Query 005046
Match_columns 716
No_of_seqs 216 out of 429
Neff 4.2
Searched_HMMs 29240
Date Mon Mar 25 13:44:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005046.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/005046hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3t7a_A Inositol pyrophosphate 100.0 4E-124 1E-128 977.1 25.0 321 3-330 4-324 (330)
2 1i7n_A Synapsin II; synapse, p 100.0 7.2E-31 2.5E-35 275.0 14.7 220 55-314 67-303 (309)
3 2p0a_A Synapsin-3, synapsin II 100.0 2.4E-30 8.1E-35 274.8 14.3 221 56-316 85-322 (344)
4 1pk8_A RAT synapsin I; ATP bin 100.0 2.6E-29 8.8E-34 272.8 14.3 220 56-315 180-416 (422)
5 2q7d_A Inositol-tetrakisphosph 99.9 3.7E-27 1.3E-31 249.3 18.9 274 4-314 16-335 (346)
6 1z2n_X Inositol 1,3,4-trisphos 99.9 7.3E-22 2.5E-26 201.1 16.9 254 1-299 6-308 (324)
7 1uc8_A LYSX, lysine biosynthes 99.9 2.1E-21 7.3E-26 191.3 18.2 237 21-289 11-253 (280)
8 3ln6_A Glutathione biosynthesi 99.8 5.7E-20 2E-24 211.9 7.6 184 83-293 471-725 (750)
9 3ln7_A Glutathione biosynthesi 99.8 7.6E-20 2.6E-24 211.1 7.2 180 86-292 479-730 (757)
10 1gsa_A Glutathione synthetase; 99.8 3.4E-19 1.2E-23 178.2 6.3 198 53-289 76-285 (316)
11 3r5x_A D-alanine--D-alanine li 99.7 1.5E-18 5E-23 175.5 9.3 253 23-310 24-299 (307)
12 1iow_A DD-ligase, DDLB, D-ALA\ 99.7 3E-17 1E-21 164.5 13.5 234 24-289 24-274 (306)
13 4eg0_A D-alanine--D-alanine li 99.7 3.8E-16 1.3E-20 160.0 13.6 239 22-292 33-286 (317)
14 2fb9_A D-alanine:D-alanine lig 99.6 3.9E-15 1.3E-19 153.8 12.4 199 55-289 75-289 (322)
15 3se7_A VANA; alpha-beta struct 99.6 4.3E-14 1.5E-18 147.2 18.7 199 56-289 90-309 (346)
16 2pvp_A D-alanine-D-alanine lig 99.6 1.5E-14 5E-19 153.4 14.0 223 56-312 107-346 (367)
17 1e4e_A Vancomycin/teicoplanin 99.6 1.8E-14 6E-19 149.4 14.0 202 55-289 89-309 (343)
18 1ehi_A LMDDL2, D-alanine:D-lac 99.6 1.1E-14 3.8E-19 153.9 12.2 207 54-288 91-319 (377)
19 2i87_A D-alanine-D-alanine lig 99.5 9E-15 3.1E-19 153.0 9.8 209 55-289 86-310 (364)
20 3df7_A Putative ATP-grAsp supe 99.5 6.1E-14 2.1E-18 144.7 12.2 174 54-288 67-247 (305)
21 3i12_A D-alanine-D-alanine lig 99.5 7.2E-13 2.5E-17 139.5 17.5 229 55-312 97-353 (364)
22 3e5n_A D-alanine-D-alanine lig 99.5 4.5E-13 1.5E-17 142.9 16.0 229 55-312 116-372 (386)
23 3k3p_A D-alanine--D-alanine li 99.5 8.5E-14 2.9E-18 148.8 10.2 262 21-312 56-374 (383)
24 3lwb_A D-alanine--D-alanine li 99.4 8E-13 2.7E-17 140.3 14.6 206 56-290 109-335 (373)
25 2pn1_A Carbamoylphosphate synt 99.4 3.7E-13 1.3E-17 137.1 11.0 191 56-288 72-270 (331)
26 3tqt_A D-alanine--D-alanine li 99.4 6.3E-13 2.2E-17 141.4 13.2 205 55-287 97-318 (372)
27 2z04_A Phosphoribosylaminoimid 99.4 2.2E-12 7.4E-17 134.0 16.8 192 56-289 57-254 (365)
28 1kjq_A GART 2, phosphoribosylg 99.4 2.1E-13 7.3E-18 142.2 8.1 196 56-288 74-281 (391)
29 2dwc_A PH0318, 433AA long hypo 99.4 4.7E-13 1.6E-17 142.5 10.5 194 56-289 82-295 (433)
30 2ip4_A PURD, phosphoribosylami 99.4 2.5E-13 8.5E-18 143.9 8.3 200 56-288 61-280 (417)
31 3aw8_A PURK, phosphoribosylami 99.4 4.8E-13 1.6E-17 139.3 9.6 195 56-289 59-262 (369)
32 3ax6_A Phosphoribosylaminoimid 99.4 2E-12 6.8E-17 135.2 14.1 188 56-289 62-261 (380)
33 4dim_A Phosphoribosylglycinami 99.4 4.3E-13 1.5E-17 140.8 8.3 197 56-289 71-279 (403)
34 4fu0_A D-alanine--D-alanine li 99.4 4.1E-13 1.4E-17 140.8 7.8 201 56-289 97-316 (357)
35 1vkz_A Phosphoribosylamine--gl 99.4 7.2E-13 2.5E-17 141.1 8.1 238 21-288 25-288 (412)
36 2yw2_A Phosphoribosylamine--gl 99.3 7.7E-13 2.6E-17 140.2 7.0 207 56-289 62-287 (424)
37 3vot_A L-amino acid ligase, BL 99.3 1.6E-11 5.6E-16 130.3 16.2 204 57-288 76-289 (425)
38 2yrx_A Phosphoribosylglycinami 99.3 8.5E-13 2.9E-17 141.9 5.9 206 56-288 83-307 (451)
39 3q2o_A Phosphoribosylaminoimid 99.3 1.8E-11 6.1E-16 129.0 15.1 235 8-290 16-279 (389)
40 2xcl_A Phosphoribosylamine--gl 99.3 5.8E-13 2E-17 141.1 3.6 207 56-289 62-287 (422)
41 4ffl_A PYLC; amino acid, biosy 99.3 1.7E-11 5.7E-16 127.4 13.7 176 56-288 63-242 (363)
42 2qk4_A Trifunctional purine bi 99.3 1.3E-12 4.3E-17 140.3 4.8 206 57-289 89-314 (452)
43 3lp8_A Phosphoribosylamine-gly 99.3 4.7E-12 1.6E-16 137.0 8.4 206 57-289 84-308 (442)
44 4e4t_A Phosphoribosylaminoimid 99.2 6.3E-11 2.2E-15 127.5 15.6 190 56-290 96-304 (419)
45 3k5i_A Phosphoribosyl-aminoimi 99.2 4.9E-11 1.7E-15 127.4 14.5 185 71-290 99-292 (403)
46 3mjf_A Phosphoribosylamine--gl 99.2 7.3E-12 2.5E-16 135.0 7.7 206 57-289 68-293 (431)
47 3orq_A N5-carboxyaminoimidazol 99.2 1.1E-10 3.8E-15 123.2 16.6 191 56-290 73-275 (377)
48 3eth_A Phosphoribosylaminoimid 99.2 8.6E-11 2.9E-15 124.7 15.4 189 56-289 42-242 (355)
49 2w70_A Biotin carboxylase; lig 99.2 6.7E-12 2.3E-16 134.2 7.0 198 56-289 74-292 (449)
50 2r85_A PURP protein PF1517; AT 99.2 1.2E-11 4E-16 125.4 7.7 190 57-288 63-286 (334)
51 3ouz_A Biotin carboxylase; str 99.2 1.6E-11 5.4E-16 131.6 8.4 198 56-289 78-296 (446)
52 1ulz_A Pyruvate carboxylase N- 99.2 1.5E-11 5.1E-16 131.6 7.9 197 56-289 73-291 (451)
53 2vpq_A Acetyl-COA carboxylase; 99.2 2.8E-11 9.7E-16 129.4 7.6 201 55-290 72-293 (451)
54 2dzd_A Pyruvate carboxylase; b 99.1 1.8E-11 6.2E-16 131.5 5.0 198 56-290 79-297 (461)
55 3n6r_A Propionyl-COA carboxyla 99.1 1.8E-10 6E-15 131.9 12.5 200 56-290 74-293 (681)
56 3vmm_A Alanine-anticapsin liga 99.1 3.2E-10 1.1E-14 124.3 11.6 206 56-288 102-329 (474)
57 1a9x_A Carbamoyl phosphate syn 99.0 4.1E-10 1.4E-14 134.4 10.5 196 56-288 82-302 (1073)
58 3glk_A Acetyl-COA carboxylase 99.0 7.1E-11 2.4E-15 131.9 3.0 211 56-289 123-364 (540)
59 3u9t_A MCC alpha, methylcroton 99.0 1.6E-10 5.6E-15 132.0 5.9 202 56-290 100-319 (675)
60 3jrx_A Acetyl-COA carboxylase 99.0 1.3E-10 4.5E-15 131.2 4.6 212 56-290 139-381 (587)
61 2qf7_A Pyruvate carboxylase pr 99.0 1.6E-09 5.5E-14 130.6 13.4 200 56-289 93-312 (1165)
62 1a9x_A Carbamoyl phosphate syn 99.0 1.8E-09 6.2E-14 128.9 12.6 199 56-288 634-844 (1073)
63 1w96_A ACC, acetyl-coenzyme A 98.9 1.9E-10 6.5E-15 127.7 2.3 207 56-288 130-370 (554)
64 3va7_A KLLA0E08119P; carboxyla 98.9 2.6E-09 9E-14 129.4 12.1 200 56-288 103-320 (1236)
65 3hbl_A Pyruvate carboxylase; T 98.9 1.8E-09 6.3E-14 130.0 10.3 198 56-289 77-294 (1150)
66 2pbz_A Hypothetical protein; N 98.5 5.3E-07 1.8E-11 95.0 12.9 170 78-288 80-267 (320)
67 2r7k_A 5-formaminoimidazole-4- 98.1 4.8E-06 1.7E-10 88.8 9.0 178 79-288 107-313 (361)
68 1nd6_A Prostatic acid phosphat 98.1 7.1E-06 2.4E-10 84.7 9.1 54 478-547 36-96 (354)
69 1dkq_A Phytase; histidine acid 98.0 1.2E-05 4.1E-10 86.2 8.4 55 477-545 44-107 (410)
70 2wnh_A 3-phytase; histidine ac 97.7 4.9E-05 1.7E-09 81.7 7.2 57 477-547 53-117 (418)
71 2cqy_A Propionyl-COA carboxyla 97.6 1.1E-07 3.8E-12 81.7 -12.0 103 92-217 4-108 (108)
72 1wr2_A Hypothetical protein PH 97.4 8.5E-06 2.9E-10 80.9 -3.5 101 94-219 19-130 (238)
73 2gfi_A Phytase; hydrolase; HET 95.8 0.011 3.8E-07 64.3 6.5 57 484-558 139-195 (458)
74 3it3_A Acid phosphatase; HAP, 95.7 0.0077 2.6E-07 63.3 5.0 58 478-548 38-102 (342)
75 1qfx_A Protein (PH 2.5 acid ph 95.3 0.0098 3.4E-07 64.9 4.2 52 477-546 111-172 (460)
76 1qwo_A Phytase; alpha barrel, 95.3 0.015 5.3E-07 62.6 5.6 62 477-557 101-175 (442)
77 2io8_A Bifunctional glutathion 95.1 0.12 4.1E-06 59.2 12.2 114 75-228 477-600 (619)
78 3k4q_A 3-phytase A; PHYA, 3-ph 94.7 0.032 1.1E-06 61.0 5.9 52 477-547 102-159 (444)
79 3ntl_A Acid glucose-1-phosphat 94.5 0.019 6.6E-07 62.1 3.6 57 477-547 44-109 (398)
80 2nu8_B SCS-beta, succinyl-COA 92.1 0.2 6.7E-06 54.1 6.6 45 97-154 5-50 (388)
81 3it3_A Acid phosphatase; HAP, 90.5 0.12 3.9E-06 54.4 2.7 55 353-418 5-59 (342)
82 3ufx_B Succinyl-COA synthetase 90.5 0.038 1.3E-06 59.8 -0.9 44 98-154 6-49 (397)
83 2fp4_B Succinyl-COA ligase [GD 87.1 0.12 4.2E-06 55.9 0.1 42 98-152 6-48 (395)
84 3tig_A TTL protein; ATP-grAsp, 84.3 0.2 6.9E-06 54.3 0.1 56 144-217 147-210 (380)
85 3ntl_A Acid glucose-1-phosphat 83.2 0.49 1.7E-05 51.1 2.6 19 353-371 4-22 (398)
86 3n6x_A Putative glutathionylsp 78.1 0.68 2.3E-05 51.6 1.5 51 194-244 399-466 (474)
87 2vob_A Trypanothione synthetas 67.2 6 0.00021 45.7 5.9 67 145-228 543-615 (652)
88 2gfi_A Phytase; hydrolase; HET 65.6 2.6 8.8E-05 45.8 2.4 22 352-373 57-78 (458)
89 1qwo_A Phytase; alpha barrel, 65.1 2.7 9.4E-05 45.1 2.5 21 352-372 45-65 (442)
90 1qfx_A Protein (PH 2.5 acid ph 60.3 3.7 0.00013 44.7 2.4 21 352-372 50-70 (460)
91 1ujc_A Phosphohistidine phosph 56.0 6.2 0.00021 36.4 2.8 21 522-542 47-67 (161)
92 2rfl_A Putative phosphohistidi 55.5 6.8 0.00023 36.5 3.0 21 522-542 57-77 (173)
93 3mxo_A Serine/threonine-protei 48.3 8.3 0.00028 36.6 2.4 21 522-542 57-77 (202)
94 3hjg_A Putative alpha-ribazole 46.8 10 0.00036 36.5 2.9 21 522-542 51-71 (213)
95 1qhf_A Protein (phosphoglycera 46.5 11 0.00037 36.7 2.9 21 522-542 51-71 (240)
96 1fzt_A Phosphoglycerate mutase 46.5 10 0.00036 36.1 2.8 21 522-542 58-78 (211)
97 3kkk_A Phosphoglycerate mutase 46.3 11 0.00038 36.9 3.0 21 522-542 62-82 (258)
98 3gp3_A 2,3-bisphosphoglycerate 46.0 11 0.00039 36.9 3.0 21 522-542 60-80 (257)
99 3eoz_A Putative phosphoglycera 45.1 9.8 0.00034 36.7 2.4 21 522-542 71-91 (214)
100 3c7t_A Ecdysteroid-phosphate p 42.4 14 0.00047 36.5 3.0 21 522-542 84-104 (263)
101 1e58_A Phosphoglycerate mutase 42.3 14 0.00048 36.1 3.0 21 522-542 53-73 (249)
102 3mbk_A Ubiquitin-associated an 42.1 14 0.00048 36.5 3.0 21 522-542 82-102 (264)
103 3r7a_A Phosphoglycerate mutase 41.8 14 0.00048 35.7 2.9 21 522-542 62-82 (237)
104 3e9c_A ZGC:56074; histidine ph 41.3 13 0.00044 37.0 2.6 21 522-542 53-73 (265)
105 3d4i_A STS-2 protein; PGM, 2H- 41.2 15 0.0005 36.4 3.0 21 522-542 91-111 (273)
106 1yfk_A Phosphoglycerate mutase 40.8 14 0.0005 36.5 2.9 21 522-542 54-74 (262)
107 1h2e_A Phosphatase, YHFR; hydr 40.7 13 0.00043 35.6 2.4 21 522-542 50-70 (207)
108 3d8h_A Glycolytic phosphoglyce 40.3 15 0.00053 36.5 3.0 21 522-542 71-91 (267)
109 2qni_A AGR_C_517P, uncharacter 40.2 11 0.00039 36.7 2.0 21 522-542 67-87 (219)
110 2hhj_A Bisphosphoglycerate mut 39.3 16 0.00056 36.3 3.0 21 522-542 54-74 (267)
111 4eo9_A 2,3-bisphosphoglycerate 38.5 17 0.00057 36.3 2.9 21 522-542 78-98 (268)
112 4emb_A 2,3-bisphosphoglycerate 37.9 17 0.00059 36.2 2.9 21 522-542 78-98 (274)
113 3f2i_A ALR0221 protein; alpha- 36.5 18 0.00063 34.2 2.8 20 522-541 49-68 (172)
114 3dcy_A Regulator protein; OMIM 33.0 19 0.00066 35.9 2.4 21 522-542 58-78 (275)
115 1rii_A 2,3-bisphosphoglycerate 30.8 26 0.00089 35.1 2.9 21 522-542 55-75 (265)
116 3f3k_A Uncharacterized protein 29.6 21 0.0007 35.4 1.9 21 522-542 61-81 (265)
No 1
>3t7a_A Inositol pyrophosphate kinase; ATP-grAsp fold, transferase; HET: ADP; 1.70A {Homo sapiens} PDB: 3t9a_A* 3t9b_A* 3t9c_A* 3t9d_A* 3t9e_A* 3t9f_A* 4gb4_A* 4hn2_A* 3t54_A* 3t99_A*
Probab=100.00 E-value=4.1e-124 Score=977.06 Aligned_cols=321 Identities=57% Similarity=1.058 Sum_probs=311.5
Q ss_pred CCCeeEEEEeecCCccCChhHHHHHHHhhcCCceEEEEeCcceeecCCCcccCCcCeeeccccCCCcHHHHHHHHHhcCC
Q 005046 3 VHKKITIGVCVMEKKVFSAPMGQILDRLQAFGEFEVIHFGDKVILEDPIEKWPICDCLIAFYSSGYPLEKAESYATLRKP 82 (716)
Q Consensus 3 ~~~~i~iGVCaM~~Ka~SkPm~~IL~rL~~~g~feiiiF~d~vIL~e~ve~wP~~D~lIsf~s~gfpl~kai~y~~lr~p 82 (716)
..++|+|||||||+||+|||||+||+||.++++||||||+|+||||+|||+||.|||||||||+||||+|||+|+++|+|
T Consensus 4 ~~~~~~~gvcam~~k~~s~pm~~il~rl~~~~~f~~iif~d~~il~~~ve~wp~~d~lisf~s~gfpl~kai~y~~lr~p 83 (330)
T 3t7a_A 4 TERQIVVGICSMAKKSKSKPMKEILERISLFKYITVVVFEEEVILNEPVENWPLCDCLISFHSKGFPLDKAVAYAKLRNP 83 (330)
T ss_dssp --CCEEEEEESCHHHHTSHHHHHHHHHHTTSTTEEEEECCHHHHHHSCGGGSCCCSEEEECCCTTCCHHHHHHHHHHHCC
T ss_pred CCCceEEEEEecccccccHHHHHHHHHhcccCcEEEEEeCCCceecCCcccCCcCCEEEEeccCCCcHHHHHHHHHHhCC
Confidence 35799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCchhhhHhhhHHHHHHHHHhCCCCCCcEEEEecCCCccccccccCccceeeecCeeecCcEEEeeccccCcceeEE
Q 005046 83 FLVNELEPQHLLHDRRKVYEQLEKYGIPVPRYALVNREVPYQELDYFIEEEDFVEVHGNRFWKPFVEKPVHGDDHSIMIY 162 (716)
Q Consensus 83 ~~iNdl~~q~~l~DR~~~lqiL~~~gIP~P~t~~~~r~~~~~~~~~~~e~~d~I~v~G~~~~kPfVeKpv~GedHni~IY 162 (716)
|+|||+.+|.++|||+++|++|+++|||||+|++++|+++++....+++.+|+|+++|+++++|||+||++|||||||||
T Consensus 84 ~~INd~~~q~~~~DK~~~~~iL~~~gIPtP~t~~~~rd~~~~~~~~~~e~~d~i~~~g~~l~kPfVeKPv~Gsdhni~iy 163 (330)
T 3t7a_A 84 FVINDLNMQYLIQDRREVYSILQAEGILLPRYAILNRDPNNPKECNLIEGEDHVEVNGEVFQKPFVEKPVSAEDHNVYIY 163 (330)
T ss_dssp EESBCSTHHHHHTBHHHHHHHHHHTTCCCCCEEEECCBTTBGGGSSEEECSSEEEETTEEEESSEEEEESBTTCCCCEEE
T ss_pred ceeCCHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEeCCCCCccccceeccchhhhhccccccCCeeEcccccccCcceee
Confidence 99999999999999999999999999999999999999877666789999999999999999999999999999999999
Q ss_pred eccCCCChHHHHHhhhCCCcccccccccccccCcceEEeeccCCCCceeEEEEECCceeEEEeecCCCCCCceeecCCCC
Q 005046 163 YPSSAGGGMKELFRKVGNRSSEFHPDVRRVRREGSYIYEEFMPTGGTDVKVYTVGPEYAHAEARKSPVVDGVVMRNPDGK 242 (716)
Q Consensus 163 yp~~~GgG~~rLfrkign~sS~~~p~~~~~r~~gsyIyQEFi~~~G~DIKvytVG~~~vhAe~RKSPv~DG~vrrN~~gk 242 (716)
||++|||||+|||||++|+||+|+|++ .+|++++|||||||+++|+||||||||++|||||+|+||++||+||||+|||
T Consensus 164 yp~s~GgG~~RLfrki~n~sS~~~~~~-~vr~~~~~i~QEFI~~~G~DIRv~vVG~~vv~Am~R~sp~~~G~~r~N~~gG 242 (330)
T 3t7a_A 164 YPTSAGGGSQRLFRKIGSRSSVYSPES-NVRKTGSYIYEEFMPTDGTDVKVYTVGPDYAHAEARKSPALDGKVERDSEGK 242 (330)
T ss_dssp CCGGGTCCEEEEEEEETTEEEEEESCC-SCCSSSCEEEEECCCCSSEEEEEEEESTTCEEEEEEECTTSSCBCCBCTTSC
T ss_pred cccccCCchhhhhhhhCCcccccChhh-hhccCCcEEEEeccCCCCceEEEEEECCEEEEEEEEeCCCCCCcEEEcCCCC
Confidence 999999999999999999999999987 6799999999999999999999999999999999999999999999999999
Q ss_pred ceeeeeeCCHHHHHHHHHHHHHhcCceeeEeEEeeCCCcEEEeccCccccccchhhHHHHHHHHHHHHHHhhCCCCCCCC
Q 005046 243 EVRYPVLLTPNEKQMAREVCIAFRQAVCGFDLLRCEGRSYVCDVNGWSFVKNSYKYYDDAACVLRKMFLEAKAPHLSSAI 322 (716)
Q Consensus 243 e~r~pv~Lt~eEk~iA~ka~kafgq~VcGfDLLRs~g~syV~DVNgwSFVK~n~kYYddcA~IL~~~~l~~~~~~~~~~~ 322 (716)
|+|++|+||+||++||+|||+||||+||||||||++++|||||||||||||+|.+|||+||+||+.+|+++++|++
T Consensus 243 ~~~~~v~Lt~eek~iA~kaa~a~G~~v~GVDlLrs~~~~~V~EVNg~~fvk~~~~yyd~~a~il~~~~~~~~~~~~---- 318 (330)
T 3t7a_A 243 EVRYPVILNAREKLIAWKVCLAFKQTVCGFDLLRANGQSYVCDVNGFSFVKNSMKYYDDCAKILGNIVMRELAPQF---- 318 (330)
T ss_dssp BCCEECCCCHHHHHHHHHHHHHTTBSEEEEEEEEETTEEEEEEEEESCCCSSCHHHHHHHHHHHHHHHHHHHHHHH----
T ss_pred ceeeeecCCHHHHHHHHHHHHHhCCceEEEEEEEECCccEEEEeCCCccccCchhHHHHHHHHHHHHHHHHhCccc----
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred CCCCCCCC
Q 005046 323 PPILPWKV 330 (716)
Q Consensus 323 ~~~lp~~~ 330 (716)
++||+.
T Consensus 319 --~~~~~~ 324 (330)
T 3t7a_A 319 --HIPWSI 324 (330)
T ss_dssp --TCCCCC
T ss_pred --CCcccC
Confidence 466654
No 2
>1i7n_A Synapsin II; synapse, phosphorylation, neuropeptide; 1.90A {Rattus norvegicus} SCOP: c.30.1.5 d.142.1.3 PDB: 1i7l_A 1auv_A 1aux_A*
Probab=99.97 E-value=7.2e-31 Score=275.02 Aligned_cols=220 Identities=14% Similarity=0.126 Sum_probs=172.1
Q ss_pred CCcCeeeccccCCC-----cHHHHHHHHHhcCCcccCCchhhhHhhhH----HHHHHHHHhCCC---CCCcEEEEecCCC
Q 005046 55 PICDCLIAFYSSGY-----PLEKAESYATLRKPFLVNELEPQHLLHDR----RKVYEQLEKYGI---PVPRYALVNREVP 122 (716)
Q Consensus 55 P~~D~lIsf~s~gf-----pl~kai~y~~lr~p~~iNdl~~q~~l~DR----~~~lqiL~~~gI---P~P~t~~~~r~~~ 122 (716)
+..|++|.+-.+.. ....++++++.+|.+++|++.+...++|| ..++++|++.|+ |+|.+.+.. +
T Consensus 67 ~~~D~vi~R~~~~~~~~~~~~r~vl~~le~~GvpviN~~~sI~~~~DK~~~~~~~~~~l~~~gi~~~P~~~~~~~~-~-- 143 (309)
T 1i7n_A 67 FRPDFVLIRQHAFGMAENEDFRHLVIGMQYAGLPSINSLESIYNFCDKPWVFAQMVAIFKTLGGEKFPLIEQTYYP-N-- 143 (309)
T ss_dssp ECCSEEEECSCCCCSSTTCCCHHHHHHHHHTTCCEESCHHHHHHTSSHHHHHHHHHHHHHHHCTTTSCBCCCEEES-S--
T ss_pred ccCCEEEEecccccccccchHHHHHHHHHHCCccccCCHHHHHHhCCccHHHHHHHHHHHhCCCCCCCCCCEEeeC-C--
Confidence 46799998887665 22577889999999999999999999999 789999999999 854544442 1
Q ss_pred ccccccccCccceeeecCeeecCcEEEeeccccCcceeEEeccCCCChHHHHHhhhCCCcccccccccccc-cCcceEEe
Q 005046 123 YQELDYFIEEEDFVEVHGNRFWKPFVEKPVHGDDHSIMIYYPSSAGGGMKELFRKVGNRSSEFHPDVRRVR-REGSYIYE 201 (716)
Q Consensus 123 ~~~~~~~~e~~d~I~v~G~~~~kPfVeKpv~GedHni~IYyp~~~GgG~~rLfrkign~sS~~~p~~~~~r-~~gsyIyQ 201 (716)
..+.++. ++.|+|+||++|+ +|-|+. |++......+..+ .++ .+..++.|
T Consensus 144 ---------~~~~~~~----~g~PvVvK~~~Gs-----------~G~GV~-lv~~~~~~~~~~~----~~~~~~~~~~vQ 194 (309)
T 1i7n_A 144 ---------HREMLTL----PTFPVVVKIGHAH-----------SGMGKV-KVENHYDFQDIAS----VVALTQTYATAE 194 (309)
T ss_dssp ---------GGGGSSC----CCSSEEEEESSCS-----------TTTTEE-EECSHHHHHHHHH----HHHHHTCCEEEE
T ss_pred ---------hhhhhhc----cCCCEEEEeCCCC-----------ceeCeE-EECCHHHHHHHHH----HHhccCCeEEEE
Confidence 1223332 3589999999999 999986 6655543333332 333 34566789
Q ss_pred eccCCCCceeEEEEECCceeEEEeecCCCCCCceeecCCCCceeeeeeCCHHHHHHHHHHHHHh-cCceeeEeEEeeCCC
Q 005046 202 EFMPTGGTDVKVYTVGPEYAHAEARKSPVVDGVVMRNPDGKEVRYPVLLTPNEKQMAREVCIAF-RQAVCGFDLLRCEGR 280 (716)
Q Consensus 202 EFi~~~G~DIKvytVG~~~vhAe~RKSPv~DG~vrrN~~gke~r~pv~Lt~eEk~iA~ka~kaf-gq~VcGfDLLRs~g~ 280 (716)
|||+ .|.||||+|||++++ |+.|+|+ .|.|++|.+ ++...++.||++++++|.+++++| |+.+||||||++++|
T Consensus 195 efI~-~g~DiRv~VvGg~v~-a~~Rr~~--~g~wrtN~~-~~~~e~~~l~~e~~~la~~A~~a~gGldi~GVDll~~~~g 269 (309)
T 1i7n_A 195 PFID-AKYDIRVQKIGNNYK-AYMRTSI--SGNWKTNTG-SAMLEQIAMSDRYKLWVDACSEMFGGLDICAVKAVHGKDG 269 (309)
T ss_dssp ECCC-EEEEEEEEEETTEEE-EEEEESS--CTTTSCSCC-CSSEEEECCCHHHHHHHHHHTTGGGCCSEEEEEEEEETTS
T ss_pred eecC-CCceEEEEEECCEEE-EEEEEcC--CCCCeecCC-cceeeecCCCHHHHHHHHHHHHHhCCCCEEEEEEEEcCCC
Confidence 9999 699999999999987 6777786 899999996 577789999999999999999999 799999999999877
Q ss_pred -cEEEeccC--ccccccchhhHHHHHHHHHHHHHHhh
Q 005046 281 -SYVCDVNG--WSFVKNSYKYYDDAACVLRKMFLEAK 314 (716)
Q Consensus 281 -syV~DVNg--wSFVK~n~kYYddcA~IL~~~~l~~~ 314 (716)
+||||||+ .++.++... +.+.-+...++..+
T Consensus 270 ~~~V~EVN~~~~P~~~~~~~---~~~~~ia~~ii~~~ 303 (309)
T 1i7n_A 270 KDYIFEVMDCSMPLIGEHQV---EDRQLITDLVISKM 303 (309)
T ss_dssp CEEEEEEECTTCCCCSSCHH---HHHHHHHHHHHHHH
T ss_pred CEEEEEECCCCCCCccchhh---hhHHHHHHHHHHHH
Confidence 58999999 999986653 44444444444443
No 3
>2p0a_A Synapsin-3, synapsin III; neurotransmitter release, schizophrenia, vesicle T structural genomics, structural genomics consortium, SGC, neuropeptide; HET: ANP; 1.90A {Homo sapiens}
Probab=99.97 E-value=2.4e-30 Score=274.80 Aligned_cols=221 Identities=14% Similarity=0.145 Sum_probs=172.1
Q ss_pred CcCeeeccccCCC-----cHHHHHHHHHhcCCcccCCchhhhHhhhH----HHHHHHHHhCCC---CCCcEEEEecCCCc
Q 005046 56 ICDCLIAFYSSGY-----PLEKAESYATLRKPFLVNELEPQHLLHDR----RKVYEQLEKYGI---PVPRYALVNREVPY 123 (716)
Q Consensus 56 ~~D~lIsf~s~gf-----pl~kai~y~~lr~p~~iNdl~~q~~l~DR----~~~lqiL~~~gI---P~P~t~~~~r~~~~ 123 (716)
..|++|.+-.+.. ....++++++.+|.+++|++.++..++|| ..++++|.+.|+ |+|.+.+.. +
T Consensus 85 ~~D~vi~R~~~~~~~~~~~yr~vl~~le~~GvpviN~~~sI~~~~DK~~v~~~~l~~l~~~gi~~~P~~~~t~~~-~--- 160 (344)
T 2p0a_A 85 KPDFILVRQHAYSMALGEDYRSLVIGLQYGGLPAVNSLYSVYNFCSKPWVFSQLIKIFHSLGPEKFPLVEQTFFP-N--- 160 (344)
T ss_dssp CCSEEEECSCSEEGGGTEECHHHHHHHHHTTCCEESCHHHHHHTTCHHHHHHHHHHHHHHHCTTTSCBCCCEEES-S---
T ss_pred CCCEEEEeccccccccchhHHHHHHHHHHCCceecCCHHHHHhhCCchHHHHHHHHHHHHCCCCCCCCCCEEecC-c---
Confidence 6799999987743 12477889999999999999999999999 889999999999 854544442 1
Q ss_pred cccccccCccceeeecCeeecCcEEEeeccccCcceeEEeccCCCChHHHHHhhhCCCcccccccccccc-cCcceEEee
Q 005046 124 QELDYFIEEEDFVEVHGNRFWKPFVEKPVHGDDHSIMIYYPSSAGGGMKELFRKVGNRSSEFHPDVRRVR-REGSYIYEE 202 (716)
Q Consensus 124 ~~~~~~~e~~d~I~v~G~~~~kPfVeKpv~GedHni~IYyp~~~GgG~~rLfrkign~sS~~~p~~~~~r-~~gsyIyQE 202 (716)
..+.+.. ++.|+|+||++|+ +|-|+. |++......+..+ .++ .+..++.||
T Consensus 161 --------~~~~~~~----~g~PvVvK~~~Gs-----------~G~GV~-lve~~~~~~~~~~----~~~~~~~~~~vQe 212 (344)
T 2p0a_A 161 --------HKPMVTA----PHFPVVVKLGHAH-----------AGMGKI-KVENQLDFQDITS----VVAMAKTYATTEA 212 (344)
T ss_dssp --------STTCCCC----SSSSEEEEESSCC-----------TTTTEE-EECSHHHHHHHHH----HHHHHTCCEEEEE
T ss_pred --------hhhhhhc----cCCCEEEEeCCCC-----------ceeCeE-EECCHHHHHHHHH----HHhccCCeEEEEe
Confidence 1233432 3489999999999 999986 6655543333332 222 345567899
Q ss_pred ccCCCCceeEEEEECCceeEEEeecCCCCCCceeecCCCCceeeeeeCCHHHHHHHHHHHHHh-cCceeeEeEEeeCCCc
Q 005046 203 FMPTGGTDVKVYTVGPEYAHAEARKSPVVDGVVMRNPDGKEVRYPVLLTPNEKQMAREVCIAF-RQAVCGFDLLRCEGRS 281 (716)
Q Consensus 203 Fi~~~G~DIKvytVG~~~vhAe~RKSPv~DG~vrrN~~gke~r~pv~Lt~eEk~iA~ka~kaf-gq~VcGfDLLRs~g~s 281 (716)
||+ .|.||||||||++++ |+.|+++ .|.|++|.+ ++...++.||++++++|.+++++| |+.+||||||++++|+
T Consensus 213 fI~-~g~DiRv~VVGg~vv-a~~R~~~--~g~wrtN~~-~~~~e~~~l~~e~~~la~~Aa~a~gGldi~GVDll~~~~G~ 287 (344)
T 2p0a_A 213 FID-SKYDIRIQKIGSNYK-AYMRTSI--SGNWKANTG-SAMLEQVAMTERYRLWVDSCSEMFGGLDICAVKAVHSKDGR 287 (344)
T ss_dssp CCC-EEEEEEEEEETTEEE-EEEEEES--SSCSSTTSS-SEEEEEECCCHHHHHHHHHHTTGGGCCSEEEEEEEEETTSC
T ss_pred ccC-CCccEEEEEECCEEE-EEEEecC--CCCCeecCC-ceEEEeeCCCHHHHHHHHHHHHHhCCCCEEEEEEEEcCCCC
Confidence 999 699999999999998 5666676 899999996 577789999999999999999999 7999999999998875
Q ss_pred -EEEeccC--ccccccchhhHHHHHHHHHHHHHHhhCC
Q 005046 282 -YVCDVNG--WSFVKNSYKYYDDAACVLRKMFLEAKAP 316 (716)
Q Consensus 282 -yV~DVNg--wSFVK~n~kYYddcA~IL~~~~l~~~~~ 316 (716)
||||||+ -++.++.. .+++.-+...+++.+..
T Consensus 288 ~~VlEVN~~~~P~~~~~~---~~~~~~Ia~~ii~~i~~ 322 (344)
T 2p0a_A 288 DYIIEVMDSSMPLIGEHV---EEDRQLMADLVVSKMSQ 322 (344)
T ss_dssp EEEEEEECTTCCCCGGGH---HHHHHHHHHHHHHHHHT
T ss_pred EEEEEEcCCCCCcccchh---hhHHHHHHHHHHHHHHH
Confidence 8999999 66666444 45565556666665533
No 4
>1pk8_A RAT synapsin I; ATP binding, ATP grAsp, calcium (II) ION, membrane protein; HET: ATP; 2.10A {Rattus norvegicus} SCOP: c.30.1.5 d.142.1.3 PDB: 1px2_A*
Probab=99.96 E-value=2.6e-29 Score=272.82 Aligned_cols=220 Identities=15% Similarity=0.153 Sum_probs=171.7
Q ss_pred CcCeeeccccCCC-----cHHHHHHHHHhcCCcccCCchhhhHhhhH----HHHHHHHHhCCC---CCCcEEEEecCCCc
Q 005046 56 ICDCLIAFYSSGY-----PLEKAESYATLRKPFLVNELEPQHLLHDR----RKVYEQLEKYGI---PVPRYALVNREVPY 123 (716)
Q Consensus 56 ~~D~lIsf~s~gf-----pl~kai~y~~lr~p~~iNdl~~q~~l~DR----~~~lqiL~~~gI---P~P~t~~~~r~~~~ 123 (716)
..|++|.+-.+.. ....++++++..|.+++|++.++.+++|| ..++++|.+.|+ |+|.+.+.. +
T Consensus 180 ~~DaviiR~~~~~~~~~~~yr~vlr~lE~~GvpviNs~~sI~~~~DK~~vf~~~l~ll~~~gi~~iP~t~~t~~~-~--- 255 (422)
T 1pk8_A 180 KPDFVLIRQHAFSMARNGDYRSLVIGLQYAGIPSVNSLHSVYNFCDKPWVFAQMVRLHKKLGTEEFPLIDQTFYP-N--- 255 (422)
T ss_dssp CCSEEEECSCSBCSSTTCBCHHHHHHHHHTTCCEESCHHHHHHTSSHHHHHHHHHHHHHHHCTTTSCBCCCEEES-S---
T ss_pred CCCEEEEeccccccccchhHHHHHHHHHHCCccccCCHHHHHHhCCccHHHHHHHHHHHhCCCCCCCCCceEecC-c---
Confidence 6799999887655 12578899999999999999999999999 788999999999 844444442 1
Q ss_pred cccccccCccceeeecCeeecCcEEEeeccccCcceeEEeccCCCChHHHHHhhhCCCcccccccccccc-cCcceEEee
Q 005046 124 QELDYFIEEEDFVEVHGNRFWKPFVEKPVHGDDHSIMIYYPSSAGGGMKELFRKVGNRSSEFHPDVRRVR-REGSYIYEE 202 (716)
Q Consensus 124 ~~~~~~~e~~d~I~v~G~~~~kPfVeKpv~GedHni~IYyp~~~GgG~~rLfrkign~sS~~~p~~~~~r-~~gsyIyQE 202 (716)
..+.+.. ++.|+|+||+.|+ +|-|+. |++......+..+ .++ .+..|++||
T Consensus 256 --------~~~~i~~----~g~PvVvKp~~GS-----------~G~GV~-lve~~~~l~~ii~----~~~~~~~~~~vQE 307 (422)
T 1pk8_A 256 --------HKEMLSS----TTYPVVVKMGHAH-----------SGMGKV-KVDNQHDFQDIAS----VVALTKTYATAEP 307 (422)
T ss_dssp --------GGGCCCC----SSSSEEEEESSCC-----------TTTTEE-EECSHHHHHHHHH----HHHHHTSCEEEEE
T ss_pred --------hhhhhhc----cCCCEEEEeCCCC-----------ceeCeE-EeCCHHHHHHHHH----HHhccCceEEEEe
Confidence 1233332 3589999999999 999986 6655543333333 333 345567899
Q ss_pred ccCCCCceeEEEEECCceeEEEeecCCCCCCceeecCCCCceeeeeeCCHHHHHHHHHHHHHh-cCceeeEeEEeeCCC-
Q 005046 203 FMPTGGTDVKVYTVGPEYAHAEARKSPVVDGVVMRNPDGKEVRYPVLLTPNEKQMAREVCIAF-RQAVCGFDLLRCEGR- 280 (716)
Q Consensus 203 Fi~~~G~DIKvytVG~~~vhAe~RKSPv~DG~vrrN~~gke~r~pv~Lt~eEk~iA~ka~kaf-gq~VcGfDLLRs~g~- 280 (716)
||+ .|.||||+|||++++ |+.|+++ .|.|++|++ ++...++.||++++++|.+++++| |+.|||||||++++|
T Consensus 308 fI~-~g~DIRv~VVGg~vv-a~~Rr~~--~g~WrtNvg-~g~~e~i~lt~e~~elA~kAaka~gGldiaGVDlL~s~dG~ 382 (422)
T 1pk8_A 308 FID-AKYDVRVQKIGQNYK-AYMRTSV--SGNWKTNTG-SAMLEQIAMSDRYKLWVDTCSEIFGGLDICAVEALHGKDGR 382 (422)
T ss_dssp CCC-EEEEEEEEEETTEEE-EEEEEES--SSCSSTTSS-CEEEEEECCCHHHHHHHHHHTTGGGCCSEEEEEEEEETTSC
T ss_pred ecC-CCceEEEEEECCEEE-EEEEEcC--CCCceeccC-ceeeeeeCCCHHHHHHHHHHHHHhCCCCEEEEEEEEcCCCC
Confidence 999 699999999999998 6666675 899999996 577789999999999999999999 899999999999977
Q ss_pred cEEEeccC--ccccccchhhHHHHHHHHHHHHHHhhC
Q 005046 281 SYVCDVNG--WSFVKNSYKYYDDAACVLRKMFLEAKA 315 (716)
Q Consensus 281 syV~DVNg--wSFVK~n~kYYddcA~IL~~~~l~~~~ 315 (716)
.||||||+ -++.++.. .+.+.-+.++++..+.
T Consensus 383 ~~VlEVN~s~~P~~~g~~---~~~~~~IA~~ii~~i~ 416 (422)
T 1pk8_A 383 DHIIEVVGSSMPLIGDHQ---DEDKQLIVELVVNKMT 416 (422)
T ss_dssp EEEEEEECTTCCCCTTCH---HHHHHHHHHHHHHHHH
T ss_pred EEEEEECCCCCCCccchh---hhHHHHHHHHHHHHHH
Confidence 58999999 56666554 3555555566665553
No 5
>2q7d_A Inositol-tetrakisphosphate 1-kinase; inositol kinase, ITPK1, inositol 1,3,4-5/6 phosphate, inositol phosphate, inositolphosphate; HET: ANP; 1.60A {Homo sapiens} PDB: 2qb5_A* 2odt_X
Probab=99.95 E-value=3.7e-27 Score=249.27 Aligned_cols=274 Identities=18% Similarity=0.241 Sum_probs=194.2
Q ss_pred CCeeEEEEeecCCccCChhHHHHHHHhhcCCceEEEEeCcceeecCCCcccCCcCeeeccccCCCc-----------HHH
Q 005046 4 HKKITIGVCVMEKKVFSAPMGQILDRLQAFGEFEVIHFGDKVILEDPIEKWPICDCLIAFYSSGYP-----------LEK 72 (716)
Q Consensus 4 ~~~i~iGVCaM~~Ka~SkPm~~IL~rL~~~g~feiiiF~d~vIL~e~ve~wP~~D~lIsf~s~gfp-----------l~k 72 (716)
.+..+||.|--.+|.+|--.+.+++-|.+.| ++++.+.-. .+......+|++|......++ ...
T Consensus 16 ~~~~~vG~~l~~kk~~~~~~~~l~~al~~~G-~~~~~iD~~----~~~~~~~~~Dvvi~~l~~~~~ea~~~d~~~~~~~~ 90 (346)
T 2q7d_A 16 LKGKRVGYWLSEKKIKKLNFQAFAELCRKRG-MEVVQLNLS----RPIEEQGPLDVIIHKLTDVILEADQNDSQSLELVH 90 (346)
T ss_dssp GTTCEEEEECCHHHHHHHTHHHHHHHHHTTT-CEEEECCTT----SCSGGGCCCSEEEECCHHHHHHHHTTCHHHHHHHH
T ss_pred cCceEEEEEECcccchhhhHHHHHHHHHhCC-cEEEEcccc----cchhhcCCCCEEEeCCcccccccccCchhHHHHHH
Confidence 3568999999999988887788888888776 677666543 233444689999998876433 223
Q ss_pred HHHHHH--hcCCcccCCchhhhHhhhHHHHHHHHHhC-------CCCCCcEEEEecCCCccccccccCccceeeecCeee
Q 005046 73 AESYAT--LRKPFLVNELEPQHLLHDRRKVYEQLEKY-------GIPVPRYALVNREVPYQELDYFIEEEDFVEVHGNRF 143 (716)
Q Consensus 73 ai~y~~--lr~p~~iNdl~~q~~l~DR~~~lqiL~~~-------gIP~P~t~~~~r~~~~~~~~~~~e~~d~I~v~G~~~ 143 (716)
.++.++ ..+.++||+..++..++||+.++++|++. |||+|+|+++.+... . +..+.+...+ +
T Consensus 91 ~l~~~~~~~~gv~vinp~~ai~~~~dk~~~~~~L~k~~~~~~~~gIp~P~t~~~~~~~~-~------~~~~~~~~~~--l 161 (346)
T 2q7d_A 91 RFQEYIDAHPETIVLDPLPAIRTLLDRSKSYELIRKIEAYMEDDRICSPPFMELTSLCG-D------DTMRLLEKNG--L 161 (346)
T ss_dssp HHHHHHHHCTTSEEESCHHHHHHTTBHHHHHHHHHHHHHHHCBTTEECCCEEEECSCCC-T------THHHHHHHTT--C
T ss_pred HHHHHHHHCCCeEEcCCHHHHHHhhhHHHHHHHHHhhcccccCCCCCCCCEEEEeCCCH-H------HHHHHHHhcC--C
Confidence 333333 35899999999999999999999999997 999999999974311 1 1122222122 4
Q ss_pred cCcEEEeecccc---CcceeEEeccCCCChHHHHHhhhCCCcccccccccccccCcceEEeeccCCCCceeEEEEECCce
Q 005046 144 WKPFVEKPVHGD---DHSIMIYYPSSAGGGMKELFRKVGNRSSEFHPDVRRVRREGSYIYEEFMPTGGTDVKVYTVGPEY 220 (716)
Q Consensus 144 ~kPfVeKpv~Ge---dHni~IYyp~~~GgG~~rLfrkign~sS~~~p~~~~~r~~gsyIyQEFi~~~G~DIKvytVG~~~ 220 (716)
+.|+|+||+.|+ -|++.+-+.. .. +. . .+..+++||||+.+|.|+||||||+.+
T Consensus 162 g~P~VvKP~~g~Gs~s~~v~~v~~~----------------~~-l~----~--~~~~~lvQefI~~~G~dirv~VvG~~v 218 (346)
T 2q7d_A 162 TFPFICKTRVAHGTNSHEMAIVFNQ----------------EG-LN----A--IQPPCVVQNFINHNAVLYKVFVVGESY 218 (346)
T ss_dssp CSSEEEECSBCSSTTCCEEEEECSG----------------GG-TT----C----CCEEEEECCCCTTEEEEEEEETTEE
T ss_pred CCCEEEEecCCCcceeeeeEEecCH----------------HH-HH----h--cCCCEEEEEeeCCCCeEEEEEEECCEE
Confidence 699999999763 3333332221 11 11 1 245699999999899999999999999
Q ss_pred eEEEeecCCCC-CC-------ceee-cCC-CCceee---------eeeC--CHHHHHHHHHHHHHhcCceeeEeEEeeC-
Q 005046 221 AHAEARKSPVV-DG-------VVMR-NPD-GKEVRY---------PVLL--TPNEKQMAREVCIAFRQAVCGFDLLRCE- 278 (716)
Q Consensus 221 vhAe~RKSPv~-DG-------~vrr-N~~-gke~r~---------pv~L--t~eEk~iA~ka~kafgq~VcGfDLLRs~- 278 (716)
++++.|..|-+ .| .|.+ |.+ +|+.++ ...+ +++.+++|.++++++|++++|||++++.
T Consensus 219 ~~~~r~sl~~~~~~~~~~~~~~f~s~~~~~~g~~~~~~~~~~~~~~~~~~~~~el~~lA~~a~~alGl~~~gvDii~~~~ 298 (346)
T 2q7d_A 219 TVVQRPSLKNFSAGTSDRESIFFNSHNVSKPESSSVLTELDKIEGVFERPSDEVIRELSRALRQALGVSLFGIDIIINNQ 298 (346)
T ss_dssp EEEEEECCCCCC----CCCCEEEEGGGTSSTTCCCGGGCCSCCCSCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEECTT
T ss_pred EEEEEecCCCcCcCccccccccccceeeccCCccccccccccccccccCCChHHHHHHHHHHHHHhCCceEeeEEEeecC
Confidence 98866655411 01 2332 323 344321 2333 4688999999999999999999999986
Q ss_pred -CCcEEEeccCccccccchhhHHHHHHHHHHHHHHhh
Q 005046 279 -GRSYVCDVNGWSFVKNSYKYYDDAACVLRKMFLEAK 314 (716)
Q Consensus 279 -g~syV~DVNgwSFVK~n~kYYddcA~IL~~~~l~~~ 314 (716)
|++||+|||.|+=.++-.+|...+.+.|.+.+.+.-
T Consensus 299 ~g~~~VlEVN~~PG~~g~~~~~~~i~~~l~~~~~~~~ 335 (346)
T 2q7d_A 299 TGQHAVIDINAFPGYEGVSEFFTDLLNHIATVLQGQS 335 (346)
T ss_dssp TCCEEEEEEEESCCCTTCTTHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEEeCCccccccchHHHHHHHHHHHHhhccC
Confidence 679999999999999988898888877777665443
No 6
>1z2n_X Inositol 1,3,4-trisphosphate 5/6-kinase; inositol phosphate kinase, ATP-grAsp, transferase; HET: ADP; 1.20A {Entamoeba histolytica} PDB: 1z2o_X* 1z2p_X*
Probab=99.87 E-value=7.3e-22 Score=201.06 Aligned_cols=254 Identities=17% Similarity=0.240 Sum_probs=171.8
Q ss_pred CCCCCeeEEEEeecCCccCChhHHHHHHHhhcCCceEE--EEeCcceeecCCCcccC-CcCeeeccccCCCc-HHHHHHH
Q 005046 1 MEVHKKITIGVCVMEKKVFSAPMGQILDRLQAFGEFEV--IHFGDKVILEDPIEKWP-ICDCLIAFYSSGYP-LEKAESY 76 (716)
Q Consensus 1 ~~~~~~i~iGVCaM~~Ka~SkPm~~IL~rL~~~g~fei--iiF~d~vIL~e~ve~wP-~~D~lIsf~s~gfp-l~kai~y 76 (716)
|...+..+|||+.-+++. |- .+...+.+.| +++ +++.-.. |...+- .+|+++...+.-+. +..+++.
T Consensus 6 ~~~~~~m~i~il~~~~~~-s~---~l~~al~~~G-~~v~~~~~d~~~----~~~~~~~~~d~v~~~~~~~~~~~~~~l~~ 76 (324)
T 1z2n_X 6 MTTKQTVSLFIWLPESKQ-KT---LFISTKNHTQ-FELNNIIFDVTL----STELPDKEPNAIITKRTHPVGKMADEMRK 76 (324)
T ss_dssp ----CEEEEEEECCHHHH-HH---HBSSCCSEEE-EEETTEEEEEEE----ESSCCSSCCSEEEECCSCSSSHHHHHHHH
T ss_pred cccCCcEEEEEEEchhhh-hh---hHHHHHHhcC-cEEEEEEecCCC----CccccCCCceEEEEeccchHHHHHHHHHH
Confidence 556677899998855544 21 3333344433 777 7775422 332222 57988877644332 2455555
Q ss_pred HHh--cCCcccCCchhhhHhhhHHHHHHHHHhCCCCCCcEEEEecCCCccccccccCccceeeecCeeecCcEEEeeccc
Q 005046 77 ATL--RKPFLVNELEPQHLLHDRRKVYEQLEKYGIPVPRYALVNREVPYQELDYFIEEEDFVEVHGNRFWKPFVEKPVHG 154 (716)
Q Consensus 77 ~~l--r~p~~iNdl~~q~~l~DR~~~lqiL~~~gIP~P~t~~~~r~~~~~~~~~~~e~~d~I~v~G~~~~kPfVeKpv~G 154 (716)
+.. .+..++|+..+..++.||..++++|+++|||+|++..++.. + +..+.+.-.| ++.|+|+||..|
T Consensus 77 ~~~~~~g~~~~~~~~~~~~~~dK~~~~~~l~~~gi~~P~~~~~~~~---~------~~~~~~~~~~--~~~P~vvKP~~g 145 (324)
T 1z2n_X 77 YEKDHPKVLFLESSAIHDMMSSREEINALLIKNNIPIPNSFSVKSK---E------EVIQLLQSKQ--LILPFIVKPENA 145 (324)
T ss_dssp HHHHCTTSEEETCHHHHHHHTBHHHHHHHHHHTTCCCSCEEEESSH---H------HHHHHHHTTC--SCSSEEEEESBC
T ss_pred HHHhCCCCeEeCCHHHHHHHhCHHHHHHHHHHCCCCCCCEEEeCCH---H------HHHHHHHHcC--CCCCEEEeeCCC
Confidence 544 67678999999999999999999999999999999998733 1 1111121111 348999999997
Q ss_pred c-C---cceeEEeccCCCChHHHHHhhhCCCcccccccccccccCcceEEeeccCCCCceeEEEEECCceeEEEeecCCC
Q 005046 155 D-D---HSIMIYYPSSAGGGMKELFRKVGNRSSEFHPDVRRVRREGSYIYEEFMPTGGTDVKVYTVGPEYAHAEARKSPV 230 (716)
Q Consensus 155 e-d---Hni~IYyp~~~GgG~~rLfrkign~sS~~~p~~~~~r~~gsyIyQEFi~~~G~DIKvytVG~~~vhAe~RKSPv 230 (716)
. . |++++..... .+. ..+..+|+||||+..|.|++|+++|+++++++ |+++.
T Consensus 146 ~g~~~s~gv~~v~~~~-----------------~l~------~~~~~~lvqe~i~~~g~~~~v~v~g~~~~~~~-~~~~~ 201 (324)
T 1z2n_X 146 QGTFNAHQMKIVLEQE-----------------GID------DIHFPCLCQHYINHNNKIVKVFCIGNTLKWQT-RTSLP 201 (324)
T ss_dssp SSSSGGGEEEEECSGG-----------------GGT------TCCSSEEEEECCCCTTCEEEEEEETTEEEEEE-ECCCC
T ss_pred CCCccceeeEEEeCHH-----------------HHh------hcCCCEEEEEccCCCCcEEEEEEECCEEEEEE-ecCcc
Confidence 5 1 3333333211 111 12567999999998899999999999999985 54541
Q ss_pred -C-----------------------------------CCceeecCCCCceeeeeeCC-HHHHHHHHHHHHHhcCceeeEe
Q 005046 231 -V-----------------------------------DGVVMRNPDGKEVRYPVLLT-PNEKQMAREVCIAFRQAVCGFD 273 (716)
Q Consensus 231 -~-----------------------------------DG~vrrN~~gke~r~pv~Lt-~eEk~iA~ka~kafgq~VcGfD 273 (716)
+ .+.|+.|.+. +...+..++ ++.+++|.++++++|..+||||
T Consensus 202 ~~~~g~~~~~~~~~~~~~~~~~~p~~~~~k~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~a~~~~~~lg~~~~~vD 280 (324)
T 1z2n_X 202 NVHRCGIKSVDFNNQHLEDILSWPEGVIDKQDIIENSANRFGSKILE-DPILLNLTSEAEMRDLAYKVRCALGVQLCGID 280 (324)
T ss_dssp CCCCSSCCEEEEETTBGGGGGGSCTTSSCHHHHHHHHTTTTCCCBCS-CTTTTTSCCHHHHHHHHHHHHHHHTCSEEEEE
T ss_pred cccCCCccceeeccccchhhhccccccccccccccccccchhhcccc-CCccccCCCHHHHHHHHHHHHHHhCCcEEeeE
Confidence 1 2456677765 344577888 7999999999999999999999
Q ss_pred EEee-C-CCcEEEeccCccccccchhhH
Q 005046 274 LLRC-E-GRSYVCDVNGWSFVKNSYKYY 299 (716)
Q Consensus 274 LLRs-~-g~syV~DVNgwSFVK~n~kYY 299 (716)
++.. . |.+||+|||..+-...-..|.
T Consensus 281 ~~~~~~~g~~~vlEvN~~Pg~~~~~~~~ 308 (324)
T 1z2n_X 281 FIKENEQGNPLVVDVNVFPSYGGKVDFD 308 (324)
T ss_dssp EECGGGCSSCEEEEEEESCCTTSCBCHH
T ss_pred EEEEcCCCCEEEEEEcCCCCcCCCCCHH
Confidence 9987 4 569999999665444445554
No 7
>1uc8_A LYSX, lysine biosynthesis enzyme; alpha-aminoadipate pathway, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.00A {Thermus thermophilus} SCOP: c.30.1.6 d.142.1.7 PDB: 1uc9_A*
Probab=99.87 E-value=2.1e-21 Score=191.32 Aligned_cols=237 Identities=21% Similarity=0.208 Sum_probs=162.3
Q ss_pred hhHHHHHHHhhcCCceEEEEeCcc-eee--cCCCcccCCcC-eeeccccCCCcHHHHHHHHHhcCCcccCCchhhhHhhh
Q 005046 21 APMGQILDRLQAFGEFEVIHFGDK-VIL--EDPIEKWPICD-CLIAFYSSGYPLEKAESYATLRKPFLVNELEPQHLLHD 96 (716)
Q Consensus 21 kPm~~IL~rL~~~g~feiiiF~d~-vIL--~e~ve~wP~~D-~lIsf~s~gfpl~kai~y~~lr~p~~iNdl~~q~~l~D 96 (716)
...+.+...+.+.| ++++++.-. ... ......|+.+| ++++.+++ +....+.++++..+...+|+..+..+++|
T Consensus 11 ~~~~~~~~a~~~~G-~~v~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~-~~~~~~~~~l~~~g~~~~~~~~~~~~~~d 88 (280)
T 1uc8_A 11 PDERMLFERAEALG-LPYKKVYVPALPMVLGERPKELEGVTVALERCVSQ-SRGLAAARYLTALGIPVVNRPEVIEACGD 88 (280)
T ss_dssp HHHHHHHHHHHHHT-CCEEEEEGGGCCEETTBCCGGGTTCCEEEECCSSH-HHHHHHHHHHHHTTCCEESCHHHHHHHHB
T ss_pred HHHHHHHHHHHHcC-CcEEEEehhhceeeccCCCcccCCCCEEEECCccc-hhhHHHHHHHHHCCCceeCCHHHHHHhCC
Confidence 34566777777766 666665431 111 11013478899 88887763 22345667778888777899999999999
Q ss_pred HHHHHHHHHhCCCCCCcEEEEecCCCccccccccCccceeeecCeeecCcEEEeeccccCcceeEEeccCCCChHHHHHh
Q 005046 97 RRKVYEQLEKYGIPVPRYALVNREVPYQELDYFIEEEDFVEVHGNRFWKPFVEKPVHGDDHSIMIYYPSSAGGGMKELFR 176 (716)
Q Consensus 97 R~~~lqiL~~~gIP~P~t~~~~r~~~~~~~~~~~e~~d~I~v~G~~~~kPfVeKpv~GedHni~IYyp~~~GgG~~rLfr 176 (716)
|....++|+++|||+|++..+... + +....+. .++.|+|+||..|. .|.|+. +++
T Consensus 89 K~~~~~~l~~~gi~~p~~~~~~~~---~------~~~~~~~----~~~~p~vvKp~~g~-----------~~~gv~-~v~ 143 (280)
T 1uc8_A 89 KWATSVALAKAGLPQPKTALATDR---E------EALRLME----AFGYPVVLKPVIGS-----------WGRLLA-XXX 143 (280)
T ss_dssp HHHHHHHHHHTTCCCCCEEEESSH---H------HHHHHHH----HHCSSEEEECSBCC-----------BCSHHH-HHH
T ss_pred HHHHHHHHHHcCcCCCCeEeeCCH---H------HHHHHHH----HhCCCEEEEECCCC-----------Ccccce-ecc
Confidence 999999999999999999988632 1 1111111 23489999999997 566775 555
Q ss_pred hhCCCcccccccccccc--cCcceEEeeccCCCCceeEEEEECCceeEEEeecCCCCCCceeecCCCCceeeeeeCCHHH
Q 005046 177 KVGNRSSEFHPDVRRVR--REGSYIYEEFMPTGGTDVKVYTVGPEYAHAEARKSPVVDGVVMRNPDGKEVRYPVLLTPNE 254 (716)
Q Consensus 177 kign~sS~~~p~~~~~r--~~gsyIyQEFi~~~G~DIKvytVG~~~vhAe~RKSPv~DG~vrrN~~gke~r~pv~Lt~eE 254 (716)
....-...+.. +.... .+..+|+||||+..|.+++|+++|++++++..|++ +.|+.|.+.++...|..|+++.
T Consensus 144 ~~~el~~~~~~-~~~~~~~~~~~~lvqe~i~~~~~e~~v~v~~~~~~~~~~~~~----~~~~~~~~~g~~~~p~~l~~~~ 218 (280)
T 1uc8_A 144 XXXXXXXXXXX-KEVLGGFQHQLFYIQEYVEKPGRDIRVFVVGERAIAAIYRRS----AHWITNTARGGQAENCPLTEEV 218 (280)
T ss_dssp HHHC-------------CTTTTCEEEEECCCCSSCCEEEEEETTEEEEEEEC------------------CEECCCCHHH
T ss_pred cccccchhhhh-HhhhcccCCCcEEEEeccCCCCceEEEEEECCEEEEEEEEec----CCccccccCCccccCCCCCHHH
Confidence 44322222221 00012 26789999999988999999999999999888863 7899999988888899999999
Q ss_pred HHHHHHHHHHhcCceeeEeEEeeCCCcEEEeccCc
Q 005046 255 KQMAREVCIAFRQAVCGFDLLRCEGRSYVCDVNGW 289 (716)
Q Consensus 255 k~iA~ka~kafgq~VcGfDLLRs~g~syV~DVNgw 289 (716)
+++|.++++++|..++|||++.+.+++||+|||..
T Consensus 219 ~~~~~~~~~~lg~g~~~vD~~~~~~g~~~iEiN~r 253 (280)
T 1uc8_A 219 ARLSVKAAEAVGGGVVAVDLFESERGLLVNEVNHT 253 (280)
T ss_dssp HHHHHHHHHHTTCSEEEEEEEEETTEEEEEEEETT
T ss_pred HHHHHHHHHHhCCCeEEEEEEEeCCCeEEEEEeCC
Confidence 99999999999999999999999888999999964
No 8
>3ln6_A Glutathione biosynthesis bifunctional protein GSH; gamma-glutamyl cysteine ligase domain, ATP-grAsp domain, HYB enzyme; 2.95A {Streptococcus agalactiae serogroup V}
Probab=99.79 E-value=5.7e-20 Score=211.92 Aligned_cols=184 Identities=20% Similarity=0.247 Sum_probs=140.2
Q ss_pred cccCCchhhhHhhhHHHHHHHHHhCCCCCCcEEEEecCCCccccccccCccceeeecCeeecCcEEEeeccccCcceeEE
Q 005046 83 FLVNELEPQHLLHDRRKVYEQLEKYGIPVPRYALVNREVPYQELDYFIEEEDFVEVHGNRFWKPFVEKPVHGDDHSIMIY 162 (716)
Q Consensus 83 ~~iNdl~~q~~l~DR~~~lqiL~~~gIP~P~t~~~~r~~~~~~~~~~~e~~d~I~v~G~~~~kPfVeKpv~GedHni~IY 162 (716)
...+...+..+++||..+.++|+++|||+|++.++.... +..+.+ ...++.|+|+||..|.
T Consensus 471 tg~~~~~a~~~~~DK~~tk~lL~~~GIPvP~~~~~~~~~---------ea~~~~---~~~~g~PvVVKP~~G~------- 531 (750)
T 3ln6_A 471 TSKDNYIVPLAMANKVVTKKILDEKHFPTPFGDEFTDRK---------EALNYF---SQIQDKPIVVKPKSTN------- 531 (750)
T ss_dssp CTTSCTHHHHHTTTSHHHHHHHHHTTCCCCCCCCEETTT---------THHHHH---HHSSSSCEEEEETTCC-------
T ss_pred eCCCHHHHHHHHhCHHHHHHHHHHCCcCCCCEEEECCHH---------HHHHHH---HHhcCCcEEEEeCCCC-------
Confidence 345566778888999999999999999999999887431 111222 1223599999999997
Q ss_pred eccCCCChHHHHHhhhCCCccccccccc-ccccCcceEEeeccCCCCceeEEEEECCceeEEEeecCCCC--C-------
Q 005046 163 YPSSAGGGMKELFRKVGNRSSEFHPDVR-RVRREGSYIYEEFMPTGGTDVKVYTVGPEYAHAEARKSPVV--D------- 232 (716)
Q Consensus 163 yp~~~GgG~~rLfrkign~sS~~~p~~~-~~r~~gsyIyQEFi~~~G~DIKvytVG~~~vhAe~RKSPv~--D------- 232 (716)
+|.|+. +++.+.+....... +. ..+.+..+|+||||+ |.|++|+|+|+++++|+.|.+|.+ |
T Consensus 532 ----~G~GV~-iv~~~~s~eel~~a-~~~~~~~~~~vlVEefI~--G~E~~v~Vvgg~vvaa~~r~p~~v~GdG~~tI~e 603 (750)
T 3ln6_A 532 ----FGLGIS-IFKTSANLASYEKA-IDIAFTEDSAILVEEYIE--GTEYRFFVLEGDCIAVLLRVAANVVGDGIHTISQ 603 (750)
T ss_dssp ----SSSSCE-EESSCCCHHHHHHH-HHHHHHHCSEEEEEECCC--SEEEEEEEETTEEEEEEEEECCEEECCTTCCHHH
T ss_pred ----CCCCEE-EEeCCCCHHHHHHH-HHHHHhhCCcEEEEeccC--CCEEEEEEECCEEEEEEEEecceEecCCccCHHH
Confidence 677765 44433222221110 00 112467899999998 899999999999999999998743 1
Q ss_pred ---------------------------------------------Cc-----eeecCCCCceeeee--eCCHHHHHHHHH
Q 005046 233 ---------------------------------------------GV-----VMRNPDGKEVRYPV--LLTPNEKQMARE 260 (716)
Q Consensus 233 ---------------------------------------------G~-----vrrN~~gke~r~pv--~Lt~eEk~iA~k 260 (716)
|+ +++|.+.|+....+ .++|+.+++|.+
T Consensus 604 LI~~~n~dp~rg~~~~~~l~~i~~d~~~~~~l~~~g~~~~~V~~~Ge~v~L~~~~Nls~Gg~~~d~td~i~p~~~~~a~~ 683 (750)
T 3ln6_A 604 LVKLKNQNPLRGYDHRSPLEVIELGEVEQLMLEQQGYTVNSIPPEGTKIELRRNSNISTGGDSIDVTNTMDPTYKQLAAE 683 (750)
T ss_dssp HHHHHTTCTTEESSSCCSEECCCCCHHHHHHHHHTTCCSSCCCCTTCEEESCSSCCTTTTCEEEECTTTSCHHHHHHHHH
T ss_pred HHHhhccCccccccccCccccccccHHHHHHHHHcCCCccccCCCCCEEEEeecccccCCCceeeccccCCHHHHHHHHH
Confidence 23 67999999999999 799999999999
Q ss_pred HHHHhcCceeeEeEEeeC---------CCcEEEeccCccccc
Q 005046 261 VCIAFRQAVCGFDLLRCE---------GRSYVCDVNGWSFVK 293 (716)
Q Consensus 261 a~kafgq~VcGfDLLRs~---------g~syV~DVNgwSFVK 293 (716)
||+++|+.||||||+... ++.+|||||+=+-.+
T Consensus 684 aa~~igl~~~GvDli~~di~~~~~~~~~~~~iiEvN~~pg~~ 725 (750)
T 3ln6_A 684 MAEAMGAWVCGVDLIIPNATQAYSKDKKNATCIELNFNPLMY 725 (750)
T ss_dssp HHHHHTCSSCEEEEEESCSSSCCCTTTTCCEEEEEESSCCCH
T ss_pred HHHHhCCCeEEEEEEecCccccccccCCCeEEEEEcCCcchh
Confidence 999999999999999874 356899999876443
No 9
>3ln7_A Glutathione biosynthesis bifunctional protein GSH; gamma-glutamylcysteine ligase domain, ATP-grAsp domain, HYBR enzyme, ATP-binding; 3.20A {Pasteurella multocida}
Probab=99.78 E-value=7.6e-20 Score=211.11 Aligned_cols=180 Identities=21% Similarity=0.258 Sum_probs=136.3
Q ss_pred CCchhhhHhhhHHHHHHHHHhCCCCCCcEEEEecCCCccccccccCccceeeecCeeecCcEEEeeccccCcceeEEecc
Q 005046 86 NELEPQHLLHDRRKVYEQLEKYGIPVPRYALVNREVPYQELDYFIEEEDFVEVHGNRFWKPFVEKPVHGDDHSIMIYYPS 165 (716)
Q Consensus 86 Ndl~~q~~l~DR~~~lqiL~~~gIP~P~t~~~~r~~~~~~~~~~~e~~d~I~v~G~~~~kPfVeKpv~GedHni~IYyp~ 165 (716)
++..+..+++||..+.++|+++|||+|++.++... ++....-...++.|+|+||..|.
T Consensus 479 ~s~~aa~~~~DK~~tk~lL~~~GIPvP~~~~~~~~------------~ea~~~~~~~~g~PvVVKP~~g~---------- 536 (757)
T 3ln7_A 479 DSYISPLIMENKVVTKKVLQKAGFNVPQSVEFTSL------------EKAVASYALFENRAVVIKPKSTN---------- 536 (757)
T ss_dssp SBSHHHHHHHHSHHHHHHHHHHTCCCCCEEEESCH------------HHHHHGGGGSSSSCEEEEESSCS----------
T ss_pred CHHHHHHHhcCHHHHHHHHHHCCcCCCCEEEECCH------------HHHHHHHHHhcCCCEEEEeCCCC----------
Confidence 45567788899999999999999999999988732 12211111234599999999997
Q ss_pred CCCChHHHHHh-hhCCCccccccccc-ccccCcceEEeeccCCCCceeEEEEECCceeEEEeecCCCC------------
Q 005046 166 SAGGGMKELFR-KVGNRSSEFHPDVR-RVRREGSYIYEEFMPTGGTDVKVYTVGPEYAHAEARKSPVV------------ 231 (716)
Q Consensus 166 ~~GgG~~rLfr-kign~sS~~~p~~~-~~r~~gsyIyQEFi~~~G~DIKvytVG~~~vhAe~RKSPv~------------ 231 (716)
.|.|+. ++. ++.+... +..-+. ..+.+..+|+||||+ |+|++|+|+|+++++|+.|.+|-+
T Consensus 537 -~G~GV~-iv~~~v~~~ee-l~~al~~a~~~~~~vlVEefI~--G~Ei~v~Vlggkvvaai~R~p~~VvGDG~~ti~eLi 611 (757)
T 3ln7_A 537 -YGLGIT-IFQQGVQNRED-FAKALEIAFREDKEVMVEDYLV--GTEYRFFVLGDETLAVLLRVPANVVGDSVHSVAELV 611 (757)
T ss_dssp -TTTTCE-ECSSCCCCHHH-HHHHHHHHHHHCSSEEEEECCC--SEEEEEEEETTEEEEEEEECCSEEEGGGCCCHHHHH
T ss_pred -CCCCeE-EecCCCCCHHH-HHHHHHHHHhcCCcEEEEEcCC--CcEEEEEEECCEEEEEEEEecccccCCCcccHHHHH
Confidence 666765 331 1122111 111000 122467899999995 899999999999999999998632
Q ss_pred ------------------------------------------CCc-----eeecCCCCceeeee--eCCHHHHHHHHHHH
Q 005046 232 ------------------------------------------DGV-----VMRNPDGKEVRYPV--LLTPNEKQMAREVC 262 (716)
Q Consensus 232 ------------------------------------------DG~-----vrrN~~gke~r~pv--~Lt~eEk~iA~ka~ 262 (716)
.|+ +++|.+.|+....+ .++|+.+++|.+||
T Consensus 612 ~~~n~~p~rg~~~~~~l~~I~ld~~~~~~L~~~g~~~d~Vp~~Ge~v~L~~~~Nls~GG~~~dvtd~i~p~~~~~a~~aa 691 (757)
T 3ln7_A 612 AMKNDHPLRGDGSRTPLKKIALGEIEQLQLKEQGLTIDSIPAKDQLVQLRANSNISTGGDSIDMTDEMHESYKQLAVGIT 691 (757)
T ss_dssp HHHHTSTTEECSSSSSEECCCCCHHHHHHHHHHTCCSSSCCCSSCEEECCSSCCGGGTCCEEECTTTSCHHHHHHHHHHH
T ss_pred HhhcccccccccccCccccccccHHHHHHHHHcCCCccccCCCCCEEEeecccccccCccceeccccCCHHHHHHHHHHH
Confidence 243 58899999999999 99999999999999
Q ss_pred HHhcCceeeEeEEeeC---------CCcEEEeccCcccc
Q 005046 263 IAFRQAVCGFDLLRCE---------GRSYVCDVNGWSFV 292 (716)
Q Consensus 263 kafgq~VcGfDLLRs~---------g~syV~DVNgwSFV 292 (716)
+++|+.||||||+... ++..|+|||+=+-.
T Consensus 692 ~~lGl~~~GvDli~~di~~p~~~~~~~~~iiEvN~~P~~ 730 (757)
T 3ln7_A 692 KAMGAAVCGVDLIIPDLKQPATPNLTSWGVIEANFNPMM 730 (757)
T ss_dssp HHHTCSEEEEEEEESCSSSCCCSSTTTCEEEEEESSCCH
T ss_pred HHhCCCEEEEEEEecCccccccccCCCeEEEEEcCCcch
Confidence 9999999999999882 46789999987644
No 10
>1gsa_A Glutathione synthetase; ligase; HET: ADP GSH; 2.00A {Escherichia coli} SCOP: c.30.1.3 d.142.1.1 PDB: 1gsh_A 2glt_A 1glv_A
Probab=99.76 E-value=3.4e-19 Score=178.18 Aligned_cols=198 Identities=13% Similarity=0.141 Sum_probs=147.8
Q ss_pred ccCCcCeeeccccCCCc-----HHHHHHHHHhcCCcccCCchhhhHhhhHHHHHHHHHhCCCCCCcEEEEecCCCccccc
Q 005046 53 KWPICDCLIAFYSSGYP-----LEKAESYATLRKPFLVNELEPQHLLHDRRKVYEQLEKYGIPVPRYALVNREVPYQELD 127 (716)
Q Consensus 53 ~wP~~D~lIsf~s~gfp-----l~kai~y~~lr~p~~iNdl~~q~~l~DR~~~lqiL~~~gIP~P~t~~~~r~~~~~~~~ 127 (716)
.|..+|+++.+...++. ....++.++..+..++|+..+..++.||+..+++|+ |+|+|..++..
T Consensus 76 ~~~~~d~v~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~dK~~~~~~l~----~~P~t~~~~~~------- 144 (316)
T 1gsa_A 76 PLADLDVILMRKDPPFDTEFIYATYILERAEEKGTLIVNKPQSLRDCNEKLFTAWFSD----LTPETLVTRNK------- 144 (316)
T ss_dssp EGGGSSEEEECCCCCCCHHHHHHHHHHHHHHHTTCEEESCHHHHHHCCTTGGGGGGTT----TSCCEEEESCH-------
T ss_pred ccccCCEEEEecCCCCchhhHHHHHHHHHHHHcCCeEecCHHHHHhhhhHHHHHhhhh----cCCCeEEeCCH-------
Confidence 45679999987655442 235677777788778899999999999999999887 99999988632
Q ss_pred cccCccceeeecCeeecCcEEEeeccccCcceeEEeccCCCChHHHHHhhhCCCcccccccccccc--cCcceEEeeccC
Q 005046 128 YFIEEEDFVEVHGNRFWKPFVEKPVHGDDHSIMIYYPSSAGGGMKELFRKVGNRSSEFHPDVRRVR--REGSYIYEEFMP 205 (716)
Q Consensus 128 ~~~e~~d~I~v~G~~~~kPfVeKpv~GedHni~IYyp~~~GgG~~rLfrkign~sS~~~p~~~~~r--~~gsyIyQEFi~ 205 (716)
++....- ..++ |+|+||..|. .|.|+. +++. +. .++..-+.... ....+|+||||+
T Consensus 145 -----~~~~~~~-~~~~-p~vvKP~~g~-----------~g~Gv~-~v~~--~~-~~l~~~~~~~~~~~~~~~lvqe~i~ 202 (316)
T 1gsa_A 145 -----AQLKAFW-EKHS-DIILKPLDGM-----------GGASIF-RVKE--GD-PNLGVIAETLTEHGTRYCMAQNYLP 202 (316)
T ss_dssp -----HHHHHHH-HHHS-SEEEECSSCC-----------TTTTCE-EECT--TC-TTHHHHHHHHTTTTTSCEEEEECCG
T ss_pred -----HHHHHHH-HHcC-CEEEEECCCC-----------CcccEE-EecC--Ch-HHHHHHHHHHHhcCCceEEEecccC
Confidence 1211111 1234 9999999986 444443 1110 11 11110000111 246799999999
Q ss_pred C-CCceeEEEEECCceeE-EEeecCCCCCCceeecCCCCceeeeeeCCHHHHHHHHHHHHH---hcCceeeEeEEeeCCC
Q 005046 206 T-GGTDVKVYTVGPEYAH-AEARKSPVVDGVVMRNPDGKEVRYPVLLTPNEKQMAREVCIA---FRQAVCGFDLLRCEGR 280 (716)
Q Consensus 206 ~-~G~DIKvytVG~~~vh-Ae~RKSPv~DG~vrrN~~gke~r~pv~Lt~eEk~iA~ka~ka---fgq~VcGfDLLRs~g~ 280 (716)
. .+.|++|+++|+++++ +..|+++ +|.|+.|.|.|+...|..|+++.+++|.+++++ +|..++|||++ |
T Consensus 203 ~~~~~~~~v~~~~g~~~~~~~~r~~~--~~~~~~~~~~gg~~~~~~~~~~~~~~a~~~~~~l~~~g~~~~~vD~~----g 276 (316)
T 1gsa_A 203 AIKDGDKRVLVVDGEPVPYCLARIPQ--GGETRGNLAAGGRGEPRPLTESDWKIARQIGPTLKEKGLIFVGLDII----G 276 (316)
T ss_dssp GGGGCEEEEEEETTEECSEEEEEECC--SSCSCCCGGGTCEEEEEECCHHHHHHHHHHHHHHHHTTCCEEEEEEE----T
T ss_pred CCCCCCEEEEEECCEEeeeEEEEeCC--CCCceeEEccCCccccCCCCHHHHHHHHHHHHHHHhCCCcEEEEEec----C
Confidence 7 5899999999999998 9999975 789999999888889999999999999999987 59999999998 4
Q ss_pred cEEEeccCc
Q 005046 281 SYVCDVNGW 289 (716)
Q Consensus 281 syV~DVNgw 289 (716)
+||+|||..
T Consensus 277 ~~~iEvN~r 285 (316)
T 1gsa_A 277 DRLTEINVT 285 (316)
T ss_dssp TEEEEEECS
T ss_pred CEEEEEcCC
Confidence 699999973
No 11
>3r5x_A D-alanine--D-alanine ligase; alpha-beta structure, cytosol, structural genomics, for structural genomics of infectious diseases, csgid; HET: MSE ATP; 2.00A {Bacillus anthracis} PDB: 3r23_A*
Probab=99.75 E-value=1.5e-18 Score=175.51 Aligned_cols=253 Identities=13% Similarity=0.153 Sum_probs=168.6
Q ss_pred HHHHHHHhhcCCceEEEEeCcceeecCCCcccCCcCeeeccccCCCcHH-HHHHHHHhcCCccc-CCchhhhHhhhHHHH
Q 005046 23 MGQILDRLQAFGEFEVIHFGDKVILEDPIEKWPICDCLIAFYSSGYPLE-KAESYATLRKPFLV-NELEPQHLLHDRRKV 100 (716)
Q Consensus 23 m~~IL~rL~~~g~feiiiF~d~vIL~e~ve~wP~~D~lIsf~s~gfpl~-kai~y~~lr~p~~i-Ndl~~q~~l~DR~~~ 100 (716)
-+.|++-|.+.| ++++.++-.-. ...++....+|++++....++..+ .+...++..+..++ |+..+..+++||..+
T Consensus 24 ~~~v~~al~~~g-~~v~~i~~~~~-~~~~~~~~~~D~v~~~~~~~~ge~~~~~~~le~~gi~~~g~~~~~~~~~~dK~~~ 101 (307)
T 3r5x_A 24 GNEMIANLDKNK-YEIVPITLNEK-MDLIEKAKDIDFALLALHGKYGEDGTVQGTLESLGIPYSGSNMLSSGICMDKNIS 101 (307)
T ss_dssp HHHHHHHSCTTT-EEEEEEECSSG-GGHHHHTTTCSEEEECCCSHHHHSSHHHHHHHHHTCCBSSSCHHHHHHHHCHHHH
T ss_pred HHHHHHHHHHCC-CEEEEEcccCc-hhHHHhccCCCEEEEeCCCCCCcHHHHHHHHHHcCCCeeCcCHHHHHHHcCHHHH
Confidence 457777787766 88877653210 111344568999998765443221 23446667776555 669999999999999
Q ss_pred HHHHHhCCCCCCcEEEEecCCCccccccccCccc-eeeecCeeecCcEEEeeccccCcceeEEeccCCCChHHHHHhhhC
Q 005046 101 YEQLEKYGIPVPRYALVNREVPYQELDYFIEEED-FVEVHGNRFWKPFVEKPVHGDDHSIMIYYPSSAGGGMKELFRKVG 179 (716)
Q Consensus 101 lqiL~~~gIP~P~t~~~~r~~~~~~~~~~~e~~d-~I~v~G~~~~kPfVeKpv~GedHni~IYyp~~~GgG~~rLfrkig 179 (716)
.++|+++|||+|++..+.... +... .+. .++.|+|+||..|. .|.|+. ++.
T Consensus 102 ~~~l~~~Gip~p~~~~~~~~~---------~~~~~~~~----~~~~P~vvKP~~~~-----------~s~Gv~----~v~ 153 (307)
T 3r5x_A 102 KKILRYEGIETPDWIELTKME---------DLNFDELD----KLGFPLVVKPNSGG-----------SSVGVK----IVY 153 (307)
T ss_dssp HHHHHHTTCCCCCEEEEESSS---------CCCHHHHH----HHCSSEEEEECC---------------CCCE----EEC
T ss_pred HHHHHHCCCCCCCEEEEeChh---------hhhHHHHH----hcCCCEEEEeCCCC-----------CCCCEE----EeC
Confidence 999999999999999998431 1111 111 23589999999985 233332 111
Q ss_pred CCccccccccc-ccccCcceEEeeccCCCCceeEEEEECCceeEEEeecCCCCCC--ceeecC-CCCceeeeeeCCHHH-
Q 005046 180 NRSSEFHPDVR-RVRREGSYIYEEFMPTGGTDVKVYTVGPEYAHAEARKSPVVDG--VVMRNP-DGKEVRYPVLLTPNE- 254 (716)
Q Consensus 180 n~sS~~~p~~~-~~r~~gsyIyQEFi~~~G~DIKvytVG~~~vhAe~RKSPv~DG--~vrrN~-~gke~r~pv~Lt~eE- 254 (716)
+.. ++..-+. ..+.+..+|+||||+ |.+++|.++|+++.++..+.+. .+ .++++. ++|...+|+.|++++
T Consensus 154 ~~~-el~~~~~~~~~~~~~~lvee~i~--G~e~~v~v~~g~~~~~~~~~~~--~~~~~~~~~~~~~g~~~~p~~l~~~~~ 228 (307)
T 3r5x_A 154 DKD-ELISMLETVFEWDSEVVIEKYIK--GEEITCSIFDGKQLPIISIRHA--AEFFDYNAKYDDASTIEEVIELPAELK 228 (307)
T ss_dssp SHH-HHHHHHHHHHHHCSEEEEEECCC--SEEEEEEEETTEECCCEEEEEE--EEEETTEEEEEEEEEEEEECCCCHHHH
T ss_pred CHH-HHHHHHHHHHhcCCCEEEECCcC--CEEEEEEEECCEEeeEEEEEcC--CcccChhhcCCCCCCeEecCCCCHHHH
Confidence 111 0110000 112367899999998 8999999999988666555443 44 566666 677767799999976
Q ss_pred ---HHHHHHHHHHhcCc-eeeEeEEeeCCCcEEEeccCccccc-----------cchhhHHHHHHHHHHHH
Q 005046 255 ---KQMAREVCIAFRQA-VCGFDLLRCEGRSYVCDVNGWSFVK-----------NSYKYYDDAACVLRKMF 310 (716)
Q Consensus 255 ---k~iA~ka~kafgq~-VcGfDLLRs~g~syV~DVNgwSFVK-----------~n~kYYddcA~IL~~~~ 310 (716)
+++|.++++++|.. +++||++.+.|++||+|||..+-.. ....|-+-+++||..-+
T Consensus 229 ~~i~~~a~~~~~~lg~~G~~~vD~~~~~g~~~vlEiN~rpg~~~~s~~~~~~~~~G~~~~~li~~ll~~a~ 299 (307)
T 3r5x_A 229 ERVNKASLACYKALKCSVYARVDMMVKDGIPYVMEVNTLPGMTQASLLPKSADAAGIHYSKLLDMIIETSL 299 (307)
T ss_dssp HHHHHHHHHHHHHTTCCSEEEEEEEEETTEEEEEEEESSCCCSTTSHHHHHHHHTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCceEEEEEEEECCeEEEEEEcCCCCCCccCHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 88999999999998 9999999998889999999653221 22345555666665544
No 12
>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A* 3v4z_A*
Probab=99.72 E-value=3e-17 Score=164.52 Aligned_cols=234 Identities=14% Similarity=0.161 Sum_probs=151.0
Q ss_pred HHHHHHhhcCCceEEEEeCcceeecCCCccc--CCcCeeeccccCCCcHH-HHHHHHHhcCC-cccCCchhhhHhhhHHH
Q 005046 24 GQILDRLQAFGEFEVIHFGDKVILEDPIEKW--PICDCLIAFYSSGYPLE-KAESYATLRKP-FLVNELEPQHLLHDRRK 99 (716)
Q Consensus 24 ~~IL~rL~~~g~feiiiF~d~vIL~e~ve~w--P~~D~lIsf~s~gfpl~-kai~y~~lr~p-~~iNdl~~q~~l~DR~~ 99 (716)
+.+...|.+.| ++++++.-. +.+.... ..+|+++.....++..+ ...+.++..+. ++-|+..+..+++||..
T Consensus 24 ~~l~~al~~~G-~~v~~~~~~---~~~~~~~~~~~~d~v~~~~~~~~~e~~~~~~~~e~~g~~~~g~~~~~~~~~~dK~~ 99 (306)
T 1iow_A 24 AAVLAGLREGG-IDAYPVDPK---EVDVTQLKSMGFQKVFIALHGRGGEDGTLQGMLELMGLPYTGSGVMASALSMDKLR 99 (306)
T ss_dssp HHHHHHHHHTT-CEEEEECTT---TSCGGGTTTTTEEEEEECCCSTTTSSSHHHHHHHHHTCCBSSCCHHHHHHHHCHHH
T ss_pred HHHHHHHHHCC-CeEEEEecC---chHHHHhhccCCCEEEEcCCCCCCcchHHHHHHHHcCCCccCCCHHHHHHHcCHHH
Confidence 56777777765 788877643 2221111 36798887763332221 12334555564 45589999999999999
Q ss_pred HHHHHHhCCCCCCcEEEEecCCCccccccccC--ccceeeecCeeecCcEEEeeccccCcceeEEeccCCCChHHHHHhh
Q 005046 100 VYEQLEKYGIPVPRYALVNREVPYQELDYFIE--EEDFVEVHGNRFWKPFVEKPVHGDDHSIMIYYPSSAGGGMKELFRK 177 (716)
Q Consensus 100 ~lqiL~~~gIP~P~t~~~~r~~~~~~~~~~~e--~~d~I~v~G~~~~kPfVeKpv~GedHni~IYyp~~~GgG~~rLfrk 177 (716)
..++|+++|||+|++..+... ++....+ ....+ ..++.|+|+||..|. .|.|+. +
T Consensus 100 ~~~~l~~~gi~~p~~~~~~~~----~~~~~~~~~~~~~~----~~~~~p~vvKP~~g~-----------~~~gv~-~--- 156 (306)
T 1iow_A 100 SKLLWQGAGLPVAPWVALTRA----EFEKGLSDKQLAEI----SALGLPVIVKPSREG-----------SSVGMS-K--- 156 (306)
T ss_dssp HHHHHHHTTCCBCCEEEEEHH----HHHHCCCTHHHHHH----HTTCSSEEEEETTCC-----------TTTTCE-E---
T ss_pred HHHHHHHCCCCCCCeEEEchh----hhhccchhhhhhHH----hccCCCEEEEeCCCC-----------CCCCEE-E---
Confidence 999999999999999988732 0000000 00011 123489999999985 333432 1
Q ss_pred hCCCcccccccccc-cccCcceEEeeccCCCCceeEEEEECCceeEEEeecCCCCCC--ceeecCCCCcee--eeeeCCH
Q 005046 178 VGNRSSEFHPDVRR-VRREGSYIYEEFMPTGGTDVKVYTVGPEYAHAEARKSPVVDG--VVMRNPDGKEVR--YPVLLTP 252 (716)
Q Consensus 178 ign~sS~~~p~~~~-~r~~gsyIyQEFi~~~G~DIKvytVG~~~vhAe~RKSPv~DG--~vrrN~~gke~r--~pv~Lt~ 252 (716)
+.+.. ++..-+.. .+.+..+|+||||+ |.+++|.++|+++.++..+... ++ .++.|.+.|+.. .|..|++
T Consensus 157 v~~~~-el~~~~~~~~~~~~~~lvee~i~--g~e~~v~~~~g~~~~~~~~~~~--~~~~~~~~~~~~g~~~~~~p~~l~~ 231 (306)
T 1iow_A 157 VVAEN-ALQDALRLAFQHDEEVLIEKWLS--GPEFTVAILGEEILPSIRIQPS--GTFYDYEAKFLSDETQYFCPAGLEA 231 (306)
T ss_dssp ESSGG-GHHHHHHHHTTTCSEEEEEECCC--CCEEEEEEETTEECCCEEEECS--SSSSCHHHHHTCSCCEEESSCCCCH
T ss_pred eCCHH-HHHHHHHHHHhhCCCEEEEeCcC--CEEEEEEEECCCccceEEEEeC--CCeEchhheecCCCeeEEcCCCCCH
Confidence 21111 11100001 12367899999998 8999999999987777665432 22 344555545443 3556775
Q ss_pred ----HHHHHHHHHHHHhcCc-eeeEeEEeeC-CCcEEEeccCc
Q 005046 253 ----NEKQMAREVCIAFRQA-VCGFDLLRCE-GRSYVCDVNGW 289 (716)
Q Consensus 253 ----eEk~iA~ka~kafgq~-VcGfDLLRs~-g~syV~DVNgw 289 (716)
+-+++|.++++++|.. ++|+|++.+. |.+||+|||..
T Consensus 232 ~~~~~i~~~a~~~~~~lg~~G~~~vD~~~~~~g~~~~iEiN~r 274 (306)
T 1iow_A 232 SQEANLQALVLKAWTTLGCKGWGRIDVMLDSDGQFYLLEANTS 274 (306)
T ss_dssp HHHHHHHHHHHHHHHHHTCCSEEEEEEEECTTSCEEEEEEESS
T ss_pred HHHHHHHHHHHHHHHHcCCceEEEEEEEEcCCCCEEEEEecCC
Confidence 4578999999999996 9999999986 45999999965
No 13
>4eg0_A D-alanine--D-alanine ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.65A {Burkholderia ambifaria} PDB: 4egq_A 4egj_A
Probab=99.66 E-value=3.8e-16 Score=159.99 Aligned_cols=239 Identities=15% Similarity=0.110 Sum_probs=151.2
Q ss_pred hHHHHHHHhhcCCceEEEEeCcceeecCCCc--ccCCcCeeeccccCCCcH-HHHHHHHHhcCCccc-CCchhhhHhhhH
Q 005046 22 PMGQILDRLQAFGEFEVIHFGDKVILEDPIE--KWPICDCLIAFYSSGYPL-EKAESYATLRKPFLV-NELEPQHLLHDR 97 (716)
Q Consensus 22 Pm~~IL~rL~~~g~feiiiF~d~vIL~e~ve--~wP~~D~lIsf~s~gfpl-~kai~y~~lr~p~~i-Ndl~~q~~l~DR 97 (716)
--++|++-|.+.| ++++.++.. +..++ .+..+|++++....++-. ..+...++..+...+ |+..+..+++||
T Consensus 33 s~~~v~~al~~~g-~~v~~i~~~---~~~~~~l~~~~~D~v~~~~hg~~ge~~~~~~~le~~gip~~g~~~~~~~~~~dK 108 (317)
T 4eg0_A 33 SGRLVLQGLRDAG-IDAHPFDPA---ERPLSALKDEGFVRAFNALHGGYGENGQIQGALDFYGIRYTGSGVLGSALGLDK 108 (317)
T ss_dssp HHHHHHHHHHHTT-CEEEEECTT---TSCTTHHHHTTCCEEEECCCSGGGTSSHHHHHHHHHTCEESSCCHHHHHHHHCH
T ss_pred HHHHHHHHHHHCC-CEEEEEeCC---CchHHHhhhcCCCEEEEcCCCCCCchHHHHHHHHHcCCCeeCcCHHHHHHHhCH
Confidence 4688888898876 888887732 11111 234678887755443332 244566667776655 678999999999
Q ss_pred HHHHHHHHhCCCCCCcEEEEecCCCccccccccCccceeeecCeeecCcEEEeeccccCcceeEEeccCCCChHHHHHhh
Q 005046 98 RKVYEQLEKYGIPVPRYALVNREVPYQELDYFIEEEDFVEVHGNRFWKPFVEKPVHGDDHSIMIYYPSSAGGGMKELFRK 177 (716)
Q Consensus 98 ~~~lqiL~~~gIP~P~t~~~~r~~~~~~~~~~~e~~d~I~v~G~~~~kPfVeKpv~GedHni~IYyp~~~GgG~~rLfrk 177 (716)
..+.++|+++|||+|++..+.... +..+.+.---..++.|+|+||..|. .|.|+. +
T Consensus 109 ~~~k~~l~~~Gip~p~~~~~~~~~---------~~~~~~~~~~~~~g~PvvvKP~~~~-----------~s~Gv~----~ 164 (317)
T 4eg0_A 109 FRTKLVWQQTGVPTPPFETVMRGD---------DYAARATDIVAKLGLPLFVKPASEG-----------SSVAVL----K 164 (317)
T ss_dssp HHHHHHHHHTTCCCCCEEEEETTS---------CHHHHHHHHHHHHCSCEEEEECC----------------CCE----E
T ss_pred HHHHHHHHHCCcCCCCEEEEECch---------hHHHHHHHHHHhcCCCEEEEeCCCC-----------CCCCEE----E
Confidence 999999999999999999998431 1111110000234589999999985 233332 1
Q ss_pred hCCCccccccccc-ccccCcceEEeeccCCCCceeEEEEECCceeEEEeecCCCCCC--ceeecCCCCcee--eeeeCCH
Q 005046 178 VGNRSSEFHPDVR-RVRREGSYIYEEFMPTGGTDVKVYTVGPEYAHAEARKSPVVDG--VVMRNPDGKEVR--YPVLLTP 252 (716)
Q Consensus 178 ign~sS~~~p~~~-~~r~~gsyIyQEFi~~~G~DIKvytVG~~~vhAe~RKSPv~DG--~vrrN~~gke~r--~pv~Lt~ 252 (716)
+.+... +..-+. ....+..+|+||||+. |.++.|.++|+.+.++..+.+. .+ .++.+.+.++.. .|..|++
T Consensus 165 v~~~~e-l~~a~~~~~~~~~~~lvEe~i~~-G~E~~v~vl~~~~~~~~~i~~~--~~~~~~~~k~~~g~~~~~~P~~l~~ 240 (317)
T 4eg0_A 165 VKTADA-LPAALSEAATHDKIVIVEKSIEG-GGEYTACIAGDLDLPLIKIVPA--GEFYDYHAKYVANDTQYLIPCGLPA 240 (317)
T ss_dssp ECSGGG-HHHHHHHHTTTCSEEEEEECCCS-SEEEEEEEETTCCCCCEEEEC-----------------CEEESSCSSCH
T ss_pred ECCHHH-HHHHHHHHHhCCCeEEEEcCCCC-CcEEEEEEECCcccceEEEeeC--CceechhhcccCCCeeEEcCCCCCH
Confidence 222111 110000 1234678999999987 8999999999987777766542 22 223444444444 3556775
Q ss_pred ----HHHHHHHHHHHHhcCc-eeeEeEEeeC-CCcEEEeccCcccc
Q 005046 253 ----NEKQMAREVCIAFRQA-VCGFDLLRCE-GRSYVCDVNGWSFV 292 (716)
Q Consensus 253 ----eEk~iA~ka~kafgq~-VcGfDLLRs~-g~syV~DVNgwSFV 292 (716)
+-+++|.++++++|.. +|+||++.+. |.+||+|||-.+-.
T Consensus 241 ~~~~~l~~~a~~~~~~lg~~G~~~vD~~~~~~g~~~vlEiN~~pg~ 286 (317)
T 4eg0_A 241 EQETELKRIARRAFDVLGCTDWGRADFMLDAAGNAYFLEVNTAPGM 286 (317)
T ss_dssp HHHHHHHHHHHHHHHTTTCCSEEEEEEEECTTCCEEEEEEESSCCC
T ss_pred HHHHHHHHHHHHHHHHhCCCceEEEEEEEeCCCCEEEEEeeCCCCC
Confidence 4578899999999996 9999999885 56999999965433
No 14
>2fb9_A D-alanine:D-alanine ligase; 1.90A {Thermus caldophilus} PDB: 2zdh_A* 2yzg_A 2yzn_A* 2yzm_A* 2zdg_A* 2zdq_A*
Probab=99.59 E-value=3.9e-15 Score=153.77 Aligned_cols=199 Identities=15% Similarity=0.225 Sum_probs=135.0
Q ss_pred CCcCeeeccccCCCcHH-HHHHHHHhcCCcc-cCCchhhhHhhhHHHHHHHHHhCCCCCCcEEEEecCCCccccccccCc
Q 005046 55 PICDCLIAFYSSGYPLE-KAESYATLRKPFL-VNELEPQHLLHDRRKVYEQLEKYGIPVPRYALVNREVPYQELDYFIEE 132 (716)
Q Consensus 55 P~~D~lIsf~s~gfpl~-kai~y~~lr~p~~-iNdl~~q~~l~DR~~~lqiL~~~gIP~P~t~~~~r~~~~~~~~~~~e~ 132 (716)
..+|++++.+.-.+-.+ .+...++..+... -++..+..+++||..+.++|+++|||+|++..+.+.. .
T Consensus 75 ~~~D~v~~~~hg~~gedg~i~~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gip~p~~~~~~~~~----------~ 144 (322)
T 2fb9_A 75 ERYDVVFPLLHGRFGEDGTVQGFLELLGKPYVGAGVAASALCMDKDLSKRVLAQAGVPVVPWVAVRKGE----------P 144 (322)
T ss_dssp TTCSEEEEECCSTTTTSSHHHHHHHHHTCCBSSCCHHHHHHHHCHHHHHHHHHHTTCCCCCEEEEETTS----------C
T ss_pred cCCCEEEEeCCCCCCccHHHHHHHHHcCCCeeCcCHHHHHHHcCHHHHHHHHHHCCCCCCCEEEEECch----------h
Confidence 46899998764332221 3445566766544 4679999999999999999999999999999987441 1
Q ss_pred cceeeecCeeecCcEEEeeccccCcceeEEeccCCCChHHHHHhhhCCCccccccccc-ccccCcceEEeeccCCCC-ce
Q 005046 133 EDFVEVHGNRFWKPFVEKPVHGDDHSIMIYYPSSAGGGMKELFRKVGNRSSEFHPDVR-RVRREGSYIYEEFMPTGG-TD 210 (716)
Q Consensus 133 ~d~I~v~G~~~~kPfVeKpv~GedHni~IYyp~~~GgG~~rLfrkign~sS~~~p~~~-~~r~~gsyIyQEFi~~~G-~D 210 (716)
+.+ .++.|+|+||..|. .|.|+. ++.+.. ++..-+. ..+.+..+|+||||+ | ++
T Consensus 145 -~~~-----~~g~PvvvKP~~g~-----------~s~Gv~----~v~~~~-el~~a~~~~~~~~~~vlvEe~I~--G~~E 200 (322)
T 2fb9_A 145 -PVV-----PFDPPFFVKPANTG-----------SSVGIS----RVERFQ-DLEAALALAFRYDEKAVVEKALS--PVRE 200 (322)
T ss_dssp -CCC-----CSCSCEEEEETTCC-----------TTTTCE----EESSHH-HHHHHHHHHTTTCSEEEEEECCS--SCEE
T ss_pred -hhh-----ccCCCEEEEeCCCC-----------CCCCEE----EECCHH-HHHHHHHHHHhcCCeEEEEeCCC--CCee
Confidence 111 35689999999985 333432 121111 1111000 122467899999996 7 89
Q ss_pred eEEEEECCc---eeEEEeecCCCCCCc--eeecCCCCce--eeeeeCCH----HHHHHHHHHHHHhcC-ceeeEeEEeeC
Q 005046 211 VKVYTVGPE---YAHAEARKSPVVDGV--VMRNPDGKEV--RYPVLLTP----NEKQMAREVCIAFRQ-AVCGFDLLRCE 278 (716)
Q Consensus 211 IKvytVG~~---~vhAe~RKSPv~DG~--vrrN~~gke~--r~pv~Lt~----eEk~iA~ka~kafgq-~VcGfDLLRs~ 278 (716)
+.|.++|.. +.++..+... .+. +..+.+.|.. ..|..|++ +.+++|.++++++|. .+|+||++.++
T Consensus 201 ~~v~vl~~~~~~~~~~~ei~~~--~~~~~~~~k~~~g~~~~~~Pa~l~~~~~~~i~~~a~~~~~alg~~G~~~vD~~~~~ 278 (322)
T 2fb9_A 201 LEVGVLGNVFGEASPVGEVRYE--APFYDYETKYTPGRAELLIPAPLDPGTQETVQELALKAYKVLGVRGMARVDFFLAE 278 (322)
T ss_dssp EEEEEESSSSCEEEEEEEEEEE--CCEEETTTEEECCEEEEESSCCCCTTHHHHHHHHHHHHHHHHTCCSEEEEEEEEET
T ss_pred EEEEEEeCCCceEeeeEEEeeC--CCccCHHHcccCCCeEEEeCCCCCHHHHHHHHHHHHHHHHHhCCceEEEEEEEEEC
Confidence 999999985 5555444431 121 2223333433 34666776 778899999999999 89999999986
Q ss_pred CCcEEEeccCc
Q 005046 279 GRSYVCDVNGW 289 (716)
Q Consensus 279 g~syV~DVNgw 289 (716)
|++||+|||..
T Consensus 279 g~~~vlEiN~r 289 (322)
T 2fb9_A 279 GELYLNELNTI 289 (322)
T ss_dssp TEEEEEEEESS
T ss_pred CcEEEEEEECC
Confidence 66999999964
No 15
>3se7_A VANA; alpha-beta structure, D-alanine-D-lactate ligase, ligase; HET: ATP; 3.07A {}
Probab=99.58 E-value=4.3e-14 Score=147.16 Aligned_cols=199 Identities=16% Similarity=0.198 Sum_probs=132.3
Q ss_pred CcCeeeccccCCCcH-HHHHHHHHhcCC-cccCCchhhhHhhhHHHHHHHHHhCCCCCCcEEEEecCCCccccccccCcc
Q 005046 56 ICDCLIAFYSSGYPL-EKAESYATLRKP-FLVNELEPQHLLHDRRKVYEQLEKYGIPVPRYALVNREVPYQELDYFIEEE 133 (716)
Q Consensus 56 ~~D~lIsf~s~gfpl-~kai~y~~lr~p-~~iNdl~~q~~l~DR~~~lqiL~~~gIP~P~t~~~~r~~~~~~~~~~~e~~ 133 (716)
.+|++++.+.-.+.. ..+..++++.+. |+-++..+..+++||..+.++|+++|||+|++..+.+.. .
T Consensus 90 ~~D~v~~~lhG~~gedg~iq~~le~~gip~~g~~~~a~~~~~dK~~~k~~l~~~Gip~p~~~~~~~~~-----------~ 158 (346)
T 3se7_A 90 RLDLVLPVLHGKLGEDGAIQGLLELSGIPYVGCDIQSSALCMDKSLTYLVARSAGIATPNFWTVTADE-----------K 158 (346)
T ss_dssp ECSEEEECCCSTTTTSSHHHHHHHHHCCCBSSCCHHHHHHHHSHHHHHHHHHHTTCBCCCEEEEETTS-----------C
T ss_pred CCCEEEEccCCCCCCChHHHHHHHHcCCCeeCcCHHHHHHHhCHHHHHHHHHHcCcCcCCEEEEcCcH-----------H
Confidence 478888877544433 245567777775 555678999999999999999999999999999998441 1
Q ss_pred ceeeecCeeecCcEEEeeccccCcceeEEeccCCCChHHHHHhhhCCCccccccccc-ccccCcceEEeeccCCCCceeE
Q 005046 134 DFVEVHGNRFWKPFVEKPVHGDDHSIMIYYPSSAGGGMKELFRKVGNRSSEFHPDVR-RVRREGSYIYEEFMPTGGTDVK 212 (716)
Q Consensus 134 d~I~v~G~~~~kPfVeKpv~GedHni~IYyp~~~GgG~~rLfrkign~sS~~~p~~~-~~r~~gsyIyQEFi~~~G~DIK 212 (716)
.. -..++.|+|+||..|. .|.|+. ++.+.. ++..-+. ..+.+..+|+||||+ |.++.
T Consensus 159 ~~----~~~lg~PvvvKP~~~~-----------~s~Gv~----~v~~~~-el~~a~~~~~~~~~~vlvEe~I~--G~E~~ 216 (346)
T 3se7_A 159 IP----TDQLTYPVFVKPARSG-----------SSFGVS----KVAREE-DLQGAVEAAREYDSKVLIEEAVI--GTEIG 216 (346)
T ss_dssp CC----TTTCCSSEEEEESSCC-----------TTTTCE----EECSHH-HHHHHHHHHTTTCSEEEEEECCC--SEEEE
T ss_pred HH----HHhcCCCEEEEeCCCC-----------CCcCEE----EECCHH-HHHHHHHHHHhCCCcEEEEeCcC--CEEEE
Confidence 11 1234589999999985 233332 121111 1110000 123467899999998 89999
Q ss_pred EEEECCc---eeEEEeecCCCCCCce-------eecCC--CCceeeeeeCCH----HHHHHHHHHHHHhcC-ceeeEeEE
Q 005046 213 VYTVGPE---YAHAEARKSPVVDGVV-------MRNPD--GKEVRYPVLLTP----NEKQMAREVCIAFRQ-AVCGFDLL 275 (716)
Q Consensus 213 vytVG~~---~vhAe~RKSPv~DG~v-------rrN~~--gke~r~pv~Lt~----eEk~iA~ka~kafgq-~VcGfDLL 275 (716)
|.++|.. .+....+..+ .+.| ....+ +.....|..|++ +-+++|.++++++|. .+++||++
T Consensus 217 v~vl~~~~~~~~~~~~e~~~--~~~~~d~~q~~~~ky~~~~~~~~~pa~l~~~~~~~i~~~a~~~~~~lg~~G~~~vD~~ 294 (346)
T 3se7_A 217 CAVMGNGPELITGEVDQITL--SHGFFKIHQESTPESGSDNSAVTVPADISTTSRSLVQDTAKAVYRALGCRGLSRVDLF 294 (346)
T ss_dssp EEEEEETTEEEECCCEEECC--C--------------CGGGSCEESSCCCCHHHHHHHHHHHHHHHHHHTCCEEEEEEEE
T ss_pred EEEEecCCCeEEEeeEEEec--CCCCcCcccchhccccCCCeeEEeCCCCCHHHHHHHHHHHHHHHHHhCCceEEEEEEE
Confidence 9999874 3333444443 2322 22222 123345777887 667899999999999 69999999
Q ss_pred eeCCC-cEEEeccCc
Q 005046 276 RCEGR-SYVCDVNGW 289 (716)
Q Consensus 276 Rs~g~-syV~DVNgw 289 (716)
.+.++ +||+|||..
T Consensus 295 ~~~~g~~~vlEiN~r 309 (346)
T 3se7_A 295 LTEDGKVVLNEVNTF 309 (346)
T ss_dssp ECTTSCEEEEEEESS
T ss_pred EeCCCCEEEEEEeCC
Confidence 98654 999999954
No 16
>2pvp_A D-alanine-D-alanine ligase; 2.40A {Helicobacter pylori}
Probab=99.57 E-value=1.5e-14 Score=153.43 Aligned_cols=223 Identities=14% Similarity=0.148 Sum_probs=145.5
Q ss_pred CcCeeeccccCCCcHH-HHHHHHHhcCCcc-cCCchhhhHhhhHHHHHHHHHhCCCCCCcEEEEecCCCccccccccCcc
Q 005046 56 ICDCLIAFYSSGYPLE-KAESYATLRKPFL-VNELEPQHLLHDRRKVYEQLEKYGIPVPRYALVNREVPYQELDYFIEEE 133 (716)
Q Consensus 56 ~~D~lIsf~s~gfpl~-kai~y~~lr~p~~-iNdl~~q~~l~DR~~~lqiL~~~gIP~P~t~~~~r~~~~~~~~~~~e~~ 133 (716)
.+|++++...-.+..+ .+...++..+... -|+..+..+++||..+.++|+++|||+|++..+.+.. ..
T Consensus 107 ~~D~v~~~lhg~~gedg~i~~~le~~gip~~G~~~~a~~~~~DK~~~k~~l~~~Gip~p~~~~~~~~~----------~~ 176 (367)
T 2pvp_A 107 ELPLVINLVHGGDGEDGKLASLLEFYRIAFIGPRIEASVLSYNKYLTKLYAKDLGIKTLDYVLLNEKN----------RA 176 (367)
T ss_dssp ECCSEEECCCSTTTTSSHHHHHHHHTTCCEESCCHHHHHHHHSHHHHHHHHHHHTCBCCCCEEECTTT----------GG
T ss_pred CCCEEEEcCCCCCccHHHHHHHHHHcCCCccCCCHHHHHHHcCHHHHHHHHHHCCcCCCCEEEEeCCc----------hH
Confidence 5899998765444442 4555667777544 5889999999999999999999999999999987431 11
Q ss_pred ceeeecCeeecCcEEEeeccccCcceeEEeccCCCChHHHHHhhhCCCccccccccc-ccccCcceEEeeccCCCC-ce-
Q 005046 134 DFVEVHGNRFWKPFVEKPVHGDDHSIMIYYPSSAGGGMKELFRKVGNRSSEFHPDVR-RVRREGSYIYEEFMPTGG-TD- 210 (716)
Q Consensus 134 d~I~v~G~~~~kPfVeKpv~GedHni~IYyp~~~GgG~~rLfrkign~sS~~~p~~~-~~r~~gsyIyQEFi~~~G-~D- 210 (716)
+... -..++.|+|+||..|. .|.|+. ++.+.. ++..-+. ..+.+..+|+||||+ | ++
T Consensus 177 ~~~~--~~~lg~PvvVKP~~g~-----------ss~Gv~----~v~~~~-el~~a~~~~~~~~~~vlVEe~I~--G~~E~ 236 (367)
T 2pvp_A 177 NALD--LMNFNFPFIVKPSNAG-----------SSLGVN----VVKEEK-ELIYALDSAFEYSKEVLIEPFIQ--GVKEY 236 (367)
T ss_dssp GHHH--HCCSCSCEEEEESSCC-----------TTTTCE----EESSTT-SHHHHHHHHTTTCSCEEEEECCT--TCEEE
T ss_pred HHHH--HhccCCCEEEEECCCC-----------CCCCEE----EECCHH-HHHHHHHHHHhcCCcEEEEeCCC--CCcee
Confidence 2211 1235689999999985 344442 222221 1111011 112367899999997 7 89
Q ss_pred --eEEEEECCceeEEEeecCCCCCCc---eeecCCCCc--eeeeeeCCH----HHHHHHHHHHHHhcCc-eeeEeEEeeC
Q 005046 211 --VKVYTVGPEYAHAEARKSPVVDGV---VMRNPDGKE--VRYPVLLTP----NEKQMAREVCIAFRQA-VCGFDLLRCE 278 (716)
Q Consensus 211 --IKvytVG~~~vhAe~RKSPv~DG~---vrrN~~gke--~r~pv~Lt~----eEk~iA~ka~kafgq~-VcGfDLLRs~ 278 (716)
+.|.+ +++.+....+..| ++. ++.+.+.|+ ...|..|++ +-+++|.++++++|.. +|++|++.++
T Consensus 237 svi~v~v-~g~~~~~~~ei~~--~~~~~d~~~ky~~g~~~~~~Pa~l~~~~~~~i~~~a~~~~~aLg~~G~~~vDf~~~~ 313 (367)
T 2pvp_A 237 NLAGCKI-KKDFCFSYIEEPN--KQEFLDFKQKYLDFSRNKAPKASLSNALEEQLKENFKKLYSDLFDGAIIRCDFFVIE 313 (367)
T ss_dssp EEEEEEE-TTEEEEEEEEETT--TTEEECCCCSSCCSCCCSCCCCCCCHHHHHHHHHHHHHHHTTTSTTCCEEEEEEEET
T ss_pred eEEEEEE-CCEEEEEEEEEec--CCceEcccccccCCCeeEEecCCCCHHHHHHHHHHHHHHHHHcCCCCEEEEEEEEEC
Confidence 88888 7774444324444 332 234444343 445777885 4678999999999975 9999999987
Q ss_pred CCcEEEeccCccccccchhhHHHHHHHHHHHHHH
Q 005046 279 GRSYVCDVNGWSFVKNSYKYYDDAACVLRKMFLE 312 (716)
Q Consensus 279 g~syV~DVNgwSFVK~n~kYYddcA~IL~~~~l~ 312 (716)
|++||+|||.-.=.- ....|-+-+.++..++..
T Consensus 314 g~~~vlEiN~rpg~t-~~s~~p~~~~l~~~li~~ 346 (367)
T 2pvp_A 314 NEVYLNEINPIPGSL-ANYLFDDFKTTLENLAQS 346 (367)
T ss_dssp TEEEEEEEESSCGGG-GGGGSSSHHHHHHHHHHH
T ss_pred CeEEEEEEeCCCCCC-cccccCCHHHHHHHHHhC
Confidence 789999999642111 112222445666666554
No 17
>1e4e_A Vancomycin/teicoplanin A-type resistance protein; ligase, cell WALL, antibiotic resistance, membrane, peptidog synthesis; HET: ADP PHY; 2.5A {Enterococcus faecium} SCOP: c.30.1.2 d.142.1.1 PDB: 1e4e_B*
Probab=99.56 E-value=1.8e-14 Score=149.44 Aligned_cols=202 Identities=14% Similarity=0.217 Sum_probs=131.9
Q ss_pred CCcCeeeccccCCCcHH-HHHHHHHhcCC-cccCCchhhhHhhhHHHHHHHHHhCCCCCCcEEEEecCCCccccccccCc
Q 005046 55 PICDCLIAFYSSGYPLE-KAESYATLRKP-FLVNELEPQHLLHDRRKVYEQLEKYGIPVPRYALVNREVPYQELDYFIEE 132 (716)
Q Consensus 55 P~~D~lIsf~s~gfpl~-kai~y~~lr~p-~~iNdl~~q~~l~DR~~~lqiL~~~gIP~P~t~~~~r~~~~~~~~~~~e~ 132 (716)
..+|++++...-.+-.+ .+...++..+. |+-|+..+..+++||..+.++|+++|||+|++..+.+..
T Consensus 89 ~~~D~v~~~~~g~~ged~~~~~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gip~p~~~~~~~~~----------- 157 (343)
T 1e4e_A 89 NHVDVAFSALHGKSGEDGSIQGLFELSGIPFVGCDIQSSAICMDKSLTYIVAKNAGIATPAFWVINKDD----------- 157 (343)
T ss_dssp EECSEEEECCCSTTTTSSHHHHHHHHHTCCBSSCCHHHHHHHHSHHHHHHHHHHTTCBCCCEEEECTTC-----------
T ss_pred ccCCEEEEeCCCCCCcCHHHHHHHHHcCCCccCCCHHHHHHHhCHHHHHHHHHHCCCCcCCEEEEechh-----------
Confidence 35899998764332111 23444556664 455889999999999999999999999999999987431
Q ss_pred cceeeecCeeecCcEEEeeccccCcceeEEeccCCCChHHHHHhhhCCCccccccccc-ccccCcceEEeeccCCCCcee
Q 005046 133 EDFVEVHGNRFWKPFVEKPVHGDDHSIMIYYPSSAGGGMKELFRKVGNRSSEFHPDVR-RVRREGSYIYEEFMPTGGTDV 211 (716)
Q Consensus 133 ~d~I~v~G~~~~kPfVeKpv~GedHni~IYyp~~~GgG~~rLfrkign~sS~~~p~~~-~~r~~gsyIyQEFi~~~G~DI 211 (716)
+ +. . ..++.|+|+||..|. .|.|+. ++.+.. ++..-+. ..+.+..+|+||||+ |.++
T Consensus 158 -~-~~-~-~~~~~PvvvKP~~~~-----------~s~Gv~----~v~~~~-el~~a~~~~~~~~~~~lvEe~I~--G~E~ 215 (343)
T 1e4e_A 158 -R-PV-A-ATFTYPVFVKPARSG-----------SSFGVK----KVNSAD-ELDYAIESARQYDSKILIEQAVS--GCEV 215 (343)
T ss_dssp -C-CC-G-GGSCSCEEEEESSCC-----------TTTTCE----EECSGG-GHHHHHHHHTTTCSSEEEEECCC--SEEE
T ss_pred -h-hh-h-hccCCCEEEEeCCCC-----------CCCCEE----EeCCHH-HHHHHHHHHHhcCCcEEEEeCcC--CeEE
Confidence 1 11 0 345689999999985 333432 122111 1111000 112467899999997 8999
Q ss_pred EEEEECCc----eeEEEeecCCCCCCceeecCC----CCcee--eeeeCCH----HHHHHHHHHHHHhcCc-eeeEeEEe
Q 005046 212 KVYTVGPE----YAHAEARKSPVVDGVVMRNPD----GKEVR--YPVLLTP----NEKQMAREVCIAFRQA-VCGFDLLR 276 (716)
Q Consensus 212 KvytVG~~----~vhAe~RKSPv~DG~vrrN~~----gke~r--~pv~Lt~----eEk~iA~ka~kafgq~-VcGfDLLR 276 (716)
.|.++|.. +.....+...----.++.+.+ .|+.. .|..|++ +-+++|.++++++|.. +|+||++.
T Consensus 216 ~v~vl~~~~~~~~~~~~ei~~~~~~~~~~~k~~~~~~~g~~~~~~p~~l~~~~~~~i~~~a~~~~~alg~~G~~~vD~~~ 295 (343)
T 1e4e_A 216 GCAVLGNSAALVVGEVDQIRLQYGIFRIHQEVEPEKGSENAVITVPADLSAEERGRIQETVKKIYKTLGCRGLARVDMFL 295 (343)
T ss_dssp EEEEEEETTCCEECCCEEEEESSSCCCGGGSSSGGGCCSSEEECSSCSSCHHHHHHHHHHHHHHHHHTTCEEEEEEEEEE
T ss_pred EEEEEeCCCCeEEeeeEEEeeCCCccCHhhcccccCCCCCeeEEeCCCCCHHHHHHHHHHHHHHHHHcCCceEEEEEEEE
Confidence 99999865 223333322100012344554 44433 4555775 6788999999999994 99999999
Q ss_pred eC-CCcEEEeccCc
Q 005046 277 CE-GRSYVCDVNGW 289 (716)
Q Consensus 277 s~-g~syV~DVNgw 289 (716)
+. |.+||+|||..
T Consensus 296 ~~~g~~~viEiN~r 309 (343)
T 1e4e_A 296 QDNGRIVLNEVNTL 309 (343)
T ss_dssp CTTCCEEEEEEESS
T ss_pred eCCCCEEEEEeeCC
Confidence 75 55999999953
No 18
>1ehi_A LMDDL2, D-alanine:D-lactate ligase; ATP-binding. grAsp motif for ATP.; HET: ADP PHY; 2.38A {Leuconostoc mesenteroides} SCOP: c.30.1.2 d.142.1.1
Probab=99.56 E-value=1.1e-14 Score=153.89 Aligned_cols=207 Identities=19% Similarity=0.226 Sum_probs=136.9
Q ss_pred cCCcCeeeccccCCCcHH-HHHHHHHhcCCccc-CCchhhhHhhhHHHHHHHHHhCCCCCCcEEEEecCCCccccccccC
Q 005046 54 WPICDCLIAFYSSGYPLE-KAESYATLRKPFLV-NELEPQHLLHDRRKVYEQLEKYGIPVPRYALVNREVPYQELDYFIE 131 (716)
Q Consensus 54 wP~~D~lIsf~s~gfpl~-kai~y~~lr~p~~i-Ndl~~q~~l~DR~~~lqiL~~~gIP~P~t~~~~r~~~~~~~~~~~e 131 (716)
...+|++++.+.-.+..+ .+...++..+...+ |+..+..+++||..+.++|+++|||+|++..+.+.. +
T Consensus 91 ~~~~D~v~~~~~g~~gedg~~~~lle~~gip~~G~~~~a~~~~~DK~~~k~~l~~~Gip~p~~~~~~~~~---------~ 161 (377)
T 1ehi_A 91 AGDFDIFFPVVHGNLGEDGTLQGLFKLLDKPYVGAPLRGHAVSFDKALTKELLTVNGIRNTKYIVVDPES---------A 161 (377)
T ss_dssp TCCCSEEEEECCSTTTSSSHHHHHHHHTTCCBSSCCHHHHHHHHSHHHHHHHHHTTTCCCCCEEEECTTG---------G
T ss_pred ccCCCEEEEecCCCCCcCHHHHHHHHHcCCCEeCcCHHHHHHHcCHHHHHHHHHHcCCCCCCEEEEeccc---------c
Confidence 346899998874333332 34455677776555 999999999999999999999999999999987431 0
Q ss_pred cc-ceeeecCeeecCcEEEeeccccCcceeEEeccCCCChHHHHHhhhCCCccccccccc-ccccCcceEEeeccCCCC-
Q 005046 132 EE-DFVEVHGNRFWKPFVEKPVHGDDHSIMIYYPSSAGGGMKELFRKVGNRSSEFHPDVR-RVRREGSYIYEEFMPTGG- 208 (716)
Q Consensus 132 ~~-d~I~v~G~~~~kPfVeKpv~GedHni~IYyp~~~GgG~~rLfrkign~sS~~~p~~~-~~r~~gsyIyQEFi~~~G- 208 (716)
.+ ....+ -..++.|+|+||..|. .|.|+. ++.+.. ++..-+. ....+..+|+||||+ |
T Consensus 162 ~~~~~~~~-~~~~g~PvvVKP~~~~-----------~s~Gv~----~v~~~~-el~~a~~~~~~~~~~vlvEe~I~--G~ 222 (377)
T 1ehi_A 162 NNWSWDKI-VAELGNIVFVKAANQG-----------SSVGIS----RVTNAE-EYTEALSDSFQYDYKVLIEEAVN--GA 222 (377)
T ss_dssp GGCCHHHH-HHHHCSCEEEEESSCC-----------TTTTEE----EECSHH-HHHHHHHHHTTTCSCEEEEECCC--CS
T ss_pred chHHHHHH-HHhcCCCEEEEeCCCC-----------CCcCEE----EeCCHH-HHHHHHHHHHhcCCcEEEEcCCC--CC
Confidence 00 01111 1124589999999985 333432 121111 1110000 112356799999996 7
Q ss_pred ceeEEEEECCc---eeEEEeecCCC---CCCce--eecCCCC-ce--eeeeeCCHH----HHHHHHHHHHHhcCc-eeeE
Q 005046 209 TDVKVYTVGPE---YAHAEARKSPV---VDGVV--MRNPDGK-EV--RYPVLLTPN----EKQMAREVCIAFRQA-VCGF 272 (716)
Q Consensus 209 ~DIKvytVG~~---~vhAe~RKSPv---~DG~v--rrN~~gk-e~--r~pv~Lt~e----Ek~iA~ka~kafgq~-VcGf 272 (716)
+++.|.++|+. +.+...+.... ..|.+ +.+.+.| +. ..|..|+++ -+++|.++++++|.. +|+|
T Consensus 223 ~E~~v~vl~~~~~~~~~~~ei~~~~~~~~~~~~d~~~k~~~g~~~~~~~Pa~l~~~~~~~i~~~a~~~~~alg~~G~~~v 302 (377)
T 1ehi_A 223 RELEVGVIGNDQPLVSEIGAHTVPNQGSGDGWYDYNNKFVDNSAVHFQIPAQLSPEVTKEVKQMALDAYKVLNLRGEARM 302 (377)
T ss_dssp CEEEEEEEESSSCEEEEEEEEECTTSSSSSCCCCHHHHTTCCTTCEEESSCCCCHHHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred ceEEEEEEcCCCcEEEeeEEEEecCCCCcCceeCHHhcccCCCCeeEEeCCCCCHHHHHHHHHHHHHHHHHcCCCcEEEE
Confidence 89999999874 66665554410 12322 2333333 33 347778865 477999999999997 9999
Q ss_pred eEEeeC-CCcEEEeccC
Q 005046 273 DLLRCE-GRSYVCDVNG 288 (716)
Q Consensus 273 DLLRs~-g~syV~DVNg 288 (716)
|++.+. |.+||+|||.
T Consensus 303 D~~~~~~g~~~vlEiN~ 319 (377)
T 1ehi_A 303 DFLLDENNVPYLGEPNT 319 (377)
T ss_dssp EEEECTTCCEEEEEEES
T ss_pred EEEEeCCCCEEEEEEeC
Confidence 999985 5699999994
No 19
>2i87_A D-alanine-D-alanine ligase; APO; 2.00A {Staphylococcus aureus subsp} PDB: 2i8c_A* 3n8d_A* 2i80_A*
Probab=99.54 E-value=9e-15 Score=153.05 Aligned_cols=209 Identities=15% Similarity=0.155 Sum_probs=130.0
Q ss_pred CCcCeeeccccCCCcHH-HHHHHHHhcCCcc-cCCchhhhHhhhHHHHHHHHHhCCCCCCcEEEEecCCCccccccccCc
Q 005046 55 PICDCLIAFYSSGYPLE-KAESYATLRKPFL-VNELEPQHLLHDRRKVYEQLEKYGIPVPRYALVNREVPYQELDYFIEE 132 (716)
Q Consensus 55 P~~D~lIsf~s~gfpl~-kai~y~~lr~p~~-iNdl~~q~~l~DR~~~lqiL~~~gIP~P~t~~~~r~~~~~~~~~~~e~ 132 (716)
..+|++++.+...+..+ .+...++..+... -++..+..+++||..+.++|+++|||+|++..+.+...... ..
T Consensus 86 ~~~D~v~~~~~g~~~ed~~~~~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gip~p~~~~~~~~~~~~~-----~~ 160 (364)
T 2i87_A 86 QPYDAVFPLLHGPNGEDGTIQGLFEVLDVPYVGNGVLSAASSMDKLVMKQLFEHRGLPQLPYISFLRSEYEKY-----EH 160 (364)
T ss_dssp SBCSEEEEECCCSSSCTTHHHHHHHHHTCCBSSCCHHHHHHHHSHHHHHHHHHHHTCCCCCEEEEEHHHHHHH-----HH
T ss_pred cCCCEEEEeCCCCCCcCHHHHHHHHHcCCCccCCCHHHHHHHcCHHHHHHHHHHCCCCCCCEEEEechhhccc-----ch
Confidence 45899998763322221 3345556666544 46689999999999999999999999999999874310000 00
Q ss_pred cceeeecCeeecCcEEEeeccccCcceeEEeccCCCChHHHHHhhhCCCccccccccc-ccccCcceEEeeccCCCCcee
Q 005046 133 EDFVEVHGNRFWKPFVEKPVHGDDHSIMIYYPSSAGGGMKELFRKVGNRSSEFHPDVR-RVRREGSYIYEEFMPTGGTDV 211 (716)
Q Consensus 133 ~d~I~v~G~~~~kPfVeKpv~GedHni~IYyp~~~GgG~~rLfrkign~sS~~~p~~~-~~r~~gsyIyQEFi~~~G~DI 211 (716)
++...+ -..++.|+|+||..|. .|.|+. ++.+.. ++..-+. ..+.+..+|+||||+ |+++
T Consensus 161 ~~~~~~-~~~~g~PvvvKP~~g~-----------~s~Gv~----~v~~~~-el~~a~~~~~~~~~~~lvEe~I~--G~E~ 221 (364)
T 2i87_A 161 NILKLV-NDKLNYPVFVKPANLG-----------SSVGIS----KCNNEA-ELKEGIKEAFQFDRKLVIEQGVN--AREI 221 (364)
T ss_dssp HHHHHH-HHHCCSSEEEEESSCS-----------SCTTCE----EESSHH-HHHHHHHHHHTTCSEEEEEECCC--CEEE
T ss_pred hHHHHH-HHhcCCCEEEEeCCCC-----------CCCCEE----EECCHH-HHHHHHHHHHhcCCeEEEEeCcc--CeEE
Confidence 011111 0124589999999985 333432 121111 1110000 112467899999998 8999
Q ss_pred EEEEECCc---eeEEEeecCCCCCC--ceeecCCCCce--eeeeeCCH----HHHHHHHHHHHHhcC-ceeeEeEEeeC-
Q 005046 212 KVYTVGPE---YAHAEARKSPVVDG--VVMRNPDGKEV--RYPVLLTP----NEKQMAREVCIAFRQ-AVCGFDLLRCE- 278 (716)
Q Consensus 212 KvytVG~~---~vhAe~RKSPv~DG--~vrrN~~gke~--r~pv~Lt~----eEk~iA~ka~kafgq-~VcGfDLLRs~- 278 (716)
.|.++|+. +.+...+... .+ .+..+.+.|+. ..|..|++ +.+++|.++++++|. .+++||++.+.
T Consensus 222 ~v~vl~~~~~~~~~~~e~~~~--~~~~~~~~k~~~g~~~~~~pa~l~~~~~~~i~~~a~~~~~alg~~G~~~vD~~~~~~ 299 (364)
T 2i87_A 222 EVAVLGNDYPEATWPGEVVKD--VAFYDYKSKYKDGKVQLQIPADLDEDVQLTLRNMALEAFKATDCSGLVRADFFVTED 299 (364)
T ss_dssp EEEEEESSSCEECCCEEECCS--CCC-----------CCEESSCSSCHHHHHHHHHHHHHHHHHTTCCEEEEEEEEECTT
T ss_pred EEEEEcCCCcEEeeeEEEecC--CCcCCHHHcccCCCeeEEeCCCCCHHHHHHHHHHHHHHHHHcCCCcEEEEEEEEecC
Confidence 99999875 4444444331 22 23344444433 34666876 668899999999999 69999999975
Q ss_pred CCcEEEeccCc
Q 005046 279 GRSYVCDVNGW 289 (716)
Q Consensus 279 g~syV~DVNgw 289 (716)
|.+||+|||.-
T Consensus 300 g~~~viEiN~r 310 (364)
T 2i87_A 300 NQIYINETNAM 310 (364)
T ss_dssp CCEEEEEEESS
T ss_pred CCEEEEEEeCC
Confidence 55999999964
No 20
>3df7_A Putative ATP-grAsp superfamily protein; putative protein, PSI-II, nysgrc., structural genomics, protein structure initiative; 1.87A {Archaeoglobus fulgidus}
Probab=99.51 E-value=6.1e-14 Score=144.71 Aligned_cols=174 Identities=17% Similarity=0.206 Sum_probs=125.7
Q ss_pred cCCcCeeecc-ccCCCcHHHHHHHHHhcCCcccCCchhhhHhhhHHHHHHHHHhCCCCCCcEEEEecCCCccccccccCc
Q 005046 54 WPICDCLIAF-YSSGYPLEKAESYATLRKPFLVNELEPQHLLHDRRKVYEQLEKYGIPVPRYALVNREVPYQELDYFIEE 132 (716)
Q Consensus 54 wP~~D~lIsf-~s~gfpl~kai~y~~lr~p~~iNdl~~q~~l~DR~~~lqiL~~~gIP~P~t~~~~r~~~~~~~~~~~e~ 132 (716)
.+.||+.+.. ++....+...++.++..++++.|+..+..+++||....++|++ |||+|++.+.
T Consensus 67 ~~~~D~~~~i~~~ed~~l~~~~~~l~~~g~~~g~~~~~~~~~~dK~~~~~~l~~-Gip~p~~~~~--------------- 130 (305)
T 3df7_A 67 LEKSDAFLIIAPEDDFLLYTLTKKAEKYCENLGSSSRAIAVTSDKWELYKKLRG-EVQVPQTSLR--------------- 130 (305)
T ss_dssp HTTCSEEEEECCCGGGHHHHHHHHHHTTSEESSCCHHHHHHHTSHHHHHHHHTT-TSCCCCEESS---------------
T ss_pred HHhcCEEEEEccCCcHHHHHHHHHHHhcCCccCCCHHHHHHhcCHHHHHHHHHh-CCCCCCEecc---------------
Confidence 4678874433 2333445677787777788999999999999999999999999 9999999741
Q ss_pred cceeeecCeeecCcEEEeeccccCcceeEEeccCCCChHHHHHhhhCCCcccccccccccccCcceEEeeccCCCCceeE
Q 005046 133 EDFVEVHGNRFWKPFVEKPVHGDDHSIMIYYPSSAGGGMKELFRKVGNRSSEFHPDVRRVRREGSYIYEEFMPTGGTDVK 212 (716)
Q Consensus 133 ~d~I~v~G~~~~kPfVeKpv~GedHni~IYyp~~~GgG~~rLfrkign~sS~~~p~~~~~r~~gsyIyQEFi~~~G~DIK 212 (716)
.++.|+|+||..|. .|.|+. ++.+ .+..+|+||||+ |.++.
T Consensus 131 ---------~~~~P~vvKP~~g~-----------gs~Gv~----~v~~-------------~~~~~lvEe~I~--G~e~s 171 (305)
T 3df7_A 131 ---------PLDCKFIIKPRTAC-----------AGEGIG----FSDE-------------VPDGHIAQEFIE--GINLS 171 (305)
T ss_dssp ---------CCSSSEEEEESSCC---------------CB----CCSS-------------CCTTEEEEECCC--SEEEE
T ss_pred ---------cCCCCEEEEeCCCC-----------CCCCEE----EEec-------------CCCCEEEEeccC--CcEEE
Confidence 12489999999986 344443 2222 367899999999 89999
Q ss_pred EEEECCceeEEEeecCCCCCCceeecCCCCceeeeeeCC----HHHHHHHHHHHHHh-c-CceeeEeEEeeCCCcEEEec
Q 005046 213 VYTVGPEYAHAEARKSPVVDGVVMRNPDGKEVRYPVLLT----PNEKQMAREVCIAF-R-QAVCGFDLLRCEGRSYVCDV 286 (716)
Q Consensus 213 vytVG~~~vhAe~RKSPv~DG~vrrN~~gke~r~pv~Lt----~eEk~iA~ka~kaf-g-q~VcGfDLLRs~g~syV~DV 286 (716)
|.++++..+++..+... +..+..-.+...|..|+ ++-+++|.++++++ | ..++|+|++.+ |++||+||
T Consensus 172 v~v~~g~~~~~~~~~~~-----~~~~~~~~g~~~p~~l~~~~~~~i~~~a~~~~~~l~g~~G~~~vD~~~~-~~~~viEi 245 (305)
T 3df7_A 172 VSLAVGEDVKCLSVNEQ-----IINNFRYAGAVVPARISDEVKREVVEEAVRAVECVEGLNGYVGVDIVYS-DQPYVIEI 245 (305)
T ss_dssp EEEEESSSEEEEEEEEE-----EEETTEEEEEEESCCCCHHHHHHHHHHHHHHHTTSTTCCEEEEEEEEES-SSEEEEEE
T ss_pred EEEEeCCeEEEEEEeeE-----eccCceeccccccCCCCHHHHHHHHHHHHHHHHHcCCCcCceEEEEEEC-CCEEEEEE
Confidence 99997555555443211 11111111223466677 57788999999999 8 46999999996 88999999
Q ss_pred cC
Q 005046 287 NG 288 (716)
Q Consensus 287 Ng 288 (716)
|.
T Consensus 246 Np 247 (305)
T 3df7_A 246 NA 247 (305)
T ss_dssp ES
T ss_pred cC
Confidence 94
No 21
>3i12_A D-alanine-D-alanine ligase A; D-alanyl-alanine synthetase A, ADP binding protein, csgid, A binding, cell shape; HET: ADP; 2.20A {Salmonella typhimurium} PDB: 3q1k_A*
Probab=99.47 E-value=7.2e-13 Score=139.46 Aligned_cols=229 Identities=14% Similarity=0.200 Sum_probs=142.1
Q ss_pred CCcCeeecc-ccCCCcHHHHHHHHHhcCC-cccCCchhhhHhhhHHHHHHHHHhCCCCCCcEEEEecCCCccccccccCc
Q 005046 55 PICDCLIAF-YSSGYPLEKAESYATLRKP-FLVNELEPQHLLHDRRKVYEQLEKYGIPVPRYALVNREVPYQELDYFIEE 132 (716)
Q Consensus 55 P~~D~lIsf-~s~gfpl~kai~y~~lr~p-~~iNdl~~q~~l~DR~~~lqiL~~~gIP~P~t~~~~r~~~~~~~~~~~e~ 132 (716)
..+|++++- |+..---..+...+++.+. |+-++..+..+++||..+.++|+++|||+|++..+.+.... .
T Consensus 97 ~~~D~vf~~lhG~~gEdg~iq~~le~~gip~~G~~~~a~~~~~DK~~~k~~l~~~Gip~p~~~~~~~~~~~--------~ 168 (364)
T 3i12_A 97 PTVDVIFPIVHGTLGEDGSLQGMLRVANLPFVGSDVLSSAACMDKDVAKRLLRDAGLNIAPFITLTRTNRH--------A 168 (364)
T ss_dssp CCCSEEEECCCSTTTTSSHHHHHHHHTTCCBSSCCHHHHHHHHCHHHHHHHHHHTTCCBCCEEEEETTTGG--------G
T ss_pred CCCCEEEEeCCCCCCcCHHHHHHHHHcCCCccCCCHHHHHHHHCHHHHHHHHHHCCCCCCCEEEEEccccc--------h
Confidence 357888877 4432111245667778774 55567899999999999999999999999999999854100 0
Q ss_pred cceeeecCeeecCcEEEeeccccCcceeEEeccCCCChHHHHHhhhCCCccccccccc-ccccCcceEEeeccCCCCcee
Q 005046 133 EDFVEVHGNRFWKPFVEKPVHGDDHSIMIYYPSSAGGGMKELFRKVGNRSSEFHPDVR-RVRREGSYIYEEFMPTGGTDV 211 (716)
Q Consensus 133 ~d~I~v~G~~~~kPfVeKpv~GedHni~IYyp~~~GgG~~rLfrkign~sS~~~p~~~-~~r~~gsyIyQEFi~~~G~DI 211 (716)
.+...+ -..++.|+|+||..|. .|.|+. ++.+.. ++..-+. ..+.+..+|+||||+ |.++
T Consensus 169 ~~~~~~-~~~lg~PvvVKP~~gg-----------ss~Gv~----~v~~~~-el~~a~~~a~~~~~~vlVEe~I~--G~E~ 229 (364)
T 3i12_A 169 FSFAEV-ESRLGLPLFVKPANQG-----------SSVGVS----KVANEA-QYQQAVALAFEFDHKVVVEQGIK--GREI 229 (364)
T ss_dssp CCHHHH-HHHHCSSEEEEETTCC-----------TTTTCE----EESSHH-HHHHHHHHHHHHCSEEEEEECCC--SEEE
T ss_pred hhHHHH-HHhcCCCEEEEECCCC-----------CCcCeE----EeCCHH-HHHHHHHHHHhcCCcEEEEcCcC--CeEE
Confidence 111111 1234589999999985 334432 122111 1111000 123467899999997 7999
Q ss_pred EEEEECCce---eEEEeecCCCCCCceeec---CCC--CceeeeeeCCH----HHHHHHHHHHHHhcC-ceeeEeEEeeC
Q 005046 212 KVYTVGPEY---AHAEARKSPVVDGVVMRN---PDG--KEVRYPVLLTP----NEKQMAREVCIAFRQ-AVCGFDLLRCE 278 (716)
Q Consensus 212 KvytVG~~~---vhAe~RKSPv~DG~vrrN---~~g--ke~r~pv~Lt~----eEk~iA~ka~kafgq-~VcGfDLLRs~ 278 (716)
.|.++|+.. ....... | .++.+..+ .++ .....|..|++ +-+++|.++++++|. .++++|++.+.
T Consensus 230 ~v~vl~~~~~~~~~~~ei~-~-~~~~~~~~~ky~~~~~~~~~~Pa~l~~~~~~~i~~~a~~~~~alg~~G~~~vD~~~~~ 307 (364)
T 3i12_A 230 ECAVLGNDNPQASTCGEIV-L-NSEFYAYDTKYIDDNGAQVVVPAQIPSEVNDKIRAIAIQAYQTLGCAGMARVDVFLTA 307 (364)
T ss_dssp EEEEEESSSCEEEEEEEEE-C-CTTCC--TTTTSGGGGCEEESSCSSCHHHHHHHHHHHHHHHHHTTCCEEEEEEEEECT
T ss_pred EEEEEeCCCceEeeeEEEe-c-CCCccCHHHcccCCCceEEEeCCCCCHHHHHHHHHHHHHHHHHhCCceEEEEEEEEec
Confidence 999998763 2222222 2 13322221 112 23344667776 456789999999999 59999999884
Q ss_pred -CCcEEEeccCc------ccc-----ccchhhHHHHHHHHHHHHHH
Q 005046 279 -GRSYVCDVNGW------SFV-----KNSYKYYDDAACVLRKMFLE 312 (716)
Q Consensus 279 -g~syV~DVNgw------SFV-----K~n~kYYddcA~IL~~~~l~ 312 (716)
|.+||+|||.. |.+ -....|-+-|.+||..-+.+
T Consensus 308 ~g~~~vlEiN~~Pg~t~~s~~p~~~~a~G~~~~~l~~~li~~a~~~ 353 (364)
T 3i12_A 308 DNEVVINEINTLPGFTNISMYPKLWQASGLGYTDLISRLIELALER 353 (364)
T ss_dssp TCCEEEEEEESSCCCSTTCHHHHHHHTTTCCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEeeCCCCCCCCCHHHHHHHHhCcCHHHHHHHHHHHHHHH
Confidence 56999999933 222 12345666666666655543
No 22
>3e5n_A D-alanine-D-alanine ligase A; bacterial blight; 2.00A {Xanthomonas oryzae PV} PDB: 3r5f_A* 3rfc_A*
Probab=99.47 E-value=4.5e-13 Score=142.94 Aligned_cols=229 Identities=14% Similarity=0.224 Sum_probs=142.0
Q ss_pred CCcCeeeccccCCCcHH-HHHHHHHhcC-CcccCCchhhhHhhhHHHHHHHHHhCCCCCCcEEEEecCCCccccccccCc
Q 005046 55 PICDCLIAFYSSGYPLE-KAESYATLRK-PFLVNELEPQHLLHDRRKVYEQLEKYGIPVPRYALVNREVPYQELDYFIEE 132 (716)
Q Consensus 55 P~~D~lIsf~s~gfpl~-kai~y~~lr~-p~~iNdl~~q~~l~DR~~~lqiL~~~gIP~P~t~~~~r~~~~~~~~~~~e~ 132 (716)
..+|++++-..-.+-.+ .+...+++.+ ||+-|+..+..+++||..+.++|+++|||+|++..+.+... ..
T Consensus 116 ~~~D~vf~~lhG~~gEdg~iq~lle~~gipy~G~~~~a~~~~~DK~~~k~~l~~~GIp~p~~~~~~~~~~--------~~ 187 (386)
T 3e5n_A 116 AQIDVVFPIVHGTLGEDGSLQGLLRMANLPFVGSGVLGSAVAMDKDMAKRVLRDARLAVAPFVCFDRHTA--------AH 187 (386)
T ss_dssp CCCSEEEEEECSHHHHSSHHHHHHHHTTCCBSSCCHHHHHHHHBHHHHHHHHHHTTCCBCCEEEEEHHHH--------TT
T ss_pred CCCCEEEEcCCCCCCcCHHHHHHHHHcCCCccCCCHHHHHHHhCHHHHHHHHHHCCCCCCCEEEEeCccc--------ch
Confidence 35788877632111121 4556677777 56678899999999999999999999999999999984310 00
Q ss_pred cceeeecCeeecCcEEEeeccccCcceeEEeccCCCChHHHHHhhhCCCccccccccc-ccccCcceEEeeccCCCCcee
Q 005046 133 EDFVEVHGNRFWKPFVEKPVHGDDHSIMIYYPSSAGGGMKELFRKVGNRSSEFHPDVR-RVRREGSYIYEEFMPTGGTDV 211 (716)
Q Consensus 133 ~d~I~v~G~~~~kPfVeKpv~GedHni~IYyp~~~GgG~~rLfrkign~sS~~~p~~~-~~r~~gsyIyQEFi~~~G~DI 211 (716)
.+...+ -..++.|+|+||..|. .|.|+. ++.+... +..-+. ..+.+..+|+||||+ |+++
T Consensus 188 ~~~~~~-~~~lg~PvvVKP~~gg-----------ss~Gv~----~v~~~~e-l~~a~~~a~~~~~~vlVEe~I~--G~E~ 248 (386)
T 3e5n_A 188 ADVDTL-IAQLGLPLFVKPANQG-----------SSVGVS----QVRTADA-FAAALALALAYDHKVLVEAAVA--GREI 248 (386)
T ss_dssp CCHHHH-HHHHCSSEEEEESBSC-----------SSTTCE----EECSGGG-HHHHHHHHTTTCSEEEEEECCC--SEEE
T ss_pred hhHHHH-HHhcCCCEEEEECCCC-----------cCCCEE----EECCHHH-HHHHHHHHHhCCCcEEEEcCCC--CeEE
Confidence 011111 1234589999999985 344442 2222211 111111 123467899999998 7999
Q ss_pred EEEEECCceeEEE---eecCCCCCC--ceeecC-CC--CceeeeeeCCHH----HHHHHHHHHHHhcCc-eeeEeEEeeC
Q 005046 212 KVYTVGPEYAHAE---ARKSPVVDG--VVMRNP-DG--KEVRYPVLLTPN----EKQMAREVCIAFRQA-VCGFDLLRCE 278 (716)
Q Consensus 212 KvytVG~~~vhAe---~RKSPv~DG--~vrrN~-~g--ke~r~pv~Lt~e----Ek~iA~ka~kafgq~-VcGfDLLRs~ 278 (716)
.|-++|+....+. .+..+ .+ .+.... ++ .....|..|+++ -+++|.++++++|.. ++++|++.+.
T Consensus 249 ~v~vl~~~~~~~~~~gei~~~--~~~~d~~~ky~~~~~~~~~~Pa~l~~~~~~~i~~~a~~~~~aLg~~G~~~vDf~~~~ 326 (386)
T 3e5n_A 249 ECAVLGNAVPHASVCGEVVVH--DAFYSYATKYISEHGAEIVIPADIDAQTQQRIQQIAVQAYQALGCAGMARVDVFLCA 326 (386)
T ss_dssp EEEEECSSSCEEEEEEEECC-------------------CEESSCSSCHHHHHHHHHHHHHHHHHHTCCSEEEEEEEECT
T ss_pred EEEEEeCCCceEEEeEEEEeC--CcccchhcccCCCCCeEEEECCCCCHHHHHHHHHHHHHHHHHhCCccEEEEEEEEEC
Confidence 9999998753332 33321 33 122222 22 334446778774 468999999999997 9999999885
Q ss_pred -CCcEEEeccCcc------cc-----ccchhhHHHHHHHHHHHHHH
Q 005046 279 -GRSYVCDVNGWS------FV-----KNSYKYYDDAACVLRKMFLE 312 (716)
Q Consensus 279 -g~syV~DVNgwS------FV-----K~n~kYYddcA~IL~~~~l~ 312 (716)
|.+||+|||--+ .+ .....|-+-|.+||..-+.+
T Consensus 327 dg~~~vlEiN~~PG~t~~S~~p~~~~~~Gi~~~~li~~li~~a~~r 372 (386)
T 3e5n_A 327 DGRIVINEVNTLPGFTRISVYPKLWQASGLDYRGLITRLIELALER 372 (386)
T ss_dssp TCCEEEEEEESSCCCSTTCHHHHHHHTTTCCHHHHHHHHHHHHHHH
T ss_pred CCcEEEEEeECCCCCCccCHHHHHHHHhCCCHHHHHHHHHHHHHHH
Confidence 459999999432 22 12235656666666655544
No 23
>3k3p_A D-alanine--D-alanine ligase; D-alanyl-alanine synthetase, ATP-binding, cell shape, cell W biogenesis/degradation, magnesium, manganese; 2.23A {Streptococcus mutans}
Probab=99.47 E-value=8.5e-14 Score=148.82 Aligned_cols=262 Identities=13% Similarity=0.172 Sum_probs=155.2
Q ss_pred hhHHHHHHHhhcCCceEEEEeC-c---ceeecCC-------Cccc------------------CCcCeeeccccCCCcH-
Q 005046 21 APMGQILDRLQAFGEFEVIHFG-D---KVILEDP-------IEKW------------------PICDCLIAFYSSGYPL- 70 (716)
Q Consensus 21 kPm~~IL~rL~~~g~feiiiF~-d---~vIL~e~-------ve~w------------------P~~D~lIsf~s~gfpl- 70 (716)
.--++|++-|.+.| ||++.++ + ...+..+ ...| ..+|++++-..-.+-.
T Consensus 56 ~Sa~~v~~al~~~~-~~v~~i~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vf~~lhG~~GEd 134 (383)
T 3k3p_A 56 LSAESVMRAINYDN-FLVKTYFITQAGDFIKTQEFDSQPSETDKLMTNDTIIASQKIKPSDIYEEEAVVFPVLHGPMGED 134 (383)
T ss_dssp HHHHHHHHHSCTTT-EEEEEEEECTTSCEEEEEEESSCCC--CCCCCTTSCCGGGEECGGGGCCTTCEEEEECCSTTTSS
T ss_pred HHHHHHHHHhhhcC-CEEEEEEecCCCCEEecccccccccccccccccccccccccccccccccCCCEEEEcCCCCCcch
Confidence 45678888887655 8887765 2 1221100 0122 1578888766544433
Q ss_pred HHHHHHHHhcC-CcccCCchhhhHhhhHHHHHHHHHhCC-CCCCcEEEEecCCCccccccccCccceeeecCeeecCcEE
Q 005046 71 EKAESYATLRK-PFLVNELEPQHLLHDRRKVYEQLEKYG-IPVPRYALVNREVPYQELDYFIEEEDFVEVHGNRFWKPFV 148 (716)
Q Consensus 71 ~kai~y~~lr~-p~~iNdl~~q~~l~DR~~~lqiL~~~g-IP~P~t~~~~r~~~~~~~~~~~e~~d~I~v~G~~~~kPfV 148 (716)
-.+...+++.+ ||+-|+..+..+++||..+.++|+++| ||+|++..+.+.... .++...+ -..++.|+|
T Consensus 135 g~iq~lle~~gipy~G~~~~a~~~~~DK~~~k~~l~~~G~Ipvp~~~~~~~~~~~--------~~~~~~~-~~~lg~Pvv 205 (383)
T 3k3p_A 135 GSIQGFLEVLKMPYVGTNILSSSVAMDKITTNQVLESATTIPQVAYVALIEGEPL--------ESKLAEV-EEKLIYPVF 205 (383)
T ss_dssp SHHHHHHHHTTCCBSSCCHHHHHHHHCHHHHHHHHHHHCCCCBCCEEEEETTSCH--------HHHHHHH-HHHCCSSEE
T ss_pred HHHHHHHHHcCCCccCCCHHHHHHHhCHHHHHHHHHhCCCcCCCCEEEEeCccch--------hHHHHHH-HHhcCCCEE
Confidence 24566677777 566688999999999999999999999 999999999854100 0011111 123569999
Q ss_pred EeeccccCcceeEEeccCCCChHHHHHhhhCCCccccccccc-ccccCcceEEeeccCCCCceeEEEEECCceeEE---E
Q 005046 149 EKPVHGDDHSIMIYYPSSAGGGMKELFRKVGNRSSEFHPDVR-RVRREGSYIYEEFMPTGGTDVKVYTVGPEYAHA---E 224 (716)
Q Consensus 149 eKpv~GedHni~IYyp~~~GgG~~rLfrkign~sS~~~p~~~-~~r~~gsyIyQEFi~~~G~DIKvytVG~~~vhA---e 224 (716)
+||..|. .|.|+. ++.+.. ++..-+. ..+.+..+|+||||+ |+++.|-++|+....+ .
T Consensus 206 VKP~~gg-----------ss~GV~----~v~~~~-el~~al~~a~~~~~~vlVEe~I~--G~E~~v~vl~d~~~~~~~~~ 267 (383)
T 3k3p_A 206 VKPANMG-----------SSVGIS----KAENRT-DLKQAIALALKYDSRVLIEQGVD--AREIEVGILGNTDVKTTLPG 267 (383)
T ss_dssp EEECC-----------------CE----EESSHH-HHHHHHHHHHHHCSEEEEEECCC--SEEEEEEEEESSSCEECCCE
T ss_pred EEeCCCC-----------CCCCEE----EECCHH-HHHHHHHHHHhCCCeEEEEcCCC--CeEEEEEEEeCCCeeEEeeE
Confidence 9999985 233332 122211 1111000 123467899999998 8999999998754322 2
Q ss_pred eecCCCCCCc--eeecCCCC--ceeeeeeCCHHH----HHHHHHHHHHhcCc-eeeEeEEeeC-CCcEEEeccCccccc-
Q 005046 225 ARKSPVVDGV--VMRNPDGK--EVRYPVLLTPNE----KQMAREVCIAFRQA-VCGFDLLRCE-GRSYVCDVNGWSFVK- 293 (716)
Q Consensus 225 ~RKSPv~DG~--vrrN~~gk--e~r~pv~Lt~eE----k~iA~ka~kafgq~-VcGfDLLRs~-g~syV~DVNgwSFVK- 293 (716)
.+..+ .+. +.+.-+.+ ....|..|+++. +++|.++++++|.. ++++|++.+. |.+||+|||--+=.-
T Consensus 268 ei~~~--~~~~d~~~ky~~g~~~~~~Pa~l~~~~~~~i~~~a~~~~~aLg~~G~~~vDf~~~~~g~~~vlEINtrPG~t~ 345 (383)
T 3k3p_A 268 EIVKD--VAFYDYEAKYIDNKITMAIPAEIDPVIVEKMRDYAATAFRTLGCCGLSRCDFFLTEDGKVYLNELNTMPGFTQ 345 (383)
T ss_dssp EEC-------------------CEESSCCCCHHHHHHHHHHHHHHHHHTTCCEEEEEEEEECTTCCEEEEEEESSCCCC-
T ss_pred EEecC--CCccchhhcccCCCeeEEecCCCCHHHHHHHHHHHHHHHHHcCCceEEEEEEEEECCCCEEEEEeeCCCCCCc
Confidence 22221 221 22222222 233456677654 68999999999997 9999999975 559999999543211
Q ss_pred ----------cchhhHHHHHHHHHHHHHH
Q 005046 294 ----------NSYKYYDDAACVLRKMFLE 312 (716)
Q Consensus 294 ----------~n~kYYddcA~IL~~~~l~ 312 (716)
....|-+-|.+||..-+.+
T Consensus 346 ~S~~p~~~~a~Gi~~~~li~~li~~a~~r 374 (383)
T 3k3p_A 346 WSMYPLLWENMGLSYSVLIEELVSLAKEM 374 (383)
T ss_dssp -CHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHhCCCHHHHHHHHHHHHHHH
Confidence 1234555566666554443
No 24
>3lwb_A D-alanine--D-alanine ligase; DDL, D-alanyl--D-alanine ligase RV2981C, structural genomics, TB structural GENO consortium, TBSGC; 2.10A {Mycobacterium tuberculosis}
Probab=99.43 E-value=8e-13 Score=140.26 Aligned_cols=206 Identities=15% Similarity=0.193 Sum_probs=132.6
Q ss_pred CcCeeeccccCCCcHH-HHHHHHHhcCC-cccCCchhhhHhhhHHHHHHHHHhCCCCCCcEEEEecCCCccccccccCcc
Q 005046 56 ICDCLIAFYSSGYPLE-KAESYATLRKP-FLVNELEPQHLLHDRRKVYEQLEKYGIPVPRYALVNREVPYQELDYFIEEE 133 (716)
Q Consensus 56 ~~D~lIsf~s~gfpl~-kai~y~~lr~p-~~iNdl~~q~~l~DR~~~lqiL~~~gIP~P~t~~~~r~~~~~~~~~~~e~~ 133 (716)
.+|++++-..-.+-.+ .+..++++.+. |+-++..+..++.||..+.++|+++|||+|++..+.+.... ...
T Consensus 109 ~~D~vfp~lhG~~gEdg~iq~lle~~gip~vG~~~~a~~~~~DK~~~k~~l~~~GIp~p~~~~~~~~~~~-------~~~ 181 (373)
T 3lwb_A 109 SVDVVFPVLHGPYGEDGTIQGLLELAGVPYVGAGVLASAVGMDKEFTKKLLAADGLPVGAYAVLRPPRST-------LHR 181 (373)
T ss_dssp TCSEEEECCEETTEECCHHHHHHHHHTCCBSSSCHHHHHHHHBHHHHHHHHHHTTCCBCCEEEECTTCCC-------CCH
T ss_pred CccEEEECCCCCCCccHHHHHHHHHcCCCccCCcHHHHHHHcCHHHHHHHHHHcCcCCCCEEEEECcccc-------hhH
Confidence 5888888774332221 45566777775 55556899999999999999999999999999999854100 000
Q ss_pred ceeeecCeeecCcEEEeeccccCcceeEEeccCCCChHHHHHhhhCCCccccccccc-ccccCcceEEeeccCCCCceeE
Q 005046 134 DFVEVHGNRFWKPFVEKPVHGDDHSIMIYYPSSAGGGMKELFRKVGNRSSEFHPDVR-RVRREGSYIYEEFMPTGGTDVK 212 (716)
Q Consensus 134 d~I~v~G~~~~kPfVeKpv~GedHni~IYyp~~~GgG~~rLfrkign~sS~~~p~~~-~~r~~gsyIyQEFi~~~G~DIK 212 (716)
+. -..++.|+|+||..|. .|.|+. ++.+... +..-+. ..+.+..+|+||||+ |+++.
T Consensus 182 ~~----~~~lg~PvvVKP~~gg-----------ss~GV~----~v~~~~e-L~~a~~~a~~~~~~vlVEe~I~--G~E~~ 239 (373)
T 3lwb_A 182 QE----CERLGLPVFVKPARGG-----------SSIGVS----RVSSWDQ-LPAAVARARRHDPKVIVEAAIS--GRELE 239 (373)
T ss_dssp HH----HHHHCSCEEEEESBCS-----------TTTTCE----EECSGGG-HHHHHHHHHTTCSSEEEEECCE--EEEEE
T ss_pred HH----HHhcCCCEEEEeCCCC-----------CCCCEE----EeCCHHH-HHHHHHHHHhcCCCEEEeCCCC--CeEEE
Confidence 11 2235699999999985 333432 2222211 111011 123467899999998 89999
Q ss_pred EEEECCcee-----EEEeecCCCCCC----c--eeecCCCC--ceeeeeeCCH----HHHHHHHHHHHHhcC-ceeeEeE
Q 005046 213 VYTVGPEYA-----HAEARKSPVVDG----V--VMRNPDGK--EVRYPVLLTP----NEKQMAREVCIAFRQ-AVCGFDL 274 (716)
Q Consensus 213 vytVG~~~v-----hAe~RKSPv~DG----~--vrrN~~gk--e~r~pv~Lt~----eEk~iA~ka~kafgq-~VcGfDL 274 (716)
|-++|.... ....+...-..+ - +..+.+.+ +...|..|++ +-+++|.++++++|. .+++||+
T Consensus 240 v~vl~~~~~~~~~~~~~ei~~~~~~~~~~~~~d~~~ky~~~~~~~~~Pa~l~~~~~~~i~~~a~~~~~aLg~~G~~~vDf 319 (373)
T 3lwb_A 240 CGVLEMPDGTLEASTLGEIRVAGVRGREDSFYDFATKYLDDAAELDVPAKVDDQVAEAIRQLAIRAFAAIDCRGLARVDF 319 (373)
T ss_dssp EEEEECTTSCEEECCCEEEECCSTTCSEESSSCHHHHHTCTTCEEESSCCCCHHHHHHHHHHHHHHHHHTTCCSEEEEEE
T ss_pred EEEEECCCCceEEeeeeEEEccCCCCccccccchhhcccCCCceEEeCCCCCHHHHHHHHHHHHHHHHHhCCccEEEEEE
Confidence 999987632 122222110011 1 11222222 2334677775 567899999999999 5999999
Q ss_pred EeeCCCcEEEeccCcc
Q 005046 275 LRCEGRSYVCDVNGWS 290 (716)
Q Consensus 275 LRs~g~syV~DVNgwS 290 (716)
+.+.+|.||+|||..+
T Consensus 320 ~~~~dg~~vlEIN~~P 335 (373)
T 3lwb_A 320 FLTDDGPVINEINTMP 335 (373)
T ss_dssp EEETTEEEEEEEESSC
T ss_pred EEECCCCEEEEecCCC
Confidence 9987555999999543
No 25
>2pn1_A Carbamoylphosphate synthase large subunit; ZP_00538348.1, ATP-grAsp domain, carbamoylphosphate synthase subunit (split gene in MJ); 2.00A {Exiguobacterium sibiricum}
Probab=99.43 E-value=3.7e-13 Score=137.09 Aligned_cols=191 Identities=17% Similarity=0.187 Sum_probs=121.8
Q ss_pred CcCeeeccccCCCcH-HHHHHHHHhcCC-cccCCchhhhHhhhHHHHHHHHHhCCCCCCcEEEEecCCCccccccccCcc
Q 005046 56 ICDCLIAFYSSGYPL-EKAESYATLRKP-FLVNELEPQHLLHDRRKVYEQLEKYGIPVPRYALVNREVPYQELDYFIEEE 133 (716)
Q Consensus 56 ~~D~lIsf~s~gfpl-~kai~y~~lr~p-~~iNdl~~q~~l~DR~~~lqiL~~~gIP~P~t~~~~r~~~~~~~~~~~e~~ 133 (716)
.+|++|+.+....++ ....+.++..+. ++.|+..+..+++||....++|+++|||+|++.... ++ ..
T Consensus 72 ~~d~vi~~~~~~~~~~a~~~~~l~~~g~~~~~~~~~~~~~~~dK~~~~~~l~~~gip~p~~~~~~-----~~------~~ 140 (331)
T 2pn1_A 72 GVTALLTLIDPELGLLAQATERFQAIGVTVIVSPYAACELCFDKYTMYEYCLRQGIAHARTYATM-----AS------FE 140 (331)
T ss_dssp TCCEEEESSHHHHHHHHHTHHHHHTTTCEECCCCHHHHHHHHBHHHHHHHHHHHTCCCCCEESSH-----HH------HH
T ss_pred CCCEEEeCCchhHHHHHHHHHHHHhCCcEEecCCHHHHHHhhCHHHHHHHHHHcCCCCCcEEecH-----HH------hh
Confidence 478898876544444 344556666664 678999999999999999999999999999986421 11 11
Q ss_pred ceeeecCeeecCcEEEeeccccCcceeEEeccCCCChHHHHHhhhCCCcccccccccccccCcceEEeeccCCCCceeEE
Q 005046 134 DFVEVHGNRFWKPFVEKPVHGDDHSIMIYYPSSAGGGMKELFRKVGNRSSEFHPDVRRVRREGSYIYEEFMPTGGTDVKV 213 (716)
Q Consensus 134 d~I~v~G~~~~kPfVeKpv~GedHni~IYyp~~~GgG~~rLfrkign~sS~~~p~~~~~r~~gsyIyQEFi~~~G~DIKv 213 (716)
+.+ ....++.|+|+||..|. .|.|+. +++... ++.. .++....+|+||||+ |..+.|
T Consensus 141 ~~~--~~~~~~~P~vvKp~~g~-----------g~~gv~-~v~~~~----el~~---~~~~~~~~lvee~i~--G~e~~v 197 (331)
T 2pn1_A 141 EAL--AAGEVQLPVFVKPRNGS-----------ASIEVR-RVETVE----EVEQ---LFSKNTDLIVQELLV--GQELGV 197 (331)
T ss_dssp HHH--HTTSSCSCEEEEESBC------------------------------------------CEEEEECCC--SEEEEE
T ss_pred hhh--hcccCCCCEEEEeCCCC-----------CCCCeE-EeCCHH----HHHH---HHHhCCCeEEEecCC--CcEEEE
Confidence 111 11234589999999996 455654 333221 1211 233456899999998 577777
Q ss_pred EEEC----CceeEEEeecCCCCCCceeecCCCCcee-eeeeCCHHHHHHHHHHHHHhcC-ceeeEeEEeeCCCcEEEecc
Q 005046 214 YTVG----PEYAHAEARKSPVVDGVVMRNPDGKEVR-YPVLLTPNEKQMAREVCIAFRQ-AVCGFDLLRCEGRSYVCDVN 287 (716)
Q Consensus 214 ytVG----~~~vhAe~RKSPv~DG~vrrN~~gke~r-~pv~Lt~eEk~iA~ka~kafgq-~VcGfDLLRs~g~syV~DVN 287 (716)
.+++ ++++++..|.. +. ..+|... .+..+.++-+++|.++++++|. .+++||++...|++||+|||
T Consensus 198 ~~~~d~~~G~~~~~~~~~~------~~--~~~g~~~~~~~~~~~~~~~~~~~~~~~lg~~G~~~vd~~~~~g~~~~iEiN 269 (331)
T 2pn1_A 198 DAYVDLISGKVTSIFIKEK------LT--MRAGETDKSRSVLRDDVFELVEHVLDGSGLVGPLDFDLFDVAGTLYLSEIN 269 (331)
T ss_dssp EEEECTTTCCEEEEEEEEE------EE--EETTEEEEEEEECCHHHHHHHHHHHTTTCCCEEEEEEEEEETTEEEEEEEE
T ss_pred EEEEecCCCeEEEEEEEEE------EE--ecCCceeEeEEeccHHHHHHHHHHHHHhCCcceEEEEEEEcCCCEEEEEEe
Confidence 6665 56665554432 00 0122222 2335789999999999999999 68999999777889999999
Q ss_pred C
Q 005046 288 G 288 (716)
Q Consensus 288 g 288 (716)
.
T Consensus 270 ~ 270 (331)
T 2pn1_A 270 P 270 (331)
T ss_dssp S
T ss_pred C
Confidence 7
No 26
>3tqt_A D-alanine--D-alanine ligase; cell envelope; 1.88A {Coxiella burnetii}
Probab=99.43 E-value=6.3e-13 Score=141.44 Aligned_cols=205 Identities=15% Similarity=0.181 Sum_probs=128.2
Q ss_pred CCcCeeeccccCCCcHH-HHHHHHHhcC-CcccCCchhhhHhhhHHHHHHHHHhCCCCCCcEEEEecCCCccccccccCc
Q 005046 55 PICDCLIAFYSSGYPLE-KAESYATLRK-PFLVNELEPQHLLHDRRKVYEQLEKYGIPVPRYALVNREVPYQELDYFIEE 132 (716)
Q Consensus 55 P~~D~lIsf~s~gfpl~-kai~y~~lr~-p~~iNdl~~q~~l~DR~~~lqiL~~~gIP~P~t~~~~r~~~~~~~~~~~e~ 132 (716)
..+|++++-..-.+-.+ .+..++++.+ ||+-++..+..++.||..+.++|+++|||+|++..+.+... .
T Consensus 97 ~~~D~vf~~lhG~~gEdg~iq~lle~~gipy~G~~~~a~~~~~DK~~~k~~l~~~GIp~p~~~~~~~~~~---------~ 167 (372)
T 3tqt_A 97 YSADCVFPMVHGTQGEDGALQGLLELLNLPYVGANVQSSAVCMEKDLTKTVLRAGGIPVVDWHTLSPRDA---------T 167 (372)
T ss_dssp ECCSEEEECCCSTTTTSSHHHHHHHHTTCCBSSCCHHHHHHHHSHHHHHHHHHHTTCCBCCCEEECTTSC---------C
T ss_pred cCCCEEEEcCCCCCCcCHHHHHHHHHcCCCeeCcCHHHHHHHhCHHHHHHHHHHCCcCCCCEEEEechhh---------h
Confidence 35898888765444343 4667777877 46667899999999999999999999999999999985410 0
Q ss_pred cceeeecCeeecCc-EEEeeccccCcceeEEeccCCCChHHHHHhhhCCCccccccccc-ccccCcceEEeeccCCCCce
Q 005046 133 EDFVEVHGNRFWKP-FVEKPVHGDDHSIMIYYPSSAGGGMKELFRKVGNRSSEFHPDVR-RVRREGSYIYEEFMPTGGTD 210 (716)
Q Consensus 133 ~d~I~v~G~~~~kP-fVeKpv~GedHni~IYyp~~~GgG~~rLfrkign~sS~~~p~~~-~~r~~gsyIyQEFi~~~G~D 210 (716)
+..+.---..++.| +|+||..|. .|.|+. ++.+.. ++..-+. ..+.+..+|+||||+ |++
T Consensus 168 ~~~~~~~~~~lg~P~vvVKP~~gg-----------ss~Gv~----~v~~~~-eL~~a~~~a~~~~~~vlVEe~I~--G~E 229 (372)
T 3tqt_A 168 EGVYQRLLDRWGTSELFVKAVSLG-----------SSVATL----PVKTET-EFTKAVKEVFRYDDRLMVEPRIR--GRE 229 (372)
T ss_dssp TTHHHHHHHHC---CEEEEESSCC-----------SGGGEE----EECSHH-HHHHHHHHHTTTCSCEEEEECCC--SEE
T ss_pred hhHHHHHHHhcCCCeEEEEECCCC-----------CCCCEE----EECCHH-HHHHHHHHHHhcCCCEEEECCCC--CEE
Confidence 11111011235699 999999974 233331 222211 1111000 123467899999998 899
Q ss_pred eEEEEECCceeEE--EeecCCCCCC--ceeecCC-CC--ceeeeeeCCH----HHHHHHHHHHHHhcCc-eeeEeEEeeC
Q 005046 211 VKVYTVGPEYAHA--EARKSPVVDG--VVMRNPD-GK--EVRYPVLLTP----NEKQMAREVCIAFRQA-VCGFDLLRCE 278 (716)
Q Consensus 211 IKvytVG~~~vhA--e~RKSPv~DG--~vrrN~~-gk--e~r~pv~Lt~----eEk~iA~ka~kafgq~-VcGfDLLRs~ 278 (716)
+.|-++|+....+ ..+.-| .++ .++..-+ |+ ....|..|++ +-+++|.++++++|.. +|+||++.+.
T Consensus 230 ~~v~vl~~~~~~~~~~~ei~~-~~~~~d~~~ky~~g~~~~~~~Pa~l~~~~~~~i~~~a~~~~~aLg~~G~~rvDf~~~~ 308 (372)
T 3tqt_A 230 IECAVLGNGAPKASLPGEIIP-HHDYYSYDAKYLDPNGATTTTSVDLSESVTKQIQQIAIDAFKMVHCSGMARVDFFVTP 308 (372)
T ss_dssp EEEEEEESSSCEECCCEEEEC-C---------------CEEESCCCCCHHHHHHHHHHHHHHHHHTTCCEEEEEEEEECT
T ss_pred EEEEEEeCCCceEeeeEEEec-CCCccchhhcccCCCceEEEeCCCCCHHHHHHHHHHHHHHHHHhCCccEEEEEEEEeC
Confidence 9999999873221 111111 122 2223223 22 2334667776 4568999999999997 9999999886
Q ss_pred -CCcEEEecc
Q 005046 279 -GRSYVCDVN 287 (716)
Q Consensus 279 -g~syV~DVN 287 (716)
|.+||+|||
T Consensus 309 dg~~~vlEIN 318 (372)
T 3tqt_A 309 NNKVLVNEIN 318 (372)
T ss_dssp TCCEEEEEEE
T ss_pred CCcEEEEEEE
Confidence 569999999
No 27
>2z04_A Phosphoribosylaminoimidazole carboxylase ATPase subunit; purine nucleotide biosynthetic pathway, structural genomics, NPPSFA; 2.35A {Aquifex aeolicus}
Probab=99.42 E-value=2.2e-12 Score=133.95 Aligned_cols=192 Identities=16% Similarity=0.165 Sum_probs=115.2
Q ss_pred CcCeeeccccCCCcHHHHHHHHHhcCCcccCCchhhhHhhhHHHHHHHHHhCCCCCCcEEEEecCCCccccccccCccce
Q 005046 56 ICDCLIAFYSSGYPLEKAESYATLRKPFLVNELEPQHLLHDRRKVYEQLEKYGIPVPRYALVNREVPYQELDYFIEEEDF 135 (716)
Q Consensus 56 ~~D~lIsf~s~gfpl~kai~y~~lr~p~~iNdl~~q~~l~DR~~~lqiL~~~gIP~P~t~~~~r~~~~~~~~~~~e~~d~ 135 (716)
.+|++++.+.... . ..+++++. +..|+..+..+++||..+.++|+++|||+|++..+. .. +..++
T Consensus 57 ~~d~v~~~~e~~~-~-~~~~~l~~---~~g~~~~~~~~~~dK~~~~~~l~~~gip~p~~~~~~-~~---------~~~~~ 121 (365)
T 2z04_A 57 SCDIITYEFEHIK-D-EVLEKCES---KLIPNPQALYVKKSRIREKLFLKKHGFPVPEFLVIK-RD---------EIIDA 121 (365)
T ss_dssp HCSEEEESSSCCC-H-HHHHHHTT---TBSSCTHHHHHHTCHHHHHHHHHTTTCCCCCEEEC------------------
T ss_pred cCCEEEECCCCCc-H-HHHHHHhh---hcCCCHHHHHHhhCHHHHHHHHHHcCCCCCCEEEEc-HH---------HHHHH
Confidence 5799998775543 3 35666543 889999999999999999999999999999998876 31 11222
Q ss_pred eeecCeeecCcEEEeeccccCcceeEEeccCCCChHHHHHhhhCCCcccccccccccccCcceEEeeccCCCCceeEEEE
Q 005046 136 VEVHGNRFWKPFVEKPVHGDDHSIMIYYPSSAGGGMKELFRKVGNRSSEFHPDVRRVRREGSYIYEEFMPTGGTDVKVYT 215 (716)
Q Consensus 136 I~v~G~~~~kPfVeKpv~GedHni~IYyp~~~GgG~~rLfrkign~sS~~~p~~~~~r~~gsyIyQEFi~~~G~DIKvyt 215 (716)
+. .++.|+|+||..|. | .|.|+. +++........++ ....+..+|+||||+. |.++.|.+
T Consensus 122 ~~----~~~~P~vvKp~~~~------~----~g~Gv~-~v~~~~el~~~~~----~~~~~~~~lvEe~i~~-g~e~sv~~ 181 (365)
T 2z04_A 122 LK----SFKLPVVIKAEKLG------Y----DGKGQY-RIKKLEDANQVVK----NHDKEESFIIEEFVKF-EAEISCIG 181 (365)
T ss_dssp ----------CEEEECC---------------------------------------------CEEEECCCC-SEEEEEEE
T ss_pred HH----hcCCCEEEEEcCCC------c----CCCCeE-EECCHHHHHHHHH----HhccCCCEEEEccCCC-CEEEEEEE
Confidence 22 24589999999984 1 233553 4433222112121 1213578999999985 88999999
Q ss_pred ECC---ceeEE-EeecCCCCCCceeecCCCCceeeeeeCCHHHHHHHHHHHHHhcCc-eeeEeEEeeCC-CcEEEeccCc
Q 005046 216 VGP---EYAHA-EARKSPVVDGVVMRNPDGKEVRYPVLLTPNEKQMAREVCIAFRQA-VCGFDLLRCEG-RSYVCDVNGW 289 (716)
Q Consensus 216 VG~---~~vhA-e~RKSPv~DG~vrrN~~gke~r~pv~Lt~eEk~iA~ka~kafgq~-VcGfDLLRs~g-~syV~DVNgw 289 (716)
+++ ++++. ..++ +.++......-.|..|.++.+++|.++++++|.. ++++|++.+.+ .+||+|||.-
T Consensus 182 ~~d~~G~~~~~~~~~~-------~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~lg~~G~~~vd~~~~~~g~~~~iEiN~R 254 (365)
T 2z04_A 182 VRDREGKTYFYPQPFN-------KHEEGILIYNYVPYAKLKEAEEITKRLMELLDIVGVFTVEFFLLKDGRVLINEFAPR 254 (365)
T ss_dssp EECTTCCEEECCEEEE-------EEETTEEEEEEEEEECCHHHHHHHHHHHHHTTCCEEEEEEEEECTTSCEEEEEEESS
T ss_pred EECCCCCEEEECCEEE-------EEeCCEeEEEECCHhHHHHHHHHHHHHHHHcCCEEEEEEEEEEeCCCcEEEEEeccC
Confidence 862 33321 1111 1122111123456667899999999999999995 99999999865 4999999975
No 28
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*
Probab=99.41 E-value=2.1e-13 Score=142.23 Aligned_cols=196 Identities=17% Similarity=0.243 Sum_probs=128.6
Q ss_pred CcCeeeccccCCCcHHHHHHHHHhcCCcccCCchhhhHhhhHHHHHHHH-HhCCCCCCcEEEEecCCCccccccccCccc
Q 005046 56 ICDCLIAFYSSGYPLEKAESYATLRKPFLVNELEPQHLLHDRRKVYEQL-EKYGIPVPRYALVNREVPYQELDYFIEEED 134 (716)
Q Consensus 56 ~~D~lIsf~s~gfpl~kai~y~~lr~p~~iNdl~~q~~l~DR~~~lqiL-~~~gIP~P~t~~~~r~~~~~~~~~~~e~~d 134 (716)
.+|++++.+.. +...+.+.++..+.++.|+..+..+++||....++| +++|||+|++..+... + +..+
T Consensus 74 ~~d~v~~~~e~--~~~~~~~~l~~~gi~~~~~~~~~~~~~dK~~~~~~l~~~~gip~p~~~~~~~~---~------~~~~ 142 (391)
T 1kjq_A 74 KPHYIVPEIEA--IATDMLIQLEEEGLNVVPCARATKLTMNREGIRRLAAEELQLPTSTYRFADSE---S------LFRE 142 (391)
T ss_dssp CCSEEEECSSC--SCHHHHHHHHHTTCEESSCHHHHHHHHSHHHHHHHHHTTSCCCBCCEEEESSH---H------HHHH
T ss_pred CCCEEEECCCc--CCHHHHHHHHhCCCCcCCCHHHHHHhhCHHHHHHHHHHhCCCCCCCeeeeCCH---H------HHHH
Confidence 68999987753 334566778888877889999999999999999999 7999999999887632 1 1111
Q ss_pred eeeecCeeecCcEEEeeccccCcceeEEeccCCCChHHHHHhhhCCCcccccccccccc-----cCcceEEeeccCCCCc
Q 005046 135 FVEVHGNRFWKPFVEKPVHGDDHSIMIYYPSSAGGGMKELFRKVGNRSSEFHPDVRRVR-----REGSYIYEEFMPTGGT 209 (716)
Q Consensus 135 ~I~v~G~~~~kPfVeKpv~GedHni~IYyp~~~GgG~~rLfrkign~sS~~~p~~~~~r-----~~gsyIyQEFi~~~G~ 209 (716)
++. .++.|+|+||..|. .|.|+. + +.+. .++..-+.... .++.+|+||||+. |.
T Consensus 143 ~~~----~~g~P~vvKp~~g~-----------gg~Gv~-~---v~~~-~el~~~~~~~~~~~~~~~~~~lvEe~i~~-g~ 201 (391)
T 1kjq_A 143 AVA----DIGYPCIVKPVMSS-----------SGKGQT-F---IRSA-EQLAQAWKYAQQGGRAGAGRVIVEGVVKF-DF 201 (391)
T ss_dssp HHH----HHCSSEEEEESCC--------------CCCE-E---ECSG-GGHHHHHHHHHHHSGGGCCCEEEEECCCC-SE
T ss_pred HHH----hcCCCEEEEeCCCC-----------CCCCeE-E---ECCH-HHHHHHHHHHHhhcccCCCCEEEEEecCC-Ce
Confidence 121 24589999999875 333432 1 1111 11110000111 2568999999986 88
Q ss_pred eeEEEEECCc-eeEEEeecCCCCCCceeecCCCCceeeeeeCCH----HHHHHHHHHHHHhcC-ceeeEeEEeeCCCcEE
Q 005046 210 DVKVYTVGPE-YAHAEARKSPVVDGVVMRNPDGKEVRYPVLLTP----NEKQMAREVCIAFRQ-AVCGFDLLRCEGRSYV 283 (716)
Q Consensus 210 DIKvytVG~~-~vhAe~RKSPv~DG~vrrN~~gke~r~pv~Lt~----eEk~iA~ka~kafgq-~VcGfDLLRs~g~syV 283 (716)
++.|.+++.. -++ -.|+. +.++.+.+..+.-.|..|++ +-+++|.++++++|. .++++|++.+.+++||
T Consensus 202 E~sv~~~~~~~g~~----~~~~~-~~~~~~~~~~~~~~p~~l~~~~~~~~~~~a~~~~~~lg~~G~~~ve~~~~~~~~~v 276 (391)
T 1kjq_A 202 EITLLTVSAVDGVH----FCAPV-GHRQEDGDYRESWQPQQMSPLALERAQEIARKVVLALGGYGLFGVELFVCGDEVIF 276 (391)
T ss_dssp EEEEEEEEETTEEE----ECCCE-EEEEETTEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCSSEEEEEEEEEETTEEEE
T ss_pred EEEEEEEEeCCCeE----EccCc-ceEEECCEEEEEEeCCCCCHHHHHHHHHHHHHHHHHcCCeeEEEEEEEEeCCcEEE
Confidence 9999887531 111 11111 12222111112224667886 356789999999998 7999999999889999
Q ss_pred EeccC
Q 005046 284 CDVNG 288 (716)
Q Consensus 284 ~DVNg 288 (716)
+|||.
T Consensus 277 iEiN~ 281 (391)
T 1kjq_A 277 SEVSP 281 (391)
T ss_dssp EEEES
T ss_pred EEEEC
Confidence 99996
No 29
>2dwc_A PH0318, 433AA long hypothetical phosphoribosylglycinamide transferase; purine ribonucleotide biosynthesis; HET: ADP; 1.70A {Pyrococcus horikoshii} PDB: 2czg_A*
Probab=99.40 E-value=4.7e-13 Score=142.47 Aligned_cols=194 Identities=15% Similarity=0.175 Sum_probs=127.3
Q ss_pred CcCeeeccccCCCcHHHHHHHHHhcCCcccCCchhhhHhhhHHHHHHHH-HhCCCCCCcEEEEecCCCccccccccCccc
Q 005046 56 ICDCLIAFYSSGYPLEKAESYATLRKPFLVNELEPQHLLHDRRKVYEQL-EKYGIPVPRYALVNREVPYQELDYFIEEED 134 (716)
Q Consensus 56 ~~D~lIsf~s~gfpl~kai~y~~lr~p~~iNdl~~q~~l~DR~~~lqiL-~~~gIP~P~t~~~~r~~~~~~~~~~~e~~d 134 (716)
.+|++++.+.. +...+.+.++..+.++.|+..+..+++||....++| +++|||+|++..+... + +..+
T Consensus 82 ~~d~V~~~~e~--~~~~~~~~l~~~gi~~~~~~~~~~~~~dK~~~k~~l~~~~gip~p~~~~~~~~---~------~~~~ 150 (433)
T 2dwc_A 82 KPDAIIPEIEA--INLDALFEFEKDGYFVVPNARATWIAMHRERLRETLVKEAKVPTSRYMYATTL---D------ELYE 150 (433)
T ss_dssp CCSEEEECSSC--SCHHHHHHHHHTTCCBSSCHHHHHHHHCHHHHHHHHHHTSCCCCCCEEEESSH---H------HHHH
T ss_pred CCCEEEECccc--CCHHHHHHHHhcCCeeCCCHHHHHHhhCHHHHHHHHHHhcCCCCCCeeEeCCH---H------HHHH
Confidence 68999988753 334566777788877889999999999999999999 8999999999887622 1 1111
Q ss_pred eeeecCeeecCcEEEeeccccCcceeEEeccCCCChHHHHHhhhCCCcccccccccccc-----cCcceEEeeccCCCCc
Q 005046 135 FVEVHGNRFWKPFVEKPVHGDDHSIMIYYPSSAGGGMKELFRKVGNRSSEFHPDVRRVR-----REGSYIYEEFMPTGGT 209 (716)
Q Consensus 135 ~I~v~G~~~~kPfVeKpv~GedHni~IYyp~~~GgG~~rLfrkign~sS~~~p~~~~~r-----~~gsyIyQEFi~~~G~ 209 (716)
++. .++.|+|+||..|. .|-|+. .+.+.. ++..-+.... .++.+|+||||+. |.
T Consensus 151 ~~~----~~g~P~vvKp~~g~-----------gg~Gv~----~v~~~~-el~~~~~~~~~~~~~~~~~~lvEe~i~~-g~ 209 (433)
T 2dwc_A 151 ACE----KIGYPCHTKAIMSS-----------SGKGSY----FVKGPE-DIPKAWEEAKTKARGSAEKIIVEEHIDF-DV 209 (433)
T ss_dssp HHH----HHCSSEEEEECCC-----------------E----EECSGG-GHHHHHHC---------CCEEEEECCCC-SE
T ss_pred HHH----hcCCCEEEEECCCc-----------CCCCeE----EECCHH-HHHHHHHHHHhhcccCCCCEEEEccCCC-Ce
Confidence 121 24589999999875 233332 222111 1110000111 2567999999976 88
Q ss_pred eeEEEEEC-----CceeEEE----eecCCCCCCceeecCCCCceeeeeeCCHH----HHHHHHHHHHHhcC-ceeeEeEE
Q 005046 210 DVKVYTVG-----PEYAHAE----ARKSPVVDGVVMRNPDGKEVRYPVLLTPN----EKQMAREVCIAFRQ-AVCGFDLL 275 (716)
Q Consensus 210 DIKvytVG-----~~~vhAe----~RKSPv~DG~vrrN~~gke~r~pv~Lt~e----Ek~iA~ka~kafgq-~VcGfDLL 275 (716)
++.|.+++ ++.++.. ..+. .+|... +.-.|..|+++ -+++|.++++++|. .++++|++
T Consensus 210 E~sv~~~~~~~~~G~~~~~~~~~~~~~~--~~~~~~------~~~~p~~l~~~~~~~i~~~a~~~~~~lg~~G~~~ve~~ 281 (433)
T 2dwc_A 210 EVTELAVRHFDENGEIVTTFPKPVGHYQ--IDGDYH------ASWQPAEISEKAEREVYRIAKRITDVLGGLGIFGVEMF 281 (433)
T ss_dssp EEEECCEEEECTTSCEEEEEECCEEEEE--SSSSEE------EEEESCCCCHHHHHHHHHHHHHHHHHHCSSEECEEEEE
T ss_pred eEEEEEEecccCCCCEeEEEecccceEE--EcCEEE------EEEcCCCCCHHHHHHHHHHHHHHHHHcCCeeEEEEEEE
Confidence 89888763 3422221 1111 133332 22246678874 47889999999998 79999999
Q ss_pred eeCCCcEEEeccCc
Q 005046 276 RCEGRSYVCDVNGW 289 (716)
Q Consensus 276 Rs~g~syV~DVNgw 289 (716)
.+.+++||+|||.-
T Consensus 282 ~~~~~~~viEiN~R 295 (433)
T 2dwc_A 282 VKGDKVWANEVSPR 295 (433)
T ss_dssp EETTEEEEEEEESS
T ss_pred EeCCcEEEEEEeCC
Confidence 99889999999953
No 30
>2ip4_A PURD, phosphoribosylamine--glycine ligase; GAR synthetase, purine nucleotid structural genomics, NPPSFA; 2.80A {Thermus thermophilus}
Probab=99.40 E-value=2.5e-13 Score=143.90 Aligned_cols=200 Identities=17% Similarity=0.182 Sum_probs=127.3
Q ss_pred CcCeeeccccCCCcH-HHHHHHHHhcCC-cccCCchhhhHhhhHHHHHHHHHhCCCCCCcEEEEecCCCccccccccCcc
Q 005046 56 ICDCLIAFYSSGYPL-EKAESYATLRKP-FLVNELEPQHLLHDRRKVYEQLEKYGIPVPRYALVNREVPYQELDYFIEEE 133 (716)
Q Consensus 56 ~~D~lIsf~s~gfpl-~kai~y~~lr~p-~~iNdl~~q~~l~DR~~~lqiL~~~gIP~P~t~~~~r~~~~~~~~~~~e~~ 133 (716)
.+|++++... .++ ..+.+.++..+. +.-|+..+..+++||....++|+++|||+|++..+... +
T Consensus 61 ~~d~v~~~~E--~~~~~~~~~~l~~~gi~~~g~~~~~~~~~~dK~~~~~~l~~~gip~p~~~~~~~~------------~ 126 (417)
T 2ip4_A 61 GIDLTLVGPE--APLVEGIADAFQARGLLLFGPTQKAAMIEGSKAFAKGLMERYGIPTARYRVFREP------------L 126 (417)
T ss_dssp TCCEEEECSS--HHHHTTHHHHHHHHTCCEESCCHHHHHHHHCHHHHHHHHHHTCCCBCCEEEESSH------------H
T ss_pred CCCEEEECCc--hHHHHHHHHHHHHCCCCEECccHHHHHHHcCHHHHHHHHHHcCCCCCCeeeeCCH------------H
Confidence 4788887533 232 345566666774 44599999999999999999999999999999877622 1
Q ss_pred ceeeecCeeecCcEEEeeccccCcceeEEeccCCCChHHHHHhhhCCCccccccccccc---ccCcceEEeeccCCCCce
Q 005046 134 DFVEVHGNRFWKPFVEKPVHGDDHSIMIYYPSSAGGGMKELFRKVGNRSSEFHPDVRRV---RREGSYIYEEFMPTGGTD 210 (716)
Q Consensus 134 d~I~v~G~~~~kPfVeKpv~GedHni~IYyp~~~GgG~~rLfrkign~sS~~~p~~~~~---r~~gsyIyQEFi~~~G~D 210 (716)
+....- ..++.|+|+||..|. .|.|+. +++.. .++..-+... ..++.+|+||||+ |.+
T Consensus 127 ~~~~~~-~~~~~P~vvKp~~~~-----------gg~Gv~-~v~~~----~el~~~~~~~~~~~~~~~~lvEe~i~--g~E 187 (417)
T 2ip4_A 127 EALAYL-EEVGVPVVVKDSGLA-----------AGKGVT-VAFDL----HQAKQAVANILNRAEGGEVVVEEYLE--GEE 187 (417)
T ss_dssp HHHHHH-HHHCSSEEEECTTSC-----------SSTTCE-EESCH----HHHHHHHHHHTTSSSCCCEEEEECCC--SCE
T ss_pred HHHHHH-HHcCCCEEEEECCCC-----------CCCCEE-EeCCH----HHHHHHHHHHHhhccCCeEEEEECcc--CcE
Confidence 211110 124589999999985 333432 11111 0111000011 1126799999998 889
Q ss_pred eEEEEEC-CceeEEE--eec-CCCCCCceeecCCCCceeeeeeCCHHHH-----HHHHHHHHHh-----c-CceeeEeEE
Q 005046 211 VKVYTVG-PEYAHAE--ARK-SPVVDGVVMRNPDGKEVRYPVLLTPNEK-----QMAREVCIAF-----R-QAVCGFDLL 275 (716)
Q Consensus 211 IKvytVG-~~~vhAe--~RK-SPv~DG~vrrN~~gke~r~pv~Lt~eEk-----~iA~ka~kaf-----g-q~VcGfDLL 275 (716)
+.|.+++ ++.+++. .|. .+..++...-|..+-+.-.|..|+++.. ++|.++++++ + ..+++||++
T Consensus 188 ~sv~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~l~~~~~~~~~~~~~~~~~~~l~~~g~~~~G~~~ve~~ 267 (417)
T 2ip4_A 188 ATVLALTDGETILPLLPSQDHKRLLDGDQGPMTGGMGAVAPYPMDEATLRRVEEEILGPLVRGLRAEGVVYRGVVYAGLM 267 (417)
T ss_dssp EEEEEEESSSCEEECCCBEECCEEETTTEEEECSCSEEEESCCCCHHHHHHHHHHTHHHHHHHHHHTTCCCCEEEEEEEE
T ss_pred EEEEEEEeCCEEEEcchheechhhccCCCCCcCCCCeeeeCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCceEEEEEEEE
Confidence 9998883 3445543 232 2223444444544444556777988643 3477778876 4 356779999
Q ss_pred eeCCCcEEEeccC
Q 005046 276 RCEGRSYVCDVNG 288 (716)
Q Consensus 276 Rs~g~syV~DVNg 288 (716)
.+.+|+||+|||.
T Consensus 268 ~~~~g~~viEiN~ 280 (417)
T 2ip4_A 268 LTREGPKVLEFNA 280 (417)
T ss_dssp ECSSCEEEEEEES
T ss_pred EeCCCeEEEEEec
Confidence 9887799999996
No 31
>3aw8_A PURK, phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp; HET: AMP; 2.60A {Thermus thermophilus}
Probab=99.40 E-value=4.8e-13 Score=139.30 Aligned_cols=195 Identities=17% Similarity=0.146 Sum_probs=128.8
Q ss_pred CcCeeeccccCCCcHHHHHHHHHhcCCcccCCchhhhHhhhHHHHHHHHHhCCCCCCcEEEEecCCCccccccccCccce
Q 005046 56 ICDCLIAFYSSGYPLEKAESYATLRKPFLVNELEPQHLLHDRRKVYEQLEKYGIPVPRYALVNREVPYQELDYFIEEEDF 135 (716)
Q Consensus 56 ~~D~lIsf~s~gfpl~kai~y~~lr~p~~iNdl~~q~~l~DR~~~lqiL~~~gIP~P~t~~~~r~~~~~~~~~~~e~~d~ 135 (716)
.+|++++.+.. ++..++++++..+ +..|+..+..+++||..+.++|+++|||+|++..+... ++.
T Consensus 59 ~~d~v~~~~e~--~~~~~~~~l~~~g-~~g~~~~~~~~~~dK~~~k~~l~~~gip~p~~~~~~~~------------~~~ 123 (369)
T 3aw8_A 59 GLALVTYEFEN--VPVEAARRLEGRL-PLYPPAKALEVAQDRLREKTFFQGLGVPTPPFHPVDGP------------EDL 123 (369)
T ss_dssp TCSEEEECCTT--CCHHHHHHHHHHS-CBSSCHHHHHHHTCHHHHHHHHHHHTCCCCCEEEESSH------------HHH
T ss_pred CCCEEEECCCC--cCHHHHHHHHHcC-CcCCCHHHHHHhcCHHHHHHHHHHCCCCCCCceeeCCH------------HHH
Confidence 58999877754 4466777888888 89999999999999999999999999999999887632 122
Q ss_pred eeecCeeecCcEEEeeccccCcceeEEeccCCCChHHHHHhhhCCCcccccccccccccCcceEEeeccCCCCceeEEEE
Q 005046 136 VEVHGNRFWKPFVEKPVHGDDHSIMIYYPSSAGGGMKELFRKVGNRSSEFHPDVRRVRREGSYIYEEFMPTGGTDVKVYT 215 (716)
Q Consensus 136 I~v~G~~~~kPfVeKpv~GedHni~IYyp~~~GgG~~rLfrkign~sS~~~p~~~~~r~~gsyIyQEFi~~~G~DIKvyt 215 (716)
...- ..++.|+|+||..|. | .|.|+. + +.+.. ++..-+... .+..+|+||||+. |.++.|.+
T Consensus 124 ~~~~-~~~g~P~vvKp~~~~------~----~g~Gv~-~---v~~~~-el~~~~~~~-~~~~~lvEe~i~~-g~e~sv~~ 185 (369)
T 3aw8_A 124 EEGL-KRVGLPALLKTRRGG------Y----DGKGQA-L---VRTEE-EALEALKAL-GGRGLILEGFVPF-DREVSLLA 185 (369)
T ss_dssp HHHH-TTTCSSEEEEECCC----------------EE-E---ECSHH-HHHHHHTTT-CSSSEEEEECCCC-SEEEEEEE
T ss_pred HHHH-HHcCCCEEEEEcCCC------C----CcceEE-E---ECCHH-HHHHHHHhc-CCCcEEEEEcCCC-CEEEEEEE
Confidence 1110 124589999999874 1 122322 1 21111 111000011 1567999999975 88999998
Q ss_pred ECC---ceeEEEeecCCCCCCceeecCCCCceeeeee-CCH----HHHHHHHHHHHHhcCc-eeeEeEEeeCCCcEEEec
Q 005046 216 VGP---EYAHAEARKSPVVDGVVMRNPDGKEVRYPVL-LTP----NEKQMAREVCIAFRQA-VCGFDLLRCEGRSYVCDV 286 (716)
Q Consensus 216 VG~---~~vhAe~RKSPv~DG~vrrN~~gke~r~pv~-Lt~----eEk~iA~ka~kafgq~-VcGfDLLRs~g~syV~DV 286 (716)
++. +++ +..+ ...+.++..+...-.|.. |++ +-+++|.++++++|.. ++++|++.+.|++||+||
T Consensus 186 ~~d~~G~~~-~~~~-----~~~~~~~~~~~~~~~p~~~l~~~~~~~~~~~a~~~~~~lg~~G~~~vd~~~~~~~~~viEi 259 (369)
T 3aw8_A 186 VRGRTGEVA-FYPL-----VENRHWGGILRLSLAPAPGASEALQKKAEAYALRAMEALDYVGVLALEFFQVGEELLFNEM 259 (369)
T ss_dssp EECTTSCEE-ECCC-----EEEEEETTEEEEEEESCTTCCHHHHHHHHHHHHHHHHHHTCCEEEEEEEEEETTEEEEEEE
T ss_pred EECCCCCEE-EECC-----eeeeeeCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCeeEEEEEEEEECCcEEEEEE
Confidence 873 333 2211 112222222222334555 776 4577889999999996 999999998888999999
Q ss_pred cCc
Q 005046 287 NGW 289 (716)
Q Consensus 287 Ngw 289 (716)
|.-
T Consensus 260 N~R 262 (369)
T 3aw8_A 260 APR 262 (369)
T ss_dssp ESS
T ss_pred eCC
Confidence 963
No 32
>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}
Probab=99.39 E-value=2e-12 Score=135.18 Aligned_cols=188 Identities=20% Similarity=0.237 Sum_probs=126.1
Q ss_pred CcCeeeccccCCCcHHHHHHHHHhcCCcccCCchhhhHhhhHHHHHHHHHhCCCCCCcEEEEecCCCccccccccCccce
Q 005046 56 ICDCLIAFYSSGYPLEKAESYATLRKPFLVNELEPQHLLHDRRKVYEQLEKYGIPVPRYALVNREVPYQELDYFIEEEDF 135 (716)
Q Consensus 56 ~~D~lIsf~s~gfpl~kai~y~~lr~p~~iNdl~~q~~l~DR~~~lqiL~~~gIP~P~t~~~~r~~~~~~~~~~~e~~d~ 135 (716)
.+|++++.+.. ++..+.++++..+..+.|+..+..+++||....++|+++|||+|++..+... +++
T Consensus 62 ~~d~v~~~~e~--~~~~~~~~l~~~gi~~~~~~~~~~~~~dK~~~~~~l~~~gip~p~~~~~~~~------------~~~ 127 (380)
T 3ax6_A 62 GSDVTTYDLEH--IDVQTLKKLYNEGYKIHPSPYTLEIIQDKFVQKEFLKKNGIPVPEYKLVKDL------------ESD 127 (380)
T ss_dssp TCSEEEESCSC--SCHHHHHHHHHTTCEESSCHHHHHHHHSHHHHHHHHHHTTCCCCCEEECSSH------------HHH
T ss_pred cCCEEEecccC--CCHHHHHHHHHCCCeECCCHHHHHHhcCHHHHHHHHHHcCCCCCCeEEeCCH------------HHH
Confidence 47888876643 3355677788888657799999999999999999999999999999887622 122
Q ss_pred eeecCeeecCcEEEeeccccCcceeEEeccCCCChHHHHHhhhCCCcccccccccccccCcceEEeeccCCCCceeEEEE
Q 005046 136 VEVHGNRFWKPFVEKPVHGDDHSIMIYYPSSAGGGMKELFRKVGNRSSEFHPDVRRVRREGSYIYEEFMPTGGTDVKVYT 215 (716)
Q Consensus 136 I~v~G~~~~kPfVeKpv~GedHni~IYyp~~~GgG~~rLfrkign~sS~~~p~~~~~r~~gsyIyQEFi~~~G~DIKvyt 215 (716)
+. .++.|+|+||..|. | .|.|+. .+.+.. ++.. .++ ..+|+||||+. |.++.|.+
T Consensus 128 ~~----~~~~P~vvKp~~~~------y----~g~Gv~----~v~~~~-el~~---~~~--~~~lvEe~i~~-g~e~sv~~ 182 (380)
T 3ax6_A 128 VR----EFGFPVVQKARKGG------Y----DGRGVF----IIKNEK-DLEN---AIK--GETYLEEFVEI-EKELAVMV 182 (380)
T ss_dssp HH----TTCSSEEEEESCCC---------------EE----EECSGG-GGGG---CCC--SSEEEEECCCE-EEEEEEEE
T ss_pred HH----hcCCCEEEEecCCC------C----CCCCeE----EECCHH-HHHH---Hhc--CCEEEEeccCC-CeeEEEEE
Confidence 21 24589999999874 0 122332 222221 1111 122 78999999975 89999999
Q ss_pred ECC---ceeE-EEeecC--CCCCCceeecCCCCceeeeeeCCH----HHHHHHHHHHHHhcC-ceeeEeEEeeCC-CcEE
Q 005046 216 VGP---EYAH-AEARKS--PVVDGVVMRNPDGKEVRYPVLLTP----NEKQMAREVCIAFRQ-AVCGFDLLRCEG-RSYV 283 (716)
Q Consensus 216 VG~---~~vh-Ae~RKS--Pv~DG~vrrN~~gke~r~pv~Lt~----eEk~iA~ka~kafgq-~VcGfDLLRs~g-~syV 283 (716)
++. ++.. ...++- + ..|.. ...-.|..|++ +-+++|.++++++|. .++++|++.+.+ .+||
T Consensus 183 ~~~~~G~~~~~~~~~~~~~~-~~~~~------~~~~~p~~l~~~~~~~~~~~a~~~~~~lg~~G~~~vd~~~~~~g~~~v 255 (380)
T 3ax6_A 183 ARNEKGEIACYPVVEMYFDE-DANIC------DTVIAPARIEEKYSKIAREIATSVVEALEGVGIFGIEMFLTKQGEILV 255 (380)
T ss_dssp EECSSCCEEEEEEEEEC---------------CEEEESCSSCHHHHHHHHHHHHHHHHHHTCCEEEEEEEEEETTSCEEE
T ss_pred EECCCCCEEEECCeeeeecc-cCCee------EEEECCCCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEEeCCCcEEE
Confidence 864 3322 111111 1 01211 12234666886 567889999999999 499999999865 5999
Q ss_pred EeccCc
Q 005046 284 CDVNGW 289 (716)
Q Consensus 284 ~DVNgw 289 (716)
+|||.-
T Consensus 256 iEiN~R 261 (380)
T 3ax6_A 256 NEIAPR 261 (380)
T ss_dssp EEEESS
T ss_pred EEecCC
Confidence 999964
No 33
>4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii}
Probab=99.38 E-value=4.3e-13 Score=140.77 Aligned_cols=197 Identities=13% Similarity=0.139 Sum_probs=126.5
Q ss_pred CcCeeeccccCCCcHHHHHHHHHhcCCcccCCchhhhHhhhHHHHHHHHHhCCCCCCcEEEEecCCCccccccccCccce
Q 005046 56 ICDCLIAFYSSGYPLEKAESYATLRKPFLVNELEPQHLLHDRRKVYEQLEKYGIPVPRYALVNREVPYQELDYFIEEEDF 135 (716)
Q Consensus 56 ~~D~lIsf~s~gfpl~kai~y~~lr~p~~iNdl~~q~~l~DR~~~lqiL~~~gIP~P~t~~~~r~~~~~~~~~~~e~~d~ 135 (716)
.+|++++. +.-.++..+.+.++..+. ..|+.++..+++||....++|+++|||+|++..+... ++.
T Consensus 71 ~~d~v~~~-~~~~~~~~~a~~~~~~gl-~g~~~~~~~~~~dK~~~~~~l~~~gip~p~~~~~~~~------------~~~ 136 (403)
T 4dim_A 71 NLDGAATC-CLDTGIVSLARICDKENL-VGLNEEAAIMCGDKYKMKEAFKKYNVNTARHFVVRNE------------NEL 136 (403)
T ss_dssp CCSEEECC-SCSTTHHHHHHHHHHHTC-SSCCHHHHHHHHCHHHHHHHHHHHTCCCCCEECCCSH------------HHH
T ss_pred CCCEEEeC-CcchhHHHHHHHHHHcCc-CCCCHHHHHHHhCHHHHHHHHHHcCCCCCCEEEeCCH------------HHH
Confidence 47999986 333444444455555564 4799999999999999999999999999999877622 122
Q ss_pred eeecCeeecCcEEEeeccccCcceeEEeccCCCChHHHHHhhhCCCccccccccccc---ccCcceEEeeccCCCCceeE
Q 005046 136 VEVHGNRFWKPFVEKPVHGDDHSIMIYYPSSAGGGMKELFRKVGNRSSEFHPDVRRV---RREGSYIYEEFMPTGGTDVK 212 (716)
Q Consensus 136 I~v~G~~~~kPfVeKpv~GedHni~IYyp~~~GgG~~rLfrkign~sS~~~p~~~~~---r~~gsyIyQEFi~~~G~DIK 212 (716)
... -..++.|+|+||..|. .|.|+. + +.+.. ++..-.... ..++.+|+||||+-..-+|.
T Consensus 137 ~~~-~~~~g~P~vvKp~~g~-----------gg~Gv~-~---v~~~~-el~~~~~~~~~~~~~~~~lvEe~i~g~e~sv~ 199 (403)
T 4dim_A 137 KNA-LENLKLPVIVKATDLQ-----------GSKGIY-I---AKKEE-EAIDGFNETMNLTKRDYCIVEEFIEGYEFGAQ 199 (403)
T ss_dssp HHH-HHTSCSSEEEECSCC----------------CE-E---ESSHH-HHHHHHHHHHHHCSSSCCEEEECCCSEEEEEE
T ss_pred HHH-HhcCCCCEEEEECCCC-----------CCCCEE-E---ECCHH-HHHHHHHHHHhcCcCCcEEEEEccCCcEEEEE
Confidence 111 0124599999999985 233332 1 21111 111000011 13577999999996556777
Q ss_pred EEEECCceeEEEeecCCCCCCceeecCC-CC--ceeeeeeCCHHH----HHHHHHHHHHhcCc--eeeEeEEeeCCCcEE
Q 005046 213 VYTVGPEYAHAEARKSPVVDGVVMRNPD-GK--EVRYPVLLTPNE----KQMAREVCIAFRQA--VCGFDLLRCEGRSYV 283 (716)
Q Consensus 213 vytVG~~~vhAe~RKSPv~DG~vrrN~~-gk--e~r~pv~Lt~eE----k~iA~ka~kafgq~--VcGfDLLRs~g~syV 283 (716)
+++.++++...... +.+..+.+ +. +...|..|+++. +++|.++++++|.. +++||++.+.+++||
T Consensus 200 ~~~~~g~~~~~~~~------~~~~~~~~~~~~~~~~~p~~l~~~~~~~l~~~a~~~~~~lg~~gg~~~ve~~~~~~~~~~ 273 (403)
T 4dim_A 200 AFVYKNDVLFVMPH------GDETYMSHTAVPVGHYVPLDVKDDIIEKTKTEVKKAIKALGLNNCAVNVDMILKDNEVYI 273 (403)
T ss_dssp EEEETTEEEEEEEE------EEEEEESSSEEEEEEEESCCSCHHHHHHHHHHHHHHHHHHTCCSEEEEEEEEEETTEEEE
T ss_pred EEEECCEEEEEEEe------cceeccCCCCcceeEEeCCCCCHHHHHHHHHHHHHHHHHcCCCCCcEEEEEEEECCcEEE
Confidence 77777776543311 11111111 11 233567788766 67999999999986 789999999889999
Q ss_pred EeccCc
Q 005046 284 CDVNGW 289 (716)
Q Consensus 284 ~DVNgw 289 (716)
+|||.-
T Consensus 274 iEiN~R 279 (403)
T 4dim_A 274 IELTGR 279 (403)
T ss_dssp EEEESS
T ss_pred EEEcCC
Confidence 999964
No 34
>4fu0_A D-alanine--D-alanine ligase 7; vancomycin resistance, peptidoglycan synthesis, D-Ala:D-Ser ATP-grAsp domain; HET: ADP; 2.35A {Enterococcus faecalis}
Probab=99.38 E-value=4.1e-13 Score=140.80 Aligned_cols=201 Identities=17% Similarity=0.202 Sum_probs=128.9
Q ss_pred CcCeeeccccCCCcH--HHHHHHHHhcC-CcccCCchhhhHhhhHHHHHHHHHhCCCCCCcEEEEecCCCccccccccCc
Q 005046 56 ICDCLIAFYSSGYPL--EKAESYATLRK-PFLVNELEPQHLLHDRRKVYEQLEKYGIPVPRYALVNREVPYQELDYFIEE 132 (716)
Q Consensus 56 ~~D~lIsf~s~gfpl--~kai~y~~lr~-p~~iNdl~~q~~l~DR~~~lqiL~~~gIP~P~t~~~~r~~~~~~~~~~~e~ 132 (716)
.+|++++-.. |+.- -.....+++.+ ||+=.+..+..++.||..+.++|+++|||+|++..+.+.. .
T Consensus 97 ~~D~vf~~l~-G~~gEdg~~q~~le~~gip~~G~~~~a~~~~~DK~~~k~~l~~~Gip~p~~~~~~~~~----------~ 165 (357)
T 4fu0_A 97 KVDLVFPVLH-GKNGEDGTLQGIFELAGIPVVGCDTLSSALCMDKDRAHKLVSLAGISVPKSVTFKRFN----------E 165 (357)
T ss_dssp ECSEEEECCC-SHHHHSSHHHHHHHHTTCCBSSCCHHHHHHHHCHHHHHHHHHHTTCBCCCEEEEEGGG----------H
T ss_pred CCCEEEECCc-CccccCHHHHHHHHHCCCcEECcCHHHHHHHhCHHHHHHHHHHCCCCCCCEEeecCCC----------h
Confidence 3676665422 2211 14556777877 5666899999999999999999999999999999987541 1
Q ss_pred cceeeecCeeecCcEEEeeccccCcceeEEeccCCCChHHHHHhhhCCCccccccccc-ccccCcceEEeeccCCCCcee
Q 005046 133 EDFVEVHGNRFWKPFVEKPVHGDDHSIMIYYPSSAGGGMKELFRKVGNRSSEFHPDVR-RVRREGSYIYEEFMPTGGTDV 211 (716)
Q Consensus 133 ~d~I~v~G~~~~kPfVeKpv~GedHni~IYyp~~~GgG~~rLfrkign~sS~~~p~~~-~~r~~gsyIyQEFi~~~G~DI 211 (716)
+..+.---..++.|+|+||..|. .|.|+. ++.+... +..-+. ....+..++.|+|+. |+.+
T Consensus 166 ~~~~~~~~~~lg~PvvVKP~~gg-----------~s~Gv~----~v~~~~e-l~~~~~~a~~~~~~vlvE~~i~--G~e~ 227 (357)
T 4fu0_A 166 EAAMKEIEANLTYPLFIKPVRAG-----------SSFGIT----KVIEKQE-LDAAIELAFEHDTEVIVEETIN--GFEV 227 (357)
T ss_dssp HHHHHHHHHHCCSSEEEEETTCS-----------SSTTCE----EESSHHH-HHHHHHHHTTTCSEEEEEECCC--SEEE
T ss_pred HHHHHHHHHhcCCCEEEEECCCC-----------CCCceE----EeccHHh-HHHHHHHHhccCCeEEEEEecC--CEEE
Confidence 11111011235699999999985 344442 2222111 111111 234567899999994 8899
Q ss_pred EEEEECCceeEE-----EeecCCCCCCceee----cCCCCceeeeeeCCHHH----HHHHHHHHHHhcC-ceeeEeEEee
Q 005046 212 KVYTVGPEYAHA-----EARKSPVVDGVVMR----NPDGKEVRYPVLLTPNE----KQMAREVCIAFRQ-AVCGFDLLRC 277 (716)
Q Consensus 212 KvytVG~~~vhA-----e~RKSPv~DG~vrr----N~~gke~r~pv~Lt~eE----k~iA~ka~kafgq-~VcGfDLLRs 277 (716)
-|.++|.....+ ..+. .+.++. +....+...|..|+++. +++|.++++++|. .+|+||++.+
T Consensus 228 ~v~vl~~~~~~~~~v~~~~~~----~~~~d~~~k~~~~~~~~~~pa~l~~~~~~~i~~~A~~~~~aLg~~G~~~VDf~~~ 303 (357)
T 4fu0_A 228 GCAVLGIDELIVGRVDEIELS----SGFFDYTEKYTLKSSKIYMPARIDAEAEKRIQEAAVTIYKALGCSGFSRVDMFYT 303 (357)
T ss_dssp EEEEEESSSEEECCCEEEEEC----HHHHTSCSBCSSCCEEEESSCSCCHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEC
T ss_pred EEEEEecCCceEEEEEEEEcc----cccccccccccCCCceEecCCCCCHHHHHHHHHHHHHHHHHhCCcceEEEEEEEe
Confidence 998888764322 1111 111111 11222334567788754 5789999999998 4999999887
Q ss_pred C-CCcEEEeccCc
Q 005046 278 E-GRSYVCDVNGW 289 (716)
Q Consensus 278 ~-g~syV~DVNgw 289 (716)
. |.+||+|||--
T Consensus 304 ~dg~~~vlEvNt~ 316 (357)
T 4fu0_A 304 PSGEIVFNEVNTI 316 (357)
T ss_dssp TTCCEEEEEEESS
T ss_pred CCCCEEEEEEeCC
Confidence 5 55999999954
No 35
>1vkz_A Phosphoribosylamine--glycine ligase; TM1250, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.30A {Thermotoga maritima} SCOP: b.84.2.1 c.30.1.1 d.142.1.2
Probab=99.36 E-value=7.2e-13 Score=141.06 Aligned_cols=238 Identities=17% Similarity=0.148 Sum_probs=138.5
Q ss_pred hhHHHHHHHhhcCCceEEEEeCcc---eeecC--CCccc------CCcCeeeccccCCCcHHHHHHHHHhcCCcccCCch
Q 005046 21 APMGQILDRLQAFGEFEVIHFGDK---VILED--PIEKW------PICDCLIAFYSSGYPLEKAESYATLRKPFLVNELE 89 (716)
Q Consensus 21 kPm~~IL~rL~~~g~feiiiF~d~---vIL~e--~ve~w------P~~D~lIsf~s~gfpl~kai~y~~lr~p~~iNdl~ 89 (716)
--++.|...+.+... +|++..+. ...++ +++.+ -.+|++++..-.+ .+..+.+.+.. +.-|+.+
T Consensus 25 gr~~a~a~~~a~~~g-~v~~~~~np~~~~~d~~id~~~l~~~~~~~~~d~V~~~~E~~-~~a~~~~~l~~---~~g~~~~ 99 (412)
T 1vkz_A 25 GREHAIGWAFAKQGY-EVHFYPGNAGTKRDGTNHPYEGEKTLKAIPEEDIVIPGSEEF-LVEGVSNWRSN---VFGPVKE 99 (412)
T ss_dssp HHHHHHHHHHHHTTC-EEEEEECCTTGGGTSEECCCCTHHHHHTSCSSCEECCSSGGG-TCC-----CTT---BSSCCHH
T ss_pred HHHHHHHHHHHhCCC-CEEEECCChhhhcccccCCHHHHHHHHHHcCCCEEEECCcHH-HHHHHHHHhhh---hhCCCHH
Confidence 345666766644333 88887431 00000 11111 2579999843332 22345554443 6779999
Q ss_pred hhhHhhhHHHHHHHHHhCCCCCCcEEEEecCCCccccccccCccceeeecCeeecCcEEEeecccc-CcceeEEeccCCC
Q 005046 90 PQHLLHDRRKVYEQLEKYGIPVPRYALVNREVPYQELDYFIEEEDFVEVHGNRFWKPFVEKPVHGD-DHSIMIYYPSSAG 168 (716)
Q Consensus 90 ~q~~l~DR~~~lqiL~~~gIP~P~t~~~~r~~~~~~~~~~~e~~d~I~v~G~~~~kPfVeKpv~Ge-dHni~IYyp~~~G 168 (716)
+..+++||..+.++|+++|||+|++..+... ++....- ..++.|+|+||..|. ..++++.....
T Consensus 100 ~~~~~~dK~~~k~~l~~~gip~p~~~~~~~~------------~e~~~~~-~~~g~PvvvKp~~~~gg~Gv~~v~~~~-- 164 (412)
T 1vkz_A 100 VARLEGSKVYAKRFMKKYGIRTARFEVAETP------------EELREKI-KKFSPPYVIKADGLARGKGVLILDSKE-- 164 (412)
T ss_dssp HHHHHHCHHHHHHHHHHTTCCCCCEEEESSH------------HHHHHHH-TTSCSSEEEEESSCCSSCCEEEESSHH--
T ss_pred HHHHhcCHHHHHHHHHHcCCCCCCEEEECCH------------HHHHHHH-HhcCCCEEEEeCCCCCCCCEEEECCHH--
Confidence 9999999999999999999999999877622 1222111 124589999999985 22333322111
Q ss_pred ChHHHHHhhhCCCcccccccccccccCcceEEeeccCCCCceeEEEEEC-CceeEEEe---ecCCCCCCceeecCCCCce
Q 005046 169 GGMKELFRKVGNRSSEFHPDVRRVRREGSYIYEEFMPTGGTDVKVYTVG-PEYAHAEA---RKSPVVDGVVMRNPDGKEV 244 (716)
Q Consensus 169 gG~~rLfrkign~sS~~~p~~~~~r~~gsyIyQEFi~~~G~DIKvytVG-~~~vhAe~---RKSPv~DG~vrrN~~gke~ 244 (716)
-....++.+-+.+..|. ..+.+|+||||+ |..+.|.+++ ++.+.+.. ...+..++...-|+.+-+.
T Consensus 165 -el~~a~~~~~~~~~~~g-------~~~~vlvEe~i~--G~E~sv~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 234 (412)
T 1vkz_A 165 -ETIEKGSKLIIGELIKG-------VKGPVVIDEFLA--GNELSAMAVVNGRNFVILPFVRDYKRLMDGDRGPNTGGMGS 234 (412)
T ss_dssp -HHHHHHHHHHHTSSSTT-------CCSCEEEEECCC--SEEEEEEEEEETTEEEECCCCEECCEEETTTEEEECSCSEE
T ss_pred -HHHHHHHHHHhhccccC-------CCCeEEEEECCc--CcEEEEEEEECCCEEEEeeeeEeeeeccCCCCCCCCCCceE
Confidence 01111221110000111 124899999998 8888888873 33333322 1111123333334433334
Q ss_pred eeeeeCCHHH----HHHHHHHHHHh-----cC-ceeeEeEEeeCCCcEEEeccC
Q 005046 245 RYPVLLTPNE----KQMAREVCIAF-----RQ-AVCGFDLLRCEGRSYVCDVNG 288 (716)
Q Consensus 245 r~pv~Lt~eE----k~iA~ka~kaf-----gq-~VcGfDLLRs~g~syV~DVNg 288 (716)
-.|..|+++. +++|.++++++ +. .++++|++.+.+|+||+|||-
T Consensus 235 ~~P~~l~~~~~~~i~~~a~~~~~~l~~~g~~~~G~~~ve~~~~~~g~~viEiN~ 288 (412)
T 1vkz_A 235 WGPVEIPSDTIKKIEELFDKTLWGVEKEGYAYRGFLYLGLMLHDGDPYILEYNV 288 (412)
T ss_dssp EECCCCCHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEEEEEETTEEEEEEEES
T ss_pred EECCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEEECCCcEEEEEec
Confidence 4677788754 67899999999 44 677899999877799999996
No 36
>2yw2_A Phosphoribosylamine--glycine ligase; glycinamide ribonucleotide synthetase, GAR synthetase, ATP B purine nucleotide biosynthetic pathway; HET: ATP; 1.80A {Aquifex aeolicus} PDB: 2yya_A
Probab=99.34 E-value=7.7e-13 Score=140.22 Aligned_cols=207 Identities=17% Similarity=0.144 Sum_probs=127.1
Q ss_pred CcCeeeccccCCCcH-HHHHHHHHhcCC-cccCCchhhhHhhhHHHHHHHHHhCCCCCCcEEEEecCCCccccccccCcc
Q 005046 56 ICDCLIAFYSSGYPL-EKAESYATLRKP-FLVNELEPQHLLHDRRKVYEQLEKYGIPVPRYALVNREVPYQELDYFIEEE 133 (716)
Q Consensus 56 ~~D~lIsf~s~gfpl-~kai~y~~lr~p-~~iNdl~~q~~l~DR~~~lqiL~~~gIP~P~t~~~~r~~~~~~~~~~~e~~ 133 (716)
.+|++++..- .++ ..+.+.++..+. +.-|+..+..+++||....++|+++|||+|++..+... +
T Consensus 62 ~~d~v~~~~E--~~~~~~~~~~l~~~gi~~~g~~~~~~~~~~dK~~~k~~l~~~gip~p~~~~~~~~------------~ 127 (424)
T 2yw2_A 62 GVDFTIVGPE--APLVEGIVDEFEKRGLKIFGPNKEAAKLEGSKAFAKTFMKKYGIPTARYEVFTDF------------E 127 (424)
T ss_dssp TCSEEEECSH--HHHHTTHHHHHHHTTCCEESCCTTTTHHHHCHHHHHHHHHHTTCCBCCEEEESCH------------H
T ss_pred CCCEEEECCc--hHHHHHHHHHHHHCCCcEECcCHHHHHHHhCHHHHHHHHHHcCCCCCCeEEECCH------------H
Confidence 3688887432 333 345566777774 44599999999999999999999999999999877622 1
Q ss_pred ceeeecCeeecCcEEEeecccc-CcceeEEeccCCCChHHHHHhhhCCCcccccccccccccCcceEEeeccCCCCceeE
Q 005046 134 DFVEVHGNRFWKPFVEKPVHGD-DHSIMIYYPSSAGGGMKELFRKVGNRSSEFHPDVRRVRREGSYIYEEFMPTGGTDVK 212 (716)
Q Consensus 134 d~I~v~G~~~~kPfVeKpv~Ge-dHni~IYyp~~~GgG~~rLfrkign~sS~~~p~~~~~r~~gsyIyQEFi~~~G~DIK 212 (716)
+....- ..++.|+|+||..|. ..++++..... -....++.+.+. +.|. ..+..+|+||||+ |.++.
T Consensus 128 ~~~~~~-~~~~~PvvvKp~~g~gg~Gv~~v~~~~---el~~~~~~~~~~-~~~g------~~~~~~lvEe~i~--g~E~s 194 (424)
T 2yw2_A 128 KAKEYV-EKVGAPIVVKADGLAAGKGAVVCETVE---KAIETLDRFLNK-KIFG------KSSERVVIEEFLE--GEEAS 194 (424)
T ss_dssp HHHHHH-HHHCSSEEEEESSCCTTCSEEEESSHH---HHHHHHHHHHTS-CTTG------GGGSSEEEEECCC--SEEEE
T ss_pred HHHHHH-HHcCCcEEEEeCCCCCCCCEEEECCHH---HHHHHHHHHHhh-hhcc------CCCCeEEEEECCC--CcEEE
Confidence 221110 124589999999875 22333322111 011222222110 1111 0246799999998 77777
Q ss_pred EEEEC-CceeEE--Eeec-CCCCCCceeecCCCCceeeeee-CCHHHH-----HHHHHHHHHh---cC---ceeeEeEEe
Q 005046 213 VYTVG-PEYAHA--EARK-SPVVDGVVMRNPDGKEVRYPVL-LTPNEK-----QMAREVCIAF---RQ---AVCGFDLLR 276 (716)
Q Consensus 213 vytVG-~~~vhA--e~RK-SPv~DG~vrrN~~gke~r~pv~-Lt~eEk-----~iA~ka~kaf---gq---~VcGfDLLR 276 (716)
|.++. ++.+++ +.|. ..+.++...-|+.+-+.-.|.. |+++.. ++|.++++++ |. .++++|++.
T Consensus 195 v~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~l~~~~~~~~~~~~~~~~~~~l~~~g~~~~G~~~ve~~~ 274 (424)
T 2yw2_A 195 YIVMINGDRYVPLPTSQDHKRLLDEDKGPNTGGMGAYSPTPVINEEVEKRIREEIVERVIKGLKEEGIYYRGFLYAGLMI 274 (424)
T ss_dssp EEEEEETTEEEECCCBEECCEEETTTEEEECSCSEEEESCTTSCHHHHHHHHHHTHHHHHHHHHHHTCCCEEEEEEEEEE
T ss_pred EEEEEcCCEEEeecceeeccccccCCCCCCCCCCeeECCCccCCHHHHHHHHHHHHHHHHHHHHHcCCCceeEEEEEEEE
Confidence 76663 334443 3332 2223444333443434445665 888653 5677888887 43 467799999
Q ss_pred eCCCcEEEeccCc
Q 005046 277 CEGRSYVCDVNGW 289 (716)
Q Consensus 277 s~g~syV~DVNgw 289 (716)
+.+|+||+|||.-
T Consensus 275 ~~~g~~viEiN~R 287 (424)
T 2yw2_A 275 TKEGPKVLEFNVR 287 (424)
T ss_dssp ETTEEEEEEEESS
T ss_pred eCCCcEEEEEecC
Confidence 9877999999964
No 37
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=99.32 E-value=1.6e-11 Score=130.30 Aligned_cols=204 Identities=15% Similarity=0.181 Sum_probs=124.7
Q ss_pred cCeeeccccCCCcHHHHHHHHHhcCCcccCCchhhhHhhhHHHHHHHHHhCCCCCCcEEEEecCCCccccccccCcccee
Q 005046 57 CDCLIAFYSSGYPLEKAESYATLRKPFLVNELEPQHLLHDRRKVYEQLEKYGIPVPRYALVNREVPYQELDYFIEEEDFV 136 (716)
Q Consensus 57 ~D~lIsf~s~gfpl~kai~y~~lr~p~~iNdl~~q~~l~DR~~~lqiL~~~gIP~P~t~~~~r~~~~~~~~~~~e~~d~I 136 (716)
+|++|++...+.++...+ .+..+-+ =|+.++..+++||....++|+++|||+|++..+... +|..
T Consensus 76 id~V~~~~e~~~~~~a~l--~e~lglp-g~~~~~~~~~~dK~~~k~~l~~~gip~p~~~~~~~~------------~~~~ 140 (425)
T 3vot_A 76 FDGVMTLFEPALPFTAKA--AEALNLP-GLPFTTMENCRNKNKTRSILQQNGLNTPVFHEFHTL------------ADLE 140 (425)
T ss_dssp CSEEECCCGGGHHHHHHH--HHHTTCS-SCCHHHHHHHHCHHHHHHHHHHTTCCCCCEEEESSG------------GGGT
T ss_pred CCEEEECCchhHHHHHHH--HHHcCCC-CCCHHHHHHhhCHHHHHHHHHHCCCCCCceeccCcH------------HHHH
Confidence 577888766665553322 1233322 368899999999999999999999999999988732 1111
Q ss_pred eecCeeecCcEEEeecccc-CcceeEEeccCCCChHHHHHhhhCCCccccccccc-ccccCcceEEeeccCCCCceeEEE
Q 005046 137 EVHGNRFWKPFVEKPVHGD-DHSIMIYYPSSAGGGMKELFRKVGNRSSEFHPDVR-RVRREGSYIYEEFMPTGGTDVKVY 214 (716)
Q Consensus 137 ~v~G~~~~kPfVeKpv~Ge-dHni~IYyp~~~GgG~~rLfrkign~sS~~~p~~~-~~r~~gsyIyQEFi~~~G~DIKvy 214 (716)
...++.|+|+||..|. ..++++-..... ....++.+...+. .+.. ....+..+|.||||+-.--.|-++
T Consensus 141 ---~~~~g~P~vvKp~~g~gs~Gv~~v~~~~e---l~~a~~~~~~~~~---~~~~~~~~~~~~~lvEe~i~G~e~sv~~~ 211 (425)
T 3vot_A 141 ---NRKLSYPLVVKPVNGFSSQGVVRVDDRKE---LEEAVRKVEAVNQ---RDLNRFVHGKTGIVAEQFIDGPEFAIETL 211 (425)
T ss_dssp ---TCCCCSSEEEEESCC-----CEEECSHHH---HHHHHHHHHHHTT---SSHHHHHTTCCCEEEEECCCSCEEEEEEE
T ss_pred ---HhhcCCcEEEEECCCCCCCCceEechHHH---HHHHHHHHHhhhh---hhhhhhccCCCcEEEEEEecCcEEEEEEE
Confidence 1345699999999985 122222221110 1122222211100 0000 112467799999997544456667
Q ss_pred EECCceeE-EEeecCCCCCCceeecCCCCceeeeeeCCHHH----HHHHHHHHHHhcC--ceeeEeEEeeCCC-cEEEec
Q 005046 215 TVGPEYAH-AEARKSPVVDGVVMRNPDGKEVRYPVLLTPNE----KQMAREVCIAFRQ--AVCGFDLLRCEGR-SYVCDV 286 (716)
Q Consensus 215 tVG~~~vh-Ae~RKSPv~DG~vrrN~~gke~r~pv~Lt~eE----k~iA~ka~kafgq--~VcGfDLLRs~g~-syV~DV 286 (716)
+.+++... +..++-. ..|. +....+...|..|+++. .++|.++++++|. .++.+|++.+.+| +||+||
T Consensus 212 ~~~g~~~~~~~~~~~~-~~~~---~~~~~~~~~Pa~l~~~~~~~i~~~~~~~~~alg~~~G~~~ve~~~~~dG~~~~iEi 287 (425)
T 3vot_A 212 SIQGNVHVLSIGYKGN-SKGP---FFEEGVYIAPAQLKEETRLAIVKEVTGAVSALGIHQGPAHTELRLDKDGTPYVIEV 287 (425)
T ss_dssp EETTEEEEEEEEEEEC-CCCS---BCCCCEEEESCCCCHHHHHHHHHHHHHHHHHTTCCSEEEEEEEEECTTCCEEEEEE
T ss_pred EeCCcEEEEeEEEEec-cCCC---ccccceEeecccCCHHHHHHHHHHHHHHHHHcCCCcceEEEEEEEEeCCcEEEEEE
Confidence 76766533 3333332 1222 12234445688888864 4678999999997 4999999988654 999999
Q ss_pred cC
Q 005046 287 NG 288 (716)
Q Consensus 287 Ng 288 (716)
|.
T Consensus 288 N~ 289 (425)
T 3vot_A 288 GA 289 (425)
T ss_dssp ES
T ss_pred ec
Confidence 96
No 38
>2yrx_A Phosphoribosylglycinamide synthetase; glycinamide ribonucleotide synthetase, GAR synthetase; HET: AMP; 1.90A {Geobacillus kaustophilus} PDB: 2yrw_A* 2ys6_A* 2ys7_A
Probab=99.32 E-value=8.5e-13 Score=141.87 Aligned_cols=206 Identities=17% Similarity=0.145 Sum_probs=124.6
Q ss_pred CcCeeeccccCCCcH-HHHHHHHHhcCCccc-CCchhhhHhhhHHHHHHHHHhCCCCCCcEEEEecCCCccccccccCcc
Q 005046 56 ICDCLIAFYSSGYPL-EKAESYATLRKPFLV-NELEPQHLLHDRRKVYEQLEKYGIPVPRYALVNREVPYQELDYFIEEE 133 (716)
Q Consensus 56 ~~D~lIsf~s~gfpl-~kai~y~~lr~p~~i-Ndl~~q~~l~DR~~~lqiL~~~gIP~P~t~~~~r~~~~~~~~~~~e~~ 133 (716)
.+|++++.+. .++ ..+.+.++..+..++ ++..+..+++||....++|+++|||+|++..+... + +..
T Consensus 83 ~~d~vi~~~E--~~~~~~~~~~l~~~gi~~~g~~~~~~~~~~dK~~~k~~l~~~gip~p~~~~~~~~---~------~~~ 151 (451)
T 2yrx_A 83 AIDLTIVGPE--APLASGIVDRFMAEGLRIFGPSQRAALIEGSKAFAKELMKKYGIPTADHAAFTSY---E------EAK 151 (451)
T ss_dssp TCSEEEECSH--HHHHTTHHHHHHHTTCCEESCCHHHHHHHHCHHHHHHHHHHTTCCBCCEEEESCH---H------HHH
T ss_pred CCCEEEECCc--hHHHHHHHHHHHHCCCCEeCccHHHHHHhhCHHHHHHHHHHcCCCCCCeEEECCH---H------HHH
Confidence 4788887433 232 345666777775444 89999999999999999999999999999887622 1 111
Q ss_pred ceeeecCeeecCcEEEeecccc-CcceeEEeccCCCChHHHHHhhhCCCcccccccccccccCcceEEeeccCCCCceeE
Q 005046 134 DFVEVHGNRFWKPFVEKPVHGD-DHSIMIYYPSSAGGGMKELFRKVGNRSSEFHPDVRRVRREGSYIYEEFMPTGGTDVK 212 (716)
Q Consensus 134 d~I~v~G~~~~kPfVeKpv~Ge-dHni~IYyp~~~GgG~~rLfrkign~sS~~~p~~~~~r~~gsyIyQEFi~~~G~DIK 212 (716)
+++. .++.|+|+||..|. ..++++..... -....++.+-+. +.|. ..+..+|+||||+ |.++.
T Consensus 152 ~~~~----~~~~PvVvKp~~~~gg~Gv~~v~~~~---el~~~~~~~~~~-~~~g------~~~~~~lvEe~i~--G~E~s 215 (451)
T 2yrx_A 152 AYIE----QKGAPIVIKADGLAAGKGVTVAQTVE---EALAAAKAALVD-GQFG------TAGSQVVIEEYLE--GEEFS 215 (451)
T ss_dssp HHHH----HHCSSEEEEECC----CCEEEESSHH---HHHHHHHHHHHH-SCCB------TTBCCEEEEECCC--SEEEE
T ss_pred HHHH----hcCCcEEEEeCCCCCCCcEEEECCHH---HHHHHHHHHHhc-cccC------CCCCeEEEEECCc--CcEEE
Confidence 1221 24589999999985 12222222110 011112211100 0011 0246799999999 78888
Q ss_pred EEEE-CCceeEEE--eec-CCCCCCceeecCCCCceeeeee-CCHHHH-----HHHHHHHHHh---cC---ceeeEeEEe
Q 005046 213 VYTV-GPEYAHAE--ARK-SPVVDGVVMRNPDGKEVRYPVL-LTPNEK-----QMAREVCIAF---RQ---AVCGFDLLR 276 (716)
Q Consensus 213 vytV-G~~~vhAe--~RK-SPv~DG~vrrN~~gke~r~pv~-Lt~eEk-----~iA~ka~kaf---gq---~VcGfDLLR 276 (716)
|.++ .++.+.+. .|. ..+.++...-|..+.+.-.|.. |+++.. ++|.++++++ |. .+++||++.
T Consensus 216 v~~~~dG~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~l~~~~~~~~~~~~~~~~~~~l~~~g~~~~G~~~ve~~~ 295 (451)
T 2yrx_A 216 FMAFVNGEKVYPLAIAQDHKRAYDGDEGPNTGGMGAYSPVPQISDEMMDAALEAILRPAAKALAAEGRPFLGVLYAGLMA 295 (451)
T ss_dssp EEEEEETTEEEECCCBEECCEEETTTEEEECSCSEEEESCTTSCHHHHHHHHHHTHHHHHHHHHHTTCCCEEEEEEEEEE
T ss_pred EEEEEcCCEEEEeeeEEeccccccCCCCCCCCCCeEEccCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCceeEEEEEEEE
Confidence 8776 33444443 221 2223444333444444445665 888653 3567777776 43 467789999
Q ss_pred eCCCcEEEeccC
Q 005046 277 CEGRSYVCDVNG 288 (716)
Q Consensus 277 s~g~syV~DVNg 288 (716)
+.+|+||+|||.
T Consensus 296 ~~~g~~viEiN~ 307 (451)
T 2yrx_A 296 TANGPKVIEFNA 307 (451)
T ss_dssp ETTEEEEEEEES
T ss_pred eCCCcEEEEEec
Confidence 987899999994
No 39
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=99.31 E-value=1.8e-11 Score=129.00 Aligned_cols=235 Identities=17% Similarity=0.217 Sum_probs=147.2
Q ss_pred EEEEeecCCccCChhHHHHHHHhhcCCceEEEEeCcc-----------eeecCC-----C-cccCCcCeeeccccCCCcH
Q 005046 8 TIGVCVMEKKVFSAPMGQILDRLQAFGEFEVIHFGDK-----------VILEDP-----I-EKWPICDCLIAFYSSGYPL 70 (716)
Q Consensus 8 ~iGVCaM~~Ka~SkPm~~IL~rL~~~g~feiiiF~d~-----------vIL~e~-----v-e~wP~~D~lIsf~s~gfpl 70 (716)
+|||.--.. --+.+...+.+.| ++++++... .+.... + +-...||++...+ ...+.
T Consensus 16 ~IlIlG~G~-----~g~~la~aa~~~G-~~vi~~d~~~~~~~~~~ad~~~~~~~~d~~~l~~~~~~~dvI~~~~-e~~~~ 88 (389)
T 3q2o_A 16 TIGIIGGGQ-----LGRMMALAAKEMG-YKIAVLDPTKNSPCAQVADIEIVASYDDLKAIQHLAEISDVVTYEF-ENIDY 88 (389)
T ss_dssp EEEEECCSH-----HHHHHHHHHHHTT-CEEEEEESSTTCTTTTTCSEEEECCTTCHHHHHHHHHTCSEEEESC-CCCCH
T ss_pred EEEEECCCH-----HHHHHHHHHHHcC-CEEEEEeCCCCCchHHhCCceEecCcCCHHHHHHHHHhCCEeeecc-ccccH
Confidence 566654332 2455666666666 777777521 111000 0 1123478764433 33444
Q ss_pred HHHHHHHHhcCCcccCCchhhhHhhhHHHHHHHHHhCCCCCCcEEEEecCCCccccccccCccceeeecCeeecCcEEEe
Q 005046 71 EKAESYATLRKPFLVNELEPQHLLHDRRKVYEQLEKYGIPVPRYALVNREVPYQELDYFIEEEDFVEVHGNRFWKPFVEK 150 (716)
Q Consensus 71 ~kai~y~~lr~p~~iNdl~~q~~l~DR~~~lqiL~~~gIP~P~t~~~~r~~~~~~~~~~~e~~d~I~v~G~~~~kPfVeK 150 (716)
.++++++..+. +.|+.++..+++||....++|+++|||+|++..+... ++.... -..++.|+|+|
T Consensus 89 -~~~~~l~~~g~-~~~~~~~~~~~~dK~~~k~~l~~~Gip~p~~~~~~~~------------~~~~~~-~~~~g~P~vvK 153 (389)
T 3q2o_A 89 -RCLQWLEKHAY-LPQGSQLLSKTQNRFTEKNAIEKAGLPVATYRLVQNQ------------EQLTEA-IAELSYPSVLK 153 (389)
T ss_dssp -HHHHHHHHHSC-CTTCSHHHHHTTSHHHHHHHHHHTTCCCCCEEEESSH------------HHHHHH-HHHHCSSEEEE
T ss_pred -HHHHHHHhhCc-cCCCHHHHHHhcCHHHHHHHHHHCCCCCCCeEEECCH------------HHHHHH-HHhcCCCEEEE
Confidence 45666777776 7799999999999999999999999999999988732 122111 11345999999
Q ss_pred ecccc-C-cceeEEeccCCCChHHHHHhhhCCCcccccccccccccCcceEEeeccCCCCceeEEEEECC---ceeE-EE
Q 005046 151 PVHGD-D-HSIMIYYPSSAGGGMKELFRKVGNRSSEFHPDVRRVRREGSYIYEEFMPTGGTDVKVYTVGP---EYAH-AE 224 (716)
Q Consensus 151 pv~Ge-d-Hni~IYyp~~~GgG~~rLfrkign~sS~~~p~~~~~r~~gsyIyQEFi~~~G~DIKvytVG~---~~vh-Ae 224 (716)
|..|. + .++++...... ....++.. .++.+|+||||+ ++.++.|.++++ +++. ..
T Consensus 154 p~~~~~~g~Gv~~v~~~~e---l~~~~~~~---------------~~~~~lvEe~i~-g~~E~~v~~~~~~~G~~~~~~~ 214 (389)
T 3q2o_A 154 TTTGGYDGKGQVVLRSEAD---VDEARKLA---------------NAAECILEKWVP-FEKEVSVIVIRSVSGETKVFPV 214 (389)
T ss_dssp ESSCCSSSCCEEEESSGGG---HHHHHHHH---------------HHSCEEEEECCC-CSEEEEEEEEECTTCCEEECCC
T ss_pred eCCCCCCCCCeEEECCHHH---HHHHHHhc---------------CCCCEEEEeccc-CceEEEEEEEEcCCCCEEEecC
Confidence 99983 2 55555443321 12222211 146799999998 358999999864 2211 11
Q ss_pred eecCCCCCCceeecCCCCceeeeeeCCHH----HHHHHHHHHHHhcCc-eeeEeEEeeCC-CcEEEeccCcc
Q 005046 225 ARKSPVVDGVVMRNPDGKEVRYPVLLTPN----EKQMAREVCIAFRQA-VCGFDLLRCEG-RSYVCDVNGWS 290 (716)
Q Consensus 225 ~RKSPv~DG~vrrN~~gke~r~pv~Lt~e----Ek~iA~ka~kafgq~-VcGfDLLRs~g-~syV~DVNgwS 290 (716)
.+.-+ .+|.+ .+...|..|+++ -+++|.++++++|.. ++++|++.+.+ .+||+|||--.
T Consensus 215 ~e~~~-~~g~~------~~~~~p~~l~~~~~~~~~~~a~~~~~~lg~~G~~~ve~~~~~dg~~~viEiNpR~ 279 (389)
T 3q2o_A 215 AENIH-VNNIL------HESIVPARITEELSQKAIAYAKVLADELELVGTLAVEMFATADGEIYINELAPRP 279 (389)
T ss_dssp EEEEE-ETTEE------EEEEESCSSCHHHHHHHHHHHHHHHHHTTCCEEEEEEEEECTTSCEEEEEEESSC
T ss_pred eeeEE-cCCce------EEEECCCCCCHHHHHHHHHHHHHHHHHcCCeeEEEEEEEEeCCCCEEEEEeeCCC
Confidence 11100 13332 123345667764 467899999999996 99999999854 59999999653
No 40
>2xcl_A Phosphoribosylamine--glycine ligase; GAR-SYN, ATP-grAsp, metal binding; HET: ANP; 2.10A {Bacillus subtilis} PDB: 2xd4_A*
Probab=99.30 E-value=5.8e-13 Score=141.05 Aligned_cols=207 Identities=16% Similarity=0.162 Sum_probs=125.7
Q ss_pred CcCeeeccccCCCcH-HHHHHHHHhcCCccc-CCchhhhHhhhHHHHHHHHHhCCCCCCcEEEEecCCCccccccccCcc
Q 005046 56 ICDCLIAFYSSGYPL-EKAESYATLRKPFLV-NELEPQHLLHDRRKVYEQLEKYGIPVPRYALVNREVPYQELDYFIEEE 133 (716)
Q Consensus 56 ~~D~lIsf~s~gfpl-~kai~y~~lr~p~~i-Ndl~~q~~l~DR~~~lqiL~~~gIP~P~t~~~~r~~~~~~~~~~~e~~ 133 (716)
.+|++++.+. .++ ..+.+.++..+..++ |+..+..+++||....++|+++|||+|++..+... + +..
T Consensus 62 ~~d~v~~~~E--~~~~~~~~~~l~~~gi~~~g~~~~~~~~~~dK~~~k~~l~~~gip~p~~~~~~~~---~------~~~ 130 (422)
T 2xcl_A 62 QVGLTIVGPE--VPLIEGLVDEFEKAGLHVFGPSKAAAIIEGSKQFAKDLMKKYDIPTAEYETFTSF---D------EAK 130 (422)
T ss_dssp TEEEEEECSH--HHHHTTHHHHHHHTTCCEESCCTTTTHHHHCHHHHHHHHHHTTCCBCCEEEESCH---H------HHH
T ss_pred CCCEEEECCc--HHHHHHHHHHHHHCCCCEECcCHHHHHHhcCHHHHHHHHHHcCCCCCCeEEECCH---H------HHH
Confidence 3677777433 232 455666777775444 99999999999999999999999999999887622 1 111
Q ss_pred ceeeecCeeecCcEEEeecccc-CcceeEEeccCCCChHHHHHhhhCCCcccccccccccccCcceEEeeccCCCCceeE
Q 005046 134 DFVEVHGNRFWKPFVEKPVHGD-DHSIMIYYPSSAGGGMKELFRKVGNRSSEFHPDVRRVRREGSYIYEEFMPTGGTDVK 212 (716)
Q Consensus 134 d~I~v~G~~~~kPfVeKpv~Ge-dHni~IYyp~~~GgG~~rLfrkign~sS~~~p~~~~~r~~gsyIyQEFi~~~G~DIK 212 (716)
+++. .++.|+|+||..|. ..++++..... -....++.+-+. +.|. ..+..+|+||||+ |.++.
T Consensus 131 ~~~~----~~~~P~vvKp~~~~~g~Gv~~v~~~~---el~~~~~~~~~~-~~~g------~~~~~~lvEe~i~--g~E~s 194 (422)
T 2xcl_A 131 AYVQ----EKGAPIVIKADGLAAGKGVTVAMTEE---EAIACLHDFLED-EKFG------DASASVVIEEYLS--GEEFS 194 (422)
T ss_dssp HHHH----HHCSSEEEEESSCGGGTCEEEESSHH---HHHHHHHHHHTS-CTTG------GGGSSEEEEECCC--SEEEE
T ss_pred HHHH----hcCCCEEEEeCCCCCCCcEEEECCHH---HHHHHHHHHHhh-hhcc------CCCCeEEEEECCc--CcEEE
Confidence 1221 24589999999985 22333332111 111222222110 1111 0246799999998 88898
Q ss_pred EEEEC-CceeEE--Eeec-CCCCCCceeecCCCCceeeeee-CCHHHH-----HHHHHHHHHh---cC---ceeeEeEEe
Q 005046 213 VYTVG-PEYAHA--EARK-SPVVDGVVMRNPDGKEVRYPVL-LTPNEK-----QMAREVCIAF---RQ---AVCGFDLLR 276 (716)
Q Consensus 213 vytVG-~~~vhA--e~RK-SPv~DG~vrrN~~gke~r~pv~-Lt~eEk-----~iA~ka~kaf---gq---~VcGfDLLR 276 (716)
|.++. ++.+++ +.|. ..+.++...-|..|-+.-.|.. |+++.. ++|.++++++ |. .+++||++.
T Consensus 195 v~~~~dG~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~l~~~~~~~~~~~~~~~~~~~l~~~g~~~~G~~~vd~~~ 274 (422)
T 2xcl_A 195 LMAFVKGEKVYPMVIAQDHKRAFDGDKGPNTGGMGAYSPVPQISEETVRHAVETIVKPAAKAMVQEGRSFTGVLYAGLML 274 (422)
T ss_dssp EEEEEETTEEEECCCBEEEEEEEGGGEEEEEEEEEEEESCTTSCHHHHHHHHHHTHHHHHHHHHHTTCCCEEEEEEEEEE
T ss_pred EEEEEcCCEEEecceeeeeehhcCCCCCCCCCCCeeEccCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEeeEEE
Confidence 88773 333443 2221 1122333333333333445665 888643 3677788776 44 457789999
Q ss_pred eCCCcEEEeccCc
Q 005046 277 CEGRSYVCDVNGW 289 (716)
Q Consensus 277 s~g~syV~DVNgw 289 (716)
+.+|+||+|||.-
T Consensus 275 ~~~g~~viEiN~R 287 (422)
T 2xcl_A 275 TENGSKVIEFNAR 287 (422)
T ss_dssp ETTEEEEEEEESS
T ss_pred eCCCcEEEEEecC
Confidence 9878999999953
No 41
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=99.29 E-value=1.7e-11 Score=127.42 Aligned_cols=176 Identities=15% Similarity=0.203 Sum_probs=124.8
Q ss_pred CcCeeeccccCCCcHHHHHHHHHhcCCcccCCchhhhHhhhHHHHHHHHHhCCCCCCcEEEEecCCCccccccccCccce
Q 005046 56 ICDCLIAFYSSGYPLEKAESYATLRKPFLVNELEPQHLLHDRRKVYEQLEKYGIPVPRYALVNREVPYQELDYFIEEEDF 135 (716)
Q Consensus 56 ~~D~lIsf~s~gfpl~kai~y~~lr~p~~iNdl~~q~~l~DR~~~lqiL~~~gIP~P~t~~~~r~~~~~~~~~~~e~~d~ 135 (716)
.||++++.|+.-..+..+.+..+..+.++.++.++..+++||....++|+++|||+|.+.
T Consensus 63 ~~D~v~~~~~~~~~~~~~~~~~~~~~~~~g~~~~a~~~~~dK~~~k~~l~~~gip~~~~~-------------------- 122 (363)
T 4ffl_A 63 RVDAVLPVNENLACIEFLNSIKEKFSCPVLFDFEAYRISRDKKKSKDYFKSIGVPTPQDR-------------------- 122 (363)
T ss_dssp SSSEEEECCCCHHHHHHHHHHGGGCSSCBCCCHHHHHHHTSHHHHHHHHHHTTCCCCCBS--------------------
T ss_pred CCCEEEECCCChhHHHHHHHHHHHCCCccCCCHHHHHHhhCHHHHHHHHHhcCCCCCCce--------------------
Confidence 589999887643233334444566677788999999999999999999999999998641
Q ss_pred eeecCeeecCcEEEeeccccCcceeEEeccCCCChHHHHHhhhCCCcccccccccccccCcceEEeeccCCCCceeEEEE
Q 005046 136 VEVHGNRFWKPFVEKPVHGDDHSIMIYYPSSAGGGMKELFRKVGNRSSEFHPDVRRVRREGSYIYEEFMPTGGTDVKVYT 215 (716)
Q Consensus 136 I~v~G~~~~kPfVeKpv~GedHni~IYyp~~~GgG~~rLfrkign~sS~~~p~~~~~r~~gsyIyQEFi~~~G~DIKvyt 215 (716)
.++.|+|+||..|. .|.|+. . +.|... .......++.|||+. |..+-|.+
T Consensus 123 ------~ig~P~vvKp~~g~-----------g~~gv~-~---v~~~~~-------~~~~~~~~~~ee~i~--g~e~sv~~ 172 (363)
T 4ffl_A 123 ------PSKPPYFVKPPCES-----------SSVGAR-I---IYDDKD-------LEGLEPDTLVEEYVE--GEVVSLEV 172 (363)
T ss_dssp ------CSSSCEEEECSSCC-----------TTTTCE-E---EC-------------CCCTTCEEEECCC--SEEEEEEE
T ss_pred ------ecCCCEEEEECCCC-----------CCcCeE-E---eccHHH-------hhhhccchhhhhhcc--CcEEEEEE
Confidence 12499999999886 444543 2 222211 122466789999996 66666666
Q ss_pred ECC--cee-EEEeecCCCCCCceeecCCCCceeeeeeCCHHHHHHHHHHHHHhcCc-eeeEeEEeeCCCcEEEeccC
Q 005046 216 VGP--EYA-HAEARKSPVVDGVVMRNPDGKEVRYPVLLTPNEKQMAREVCIAFRQA-VCGFDLLRCEGRSYVCDVNG 288 (716)
Q Consensus 216 VG~--~~v-hAe~RKSPv~DG~vrrN~~gke~r~pv~Lt~eEk~iA~ka~kafgq~-VcGfDLLRs~g~syV~DVNg 288 (716)
++. ..+ +...+. ...+..+...-.|..+.++-+++|.++++++|.. +++||++.+.+++||+|||-
T Consensus 173 ~~d~~~~~~~~~~~~-------~~~~~~~~~~~~p~~~~~~~~~~a~~~~~~l~~~G~~~vef~~~~~~~~viEiN~ 242 (363)
T 4ffl_A 173 VGDGSHFAVVKETLV-------HIDETYDCHMVTPLPANPLFRQISHDLAANLPLKGIMDVEAIFGPKGLRVIEIDA 242 (363)
T ss_dssp EEESSCEEECCCEEE-------EECTTSCEEEEEECCCCHHHHHHHHHHHHTTTCEEEEEEEEEEETTEEEEEEEEC
T ss_pred EEECCeEEEEEEEEe-------ccCCcccceeecchhHHHHHHHHHHHHHHhCCccceeeeeeEEeCCeEEEEEEeC
Confidence 643 222 112221 1223344455668889999999999999999985 99999999999999999997
No 42
>2qk4_A Trifunctional purine biosynthetic protein adenosi; purine synthesis, enzyme, protein-ATP complex, structural GE structural genomics consortium, SGC; HET: ATP; 2.45A {Homo sapiens}
Probab=99.28 E-value=1.3e-12 Score=140.35 Aligned_cols=206 Identities=13% Similarity=0.137 Sum_probs=124.2
Q ss_pred cCeeeccccCCCcH-HHHHHHHHhcCCccc-CCchhhhHhhhHHHHHHHHHhCCCCCCcEEEEecCCCccccccccCccc
Q 005046 57 CDCLIAFYSSGYPL-EKAESYATLRKPFLV-NELEPQHLLHDRRKVYEQLEKYGIPVPRYALVNREVPYQELDYFIEEED 134 (716)
Q Consensus 57 ~D~lIsf~s~gfpl-~kai~y~~lr~p~~i-Ndl~~q~~l~DR~~~lqiL~~~gIP~P~t~~~~r~~~~~~~~~~~e~~d 134 (716)
+|++++... .++ ..+.+.++..+..++ |+..+..+++||....++|+++|||+|++..+... ++
T Consensus 89 ~d~V~~~~E--~~~~~~~~~~l~~~gi~~~g~~~~~~~~~~dK~~~k~~l~~~gip~p~~~~~~~~------------~~ 154 (452)
T 2qk4_A 89 IEFVVVGPE--APLAAGIVGNLRSAGVQCFGPTAEAAQLESSKRFAKEFMDRHGIPTAQWKAFTKP------------EE 154 (452)
T ss_dssp CCEEEECSS--HHHHTTHHHHHHHTTCCEESCCTTTTHHHHBHHHHHHHHHHTTCCBCCEEEESSH------------HH
T ss_pred CCEEEECCc--HHHHHHHHHHHHhcCCcEeCcCHHHHHHhcCHHHHHHHHHHCCCCCCCeEEECCH------------HH
Confidence 688887432 332 345566667775444 99999999999999999999999999999887622 12
Q ss_pred eeeecCeeecCc-EEEeecccc-CcceeEEeccCCCChHHHHHhhhCCCcccccccccccccCcceEEeeccCCCCceeE
Q 005046 135 FVEVHGNRFWKP-FVEKPVHGD-DHSIMIYYPSSAGGGMKELFRKVGNRSSEFHPDVRRVRREGSYIYEEFMPTGGTDVK 212 (716)
Q Consensus 135 ~I~v~G~~~~kP-fVeKpv~Ge-dHni~IYyp~~~GgG~~rLfrkign~sS~~~p~~~~~r~~gsyIyQEFi~~~G~DIK 212 (716)
....- ..++.| +|+||..|. ..++++. .+.. -....++.+-+. +.|. ..+..+|+||||+ |.++.
T Consensus 155 ~~~~~-~~~g~P~vvvKp~~~~gg~Gv~~v--~~~~-el~~~~~~~~~~-~~~g------~~~~~~lvEe~i~--G~E~s 221 (452)
T 2qk4_A 155 ACSFI-LSADFPALVVKASGLAAGKGVIVA--KSKE-EACKAVQEIMQE-KAFG------AAGETIVIEELLD--GEEVS 221 (452)
T ss_dssp HHHHH-HHCSSCEEEEEESBC---CCEEEC--SSHH-HHHHHHHHHTTC--------------CCEEEEECCC--SEEEE
T ss_pred HHHHH-HhCCCCeEEEEeCCCCCCCCEEEe--CCHH-HHHHHHHHHHhh-hhcc------CCCCeEEEEECCC--CCeEE
Confidence 21110 124589 999999885 1222222 1110 111222222110 0010 0246799999999 88999
Q ss_pred EEEEC-Cc-eeE-EEeec-CCCCCCceeecCCCCceeeeee-CCHHHH-----HHHHHHHHHhc------CceeeEeEEe
Q 005046 213 VYTVG-PE-YAH-AEARK-SPVVDGVVMRNPDGKEVRYPVL-LTPNEK-----QMAREVCIAFR------QAVCGFDLLR 276 (716)
Q Consensus 213 vytVG-~~-~vh-Ae~RK-SPv~DG~vrrN~~gke~r~pv~-Lt~eEk-----~iA~ka~kafg------q~VcGfDLLR 276 (716)
|.+++ ++ +++ ...|. -.+.++...-|+.+-+.-.|.. |+++.. ++|.+++++++ ..+++||++.
T Consensus 222 v~~~~dG~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~P~~~l~~~~~~~~~~~~a~~~~~~l~~~g~~~~G~~~ve~~~ 301 (452)
T 2qk4_A 222 CLCFTDGKTVAPMPPAQDHKRLLEGDGGPNTGGMGAYCPAPQVSNDLLLKIKDTVLQRTVDGMQQEGTPYTGILYAGIML 301 (452)
T ss_dssp EEEEECSSCEEECCCBEEEEEEETTTEEEEEEEEEEEESCTTCCHHHHHHHHHHTHHHHHHHHHHTTCCCCEEEEEEEEE
T ss_pred EEEEECCCEEEEcceeeecccccCCCCCCCCCCceeeccCccCCHHHHHHHHHHHHHHHHHHHHHcCCCceeEEEEEEEE
Confidence 98884 33 332 22221 1123443333333333345665 887543 57788888873 3589999999
Q ss_pred eCCCcEEEeccCc
Q 005046 277 CEGRSYVCDVNGW 289 (716)
Q Consensus 277 s~g~syV~DVNgw 289 (716)
+.+|+||+|||.-
T Consensus 302 ~~~g~~viEiN~R 314 (452)
T 2qk4_A 302 TKNGPKVLEFNCR 314 (452)
T ss_dssp ETTEEEEEEEESS
T ss_pred eCCCcEEEEEecc
Confidence 8877999999963
No 43
>3lp8_A Phosphoribosylamine-glycine ligase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.15A {Ehrlichia chaffeensis}
Probab=99.27 E-value=4.7e-12 Score=136.99 Aligned_cols=206 Identities=14% Similarity=0.147 Sum_probs=132.4
Q ss_pred cCeeeccccCCCcH-HHHHHHHHhcCCccc-CCchhhhHhhhHHHHHHHHHhCCCCCCcEEEEecCCCccccccccCccc
Q 005046 57 CDCLIAFYSSGYPL-EKAESYATLRKPFLV-NELEPQHLLHDRRKVYEQLEKYGIPVPRYALVNREVPYQELDYFIEEED 134 (716)
Q Consensus 57 ~D~lIsf~s~gfpl-~kai~y~~lr~p~~i-Ndl~~q~~l~DR~~~lqiL~~~gIP~P~t~~~~r~~~~~~~~~~~e~~d 134 (716)
+|++|+. ...|+ ..+.+.++..+..++ |+..+..+++||..+.++|+++|||+|++..+... + +..+
T Consensus 84 id~vv~g--~E~~l~~~~~~~l~~~Gi~~~Gp~~~a~~~~~dK~~~k~~l~~~GIp~p~~~~~~~~---~------ea~~ 152 (442)
T 3lp8_A 84 IELVVIG--PETPLMNGLSDALTEEGILVFGPSKAAARLESSKGFTKELCMRYGIPTAKYGYFVDT---N------SAYK 152 (442)
T ss_dssp CCEEEEC--SHHHHHTTHHHHHHHTTCEEESCCHHHHHHHHCHHHHHHHHHHHTCCBCCEEEESSH---H------HHHH
T ss_pred CCEEEEC--CcHHHHHHHHHHHHhcCCcEecCCHHHHHHhhCHHHHHHHHHHCCCCCCCEEEECCH---H------HHHH
Confidence 5777762 33344 245667778887666 99999999999999999999999999999888722 1 1112
Q ss_pred eeeecCeeecCcEEEeecccc-CcceeEEeccCCCChHHHHHhhhCCCcccccccccccccCcceEEeeccCCCCceeEE
Q 005046 135 FVEVHGNRFWKPFVEKPVHGD-DHSIMIYYPSSAGGGMKELFRKVGNRSSEFHPDVRRVRREGSYIYEEFMPTGGTDVKV 213 (716)
Q Consensus 135 ~I~v~G~~~~kPfVeKpv~Ge-dHni~IYyp~~~GgG~~rLfrkign~sS~~~p~~~~~r~~gsyIyQEFi~~~G~DIKv 213 (716)
++. .++.|+|+||..|. ..++++-.... -....++.+-+. ..|. ..+..+|+||||+ |.++-|
T Consensus 153 ~~~----~~g~PvVvKp~~~~gg~GV~iv~~~e---el~~a~~~~~~~-~~~g------~~~~~vlvEe~i~--G~E~sv 216 (442)
T 3lp8_A 153 FID----KHKLPLVVKADGLAQGKGTVICHTHE---EAYNAVDAMLVH-HKFG------EAGCAIIIEEFLE--GKEISF 216 (442)
T ss_dssp HHH----HSCSSEEEEESSCCTTTSEEEESSHH---HHHHHHHHHHTS-CTTG------GGGSSEEEEECCC--SEEEEE
T ss_pred HHH----HcCCcEEEeECCCCCCCeEEEeCCHH---HHHHHHHHHHhh-cccC------CCCCeEEEEEeec--CcEEEE
Confidence 222 24599999999875 22333322111 011222222110 0111 1235799999999 788877
Q ss_pred EEE--CCceeE-EEee-cCCCCCCceeecCCCCceeeeee-CCHHHHHH--------HHHHHHHhcCce---eeEeEEee
Q 005046 214 YTV--GPEYAH-AEAR-KSPVVDGVVMRNPDGKEVRYPVL-LTPNEKQM--------AREVCIAFRQAV---CGFDLLRC 277 (716)
Q Consensus 214 ytV--G~~~vh-Ae~R-KSPv~DG~vrrN~~gke~r~pv~-Lt~eEk~i--------A~ka~kafgq~V---cGfDLLRs 277 (716)
.++ |..++. +..+ .-++.||+.--|+-|-+.-.|.. |+++..+- |.++.+++|..+ +++|++.+
T Consensus 217 ~~~~dg~~~~~~~~~~~~~~~~~~~~g~~~gg~g~~~P~~~l~~~~~~~i~~~i~~~a~~~~~a~g~~~~G~~~ve~~~~ 296 (442)
T 3lp8_A 217 FTLVDGSNPVILGVAQDYKTIGDNNKGPNTGGMGSYSKPNIITQEMEHIIIQKIIYPTIKAMFNMNIQFRGLLFAGIIIK 296 (442)
T ss_dssp EEEEESSCEEEEEEEEECCEEEGGGEEEECSCSEEEECTTSSCHHHHHHHHHHTHHHHHHHHHHTTCCCEEEEEEEEEEE
T ss_pred EEEECCCeEEEeEEeEeeeecccCCCCCCCCCcEEEeeCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCceeEEEEEEEEe
Confidence 776 444432 2322 23334666666776767667876 88866543 556668888754 55999999
Q ss_pred CCCcEEEeccCc
Q 005046 278 EGRSYVCDVNGW 289 (716)
Q Consensus 278 ~g~syV~DVNgw 289 (716)
.+++||+|||.-
T Consensus 297 ~~g~~viEiN~R 308 (442)
T 3lp8_A 297 KNEPKLLEYNVR 308 (442)
T ss_dssp TTEEEEEEEESS
T ss_pred CCCeEEEEEecC
Confidence 888999999953
No 44
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=99.25 E-value=6.3e-11 Score=127.54 Aligned_cols=190 Identities=13% Similarity=0.180 Sum_probs=125.9
Q ss_pred CcCeeeccccCCCcHHHHHHHHHhcCCcccCCchhhhHhhhHHHHHHHHHhCCCCCCcEEEEecCCCccccccccCccce
Q 005046 56 ICDCLIAFYSSGYPLEKAESYATLRKPFLVNELEPQHLLHDRRKVYEQLEKYGIPVPRYALVNREVPYQELDYFIEEEDF 135 (716)
Q Consensus 56 ~~D~lIsf~s~gfpl~kai~y~~lr~p~~iNdl~~q~~l~DR~~~lqiL~~~gIP~P~t~~~~r~~~~~~~~~~~e~~d~ 135 (716)
.||++++-|. ..+ ..++++++.. .++.++..+..+++||....++|+++|||+|++..+... ++.
T Consensus 96 ~~D~V~~~~e-~~~-~~~~~~l~~~-~~vgp~~~a~~~~~dK~~~k~~l~~~Gip~p~~~~v~~~------------~e~ 160 (419)
T 4e4t_A 96 LCEAVSTEFE-NVP-AASLDFLART-TFVAPAGRCVAVAQDRIAEKRFIEASGVPVAPHVVIESA------------AAL 160 (419)
T ss_dssp HCSEEEECCT-TCC-HHHHHHHHTT-SEESSCHHHHHHHTCHHHHHHHHHHTTCCBCCEEEECSH------------HHH
T ss_pred cCCEEEEccC-cCC-HHHHHHHHcc-CCcCCCHHHHHHhcCHHHHHHHHHHcCcCCCCeEEECCH------------HHH
Confidence 5888884432 233 4666777776 689999999999999999999999999999999988732 222
Q ss_pred eeecCee----ecCcEEEeec-cccC-cceeEEeccCCCChHHHHHhhhCCCcccccccccccccCcceEEeeccCCCCc
Q 005046 136 VEVHGNR----FWKPFVEKPV-HGDD-HSIMIYYPSSAGGGMKELFRKVGNRSSEFHPDVRRVRREGSYIYEEFMPTGGT 209 (716)
Q Consensus 136 I~v~G~~----~~kPfVeKpv-~Ged-Hni~IYyp~~~GgG~~rLfrkign~sS~~~p~~~~~r~~gsyIyQEFi~~~G~ 209 (716)
.... .. + .|+|+||. .|.+ .++++...... ....++.. .++.+|+||||+- +.
T Consensus 161 ~~~~-~~~~~~~-~P~VvKp~~~g~~G~Gv~~v~~~~e---l~~a~~~~---------------~~~~~lvEe~i~~-~~ 219 (419)
T 4e4t_A 161 AALD-DAALDAV-LPGILKTARLGYDGKGQVRVSTARE---ARDAHAAL---------------GGVPCVLEKRLPL-KY 219 (419)
T ss_dssp HTSC-HHHHHTT-CSEEEEESSSCCTTTTEEEECSHHH---HHHHHHHT---------------TTCCEEEEECCCE-EE
T ss_pred HHHH-Hhhcccc-CCEEEEecCCCCCCCceEEECCHHH---HHHHHHhc---------------CCCcEEEeecCCC-Ce
Confidence 2211 22 5 89999999 6652 33333322110 11112111 3577999999986 67
Q ss_pred eeEEEEECC---ceeE---EEeecCCCCCCceeecCCCCceeeeee-CCH----HHHHHHHHHHHHhcCc-eeeEeEEee
Q 005046 210 DVKVYTVGP---EYAH---AEARKSPVVDGVVMRNPDGKEVRYPVL-LTP----NEKQMAREVCIAFRQA-VCGFDLLRC 277 (716)
Q Consensus 210 DIKvytVG~---~~vh---Ae~RKSPv~DG~vrrN~~gke~r~pv~-Lt~----eEk~iA~ka~kafgq~-VcGfDLLRs 277 (716)
.+-|.++++ +++. .+.+.. +|.+. +.-.|.. |++ +-+++|.++++++|.. +++||++.+
T Consensus 220 Eisv~v~~~~~G~~~~~~~~e~~~~---~g~~~------~~~~Pa~~l~~~~~~~~~~~a~~i~~~lg~~G~~~vE~~~~ 290 (419)
T 4e4t_A 220 EVSALIARGADGRSAAFPLAQNVHH---NGILA------LTIVPAPAADTARVEEAQQAAVRIADTLGYVGVLCVEFFVL 290 (419)
T ss_dssp EEEEEEEECTTSCEEECCCEEEEEE---TTEEE------EEEESCTTCCHHHHHHHHHHHHHHHHHHTCCEEEEEEEEEE
T ss_pred EEEEEEEEcCCCCEEEEeCeEEEee---CCeEE------EEEcCCCCCCHHHHHHHHHHHHHHHHHCCCeeEEEEEEEEe
Confidence 888988853 2221 111211 22221 1123555 776 4467899999999986 999999998
Q ss_pred CC-CcEEEeccCcc
Q 005046 278 EG-RSYVCDVNGWS 290 (716)
Q Consensus 278 ~g-~syV~DVNgwS 290 (716)
.+ .+||+|||-=.
T Consensus 291 ~dG~~~v~EiNpR~ 304 (419)
T 4e4t_A 291 EDGSFVANEMAPRP 304 (419)
T ss_dssp TTCCEEEEEEESSC
T ss_pred CCCCEEEEEEeCCC
Confidence 65 49999999643
No 45
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=99.24 E-value=4.9e-11 Score=127.36 Aligned_cols=185 Identities=17% Similarity=0.234 Sum_probs=121.0
Q ss_pred HHHHHHHHhcCCcccCCchhhhHhhhHHHHHHHHHhCCCCCCcEEEEecCCCccccccccCccceeeecCeeecCcEEEe
Q 005046 71 EKAESYATLRKPFLVNELEPQHLLHDRRKVYEQLEKYGIPVPRYALVNREVPYQELDYFIEEEDFVEVHGNRFWKPFVEK 150 (716)
Q Consensus 71 ~kai~y~~lr~p~~iNdl~~q~~l~DR~~~lqiL~~~gIP~P~t~~~~r~~~~~~~~~~~e~~d~I~v~G~~~~kPfVeK 150 (716)
..++++++. +..+.++..+..+++||....++|+++|||+|++..+.... .++.... -..++.|+|+|
T Consensus 99 ~~~l~~l~~-g~~v~p~~~a~~~~~dK~~~k~~l~~~Gip~p~~~~~~~~~----------~~~~~~~-~~~~g~P~VvK 166 (403)
T 3k5i_A 99 TYALEEVAS-EVKIEPSWQAIRTIQNKFNQKEHLRKYGIPMAEHRELVENT----------PAELAKV-GEQLGYPLMLK 166 (403)
T ss_dssp HHHHHHHTT-TSEESSCHHHHHHHTSHHHHHHHHHTTTCCBCCEEEESSCC----------HHHHHHH-HHHHCSSEEEE
T ss_pred HHHHHHHHc-CCccCcCHHHHHHhcCHHHHHHHHHHCCcCCCCEEEEcCCC----------HHHHHHH-HHHhCCCEEEE
Confidence 456777777 77789999999999999999999999999999999987321 1111111 12345899999
Q ss_pred eccc--cCcceeEEeccCCCChHHHHHhhhCCCcccccccccccccCcceEEeeccCCCCceeEEEEECCceeEEEeecC
Q 005046 151 PVHG--DDHSIMIYYPSSAGGGMKELFRKVGNRSSEFHPDVRRVRREGSYIYEEFMPTGGTDVKVYTVGPEYAHAEARKS 228 (716)
Q Consensus 151 pv~G--edHni~IYyp~~~GgG~~rLfrkign~sS~~~p~~~~~r~~gsyIyQEFi~~~G~DIKvytVG~~~vhAe~RKS 228 (716)
|..| ...++++...... ....++.. .+..+|+||||+- |.++.|.++++..- .+--
T Consensus 167 p~~gg~~g~Gv~~v~~~~e---l~~a~~~~---------------~~~~~lvEe~i~~-~~E~sv~v~~~~~g---~~~~ 224 (403)
T 3k5i_A 167 SKTMAYDGRGNFRVNSQDD---IPEALEAL---------------KDRPLYAEKWAYF-KMELAVIVVKTKDE---VLSY 224 (403)
T ss_dssp ESSSCCTTTTEEEECSTTS---HHHHHHHT---------------TTSCEEEEECCCE-EEEEEEEEEECSSC---EEEC
T ss_pred eCCCCcCCCCEEEECCHHH---HHHHHHhc---------------CCCcEEEecCCCC-CeEEEEEEEEcCCC---EEEe
Confidence 9876 3344444332211 12222211 2567999999963 78999999875321 1122
Q ss_pred CCCCCceeecCCCCceeeeee-CCHHH----HHHHHHHHHHhcCc-eeeEeEEeeCC-CcEEEeccCcc
Q 005046 229 PVVDGVVMRNPDGKEVRYPVL-LTPNE----KQMAREVCIAFRQA-VCGFDLLRCEG-RSYVCDVNGWS 290 (716)
Q Consensus 229 Pv~DG~vrrN~~gke~r~pv~-Lt~eE----k~iA~ka~kafgq~-VcGfDLLRs~g-~syV~DVNgwS 290 (716)
|+. ..+.++-.-.+.-.|.. |+++. +++|.++++++|.. +++||++.+.+ .+||+|||-=.
T Consensus 225 p~~-~~~~~~g~~~~~~~Pa~~l~~~~~~~~~~~a~~i~~~Lg~~G~~~ve~~~~~dg~~~v~EiNpR~ 292 (403)
T 3k5i_A 225 PTV-ETVQEDSICKLVYAPARNVSDAINQKAQELARKAVAAFDGKGVFGVEMFLLEDDSIMLCEIASRI 292 (403)
T ss_dssp CCE-EEEEETTEEEEEEESCSSCCHHHHHHHHHHHHHHHHTSCCSEEEEEEEEEETTSCEEEEEEESSC
T ss_pred CCe-eeEEeCCEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHcCCeeEEEEEEEEeCCCcEEEEEeecCC
Confidence 311 11111111112234666 77755 47899999999985 88999998854 59999999653
No 46
>3mjf_A Phosphoribosylamine--glycine ligase; structural genomics, CEN structural genomics of infectious diseases, csgid; HET: MSE PGE; 1.47A {Yersinia pestis} PDB: 1gso_A
Probab=99.24 E-value=7.3e-12 Score=134.95 Aligned_cols=206 Identities=15% Similarity=0.093 Sum_probs=131.8
Q ss_pred cCeeeccccCCCcH-HHHHHHHHhcCCccc-CCchhhhHhhhHHHHHHHHHhCCCCCCcEEEEecCCCccccccccCccc
Q 005046 57 CDCLIAFYSSGYPL-EKAESYATLRKPFLV-NELEPQHLLHDRRKVYEQLEKYGIPVPRYALVNREVPYQELDYFIEEED 134 (716)
Q Consensus 57 ~D~lIsf~s~gfpl-~kai~y~~lr~p~~i-Ndl~~q~~l~DR~~~lqiL~~~gIP~P~t~~~~r~~~~~~~~~~~e~~d 134 (716)
+|.+|+. ...|+ ..+.+.++..+..++ ++..+..+++||..+.++|+++|||+|++..+... + +..+
T Consensus 68 id~vv~g--~e~~l~~~~~~~l~~~Gi~~~Gp~~~a~~~~~dK~~~k~~l~~~GIptp~~~~~~~~---~------ea~~ 136 (431)
T 3mjf_A 68 IGLTIVG--PEAPLVIGVVDAFRAAGLAIFGPTQAAAQLEGSKAFTKDFLARHNIPSAEYQNFTDV---E------AALA 136 (431)
T ss_dssp EEEEEEC--SHHHHHTTHHHHHHHTTCCEESCCHHHHHHHHCHHHHHHHHHHTTCSBCCEEEESCH---H------HHHH
T ss_pred cCEEEEC--CchHHHHHHHHHHHhcCCCeeCCCHHHHHHhhCHHHHHHHHHHcCCCCCCeEeeCCH---H------HHHH
Confidence 5666653 23344 346677778886665 99999999999999999999999999999888732 1 1112
Q ss_pred eeeecCeeecCcEEEeecccc-CcceeEEeccCCCChHHHHHhhhCCCcccccccccccccCcceEEeeccCCCCceeEE
Q 005046 135 FVEVHGNRFWKPFVEKPVHGD-DHSIMIYYPSSAGGGMKELFRKVGNRSSEFHPDVRRVRREGSYIYEEFMPTGGTDVKV 213 (716)
Q Consensus 135 ~I~v~G~~~~kPfVeKpv~Ge-dHni~IYyp~~~GgG~~rLfrkign~sS~~~p~~~~~r~~gsyIyQEFi~~~G~DIKv 213 (716)
++. .++.|+|+||..|. ..++++...... ....++.+-.. ..|. ..+..+|+||||+ |.++.|
T Consensus 137 ~~~----~~g~PvVvKp~~~~gg~GV~iv~~~~e---l~~a~~~~~~~-~~~g------~~~~~vlvEe~i~--G~E~sv 200 (431)
T 3mjf_A 137 YVR----QKGAPIVIKADGLAAGKGVIVAMTQEE---AETAVNDMLAG-NAFG------DAGHRIVVEEFLD--GEEASF 200 (431)
T ss_dssp HHH----HHCSSEEEEESSSCTTCSEEEECSHHH---HHHHHHHHHTT-HHHH------CCCCCEEEEECCC--SEEEEE
T ss_pred HHH----HcCCeEEEEECCCCCCCcEEEeCCHHH---HHHHHHHHHhh-cccc------CCCCeEEEEEeeC--CcEEEE
Confidence 222 24589999999875 223322221110 11122221100 0010 1245799999999 788888
Q ss_pred EEE--CCceeEE-E-eecCCCCCCceeecCCCCceeeeee-CCHHHHHHHH--------HHHHHhcCce---eeEeEEee
Q 005046 214 YTV--GPEYAHA-E-ARKSPVVDGVVMRNPDGKEVRYPVL-LTPNEKQMAR--------EVCIAFRQAV---CGFDLLRC 277 (716)
Q Consensus 214 ytV--G~~~vhA-e-~RKSPv~DG~vrrN~~gke~r~pv~-Lt~eEk~iA~--------ka~kafgq~V---cGfDLLRs 277 (716)
.++ |..++.. + .+..++.+|+..-|+-|-+.-.|.. |+++..+-+. ++.+++|..+ +.+|++.+
T Consensus 201 ~~~~dg~~~~~~~~~~~~~~~~~~~~g~~~gg~g~~~P~~~l~~~~~~~i~~~i~~~~~~~~~~~g~~~~G~~~ve~~~~ 280 (431)
T 3mjf_A 201 IVMVDGENVLPMATSQDHKRVGDGDTGPNTGGMGAYSPAPVVTDDVHQRVMDQVIWPTVRGMAAEGNIYTGFLYAGLMIS 280 (431)
T ss_dssp EEEEESSCEEECCCBEECCEEETTTEEEECSCSEEEESCTTSCHHHHHHHHHHTHHHHHHHHHHTTCCCEEEEEEEEEEC
T ss_pred EEEEcCCEEEEEEeeEeceecccCCCCCCCCCceEEeeCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEEEEEEe
Confidence 777 4344331 1 1223335776666777777777887 8987765544 4457778755 45999999
Q ss_pred CCC-cEEEeccCc
Q 005046 278 EGR-SYVCDVNGW 289 (716)
Q Consensus 278 ~g~-syV~DVNgw 289 (716)
.+| +||+|+|.-
T Consensus 281 ~~g~~~viEiN~R 293 (431)
T 3mjf_A 281 ADGQPKVIEFNCR 293 (431)
T ss_dssp TTSCEEEEEECGG
T ss_pred CCCCeEEEEEecC
Confidence 877 999999954
No 47
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=99.24 E-value=1.1e-10 Score=123.19 Aligned_cols=191 Identities=14% Similarity=0.228 Sum_probs=124.1
Q ss_pred CcCeeeccccCCCcHHHHHHHHHhcCCcccCCchhhhHhhhHHHHHHHHHhCCCCCCcEEEEecCCCccccccccCccce
Q 005046 56 ICDCLIAFYSSGYPLEKAESYATLRKPFLVNELEPQHLLHDRRKVYEQLEKYGIPVPRYALVNREVPYQELDYFIEEEDF 135 (716)
Q Consensus 56 ~~D~lIsf~s~gfpl~kai~y~~lr~p~~iNdl~~q~~l~DR~~~lqiL~~~gIP~P~t~~~~r~~~~~~~~~~~e~~d~ 135 (716)
.||++++-| ...+. .++++++... ++.++..+..+++||....++|+++|||+|++..+... ++.
T Consensus 73 ~~dvi~~~~-E~~~~-~~l~~l~~~~-~v~p~~~~~~~~~dK~~~k~~l~~~Gip~p~~~~~~~~------------~~~ 137 (377)
T 3orq_A 73 KCDVITYEF-ENISA-QQLKLLCEKY-NIPQGYQAIQLLQDRLTEKETLKSAGTKVVPFISVKES------------TDI 137 (377)
T ss_dssp HCSEEEESS-TTSCH-HHHHHHHHHS-CCTTTTHHHHHHHSHHHHHHHHHHTTCCBCCEEEECSS------------THH
T ss_pred hCCcceecc-cccCH-HHHHHHhhhc-CCCCCHHHHHHhcCHHHHHHHHHHCCCCCCCeEEECCH------------HHH
Confidence 378765433 34444 3556666654 45589999999999999999999999999999988733 121
Q ss_pred eeecCeeecCcEEEeecccc--CcceeEEeccCCCChHHHHHhhhCCCcccccccccccccCcceEEeeccCCCCceeEE
Q 005046 136 VEVHGNRFWKPFVEKPVHGD--DHSIMIYYPSSAGGGMKELFRKVGNRSSEFHPDVRRVRREGSYIYEEFMPTGGTDVKV 213 (716)
Q Consensus 136 I~v~G~~~~kPfVeKpv~Ge--dHni~IYyp~~~GgG~~rLfrkign~sS~~~p~~~~~r~~gsyIyQEFi~~~G~DIKv 213 (716)
... ...++.|+|+||..|. .+++++...... ....++.. .++.+|+||||+- ...+.|
T Consensus 138 ~~~-~~~~g~P~vvKp~~gg~~g~Gv~~v~~~~e---l~~a~~~~---------------~~~~~ivEe~i~g-~~E~sv 197 (377)
T 3orq_A 138 DKA-IETLGYPFIVKTRFGGYDGKGQVLINNEKD---LQEGFKLI---------------ETSECVAEKYLNI-KKEVSL 197 (377)
T ss_dssp HHH-HHHTCSSEEEEESSSCCTTTTEEEECSTTS---HHHHHHHH---------------TTSCEEEEECCCE-EEEEEE
T ss_pred HHH-HHHcCCCEEEEeCCCCCCCCCeEEECCHHH---HHHHHHhc---------------CCCcEEEEccCCC-CEEEEE
Confidence 111 1124589999999873 334433322211 12222222 2377999999982 278999
Q ss_pred EEE-CC--ceeE---EEeecCCCCCCceeecCCCCceeeeeeCCH--HHHHHHHHHHHHhcCc-eeeEeEEee-CCCcEE
Q 005046 214 YTV-GP--EYAH---AEARKSPVVDGVVMRNPDGKEVRYPVLLTP--NEKQMAREVCIAFRQA-VCGFDLLRC-EGRSYV 283 (716)
Q Consensus 214 ytV-G~--~~vh---Ae~RKSPv~DG~vrrN~~gke~r~pv~Lt~--eEk~iA~ka~kafgq~-VcGfDLLRs-~g~syV 283 (716)
.++ +. ++.. .+.... +|.+ .+.-.|..+++ +-+++|.++++++|.. +++||++.+ .|.+||
T Consensus 198 ~~~~~~~g~~~~~~~~e~~~~---~g~~------~~~~~Pa~l~~~~~~~~~a~~i~~~lg~~G~~~ve~~~~~~g~~~v 268 (377)
T 3orq_A 198 TVTRGNNNQITFFPLQENEHR---NQIL------FKTIVPARIDKTAEAKEQVNKIIQSIHFIGTFTVEFFIDSNNQLYV 268 (377)
T ss_dssp EEEECGGGCEEECCCEEEEEE---TTEE------EEEEESCSSCCHHHHHHHHHHHHTTSCCCEEEEEEEEEETTCCEEE
T ss_pred EEEEeCCCCEEEECCEeEEEE---CCEE------EEEECCCCCCHHHHHHHHHHHHHHHCCCeEEEEEEEEEeCCCcEEE
Confidence 998 42 2221 111111 3332 12234555654 6678999999999996 999999998 566999
Q ss_pred EeccCcc
Q 005046 284 CDVNGWS 290 (716)
Q Consensus 284 ~DVNgwS 290 (716)
+|||--.
T Consensus 269 ~EinpR~ 275 (377)
T 3orq_A 269 NEIAPRP 275 (377)
T ss_dssp EEEESSC
T ss_pred EEeeCCc
Confidence 9999765
No 48
>3eth_A Phosphoribosylaminoimidazole carboxylase ATPase subunit; ATP-grAsp, purine biosynthesis, antimicrobial, ATP-binding, decarboxylase, lyase; HET: ATP; 1.60A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1b6r_A* 3etj_A* 1b6s_A*
Probab=99.23 E-value=8.6e-11 Score=124.74 Aligned_cols=189 Identities=12% Similarity=0.122 Sum_probs=128.1
Q ss_pred CcCeeeccccCCCcHHHHHHHHHhcCCcccCCchhhhHhhhHHHHHHHHHhCCCCCCcEEEEecCCCccccccccCccce
Q 005046 56 ICDCLIAFYSSGYPLEKAESYATLRKPFLVNELEPQHLLHDRRKVYEQLEKYGIPVPRYALVNREVPYQELDYFIEEEDF 135 (716)
Q Consensus 56 ~~D~lIsf~s~gfpl~kai~y~~lr~p~~iNdl~~q~~l~DR~~~lqiL~~~gIP~P~t~~~~r~~~~~~~~~~~e~~d~ 135 (716)
.||++++-|.. .|. .++++++..+ ++.++..+..+++||...-++|+++|||+|++..+... ++.
T Consensus 42 ~~d~it~e~e~-v~~-~~l~~l~~~~-~v~p~~~a~~~~~DK~~~k~~l~~~GIptp~~~~v~~~------------~e~ 106 (355)
T 3eth_A 42 QQSVITAEIER-WPE-TALTRQLARH-PAFVNRDVFPIIADRLTQKQLFDKLHLPTAPWQLLAER------------SEW 106 (355)
T ss_dssp TTSEEEESCSC-CCC-CHHHHHHHTC-TTBTTTTHHHHHHSHHHHHHHHHHTTCCBCCEEEECCG------------GGH
T ss_pred cCCEEEECcCC-cCH-HHHHHHHhcC-CcCCCHHHHHHhcCHHHHHHHHHHCccCCCCEEEECCH------------HHH
Confidence 89999987753 343 4778888887 89999999999999999999999999999999888732 122
Q ss_pred eeecCeeecCcEEEeeccc-cCcceeEEeccCCCChHHHHHhhhCCCcccccccccccccCcceEEeeccCCCCceeEEE
Q 005046 136 VEVHGNRFWKPFVEKPVHG-DDHSIMIYYPSSAGGGMKELFRKVGNRSSEFHPDVRRVRREGSYIYEEFMPTGGTDVKVY 214 (716)
Q Consensus 136 I~v~G~~~~kPfVeKpv~G-edHni~IYyp~~~GgG~~rLfrkign~sS~~~p~~~~~r~~gsyIyQEFi~~~G~DIKvy 214 (716)
... ...++.|+|+||..| . .|-|+. +.+. .+. +++... .+ + .+|+||||+- |..|-|.
T Consensus 107 ~~~-~~~~G~P~VvKp~~~G~-----------~GkGv~-~v~~-~~~-~el~~a--~~--~-~vivEe~I~~-~~Eisv~ 165 (355)
T 3eth_A 107 PAV-FDRLGELAIVKRRTGGY-----------DGRGQW-RLRA-NET-EQLPAE--CY--G-ECIVEQGINF-SGEVSLV 165 (355)
T ss_dssp HHH-HHHHCSEEEEEESSSCC-----------TTTTEE-EEET-TCG-GGSCGG--GT--T-TEEEEECCCC-SEEEEEE
T ss_pred HHH-HHHcCCCEEEEecCCCC-----------CCCeEE-EEcC-CCH-HHHHHH--hh--C-CEEEEEccCC-CcEEEEE
Confidence 211 123559999999984 6 344543 2222 001 112211 11 1 6999999984 6778888
Q ss_pred EECC---ceeE---EEeecCCCCCCceeecCCCCceeeeeeCCHH----HHHHHHHHHHHhcC-ceeeEeEEeeCCCcEE
Q 005046 215 TVGP---EYAH---AEARKSPVVDGVVMRNPDGKEVRYPVLLTPN----EKQMAREVCIAFRQ-AVCGFDLLRCEGRSYV 283 (716)
Q Consensus 215 tVG~---~~vh---Ae~RKSPv~DG~vrrN~~gke~r~pv~Lt~e----Ek~iA~ka~kafgq-~VcGfDLLRs~g~syV 283 (716)
+++. ++++ .+..+. +|.+. +...|..|+++ -+++|.++++++|. .+++||++.+.+++||
T Consensus 166 v~~~~~G~~~~~p~~e~~~~---~g~~~------~~~~pa~l~~~~~~~~~~~a~~i~~aLg~~G~~~vEf~~~~~~~~v 236 (355)
T 3eth_A 166 GARGFDGSTVFYPLTHNLHQ---DGILR------TSVAFPQANAQQQARAEEMLSAIMQELGYVGVMAMECFVTPQGLLI 236 (355)
T ss_dssp EEECTTSCEEECCCEEEEEE---TTEEE------EEEECSSCCHHHHHHHHHHHHHHHHHHTCCEEEEEEEEEETTEEEE
T ss_pred EEEcCCCCEEEECCEEEEee---CCeEE------EEECCCCCCHHHHHHHHHHHHHHHHHCCCeeEEEEEEEEECCcEEE
Confidence 8742 2221 111111 23321 12235567765 36788999999987 4999999999889999
Q ss_pred EeccCc
Q 005046 284 CDVNGW 289 (716)
Q Consensus 284 ~DVNgw 289 (716)
+|||-=
T Consensus 237 ~EinpR 242 (355)
T 3eth_A 237 NELAPR 242 (355)
T ss_dssp EEEESS
T ss_pred EEeeCC
Confidence 999964
No 49
>2w70_A Biotin carboxylase; ligase, ATP-binding, fatty acid biosynthesis, nucleotide-BIN lipid synthesis, ATP-grAsp domain, fragment screening; HET: L22; 1.77A {Escherichia coli} PDB: 1bnc_A 2j9g_A* 2v58_A* 2v59_A* 2v5a_A* 2vr1_A* 2w6m_A* 1dv1_A* 2w6o_A* 2w6n_A* 2w6q_A* 2w6z_A* 2w6p_A* 2w71_A* 3jzf_A* 3jzi_A* 3rv3_A* 3rup_A* 1dv2_A* 3rv4_A* ...
Probab=99.23 E-value=6.7e-12 Score=134.21 Aligned_cols=198 Identities=16% Similarity=0.231 Sum_probs=125.7
Q ss_pred CcCeeeccccCCCcH-HHHHHHHHhcCC-cccCCchhhhHhhhHHHHHHHHHhCCCCCCcEE--EEecCCCccccccccC
Q 005046 56 ICDCLIAFYSSGYPL-EKAESYATLRKP-FLVNELEPQHLLHDRRKVYEQLEKYGIPVPRYA--LVNREVPYQELDYFIE 131 (716)
Q Consensus 56 ~~D~lIsf~s~gfpl-~kai~y~~lr~p-~~iNdl~~q~~l~DR~~~lqiL~~~gIP~P~t~--~~~r~~~~~~~~~~~e 131 (716)
.+|++++.|+. ++. ..+.+.++..+. +.-|+.++..+++||....++|+++|||+|++. .+...
T Consensus 74 ~~d~v~~~~g~-~~e~~~~~~~~e~~gi~~~g~~~~~~~~~~dK~~~k~~l~~~gip~p~~~~~~~~~~----------- 141 (449)
T 2w70_A 74 GAVAIHPGYGF-LSENANFAEQVERSGFIFIGPKAETIRLMGDKVSAIAAMKKAGVPCVPGSDGPLGDD----------- 141 (449)
T ss_dssp TCCEEECCSST-TTTCHHHHHHHHHTTCEESSSCHHHHHHHHSHHHHHHHHHHHTCCBCSBCSSCCCSC-----------
T ss_pred CCCEEEECCCC-cccCHHHHHHHHHcCCceECCCHHHHHHhcCHHHHHHHHHHcCCCcCCCcccccCCH-----------
Confidence 47999987642 121 134566666775 456799999999999999999999999999986 44311
Q ss_pred ccce-eeecCeeecCcEEEeeccccCcceeEEeccCCCChHHHHHhhhCCCcccccccccccc-------cCcceEEeec
Q 005046 132 EEDF-VEVHGNRFWKPFVEKPVHGDDHSIMIYYPSSAGGGMKELFRKVGNRSSEFHPDVRRVR-------REGSYIYEEF 203 (716)
Q Consensus 132 ~~d~-I~v~G~~~~kPfVeKpv~GedHni~IYyp~~~GgG~~rLfrkign~sS~~~p~~~~~r-------~~gsyIyQEF 203 (716)
++. ...- ..++.|+|+||..|. .|.|+. + +.+.. ++..-+.... .++.+|+|||
T Consensus 142 -~~~~~~~~-~~~g~PvvvKp~~g~-----------gg~Gv~-~---v~~~~-el~~~~~~~~~~~~~~~~~~~~lvEe~ 203 (449)
T 2w70_A 142 -MDKNRAIA-KRIGYPVIIKASGGG-----------GGRGMR-V---VRGDA-ELAQSISMTRAEAKAAFSNDMVYMEKY 203 (449)
T ss_dssp -HHHHHHHH-HHHCSSEEEEETTCC-----------TTTTCE-E---ECSHH-HHHHHHHHHHHHHHHHHSCCCEEEEEC
T ss_pred -HHHHHHHH-HHhCCcEEEEECCCC-----------CCCCEE-E---eCCHH-HHHHHHHHHHHHHHhhcCCCcEEEEec
Confidence 122 1110 124589999999985 333432 1 11111 1110000110 1568999999
Q ss_pred cCCCCceeEEEEEC---CceeEEEeecCCCCCCceeecCCCCceeeeee-CCHH----HHHHHHHHHHHhcCc-eeeEeE
Q 005046 204 MPTGGTDVKVYTVG---PEYAHAEARKSPVVDGVVMRNPDGKEVRYPVL-LTPN----EKQMAREVCIAFRQA-VCGFDL 274 (716)
Q Consensus 204 i~~~G~DIKvytVG---~~~vhAe~RKSPv~DG~vrrN~~gke~r~pv~-Lt~e----Ek~iA~ka~kafgq~-VcGfDL 274 (716)
|+- +.++.|.+++ +++++...|..+. .++-..-....|.. |+++ -+++|.++++++|.. +++||+
T Consensus 204 i~g-~~e~~v~~~~~~~G~~~~~~~~~~~~-----~~~~~~~~~~~p~~~l~~~~~~~i~~~a~~~~~~lg~~G~~~ve~ 277 (449)
T 2w70_A 204 LEN-PRHVEIQVLADGQGNAIYLAERDCSM-----QRRHQKVVEEAPAPGITPELRRYIGERCAKACVDIGYRGAGTFEF 277 (449)
T ss_dssp CSS-CEEEEEEEEECTTSCEEEEEEEEEEE-----EETTEEEEEEESCTTCCHHHHHHHHHHHHHHHHHHTCCEEEEEEE
T ss_pred cCC-CeEEEEEEEEcCCCCEEEEeceeccc-----ccCCcceeeeCCcccCCHHHHHHHHHHHHHHHHHcCCCceEEEEE
Confidence 974 4788888776 4567666654321 11100001113443 6654 467899999999975 789999
Q ss_pred EeeCCCcEEEeccCc
Q 005046 275 LRCEGRSYVCDVNGW 289 (716)
Q Consensus 275 LRs~g~syV~DVNgw 289 (716)
+.+.+++||+|||.-
T Consensus 278 ~~~~~~~~viEiN~R 292 (449)
T 2w70_A 278 LFENGEFYFIEMNTR 292 (449)
T ss_dssp EEETTEEEEEEEECS
T ss_pred EEECCCEEEEEEECC
Confidence 999888999999974
No 50
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=99.22 E-value=1.2e-11 Score=125.41 Aligned_cols=190 Identities=14% Similarity=0.065 Sum_probs=109.6
Q ss_pred cCeeeccccCCCcHHHHHHHHHhcCCcccCCchhhhHhhhHHHHHHHHHhCCCCCCcEEEEecCCCccccccccCcccee
Q 005046 57 CDCLIAFYSSGYPLEKAESYATLRKPFLVNELEPQHLLHDRRKVYEQLEKYGIPVPRYALVNREVPYQELDYFIEEEDFV 136 (716)
Q Consensus 57 ~D~lIsf~s~gfpl~kai~y~~lr~p~~iNdl~~q~~l~DR~~~lqiL~~~gIP~P~t~~~~r~~~~~~~~~~~e~~d~I 136 (716)
+|++++.. ...++ .+++.++..+...+|+..+..+++||....++|+++|||+|++ +. + .++
T Consensus 63 ~d~i~~~~-e~~~~-~~~~~le~~g~~~~~~~~~~~~~~dK~~~~~~l~~~gip~p~~--~~-~-----------~~~-- 124 (334)
T 2r85_A 63 NAVVVPTG-SFVAH-LGIELVENMKVPYFGNKRVLRWESDRNLERKWLKKAGIRVPEV--YE-D-----------PDD-- 124 (334)
T ss_dssp TEEECCCT-THHHH-HCHHHHHTCCSCBBSCTTHHHHHHSHHHHHHHHHHTTCCCCCB--CS-C-----------GGG--
T ss_pred CCEEEECc-chhhh-hHHHHHHHcCCCccCCHHHHHHHHhHHHHHHHHHHcCCCCCCc--cC-C-----------hHH--
Confidence 36665432 21122 2344556777667899999999999999999999999999998 32 1 111
Q ss_pred eecCeeecCcEEEeecccc-CcceeEEeccCCCChHHHHHhhhCCCcccccccccccccCcceEEeeccCCCCce-----
Q 005046 137 EVHGNRFWKPFVEKPVHGD-DHSIMIYYPSSAGGGMKELFRKVGNRSSEFHPDVRRVRREGSYIYEEFMPTGGTD----- 210 (716)
Q Consensus 137 ~v~G~~~~kPfVeKpv~Ge-dHni~IYyp~~~GgG~~rLfrkign~sS~~~p~~~~~r~~gsyIyQEFi~~~G~D----- 210 (716)
+..|+|+||..|. ..+|++..... -....++...+.. .| .....+|+||||+-.--+
T Consensus 125 ------l~~P~vvKP~~g~~s~Gv~~v~~~~---el~~~~~~~~~~~-~~-------~~~~~~lvee~i~G~e~~~~~~~ 187 (334)
T 2r85_A 125 ------IEKPVIVKPHGAKGGKGYFLAKDPE---DFWRKAEKFLGIK-RK-------EDLKNIQIQEYVLGVPVYPHYFY 187 (334)
T ss_dssp ------CCSCEEEEECC----TTCEEESSHH---HHHHHHHHHHCCC-SG-------GGCCSEEEEECCCCEEEEEEEEE
T ss_pred ------cCCCEEEEeCCCCCCCCEEEECCHH---HHHHHHHHHHhhc-cc-------CCCCcEEEEeccCCceeEEEEee
Confidence 2389999999985 22332222111 1111222211000 01 123679999999852112
Q ss_pred ------eEEEEECCceeEEEeecCCCCCCcee--------ecCCCCceee---eeeCC----HHHHHHHHHHHHHhc---
Q 005046 211 ------VKVYTVGPEYAHAEARKSPVVDGVVM--------RNPDGKEVRY---PVLLT----PNEKQMAREVCIAFR--- 266 (716)
Q Consensus 211 ------IKvytVG~~~vhAe~RKSPv~DG~vr--------rN~~gke~r~---pv~Lt----~eEk~iA~ka~kafg--- 266 (716)
+.++++++++... .+|.++ .|........ |..|+ ++-+++|.++++++|
T Consensus 188 ~~~~~~v~~~~~~g~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~g~~p~~l~~~~~~~i~~~a~~~~~~l~~~~ 260 (334)
T 2r85_A 188 SKVREELELMSIDRRYESN-------VDAIGRIPAKDQLEFDMDITYTVIGNIPIVLRESLLMDVIEAGERVVKAAEELM 260 (334)
T ss_dssp ETTTTEEEEEEEEEEEEEE-------GGGGGGSCHHHHTTSCCCCCEEEEEEEECCCCGGGHHHHHHHHHHHHHHHHHHS
T ss_pred cCcCceeeeeeeccEEEec-------cCcccccccccccccccCCceeeeCCCCcccCHHHHHHHHHHHHHHHHHHHhhc
Confidence 3333333333211 012111 0100001111 66666 677889999999996
Q ss_pred ---CceeeEeEEeeC-CCcEEEeccC
Q 005046 267 ---QAVCGFDLLRCE-GRSYVCDVNG 288 (716)
Q Consensus 267 ---q~VcGfDLLRs~-g~syV~DVNg 288 (716)
..++++|++.+. |++||+|||.
T Consensus 261 ~~~~G~~~vd~~~~~~g~~~viEiN~ 286 (334)
T 2r85_A 261 GGLWGPFCLEGVFTPDLEFVVFEISA 286 (334)
T ss_dssp SCCCEEEEEEEEECTTSCEEEEEEEC
T ss_pred ccccccEEEEEEECCCCCEEEEEEeC
Confidence 668999999885 6799999995
No 51
>3ouz_A Biotin carboxylase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta fold, cytosol, LIG; HET: MSE ADP SRT TLA; 1.90A {Campylobacter jejuni subsp} PDB: 3ouu_A*
Probab=99.21 E-value=1.6e-11 Score=131.62 Aligned_cols=198 Identities=17% Similarity=0.252 Sum_probs=124.7
Q ss_pred CcCeeeccccCCCcHHHHHHHHHhcCCcc-cCCchhhhHhhhHHHHHHHHHhCCCCCCcEE--EEecCCCccccccccCc
Q 005046 56 ICDCLIAFYSSGYPLEKAESYATLRKPFL-VNELEPQHLLHDRRKVYEQLEKYGIPVPRYA--LVNREVPYQELDYFIEE 132 (716)
Q Consensus 56 ~~D~lIsf~s~gfpl~kai~y~~lr~p~~-iNdl~~q~~l~DR~~~lqiL~~~gIP~P~t~--~~~r~~~~~~~~~~~e~ 132 (716)
.+|++++-|+.-.-.....+.++..+..+ -|+.++..+++||....++|+++|||+|++. .+.. .
T Consensus 78 ~~d~i~p~~g~~~e~~~~~~~~~~~g~~~~g~~~~~~~~~~dK~~~~~~l~~~Gip~p~~~~~~~~~------------~ 145 (446)
T 3ouz_A 78 EADAIFPGYGFLSENQNFVEICAKHNIKFIGPSVEAMNLMSDKSKAKQVMQRAGVPVIPGSDGALAG------------A 145 (446)
T ss_dssp TCSEEECCSSTTTTCHHHHHHHHHTTCEESSCCHHHHHHHHSHHHHHHHHHHTTCCBCSBCSSSCCS------------H
T ss_pred CcCEEEECCcccccCHHHHHHHHHCCCceECcCHHHHHHhCCHHHHHHHHHHcCCCcCCCcccCCCC------------H
Confidence 47899987642211134556666777554 4999999999999999999999999999986 3331 1
Q ss_pred cceeeecCeeecCcEEEeeccccCcceeEEeccCCCChHHHHHhhhCCCcccccccccccc-------cCcceEEeeccC
Q 005046 133 EDFVEVHGNRFWKPFVEKPVHGDDHSIMIYYPSSAGGGMKELFRKVGNRSSEFHPDVRRVR-------REGSYIYEEFMP 205 (716)
Q Consensus 133 ~d~I~v~G~~~~kPfVeKpv~GedHni~IYyp~~~GgG~~rLfrkign~sS~~~p~~~~~r-------~~gsyIyQEFi~ 205 (716)
++.... -..++.|+|+||..|. .|.|+. +++ +.. ++..-....+ .++.+|+||||+
T Consensus 146 ~e~~~~-~~~~g~PvvvKp~~g~-----------gg~Gv~-~v~---~~~-el~~~~~~~~~~~~~~~~~~~~lvEe~i~ 208 (446)
T 3ouz_A 146 EAAKKL-AKEIGYPVILKAAAGG-----------GGRGMR-VVE---NEK-DLEKAYWSAESEAMTAFGDGTMYMEKYIQ 208 (446)
T ss_dssp HHHHHH-HHHHCSSEEEEETTCC-----------TTCSEE-EEC---SGG-GHHHHHHHHHHHHHHHHSCCCEEEEECCS
T ss_pred HHHHHH-HHHhCCCEEEEECCCC-----------CCCCEE-EEC---CHH-HHHHHHHHHHHHHHHhcCCCCEEEEeCCC
Confidence 222211 1124599999999986 344443 222 111 1110000111 167899999998
Q ss_pred CCCceeEEEEECC---ceeEEEeecCCCCCCceee-cCCCCceeeee-eCCHH----HHHHHHHHHHHhcC-ceeeEeEE
Q 005046 206 TGGTDVKVYTVGP---EYAHAEARKSPVVDGVVMR-NPDGKEVRYPV-LLTPN----EKQMAREVCIAFRQ-AVCGFDLL 275 (716)
Q Consensus 206 ~~G~DIKvytVG~---~~vhAe~RKSPv~DG~vrr-N~~gke~r~pv-~Lt~e----Ek~iA~ka~kafgq-~VcGfDLL 275 (716)
- +.++.|.+++. .+++.-.|... +.+ +....+ ..|. .|+++ -.++|.++++++|. .+++||++
T Consensus 209 g-~~e~~v~v~~d~~g~~~~~~~~~~~-----~~~~~~~~~~-~~p~~~l~~~~~~~l~~~a~~~~~~lg~~G~~~ve~~ 281 (446)
T 3ouz_A 209 N-PRHIEVQVIGDSFGNVIHVGERDCS-----MQRRHQKLIE-ESPAILLDEKTRTRLHETAIKAAKAIGYEGAGTFEFL 281 (446)
T ss_dssp S-CEEEEEEEEECTTSCEEEEEEEEEE-----EEETTEEEEE-EESCTTSCHHHHHHHHHHHHHHHHHTTCCEEEEEEEE
T ss_pred C-CcEEEEEEEEcCCCCEEEEeeceee-----eeecCceEEE-ECCCCCCCHHHHHHHHHHHHHHHHHcCCCCceEEEEE
Confidence 5 36888888753 45665544321 111 111111 2244 46664 44689999999997 56789999
Q ss_pred eeC-CCcEEEeccCc
Q 005046 276 RCE-GRSYVCDVNGW 289 (716)
Q Consensus 276 Rs~-g~syV~DVNgw 289 (716)
.+. |++||+|||.-
T Consensus 282 ~~~~g~~~~iEiNpR 296 (446)
T 3ouz_A 282 VDKNLDFYFIEMNTR 296 (446)
T ss_dssp ECTTCCEEEEEEESS
T ss_pred EeCCCCEEEEEeECC
Confidence 987 48999999964
No 52
>1ulz_A Pyruvate carboxylase N-terminal domain; biotin carboxylase; 2.20A {Aquifex aeolicus} SCOP: b.84.2.1 c.30.1.1 d.142.1.2
Probab=99.20 E-value=1.5e-11 Score=131.60 Aligned_cols=197 Identities=17% Similarity=0.268 Sum_probs=123.9
Q ss_pred CcCeeeccccCCCcH-HHHHHHHHhcCC-cccCCchhhhHhhhHHHHHHHHHhCCCCCCcEE--EEecCCCccccccccC
Q 005046 56 ICDCLIAFYSSGYPL-EKAESYATLRKP-FLVNELEPQHLLHDRRKVYEQLEKYGIPVPRYA--LVNREVPYQELDYFIE 131 (716)
Q Consensus 56 ~~D~lIsf~s~gfpl-~kai~y~~lr~p-~~iNdl~~q~~l~DR~~~lqiL~~~gIP~P~t~--~~~r~~~~~~~~~~~e 131 (716)
.+|++++.|+. ++. ..+.+.++..+. +.-|+..+..+++||....++|+++|||+|++. .+...
T Consensus 73 ~~d~v~~~~g~-~~e~~~~~~~~~~~gi~~~g~~~~~~~~~~dK~~~k~~l~~~gip~p~~~~~~~~~~----------- 140 (451)
T 1ulz_A 73 GADAIHPGYGF-LAENAEFAKMCEEAGITFIGPHWKVIELMGDKARSKEVMKKAGVPVVPGSDGVLKSL----------- 140 (451)
T ss_dssp TCCEEECCSST-TTTCHHHHHHHHHTTCEESSSCHHHHHHHHSHHHHHHHHHHTTCCBCCBCSSSCCCH-----------
T ss_pred CCCEEEECCCc-cccCHHHHHHHHHCCCeEECcCHHHHHHhcCHHHHHHHHHHcCCCCCCCcccccCCH-----------
Confidence 47899887642 111 134556667775 455899999999999999999999999999986 34311
Q ss_pred ccceeeecCeeecCcEEEeeccccCcceeEEeccCCCChHHHHHhhhCCCcccccccccccc-------cCcceEEeecc
Q 005046 132 EEDFVEVHGNRFWKPFVEKPVHGDDHSIMIYYPSSAGGGMKELFRKVGNRSSEFHPDVRRVR-------REGSYIYEEFM 204 (716)
Q Consensus 132 ~~d~I~v~G~~~~kPfVeKpv~GedHni~IYyp~~~GgG~~rLfrkign~sS~~~p~~~~~r-------~~gsyIyQEFi 204 (716)
++....- ..++.|+|+||..|. .|.|+. +++ +.. ++..-+.... .++.+|+||||
T Consensus 141 -~~~~~~~-~~~g~PvvvKp~~g~-----------gg~Gv~-~v~---~~~-el~~~~~~~~~~~~~~~~~~~~lvEe~i 202 (451)
T 1ulz_A 141 -EEAKALA-REIGYPVLLKATAGG-----------GGRGIR-ICR---NEE-ELVKNYEQASREAEKAFGRGDLLLEKFI 202 (451)
T ss_dssp -HHHHHHH-HHHCSSEEEEECSSS-----------SCCSCE-EES---SHH-HHHHHHHHHHHHHHHTTSCCCEEEEECC
T ss_pred -HHHHHHH-HHcCCCEEEEECCCC-----------CCccEE-EeC---CHH-HHHHHHHHHHHHHHHhcCCCeEEEEEcc
Confidence 1222110 124589999999986 333442 111 110 0100000000 15689999999
Q ss_pred CCCCceeEEEEEC---CceeEEEeecCCCCCCceeecCCCC-ceeeeee-CCHH----HHHHHHHHHHHhcCc-eeeEeE
Q 005046 205 PTGGTDVKVYTVG---PEYAHAEARKSPVVDGVVMRNPDGK-EVRYPVL-LTPN----EKQMAREVCIAFRQA-VCGFDL 274 (716)
Q Consensus 205 ~~~G~DIKvytVG---~~~vhAe~RKSPv~DG~vrrN~~gk-e~r~pv~-Lt~e----Ek~iA~ka~kafgq~-VcGfDL 274 (716)
+- ++++.|.+++ +++++...|..+ +.++ |.+ ....|.. |+++ -+++|.++++++|.. +++||+
T Consensus 203 ~g-~~e~~v~v~~~~~G~~~~~~~~~~~-----~~~~-~~~~~~~~P~~~l~~~~~~~i~~~a~~~~~~lg~~G~~~ve~ 275 (451)
T 1ulz_A 203 EN-PKHIEYQVLGDKHGNVIHLGERDCS-----IQRR-NQKLVEIAPSLILTPEKREYYGNIVTKAAKEIGYYNAGTMEF 275 (451)
T ss_dssp CS-CEEEEEEEEECTTSCEEEEEEEEEE-----EEET-TEEEEEEESCSSCCHHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred cC-CeEEEEEEEEcCCCCEEEEeeeecc-----cccc-cccceeECCcccCCHHHHHHHHHHHHHHHHHcCCCcceEEEE
Confidence 74 4788888886 356666655432 1121 111 1112443 6653 467899999999976 788999
Q ss_pred EeeCC-CcEEEeccCc
Q 005046 275 LRCEG-RSYVCDVNGW 289 (716)
Q Consensus 275 LRs~g-~syV~DVNgw 289 (716)
+.+.+ .+||+|||.-
T Consensus 276 ~~~~~g~~~viEiN~R 291 (451)
T 1ulz_A 276 IADQEGNLYFIEMNTR 291 (451)
T ss_dssp EECTTCCEEEEEEECS
T ss_pred EEeCCCCEEEEEeeCC
Confidence 99854 5999999974
No 53
>2vpq_A Acetyl-COA carboxylase; bacteria, ATP-grAsp domain, biotin carboxylase, ligase; HET: ANP; 2.1A {Staphylococcus aureus}
Probab=99.16 E-value=2.8e-11 Score=129.45 Aligned_cols=201 Identities=14% Similarity=0.180 Sum_probs=124.2
Q ss_pred CCcCeeeccccCCCcHHHHHHHHHhcCCc-ccCCchhhhHhhhHHHHHHHHHhCCCCCCcEE--EEecCCCccccccccC
Q 005046 55 PICDCLIAFYSSGYPLEKAESYATLRKPF-LVNELEPQHLLHDRRKVYEQLEKYGIPVPRYA--LVNREVPYQELDYFIE 131 (716)
Q Consensus 55 P~~D~lIsf~s~gfpl~kai~y~~lr~p~-~iNdl~~q~~l~DR~~~lqiL~~~gIP~P~t~--~~~r~~~~~~~~~~~e 131 (716)
-.+|++++.|+.-.-...+.+.++..+.. .-++..+..+++||..+.++|+++|||+|++. .+..
T Consensus 72 ~~~d~v~~~~g~~~e~~~~~~~~~~~gi~~~g~~~~~~~~~~dK~~~k~~l~~~gip~p~~~~~~~~~------------ 139 (451)
T 2vpq_A 72 TGCDGVHPGYGFLAENADFAELCEACQLKFIGPSYQSIQKMGIKDVAKAEMIKANVPVVPGSDGLMKD------------ 139 (451)
T ss_dssp TTCSEEECCSSTTTTCHHHHHHHHTTTCEESSSCHHHHHHHHSHHHHHHHHHHTTCCBCSBCSSCBSC------------
T ss_pred cCCCEEEECCCccccCHHHHHHHHHcCCeEECCCHHHHHHhcCHHHHHHHHHHcCCCcCCCcccCcCC------------
Confidence 35899999865211012345666677754 55689999999999999999999999998865 4431
Q ss_pred ccceeeecCeeecCcEEEeeccccCcceeEEeccCCCChHHHHHhhhCCCcccccccccccc-------cCcceEEeecc
Q 005046 132 EEDFVEVHGNRFWKPFVEKPVHGDDHSIMIYYPSSAGGGMKELFRKVGNRSSEFHPDVRRVR-------REGSYIYEEFM 204 (716)
Q Consensus 132 ~~d~I~v~G~~~~kPfVeKpv~GedHni~IYyp~~~GgG~~rLfrkign~sS~~~p~~~~~r-------~~gsyIyQEFi 204 (716)
.++.... -..++.|+|+||..|. .|.|+. +++ +.. ++..-+.... .++.+|+||||
T Consensus 140 ~~~~~~~-~~~~g~PvvvKp~~g~-----------gg~Gv~-~v~---~~~-el~~~~~~~~~~~~~~~~~~~~lvEe~i 202 (451)
T 2vpq_A 140 VSEAKKI-AKKIGYPVIIKATAGG-----------GGKGIR-VAR---DEK-ELETGFRMTEQEAQTAFGNGGLYMEKFI 202 (451)
T ss_dssp HHHHHHH-HHHHCSSEEEEETTCC-----------TTCSEE-EES---SHH-HHHHHHHHHHHHHHHHHSCCCEEEEECC
T ss_pred HHHHHHH-HHhcCCcEEEEECCCC-----------CCCCEE-EeC---CHH-HHHHHHHHHHHHHHhhcCCCcEEEEEec
Confidence 1122211 0124589999999986 333432 111 110 1110000000 25789999999
Q ss_pred CCCCceeEEEEEC---CceeEEEeecCCCCCCceeecCCCCceeeeee-CCHH----HHHHHHHHHHHhcCc-eeeEeEE
Q 005046 205 PTGGTDVKVYTVG---PEYAHAEARKSPVVDGVVMRNPDGKEVRYPVL-LTPN----EKQMAREVCIAFRQA-VCGFDLL 275 (716)
Q Consensus 205 ~~~G~DIKvytVG---~~~vhAe~RKSPv~DG~vrrN~~gke~r~pv~-Lt~e----Ek~iA~ka~kafgq~-VcGfDLL 275 (716)
+- +.++.|-+++ +++++...|..+ +.++...-....|.. |+++ -+++|.++++++|.. ++++|++
T Consensus 203 ~g-~~e~~v~v~~~~~G~~~~~~~~~~~-----~~~~~~~~~~~~P~~~l~~~~~~~i~~~a~~~~~~lg~~G~~~ve~~ 276 (451)
T 2vpq_A 203 EN-FRHIEIQIVGDSYGNVIHLGERDCT-----IQRRMQKLVEEAPSPILDDETRREMGNAAVRAAKAVNYENAGTIEFI 276 (451)
T ss_dssp CS-EEEEEEEEEECTTSCEEEEEEEEEE-----EEETTEEEEEEESCTTCCHHHHHHHHHHHHHHHHHTTCCEEEEEEEE
T ss_pred CC-CeEEEEEEEEcCCCCEEEEeccccc-----hhccccceEEEcCCCCCCHHHHHHHHHHHHHHHHHcCCcceEEEEEE
Confidence 74 3688887775 356665544332 111111111123554 7764 467899999999976 6789999
Q ss_pred ee-C-CCcEEEeccCcc
Q 005046 276 RC-E-GRSYVCDVNGWS 290 (716)
Q Consensus 276 Rs-~-g~syV~DVNgwS 290 (716)
.+ . |++||+|||.-.
T Consensus 277 ~~~~~g~~~viEiN~R~ 293 (451)
T 2vpq_A 277 YDLNDNKFYFMEMNTRI 293 (451)
T ss_dssp EETTTTEEEEEEEECSC
T ss_pred EECCCCCEEEEEeeCCC
Confidence 98 5 459999999743
No 54
>2dzd_A Pyruvate carboxylase; biotin carboxylase, ligase; 2.40A {Geobacillus thermodenitrificans}
Probab=99.14 E-value=1.8e-11 Score=131.52 Aligned_cols=198 Identities=20% Similarity=0.237 Sum_probs=124.8
Q ss_pred CcCeeeccccCCCcH--HHHHHHHHhcCC-cccCCchhhhHhhhHHHHHHHHHhCCCCCCcEE--EEecCCCcccccccc
Q 005046 56 ICDCLIAFYSSGYPL--EKAESYATLRKP-FLVNELEPQHLLHDRRKVYEQLEKYGIPVPRYA--LVNREVPYQELDYFI 130 (716)
Q Consensus 56 ~~D~lIsf~s~gfpl--~kai~y~~lr~p-~~iNdl~~q~~l~DR~~~lqiL~~~gIP~P~t~--~~~r~~~~~~~~~~~ 130 (716)
.+|++++-+ ||.. ..+.+.++..+. +.-|+..+..+++||....++|+++|||+|++. .+..
T Consensus 79 ~id~v~~~~--g~~~E~~~~~~~~~~~gi~~~g~~~~~~~~~~dK~~~k~~l~~~Gip~p~~~~~~~~~----------- 145 (461)
T 2dzd_A 79 DVDAIHPGY--GFLSENIQFAKRCREEGIIFIGPNENHLDMFGDKVKARHAAVNAGIPVIPGSDGPVDG----------- 145 (461)
T ss_dssp TCCEEECCS--SSSTTCHHHHHHHHHTTCEESSCCHHHHHHTTSHHHHHHHHHHTTCCBCCBCSSCCSS-----------
T ss_pred CCCEEEECC--CccccCHHHHHHHHHcCCEEECCCHHHHHHhhCHHHHHHHHHHcCCCCCCCcccCcCC-----------
Confidence 478999876 3321 134455666675 566999999999999999999999999999986 3431
Q ss_pred CccceeeecCeeecCcEEEeeccccCcceeEEeccCCCChHHHHHhhhCCCcccccccccccc-------cCcceEEeec
Q 005046 131 EEEDFVEVHGNRFWKPFVEKPVHGDDHSIMIYYPSSAGGGMKELFRKVGNRSSEFHPDVRRVR-------REGSYIYEEF 203 (716)
Q Consensus 131 e~~d~I~v~G~~~~kPfVeKpv~GedHni~IYyp~~~GgG~~rLfrkign~sS~~~p~~~~~r-------~~gsyIyQEF 203 (716)
.++....- ..++.|+|+||..|. .|.|+. +++ +.. ++..-+.... .++.+|+|||
T Consensus 146 -~~~~~~~~-~~~g~PvvvKp~~g~-----------gg~Gv~-~v~---~~~-el~~~~~~~~~~~~~~~~~~~~lvEe~ 207 (461)
T 2dzd_A 146 -LEDVVAFA-EAHGYPIIIKAALGG-----------GGRGMR-IVR---SKS-EVKEAFERAKSEAKAAFGSDEVYVEKL 207 (461)
T ss_dssp -HHHHHHHH-HHHCSCEEEEESTTC-----------SSSSEE-EEC---CGG-GHHHHHHHHHHHHHHHTSCCCEEEEEC
T ss_pred -HHHHHHHH-HhcCCcEEEEeCCCC-----------CCCCEE-EeC---CHH-HHHHHHHHHHHHHHhhcCCCcEEEEEC
Confidence 12222110 124589999999985 333432 111 111 1110000000 1467999999
Q ss_pred cCCCCceeEEEEEC---CceeEEEeecCCCCCCceeecCCCCceeeee-eCCH----HHHHHHHHHHHHhcCcee-eEeE
Q 005046 204 MPTGGTDVKVYTVG---PEYAHAEARKSPVVDGVVMRNPDGKEVRYPV-LLTP----NEKQMAREVCIAFRQAVC-GFDL 274 (716)
Q Consensus 204 i~~~G~DIKvytVG---~~~vhAe~RKSPv~DG~vrrN~~gke~r~pv-~Lt~----eEk~iA~ka~kafgq~Vc-GfDL 274 (716)
|+- ++++.|-+++ +.+++...|..++ .+++..-.+. .|. .|++ +-+++|.++++++|..-+ ++|+
T Consensus 208 i~g-~~e~~v~v~~~~~G~~~~~~~~~~~~----~~~~~~~~~~-~P~~~l~~~~~~~i~~~a~~~~~~lg~~g~~~ve~ 281 (461)
T 2dzd_A 208 IEN-PKHIEVQILGDYEGNIVHLYERDCSV----QRRHQKVVEV-APSVSLSDELRQRICEAAVQLMRSVGYVNAGTVEF 281 (461)
T ss_dssp CCS-CEEEEEEEEECTTCCEEEEEEEEEEE----EETTEEEEEE-ESCTTSCHHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred CCC-CeEEEEEEEEcCCCCEEEEEeccccc----cccccceEEE-CCcccCCHHHHHHHHHHHHHHHHHcCCCcceEEEE
Confidence 974 4778887775 3467666664321 1211111111 233 4665 356799999999999754 5999
Q ss_pred EeeCCCcEEEeccCcc
Q 005046 275 LRCEGRSYVCDVNGWS 290 (716)
Q Consensus 275 LRs~g~syV~DVNgwS 290 (716)
+.+.+++||+|||.-.
T Consensus 282 ~~~~~~~~viEiN~R~ 297 (461)
T 2dzd_A 282 LVSGDEFYFIEVNPRI 297 (461)
T ss_dssp EEETTEEEEEEEESSC
T ss_pred EEeCCCEEEEEEECCC
Confidence 9998889999999743
No 55
>3n6r_A Propionyl-COA carboxylase, alpha subunit; protein complex, biotin-dependent carboxylase, ligase; HET: BTI; 3.20A {Ruegeria pomeroyi}
Probab=99.13 E-value=1.8e-10 Score=131.87 Aligned_cols=200 Identities=14% Similarity=0.137 Sum_probs=101.5
Q ss_pred CcCeeeccccCCCcHHHHHHHHHhcCCccc-CCchhhhHhhhHHHHHHHHHhCCCCCCcEE--EEecCCCccccccccCc
Q 005046 56 ICDCLIAFYSSGYPLEKAESYATLRKPFLV-NELEPQHLLHDRRKVYEQLEKYGIPVPRYA--LVNREVPYQELDYFIEE 132 (716)
Q Consensus 56 ~~D~lIsf~s~gfpl~kai~y~~lr~p~~i-Ndl~~q~~l~DR~~~lqiL~~~gIP~P~t~--~~~r~~~~~~~~~~~e~ 132 (716)
.+|++++-|+--.--....+.++..+...+ ++.++..++.||..+.++|+++|||+|++. .+. + .
T Consensus 74 ~~daI~pg~gflsE~~~~a~~le~~Gi~~iGp~~~ai~~~~dK~~~k~~l~~~GVPvpp~~~~~~~-s-----------~ 141 (681)
T 3n6r_A 74 GAQAVHPGYGFLSENSKFAEALEAEGVIFVGPPKGAIEAMGDKITSKKIAQEANVSTVPGYMGLIE-D-----------A 141 (681)
T ss_dssp CCSCCBCCSSSSTTCHHHHHHHHTTTCCCSSSCHHHHHHTTSHHHHHHHHHTTTCCCCCC--------------------
T ss_pred CcCEEEECCCccccCHHHHHHHHHcCCceECCCHHHHHHhCCHHHHHHHHHHcCcCcCCccccCcC-C-----------H
Confidence 378888876321111245566667765554 999999999999999999999999999975 332 1 1
Q ss_pred cceeeecCeeecCcEEEeeccccCcceeEEeccCCCChHHHHHhhhCCCcccccccccccc-------cCcceEEeeccC
Q 005046 133 EDFVEVHGNRFWKPFVEKPVHGDDHSIMIYYPSSAGGGMKELFRKVGNRSSEFHPDVRRVR-------REGSYIYEEFMP 205 (716)
Q Consensus 133 ~d~I~v~G~~~~kPfVeKpv~GedHni~IYyp~~~GgG~~rLfrkign~sS~~~p~~~~~r-------~~gsyIyQEFi~ 205 (716)
++.... -..++.|+|+||..|. .|.|++ +++....-...+. ..+ .++.+++||||+
T Consensus 142 ~e~~~~-a~~igyPvVvKp~~gg-----------ggkGv~-iv~~~~el~~a~~----~~~~ea~~~fg~~~vlvEe~I~ 204 (681)
T 3n6r_A 142 DEAVKI-SNQIGYPVMIKASAGG-----------GGKGMR-IAWNDQEAREGFQ----SSKNEAANSFGDDRIFIEKFVT 204 (681)
T ss_dssp ------------------------------------------------------------------------------CC
T ss_pred HHHHHH-HHhcCCcEEEEECCCC-----------CCCCEE-EECCHHHHHHHHH----HHHHHHHHhCCCCcEEEEeccC
Confidence 222221 1235699999999986 444553 5554332222222 111 256899999998
Q ss_pred CCCceeEEEEECC---ceeEEEeecCCCCCCceeecCCCCceeeeee-CCHHHH----HHHHHHHHHhcCc-eeeEeEEe
Q 005046 206 TGGTDVKVYTVGP---EYAHAEARKSPVVDGVVMRNPDGKEVRYPVL-LTPNEK----QMAREVCIAFRQA-VCGFDLLR 276 (716)
Q Consensus 206 ~~G~DIKvytVG~---~~vhAe~RKSPv~DG~vrrN~~gke~r~pv~-Lt~eEk----~iA~ka~kafgq~-VcGfDLLR 276 (716)
. ++++-|-++++ ++++...|... ..+++....+. .|.. |+++.+ ++|.++++++|.. ++.||++.
T Consensus 205 g-~rei~V~v~~d~~G~vv~l~~rd~s----~qr~~~k~~e~-~Pa~~l~~~~~~~l~~~a~~~~~alg~~G~~~vEf~~ 278 (681)
T 3n6r_A 205 Q-PRHIEIQVLCDSHGNGIYLGERECS----IQRRNQKVVEE-APSPFLDEATRRAMGEQAVALAKAVGYASAGTVEFIV 278 (681)
T ss_dssp S-CEEEEEEEECCSSSCCEEEEEEECC----CEETTEECEEE-ESCSSCCHHHHHHHHHHHHHHHHTTTCCSEEEEEEEE
T ss_pred C-CcEEEEEEEEeCCCCEEEEeeeecc----eeccCccEEEe-cCCCCCCHHHHHHHHHHHHHHHHHcCCCceEEEEEEE
Confidence 6 37888888874 66777777542 12232222222 2444 787665 7899999999985 77799999
Q ss_pred eCCC-cEEEeccCcc
Q 005046 277 CEGR-SYVCDVNGWS 290 (716)
Q Consensus 277 s~g~-syV~DVNgwS 290 (716)
+.++ +|++|||-=.
T Consensus 279 d~dg~~~~lEiNpR~ 293 (681)
T 3n6r_A 279 DGQKNFYFLEMNTRL 293 (681)
T ss_dssp CTTSCCCCCEEECSC
T ss_pred eCCCCEEEEeccccc
Confidence 8655 9999999643
No 56
>3vmm_A Alanine-anticapsin ligase BACD; ATP-grAsp domain, amino acid ligase, ATP binding; HET: ADP P0D; 2.50A {Bacillus subtilis}
Probab=99.08 E-value=3.2e-10 Score=124.29 Aligned_cols=206 Identities=13% Similarity=0.136 Sum_probs=122.7
Q ss_pred CcCeeeccccCCCcHHHHHHHHHhcCCcccCCchhhhHhhhHHHHHHHHHhCCCCCCcEEEEecCCCccccccccCccce
Q 005046 56 ICDCLIAFYSSGYPLEKAESYATLRKPFLVNELEPQHLLHDRRKVYEQLEKYGIPVPRYALVNREVPYQELDYFIEEEDF 135 (716)
Q Consensus 56 ~~D~lIsf~s~gfpl~kai~y~~lr~p~~iNdl~~q~~l~DR~~~lqiL~~~gIP~P~t~~~~r~~~~~~~~~~~e~~d~ 135 (716)
.+|+++++ +.. .+..+.+.++..+.. -++..+..++.||..+.++|+++|||+|++..+... ++.
T Consensus 102 ~id~Vip~-sE~-~l~~~a~~~e~~Gi~-g~~~~ai~~~~DK~~~k~~l~~~GIpvp~~~~v~s~------------ee~ 166 (474)
T 3vmm_A 102 GADAITTN-NEL-FIAPMAKACERLGLR-GAGVQAAENARDKNKMRDAFNKAGVKSIKNKRVTTL------------EDF 166 (474)
T ss_dssp TCSEEEES-CGG-GHHHHHHHHHHTTCC-CSCHHHHHHTTCHHHHHHHHHHTTSCCCCEEEECSH------------HHH
T ss_pred CCCEEEEC-Ccc-cHHHHHHHHHHcCCC-CCCHHHHHHhhCHHHHHHHHHHcCCCCCCeEEECCH------------HHH
Confidence 36888883 333 233355555666665 899999999999999999999999999999888632 122
Q ss_pred eeecCeeecCcEEEeecccc-CcceeEEeccCCCChHHHHHhhhCCCcccccccccccccCcceEEeeccCCCC------
Q 005046 136 VEVHGNRFWKPFVEKPVHGD-DHSIMIYYPSSAGGGMKELFRKVGNRSSEFHPDVRRVRREGSYIYEEFMPTGG------ 208 (716)
Q Consensus 136 I~v~G~~~~kPfVeKpv~Ge-dHni~IYyp~~~GgG~~rLfrkign~sS~~~p~~~~~r~~gsyIyQEFi~~~G------ 208 (716)
... -..++.|+|+||..|. ..++.+-..... ....++...+....+... ..+..++.+|+||||+-.-
T Consensus 167 ~~~-~~~lg~PvVVKP~~g~gg~Gv~iv~~~ee---l~~a~~~~~~~~~~~~~~-~a~~~~~~vlVEe~I~G~e~~~~q~ 241 (474)
T 3vmm_A 167 RAA-LEEIGTPLILKPTYLASSIGVTLITDTET---AEDEFNRVNDYLKSINVP-KAVTFEAPFIAEEFLQGEYGDWYQT 241 (474)
T ss_dssp HHH-HHHSCSSEEEEESSCCTTTTCEEECCTTS---HHHHHHHHHHHHTTSCCC-TTCCCSCSEEEEECCCBCHHHHCSS
T ss_pred HHH-HHHcCCCEEEEECCCCcCceEEEECCHHH---HHHHHHHHHHHHhhcccc-ccccCCCeEEEEeCCCCceeeeeec
Confidence 211 1234599999999985 122222111110 111221111000000000 0112357899999998421
Q ss_pred ------ceeEEEEECCcee--EEEeecCCCCCCceeecCCCCceeeeeeCCHH----HHHHHHHHHHHhcCceee--EeE
Q 005046 209 ------TDVKVYTVGPEYA--HAEARKSPVVDGVVMRNPDGKEVRYPVLLTPN----EKQMAREVCIAFRQAVCG--FDL 274 (716)
Q Consensus 209 ------~DIKvytVG~~~v--hAe~RKSPv~DG~vrrN~~gke~r~pv~Lt~e----Ek~iA~ka~kafgq~VcG--fDL 274 (716)
-.|.+++.+++.. +...|.. .+.+ . .-....|..|+++ -+++|.++++++|..-+| ||+
T Consensus 242 ~~~~~e~sv~~v~~dg~~~~v~i~~~~~---~~~~---~-~~~~~~Pa~l~~~~~~~l~~~a~~~~~alG~~g~~~~vef 314 (474)
T 3vmm_A 242 EGYSDYISIEGIMADGEYFPIAIHDKTP---QIGF---T-ETSHITPSILDEEAKKKIVEAAKKANEGLGLQNCATHTEI 314 (474)
T ss_dssp SSSCSEEEEEEEEETTEEEEEEEEEECC---CBTT---B-CCEEEESCCCCHHHHHHHHHHHHHHHHHHTCCSEEEEEEE
T ss_pred ccccceeEEEEEEECCeEEEEEEEeecc---CCCc---c-ceEEEECCCCCHHHHHHHHHHHHHHHHHcCCCCccEEEEE
Confidence 2466677777643 2223322 1111 1 1122346677775 556889999999998777 899
Q ss_pred EeeCCC-cEEEeccC
Q 005046 275 LRCEGR-SYVCDVNG 288 (716)
Q Consensus 275 LRs~g~-syV~DVNg 288 (716)
+.+.+| +||+|||.
T Consensus 315 ~~~~dg~~~~iEvNp 329 (474)
T 3vmm_A 315 KLMKNREPGLIESAA 329 (474)
T ss_dssp EEEGGGEEEEEEEES
T ss_pred EEcCCCCEEEEEEeC
Confidence 987554 99999994
No 57
>1a9x_A Carbamoyl phosphate synthetase (large chain); amidotransferase, thioester; HET: CYG ADP; 1.80A {Escherichia coli} SCOP: a.92.1.1 c.24.1.1 c.30.1.1 c.30.1.1 d.142.1.2 d.142.1.2 PDB: 1ce8_A* 1m6v_A* 1c30_A* 1bxr_A* 1c3o_A* 1cs0_A* 1jdb_B* 1kee_A* 1t36_A*
Probab=99.03 E-value=4.1e-10 Score=134.44 Aligned_cols=196 Identities=15% Similarity=0.137 Sum_probs=127.9
Q ss_pred CcCeeeccccCCCcHHHHHH-----HHHhcCCccc-CCchhhhHhhhHHHHHHHHHhCCCCCCcEEEEecCCCccccccc
Q 005046 56 ICDCLIAFYSSGYPLEKAES-----YATLRKPFLV-NELEPQHLLHDRRKVYEQLEKYGIPVPRYALVNREVPYQELDYF 129 (716)
Q Consensus 56 ~~D~lIsf~s~gfpl~kai~-----y~~lr~p~~i-Ndl~~q~~l~DR~~~lqiL~~~gIP~P~t~~~~r~~~~~~~~~~ 129 (716)
.+|++++.++....+.-+++ .++..+...+ |+.++...+.||....++|+++|||+|++..+...
T Consensus 82 ~~D~V~p~~g~~~~l~~~~~l~~~~~le~~gv~~~G~~~~ai~~~~DK~~~k~~l~~~Gipvp~~~~v~~~--------- 152 (1073)
T 1a9x_A 82 RPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADAIDKAEDRRRFDVAMKKIGLETARSGIAHTM--------- 152 (1073)
T ss_dssp CCSEEECSSSHHHHHHHHHHHHHTTHHHHHTCEECSSCHHHHHHHHSHHHHHHHHHHTTCCCCSEEEESSH---------
T ss_pred CCCEEEeccCCchHHHHHHHHHHhhHHHHcCCeeeCCCHHHHHHhhCHHHHHHHHHHCCcCCCCEEEECCH---------
Confidence 57999988764333432221 4556776555 99999999999999999999999999999988732
Q ss_pred cCccceeeecCeeecCcEEEeeccccCcceeEEeccCCCChHHHHHhhhCCCccccccccc---ccccCcceEEeeccCC
Q 005046 130 IEEEDFVEVHGNRFWKPFVEKPVHGDDHSIMIYYPSSAGGGMKELFRKVGNRSSEFHPDVR---RVRREGSYIYEEFMPT 206 (716)
Q Consensus 130 ~e~~d~I~v~G~~~~kPfVeKpv~GedHni~IYyp~~~GgG~~rLfrkign~sS~~~p~~~---~~r~~gsyIyQEFi~~ 206 (716)
++.... -..++.|+|+||..|. .|.|+. +++ |. .++..-.. ....++.+|+||||+-
T Consensus 153 ---~ea~~~-~~~ig~PvVvKp~~~~-----------Gg~Gv~-iv~---~~-eel~~~~~~~~~~~~~~~vlvEe~I~G 212 (1073)
T 1a9x_A 153 ---EEALAV-AADVGFPCIIRPSFTM-----------GGSGGG-IAY---NR-EEFEEICARGLDLSPTKELLIDESLIG 212 (1073)
T ss_dssp ---HHHHHH-HHHHCSSEEEEETTCC-----------TTTTCE-EES---SH-HHHHHHHHHHHHHCTTSCEEEEECCTT
T ss_pred ---HHHHHH-HHHcCCCEEEEECCCC-----------CCCceE-EeC---CH-HHHHHHHHHHHhhCCCCcEEEEEccCC
Confidence 222221 1234589999999874 233332 111 11 01110000 0113568999999983
Q ss_pred CCceeEEEEECCc---ee--EEEeecCCCCCCceeecCCCCcee--eee-eCCHH----HHHHHHHHHHHhcCc--eeeE
Q 005046 207 GGTDVKVYTVGPE---YA--HAEARKSPVVDGVVMRNPDGKEVR--YPV-LLTPN----EKQMAREVCIAFRQA--VCGF 272 (716)
Q Consensus 207 ~G~DIKvytVG~~---~v--hAe~RKSPv~DG~vrrN~~gke~r--~pv-~Lt~e----Ek~iA~ka~kafgq~--VcGf 272 (716)
...+.|-++++. ++ -.+.|-.| .| .|.|... .|. .||++ -+++|.++++++|.. +|+|
T Consensus 213 -~~E~~v~v~~d~~g~~v~~~~~e~~dp--~~-----v~~g~s~~~~Pa~~l~~~~~~~l~~~a~~i~~~lg~~~G~~~v 284 (1073)
T 1a9x_A 213 -WKEYEMEVVRDKNDNCIIVCSIENFDA--MG-----IHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNV 284 (1073)
T ss_dssp -SEEEEEEEEECTTCCEEEEEEEEESSC--TT-----SCGGGSCEEESCCSCCHHHHHHHHHHHHHHHHHHTCCSEEEEE
T ss_pred -CeEEEEEEEEeCCCCEEEEEEEecccC--Cc-----cccCcEEEEecCCCCCHHHHHHHHHHHHHHHHHcCcccCceEE
Confidence 268888888743 22 23445455 23 2323322 244 48874 467899999999997 9999
Q ss_pred eEEeeC--CCcEEEeccC
Q 005046 273 DLLRCE--GRSYVCDVNG 288 (716)
Q Consensus 273 DLLRs~--g~syV~DVNg 288 (716)
|++... |++||+|||-
T Consensus 285 df~~~~~~g~~~viEiNp 302 (1073)
T 1a9x_A 285 QFAVNPKNGRLIVIEMNP 302 (1073)
T ss_dssp EEEECTTTCCEEEEEEES
T ss_pred EEEEECCCCCEEEEEecC
Confidence 999984 6799999994
No 58
>3glk_A Acetyl-COA carboxylase 2; ATP binding, alternative splicing, ATP-binding, biotin, fatty acid biosynthesis, ligase, lipid synthesis, manganese; 2.10A {Homo sapiens} PDB: 3gid_A 2hjw_A 2yl2_A
Probab=99.02 E-value=7.1e-11 Score=131.86 Aligned_cols=211 Identities=14% Similarity=0.119 Sum_probs=120.3
Q ss_pred CcCeeeccccCCCcHHHHHHHHHhcCCccc-CCchhhhHhhhHHHHHHHHHhCCCCCCcEEE----EecCCC--------
Q 005046 56 ICDCLIAFYSSGYPLEKAESYATLRKPFLV-NELEPQHLLHDRRKVYEQLEKYGIPVPRYAL----VNREVP-------- 122 (716)
Q Consensus 56 ~~D~lIsf~s~gfpl~kai~y~~lr~p~~i-Ndl~~q~~l~DR~~~lqiL~~~gIP~P~t~~----~~r~~~-------- 122 (716)
.+|++++-|+.-.--....+.++..+...+ ++..+..++.||..+.++|+++|||+|++.. +...+.
T Consensus 123 ~~daI~pg~gflsE~~~~a~~le~~Gi~~iGp~~~ai~~~~DK~~~k~ll~~~GVPvp~~~~~~l~~~~~~~~~~~~~~~ 202 (540)
T 3glk_A 123 PVQAVWAGWGHASENPKLPELLCKNGVAFLGPPSEAMWALGDKIASTVVAQTLQVPTLPWSGSGLTVEWTEDDLQQGKRI 202 (540)
T ss_dssp TCSEEECCSSGGGGCTHHHHHHHHTTCEESSCCHHHHC---CHHHHHHHHHHTTCCBCCBTTTTCCCCCCCTTC----CC
T ss_pred CCCEEEeCCCccccCHHHHHHHHHcCCceeCCCHHHHHHhCCHHHHHHHHHHcCCCCCCccccccccccccccccccccc
Confidence 478888765421111233445567776665 9999999999999999999999999999754 000000
Q ss_pred --cccc---ccccCccceeeecCeeecCcEEEeeccccCcceeEEeccCCCChHHHHHhhhCCCcccccccccccc---c
Q 005046 123 --YQEL---DYFIEEEDFVEVHGNRFWKPFVEKPVHGDDHSIMIYYPSSAGGGMKELFRKVGNRSSEFHPDVRRVR---R 194 (716)
Q Consensus 123 --~~~~---~~~~e~~d~I~v~G~~~~kPfVeKpv~GedHni~IYyp~~~GgG~~rLfrkign~sS~~~p~~~~~r---~ 194 (716)
+.+. ....+.++.... -..++.|+|+||..|. .|-|+ +.+.+... +..-....+ .
T Consensus 203 ~~~~~~~~~~~v~s~~ea~~~-a~~igyPvVVKp~~gg-----------GG~Gv----~iv~~~~e-L~~a~~~~~~~~~ 265 (540)
T 3glk_A 203 SVPEDVYDKGCVKDVDEGLEA-AERIGFPLMIKASEGG-----------GGKGI----RKAESAED-FPILFRQVQSEIP 265 (540)
T ss_dssp CCCHHHHHHTSCCSHHHHHHH-HHHHCSSEEEEETTCC---------------E----EEECSTTT-HHHHHHHHHHHST
T ss_pred ccccccccccCcCCHHHHHHH-HHhcCCcEEEEECCCC-----------CCCCE----EEECCHHH-HHHHHHHHHhhcc
Confidence 0000 001111222221 1235699999999985 22232 22322211 111000111 2
Q ss_pred CcceEEeeccCCCCceeEEEEECC---ceeEEEeecCCCCCCceeecCCCCceeeeee-CCHH----HHHHHHHHHHHhc
Q 005046 195 EGSYIYEEFMPTGGTDVKVYTVGP---EYAHAEARKSPVVDGVVMRNPDGKEVRYPVL-LTPN----EKQMAREVCIAFR 266 (716)
Q Consensus 195 ~gsyIyQEFi~~~G~DIKvytVG~---~~vhAe~RKSPv~DG~vrrN~~gke~r~pv~-Lt~e----Ek~iA~ka~kafg 266 (716)
++.+++||||+- +..+-|-++++ .+++.-.|..- ..+++..--+. .|.. |+++ -.++|.++++++|
T Consensus 266 ~~~vlVEe~I~g-~rei~V~vl~d~~G~vv~l~~rd~s----~qr~~~k~ie~-~Pa~~l~~~~~~~l~~~a~~~~~alG 339 (540)
T 3glk_A 266 GSPIFLMKLAQH-ARHLEVQILADQYGNAVSLFGRDCS----IQRRHQKIVEE-APATIAPLAIFEFMEQCAIRLAKTVG 339 (540)
T ss_dssp TCCEEEEECCSS-EEEEEEEEEECTTSCEEEEEEEEEE----EC---CCSEEE-ESCTTSCHHHHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEEecCC-CcEEEEEEEEcCCCCEEEEeceeee----eeecccceEEe-cCCCCCCHHHHHHHHHHHHHHHHHcC
Confidence 678999999953 48888888874 56776555431 11222111111 2443 4553 4578999999999
Q ss_pred C-ceeeEeEEeeC-CCcEEEeccCc
Q 005046 267 Q-AVCGFDLLRCE-GRSYVCDVNGW 289 (716)
Q Consensus 267 q-~VcGfDLLRs~-g~syV~DVNgw 289 (716)
. .+++||++.+. |.+|++|||-=
T Consensus 340 ~~G~~~VEf~~d~dg~~~~lEiNpR 364 (540)
T 3glk_A 340 YVSAGTVEYLYSQDGSFHFLELNPR 364 (540)
T ss_dssp CCEEEEEEEEEETTSCEEEEEEECS
T ss_pred CccceEEEEEEcCCCCEEEEEEECC
Confidence 8 58889999875 55999999964
No 59
>3u9t_A MCC alpha, methylcrotonyl-COA carboxylase, alpha-subunit; biotin carboxylase, carboxyltransferase, BT domain, BCCP DOM ligase; 2.90A {Pseudomonas aeruginosa} PDB: 3u9s_A
Probab=99.01 E-value=1.6e-10 Score=132.01 Aligned_cols=202 Identities=14% Similarity=0.142 Sum_probs=124.1
Q ss_pred CcCeeeccccCCCcHHHHHHHHHhcCC-cccCCchhhhHhhhHHHHHHHHHhCCCCCCcEEEEecCCCccccccccCccc
Q 005046 56 ICDCLIAFYSSGYPLEKAESYATLRKP-FLVNELEPQHLLHDRRKVYEQLEKYGIPVPRYALVNREVPYQELDYFIEEED 134 (716)
Q Consensus 56 ~~D~lIsf~s~gfpl~kai~y~~lr~p-~~iNdl~~q~~l~DR~~~lqiL~~~gIP~P~t~~~~r~~~~~~~~~~~e~~d 134 (716)
.+|++++-|+--.-.....+.++..+. |.-++.++..+++||..+.++|+++|||+|++....-. +.++
T Consensus 100 ~~daI~pg~gflsE~~~~a~~le~~Gi~~iGp~~~ai~~~~DK~~~k~~l~~~GVpvpp~~~~~~~----------s~~e 169 (675)
T 3u9t_A 100 GAQAIHPGYGFLSENADFARACEEAGLLFLGPPAAAIDAMGSKSAAKALMEEAGVPLVPGYHGEAQ----------DLET 169 (675)
T ss_dssp TCSEEECCSSTTTTCHHHHHHHHTTTCEESSCCHHHHHHHTSHHHHHHHHHHTTCCBCCCCCSCCC----------CTTH
T ss_pred CcCEEEeCCcccccCHHHHHHHHHcCCceeCCCHHHHHHhchHHHHHHHHHHcCcCcCCccccCCC----------CHHH
Confidence 478898866321111345555666665 44589999999999999999999999999987542101 1122
Q ss_pred eeeecCeeecCcEEEeeccccCcceeEEeccCCCChHHHHHhhhCCCcccccccccccc-------cCcceEEeeccCCC
Q 005046 135 FVEVHGNRFWKPFVEKPVHGDDHSIMIYYPSSAGGGMKELFRKVGNRSSEFHPDVRRVR-------REGSYIYEEFMPTG 207 (716)
Q Consensus 135 ~I~v~G~~~~kPfVeKpv~GedHni~IYyp~~~GgG~~rLfrkign~sS~~~p~~~~~r-------~~gsyIyQEFi~~~ 207 (716)
.... -..++.|+|+||..|. .|.|++ + +.+... +..-+...+ .++.+|+||||+..
T Consensus 170 ~~~~-a~~igyPvvvKp~~G~-----------Gg~Gv~-i---v~~~~e-l~~a~~~~~~ea~~~fg~~~vlvEeyI~g~ 232 (675)
T 3u9t_A 170 FRRE-AGRIGYPVLLKAAAGG-----------GGKGMK-V---VEREAE-LAEALSSAQREAKAAFGDARMLVEKYLLKP 232 (675)
T ss_dssp HHHH-HHHSCSSBCCBCCC-----------------CC-C---BCCTTT-HHHHHSCCCC--------CCCBCCBCCSSC
T ss_pred HHHH-HHhCCCcEEEEECCCC-----------CCccEE-E---ECCHHH-HHHHHHHHHHHHHHhcCCCcEEEEeecCCC
Confidence 2221 1234599999999986 333432 3 322211 111111111 15689999999862
Q ss_pred CceeEEEEECC---ceeEEEeecCCCCCCceeecCCCCceeeeee-CCHHH----HHHHHHHHHHhcC-ceeeEeEEeeC
Q 005046 208 GTDVKVYTVGP---EYAHAEARKSPVVDGVVMRNPDGKEVRYPVL-LTPNE----KQMAREVCIAFRQ-AVCGFDLLRCE 278 (716)
Q Consensus 208 G~DIKvytVG~---~~vhAe~RKSPv~DG~vrrN~~gke~r~pv~-Lt~eE----k~iA~ka~kafgq-~VcGfDLLRs~ 278 (716)
+.+-|-++++ ++++...|...+. +++..-.+. .|.. |+++. .++|.++++++|. .+++||++.+.
T Consensus 233 -reiev~v~~d~~G~vv~l~~rd~s~q----r~~qk~ie~-~Pa~~l~~~~~~~l~~~a~~~~~alg~~G~~~vEf~~~~ 306 (675)
T 3u9t_A 233 -RHVEIQVFADRHGHCLYLNERDCSIQ----RRHQKVVEE-APAPGLGAELRRAMGEAAVRAAQAIGYVGAGTVEFLLDE 306 (675)
T ss_dssp -BCEEEEEEECSSSCEEEEEEEECCCB----SSSSBCEEE-ESCSSCCHHHHHHHHHHHHHHHHHTTCCSEEEEECCBCT
T ss_pred -cEEEEEEEEcCCCCEEEEecccccee----eccceEEEE-CCCCCCCHHHHHHHHHHHHHHHHHcCCccceEEEEEEcC
Confidence 6677766653 6788777755322 222211121 2443 67654 5689999999999 68999999886
Q ss_pred C-CcEEEeccCcc
Q 005046 279 G-RSYVCDVNGWS 290 (716)
Q Consensus 279 g-~syV~DVNgwS 290 (716)
+ .+|++|||.=.
T Consensus 307 dG~~~~iEiNpR~ 319 (675)
T 3u9t_A 307 RGQFFFMEMNTRL 319 (675)
T ss_dssp TSCBCBCEEESSC
T ss_pred CCCEEEEeccccc
Confidence 5 59999999654
No 60
>3jrx_A Acetyl-COA carboxylase 2; BC domain, soraphen A, alternative splicing, ATP-binding, biotin, fatty acid biosynthesis, ligase, lipid synthesis; HET: S1A; 2.50A {Homo sapiens} PDB: 3jrw_A*
Probab=99.01 E-value=1.3e-10 Score=131.22 Aligned_cols=212 Identities=12% Similarity=0.098 Sum_probs=127.1
Q ss_pred CcCeeeccccCCCcHHHHHHHHHhcCCccc-CCchhhhHhhhHHHHHHHHHhCCCCCCcEEE--E--ec------CC---
Q 005046 56 ICDCLIAFYSSGYPLEKAESYATLRKPFLV-NELEPQHLLHDRRKVYEQLEKYGIPVPRYAL--V--NR------EV--- 121 (716)
Q Consensus 56 ~~D~lIsf~s~gfpl~kai~y~~lr~p~~i-Ndl~~q~~l~DR~~~lqiL~~~gIP~P~t~~--~--~r------~~--- 121 (716)
.+|++++-|+.-.--....+.++..+...+ ++..+..++.||..+.++|+++|||+|++.. + .. .+
T Consensus 139 ~vdaV~pG~GflsEn~~~a~~le~~Gi~~iGp~~~ai~~~~DK~~ak~ll~~aGVPvpp~~~~~l~~~~~~~~~~~~~~~ 218 (587)
T 3jrx_A 139 PVQAVWAGWGHASENPKLPELLCKNGVAFLGPPSEAMWALGDKIASTVVAQTLQVPTLPWSGSGLTVEWTEDDLQQGKRI 218 (587)
T ss_dssp TCSEEECCSSTTTTCTHHHHHHHTTTCEESSCCHHHHHHHCSHHHHHHHHHHTTCCBCCBTTTTCCCCC------CCCCC
T ss_pred CCCEEEeCCCccccCHHHHHHHHHCCCCeeCCCHHHHHHhCCHHHHHHHHHHcCCCCCCeeccccccccccccccccccc
Confidence 478887776532222234455667776666 9999999999999999999999999999754 0 00 00
Q ss_pred -Ccccc---ccccCccceeeecCeeecCcEEEeeccccCcceeEEeccCCCChHHHHHhhhCCCccccccccccc---cc
Q 005046 122 -PYQEL---DYFIEEEDFVEVHGNRFWKPFVEKPVHGDDHSIMIYYPSSAGGGMKELFRKVGNRSSEFHPDVRRV---RR 194 (716)
Q Consensus 122 -~~~~~---~~~~e~~d~I~v~G~~~~kPfVeKpv~GedHni~IYyp~~~GgG~~rLfrkign~sS~~~p~~~~~---r~ 194 (716)
.+++. ....+.++.... -..++.|+|+||..|. .|-|++ + +.+.. ++..-.... ..
T Consensus 219 ~~~~~~~~~~~v~s~eea~~~-a~~iGyPvVVKp~~Gg-----------GGkGv~-i---V~s~e-EL~~a~~~a~~~~~ 281 (587)
T 3jrx_A 219 SVPEDVYDKGCVKDVDEGLEA-AERIGFPLMIKASEGG-----------GGKGIR-K---AESAE-DFPILFRQVQSEIP 281 (587)
T ss_dssp CCCHHHHHTTSCCSHHHHHHH-HHHHCSSEEEEETTCC-----------SSSSEE-E---ECSTT-THHHHHHHHHHHST
T ss_pred ccchhhccccccCCHHHHHHH-HHhcCCeEEEEeCCCC-----------CCCCeE-E---eCCHH-HHHHHHHHHHhhcc
Confidence 00000 001112222221 1245699999999985 333442 2 22211 111100011 12
Q ss_pred CcceEEeeccCCCCceeEEEEECC---ceeEEEeecCCCCCCceeecCCCCceeeeee-CCHH----HHHHHHHHHHHhc
Q 005046 195 EGSYIYEEFMPTGGTDVKVYTVGP---EYAHAEARKSPVVDGVVMRNPDGKEVRYPVL-LTPN----EKQMAREVCIAFR 266 (716)
Q Consensus 195 ~gsyIyQEFi~~~G~DIKvytVG~---~~vhAe~RKSPv~DG~vrrN~~gke~r~pv~-Lt~e----Ek~iA~ka~kafg 266 (716)
++.+++||||+- ++.+-|-++++ .+++.-.|..- ..+++..--+. .|.. |+++ -.++|.++++++|
T Consensus 282 ~~~vlVEeyI~g-~rei~V~vl~D~~G~vv~l~~rd~s----iqrr~qk~ie~-aPa~~l~~~~~~~i~~~A~~~a~alG 355 (587)
T 3jrx_A 282 GSPIFLMKLAQH-ARHLEVQILADQYGNAVSLFGRDCS----IQRRHQKIVEE-APATIAPLAIFEFMEQCAIRLAKTVG 355 (587)
T ss_dssp TCCEEEEECCCS-CEEEEEEEEECSSSCEEEEEEEEEE----EESSSCEEEEE-ESCCSSCHHHHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEEecCC-CcEEEEEEEEcCCCCEEEEeeeecc----ccccccceeEe-cCCCCCCHHHHHHHHHHHHHHHHHcC
Confidence 678999999964 48888888875 56666555321 12222111111 2443 5554 4578999999999
Q ss_pred C-ceeeEeEEeeC-CCcEEEeccCcc
Q 005046 267 Q-AVCGFDLLRCE-GRSYVCDVNGWS 290 (716)
Q Consensus 267 q-~VcGfDLLRs~-g~syV~DVNgwS 290 (716)
. .+++||++.+. |.+|++|||-=.
T Consensus 356 y~G~~~VEfl~d~dG~~yflEINpRl 381 (587)
T 3jrx_A 356 YVSAGTVEYLYSQDGSFHFLELNPRL 381 (587)
T ss_dssp CCEEEEEEEEECSSSCEEEEEEESSC
T ss_pred CcceeEEEEEEeCCCCEEEEEEeCCC
Confidence 8 58889999875 559999999643
No 61
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A*
Probab=98.99 E-value=1.6e-09 Score=130.59 Aligned_cols=200 Identities=17% Similarity=0.207 Sum_probs=98.1
Q ss_pred CcCeeeccccCCCcH--HHHHHHHHhcCC-cccCCchhhhHhhhHHHHHHHHHhCCCCCCcEE--EEecCCCcccccccc
Q 005046 56 ICDCLIAFYSSGYPL--EKAESYATLRKP-FLVNELEPQHLLHDRRKVYEQLEKYGIPVPRYA--LVNREVPYQELDYFI 130 (716)
Q Consensus 56 ~~D~lIsf~s~gfpl--~kai~y~~lr~p-~~iNdl~~q~~l~DR~~~lqiL~~~gIP~P~t~--~~~r~~~~~~~~~~~ 130 (716)
.+|++++-|+ |.. ..+.+.++..+. |+-++.++..+++||..+.++|+++|||+|++. .+..
T Consensus 93 ~iD~V~pg~g--~lsE~~~~a~~le~~Gi~~iGp~~~ai~~~~DK~~~k~~l~~~GIPvp~~~~~~v~s----------- 159 (1165)
T 2qf7_A 93 GADAIHPGYG--LLSESPEFVDACNKAGIIFIGPKADTMRQLGNKVAARNLAISVGVPVVPATEPLPDD----------- 159 (1165)
T ss_dssp TCSEEECCSS--TTTTCHHHHHHHHHTTCEESSCCHHHHHHHHSHHHHHHHHHHTTCCBC--------------------
T ss_pred CCCEEEECCC--chhcCHHHHHHHHHcCCceECCCHHHHHHHCCHHHHHHHHHHcCCCCCCeeCcCCCC-----------
Confidence 4788888663 221 234555666665 556899999999999999999999999999987 3431
Q ss_pred CccceeeecCeeecCcEEEeeccccCcceeEEeccCCCChHHHHHhhhCCCcccccccccccc---cCcceEEeeccCCC
Q 005046 131 EEEDFVEVHGNRFWKPFVEKPVHGDDHSIMIYYPSSAGGGMKELFRKVGNRSSEFHPDVRRVR---REGSYIYEEFMPTG 207 (716)
Q Consensus 131 e~~d~I~v~G~~~~kPfVeKpv~GedHni~IYyp~~~GgG~~rLfrkign~sS~~~p~~~~~r---~~gsyIyQEFi~~~ 207 (716)
.++.... -..++.|+|+||..|. .|-|+. +.+........+..-....+ .++.+++||||+.
T Consensus 160 -~eea~~~-a~~igyPvVVKp~~g~-----------GG~Gv~-iv~s~eEL~~a~~~~~~~a~~~fg~~~vlVEefI~g- 224 (1165)
T 2qf7_A 160 -MAEVAKM-AAAIGYPVMLKASWGG-----------GGRGMR-VIRSEADLAKEVTEAKREAMAAFGKDEVYLEKLVER- 224 (1165)
T ss_dssp --------------------------------------------------------------------------CCCSS-
T ss_pred -HHHHHHH-HHhcCCCEEEEeCCCC-----------CCCCEE-EECCHHHHHHHHHHHHHHHHhhcCCCcEEEEEeccC-
Confidence 1222221 1235699999999986 444553 44433222222221000000 2467999999974
Q ss_pred CceeEEEEECC---ceeEEEeecCCCCCCceeecCCCC-ceeeee-eCCHHH----HHHHHHHHHHhcCc-eeeEeEEee
Q 005046 208 GTDVKVYTVGP---EYAHAEARKSPVVDGVVMRNPDGK-EVRYPV-LLTPNE----KQMAREVCIAFRQA-VCGFDLLRC 277 (716)
Q Consensus 208 G~DIKvytVG~---~~vhAe~RKSPv~DG~vrrN~~gk-e~r~pv-~Lt~eE----k~iA~ka~kafgq~-VcGfDLLRs 277 (716)
|..+.|.++++ .+++...|.. .+.|+ +++ ....|. .|+++. .++|.++++++|.. +++||++.+
T Consensus 225 g~EisV~vl~D~~G~vv~l~~r~~-----s~~r~-~~~~~e~~Pa~~l~~~~~~~i~~~a~~i~~alg~~G~~~vEf~vd 298 (1165)
T 2qf7_A 225 ARHVESQILGDTHGNVVHLFERDC-----SVQRR-NQKVVERAPAPYLSEAQRQELAAYSLKIAGATNYIGAGTVEYLMD 298 (1165)
T ss_dssp EEEEEEEEEECTTSCEEEEEEEEE-----EEEET-TEEEEEEESCTTCCHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEE
T ss_pred CcEEEEEEEEcCCCcEEEEEeecc-----cceec-ccceEEecccccCCHHHHHHHHHHHHHHHHHcCCCcceeEEEEEE
Confidence 67888888875 3666655532 22222 122 112243 477643 57999999999986 678999998
Q ss_pred -C-CCcEEEeccCc
Q 005046 278 -E-GRSYVCDVNGW 289 (716)
Q Consensus 278 -~-g~syV~DVNgw 289 (716)
. |++||+|||.-
T Consensus 299 ~~dg~~~~iEiNpR 312 (1165)
T 2qf7_A 299 ADTGKFYFIEVNPR 312 (1165)
T ss_dssp TTTTEEEEEEEECS
T ss_pred CCCCCEEEEEEEcC
Confidence 5 55999999964
No 62
>1a9x_A Carbamoyl phosphate synthetase (large chain); amidotransferase, thioester; HET: CYG ADP; 1.80A {Escherichia coli} SCOP: a.92.1.1 c.24.1.1 c.30.1.1 c.30.1.1 d.142.1.2 d.142.1.2 PDB: 1ce8_A* 1m6v_A* 1c30_A* 1bxr_A* 1c3o_A* 1cs0_A* 1jdb_B* 1kee_A* 1t36_A*
Probab=98.97 E-value=1.8e-09 Score=128.92 Aligned_cols=199 Identities=15% Similarity=0.183 Sum_probs=120.1
Q ss_pred CcCeeeccccCCCcHHHHHHHHHhcCCc-ccCCchhhhHhhhHHHHHHHHHhCCCCCCcEEEEecCCCccccccccCccc
Q 005046 56 ICDCLIAFYSSGYPLEKAESYATLRKPF-LVNELEPQHLLHDRRKVYEQLEKYGIPVPRYALVNREVPYQELDYFIEEED 134 (716)
Q Consensus 56 ~~D~lIsf~s~gfpl~kai~y~~lr~p~-~iNdl~~q~~l~DR~~~lqiL~~~gIP~P~t~~~~r~~~~~~~~~~~e~~d 134 (716)
.+|.+|+.++.-.++ ...+.++..+.. .-|+..+..++.||.+..++|+++|||+|++..+... ++
T Consensus 634 ~~d~Vi~~~g~~~~~-~la~~Le~~Gi~i~G~~~~ai~~~~DK~~~~~ll~~~GIp~P~~~~~~s~------------ee 700 (1073)
T 1a9x_A 634 KPKGVIVQYGGQTPL-KLARALEAAGVPVIGTSPDAIDRAEDRERFQHAVERLKLKQPANATVTAI------------EM 700 (1073)
T ss_dssp CCSEEECSSSTHHHH-TTHHHHHHTTCCBCSSCHHHHHHHHSHHHHHHHHHHHTCCCCCEEECCSH------------HH
T ss_pred CcceEEeecCCchHH-HHHHHHHHCCCCeeCCCHHHHHHhhCHHHHHHHHHHcCcCCCCceEECCH------------HH
Confidence 468888876643343 444555667754 4499999999999999999999999999999988622 22
Q ss_pred eeeecCeeecCcEEEeecccc-CcceeEEeccCCCChHHHHHhhhCCCcccccccccccccCcceEEeeccCCC-CceeE
Q 005046 135 FVEVHGNRFWKPFVEKPVHGD-DHSIMIYYPSSAGGGMKELFRKVGNRSSEFHPDVRRVRREGSYIYEEFMPTG-GTDVK 212 (716)
Q Consensus 135 ~I~v~G~~~~kPfVeKpv~Ge-dHni~IYyp~~~GgG~~rLfrkign~sS~~~p~~~~~r~~gsyIyQEFi~~~-G~DIK 212 (716)
....- ..++.|+|+||..|. ..++.|-+.... ....++... ....+..+|+||||+.. --+|-
T Consensus 701 a~~~~-~~ig~PvvVKP~~~~gG~Gv~iv~~~~e---l~~~~~~a~-----------~~~~~~~vlvEefI~g~~E~~V~ 765 (1073)
T 1a9x_A 701 AVEKA-KEIGYPLVVRASYVLGGRAMEIVYDEAD---LRRYFQTAV-----------SVSNDAPVLLDHFLDDAVEVDVD 765 (1073)
T ss_dssp HHHHH-HHHCSSEEEEC-------CEEEECSHHH---HHHHHHHCC-------------------EEEBCCTTCEEEEEE
T ss_pred HHHHH-HHcCCCEEEEECCCCCCCCeEEECCHHH---HHHHHHHHH-----------hhCCCCcEEEEEccCCCcEEEEE
Confidence 22211 124599999999874 222332222110 111111110 11135679999999753 44555
Q ss_pred EEEECCc-eeEEEeecCCCCCCceeecCCCCceee--ee-eCCH----HHHHHHHHHHHHhcC-ceeeEeEEeeCCCcEE
Q 005046 213 VYTVGPE-YAHAEARKSPVVDGVVMRNPDGKEVRY--PV-LLTP----NEKQMAREVCIAFRQ-AVCGFDLLRCEGRSYV 283 (716)
Q Consensus 213 vytVG~~-~vhAe~RKSPv~DG~vrrN~~gke~r~--pv-~Lt~----eEk~iA~ka~kafgq-~VcGfDLLRs~g~syV 283 (716)
++.-|.. ++.+..+.- .+.+.|-|+... |. .|++ +-+++|.++++++|. .++++|++...+++||
T Consensus 766 ~l~d~~~v~~~~i~e~~------~~~g~~~gd~~~~~P~~~l~~~~~~~i~~~a~~i~~aLg~~G~~~vdf~v~~~~~~v 839 (1073)
T 1a9x_A 766 AICDGEMVLIGGIMEHI------EQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMNVQFAVKNNEVYL 839 (1073)
T ss_dssp EEECSSCEEEEEEEEES------SCTTSCGGGCCEEESCSSCCHHHHHHHHHHHHHHHHHTTCCEEEEEEEEECSSCEEE
T ss_pred EEEECCeEEEEeeEEEE------eccCCccCCceEEecCCCCCHHHHHHHHHHHHHHHHHcCCcceEEEEEEEECCeEEE
Confidence 5554543 344443321 122445444333 32 5665 567799999999999 8999999998889999
Q ss_pred EeccC
Q 005046 284 CDVNG 288 (716)
Q Consensus 284 ~DVNg 288 (716)
+|||-
T Consensus 840 iEvNp 844 (1073)
T 1a9x_A 840 IEVNP 844 (1073)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 99994
No 63
>1w96_A ACC, acetyl-coenzyme A carboxylase; ligase, obesity, diabetes, fatty acid metabolism, structure-based drug design; HET: S1A; 1.8A {Saccharomyces cerevisiae} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1w93_A
Probab=98.93 E-value=1.9e-10 Score=127.69 Aligned_cols=207 Identities=15% Similarity=0.155 Sum_probs=120.8
Q ss_pred CcCeeeccccC--CCcHHHHHHHHHhcC---CcccCCchhhhHhhhHHHHHHHHHhCCCCCCcEEEE-----ecCC----
Q 005046 56 ICDCLIAFYSS--GYPLEKAESYATLRK---PFLVNELEPQHLLHDRRKVYEQLEKYGIPVPRYALV-----NREV---- 121 (716)
Q Consensus 56 ~~D~lIsf~s~--gfpl~kai~y~~lr~---p~~iNdl~~q~~l~DR~~~lqiL~~~gIP~P~t~~~-----~r~~---- 121 (716)
.+|++++.++. -.+. ....++..+ ++.-++..+..+++||..+.++|+++|||+|++..+ ..+.
T Consensus 130 ~id~Vi~g~G~~sE~~~--~~~~l~~~g~~i~~~gp~~~a~~~~~dK~~~k~~l~~~GIp~p~~~~~~~~~~~~~~~~~l 207 (554)
T 1w96_A 130 DVDAVWAGWGHASENPL--LPEKLSQSKRKVIFIGPPGNAMRSLGDKISSTIVAQSAKVPCIPWSGTGVDTVHVDEKTGL 207 (554)
T ss_dssp TCSEEECCSSTTTTCTH--HHHHHHHSTTCCEESSCCHHHHHHSCSHHHHHHHHHHTTCCBCCBTTTTCCCCEECTTTCC
T ss_pred CCCEEEECCCccccCHH--HHHHHHHcCCeEEEeCCCHHHHHHHhCHHHHHHHHHHCCCCcCCccccccccccccccccc
Confidence 37999987632 1222 222344554 567788889999999999999999999999997543 0000
Q ss_pred --Ccccc---ccccCccceeeecCeeecCcEEEeeccccCcceeEEeccCCCChHHHHHhhhCCCccccccccccc---c
Q 005046 122 --PYQEL---DYFIEEEDFVEVHGNRFWKPFVEKPVHGDDHSIMIYYPSSAGGGMKELFRKVGNRSSEFHPDVRRV---R 193 (716)
Q Consensus 122 --~~~~~---~~~~e~~d~I~v~G~~~~kPfVeKpv~GedHni~IYyp~~~GgG~~rLfrkign~sS~~~p~~~~~---r 193 (716)
.+... ....+.++.... -..++.|+|+||..|. .|-|+. + +.+.. ++..-+... .
T Consensus 208 ~~ip~~~~~~~~~~~~~e~~~~-~~~~g~PvVvKp~~g~-----------gg~Gv~-~---v~~~~-el~~a~~~~~~~~ 270 (554)
T 1w96_A 208 VSVDDDIYQKGCCTSPEDGLQK-AKRIGFPVMIKASEGG-----------GGKGIR-Q---VEREE-DFIALYHQAANEI 270 (554)
T ss_dssp EECCHHHHGGGSCSSHHHHHHH-HHHHCSSEEEEETTCC-----------TTTTEE-E---ECSHH-HHHHHHHHHHHHS
T ss_pred cccccccccccCCCCHHHHHHH-HHHcCCCEEEEECCCC-----------CCceEE-E---ECCHH-HHHHHHHHHHhhc
Confidence 00000 000011222221 1134589999999985 333432 1 11111 111000001 1
Q ss_pred cCcceEEeeccCCCCceeEEEEECC---ceeEEEeecCCCCCCceeecCCCCce-eeeee-CCH----HHHHHHHHHHHH
Q 005046 194 REGSYIYEEFMPTGGTDVKVYTVGP---EYAHAEARKSPVVDGVVMRNPDGKEV-RYPVL-LTP----NEKQMAREVCIA 264 (716)
Q Consensus 194 ~~gsyIyQEFi~~~G~DIKvytVG~---~~vhAe~RKSPv~DG~vrrN~~gke~-r~pv~-Lt~----eEk~iA~ka~ka 264 (716)
.++.+|+||||+. |..+-|.++++ ++++...|...+.+ + |.+-+ -.|.. +++ +-+++|.+++++
T Consensus 271 ~~~~vlvEe~i~g-~~e~sv~vl~d~~G~vv~l~~~~~~~~~----~--~~k~~~~~P~~~l~~~~~~~i~~~a~~~~~a 343 (554)
T 1w96_A 271 PGSPIFIMKLAGR-ARHLEVQLLADQYGTNISLFGRDCSVQR----R--HQKIIEEAPVTIAKAETFHEMEKAAVRLGKL 343 (554)
T ss_dssp TTCCEEEEECCCS-CEEEEEEEEECTTSCEEEEEEEEEEEEE----T--TEEEEEEESCCSSCHHHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEEecCC-CcEEEEEEEEcCCCCEEEEeeeeeeeEe----e--ccceeeeCCCcCCCHHHHHHHHHHHHHHHHH
Confidence 2578999999984 57888877764 45554444221111 1 01100 12333 554 457789999999
Q ss_pred hcC-ceeeEeEEee-C-CCcEEEeccC
Q 005046 265 FRQ-AVCGFDLLRC-E-GRSYVCDVNG 288 (716)
Q Consensus 265 fgq-~VcGfDLLRs-~-g~syV~DVNg 288 (716)
+|. .+++||++.+ . |++||+|||.
T Consensus 344 lg~~G~~~ve~~~~~~dg~~~~iEiN~ 370 (554)
T 1w96_A 344 VGYVSAGTVEYLYSHDDGKFYFLELNP 370 (554)
T ss_dssp HTCCEEEEEEEEECTTTCCEEEEEEEC
T ss_pred cCCcceEEEEEEEECCCCCEEEEEeeC
Confidence 998 7999999986 4 6799999996
No 64
>3va7_A KLLA0E08119P; carboxylase, ligase; HET: BTI; 2.60A {Kluyveromyces lactis}
Probab=98.93 E-value=2.6e-09 Score=129.39 Aligned_cols=200 Identities=15% Similarity=0.190 Sum_probs=94.4
Q ss_pred CcCeeeccccCCCcH--HHHHHHHHhcCCcc-cCCchhhhHhhhHHHHHHHHHhCCCCCCcE-EEEecCCCccccccccC
Q 005046 56 ICDCLIAFYSSGYPL--EKAESYATLRKPFL-VNELEPQHLLHDRRKVYEQLEKYGIPVPRY-ALVNREVPYQELDYFIE 131 (716)
Q Consensus 56 ~~D~lIsf~s~gfpl--~kai~y~~lr~p~~-iNdl~~q~~l~DR~~~lqiL~~~gIP~P~t-~~~~r~~~~~~~~~~~e 131 (716)
.+|++++-| ||-. ..+.+.++..+... -++.++..+++||..+.++|+++|||+|+. ..+. +
T Consensus 103 ~iDaI~pg~--g~lsEn~~~a~~le~~Gi~~iGps~eai~~~~DK~~ak~ll~~aGIPvpp~~~~v~-s----------- 168 (1236)
T 3va7_A 103 GAQAIIPGY--GFLSENADFSDRCSQENIVFVGPSGDAIRKLGLKHSAREIAERAKVPLVPGSGLIK-D----------- 168 (1236)
T ss_dssp TCSEEECCS--SGGGGCHHHHHHHHTTTCEESSCCHHHHHHHHSTTHHHHHHHHTTCCCCC-------------------
T ss_pred CCCEEEECC--ccccccHHHHHHHHHCCCCeeCCCHHHHHHhcCHHHHHHHHHHcCCCCCCeeEecC-C-----------
Confidence 389999977 4322 23455666666554 499999999999999999999999999884 3333 1
Q ss_pred ccceeeecCeeecCcEEEeeccccCcceeEEeccCCCChHHHHHhhhCCCccccccccc---ccccCcceEEeeccCCCC
Q 005046 132 EEDFVEVHGNRFWKPFVEKPVHGDDHSIMIYYPSSAGGGMKELFRKVGNRSSEFHPDVR---RVRREGSYIYEEFMPTGG 208 (716)
Q Consensus 132 ~~d~I~v~G~~~~kPfVeKpv~GedHni~IYyp~~~GgG~~rLfrkign~sS~~~p~~~---~~r~~gsyIyQEFi~~~G 208 (716)
.++.... -..++.|+|+||..|. .|-|+. +++........++.-.. ....++.+|+||||+- +
T Consensus 169 ~eea~~~-a~~iGyPvVVKP~~Gg-----------GGkGV~-iv~s~eEL~~a~~~~~~~a~~~~~~~~vlVEeyI~G-~ 234 (1236)
T 3va7_A 169 AKEAKEV-AKKLEYPVMVKSTAGG-----------GGIGLQ-KVDSEDDIERVFETVQHQGKSYFGDAGVFMERFVNN-A 234 (1236)
T ss_dssp -----------------------------------------------------------------------------C-C
T ss_pred HHHHHHH-HHHcCCCEEEEeCCCC-----------CCCCEE-EECCHHHHHHHHHHHHHHHHhccCCCcEEEeeccCC-C
Confidence 1222221 1235699999999986 455654 55443322222221000 0013567999999975 5
Q ss_pred ceeEEEEECC---ceeEEEeecCCCCCCceeecCCCCceeeee-eCCHH----HHHHHHHHHHHhcCc-eeeEeEEeeC-
Q 005046 209 TDVKVYTVGP---EYAHAEARKSPVVDGVVMRNPDGKEVRYPV-LLTPN----EKQMAREVCIAFRQA-VCGFDLLRCE- 278 (716)
Q Consensus 209 ~DIKvytVG~---~~vhAe~RKSPv~DG~vrrN~~gke~r~pv-~Lt~e----Ek~iA~ka~kafgq~-VcGfDLLRs~- 278 (716)
..+-|.++++ .+++.-.|..- ..+++..-.+. .|. .|+++ -.++|.++++++|.. +++||++.+.
T Consensus 235 rEisV~vl~Dg~g~vv~l~~rd~s----~qr~~~k~~e~-~Pa~~l~~~~~~~l~~~a~~~~~alg~~G~~~VEfivd~d 309 (1236)
T 3va7_A 235 RHVEIQMMGDGFGKAIAIGERDCS----LQRRNQKVIEE-TPAPNLPEATRAKMRAASERLGSLLKYKCAGTVEFIYDEQ 309 (1236)
T ss_dssp EEEEEEEEEESSSCEEEEEEEEEE----EEETTEEEEEE-ESCSSCCHHHHHHHHHHHHHHHHHTTCEEEEEEEEEEETT
T ss_pred eEEEEEEEecCCceEEEEeeeeee----eeecCcceEEE-cCCCCCCHHHHHHHHHHHHHHHHHcCCcceEEEEEEEECC
Confidence 7888888864 45665555321 11112111111 244 36664 357889999999995 9999999985
Q ss_pred -CCcEEEeccC
Q 005046 279 -GRSYVCDVNG 288 (716)
Q Consensus 279 -g~syV~DVNg 288 (716)
+++||+|||-
T Consensus 310 ~g~~y~iEINp 320 (1236)
T 3va7_A 310 RDEFYFLEVNA 320 (1236)
T ss_dssp TTEEEEEEEEC
T ss_pred CCcEEEEEEEC
Confidence 6899999996
No 65
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A*
Probab=98.92 E-value=1.8e-09 Score=129.95 Aligned_cols=198 Identities=19% Similarity=0.222 Sum_probs=120.6
Q ss_pred CcCeeeccccCCCcHHHHHHHHHhcCC-cccCCchhhhHhhhHHHHHHHHHhCCCCCCcEE--EEecCCCccccccccCc
Q 005046 56 ICDCLIAFYSSGYPLEKAESYATLRKP-FLVNELEPQHLLHDRRKVYEQLEKYGIPVPRYA--LVNREVPYQELDYFIEE 132 (716)
Q Consensus 56 ~~D~lIsf~s~gfpl~kai~y~~lr~p-~~iNdl~~q~~l~DR~~~lqiL~~~gIP~P~t~--~~~r~~~~~~~~~~~e~ 132 (716)
.+|++++-|+.-.-.....+.++..+. |.-++.++..+++||..+.++|+++|||+|++. .+... + +.
T Consensus 77 ~~DaI~pg~gflsE~~~~a~~le~~Gi~~iGp~~eai~~~~DK~~~r~ll~~aGIPvpp~~~~~v~s~---e------ea 147 (1150)
T 3hbl_A 77 NVDAIHPGYGFLSENEQFARRCAEEGIKFIGPHLEHLDMFGDKVKARTTAIKADLPVIPGTDGPIKSY---E------LA 147 (1150)
T ss_dssp TCSEEECTTTTSTTCHHHHHHHHHTTCEESSSCHHHHHHHHSHHHHHHHHHHTTCCBCCBCSSCBCSS---S------TT
T ss_pred CCCEEEECCCcccccHHHHHHHHHCCCCeeCCCHHHHHHhCCHHHHHHHHHHcCcCCCCccccCCCCH---H------HH
Confidence 478999876531111234555667775 445999999999999999999999999999987 33311 0 11
Q ss_pred cceeeecCeeecCcEEEeeccccCcceeEEeccCCCChHHHHHhhhCCCcccccccccccc-------cCcceEEeeccC
Q 005046 133 EDFVEVHGNRFWKPFVEKPVHGDDHSIMIYYPSSAGGGMKELFRKVGNRSSEFHPDVRRVR-------REGSYIYEEFMP 205 (716)
Q Consensus 133 ~d~I~v~G~~~~kPfVeKpv~GedHni~IYyp~~~GgG~~rLfrkign~sS~~~p~~~~~r-------~~gsyIyQEFi~ 205 (716)
.... ..++.|+|+||..|. .|-|+ +.+.+... +..-....+ .++.+++||||+
T Consensus 148 ~~~a----~~iGyPvVVKP~~Gg-----------Gg~Gv----~vv~s~ee-L~~a~~~a~~~a~~~fg~~~vlVEeyI~ 207 (1150)
T 3hbl_A 148 KEFA----EEAGFPLMIKATSGG-----------GGKGM----RIVREESE-LEDAFHRAKSEAEKSFGNSEVYIERYID 207 (1150)
T ss_dssp TTTG----GGTCSSEEEECCC----------------------CEECCSSS-CTHHHHSSSSSCC------CBEEECCCS
T ss_pred HHHH----HHcCCCEEEEeCCCC-----------CCCCE----EEECCHHH-HHHHHHHHHHHHHhhcCCCcEEEEEccC
Confidence 1112 234599999999885 33333 23333221 111111111 157899999997
Q ss_pred CCCceeEEEEECC---ceeEEEeecCCCCCCceeec-CCCCceeeee-eCCHH----HHHHHHHHHHHhcCc-eeeEeEE
Q 005046 206 TGGTDVKVYTVGP---EYAHAEARKSPVVDGVVMRN-PDGKEVRYPV-LLTPN----EKQMAREVCIAFRQA-VCGFDLL 275 (716)
Q Consensus 206 ~~G~DIKvytVG~---~~vhAe~RKSPv~DG~vrrN-~~gke~r~pv-~Lt~e----Ek~iA~ka~kafgq~-VcGfDLL 275 (716)
- .+.+-|-++|+ .++|...|... +.++ ....+. .|. .|+++ -.++|.++++++|.. ++.||++
T Consensus 208 G-~reieV~vl~d~~G~vv~l~er~~s-----~qr~~~k~~e~-~Pa~~l~~~~~~~l~~~a~~~~~alG~~G~~~vEfl 280 (1150)
T 3hbl_A 208 N-PKHIEVQVIGDEHGNIVHLFERDCS-----VQRRHQKVVEV-APSVGLSPTLRQRICDAAIQLMENIKYVNAGTVEFL 280 (1150)
T ss_dssp S-CEEEEEEEEECSSSCEEEEEEEEEE-----EESSSCEEEEE-SSCSSCCHHHHHHHHHHHHHHHHHTTCCEEEEEEEE
T ss_pred C-CcEEEEEEEEeCCCCEEEEEeeccc-----eeccCceeEEe-cCCCCCCHHHHHHHHHHHHHHHHHcCCCceEEEEEE
Confidence 4 36777777754 56776666432 2221 111122 233 46664 457899999999964 5669999
Q ss_pred eeCCCcEEEeccCc
Q 005046 276 RCEGRSYVCDVNGW 289 (716)
Q Consensus 276 Rs~g~syV~DVNgw 289 (716)
.+.+++|++|||-=
T Consensus 281 vd~d~~y~iEINpR 294 (1150)
T 3hbl_A 281 VSGDEFFFIEVNPR 294 (1150)
T ss_dssp EETTEEEEEEEECS
T ss_pred EECCeEEEEEEeCC
Confidence 98889999999964
No 66
>2pbz_A Hypothetical protein; NYSGXRC, PSI-II, IMP biosynthesis, ATP binding protein, PURP structural genomics, protein structure initiative; HET: ATP; 2.50A {Thermococcus kodakarensis} SCOP: c.30.1.8 d.142.1.9
Probab=98.53 E-value=5.3e-07 Score=95.00 Aligned_cols=170 Identities=14% Similarity=0.075 Sum_probs=90.2
Q ss_pred HhcCCcccCCchhhhHhhhHHHHHHHHHhCCCCCCcEEEEecCCCccccccccCccceeeecCeeecCcEEEeeccccCc
Q 005046 78 TLRKPFLVNELEPQHLLHDRRKVYEQLEKYGIPVPRYALVNREVPYQELDYFIEEEDFVEVHGNRFWKPFVEKPVHGDDH 157 (716)
Q Consensus 78 ~lr~p~~iNdl~~q~~l~DR~~~lqiL~~~gIP~P~t~~~~r~~~~~~~~~~~e~~d~I~v~G~~~~kPfVeKpv~GedH 157 (716)
+..+..+.-+..+.....||..-.+.|+++|||+|++. . + + |. .++.|+|+||..|.
T Consensus 80 e~~~~p~~p~~~~l~~~~dr~~~~~~l~~~Gip~P~~~--~-~---e---------e~------~i~~PviVKp~~g~-- 136 (320)
T 2pbz_A 80 EKAKARFFGNRRFLKWETTFELQDKALEGAGIPRVEVV--E-P---E---------DA------KPDELYFVRIEGPR-- 136 (320)
T ss_dssp HTCCSCCBSCSSGGGGGSCHHHHHHHHHHHTCCBCCBC--C-S---C---------CC------CSSCCEEEECC-----
T ss_pred HHcCCCcCCCHHHHHHHHhHHHHHHHHHHCCcCCCCee--C-H---h---------Hc------CcCCcEEEEECCCC--
Confidence 45555566777888899999888899999999999986 1 1 1 11 25699999999996
Q ss_pred ceeEEeccCCCChHHHHHhhhCCCcccccccccccccCcceEEeeccCC-CCceeEEEEE--CCceeEEEeecCCCCCCc
Q 005046 158 SIMIYYPSSAGGGMKELFRKVGNRSSEFHPDVRRVRREGSYIYEEFMPT-GGTDVKVYTV--GPEYAHAEARKSPVVDGV 234 (716)
Q Consensus 158 ni~IYyp~~~GgG~~rLfrkign~sS~~~p~~~~~r~~gsyIyQEFi~~-~G~DIKvytV--G~~~vhAe~RKSPv~DG~ 234 (716)
.|-|.. +.+ | .++....... .+.+|+||||+. .......|-+ |.-.+-...++--..||.
T Consensus 137 ---------ggkG~~-~v~---~--eel~~~~~~~--~~~~IiEEfI~g~~~~~~~f~~~~~g~~e~~~~~~r~e~~~g~ 199 (320)
T 2pbz_A 137 ---------GGSGHF-IVE---G--SELEERLSTL--EEPYRVERFIPGVYLYVHFFYSPILERLELLGVDERVLIADGN 199 (320)
T ss_dssp ----------------------C--EECSCCCC------CCEEEECCCSCEEEEEEEEETTTTEEEEEEEEEEEETTCSS
T ss_pred ---------CCCCEE-EEC---h--HHHHHHHHhc--CCCEEEEeeeceEecceeEEeccccCceeEEEecceEEEECCe
Confidence 344543 333 3 2333211011 267999999984 2111111110 000000011110003555
Q ss_pred eee-cCCCCcee---eeeeCC----HHHHHHHHHHHHHhc-------CceeeEeEEeeCCCcEEEeccC
Q 005046 235 VMR-NPDGKEVR---YPVLLT----PNEKQMAREVCIAFR-------QAVCGFDLLRCEGRSYVCDVNG 288 (716)
Q Consensus 235 vrr-N~~gke~r---~pv~Lt----~eEk~iA~ka~kafg-------q~VcGfDLLRs~g~syV~DVNg 288 (716)
.+- +...--+- .|..++ ++-.++|.+++++++ ..+.++| +...++.||+|||.
T Consensus 200 ~~~p~~~~~~~~~G~~P~~~~~~~~~~a~~~a~~i~~~L~~l~~~g~~G~~~vE-~~~dg~~~v~EIap 267 (320)
T 2pbz_A 200 ARWPVKPLPYTIVGNRAIALRESLLPQLYDYGLAFVRTMRELEPPGVIGPFALH-FAYDGSFKAIGIAS 267 (320)
T ss_dssp SSSCCSCCCCCEEEEEECEECGGGHHHHHHHHHHHHHHHHHHSTTCCCSEEEEE-EECSSSCEEEEEES
T ss_pred eecccCCCceeeecCCCCccCHHHHHHHHHHHHHHHHHHHhhccCCceeeEEEE-EcCCCcEEEEEecC
Confidence 433 11100000 155544 567789999999983 4566889 65557899999985
No 67
>2r7k_A 5-formaminoimidazole-4-carboxamide-1-(beta)-D- ribofuranosyl 5'-monophosphate synthetase...; ATP-grAsp superfamily, ATP-binding; HET: ACP AMZ; 2.10A {Methanocaldococcus jannaschii} SCOP: c.30.1.8 d.142.1.9 PDB: 2r7l_A* 2r7m_A* 2r7n_A*
Probab=98.12 E-value=4.8e-06 Score=88.84 Aligned_cols=178 Identities=15% Similarity=0.118 Sum_probs=93.6
Q ss_pred hcCCcccCCchhhhHhhhHHHHHHHHHhCCCCCCcEEEEecCCCccccccccCccceeeecCeeecCcEEEeecccc-Cc
Q 005046 79 LRKPFLVNELEPQHLLHDRRKVYEQLEKYGIPVPRYALVNREVPYQELDYFIEEEDFVEVHGNRFWKPFVEKPVHGD-DH 157 (716)
Q Consensus 79 lr~p~~iNdl~~q~~l~DR~~~lqiL~~~gIP~P~t~~~~r~~~~~~~~~~~e~~d~I~v~G~~~~kPfVeKpv~Ge-dH 157 (716)
..+..+.-+-.+..+..||....+.|+++|||||++ +. + .++. ..|+|+||..+. .+
T Consensus 107 ~~g~~v~g~~~a~~~e~~k~~~k~~l~~~GIptp~~--~~-~-----------~~e~--------~~PvVVK~~~~a~Gk 164 (361)
T 2r7k_A 107 SFLVPMFGNRRILRWESERSLEGKLLREAGLRVPKK--YE-S-----------PEDI--------DGTVIVKFPGARGGR 164 (361)
T ss_dssp TCCSCBBSCGGGGGTTTCHHHHHHHHHHTTCCCCCE--ES-S-----------GGGC--------CSCEEEECSCCCC--
T ss_pred HcCCCcCCCHHHHHHhhhHHHHHHHHHHcCcCCCCE--eC-C-----------HHHc--------CCCEEEeeCCCCCCC
Confidence 556555556677777888988889999999999976 22 1 1111 279999999875 23
Q ss_pred ceeEEeccCCCChHHHHHhhhCCCcccccccccccccCcceEEeeccCC-CCceeEEEEE-CCc-eeEEEeec--CCCCC
Q 005046 158 SIMIYYPSSAGGGMKELFRKVGNRSSEFHPDVRRVRREGSYIYEEFMPT-GGTDVKVYTV-GPE-YAHAEARK--SPVVD 232 (716)
Q Consensus 158 ni~IYyp~~~GgG~~rLfrkign~sS~~~p~~~~~r~~gsyIyQEFi~~-~G~DIKvytV-G~~-~vhAe~RK--SPv~D 232 (716)
+++|--.... ....++..-.. ..+.. ..+..+|.||||.. .......|-+ +++ .+-.+.++ +. .|
T Consensus 165 Gv~v~~s~ee---~~~a~~~~~~~-~~~~~-----~~~~~viIEEfl~G~e~s~~~f~~~~~~~~e~~~id~r~~~~-~d 234 (361)
T 2r7k_A 165 GYFIASSTEE---FYKKAEDLKKR-GILTD-----EDIANAHIEEYVVGTNFCIHYFYSPLKDEVELLGMDKRYESN-ID 234 (361)
T ss_dssp -EEEESSHHH---HHHHHHHHHHT-TSCCH-----HHHHHCEEEECCCSEEEEEEEEEETTTTEEEEEEEEEEEEEE-HH
T ss_pred CEEEECCHHH---HHHHHHHHHhc-ccccc-----CCCCeEEEEeccceEEeeEEEEecccCCeeEEEEecceEEee-cc
Confidence 3333322111 11111111000 00000 11246999999984 1111112221 110 01111111 10 12
Q ss_pred Ccee----ec-CCCCceee------eeeCC----HHHHHHHHHHHHHhc-------CceeeEeEEeeCC-CcEEEeccC
Q 005046 233 GVVM----RN-PDGKEVRY------PVLLT----PNEKQMAREVCIAFR-------QAVCGFDLLRCEG-RSYVCDVNG 288 (716)
Q Consensus 233 G~vr----rN-~~gke~r~------pv~Lt----~eEk~iA~ka~kafg-------q~VcGfDLLRs~g-~syV~DVNg 288 (716)
|..+ .. ..+.+..+ |..|+ ++-.++|.++++++| -.+.++++.-+.+ +.||+|||.
T Consensus 235 gi~~~~~~~~~~~~~~p~~v~~G~~Pa~l~~~~~~~a~~~a~~v~~al~~~~~~~~~G~~~vE~fvt~dg~i~V~EIap 313 (361)
T 2r7k_A 235 GLVRIPAKDQLEMNINPSYVITGNIPVVIRESLLPQVFEMGDKLVAKAKELVPPGMIGPFCLQSLCNENLELVVFEMSA 313 (361)
T ss_dssp HHTTSCHHHHHTCCCCCCEEEEEEEECCCCGGGHHHHHHHHHHHHHHHHHHSTTCCCEEEEEEEEECTTSCEEEEEEES
T ss_pred cceecchhhhhcccCCCceEEecCcCCcCCHHHHHHHHHHHHHHHHHHHhhccCCccceEEEEEEEcCCCCEEEEEEcC
Confidence 2221 00 01111112 66665 567789999999984 6677899987764 589999985
No 68
>1nd6_A Prostatic acid phosphatase; PAP, prostate, phosphate, inhibi hydrolase; HET: NAG MAN 1PE; 2.40A {Homo sapiens} SCOP: c.60.1.2 PDB: 1nd5_A* 2hpa_A* 1cvi_A* 1rpa_A* 1rpt_A* 2l3h_A 2l77_A 2l79_A
Probab=98.09 E-value=7.1e-06 Score=84.75 Aligned_cols=54 Identities=26% Similarity=0.405 Sum_probs=44.3
Q ss_pred ccccch------HHHHHHHhccchhhhhhcCCCCCCcchhhhcccc-cccceEeecCchhHHHHHHHHHHhhhcccC
Q 005046 478 GQFIDF------LIEQFYQDNGVNEIAYWWGSHSEGTGLLRLHSTY-RHDLKIYSSDEGRVQMSAAAFAKGLLDLEG 547 (716)
Q Consensus 478 GelT~~------~lG~~fR~~~~~~~~~~~~Yp~~~~gLlrlhst~-rhdlkIysSdEgRVq~tAaafakg~L~leg 547 (716)
|+||.. +||+.||+ - |+ +|| ...| ..++.|+||+-.|+.+||++|+.||..-.|
T Consensus 36 g~LT~~G~~q~~~lG~~lr~-r---------Y~----~ll--~~~~~~~~v~vrst~~~Rt~~SA~~fl~Gl~p~~~ 96 (354)
T 1nd6_A 36 GQLTQLGMEQHYELGEYIRK-R---------YR----KFL--NESYKHEQVYIRSTDVDRTLMSAMTNLAALFPPEG 96 (354)
T ss_dssp TCBCHHHHHHHHHHHHHHHH-H---------TT----TTT--CSSCCGGGEEEEEESCHHHHHHHHHHHHHHSCCCG
T ss_pred chhHHHHHHHHHHHHHHHHH-H---------HH----HHh--ccccCcCeEEEEECCchHHHHHHHHHHHhcCCCCC
Confidence 899987 99999999 5 75 344 3444 357999999999999999999999996543
No 69
>1dkq_A Phytase; histidine acid phosphatase fold, hydrolase; HET: IHP; 2.05A {Escherichia coli} SCOP: c.60.1.2 PDB: 1dkp_A* 1dkm_A 1dkn_A 1dko_A 1dkl_A
Probab=97.97 E-value=1.2e-05 Score=86.25 Aligned_cols=55 Identities=20% Similarity=0.247 Sum_probs=45.2
Q ss_pred Cccccch------HHHHHHHhccchhhhhhcCCCCCCcchhhhccccc---ccceEeecCchhHHHHHHHHHHhhhcc
Q 005046 477 SGQFIDF------LIEQFYQDNGVNEIAYWWGSHSEGTGLLRLHSTYR---HDLKIYSSDEGRVQMSAAAFAKGLLDL 545 (716)
Q Consensus 477 GGelT~~------~lG~~fR~~~~~~~~~~~~Yp~~~~gLlrlhst~r---hdlkIysSdEgRVq~tAaafakg~L~l 545 (716)
.|+||.. +||+.+|+. |. ..||| ...|. +++.|+||+-.|+.+||++|+.||.--
T Consensus 44 ~g~LT~~G~~~~~~lG~~lr~r----------y~--~~~ll--~~~~~p~~~~v~v~st~~~RT~~SA~~~l~GlfP~ 107 (410)
T 1dkq_A 44 LGWLTPRGGELIAYLGHYQRQR----------LV--ADGLL--AKKGCPQSGQVAIIADVDERTRKTGEAFAAGLAPD 107 (410)
T ss_dssp TTCBCHHHHHHHHHHHHHHHHH----------HH--HTTSS--CSSSCCCTTTEEEEECSSHHHHHHHHHHHHHHSTT
T ss_pred CCccchHHHHHHHHHHHHHHHH----------HH--hcCCC--ccccCCCcceEEEEeCCcHHHHHHHHHHHhhcCCC
Confidence 5899988 999999994 42 12554 66663 789999999999999999999999854
No 70
>2wnh_A 3-phytase; histidine acid phosphatase, hydrolase; 1.68A {Klebsiella pneumoniae} PDB: 2wni_A 2wu0_A
Probab=97.68 E-value=4.9e-05 Score=81.75 Aligned_cols=57 Identities=18% Similarity=0.179 Sum_probs=44.6
Q ss_pred Cccccch------HHHHHHHhccchhhhhhcCCCCCCcchhhhcc-ccc-ccceEeecCchhHHHHHHHHHHhhhcccC
Q 005046 477 SGQFIDF------LIEQFYQDNGVNEIAYWWGSHSEGTGLLRLHS-TYR-HDLKIYSSDEGRVQMSAAAFAKGLLDLEG 547 (716)
Q Consensus 477 GGelT~~------~lG~~fR~~~~~~~~~~~~Yp~~~~gLlrlhs-t~r-hdlkIysSdEgRVq~tAaafakg~L~leg 547 (716)
.|+||.. ++|+.||+ - |+. .+|| .. .|- .++.++||+-.|+++||++|+.||..-.+
T Consensus 53 ~g~LT~~G~~q~~~lG~~lr~-r---------Y~~--~~ll--~~~~~~~~~v~~rst~~~Rt~~Sa~~fl~Gl~p~~~ 117 (418)
T 2wnh_A 53 DGELTGHGYAAVVNKGREEGQ-H---------YRQ--LGLL--QAGCPTAESIYVRASPLQRTRATAQALVDGAFPGCG 117 (418)
T ss_dssp TTSCCHHHHHHHHHHHHHHHH-H---------HHH--TTSS--CSSSCCTTTEEEEECSSHHHHHHHHHHHHHHSTTCC
T ss_pred cCccChhHHHHHHHHHHHHHH-H---------HHh--cCCc--ccCCCCCCeEEEEECCCHHHHHHHHHHHHHcCCCCC
Confidence 5799987 99999999 4 542 2444 23 244 57999999999999999999999986543
No 71
>2cqy_A Propionyl-COA carboxylase alpha chain, mitochondrial; PCCA, B domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.59 E-value=1.1e-07 Score=81.67 Aligned_cols=103 Identities=13% Similarity=0.098 Sum_probs=56.2
Q ss_pred hHhhhHHHHHHHHHhCCCCCCcEE--EEecCCCccccccccCccceeeecCeeecCcEEEeeccccCcceeEEeccCCCC
Q 005046 92 HLLHDRRKVYEQLEKYGIPVPRYA--LVNREVPYQELDYFIEEEDFVEVHGNRFWKPFVEKPVHGDDHSIMIYYPSSAGG 169 (716)
Q Consensus 92 ~~l~DR~~~lqiL~~~gIP~P~t~--~~~r~~~~~~~~~~~e~~d~I~v~G~~~~kPfVeKpv~GedHni~IYyp~~~Gg 169 (716)
.+++||..+.++|+++|||+|++. .+... ++.... ...++.|+|+||.+|. ....++.-.+.-
T Consensus 4 ~~~~dK~~~~~~l~~~gip~p~~~~~~~~~~------------~~~~~~-~~~~~~P~vvKp~~~~-~~~gv~~v~~~~- 68 (108)
T 2cqy_A 4 GSSGDKIESKLLAKKAEVNTIPGFDGVVKDA------------EEAVRI-AREIGYPVMIKASAGG-GGKGMRIAWDDE- 68 (108)
T ss_dssp CCCCCCCCSTTCCCSSCCCCCSCCCSCBSSH------------HHHHHH-HHHHCSSEEEEETTSC-CTTTCEEESSHH-
T ss_pred hhhcCHHHHHHHHHHcCCCCCCCcccccCCH------------HHHHHH-HHhcCCCEEEEECCCC-CCccEEEeCCHH-
Confidence 467888899999999999999986 44411 122111 1234599999999985 111111111100
Q ss_pred hHHHHHhhhCCCcccccccccccccCcceEEeeccCCCCceeEEEEEC
Q 005046 170 GMKELFRKVGNRSSEFHPDVRRVRREGSYIYEEFMPTGGTDVKVYTVG 217 (716)
Q Consensus 170 G~~rLfrkign~sS~~~p~~~~~r~~gsyIyQEFi~~~G~DIKvytVG 217 (716)
-....++.+..... ....+..+|+||||+- ..++.|-+||
T Consensus 69 el~~~~~~~~~~~~-------~~~~~~~~lvee~i~g-~~E~~v~v~g 108 (108)
T 2cqy_A 69 ETRDGFRLSSQEAA-------SSFGDDRLLIEKFIDN-PRHISGPSSG 108 (108)
T ss_dssp HHHHHHHHHHHHHH-------HHTSSCCEEEEECCSS-SSCCCSCCCC
T ss_pred HHHHHHHHHHHHHH-------hhcCCCcEEEeeccCC-CcEEEEEecC
Confidence 01111111100000 0001467999999974 3577777665
No 72
>1wr2_A Hypothetical protein PH1789; structural genomics, NPPSFA, national on protein structural and functional analyses; 2.00A {Pyrococcus horikoshii}
Probab=97.37 E-value=8.5e-06 Score=80.93 Aligned_cols=101 Identities=17% Similarity=0.200 Sum_probs=58.8
Q ss_pred hhhHHHHHHHHHhCCCCCCcEEEEecCCCccccccccCccceeeecCeeecCcEEEeeccc-cCcceeEEeccCCCChHH
Q 005046 94 LHDRRKVYEQLEKYGIPVPRYALVNREVPYQELDYFIEEEDFVEVHGNRFWKPFVEKPVHG-DDHSIMIYYPSSAGGGMK 172 (716)
Q Consensus 94 l~DR~~~lqiL~~~gIP~P~t~~~~r~~~~~~~~~~~e~~d~I~v~G~~~~kPfVeKpv~G-edHni~IYyp~~~GgG~~ 172 (716)
..|+..+.++|+++|||+|++.++... ++.... -..++.|+|+||.++ .-| .+.|||+.
T Consensus 19 ~l~k~~~k~ll~~~GIp~p~~~~~~~~------------~ea~~~-a~~lg~PvvvKp~~~~~~~-------r~~~gGv~ 78 (238)
T 1wr2_A 19 AMVEYEAKQVLKAYGLPVPEEKLAKTL------------DEALEY-AKEIGYPVVLKLMSPQILH-------KSDAKVVM 78 (238)
T ss_dssp EECHHHHHHHHHTTTCCCCCCEEESSH------------HHHHHH-HHHHCSSEEEEEECTTCCC-------HHHHTCEE
T ss_pred CCCHHHHHHHHHHcCcCCCCeEEeCCH------------HHHHHH-HHHhCCCEEEEEccCCCCc-------CCccCCEE
Confidence 458899999999999999999988632 122221 123569999999997 211 11344543
Q ss_pred HHHhhhCCCccccccccccc----------ccCcceEEeeccCCCCceeEEEEECCc
Q 005046 173 ELFRKVGNRSSEFHPDVRRV----------RREGSYIYEEFMPTGGTDVKVYTVGPE 219 (716)
Q Consensus 173 rLfrkign~sS~~~p~~~~~----------r~~gsyIyQEFi~~~G~DIKvytVG~~ 219 (716)
+ .+.+... ...-.... .....+|+|||++ .|..+-|-++++.
T Consensus 79 -~--~v~~~~e-l~~a~~~~~~~~~~~~~~~~~~~vlVEe~i~-~g~E~~v~v~~d~ 130 (238)
T 1wr2_A 79 -L--NIKNEEE-LKKKWEEIHENAKKYRPDAEILGVLVAPMLK-PGREVIIGVTEDP 130 (238)
T ss_dssp -E--EECSHHH-HHHHHHHHHHHHHHHCTTCCCCEEEEEECCC-CCEEEEEEEEEET
T ss_pred -E--eCCCHHH-HHHHHHHHHHhhhhhCCCCccceEEEEECCC-CCeEEEEEEEeCC
Confidence 2 1111111 00000000 0135799999998 4667766666544
No 73
>2gfi_A Phytase; hydrolase; HET: NAG; 2.29A {Debaryomyces castellii}
Probab=95.75 E-value=0.011 Score=64.33 Aligned_cols=57 Identities=18% Similarity=0.323 Sum_probs=42.6
Q ss_pred HHHHHHHhccchhhhhhcCCCCCCcchhhhcccccccceEeecCchhHHHHHHHHHHhhhcccCCCCcceeeeEe
Q 005046 484 LIEQFYQDNGVNEIAYWWGSHSEGTGLLRLHSTYRHDLKIYSSDEGRVQMSAAAFAKGLLDLEGQLTPILVSLVS 558 (716)
Q Consensus 484 ~lG~~fR~~~~~~~~~~~~Yp~~~~gLlrlhst~rhdlkIysSdEgRVq~tAaafakg~L~legeLtPilv~~V~ 558 (716)
+||+.||+ - || +|| .. ...+.|+||+-.||.+||++|+.||+.......|+-+..+.
T Consensus 139 ~lG~~lr~-r---------Y~----~ll--~~--~~~v~vrST~~~Rti~SA~~fl~Glfp~~~~~~~~~~~ii~ 195 (458)
T 2gfi_A 139 KHGIAFRT-K---------YG----ELF--DT--NDTLPVFTSNSGRVYQTSQYFARGFMGDDFSNDTVKTNIIS 195 (458)
T ss_dssp HHHHHHHH-H---------HG----GGC--CT--TSCEEEEEESBHHHHHHHHHHHHHHHGGGCSTTTEEEEEEC
T ss_pred HHHHHHHH-H---------hH----Hhc--Cc--CCceEEEecCCchHHHHHHHHHHhccCCCcccCCcceEEee
Confidence 99999999 5 64 344 22 46789999999999999999999999876442234333443
No 74
>3it3_A Acid phosphatase; HAP, hydrolase; HET: 3AM; 1.50A {Francisella tularensis subsp} PDB: 4e3w_A 2glc_A 2glb_A 2gla_A 3it0_A* 3it1_A* 3it2_A 2p36_A*
Probab=95.74 E-value=0.0077 Score=63.31 Aligned_cols=58 Identities=19% Similarity=0.230 Sum_probs=46.4
Q ss_pred ccccch------HHHHHHHhccchhhhhhcCCCCCCcchhhhcccc-cccceEeecCchhHHHHHHHHHHhhhcccCC
Q 005046 478 GQFIDF------LIEQFYQDNGVNEIAYWWGSHSEGTGLLRLHSTY-RHDLKIYSSDEGRVQMSAAAFAKGLLDLEGQ 548 (716)
Q Consensus 478 GelT~~------~lG~~fR~~~~~~~~~~~~Yp~~~~gLlrlhst~-rhdlkIysSdEgRVq~tAaafakg~L~lege 548 (716)
|+||.. +||+.||+ . |-. ..||| ..+| .+++.++||+..|+++||++|+.||..-.+.
T Consensus 38 g~LT~~G~~q~~~lG~~lr~-~---------Yv~-~~~~l--~~~~~~~~v~~rst~~~Rt~~Sa~~~l~Gl~p~~~~ 102 (342)
T 3it3_A 38 SELTPIGMNQEYNLGLQLRK-R---------YID-KFGLL--PEHYVDQSIYVLSSHTNRTVVSAQSLLMGLYPAGTG 102 (342)
T ss_dssp TCBCHHHHHHHHHHHHHHHH-H---------HTT-TSCSS--CSSCCTTSEEEEECSSHHHHHHHHHHHHHHSCTTSS
T ss_pred HhhhHHHHHHHHHHHHHHHH-H---------Hhh-ccccc--cccccCceEEEEECCChHHHHHHHHHHHHhCCCCCC
Confidence 889987 99999999 4 521 12454 3445 5799999999999999999999999987663
No 75
>1qfx_A Protein (PH 2.5 acid phosphatase); phosphomonoesterase, hydrolase; HET: NAG BMA MAN; 2.40A {Aspergillus niger} SCOP: c.60.1.2
Probab=95.34 E-value=0.0098 Score=64.94 Aligned_cols=52 Identities=19% Similarity=0.195 Sum_probs=43.3
Q ss_pred Cccccc----h------HHHHHHHhccchhhhhhcCCCCCCcchhhhcccccccceEeecCchhHHHHHHHHHHhhhccc
Q 005046 477 SGQFID----F------LIEQFYQDNGVNEIAYWWGSHSEGTGLLRLHSTYRHDLKIYSSDEGRVQMSAAAFAKGLLDLE 546 (716)
Q Consensus 477 GGelT~----~------~lG~~fR~~~~~~~~~~~~Yp~~~~gLlrlhst~rhdlkIysSdEgRVq~tAaafakg~L~le 546 (716)
+|+||. . +||+.||+ - || +|| .. ...+.|+||+-.||.+||++|+.||...+
T Consensus 111 ~g~LT~~~~~~G~~q~~~lG~~lr~-r---------Y~----~ll--~~--~~~v~vrST~~~Rti~SA~~fl~Glf~~~ 172 (460)
T 1qfx_A 111 YNAETTSGPYAGLLDAYNHGNDYKA-R---------YG----HLW--NG--ETVVPFFSSGYGRVIETARKFGEGFFGYN 172 (460)
T ss_dssp TTSBCCSSTTCHHHHHHHHHHHHHH-H---------HG----GGC--CS--SSCEEEEEESBHHHHHHHHHHHHHHHGGG
T ss_pred cchhccCCcCCcHHHHHHHHHHHHH-H---------hH----HHh--CC--CCceEEEECCCcHHHHHHHHHHHHhcCCc
Confidence 689999 5 99999999 5 64 244 22 56789999999999999999999999754
No 76
>1qwo_A Phytase; alpha barrel, beta sandwich, orthogonal bundle, glycoprotein phosphohistidine, hydrolase; HET: NEP NAG; 1.50A {Aspergillus fumigatus} SCOP: c.60.1.2 PDB: 1skb_A* 1sk8_A* 1ska_A* 1sk9_A*
Probab=95.32 E-value=0.015 Score=62.59 Aligned_cols=62 Identities=18% Similarity=0.193 Sum_probs=47.7
Q ss_pred Cccccch------HHHHHHHhccchhhhhhcCCCCCCcchhhhcccccccceEeecCchhHHHHHHHHHHhhhcccC---
Q 005046 477 SGQFIDF------LIEQFYQDNGVNEIAYWWGSHSEGTGLLRLHSTYRHDLKIYSSDEGRVQMSAAAFAKGLLDLEG--- 547 (716)
Q Consensus 477 GGelT~~------~lG~~fR~~~~~~~~~~~~Yp~~~~gLlrlhst~rhdlkIysSdEgRVq~tAaafakg~L~leg--- 547 (716)
.|+||.. +||+.||+ - || .|| .. +.+.|.||+-.||.+||++|+.||....+
T Consensus 101 ~G~LT~~G~~q~~~lG~~lr~-r---------Y~----~ll--~~---~~v~vrST~~~Rti~Sa~~fl~Gl~p~~~~~~ 161 (442)
T 1qwo_A 101 ADDLTPFGEQQLVNSGIKFYQ-R---------YK----ALA--RS---VVPFIRASGSDRVIASGEKFIEGFQQAKLADP 161 (442)
T ss_dssp SSSBCHHHHHHHHHHHHHHHH-H---------TH----HHH--TT---CCCEEEEESCHHHHHHHHHHHHHHHHHHHTCT
T ss_pred cccchHHHHHHHHHHHHHHHH-H---------HH----HHh--cc---CceEEEeCCccHHHHHHHHHHHHhcCCccccc
Confidence 5799987 99999999 5 64 344 22 46889999999999999999999997542
Q ss_pred ----CCCcceeeeE
Q 005046 548 ----QLTPILVSLV 557 (716)
Q Consensus 548 ----eLtPilv~~V 557 (716)
.+.|+.+..+
T Consensus 162 ~~~~~~~p~~~~~i 175 (442)
T 1qwo_A 162 GATNRAAPAISVII 175 (442)
T ss_dssp TCCCCCCCCEEEEE
T ss_pred ccccccCccceEEe
Confidence 2557664344
No 77
>2io8_A Bifunctional glutathionylspermidine synthetase/amidase; ligase, hydrolase; HET: ADP; 2.10A {Escherichia coli} SCOP: c.30.1.7 d.3.1.15 d.142.1.8 PDB: 2io7_A* 2io9_A* 2ioa_A* 2iob_A 3o98_A*
Probab=95.08 E-value=0.12 Score=59.15 Aligned_cols=114 Identities=16% Similarity=0.181 Sum_probs=71.5
Q ss_pred HHHHhcCCcccCCchhhhHhhhHHHHHHHHHhCCCC-CC---cEEEEecCCCccccccccCccceeeecCeeecCcEEEe
Q 005046 75 SYATLRKPFLVNELEPQHLLHDRRKVYEQLEKYGIP-VP---RYALVNREVPYQELDYFIEEEDFVEVHGNRFWKPFVEK 150 (716)
Q Consensus 75 ~y~~lr~p~~iNdl~~q~~l~DR~~~lqiL~~~gIP-~P---~t~~~~r~~~~~~~~~~~e~~d~I~v~G~~~~kPfVeK 150 (716)
++++..+...+|.+.++- +.+|...--+.+.. | +| .|.+- +..+ +. ...+|.|
T Consensus 477 ~~l~~~~v~iieP~~~~l-lsNKailalLw~l~--p~hp~LLpT~f~-------------~~~~-l~------~~~yV~K 533 (619)
T 2io8_A 477 DVLLRPEVLVFEPLWTVI-PGNKAILPILWSLF--PHHRYLLDTDFT-------------VNDE-LV------KTGYAVK 533 (619)
T ss_dssp HHHTCTTCEEESCGGGGT-TTSTTHHHHHHHHS--TTCTTCCCEESS-------------CCHH-HH------HHCEEEE
T ss_pred HHHHhCCCEEECHHHHHH-hhhHHHHHHHHHhC--CCCCCCCCeeec-------------CCcc-cc------cCCEEEc
Confidence 334466788999998865 77775433333322 3 34 44321 1111 11 1349999
Q ss_pred eccc-cCcceeEEeccCCCChHHHHHhhhCCCcccccccccccccCcceEEeeccCCCCce-----eEEEEECCceeEEE
Q 005046 151 PVHG-DDHSIMIYYPSSAGGGMKELFRKVGNRSSEFHPDVRRVRREGSYIYEEFMPTGGTD-----VKVYTVGPEYAHAE 224 (716)
Q Consensus 151 pv~G-edHni~IYyp~~~GgG~~rLfrkign~sS~~~p~~~~~r~~gsyIyQEFi~~~G~D-----IKvytVG~~~vhAe 224 (716)
|+-| +-.||.|+-+ +|. . +.+..-.| .+..||||||++-...| |-+|+||++++.+.
T Consensus 534 Pi~gReG~nV~i~~~--~~~--~-----~~~~~~~y--------~~~~~IyQe~~~lp~~d~~~~~iG~f~vgg~~aG~~ 596 (619)
T 2io8_A 534 PIAGRCGSNIDLVSH--HEE--V-----LDKTSGKF--------AEQKNIYQQLWCLPKVDGKYIQVCTFTVGGNYGGTC 596 (619)
T ss_dssp ETTCCTTTTCEEECT--TSC--E-----EEECCCTT--------TTSCEEEEECCCCCEETTEEEEEEEEEETTEEEEEE
T ss_pred cCCCCCCCCEEEEeC--CCh--h-----Hhhccccc--------cCCCeEEEEecCCCCcCCcceEEEEEEECCEEEEEE
Confidence 9999 6666666643 111 0 00001111 35679999999987788 99999999999999
Q ss_pred eecC
Q 005046 225 ARKS 228 (716)
Q Consensus 225 ~RKS 228 (716)
.|.+
T Consensus 597 ~R~~ 600 (619)
T 2io8_A 597 LRGD 600 (619)
T ss_dssp EEEE
T ss_pred EecC
Confidence 9997
No 78
>3k4q_A 3-phytase A; PHYA, 3-phosphotase, MYO-inositol hexakis phosphate phosphohydrolase, 37288-11-2, MYO-inositol hexakis sulfate, 62-1; HET: IHS NAG; 2.20A {Aspergillus niger} SCOP: c.60.1.2 PDB: 3k4p_A* 1ihp_A
Probab=94.67 E-value=0.032 Score=60.98 Aligned_cols=52 Identities=21% Similarity=0.140 Sum_probs=41.4
Q ss_pred Cccccch------HHHHHHHhccchhhhhhcCCCCCCcchhhhcccccccceEeecCchhHHHHHHHHHHhhhcccC
Q 005046 477 SGQFIDF------LIEQFYQDNGVNEIAYWWGSHSEGTGLLRLHSTYRHDLKIYSSDEGRVQMSAAAFAKGLLDLEG 547 (716)
Q Consensus 477 GGelT~~------~lG~~fR~~~~~~~~~~~~Yp~~~~gLlrlhst~rhdlkIysSdEgRVq~tAaafakg~L~leg 547 (716)
.|+||.. ++|+.||. - ||. |+ .. ..+.++||+..||.+||++|+.||+..++
T Consensus 102 ~g~LT~~G~~~~~~lG~~~r~-r---------Y~~----l~--~~---~~~~~rst~~~Rt~~Sa~~f~~Gl~~~~~ 159 (444)
T 3k4q_A 102 ADDLTPFGEQELVNSGIKFYQ-R---------YES----LT--RN---IVPFIRSSGSSRVIASGKKFIEGFQSTKL 159 (444)
T ss_dssp CSSBCHHHHHHHHHHHHHHHH-H---------THH----HH--TT---CCCEEEEEESHHHHHHHHHHHHHHHHHHH
T ss_pred cccchHHHHHHHHHHHHHHHH-H---------hHH----hc--cC---CceEEEeCCccHHHHHHHHHHHhcCCCcc
Confidence 3688886 99999999 4 652 33 21 35789999999999999999999998653
No 79
>3ntl_A Acid glucose-1-phosphate phosphatase; histidine acid phosphatase, phytate binding site, hydrolase; HET: IHP; 1.88A {Enterobacter cloacae} PDB: 1nt4_A*
Probab=94.47 E-value=0.019 Score=62.06 Aligned_cols=57 Identities=14% Similarity=0.214 Sum_probs=44.6
Q ss_pred Cccccch------HHHHHHHhccchhhhhhcCCCCCCcchhhhccc--c-cccceEeecCchhHHHHHHHHHHhhhcccC
Q 005046 477 SGQFIDF------LIEQFYQDNGVNEIAYWWGSHSEGTGLLRLHST--Y-RHDLKIYSSDEGRVQMSAAAFAKGLLDLEG 547 (716)
Q Consensus 477 GGelT~~------~lG~~fR~~~~~~~~~~~~Yp~~~~gLlrlhst--~-rhdlkIysSdEgRVq~tAaafakg~L~leg 547 (716)
.|+||.. +||+.||+ . |- ..||| ... | ..++.|+||+--|+++||++|+.||.--.|
T Consensus 44 ~g~LT~~G~~q~~~lG~~lr~-r---------Y~--~~~ll--~~~~~~~~~~v~vrst~~~Rt~~SA~~fl~Gl~P~~~ 109 (398)
T 3ntl_A 44 GGQLTTKGGVLEVYMGHYMRE-W---------LA--QQGMV--KTGECPAADSVYAYANSLQRTVATAQFFITGAFPGCD 109 (398)
T ss_dssp TTSBCHHHHHHHHHHHHHHHH-H---------HH--HTTSS--CTTSCCCTTSEEEEECSSHHHHHHHHHHHHHHSTTSC
T ss_pred ccccchHHHHHHHHHHHHHHH-H---------Hh--hcCCC--ccccCCCcCeEEEEECCchHHHHHHHHHHHHhCCCCC
Confidence 3899986 99999999 4 51 12454 232 3 379999999999999999999999987654
No 80
>2nu8_B SCS-beta, succinyl-COA synthetase beta chain; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.23.4.1 d.142.1.4 PDB: 1scu_B* 2nu6_B* 1jkj_B* 2nu7_B* 2nu9_B* 2nua_B* 2scu_B* 1jll_B* 1cqj_B* 1cqi_B*
Probab=92.06 E-value=0.2 Score=54.07 Aligned_cols=45 Identities=16% Similarity=0.208 Sum_probs=32.1
Q ss_pred HHHHHHHHHhCCCCCCcEEEEecCCCccccccccCccceeeecCeeecCc-EEEeeccc
Q 005046 97 RRKVYEQLEKYGIPVPRYALVNREVPYQELDYFIEEEDFVEVHGNRFWKP-FVEKPVHG 154 (716)
Q Consensus 97 R~~~lqiL~~~gIP~P~t~~~~r~~~~~~~~~~~e~~d~I~v~G~~~~kP-fVeKpv~G 154 (716)
...+-++|+++|||+|+..++... ++.... -..++.| +|+||..+
T Consensus 5 E~~aK~lL~~~GIpvp~~~~~~s~------------eea~~a-a~~lG~P~vVvK~~~~ 50 (388)
T 2nu8_B 5 EYQAKQLFARYGLPAPVGYACTTP------------REAEEA-ASKIGAGPWVVKCQVH 50 (388)
T ss_dssp HHHHHHHHHHTTCCCCCEEEESSH------------HHHHHH-HHHHCSSCEEEEECCS
T ss_pred HHHHHHHHHHCCcCCCCeeEECCH------------HHHHHH-HHHhCCCeEEEEEecC
Confidence 456789999999999999988733 222221 1235589 99999874
No 81
>3it3_A Acid phosphatase; HAP, hydrolase; HET: 3AM; 1.50A {Francisella tularensis subsp} PDB: 4e3w_A 2glc_A 2glb_A 2gla_A 3it0_A* 3it1_A* 3it2_A 2p36_A*
Probab=90.46 E-value=0.12 Score=54.40 Aligned_cols=55 Identities=24% Similarity=0.211 Sum_probs=34.0
Q ss_pred CcceeEEEEEEEcCCCCcccceeEEechHHHHHHHHhhcCCCCCcceeecchhcHHHHHHHHhhhc
Q 005046 353 SEELRCVIAVMRHGDRTPKQKVKLKVTEEKLLNLMLKYNGGRPRAETKLKSAVQLQDLLDATRILV 418 (716)
Q Consensus 353 ~~eLr~vv~ViRHgDRTPKqK~K~~~~~~~f~~l~~~~~~~~~~~e~klk~~~~l~~~l~~~~~~~ 418 (716)
+.+|+-|+.+.|||||||..-.. ..+ .. +..+ .+++.-+...|+..+-...|.-.
T Consensus 5 ~~~L~~v~v~~RHG~R~p~~~~p----~~~----~~-w~~~--~g~LT~~G~~q~~~lG~~lr~~Y 59 (342)
T 3it3_A 5 SSKLIFVSMITRHGDRAPFANIE----NAN----YS-WGTE--LSELTPIGMNQEYNLGLQLRKRY 59 (342)
T ss_dssp -CEEEEEEEEEECCCBCCSSCCT----TCC----CC-CSSC--TTCBCHHHHHHHHHHHHHHHHHH
T ss_pred ccEeeEEEEEEeCCCCCCcccCC----CCc----cc-CCCC--hHhhhHHHHHHHHHHHHHHHHHH
Confidence 46999999999999999985321 110 00 2122 35666666677766666655443
No 82
>3ufx_B Succinyl-COA synthetase beta subunit; ATP-grAsp fold, ligase; HET: GDP; 2.35A {Thermus aquaticus}
Probab=90.46 E-value=0.038 Score=59.82 Aligned_cols=44 Identities=27% Similarity=0.372 Sum_probs=31.7
Q ss_pred HHHHHHHHhCCCCCCcEEEEecCCCccccccccCccceeeecCeeecCcEEEeeccc
Q 005046 98 RKVYEQLEKYGIPVPRYALVNREVPYQELDYFIEEEDFVEVHGNRFWKPFVEKPVHG 154 (716)
Q Consensus 98 ~~~lqiL~~~gIP~P~t~~~~r~~~~~~~~~~~e~~d~I~v~G~~~~kPfVeKpv~G 154 (716)
..+.++|+++|||+|++.++... ++.... -..++.|+|+||.+.
T Consensus 6 ~~aK~lL~~~GIpvp~~~~~~s~------------eea~~a-a~~lG~PvVvKa~~~ 49 (397)
T 3ufx_B 6 YQAKEILARYGVPVPPGKVAYTP------------EEAKRI-AEEFGKRVVIKAQVH 49 (397)
T ss_dssp HHHHHHHHHTTCCCCCEEEESSH------------HHHHHH-HHHHTSCEEEEECCS
T ss_pred HHHHHHHHHCCCCCCCeEEECCH------------HHHHHH-HHHcCCCEEEEEccc
Confidence 46788999999999999998733 222221 123459999999883
No 83
>2fp4_B Succinyl-COA ligase [GDP-forming] beta-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.23.4.1 d.142.1.4 PDB: 2fpg_B* 2fpi_B* 2fpp_B* 1euc_B* 1eud_B*
Probab=87.06 E-value=0.12 Score=55.87 Aligned_cols=42 Identities=17% Similarity=0.287 Sum_probs=29.3
Q ss_pred HHHHHHHHhCCCCCCcEEEEecCCCccccccccCccceeeecCeeecC-cEEEeec
Q 005046 98 RKVYEQLEKYGIPVPRYALVNREVPYQELDYFIEEEDFVEVHGNRFWK-PFVEKPV 152 (716)
Q Consensus 98 ~~~lqiL~~~gIP~P~t~~~~r~~~~~~~~~~~e~~d~I~v~G~~~~k-PfVeKpv 152 (716)
..+-++|+++|||+|+..++... ++.... -..++. |+|+||.
T Consensus 6 ~~aK~lL~~~GIpvp~~~~~~s~------------~ea~~~-a~~lg~~PvVvK~~ 48 (395)
T 2fp4_B 6 YQSKKLMSDNGVKVQRFFVADTA------------NEALEA-AKRLNAKEIVLKAQ 48 (395)
T ss_dssp HHHHHHHHHTTCCCCCEEEESSH------------HHHHHH-HHHHTCSSEEEEEC
T ss_pred HHHHHHHHHCCcCCCCeEEECCH------------HHHHHH-HHHcCCCcEEEEEe
Confidence 46778999999999999988633 222221 112446 9999995
No 84
>3tig_A TTL protein; ATP-grAsp, ligase, tubulin; 2.50A {Silurana} PDB: 3tii_A* 3tin_A*
Probab=84.35 E-value=0.2 Score=54.28 Aligned_cols=56 Identities=11% Similarity=0.256 Sum_probs=35.1
Q ss_pred cCcEEEeeccccCcceeEEeccCCCChHHHHHhhhCCCcccccccccccccCcceEEeeccCC------CC--ceeEEEE
Q 005046 144 WKPFVEKPVHGDDHSIMIYYPSSAGGGMKELFRKVGNRSSEFHPDVRRVRREGSYIYEEFMPT------GG--TDVKVYT 215 (716)
Q Consensus 144 ~kPfVeKpv~GedHni~IYyp~~~GgG~~rLfrkign~sS~~~p~~~~~r~~gsyIyQEFi~~------~G--~DIKvyt 215 (716)
+.++|+||..|. +|-|.. |++....-...++ .....||+|+||.. +| -|||+||
T Consensus 147 ~~~wI~KP~~~s-----------rG~GI~-l~~~~~~i~~~~~------~~~~~~VvQkYI~~PlLi~~~grKFDlR~Yv 208 (380)
T 3tig_A 147 GNVWIAKSSSGA-----------KGEGIL-ISSDATELLDFID------NQGQVHVIQKYLESPLLLEPGHRKFDIRSWV 208 (380)
T ss_dssp CCCEEEEESCC---------------CCB-CCSCSHHHHHHHH------HHTSCEEEEECCSSBCCBTTTTBCEEEEEEE
T ss_pred CCeEEEeCCccC-----------CCCCEE-EeCCHHHHHHHHh------ccCCcEEEEecccCceeecCCCceeEEEEEE
Confidence 488999999998 888875 6664421100011 13568999999975 44 5999998
Q ss_pred EC
Q 005046 216 VG 217 (716)
Q Consensus 216 VG 217 (716)
+-
T Consensus 209 lv 210 (380)
T 3tig_A 209 LV 210 (380)
T ss_dssp EE
T ss_pred EE
Confidence 83
No 85
>3ntl_A Acid glucose-1-phosphate phosphatase; histidine acid phosphatase, phytate binding site, hydrolase; HET: IHP; 1.88A {Enterobacter cloacae} PDB: 1nt4_A*
Probab=83.23 E-value=0.49 Score=51.14 Aligned_cols=19 Identities=26% Similarity=0.319 Sum_probs=17.3
Q ss_pred CcceeEEEEEEEcCCCCcc
Q 005046 353 SEELRCVIAVMRHGDRTPK 371 (716)
Q Consensus 353 ~~eLr~vv~ViRHgDRTPK 371 (716)
..+|+-|+.|.|||||||-
T Consensus 4 ~~~L~~V~vl~RHG~R~P~ 22 (398)
T 3ntl_A 4 GYQLEQVLIMSRANLRAPL 22 (398)
T ss_dssp TEEEEEEEEEEECCSBCCC
T ss_pred CCEEEEEEEEecCCCCCCC
Confidence 4699999999999999993
No 86
>3n6x_A Putative glutathionylspermidine synthase; domain of unknown function (DUF404), structural genomics; 2.35A {Methylobacillus flagellatus}
Probab=78.08 E-value=0.68 Score=51.56 Aligned_cols=51 Identities=14% Similarity=0.226 Sum_probs=34.8
Q ss_pred cCcceEEeeccCC-------CC------ceeEEEEECCc----eeEEEeecCCCCCCceeecCCCCce
Q 005046 194 REGSYIYEEFMPT-------GG------TDVKVYTVGPE----YAHAEARKSPVVDGVVMRNPDGKEV 244 (716)
Q Consensus 194 ~~gsyIyQEFi~~-------~G------~DIKvytVG~~----~vhAe~RKSPv~DG~vrrN~~gke~ 244 (716)
....||+||+++- +| .|+|+|++.++ +..+-+|-|+..+..+-.+..||+.
T Consensus 399 ~p~~yIaQe~v~ls~~P~~~~~~~~~r~~dlR~F~~~g~~~~v~pGgltRva~~~~~~vvn~s~Gggs 466 (474)
T 3n6x_A 399 NPANYIAQPTLALSTCPTLVETGIAPRHVDLRPFVLSGKTVSLVPGALCRVALREGSLVVNSSQGGGT 466 (474)
T ss_dssp SGGGEEEEECCCCCEEEEEETTEEEEEEEEEECEEEESSSEEECSCCEEEEECSTTCCCCSTTSSEEE
T ss_pred CCCCEEEeeccCCcccceeeCCceeeeeEEEEEEEEcCCceEEecceEEEEecCCCCceEECCCCCcc
Confidence 4567999999972 23 59999999555 6778899997333334444445553
No 87
>2vob_A Trypanothione synthetase; ligase; 2.3A {Leishmania major} PDB: 2vps_A 2vpm_A
Probab=67.18 E-value=6 Score=45.67 Aligned_cols=67 Identities=13% Similarity=0.369 Sum_probs=33.5
Q ss_pred CcEEEeeccc-cCcceeEEeccCCCChHHHHHhhhCCCcccccccccccccCcceEEeeccCCC---C--ceeEEEEECC
Q 005046 145 KPFVEKPVHG-DDHSIMIYYPSSAGGGMKELFRKVGNRSSEFHPDVRRVRREGSYIYEEFMPTG---G--TDVKVYTVGP 218 (716)
Q Consensus 145 kPfVeKpv~G-edHni~IYyp~~~GgG~~rLfrkign~sS~~~p~~~~~r~~gsyIyQEFi~~~---G--~DIKvytVG~ 218 (716)
..+|.||+.| +..||.|+-+ ++ . ..+ ...-.| .++.||||||++-. | .=|=+|+||+
T Consensus 543 ~~yV~KPi~gReG~nV~I~~~----~~-~-~~~---~~~g~y--------~~~~~IyQe~~~lp~f~~~~~~iG~~lvg~ 605 (652)
T 2vob_A 543 HGYAKKPIVGRVGSNVIITSG----DG-V-VHA---ESGGKY--------GKRNMIYQQLFELKKQDDYYAIIGGWMIGD 605 (652)
T ss_dssp HCEEEEECC--------------------------------------------CEEEEECCC--CBTTBCCEEEEEEETT
T ss_pred CCeEeccCCCCCCCCEEEEcC----Cc-h-hhh---hccccc--------CCCCeEEEecccCCccCCcceEEEEEEECC
Confidence 3499999999 6666666521 11 1 111 000112 36779999999752 2 5577899999
Q ss_pred ceeEEEeecC
Q 005046 219 EYAHAEARKS 228 (716)
Q Consensus 219 ~~vhAe~RKS 228 (716)
+++..-.|.+
T Consensus 606 ~~aGi~iR~~ 615 (652)
T 2vob_A 606 AFSGTGIRED 615 (652)
T ss_dssp EEEEEEEEC-
T ss_pred EEEEEEEecC
Confidence 9999999986
No 88
>2gfi_A Phytase; hydrolase; HET: NAG; 2.29A {Debaryomyces castellii}
Probab=65.62 E-value=2.6 Score=45.78 Aligned_cols=22 Identities=32% Similarity=0.431 Sum_probs=18.8
Q ss_pred CCcceeEEEEEEEcCCCCcccc
Q 005046 352 QSEELRCVIAVMRHGDRTPKQK 373 (716)
Q Consensus 352 ~~~eLr~vv~ViRHgDRTPKqK 373 (716)
...+|.-|..|.|||+|||-..
T Consensus 57 ~~~~l~~V~~l~RHG~R~P~~~ 78 (458)
T 2gfi_A 57 DQCTLEQVQLFSRHGERYPSTG 78 (458)
T ss_dssp TTEEEEEEEEEEECCSBCCCHH
T ss_pred CCceEEEEeeeeccccCCCCch
Confidence 3469999999999999999653
No 89
>1qwo_A Phytase; alpha barrel, beta sandwich, orthogonal bundle, glycoprotein phosphohistidine, hydrolase; HET: NEP NAG; 1.50A {Aspergillus fumigatus} SCOP: c.60.1.2 PDB: 1skb_A* 1sk8_A* 1ska_A* 1sk9_A*
Probab=65.06 E-value=2.7 Score=45.09 Aligned_cols=21 Identities=29% Similarity=0.480 Sum_probs=18.2
Q ss_pred CCcceeEEEEEEEcCCCCccc
Q 005046 352 QSEELRCVIAVMRHGDRTPKQ 372 (716)
Q Consensus 352 ~~~eLr~vv~ViRHgDRTPKq 372 (716)
...+|+=|..|.|||+|||--
T Consensus 45 ~g~~l~~V~vl~RHG~R~P~~ 65 (442)
T 1qwo_A 45 KDCRITLVQVLSRHGARYPTS 65 (442)
T ss_dssp TTEEEEEEEEEEECCCBCCCH
T ss_pred CCCeeEEEEEEecCcCcCCCc
Confidence 346999999999999999954
No 90
>1qfx_A Protein (PH 2.5 acid phosphatase); phosphomonoesterase, hydrolase; HET: NAG BMA MAN; 2.40A {Aspergillus niger} SCOP: c.60.1.2
Probab=60.34 E-value=3.7 Score=44.73 Aligned_cols=21 Identities=48% Similarity=0.650 Sum_probs=18.4
Q ss_pred CCcceeEEEEEEEcCCCCccc
Q 005046 352 QSEELRCVIAVMRHGDRTPKQ 372 (716)
Q Consensus 352 ~~~eLr~vv~ViRHgDRTPKq 372 (716)
...+|+-|..|.|||+|+|-.
T Consensus 50 ~g~~l~~V~vl~RHG~R~P~~ 70 (460)
T 1qfx_A 50 TSCEVDQVIMVKRHGERYPSP 70 (460)
T ss_dssp TTEEEEEEEEEEECCSBCCCH
T ss_pred CCCeEEEEEEEeccCcCCCCc
Confidence 356999999999999999964
No 91
>1ujc_A Phosphohistidine phosphatase SIXA; alpha-beta fold, hydrolase; 1.90A {Escherichia coli} PDB: 1ujb_A
Probab=56.01 E-value=6.2 Score=36.41 Aligned_cols=21 Identities=14% Similarity=0.112 Sum_probs=19.3
Q ss_pred eEeecCchhHHHHHHHHHHhh
Q 005046 522 KIYSSDEGRVQMSAAAFAKGL 542 (716)
Q Consensus 522 kIysSdEgRVq~tAaafakg~ 542 (716)
.||||+-.|++.||++++.++
T Consensus 47 ~i~sSpl~Ra~qTA~~i~~~~ 67 (161)
T 1ujc_A 47 RVLVSPFLRAEQTLEEVGDCL 67 (161)
T ss_dssp EEEECSSHHHHHHHHHHHHHS
T ss_pred EEEeCchHHHHHHHHHHHHhc
Confidence 599999999999999999864
No 92
>2rfl_A Putative phosphohistidine phosphatase SIXA; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 2.35A {Agrobacterium tumefaciens str}
Probab=55.45 E-value=6.8 Score=36.55 Aligned_cols=21 Identities=24% Similarity=0.396 Sum_probs=19.5
Q ss_pred eEeecCchhHHHHHHHHHHhh
Q 005046 522 KIYSSDEGRVQMSAAAFAKGL 542 (716)
Q Consensus 522 kIysSdEgRVq~tAaafakg~ 542 (716)
.||||+-.|++.||++++..+
T Consensus 57 ~i~sSpl~Ra~qTA~~i~~~~ 77 (173)
T 2rfl_A 57 LILSSTAARCRQTTQAWQRAF 77 (173)
T ss_dssp EEEECSSHHHHHHHHHHHHHH
T ss_pred EEEECCHHHHHHHHHHHHHhc
Confidence 599999999999999999875
No 93
>3mxo_A Serine/threonine-protein phosphatase PGAM5, mitoc; phosphoglycerate mutase family member 5, BXLBV68, MGC protein, structural genomics consortium; HET: PG4 PGE PEG; 1.70A {Homo sapiens} PDB: 3o0t_A
Probab=48.33 E-value=8.3 Score=36.56 Aligned_cols=21 Identities=24% Similarity=0.237 Sum_probs=19.5
Q ss_pred eEeecCchhHHHHHHHHHHhh
Q 005046 522 KIYSSDEGRVQMSAAAFAKGL 542 (716)
Q Consensus 522 kIysSdEgRVq~tAaafakg~ 542 (716)
.||||+-.|++.||++++.++
T Consensus 57 ~i~sSpl~Ra~qTA~~i~~~~ 77 (202)
T 3mxo_A 57 KIVHSSMTRAIETTDIISRHL 77 (202)
T ss_dssp EEEEESSHHHHHHHHHHHHTS
T ss_pred EEEECChHHHHHHHHHHHHhC
Confidence 599999999999999999876
No 94
>3hjg_A Putative alpha-ribazole-5'-phosphate phosphatase COBC; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 2.80A {Vibrio parahaemolyticus}
Probab=46.78 E-value=10 Score=36.48 Aligned_cols=21 Identities=29% Similarity=0.140 Sum_probs=19.1
Q ss_pred eEeecCchhHHHHHHHHHHhh
Q 005046 522 KIYSSDEGRVQMSAAAFAKGL 542 (716)
Q Consensus 522 kIysSdEgRVq~tAaafakg~ 542 (716)
.||||+-.|++.||++++.++
T Consensus 51 ~i~sSpl~Ra~qTA~~i~~~~ 71 (213)
T 3hjg_A 51 GIISSPLSRCHDLAQILAEQQ 71 (213)
T ss_dssp CEEECSSHHHHHHHHHHHHHH
T ss_pred EEEECChHHHHHHHHHHHhcc
Confidence 499999999999999999764
No 95
>1qhf_A Protein (phosphoglycerate mutase); transferase (phosphoryl); HET: 3PG; 1.70A {Saccharomyces cerevisiae} SCOP: c.60.1.1 PDB: 5pgm_D 1bq3_D* 1bq4_D 4pgm_A 3pgm_A*
Probab=46.51 E-value=11 Score=36.71 Aligned_cols=21 Identities=19% Similarity=0.173 Sum_probs=19.5
Q ss_pred eEeecCchhHHHHHHHHHHhh
Q 005046 522 KIYSSDEGRVQMSAAAFAKGL 542 (716)
Q Consensus 522 kIysSdEgRVq~tAaafakg~ 542 (716)
.||||+-.|++.||+++++++
T Consensus 51 ~i~sSpl~Ra~qTA~~i~~~~ 71 (240)
T 1qhf_A 51 VLYTSKLSRAIQTANIALEKA 71 (240)
T ss_dssp EEEECSSHHHHHHHHHHHHHT
T ss_pred EEEECCcHHHHHHHHHHHHhc
Confidence 499999999999999999875
No 96
>1fzt_A Phosphoglycerate mutase; open B-sheet-helices, isomerase; NMR {Schizosaccharomyces pombe} SCOP: c.60.1.1
Probab=46.49 E-value=10 Score=36.11 Aligned_cols=21 Identities=14% Similarity=0.175 Sum_probs=19.7
Q ss_pred eEeecCchhHHHHHHHHHHhh
Q 005046 522 KIYSSDEGRVQMSAAAFAKGL 542 (716)
Q Consensus 522 kIysSdEgRVq~tAaafakg~ 542 (716)
.||||+-.|++.||+++++++
T Consensus 58 ~i~sSpl~Ra~qTA~~i~~~~ 78 (211)
T 1fzt_A 58 IAFTSALQRAQKTCQIILEEV 78 (211)
T ss_dssp EEEEESSHHHHHHHHHHHHHH
T ss_pred EEEECCcHHHHHHHHHHHHhc
Confidence 599999999999999999886
No 97
>3kkk_A Phosphoglycerate mutase; PGAM, glycolysis, malaria, structural genomics, medical STRU genomics of pathogenic protozoa, MSGPP; 2.08A {Plasmodium falciparum 3D7} PDB: 1xq9_A
Probab=46.32 E-value=11 Score=36.92 Aligned_cols=21 Identities=24% Similarity=0.127 Sum_probs=19.9
Q ss_pred eEeecCchhHHHHHHHHHHhh
Q 005046 522 KIYSSDEGRVQMSAAAFAKGL 542 (716)
Q Consensus 522 kIysSdEgRVq~tAaafakg~ 542 (716)
.||||+-.|++.||+++++++
T Consensus 62 ~i~sSpl~Ra~qTA~~i~~~~ 82 (258)
T 3kkk_A 62 VVYTSVLKRAICTAWNVLKTA 82 (258)
T ss_dssp EEEECSSHHHHHHHHHHHHHH
T ss_pred EEEECchHHHHHHHHHHHHhc
Confidence 599999999999999999987
No 98
>3gp3_A 2,3-bisphosphoglycerate-dependent phosphoglycerat; phosphoglyceromutase, decode, SBRI, niaid, UWPPG, glycolysis isomerase; HET: PG4 SEP; 1.50A {Burkholderia pseudomallei} SCOP: c.60.1.1 PDB: 3fdz_A* 3ezn_A* 3gp5_A* 3gw8_A* 3lnt_A
Probab=46.03 E-value=11 Score=36.93 Aligned_cols=21 Identities=14% Similarity=0.020 Sum_probs=19.8
Q ss_pred eEeecCchhHHHHHHHHHHhh
Q 005046 522 KIYSSDEGRVQMSAAAFAKGL 542 (716)
Q Consensus 522 kIysSdEgRVq~tAaafakg~ 542 (716)
.||||+-.|++.||+++++++
T Consensus 60 ~i~sSpl~Ra~qTA~~i~~~~ 80 (257)
T 3gp3_A 60 IAYTSVLKRAIRTLWHVQDQM 80 (257)
T ss_dssp EEEECSSHHHHHHHHHHHHHH
T ss_pred EEEeCChHHHHHHHHHHHHhc
Confidence 599999999999999999887
No 99
>3eoz_A Putative phosphoglycerate mutase; PGAM, malaria, structural genomics, isomerase, structural GE consortium, SGC; 2.40A {Plasmodium falciparum}
Probab=45.08 E-value=9.8 Score=36.70 Aligned_cols=21 Identities=33% Similarity=0.330 Sum_probs=19.3
Q ss_pred eEeecCchhHHHHHHHHHHhh
Q 005046 522 KIYSSDEGRVQMSAAAFAKGL 542 (716)
Q Consensus 522 kIysSdEgRVq~tAaafakg~ 542 (716)
.||||+-.|++.||+++++.+
T Consensus 71 ~i~sSpl~Ra~qTA~~i~~~~ 91 (214)
T 3eoz_A 71 VIYHSDMIRAKETANIISKYF 91 (214)
T ss_dssp EEEECSSHHHHHHHHHHHTTC
T ss_pred EEEECCcHHHHHHHHHHHHHC
Confidence 499999999999999998875
No 100
>3c7t_A Ecdysteroid-phosphate phosphatase; ecdysone, 2H-phosphatase, PGM, hydrolase; 1.76A {Bombyx mori}
Probab=42.37 E-value=14 Score=36.50 Aligned_cols=21 Identities=33% Similarity=0.509 Sum_probs=19.5
Q ss_pred eEeecCchhHHHHHHHHHHhh
Q 005046 522 KIYSSDEGRVQMSAAAFAKGL 542 (716)
Q Consensus 522 kIysSdEgRVq~tAaafakg~ 542 (716)
.||||+-.|++.||++++.++
T Consensus 84 ~i~sSpl~Ra~qTA~~i~~~~ 104 (263)
T 3c7t_A 84 HVYASPALRCVETAQGFLDGL 104 (263)
T ss_dssp EEEECSSHHHHHHHHHHHHHH
T ss_pred EEEECCcHHHHHHHHHHHHHc
Confidence 499999999999999999876
No 101
>1e58_A Phosphoglycerate mutase; phosphohistidine, glycolysis and gluconeogenesis, isomerase; HET: NEP; 1.25A {Escherichia coli} SCOP: c.60.1.1 PDB: 1e59_A*
Probab=42.26 E-value=14 Score=36.07 Aligned_cols=21 Identities=19% Similarity=0.021 Sum_probs=19.6
Q ss_pred eEeecCchhHHHHHHHHHHhh
Q 005046 522 KIYSSDEGRVQMSAAAFAKGL 542 (716)
Q Consensus 522 kIysSdEgRVq~tAaafakg~ 542 (716)
.||||+-.|++.||++++.++
T Consensus 53 ~i~sSpl~Ra~qTA~~i~~~~ 73 (249)
T 1e58_A 53 FAYTSVLKRAIHTLWNVLDEL 73 (249)
T ss_dssp EEEECSSHHHHHHHHHHHHHH
T ss_pred EEEECCcHHHHHHHHHHHHhc
Confidence 599999999999999999876
No 102
>3mbk_A Ubiquitin-associated and SH3 domain-containing PR; PGM, STS-1, signaling protein, low PH, alternative splicing, cytoplasm, nucleus, phosphoprotein; 1.35A {Mus musculus} PDB: 2ikq_A 2h0q_A
Probab=42.06 E-value=14 Score=36.46 Aligned_cols=21 Identities=33% Similarity=0.438 Sum_probs=19.8
Q ss_pred eEeecCchhHHHHHHHHHHhh
Q 005046 522 KIYSSDEGRVQMSAAAFAKGL 542 (716)
Q Consensus 522 kIysSdEgRVq~tAaafakg~ 542 (716)
.||||+-.|++.||++++.++
T Consensus 82 ~v~sSpl~Ra~qTA~~i~~~~ 102 (264)
T 3mbk_A 82 HVYCSPSLRCVQTAHNILKGL 102 (264)
T ss_dssp EEEECSSHHHHHHHHHHHHHH
T ss_pred EEEECcHHHHHHHHHHHHHHh
Confidence 499999999999999999987
No 103
>3r7a_A Phosphoglycerate mutase, putative; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE EPE; 1.84A {Bacillus anthracis}
Probab=41.81 E-value=14 Score=35.72 Aligned_cols=21 Identities=38% Similarity=0.366 Sum_probs=19.7
Q ss_pred eEeecCchhHHHHHHHHHHhh
Q 005046 522 KIYSSDEGRVQMSAAAFAKGL 542 (716)
Q Consensus 522 kIysSdEgRVq~tAaafakg~ 542 (716)
.||||+-.|++.||++++.++
T Consensus 62 ~i~sSpl~Ra~qTA~~i~~~~ 82 (237)
T 3r7a_A 62 NAYSSDSGRAIETANLVLKYS 82 (237)
T ss_dssp EEEECSCHHHHHHHHHHHHHT
T ss_pred EEEECCcHHHHHHHHHHHHhc
Confidence 499999999999999999886
No 104
>3e9c_A ZGC:56074; histidine phosphatase, hydrolase; 2.00A {Danio rerio} PDB: 3e9d_A 3e9e_A
Probab=41.30 E-value=13 Score=37.02 Aligned_cols=21 Identities=14% Similarity=0.156 Sum_probs=19.8
Q ss_pred eEeecCchhHHHHHHHHHHhh
Q 005046 522 KIYSSDEGRVQMSAAAFAKGL 542 (716)
Q Consensus 522 kIysSdEgRVq~tAaafakg~ 542 (716)
.||||+-.||+.||++++.++
T Consensus 53 ~i~sSpl~Ra~qTA~~i~~~~ 73 (265)
T 3e9c_A 53 NVFVSNLQRAIQTAEIILGNN 73 (265)
T ss_dssp EEEECSSHHHHHHHHHHHHTC
T ss_pred EEEECCcHHHHHHHHHHHHhc
Confidence 599999999999999999886
No 105
>3d4i_A STS-2 protein; PGM, 2H-phosphatase, PTP, SH3 domain, hydrolase; 1.95A {Mus musculus} PDB: 3d6a_A 3db1_A
Probab=41.23 E-value=15 Score=36.43 Aligned_cols=21 Identities=19% Similarity=0.241 Sum_probs=19.6
Q ss_pred eEeecCchhHHHHHHHHHHhh
Q 005046 522 KIYSSDEGRVQMSAAAFAKGL 542 (716)
Q Consensus 522 kIysSdEgRVq~tAaafakg~ 542 (716)
.||||+-.|++.||+++++++
T Consensus 91 ~i~sSpl~Ra~qTA~~i~~~~ 111 (273)
T 3d4i_A 91 AVFASPALRCVQTAKHILEEL 111 (273)
T ss_dssp EEEECSSHHHHHHHHHHHHHH
T ss_pred EEEECchHHHHHHHHHHHHHc
Confidence 499999999999999999875
No 106
>1yfk_A Phosphoglycerate mutase 1; alpha/beta, isomerase, hydrolase; HET: CIT; 2.70A {Homo sapiens} PDB: 1yjx_A*
Probab=40.85 E-value=14 Score=36.55 Aligned_cols=21 Identities=10% Similarity=0.074 Sum_probs=19.5
Q ss_pred eEeecCchhHHHHHHHHHHhh
Q 005046 522 KIYSSDEGRVQMSAAAFAKGL 542 (716)
Q Consensus 522 kIysSdEgRVq~tAaafakg~ 542 (716)
.||||+-.|++.||+++++++
T Consensus 54 ~i~sSpl~Ra~qTA~~i~~~~ 74 (262)
T 1yfk_A 54 ICFTSVQKRAIRTLWTVLDAI 74 (262)
T ss_dssp EEEECSCHHHHHHHHHHHHHT
T ss_pred EEEECCcHHHHHHHHHHHHhc
Confidence 599999999999999999876
No 107
>1h2e_A Phosphatase, YHFR; hydrolase, broad specificity phosphatase, DPGM homolog; 1.69A {Bacillus stearothermophilus} SCOP: c.60.1.1 PDB: 1h2f_A* 1ebb_A
Probab=40.73 E-value=13 Score=35.58 Aligned_cols=21 Identities=33% Similarity=0.461 Sum_probs=19.0
Q ss_pred eEeecCchhHHHHHHHHHHhh
Q 005046 522 KIYSSDEGRVQMSAAAFAKGL 542 (716)
Q Consensus 522 kIysSdEgRVq~tAaafakg~ 542 (716)
.||||+-.|++.||++++.++
T Consensus 50 ~i~sSpl~Ra~qTA~~i~~~~ 70 (207)
T 1h2e_A 50 AIYTSTSGRALETAEIVRGGR 70 (207)
T ss_dssp EEEECSSHHHHHHHHHHHTTC
T ss_pred EEEECccHHHHHHHHHHHhcC
Confidence 599999999999999998753
No 108
>3d8h_A Glycolytic phosphoglycerate mutase; structural genomics, malaria, glycolysis, I structural genomics consortium, SGC; 2.01A {Cryptosporidium parvum}
Probab=40.32 E-value=15 Score=36.52 Aligned_cols=21 Identities=29% Similarity=0.283 Sum_probs=19.5
Q ss_pred eEeecCchhHHHHHHHHHHhh
Q 005046 522 KIYSSDEGRVQMSAAAFAKGL 542 (716)
Q Consensus 522 kIysSdEgRVq~tAaafakg~ 542 (716)
.||||+-.|++.||++++.++
T Consensus 71 ~i~sSpl~Ra~qTA~~i~~~~ 91 (267)
T 3d8h_A 71 VVYTSVLKRAIMTTWTVLKEL 91 (267)
T ss_dssp EEEECSSHHHHHHHHHHHHHH
T ss_pred EEEECChHHHHHHHHHHHHhc
Confidence 499999999999999999876
No 109
>2qni_A AGR_C_517P, uncharacterized protein ATU0299; MCSG, in SITU proteolysis, structural genomics, PSI protein structure initiative; 1.80A {Agrobacterium tumefaciens str}
Probab=40.20 E-value=11 Score=36.69 Aligned_cols=21 Identities=29% Similarity=0.254 Sum_probs=18.9
Q ss_pred eEeecCchhHHHHHHHHHHhh
Q 005046 522 KIYSSDEGRVQMSAAAFAKGL 542 (716)
Q Consensus 522 kIysSdEgRVq~tAaafakg~ 542 (716)
.||||+-.|++.||+++++.+
T Consensus 67 ~i~sSpl~Ra~qTA~~i~~~~ 87 (219)
T 2qni_A 67 RIVSSAETKAIETAHMLAETS 87 (219)
T ss_dssp EEEECSSHHHHHHHHHHTTTT
T ss_pred EEEECCcHHHHHHHHHHHHhc
Confidence 599999999999999998754
No 110
>2hhj_A Bisphosphoglycerate mutase; isomerase; HET: NEP DG2 3PG; 1.50A {Homo sapiens} SCOP: c.60.1.1 PDB: 1t8p_A* 2f90_A* 2a9j_A* 2h4z_A* 2h52_A* 2h4x_A* 3nfy_A
Probab=39.30 E-value=16 Score=36.26 Aligned_cols=21 Identities=19% Similarity=0.134 Sum_probs=19.6
Q ss_pred eEeecCchhHHHHHHHHHHhh
Q 005046 522 KIYSSDEGRVQMSAAAFAKGL 542 (716)
Q Consensus 522 kIysSdEgRVq~tAaafakg~ 542 (716)
.||||+-.|++.||+++++++
T Consensus 54 ~i~sSpl~Ra~qTA~~i~~~~ 74 (267)
T 2hhj_A 54 LVFTSVLNRSIHTAWLILEEL 74 (267)
T ss_dssp EEEECSSHHHHHHHHHHHHHH
T ss_pred EEEECCcHHHHHHHHHHHHhc
Confidence 499999999999999999876
No 111
>4eo9_A 2,3-bisphosphoglycerate-dependent phosphoglycerat; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.45A {Mycobacterium leprae}
Probab=38.52 E-value=17 Score=36.25 Aligned_cols=21 Identities=19% Similarity=0.061 Sum_probs=19.6
Q ss_pred eEeecCchhHHHHHHHHHHhh
Q 005046 522 KIYSSDEGRVQMSAAAFAKGL 542 (716)
Q Consensus 522 kIysSdEgRVq~tAaafakg~ 542 (716)
.||||+-.|++.||+++++++
T Consensus 78 ~i~sSpl~Ra~qTA~~i~~~~ 98 (268)
T 4eo9_A 78 VLYTSLLRRAITTAHLALDTA 98 (268)
T ss_dssp EEEECSSHHHHHHHHHHHHHT
T ss_pred EEEECCcHHHHHHHHHHHHhc
Confidence 599999999999999999876
No 112
>4emb_A 2,3-bisphosphoglycerate-dependent phosphoglycerat; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.30A {Borrelia burgdorferi}
Probab=37.91 E-value=17 Score=36.19 Aligned_cols=21 Identities=19% Similarity=0.123 Sum_probs=19.6
Q ss_pred eEeecCchhHHHHHHHHHHhh
Q 005046 522 KIYSSDEGRVQMSAAAFAKGL 542 (716)
Q Consensus 522 kIysSdEgRVq~tAaafakg~ 542 (716)
.||||+-.|++.||+++++++
T Consensus 78 ~v~sSpl~Ra~qTA~~i~~~~ 98 (274)
T 4emb_A 78 IAFSSLLSRANDTLNIILREL 98 (274)
T ss_dssp EEEECSSHHHHHHHHHHHHHT
T ss_pred EEEECChHHHHHHHHHHHHhc
Confidence 499999999999999999886
No 113
>3f2i_A ALR0221 protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG, function; 2.00A {Nostoc SP}
Probab=36.51 E-value=18 Score=34.19 Aligned_cols=20 Identities=20% Similarity=0.097 Sum_probs=19.1
Q ss_pred eEeecCchhHHHHHHHHHHh
Q 005046 522 KIYSSDEGRVQMSAAAFAKG 541 (716)
Q Consensus 522 kIysSdEgRVq~tAaafakg 541 (716)
.||||+-.|++.||+++++.
T Consensus 49 ~i~sSp~~Ra~qTa~~l~~~ 68 (172)
T 3f2i_A 49 LIVTSPLIRARQTAEILLAS 68 (172)
T ss_dssp EEEECSSHHHHHHHHHHHHT
T ss_pred EEEECChHHHHHHHHHHHhc
Confidence 69999999999999999987
No 114
>3dcy_A Regulator protein; OMIM 610775, C12ORF5, tigar, TP53-induced glycolysis and apoptosis regulator, CAsp target, structural genomics medical relevance; HET: MSE; 1.75A {Homo sapiens}
Probab=33.00 E-value=19 Score=35.91 Aligned_cols=21 Identities=19% Similarity=0.181 Sum_probs=19.7
Q ss_pred eEeecCchhHHHHHHHHHHhh
Q 005046 522 KIYSSDEGRVQMSAAAFAKGL 542 (716)
Q Consensus 522 kIysSdEgRVq~tAaafakg~ 542 (716)
.||||.-.|++.||++++.++
T Consensus 58 ~v~sSpl~Ra~qTA~~i~~~~ 78 (275)
T 3dcy_A 58 HAFSSDLMRTKQTMHGILERS 78 (275)
T ss_dssp EEEECSSHHHHHHHHHHHTTC
T ss_pred EEEECChHHHHHHHHHHHHhc
Confidence 599999999999999999876
No 115
>1rii_A 2,3-bisphosphoglycerate-dependent phosphoglycerat; phosphoglyerate mutase, SH3 domain binding, structural genom TBSGC; 1.70A {Mycobacterium tuberculosis} SCOP: c.60.1.1
Probab=30.77 E-value=26 Score=35.14 Aligned_cols=21 Identities=19% Similarity=0.085 Sum_probs=19.4
Q ss_pred eEeecCchhHHHHHHHHHHhh
Q 005046 522 KIYSSDEGRVQMSAAAFAKGL 542 (716)
Q Consensus 522 kIysSdEgRVq~tAaafakg~ 542 (716)
.||||+-.|++.||++++.++
T Consensus 55 ~i~sSpl~Ra~qTA~~i~~~~ 75 (265)
T 1rii_A 55 VLYTSLLRRAITTAHLALDSA 75 (265)
T ss_dssp EEEECSCHHHHHHHHHHHHHT
T ss_pred EEEECCcHHHHHHHHHHHHHc
Confidence 599999999999999999875
No 116
>3f3k_A Uncharacterized protein YKR043C; structural genomics,, PSI-2, prote structure initiative; 1.75A {Saccharomyces cerevisiae} PDB: 3lg2_A 3oi7_A* 3ll4_A*
Probab=29.62 E-value=21 Score=35.43 Aligned_cols=21 Identities=24% Similarity=0.254 Sum_probs=19.1
Q ss_pred eEeecCchhHHHHHHHHHHhh
Q 005046 522 KIYSSDEGRVQMSAAAFAKGL 542 (716)
Q Consensus 522 kIysSdEgRVq~tAaafakg~ 542 (716)
+||||.-.|++.||++++.++
T Consensus 61 ~i~sSpl~Ra~qTA~~i~~~~ 81 (265)
T 3f3k_A 61 YIFTSPRLRARQTVDLVLKPL 81 (265)
T ss_dssp EEEECSSHHHHHHHHHHTTTS
T ss_pred EEEECCHHHHHHHHHHHHHhc
Confidence 599999999999999998765
Done!