5e-31 Score=300.33 Aligned_cols=146 Identities=30% Similarity=0.474 Sum_probs=129.2
Q ss_pred ccccccccccCcccccceEEEEeC-CCchhhhHHhHhhh---hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCc
Q 005045 388 TDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQ---QGALKSFIDECNALKSTRHRNILRVITACSSVDLEGND 463 (717)
Q Consensus 388 ~~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~ 463 (717)
.++|++.++||+|+||.||+|.+. +++.||+|++.... ......+..|+.+++.++|+||+++++.+ ....
T Consensus 3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~-----~~~~ 77 (669)
T cd05610 3 IEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSL-----QSAN 77 (669)
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEE-----EECC
Confidence 468999999999999999999965 78999999986432 33456788999999999999999999884 3445
Q ss_pred eEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEee
Q 005045 464 FKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGD 543 (717)
Q Consensus 464 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~D 543 (717)
..|+||||+++++|.+++... ..+++..++.++.||+.||+|||.. +|+||||||+|||++.++.+||+|
T Consensus 78 ~~~lVmEy~~g~~L~~li~~~-------~~l~~~~~~~i~~qil~aL~yLH~~---gIiHrDLKP~NILl~~~g~vkL~D 147 (669)
T cd05610 78 NVYLVMEYLIGGDVKSLLHIY-------GYFDEEMAVKYISEVALALDYLHRH---GIIHRDLKPDNMLISNEGHIKLTD 147 (669)
T ss_pred EEEEEEeCCCCCCHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCccHHHEEEcCCCCEEEEe
Confidence 899999999999999998754 4578899999999999999999997 999999999999999999999999
Q ss_pred eccch
Q 005045 544 FGLAK 548 (717)
Q Consensus 544 fg~~~ 548 (717)
||+++
T Consensus 148 FGls~ 152 (669)
T cd05610 148 FGLSK 152 (669)
T ss_pred CCCCc
Confidence 99886
No 384
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=99.97 E-value=3e-31 Score=272.35 Aligned_cols=265 Identities=26% Similarity=0.365 Sum_probs=193.9
Q ss_pred cccccccCcccccceEEEEeC-CCchhhhHHhHhhh--hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceEEE
Q 005045 391 FSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQ--QGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFKAL 467 (717)
Q Consensus 391 y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~l 467 (717)
|++.+.||+|++|.||.|+.. +++.||+|.+.... ......+..|+.++++++|+|++++++.+ ...+..++
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~-----~~~~~~~~ 75 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVI-----HTERKLYL 75 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhh-----hcCCceEE
Confidence 677889999999999999965 69999999987653 33346778899999999999999999985 34468999
Q ss_pred EEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeeccc
Q 005045 468 VFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLA 547 (717)
Q Consensus 468 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~ 547 (717)
||||++ ++|.+++.... ..+++..+..++.|++.|++|||+. +++||||+|+||+++.++.++|+|||.+
T Consensus 76 v~e~~~-~~l~~~i~~~~------~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~~l~~~ni~~~~~~~~~l~d~g~~ 145 (282)
T cd07829 76 VFEYCD-MDLKKYLDKRP------GPLSPNLIKSIMYQLLRGLAYCHSH---RILHRDLKPQNILINRDGVLKLADFGLA 145 (282)
T ss_pred EecCcC-cCHHHHHHhhc------cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChheEEEcCCCCEEEecCCcc
Confidence 999996 69999997542 3689999999999999999999998 9999999999999999999999999998
Q ss_pred hhcccccCCCCCCcceeecccccccccCCCccCC--CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHH---Hh
Q 005045 548 KFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG--QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFV---SM 622 (717)
Q Consensus 548 ~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~---~~ 622 (717)
....... .......++..|+|||.+.+ .++.++|||||||++||+++|..||......+. ..... ..
T Consensus 146 ~~~~~~~-------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~-~~~~~~~~~~ 217 (282)
T cd07829 146 RAFGIPL-------RTYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQ-LFKIFQILGT 217 (282)
T ss_pred cccCCCc-------cccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHH-HHHHHHHhCC
Confidence 7652111 01122345678999999643 578999999999999999999999966432111 10000 00
Q ss_pred cCChhhhhhcC-----CCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHH
Q 005045 623 ALPDHVMDILD-----PSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNV 697 (717)
Q Consensus 623 ~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~e 697 (717)
..+..+..+.+ ...+..... . . ....+..+..+.+++.+||+.+|++||++.+
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~---~-------------~------~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ 275 (282)
T cd07829 218 PTEESWPGVTKLPDYKPTFPKFPPK---D-------------L------EKVLPRLDPEGIDLLSKMLQYNPAKRISAKE 275 (282)
T ss_pred CcHHHHHhhcccccccccccccCcc---c-------------h------HHhcccccHHHHHHHHHhhccCcccCCCHHH
Confidence 00111111111 000000000 0 0 0011122557899999999999999999999
Q ss_pred HHH
Q 005045 698 VVN 700 (717)
Q Consensus 698 il~ 700 (717)
++.
T Consensus 276 ~l~ 278 (282)
T cd07829 276 ALK 278 (282)
T ss_pred Hhh
Confidence 975
No 385
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=99.97 E-value=2.8e-31 Score=269.04 Aligned_cols=249 Identities=23% Similarity=0.270 Sum_probs=185.4
Q ss_pred ccccccccCcccccceEEEEeC-CCchhhhHHhHhh-----hhhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCc
Q 005045 390 NFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQ-----QQGALKSFIDECNALKSTRHRNILRVITACSSVDLEGND 463 (717)
Q Consensus 390 ~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~-----~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~ 463 (717)
+|.+.++||+|++|.||++.+. .+..+++|+++.. .......+..|+.+++.++||||+++++.+ .+..
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~ 75 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASF-----LERD 75 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHH-----hcCC
Confidence 5889999999999999999864 3444555554421 122234566789999999999999999884 3445
Q ss_pred eEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEee
Q 005045 464 FKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGD 543 (717)
Q Consensus 464 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~D 543 (717)
..++||||+++++|.+++..... ....+++..++.++.|++.|++|||+. +++|+||+|+||+++. +.++|+|
T Consensus 76 ~~~lv~e~~~~~~l~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~~l~~~nili~~-~~~~l~d 148 (260)
T cd08222 76 AFCIITEYCEGRDLDCKLEELKH---TGKTLSENQVCEWFIQLLLGVHYMHQR---RILHRDLKAKNIFLKN-NLLKIGD 148 (260)
T ss_pred ceEEEEEeCCCCCHHHHHHHHhh---cccccCHHHHHHHHHHHHHHHHHHHHc---CccccCCChhheEeec-CCEeecc
Confidence 78999999999999988864211 115689999999999999999999997 9999999999999975 5799999
Q ss_pred eccchhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHHHh
Q 005045 544 FGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVSM 622 (717)
Q Consensus 544 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~ 622 (717)
||.+....... .......++..|+|||...+ .++.++|+||||+++|+|++|..||...... ....
T Consensus 149 ~g~~~~~~~~~-------~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~-----~~~~- 215 (260)
T cd08222 149 FGVSRLLMGSC-------DLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFL-----SVVL- 215 (260)
T ss_pred cCceeecCCCc-------ccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHH-----HHHH-
Confidence 99987652211 11223457888999999654 4788999999999999999999998542110 0000
Q ss_pred cCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHH
Q 005045 623 ALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVN 700 (717)
Q Consensus 623 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~ 700 (717)
.......+. .+..++..+.+++.+|++.+|++||++.|+++
T Consensus 216 -------~~~~~~~~~------------------------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 256 (260)
T cd08222 216 -------RIVEGPTPS------------------------------LPETYSRQLNSIMQSMLNKDPSLRPSAAEILR 256 (260)
T ss_pred -------HHHcCCCCC------------------------------CcchhcHHHHHHHHHHhcCChhhCcCHHHHhh
Confidence 000000000 11223567788999999999999999999986
No 386
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=5e-31 Score=263.61 Aligned_cols=155 Identities=28% Similarity=0.430 Sum_probs=127.1
Q ss_pred CCcccccCCCCccccccc--ccccccccccCcccccceEEEEe-CCCchhhhHHhHhhhhhHHHHHHHHHHHHhcCC---
Q 005045 370 IPKEVRQSGMSYSDISKS--TDNFSKENLIGTGSFGSVYKGTL-GDGTIVAIKVLKLQQQGALKSFIDECNALKSTR--- 443 (717)
Q Consensus 370 ~p~~~~~~~~s~~~~~~~--~~~y~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~--- 443 (717)
-|+..++.+|-.-.+-.. .++|.+.+++|.|-|++||+|.+ +..+.||+|+.+... ...+....||++|++++
T Consensus 57 ~~~dY~kGGYHpV~IGD~F~~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAq-hYtEaAlDEIklL~~v~~~D 135 (590)
T KOG1290|consen 57 DPEDYRKGGYHPVRIGDVFNGGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQ-HYTEAALDEIKLLQQVREGD 135 (590)
T ss_pred ChhhhhcCCCceeeccccccCceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhh-HHHHHHHHHHHHHHHHHhcC
Confidence 344555665554444443 36999999999999999999995 478899999987553 23467788999999982
Q ss_pred --C---CceeEEEEeeccccCCCCceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCC
Q 005045 444 --H---RNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCD 518 (717)
Q Consensus 444 --h---~ni~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~ 518 (717)
| ..||++++.+... ...+.++|+|+|++ |.+|..+|... .++.++...+++|++||+.||+|||..|
T Consensus 136 p~~~~~~~VV~LlD~Fkhs-GpNG~HVCMVfEvL-GdnLLklI~~s-----~YrGlpl~~VK~I~~qvL~GLdYLH~ec- 207 (590)
T KOG1290|consen 136 PNDPGKKCVVQLLDHFKHS-GPNGQHVCMVFEVL-GDNLLKLIKYS-----NYRGLPLSCVKEICRQVLTGLDYLHREC- 207 (590)
T ss_pred CCCCCCceeeeeeccceec-CCCCcEEEEEehhh-hhHHHHHHHHh-----CCCCCcHHHHHHHHHHHHHHHHHHHHhc-
Confidence 2 3599999997766 47788999999999 88999998865 3478999999999999999999999997
Q ss_pred CCeeecCCCCCCEEeC
Q 005045 519 TPIAHCDLKPSNVLLD 534 (717)
Q Consensus 519 ~~ivH~dlkp~NIll~ 534 (717)
||+|.||||+||++.
T Consensus 208 -gIIHTDlKPENvLl~ 222 (590)
T KOG1290|consen 208 -GIIHTDLKPENVLLC 222 (590)
T ss_pred -CccccCCCcceeeee
Confidence 999999999999993
No 387
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.97 E-value=1.4e-31 Score=242.26 Aligned_cols=278 Identities=22% Similarity=0.315 Sum_probs=198.8
Q ss_pred cccccccccccCcccccceEEEE-eCCCchhhhHHhHhhhhhHHHHHHHHHHHHhcCC-CCceeEEEEeeccccCCCCce
Q 005045 387 STDNFSKENLIGTGSFGSVYKGT-LGDGTIVAIKVLKLQQQGALKSFIDECNALKSTR-HRNILRVITACSSVDLEGNDF 464 (717)
Q Consensus 387 ~~~~y~~~~~ig~g~~g~v~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~ni~~~~~~~~~~~~~~~~~ 464 (717)
..++|++.+++|+|.++.||.|. ..+.+++++|++++.. .+.+.+|+++++.+. ||||+++++...++. ...
T Consensus 36 ~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVk---kkKIkREikIL~nL~gg~NIi~L~DiV~Dp~---Skt 109 (338)
T KOG0668|consen 36 NQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVK---KKKIKREIKILQNLRGGPNIIKLLDIVKDPE---SKT 109 (338)
T ss_pred ccchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHH---HHHHHHHHHHHHhccCCCCeeehhhhhcCcc---ccC
Confidence 56799999999999999999999 5578899999998654 356778999999995 999999999976543 556
Q ss_pred EEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCC-CceEEee
Q 005045 465 KALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKD-MTAHVGD 543 (717)
Q Consensus 465 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~-~~~kl~D 543 (717)
..+||||+.+.++.... +.++...++..+.++++||+|||+. ||.|||+||.|+||+.. -.++|+|
T Consensus 110 paLiFE~v~n~Dfk~ly----------~tl~d~dIryY~~elLkALdyCHS~---GImHRDVKPhNvmIdh~~rkLrlID 176 (338)
T KOG0668|consen 110 PSLIFEYVNNTDFKQLY----------PTLTDYDIRYYIYELLKALDYCHSM---GIMHRDVKPHNVMIDHELRKLRLID 176 (338)
T ss_pred chhHhhhhccccHHHHh----------hhhchhhHHHHHHHHHHHHhHHHhc---CcccccCCcceeeechhhceeeeee
Confidence 78999999887777655 5677888999999999999999998 99999999999999965 4899999
Q ss_pred eccchhcccccCCCCCCcceeecccccccccCCCccCC--CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHHH
Q 005045 544 FGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG--QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVS 621 (717)
Q Consensus 544 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~ 621 (717)
+|+|.++. +...... ...+..|.-||.+-. .++++-|+|||||++..|+..+.||....+....+...+.
T Consensus 177 WGLAEFYH-----p~~eYnV---RVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIak 248 (338)
T KOG0668|consen 177 WGLAEFYH-----PGKEYNV---RVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAK 248 (338)
T ss_pred cchHhhcC-----CCceeee---eeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHH
Confidence 99999872 2222222 235567889999543 4899999999999999999999998665444444443333
Q ss_pred hcCChhhhhhcCC-CCCCCCCCcHHHH--HHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHH
Q 005045 622 MALPDHVMDILDP-SMPLDEENDEEQI--EEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVV 698 (717)
Q Consensus 622 ~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ei 698 (717)
..--+.+...+.+ .+..++. +..+ ....+.....++.+..... ..+..+++.+.+.+|-.+|+||+|.
T Consensus 249 VLGt~el~~Yl~KY~i~Ldp~--~~~i~~~~~rk~w~~Fi~~~n~hl~-------~peaiDlldklLrYDHqeRlTakEa 319 (338)
T KOG0668|consen 249 VLGTDELYAYLNKYQIDLDPQ--FEDILGRHSRKPWSRFINSENQHLV-------SPEAIDLLDKLLRYDHQERLTAKEA 319 (338)
T ss_pred HhChHHHHHHHHHHccCCChh--HhhHhhccccccHHHhCCccccccC-------ChHHHHHHHHHHhhccccccchHHH
Confidence 2222222222111 1111110 0000 0000111111122211111 3456789999999999999999998
Q ss_pred HH
Q 005045 699 VN 700 (717)
Q Consensus 699 l~ 700 (717)
.+
T Consensus 320 m~ 321 (338)
T KOG0668|consen 320 MA 321 (338)
T ss_pred hc
Confidence 74
No 388
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=99.97 E-value=8.4e-31 Score=263.87 Aligned_cols=235 Identities=30% Similarity=0.363 Sum_probs=185.2
Q ss_pred cCcccccceEEEEeC-CCchhhhHHhHhhh---hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceEEEEEecC
Q 005045 397 IGTGSFGSVYKGTLG-DGTIVAIKVLKLQQ---QGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFKALVFEFM 472 (717)
Q Consensus 397 ig~g~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~lv~e~~ 472 (717)
||.|++|.||.+... +++.+++|.+.... ......+..|++++++++|+||+++++. ++.+...++||||+
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~-----~~~~~~~~~v~e~~ 75 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYA-----FQTEEKLYLVLEYA 75 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHH-----eecCCeeEEEEecC
Confidence 689999999999965 68899999876442 2245678899999999999999999988 44566899999999
Q ss_pred CCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeeccchhccc
Q 005045 473 SNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFE 552 (717)
Q Consensus 473 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 552 (717)
++++|.+++... ..+++..+..++.|++.|+.|+|+. +++|+||+|+||+++.++.++|+|||.+.....
T Consensus 76 ~~~~L~~~l~~~-------~~l~~~~~~~~~~qi~~~l~~lh~~---~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~ 145 (250)
T cd05123 76 PGGELFSHLSKE-------GRFSEERARFYAAEIVLALEYLHSL---GIIYRDLKPENILLDADGHIKLTDFGLAKELSS 145 (250)
T ss_pred CCCcHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcceEEEcCCCcEEEeecCcceeccc
Confidence 999999999754 4589999999999999999999997 999999999999999999999999999876521
Q ss_pred ccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHHHhcCChhhhhh
Q 005045 553 ISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVSMALPDHVMDI 631 (717)
Q Consensus 553 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 631 (717)
.. .......++..|+|||...+ .++.++|+||||+++|++++|..||...... .. ...+
T Consensus 146 ~~-------~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~--~~-----------~~~~ 205 (250)
T cd05123 146 EG-------SRTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRK--EI-----------YEKI 205 (250)
T ss_pred CC-------CcccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH--HH-----------HHHH
Confidence 11 11233457889999999655 4788999999999999999999999654221 00 0011
Q ss_pred cCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHH
Q 005045 632 LDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNV 697 (717)
Q Consensus 632 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~e 697 (717)
...... .+...+..+.+++.+||..+|++|||+++
T Consensus 206 ~~~~~~-------------------------------~~~~~~~~l~~~i~~~l~~~p~~R~~~~~ 240 (250)
T cd05123 206 LKDPLR-------------------------------FPEFLSPEARDLISGLLQKDPTKRLGSGG 240 (250)
T ss_pred hcCCCC-------------------------------CCCCCCHHHHHHHHHHhcCCHhhCCCccc
Confidence 111111 11111556788999999999999999954
No 389
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.9e-31 Score=267.12 Aligned_cols=202 Identities=25% Similarity=0.348 Sum_probs=176.1
Q ss_pred ccccccccccccCcccccceEEEEeCC-CchhhhHHhHhh---hhhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCC
Q 005045 386 KSTDNFSKENLIGTGSFGSVYKGTLGD-GTIVAIKVLKLQ---QQGALKSFIDECNALKSTRHRNILRVITACSSVDLEG 461 (717)
Q Consensus 386 ~~~~~y~~~~~ig~g~~g~v~~~~~~~-~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~ 461 (717)
....+..++..+|.||||.|-+++.++ ...+|+|+++.. +....+....|..+|.+++.|.|+++|.. +.+
T Consensus 417 v~l~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrT-----frd 491 (732)
T KOG0614|consen 417 VKLSDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRT-----FRD 491 (732)
T ss_pred cchhhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHH-----hcc
Confidence 345677888999999999999999653 345999999754 34556788899999999999999999998 566
Q ss_pred CceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEE
Q 005045 462 NDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHV 541 (717)
Q Consensus 462 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl 541 (717)
.+..|++||-|-||.++..++.+ +.++...++.++..+++|++|||+. +||.|||||+|.+++.+|-+||
T Consensus 492 ~kyvYmLmEaClGGElWTiLrdR-------g~Fdd~tarF~~acv~EAfeYLH~k---~iIYRDLKPENllLd~~Gy~KL 561 (732)
T KOG0614|consen 492 SKYVYMLMEACLGGELWTILRDR-------GSFDDYTARFYVACVLEAFEYLHRK---GIIYRDLKPENLLLDNRGYLKL 561 (732)
T ss_pred chhhhhhHHhhcCchhhhhhhhc-------CCcccchhhhhHHHHHHHHHHHHhc---CceeccCChhheeeccCCceEE
Confidence 77999999999999999999866 6789999999999999999999997 9999999999999999999999
Q ss_pred eeeccchhcccccCCCCCCcceeecccccccccCCCc-cCCCCCcccchhhHHHHHHHHHhCCCCCCCCC
Q 005045 542 GDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEH-MNGQVSILGDIYSYGILLLEMFTGKRPTGDMF 610 (717)
Q Consensus 542 ~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~sDvwslG~vl~elltg~~p~~~~~ 610 (717)
.|||.|+.+. .....-+++||+.|.|||+ +....+.++|.||||+++|||++|.+||.+.+
T Consensus 562 VDFGFAKki~--------~g~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~d 623 (732)
T KOG0614|consen 562 VDFGFAKKIG--------SGRKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVD 623 (732)
T ss_pred eehhhHHHhc--------cCCceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCc
Confidence 9999999872 2223345889999999999 55668999999999999999999999998753
No 390
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=99.97 E-value=4e-33 Score=257.85 Aligned_cols=257 Identities=25% Similarity=0.324 Sum_probs=191.4
Q ss_pred cccccccccCcccccceEEEEeC-CCchhhhHHhHhhh-hhHHHHHHHHHHHHhc-CCCCceeEEEEeeccccCCCCceE
Q 005045 389 DNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQ-QGALKSFIDECNALKS-TRHRNILRVITACSSVDLEGNDFK 465 (717)
Q Consensus 389 ~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~-l~h~ni~~~~~~~~~~~~~~~~~~ 465 (717)
.+.+.+..||.|+||+|++-.++ +|+..|||.+.... ....+++..|.+...+ -+.|+||++|+.++. .+..
T Consensus 64 ~~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~-----EGdc 138 (361)
T KOG1006|consen 64 DNLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFS-----EGDC 138 (361)
T ss_pred chHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhc-----CCce
Confidence 34456778999999999998865 89999999997654 3556788888886554 489999999999643 3478
Q ss_pred EEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeec
Q 005045 466 ALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFG 545 (717)
Q Consensus 466 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg 545 (717)
|+.||.| ..+++-+.+.-- ..+...+++.-.-+|....+.||+||-... .|+|||+||+||+++..|.+||+|||
T Consensus 139 WiCMELM-d~SlDklYk~vy--~vq~~~ipE~Ilg~ItvatV~AL~yLK~~l--kiIHRDvKPSNILldr~G~vKLCDFG 213 (361)
T KOG1006|consen 139 WICMELM-DISLDKLYKRVY--SVQKSRIPENILGHITVATVDALDYLKEEL--KIIHRDVKPSNILLDRHGDVKLCDFG 213 (361)
T ss_pred eeeHHHH-hhhHHHHHHHHH--HHHhccCcHhhhhheeeeehhHHHHHHHHh--hhhhccCChhheEEecCCCEeeeccc
Confidence 9999999 467765432110 002257899888899999999999999874 89999999999999999999999999
Q ss_pred cchhcccccCCCCCCcceeecccccccccCCCccC--C-CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHHHh
Q 005045 546 LAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMN--G-QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVSM 622 (717)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~--~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~ 622 (717)
.+-.+.+ ....+.-+|..+|||||-+. + .|+-+|||||||+++||+-||..||..+..--..+...+..
T Consensus 214 IcGqLv~--------SiAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv~g 285 (361)
T KOG1006|consen 214 ICGQLVD--------SIAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQVVIG 285 (361)
T ss_pred chHhHHH--------HHHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHHHcC
Confidence 9987622 22223346888999999964 3 38999999999999999999999998764311111111111
Q ss_pred cCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHH
Q 005045 623 ALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVN 700 (717)
Q Consensus 623 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~ 700 (717)
..|. +..+. ..-++...+.+++--|+..|-.+||...++..
T Consensus 286 dpp~---------l~~~~----------------------------~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~ 326 (361)
T KOG1006|consen 286 DPPI---------LLFDK----------------------------ECVHYSFSMVRFINTCLIKDRSDRPKYDDLKK 326 (361)
T ss_pred CCCe---------ecCcc----------------------------cccccCHHHHHHHHHHhhcccccCcchhhhhc
Confidence 1110 10000 11223567889999999999999999999875
No 391
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.97 E-value=1.8e-30 Score=289.74 Aligned_cols=268 Identities=26% Similarity=0.426 Sum_probs=206.9
Q ss_pred ccccccccccccccCcccccceEEEEeC----C----CchhhhHHhHhh-hhhHHHHHHHHHHHHhcC-CCCceeEEEEe
Q 005045 384 ISKSTDNFSKENLIGTGSFGSVYKGTLG----D----GTIVAIKVLKLQ-QQGALKSFIDECNALKST-RHRNILRVITA 453 (717)
Q Consensus 384 ~~~~~~~y~~~~~ig~g~~g~v~~~~~~----~----~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l-~h~ni~~~~~~ 453 (717)
+.....+..+.+.+|+|+||.||+|... . ...||||..+.. .....+.+..|+++++.+ .|+||+.++++
T Consensus 291 ~e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~ 370 (609)
T KOG0200|consen 291 WEIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGA 370 (609)
T ss_pred eeechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheee
Confidence 4444555567779999999999999832 1 446899998744 235678899999999999 69999999999
Q ss_pred eccccCCCCceEEEEEecCCCCChhhhccCCC-CCcccc--------cccCHHHHHHHHHHHHHHHHHHHhcCCCCeeec
Q 005045 454 CSSVDLEGNDFKALVFEFMSNGNLDQWLHPSP-AEHYQF--------KKLSVIQRLNIAIDVASALDYLHHHCDTPIAHC 524 (717)
Q Consensus 454 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~--------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~ 524 (717)
|.. .+..++|+||+..|+|.++++..+ ...... ..++..+...++.|||.|++||++. ++|||
T Consensus 371 ~t~-----~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~---~~vHR 442 (609)
T KOG0200|consen 371 CTQ-----DGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASV---PCVHR 442 (609)
T ss_pred ecc-----CCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhC---Cccch
Confidence 754 558999999999999999998765 111111 2389999999999999999999997 99999
Q ss_pred CCCCCCEEeCCCCceEEeeeccchhcccccCCCCCCcceeeccc--ccccccCCCccCC-CCCcccchhhHHHHHHHHHh
Q 005045 525 DLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLK--GSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFT 601 (717)
Q Consensus 525 dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~--~~~~y~aPE~~~~-~~~~~sDvwslG~vl~ellt 601 (717)
|+.++||++..+..+||+|||+|+.... ........-. -+..|||||.+.. .++.+|||||||+++||++|
T Consensus 443 DLAaRNVLi~~~~~~kIaDFGlar~~~~------~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~Eifs 516 (609)
T KOG0200|consen 443 DLAARNVLITKNKVIKIADFGLARDHYN------KDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFT 516 (609)
T ss_pred hhhhhhEEecCCCEEEEccccceeccCC------CCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhh
Confidence 9999999999999999999999986421 1111112122 2445999999766 58999999999999999999
Q ss_pred -CCCCCCCCCCCchhhhHHHHhcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHH
Q 005045 602 -GKRPTGDMFKDDFSIHMFVSMALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRI 680 (717)
Q Consensus 602 -g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 680 (717)
|..||.+...... +.++... . .-.+.+..|..++.++
T Consensus 517 LG~~PYp~~~~~~~-l~~~l~~------------G-----------------------------~r~~~P~~c~~eiY~i 554 (609)
T KOG0200|consen 517 LGGTPYPGIPPTEE-LLEFLKE------------G-----------------------------NRMEQPEHCSDEIYDL 554 (609)
T ss_pred CCCCCCCCCCcHHH-HHHHHhc------------C-----------------------------CCCCCCCCCCHHHHHH
Confidence 9999976421111 1111111 1 1122556678889999
Q ss_pred hhccCCCCcCCCCCHHHHHHHHHHHHH
Q 005045 681 GLMCSTTSPRERIAMNVVVNNLKTIRN 707 (717)
Q Consensus 681 i~~cl~~~p~~Rps~~eil~~l~~i~~ 707 (717)
++.||+.+|++||++.|+.+.++....
T Consensus 555 M~~CW~~~p~~RP~F~~~~~~~~~~l~ 581 (609)
T KOG0200|consen 555 MKSCWNADPEDRPTFSECVEFFEKHLQ 581 (609)
T ss_pred HHHHhCCCcccCCCHHHHHHHHHHHHH
Confidence 999999999999999999999999643
No 392
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.97 E-value=1.9e-30 Score=258.77 Aligned_cols=179 Identities=21% Similarity=0.173 Sum_probs=147.6
Q ss_pred ccccceEEEEeC-CCchhhhHHhHhhhhhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceEEEEEecCCCCChh
Q 005045 400 GSFGSVYKGTLG-DGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLD 478 (717)
Q Consensus 400 g~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~ 478 (717)
|.+|.||+++++ +++.||+|.+.... .+..|...+....||||+++++.+ ...+..++||||+++++|.
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~-----~~~~~~~lv~e~~~~~~L~ 73 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYI-----VSEDSVFLVLQHAEGGKLW 73 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhhe-----ecCCeEEEEEecCCCCCHH
Confidence 889999999965 78999999987543 223445555566799999999984 4456899999999999999
Q ss_pred hhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeeccchhcccccCCCC
Q 005045 479 QWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPS 558 (717)
Q Consensus 479 ~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~ 558 (717)
+++... ..+++..+..++.|++.|++|||+. +++||||||+||+++.++.++++|||.+......
T Consensus 74 ~~l~~~-------~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~----- 138 (237)
T cd05576 74 SHISKF-------LNIPEECVKRWAAEMVVALDALHRE---GIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDS----- 138 (237)
T ss_pred HHHHHh-------cCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCCCEEEecccchhccccc-----
Confidence 998654 4589999999999999999999997 9999999999999999999999999987654111
Q ss_pred CCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHhCCCCCCC
Q 005045 559 KNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRPTGD 608 (717)
Q Consensus 559 ~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~elltg~~p~~~ 608 (717)
.....++..|+|||...+ .++.++||||+||++|+|++|..|+..
T Consensus 139 -----~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~ 184 (237)
T cd05576 139 -----CDGEAVENMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVEC 184 (237)
T ss_pred -----cccCCcCccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhc
Confidence 112335677999999754 478999999999999999999988743
No 393
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.97 E-value=1.5e-30 Score=232.08 Aligned_cols=219 Identities=23% Similarity=0.321 Sum_probs=173.5
Q ss_pred cccccccccccccccccCcccccceEEEEe-CCCchhhhHHhHhhh-hhHHHHHHHHHHHHhcC-CCCceeEEEEeeccc
Q 005045 381 YSDISKSTDNFSKENLIGTGSFGSVYKGTL-GDGTIVAIKVLKLQQ-QGALKSFIDECNALKST-RHRNILRVITACSSV 457 (717)
Q Consensus 381 ~~~~~~~~~~y~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~ 457 (717)
.+.....++....+..||+|++|.|-..++ .+|+..|+|.+...- .+..++..+|+++..+. .+|.++.+|+..+
T Consensus 38 ~~~~eV~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~-- 115 (282)
T KOG0984|consen 38 DRNFEVPADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALF-- 115 (282)
T ss_pred cCccccchhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhh--
Confidence 334566777888889999999999988885 489999999987552 34567788889887766 8999999999853
Q ss_pred cCCCCceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCC
Q 005045 458 DLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDM 537 (717)
Q Consensus 458 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~ 537 (717)
+....||.||.|+ .+++-+.+.--. +...+++.-.-+||..|++||.|||+. -.++|||+||+||+++.+|
T Consensus 116 ---regdvwIcME~M~-tSldkfy~~v~~---~g~~ipE~vlGkIa~Svv~al~~L~~k--L~vIHRDvKPsNiLIn~~G 186 (282)
T KOG0984|consen 116 ---REGDVWICMELMD-TSLDKFYRKVLK---KGGTIPEDVLGKIAVSVVHALEFLHSK--LSVIHRDVKPSNILINYDG 186 (282)
T ss_pred ---ccccEEEeHHHhh-hhHHHHHHHHHh---cCCcCchHHhhHhHHHHHHHHHHHHHH--hhhhhccCCcceEEEccCC
Confidence 3447899999994 677655432100 116799999999999999999999998 4899999999999999999
Q ss_pred ceEEeeeccchhcccccCCCCCCcceeecccccccccCCCccCC-----CCCcccchhhHHHHHHHHHhCCCCCCCCCCC
Q 005045 538 TAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-----QVSILGDIYSYGILLLEMFTGKRPTGDMFKD 612 (717)
Q Consensus 538 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-----~~~~~sDvwslG~vl~elltg~~p~~~~~~~ 612 (717)
+||+||||.+-.+... ...+...|...|+|||.+.. .|+.+|||||||+++.||-+++.||+.+...
T Consensus 187 qVKiCDFGIsG~L~dS--------iAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tp 258 (282)
T KOG0984|consen 187 QVKICDFGISGYLVDS--------IAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTP 258 (282)
T ss_pred cEEEcccccceeehhh--------hHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCH
Confidence 9999999999876221 11122458889999999754 3788999999999999999999999887555
Q ss_pred chhhhH
Q 005045 613 DFSIHM 618 (717)
Q Consensus 613 ~~~~~~ 618 (717)
-..+.+
T Consensus 259 F~qLkq 264 (282)
T KOG0984|consen 259 FQQLKQ 264 (282)
T ss_pred HHHHHH
Confidence 444433
No 394
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=99.96 E-value=4.6e-31 Score=265.09 Aligned_cols=194 Identities=26% Similarity=0.456 Sum_probs=164.3
Q ss_pred ccccCcccccceEEEEe-CCCchhhhHHhHhhh--hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceEEEEEe
Q 005045 394 ENLIGTGSFGSVYKGTL-GDGTIVAIKVLKLQQ--QGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFKALVFE 470 (717)
Q Consensus 394 ~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~lv~e 470 (717)
.+.+|+|-||+||.|++ ++|+.||||++.+.+ ......+++|+.|++++.||.||.+..- ++..+..++|||
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M-----~ET~ervFVVME 643 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECM-----FETPERVFVVME 643 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEe-----ecCCceEEEEeh
Confidence 47899999999999995 599999999997542 2334778899999999999999998877 566779999999
Q ss_pred cCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCC---CceEEeeeccc
Q 005045 471 FMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKD---MTAHVGDFGLA 547 (717)
Q Consensus 471 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~---~~~kl~Dfg~~ 547 (717)
.+. |+..+++-... .+++++.....+..||+.||+|||.. +|||+||||+||++... -++||+|||.|
T Consensus 644 Kl~-GDMLEMILSsE-----kgRL~er~TkFlvtQIL~ALr~LH~k---nIvHCDLKPENVLLas~~~FPQvKlCDFGfA 714 (888)
T KOG4236|consen 644 KLH-GDMLEMILSSE-----KGRLPERITKFLVTQILVALRYLHFK---NIVHCDLKPENVLLASASPFPQVKLCDFGFA 714 (888)
T ss_pred hhc-chHHHHHHHhh-----cccchHHHHHHHHHHHHHHHHHhhhc---ceeeccCCchheeeccCCCCCceeeccccce
Confidence 995 56666655442 27899999999999999999999997 99999999999999743 38999999999
Q ss_pred hhcccccCCCCCCcceeecccccccccCCCccCCC-CCcccchhhHHHHHHHHHhCCCCCCCC
Q 005045 548 KFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNGQ-VSILGDIYSYGILLLEMFTGKRPTGDM 609 (717)
Q Consensus 548 ~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~sDvwslG~vl~elltg~~p~~~~ 609 (717)
+++. .........||+.|.|||+++.+ |...-|+||.||++|--++|..||.+.
T Consensus 715 RiIg--------EksFRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEd 769 (888)
T KOG4236|consen 715 RIIG--------EKSFRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNED 769 (888)
T ss_pred eecc--------hhhhhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCc
Confidence 9872 23334567899999999997665 788889999999999999999999754
No 395
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=3.5e-30 Score=251.76 Aligned_cols=205 Identities=25% Similarity=0.351 Sum_probs=169.1
Q ss_pred cccccccccccccCcccccceEEEEeC-CCchhhhHHhHhhh---hhHHHHHHHHHHHHhcC-CCCceeEEEEeeccccC
Q 005045 385 SKSTDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQ---QGALKSFIDECNALKST-RHRNILRVITACSSVDL 459 (717)
Q Consensus 385 ~~~~~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~~~ 459 (717)
.....+|..+..+|+|+||.|.+|..+ +.+.+|||+++.+. ....+--+.|-++|+-- +.|.++.+..+ +
T Consensus 345 ~i~~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHSc-----F 419 (683)
T KOG0696|consen 345 RIKATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSC-----F 419 (683)
T ss_pred ceeecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHH-----h
Confidence 445668999999999999999999965 78889999998652 22334455677777766 45566665555 5
Q ss_pred CCCceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCce
Q 005045 460 EGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTA 539 (717)
Q Consensus 460 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~ 539 (717)
+.-+.+|+||||+.||+|--.++ +.+++-+..+..+|..||-||-+||+. ||+.||||.+|||++.+|++
T Consensus 420 QTmDRLyFVMEyvnGGDLMyhiQ-------Q~GkFKEp~AvFYAaEiaigLFFLh~k---gIiYRDLKLDNvmLd~eGHi 489 (683)
T KOG0696|consen 420 QTMDRLYFVMEYVNGGDLMYHIQ-------QVGKFKEPVAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHI 489 (683)
T ss_pred hhhhheeeEEEEecCchhhhHHH-------HhcccCCchhhhhhHHHHHHhhhhhcC---CeeeeeccccceEeccCCce
Confidence 56679999999999999987776 336788888999999999999999997 99999999999999999999
Q ss_pred EEeeeccchhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHhCCCCCCCCCC
Q 005045 540 HVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRPTGDMFK 611 (717)
Q Consensus 540 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~ 611 (717)
||+|||++..- .........+.||+.|+|||++.. .|+.++|+||+||++|||+.|++||++.++
T Consensus 490 Ki~DFGmcKEn-------i~~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE 555 (683)
T KOG0696|consen 490 KIADFGMCKEN-------IFDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDE 555 (683)
T ss_pred Eeeeccccccc-------ccCCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCH
Confidence 99999998742 233344567899999999999655 589999999999999999999999987543
No 396
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.96 E-value=3.3e-29 Score=256.92 Aligned_cols=209 Identities=23% Similarity=0.384 Sum_probs=172.0
Q ss_pred cccccccccCcccccceEEEE-eCCCchhhhHHhHhhh---hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCce
Q 005045 389 DNFSKENLIGTGSFGSVYKGT-LGDGTIVAIKVLKLQQ---QGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDF 464 (717)
Q Consensus 389 ~~y~~~~~ig~g~~g~v~~~~-~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 464 (717)
.-|..++.||-|+||.|.+++ ..+...+|+|.+...+ .........|.+||..-+.+=||++|.. +.+++.
T Consensus 629 SmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyyS-----FQDkdn 703 (1034)
T KOG0608|consen 629 SMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYS-----FQDKDN 703 (1034)
T ss_pred cceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEE-----eccCCc
Confidence 346789999999999999998 4467789999987653 3445677889999999999999999988 677889
Q ss_pred EEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeee
Q 005045 465 KALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDF 544 (717)
Q Consensus 465 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Df 544 (717)
+|+||+|++||++-.++.+. +.+.+..++.++..+.-|+++.|+. |++||||||+||+||.+|++||+||
T Consensus 704 LYFVMdYIPGGDmMSLLIrm-------gIFeE~LARFYIAEltcAiesVHkm---GFIHRDiKPDNILIDrdGHIKLTDF 773 (1034)
T KOG0608|consen 704 LYFVMDYIPGGDMMSLLIRM-------GIFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDF 773 (1034)
T ss_pred eEEEEeccCCccHHHHHHHh-------ccCHHHHHHHHHHHHHHHHHHHHhc---cceecccCccceEEccCCceeeeec
Confidence 99999999999998887644 6799999999999999999999998 9999999999999999999999999
Q ss_pred ccchhc--------ccccCCCCCCcc---------------------------eeecccccccccCCCcc-CCCCCcccc
Q 005045 545 GLAKFL--------FEISDNPSKNQT---------------------------VSIGLKGSIGYIPPEHM-NGQVSILGD 588 (717)
Q Consensus 545 g~~~~~--------~~~~~~~~~~~~---------------------------~~~~~~~~~~y~aPE~~-~~~~~~~sD 588 (717)
|++.-+ ...+++.-.+.. ......||+.|+|||++ ...++..+|
T Consensus 774 GLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cd 853 (1034)
T KOG0608|consen 774 GLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCD 853 (1034)
T ss_pred cccccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccch
Confidence 998532 111111111000 00124699999999996 456999999
Q ss_pred hhhHHHHHHHHHhCCCCCCCCCCC
Q 005045 589 IYSYGILLLEMFTGKRPTGDMFKD 612 (717)
Q Consensus 589 vwslG~vl~elltg~~p~~~~~~~ 612 (717)
+||.|||||||+.|++||....+.
T Consensus 854 wws~gvil~em~~g~~pf~~~tp~ 877 (1034)
T KOG0608|consen 854 WWSVGVILYEMLVGQPPFLADTPG 877 (1034)
T ss_pred hhHhhHHHHHHhhCCCCccCCCCC
Confidence 999999999999999999775443
No 397
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.96 E-value=6.5e-30 Score=271.51 Aligned_cols=246 Identities=26% Similarity=0.411 Sum_probs=183.6
Q ss_pred cccccccCccccc-ceEEEEeCCCchhhhHHhHhhhhhHHHHHHHHHHHHhcC-CCCceeEEEEeeccccCCCCceEEEE
Q 005045 391 FSKENLIGTGSFG-SVYKGTLGDGTIVAIKVLKLQQQGALKSFIDECNALKST-RHRNILRVITACSSVDLEGNDFKALV 468 (717)
Q Consensus 391 y~~~~~ig~g~~g-~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~~~~~~~~~~lv 468 (717)
|.-.+.+|.|..| .||+|.. .||.||||.+-.. ....+.+|++.++.- .||||+++++. -.+..+.||+
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~y-e~R~VAVKrll~e---~~~~A~rEi~lL~eSD~H~NviRyyc~-----E~d~qF~YIa 581 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGVY-EGREVAVKRLLEE---FFDFAQREIQLLQESDEHPNVIRYYCS-----EQDRQFLYIA 581 (903)
T ss_pred eccHHHcccCCCCcEEEEEee-CCceehHHHHhhH---hHHHHHHHHHHHHhccCCCceEEEEee-----ccCCceEEEE
Confidence 3345667888886 6899998 4889999998754 345667899999988 79999999988 4455699999
Q ss_pred EecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCC---C--CceEEee
Q 005045 469 FEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDK---D--MTAHVGD 543 (717)
Q Consensus 469 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~---~--~~~kl~D 543 (717)
.|.| ..+|.|++..... +.........+.+..|+++|+++||+. +||||||||+||+|+. + ..++|+|
T Consensus 582 lELC-~~sL~dlie~~~~---d~~~~~~i~~~~~l~q~~~GlaHLHsl---~iVHRDLkPQNILI~~~~~~~~~ra~iSD 654 (903)
T KOG1027|consen 582 LELC-ACSLQDLIESSGL---DVEMQSDIDPISVLSQIASGLAHLHSL---KIVHRDLKPQNILISVPSADGTLRAKISD 654 (903)
T ss_pred ehHh-hhhHHHHHhcccc---chhhcccccHHHHHHHHHHHHHHHHhc---ccccccCCCceEEEEccCCCcceeEEecc
Confidence 9999 5899999986411 111111145677899999999999997 9999999999999975 3 4899999
Q ss_pred eccchhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHh-CCCCCCCCCCCchhhhHHHH
Q 005045 544 FGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFT-GKRPTGDMFKDDFSIHMFVS 621 (717)
Q Consensus 544 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~ 621 (717)
||+++.+. ..........+..||.+|+|||++.. .-+.++||||+|||+|+.++ |.+||.+....+..+.
T Consensus 655 fglsKkl~----~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~NIl---- 726 (903)
T KOG1027|consen 655 FGLSKKLA----GGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQANIL---- 726 (903)
T ss_pred cccccccC----CCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhhhhhh----
Confidence 99999872 22333344566789999999999765 46779999999999999999 5999976532211110
Q ss_pred hcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHH
Q 005045 622 MALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVV 699 (717)
Q Consensus 622 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil 699 (717)
.... ..-.....++| ...+||.+|+.++|..||+|.+|+
T Consensus 727 -----------~~~~--------------------------~L~~L~~~~d~--eA~dLI~~ml~~dP~~RPsa~~VL 765 (903)
T KOG1027|consen 727 -----------TGNY--------------------------TLVHLEPLPDC--EAKDLISRMLNPDPQLRPSATDVL 765 (903)
T ss_pred -----------cCcc--------------------------ceeeeccCchH--HHHHHHHHhcCCCcccCCCHHHHh
Confidence 0000 00001112222 567899999999999999999998
No 398
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.96 E-value=9.7e-30 Score=281.13 Aligned_cols=208 Identities=21% Similarity=0.219 Sum_probs=139.7
Q ss_pred cccccccccccCcccccceEEEEeC-C----CchhhhHHhHhhhhhHHHHHHHHHHHHhcCCCCceeEEEEeecc-ccCC
Q 005045 387 STDNFSKENLIGTGSFGSVYKGTLG-D----GTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRVITACSS-VDLE 460 (717)
Q Consensus 387 ~~~~y~~~~~ig~g~~g~v~~~~~~-~----~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~-~~~~ 460 (717)
..++|++.++||+|+||.||+|.+. + ++.||+|.+...... +....+ .++...+.++..++..+.. ....
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~--e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~ 205 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAV--EIWMNE--RVRRACPNSCADFVYGFLEPVSSK 205 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchh--HHHHHH--HHHhhchhhHHHHHHhhhcccccc
Confidence 5678999999999999999999965 5 788999986532211 111111 1111122222222111110 0013
Q ss_pred CCceEEEEEecCCCCChhhhccCCCCCc-------------ccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCC
Q 005045 461 GNDFKALVFEFMSNGNLDQWLHPSPAEH-------------YQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLK 527 (717)
Q Consensus 461 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~-------------~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk 527 (717)
.....++||||+++++|.+++....... ..........+..++.||+.||+|||+. +|+|||||
T Consensus 206 ~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~---gIiHRDLK 282 (566)
T PLN03225 206 KEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHST---GIVHRDVK 282 (566)
T ss_pred cCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHC---CEEeCcCC
Confidence 4567899999999999999886432100 0001122345678999999999999997 99999999
Q ss_pred CCCEEeCC-CCceEEeeeccchhcccccCCCCCCcceeecccccccccCCCccCC-----------------------CC
Q 005045 528 PSNVLLDK-DMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-----------------------QV 583 (717)
Q Consensus 528 p~NIll~~-~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-----------------------~~ 583 (717)
|+|||++. ++.+||+|||++..+... .........+++.|+|||.+.. .+
T Consensus 283 P~NILl~~~~~~~KL~DFGlA~~l~~~------~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~ 356 (566)
T PLN03225 283 PQNIIFSEGSGSFKIIDLGAAADLRVG------INYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNL 356 (566)
T ss_pred HHHEEEeCCCCcEEEEeCCCccccccc------cccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccC
Confidence 99999985 589999999999754211 1112234568899999996321 13
Q ss_pred CcccchhhHHHHHHHHHhCCCCCC
Q 005045 584 SILGDIYSYGILLLEMFTGKRPTG 607 (717)
Q Consensus 584 ~~~sDvwslG~vl~elltg~~p~~ 607 (717)
+.++|||||||++|||+++..|++
T Consensus 357 ~~k~DVwSlGviL~el~~~~~~~~ 380 (566)
T PLN03225 357 PDRFDIYSAGLIFLQMAFPNLRSD 380 (566)
T ss_pred CCCcccHHHHHHHHHHHhCcCCCc
Confidence 346699999999999999776643
No 399
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=7.6e-29 Score=236.24 Aligned_cols=204 Identities=24% Similarity=0.376 Sum_probs=176.5
Q ss_pred ccccccccccccccCcccccceEEEEeC-CCchhhhHHhHhh---hhhHHHHHHHHHHHHhcC-CCCceeEEEEeecccc
Q 005045 384 ISKSTDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQ---QQGALKSFIDECNALKST-RHRNILRVITACSSVD 458 (717)
Q Consensus 384 ~~~~~~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~~ 458 (717)
..-..++|..++.||+|++++|-.++++ +.+.+|+|+++.. +.+.....+.|-.+..+- +||.++.+..+
T Consensus 245 ~~l~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhsc----- 319 (593)
T KOG0695|consen 245 QGLGLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSC----- 319 (593)
T ss_pred cccccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhh-----
Confidence 3445778999999999999999999954 8899999999864 345567788888888876 79999998877
Q ss_pred CCCCceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCc
Q 005045 459 LEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMT 538 (717)
Q Consensus 459 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~ 538 (717)
++....+++|.||++||+|--.+++. .+++++.++.+...|.-||.|||+. ||+.||+|.+|++++.+|+
T Consensus 320 fqtesrlffvieyv~ggdlmfhmqrq-------rklpeeharfys~ei~lal~flh~r---giiyrdlkldnvlldaegh 389 (593)
T KOG0695|consen 320 FQTESRLFFVIEYVNGGDLMFHMQRQ-------RKLPEEHARFYSAEICLALNFLHER---GIIYRDLKLDNVLLDAEGH 389 (593)
T ss_pred hcccceEEEEEEEecCcceeeehhhh-------hcCcHHHhhhhhHHHHHHHHHHhhc---CeeeeeccccceEEccCCc
Confidence 56667899999999999998777655 6799999999999999999999997 9999999999999999999
Q ss_pred eEEeeeccchhcccccCCCCCCcceeecccccccccCCCccCCC-CCcccchhhHHHHHHHHHhCCCCCCCC
Q 005045 539 AHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNGQ-VSILGDIYSYGILLLEMFTGKRPTGDM 609 (717)
Q Consensus 539 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~sDvwslG~vl~elltg~~p~~~~ 609 (717)
+|++|+|+++.-. .+......+.||+.|.|||+++|. |+..+|+|++||+++||+.|+.||+-.
T Consensus 390 ikltdygmcke~l-------~~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdiv 454 (593)
T KOG0695|consen 390 IKLTDYGMCKEGL-------GPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIV 454 (593)
T ss_pred eeecccchhhcCC-------CCCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCccee
Confidence 9999999997542 222234568899999999999886 999999999999999999999999754
No 400
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.96 E-value=1.3e-28 Score=246.49 Aligned_cols=237 Identities=29% Similarity=0.384 Sum_probs=185.4
Q ss_pred cccceEEEEeC-CCchhhhHHhHhhhhhH-HHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceEEEEEecCCCCChh
Q 005045 401 SFGSVYKGTLG-DGTIVAIKVLKLQQQGA-LKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLD 478 (717)
Q Consensus 401 ~~g~v~~~~~~-~~~~vavK~~~~~~~~~-~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~ 478 (717)
++|.||.|... +++.+++|++....... .+.+.+|++.+++++|++++++++.+.. ....+++||++++++|.
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~-----~~~~~l~~e~~~~~~L~ 75 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFED-----EDKLYLVMEYCDGGDLF 75 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheee-----CCEEEEEEeCCCCCCHH
Confidence 57899999976 68999999987654433 6889999999999999999999998543 35889999999988999
Q ss_pred hhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeeccchhcccccCCCC
Q 005045 479 QWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPS 558 (717)
Q Consensus 479 ~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~ 558 (717)
+++... ..+++..+..++.+++.++++||+. +++|+||+|+||+++.++.++++|||.+.......
T Consensus 76 ~~~~~~-------~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~---- 141 (244)
T smart00220 76 DLLKKR-------GRLSEDEARFYARQILSALEYLHSN---GIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG---- 141 (244)
T ss_pred HHHHhc-------cCCCHHHHHHHHHHHHHHHHHHHHc---CeecCCcCHHHeEECCCCcEEEccccceeeecccc----
Confidence 998754 2378899999999999999999998 99999999999999999999999999988752211
Q ss_pred CCcceeecccccccccCCCccC-CCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHHHhcCChhhhhhcCCCCC
Q 005045 559 KNQTVSIGLKGSIGYIPPEHMN-GQVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVSMALPDHVMDILDPSMP 637 (717)
Q Consensus 559 ~~~~~~~~~~~~~~y~aPE~~~-~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 637 (717)
......++..|+|||... +.++.++||||||+++|++++|..||........ ...... .....
T Consensus 142 ----~~~~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~-~~~~~~-----------~~~~~ 205 (244)
T smart00220 142 ----LLTTFVGTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLE-LFKKIG-----------KPKPP 205 (244)
T ss_pred ----ccccccCCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHH-HHHHHh-----------ccCCC
Confidence 223345788899999965 4578899999999999999999999865311111 110100 00000
Q ss_pred CCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHH
Q 005045 638 LDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVN 700 (717)
Q Consensus 638 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~ 700 (717)
... ....++..+.+++.+|+..+|++||++.++++
T Consensus 206 ~~~----------------------------~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~ 240 (244)
T smart00220 206 FPP----------------------------PEWKISPEAKDLIRKLLVKDPEKRLTAEEALQ 240 (244)
T ss_pred Ccc----------------------------ccccCCHHHHHHHHHHccCCchhccCHHHHhh
Confidence 000 00003567889999999999999999999986
No 401
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.95 E-value=6.2e-29 Score=253.02 Aligned_cols=198 Identities=23% Similarity=0.359 Sum_probs=170.3
Q ss_pred cccccccccccCcccccceEEEEeC-CCchhhhHHhHhhhh--------hHHHHHHHHHHHHhcCC---CCceeEEEEee
Q 005045 387 STDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQQ--------GALKSFIDECNALKSTR---HRNILRVITAC 454 (717)
Q Consensus 387 ~~~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~~--------~~~~~~~~e~~~l~~l~---h~ni~~~~~~~ 454 (717)
...+|+.++++|.|+||.|++|.++ +...|++|.+.+.+. ...-..-.|++||..++ |+||++++++
T Consensus 559 k~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdf- 637 (772)
T KOG1152|consen 559 KFSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDF- 637 (772)
T ss_pred ccccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhhe-
Confidence 4567999999999999999999977 566788898875431 11122456999999996 9999999999
Q ss_pred ccccCCCCceEEEEEecC-CCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEe
Q 005045 455 SSVDLEGNDFKALVFEFM-SNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLL 533 (717)
Q Consensus 455 ~~~~~~~~~~~~lv~e~~-~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll 533 (717)
+++++.+|++||.- +|.+|.+++... +.+++.++..|++||+.|+++||++ ||||||||-+|+.+
T Consensus 638 ----FEddd~yyl~te~hg~gIDLFd~IE~k-------p~m~E~eAk~IFkQV~agi~hlh~~---~ivhrdikdenviv 703 (772)
T KOG1152|consen 638 ----FEDDDYYYLETEVHGEGIDLFDFIEFK-------PRMDEPEAKLIFKQVVAGIKHLHDQ---GIVHRDIKDENVIV 703 (772)
T ss_pred ----eecCCeeEEEecCCCCCcchhhhhhcc-------CccchHHHHHHHHHHHhcccccccc---CceecccccccEEE
Confidence 77888999999984 456889999866 6799999999999999999999998 99999999999999
Q ss_pred CCCCceEEeeeccchhcccccCCCCCCcceeecccccccccCCCccCCC--CCcccchhhHHHHHHHHHhCCCCCCC
Q 005045 534 DKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNGQ--VSILGDIYSYGILLLEMFTGKRPTGD 608 (717)
Q Consensus 534 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~sDvwslG~vl~elltg~~p~~~ 608 (717)
+.+|-+||+|||.+... ..+....+.||..|.|||++.|. .+..-|||++|+++|.++....||..
T Consensus 704 d~~g~~klidfgsaa~~---------ksgpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyyn 771 (772)
T KOG1152|consen 704 DSNGFVKLIDFGSAAYT---------KSGPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYYN 771 (772)
T ss_pred ecCCeEEEeeccchhhh---------cCCCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCcC
Confidence 99999999999998865 34455668899999999999886 37888999999999999999999864
No 402
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.95 E-value=8.5e-31 Score=280.71 Aligned_cols=344 Identities=26% Similarity=0.373 Sum_probs=204.1
Q ss_pred ceecEEEcCCCcCcCCCCcCCcCCCCCCEEECCCCcccccCCcCCCCCCCCCEEEccCccccccCCccccCCCCCCEEec
Q 005045 10 LMTQDLNLTYNYLSGKIPTNLSHCTELRSFEASVNDFVGQIPNQLSSLTKLEIIGLGGSNLTGNVPAWIGNFSSLKALSL 89 (717)
Q Consensus 10 ~~~~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L 89 (717)
+.++.|+|++|++. ..|..+..+.+|+.|+++.|.|. ..|.+.+++.+|++|.|.+|.+. ..|..+..+.+|+.||+
T Consensus 45 v~L~~l~lsnn~~~-~fp~~it~l~~L~~ln~s~n~i~-~vp~s~~~~~~l~~lnL~~n~l~-~lP~~~~~lknl~~Ldl 121 (1081)
T KOG0618|consen 45 VKLKSLDLSNNQIS-SFPIQITLLSHLRQLNLSRNYIR-SVPSSCSNMRNLQYLNLKNNRLQ-SLPASISELKNLQYLDL 121 (1081)
T ss_pred eeeEEeeccccccc-cCCchhhhHHHHhhcccchhhHh-hCchhhhhhhcchhheeccchhh-cCchhHHhhhccccccc
Confidence 36888999999887 78888888899999999999888 78888888889999999888888 88888888899999999
Q ss_pred cCCcCcccCChhhhccCCCCeEeccCC-------------------CCCCCCCccccCCCCccEEEcccCcccccCCcc-
Q 005045 90 AWNNLRGSIPNELGQLSGLGFFTLYGN-------------------FISGIIPSSIYNISSIYYFSVTQNQLHGQLPTD- 149 (717)
Q Consensus 90 ~~n~l~~~~~~~~~~l~~L~~L~L~~N-------------------~i~~~~~~~~~~l~~L~~L~L~~N~l~~~l~~~- 149 (717)
|+|++. .+|..+..++.+..+..++| .+.+.++..+..++. .|+|++|.+. .+...
T Consensus 122 S~N~f~-~~Pl~i~~lt~~~~~~~s~N~~~~~lg~~~ik~~~l~~n~l~~~~~~~i~~l~~--~ldLr~N~~~-~~dls~ 197 (1081)
T KOG0618|consen 122 SFNHFG-PIPLVIEVLTAEEELAASNNEKIQRLGQTSIKKLDLRLNVLGGSFLIDIYNLTH--QLDLRYNEME-VLDLSN 197 (1081)
T ss_pred chhccC-CCchhHHhhhHHHHHhhhcchhhhhhccccchhhhhhhhhcccchhcchhhhhe--eeecccchhh-hhhhhh
Confidence 998887 56655555544444444444 333333333333333 3555555553 11110
Q ss_pred ----------------cccCCCCcceeecccccccccCCccCCCCCCCCEEeccCccccccCCCCccCCCCCCeeecccc
Q 005045 150 ----------------VGLTLPNLKIFAGAVNYFTGSIPVSLSNASNLQVLDFAENGLTGTIPGNFGSLKDLVRLNFDQN 213 (717)
Q Consensus 150 ----------------~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N 213 (717)
+-...++|+.|+.++|.++...+.. .-.+|+++++++|+++ .+|++++.+.+|+.+...+|
T Consensus 198 ~~~l~~l~c~rn~ls~l~~~g~~l~~L~a~~n~l~~~~~~p--~p~nl~~~dis~n~l~-~lp~wi~~~~nle~l~~n~N 274 (1081)
T KOG0618|consen 198 LANLEVLHCERNQLSELEISGPSLTALYADHNPLTTLDVHP--VPLNLQYLDISHNNLS-NLPEWIGACANLEALNANHN 274 (1081)
T ss_pred ccchhhhhhhhcccceEEecCcchheeeeccCcceeecccc--ccccceeeecchhhhh-cchHHHHhcccceEecccch
Confidence 0012233444444444444221111 1135555666666655 34455555566666655555
Q ss_pred ccCCcccCch----------------hhhhhhccCCCCCEEEeecCcccCcCchhhhhcc--------------------
Q 005045 214 ELGSREIGDL----------------NFLKFLANCTSLEVLGLARNSFGGEMPISIANLS-------------------- 257 (717)
Q Consensus 214 ~l~~~~~~~~----------------~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~-------------------- 257 (717)
++..++.... ..+....+++.|++|+|..|+|. .+|+.+....
T Consensus 275 ~l~~lp~ri~~~~~L~~l~~~~nel~yip~~le~~~sL~tLdL~~N~L~-~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~ 353 (1081)
T KOG0618|consen 275 RLVALPLRISRITSLVSLSAAYNELEYIPPFLEGLKSLRTLDLQSNNLP-SLPDNFLAVLNASLNTLNVSSNKLSTLPSY 353 (1081)
T ss_pred hHHhhHHHHhhhhhHHHHHhhhhhhhhCCCcccccceeeeeeehhcccc-ccchHHHhhhhHHHHHHhhhhccccccccc
Confidence 5544332111 01233445677778888888777 6665443221
Q ss_pred -----ccccEEecCCCccCCCCCccccCCCCCCEEEccCCcCccccchhhhcCCCCCeEEcccCcCCCCCCccccccccc
Q 005045 258 -----THLRRLTMGENLMHGNIPVGIGNLVNLNLLGLEGNNLSGSVPEVIGRLNKLEGLGLNVNKFSGLIPSSLGNLTIL 332 (717)
Q Consensus 258 -----~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 332 (717)
..|+.|++.+|.++......+.+..+|+.|+|++|+|.......+.+|+.|+.|+||+|+++ .+|..+..++.|
T Consensus 354 ~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L 432 (1081)
T KOG0618|consen 354 EENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLNSFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRL 432 (1081)
T ss_pred cchhhHHHHHHHHhcCcccccchhhhccccceeeeeecccccccCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhh
Confidence 23455566666666555555666666666666666666333334556666666666666666 334555555555
Q ss_pred ceeecccccccccCCcCccCcCCCceEEeecccCC
Q 005045 333 TRLWMEENRLEGSIPPSLGNCQKLLVLNLSSNDLN 367 (717)
Q Consensus 333 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 367 (717)
++|...+|++. ..| .+..++.|+.+|++.|+|+
T Consensus 433 ~tL~ahsN~l~-~fP-e~~~l~qL~~lDlS~N~L~ 465 (1081)
T KOG0618|consen 433 HTLRAHSNQLL-SFP-ELAQLPQLKVLDLSCNNLS 465 (1081)
T ss_pred HHHhhcCCcee-ech-hhhhcCcceEEecccchhh
Confidence 55555555555 444 5555555555555555554
No 403
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.95 E-value=4.6e-28 Score=260.51 Aligned_cols=215 Identities=23% Similarity=0.278 Sum_probs=152.5
Q ss_pred cccccccccccccCcccccceEEEEe-----------------CCCchhhhHHhHhhhhhHHHH--------------HH
Q 005045 385 SKSTDNFSKENLIGTGSFGSVYKGTL-----------------GDGTIVAIKVLKLQQQGALKS--------------FI 433 (717)
Q Consensus 385 ~~~~~~y~~~~~ig~g~~g~v~~~~~-----------------~~~~~vavK~~~~~~~~~~~~--------------~~ 433 (717)
....++|++.++||+|+||.||+|.. ..++.||||.+........+. ..
T Consensus 141 r~~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~ 220 (507)
T PLN03224 141 RWSSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGM 220 (507)
T ss_pred CccccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhH
Confidence 34577999999999999999999863 245679999886443222222 33
Q ss_pred HHHHHHhcCCCCce-----eEEEEeecccc---CCCCceEEEEEecCCCCChhhhccCCCCC-----------------c
Q 005045 434 DECNALKSTRHRNI-----LRVITACSSVD---LEGNDFKALVFEFMSNGNLDQWLHPSPAE-----------------H 488 (717)
Q Consensus 434 ~e~~~l~~l~h~ni-----~~~~~~~~~~~---~~~~~~~~lv~e~~~~~~L~~~l~~~~~~-----------------~ 488 (717)
.|+..+.+++|.++ +++++++.... ....+..++||||+++++|.++++..... .
T Consensus 221 vE~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~ 300 (507)
T PLN03224 221 VEAYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDN 300 (507)
T ss_pred HHHHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhh
Confidence 46666777766554 55555543321 11234689999999999999988643110 0
Q ss_pred ccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeeccchhcccccCCCCCCcceeeccc
Q 005045 489 YQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLK 568 (717)
Q Consensus 489 ~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~ 568 (717)
......++..++.++.|++.|+.|+|+. +|+||||||+||+++.++.+||+|||++...... .........
T Consensus 301 ~~~~~~~~~~~~~i~~ql~~aL~~lH~~---~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~------~~~~~~~g~ 371 (507)
T PLN03224 301 MPQDKRDINVIKGVMRQVLTGLRKLHRI---GIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTG------INFNPLYGM 371 (507)
T ss_pred cccccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCchHhEEECCCCcEEEEeCcCccccccC------CccCccccC
Confidence 0113456788999999999999999997 9999999999999999999999999998754211 011111123
Q ss_pred ccccccCCCccCCC---------------------C--CcccchhhHHHHHHHHHhCCC-CCCC
Q 005045 569 GSIGYIPPEHMNGQ---------------------V--SILGDIYSYGILLLEMFTGKR-PTGD 608 (717)
Q Consensus 569 ~~~~y~aPE~~~~~---------------------~--~~~sDvwslG~vl~elltg~~-p~~~ 608 (717)
+++.|+|||.+... + ..+.||||+||++|+|++|.. ||..
T Consensus 372 ~tp~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~ 435 (507)
T PLN03224 372 LDPRYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVAN 435 (507)
T ss_pred CCcceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccc
Confidence 47899999985321 1 134699999999999999875 6643
No 404
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.95 E-value=2.1e-30 Score=252.74 Aligned_cols=350 Identities=23% Similarity=0.260 Sum_probs=253.3
Q ss_pred cceeeCCcc--eecEEEcCCCcCcCCCCcCCcCCCCCCEEECCCCcccccCCcCCCCCCCCCEEEccC-ccccccCCccc
Q 005045 2 ELIMIPEHL--MTQDLNLTYNYLSGKIPTNLSHCTELRSFEASVNDFVGQIPNQLSSLTKLEIIGLGG-SNLTGNVPAWI 78 (717)
Q Consensus 2 ~l~~~p~~~--~~~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~-n~l~~~~p~~~ 78 (717)
.|+.||..+ .++.++|..|+|+.+.|.+|+.+++|+.||||+|.|+.+-|++|.++.+|..|.+.+ |+|+....+.|
T Consensus 57 GL~eVP~~LP~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F 136 (498)
T KOG4237|consen 57 GLTEVPANLPPETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGAF 136 (498)
T ss_pred CcccCcccCCCcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhHh
Confidence 578999999 899999999999999999999999999999999999999999999999999887777 99997777789
Q ss_pred cCCCCCCEEeccCCcCcccCChhhhccCCCCeEeccCCCCCCCCCccccCCCCccEEEcccCccc---------------
Q 005045 79 GNFSSLKALSLAWNNLRGSIPNELGQLSGLGFFTLYGNFISGIIPSSIYNISSIYYFSVTQNQLH--------------- 143 (717)
Q Consensus 79 ~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~--------------- 143 (717)
.+|.+|+.|.+.-|++.-+..++|..+++|..|.|.+|.+..+.-.+|..+..++.+++..|.+.
T Consensus 137 ~gL~slqrLllNan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~icdCnL~wla~~~a~~ 216 (498)
T KOG4237|consen 137 GGLSSLQRLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFICDCNLPWLADDLAMN 216 (498)
T ss_pred hhHHHHHHHhcChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCccccccccchhhhHHhhc
Confidence 99999999999999999888999999999999999999999666669999999999999988721
Q ss_pred --------------------ccCCcccccCCCCccee--ecc-cccccccCC-ccCCCCCCCCEEeccCccccccCCCCc
Q 005045 144 --------------------GQLPTDVGLTLPNLKIF--AGA-VNYFTGSIP-VSLSNASNLQVLDFAENGLTGTIPGNF 199 (717)
Q Consensus 144 --------------------~~l~~~~~~~l~~L~~L--~l~-~n~l~~~~~-~~~~~l~~L~~L~l~~N~l~~~~~~~~ 199 (717)
+.++..-|. -.++.+ .++ .+......| ..|..+++|+.|+|++|+|+.+.+.+|
T Consensus 217 ~ietsgarc~~p~rl~~~Ri~q~~a~kf~--c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~~aF 294 (498)
T KOG4237|consen 217 PIETSGARCVSPYRLYYKRINQEDARKFL--CSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRIEDGAF 294 (498)
T ss_pred hhhcccceecchHHHHHHHhcccchhhhh--hhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccchhhhhhh
Confidence 001111110 001111 111 111112222 336677777777777777777777777
Q ss_pred cCCCCCCeeeccccccCCcccCchhhhhhhccCCCCCEEEeecCcccCcCchhhhhccccccEEecCCCccCCC-----C
Q 005045 200 GSLKDLVRLNFDQNELGSREIGDLNFLKFLANCTSLEVLGLARNSFGGEMPISIANLSTHLRRLTMGENLMHGN-----I 274 (717)
Q Consensus 200 ~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~L~~L~l~~N~l~~~-----~ 274 (717)
.+...+++|.|..|+|..+. ...|.++..|+.|+|.+|+|+...|..|..+ ..|.+|.+-.|.+.-. .
T Consensus 295 e~~a~l~eL~L~~N~l~~v~------~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~-~~l~~l~l~~Np~~CnC~l~wl 367 (498)
T KOG4237|consen 295 EGAAELQELYLTRNKLEFVS------SGMFQGLSGLKTLSLYDNQITTVAPGAFQTL-FSLSTLNLLSNPFNCNCRLAWL 367 (498)
T ss_pred cchhhhhhhhcCcchHHHHH------HHhhhccccceeeeecCCeeEEEeccccccc-ceeeeeehccCcccCccchHHH
Confidence 77777777777777777665 5567777777777777777776666666555 3677777766654310 0
Q ss_pred Ccc-----------ccCCCCCCEEEccCCcCccc---cch------------------hhhcC-------------CCCC
Q 005045 275 PVG-----------IGNLVNLNLLGLEGNNLSGS---VPE------------------VIGRL-------------NKLE 309 (717)
Q Consensus 275 ~~~-----------~~~l~~L~~L~L~~N~l~~~---~~~------------------~~~~l-------------~~L~ 309 (717)
.+| -.....++.+.++.+.+... .|+ .+..+ ..-.
T Consensus 368 ~~Wlr~~~~~~~~~Cq~p~~~~~~~~~dv~~~~~~c~~~ee~~~~~s~~cP~~c~c~~tVvRcSnk~lk~lp~~iP~d~t 447 (498)
T KOG4237|consen 368 GEWLRKKSVVGNPRCQSPGFVRQIPISDVAFGDFRCGGPEELGCLTSSPCPPPCTCLDTVVRCSNKLLKLLPRGIPVDVT 447 (498)
T ss_pred HHHHhhCCCCCCCCCCCCchhccccchhccccccccCCccccCCCCCCCCCCCcchhhhhHhhcccchhhcCCCCCchhH
Confidence 111 11122455555555543211 111 01111 1245
Q ss_pred eEEcccCcCCCCCCcccccccccceeecccccccccCCcCccCcCCCceEEeecc
Q 005045 310 GLGLNVNKFSGLIPSSLGNLTILTRLWMEENRLEGSIPPSLGNCQKLLVLNLSSN 364 (717)
Q Consensus 310 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N 364 (717)
+|++.+|.++.+ |.. .+..| .+|+++|+++...-..|.++.+|.+|-|+.|
T Consensus 448 elyl~gn~~~~v-p~~--~~~~l-~~dls~n~i~~Lsn~tf~n~tql~tlilsyn 498 (498)
T KOG4237|consen 448 ELYLDGNAITSV-PDE--LLRSL-LLDLSNNRISSLSNYTFSNMTQLSTLILSYN 498 (498)
T ss_pred HHhcccchhccc-CHH--HHhhh-hcccccCceehhhcccccchhhhheeEEecC
Confidence 689999999955 554 66778 8999999998666678999999999998876
No 405
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=1.2e-29 Score=235.30 Aligned_cols=206 Identities=24% Similarity=0.311 Sum_probs=164.8
Q ss_pred cccccccccCcccccceEEEEeC-CCchhhhHHhHhh--hhhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceE
Q 005045 389 DNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQ--QQGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFK 465 (717)
Q Consensus 389 ~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~ 465 (717)
.+.+--+.||.|+||.||.+.++ +|+.||+|.+... .-...+++.+|++++..++|.|++..++...-...+.=...
T Consensus 53 ~Di~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEi 132 (449)
T KOG0664|consen 53 QDIQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQEL 132 (449)
T ss_pred ccCCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHH
Confidence 34556789999999999999965 8999999998643 23346788899999999999999988876433222222246
Q ss_pred EEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeec
Q 005045 466 ALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFG 545 (717)
Q Consensus 466 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg 545 (717)
|+++|.+ ..+|..++-.. +.++.+.++-+..||++||.|||+. +|.||||||.|.+++.+..+||+|||
T Consensus 133 YV~TELm-QSDLHKIIVSP-------Q~Ls~DHvKVFlYQILRGLKYLHsA---~ILHRDIKPGNLLVNSNCvLKICDFG 201 (449)
T KOG0664|consen 133 YVLTELM-QSDLHKIIVSP-------QALTPDHVKVFVYQILRGLKYLHTA---NILHRDIKPGNLLVNSNCILKICDFG 201 (449)
T ss_pred HHHHHHH-HhhhhheeccC-------CCCCcchhhhhHHHHHhhhHHHhhc---chhhccCCCccEEeccCceEEecccc
Confidence 8888988 45777776543 5688888899999999999999998 99999999999999999999999999
Q ss_pred cchhcccccCCCCCCcceeecccccccccCCCccCC--CCCcccchhhHHHHHHHHHhCCCCCCCCCC
Q 005045 546 LAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG--QVSILGDIYSYGILLLEMFTGKRPTGDMFK 611 (717)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~sDvwslG~vl~elltg~~p~~~~~~ 611 (717)
+++.- ..+....-+...-|..|+|||++.| +|+.+.||||.||++.|++..+..|....+
T Consensus 202 LARve------e~d~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~P 263 (449)
T KOG0664|consen 202 LARTW------DQRDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGP 263 (449)
T ss_pred ccccc------chhhhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccCh
Confidence 99853 1122222334457889999999766 489999999999999999999888866533
No 406
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.95 E-value=4.6e-30 Score=275.13 Aligned_cols=342 Identities=26% Similarity=0.340 Sum_probs=231.0
Q ss_pred eecEEEcCCCcCcCCCCcCCcCCCCCCEEECCCCcccccCCcCCCCCCCCCEEEccCccccccCCccccCCCCCCEEecc
Q 005045 11 MTQDLNLTYNYLSGKIPTNLSHCTELRSFEASVNDFVGQIPNQLSSLTKLEIIGLGGSNLTGNVPAWIGNFSSLKALSLA 90 (717)
Q Consensus 11 ~~~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~ 90 (717)
+|++|+++.|-|. ..|.+.+++.+|++|.|.+|.+. ..|..+..+.+|+.|+++.|.+. .+|..+..++.+++++.+
T Consensus 69 ~L~~ln~s~n~i~-~vp~s~~~~~~l~~lnL~~n~l~-~lP~~~~~lknl~~LdlS~N~f~-~~Pl~i~~lt~~~~~~~s 145 (1081)
T KOG0618|consen 69 HLRQLNLSRNYIR-SVPSSCSNMRNLQYLNLKNNRLQ-SLPASISELKNLQYLDLSFNHFG-PIPLVIEVLTAEEELAAS 145 (1081)
T ss_pred HHhhcccchhhHh-hCchhhhhhhcchhheeccchhh-cCchhHHhhhcccccccchhccC-CCchhHHhhhHHHHHhhh
Confidence 5677777777776 56667777777777777777766 67777777777777777777766 555544444444444433
Q ss_pred CC-------------------cCcccCChhhhccCCCCeEeccCCCCCCCCCcc--------------------------
Q 005045 91 WN-------------------NLRGSIPNELGQLSGLGFFTLYGNFISGIIPSS-------------------------- 125 (717)
Q Consensus 91 ~n-------------------~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~-------------------------- 125 (717)
+| .+.+.++..+..+++ .|+|++|.+....-..
T Consensus 146 ~N~~~~~lg~~~ik~~~l~~n~l~~~~~~~i~~l~~--~ldLr~N~~~~~dls~~~~l~~l~c~rn~ls~l~~~g~~l~~ 223 (1081)
T KOG0618|consen 146 NNEKIQRLGQTSIKKLDLRLNVLGGSFLIDIYNLTH--QLDLRYNEMEVLDLSNLANLEVLHCERNQLSELEISGPSLTA 223 (1081)
T ss_pred cchhhhhhccccchhhhhhhhhcccchhcchhhhhe--eeecccchhhhhhhhhccchhhhhhhhcccceEEecCcchhe
Confidence 33 222222222222222 3444444443110000
Q ss_pred -------------ccCCCCccEEEcccCcccccCCcccccCCCCcceeecccccccccCCccCCCCCCCCEEeccCcccc
Q 005045 126 -------------IYNISSIYYFSVTQNQLHGQLPTDVGLTLPNLKIFAGAVNYFTGSIPVSLSNASNLQVLDFAENGLT 192 (717)
Q Consensus 126 -------------~~~l~~L~~L~L~~N~l~~~l~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~ 192 (717)
-.--.+|+++++++|+++ .+| ++...+++|+.++...|.+. .+|..+...++|+.|++..|.++
T Consensus 224 L~a~~n~l~~~~~~p~p~nl~~~dis~n~l~-~lp-~wi~~~~nle~l~~n~N~l~-~lp~ri~~~~~L~~l~~~~nel~ 300 (1081)
T KOG0618|consen 224 LYADHNPLTTLDVHPVPLNLQYLDISHNNLS-NLP-EWIGACANLEALNANHNRLV-ALPLRISRITSLVSLSAAYNELE 300 (1081)
T ss_pred eeeccCcceeeccccccccceeeecchhhhh-cch-HHHHhcccceEecccchhHH-hhHHHHhhhhhHHHHHhhhhhhh
Confidence 011124555566666665 555 33335666666666666663 45555555566666666666666
Q ss_pred ccCCCCccCCCCCCeeeccccccCCcccCchhhhhh----h---------------ccCCCCCEEEeecCcccCcCchhh
Q 005045 193 GTIPGNFGSLKDLVRLNFDQNELGSREIGDLNFLKF----L---------------ANCTSLEVLGLARNSFGGEMPISI 253 (717)
Q Consensus 193 ~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~----~---------------~~l~~L~~L~L~~N~l~~~~p~~~ 253 (717)
.+|.....++.|++|+|..|+|...+..-+..+.. + ..++.|+.|.+.+|.+++..-..+
T Consensus 301 -yip~~le~~~sL~tLdL~~N~L~~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l 379 (1081)
T KOG0618|consen 301 -YIPPFLEGLKSLRTLDLQSNNLPSLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHLTDSCFPVL 379 (1081)
T ss_pred -hCCCcccccceeeeeeehhccccccchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcCcccccchhhh
Confidence 56666777888999999999888876422211111 0 134568899999999998776677
Q ss_pred hhccccccEEecCCCccCCCCCccccCCCCCCEEEccCCcCccccchhhhcCCCCCeEEcccCcCCCCCCcccccccccc
Q 005045 254 ANLSTHLRRLTMGENLMHGNIPVGIGNLVNLNLLGLEGNNLSGSVPEVIGRLNKLEGLGLNVNKFSGLIPSSLGNLTILT 333 (717)
Q Consensus 254 ~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 333 (717)
.+. ++|+.|+|++|++.......+.++..|++|+||||+++ .+|..+..++.|++|...+|++. ..| .+..++.|+
T Consensus 380 ~~~-~hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~-~fP-e~~~l~qL~ 455 (1081)
T KOG0618|consen 380 VNF-KHLKVLHLSYNRLNSFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRAHSNQLL-SFP-ELAQLPQLK 455 (1081)
T ss_pred ccc-cceeeeeecccccccCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhhcCCcee-ech-hhhhcCcce
Confidence 776 59999999999999655566999999999999999999 78999999999999999999998 556 789999999
Q ss_pred eeeccccccccc-CCcCccCcCCCceEEeecccC
Q 005045 334 RLWMEENRLEGS-IPPSLGNCQKLLVLNLSSNDL 366 (717)
Q Consensus 334 ~L~L~~N~l~~~-~p~~~~~l~~L~~L~l~~N~l 366 (717)
.+|++.|+|+.. +|.... .++|++||++||..
T Consensus 456 ~lDlS~N~L~~~~l~~~~p-~p~LkyLdlSGN~~ 488 (1081)
T KOG0618|consen 456 VLDLSCNNLSEVTLPEALP-SPNLKYLDLSGNTR 488 (1081)
T ss_pred EEecccchhhhhhhhhhCC-CcccceeeccCCcc
Confidence 999999999854 333333 38999999999984
No 407
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.95 E-value=4.3e-28 Score=230.99 Aligned_cols=199 Identities=28% Similarity=0.301 Sum_probs=163.9
Q ss_pred ccccccccccCcccccceEEEEeC-CCchhhhHHhHhh--hhhHHHHHHHHHHHHhcCCCCceeEEEEeecccc-CCCCc
Q 005045 388 TDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQ--QQGALKSFIDECNALKSTRHRNILRVITACSSVD-LEGND 463 (717)
Q Consensus 388 ~~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~-~~~~~ 463 (717)
..+|.-+..+|.|+. .|..|.+. .+++||+|..... .....++..+|...+..+.|+||++.+.++.-.. .+.-.
T Consensus 16 ~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~ 94 (369)
T KOG0665|consen 16 PKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQ 94 (369)
T ss_pred eeeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHH
Confidence 458888899999998 77777765 7899999988643 2334578889999999999999999999864322 11122
Q ss_pred eEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEee
Q 005045 464 FKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGD 543 (717)
Q Consensus 464 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~D 543 (717)
..|+|||++ ..++.+.+. -.++-..+.++..|++.|+.|+|+. ||+||||||+||++..++.+||.|
T Consensus 95 e~y~v~e~m-~~nl~~vi~---------~elDH~tis~i~yq~~~~ik~lhs~---~IihRdLkPsnivv~~~~~lKi~d 161 (369)
T KOG0665|consen 95 EVYLVMELM-DANLCQVIL---------MELDHETISYILYQMLCGIKHLHSA---GIIHRDLKPSNIVVNSDCTLKILD 161 (369)
T ss_pred hHHHHHHhh-hhHHHHHHH---------HhcchHHHHHHHHHHHHHHHHHHhc---ceeecccCcccceecchhheeecc
Confidence 479999999 579988876 2356678899999999999999998 999999999999999999999999
Q ss_pred eccchhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHhCCCCCCC
Q 005045 544 FGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRPTGD 608 (717)
Q Consensus 544 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~elltg~~p~~~ 608 (717)
||+|+.- .....-+.+..+..|+|||++-| .+.+.+||||+||++.||++|...|.+
T Consensus 162 fg~ar~e--------~~~~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g 219 (369)
T KOG0665|consen 162 FGLARTE--------DTDFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPG 219 (369)
T ss_pred chhhccc--------CcccccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecC
Confidence 9999863 22234456778999999999544 588999999999999999999999874
No 408
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.94 E-value=1.6e-28 Score=246.86 Aligned_cols=302 Identities=20% Similarity=0.216 Sum_probs=210.5
Q ss_pred cCCCCcccccccccccccccccCcccccceEEEEeC-CCchhhhHHhHhhhhhHHHHHHHHHHHHhcCC------CCcee
Q 005045 376 QSGMSYSDISKSTDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQQGALKSFIDECNALKSTR------HRNIL 448 (717)
Q Consensus 376 ~~~~s~~~~~~~~~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~------h~ni~ 448 (717)
.++|.+.-....-++|.+....|+|-||.|..|.+. .|..||||++...... .+.-..|+++|+++. .-+.+
T Consensus 419 EGYYrv~igE~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M-~KtGl~EleiLkKL~~AD~Edk~Hcl 497 (752)
T KOG0670|consen 419 EGYYRVRIGELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVM-HKTGLKELEILKKLNDADPEDKFHCL 497 (752)
T ss_pred cceEEEehhhhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHH-hhhhhHHHHHHHHhhccCchhhhHHH
Confidence 456666666667889999999999999999999965 6889999999755322 244567999999984 23567
Q ss_pred EEEEeeccccCCCCceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCC
Q 005045 449 RVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKP 528 (717)
Q Consensus 449 ~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp 528 (717)
+++.. |....++|+|||.+ ..+|.++++..+.. -.+....+..++.|+.-||..|-.. ||+|.||||
T Consensus 498 rl~r~-----F~hknHLClVFE~L-slNLRevLKKyG~n----vGL~ikaVRsYaqQLflALklLK~c---~vlHaDIKP 564 (752)
T KOG0670|consen 498 RLFRH-----FKHKNHLCLVFEPL-SLNLREVLKKYGRN----VGLHIKAVRSYAQQLFLALKLLKKC---GVLHADIKP 564 (752)
T ss_pred HHHHH-----hhhcceeEEEehhh-hchHHHHHHHhCcc----cceeehHHHHHHHHHHHHHHHHHhc---CeeecccCc
Confidence 76666 55667999999998 58999999876432 4477888999999999999999997 999999999
Q ss_pred CCEEeCCC-CceEEeeeccchhcccccCCCCCCcceeecccccccccCCCccCCC-CCcccchhhHHHHHHHHHhCCCCC
Q 005045 529 SNVLLDKD-MTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNGQ-VSILGDIYSYGILLLEMFTGKRPT 606 (717)
Q Consensus 529 ~NIll~~~-~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~sDvwslG~vl~elltg~~p~ 606 (717)
+||+|++. ..+||||||.|....+ ...+++.-+..|.|||++-|. |++..|+||+||+||||.||+..|
T Consensus 565 DNiLVNE~k~iLKLCDfGSA~~~~e---------neitPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlF 635 (752)
T KOG0670|consen 565 DNILVNESKNILKLCDFGSASFASE---------NEITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILF 635 (752)
T ss_pred cceEeccCcceeeeccCcccccccc---------ccccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceec
Confidence 99999865 4799999999987622 122345566789999998774 899999999999999999999999
Q ss_pred CCCCCCch-hhhHHHHhcCChh-------hhhhcCCCCCCCCCCcHHH--------HHHHHHHHHHHhhhhhhhcchhhh
Q 005045 607 GDMFKDDF-SIHMFVSMALPDH-------VMDILDPSMPLDEENDEEQ--------IEEVIEEKEMMIHIDLEVNTKNKL 670 (717)
Q Consensus 607 ~~~~~~~~-~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~ 670 (717)
.+...... .+...+...+|.. ..+-+|..+...+..-... +.-+.........+...++..+..
T Consensus 636 pG~TNN~MLrl~me~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq 715 (752)
T KOG0670|consen 636 PGRTNNQMLRLFMELKGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQ 715 (752)
T ss_pred CCCCcHHHHHHHHHhcCCCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchh
Confidence 87543322 1222222334433 1222333222111100000 000000000011111111122233
Q ss_pred HHHHHHHHHHhhccCCCCcCCCCCHHHHHH
Q 005045 671 EECFVSVLRIGLMCSTTSPRERIAMNVVVN 700 (717)
Q Consensus 671 ~~~~~~l~~li~~cl~~~p~~Rps~~eil~ 700 (717)
....++|.+|+.+|+..||++|.|..+.++
T Consensus 716 ~~~~~~~rdLLdkml~LdP~KRit~nqAL~ 745 (752)
T KOG0670|consen 716 PKIVQQLRDLLDKMLILDPEKRITVNQALK 745 (752)
T ss_pred HHHHHHHHHHHHHHhccChhhcCCHHHHhc
Confidence 444678899999999999999999999875
No 409
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.94 E-value=9.6e-28 Score=237.54 Aligned_cols=296 Identities=21% Similarity=0.269 Sum_probs=209.3
Q ss_pred ccccccccccccccCcccccceEEEEeC----CCchhhhHHhHhhhhhHHHHHHHHHHHHhcC-CCCceeEEEEeecccc
Q 005045 384 ISKSTDNFSKENLIGTGSFGSVYKGTLG----DGTIVAIKVLKLQQQGALKSFIDECNALKST-RHRNILRVITACSSVD 458 (717)
Q Consensus 384 ~~~~~~~y~~~~~ig~g~~g~v~~~~~~----~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~~ 458 (717)
+....+.|.++++||.|.|++||++.+. .++.||+|.+.... ...+..+|++.+..+ .+.||+++.++
T Consensus 31 ~p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts--~p~ri~~El~~L~~~gG~~ni~~~~~~----- 103 (418)
T KOG1167|consen 31 IPFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS--SPSRILNELEMLYRLGGSDNIIKLNGC----- 103 (418)
T ss_pred hhhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeeccccc--CchHHHHHHHHHHHhccchhhhcchhh-----
Confidence 4455678999999999999999999843 57789999887554 236788999999999 68899999988
Q ss_pred CCCCceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeC-CCC
Q 005045 459 LEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLD-KDM 537 (717)
Q Consensus 459 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~-~~~ 537 (717)
+...++.++|+||++.....++.. .++...++.+++.+..||+++|++ |||||||||+|++.+ ..+
T Consensus 104 ~rnnd~v~ivlp~~~H~~f~~l~~----------~l~~~~i~~Yl~~ll~Al~~~h~~---GIvHRDiKpsNFL~n~~t~ 170 (418)
T KOG1167|consen 104 FRNNDQVAIVLPYFEHDRFRDLYR----------SLSLAEIRWYLRNLLKALAHLHKN---GIVHRDIKPSNFLYNRRTQ 170 (418)
T ss_pred hccCCeeEEEecccCccCHHHHHh----------cCCHHHHHHHHHHHHHHhhhhhcc---CccccCCCccccccccccC
Confidence 667789999999999999998874 467888999999999999999998 999999999999998 567
Q ss_pred ceEEeeeccchhccccc------C----CCC---------------------------CCcceeecccccccccCCCccC
Q 005045 538 TAHVGDFGLAKFLFEIS------D----NPS---------------------------KNQTVSIGLKGSIGYIPPEHMN 580 (717)
Q Consensus 538 ~~kl~Dfg~~~~~~~~~------~----~~~---------------------------~~~~~~~~~~~~~~y~aPE~~~ 580 (717)
.-.|+|||+|....... . +.. ......-..+||++|+|||++.
T Consensus 171 rg~LvDFgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~ 250 (418)
T KOG1167|consen 171 RGVLVDFGLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLF 250 (418)
T ss_pred CceEEechhHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHh
Confidence 88999999998321111 0 000 0001112356999999999965
Q ss_pred CC--CCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHHHhcCChhhhh---hcCCCCCCCCCCcHHHHHHHHHHHH
Q 005045 581 GQ--VSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVSMALPDHVMD---ILDPSMPLDEENDEEQIEEVIEEKE 655 (717)
Q Consensus 581 ~~--~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 655 (717)
+. -+.++||||.||++..++++..||.....+-..+.+.+..--+..+.+ ..+..+-... .....+.+.....+
T Consensus 251 k~~~QttaiDiws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~k-sn~~~~~e~~~~f~ 329 (418)
T KOG1167|consen 251 RCPRQTTAIDIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQK-SNIPTIPELRVNFE 329 (418)
T ss_pred hccCcCCccceeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeecc-ccccccHHHHhchh
Confidence 53 588999999999999999999999887666655555554433333222 1121001110 11111122111111
Q ss_pred HH-----hhhhhh-hcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHH
Q 005045 656 MM-----IHIDLE-VNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVN 700 (717)
Q Consensus 656 ~~-----~~~~~~-~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~ 700 (717)
.. ...+.. ....+..+-.+..+.+++.+|+..+|.+|.||+|.+.
T Consensus 330 s~~~~~~~~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALk 380 (418)
T KOG1167|consen 330 TLHIESIYKSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALK 380 (418)
T ss_pred ccChhhcccccccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhc
Confidence 11 011111 1111222333447899999999999999999999884
No 410
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.94 E-value=5.3e-28 Score=250.33 Aligned_cols=254 Identities=23% Similarity=0.347 Sum_probs=204.3
Q ss_pred ccccccccccccCcccccceEEEEeC-CCchhhhHHhHhhhhhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCce
Q 005045 386 KSTDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDF 464 (717)
Q Consensus 386 ~~~~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 464 (717)
.+.++|..+..+|.|.+|.||+|+++ +++..|+|+++........-.+.|+-+++.++||||+.+++.+ -..+.
T Consensus 12 nP~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsy-----lr~dk 86 (829)
T KOG0576|consen 12 NPQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSY-----LRRDK 86 (829)
T ss_pred CCccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhh-----hhhcC
Confidence 45779999999999999999999966 8999999999977655667778899999999999999999984 45568
Q ss_pred EEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeee
Q 005045 465 KALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDF 544 (717)
Q Consensus 465 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Df 544 (717)
.|+.||||.||+|.+..+.. ..+++.++..+.+..++|++|||+. |-+|||||-.||+++..|.+|++||
T Consensus 87 lwicMEycgggslQdiy~~T-------gplselqiayvcRetl~gl~ylhs~---gk~hRdiKGanilltd~gDvklaDf 156 (829)
T KOG0576|consen 87 LWICMEYCGGGSLQDIYHVT-------GPLSELQIAYVCRETLQGLKYLHSQ---GKIHRDIKGANILLTDEGDVKLADF 156 (829)
T ss_pred cEEEEEecCCCcccceeeec-------ccchhHHHHHHHhhhhccchhhhcC---CcccccccccceeecccCceeeccc
Confidence 99999999999999988755 6789999999999999999999998 8899999999999999999999999
Q ss_pred ccchhcccccCCCCCCcceeecccccccccCCCcc----CCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHH
Q 005045 545 GLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHM----NGQVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFV 620 (717)
Q Consensus 545 g~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~----~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~ 620 (717)
|.+..+ ...-..+..++||+.|||||+. .|.|...+||||+|++.-|+---+.|..+..+-...+....
T Consensus 157 gvsaqi-------tati~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~LmTk 229 (829)
T KOG0576|consen 157 GVSAQI-------TATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLMTK 229 (829)
T ss_pred Cchhhh-------hhhhhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHHhhc
Confidence 998766 3344556678999999999993 45689999999999999999887777544322211111111
Q ss_pred HhcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHH
Q 005045 621 SMALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVN 700 (717)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~ 700 (717)
+. .++--..+. ..-...|-+|++.|+..+|.+|||+..+++
T Consensus 230 S~---------~qpp~lkDk------------------------------~kws~~fh~fvK~altknpKkRptaeklL~ 270 (829)
T KOG0576|consen 230 SG---------FQPPTLKDK------------------------------TKWSEFFHNFVKGALTKNPKKRPTAEKLLQ 270 (829)
T ss_pred cC---------CCCCcccCC------------------------------ccchHHHHHHHHHHhcCCCccCCChhhhee
Confidence 11 111111110 111456788999999999999999998775
No 411
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.94 E-value=2.7e-27 Score=219.94 Aligned_cols=211 Identities=22% Similarity=0.317 Sum_probs=170.8
Q ss_pred ccccccccccccCcccccceEEEEeC-CCchhhhHHhHhhhhhHHHHHHHHHHHHhcC-CCCceeEEEEeeccccCCCCc
Q 005045 386 KSTDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQQGALKSFIDECNALKST-RHRNILRVITACSSVDLEGND 463 (717)
Q Consensus 386 ~~~~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~~~~~~~ 463 (717)
...+.|.+.+.+|+|-||.+-++.++ +.+.+++|.++.... ..+.|.+|...--.+ .|.||+..|+.. ++..+
T Consensus 21 ~l~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~t-t~~dF~rEfhY~~~Ls~H~hIi~tY~va----Fqt~d 95 (378)
T KOG1345|consen 21 DLEDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQT-TQADFVREFHYSFFLSPHQHIIDTYEVA----FQTSD 95 (378)
T ss_pred chhhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchh-hHHHHHHHhccceeeccchhhhHHHHHH----hhcCc
Confidence 35778999999999999999999966 788899998875533 357788888765556 689999998886 55567
Q ss_pred eEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeC-C-CCceEE
Q 005045 464 FKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLD-K-DMTAHV 541 (717)
Q Consensus 464 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~-~-~~~~kl 541 (717)
.+++++||+|.|+|..-+... .+.+....+++.|+++|+.|+|+. .+||||||.+||+|- . ..++|+
T Consensus 96 ~YvF~qE~aP~gdL~snv~~~--------GigE~~~K~v~~ql~SAi~fMHsk---nlVHRdlK~eNiLif~~df~rvKl 164 (378)
T KOG1345|consen 96 AYVFVQEFAPRGDLRSNVEAA--------GIGEANTKKVFAQLLSAIEFMHSK---NLVHRDLKAENILIFDADFYRVKL 164 (378)
T ss_pred eEEEeeccCccchhhhhcCcc--------cccHHHHHHHHHHHHHHHHHhhcc---chhhcccccceEEEecCCccEEEe
Confidence 899999999999999888653 478888999999999999999997 999999999999994 3 348999
Q ss_pred eeeccchhcccccCCCCCCcceeecccccccccCCCcc----CCC--CCcccchhhHHHHHHHHHhCCCCCCCCCCCchh
Q 005045 542 GDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHM----NGQ--VSILGDIYSYGILLLEMFTGKRPTGDMFKDDFS 615 (717)
Q Consensus 542 ~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~----~~~--~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~ 615 (717)
+|||.++...- .......+-.|.+||+. .++ ..+.+|+|.||+++|.++||..||......+..
T Consensus 165 cDFG~t~k~g~----------tV~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~ 234 (378)
T KOG1345|consen 165 CDFGLTRKVGT----------TVKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKP 234 (378)
T ss_pred eecccccccCc----------eehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCch
Confidence 99999886411 11122345679999983 233 578999999999999999999999987777776
Q ss_pred hhHHHHh
Q 005045 616 IHMFVSM 622 (717)
Q Consensus 616 ~~~~~~~ 622 (717)
+.+|...
T Consensus 235 Y~~~~~w 241 (378)
T KOG1345|consen 235 YWEWEQW 241 (378)
T ss_pred HHHHHHH
Confidence 6666543
No 412
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.94 E-value=1.8e-28 Score=239.29 Aligned_cols=304 Identities=20% Similarity=0.195 Sum_probs=175.9
Q ss_pred EEccCccccccCCccccCCCCCCEEeccCCcCcccCChhhhccCCCCeEeccCCCCCCCCCccccCCCCccEEEccc-Cc
Q 005045 63 IGLGGSNLTGNVPAWIGNFSSLKALSLAWNNLRGSIPNELGQLSGLGFFTLYGNFISGIIPSSIYNISSIYYFSVTQ-NQ 141 (717)
Q Consensus 63 L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~-N~ 141 (717)
.+.++-.++ .+|..+. ..-..++|..|+|+.+.+.+|..+++|+.||||+|+|+.+.|++|.++.+|..|-+-+ |+
T Consensus 51 VdCr~~GL~-eVP~~LP--~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~Nk 127 (498)
T KOG4237|consen 51 VDCRGKGLT-EVPANLP--PETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNK 127 (498)
T ss_pred EEccCCCcc-cCcccCC--CcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCc
Confidence 344444444 3443333 2334444444444444444444444444444444444444444444444444433333 44
Q ss_pred ccccCCcccccCCCCcceeecccccccccCCccCCCCCCCCEEeccCccccccCCCCccCCCCCCeeeccccccCC-ccc
Q 005045 142 LHGQLPTDVGLTLPNLKIFAGAVNYFTGSIPVSLSNASNLQVLDFAENGLTGTIPGNFGSLKDLVRLNFDQNELGS-REI 220 (717)
Q Consensus 142 l~~~l~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~-~~~ 220 (717)
|+ .+|.+.|.++..|+.|.+.-|++.....+.|..+++|..|.+-+|.+..+--..|..+..++.+.+..|.+.. -..
T Consensus 128 I~-~l~k~~F~gL~slqrLllNan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~icdCnL 206 (498)
T KOG4237|consen 128 IT-DLPKGAFGGLSSLQRLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFICDCNL 206 (498)
T ss_pred hh-hhhhhHhhhHHHHHHHhcChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCcccccccc
Confidence 44 4444444444444444444444444444444444444444444444442222244444444444444443110 000
Q ss_pred -----CchhhhhhhccCCCCCEEEeecCcccCcCchhhhhccccccEEecCCCccCCCCC-ccccCCCCCCEEEccCCcC
Q 005045 221 -----GDLNFLKFLANCTSLEVLGLARNSFGGEMPISIANLSTHLRRLTMGENLMHGNIP-VGIGNLVNLNLLGLEGNNL 294 (717)
Q Consensus 221 -----~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~L~~L~l~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l 294 (717)
-....+..++.........+.++++...-+..+......+..=-.+.+...++.| ..|..+++|+.|+|++|+|
T Consensus 207 ~wla~~~a~~~ietsgarc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i 286 (498)
T KOG4237|consen 207 PWLADDLAMNPIETSGARCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKI 286 (498)
T ss_pred chhhhHHhhchhhcccceecchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCcc
Confidence 0000122344444455555555555533333333322222222223333333444 4589999999999999999
Q ss_pred ccccchhhhcCCCCCeEEcccCcCCCCCCcccccccccceeecccccccccCCcCccCcCCCceEEeecccCCCCC
Q 005045 295 SGSVPEVIGRLNKLEGLGLNVNKFSGLIPSSLGNLTILTRLWMEENRLEGSIPPSLGNCQKLLVLNLSSNDLNGTI 370 (717)
Q Consensus 295 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~ 370 (717)
+.+-+.+|.++..+++|.|..|+|..+....|.++..|+.|+|++|+|+...|.+|..+.+|.+|+|-.||+...+
T Consensus 287 ~~i~~~aFe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~CnC 362 (498)
T KOG4237|consen 287 TRIEDGAFEGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPFNCNC 362 (498)
T ss_pred chhhhhhhcchhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCcccCcc
Confidence 9999999999999999999999999888889999999999999999999999999999999999999999997654
No 413
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.93 E-value=4.8e-25 Score=264.41 Aligned_cols=338 Identities=20% Similarity=0.217 Sum_probs=251.8
Q ss_pred ceecEEEcCCCc------CcCCCCcCCcCCC-CCCEEECCCCcccccCCcCCCCCCCCCEEEccCccccccCCccccCCC
Q 005045 10 LMTQDLNLTYNY------LSGKIPTNLSHCT-ELRSFEASVNDFVGQIPNQLSSLTKLEIIGLGGSNLTGNVPAWIGNFS 82 (717)
Q Consensus 10 ~~~~~L~L~~n~------l~~~~~~~~~~l~-~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~ 82 (717)
.+++.|.+.++. +...+|..|..++ +|+.|++.++.++ .+|..| ...+|+.|+|++|++. .++..+..++
T Consensus 558 ~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~-~lP~~f-~~~~L~~L~L~~s~l~-~L~~~~~~l~ 634 (1153)
T PLN03210 558 RNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLR-CMPSNF-RPENLVKLQMQGSKLE-KLWDGVHSLT 634 (1153)
T ss_pred ccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCC-CCCCcC-CccCCcEEECcCcccc-ccccccccCC
Confidence 366777775543 3334677777765 4888888888887 777766 4688889999998888 6777788888
Q ss_pred CCCEEeccCCcCcccCChhhhccCCCCeEeccCCCCCCCCCccccCCCCccEEEcccCcccccCCcccccCCCCcceeec
Q 005045 83 SLKALSLAWNNLRGSIPNELGQLSGLGFFTLYGNFISGIIPSSIYNISSIYYFSVTQNQLHGQLPTDVGLTLPNLKIFAG 162 (717)
Q Consensus 83 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~l~~~~~~~l~~L~~L~l 162 (717)
+|+.|+|++|.....+|+ +..+++|++|+|++|.....+|..+.++++|+.|++++|...+.+|... .+++|+.|++
T Consensus 635 ~Lk~L~Ls~~~~l~~ip~-ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i--~l~sL~~L~L 711 (1153)
T PLN03210 635 GLRNIDLRGSKNLKEIPD-LSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGI--NLKSLYRLNL 711 (1153)
T ss_pred CCCEEECCCCCCcCcCCc-cccCCcccEEEecCCCCccccchhhhccCCCCEEeCCCCCCcCccCCcC--CCCCCCEEeC
Confidence 899999988764436664 7788889999998887666788888888999999998865434777765 6888899999
Q ss_pred ccccccccCCccCCCCCCCCEEeccCccccccCCCCccCCCCCCeeeccccccCCcccCchhh-hhhhccCCCCCEEEee
Q 005045 163 AVNYFTGSIPVSLSNASNLQVLDFAENGLTGTIPGNFGSLKDLVRLNFDQNELGSREIGDLNF-LKFLANCTSLEVLGLA 241 (717)
Q Consensus 163 ~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~-~~~~~~l~~L~~L~L~ 241 (717)
++|......|.. ..+|++|++++|.++ .+|..+ .+++|+.|.+.++....+....... +..+...++|+.|+|+
T Consensus 712 sgc~~L~~~p~~---~~nL~~L~L~~n~i~-~lP~~~-~l~~L~~L~l~~~~~~~l~~~~~~l~~~~~~~~~sL~~L~Ls 786 (1153)
T PLN03210 712 SGCSRLKSFPDI---STNISWLDLDETAIE-EFPSNL-RLENLDELILCEMKSEKLWERVQPLTPLMTMLSPSLTRLFLS 786 (1153)
T ss_pred CCCCCccccccc---cCCcCeeecCCCccc-cccccc-cccccccccccccchhhccccccccchhhhhccccchheeCC
Confidence 888655555543 357888899998887 566554 5778888888764332211000000 1123345789999999
Q ss_pred cCcccCcCchhhhhccccccEEecCCCccCCCCCccccCCCCCCEEEccCCcCccccchhhhcCCCCCeEEcccCcCCCC
Q 005045 242 RNSFGGEMPISIANLSTHLRRLTMGENLMHGNIPVGIGNLVNLNLLGLEGNNLSGSVPEVIGRLNKLEGLGLNVNKFSGL 321 (717)
Q Consensus 242 ~N~l~~~~p~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 321 (717)
+|...+.+|..+..+ ++|+.|++++|...+.+|..+ ++++|+.|+|++|.....+|.. ..+|+.|+|++|.++ .
T Consensus 787 ~n~~l~~lP~si~~L-~~L~~L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls~c~~L~~~p~~---~~nL~~L~Ls~n~i~-~ 860 (1153)
T PLN03210 787 DIPSLVELPSSIQNL-HKLEHLEIENCINLETLPTGI-NLESLESLDLSGCSRLRTFPDI---STNISDLNLSRTGIE-E 860 (1153)
T ss_pred CCCCccccChhhhCC-CCCCEEECCCCCCcCeeCCCC-CccccCEEECCCCCcccccccc---ccccCEeECCCCCCc-c
Confidence 998777889988887 589999999876444667665 6889999999998655456543 367899999999998 4
Q ss_pred CCcccccccccceeeccccc-ccccCCcCccCcCCCceEEeeccc
Q 005045 322 IPSSLGNLTILTRLWMEENR-LEGSIPPSLGNCQKLLVLNLSSND 365 (717)
Q Consensus 322 ~~~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~l~~N~ 365 (717)
+|..+..+++|++|+|++|+ +. .+|..+..+++|+.+++++|.
T Consensus 861 iP~si~~l~~L~~L~L~~C~~L~-~l~~~~~~L~~L~~L~l~~C~ 904 (1153)
T PLN03210 861 VPWWIEKFSNLSFLDMNGCNNLQ-RVSLNISKLKHLETVDFSDCG 904 (1153)
T ss_pred ChHHHhcCCCCCEEECCCCCCcC-ccCcccccccCCCeeecCCCc
Confidence 57888999999999999854 55 688888889999999998885
No 414
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.93 E-value=1.1e-25 Score=219.87 Aligned_cols=209 Identities=31% Similarity=0.505 Sum_probs=175.7
Q ss_pred cCcccccceEEEEeC-CCchhhhHHhHhhhhh-HHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceEEEEEecCCC
Q 005045 397 IGTGSFGSVYKGTLG-DGTIVAIKVLKLQQQG-ALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSN 474 (717)
Q Consensus 397 ig~g~~g~v~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~lv~e~~~~ 474 (717)
||+|++|.||++... +++.+++|++...... ....+.+|++.++.+.|++++++++.+. .....+++||++++
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~-----~~~~~~~~~e~~~~ 75 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFE-----DENHLYLVMEYCEG 75 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeee-----cCCeEEEEEecCCC
Confidence 689999999999965 5899999998865432 3577899999999999999999999954 33588999999998
Q ss_pred CChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCC-CCceEEeeeccchhcccc
Q 005045 475 GNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDK-DMTAHVGDFGLAKFLFEI 553 (717)
Q Consensus 475 ~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~-~~~~kl~Dfg~~~~~~~~ 553 (717)
++|.+++.... ..++...+..++.++++++++||+. +++|+||+|.||+++. ++.++|+|||.+......
T Consensus 76 ~~l~~~~~~~~------~~~~~~~~~~~~~~l~~~l~~lh~~---~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~ 146 (215)
T cd00180 76 GSLKDLLKENE------GKLSEDEILRILLQILEGLEYLHSN---GIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSD 146 (215)
T ss_pred CcHHHHHHhcc------CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHhhEEEeCCCCcEEEecCCceEEccCC
Confidence 99999987542 3578999999999999999999998 9999999999999998 899999999998765211
Q ss_pred cCCCCCCcceeecccccccccCCCccCC--CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHHHhcCChhhhhh
Q 005045 554 SDNPSKNQTVSIGLKGSIGYIPPEHMNG--QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVSMALPDHVMDI 631 (717)
Q Consensus 554 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 631 (717)
.. ......+...|++||...+ .++.++|+|++|+++|++
T Consensus 147 ~~-------~~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l-------------------------------- 187 (215)
T cd00180 147 KS-------LLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL-------------------------------- 187 (215)
T ss_pred cc-------hhhcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH--------------------------------
Confidence 10 1222447788999999655 678999999999999999
Q ss_pred cCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHHH
Q 005045 632 LDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVNN 701 (717)
Q Consensus 632 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~~ 701 (717)
..+.+++.+|++.+|++||++.++++.
T Consensus 188 -------------------------------------------~~~~~~l~~~l~~~p~~R~~~~~l~~~ 214 (215)
T cd00180 188 -------------------------------------------PELKDLIRKMLQKDPEKRPSAKEILEH 214 (215)
T ss_pred -------------------------------------------HHHHHHHHHHhhCCcccCcCHHHHhhC
Confidence 125678999999999999999999864
No 415
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.93 E-value=1.3e-25 Score=249.66 Aligned_cols=264 Identities=25% Similarity=0.331 Sum_probs=170.9
Q ss_pred CCCEEEccCccccccCCccccCCCCCCEEeccCCcCcccCChhhhccCCCCeEeccCCCCCCCCCccccCCCCccEEEcc
Q 005045 59 KLEIIGLGGSNLTGNVPAWIGNFSSLKALSLAWNNLRGSIPNELGQLSGLGFFTLYGNFISGIIPSSIYNISSIYYFSVT 138 (717)
Q Consensus 59 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~ 138 (717)
+-..|+|++|.++ .+|..+. .+|+.|++++|+|+ .+|. ..++|++|+|++|+|+.+ |.. .++|+.|+|+
T Consensus 202 ~~~~LdLs~~~Lt-sLP~~l~--~~L~~L~L~~N~Lt-~LP~---lp~~Lk~LdLs~N~LtsL-P~l---p~sL~~L~Ls 270 (788)
T PRK15387 202 GNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLTSL-PVL---PPGLLELSIF 270 (788)
T ss_pred CCcEEEcCCCCCC-cCCcchh--cCCCEEEccCCcCC-CCCC---CCCCCcEEEecCCccCcc-cCc---ccccceeecc
Confidence 3456666666666 5555554 35666666666666 3443 235666666666666633 322 3456666777
Q ss_pred cCcccccCCcccccCCCCcceeecccccccccCCccCCCCCCCCEEeccCccccccCCCCccCCCCCCeeeccccccCCc
Q 005045 139 QNQLHGQLPTDVGLTLPNLKIFAGAVNYFTGSIPVSLSNASNLQVLDFAENGLTGTIPGNFGSLKDLVRLNFDQNELGSR 218 (717)
Q Consensus 139 ~N~l~~~l~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~ 218 (717)
+|.++ .+|. ...+|+.|++++|.++. +|. .+++|+.|+|++|++++ +|.. ..+|+.|++++|.|+.+
T Consensus 271 ~N~L~-~Lp~----lp~~L~~L~Ls~N~Lt~-LP~---~p~~L~~LdLS~N~L~~-Lp~l---p~~L~~L~Ls~N~L~~L 337 (788)
T PRK15387 271 SNPLT-HLPA----LPSGLCKLWIFGNQLTS-LPV---LPPGLQELSVSDNQLAS-LPAL---PSELCKLWAYNNQLTSL 337 (788)
T ss_pred CCchh-hhhh----chhhcCEEECcCCcccc-ccc---cccccceeECCCCcccc-CCCC---cccccccccccCccccc
Confidence 77665 5553 22456666777776663 333 23567777777777773 4432 23566777777777765
Q ss_pred ccCchhhhhhhccCCCCCEEEeecCcccCcCchhhhhccccccEEecCCCccCCCCCccccCCCCCCEEEccCCcCcccc
Q 005045 219 EIGDLNFLKFLANCTSLEVLGLARNSFGGEMPISIANLSTHLRRLTMGENLMHGNIPVGIGNLVNLNLLGLEGNNLSGSV 298 (717)
Q Consensus 219 ~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 298 (717)
+. -..+|+.|+|++|+|+ .+|.. +.+|+.|++++|.|.. +|.. ..+|+.|+|++|+|+ .+
T Consensus 338 P~----------lp~~Lq~LdLS~N~Ls-~LP~l----p~~L~~L~Ls~N~L~~-LP~l---~~~L~~LdLs~N~Lt-~L 397 (788)
T PRK15387 338 PT----------LPSGLQELSVSDNQLA-SLPTL----PSELYKLWAYNNRLTS-LPAL---PSGLKELIVSGNRLT-SL 397 (788)
T ss_pred cc----------cccccceEecCCCccC-CCCCC----Ccccceehhhcccccc-Cccc---ccccceEEecCCccc-CC
Confidence 41 1146778888888887 55542 2467778888888773 4543 246788888888887 45
Q ss_pred chhhhcCCCCCeEEcccCcCCCCCCcccccccccceeecccccccccCCcCccCcCCCceEEeecccCCCCCCccc
Q 005045 299 PEVIGRLNKLEGLGLNVNKFSGLIPSSLGNLTILTRLWMEENRLEGSIPPSLGNCQKLLVLNLSSNDLNGTIPKEV 374 (717)
Q Consensus 299 ~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~ 374 (717)
|.. .++|+.|++++|+++++ |..+ .+|+.|+|++|+|+ .+|..+..+++|+.|+|++|+|++.+|..+
T Consensus 398 P~l---~s~L~~LdLS~N~LssI-P~l~---~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs~N~Ls~~~~~~L 465 (788)
T PRK15387 398 PVL---PSELKELMVSGNRLTSL-PMLP---SGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQAL 465 (788)
T ss_pred CCc---ccCCCEEEccCCcCCCC-Ccch---hhhhhhhhccCccc-ccChHHhhccCCCeEECCCCCCCchHHHHH
Confidence 543 35688888888888754 4332 46778888888887 778888888888888888888887777654
No 416
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.93 E-value=2.1e-25 Score=247.82 Aligned_cols=258 Identities=25% Similarity=0.338 Sum_probs=145.7
Q ss_pred ecEEEcCCCcCcCCCCcCCcCCCCCCEEECCCCcccccCCcCCCCCCCCCEEEccCccccccCCccccCCCCCCEEeccC
Q 005045 12 TQDLNLTYNYLSGKIPTNLSHCTELRSFEASVNDFVGQIPNQLSSLTKLEIIGLGGSNLTGNVPAWIGNFSSLKALSLAW 91 (717)
Q Consensus 12 ~~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~ 91 (717)
...|+|++|+|+ .+|+.+. ++|+.|++++|+++ .+|. .+++|++|+|++|+|+ .+|.. .++|+.|+|++
T Consensus 203 ~~~LdLs~~~Lt-sLP~~l~--~~L~~L~L~~N~Lt-~LP~---lp~~Lk~LdLs~N~Lt-sLP~l---p~sL~~L~Ls~ 271 (788)
T PRK15387 203 NAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLT-SLPVL---PPGLLELSIFS 271 (788)
T ss_pred CcEEEcCCCCCC-cCCcchh--cCCCEEEccCCcCC-CCCC---CCCCCcEEEecCCccC-cccCc---ccccceeeccC
Confidence 356788888887 5676665 47888888888887 5664 2467888888888887 55543 35677888888
Q ss_pred CcCcccCChhhhccCCCCeEeccCCCCCCCCCccccCCCCccEEEcccCcccccCCcccccCCCCcceeecccccccccC
Q 005045 92 NNLRGSIPNELGQLSGLGFFTLYGNFISGIIPSSIYNISSIYYFSVTQNQLHGQLPTDVGLTLPNLKIFAGAVNYFTGSI 171 (717)
Q Consensus 92 n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~l~~~~~~~l~~L~~L~l~~n~l~~~~ 171 (717)
|.|+ .+|..+ ++|+.|+|++|+++. +|. .+++|+.|+|++|+++ .+|. ..++|+.|++++|.++. +
T Consensus 272 N~L~-~Lp~lp---~~L~~L~Ls~N~Lt~-LP~---~p~~L~~LdLS~N~L~-~Lp~----lp~~L~~L~Ls~N~L~~-L 337 (788)
T PRK15387 272 NPLT-HLPALP---SGLCKLWIFGNQLTS-LPV---LPPGLQELSVSDNQLA-SLPA----LPSELCKLWAYNNQLTS-L 337 (788)
T ss_pred Cchh-hhhhch---hhcCEEECcCCcccc-ccc---cccccceeECCCCccc-cCCC----CcccccccccccCcccc-c
Confidence 8877 444432 457777788887774 343 2356777778777776 5554 12356666666666663 3
Q ss_pred CccCCCCCCCCEEeccCccccccCCCCccCCCCCCeeeccccccCCcccCchhhhhhhccCCCCCEEEeecCcccCcCch
Q 005045 172 PVSLSNASNLQVLDFAENGLTGTIPGNFGSLKDLVRLNFDQNELGSREIGDLNFLKFLANCTSLEVLGLARNSFGGEMPI 251 (717)
Q Consensus 172 ~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~ 251 (717)
|.. ..+|+.|+|++|+|+ .+|.. .++|+.|++++|+|+.++ . ...+|+.|+|++|.|+ .+|.
T Consensus 338 P~l---p~~Lq~LdLS~N~Ls-~LP~l---p~~L~~L~Ls~N~L~~LP-------~---l~~~L~~LdLs~N~Lt-~LP~ 399 (788)
T PRK15387 338 PTL---PSGLQELSVSDNQLA-SLPTL---PSELYKLWAYNNRLTSLP-------A---LPSGLKELIVSGNRLT-SLPV 399 (788)
T ss_pred ccc---ccccceEecCCCccC-CCCCC---CcccceehhhccccccCc-------c---cccccceEEecCCccc-CCCC
Confidence 321 135666666666666 34432 234555566666655443 1 1134555555555555 3332
Q ss_pred hhhhccccccEEecCCCccCCCCCccccCCCCCCEEEccCCcCccccchhhhcCCCCCeEEcccCcCCCC
Q 005045 252 SIANLSTHLRRLTMGENLMHGNIPVGIGNLVNLNLLGLEGNNLSGSVPEVIGRLNKLEGLGLNVNKFSGL 321 (717)
Q Consensus 252 ~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 321 (717)
. +++|+.|++++|.+++ +|.. ..+|+.|++++|+|+ .+|..+..+++|+.|+|++|+|++.
T Consensus 400 l----~s~L~~LdLS~N~Lss-IP~l---~~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs~N~Ls~~ 460 (788)
T PRK15387 400 L----PSELKELMVSGNRLTS-LPML---PSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSER 460 (788)
T ss_pred c----ccCCCEEEccCCcCCC-CCcc---hhhhhhhhhccCccc-ccChHHhhccCCCeEECCCCCCCch
Confidence 1 1244444444444442 2321 123444444444444 3444444444444444444444433
No 417
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.92 E-value=1e-24 Score=215.48 Aligned_cols=198 Identities=32% Similarity=0.507 Sum_probs=166.2
Q ss_pred cccccccCcccccceEEEEeC-CCchhhhHHhHhhhhh-HHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceEEEE
Q 005045 391 FSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQQG-ALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFKALV 468 (717)
Q Consensus 391 y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~lv 468 (717)
|.+.+.||.|++|.||++... +++.+++|.+...... ..+.+.+|++.+++++|+|++++++.+. .....+++
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~-----~~~~~~~v 75 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFE-----DPEPLYLV 75 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeee-----cCCceEEE
Confidence 567889999999999999966 5889999999865444 5678899999999999999999999853 34578999
Q ss_pred EecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeeccch
Q 005045 469 FEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAK 548 (717)
Q Consensus 469 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~ 548 (717)
+|++++++|.+++.... ..+++..+..++.+++.++.++|+. +++|+||+|+||+++.++.++|+|||.+.
T Consensus 76 ~e~~~~~~L~~~~~~~~------~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~di~~~ni~v~~~~~~~l~d~g~~~ 146 (225)
T smart00221 76 MEYCEGGDLFDYLRKKG------GKLSEEEARFYLRQILEALEYLHSL---GIVHRDLKPENILLGMDGLVKLADFGLAR 146 (225)
T ss_pred EeccCCCCHHHHHHhcc------cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeeCceee
Confidence 99999999999987542 1178899999999999999999998 99999999999999999999999999988
Q ss_pred hcccccCCCCCCcceeecccccccccCCCcc-CC-CCCcccchhhHHHHHHHHHhCCCCCCC
Q 005045 549 FLFEISDNPSKNQTVSIGLKGSIGYIPPEHM-NG-QVSILGDIYSYGILLLEMFTGKRPTGD 608 (717)
Q Consensus 549 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~-~~-~~~~~sDvwslG~vl~elltg~~p~~~ 608 (717)
...... ........++..|++||.. .+ .++.++||||||+++|+|++|+.||+.
T Consensus 147 ~~~~~~------~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 147 FIHRDL------AALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred EecCcc------cccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 652211 0012234577889999996 33 367899999999999999999999965
No 418
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.92 E-value=6.8e-24 Score=254.48 Aligned_cols=326 Identities=18% Similarity=0.204 Sum_probs=261.1
Q ss_pred CCCcCCcCCCCCCEEECCCCc------ccccCCcCCCCCC-CCCEEEccCccccccCCccccCCCCCCEEeccCCcCccc
Q 005045 25 KIPTNLSHCTELRSFEASVND------FVGQIPNQLSSLT-KLEIIGLGGSNLTGNVPAWIGNFSSLKALSLAWNNLRGS 97 (717)
Q Consensus 25 ~~~~~~~~l~~L~~L~L~~n~------l~~~~p~~~~~l~-~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ 97 (717)
..+.+|.++.+|+.|.+.++. +...+|..|..++ +|+.|.+.++.++ .+|..| ...+|+.|+|++|+|. .
T Consensus 549 i~~~aF~~m~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~-~lP~~f-~~~~L~~L~L~~s~l~-~ 625 (1153)
T PLN03210 549 IHENAFKGMRNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLR-CMPSNF-RPENLVKLQMQGSKLE-K 625 (1153)
T ss_pred ecHHHHhcCccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCC-CCCCcC-CccCCcEEECcCcccc-c
Confidence 456679999999999997653 3345777787764 6999999999998 788877 5789999999999998 7
Q ss_pred CChhhhccCCCCeEeccCCCCCCCCCccccCCCCccEEEcccCcccccCCcccccCCCCcceeecccccccccCCccCCC
Q 005045 98 IPNELGQLSGLGFFTLYGNFISGIIPSSIYNISSIYYFSVTQNQLHGQLPTDVGLTLPNLKIFAGAVNYFTGSIPVSLSN 177 (717)
Q Consensus 98 ~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~l~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~ 177 (717)
++..+..+++|+.|+|++|.....+| .++.+++|+.|+|++|.....+|..+. .+++|+.|++++|..-..+|..+ +
T Consensus 626 L~~~~~~l~~Lk~L~Ls~~~~l~~ip-~ls~l~~Le~L~L~~c~~L~~lp~si~-~L~~L~~L~L~~c~~L~~Lp~~i-~ 702 (1153)
T PLN03210 626 LWDGVHSLTGLRNIDLRGSKNLKEIP-DLSMATNLETLKLSDCSSLVELPSSIQ-YLNKLEDLDMSRCENLEILPTGI-N 702 (1153)
T ss_pred cccccccCCCCCEEECCCCCCcCcCC-ccccCCcccEEEecCCCCccccchhhh-ccCCCCEEeCCCCCCcCccCCcC-C
Confidence 78889999999999999886544566 488999999999999876558887764 89999999999976555677665 7
Q ss_pred CCCCCEEeccCccccccCCCCccCCCCCCeeeccccccCCcccCchhhhhhhccCCCCCEEEeecCcccC------cCch
Q 005045 178 ASNLQVLDFAENGLTGTIPGNFGSLKDLVRLNFDQNELGSREIGDLNFLKFLANCTSLEVLGLARNSFGG------EMPI 251 (717)
Q Consensus 178 l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~------~~p~ 251 (717)
+++|+.|++++|......|.. .++|+.|++++|.+..++ ..+ .+++|+.|++.++.... .++.
T Consensus 703 l~sL~~L~Lsgc~~L~~~p~~---~~nL~~L~L~~n~i~~lP-------~~~-~l~~L~~L~l~~~~~~~l~~~~~~l~~ 771 (1153)
T PLN03210 703 LKSLYRLNLSGCSRLKSFPDI---STNISWLDLDETAIEEFP-------SNL-RLENLDELILCEMKSEKLWERVQPLTP 771 (1153)
T ss_pred CCCCCEEeCCCCCCccccccc---cCCcCeeecCCCcccccc-------ccc-cccccccccccccchhhccccccccch
Confidence 899999999999765566643 468999999999998765 222 57888888888744320 1122
Q ss_pred hhhhccccccEEecCCCccCCCCCccccCCCCCCEEEccCCcCccccchhhhcCCCCCeEEcccCcCCCCCCcccccccc
Q 005045 252 SIANLSTHLRRLTMGENLMHGNIPVGIGNLVNLNLLGLEGNNLSGSVPEVIGRLNKLEGLGLNVNKFSGLIPSSLGNLTI 331 (717)
Q Consensus 252 ~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 331 (717)
.....+++|+.|++++|.....+|..++++++|+.|+|++|...+.+|..+ .+++|+.|+|++|......|.. ..+
T Consensus 772 ~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls~c~~L~~~p~~---~~n 847 (1153)
T PLN03210 772 LMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI-NLESLESLDLSGCSRLRTFPDI---STN 847 (1153)
T ss_pred hhhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC-CccccCEEECCCCCcccccccc---ccc
Confidence 223334689999999998777899999999999999999986544777765 7999999999998755555543 368
Q ss_pred cceeecccccccccCCcCccCcCCCceEEeecc-cCCCCCCcc
Q 005045 332 LTRLWMEENRLEGSIPPSLGNCQKLLVLNLSSN-DLNGTIPKE 373 (717)
Q Consensus 332 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N-~l~~~~p~~ 373 (717)
|+.|+|++|.++ .+|..+..+++|+.|++++| .+. .+|..
T Consensus 848 L~~L~Ls~n~i~-~iP~si~~l~~L~~L~L~~C~~L~-~l~~~ 888 (1153)
T PLN03210 848 ISDLNLSRTGIE-EVPWWIEKFSNLSFLDMNGCNNLQ-RVSLN 888 (1153)
T ss_pred cCEeECCCCCCc-cChHHHhcCCCCCEEECCCCCCcC-ccCcc
Confidence 999999999998 78999999999999999994 555 45554
No 419
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.91 E-value=7.3e-24 Score=200.87 Aligned_cols=169 Identities=21% Similarity=0.247 Sum_probs=123.7
Q ss_pred CChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeeccchhccccc
Q 005045 475 GNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEIS 554 (717)
Q Consensus 475 ~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~ 554 (717)
|+|.+++.... ..+++..++.++.||+.||+|||+. + ||+||+++.++.+|+ ||.+......
T Consensus 1 GsL~~~l~~~~------~~l~~~~~~~i~~qi~~~L~~lH~~---~------kp~Nil~~~~~~~~~--fG~~~~~~~~- 62 (176)
T smart00750 1 VSLADILEVRG------RPLNEEEIWAVCLQCLRALRELHRQ---A------KSGNILLTWDGLLKL--DGSVAFKTPE- 62 (176)
T ss_pred CcHHHHHHHhC------CCCCHHHHHHHHHHHHHHHHHHHhc---C------CcccEeEcCccceee--ccceEeeccc-
Confidence 68888887542 4689999999999999999999997 5 999999999999999 9998765210
Q ss_pred CCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHHHhcCChhhhhhcC
Q 005045 555 DNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVSMALPDHVMDILD 633 (717)
Q Consensus 555 ~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 633 (717)
...|++.|+|||++.+ .++.++|||||||++|||++|..||................. .
T Consensus 63 -----------~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~---------~ 122 (176)
T smart00750 63 -----------QSRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGM---------P 122 (176)
T ss_pred -----------cCCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHh---------c
Confidence 1247899999999755 589999999999999999999999865422111111111000 0
Q ss_pred CCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHH--HHHHHHhhccCCCCcCCCCCHHHHHHHHHHHHHH
Q 005045 634 PSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECF--VSVLRIGLMCSTTSPRERIAMNVVVNNLKTIRNC 708 (717)
Q Consensus 634 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~~li~~cl~~~p~~Rps~~eil~~l~~i~~~ 708 (717)
+...... ....... ..+.+++.+||+.+|++|||+.|+++.+..+..+
T Consensus 123 ~~~~~~~---------------------------~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~~~ 172 (176)
T smart00750 123 ADDPRDR---------------------------SNLESVSAARSFADFMRVCASRLPQRREAANHYLAHCRALFAE 172 (176)
T ss_pred cCCcccc---------------------------ccHHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHHHHH
Confidence 0000000 0011112 2588999999999999999999999999887654
No 420
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.90 E-value=5.7e-24 Score=247.92 Aligned_cols=153 Identities=16% Similarity=0.236 Sum_probs=105.9
Q ss_pred CceeEEEEeecccc--CCCCceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCee
Q 005045 445 RNILRVITACSSVD--LEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIA 522 (717)
Q Consensus 445 ~ni~~~~~~~~~~~--~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~iv 522 (717)
.||..+++.+.... ..+.+..+.+||++ +++|.+++.... ..+++.+++.++.||++||+|||++ ||+
T Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~~------~~~~~~~~~~i~~qi~~al~~lH~~---gIv 102 (793)
T PLN00181 33 DYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNPD------RSVDAFECFHVFRQIVEIVNAAHSQ---GIV 102 (793)
T ss_pred HHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhccc------ccccHHHHHHHHHHHHHHHHHHHhC---Cee
Confidence 35555555432111 12234577889987 679999997432 5689999999999999999999997 999
Q ss_pred ecCCCCCCEEeCCCCceEE-------------------eeeccchhcccccCC----C-----CCCcceeeccccccccc
Q 005045 523 HCDLKPSNVLLDKDMTAHV-------------------GDFGLAKFLFEISDN----P-----SKNQTVSIGLKGSIGYI 574 (717)
Q Consensus 523 H~dlkp~NIll~~~~~~kl-------------------~Dfg~~~~~~~~~~~----~-----~~~~~~~~~~~~~~~y~ 574 (717)
||||||+|||++..|.+|+ +|||.++........ . ...........||+.|+
T Consensus 103 HrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~ 182 (793)
T PLN00181 103 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYT 182 (793)
T ss_pred eccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceE
Confidence 9999999999976555554 455544322100000 0 00000011235788899
Q ss_pred CCCccCC-CCCcccchhhHHHHHHHHHhCCCCCC
Q 005045 575 PPEHMNG-QVSILGDIYSYGILLLEMFTGKRPTG 607 (717)
Q Consensus 575 aPE~~~~-~~~~~sDvwslG~vl~elltg~~p~~ 607 (717)
|||++.+ .++.++|||||||++|||++|..|+.
T Consensus 183 APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~ 216 (793)
T PLN00181 183 SPEEDNGSSSNCASDVYRLGVLLFELFCPVSSRE 216 (793)
T ss_pred ChhhhccCCCCchhhhhhHHHHHHHHhhCCCchh
Confidence 9999654 58999999999999999999888764
No 421
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.90 E-value=2e-23 Score=233.90 Aligned_cols=278 Identities=23% Similarity=0.426 Sum_probs=147.2
Q ss_pred eecEEEcCCCcCcCCCCcCCcCCCCCCEEECCCCcccccCCcCCCCCCCCCEEEccCccccccCCccccCCCCCCEEecc
Q 005045 11 MTQDLNLTYNYLSGKIPTNLSHCTELRSFEASVNDFVGQIPNQLSSLTKLEIIGLGGSNLTGNVPAWIGNFSSLKALSLA 90 (717)
Q Consensus 11 ~~~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~ 90 (717)
+.+.|+|++++++ .+|..+. ++|+.|+|++|+++ .+|..+. ++|+.|+|++|+++ .+|..+. .+|+.|+|+
T Consensus 179 ~~~~L~L~~~~Lt-sLP~~Ip--~~L~~L~Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~Ls 249 (754)
T PRK15370 179 NKTELRLKILGLT-TIPACIP--EQITTLILDNNELK-SLPENLQ--GNIKTLYANSNQLT-SIPATLP--DTIQEMELS 249 (754)
T ss_pred CceEEEeCCCCcC-cCCcccc--cCCcEEEecCCCCC-cCChhhc--cCCCEEECCCCccc-cCChhhh--ccccEEECc
Confidence 3456677777666 4555443 45667777777666 4554443 36666777766666 4555443 356666666
Q ss_pred CCcCcccCChhhhccCCCCeEeccCCCCCCCCCccccCCCCccEEEcccCcccccCCcccccCCCCcceeeccccccccc
Q 005045 91 WNNLRGSIPNELGQLSGLGFFTLYGNFISGIIPSSIYNISSIYYFSVTQNQLHGQLPTDVGLTLPNLKIFAGAVNYFTGS 170 (717)
Q Consensus 91 ~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~l~~~~~~~l~~L~~L~l~~n~l~~~ 170 (717)
+|+++ .+|..+. .+|+.|+|++|+|+. +|..+. ++|+.|+|++|+++ .+|..++ ++|+.|++++|.+..
T Consensus 250 ~N~L~-~LP~~l~--s~L~~L~Ls~N~L~~-LP~~l~--~sL~~L~Ls~N~Lt-~LP~~lp---~sL~~L~Ls~N~Lt~- 318 (754)
T PRK15370 250 INRIT-ELPERLP--SALQSLDLFHNKISC-LPENLP--EELRYLSVYDNSIR-TLPAHLP---SGITHLNVQSNSLTA- 318 (754)
T ss_pred CCccC-cCChhHh--CCCCEEECcCCccCc-cccccC--CCCcEEECCCCccc-cCcccch---hhHHHHHhcCCcccc-
Confidence 66666 4554443 356666666666663 444333 35666666666665 4544322 245555555555542
Q ss_pred CCccCCCCCCCCEEeccCccccccCCCCccCCCCCCeeeccccccCCcccCchhhhhhhccCCCCCEEEeecCcccCcCc
Q 005045 171 IPVSLSNASNLQVLDFAENGLTGTIPGNFGSLKDLVRLNFDQNELGSREIGDLNFLKFLANCTSLEVLGLARNSFGGEMP 250 (717)
Q Consensus 171 ~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p 250 (717)
+|..+. ++|++|++++|.++ .+|..+. ++|+.|++++|+|+ .+|
T Consensus 319 LP~~l~--~sL~~L~Ls~N~Lt-~LP~~l~--------------------------------~sL~~L~Ls~N~L~-~LP 362 (754)
T PRK15370 319 LPETLP--PGLKTLEAGENALT-SLPASLP--------------------------------PELQVLDVSKNQIT-VLP 362 (754)
T ss_pred CCcccc--ccceeccccCCccc-cCChhhc--------------------------------CcccEEECCCCCCC-cCC
Confidence 222221 34444555555444 2333221 35555555555555 444
Q ss_pred hhhhhccccccEEecCCCccCCCCCccccCCCCCCEEEccCCcCccccchh----hhcCCCCCeEEcccCcCCCCCCccc
Q 005045 251 ISIANLSTHLRRLTMGENLMHGNIPVGIGNLVNLNLLGLEGNNLSGSVPEV----IGRLNKLEGLGLNVNKFSGLIPSSL 326 (717)
Q Consensus 251 ~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~----~~~l~~L~~L~Ls~N~l~~~~~~~~ 326 (717)
..+. ++|+.|++++|.++ .+|..+. ..|+.|++++|+|+ .+|.. +..++.+..|+|.+|+++.
T Consensus 363 ~~lp---~~L~~LdLs~N~Lt-~LP~~l~--~sL~~LdLs~N~L~-~LP~sl~~~~~~~~~l~~L~L~~Npls~------ 429 (754)
T PRK15370 363 ETLP---PTITTLDVSRNALT-NLPENLP--AALQIMQASRNNLV-RLPESLPHFRGEGPQPTRIIVEYNPFSE------ 429 (754)
T ss_pred hhhc---CCcCEEECCCCcCC-CCCHhHH--HHHHHHhhccCCcc-cCchhHHHHhhcCCCccEEEeeCCCccH------
Confidence 4332 35666666666665 2343332 24666666666666 34433 3345677778888887762
Q ss_pred ccccccceeecccccccc-cCCcCccCcCCCce
Q 005045 327 GNLTILTRLWMEENRLEG-SIPPSLGNCQKLLV 358 (717)
Q Consensus 327 ~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~ 358 (717)
..+.+|+.| ++.+.+.| .++.....+.+++.
T Consensus 430 ~tl~~L~~L-l~s~~~~gp~i~~~~~~~~~l~~ 461 (754)
T PRK15370 430 RTIQNMQRL-MSSVGYQGPRVLFAMGDFSIVRV 461 (754)
T ss_pred HHHHHHHHh-hhcccccCCcccccccccccccc
Confidence 344445555 34444432 22333333444443
No 422
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.90 E-value=7.9e-24 Score=196.76 Aligned_cols=248 Identities=22% Similarity=0.372 Sum_probs=189.5
Q ss_pred ccccccccCcccccceEEEEeCCCchhhhHHhHhhh--hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceEEE
Q 005045 390 NFSKENLIGTGSFGSVYKGTLGDGTIVAIKVLKLQQ--QGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFKAL 467 (717)
Q Consensus 390 ~y~~~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~l 467 (717)
......++.....|..|+|+++ |..++.|++...+ ...-+.|..|.-.++.+.||||..+++.|.+. ..+.+
T Consensus 191 ~lnl~tkl~e~hsgelwrgrwq-gndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsp-----pnlv~ 264 (448)
T KOG0195|consen 191 SLNLITKLAESHSGELWRGRWQ-GNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSP-----PNLVI 264 (448)
T ss_pred hhhhhhhhccCCCccccccccc-CcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCC-----CCceE
Confidence 4456778999999999999996 5556778887654 23346789999999999999999999997554 48899
Q ss_pred EEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCee-ecCCCCCCEEeCCCCceEEe--ee
Q 005045 468 VFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIA-HCDLKPSNVLLDKDMTAHVG--DF 544 (717)
Q Consensus 468 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~iv-H~dlkp~NIll~~~~~~kl~--Df 544 (717)
+..|+|.|+|+..++.... -.++..++.+++.+|++|++|||+.. +++ .-.+++.+++||++.+++|+ |-
T Consensus 265 isq~mp~gslynvlhe~t~-----vvvd~sqav~faldiargmaflhsle--p~ipr~~lns~hvmidedltarismad~ 337 (448)
T KOG0195|consen 265 ISQYMPFGSLYNVLHEQTS-----VVVDHSQAVRFALDIARGMAFLHSLE--PMIPRFYLNSKHVMIDEDLTARISMADT 337 (448)
T ss_pred eeeeccchHHHHHHhcCcc-----EEEecchHHHHHHHHHhhHHHHhhcc--hhhhhhhcccceEEecchhhhheecccc
Confidence 9999999999999987642 55778889999999999999999974 444 44589999999999888874 32
Q ss_pred ccchhcccccCCCCCCcceeecccccccccCCCccCCCC----CcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHH
Q 005045 545 GLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNGQV----SILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFV 620 (717)
Q Consensus 545 g~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~----~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~ 620 (717)
..+ ....+..-.+.|++||.++.++ -.++|+|||++++||+-|...||.+..+-+....-.
T Consensus 338 kfs--------------fqe~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmkia- 402 (448)
T KOG0195|consen 338 KFS--------------FQEVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIA- 402 (448)
T ss_pred eee--------------eeccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhh-
Confidence 222 1223344577899999987653 467899999999999999999999876544322110
Q ss_pred HhcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHH
Q 005045 621 SMALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVN 700 (717)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~ 700 (717)
...+ ...+ ++-.+..+..++.-|+..||.+||.+..|+-
T Consensus 403 legl--------rv~i---------------------------------ppgis~hm~klm~icmnedpgkrpkfdmivp 441 (448)
T KOG0195|consen 403 LEGL--------RVHI---------------------------------PPGISRHMNKLMNICMNEDPGKRPKFDMIVP 441 (448)
T ss_pred hccc--------cccC---------------------------------CCCccHHHHHHHHHHhcCCCCcCCCcceehh
Confidence 0011 1111 1112556778999999999999999999999
Q ss_pred HHHHHH
Q 005045 701 NLKTIR 706 (717)
Q Consensus 701 ~l~~i~ 706 (717)
+||+++
T Consensus 442 ilekm~ 447 (448)
T KOG0195|consen 442 ILEKMI 447 (448)
T ss_pred hHHHhc
Confidence 999864
No 423
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.89 E-value=2.4e-23 Score=233.34 Aligned_cols=265 Identities=24% Similarity=0.362 Sum_probs=190.3
Q ss_pred CCCEEEccCccccccCCccccCCCCCCEEeccCCcCcccCChhhhccCCCCeEeccCCCCCCCCCccccCCCCccEEEcc
Q 005045 59 KLEIIGLGGSNLTGNVPAWIGNFSSLKALSLAWNNLRGSIPNELGQLSGLGFFTLYGNFISGIIPSSIYNISSIYYFSVT 138 (717)
Q Consensus 59 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~ 138 (717)
+.+.|+++++.++ .+|..+. ++|+.|+|++|+|+ .+|..+. ++|++|+|++|+++. +|..+. .+|+.|+|+
T Consensus 179 ~~~~L~L~~~~Lt-sLP~~Ip--~~L~~L~Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~Lts-LP~~l~--~~L~~L~Ls 249 (754)
T PRK15370 179 NKTELRLKILGLT-TIPACIP--EQITTLILDNNELK-SLPENLQ--GNIKTLYANSNQLTS-IPATLP--DTIQEMELS 249 (754)
T ss_pred CceEEEeCCCCcC-cCCcccc--cCCcEEEecCCCCC-cCChhhc--cCCCEEECCCCcccc-CChhhh--ccccEEECc
Confidence 4567777777777 5665554 46777777777777 4554443 467777777777773 444443 367777777
Q ss_pred cCcccccCCcccccCCCCcceeecccccccccCCccCCCCCCCCEEeccCccccccCCCCccCCCCCCeeeccccccCCc
Q 005045 139 QNQLHGQLPTDVGLTLPNLKIFAGAVNYFTGSIPVSLSNASNLQVLDFAENGLTGTIPGNFGSLKDLVRLNFDQNELGSR 218 (717)
Q Consensus 139 ~N~l~~~l~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~ 218 (717)
+|++. .+|..++ ++|+.|++++|.++. +|..+. ++|+.|++++|+++ .+|..+. ++|+.|++++|.++.+
T Consensus 250 ~N~L~-~LP~~l~---s~L~~L~Ls~N~L~~-LP~~l~--~sL~~L~Ls~N~Lt-~LP~~lp--~sL~~L~Ls~N~Lt~L 319 (754)
T PRK15370 250 INRIT-ELPERLP---SALQSLDLFHNKISC-LPENLP--EELRYLSVYDNSIR-TLPAHLP--SGITHLNVQSNSLTAL 319 (754)
T ss_pred CCccC-cCChhHh---CCCCEEECcCCccCc-cccccC--CCCcEEECCCCccc-cCcccch--hhHHHHHhcCCccccC
Confidence 77776 6776553 467777888777773 555553 57899999999888 4555443 4788999999999876
Q ss_pred ccCchhhhhhhccCCCCCEEEeecCcccCcCchhhhhccccccEEecCCCccCCCCCccccCCCCCCEEEccCCcCcccc
Q 005045 219 EIGDLNFLKFLANCTSLEVLGLARNSFGGEMPISIANLSTHLRRLTMGENLMHGNIPVGIGNLVNLNLLGLEGNNLSGSV 298 (717)
Q Consensus 219 ~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 298 (717)
+. .+ .++|+.|++++|.++ .+|..+. ++|+.|++++|+++ .+|..+. ++|+.|+|++|+|+ .+
T Consensus 320 P~-------~l--~~sL~~L~Ls~N~Lt-~LP~~l~---~sL~~L~Ls~N~L~-~LP~~lp--~~L~~LdLs~N~Lt-~L 382 (754)
T PRK15370 320 PE-------TL--PPGLKTLEAGENALT-SLPASLP---PELQVLDVSKNQIT-VLPETLP--PTITTLDVSRNALT-NL 382 (754)
T ss_pred Cc-------cc--cccceeccccCCccc-cCChhhc---CcccEEECCCCCCC-cCChhhc--CCcCEEECCCCcCC-CC
Confidence 51 11 268999999999999 6787654 58999999999998 4666553 68999999999999 56
Q ss_pred chhhhcCCCCCeEEcccCcCCCCCCccc----ccccccceeecccccccccCCcCccCcCCCceEEeecccCCCC
Q 005045 299 PEVIGRLNKLEGLGLNVNKFSGLIPSSL----GNLTILTRLWMEENRLEGSIPPSLGNCQKLLVLNLSSNDLNGT 369 (717)
Q Consensus 299 ~~~~~~l~~L~~L~Ls~N~l~~~~~~~~----~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ 369 (717)
|..+.. .|+.|++++|+++++ |..+ ..++.+..|+|.+|+++. ..+++|+.+ ++.+.+.|+
T Consensus 383 P~~l~~--sL~~LdLs~N~L~~L-P~sl~~~~~~~~~l~~L~L~~Npls~------~tl~~L~~L-l~s~~~~gp 447 (754)
T PRK15370 383 PENLPA--ALQIMQASRNNLVRL-PESLPHFRGEGPQPTRIIVEYNPFSE------RTIQNMQRL-MSSVGYQGP 447 (754)
T ss_pred CHhHHH--HHHHHhhccCCcccC-chhHHHHhhcCCCccEEEeeCCCccH------HHHHHHHHh-hhcccccCC
Confidence 766653 699999999999954 5544 345889999999999972 344555555 455666554
No 424
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.88 E-value=1.4e-22 Score=208.92 Aligned_cols=178 Identities=22% Similarity=0.191 Sum_probs=134.3
Q ss_pred CCcccccccccccccccccCcccccceEEEEeC--CCchhhhHHhHhh-----hhhHHHHHHHHHHHHhcCCCCceeEEE
Q 005045 379 MSYSDISKSTDNFSKENLIGTGSFGSVYKGTLG--DGTIVAIKVLKLQ-----QQGALKSFIDECNALKSTRHRNILRVI 451 (717)
Q Consensus 379 ~s~~~~~~~~~~y~~~~~ig~g~~g~v~~~~~~--~~~~vavK~~~~~-----~~~~~~~~~~e~~~l~~l~h~ni~~~~ 451 (717)
.+.+......++|++.+.||+|+||.||+|.++ +++.+|+|+.... .......+.+|+++++++.|+|++..+
T Consensus 8 ~~~~~~~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l 87 (365)
T PRK09188 8 LPGDQIPALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQL 87 (365)
T ss_pred CcccccccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEE
Confidence 445566677889999999999999999999864 5777899876422 223456789999999999999998543
Q ss_pred EeeccccCCCCceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCC-CCCC
Q 005045 452 TACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDL-KPSN 530 (717)
Q Consensus 452 ~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl-kp~N 530 (717)
..+ +..|+||||++|++|... ... . ...++.++++||+|||+. ||+|||| ||+|
T Consensus 88 ~~~--------~~~~LVmE~~~G~~L~~~-~~~-------~------~~~~~~~i~~aL~~lH~~---gIiHrDL~KP~N 142 (365)
T PRK09188 88 LAT--------GKDGLVRGWTEGVPLHLA-RPH-------G------DPAWFRSAHRALRDLHRA---GITHNDLAKPQN 142 (365)
T ss_pred EEc--------CCcEEEEEccCCCCHHHh-Ccc-------c------hHHHHHHHHHHHHHHHHC---CCeeCCCCCcce
Confidence 321 246999999999999632 111 1 146788999999999998 9999999 9999
Q ss_pred EEeCCCCceEEeeeccchhcccccCCCCC-CcceeecccccccccCCCccCC
Q 005045 531 VLLDKDMTAHVGDFGLAKFLFEISDNPSK-NQTVSIGLKGSIGYIPPEHMNG 581 (717)
Q Consensus 531 Ill~~~~~~kl~Dfg~~~~~~~~~~~~~~-~~~~~~~~~~~~~y~aPE~~~~ 581 (717)
|+++.++.+||+|||+|+.+......... ......+..+++.|+|||.+..
T Consensus 143 ILv~~~~~ikLiDFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~ 194 (365)
T PRK09188 143 WLMGPDGEAAVIDFQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTP 194 (365)
T ss_pred EEEcCCCCEEEEECccceecccCcchhhhhhhhhhhhhhccCccCCcccCCh
Confidence 99999999999999999876332211110 0111245678889999999753
No 425
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.87 E-value=1.5e-21 Score=202.79 Aligned_cols=208 Identities=24% Similarity=0.311 Sum_probs=163.9
Q ss_pred ccccccccCcccccceEEEEeCCC--chhhhHHhHhhhhhHHHHHHHHHHHHhcCC----CCceeEEEEeeccccCCCCc
Q 005045 390 NFSKENLIGTGSFGSVYKGTLGDG--TIVAIKVLKLQQQGALKSFIDECNALKSTR----HRNILRVITACSSVDLEGND 463 (717)
Q Consensus 390 ~y~~~~~ig~g~~g~v~~~~~~~~--~~vavK~~~~~~~~~~~~~~~e~~~l~~l~----h~ni~~~~~~~~~~~~~~~~ 463 (717)
+|.+.++||+|+||.||.|..... +.+|+|............+..|+.++..+. .+++..+++.+. ....
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~----~~~~ 94 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGR----STED 94 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEecc----CCCc
Confidence 899999999999999999996543 478888876543332236777888888886 368888888852 3556
Q ss_pred eEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCC-----Cc
Q 005045 464 FKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKD-----MT 538 (717)
Q Consensus 464 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~-----~~ 538 (717)
..++||+.+ |.+|.++...... +.++..++..++.|++.+|.++|+. |++||||||.|+++... ..
T Consensus 95 ~~~iVM~l~-G~sL~dl~~~~~~-----~~fs~~T~l~ia~q~l~~l~~lH~~---G~iHRDiKp~N~~~g~~~~~~~~~ 165 (322)
T KOG1164|consen 95 FNFIVMSLL-GPSLEDLRKRNPP-----GRFSRKTVLRIAIQNLNALEDLHSK---GFIHRDIKPENFVVGQSSRSEVRT 165 (322)
T ss_pred eeEEEEecc-CccHHHHHHhCCC-----CCcCHhHHHHHHHHHHHHHHHHHhc---CcccCCcCHHHeeecCCCCcccce
Confidence 889999988 8999998865532 6799999999999999999999997 99999999999999865 36
Q ss_pred eEEeeeccchhcccccCCCC--CCcce-eecccccccccCCCccCC-CCCcccchhhHHHHHHHHHhCCCCCCCCC
Q 005045 539 AHVGDFGLAKFLFEISDNPS--KNQTV-SIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRPTGDMF 610 (717)
Q Consensus 539 ~kl~Dfg~~~~~~~~~~~~~--~~~~~-~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~ 610 (717)
+.+.|||+++...-...... ..... .....||..|+++.+..+ +.+.+.|+||++.++.+++.|..||....
T Consensus 166 ~~llDfGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~ 241 (322)
T KOG1164|consen 166 LYLLDFGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALE 241 (322)
T ss_pred EEEEecCCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCcccc
Confidence 99999999993321111111 11111 234669999999999665 58999999999999999999999996543
No 426
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.87 E-value=7.8e-22 Score=180.71 Aligned_cols=208 Identities=23% Similarity=0.335 Sum_probs=170.3
Q ss_pred cccccccccccCcccccceEEEE-eCCCchhhhHHhHhhhhhHHHHHHHHHHHHhcCCC-CceeEEEEeeccccCCCCce
Q 005045 387 STDNFSKENLIGTGSFGSVYKGT-LGDGTIVAIKVLKLQQQGALKSFIDECNALKSTRH-RNILRVITACSSVDLEGNDF 464 (717)
Q Consensus 387 ~~~~y~~~~~ig~g~~g~v~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h-~ni~~~~~~~~~~~~~~~~~ 464 (717)
..+.|.++++||+|+||.+|.|. ..+|+.||+|+-...... ..+..|.++...+++ ..|+.+..+ ..+..+
T Consensus 13 v~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~h--pqL~yEskvY~iL~~g~GiP~i~~y-----~~e~~y 85 (341)
T KOG1163|consen 13 VGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAKH--PQLLYESKVYRILQGGVGIPHIRHY-----GTEKDY 85 (341)
T ss_pred eccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCCC--cchhHHHHHHHHhccCCCCchhhhh-----cccccc
Confidence 46789999999999999999999 569999999987654332 456678888888854 566666666 445568
Q ss_pred EEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCC---CCceEE
Q 005045 465 KALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDK---DMTAHV 541 (717)
Q Consensus 465 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~---~~~~kl 541 (717)
-.+||+.. |.+|.+.+.-.. ..++..+++-+|.|++.-++|+|.. +++||||||+|++..- ...+.+
T Consensus 86 nvlVMdLL-GPsLEdLfnfC~------R~ftmkTvLMLaDQml~RiEyvH~r---~fiHRDIKPdNFLMGlgrh~~kl~L 155 (341)
T KOG1163|consen 86 NVLVMDLL-GPSLEDLFNFCS------RRFTMKTVLMLADQMLSRIEYVHLR---NFIHRDIKPDNFLMGLGRHCNKLYL 155 (341)
T ss_pred ceeeeecc-CccHHHHHHHHh------hhhhHHhHHHHHHHHHHHHHHHHhh---ccccccCCccceeeccccccceEEE
Confidence 89999998 899999886443 6799999999999999999999997 9999999999999963 347999
Q ss_pred eeeccchhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHhCCCCCCCCCC
Q 005045 542 GDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRPTGDMFK 611 (717)
Q Consensus 542 ~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~ 611 (717)
+|||+|+.+........-+........||..|.+-...-| +-+.+.|+=|+|.++-++--|..||.+.-.
T Consensus 156 IDFGLaKky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka 226 (341)
T KOG1163|consen 156 IDFGLAKKYRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKA 226 (341)
T ss_pred EeccchhhhccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccch
Confidence 9999999886655555555666677889999988777554 357889999999999999999999988643
No 427
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.86 E-value=8.4e-23 Score=223.06 Aligned_cols=274 Identities=22% Similarity=0.263 Sum_probs=199.4
Q ss_pred cccCCCCCCcccccCCCCcccccccccccccccccCcccccceEEEEeCCCchhhhHHhHhhhhhH----HHHHHHHHHH
Q 005045 363 SNDLNGTIPKEVRQSGMSYSDISKSTDNFSKENLIGTGSFGSVYKGTLGDGTIVAIKVLKLQQQGA----LKSFIDECNA 438 (717)
Q Consensus 363 ~N~l~~~~p~~~~~~~~s~~~~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~~~----~~~~~~e~~~ 438 (717)
||.+++ |..+.....-++++.. +|.-.+-+|++.|=+|.+|++..|. |+||++...++.. ..+...|++
T Consensus 2 Gnqls~--~sQi~~~e~yfsd~~~---e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik- 74 (1431)
T KOG1240|consen 2 GNQLSL--PSQISPVEVYFSDLSV---ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIK- 74 (1431)
T ss_pred Cccccc--ccccchHHHHhhcCcc---ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHH-
Confidence 566765 4444433344445443 6777889999999999999998888 8889987654321 222233444
Q ss_pred HhcCCCCceeEEEEeeccccCCCCceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCC
Q 005045 439 LKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCD 518 (717)
Q Consensus 439 l~~l~h~ni~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~ 518 (717)
....++||.+.+... ....+..|+|-+|+. -+|+|.+..+ +-+...+.+-||.|++.|+..+|..
T Consensus 75 ~~l~~~pn~lPfqk~-----~~t~kAAylvRqyvk-hnLyDRlSTR-------PFL~~iEKkWiaFQLL~al~qcH~~-- 139 (1431)
T KOG1240|consen 75 FALMKAPNCLPFQKV-----LVTDKAAYLVRQYVK-HNLYDRLSTR-------PFLVLIEKKWIAFQLLKALSQCHKL-- 139 (1431)
T ss_pred HHhhcCCcccchHHH-----HHhhHHHHHHHHHHh-hhhhhhhccc-------hHHHHHHHHHHHHHHHHHHHHHHHc--
Confidence 555699999987666 455567889999984 6999999866 5688889999999999999999998
Q ss_pred CCeeecCCCCCCEEeCCCCceEEeeeccchhcccccCCCCCCcceeecccccccccCCCccCC------------CCCcc
Q 005045 519 TPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG------------QVSIL 586 (717)
Q Consensus 519 ~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~------------~~~~~ 586 (717)
||+|||||.+||||+....+.|+||..-+...-+.+++.+......+-..-.+|.|||-+-. ..+++
T Consensus 140 -gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~pa 218 (1431)
T KOG1240|consen 140 -GVCHGDIKSENILITSWNWLYLTDFASFKPTYLPEDNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPA 218 (1431)
T ss_pred -CccccccccceEEEeeechhhhhcccccCCccCCCCCcccceEEEecCCceeeecChHhhhccccccccCCcccccChh
Confidence 99999999999999999999999998877766666666666555666666779999997421 14688
Q ss_pred cchhhHHHHHHHHHh-CCCCCCCCCCCchhhhHHHH-hcCChh-hhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhh
Q 005045 587 GDIYSYGILLLEMFT-GKRPTGDMFKDDFSIHMFVS-MALPDH-VMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLE 663 (717)
Q Consensus 587 sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 663 (717)
.||||+|||++|+++ |++||.-. ..+.+..+ ...++. +.++-|
T Consensus 219 MDIFS~GCViaELf~Eg~PlF~LS----QL~aYr~~~~~~~e~~Le~Ied------------------------------ 264 (1431)
T KOG1240|consen 219 MDIFSAGCVIAELFLEGRPLFTLS----QLLAYRSGNADDPEQLLEKIED------------------------------ 264 (1431)
T ss_pred hhhhhhhHHHHHHHhcCCCcccHH----HHHhHhccCccCHHHHHHhCcC------------------------------
Confidence 899999999999999 78888531 00000000 000111 111111
Q ss_pred hcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHHHHHH
Q 005045 664 VNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVNNLKT 704 (717)
Q Consensus 664 ~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~~l~~ 704 (717)
..+..++..|++.||+.|-||.+.++.-..
T Consensus 265 -----------~~~Rnlil~Mi~rdPs~RlSAedyL~~yrG 294 (1431)
T KOG1240|consen 265 -----------VSLRNLILSMIQRDPSKRLSAEDYLQKYRG 294 (1431)
T ss_pred -----------ccHHHHHHHHHccCchhccCHHHHHHhhhc
Confidence 135678999999999999999999987443
No 428
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.84 E-value=2.2e-21 Score=213.70 Aligned_cols=256 Identities=23% Similarity=0.260 Sum_probs=180.6
Q ss_pred ccccccCcccccceEEEEeC-CCchhhhHHhH----hh--hhhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCce
Q 005045 392 SKENLIGTGSFGSVYKGTLG-DGTIVAIKVLK----LQ--QQGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDF 464 (717)
Q Consensus 392 ~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~----~~--~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 464 (717)
...+.+|.|++|.|+.+... ..+.++.|.+. .. .......+..|+.+-..+.|+|++..+....+. ..
T Consensus 321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~-----~~ 395 (601)
T KOG0590|consen 321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEI-----DG 395 (601)
T ss_pred CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhc-----cc
Confidence 34567899999988877733 44445555443 11 111223366777788889999998777664332 23
Q ss_pred EEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeee
Q 005045 465 KALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDF 544 (717)
Q Consensus 465 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Df 544 (717)
..-+||||++ +|...+... ..+...++-.+++|++.|++|+|+. |+.|||+|++|++++.+|.+||+||
T Consensus 396 ~~~~mE~~~~-Dlf~~~~~~-------~~~~~~e~~c~fKqL~~Gv~y~h~~---GiahrdlK~enll~~~~g~lki~Df 464 (601)
T KOG0590|consen 396 ILQSMEYCPY-DLFSLVMSN-------GKLTPLEADCFFKQLLRGVKYLHSM---GLAHRDLKLENLLVTENGILKIIDF 464 (601)
T ss_pred chhhhhcccH-HHHHHHhcc-------cccchhhhhHHHHHHHHHHHHHHhc---CceeccCccccEEEecCCceEEeec
Confidence 3334999998 999988754 4688889999999999999999998 9999999999999999999999999
Q ss_pred ccchhcccccCCCCCCcceeecccccccccCCCccCCC-C-CcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHHHh
Q 005045 545 GLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNGQ-V-SILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVSM 622 (717)
Q Consensus 545 g~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~-~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~ 622 (717)
|.+....-.. ........+..|..+|+|||++.+. | ....||||.|+++..|.+|+.||.....++..+.....
T Consensus 465 g~~~vf~~~~---e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~- 540 (601)
T KOG0590|consen 465 GAASVFRYPW---EKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNY- 540 (601)
T ss_pred CcceeeccCc---chhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhhcc-
Confidence 9987552111 1112344567899999999997664 5 56679999999999999999999877555443200000
Q ss_pred cCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHHH
Q 005045 623 ALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVNN 701 (717)
Q Consensus 623 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~~ 701 (717)
..+ .... ..+ . .....-+.+-..++.+|++++|.+|.|+++|++.
T Consensus 541 --~~~------~~~~----~~~---~-------------------~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d 585 (601)
T KOG0590|consen 541 --SDQ------RNIF----EGP---N-------------------RLLSLLPRETRIIIYRMLQLDPTKRITIEQILND 585 (601)
T ss_pred --ccc------cccc----cCh---H-------------------HHHHhchhhHHHHHHHHccCChhheecHHHHhhC
Confidence 000 0000 000 0 0112225556779999999999999999999864
No 429
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.83 E-value=5.3e-20 Score=176.53 Aligned_cols=211 Identities=22% Similarity=0.320 Sum_probs=177.9
Q ss_pred cccccccccccccccCcccccceEEEE-eCCCchhhhHHhHhhhhhHHHHHHHHHHHHhcC-CCCceeEEEEeeccccCC
Q 005045 383 DISKSTDNFSKENLIGTGSFGSVYKGT-LGDGTIVAIKVLKLQQQGALKSFIDECNALKST-RHRNILRVITACSSVDLE 460 (717)
Q Consensus 383 ~~~~~~~~y~~~~~ig~g~~g~v~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~~~~ 460 (717)
.+....-.|++.++||+|.||.++.|+ .-+++.||||.-.... ....+..|.+..+.+ ..+.|..+|.+ .+
T Consensus 22 ~~~~VG~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS--~APQLrdEYr~YKlL~g~~GIP~vYYF-----Gq 94 (449)
T KOG1165|consen 22 GVLMVGPHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKS--EAPQLRDEYRTYKLLGGTEGIPQVYYF-----GQ 94 (449)
T ss_pred CceEecccceeccccccCcceeeecccccccCceEEEEeccccC--CcchHHHHHHHHHHHcCCCCCCceeee-----cc
Confidence 445566789999999999999999999 4589999999865433 235677888888888 67899999888 55
Q ss_pred CCceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCC---
Q 005045 461 GNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDM--- 537 (717)
Q Consensus 461 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~--- 537 (717)
++.+-.+|+|.+ |.+|.|.+.-.. .+++..++..+|.|++.-++|+|+. ..|.|||||+|++|...+
T Consensus 95 eG~~NiLVidLL-GPSLEDLFD~Cg------R~FSvKTV~miA~Qmi~rie~vH~k---~LIYRDIKPdNFLIGrp~~k~ 164 (449)
T KOG1165|consen 95 EGKYNILVIDLL-GPSLEDLFDLCG------RRFSVKTVAMIAKQMITRIEYVHEK---DLIYRDIKPDNFLIGRPGTKD 164 (449)
T ss_pred ccchhhhhhhhh-CcCHHHHHHHhc------CcccHHhHHHHHHHHHHHHHHHHhc---ceeecccCccceeecCCCCCC
Confidence 667888999998 889998876543 6799999999999999999999997 899999999999997544
Q ss_pred --ceEEeeeccchhcccccCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHHHHHHHHhCCCCCCCCC
Q 005045 538 --TAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGILLLEMFTGKRPTGDMF 610 (717)
Q Consensus 538 --~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~ 610 (717)
.+.++|||+|+.+..+...-.-++...+...||..||+-....| +-+.+.|+=|+|=|+.+.+-|..||.+.-
T Consensus 165 ~n~IhiiDFGmAK~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLK 240 (449)
T KOG1165|consen 165 ANVIHIIDFGMAKEYRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLK 240 (449)
T ss_pred CceEEEEeccchhhhcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCcccccc
Confidence 68999999999987766666666666677889999999888444 57889999999999999999999998763
No 430
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.82 E-value=9e-22 Score=205.76 Aligned_cols=259 Identities=19% Similarity=0.226 Sum_probs=121.7
Q ss_pred EEEcCCCcCc-CCCCcCCcCCCCCCEEECCCCcccc----cCCcCCCCCCCCCEEEccCccccc------cCCccccCCC
Q 005045 14 DLNLTYNYLS-GKIPTNLSHCTELRSFEASVNDFVG----QIPNQLSSLTKLEIIGLGGSNLTG------NVPAWIGNFS 82 (717)
Q Consensus 14 ~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~----~~p~~~~~l~~L~~L~L~~n~l~~------~~p~~~~~l~ 82 (717)
.|+|.++.++ ...+..|..+.+|++|++++|.++. .++..+...++|+.|+++++.+.. .++..+..++
T Consensus 2 ~l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~ 81 (319)
T cd00116 2 QLSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGC 81 (319)
T ss_pred ccccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcC
Confidence 3556666665 2334445555566666666666532 233344555556666666655541 1223344455
Q ss_pred CCCEEeccCCcCcccCChhhhccCC---CCeEeccCCCCCC----CCCccccCC-CCccEEEcccCcccccCCcccccCC
Q 005045 83 SLKALSLAWNNLRGSIPNELGQLSG---LGFFTLYGNFISG----IIPSSIYNI-SSIYYFSVTQNQLHGQLPTDVGLTL 154 (717)
Q Consensus 83 ~L~~L~L~~n~l~~~~~~~~~~l~~---L~~L~L~~N~i~~----~~~~~~~~l-~~L~~L~L~~N~l~~~l~~~~~~~l 154 (717)
+|+.|+|++|.+.+..+..|..+.+ |+.|++++|.++. .+...+..+ ++|+.|+|++|.+++....
T Consensus 82 ~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~------ 155 (319)
T cd00116 82 GLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCE------ 155 (319)
T ss_pred ceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHH------
Confidence 5555555555554434444444333 5555555555441 111223333 4444444444444311100
Q ss_pred CCcceeecccccccccCCccCCCCCCCCEEeccCcccccc----CCCCccCCCCCCeeeccccccCCcccCchhhhhhhc
Q 005045 155 PNLKIFAGAVNYFTGSIPVSLSNASNLQVLDFAENGLTGT----IPGNFGSLKDLVRLNFDQNELGSREIGDLNFLKFLA 230 (717)
Q Consensus 155 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~----~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~ 230 (717)
.++..+..+++|++|++++|.+++. ++..+..+++|+.|++++|.++...... +...+.
T Consensus 156 ---------------~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~--l~~~~~ 218 (319)
T cd00116 156 ---------------ALAKALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASA--LAETLA 218 (319)
T ss_pred ---------------HHHHHHHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHH--HHHHhc
Confidence 1222344555666666666666531 2223344456666666666665433221 133455
Q ss_pred cCCCCCEEEeecCcccCcCchhhhhcc----ccccEEecCCCccCC----CCCccccCCCCCCEEEccCCcCc
Q 005045 231 NCTSLEVLGLARNSFGGEMPISIANLS----THLRRLTMGENLMHG----NIPVGIGNLVNLNLLGLEGNNLS 295 (717)
Q Consensus 231 ~l~~L~~L~L~~N~l~~~~p~~~~~~~----~~L~~L~l~~N~l~~----~~~~~~~~l~~L~~L~L~~N~l~ 295 (717)
.+++|+.|++++|.+++.....+.... +.|++|++++|.++. .+...+..+++|++|++++|.++
T Consensus 219 ~~~~L~~L~ls~n~l~~~~~~~l~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~ 291 (319)
T cd00116 219 SLKSLEVLNLGDNNLTDAGAAALASALLSPNISLLTLSLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFG 291 (319)
T ss_pred ccCCCCEEecCCCcCchHHHHHHHHHHhccCCCceEEEccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCc
Confidence 566666667766666643333332221 244555555554431 11122333344555555555444
No 431
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.82 E-value=1.1e-20 Score=180.71 Aligned_cols=174 Identities=14% Similarity=0.133 Sum_probs=132.4
Q ss_pred cccccccccccCcccccceEEEEeCCCchhhhHHhHhhhh---hHHHH------HHHHHHHHhcCCCCceeEEEEeeccc
Q 005045 387 STDNFSKENLIGTGSFGSVYKGTLGDGTIVAIKVLKLQQQ---GALKS------FIDECNALKSTRHRNILRVITACSSV 457 (717)
Q Consensus 387 ~~~~y~~~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~---~~~~~------~~~e~~~l~~l~h~ni~~~~~~~~~~ 457 (717)
..++|++.+.+|.|+||.||++.. +++.+|+|++..... ....+ +++|++.+.++.|++|..+.+++...
T Consensus 29 l~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~ 107 (232)
T PRK10359 29 LSYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLA 107 (232)
T ss_pred hhCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeec
Confidence 367999999999999999999766 577899999975432 22223 68999999999999999988875432
Q ss_pred cC---CCCceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeC
Q 005045 458 DL---EGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLD 534 (717)
Q Consensus 458 ~~---~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~ 534 (717)
.. ......++||||++|.+|.++.. ++. ....+++.++..+|.. |++|||++|+||+++
T Consensus 108 ~~~~~~~~~~~~lvmEyi~G~tL~~~~~-----------~~~----~~~~~i~~~l~~lH~~---gi~H~Dikp~Nili~ 169 (232)
T PRK10359 108 ERKTLRYAHTYIMLIEYIEGVELNDMPE-----------ISE----DVKAKIKASIESLHQH---GMVSGDPHKGNFIVS 169 (232)
T ss_pred ccccccccCCeEEEEEEECCccHHHhhh-----------ccH----HHHHHHHHHHHHHHHc---CCccCCCChHHEEEe
Confidence 21 12346899999999999988732 222 2466999999999998 999999999999999
Q ss_pred CCCceEEeeeccchhcccccCCCCCCcceeecccccccccCCC-c-cCCCCCcccchhhHHHHHHHHH
Q 005045 535 KDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPE-H-MNGQVSILGDIYSYGILLLEMF 600 (717)
Q Consensus 535 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE-~-~~~~~~~~sDvwslG~vl~ell 600 (717)
.+| ++++|||......+ . .|-+ + +...++.++|+||||+++....
T Consensus 170 ~~g-i~liDfg~~~~~~e-------~-------------~a~d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 170 KNG-LRIIDLSGKRCTAQ-------R-------------KAKDRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred CCC-EEEEECCCcccccc-------h-------------hhHHHHHHHhHhcccccccceeEeehHHH
Confidence 988 99999998764310 0 0011 2 3444668999999999887554
No 432
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.81 E-value=2e-21 Score=203.17 Aligned_cols=108 Identities=20% Similarity=0.263 Sum_probs=62.1
Q ss_pred cccEEecCCCccCCC----CCccccCCCCCCEEEccCCcCccccchhhhc-----CCCCCeEEcccCcCCCC----CCcc
Q 005045 259 HLRRLTMGENLMHGN----IPVGIGNLVNLNLLGLEGNNLSGSVPEVIGR-----LNKLEGLGLNVNKFSGL----IPSS 325 (717)
Q Consensus 259 ~L~~L~l~~N~l~~~----~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~-----l~~L~~L~Ls~N~l~~~----~~~~ 325 (717)
+|+.|++++|.+.+. +...+..+++|++|++++|++++.....+.. .+.|+.|++++|.++.. ....
T Consensus 194 ~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~ 273 (319)
T cd00116 194 NLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTDAGAAALASALLSPNISLLTLSLSCNDITDDGAKDLAEV 273 (319)
T ss_pred CCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCchHHHHHHHHHHhccCCCceEEEccCCCCCcHHHHHHHHH
Confidence 455555555544322 2223455667777777777776433333322 36777777777777622 1233
Q ss_pred cccccccceeeccccccccc----CCcCccCc-CCCceEEeecccC
Q 005045 326 LGNLTILTRLWMEENRLEGS----IPPSLGNC-QKLLVLNLSSNDL 366 (717)
Q Consensus 326 ~~~l~~L~~L~L~~N~l~~~----~p~~~~~l-~~L~~L~l~~N~l 366 (717)
+..+++|+++++++|.++.. +...+... +.|++|++.+|+|
T Consensus 274 ~~~~~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (319)
T cd00116 274 LAEKESLLELDLRGNKFGEEGAQLLAESLLEPGNELESLWVKDDSF 319 (319)
T ss_pred HhcCCCccEEECCCCCCcHHHHHHHHHHHhhcCCchhhcccCCCCC
Confidence 44456777777777777743 33444444 5777777777764
No 433
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.81 E-value=7.5e-19 Score=185.06 Aligned_cols=205 Identities=34% Similarity=0.505 Sum_probs=164.8
Q ss_pred cccccccCcccccceEEEEeCCCchhhhHHhHhhhhh---HHHHHHHHHHHHhcCCCC-ceeEEEEeeccccCCCCceEE
Q 005045 391 FSKENLIGTGSFGSVYKGTLGDGTIVAIKVLKLQQQG---ALKSFIDECNALKSTRHR-NILRVITACSSVDLEGNDFKA 466 (717)
Q Consensus 391 y~~~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~-ni~~~~~~~~~~~~~~~~~~~ 466 (717)
|.+.+.+|.|+|+.||.+.+. ..+++|.+...... ....+.+|+.+++.+.|+ +++++.+.+ ......+
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~-----~~~~~~~ 74 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFF-----QDEGSLY 74 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEE-----ecCCEEE
Confidence 778899999999999999976 66788887654322 467889999999999988 799999985 3334589
Q ss_pred EEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCC-ceEEeeec
Q 005045 467 LVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDM-TAHVGDFG 545 (717)
Q Consensus 467 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~-~~kl~Dfg 545 (717)
++++++.++++.+++...... ..++......++.|++.++.|+|+. +++|||+||+||+++..+ .++++|||
T Consensus 75 ~~~~~~~~~~l~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~~H~~---~~~hrd~kp~nil~~~~~~~~~l~dfg 147 (384)
T COG0515 75 LVMEYVDGGSLEDLLKKIGRK----GPLSESEALFILAQILSALEYLHSK---GIIHRDIKPENILLDRDGRVVKLIDFG 147 (384)
T ss_pred EEEecCCCCcHHHHHHhcccc----cCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeecCCCCeEEEeccC
Confidence 999999999999777654210 2688999999999999999999998 899999999999999988 79999999
Q ss_pred cchhcccccCCCCCCcceeecccccccccCCCccCC----CCCcccchhhHHHHHHHHHhCCCCCCCCC
Q 005045 546 LAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG----QVSILGDIYSYGILLLEMFTGKRPTGDMF 610 (717)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~----~~~~~sDvwslG~vl~elltg~~p~~~~~ 610 (717)
.+............. .......|+..|+|||...+ ......|+||+|++++++++|..||....
T Consensus 148 ~~~~~~~~~~~~~~~-~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~ 215 (384)
T COG0515 148 LAKLLPDPGSTSSIP-ALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEK 215 (384)
T ss_pred cceecCCCCcccccc-ccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCC
Confidence 987542211111000 12355679999999999765 57889999999999999999999976543
No 434
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.80 E-value=1.3e-21 Score=170.04 Aligned_cols=164 Identities=23% Similarity=0.465 Sum_probs=84.3
Q ss_pred cCCCCCCEEECCCCcccccCCcCCCCCCCCCEEEccCccccccCCccccCCCCCCEEeccCCcCcccCChhhhccCCCCe
Q 005045 31 SHCTELRSFEASVNDFVGQIPNQLSSLTKLEIIGLGGSNLTGNVPAWIGNFSSLKALSLAWNNLRGSIPNELGQLSGLGF 110 (717)
Q Consensus 31 ~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 110 (717)
..+++++.|.||+|+++ .+|..+..+.+|++|++++|+|+ .+|..++.+++|+.|+++-|++. +.|..|+.++.|+.
T Consensus 30 f~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~lev 106 (264)
T KOG0617|consen 30 FNMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALEV 106 (264)
T ss_pred cchhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhhh
Confidence 33444445555555554 34444455555555555555554 44444555555555555555554 44445555555555
Q ss_pred EeccCCCCC-CCCCccccCCCCccEEEcccCcccccCCcccccCCCCcceeecccccccccCCccCCCCCCCCEEeccCc
Q 005045 111 FTLYGNFIS-GIIPSSIYNISSIYYFSVTQNQLHGQLPTDVGLTLPNLKIFAGAVNYFTGSIPVSLSNASNLQVLDFAEN 189 (717)
Q Consensus 111 L~L~~N~i~-~~~~~~~~~l~~L~~L~L~~N~l~~~l~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 189 (717)
|||++|++. ..+|+.|..++.|+-|+|++|.+. -+|.++. .+.+|++|.+.+|.+- .+|..++.++.|++|.+.+|
T Consensus 107 ldltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg-~lt~lqil~lrdndll-~lpkeig~lt~lrelhiqgn 183 (264)
T KOG0617|consen 107 LDLTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVG-KLTNLQILSLRDNDLL-SLPKEIGDLTRLRELHIQGN 183 (264)
T ss_pred hhccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhh-hhcceeEEeeccCchh-hCcHHHHHHHHHHHHhcccc
Confidence 555554443 234444555555555555555554 4444444 4455555555555444 35666666666777777777
Q ss_pred cccccCCCCccC
Q 005045 190 GLTGTIPGNFGS 201 (717)
Q Consensus 190 ~l~~~~~~~~~~ 201 (717)
+++ ++|..+++
T Consensus 184 rl~-vlppel~~ 194 (264)
T KOG0617|consen 184 RLT-VLPPELAN 194 (264)
T ss_pred eee-ecChhhhh
Confidence 776 55544443
No 435
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.79 E-value=1.1e-19 Score=172.67 Aligned_cols=139 Identities=22% Similarity=0.176 Sum_probs=106.3
Q ss_pred ccccCcccccceEEEEeCCCchhhhHHhHhhhhhH--------------------------HHHHHHHHHHHhcCCCCce
Q 005045 394 ENLIGTGSFGSVYKGTLGDGTIVAIKVLKLQQQGA--------------------------LKSFIDECNALKSTRHRNI 447 (717)
Q Consensus 394 ~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~~~--------------------------~~~~~~e~~~l~~l~h~ni 447 (717)
...||+|++|.||.|..++|+.||+|++....... ......|+++++++.++++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v 81 (190)
T cd05147 2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI 81 (190)
T ss_pred CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 46899999999999998789999999986442110 1223459999999977765
Q ss_pred eEEEEeeccccCCCCceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHH-HhcCCCCeeecCC
Q 005045 448 LRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYL-HHHCDTPIAHCDL 526 (717)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~L-H~~~~~~ivH~dl 526 (717)
....... . ...++||||++|+++....... ..++...+..++.|++.+|+++ |+. ||+||||
T Consensus 82 ~~p~~~~----~---~~~~iVmE~i~g~~l~~~~~~~-------~~~~~~~~~~i~~qi~~~L~~l~H~~---giiHrDl 144 (190)
T cd05147 82 PCPEPIL----L---KSHVLVMEFIGDDGWAAPRLKD-------APLSESKARELYLQVIQIMRILYQDC---RLVHADL 144 (190)
T ss_pred CCCcEEE----e---cCCEEEEEEeCCCCCcchhhhc-------CCCCHHHHHHHHHHHHHHHHHHHHhC---CcccCCC
Confidence 3322211 0 1238999999887665443222 4578899999999999999999 676 9999999
Q ss_pred CCCCEEeCCCCceEEeeeccchhc
Q 005045 527 KPSNVLLDKDMTAHVGDFGLAKFL 550 (717)
Q Consensus 527 kp~NIll~~~~~~kl~Dfg~~~~~ 550 (717)
||+||+++ ++.++|+|||+|...
T Consensus 145 kP~NIli~-~~~v~LiDFG~a~~~ 167 (190)
T cd05147 145 SEYNLLYH-DGKLYIIDVSQSVEH 167 (190)
T ss_pred CHHHEEEE-CCcEEEEEccccccC
Confidence 99999998 578999999998754
No 436
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.78 E-value=1.6e-21 Score=169.31 Aligned_cols=160 Identities=24% Similarity=0.409 Sum_probs=124.2
Q ss_pred CCCCCCCCEEEccCccccccCCccccCCCCCCEEeccCCcCcccCChhhhccCCCCeEeccCCCCCCCCCccccCCCCcc
Q 005045 54 LSSLTKLEIIGLGGSNLTGNVPAWIGNFSSLKALSLAWNNLRGSIPNELGQLSGLGFFTLYGNFISGIIPSSIYNISSIY 133 (717)
Q Consensus 54 ~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~ 133 (717)
+.++.+++.|.||+|+++ .+|..+..+.+|+.|++++|+|+ .+|.++..+++|+.|+++-|++. +.|..|+.++-|+
T Consensus 29 Lf~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~le 105 (264)
T KOG0617|consen 29 LFNMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALE 105 (264)
T ss_pred ccchhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhh
Confidence 455667777888888888 66666778888888888888887 77777888888888888888877 7788888888888
Q ss_pred EEEcccCcccc-cCCcccccCCCCcceeecccccccccCCccCCCCCCCCEEeccCccccccCCCCccCCCCCCeeeccc
Q 005045 134 YFSVTQNQLHG-QLPTDVGLTLPNLKIFAGAVNYFTGSIPVSLSNASNLQVLDFAENGLTGTIPGNFGSLKDLVRLNFDQ 212 (717)
Q Consensus 134 ~L~L~~N~l~~-~l~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 212 (717)
.|||++|++.. .+|..+| .+..|+.|+|++|.+. .+|..++.+++|+.|.+.+|.+- .+|..++.++.|++|.+.+
T Consensus 106 vldltynnl~e~~lpgnff-~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~lrelhiqg 182 (264)
T KOG0617|consen 106 VLDLTYNNLNENSLPGNFF-YMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLRELHIQG 182 (264)
T ss_pred hhhccccccccccCCcchh-HHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHHHHhccc
Confidence 88888888764 4565555 7777888888888887 67777888888888888888777 6777788888888888888
Q ss_pred cccCCcc
Q 005045 213 NELGSRE 219 (717)
Q Consensus 213 N~l~~~~ 219 (717)
|+++.++
T Consensus 183 nrl~vlp 189 (264)
T KOG0617|consen 183 NRLTVLP 189 (264)
T ss_pred ceeeecC
Confidence 8887765
No 437
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.78 E-value=4.9e-19 Score=165.33 Aligned_cols=190 Identities=16% Similarity=0.064 Sum_probs=136.5
Q ss_pred ccccccCcccccceEEEEeCCCchhhhHHhHhhhh----hHHHHHHHHHHHHhcCC-CCceeEEEEeeccccCCCCceEE
Q 005045 392 SKENLIGTGSFGSVYKGTLGDGTIVAIKVLKLQQQ----GALKSFIDECNALKSTR-HRNILRVITACSSVDLEGNDFKA 466 (717)
Q Consensus 392 ~~~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~----~~~~~~~~e~~~l~~l~-h~ni~~~~~~~~~~~~~~~~~~~ 466 (717)
.+...+++|+||+||.+.. .+++++.+.+..... .+...+.+|+++++++. |+++++++++. ..+
T Consensus 5 ~~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~~---------~~~ 74 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHWD---------GRH 74 (218)
T ss_pred ccceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEEc---------CEE
Confidence 3567899999999998776 577777666654322 12346889999999995 57888888751 468
Q ss_pred EEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCC-CCCCEEeCCCCceEEeeec
Q 005045 467 LVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDL-KPSNVLLDKDMTAHVGDFG 545 (717)
Q Consensus 467 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl-kp~NIll~~~~~~kl~Dfg 545 (717)
++|||+.|.+|.+.... ....++.|++.++.++|++ ||+|||| ||+||+++.+|.++|+|||
T Consensus 75 lvmeyI~G~~L~~~~~~--------------~~~~~~~qi~~~L~~lH~~---GIvHrDL~kp~NILv~~~g~i~LIDFG 137 (218)
T PRK12274 75 LDRSYLAGAAMYQRPPR--------------GDLAYFRAARRLLQQLHRC---GVAHNDLAKEANWLVQEDGSPAVIDFQ 137 (218)
T ss_pred EEEeeecCccHHhhhhh--------------hhHHHHHHHHHHHHHHHHC---cCccCCCCCcceEEEcCCCCEEEEECC
Confidence 99999999888654321 1135788999999999998 9999999 7999999999999999999
Q ss_pred cchhcccccCC----CCCC--cceeecccccccccCCCc--cCCCC-CcccchhhHHHHHHHHHhCCCCCCC
Q 005045 546 LAKFLFEISDN----PSKN--QTVSIGLKGSIGYIPPEH--MNGQV-SILGDIYSYGILLLEMFTGKRPTGD 608 (717)
Q Consensus 546 ~~~~~~~~~~~----~~~~--~~~~~~~~~~~~y~aPE~--~~~~~-~~~sDvwslG~vl~elltg~~p~~~ 608 (717)
.+........- ...+ .....-...++.|++|+. +.... -.+.++++.|+.+|.++|+..|+-.
T Consensus 138 ~A~~~~~~~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~ 209 (218)
T PRK12274 138 LAVRGNPRARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWE 209 (218)
T ss_pred CceecCCcchHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccc
Confidence 99854211100 0000 000011224666777765 22233 3678999999999999999998644
No 438
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.78 E-value=1.5e-18 Score=170.36 Aligned_cols=205 Identities=22% Similarity=0.242 Sum_probs=141.1
Q ss_pred CCCceeEEEEeeccc----------------------cCCCCceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHH
Q 005045 443 RHRNILRVITACSSV----------------------DLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRL 500 (717)
Q Consensus 443 ~h~ni~~~~~~~~~~----------------------~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~ 500 (717)
+||||+++..++.+. ...++..+|+||.-++ .+|.+|+-.+ ..+.....
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~-~tLr~yl~~~--------~~s~r~~~ 344 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYR-QTLREYLWTR--------HRSYRTGR 344 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcch-hhHHHHHhcC--------CCchHHHH
Confidence 599999998765332 1344667899999985 6999998643 34666778
Q ss_pred HHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeC--CCC--ceEEeeeccchhcccccCCCCCCcceeecccccccccCC
Q 005045 501 NIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLD--KDM--TAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPP 576 (717)
Q Consensus 501 ~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~--~~~--~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aP 576 (717)
-+..|+++|+.|||++ ||.|||+|++||++. +++ .+.|+|||++--....+-... .........|...-|||
T Consensus 345 ~~laQlLEav~hL~~h---gvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlp-y~S~~Vd~GGNa~lmAP 420 (598)
T KOG4158|consen 345 VILAQLLEAVTHLHKH---GVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLP-YESDEVDLGGNAKLMAP 420 (598)
T ss_pred HHHHHHHHHHHHHHHc---cchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccc-cccccccCCCcceecch
Confidence 8899999999999998 999999999999995 333 688999998754322110000 01111223477788999
Q ss_pred CccCCC-------CCcccchhhHHHHHHHHHhCCCCCCCCCCCchhhhHHHHhcCChhhhhhcCCCCCCCCCCcHHHHHH
Q 005045 577 EHMNGQ-------VSILGDIYSYGILLLEMFTGKRPTGDMFKDDFSIHMFVSMALPDHVMDILDPSMPLDEENDEEQIEE 649 (717)
Q Consensus 577 E~~~~~-------~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 649 (717)
|+.... ...++|.|+.|.+.||++....||..-.+--.+...+ -...++.
T Consensus 421 Ei~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Y------------qe~qLPa----------- 477 (598)
T KOG4158|consen 421 EIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTY------------QESQLPA----------- 477 (598)
T ss_pred hhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheechhhh------------hhhhCCC-----------
Confidence 996532 2468999999999999999999997632211111100 0000110
Q ss_pred HHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCHHHHHHHH
Q 005045 650 VIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAMNVVVNNL 702 (717)
Q Consensus 650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~eil~~l 702 (717)
.++.|+..+.+++...++.+|.+|+|..=....+
T Consensus 478 -------------------lp~~vpp~~rqlV~~lL~r~pskRvsp~iAANvl 511 (598)
T KOG4158|consen 478 -------------------LPSRVPPVARQLVFDLLKRDPSKRVSPNIAANVL 511 (598)
T ss_pred -------------------CcccCChHHHHHHHHHhcCCccccCCccHHHhHH
Confidence 2234566778899999999999999876554443
No 439
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.77 E-value=7.7e-19 Score=196.77 Aligned_cols=203 Identities=22% Similarity=0.254 Sum_probs=154.6
Q ss_pred CcccccccccccccccccCcccccceEEEEeCCCchhhhHHhHhhhhhHHHHHHHHHHHHhcCC---CCceeEEEEeecc
Q 005045 380 SYSDISKSTDNFSKENLIGTGSFGSVYKGTLGDGTIVAIKVLKLQQQGALKSFIDECNALKSTR---HRNILRVITACSS 456 (717)
Q Consensus 380 s~~~~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~---h~ni~~~~~~~~~ 456 (717)
...+.......|.|.+.+|+|+||.||+|...+|+.||+|+=+.... -.|.--.+++.+++ -+-|..+..+
T Consensus 689 ~~~~~~~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~---WEfYI~~q~~~RLk~~~~~~~~~~~~a--- 762 (974)
T KOG1166|consen 689 PNTEFEVGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNP---WEFYICLQVMERLKPQMLPSIMHISSA--- 762 (974)
T ss_pred ccceeeecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCc---eeeeehHHHHHhhchhhhcchHHHHHH---
Confidence 34455566788999999999999999999977799999998764421 11111122333333 1122222222
Q ss_pred ccCCCCceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCC-
Q 005045 457 VDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDK- 535 (717)
Q Consensus 457 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~- 535 (717)
+...+..++|+||.+.|||.+++... +.+++..++.++.|+++.++.||.. +||||||||+|+|+..
T Consensus 763 --~~~~~~S~lv~ey~~~Gtlld~~N~~-------~~m~e~lv~~~~~qml~ive~lH~~---~IIHgDiKPDNfll~~~ 830 (974)
T KOG1166|consen 763 --HVFQNASVLVSEYSPYGTLLDLINTN-------KVMDEYLVMFFSCQMLRIVEHLHAM---GIIHGDIKPDNFLLRRE 830 (974)
T ss_pred --HccCCcceeeeeccccccHHHhhccC-------CCCCchhhhHHHHHHHHHHHHHHhc---ceecccCCcceeEeecc
Confidence 22334568999999999999999844 7799999999999999999999998 9999999999999953
Q ss_pred ------CCceEEeeeccchhcccccCCCCCCcceeecccccccccCCCccCCC-CCcccchhhHHHHHHHHHhCCCC
Q 005045 536 ------DMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNGQ-VSILGDIYSYGILLLEMFTGKRP 605 (717)
Q Consensus 536 ------~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~sDvwslG~vl~elltg~~p 605 (717)
...++|+|||.+..+... .+........+|-.+-.+|+..|+ |++.+|.|+++.++|-|+.|+.-
T Consensus 831 ~~~~~~~~~l~lIDfG~siDm~lf-----p~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~ 902 (974)
T KOG1166|consen 831 ICADSDSKGLYLIDFGRSIDMKLF-----PDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYM 902 (974)
T ss_pred cCCCCcccceEEEecccceeeeEc-----CCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHH
Confidence 337999999999776221 122344566788889999998876 89999999999999999999754
No 440
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.76 E-value=1.5e-18 Score=165.84 Aligned_cols=140 Identities=21% Similarity=0.190 Sum_probs=108.7
Q ss_pred cccccCcccccceEEEEeCCCchhhhHHhHhhhhh--------------------------HHHHHHHHHHHHhcCCCCc
Q 005045 393 KENLIGTGSFGSVYKGTLGDGTIVAIKVLKLQQQG--------------------------ALKSFIDECNALKSTRHRN 446 (717)
Q Consensus 393 ~~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~~--------------------------~~~~~~~e~~~l~~l~h~n 446 (717)
+...||+|++|.||+|...+|+.||+|++...... ....+..|.+.+.++.|++
T Consensus 1 ~~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 80 (190)
T cd05145 1 INGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAG 80 (190)
T ss_pred CCceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence 35789999999999999778999999998754210 0223467899999998888
Q ss_pred eeEEEEeeccccCCCCceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHh-cCCCCeeecC
Q 005045 447 ILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHH-HCDTPIAHCD 525 (717)
Q Consensus 447 i~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~-~~~~~ivH~d 525 (717)
+........ . ..++||||++|+++....... ..++...+..++.|++.++.++|+ . ||+|||
T Consensus 81 i~~p~~~~~----~---~~~lVmE~~~g~~~~~~~l~~-------~~~~~~~~~~i~~~l~~~l~~lH~~~---givHrD 143 (190)
T cd05145 81 VPVPEPILL----K---KNVLVMEFIGDDGSPAPRLKD-------VPLEEEEAEELYEQVVEQMRRLYQEA---GLVHGD 143 (190)
T ss_pred CCCceEEEe----c---CCEEEEEEecCCCchhhhhhh-------ccCCHHHHHHHHHHHHHHHHHHHHhC---CEecCC
Confidence 743333211 1 248999999887554332211 346788899999999999999999 7 999999
Q ss_pred CCCCCEEeCCCCceEEeeeccchhc
Q 005045 526 LKPSNVLLDKDMTAHVGDFGLAKFL 550 (717)
Q Consensus 526 lkp~NIll~~~~~~kl~Dfg~~~~~ 550 (717)
|||+||+++ ++.++|+|||++...
T Consensus 144 lkP~NIll~-~~~~~liDFG~a~~~ 167 (190)
T cd05145 144 LSEYNILYH-DGKPYIIDVSQAVEL 167 (190)
T ss_pred CChhhEEEE-CCCEEEEEcccceec
Confidence 999999998 899999999999865
No 441
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.75 E-value=8.8e-19 Score=172.80 Aligned_cols=209 Identities=22% Similarity=0.314 Sum_probs=130.8
Q ss_pred cccccccccccccCcccccceEEEEeC-CCchhhhHHhHhhh---hhHHHHHHHHHHHHhcCCC----------CceeEE
Q 005045 385 SKSTDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQ---QGALKSFIDECNALKSTRH----------RNILRV 450 (717)
Q Consensus 385 ~~~~~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h----------~ni~~~ 450 (717)
......+...+.||.|+++.||.+.+. +++.+|+|++.... ....+.+.+|.-....+.+ -.++..
T Consensus 8 ~~~~r~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P 87 (288)
T PF14531_consen 8 GQRPRTLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVP 87 (288)
T ss_dssp S--EEEEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---
T ss_pred CCCceEEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEee
Confidence 344556777889999999999999976 79999999886432 2234555555544444322 122222
Q ss_pred EEeecccc-------CCCCc-----eEEEEEecCCCCChhhhccC---CCCCcccccccCHHHHHHHHHHHHHHHHHHHh
Q 005045 451 ITACSSVD-------LEGND-----FKALVFEFMSNGNLDQWLHP---SPAEHYQFKKLSVIQRLNIAIDVASALDYLHH 515 (717)
Q Consensus 451 ~~~~~~~~-------~~~~~-----~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~ 515 (717)
++...... ..+.. ..+++|+-+ .++|.+++.. ... .........+..+..|+++.+++||+
T Consensus 88 ~d~~~i~~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~---~~~~l~~~arl~lT~Q~I~lvA~Lh~ 163 (288)
T PF14531_consen 88 LDLLRIPGKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQ---THSPLAFAARLSLTVQMIRLVANLHS 163 (288)
T ss_dssp SEEEEETTS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTT---TSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEcCCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhccc---ccchhHHHHHHHHHHHHHHHHHHHhh
Confidence 22221110 00011 236788877 5688777542 110 01234455567777999999999999
Q ss_pred cCCCCeeecCCCCCCEEeCCCCceEEeeeccchhcccccCCCCCCcceeecccccccccCCCccCC---------CCCcc
Q 005045 516 HCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNG---------QVSIL 586 (717)
Q Consensus 516 ~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~---------~~~~~ 586 (717)
. |+||+||+|+|++++++|.+.|+||+....... .... ...+..|.+||.... .++.+
T Consensus 164 ~---GlVHgdi~~~nfll~~~G~v~Lg~F~~~~r~g~---------~~~~-~~~~~~~~PPe~~~~~~~~~~~~~~~t~~ 230 (288)
T PF14531_consen 164 Y---GLVHGDIKPENFLLDQDGGVFLGDFSSLVRAGT---------RYRC-SEFPVAFTPPELESCAGQFGQNNAPYTFA 230 (288)
T ss_dssp T---TEEEST-SGGGEEE-TTS-EEE--GGGEEETTE---------EEEG-GGS-TTTS-HHHHHHHTSCHHSEEEE-HH
T ss_pred c---ceEecccceeeEEEcCCCCEEEcChHHHeecCc---------eeec-cCCCcccCChhhhhhhcccCcccceeeec
Confidence 8 999999999999999999999999988775411 1111 334577999998421 26889
Q ss_pred cchhhHHHHHHHHHhCCCCCCCCC
Q 005045 587 GDIYSYGILLLEMFTGKRPTGDMF 610 (717)
Q Consensus 587 sDvwslG~vl~elltg~~p~~~~~ 610 (717)
.|.|++|+++|.|.+|..||+...
T Consensus 231 ~DaW~LG~~ly~lWC~~lPf~~~~ 254 (288)
T PF14531_consen 231 TDAWQLGITLYSLWCGRLPFGLSS 254 (288)
T ss_dssp HHHHHHHHHHHHHHHSS-STCCCG
T ss_pred cCHHHHHHHHHHHHHccCCCCCCC
Confidence 999999999999999999998653
No 442
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.74 E-value=8.3e-19 Score=183.40 Aligned_cols=185 Identities=28% Similarity=0.351 Sum_probs=153.5
Q ss_pred cCcccccceEEEE----eCCCchhhhHHhHhhhh--hHHHHHHHHHHHHhcCC-CCceeEEEEeeccccCCCCceEEEEE
Q 005045 397 IGTGSFGSVYKGT----LGDGTIVAIKVLKLQQQ--GALKSFIDECNALKSTR-HRNILRVITACSSVDLEGNDFKALVF 469 (717)
Q Consensus 397 ig~g~~g~v~~~~----~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~-h~ni~~~~~~~~~~~~~~~~~~~lv~ 469 (717)
+|+|.+|.|+++. ...|+-+|+|+...... +.+.....|..++..++ ||.++++... ++.+...++++
T Consensus 2 lg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhya-----fqt~~kl~l~l 76 (612)
T KOG0603|consen 2 LGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYA-----FQTDGKLYLIL 76 (612)
T ss_pred CCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeee-----eccccchhHhh
Confidence 6899999999876 23678899998875421 11225567888888886 9999998877 55667899999
Q ss_pred ecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeeccchh
Q 005045 470 EFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKF 549 (717)
Q Consensus 470 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~ 549 (717)
++..||.+...+... ..+++.........++-|++++|+. +++|||+|++||+++.+|++++.|||.++.
T Consensus 77 d~~rgg~lft~l~~~-------~~f~~~~~~~~~aelaLald~lh~l---~iiyrd~k~enilld~~Ghi~~tdfglske 146 (612)
T KOG0603|consen 77 DFLRGGDLFTRLSKE-------VMFDELDVAFYLAELALALDHLHKL---GIAYRDYKLENVLLLLEGHIKLTDFGLSKE 146 (612)
T ss_pred hhcccchhhhccccC-------CchHHHHHHHHHHHHHHHHhhcchh---HHHHhcccccceeecccCccccCCchhhhH
Confidence 999998887777654 5678888888889999999999998 999999999999999999999999999987
Q ss_pred cccccCCCCCCcceeecccccccccCCCccCCCCCcccchhhHHHHHHHHHhCCCCCCC
Q 005045 550 LFEISDNPSKNQTVSIGLKGSIGYIPPEHMNGQVSILGDIYSYGILLLEMFTGKRPTGD 608 (717)
Q Consensus 550 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~sDvwslG~vl~elltg~~p~~~ 608 (717)
.... ...+||..|||||++. ....++|+||||++++||+||..||..
T Consensus 147 ~v~~-----------~~~cgt~eymApEI~~-gh~~a~D~ws~gvl~felltg~~pf~~ 193 (612)
T KOG0603|consen 147 AVKE-----------KIACGTYEYRAPEIIN-GHLSAADWWSFGVLAFELLTGTLPFGG 193 (612)
T ss_pred hHhh-----------hhcccchhhhhhHhhh-ccCCcccchhhhhhHHHHhhCCCCCch
Confidence 6211 1116899999999988 567899999999999999999999975
No 443
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.73 E-value=9e-18 Score=176.17 Aligned_cols=218 Identities=24% Similarity=0.322 Sum_probs=159.9
Q ss_pred HhcCCCCceeEEEEeeccccCCCCceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCC
Q 005045 439 LKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCD 518 (717)
Q Consensus 439 l~~l~h~ni~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~ 518 (717)
|+++.|.|+.++++.+... ...++|.+||..|+|.|.+.... ..+++.-...++++|+.||+|+|...
T Consensus 1 l~~l~h~n~~~f~g~~~~~-----~~~~~i~~~c~rGsl~D~i~~~~------~~~d~~F~~s~~rdi~~Gl~ylh~s~- 68 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDG-----PEMIVIWEYCSRGSLLDILSNED------IKLDYFFILSFIRDISKGLAYLHNSP- 68 (484)
T ss_pred CcccchhhhhhheeeEecC-----CceEEEEeeecCccHHhHHhccc------cCccHHHHHHHHHHHHHHHHHHhcCc-
Confidence 3578999999999997543 58899999999999999998643 56888889999999999999999972
Q ss_pred CCeeecCCCCCCEEeCCCCceEEeeeccchhcccccCCCCCCcceeecccccccccCCCccCCC--------CCcccchh
Q 005045 519 TPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNGQ--------VSILGDIY 590 (717)
Q Consensus 519 ~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--------~~~~sDvw 590 (717)
..+|+.++++|.+++....+|++|||+...... ..............-|.|||.+++. .+.++|||
T Consensus 69 -i~~hg~l~s~nClvd~~w~lklt~~Gl~~~~~~-----~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiY 142 (484)
T KOG1023|consen 69 -IGYHGALKSSNCLVDSRWVLKLTDFGLNSLLEE-----TAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIY 142 (484)
T ss_pred -ceeeeeeccccceeeeeEEEEechhhhcccccc-----cccccccchhHHHHhccCHHHhcccccccccccccccCCee
Confidence 339999999999999999999999999877532 1111111222355678999997653 46789999
Q ss_pred hHHHHHHHHHhCCCCCCCCCCCchhhhHHHHhcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhh
Q 005045 591 SYGILLLEMFTGKRPTGDMFKDDFSIHMFVSMALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKL 670 (717)
Q Consensus 591 slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 670 (717)
|||++++|+++.+.||+........ .+.+.. +.+...+.. .+... ..
T Consensus 143 s~~ii~~ei~~r~~~~~~~~~~~~~-~eii~~-----~~~~~~~~~------------------------rP~i~---~~ 189 (484)
T KOG1023|consen 143 SFGIIMYEILFRSGPFDLRNLVEDP-DEIILR-----VKKGGSNPF------------------------RPSIE---LL 189 (484)
T ss_pred hHHHHHHHHHhccCccccccccCCh-HHHHHH-----HHhcCCCCc------------------------Ccchh---hh
Confidence 9999999999999999875332221 111110 111000000 00000 11
Q ss_pred HHHHHHHHHHhhccCCCCcCCCCCHHHHHHHHHHHHH
Q 005045 671 EECFVSVLRIGLMCSTTSPRERIAMNVVVNNLKTIRN 707 (717)
Q Consensus 671 ~~~~~~l~~li~~cl~~~p~~Rps~~eil~~l~~i~~ 707 (717)
.+.+..+..++.+||..+|++||+++.|-..++.+..
T Consensus 190 ~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~ 226 (484)
T KOG1023|consen 190 NELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTINK 226 (484)
T ss_pred hhcchHHHHHHHHhcccChhhCccHHHHHhhhhhhcc
Confidence 1335578899999999999999999999998887765
No 444
>PRK10345 hypothetical protein; Provisional
Probab=99.69 E-value=1.1e-16 Score=153.21 Aligned_cols=139 Identities=19% Similarity=0.258 Sum_probs=104.6
Q ss_pred cccccccCcccccceEEEEeC-CCchhhhHHhHhhhhhHHHHHHHHHHHHhcC-----CCCceeEEEEeeccccCCCCce
Q 005045 391 FSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQQGALKSFIDECNALKST-----RHRNILRVITACSSVDLEGNDF 464 (717)
Q Consensus 391 y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-----~h~ni~~~~~~~~~~~~~~~~~ 464 (717)
+.-.+.||+|+++.||. ++ ++.. +||+.........+.+.+|+++++++ .||||+++++++.... ..+.
T Consensus 4 L~~~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~--g~g~ 78 (210)
T PRK10345 4 LSEQSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDC--GTGY 78 (210)
T ss_pred cCCcceecCCCceEEEE--CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCC--CCeE
Confidence 34467899999999995 44 4444 68887765444557789999999999 5799999999864421 1123
Q ss_pred -EEEEEec--CCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHH-HHHHhcCCCCeeecCCCCCCEEeCC----C
Q 005045 465 -KALVFEF--MSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASAL-DYLHHHCDTPIAHCDLKPSNVLLDK----D 536 (717)
Q Consensus 465 -~~lv~e~--~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l-~~LH~~~~~~ivH~dlkp~NIll~~----~ 536 (717)
..+|+|| +++++|.+++... .+++. ..++.+++.++ +|||++ +|+||||||+||+++. +
T Consensus 79 v~~~I~e~~G~~~~tL~~~l~~~--------~~~e~--~~~~~~~L~~l~~yLh~~---~IvhrDlKp~NILl~~~~~~~ 145 (210)
T PRK10345 79 VYDVIADFDGKPSITLTEFAEQC--------RYEED--VAQLRQLLKKLKRYLLDN---RIVTMELKPQNILCQRISESE 145 (210)
T ss_pred EEEEEecCCCCcchhHHHHHHcc--------cccHh--HHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEeccCCCC
Confidence 4488999 5579999999643 24444 35678888777 999998 9999999999999974 3
Q ss_pred CceEEeeeccc
Q 005045 537 MTAHVGDFGLA 547 (717)
Q Consensus 537 ~~~kl~Dfg~~ 547 (717)
+.++|+||+.+
T Consensus 146 ~~~~LiDg~G~ 156 (210)
T PRK10345 146 VIPVVCDNIGE 156 (210)
T ss_pred CcEEEEECCCC
Confidence 38999995544
No 445
>smart00090 RIO RIO-like kinase.
Probab=99.68 E-value=9.2e-17 Score=157.91 Aligned_cols=144 Identities=19% Similarity=0.136 Sum_probs=112.3
Q ss_pred cccccccccccCcccccceEEEE--eCCCchhhhHHhHhhhh------------------------hHHHHHHHHHHHHh
Q 005045 387 STDNFSKENLIGTGSFGSVYKGT--LGDGTIVAIKVLKLQQQ------------------------GALKSFIDECNALK 440 (717)
Q Consensus 387 ~~~~y~~~~~ig~g~~g~v~~~~--~~~~~~vavK~~~~~~~------------------------~~~~~~~~e~~~l~ 440 (717)
...-|.+.+.||+|++|.||.|. ..+|+.||+|++..... .....+..|+++++
T Consensus 26 ~~~~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~ 105 (237)
T smart00090 26 RGILSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQ 105 (237)
T ss_pred cCchHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHH
Confidence 34468899999999999999998 45899999998864321 01234678999999
Q ss_pred cCCC--CceeEEEEeeccccCCCCceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCC
Q 005045 441 STRH--RNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCD 518 (717)
Q Consensus 441 ~l~h--~ni~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~ 518 (717)
++.+ ..++++++. ...++||||++|.++..+.... .......+..++.||+.++.+||+.
T Consensus 106 ~L~~~~i~~p~~~~~---------~~~~lV~E~~~g~~L~~~~~~~-------~~~~~~~~~~i~~qi~~~l~~LH~~-- 167 (237)
T smart00090 106 RLYEAGVPVPKPIAW---------RRNVLVMEFIGGDGLPAPRLKD-------VEPEEEEEFELYDDILEEMRKLYKE-- 167 (237)
T ss_pred HHHhcCCCCCeeeEe---------cCceEEEEEecCCccccccccc-------CCcchHHHHHHHHHHHHHHHHHHhc--
Confidence 9965 334444443 1248999999988887655322 2345566789999999999999998
Q ss_pred CC-eeecCCCCCCEEeCCCCceEEeeeccchhc
Q 005045 519 TP-IAHCDLKPSNVLLDKDMTAHVGDFGLAKFL 550 (717)
Q Consensus 519 ~~-ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~ 550 (717)
+ ++||||||+||+++ ++.++|+|||.+...
T Consensus 168 -g~iiH~Dikp~NIli~-~~~i~LiDFg~a~~~ 198 (237)
T smart00090 168 -GELVHGDLSEYNILVH-DGKVVIIDVSQSVEL 198 (237)
T ss_pred -CCEEeCCCChhhEEEE-CCCEEEEEChhhhcc
Confidence 8 99999999999999 889999999988754
No 446
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.65 E-value=4.3e-17 Score=167.37 Aligned_cols=128 Identities=27% Similarity=0.466 Sum_probs=105.9
Q ss_pred ceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEe
Q 005045 463 DFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVG 542 (717)
Q Consensus 463 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~ 542 (717)
...||.|++|...+|.+|+.+.+. ...-++.....++.|++.|++| . +.+|+|+||.||+...+.++||.
T Consensus 329 ~~lyI~Mn~c~~~tledWl~rr~~----~e~~s~s~~~~~~~q~~~~~~y---k---~~ihrdlkp~nif~~~d~q~kIg 398 (516)
T KOG1033|consen 329 VYLYIQMNLCEKETLEDWLRRRRT----GEERSLSLMLDIFKQIAPAVEY---K---GLIHRDLKPSNIFFSDDDQLKIG 398 (516)
T ss_pred cchhhhhhhhhhhhHHHHhhCCCc----ccccchhHHHHHHHhhccchhh---c---cchhhhccccccccccchhhhhh
Confidence 358899999999999999975542 2556888899999999999999 3 89999999999999999999999
Q ss_pred eeccchhcccccCCCCCCcceeecccccccccCCCccCCC-CCcccchhhHHHHHHHHHh
Q 005045 543 DFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNGQ-VSILGDIYSYGILLLEMFT 601 (717)
Q Consensus 543 Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~sDvwslG~vl~ellt 601 (717)
|||+........ .............||..||+||.+.|+ |+.++||||||++++|++.
T Consensus 399 DFgl~ts~~~~~-~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~ 457 (516)
T KOG1033|consen 399 DFGLVTSQDKDE-TVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLI 457 (516)
T ss_pred hhhheeecccCC-cccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHH
Confidence 999987653222 111122333456799999999999875 9999999999999999996
No 447
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.64 E-value=1.4e-16 Score=174.99 Aligned_cols=176 Identities=28% Similarity=0.362 Sum_probs=124.7
Q ss_pred cccccccccccccccCcccccceEEEEeC-CCchhhhHHhHhhhhhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCC
Q 005045 383 DISKSTDNFSKENLIGTGSFGSVYKGTLG-DGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRVITACSSVDLEG 461 (717)
Q Consensus 383 ~~~~~~~~y~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~ 461 (717)
.-.....+|..++.|..|++|.||.++++ +.+++|+|+ +.+.. +++ ||..+.+.
T Consensus 77 ~~~p~e~df~~IklisngAygavylvrh~~trqrfa~ki-Nkq~l-----------ilR-----nilt~a~n-------- 131 (1205)
T KOG0606|consen 77 RRAPSESDFNTIKLISNGAYGAVYLVRHKETRQRFAMKI-NKQNL-----------ILR-----NILTFAGN-------- 131 (1205)
T ss_pred ccCCCccccceeEeeccCCCCceeeeeccccccchhhcc-cccch-----------hhh-----ccccccCC--------
Confidence 44556789999999999999999999977 678898843 32110 111 23333222
Q ss_pred CceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEE
Q 005045 462 NDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHV 541 (717)
Q Consensus 462 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl 541 (717)
.++| |+-...++.- +.++.. ++.+++|+|+- ||||||+||+|.+|+.-|++|+
T Consensus 132 ---pfvv------gDc~tllk~~-------g~lPvd--------mvla~Eylh~y---givhrdlkpdnllIT~mGhiKl 184 (1205)
T KOG0606|consen 132 ---PFVV------GDCATLLKNI-------GPLPVD--------MVLAVEYLHSY---GIVHRDLKPDNLLITSMGHIKL 184 (1205)
T ss_pred ---ccee------chhhhhcccC-------CCCcch--------hhHHhHhhccC---CeecCCCCCCcceeeecccccc
Confidence 2233 3333333322 233332 37899999997 9999999999999999999999
Q ss_pred eeeccchhcccccCC--------CCCCcceeecccccccccCCCcc-CCCCCcccchhhHHHHHHHHHhCCCCCCCCC
Q 005045 542 GDFGLAKFLFEISDN--------PSKNQTVSIGLKGSIGYIPPEHM-NGQVSILGDIYSYGILLLEMFTGKRPTGDMF 610 (717)
Q Consensus 542 ~Dfg~~~~~~~~~~~--------~~~~~~~~~~~~~~~~y~aPE~~-~~~~~~~sDvwslG~vl~elltg~~p~~~~~ 610 (717)
+|||+++........ ........+...||+.|.|||++ ...|+..+|+|++|+++||.+.|.+||.+..
T Consensus 185 TDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdt 262 (1205)
T KOG0606|consen 185 TDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDT 262 (1205)
T ss_pred cchhhhhhhhhhccchhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCC
Confidence 999998765321111 11112333456799999999995 5569999999999999999999999997653
No 448
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.61 E-value=1.3e-15 Score=146.90 Aligned_cols=136 Identities=24% Similarity=0.196 Sum_probs=107.0
Q ss_pred ccccccccCcccccceEEEEeCCCchhhhHHhHhhhh----------------------hHHHHHHHHHHHHhcCCCCc-
Q 005045 390 NFSKENLIGTGSFGSVYKGTLGDGTIVAIKVLKLQQQ----------------------GALKSFIDECNALKSTRHRN- 446 (717)
Q Consensus 390 ~y~~~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~----------------------~~~~~~~~e~~~l~~l~h~n- 446 (717)
-|.+.+.||+|++|.||.|..++|+.||+|++..... .....+..|+.++..+.|++
T Consensus 16 ~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 95 (198)
T cd05144 16 VESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGF 95 (198)
T ss_pred hhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCC
Confidence 4888999999999999999988899999997543210 11224677888999887774
Q ss_pred -eeEEEEeeccccCCCCceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecC
Q 005045 447 -ILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCD 525 (717)
Q Consensus 447 -i~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~d 525 (717)
++..++. ...++||||++|+++.+.... .....++.+++.++.++|+. +++|||
T Consensus 96 ~v~~~~~~---------~~~~lv~e~~~g~~L~~~~~~-------------~~~~~~~~~i~~~l~~lh~~---gi~H~D 150 (198)
T cd05144 96 PVPKPIDW---------NRHAVVMEYIDGVELYRVRVL-------------EDPEEVLDEILEEIVKAYKH---GIIHGD 150 (198)
T ss_pred CCCceeec---------CCceEEEEEeCCcchhhcccc-------------ccHHHHHHHHHHHHHHHHHC---CCCcCC
Confidence 4444332 245899999999988765421 23457889999999999997 999999
Q ss_pred CCCCCEEeCCCCceEEeeeccchhc
Q 005045 526 LKPSNVLLDKDMTAHVGDFGLAKFL 550 (717)
Q Consensus 526 lkp~NIll~~~~~~kl~Dfg~~~~~ 550 (717)
|+|+||+++.++.++|+|||.+...
T Consensus 151 l~p~Nill~~~~~~~liDfg~~~~~ 175 (198)
T cd05144 151 LSEFNILVDDDEKIYIIDWPQMVST 175 (198)
T ss_pred CCcccEEEcCCCcEEEEECCccccC
Confidence 9999999999999999999998654
No 449
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.60 E-value=1.5e-15 Score=148.35 Aligned_cols=134 Identities=22% Similarity=0.311 Sum_probs=107.4
Q ss_pred cccCcccccceEEEEeCCCchhhhHHhHhhh--------hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceEE
Q 005045 395 NLIGTGSFGSVYKGTLGDGTIVAIKVLKLQQ--------QGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFKA 466 (717)
Q Consensus 395 ~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~--------~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~ 466 (717)
+.||+|++|.||.|.+ .|..+++|+..... .....++.+|++++..+.|+++.....++. .....+
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~-----~~~~~~ 75 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFV-----DPENFI 75 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEE-----eCCCCE
Confidence 5789999999999987 67788888754321 112356788999999998888765544432 223578
Q ss_pred EEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeecc
Q 005045 467 LVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGL 546 (717)
Q Consensus 467 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~ 546 (717)
++|||++|++|.+++... .. .+..++.+++.++.++|+. +++|||++|.||+++ ++.++++|||.
T Consensus 76 lv~e~~~G~~L~~~~~~~----------~~-~~~~i~~~i~~~l~~lH~~---~i~H~Dl~p~Nil~~-~~~~~liDf~~ 140 (211)
T PRK14879 76 IVMEYIEGEPLKDLINSN----------GM-EELELSREIGRLVGKLHSA---GIIHGDLTTSNMILS-GGKIYLIDFGL 140 (211)
T ss_pred EEEEEeCCcCHHHHHHhc----------cH-HHHHHHHHHHHHHHHHHhC---CcccCCCCcccEEEE-CCCEEEEECCc
Confidence 999999999999988633 11 7789999999999999998 999999999999999 78999999998
Q ss_pred chh
Q 005045 547 AKF 549 (717)
Q Consensus 547 ~~~ 549 (717)
+..
T Consensus 141 a~~ 143 (211)
T PRK14879 141 AEF 143 (211)
T ss_pred ccC
Confidence 763
No 450
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.55 E-value=1.9e-16 Score=162.52 Aligned_cols=180 Identities=26% Similarity=0.426 Sum_probs=145.1
Q ss_pred CCCCCEEeccCccccccCCCCccCCCCCCeeeccccccCCcccCchhhhhhhccCCCCCEEEeecCcccCcCchhhhhcc
Q 005045 178 ASNLQVLDFAENGLTGTIPGNFGSLKDLVRLNFDQNELGSREIGDLNFLKFLANCTSLEVLGLARNSFGGEMPISIANLS 257 (717)
Q Consensus 178 l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~ 257 (717)
+.--...||+.|++. .+|..++.+-.|..+.|..|.+..++ ..+.++..|..|+|+.|++. .+|..++.+
T Consensus 74 ltdt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r~ip-------~~i~~L~~lt~l~ls~NqlS-~lp~~lC~l- 143 (722)
T KOG0532|consen 74 LTDTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIRTIP-------EAICNLEALTFLDLSSNQLS-HLPDGLCDL- 143 (722)
T ss_pred ccchhhhhccccccc-cCchHHHHHHHHHHHHHHhccceecc-------hhhhhhhHHHHhhhccchhh-cCChhhhcC-
Confidence 344455677777777 77777777777777788888777763 56777788888888888888 888888887
Q ss_pred ccccEEecCCCccCCCCCccccCCCCCCEEEccCCcCccccchhhhcCCCCCeEEcccCcCCCCCCcccccccccceeec
Q 005045 258 THLRRLTMGENLMHGNIPVGIGNLVNLNLLGLEGNNLSGSVPEVIGRLNKLEGLGLNVNKFSGLIPSSLGNLTILTRLWM 337 (717)
Q Consensus 258 ~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 337 (717)
-|+.|-+++|+++ .+|..++.+..|..||.+.|.+. .+|..++++.+|+.|.+..|.+... |+.++.| .|..||+
T Consensus 144 -pLkvli~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~~l-p~El~~L-pLi~lDf 218 (722)
T KOG0532|consen 144 -PLKVLIVSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLEDL-PEELCSL-PLIRLDF 218 (722)
T ss_pred -cceeEEEecCccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhhhC-CHHHhCC-ceeeeec
Confidence 4888888888887 67888888888999999999988 7888889999999999999998854 6667765 4888999
Q ss_pred ccccccccCCcCccCcCCCceEEeecccCCCCCCccc
Q 005045 338 EENRLEGSIPPSLGNCQKLLVLNLSSNDLNGTIPKEV 374 (717)
Q Consensus 338 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~ 374 (717)
+.|+++ .+|..|.+|+.|++|-|.+|||+ +.|+.+
T Consensus 219 ScNkis-~iPv~fr~m~~Lq~l~LenNPLq-SPPAqI 253 (722)
T KOG0532|consen 219 SCNKIS-YLPVDFRKMRHLQVLQLENNPLQ-SPPAQI 253 (722)
T ss_pred ccCcee-ecchhhhhhhhheeeeeccCCCC-CChHHH
Confidence 999998 89999999999999999999998 556654
No 451
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.55 E-value=8.2e-15 Score=141.65 Aligned_cols=130 Identities=23% Similarity=0.327 Sum_probs=101.0
Q ss_pred ccCcccccceEEEEeCCCchhhhHHhHhhh--------hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceEEE
Q 005045 396 LIGTGSFGSVYKGTLGDGTIVAIKVLKLQQ--------QGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFKAL 467 (717)
Q Consensus 396 ~ig~g~~g~v~~~~~~~~~~vavK~~~~~~--------~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~l 467 (717)
.||+|++|.||+|.+ .|+.+++|...... .....++.+|++++..+.|+++......+. .....++
T Consensus 1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~-----~~~~~~l 74 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDV-----DPDNKTI 74 (199)
T ss_pred CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE-----ECCCCEE
Confidence 479999999999985 57788998854321 112466788999999998776433332221 1235689
Q ss_pred EEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeeccc
Q 005045 468 VFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLA 547 (717)
Q Consensus 468 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~ 547 (717)
||||++|++|.+++.... . .++.+++.++.++|+. +++|||++|.||+++ ++.++++|||.+
T Consensus 75 v~e~~~g~~l~~~~~~~~-------~-------~~~~~i~~~l~~lH~~---gi~H~Dl~~~Nil~~-~~~~~liDfg~a 136 (199)
T TIGR03724 75 VMEYIEGKPLKDVIEEGN-------D-------ELLREIGRLVGKLHKA---GIVHGDLTTSNIIVR-DDKLYLIDFGLG 136 (199)
T ss_pred EEEEECCccHHHHHhhcH-------H-------HHHHHHHHHHHHHHHC---CeecCCCCcceEEEE-CCcEEEEECCCC
Confidence 999999999998875321 1 7899999999999997 999999999999999 889999999987
Q ss_pred hh
Q 005045 548 KF 549 (717)
Q Consensus 548 ~~ 549 (717)
..
T Consensus 137 ~~ 138 (199)
T TIGR03724 137 KY 138 (199)
T ss_pred cC
Confidence 64
No 452
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.55 E-value=3.7e-16 Score=160.46 Aligned_cols=213 Identities=29% Similarity=0.434 Sum_probs=168.3
Q ss_pred EEEccCccccccCCccc--cCCCCCCEEeccCCcCcccCChhhhccCCCCeEeccCCCCCCCCCccccCCCCccEEEccc
Q 005045 62 IIGLGGSNLTGNVPAWI--GNFSSLKALSLAWNNLRGSIPNELGQLSGLGFFTLYGNFISGIIPSSIYNISSIYYFSVTQ 139 (717)
Q Consensus 62 ~L~L~~n~l~~~~p~~~--~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~ 139 (717)
.|.|++-++. ..|..- ..+.--...||+.|+.. .+|..++.+..|+.|.|++|.|. .+|..++++..|++|||+.
T Consensus 54 ~l~Ls~rrlk-~fpr~a~~~~ltdt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~ 130 (722)
T KOG0532|consen 54 RLLLSGRRLK-EFPRGAASYDLTDTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSS 130 (722)
T ss_pred ccccccchhh-cCCCccccccccchhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhcc
Confidence 4566666666 344321 34555678899999998 88988999999999999999998 7888999999999999999
Q ss_pred CcccccCCcccccCCCCcceeecccccccccCCccCCCCCCCCEEeccCccccccCCCCccCCCCCCeeeccccccCCcc
Q 005045 140 NQLHGQLPTDVGLTLPNLKIFAGAVNYFTGSIPVSLSNASNLQVLDFAENGLTGTIPGNFGSLKDLVRLNFDQNELGSRE 219 (717)
Q Consensus 140 N~l~~~l~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~ 219 (717)
|+++ .+|..++ .+ -|+.|-+++|+++ .+|..++.++.|..|+.+.|.+..+
T Consensus 131 NqlS-~lp~~lC-------------------------~l-pLkvli~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~sl- 181 (722)
T KOG0532|consen 131 NQLS-HLPDGLC-------------------------DL-PLKVLIVSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQSL- 181 (722)
T ss_pred chhh-cCChhhh-------------------------cC-cceeEEEecCccc-cCCcccccchhHHHhhhhhhhhhhc-
Confidence 9998 6666554 22 2777888888888 6777777778888888888888776
Q ss_pred cCchhhhhhhccCCCCCEEEeecCcccCcCchhhhhccccccEEecCCCccCCCCCccccCCCCCCEEEccCCcCccccc
Q 005045 220 IGDLNFLKFLANCTSLEVLGLARNSFGGEMPISIANLSTHLRRLTMGENLMHGNIPVGIGNLVNLNLLGLEGNNLSGSVP 299 (717)
Q Consensus 220 ~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 299 (717)
+..+.++.+|+.|.+..|++. .+|..+..+ .|..||+|.|++. .+|..|.+|..|++|-|.+|.++ ..|
T Consensus 182 ------psql~~l~slr~l~vrRn~l~-~lp~El~~L--pLi~lDfScNkis-~iPv~fr~m~~Lq~l~LenNPLq-SPP 250 (722)
T KOG0532|consen 182 ------PSQLGYLTSLRDLNVRRNHLE-DLPEELCSL--PLIRLDFSCNKIS-YLPVDFRKMRHLQVLQLENNPLQ-SPP 250 (722)
T ss_pred ------hHHhhhHHHHHHHHHhhhhhh-hCCHHHhCC--ceeeeecccCcee-ecchhhhhhhhheeeeeccCCCC-CCh
Confidence 456788888888888888888 888888876 6999999999998 78999999999999999999998 777
Q ss_pred hhhhcCCC---CCeEEcccCc
Q 005045 300 EVIGRLNK---LEGLGLNVNK 317 (717)
Q Consensus 300 ~~~~~l~~---L~~L~Ls~N~ 317 (717)
..++-.-+ -++|+..-++
T Consensus 251 AqIC~kGkVHIFKyL~~qA~q 271 (722)
T KOG0532|consen 251 AQICEKGKVHIFKYLSTQACQ 271 (722)
T ss_pred HHHHhccceeeeeeecchhcc
Confidence 76664333 3566666664
No 453
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.54 E-value=1.5e-14 Score=160.79 Aligned_cols=140 Identities=22% Similarity=0.283 Sum_probs=108.5
Q ss_pred cccccccccccccCcccccceEEEEeCCCchhhhHHhHh--------hhhhHHHHHHHHHHHHhcCCCCceeEEEEeecc
Q 005045 385 SKSTDNFSKENLIGTGSFGSVYKGTLGDGTIVAIKVLKL--------QQQGALKSFIDECNALKSTRHRNILRVITACSS 456 (717)
Q Consensus 385 ~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~vavK~~~~--------~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~ 456 (717)
......|...+.||+|+||.||+|.+... .+++|+... .......++.+|+++++.++|++++....++..
T Consensus 329 ~~~~~~~~~~~~iG~G~~g~Vy~~~~~~~-~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~ 407 (535)
T PRK09605 329 EEVKRRKIPDHLIGKGAEADIKKGEYLGR-DAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVD 407 (535)
T ss_pred cccccccCccceeccCCcEEEEEEeecCc-cceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEe
Confidence 33445567789999999999999986533 333332211 111234678899999999999998876655432
Q ss_pred ccCCCCceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCC
Q 005045 457 VDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKD 536 (717)
Q Consensus 457 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~ 536 (717)
....++||||++|++|.+++. ....++.+++.++.+||+. +++||||||+||++ .+
T Consensus 408 -----~~~~~lv~E~~~g~~L~~~l~---------------~~~~~~~~i~~~L~~lH~~---giiHrDlkp~NILl-~~ 463 (535)
T PRK09605 408 -----PEEKTIVMEYIGGKDLKDVLE---------------GNPELVRKVGEIVAKLHKA---GIVHGDLTTSNFIV-RD 463 (535)
T ss_pred -----CCCCEEEEEecCCCcHHHHHH---------------HHHHHHHHHHHHHHHHHhC---CCccCCCChHHEEE-EC
Confidence 235689999999999988774 2467899999999999998 99999999999999 67
Q ss_pred CceEEeeeccchh
Q 005045 537 MTAHVGDFGLAKF 549 (717)
Q Consensus 537 ~~~kl~Dfg~~~~ 549 (717)
+.++|+|||.++.
T Consensus 464 ~~~~liDFGla~~ 476 (535)
T PRK09605 464 DRLYLIDFGLGKY 476 (535)
T ss_pred CcEEEEeCccccc
Confidence 8999999999874
No 454
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.51 E-value=2.9e-14 Score=153.43 Aligned_cols=200 Identities=29% Similarity=0.448 Sum_probs=135.0
Q ss_pred EEECCCCcccccCCcCCCCCCCCCEEEccCccccccCCccccCCC-CCCEEeccCCcCcccCChhhhccCCCCeEeccCC
Q 005045 38 SFEASVNDFVGQIPNQLSSLTKLEIIGLGGSNLTGNVPAWIGNFS-SLKALSLAWNNLRGSIPNELGQLSGLGFFTLYGN 116 (717)
Q Consensus 38 ~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~-~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N 116 (717)
.++++.|.+. .....+..++.++.|++.+|.++ .+|.....+. +|+.|++++|++. .+|..+..+++|+.|++++|
T Consensus 97 ~l~~~~~~~~-~~~~~~~~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N 173 (394)
T COG4886 97 SLDLNLNRLR-SNISELLELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFN 173 (394)
T ss_pred eeeccccccc-cCchhhhcccceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCc
Confidence 5677777664 23333555677777778777777 5666566664 7778888888777 55566777777888888888
Q ss_pred CCCCCCCccccCCCCccEEEcccCcccccCCcccccCCCCcceeecccccccccCCccCCCCCCCCEEeccCccccccCC
Q 005045 117 FISGIIPSSIYNISSIYYFSVTQNQLHGQLPTDVGLTLPNLKIFAGAVNYFTGSIPVSLSNASNLQVLDFAENGLTGTIP 196 (717)
Q Consensus 117 ~i~~~~~~~~~~l~~L~~L~L~~N~l~~~l~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 196 (717)
++. ..|...+.++.|+.|++++|+++ .+|.... .+..|+.|.+++|.+. ..+..+..+.++..|.+.+|++. ..+
T Consensus 174 ~l~-~l~~~~~~~~~L~~L~ls~N~i~-~l~~~~~-~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~-~~~ 248 (394)
T COG4886 174 DLS-DLPKLLSNLSNLNNLDLSGNKIS-DLPPEIE-LLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLE-DLP 248 (394)
T ss_pred hhh-hhhhhhhhhhhhhheeccCCccc-cCchhhh-hhhhhhhhhhcCCcce-ecchhhhhcccccccccCCceee-ecc
Confidence 777 45555557777777788888777 6666541 3445777777777433 35556777777777777777776 445
Q ss_pred CCccCCCCCCeeeccccccCCcccCchhhhhhhccCCCCCEEEeecCcccCcCchhh
Q 005045 197 GNFGSLKDLVRLNFDQNELGSREIGDLNFLKFLANCTSLEVLGLARNSFGGEMPISI 253 (717)
Q Consensus 197 ~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~ 253 (717)
..+..+++++.|++++|.++.++ . +..+.+|+.|++++|.+....|...
T Consensus 249 ~~~~~l~~l~~L~~s~n~i~~i~------~--~~~~~~l~~L~~s~n~~~~~~~~~~ 297 (394)
T COG4886 249 ESIGNLSNLETLDLSNNQISSIS------S--LGSLTNLRELDLSGNSLSNALPLIA 297 (394)
T ss_pred chhccccccceeccccccccccc------c--ccccCccCEEeccCccccccchhhh
Confidence 66667777777777777777764 2 6666777777777777774444443
No 455
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.51 E-value=2.3e-14 Score=154.19 Aligned_cols=193 Identities=34% Similarity=0.473 Sum_probs=93.4
Q ss_pred EEeccCCcCcccCChhhhccCCCCeEeccCCCCCCCCCccccCCC-CccEEEcccCcccccCCcccccCCCCcceeeccc
Q 005045 86 ALSLAWNNLRGSIPNELGQLSGLGFFTLYGNFISGIIPSSIYNIS-SIYYFSVTQNQLHGQLPTDVGLTLPNLKIFAGAV 164 (717)
Q Consensus 86 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~-~L~~L~L~~N~l~~~l~~~~~~~l~~L~~L~l~~ 164 (717)
.|+++.|.+. .....+..++.++.|++.+|.++ .++.....++ +|+.|++++|++. .+|..+. .+++|+.|++++
T Consensus 97 ~l~~~~~~~~-~~~~~~~~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~-~l~~L~~L~l~~ 172 (394)
T COG4886 97 SLDLNLNRLR-SNISELLELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLR-NLPNLKNLDLSF 172 (394)
T ss_pred eeeccccccc-cCchhhhcccceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhh-ccccccccccCC
Confidence 5667777664 33444555566777777777777 4444455553 6777777777776 4442222 344444444444
Q ss_pred ccccccCCccCCCCCCCCEEeccCccccccCCCCccCCCCCCeeeccccccCCcccCchhhhhhhccCCCCCEEEeecCc
Q 005045 165 NYFTGSIPVSLSNASNLQVLDFAENGLTGTIPGNFGSLKDLVRLNFDQNELGSREIGDLNFLKFLANCTSLEVLGLARNS 244 (717)
Q Consensus 165 n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~ 244 (717)
|++. .+|.....++.|+.|++++|+++ .+|........|++|.+++|.+... +..+.++.++..|.+.+|+
T Consensus 173 N~l~-~l~~~~~~~~~L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~~~-------~~~~~~~~~l~~l~l~~n~ 243 (394)
T COG4886 173 NDLS-DLPKLLSNLSNLNNLDLSGNKIS-DLPPEIELLSALEELDLSNNSIIEL-------LSSLSNLKNLSGLELSNNK 243 (394)
T ss_pred chhh-hhhhhhhhhhhhhheeccCCccc-cCchhhhhhhhhhhhhhcCCcceec-------chhhhhcccccccccCCce
Confidence 4444 22222224455555555555555 4444333334455555555532221 2234444444444455554
Q ss_pred ccCcCchhhhhccccccEEecCCCccCCCCCccccCCCCCCEEEccCCcCc
Q 005045 245 FGGEMPISIANLSTHLRRLTMGENLMHGNIPVGIGNLVNLNLLGLEGNNLS 295 (717)
Q Consensus 245 l~~~~p~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 295 (717)
+. .++..+..+ .+++.|++++|.++.... +..+.+|+.|++++|.+.
T Consensus 244 ~~-~~~~~~~~l-~~l~~L~~s~n~i~~i~~--~~~~~~l~~L~~s~n~~~ 290 (394)
T COG4886 244 LE-DLPESIGNL-SNLETLDLSNNQISSISS--LGSLTNLRELDLSGNSLS 290 (394)
T ss_pred ee-eccchhccc-cccceecccccccccccc--ccccCccCEEeccCcccc
Confidence 44 223333333 234444444444442221 444444444444444444
No 456
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.51 E-value=2.1e-15 Score=166.52 Aligned_cols=256 Identities=23% Similarity=0.273 Sum_probs=186.0
Q ss_pred cccccccccccCcccccceEEEEeC--CCchhhhHHhHhhh--hhHHHHHHHHHHHHhcCC-CCceeEEEEeeccccCCC
Q 005045 387 STDNFSKENLIGTGSFGSVYKGTLG--DGTIVAIKVLKLQQ--QGALKSFIDECNALKSTR-HRNILRVITACSSVDLEG 461 (717)
Q Consensus 387 ~~~~y~~~~~ig~g~~g~v~~~~~~--~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~-h~ni~~~~~~~~~~~~~~ 461 (717)
+...|.+.+.+|+|+++.|-.+... ....+|+|.+.... .....+...|..+-+.+. |+|++.+++. ..+
T Consensus 18 ~~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~-----~~~ 92 (601)
T KOG0590|consen 18 PNSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEP-----SSS 92 (601)
T ss_pred ccccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCc-----cCC
Confidence 5678899999999999998887743 33445556555432 223445556777777776 9999999998 455
Q ss_pred CceEEEEEecCCCCChhhhc-cCCCCCcccccccCHHHHHHHHHHHHHHHHHHH-hcCCCCeeecCCCCCCEEeCCCC-c
Q 005045 462 NDFKALVFEFMSNGNLDQWL-HPSPAEHYQFKKLSVIQRLNIAIDVASALDYLH-HHCDTPIAHCDLKPSNVLLDKDM-T 538 (717)
Q Consensus 462 ~~~~~lv~e~~~~~~L~~~l-~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH-~~~~~~ivH~dlkp~NIll~~~~-~ 538 (717)
....++++++..|+++.+.+ .... ...+...+...+.|+..++.|+| .. +++|+||||+|.+++..+ .
T Consensus 93 ~~~~~~~~~~s~g~~~f~~i~~~~~------~~~~~~~~~~~~~ql~s~l~~~H~~~---~~~h~~ikP~n~~l~~s~~~ 163 (601)
T KOG0590|consen 93 PRSYLLSLSYSDGGSLFSKISHPDS------TGTSSSSASRYLPQLNSGLSYLHPEN---GVTHRDIKPSNSLLDESGSA 163 (601)
T ss_pred CcccccccCcccccccccccccCCc------cCCCCcchhhhhhhhccCccccCccc---ccccCCCCCccchhccCCCc
Confidence 56899999999999998887 4321 24566677889999999999999 65 999999999999999999 9
Q ss_pred eEEeeeccchhcccccCCCCCCcceeecccc-cccccCCCccCCC--CCcccchhhHHHHHHHHHhCCCCCCCCCCCchh
Q 005045 539 AHVGDFGLAKFLFEISDNPSKNQTVSIGLKG-SIGYIPPEHMNGQ--VSILGDIYSYGILLLEMFTGKRPTGDMFKDDFS 615 (717)
Q Consensus 539 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~-~~~y~aPE~~~~~--~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~ 615 (717)
.+++|||.|..+... ...........| ++.|+|||...++ ..+..|+||.|+++.-+++|..|+.........
T Consensus 164 l~~~df~~At~~~~~----~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~ 239 (601)
T KOG0590|consen 164 LKIADFGLATAYRNK----NGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGR 239 (601)
T ss_pred ccCCCchhhcccccc----CCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCcccccccccc
Confidence 999999999876321 122223334556 9999999997663 578999999999999999999999877655543
Q ss_pred hhHHHHhcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCCcCCCCCH
Q 005045 616 IHMFVSMALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTSPRERIAM 695 (717)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~ 695 (717)
...|...... ........ -......++.+++..+|+.|.+.
T Consensus 240 ~~~~~~~~~~--~~~~~~~~-------------------------------------~~~~~~~~l~k~l~~~~~~r~s~ 280 (601)
T KOG0590|consen 240 YSSWKSNKGR--FTQLPWNS-------------------------------------ISDQAHDLLHKILKENPSNRLSI 280 (601)
T ss_pred ceeecccccc--cccCcccc-------------------------------------CChhhhhcccccccCCchhcccc
Confidence 3333322100 00000000 02234567888888899999988
Q ss_pred HHHH
Q 005045 696 NVVV 699 (717)
Q Consensus 696 ~eil 699 (717)
+++-
T Consensus 281 ~~~~ 284 (601)
T KOG0590|consen 281 EELK 284 (601)
T ss_pred cccc
Confidence 7764
No 457
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.51 E-value=2e-14 Score=137.44 Aligned_cols=135 Identities=24% Similarity=0.266 Sum_probs=97.1
Q ss_pred ccccCcccccceEEEEeCCCchhhhHHhHhhhhh--HHH----------------------HHHHHHHHHhcCCCCc--e
Q 005045 394 ENLIGTGSFGSVYKGTLGDGTIVAIKVLKLQQQG--ALK----------------------SFIDECNALKSTRHRN--I 447 (717)
Q Consensus 394 ~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~~--~~~----------------------~~~~e~~~l~~l~h~n--i 447 (717)
.+.||+|++|.||.|...+++.||+|++...... ... ....|.+.+.++.+.. +
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 4679999999999999878999999987643211 001 1135666666654332 4
Q ss_pred eEEEEeeccccCCCCceEEEEEecCCCCChhhh-ccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHh-cCCCCeeecC
Q 005045 448 LRVITACSSVDLEGNDFKALVFEFMSNGNLDQW-LHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHH-HCDTPIAHCD 525 (717)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~-l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~-~~~~~ivH~d 525 (717)
.+.++. ...++||||++++++... +... ... ..+..++.+++.++.++|. . +++|||
T Consensus 82 ~~~~~~---------~~~~lv~e~~~g~~~~~~~l~~~--------~~~-~~~~~~~~~~~~~l~~lh~~~---~ivH~D 140 (187)
T cd05119 82 PKPIDL---------NRHVLVMEFIGGDGIPAPRLKDV--------RLL-EDPEELYDQILELMRKLYREA---GLVHGD 140 (187)
T ss_pred CceEec---------CCCEEEEEEeCCCCccChhhhhh--------hhc-ccHHHHHHHHHHHHHHHhhcc---CcCcCC
Confidence 444433 135899999998554321 1111 001 5678899999999999999 6 999999
Q ss_pred CCCCCEEeCCCCceEEeeeccchhc
Q 005045 526 LKPSNVLLDKDMTAHVGDFGLAKFL 550 (717)
Q Consensus 526 lkp~NIll~~~~~~kl~Dfg~~~~~ 550 (717)
|||+||+++ ++.++++|||.+...
T Consensus 141 l~p~Nili~-~~~~~liDfg~a~~~ 164 (187)
T cd05119 141 LSEYNILVD-DGKVYIIDVPQAVEI 164 (187)
T ss_pred CChhhEEEE-CCcEEEEECcccccc
Confidence 999999999 899999999998754
No 458
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.46 E-value=2.3e-13 Score=125.26 Aligned_cols=135 Identities=22% Similarity=0.269 Sum_probs=109.1
Q ss_pred cccccCcccccceEEEEeCCCchhhhHHhHhhhhhHHHHHHHHHHHHhcCCC--CceeEEEEeeccccCCCCceEEEEEe
Q 005045 393 KENLIGTGSFGSVYKGTLGDGTIVAIKVLKLQQQGALKSFIDECNALKSTRH--RNILRVITACSSVDLEGNDFKALVFE 470 (717)
Q Consensus 393 ~~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h--~ni~~~~~~~~~~~~~~~~~~~lv~e 470 (717)
+.+.+++|.++.||.+.... +.+++|....... ...+..|+.+++.+.+ ..+++++... ...+..+++||
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~-----~~~~~~~~v~e 73 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASG-----ESDGWSYLLME 73 (155)
T ss_pred cceecccccccceEEEEecC-CeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEc-----CCCCccEEEEE
Confidence 45789999999999999754 6788998765432 4578889999999966 5888887773 33457899999
Q ss_pred cCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeeccchh
Q 005045 471 FMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKF 549 (717)
Q Consensus 471 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~ 549 (717)
|++++.+..+ +......++.+++++++++|....++++|||++|+||+++..+.++++|||.+..
T Consensus 74 ~~~g~~~~~~--------------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 74 WIEGETLDEV--------------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred ecCCeecccC--------------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence 9987766433 3455677899999999999996444799999999999999989999999998764
No 459
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.45 E-value=2.3e-13 Score=134.19 Aligned_cols=138 Identities=17% Similarity=0.159 Sum_probs=100.9
Q ss_pred cccC-cccccceEEEEeCCCchhhhHHhHh----------h---hhhHHHHHHHHHHHHhcCCCCce--eEEEEeecccc
Q 005045 395 NLIG-TGSFGSVYKGTLGDGTIVAIKVLKL----------Q---QQGALKSFIDECNALKSTRHRNI--LRVITACSSVD 458 (717)
Q Consensus 395 ~~ig-~g~~g~v~~~~~~~~~~vavK~~~~----------~---~~~~~~~~~~e~~~l~~l~h~ni--~~~~~~~~~~~ 458 (717)
..+| .||.|+||.+... ++.+++|.+.. . ......++.+|++++.++.|++| +..++......
T Consensus 37 ~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~ 115 (239)
T PRK01723 37 RVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVRH 115 (239)
T ss_pred ceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeeec
Confidence 4576 8889999998874 55667665531 1 11234678899999999988775 55665532211
Q ss_pred CCCCceEEEEEecCCC-CChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCC
Q 005045 459 LEGNDFKALVFEFMSN-GNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDM 537 (717)
Q Consensus 459 ~~~~~~~~lv~e~~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~ 537 (717)
......++|||+++| .+|.+++... .++.. .+.+|+.++++||+. ||+||||||.||+++.++
T Consensus 116 -~~~~~~~lV~e~l~G~~~L~~~l~~~--------~l~~~----~~~~i~~~l~~lH~~---GI~HrDlkp~NILv~~~~ 179 (239)
T PRK01723 116 -GLFYRADILIERIEGARDLVALLQEA--------PLSEE----QWQAIGQLIARFHDA---GVYHADLNAHNILLDPDG 179 (239)
T ss_pred -CcceeeeEEEEecCCCCCHHHHHhcC--------CCCHH----HHHHHHHHHHHHHHC---CCCCCCCCchhEEEcCCC
Confidence 111234699999997 6898887542 23433 367899999999998 999999999999999989
Q ss_pred ceEEeeeccchh
Q 005045 538 TAHVGDFGLAKF 549 (717)
Q Consensus 538 ~~kl~Dfg~~~~ 549 (717)
.++|+|||.+..
T Consensus 180 ~v~LIDfg~~~~ 191 (239)
T PRK01723 180 KFWLIDFDRGEL 191 (239)
T ss_pred CEEEEECCCccc
Confidence 999999998775
No 460
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.37 E-value=2.5e-12 Score=136.35 Aligned_cols=167 Identities=22% Similarity=0.250 Sum_probs=121.1
Q ss_pred CCchhhhHHhHhhhhhHHHHHHHHHHHHhcCCCCceeEEEEeeccccCCCCceEEEEEecCCCCChhhhccCCCCCcccc
Q 005045 412 DGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQF 491 (717)
Q Consensus 412 ~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~ 491 (717)
++.+|.|..++....+......+.++.++.++||+|+++++. .+..+..|+|+|-+ ..|..++..
T Consensus 36 ~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t-----~e~~~~~ylvTErV--~Pl~~~lk~-------- 100 (690)
T KOG1243|consen 36 DGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDT-----TEEEGTLYLVTERV--RPLETVLKE-------- 100 (690)
T ss_pred cCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhh-----hcccCceEEEeecc--ccHHHHHHH--------
Confidence 555555555544333334556677888999999999999998 55666999999998 478777753
Q ss_pred cccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeeccchhcccccCCCCCCcceeecccccc
Q 005045 492 KKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSI 571 (717)
Q Consensus 492 ~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~ 571 (717)
.+...+...+.||+.||.+||..+ +++|++|+.+.|+|+..|+.||++|..+........ ......--.
T Consensus 101 --l~~~~v~~Gl~qIl~AL~FL~~d~--~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~-------~~~~~~~~~ 169 (690)
T KOG1243|consen 101 --LGKEEVCLGLFQILAALSFLNDDC--NLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNA-------PAKSLYLIE 169 (690)
T ss_pred --hHHHHHHHHHHHHHHHHHHHhccC--CeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCc-------ccccchhhh
Confidence 335566778899999999999763 999999999999999999999999998875421110 111122333
Q ss_pred cccCCCccCCCCCcccchhhHHHHHHHHHhCCCC
Q 005045 572 GYIPPEHMNGQVSILGDIYSYGILLLEMFTGKRP 605 (717)
Q Consensus 572 ~y~aPE~~~~~~~~~sDvwslG~vl~elltg~~p 605 (717)
.|..|+.+... +-..|.|.|||++||++.|..+
T Consensus 170 s~~~P~~~~~s-~~s~D~~~Lg~li~el~ng~~~ 202 (690)
T KOG1243|consen 170 SFDDPEEIDPS-EWSIDSWGLGCLIEELFNGSLL 202 (690)
T ss_pred cccChhhcCcc-ccchhhhhHHHHHHHHhCcccC
Confidence 45666654221 1346999999999999999433
No 461
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.35 E-value=1.1e-13 Score=131.38 Aligned_cols=133 Identities=29% Similarity=0.349 Sum_probs=113.9
Q ss_pred ccCCCCCEEEeecCcccCcCchhhhhccccccEEecCCCccCCCCCccccCCCCCCEEEccCCcCccccchhhhcCCCCC
Q 005045 230 ANCTSLEVLGLARNSFGGEMPISIANLSTHLRRLTMGENLMHGNIPVGIGNLVNLNLLGLEGNNLSGSVPEVIGRLNKLE 309 (717)
Q Consensus 230 ~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 309 (717)
..+..|++||||+|.|+ .+.++..-. +.++.|++|+|.|..+ ..+..+++|+.||||+|.++ .+.++-.++-+.+
T Consensus 281 dTWq~LtelDLS~N~I~-~iDESvKL~-Pkir~L~lS~N~i~~v--~nLa~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNIK 355 (490)
T KOG1259|consen 281 DTWQELTELDLSGNLIT-QIDESVKLA-PKLRRLILSQNRIRTV--QNLAELPQLQLLDLSGNLLA-ECVGWHLKLGNIK 355 (490)
T ss_pred chHhhhhhccccccchh-hhhhhhhhc-cceeEEeccccceeee--hhhhhcccceEeecccchhH-hhhhhHhhhcCEe
Confidence 34578999999999999 888887776 5999999999999843 34899999999999999999 6777888899999
Q ss_pred eEEcccCcCCCCCCcccccccccceeeccccccccc-CCcCccCcCCCceEEeecccCCCC
Q 005045 310 GLGLNVNKFSGLIPSSLGNLTILTRLWMEENRLEGS-IPPSLGNCQKLLVLNLSSNDLNGT 369 (717)
Q Consensus 310 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~l~~N~l~~~ 369 (717)
+|.|++|.+... ..++.+-+|..||+++|+|... -...++++|-|..+.|.+||+.+.
T Consensus 356 tL~La~N~iE~L--SGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~~ 414 (490)
T KOG1259|consen 356 TLKLAQNKIETL--SGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAGS 414 (490)
T ss_pred eeehhhhhHhhh--hhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCcccc
Confidence 999999999755 4577888999999999999732 235789999999999999999853
No 462
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.35 E-value=1.5e-13 Score=137.44 Aligned_cols=214 Identities=23% Similarity=0.230 Sum_probs=131.5
Q ss_pred CCCCCCCEEEccCccccccCC--ccccCCCCCCEEeccCCcCcccCC--hhhhccCCCCeEeccCCCCCCCCCc-cccCC
Q 005045 55 SSLTKLEIIGLGGSNLTGNVP--AWIGNFSSLKALSLAWNNLRGSIP--NELGQLSGLGFFTLYGNFISGIIPS-SIYNI 129 (717)
Q Consensus 55 ~~l~~L~~L~L~~n~l~~~~p--~~~~~l~~L~~L~L~~n~l~~~~~--~~~~~l~~L~~L~L~~N~i~~~~~~-~~~~l 129 (717)
+++.+|+...|.++.+. ..+ .....+++++.||||+|-+..-.+ .....|++|+.|+|+.|++...... .-..+
T Consensus 118 sn~kkL~~IsLdn~~V~-~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l 196 (505)
T KOG3207|consen 118 SNLKKLREISLDNYRVE-DAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLL 196 (505)
T ss_pred hhHHhhhheeecCcccc-ccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhh
Confidence 56777888888888777 444 356778888888888887763322 2345688888888888887622222 22356
Q ss_pred CCccEEEcccCcccccCCcccccCCCCcceeecccccccccCCccCCCCCCCCEEeccCccccccCC--CCccCCCCCCe
Q 005045 130 SSIYYFSVTQNQLHGQLPTDVGLTLPNLKIFAGAVNYFTGSIPVSLSNASNLQVLDFAENGLTGTIP--GNFGSLKDLVR 207 (717)
Q Consensus 130 ~~L~~L~L~~N~l~~~l~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~--~~~~~l~~L~~ 207 (717)
++|+.|.|+.|.++-.--..+....|+|+.|+|+.|...........-+..|++|||++|++- ..+ ...+.++.|..
T Consensus 197 ~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li-~~~~~~~~~~l~~L~~ 275 (505)
T KOG3207|consen 197 SHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLI-DFDQGYKVGTLPGLNQ 275 (505)
T ss_pred hhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCccc-ccccccccccccchhh
Confidence 678888888888862222233346778888888887544344445556677888888887776 333 34566777777
Q ss_pred eeccccccCCcccCchhhhhhhccCCCCCEEEeecCcccCcCchhhhhccccccEEecCCCccCCC-CCccccCCCCCCE
Q 005045 208 LNFDQNELGSREIGDLNFLKFLANCTSLEVLGLARNSFGGEMPISIANLSTHLRRLTMGENLMHGN-IPVGIGNLVNLNL 286 (717)
Q Consensus 208 L~l~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~L~~L~l~~N~l~~~-~~~~~~~l~~L~~ 286 (717)
|+++.+.+.++...+.....-...+++ |++|+++.|+|... ....+..+++|+.
T Consensus 276 Lnls~tgi~si~~~d~~s~~kt~~f~k-------------------------L~~L~i~~N~I~~w~sl~~l~~l~nlk~ 330 (505)
T KOG3207|consen 276 LNLSSTGIASIAEPDVESLDKTHTFPK-------------------------LEYLNISENNIRDWRSLNHLRTLENLKH 330 (505)
T ss_pred hhccccCcchhcCCCccchhhhccccc-------------------------ceeeecccCccccccccchhhccchhhh
Confidence 777777777655322111111233444 44555555544311 1122344567777
Q ss_pred EEccCCcCc
Q 005045 287 LGLEGNNLS 295 (717)
Q Consensus 287 L~L~~N~l~ 295 (717)
|.+..|.+.
T Consensus 331 l~~~~n~ln 339 (505)
T KOG3207|consen 331 LRITLNYLN 339 (505)
T ss_pred hhccccccc
Confidence 777777776
No 463
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.35 E-value=9.9e-13 Score=126.91 Aligned_cols=161 Identities=23% Similarity=0.328 Sum_probs=120.0
Q ss_pred HHhcCCCCceeEEEEeeccccCCCCceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcC
Q 005045 438 ALKSTRHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHC 517 (717)
Q Consensus 438 ~l~~l~h~ni~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~ 517 (717)
.+-++.|.|++++..++.+...++.....++.||+..|++.+++++... ....+....-.+|+.||+.||.|||+ |
T Consensus 120 nllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~---~~~a~~~~~wkkw~tqIlsal~yLhs-~ 195 (458)
T KOG1266|consen 120 NLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKK---NQKALFQKAWKKWCTQILSALSYLHS-C 195 (458)
T ss_pred HHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHH---hhhhhhHHHHHHHHHHHHhhhhhhhc-c
Confidence 3445679999999999888877777788999999999999999986532 22567777888999999999999999 5
Q ss_pred CCCeeecCCCCCCEEeCCCCceEEeeeccchhcccccCCCCCCcceeecccccccccCCCc-cCCCCCcccchhhHHHHH
Q 005045 518 DTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEH-MNGQVSILGDIYSYGILL 596 (717)
Q Consensus 518 ~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~sDvwslG~vl 596 (717)
...++|+++.-+.|++..+|-+|++--.-.... .. ...... .......+.++|.+||. -..+.+.++|||+||+..
T Consensus 196 ~PpiihgnlTc~tifiq~ngLIkig~~ap~s~h-~s-~~~~~~-~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcA 272 (458)
T KOG1266|consen 196 DPPIIHGNLTCDTIFIQHNGLIKIGSVAPDSTH-PS-VNSTRE-AEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCA 272 (458)
T ss_pred CCccccCCcchhheeecCCceEEecccCccccc-hh-hhhhhH-hhhhccccCCccccCCcCcccccccchhhhhhhHHH
Confidence 678999999999999999998887532111110 00 000000 01112236788999998 444678899999999999
Q ss_pred HHHHhCCCC
Q 005045 597 LEMFTGKRP 605 (717)
Q Consensus 597 ~elltg~~p 605 (717)
.+|-.|..-
T Consensus 273 lemailEiq 281 (458)
T KOG1266|consen 273 LEMAILEIQ 281 (458)
T ss_pred HHHHHheec
Confidence 999887754
No 464
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.34 E-value=1.1e-12 Score=120.67 Aligned_cols=120 Identities=26% Similarity=0.361 Sum_probs=38.3
Q ss_pred cCCCcCcCCCCcCCcCCCCCCEEECCCCcccccCCcCCC-CCCCCCEEEccCccccccCCccccCCCCCCEEeccCCcCc
Q 005045 17 LTYNYLSGKIPTNLSHCTELRSFEASVNDFVGQIPNQLS-SLTKLEIIGLGGSNLTGNVPAWIGNFSSLKALSLAWNNLR 95 (717)
Q Consensus 17 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~-~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~ 95 (717)
|..+.|. ..+. +.+...+++|+|++|.|+ .+. .++ .+.+|+.|+|++|.|+ .++ .+..+++|++|+|++|+|+
T Consensus 4 lt~~~i~-~~~~-~~n~~~~~~L~L~~n~I~-~Ie-~L~~~l~~L~~L~Ls~N~I~-~l~-~l~~L~~L~~L~L~~N~I~ 77 (175)
T PF14580_consen 4 LTANMIE-QIAQ-YNNPVKLRELNLRGNQIS-TIE-NLGATLDKLEVLDLSNNQIT-KLE-GLPGLPRLKTLDLSNNRIS 77 (175)
T ss_dssp ------------------------------------S--TT-TT--EEE-TTS--S---T-T----TT--EEE--SS---
T ss_pred ccccccc-cccc-cccccccccccccccccc-ccc-chhhhhcCCCEEECCCCCCc-ccc-CccChhhhhhcccCCCCCC
Confidence 3444454 3333 455567888888888888 443 354 5778888888888888 444 4777888888888888888
Q ss_pred ccCChhh-hccCCCCeEeccCCCCCCCC-CccccCCCCccEEEcccCccc
Q 005045 96 GSIPNEL-GQLSGLGFFTLYGNFISGII-PSSIYNISSIYYFSVTQNQLH 143 (717)
Q Consensus 96 ~~~~~~~-~~l~~L~~L~L~~N~i~~~~-~~~~~~l~~L~~L~L~~N~l~ 143 (717)
.+.+.+ ..+++|+.|+|++|+|.... -..+..+++|+.|+|.+|.++
T Consensus 78 -~i~~~l~~~lp~L~~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~ 126 (175)
T PF14580_consen 78 -SISEGLDKNLPNLQELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVC 126 (175)
T ss_dssp -S-CHHHHHH-TT--EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GGG
T ss_pred -ccccchHHhCCcCCEEECcCCcCCChHHhHHHHcCCCcceeeccCCccc
Confidence 444444 46788888888888887432 245667788888888888876
No 465
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=99.32 E-value=2e-13 Score=146.96 Aligned_cols=247 Identities=29% Similarity=0.382 Sum_probs=136.3
Q ss_pred CCCCCCEEeccCCcCcccCChhhhccCCCCeEeccCCCCCCCCCccccCCCCccEEEcccCcccccCCcccccCCCCcce
Q 005045 80 NFSSLKALSLAWNNLRGSIPNELGQLSGLGFFTLYGNFISGIIPSSIYNISSIYYFSVTQNQLHGQLPTDVGLTLPNLKI 159 (717)
Q Consensus 80 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~l~~~~~~~l~~L~~ 159 (717)
.+..++.+++..|.|. .+-..+..+++|+.|++.+|+|..+ ...+..+++|++|+|++|.|+ .+.
T Consensus 70 ~l~~l~~l~l~~n~i~-~~~~~l~~~~~l~~l~l~~n~i~~i-~~~l~~~~~L~~L~ls~N~I~-~i~------------ 134 (414)
T KOG0531|consen 70 SLTSLKELNLRQNLIA-KILNHLSKLKSLEALDLYDNKIEKI-ENLLSSLVNLQVLDLSFNKIT-KLE------------ 134 (414)
T ss_pred HhHhHHhhccchhhhh-hhhcccccccceeeeeccccchhhc-ccchhhhhcchheeccccccc-ccc------------
Confidence 3445555556666655 2333355555666666666666522 222555555666666666655 222
Q ss_pred eecccccccccCCccCCCCCCCCEEeccCccccccCCCCccCCCCCCeeeccccccCCcccCchhhh-hhhccCCCCCEE
Q 005045 160 FAGAVNYFTGSIPVSLSNASNLQVLDFAENGLTGTIPGNFGSLKDLVRLNFDQNELGSREIGDLNFL-KFLANCTSLEVL 238 (717)
Q Consensus 160 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~-~~~~~l~~L~~L 238 (717)
.+..++.|+.|++++|.|+ .+. .+..++.|+.+++++|++..+. . . ...+.+++.+
T Consensus 135 --------------~l~~l~~L~~L~l~~N~i~-~~~-~~~~l~~L~~l~l~~n~i~~ie------~~~-~~~~~~l~~l 191 (414)
T KOG0531|consen 135 --------------GLSTLTLLKELNLSGNLIS-DIS-GLESLKSLKLLDLSYNRIVDIE------NDE-LSELISLEEL 191 (414)
T ss_pred --------------chhhccchhhheeccCcch-hcc-CCccchhhhcccCCcchhhhhh------hhh-hhhccchHHH
Confidence 1233333555555555554 222 2333555555555555555443 1 1 2445555666
Q ss_pred EeecCcccCcCchhhhhccccccEEecCCCccCCCCCccccCCC--CCCEEEccCCcCccccchhhhcCCCCCeEEcccC
Q 005045 239 GLARNSFGGEMPISIANLSTHLRRLTMGENLMHGNIPVGIGNLV--NLNLLGLEGNNLSGSVPEVIGRLNKLEGLGLNVN 316 (717)
Q Consensus 239 ~L~~N~l~~~~p~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~--~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N 316 (717)
++++|.+........ . ..+..+++..|.++...+ +..+. .|+.+++++|++. ..+..+..+.++..|++++|
T Consensus 192 ~l~~n~i~~i~~~~~--~-~~l~~~~l~~n~i~~~~~--l~~~~~~~L~~l~l~~n~i~-~~~~~~~~~~~l~~l~~~~n 265 (414)
T KOG0531|consen 192 DLGGNSIREIEGLDL--L-KKLVLLSLLDNKISKLEG--LNELVMLHLRELYLSGNRIS-RSPEGLENLKNLPVLDLSSN 265 (414)
T ss_pred hccCCchhcccchHH--H-HHHHHhhcccccceeccC--cccchhHHHHHHhcccCccc-cccccccccccccccchhhc
Confidence 666666552211111 1 234444666666653222 22222 3788888888887 44456777888888888888
Q ss_pred cCCCCCCcccccccccceeeccccccccc---CCcC-ccCcCCCceEEeecccCCCCCCc
Q 005045 317 KFSGLIPSSLGNLTILTRLWMEENRLEGS---IPPS-LGNCQKLLVLNLSSNDLNGTIPK 372 (717)
Q Consensus 317 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~---~p~~-~~~l~~L~~L~l~~N~l~~~~p~ 372 (717)
++... ..+...+.+..+.+..|.+... .... ....+.+..+.+.+|++....+.
T Consensus 266 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (414)
T KOG0531|consen 266 RISNL--EGLERLPKLSELWLNDNKLALSEAISQEYITSAAPTLVTLTLELNPIRKISSL 323 (414)
T ss_pred ccccc--ccccccchHHHhccCcchhcchhhhhccccccccccccccccccCcccccccc
Confidence 88755 3355667788888888887621 2222 45677888888888888754443
No 466
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.32 E-value=5.2e-14 Score=137.09 Aligned_cols=177 Identities=22% Similarity=0.281 Sum_probs=94.5
Q ss_pred hccCCCCeEeccCCCCCCCCCcc----ccCCCCccEEEcccCcccccCCcc-cccCCCCcceeecccccccccCCccCCC
Q 005045 103 GQLSGLGFFTLYGNFISGIIPSS----IYNISSIYYFSVTQNQLHGQLPTD-VGLTLPNLKIFAGAVNYFTGSIPVSLSN 177 (717)
Q Consensus 103 ~~l~~L~~L~L~~N~i~~~~~~~----~~~l~~L~~L~L~~N~l~~~l~~~-~~~~l~~L~~L~l~~n~l~~~~~~~~~~ 177 (717)
.+.++|++||||+|.+.-..+.. +..+++|++|.|.+|.+. ..... +. ..|..|. .| ...+.
T Consensus 89 ~~~~~L~~ldLSDNA~G~~g~~~l~~ll~s~~~L~eL~L~N~Glg-~~ag~~l~---~al~~l~--~~-------kk~~~ 155 (382)
T KOG1909|consen 89 LGCPKLQKLDLSDNAFGPKGIRGLEELLSSCTDLEELYLNNCGLG-PEAGGRLG---RALFELA--VN-------KKAAS 155 (382)
T ss_pred hcCCceeEeeccccccCccchHHHHHHHHhccCHHHHhhhcCCCC-hhHHHHHH---HHHHHHH--HH-------hccCC
Confidence 34456666666666665332222 345667777777777765 22111 11 1111111 11 12334
Q ss_pred CCCCCEEeccCccccccC----CCCccCCCCCCeeeccccccCCcccCchhhhhhhccCCCCCEEEeecCcccCcCchhh
Q 005045 178 ASNLQVLDFAENGLTGTI----PGNFGSLKDLVRLNFDQNELGSREIGDLNFLKFLANCTSLEVLGLARNSFGGEMPISI 253 (717)
Q Consensus 178 l~~L~~L~l~~N~l~~~~----~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~ 253 (717)
-+.|+.+...+|++.... ...|...+.|+.+.++.|.|..-++. .....|..++.|+.|||..|-++......+
T Consensus 156 ~~~Lrv~i~~rNrlen~ga~~~A~~~~~~~~leevr~~qN~I~~eG~~--al~eal~~~~~LevLdl~DNtft~egs~~L 233 (382)
T KOG1909|consen 156 KPKLRVFICGRNRLENGGATALAEAFQSHPTLEEVRLSQNGIRPEGVT--ALAEALEHCPHLEVLDLRDNTFTLEGSVAL 233 (382)
T ss_pred CcceEEEEeeccccccccHHHHHHHHHhccccceEEEecccccCchhH--HHHHHHHhCCcceeeecccchhhhHHHHHH
Confidence 467888888888776322 23456667788888888877765542 224567778888888888888874433332
Q ss_pred ----hhccccccEEecCCCccCCCCCcccc-----CCCCCCEEEccCCcCc
Q 005045 254 ----ANLSTHLRRLTMGENLMHGNIPVGIG-----NLVNLNLLGLEGNNLS 295 (717)
Q Consensus 254 ----~~~~~~L~~L~l~~N~l~~~~~~~~~-----~l~~L~~L~L~~N~l~ 295 (717)
..+ ++|+.|++++|.+......+|. ..++|+.|.|.+|.|+
T Consensus 234 akaL~s~-~~L~El~l~dcll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt 283 (382)
T KOG1909|consen 234 AKALSSW-PHLRELNLGDCLLENEGAIAFVDALKESAPSLEVLELAGNEIT 283 (382)
T ss_pred HHHhccc-chheeecccccccccccHHHHHHHHhccCCCCceeccCcchhH
Confidence 223 2455555555555433222221 2345555555555554
No 467
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.29 E-value=7.7e-13 Score=125.80 Aligned_cols=127 Identities=24% Similarity=0.306 Sum_probs=74.4
Q ss_pred CCCeeeccccccCCcccCchhhhhhhccCCCCCEEEeecCcccCcCchhhhhccccccEEecCCCccCCCCCccccCCCC
Q 005045 204 DLVRLNFDQNELGSREIGDLNFLKFLANCTSLEVLGLARNSFGGEMPISIANLSTHLRRLTMGENLMHGNIPVGIGNLVN 283 (717)
Q Consensus 204 ~L~~L~l~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~ 283 (717)
.|++++||+|.|+.++ ....-.|+++.|++|+|.|+ .+.. +..+ .+|+.||||+|.++ ....+-..+-|
T Consensus 285 ~LtelDLS~N~I~~iD-------ESvKL~Pkir~L~lS~N~i~-~v~n-La~L-~~L~~LDLS~N~Ls-~~~Gwh~KLGN 353 (490)
T KOG1259|consen 285 ELTELDLSGNLITQID-------ESVKLAPKLRRLILSQNRIR-TVQN-LAEL-PQLQLLDLSGNLLA-ECVGWHLKLGN 353 (490)
T ss_pred hhhhccccccchhhhh-------hhhhhccceeEEecccccee-eehh-hhhc-ccceEeecccchhH-hhhhhHhhhcC
Confidence 4444455555444443 23334455555555555554 2221 3333 25555566655555 23334445666
Q ss_pred CCEEEccCCcCccccchhhhcCCCCCeEEcccCcCCCCC-Ccccccccccceeeccccccc
Q 005045 284 LNLLGLEGNNLSGSVPEVIGRLNKLEGLGLNVNKFSGLI-PSSLGNLTILTRLWMEENRLE 343 (717)
Q Consensus 284 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~-~~~~~~l~~L~~L~L~~N~l~ 343 (717)
.+.|.|++|.|. .+ +.+.++-+|..||+++|+|.... -..++++|-|+.|.|.+|.+.
T Consensus 354 IKtL~La~N~iE-~L-SGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~ 412 (490)
T KOG1259|consen 354 IKTLKLAQNKIE-TL-SGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLA 412 (490)
T ss_pred EeeeehhhhhHh-hh-hhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCcc
Confidence 777777777776 22 23566667777888888776542 246788888888888888887
No 468
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=99.29 E-value=2.4e-13 Score=146.29 Aligned_cols=249 Identities=25% Similarity=0.292 Sum_probs=163.8
Q ss_pred CCCCCCCEEEccCccccccCCccccCCCCCCEEeccCCcCcccCChhhhccCCCCeEeccCCCCCCCCCccccCCCCccE
Q 005045 55 SSLTKLEIIGLGGSNLTGNVPAWIGNFSSLKALSLAWNNLRGSIPNELGQLSGLGFFTLYGNFISGIIPSSIYNISSIYY 134 (717)
Q Consensus 55 ~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~ 134 (717)
..+..++.+++..|.|. .+-..+..+.+|+.|++.+|+|+ .+...+..+++|++|+|++|.|+.+ ..+..++.|+.
T Consensus 69 ~~l~~l~~l~l~~n~i~-~~~~~l~~~~~l~~l~l~~n~i~-~i~~~l~~~~~L~~L~ls~N~I~~i--~~l~~l~~L~~ 144 (414)
T KOG0531|consen 69 ESLTSLKELNLRQNLIA-KILNHLSKLKSLEALDLYDNKIE-KIENLLSSLVNLQVLDLSFNKITKL--EGLSTLTLLKE 144 (414)
T ss_pred HHhHhHHhhccchhhhh-hhhcccccccceeeeeccccchh-hcccchhhhhcchheeccccccccc--cchhhccchhh
Confidence 45677778888888888 44455778888999999999998 4444478888999999999999854 34666777888
Q ss_pred EEcccCcccccCCcccccCCCCcceeecccccccccCCccCCCCCCCCEEeccCccccccCC-CCccCCCCCCeeecccc
Q 005045 135 FSVTQNQLHGQLPTDVGLTLPNLKIFAGAVNYFTGSIPVSLSNASNLQVLDFAENGLTGTIP-GNFGSLKDLVRLNFDQN 213 (717)
Q Consensus 135 L~L~~N~l~~~l~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~l~~L~~L~l~~N 213 (717)
|++++|.|+ .+.. +..++.|+.+++++|.++...+ . ...+.+++.+++.+|
T Consensus 145 L~l~~N~i~-~~~~--------------------------~~~l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n 196 (414)
T KOG0531|consen 145 LNLSGNLIS-DISG--------------------------LESLKSLKLLDLSYNRIVDIENDE-LSELISLEELDLGGN 196 (414)
T ss_pred heeccCcch-hccC--------------------------CccchhhhcccCCcchhhhhhhhh-hhhccchHHHhccCC
Confidence 888888887 3332 2234555555556655553322 1 355566666666666
Q ss_pred ccCCcccCchhhhhhhccCCCCCEEEeecCcccCcCchhhhhccccccEEecCCCccCCCCCccccCCCCCCEEEccCCc
Q 005045 214 ELGSREIGDLNFLKFLANCTSLEVLGLARNSFGGEMPISIANLSTHLRRLTMGENLMHGNIPVGIGNLVNLNLLGLEGNN 293 (717)
Q Consensus 214 ~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 293 (717)
.+..+. .+..+..+..+++..|.++..-+...... ..|+.+++++|.+. ..+..+..+.++..|++.+|+
T Consensus 197 ~i~~i~--------~~~~~~~l~~~~l~~n~i~~~~~l~~~~~-~~L~~l~l~~n~i~-~~~~~~~~~~~l~~l~~~~n~ 266 (414)
T KOG0531|consen 197 SIREIE--------GLDLLKKLVLLSLLDNKISKLEGLNELVM-LHLRELYLSGNRIS-RSPEGLENLKNLPVLDLSSNR 266 (414)
T ss_pred chhccc--------chHHHHHHHHhhcccccceeccCcccchh-HHHHHHhcccCccc-cccccccccccccccchhhcc
Confidence 665543 23334444555667777662222111111 03778888888877 333667778888999999998
Q ss_pred CccccchhhhcCCCCCeEEcccCcCCCC---CCcc-cccccccceeecccccccccCC
Q 005045 294 LSGSVPEVIGRLNKLEGLGLNVNKFSGL---IPSS-LGNLTILTRLWMEENRLEGSIP 347 (717)
Q Consensus 294 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~---~~~~-~~~l~~L~~L~L~~N~l~~~~p 347 (717)
+.... .+.....+..+.++.|++... .... ....+.++.+.+.+|.+....+
T Consensus 267 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (414)
T KOG0531|consen 267 ISNLE--GLERLPKLSELWLNDNKLALSEAISQEYITSAAPTLVTLTLELNPIRKISS 322 (414)
T ss_pred ccccc--cccccchHHHhccCcchhcchhhhhccccccccccccccccccCccccccc
Confidence 87322 255667777788888887632 1221 4566888899999998875444
No 469
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.27 E-value=5.3e-12 Score=135.56 Aligned_cols=141 Identities=23% Similarity=0.253 Sum_probs=98.7
Q ss_pred ccccCcccccceEEEEeCCCchhhhHHhHhhhhhH----------------------------------H------HHHH
Q 005045 394 ENLIGTGSFGSVYKGTLGDGTIVAIKVLKLQQQGA----------------------------------L------KSFI 433 (717)
Q Consensus 394 ~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~~~----------------------------------~------~~~~ 433 (717)
.+.+|.|+.|.||+|+.++|+.||||+..+.-.+. . -.+.
T Consensus 122 ~~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~ 201 (437)
T TIGR01982 122 EKPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLR 201 (437)
T ss_pred CcceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHH
Confidence 46799999999999999999999999874321000 0 1244
Q ss_pred HHHHHHhcC----CCCceeEEEEeeccccCCCCceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHH-
Q 005045 434 DECNALKST----RHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVAS- 508 (717)
Q Consensus 434 ~e~~~l~~l----~h~ni~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~- 508 (717)
.|++.+.++ .|.+-+.+...+.+ ..+..++||||++|+++.++..... ... ...+++.+++.
T Consensus 202 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~----~~~~~vLvmE~i~G~~L~~~~~~~~------~~~---~~~~ia~~~~~~ 268 (437)
T TIGR01982 202 REAANASELGENFKNDPGVYVPEVYWD----RTSERVLTMEWIDGIPLSDIAALDE------AGL---DRKALAENLARS 268 (437)
T ss_pred HHHHHHHHHHHhcCCCCCEEeCCEehh----hcCCceEEEEeECCcccccHHHHHh------cCC---CHHHHHHHHHHH
Confidence 566655555 23333444444322 1234689999999999988764221 111 23456666666
Q ss_pred HHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeeccchhc
Q 005045 509 ALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFL 550 (717)
Q Consensus 509 ~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~ 550 (717)
.+..+|.. |++|+|++|.||+++.+|.++++|||++..+
T Consensus 269 ~l~ql~~~---g~~H~D~hPgNilv~~~g~i~liDfG~~~~l 307 (437)
T TIGR01982 269 FLNQVLRD---GFFHADLHPGNIFVLKDGKIIALDFGIVGRL 307 (437)
T ss_pred HHHHHHhC---CceeCCCCcccEEECCCCcEEEEeCCCeeEC
Confidence 46788887 9999999999999999999999999998765
No 470
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.26 E-value=8.6e-12 Score=114.70 Aligned_cols=127 Identities=26% Similarity=0.356 Sum_probs=44.8
Q ss_pred CCCCCCCCEEeccCccccccCCCCcc-CCCCCCeeeccccccCCcccCchhhhhhhccCCCCCEEEeecCcccCcCchhh
Q 005045 175 LSNASNLQVLDFAENGLTGTIPGNFG-SLKDLVRLNFDQNELGSREIGDLNFLKFLANCTSLEVLGLARNSFGGEMPISI 253 (717)
Q Consensus 175 ~~~l~~L~~L~l~~N~l~~~~~~~~~-~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~ 253 (717)
+.+..++++|+|++|.|+ .+. .++ .+.+|+.|++++|.|+.++ .+..+++|++|++++|+|+ .++..+
T Consensus 15 ~~n~~~~~~L~L~~n~I~-~Ie-~L~~~l~~L~~L~Ls~N~I~~l~--------~l~~L~~L~~L~L~~N~I~-~i~~~l 83 (175)
T PF14580_consen 15 YNNPVKLRELNLRGNQIS-TIE-NLGATLDKLEVLDLSNNQITKLE--------GLPGLPRLKTLDLSNNRIS-SISEGL 83 (175)
T ss_dssp -----------------------S--TT-TT--EEE-TTS--S--T--------T----TT--EEE--SS----S-CHHH
T ss_pred cccccccccccccccccc-ccc-chhhhhcCCCEEECCCCCCcccc--------CccChhhhhhcccCCCCCC-ccccch
Confidence 444556777888888777 343 344 5677778888888777754 4666788888888888888 555444
Q ss_pred hhccccccEEecCCCccCCCC-CccccCCCCCCEEEccCCcCccccch----hhhcCCCCCeEEc
Q 005045 254 ANLSTHLRRLTMGENLMHGNI-PVGIGNLVNLNLLGLEGNNLSGSVPE----VIGRLNKLEGLGL 313 (717)
Q Consensus 254 ~~~~~~L~~L~l~~N~l~~~~-~~~~~~l~~L~~L~L~~N~l~~~~~~----~~~~l~~L~~L~L 313 (717)
....++|++|++++|+|.... -..+..+++|+.|+|.+|+++.. +. .+..+|+|+.||-
T Consensus 84 ~~~lp~L~~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~~~-~~YR~~vi~~lP~Lk~LD~ 147 (175)
T PF14580_consen 84 DKNLPNLQELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVCEK-KNYRLFVIYKLPSLKVLDG 147 (175)
T ss_dssp HHH-TT--EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GGGGS-TTHHHHHHHH-TT-SEETT
T ss_pred HHhCCcCCEEECcCCcCCChHHhHHHHcCCCcceeeccCCcccch-hhHHHHHHHHcChhheeCC
Confidence 432247888888888876432 24566778888888888888732 32 3556777777764
No 471
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.26 E-value=4.6e-12 Score=133.47 Aligned_cols=203 Identities=28% Similarity=0.319 Sum_probs=155.8
Q ss_pred ccccccccccCc--ccccceEEEEe--C-CCchhhhHHhHhhh--hhHHHHHHHHHHHHhcC-CCCceeEEEEeeccccC
Q 005045 388 TDNFSKENLIGT--GSFGSVYKGTL--G-DGTIVAIKVLKLQQ--QGALKSFIDECNALKST-RHRNILRVITACSSVDL 459 (717)
Q Consensus 388 ~~~y~~~~~ig~--g~~g~v~~~~~--~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~~~ 459 (717)
...+.+...+|. |.+|.+|.+.. . ++..+|+|.-+... +....+-.+|+...+.+ .|++.++.... .
T Consensus 113 ~~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~-----~ 187 (524)
T KOG0601|consen 113 DQRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPA-----W 187 (524)
T ss_pred hhhcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcc-----c
Confidence 345667788899 99999999885 3 78889988844332 22334445677777777 68999886666 5
Q ss_pred CCCceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHH----HHHHHHhcCCCCeeecCCCCCCEEeCC
Q 005045 460 EGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVAS----ALDYLHHHCDTPIAHCDLKPSNVLLDK 535 (717)
Q Consensus 460 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~----~l~~LH~~~~~~ivH~dlkp~NIll~~ 535 (717)
++.+..++-+|.+ +.++.++..... ..++....+....+... |+.++|.. .++|-|++|.||+...
T Consensus 188 e~~~~lfiqtE~~-~~sl~~~~~~~~------~~~p~~~l~~~~~~~~~~~~~al~~~hs~---~~~~~~~kp~~i~~~~ 257 (524)
T KOG0601|consen 188 EGSGILFIQTELC-GESLQSYCHTPC------NFLPDNLLWNSLRDWLSRDVTALSHLHSN---NIVHDDLKPANIFTTS 257 (524)
T ss_pred ccCCcceeeeccc-cchhHHhhhccc------ccCCchhhhhHHhhhhhcccccccccCCC---cccccccchhheeccc
Confidence 6677899999998 578888876543 34677777778888888 99999998 9999999999999999
Q ss_pred C-CceEEeeeccchhcccccCCCCCCcceeecccccccccCCCccCCCCCcccchhhHHHHHHHHHhCCCCCC
Q 005045 536 D-MTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYIPPEHMNGQVSILGDIYSYGILLLEMFTGKRPTG 607 (717)
Q Consensus 536 ~-~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~sDvwslG~vl~elltg~~p~~ 607 (717)
+ ...+++|||....+....-. ..........+..-|++||..++-++.++|+||+|.++.+..+|..+..
T Consensus 258 ~~~s~~~~df~~v~~i~~~~~~--~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~ 328 (524)
T KOG0601|consen 258 DWTSCKLTDFGLVSKISDGNFS--SVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPS 328 (524)
T ss_pred ccceeecCCcceeEEccCCccc--cceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhccccc
Confidence 9 89999999998776322211 1122223346788899999999999999999999999999999887753
No 472
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.25 E-value=4.1e-13 Score=130.93 Aligned_cols=109 Identities=17% Similarity=0.224 Sum_probs=77.2
Q ss_pred cccEEecCCCccCCC----CCccccCCCCCCEEEccCCcCccc----cchhhhcCCCCCeEEcccCcCCCCCCcccc---
Q 005045 259 HLRRLTMGENLMHGN----IPVGIGNLVNLNLLGLEGNNLSGS----VPEVIGRLNKLEGLGLNVNKFSGLIPSSLG--- 327 (717)
Q Consensus 259 ~L~~L~l~~N~l~~~----~~~~~~~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~--- 327 (717)
.|+.+.++.|.|... ....|..+++|+.|||..|-++.. +...++.|+.|+.|++++|.+......+|.
T Consensus 186 ~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L~El~l~dcll~~~Ga~a~~~al 265 (382)
T KOG1909|consen 186 TLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHLRELNLGDCLLENEGAIAFVDAL 265 (382)
T ss_pred ccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHHhcccchheeecccccccccccHHHHHHHH
Confidence 455555555544321 234577788888888888887642 344667788899999999988876555543
Q ss_pred --cccccceeeccccccccc----CCcCccCcCCCceEEeecccCC
Q 005045 328 --NLTILTRLWMEENRLEGS----IPPSLGNCQKLLVLNLSSNDLN 367 (717)
Q Consensus 328 --~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~ 367 (717)
..++|+.|.|.+|.++.. +...+...+.|..|+|++|.+.
T Consensus 266 ~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l~ 311 (382)
T KOG1909|consen 266 KESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRLG 311 (382)
T ss_pred hccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCccccc
Confidence 357899999999998732 3334556889999999999994
No 473
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.23 E-value=1.5e-12 Score=130.47 Aligned_cols=208 Identities=21% Similarity=0.238 Sum_probs=114.8
Q ss_pred cCCCCccEEEcccCcccccCCc-ccccCCCCcceeecccccccccCC--ccCCCCCCCCEEeccCccccccCCCCc-cCC
Q 005045 127 YNISSIYYFSVTQNQLHGQLPT-DVGLTLPNLKIFAGAVNYFTGSIP--VSLSNASNLQVLDFAENGLTGTIPGNF-GSL 202 (717)
Q Consensus 127 ~~l~~L~~L~L~~N~l~~~l~~-~~~~~l~~L~~L~l~~n~l~~~~~--~~~~~l~~L~~L~l~~N~l~~~~~~~~-~~l 202 (717)
.++.+|+.+.|.+..+. ..+. .....+++++.|+|+.|-+....+ .-...+++|+.|+|+.|++........ ..+
T Consensus 118 sn~kkL~~IsLdn~~V~-~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l 196 (505)
T KOG3207|consen 118 SNLKKLREISLDNYRVE-DAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLL 196 (505)
T ss_pred hhHHhhhheeecCcccc-ccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhh
Confidence 35667777778777775 3332 333456666666666666653322 223456666666666666652222111 134
Q ss_pred CCCCeeeccccccCCcccCchhhhhhhccCCCCCEEEeecCcccCcCchhhhhccccccEEecCCCccCCCCCccccCCC
Q 005045 203 KDLVRLNFDQNELGSREIGDLNFLKFLANCTSLEVLGLARNSFGGEMPISIANLSTHLRRLTMGENLMHGNIPVGIGNLV 282 (717)
Q Consensus 203 ~~L~~L~l~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~ 282 (717)
+.|+.|.|+.|.++..++ ...+..+| +|+.|+|..|....+......-+.
T Consensus 197 ~~lK~L~l~~CGls~k~V-----~~~~~~fP-------------------------sl~~L~L~~N~~~~~~~~~~~i~~ 246 (505)
T KOG3207|consen 197 SHLKQLVLNSCGLSWKDV-----QWILLTFP-------------------------SLEVLYLEANEIILIKATSTKILQ 246 (505)
T ss_pred hhhheEEeccCCCCHHHH-----HHHHHhCC-------------------------cHHHhhhhcccccceecchhhhhh
Confidence 445555555555543221 12233344 444455544432212222333445
Q ss_pred CCCEEEccCCcCccccc--hhhhcCCCCCeEEcccCcCCCCCCccc------ccccccceeecccccccccCC--cCccC
Q 005045 283 NLNLLGLEGNNLSGSVP--EVIGRLNKLEGLGLNVNKFSGLIPSSL------GNLTILTRLWMEENRLEGSIP--PSLGN 352 (717)
Q Consensus 283 ~L~~L~L~~N~l~~~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~------~~l~~L~~L~L~~N~l~~~~p--~~~~~ 352 (717)
.|+.|||++|++. ..+ ...+.++.|+.|+++.|.+.++.-... ..+++|++|+++.|++. ..+ ..+..
T Consensus 247 ~L~~LdLs~N~li-~~~~~~~~~~l~~L~~Lnls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~-~w~sl~~l~~ 324 (505)
T KOG3207|consen 247 TLQELDLSNNNLI-DFDQGYKVGTLPGLNQLNLSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIR-DWRSLNHLRT 324 (505)
T ss_pred HHhhccccCCccc-ccccccccccccchhhhhccccCcchhcCCCccchhhhcccccceeeecccCccc-cccccchhhc
Confidence 5666666666665 233 235566677777777777665432222 34578888888888886 222 34566
Q ss_pred cCCCceEEeecccCC
Q 005045 353 CQKLLVLNLSSNDLN 367 (717)
Q Consensus 353 l~~L~~L~l~~N~l~ 367 (717)
+++|+.|.+..|+|+
T Consensus 325 l~nlk~l~~~~n~ln 339 (505)
T KOG3207|consen 325 LENLKHLRITLNYLN 339 (505)
T ss_pred cchhhhhhccccccc
Confidence 778888888888886
No 474
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=99.20 E-value=6.3e-10 Score=111.53 Aligned_cols=275 Identities=14% Similarity=0.123 Sum_probs=165.5
Q ss_pred cccccCcccccceEEEEeCCCchhhhHHhHhhhhhHHHHHHHHHHHHhcC-CCCceeEEEEe-eccc-cCCCCceEEEEE
Q 005045 393 KENLIGTGSFGSVYKGTLGDGTIVAIKVLKLQQQGALKSFIDECNALKST-RHRNILRVITA-CSSV-DLEGNDFKALVF 469 (717)
Q Consensus 393 ~~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~ni~~~~~~-~~~~-~~~~~~~~~lv~ 469 (717)
..+.+|+|+.+.+|-.- .-+..+.|++........... +..|... .||-+..-+.+ .... .-.......++|
T Consensus 15 ~gr~LgqGgea~ly~l~--e~~d~VAKIYh~Pppa~~aqk---~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~iGflm 89 (637)
T COG4248 15 PGRPLGQGGEADLYTLG--EVRDQVAKIYHAPPPAAQAQK---VAELAATPDAPLLNYRVAWPQATLHGGRRGKVIGFLM 89 (637)
T ss_pred CCccccCCccceeeecc--hhhchhheeecCCCchHHHHH---HHHhccCCCCcchhhhhcccHHHhhCCCccceeEEec
Confidence 45779999999988643 122245577765543332222 2222333 55543331111 0000 012233477899
Q ss_pred ecCCCC-ChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeeccch
Q 005045 470 EFMSNG-NLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAK 548 (717)
Q Consensus 470 e~~~~~-~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~ 548 (717)
+.+++. .+.++..... .........|.-.+..++.++.+.+.||.. |++-||++++|+||++++.|.|.|-..-.
T Consensus 90 P~v~g~~pI~~~y~p~t-RRqs~P~~~w~fllrvaRnlA~aFA~lH~~---Gh~vGDVn~~~~lVsd~~~V~LVdsDsfq 165 (637)
T COG4248 90 PKVSGKEPIHMIYSPAT-RRQSYPHCAWDFLLRVARNLASAFATLHEH---GHVVGDVNQNSFLVSDDSKVVLVDSDSFQ 165 (637)
T ss_pred ccCCCccchhhhcCchh-hcccCCccccHHHHHHHHHHHHHHHHHHhc---CCcccccCccceeeecCceEEEEccccee
Confidence 988765 3333333211 111235678999999999999999999998 99999999999999999999998854322
Q ss_pred hcccccCCCCCCcceeecccccccccCCCccC-C-----CCCcccchhhHHHHHHHHHhC-CCCCCCCCC---Cchhhh-
Q 005045 549 FLFEISDNPSKNQTVSIGLKGSIGYIPPEHMN-G-----QVSILGDIYSYGILLLEMFTG-KRPTGDMFK---DDFSIH- 617 (717)
Q Consensus 549 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~-~-----~~~~~sDvwslG~vl~elltg-~~p~~~~~~---~~~~~~- 617 (717)
.. ..........|...|.+||.-+ + .-+...|.|.||+++++++.| .+||.+... ......
T Consensus 166 i~--------~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~ 237 (637)
T COG4248 166 IN--------ANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLET 237 (637)
T ss_pred ec--------cCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchh
Confidence 21 1122233466889999999844 2 247889999999999999995 999988632 111111
Q ss_pred HHHHhcCChhhhhhcCCCCCCCCCCcHHHHHHHHHHHHHHhhhhhhhcchhhhHHHHHHHHHHhhccCCCC--cCCCCCH
Q 005045 618 MFVSMALPDHVMDILDPSMPLDEENDEEQIEEVIEEKEMMIHIDLEVNTKNKLEECFVSVLRIGLMCSTTS--PRERIAM 695 (717)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~--p~~Rps~ 695 (717)
......+...-.. .+.+...+ ..+...--+..+.-++.+|+... +.-|||+
T Consensus 238 ~Ia~g~f~ya~~~--~~g~~p~P-------------------------~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a 290 (637)
T COG4248 238 DIAHGRFAYASDQ--RRGLKPPP-------------------------RSIPLSMLPPDVQALFQQAFTESGVATPRPTA 290 (637)
T ss_pred hhhcceeeechhc--cCCCCCCC-------------------------CCCChhhcCHHHHHHHHHHhcccCCCCCCCCH
Confidence 1222222111000 00000000 00011112444566777887753 4579999
Q ss_pred HHHHHHHHHHHHHHHh
Q 005045 696 NVVVNNLKTIRNCFLE 711 (717)
Q Consensus 696 ~eil~~l~~i~~~~~~ 711 (717)
+.++..|..+++++.+
T Consensus 291 ~aW~aAl~al~~~L~~ 306 (637)
T COG4248 291 KAWVAALDALRQQLKK 306 (637)
T ss_pred HHHHHHHHHHHHhhhh
Confidence 9999999999988765
No 475
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=99.20 E-value=1.5e-11 Score=140.97 Aligned_cols=134 Identities=21% Similarity=0.320 Sum_probs=92.9
Q ss_pred eeCCcc---eecEEEcCCCcCcCCCCcCCcCCCCCCEEECCCCc--ccccCCcCCCCCCCCCEEEccCccccccCCcccc
Q 005045 5 MIPEHL---MTQDLNLTYNYLSGKIPTNLSHCTELRSFEASVND--FVGQIPNQLSSLTKLEIIGLGGSNLTGNVPAWIG 79 (717)
Q Consensus 5 ~~p~~~---~~~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~--l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~ 79 (717)
.+|+.. ..+...+-+|.+. .++.+.. ++.|++|-+..|. +.....+.|..++.|++|||++|.=.+.+|..++
T Consensus 515 ~~~~~~~~~~~rr~s~~~~~~~-~~~~~~~-~~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~ 592 (889)
T KOG4658|consen 515 EIPQVKSWNSVRRMSLMNNKIE-HIAGSSE-NPKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIG 592 (889)
T ss_pred ccccccchhheeEEEEeccchh-hccCCCC-CCccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHh
Confidence 345444 4477777777776 4444433 3468787777775 4433334467788888888887764447888888
Q ss_pred CCCCCCEEeccCCcCcccCChhhhccCCCCeEeccCCCCCCCCCccccCCCCccEEEcccCc
Q 005045 80 NFSSLKALSLAWNNLRGSIPNELGQLSGLGFFTLYGNFISGIIPSSIYNISSIYYFSVTQNQ 141 (717)
Q Consensus 80 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~ 141 (717)
+|-+|++|+|++..|+ .+|..+.+|+.|.+||+..+.-....|.....|++|++|.+-.-.
T Consensus 593 ~Li~LryL~L~~t~I~-~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~ 653 (889)
T KOG4658|consen 593 ELVHLRYLDLSDTGIS-HLPSGLGNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPRSA 653 (889)
T ss_pred hhhhhhcccccCCCcc-ccchHHHHHHhhheeccccccccccccchhhhcccccEEEeeccc
Confidence 8888888888888887 777788888888888888777655556667777888887776544
No 476
>PLN03150 hypothetical protein; Provisional
Probab=99.18 E-value=3.9e-11 Score=134.98 Aligned_cols=112 Identities=35% Similarity=0.566 Sum_probs=91.1
Q ss_pred ccEEecCCCccCCCCCccccCCCCCCEEEccCCcCccccchhhhcCCCCCeEEcccCcCCCCCCcccccccccceeeccc
Q 005045 260 LRRLTMGENLMHGNIPVGIGNLVNLNLLGLEGNNLSGSVPEVIGRLNKLEGLGLNVNKFSGLIPSSLGNLTILTRLWMEE 339 (717)
Q Consensus 260 L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~ 339 (717)
+..|+|++|.+.+.+|..+..+++|+.|+|++|++++.+|..++.+++|+.|+|++|++++.+|..++.+++|+.|+|++
T Consensus 420 v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~ 499 (623)
T PLN03150 420 IDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNG 499 (623)
T ss_pred EEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcC
Confidence 67788888888888888888888888888888888888888888888888888888888888888888888888888888
Q ss_pred ccccccCCcCccCc-CCCceEEeecccCCCCCC
Q 005045 340 NRLEGSIPPSLGNC-QKLLVLNLSSNDLNGTIP 371 (717)
Q Consensus 340 N~l~~~~p~~~~~l-~~L~~L~l~~N~l~~~~p 371 (717)
|++++.+|..+..+ .++..+++.+|+..+.+|
T Consensus 500 N~l~g~iP~~l~~~~~~~~~l~~~~N~~lc~~p 532 (623)
T PLN03150 500 NSLSGRVPAALGGRLLHRASFNFTDNAGLCGIP 532 (623)
T ss_pred CcccccCChHHhhccccCceEEecCCccccCCC
Confidence 88888888877653 466778888887654444
No 477
>PLN03150 hypothetical protein; Provisional
Probab=99.17 E-value=5.1e-11 Score=134.03 Aligned_cols=109 Identities=34% Similarity=0.572 Sum_probs=97.2
Q ss_pred CCCEEECCCCcccccCCcCCCCCCCCCEEEccCccccccCCccccCCCCCCEEeccCCcCcccCChhhhccCCCCeEecc
Q 005045 35 ELRSFEASVNDFVGQIPNQLSSLTKLEIIGLGGSNLTGNVPAWIGNFSSLKALSLAWNNLRGSIPNELGQLSGLGFFTLY 114 (717)
Q Consensus 35 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 114 (717)
.++.|+|++|.+.+.+|..++.+++|+.|+|++|.+++.+|..++.+++|+.|+|++|++++.+|..++.+++|+.|+|+
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls 498 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLN 498 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECc
Confidence 37889999999999999999999999999999999998999889999999999999999999999999999999999999
Q ss_pred CCCCCCCCCccccCC-CCccEEEcccCccc
Q 005045 115 GNFISGIIPSSIYNI-SSIYYFSVTQNQLH 143 (717)
Q Consensus 115 ~N~i~~~~~~~~~~l-~~L~~L~L~~N~l~ 143 (717)
+|++++.+|..+..+ .++..+++++|...
T Consensus 499 ~N~l~g~iP~~l~~~~~~~~~l~~~~N~~l 528 (623)
T PLN03150 499 GNSLSGRVPAALGGRLLHRASFNFTDNAGL 528 (623)
T ss_pred CCcccccCChHHhhccccCceEEecCCccc
Confidence 999999999888764 46778899998765
No 478
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.15 E-value=1.7e-10 Score=108.30 Aligned_cols=136 Identities=24% Similarity=0.192 Sum_probs=96.8
Q ss_pred ccccCcccccceEEEEeCC-------CchhhhHHhHhh-------------h---------hhHH----HHHHHHHHHHh
Q 005045 394 ENLIGTGSFGSVYKGTLGD-------GTIVAIKVLKLQ-------------Q---------QGAL----KSFIDECNALK 440 (717)
Q Consensus 394 ~~~ig~g~~g~v~~~~~~~-------~~~vavK~~~~~-------------~---------~~~~----~~~~~e~~~l~ 440 (717)
...||.|--+.||.|...+ +..+|+|++... + .... ...++|++.|+
T Consensus 2 ~g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~ 81 (197)
T cd05146 2 NGCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLK 81 (197)
T ss_pred CCccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHH
Confidence 3568899999999998542 478899987421 0 0111 23348999999
Q ss_pred cCC--CCceeEEEEeeccccCCCCceEEEEEecCCCCChhh-hccCCCCCcccccccCHHHHHHHHHHHHHHHHHH-Hhc
Q 005045 441 STR--HRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQ-WLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYL-HHH 516 (717)
Q Consensus 441 ~l~--h~ni~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~-~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~L-H~~ 516 (717)
++. .-++++.++. ...++||||+.+..+.. .++. ..++......++.+++.++..+ |+.
T Consensus 82 rl~~~Gv~vP~pi~~---------~~~~lvME~Ig~~~~~~~~Lkd--------~~~~~~~~~~i~~~i~~~l~~l~H~~ 144 (197)
T cd05146 82 RMQKAGIPCPEVVVL---------KKHVLVMSFIGDDQVPAPKLKD--------AKLNDEEMKNAYYQVLSMMKQLYKEC 144 (197)
T ss_pred HHHHcCCCCCeEEEe---------cCCEEEEEEcCCCCccchhhhc--------cccCHHHHHHHHHHHHHHHHHHHHhC
Confidence 983 4566666654 14589999996543321 1211 1234456677889999999999 776
Q ss_pred CCCCeeecCCCCCCEEeCCCCceEEeeeccchhc
Q 005045 517 CDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFL 550 (717)
Q Consensus 517 ~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~ 550 (717)
|+||||+++.||++. ++.+.|+|||.+...
T Consensus 145 ---glVHGDLs~~NIL~~-~~~v~iIDF~qav~~ 174 (197)
T cd05146 145 ---NLVHADLSEYNMLWH-DGKVWFIDVSQSVEP 174 (197)
T ss_pred ---CeecCCCCHHHEEEE-CCcEEEEECCCceeC
Confidence 999999999999996 578999999988754
No 479
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.15 E-value=8.3e-11 Score=105.11 Aligned_cols=141 Identities=25% Similarity=0.291 Sum_probs=100.9
Q ss_pred cccccCcccccceEEEEeCCCchhhhHHhHhh--------hhhHHHHHHHHHHHHhcCCCCce--eEEEEeeccccCCCC
Q 005045 393 KENLIGTGSFGSVYKGTLGDGTIVAIKVLKLQ--------QQGALKSFIDECNALKSTRHRNI--LRVITACSSVDLEGN 462 (717)
Q Consensus 393 ~~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~--------~~~~~~~~~~e~~~l~~l~h~ni--~~~~~~~~~~~~~~~ 462 (717)
....+-+|+-+.|+.+.+ .|+.++||.-... ..-..++...|++.+.++.--.| ++++.+ +.
T Consensus 11 ~l~likQGAEArv~~~~~-~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~-------D~ 82 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSF-SGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFI-------DT 82 (229)
T ss_pred cceeeeccceeeEeeecc-CCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEE-------ec
Confidence 577889999999999988 4777777754322 12235777889999998843332 222222 22
Q ss_pred ceEEEEEecCCC-CChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCC---c
Q 005045 463 DFKALVFEFMSN-GNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDM---T 538 (717)
Q Consensus 463 ~~~~lv~e~~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~---~ 538 (717)
..-+|+|||++| .++.+++..... ..........++++|-+.+.-||.+ +|+||||.++||++..++ .
T Consensus 83 ~~~~i~ME~~~g~~~vk~~i~~~~~-----~~~~d~~~~~~~~~iG~~igklH~n---diiHGDLTTSNill~~~~~~~~ 154 (229)
T KOG3087|consen 83 YGGQIYMEFIDGASTVKDFILSTME-----DESEDEGLAELARRIGELIGKLHDN---DIIHGDLTTSNILLRSDGNQIT 154 (229)
T ss_pred CCCeEEEEeccchhHHHHHHHHHcc-----CcccchhHHHHHHHHHHHHHHhhhC---CeecccccccceEEecCCCcCc
Confidence 345799999976 378888765432 1222223367899999999999998 999999999999998666 4
Q ss_pred eEEeeeccchh
Q 005045 539 AHVGDFGLAKF 549 (717)
Q Consensus 539 ~kl~Dfg~~~~ 549 (717)
+.++|||++..
T Consensus 155 ~~lIdfgls~~ 165 (229)
T KOG3087|consen 155 PILIDFGLSSV 165 (229)
T ss_pred eEEEeecchhc
Confidence 58999999864
No 480
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.11 E-value=6.9e-11 Score=128.19 Aligned_cols=147 Identities=20% Similarity=0.192 Sum_probs=96.5
Q ss_pred ccccccccccccCcccccceEEEEeCC-CchhhhHHhHhhhh----------------------------------hHHH
Q 005045 386 KSTDNFSKENLIGTGSFGSVYKGTLGD-GTIVAIKVLKLQQQ----------------------------------GALK 430 (717)
Q Consensus 386 ~~~~~y~~~~~ig~g~~g~v~~~~~~~-~~~vavK~~~~~~~----------------------------------~~~~ 430 (717)
.....|.. +.+|+|+.|.||.|+.++ |+.||||+..+.-. +..+
T Consensus 117 ~~F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~ 195 (537)
T PRK04750 117 EWFDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEK 195 (537)
T ss_pred HHHHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHH
Confidence 33556776 789999999999999876 99999998853210 0011
Q ss_pred ------HHHHHHHHHhcC----CCCceeEEEEeeccccCCCCceEEEEEecCCCCChhhhc--cCCCCCcccccccCHHH
Q 005045 431 ------SFIDECNALKST----RHRNILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWL--HPSPAEHYQFKKLSVIQ 498 (717)
Q Consensus 431 ------~~~~e~~~l~~l----~h~ni~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l--~~~~~~~~~~~~~~~~~ 498 (717)
.+.+|+..+.++ .+...+.+...+.+ -....++||||++|+.+.++- .... .....+....
T Consensus 196 ~l~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d----~st~~VLvmE~i~G~~l~d~~~l~~~g---~d~~~la~~~ 268 (537)
T PRK04750 196 TLHDELDLMREAANASQLRRNFEDSDMLYVPEVYWD----YCSETVMVMERMYGIPVSDVAALRAAG---TDMKLLAERG 268 (537)
T ss_pred HHHHhhCHHHHHHHHHHHHHHccCCCCeecceeecc----cCCCceEEEeeecCccHHhHHHHHhcC---CCHHHHHHHH
Confidence 134455555444 24444444444322 124568999999999998742 2111 0112333334
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCC----ceEEeeeccchhc
Q 005045 499 RLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDM----TAHVGDFGLAKFL 550 (717)
Q Consensus 499 ~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~----~~kl~Dfg~~~~~ 550 (717)
+..++.|+. .. |++|+|+||.||+++.+| +++++|||++..+
T Consensus 269 v~~~~~Qif-------~~---GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l 314 (537)
T PRK04750 269 VEVFFTQVF-------RD---GFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSL 314 (537)
T ss_pred HHHHHHHHH-------hC---CeeeCCCChHHeEEecCCCCCCeEEEEecceEEEC
Confidence 444444443 34 999999999999999888 9999999998766
No 481
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.09 E-value=1.8e-10 Score=108.10 Aligned_cols=131 Identities=20% Similarity=0.171 Sum_probs=93.9
Q ss_pred ccccCcccccceEEEEeCCCchhhhHHhHhhhhhHHHHHHHHHHHHhcCCCCce-eEEEEeeccccCCCCceEEEEEecC
Q 005045 394 ENLIGTGSFGSVYKGTLGDGTIVAIKVLKLQQQGALKSFIDECNALKSTRHRNI-LRVITACSSVDLEGNDFKALVFEFM 472 (717)
Q Consensus 394 ~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni-~~~~~~~~~~~~~~~~~~~lv~e~~ 472 (717)
++.++.|..+.||.+... ++.+++|+...... ....+..|+++++.+.+.++ ++++... . ...++||||+
T Consensus 3 ~~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~-----~--~~~~lv~e~i 73 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFD-----P--ETGVLITEFI 73 (170)
T ss_pred eeecCCcccCceEEEEEC-CeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEe-----C--CCCeEEEEec
Confidence 467889999999999875 77799998764432 12345778888888855443 3444432 1 1347999999
Q ss_pred CCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcC--CCCeeecCCCCCCEEeCCCCceEEeeeccchh
Q 005045 473 SNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHC--DTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKF 549 (717)
Q Consensus 473 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~--~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~ 549 (717)
+|.++.+.- .....++.+++++++.||+.. ..+++|||++|.||+++ ++.++++|||.+..
T Consensus 74 ~G~~l~~~~---------------~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~ 136 (170)
T cd05151 74 EGSELLTED---------------FSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM 136 (170)
T ss_pred CCCcccccc---------------ccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence 998775430 011245788999999999972 11259999999999998 67899999998753
No 482
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.07 E-value=5.6e-10 Score=100.62 Aligned_cols=129 Identities=24% Similarity=0.293 Sum_probs=95.6
Q ss_pred cccCcccccceEEEEeCCCchhhhHHhHhhh--------hhHHHHHHHHHHHHhcCC--CCceeEEEEeeccccCCCCce
Q 005045 395 NLIGTGSFGSVYKGTLGDGTIVAIKVLKLQQ--------QGALKSFIDECNALKSTR--HRNILRVITACSSVDLEGNDF 464 (717)
Q Consensus 395 ~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~--------~~~~~~~~~e~~~l~~l~--h~ni~~~~~~~~~~~~~~~~~ 464 (717)
..+++|+-+.+|.+.+. |..+++|.-.+.. .-...+..+|++++.++. .-+.+.++++ +.+.
T Consensus 2 ~~i~~GAEa~i~~~~~~-g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dv-------D~~~ 73 (204)
T COG3642 2 DLIKQGAEAIIYLTDFL-GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDV-------DPDN 73 (204)
T ss_pred chhhCCcceeEEeeecc-CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEE-------cCCC
Confidence 35789999999998763 4446666543221 112466778999998874 3444455554 2335
Q ss_pred EEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeee
Q 005045 465 KALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDF 544 (717)
Q Consensus 465 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Df 544 (717)
..|+|||++|..|.+++... ...++..+-.-+.-||.+ ||+|||+.++||+++.++ +.++||
T Consensus 74 ~~I~me~I~G~~lkd~l~~~--------------~~~~~r~vG~~vg~lH~~---givHGDLTtsNiIl~~~~-i~~IDf 135 (204)
T COG3642 74 GLIVMEYIEGELLKDALEEA--------------RPDLLREVGRLVGKLHKA---GIVHGDLTTSNIILSGGR-IYFIDF 135 (204)
T ss_pred CEEEEEEeCChhHHHHHHhc--------------chHHHHHHHHHHHHHHhc---CeecCCCccceEEEeCCc-EEEEEC
Confidence 67999999999999888643 245677888888999998 999999999999997654 999999
Q ss_pred ccchh
Q 005045 545 GLAKF 549 (717)
Q Consensus 545 g~~~~ 549 (717)
|++..
T Consensus 136 GLg~~ 140 (204)
T COG3642 136 GLGEF 140 (204)
T ss_pred Ccccc
Confidence 99874
No 483
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=99.05 E-value=1.2e-10 Score=133.65 Aligned_cols=183 Identities=21% Similarity=0.282 Sum_probs=131.0
Q ss_pred CcceecEEEcCCCc--CcCCCCcCCcCCCCCCEEECCCCcccccCCcCCCCCCCCCEEEccCccccccCCccccCCCCCC
Q 005045 8 EHLMTQDLNLTYNY--LSGKIPTNLSHCTELRSFEASVNDFVGQIPNQLSSLTKLEIIGLGGSNLTGNVPAWIGNFSSLK 85 (717)
Q Consensus 8 ~~~~~~~L~L~~n~--l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~ 85 (717)
....+++|-+.+|. +....++.|..++.|+.|||++|.--+.+|..+++|-+|++|+|++..|+ .+|..+++|..|.
T Consensus 543 ~~~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL~L~~t~I~-~LP~~l~~Lk~L~ 621 (889)
T KOG4658|consen 543 ENPKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYLDLSDTGIS-HLPSGLGNLKKLI 621 (889)
T ss_pred CCCccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhcccccCCCcc-ccchHHHHHHhhh
Confidence 33378999999997 66455556888999999999998777799999999999999999999999 8999999999999
Q ss_pred EEeccCCcCcccCChhhhccCCCCeEeccCCCC--CCCCCccccCCCCccEEEcccCcccccCCcccccCCCCcc----e
Q 005045 86 ALSLAWNNLRGSIPNELGQLSGLGFFTLYGNFI--SGIIPSSIYNISSIYYFSVTQNQLHGQLPTDVGLTLPNLK----I 159 (717)
Q Consensus 86 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i--~~~~~~~~~~l~~L~~L~L~~N~l~~~l~~~~~~~l~~L~----~ 159 (717)
+|++.++.-...+|..+..+.+|++|.|..-.. ....-..+.+|.+|+.|........ +-... ..+..|. .
T Consensus 622 ~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~~~~~~~~l~el~~Le~L~~ls~~~~s~~--~~e~l-~~~~~L~~~~~~ 698 (889)
T KOG4658|consen 622 YLNLEVTGRLESIPGILLELQSLRVLRLPRSALSNDKLLLKELENLEHLENLSITISSVL--LLEDL-LGMTRLRSLLQS 698 (889)
T ss_pred eeccccccccccccchhhhcccccEEEeeccccccchhhHHhhhcccchhhheeecchhH--hHhhh-hhhHHHHHHhHh
Confidence 999999987667788888899999999976542 2233334455555555555333220 00111 1333333 2
Q ss_pred eecccccccccCCccCCCCCCCCEEeccCccccccC
Q 005045 160 FAGAVNYFTGSIPVSLSNASNLQVLDFAENGLTGTI 195 (717)
Q Consensus 160 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~ 195 (717)
+.+.++... ..+..+..+.+|+.|.+.++.+....
T Consensus 699 l~~~~~~~~-~~~~~~~~l~~L~~L~i~~~~~~e~~ 733 (889)
T KOG4658|consen 699 LSIEGCSKR-TLISSLGSLGNLEELSILDCGISEIV 733 (889)
T ss_pred hhhcccccc-eeecccccccCcceEEEEcCCCchhh
Confidence 332232222 34556777888888888888776433
No 484
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=99.01 E-value=2.2e-10 Score=86.64 Aligned_cols=60 Identities=27% Similarity=0.482 Sum_probs=32.6
Q ss_pred CCCEEeccCCcCcccCChhhhccCCCCeEeccCCCCCCCCCccccCCCCccEEEcccCcc
Q 005045 83 SLKALSLAWNNLRGSIPNELGQLSGLGFFTLYGNFISGIIPSSIYNISSIYYFSVTQNQL 142 (717)
Q Consensus 83 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l 142 (717)
+|++|+|++|+|+.+.++.|.++++|++|++++|.++.+.+++|.++++|++|++++|+|
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 455555555555544445555555555555555555555555555555555555555543
No 485
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.96 E-value=4.5e-10 Score=84.86 Aligned_cols=60 Identities=30% Similarity=0.460 Sum_probs=34.5
Q ss_pred CCCEEEccCccccccCCccccCCCCCCEEeccCCcCcccCChhhhccCCCCeEeccCCCC
Q 005045 59 KLEIIGLGGSNLTGNVPAWIGNFSSLKALSLAWNNLRGSIPNELGQLSGLGFFTLYGNFI 118 (717)
Q Consensus 59 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i 118 (717)
+|++|++++|+|+...+..|.++++|++|++++|+|+...+++|.++++|++|++++|+|
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 455556666655544445555556666666666666555555566666666666665553
No 486
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=98.92 E-value=8.1e-10 Score=122.64 Aligned_cols=212 Identities=25% Similarity=0.314 Sum_probs=145.9
Q ss_pred ccccccccccccccCcccccceEEEEe-CCCchhhhHHhHhhh---hhHHHHHHHHHHHHhcCCCCceeEEEEeeccccC
Q 005045 384 ISKSTDNFSKENLIGTGSFGSVYKGTL-GDGTIVAIKVLKLQQ---QGALKSFIDECNALKSTRHRNILRVITACSSVDL 459 (717)
Q Consensus 384 ~~~~~~~y~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~ 459 (717)
...+.+.+.+.+.+.+|.++.++.+.- .+|...+.|+..... ....+....+-.++....+|.+++.... +
T Consensus 799 yrsS~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s-----~ 873 (1205)
T KOG0606|consen 799 YRSSPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPS-----F 873 (1205)
T ss_pred ccCCCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCC-----C
Confidence 445677888888999999999998873 356555666654332 1112222233333333455666554443 3
Q ss_pred CCCceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCce
Q 005045 460 EGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTA 539 (717)
Q Consensus 460 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~ 539 (717)
......+++++|+.++++...++... ..+..-++.....+..+.++||.. .+.|+|++|.++++..+|..
T Consensus 874 ~~rsP~~L~~~~~~~~~~~Skl~~~~-------~~saepaRs~i~~~vqs~e~L~s~---~r~h~~~~p~~~l~~~~gh~ 943 (1205)
T KOG0606|consen 874 PCRSPLPLVGHYLNGGDLPSKLHNSG-------CLSAEPARSPILERVQSLESLHSS---LRKHRDLKPDSLLIAYDGHR 943 (1205)
T ss_pred CCCCCcchhhHHhccCCchhhhhcCC-------CcccccccchhHHHHhhhhccccc---hhhcccccccchhhcccCCc
Confidence 34457899999999999988887653 234444455666788999999996 68999999999999999999
Q ss_pred EEeeeccchhcccc------------------------cCCCCCCcceeecccccccccCCCccCC-CCCcccchhhHHH
Q 005045 540 HVGDFGLAKFLFEI------------------------SDNPSKNQTVSIGLKGSIGYIPPEHMNG-QVSILGDIYSYGI 594 (717)
Q Consensus 540 kl~Dfg~~~~~~~~------------------------~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~sDvwslG~ 594 (717)
+++|||........ .....+.........+|+.|.+||...| ..+..+|+|+.|+
T Consensus 944 ~l~~~~t~~~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~ 1023 (1205)
T KOG0606|consen 944 PLTDFGTLSKVGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGV 1023 (1205)
T ss_pred ccCccccccccccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhh
Confidence 99999733221100 0000111122334569999999999554 5899999999999
Q ss_pred HHHHHHhCCCCCCCCC
Q 005045 595 LLLEMFTGKRPTGDMF 610 (717)
Q Consensus 595 vl~elltg~~p~~~~~ 610 (717)
++++.++|..||....
T Consensus 1024 ~l~e~l~g~pp~na~t 1039 (1205)
T KOG0606|consen 1024 CLFEVLTGIPPFNAET 1039 (1205)
T ss_pred hhhhhhcCCCCCCCcc
Confidence 9999999999997653
No 487
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.90 E-value=3.6e-09 Score=101.32 Aligned_cols=138 Identities=22% Similarity=0.153 Sum_probs=101.7
Q ss_pred ccccccccccCcccccceEEEEeCCCchhhhHHhHhhh----------------------hhHHHHHHHHHHHHhcCCCC
Q 005045 388 TDNFSKENLIGTGSFGSVYKGTLGDGTIVAIKVLKLQQ----------------------QGALKSFIDECNALKSTRHR 445 (717)
Q Consensus 388 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~----------------------~~~~~~~~~e~~~l~~l~h~ 445 (717)
..=+.+..+||.|--|.||.|..++|.++|+|...... .-.+...++|.++|+++...
T Consensus 90 ~~ve~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~ 169 (304)
T COG0478 90 GIVEAIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPE 169 (304)
T ss_pred ChHHhhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhc
Confidence 33456778999999999999999999999999753210 11245578899999999544
Q ss_pred --ceeEEEEeeccccCCCCceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeee
Q 005045 446 --NILRVITACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAH 523 (717)
Q Consensus 446 --ni~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH 523 (717)
.+++.++. +..++|||+++|..|...-- .......++..|+.-+..+-.. ||||
T Consensus 170 G~~VP~P~~~---------nRHaVvMe~ieG~eL~~~r~------------~~en~~~il~~il~~~~~~~~~---GiVH 225 (304)
T COG0478 170 GVKVPKPIAW---------NRHAVVMEYIEGVELYRLRL------------DVENPDEILDKILEEVRKAYRR---GIVH 225 (304)
T ss_pred CCCCCCcccc---------ccceeeeehcccceeecccC------------cccCHHHHHHHHHHHHHHHHHc---Cccc
Confidence 67776665 35689999998866654321 2233444555666666555555 9999
Q ss_pred cCCCCCCEEeCCCCceEEeeeccchh
Q 005045 524 CDLKPSNVLLDKDMTAHVGDFGLAKF 549 (717)
Q Consensus 524 ~dlkp~NIll~~~~~~kl~Dfg~~~~ 549 (717)
||+++-||+++++|.+.++||--+..
T Consensus 226 GDlSefNIlV~~dg~~~vIDwPQ~v~ 251 (304)
T COG0478 226 GDLSEFNILVTEDGDIVVIDWPQAVP 251 (304)
T ss_pred cCCchheEEEecCCCEEEEeCccccc
Confidence 99999999999999999999976553
No 488
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=98.90 E-value=1.3e-09 Score=115.16 Aligned_cols=202 Identities=24% Similarity=0.216 Sum_probs=147.1
Q ss_pred CCccc-ccccccccccccccCcccccceEEEEe--CCCchhhhHHhHhhhhh--HHHHHHHHHHHHhcC-CCCceeEEEE
Q 005045 379 MSYSD-ISKSTDNFSKENLIGTGSFGSVYKGTL--GDGTIVAIKVLKLQQQG--ALKSFIDECNALKST-RHRNILRVIT 452 (717)
Q Consensus 379 ~s~~~-~~~~~~~y~~~~~ig~g~~g~v~~~~~--~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l-~h~ni~~~~~ 452 (717)
+.-.+ -.+...+|..+..||.+.++.|+.+.. .++..+++|.....-.. ....-..|+.+...+ .|.++++.+.
T Consensus 254 ~~~~~~~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~ 333 (524)
T KOG0601|consen 254 FTTSDWTSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNS 333 (524)
T ss_pred ecccccceeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCC
Confidence 55555 667788999999999999999998873 36778888887644322 222234555555555 5778887666
Q ss_pred eeccccCCCCceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEE
Q 005045 453 ACSSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVL 532 (717)
Q Consensus 453 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIl 532 (717)
.+. .....|+=-|||++++........ ..+.+...+.+..|++.++.++|+. .++|+|++|+||+
T Consensus 334 ~W~-----~~r~~~ip~e~~~~~s~~l~~~~~-------~~~d~~~~~~~~~q~~~~l~~i~s~---~~~~~d~~psni~ 398 (524)
T KOG0601|consen 334 SWS-----QLRQGYIPLEFCEGGSSSLRSVTS-------QMLDEDPRLRLTAQILTALNVIHSK---LFVHLDVKPSNIL 398 (524)
T ss_pred Ccc-----ccccccCchhhhcCcchhhhhHHH-------HhcCcchhhhhHHHHHhccccccch---hhhccccccccee
Confidence 643 334667999999988877655211 5677888899999999999999997 9999999999999
Q ss_pred eCCC-CceEEeeeccchhcccccCCCCCCcceeeccccccccc-CCCccCC--CCCcccchhhHHHHHHHHHhCCCC
Q 005045 533 LDKD-MTAHVGDFGLAKFLFEISDNPSKNQTVSIGLKGSIGYI-PPEHMNG--QVSILGDIYSYGILLLEMFTGKRP 605 (717)
Q Consensus 533 l~~~-~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~y~-aPE~~~~--~~~~~sDvwslG~vl~elltg~~p 605 (717)
+..+ +..+++|||.+..+.. ..+...+.-.++ .+|++.. .+..++|++|||..+.+..+|.+.
T Consensus 399 i~~~~~~~~~~~~~~~t~~~~----------~~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~l 465 (524)
T KOG0601|consen 399 ISNDGFFSKLGDFGCWTRLAF----------SSGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPL 465 (524)
T ss_pred eccchhhhhccccccccccce----------ecccccccccccccchhhccccccccccccccccccccccccCccc
Confidence 9876 7889999998864311 111122333444 2555433 367899999999999999998764
No 489
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=98.90 E-value=7.1e-09 Score=102.00 Aligned_cols=145 Identities=21% Similarity=0.210 Sum_probs=106.3
Q ss_pred cccCcccccceEEEEeCCCchhhhHHhHhhhh-hHHHHHHHHHHHHhcCCC--CceeEEEEeeccccCCCCceEEEEEec
Q 005045 395 NLIGTGSFGSVYKGTLGDGTIVAIKVLKLQQQ-GALKSFIDECNALKSTRH--RNILRVITACSSVDLEGNDFKALVFEF 471 (717)
Q Consensus 395 ~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h--~ni~~~~~~~~~~~~~~~~~~~lv~e~ 471 (717)
+.++.|..+.+|++...+|+.+++|....... .....+..|+++++.+.+ ..+++++....... ..+..++||||
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~--~~~~~~~v~e~ 81 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPS--VLGTPFYVMER 81 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCC--ccCCceEEEEE
Confidence 56899999999999876678899998764432 134567889999999865 34566666643211 11356899999
Q ss_pred CCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcC----------------------------------
Q 005045 472 MSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHC---------------------------------- 517 (717)
Q Consensus 472 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~---------------------------------- 517 (717)
++|.++.+.+.. ..++......++.+++++++.||+..
T Consensus 82 i~G~~l~~~~~~--------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (223)
T cd05154 82 VDGRVLRDRLLR--------PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDE 153 (223)
T ss_pred eCCEecCCCCCC--------CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccc
Confidence 999888775531 23566667778888888888888421
Q ss_pred -------------------CCCeeecCCCCCCEEeCC--CCceEEeeeccchh
Q 005045 518 -------------------DTPIAHCDLKPSNVLLDK--DMTAHVGDFGLAKF 549 (717)
Q Consensus 518 -------------------~~~ivH~dlkp~NIll~~--~~~~kl~Dfg~~~~ 549 (717)
...++|+|++|.||+++. ++.+.|+||+.+..
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 154 PPAMERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred cHHHHHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 245899999999999998 66789999998764
No 490
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.87 E-value=4.5e-09 Score=98.50 Aligned_cols=124 Identities=23% Similarity=0.226 Sum_probs=79.4
Q ss_pred eEEEEeCCCchhhhHHhHhh--------------------------hhhHHHHHHHHHHHHhcCCCC--ceeEEEEeecc
Q 005045 405 VYKGTLGDGTIVAIKVLKLQ--------------------------QQGALKSFIDECNALKSTRHR--NILRVITACSS 456 (717)
Q Consensus 405 v~~~~~~~~~~vavK~~~~~--------------------------~~~~~~~~~~e~~~l~~l~h~--ni~~~~~~~~~ 456 (717)
||.|...+|..+|+|+.... ......+..+|++.|.++... ++++.+++.
T Consensus 2 Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~-- 79 (188)
T PF01163_consen 2 VYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN-- 79 (188)
T ss_dssp EEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE--
T ss_pred EEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe--
Confidence 67777666777777765321 011245678899999999654 567776652
Q ss_pred ccCCCCceEEEEEecCC--CCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHH-HHhcCCCCeeecCCCCCCEEe
Q 005045 457 VDLEGNDFKALVFEFMS--NGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDY-LHHHCDTPIAHCDLKPSNVLL 533 (717)
Q Consensus 457 ~~~~~~~~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~-LH~~~~~~ivH~dlkp~NIll 533 (717)
..++||||++ |..+..+... .++......++.+++..+.. +|+. |++|||+++.||++
T Consensus 80 -------~~~ivME~I~~~G~~~~~l~~~---------~~~~~~~~~~~~~il~~~~~~~~~~---givHGDLs~~NIlv 140 (188)
T PF01163_consen 80 -------RNVIVMEYIGEDGVPLPRLKDV---------DLSPEEPKELLEEILEEIIKMLHKA---GIVHGDLSEYNILV 140 (188)
T ss_dssp -------TTEEEEE--EETTEEGGCHHHC---------GGGGSTHHHHHHHHHHHHHHHHHCT---TEEESS-STTSEEE
T ss_pred -------CCEEEEEecCCCccchhhHHhc---------cccchhHHHHHHHHHHHHHHHHHhc---CceecCCChhhEEe
Confidence 3379999997 5555443321 11133456678888886666 4676 99999999999999
Q ss_pred CCCCceEEeeeccchhc
Q 005045 534 DKDMTAHVGDFGLAKFL 550 (717)
Q Consensus 534 ~~~~~~kl~Dfg~~~~~ 550 (717)
+++ .+.++|||.+...
T Consensus 141 ~~~-~~~iIDf~qav~~ 156 (188)
T PF01163_consen 141 DDG-KVYIIDFGQAVDS 156 (188)
T ss_dssp ETT-CEEE--GTTEEET
T ss_pred ecc-eEEEEecCcceec
Confidence 877 9999999988753
No 491
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.85 E-value=4.2e-11 Score=126.92 Aligned_cols=127 Identities=27% Similarity=0.253 Sum_probs=87.1
Q ss_pred CCCCEEEeecCcccCcCchhhhhccccccEEecCCCccCCCCCccccCCCCCCEEEccCCcCccccch-hhhcCCCCCeE
Q 005045 233 TSLEVLGLARNSFGGEMPISIANLSTHLRRLTMGENLMHGNIPVGIGNLVNLNLLGLEGNNLSGSVPE-VIGRLNKLEGL 311 (717)
Q Consensus 233 ~~L~~L~L~~N~l~~~~p~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~~l~~L~~L 311 (717)
..|.+.+.+.|.+. .+..++.-+ +.|+.|+|++|+++.. +.+..++.|++|||++|.+. .+|. ...++. |..|
T Consensus 164 n~L~~a~fsyN~L~-~mD~SLqll-~ale~LnLshNk~~~v--~~Lr~l~~LkhLDlsyN~L~-~vp~l~~~gc~-L~~L 237 (1096)
T KOG1859|consen 164 NKLATASFSYNRLV-LMDESLQLL-PALESLNLSHNKFTKV--DNLRRLPKLKHLDLSYNCLR-HVPQLSMVGCK-LQLL 237 (1096)
T ss_pred hhHhhhhcchhhHH-hHHHHHHHH-HHhhhhccchhhhhhh--HHHHhcccccccccccchhc-cccccchhhhh-heee
Confidence 35677777777777 666666655 4777788888877633 26777778888888888877 4553 223333 7778
Q ss_pred EcccCcCCCCCCcccccccccceeecccccccccCC-cCccCcCCCceEEeecccCC
Q 005045 312 GLNVNKFSGLIPSSLGNLTILTRLWMEENRLEGSIP-PSLGNCQKLLVLNLSSNDLN 367 (717)
Q Consensus 312 ~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~ 367 (717)
.+++|.++.. ..+.+|++|+.||+++|-|.+.-- ..++.|..|+.|+|.|||+.
T Consensus 238 ~lrnN~l~tL--~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~ 292 (1096)
T KOG1859|consen 238 NLRNNALTTL--RGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLC 292 (1096)
T ss_pred eecccHHHhh--hhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccc
Confidence 8888877754 456777888888888887775433 23456677788888888875
No 492
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.76 E-value=4.3e-08 Score=97.73 Aligned_cols=110 Identities=15% Similarity=0.092 Sum_probs=78.8
Q ss_pred HHHHHHHHHhcCCCC--ceeEEEEeeccccCCCCceEEEEEecCCCC-ChhhhccCCCCCcccccccCHHHHHHHHHHHH
Q 005045 431 SFIDECNALKSTRHR--NILRVITACSSVDLEGNDFKALVFEFMSNG-NLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVA 507 (717)
Q Consensus 431 ~~~~e~~~l~~l~h~--ni~~~~~~~~~~~~~~~~~~~lv~e~~~~~-~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~ 507 (717)
.+.+|+..+..+... ..+..++++...........++|||++++. +|.+++..... ...+......++.+++
T Consensus 74 ~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~LVte~l~~~~sL~~~~~~~~~-----~~~~~~~~~~ll~~la 148 (268)
T PRK15123 74 GADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFIITEDLAPTISLEDYCADWAT-----NPPDPRLKRMLIKRVA 148 (268)
T ss_pred HHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEEEEeeCCCCccHHHHHHhhcc-----cCCCHHHHHHHHHHHH
Confidence 467888888777322 233334443221111123578999999875 79888753211 3345667789999999
Q ss_pred HHHHHHHhcCCCCeeecCCCCCCEEeCC-------CCceEEeeeccch
Q 005045 508 SALDYLHHHCDTPIAHCDLKPSNVLLDK-------DMTAHVGDFGLAK 548 (717)
Q Consensus 508 ~~l~~LH~~~~~~ivH~dlkp~NIll~~-------~~~~kl~Dfg~~~ 548 (717)
..++-||.. |++|||++++||+++. ++.+.++||+.+.
T Consensus 149 ~~i~~LH~~---Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~ 193 (268)
T PRK15123 149 TMVRDMHAA---GINHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQ 193 (268)
T ss_pred HHHHHHHHC---cCccCCCChhhEEEeccccCCCCCceEEEEECCccc
Confidence 999999998 9999999999999975 4689999999775
No 493
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.72 E-value=1e-09 Score=92.78 Aligned_cols=138 Identities=22% Similarity=0.280 Sum_probs=85.3
Q ss_pred CCCEEEeecCcccCcCchhhhhcc--ccccEEecCCCccCCCCCcccc-CCCCCCEEEccCCcCccccchhhhcCCCCCe
Q 005045 234 SLEVLGLARNSFGGEMPISIANLS--THLRRLTMGENLMHGNIPVGIG-NLVNLNLLGLEGNNLSGSVPEVIGRLNKLEG 310 (717)
Q Consensus 234 ~L~~L~L~~N~l~~~~p~~~~~~~--~~L~~L~l~~N~l~~~~~~~~~-~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 310 (717)
.+..++|+++.+- .+++....+. ..|+..+|++|.+.. +|..|. ..+.++.|+|++|.|+ .+|..+..++.|+.
T Consensus 28 E~h~ldLssc~lm-~i~davy~l~~~~el~~i~ls~N~fk~-fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~ 104 (177)
T KOG4579|consen 28 ELHFLDLSSCQLM-YIADAVYMLSKGYELTKISLSDNGFKK-FPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRS 104 (177)
T ss_pred Hhhhcccccchhh-HHHHHHHHHhCCceEEEEecccchhhh-CCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhh
Confidence 3445555555554 4444444332 234555666666653 333333 3456777777777777 56777777788888
Q ss_pred EEcccCcCCCCCCcccccccccceeecccccccccCCcCccCcCCCceEEeecccCCCCCCccccc
Q 005045 311 LGLNVNKFSGLIPSSLGNLTILTRLWMEENRLEGSIPPSLGNCQKLLVLNLSSNDLNGTIPKEVRQ 376 (717)
Q Consensus 311 L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~ 376 (717)
|++++|++. ..|..+..+.+|-.|+..+|.+. .+|-.+-.-...-..++.+++|.+..|...+.
T Consensus 105 lNl~~N~l~-~~p~vi~~L~~l~~Lds~~na~~-eid~dl~~s~~~al~~lgnepl~~~~~~klqa 168 (177)
T KOG4579|consen 105 LNLRFNPLN-AEPRVIAPLIKLDMLDSPENARA-EIDVDLFYSSLPALIKLGNEPLGDETKKKLQA 168 (177)
T ss_pred cccccCccc-cchHHHHHHHhHHHhcCCCCccc-cCcHHHhccccHHHHHhcCCcccccCcccccc
Confidence 888888777 55666777777888887777776 55544332233334456788888877766543
No 494
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.71 E-value=1.7e-09 Score=91.59 Aligned_cols=142 Identities=20% Similarity=0.197 Sum_probs=105.4
Q ss_pred CCeeeccccccCCcccCchhhhhhhccCCCCCEEEeecCcccCcCchhhhhccccccEEecCCCccCCCCCccccCCCCC
Q 005045 205 LVRLNFDQNELGSREIGDLNFLKFLANCTSLEVLGLARNSFGGEMPISIANLSTHLRRLTMGENLMHGNIPVGIGNLVNL 284 (717)
Q Consensus 205 L~~L~l~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L 284 (717)
+..++|+++.+..+.. .+..+.....|+..+|++|.+. .+|..|...++.++.|++++|.|. .+|..+..++.|
T Consensus 29 ~h~ldLssc~lm~i~d----avy~l~~~~el~~i~ls~N~fk-~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aL 102 (177)
T KOG4579|consen 29 LHFLDLSSCQLMYIAD----AVYMLSKGYELTKISLSDNGFK-KFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPAL 102 (177)
T ss_pred hhhcccccchhhHHHH----HHHHHhCCceEEEEecccchhh-hCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHh
Confidence 4455666665554321 1445666777888899999998 888888777668899999999998 677779999999
Q ss_pred CEEEccCCcCccccchhhhcCCCCCeEEcccCcCCCCCCcccccccccceeecccccccccCCcCccCcC
Q 005045 285 NLLGLEGNNLSGSVPEVIGRLNKLEGLGLNVNKFSGLIPSSLGNLTILTRLWMEENRLEGSIPPSLGNCQ 354 (717)
Q Consensus 285 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 354 (717)
+.|+++.|.+. ..|..+..|.+|..|+..+|.+..+.-+ +-.-...-..++.++.+.+.-+..+..+.
T Consensus 103 r~lNl~~N~l~-~~p~vi~~L~~l~~Lds~~na~~eid~d-l~~s~~~al~~lgnepl~~~~~~klqa~k 170 (177)
T KOG4579|consen 103 RSLNLRFNPLN-AEPRVIAPLIKLDMLDSPENARAEIDVD-LFYSSLPALIKLGNEPLGDETKKKLQALK 170 (177)
T ss_pred hhcccccCccc-cchHHHHHHHhHHHhcCCCCccccCcHH-HhccccHHHHHhcCCcccccCcccccccC
Confidence 99999999999 7888888899999999999998855444 33334444556677778766665554443
No 495
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.70 E-value=2.3e-09 Score=102.46 Aligned_cols=85 Identities=24% Similarity=0.249 Sum_probs=44.3
Q ss_pred CCCEEEccCccccccCCc-cc-cCCCCCCEEeccCCcCcc--cCChhhhccCCCCeEeccCCCCCCCCCccccCCCCccE
Q 005045 59 KLEIIGLGGSNLTGNVPA-WI-GNFSSLKALSLAWNNLRG--SIPNELGQLSGLGFFTLYGNFISGIIPSSIYNISSIYY 134 (717)
Q Consensus 59 ~L~~L~L~~n~l~~~~p~-~~-~~l~~L~~L~L~~n~l~~--~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~ 134 (717)
-++.|.+.++.|...-.. .| ...+.++.|||.+|.|+. .+-..+.+++.|++|+|+.|++...+-..-..+.+|+.
T Consensus 46 a~ellvln~~~id~~gd~~~~~~~~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I~~lp~p~~nl~~ 125 (418)
T KOG2982|consen 46 ALELLVLNGSIIDNEGDVMLFGSSVTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDIKSLPLPLKNLRV 125 (418)
T ss_pred chhhheecCCCCCcchhHHHHHHHhhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCccccCcccccceEE
Confidence 444556666655421111 12 234556777777777762 22233456667777777777766222111134456666
Q ss_pred EEcccCccc
Q 005045 135 FSVTQNQLH 143 (717)
Q Consensus 135 L~L~~N~l~ 143 (717)
|-|.+..+.
T Consensus 126 lVLNgT~L~ 134 (418)
T KOG2982|consen 126 LVLNGTGLS 134 (418)
T ss_pred EEEcCCCCC
Confidence 666665553
No 496
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.67 E-value=4.5e-10 Score=119.30 Aligned_cols=198 Identities=24% Similarity=0.194 Sum_probs=111.1
Q ss_pred CCCCCEEEccCccccccC-CccccCCCCCCEEeccCCcCcccCChhhhccC-CCCeEeccCCCCCCCCCcc-------cc
Q 005045 57 LTKLEIIGLGGSNLTGNV-PAWIGNFSSLKALSLAWNNLRGSIPNELGQLS-GLGFFTLYGNFISGIIPSS-------IY 127 (717)
Q Consensus 57 l~~L~~L~L~~n~l~~~~-p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~-~L~~L~L~~N~i~~~~~~~-------~~ 127 (717)
+++++.|.+-.-.=.+.. |-.+..+.+|++|.|.++.|.. -..+..+. .|++|- .+|.+. .+... |+
T Consensus 83 lqkt~~lkl~~~pa~~pt~pi~ifpF~sLr~LElrg~~L~~--~~GL~~lr~qLe~LI-C~~Sl~-Al~~v~ascggd~~ 158 (1096)
T KOG1859|consen 83 LQKTKVLKLLPSPARDPTEPISIFPFRSLRVLELRGCDLST--AKGLQELRHQLEKLI-CHNSLD-ALRHVFASCGGDIS 158 (1096)
T ss_pred HhhheeeeecccCCCCCCCCceeccccceeeEEecCcchhh--hhhhHHHHHhhhhhh-hhccHH-HHHHHHHHhccccc
Confidence 344455554443332222 4556667778888888887763 12222222 344442 223222 01111 11
Q ss_pred C---CCCccEEEcccCcccccCCcccccCCCCcceeecccccccccCCccCCCCCCCCEEeccCccccccCCCCccCCCC
Q 005045 128 N---ISSIYYFSVTQNQLHGQLPTDVGLTLPNLKIFAGAVNYFTGSIPVSLSNASNLQVLDFAENGLTGTIPGNFGSLKD 204 (717)
Q Consensus 128 ~---l~~L~~L~L~~N~l~~~l~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~ 204 (717)
+ ...|...+.++|.+. .+...+- -++.|+.|+|++|+++.. +.+..+++|++|||++|.++ .+|..=..-.+
T Consensus 159 ns~~Wn~L~~a~fsyN~L~-~mD~SLq-ll~ale~LnLshNk~~~v--~~Lr~l~~LkhLDlsyN~L~-~vp~l~~~gc~ 233 (1096)
T KOG1859|consen 159 NSPVWNKLATASFSYNRLV-LMDESLQ-LLPALESLNLSHNKFTKV--DNLRRLPKLKHLDLSYNCLR-HVPQLSMVGCK 233 (1096)
T ss_pred cchhhhhHhhhhcchhhHH-hHHHHHH-HHHHhhhhccchhhhhhh--HHHHhcccccccccccchhc-cccccchhhhh
Confidence 1 125666777777775 4444432 567777777777777733 36777778888888888877 44442222233
Q ss_pred CCeeeccccccCCcccCchhhhhhhccCCCCCEEEeecCcccCcCchhhhhccccccEEecCCCccC
Q 005045 205 LVRLNFDQNELGSREIGDLNFLKFLANCTSLEVLGLARNSFGGEMPISIANLSTHLRRLTMGENLMH 271 (717)
Q Consensus 205 L~~L~l~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~L~~L~l~~N~l~ 271 (717)
|..|.+++|.++.+ ..+.++.+|+-||+++|-|.+.-.-.+......|+.|+|.+|.+-
T Consensus 234 L~~L~lrnN~l~tL--------~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~ 292 (1096)
T KOG1859|consen 234 LQLLNLRNNALTTL--------RGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLC 292 (1096)
T ss_pred heeeeecccHHHhh--------hhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccc
Confidence 77777777777763 356777777777777777764222222222236777777777664
No 497
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.65 E-value=3.2e-09 Score=101.56 Aligned_cols=109 Identities=20% Similarity=0.230 Sum_probs=76.4
Q ss_pred CCCEEECCCCcccccCC-cCC-CCCCCCCEEEccCccccc--cCCccccCCCCCCEEeccCCcCcccCChhhhccCCCCe
Q 005045 35 ELRSFEASVNDFVGQIP-NQL-SSLTKLEIIGLGGSNLTG--NVPAWIGNFSSLKALSLAWNNLRGSIPNELGQLSGLGF 110 (717)
Q Consensus 35 ~L~~L~L~~n~l~~~~p-~~~-~~l~~L~~L~L~~n~l~~--~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 110 (717)
.+..|-+.++.|-.+-. ..| ...+.++.|||.+|.|++ .+-..+.+++.|++|+|+.|.+...+-..-..+.+|++
T Consensus 46 a~ellvln~~~id~~gd~~~~~~~~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I~~lp~p~~nl~~ 125 (418)
T KOG2982|consen 46 ALELLVLNGSIIDNEGDVMLFGSSVTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDIKSLPLPLKNLRV 125 (418)
T ss_pred chhhheecCCCCCcchhHHHHHHHhhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCccccCcccccceEE
Confidence 44456666666542111 112 446789999999999983 22334578999999999999998443322257789999
Q ss_pred EeccCCCCCC-CCCccccCCCCccEEEcccCccc
Q 005045 111 FTLYGNFISG-IIPSSIYNISSIYYFSVTQNQLH 143 (717)
Q Consensus 111 L~L~~N~i~~-~~~~~~~~l~~L~~L~L~~N~l~ 143 (717)
|-|.+..+.- ..-..+..++.++.|++|.|.+.
T Consensus 126 lVLNgT~L~w~~~~s~l~~lP~vtelHmS~N~~r 159 (418)
T KOG2982|consen 126 LVLNGTGLSWTQSTSSLDDLPKVTELHMSDNSLR 159 (418)
T ss_pred EEEcCCCCChhhhhhhhhcchhhhhhhhccchhh
Confidence 9999998873 23345678889999999999664
No 498
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=98.65 E-value=4e-09 Score=99.59 Aligned_cols=87 Identities=22% Similarity=0.168 Sum_probs=46.1
Q ss_pred CCCCCEEEccCCcCccc----cchhhhcCCCCCeEEcccCcCCCCCCcccc------cccccceeecccccccccCCcC-
Q 005045 281 LVNLNLLGLEGNNLSGS----VPEVIGRLNKLEGLGLNVNKFSGLIPSSLG------NLTILTRLWMEENRLEGSIPPS- 349 (717)
Q Consensus 281 l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~------~l~~L~~L~L~~N~l~~~~p~~- 349 (717)
+.+|+.|||..|-++-. +..+++.++.|+.|.+.+|-++.....++- ..++|..|-+.+|...+.+-..
T Consensus 213 ~~~LevLDlqDNtft~~gS~~La~al~~W~~lrEL~lnDClls~~G~~~v~~~f~e~~~p~l~~L~~~Yne~~~~~i~~~ 292 (388)
T COG5238 213 SHSLEVLDLQDNTFTLEGSRYLADALCEWNLLRELRLNDCLLSNEGVKSVLRRFNEKFVPNLMPLPGDYNERRGGIILDI 292 (388)
T ss_pred hCcceeeeccccchhhhhHHHHHHHhcccchhhhccccchhhccccHHHHHHHhhhhcCCCccccccchhhhcCceeeee
Confidence 34555555555554421 223444555666666666666544332221 1356666666666654332221
Q ss_pred ----c--cCcCCCceEEeecccCC
Q 005045 350 ----L--GNCQKLLVLNLSSNDLN 367 (717)
Q Consensus 350 ----~--~~l~~L~~L~l~~N~l~ 367 (717)
+ .+++-|..|.+.||.|.
T Consensus 293 ~l~~~e~~~~p~L~~le~ngNr~~ 316 (388)
T COG5238 293 SLNEFEQDAVPLLVDLERNGNRIK 316 (388)
T ss_pred chhhhhhcccHHHHHHHHccCcch
Confidence 1 34667777777888776
No 499
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.60 E-value=1.6e-08 Score=108.33 Aligned_cols=101 Identities=18% Similarity=0.437 Sum_probs=75.4
Q ss_pred HHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCceEEeeeccchhcccccCCCCCC--cceeecccccccccCCCccCC
Q 005045 504 IDVASALDYLHHHCDTPIAHCDLKPSNVLLDKDMTAHVGDFGLAKFLFEISDNPSKN--QTVSIGLKGSIGYIPPEHMNG 581 (717)
Q Consensus 504 ~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~ 581 (717)
.+++.|+.|+|.. .++||++|.|++|.++..|.+||+.|+.+....+....+... .....-......|.|||++.+
T Consensus 106 ~~v~dgl~flh~s--Ak~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~ 183 (700)
T KOG2137|consen 106 GNVADGLAFLHRS--AKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLG 183 (700)
T ss_pred hcccchhhhhccC--cceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhcc
Confidence 3455999999987 699999999999999999999999999887654322211111 111112235568999999766
Q ss_pred C-CCcccchhhHHHHHHHHHhCCCCC
Q 005045 582 Q-VSILGDIYSYGILLLEMFTGKRPT 606 (717)
Q Consensus 582 ~-~~~~sDvwslG~vl~elltg~~p~ 606 (717)
. .+.++|+||+||.+|.+..|..+.
T Consensus 184 ~~~~~~sd~fSlG~li~~i~~~gk~i 209 (700)
T KOG2137|consen 184 TTNTPASDVFSLGVLIYTIYNGGKSI 209 (700)
T ss_pred ccccccccceeeeeEEEEEecCCcch
Confidence 4 689999999999999999655543
No 500
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=98.57 E-value=4.4e-07 Score=85.61 Aligned_cols=142 Identities=15% Similarity=0.163 Sum_probs=91.5
Q ss_pred cccccccccccCcccccceEEEEeCCCchhhhHHhHhhhhhHHHH---------HHHHHHHHhcC---CCCceeEEEEee
Q 005045 387 STDNFSKENLIGTGSFGSVYKGTLGDGTIVAIKVLKLQQQGALKS---------FIDECNALKST---RHRNILRVITAC 454 (717)
Q Consensus 387 ~~~~y~~~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~---------~~~e~~~l~~l---~h~ni~~~~~~~ 454 (717)
..++|.+.+.+.......|.+... +|+.+++|..........+. ..+.+....++ .-...+.++.+.
T Consensus 29 ~~~~~~~~kv~k~~~r~~ValIei-~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl~~ 107 (229)
T PF06176_consen 29 LDNNYKIIKVFKNTKRNYVALIEI-DGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYLAA 107 (229)
T ss_pred HhCCceEEEeecCCCccEEEEEEE-CCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccceeee
Confidence 356788888887777777766665 56778888876543222122 12233333333 333333333333
Q ss_pred ccccCCCCceEEEEEecCCCCChhhhccCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeC
Q 005045 455 SSVDLEGNDFKALVFEFMSNGNLDQWLHPSPAEHYQFKKLSVIQRLNIAIDVASALDYLHHHCDTPIAHCDLKPSNVLLD 534 (717)
Q Consensus 455 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~ 534 (717)
.-..+.-....+++|||++|..+.+... +++ .++..++.++.-+|+. |++|||.+|.|++++
T Consensus 108 ekk~~~~~~~~~ll~EYIeG~~l~d~~~-----------i~e----~~~~ki~~~ikqlH~~---G~~HGD~hpgNFlv~ 169 (229)
T PF06176_consen 108 EKKIFRYTSSYVLLMEYIEGVELNDIED-----------IDE----DLAEKIVEAIKQLHKH---GFYHGDPHPGNFLVS 169 (229)
T ss_pred eeeeccceeEEEEEEEEecCeecccchh-----------cCH----HHHHHHHHHHHHHHHc---CCccCCCCcCcEEEE
Confidence 3222333445679999999988866532 222 2556788889999998 999999999999998
Q ss_pred CCCceEEeeeccch
Q 005045 535 KDMTAHVGDFGLAK 548 (717)
Q Consensus 535 ~~~~~kl~Dfg~~~ 548 (717)
.+ .++++||+..+
T Consensus 170 ~~-~i~iID~~~k~ 182 (229)
T PF06176_consen 170 NN-GIRIIDTQGKR 182 (229)
T ss_pred CC-cEEEEECcccc
Confidence 55 49999998654
Done!