Query 005047
Match_columns 716
No_of_seqs 370 out of 2436
Neff 7.9
Searched_HMMs 46136
Date Thu Mar 28 17:11:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005047.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/005047hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02418 delta-1-pyrroline-5-c 100.0 5E-124 1E-128 1085.0 76.4 709 2-716 3-718 (718)
2 TIGR01092 P5CS delta l-pyrroli 100.0 2E-121 4E-126 1065.7 74.9 699 11-715 4-711 (715)
3 PRK00197 proA gamma-glutamyl p 100.0 6.6E-85 1.4E-89 720.8 43.8 408 290-699 3-416 (417)
4 cd07079 ALDH_F18-19_ProA-GPR G 100.0 2.1E-83 4.6E-88 706.5 42.1 398 295-694 2-405 (406)
5 KOG2450 Aldehyde dehydrogenase 100.0 2.3E-83 5E-88 681.2 29.9 400 268-697 41-498 (501)
6 KOG2451 Aldehyde dehydrogenase 100.0 1E-82 2.2E-87 645.2 31.8 399 267-695 43-499 (503)
7 COG1012 PutA NAD-dependent ald 100.0 1.7E-79 3.7E-84 682.9 39.1 397 268-696 19-470 (472)
8 TIGR00407 proA gamma-glutamyl 100.0 2.9E-78 6.3E-83 660.1 39.3 388 300-689 1-398 (398)
9 PRK11241 gabD succinate-semial 100.0 4.7E-78 1E-82 676.8 40.2 397 268-694 31-481 (482)
10 PLN02419 methylmalonate-semial 100.0 1E-77 2.3E-82 679.2 39.6 399 268-695 134-590 (604)
11 PLN02174 aldehyde dehydrogenas 100.0 7.2E-77 1.6E-81 662.1 40.2 386 290-695 9-445 (484)
12 TIGR03374 ABALDH 1-pyrroline d 100.0 2.4E-76 5.3E-81 662.5 39.2 398 267-693 20-471 (472)
13 PLN02315 aldehyde dehydrogenas 100.0 1.1E-75 2.3E-80 660.3 39.0 403 267-695 38-495 (508)
14 PLN02766 coniferyl-aldehyde de 100.0 1.1E-75 2.4E-80 661.2 38.6 399 267-695 40-495 (501)
15 PRK13968 putative succinate se 100.0 3.7E-75 8E-80 651.9 40.0 395 268-694 12-460 (462)
16 PRK09406 gabD1 succinic semial 100.0 5.3E-75 1.2E-79 649.8 40.4 398 268-693 6-456 (457)
17 PLN02278 succinic semialdehyde 100.0 6.4E-75 1.4E-79 655.2 41.1 398 267-694 44-495 (498)
18 PLN02466 aldehyde dehydrogenas 100.0 4.1E-75 9E-80 659.1 38.8 397 268-694 78-531 (538)
19 cd07130 ALDH_F7_AASADH NAD+-de 100.0 5E-75 1.1E-79 653.9 39.0 401 268-694 17-472 (474)
20 cd07113 ALDH_PADH_NahF Escheri 100.0 6.4E-75 1.4E-79 654.0 39.2 400 268-694 20-476 (477)
21 cd07559 ALDH_ACDHII_AcoD-like 100.0 7.6E-75 1.7E-79 652.9 39.0 398 267-694 20-479 (480)
22 cd07140 ALDH_F1L_FTFDH 10-form 100.0 8.4E-75 1.8E-79 651.8 38.5 400 268-694 26-485 (486)
23 cd07117 ALDH_StaphAldA1 Unchar 100.0 1.4E-74 3E-79 649.5 40.2 397 268-694 21-474 (475)
24 cd07086 ALDH_F7_AASADH-like NA 100.0 1.7E-74 3.8E-79 650.6 40.2 401 268-694 18-476 (478)
25 cd07116 ALDH_ACDHII-AcoD Ralst 100.0 2.7E-74 5.9E-79 649.2 40.1 397 267-694 20-478 (479)
26 TIGR03216 OH_muco_semi_DH 2-hy 100.0 2.4E-74 5.1E-79 650.1 39.4 401 267-694 18-480 (481)
27 PRK13252 betaine aldehyde dehy 100.0 3.1E-74 6.7E-79 650.2 39.7 398 268-695 27-481 (488)
28 cd07142 ALDH_F2BC Arabidosis a 100.0 2E-74 4.4E-79 649.8 38.0 395 268-692 24-475 (476)
29 cd07107 ALDH_PhdK-like Nocardi 100.0 5E-74 1.1E-78 644.1 40.3 396 268-694 2-455 (456)
30 cd07148 ALDH_RL0313 Uncharacte 100.0 6.2E-74 1.4E-78 642.3 39.2 398 268-693 4-455 (455)
31 cd07085 ALDH_F6_MMSDH Methylma 100.0 1.3E-73 2.8E-78 644.1 40.3 400 267-694 20-477 (478)
32 cd07106 ALDH_AldA-AAD23400 Str 100.0 1.4E-73 2.9E-78 639.2 40.1 393 268-692 2-445 (446)
33 TIGR01780 SSADH succinate-semi 100.0 6.8E-74 1.5E-78 641.2 37.5 392 268-689 2-448 (448)
34 PRK13473 gamma-aminobutyraldeh 100.0 8.4E-74 1.8E-78 645.5 38.1 400 267-695 21-474 (475)
35 TIGR02299 HpaE 5-carboxymethyl 100.0 1.4E-73 3.1E-78 645.3 39.8 396 268-695 21-478 (488)
36 cd07151 ALDH_HBenzADH NADP+-de 100.0 2E-73 4.4E-78 640.3 40.4 397 268-694 15-464 (465)
37 PLN02467 betaine aldehyde dehy 100.0 1.5E-73 3.2E-78 643.6 38.8 400 268-695 28-489 (503)
38 PTZ00381 aldehyde dehydrogenas 100.0 1.7E-73 3.7E-78 640.2 38.7 386 290-695 6-439 (493)
39 cd07090 ALDH_F9_TMBADH NAD+-de 100.0 1.9E-73 4.1E-78 640.0 38.9 397 268-695 2-456 (457)
40 cd07143 ALDH_AldA_AN0554 Asper 100.0 2.6E-73 5.6E-78 640.1 38.4 397 268-694 27-480 (481)
41 cd07097 ALDH_KGSADH-YcbD Bacil 100.0 5.9E-73 1.3E-77 637.8 39.6 397 267-692 18-472 (473)
42 cd07144 ALDH_ALD2-YMR170C Sacc 100.0 5.4E-73 1.2E-77 639.9 39.2 397 268-694 28-483 (484)
43 cd07110 ALDH_F10_BADH Arabidop 100.0 6.6E-73 1.4E-77 635.4 39.6 395 268-692 2-455 (456)
44 cd07152 ALDH_BenzADH NAD-depen 100.0 9.3E-73 2E-77 632.0 40.4 391 273-693 1-443 (443)
45 PLN00412 NADP-dependent glycer 100.0 1.2E-72 2.7E-77 636.3 41.4 403 267-695 35-488 (496)
46 cd07147 ALDH_F21_RNP123 Aldehy 100.0 9.9E-73 2.2E-77 633.6 39.3 398 268-693 4-452 (452)
47 cd07145 ALDH_LactADH_F420-Bios 100.0 1.1E-72 2.3E-77 633.7 39.6 398 268-693 4-456 (456)
48 cd07101 ALDH_SSADH2_GabD2 Myco 100.0 9.3E-73 2E-77 633.5 39.0 395 269-693 2-454 (454)
49 cd07120 ALDH_PsfA-ACA09737 Pse 100.0 5.4E-73 1.2E-77 633.2 36.8 395 268-693 2-455 (455)
50 PLN02203 aldehyde dehydrogenas 100.0 1.9E-72 4.1E-77 629.0 40.4 386 290-695 5-444 (484)
51 cd07115 ALDH_HMSADH_HapE Pseud 100.0 1.6E-72 3.4E-77 631.9 39.5 396 269-694 3-452 (453)
52 cd07109 ALDH_AAS00426 Uncharac 100.0 1.4E-72 3E-77 632.5 38.7 393 269-692 3-453 (454)
53 cd07141 ALDH_F1AB_F2_RALDH1 NA 100.0 1.3E-72 2.9E-77 635.8 38.6 396 268-693 27-480 (481)
54 cd07094 ALDH_F21_LactADH-like 100.0 2.5E-72 5.3E-77 630.6 40.1 398 268-693 4-453 (453)
55 cd07150 ALDH_VaniDH_like Pseud 100.0 1.8E-72 4E-77 631.6 39.0 396 268-693 4-451 (451)
56 cd07124 ALDH_PutA-P5CDH-RocA D 100.0 3.7E-72 8.1E-77 635.8 41.7 427 238-694 13-511 (512)
57 cd07089 ALDH_CddD-AldA-like Rh 100.0 1.9E-72 4.2E-77 631.0 38.8 399 268-693 2-459 (459)
58 TIGR01804 BADH glycine betaine 100.0 1.3E-72 2.8E-77 634.5 37.2 392 268-689 18-467 (467)
59 cd07119 ALDH_BADH-GbsA Bacillu 100.0 2.2E-72 4.8E-77 635.0 38.5 397 268-695 18-474 (482)
60 TIGR01237 D1pyr5carbox2 delta- 100.0 4.1E-72 8.8E-77 634.9 40.5 398 268-694 51-510 (511)
61 cd07118 ALDH_SNDH Gluconobacte 100.0 2.2E-72 4.8E-77 629.6 37.6 394 269-692 3-453 (454)
62 TIGR01236 D1pyr5carbox1 delta- 100.0 4.4E-72 9.6E-77 634.5 39.3 400 267-695 50-521 (533)
63 cd07091 ALDH_F1-2_Ald2-like AL 100.0 3.4E-72 7.4E-77 632.5 37.7 397 267-693 23-476 (476)
64 TIGR03250 PhnAcAld_DH putative 100.0 7.4E-72 1.6E-76 627.4 39.7 397 268-694 22-471 (472)
65 cd07123 ALDH_F4-17_P5CDH Delta 100.0 6.8E-72 1.5E-76 633.4 39.6 399 267-694 50-519 (522)
66 cd07083 ALDH_P5CDH ALDH subfam 100.0 1.4E-71 2.9E-76 629.5 41.3 399 267-693 36-498 (500)
67 cd07108 ALDH_MGR_2402 Magnetos 100.0 8E-72 1.7E-76 626.8 39.0 395 268-692 2-456 (457)
68 PRK09847 gamma-glutamyl-gamma- 100.0 6E-72 1.3E-76 630.4 38.1 397 268-694 40-492 (494)
69 cd07138 ALDH_CddD_SSP0762 Rhod 100.0 9.4E-72 2E-76 627.3 39.2 391 268-692 19-465 (466)
70 cd07125 ALDH_PutA-P5CDH Delta( 100.0 1.5E-71 3.2E-76 631.3 41.0 424 243-696 19-509 (518)
71 cd07131 ALDH_AldH-CAJ73105 Unc 100.0 1.4E-71 3.1E-76 628.2 40.6 398 268-694 19-476 (478)
72 PRK09457 astD succinylglutamic 100.0 1.6E-71 3.4E-76 627.0 40.7 396 268-695 20-471 (487)
73 cd07088 ALDH_LactADH-AldA Esch 100.0 1.3E-71 2.7E-76 627.4 39.6 396 267-692 17-467 (468)
74 PRK03137 1-pyrroline-5-carboxy 100.0 2E-71 4.2E-76 629.7 41.2 397 267-693 54-512 (514)
75 cd07098 ALDH_F15-22 Aldehyde d 100.0 1.6E-71 3.4E-76 625.7 39.9 403 269-694 2-464 (465)
76 PRK09407 gabD2 succinic semial 100.0 1.7E-71 3.8E-76 631.0 40.0 397 269-695 38-492 (524)
77 cd07102 ALDH_EDX86601 Uncharac 100.0 2.1E-71 4.6E-76 623.2 40.1 394 269-692 2-451 (452)
78 cd07100 ALDH_SSADH1_GabD1 Myco 100.0 1.5E-71 3.2E-76 619.0 38.2 374 293-692 1-428 (429)
79 cd07136 ALDH_YwdH-P39616 Bacil 100.0 1.6E-71 3.5E-76 617.5 37.9 381 295-695 2-428 (449)
80 TIGR03240 arg_catab_astD succi 100.0 4.4E-71 9.5E-76 623.5 41.2 396 268-695 18-469 (484)
81 cd07139 ALDH_AldA-Rv0768 Mycob 100.0 1.6E-71 3.5E-76 626.7 36.9 394 268-692 19-470 (471)
82 cd07099 ALDH_DDALDH Methylomon 100.0 3.7E-71 8.1E-76 621.4 39.1 395 269-692 2-452 (453)
83 cd07112 ALDH_GABALDH-PuuC Esch 100.0 2.8E-71 6.2E-76 622.0 37.7 396 268-693 7-462 (462)
84 cd07092 ALDH_ABALDH-YdcW Esche 100.0 4.1E-71 8.9E-76 620.5 38.7 396 268-692 2-449 (450)
85 TIGR01722 MMSDH methylmalonic 100.0 7.3E-71 1.6E-75 621.1 39.8 399 267-694 20-476 (477)
86 cd07111 ALDH_F16 Aldehyde dehy 100.0 3.1E-71 6.7E-76 622.0 36.1 385 267-690 41-477 (480)
87 cd07137 ALDH_F3FHI Plant aldeh 100.0 8.7E-71 1.9E-75 611.1 37.8 375 295-693 3-432 (432)
88 cd07121 ALDH_EutE Ethanolamine 100.0 5.4E-71 1.2E-75 610.5 35.4 372 290-693 3-422 (429)
89 PF00171 Aldedh: Aldehyde dehy 100.0 2.3E-71 4.9E-76 624.0 32.8 393 268-691 12-462 (462)
90 cd07105 ALDH_SaliADH Salicylal 100.0 1.3E-70 2.9E-75 612.3 38.3 378 292-693 1-432 (432)
91 cd07114 ALDH_DhaS Uncharacteri 100.0 1.1E-70 2.4E-75 617.6 37.4 395 269-693 3-457 (457)
92 cd07135 ALDH_F14-YMR110C Sacch 100.0 1.2E-70 2.6E-75 610.7 37.2 383 290-692 4-435 (436)
93 cd07146 ALDH_PhpJ Streptomyces 100.0 2E-70 4.2E-75 613.0 39.1 395 268-692 4-450 (451)
94 cd07132 ALDH_F3AB Aldehyde deh 100.0 2.4E-70 5.3E-75 609.9 38.7 380 295-695 2-428 (443)
95 cd07133 ALDH_CALDH_CalB Conife 100.0 2.1E-70 4.5E-75 609.4 37.7 377 295-692 2-433 (434)
96 PRK15398 aldehyde dehydrogenas 100.0 2.3E-70 5E-75 610.1 37.2 378 289-695 34-454 (465)
97 cd07149 ALDH_y4uC Uncharacteri 100.0 5.3E-70 1.1E-74 612.6 40.1 397 268-692 4-452 (453)
98 cd07126 ALDH_F12_P5CDH Delta(1 100.0 8.3E-70 1.8E-74 607.0 39.4 379 268-671 17-470 (489)
99 cd07095 ALDH_SGSD_AstD N-succi 100.0 3.9E-70 8.5E-75 606.7 36.2 374 292-691 1-429 (431)
100 cd07082 ALDH_F11_NP-GAPDH NADP 100.0 9.2E-70 2E-74 612.7 39.6 399 267-693 20-472 (473)
101 cd07093 ALDH_F8_HMSADH Human a 100.0 7.1E-70 1.5E-74 611.3 38.3 395 269-693 3-455 (455)
102 TIGR01238 D1pyr5carbox3 delta- 100.0 6E-70 1.3E-74 613.2 36.2 407 243-690 24-500 (500)
103 cd07103 ALDH_F5_SSADH_GabD Mit 100.0 1.6E-69 3.5E-74 608.1 38.2 395 268-692 2-450 (451)
104 cd07104 ALDH_BenzADH-like ALDH 100.0 2.5E-69 5.5E-74 603.3 39.2 377 292-692 1-430 (431)
105 cd07128 ALDH_MaoC-N N-terminal 100.0 1.1E-69 2.3E-74 610.9 35.9 391 268-692 20-502 (513)
106 KOG2456 Aldehyde dehydrogenase 100.0 6.3E-70 1.4E-74 557.5 30.8 382 292-694 3-432 (477)
107 TIGR02278 PaaN-DH phenylacetic 100.0 1.9E-69 4E-74 625.3 38.1 395 267-693 19-495 (663)
108 PRK11904 bifunctional proline 100.0 8.4E-69 1.8E-73 640.2 41.6 428 240-695 536-1027(1038)
109 cd07081 ALDH_F20_ACDH_EutE-lik 100.0 1.4E-68 3E-73 591.0 38.2 381 293-693 1-438 (439)
110 PRK11903 aldehyde dehydrogenas 100.0 1.4E-68 3.1E-73 603.6 36.8 395 268-693 24-506 (521)
111 cd07134 ALDH_AlkH-like Pseudom 100.0 5.9E-68 1.3E-72 589.6 37.9 378 295-692 2-432 (433)
112 cd07087 ALDH_F3-13-14_CALDH-li 100.0 6E-68 1.3E-72 589.2 37.8 378 295-692 2-425 (426)
113 PRK10090 aldehyde dehydrogenas 100.0 2.4E-68 5.3E-73 586.4 33.9 353 319-695 1-408 (409)
114 PRK11563 bifunctional aldehyde 100.0 4.8E-68 1E-72 617.8 36.2 394 268-693 24-507 (675)
115 TIGR02518 EutH_ACDH acetaldehy 100.0 3.3E-67 7.1E-72 588.1 40.7 384 290-697 7-447 (488)
116 cd07077 ALDH-like NAD(P)+-depe 100.0 2.3E-66 5E-71 571.7 40.5 381 299-692 2-396 (397)
117 cd07129 ALDH_KGSADH Alpha-Keto 100.0 8E-67 1.7E-71 583.9 36.3 380 293-688 1-449 (454)
118 cd07122 ALDH_F20_ACDH Coenzyme 100.0 2.7E-66 5.9E-71 571.6 37.4 376 293-693 1-435 (436)
119 PRK11809 putA trifunctional tr 100.0 8.5E-67 1.8E-71 627.3 35.8 385 266-690 662-1111(1318)
120 PRK11905 bifunctional proline 100.0 3.1E-66 6.7E-71 624.6 38.4 389 267-695 571-1019(1208)
121 cd07084 ALDH_KGSADH-like ALDH 100.0 1.1E-65 2.4E-70 572.3 36.9 375 294-691 2-440 (442)
122 TIGR02288 PaaN_2 phenylacetic 100.0 1.5E-65 3.3E-70 576.3 37.2 366 268-655 70-516 (551)
123 PRK13805 bifunctional acetalde 100.0 3.6E-64 7.9E-69 600.9 39.1 385 290-698 11-454 (862)
124 KOG2454 Betaine aldehyde dehyd 100.0 2.5E-63 5.4E-68 502.9 21.6 419 268-708 69-547 (583)
125 cd07127 ALDH_PAD-PaaZ Phenylac 100.0 1.6E-61 3.4E-66 545.3 37.7 391 291-693 84-545 (549)
126 cd07078 ALDH NAD(P)+ dependent 100.0 1.1E-60 2.4E-65 534.3 38.2 374 295-692 2-431 (432)
127 COG0014 ProA Gamma-glutamyl ph 100.0 7.8E-59 1.7E-63 480.5 35.5 408 291-700 3-417 (417)
128 cd06534 ALDH-SF NAD(P)+-depend 100.0 6.1E-59 1.3E-63 509.2 35.4 355 299-692 2-366 (367)
129 KOG2452 Formyltetrahydrofolate 100.0 7.6E-58 1.6E-62 472.0 22.0 379 269-694 443-880 (881)
130 COG4230 Delta 1-pyrroline-5-ca 100.0 2.3E-55 4.9E-60 463.6 24.3 386 265-691 129-575 (769)
131 KOG4165 Gamma-glutamyl phospha 100.0 5.6E-50 1.2E-54 399.3 34.3 422 293-715 2-429 (433)
132 KOG2453 Aldehyde dehydrogenase 100.0 5.8E-51 1.3E-55 406.2 15.7 409 270-704 40-503 (507)
133 KOG2455 Delta-1-pyrroline-5-ca 100.0 1.2E-45 2.7E-50 380.5 24.2 387 276-691 87-544 (561)
134 COG0263 ProB Glutamate 5-kinas 100.0 8.2E-41 1.8E-45 342.6 25.5 255 11-283 3-260 (369)
135 cd04256 AAK_P5CS_ProBA AAK_P5C 100.0 9.8E-41 2.1E-45 348.1 26.5 271 9-280 3-283 (284)
136 KOG1154 Gamma-glutamyl kinase 100.0 4E-40 8.8E-45 315.9 20.2 273 7-283 2-276 (285)
137 PRK12314 gamma-glutamyl kinase 100.0 1.5E-39 3.2E-44 337.4 25.4 258 10-283 5-265 (266)
138 PRK13402 gamma-glutamyl kinase 100.0 3.5E-38 7.5E-43 338.5 24.6 252 13-283 4-258 (368)
139 cd04242 AAK_G5K_ProB AAK_G5K_P 100.0 1.5E-37 3.3E-42 321.0 24.8 247 16-280 1-250 (251)
140 PTZ00489 glutamate 5-kinase; P 100.0 3.9E-37 8.4E-42 316.8 26.0 251 10-283 4-260 (264)
141 PRK05429 gamma-glutamyl kinase 100.0 2.8E-37 6E-42 334.8 24.5 256 10-283 4-262 (372)
142 TIGR01027 proB glutamate 5-kin 100.0 7.9E-37 1.7E-41 329.9 25.3 252 15-283 1-254 (363)
143 COG0548 ArgB Acetylglutamate k 100.0 1.4E-33 2.9E-38 284.8 21.6 242 13-281 1-264 (265)
144 COG1608 Predicted archaeal kin 100.0 4.1E-32 8.9E-37 264.6 21.2 240 17-281 3-251 (252)
145 cd04241 AAK_FomA-like AAK_FomA 100.0 3.3E-32 7.1E-37 282.2 19.8 243 16-280 1-252 (252)
146 PRK12353 putative amino acid k 100.0 5.3E-31 1.1E-35 278.6 23.7 256 13-281 1-313 (314)
147 TIGR00746 arcC carbamate kinas 100.0 1.3E-30 2.7E-35 273.2 23.6 243 15-281 1-309 (310)
148 cd07080 ALDH_Acyl-CoA-Red_LuxC 100.0 1.9E-30 4E-35 287.4 24.8 317 292-646 25-390 (422)
149 cd04237 AAK_NAGS-ABP AAK_NAGS- 100.0 1.8E-30 3.9E-35 271.5 22.6 242 14-280 18-280 (280)
150 CHL00202 argB acetylglutamate 100.0 2.3E-30 5E-35 271.5 22.8 242 14-281 23-283 (284)
151 PLN02512 acetylglutamate kinas 100.0 1.2E-29 2.7E-34 268.7 25.0 245 13-281 46-308 (309)
152 PRK00942 acetylglutamate kinas 100.0 1.4E-29 3.1E-34 266.5 21.1 240 14-282 23-282 (283)
153 PRK14058 acetylglutamate/acety 100.0 1.7E-29 3.7E-34 263.3 21.4 236 16-282 1-267 (268)
154 cd04250 AAK_NAGK-C AAK_NAGK-C: 100.0 2E-29 4.3E-34 264.7 21.7 241 14-280 14-279 (279)
155 PRK12352 putative carbamate ki 100.0 1.5E-28 3.2E-33 258.0 25.2 258 13-282 1-315 (316)
156 PRK05279 N-acetylglutamate syn 100.0 7.8E-29 1.7E-33 277.0 23.0 247 14-283 25-292 (441)
157 PRK12686 carbamate kinase; Rev 100.0 1.5E-28 3.3E-33 255.9 22.8 256 13-281 1-311 (312)
158 cd02115 AAK Amino Acid Kinases 100.0 2.7E-29 5.8E-34 260.0 14.4 239 18-280 1-248 (248)
159 PRK12454 carbamate kinase-like 100.0 6.7E-28 1.5E-32 250.4 23.9 256 13-281 1-312 (313)
160 PRK00358 pyrH uridylate kinase 100.0 7.8E-28 1.7E-32 246.1 22.9 228 15-280 1-230 (231)
161 TIGR01890 N-Ac-Glu-synth amino 100.0 7.5E-28 1.6E-32 267.8 24.6 240 13-283 16-280 (429)
162 cd04239 AAK_UMPK-like AAK_UMPK 100.0 5.2E-28 1.1E-32 246.8 20.7 227 16-280 1-228 (229)
163 cd04236 AAK_NAGS-Urea AAK_NAGS 100.0 2.8E-28 6E-33 250.9 18.4 222 14-280 35-271 (271)
164 cd04249 AAK_NAGK-NC AAK_NAGK-N 100.0 5.3E-28 1.1E-32 250.4 20.3 236 17-280 1-252 (252)
165 cd04252 AAK_NAGK-fArgBP AAK_NA 100.0 8.7E-28 1.9E-32 247.5 20.6 228 18-280 2-248 (248)
166 PRK14558 pyrH uridylate kinase 100.0 1.5E-27 3.2E-32 243.7 22.1 223 15-282 1-230 (231)
167 cd04235 AAK_CK AAK_CK: Carbama 100.0 1.8E-27 3.8E-32 247.9 22.2 251 16-280 1-307 (308)
168 cd04238 AAK_NAGK-like AAK_NAGK 100.0 7.3E-28 1.6E-32 250.0 18.9 237 17-280 1-256 (256)
169 cd04251 AAK_NAGK-UC AAK_NAGK-U 100.0 1.3E-27 2.7E-32 247.6 18.6 224 17-279 1-256 (257)
170 cd04246 AAK_AK-DapG-like AAK_A 100.0 2.1E-27 4.6E-32 244.0 20.0 222 16-265 1-233 (239)
171 cd04234 AAK_AK AAK_AK: Amino A 100.0 3.3E-27 7.2E-32 240.4 20.6 208 16-265 1-220 (227)
172 cd04261 AAK_AKii-LysC-BS AAK_A 100.0 3.1E-27 6.7E-32 242.7 19.8 222 16-265 1-233 (239)
173 TIGR00761 argB acetylglutamate 99.9 4.4E-27 9.5E-32 240.5 19.3 215 16-258 1-231 (231)
174 TIGR02075 pyrH_bact uridylate 99.9 1.8E-26 3.9E-31 235.8 23.5 229 14-281 1-233 (233)
175 cd04255 AAK_UMPK-MosAB AAK_UMP 99.9 1.8E-26 3.9E-31 238.0 22.5 227 16-280 32-261 (262)
176 PRK14556 pyrH uridylate kinase 99.9 1.6E-26 3.5E-31 233.4 21.6 240 2-282 4-248 (249)
177 cd04254 AAK_UMPK-PyrH-Ec UMP k 99.9 1.5E-26 3.2E-31 236.2 20.8 228 15-280 1-230 (231)
178 cd04260 AAK_AKi-DapG-BS AAK_AK 99.9 1.6E-26 3.6E-31 237.7 19.9 221 16-264 1-237 (244)
179 PF00696 AA_kinase: Amino acid 99.9 4E-27 8.8E-32 242.9 15.4 229 15-260 1-242 (242)
180 PLN02825 amino-acid N-acetyltr 99.9 2.2E-26 4.8E-31 255.7 21.4 248 13-283 16-365 (515)
181 PRK14557 pyrH uridylate kinase 99.9 1.1E-25 2.4E-30 230.2 22.9 233 12-283 2-239 (247)
182 PRK12354 carbamate kinase; Rev 99.9 1.6E-25 3.5E-30 232.1 22.4 249 15-283 1-301 (307)
183 PRK08841 aspartate kinase; Val 99.9 2E-25 4.3E-30 243.4 23.1 230 14-281 1-241 (392)
184 COG0528 PyrH Uridylate kinase 99.9 2.4E-25 5.1E-30 218.1 21.1 231 12-281 3-237 (238)
185 PRK04531 acetylglutamate kinas 99.9 4.1E-25 9E-30 240.0 22.2 211 14-283 36-250 (398)
186 TIGR02076 pyrH_arch uridylate 99.9 5E-25 1.1E-29 223.8 20.8 218 17-280 1-220 (221)
187 cd04253 AAK_UMPK-PyrH-Pf AAK_U 99.9 8.1E-25 1.8E-29 222.0 21.1 217 16-280 1-220 (221)
188 TIGR00656 asp_kin_monofn aspar 99.9 4.9E-25 1.1E-29 243.8 20.0 230 16-283 2-244 (401)
189 PRK08210 aspartate kinase I; R 99.9 1.2E-24 2.7E-29 240.4 21.0 232 14-283 1-248 (403)
190 PRK06635 aspartate kinase; Rev 99.9 1.6E-24 3.5E-29 239.9 21.1 232 14-283 1-243 (404)
191 PRK09411 carbamate kinase; Rev 99.9 6.6E-24 1.4E-28 218.1 22.2 242 15-281 2-296 (297)
192 COG0527 LysC Aspartokinases [A 99.9 1.5E-23 3.3E-28 230.4 21.0 239 15-283 2-290 (447)
193 COG0549 ArcC Carbamate kinase 99.9 1.4E-22 3.1E-27 201.8 24.3 255 15-281 1-311 (312)
194 PRK07431 aspartate kinase; Pro 99.9 2.1E-23 4.5E-28 241.1 21.4 234 14-283 1-245 (587)
195 cd04244 AAK_AK-LysC-like AAK_A 99.9 5.4E-22 1.2E-26 209.0 20.2 228 16-265 1-291 (298)
196 TIGR00657 asp_kinases aspartat 99.9 5.2E-22 1.1E-26 222.0 21.0 238 16-283 2-284 (441)
197 PRK08373 aspartate kinase; Val 99.9 7.9E-22 1.7E-26 209.6 21.0 235 13-283 2-280 (341)
198 TIGR02078 AspKin_pair Pyrococc 99.9 7.9E-22 1.7E-26 208.5 16.9 232 16-283 1-271 (327)
199 cd04245 AAK_AKiii-YclM-BS AAK_ 99.9 5.9E-21 1.3E-25 199.1 20.9 226 16-265 1-281 (288)
200 cd04257 AAK_AK-HSDH AAK_AK-HSD 99.9 3.6E-21 7.8E-26 202.0 19.0 228 16-265 1-287 (294)
201 cd04259 AAK_AK-DapDC AAK_AK-Da 99.9 4.6E-21 9.9E-26 201.1 19.2 229 16-265 1-288 (295)
202 cd04243 AAK_AK-HSDH-like AAK_A 99.9 3.7E-21 8.1E-26 201.8 18.2 227 16-265 1-286 (293)
203 PRK06291 aspartate kinase; Pro 99.9 1E-20 2.2E-25 212.2 21.1 238 16-283 2-304 (465)
204 PRK09084 aspartate kinase III; 99.8 2.2E-20 4.8E-25 208.0 19.7 234 16-283 1-290 (448)
205 cd04258 AAK_AKiii-LysC-EC AAK_ 99.8 9.4E-20 2E-24 190.5 19.6 225 16-265 1-285 (292)
206 PRK05925 aspartate kinase; Pro 99.8 1.2E-19 2.6E-24 200.4 18.2 236 14-283 1-281 (440)
207 cd04247 AAK_AK-Hom3 AAK_AK-Hom 99.8 2.8E-19 6.1E-24 187.7 18.5 165 93-282 126-305 (306)
208 PRK09034 aspartate kinase; Rev 99.8 3.3E-19 7.2E-24 199.1 20.3 235 16-283 1-290 (454)
209 PLN02551 aspartokinase 99.8 6.3E-19 1.4E-23 198.1 20.8 236 15-283 52-349 (521)
210 PRK09466 metL bifunctional asp 99.8 3.2E-18 7E-23 201.5 18.3 237 13-282 9-300 (810)
211 PRK09436 thrA bifunctional asp 99.8 5.7E-18 1.2E-22 201.0 18.6 237 16-283 1-298 (819)
212 cd04240 AAK_UC AAK_UC: Unchara 99.8 1.1E-17 2.3E-22 167.1 17.3 201 18-280 1-203 (203)
213 PRK08961 bifunctional aspartat 99.8 5.6E-18 1.2E-22 203.3 17.8 232 13-265 6-297 (861)
214 PRK09181 aspartate kinase; Val 99.6 2.8E-15 6.1E-20 167.1 15.6 162 93-283 140-312 (475)
215 cd04248 AAK_AK-Ectoine AAK_AK- 99.6 8.8E-15 1.9E-19 151.6 17.6 153 93-265 134-297 (304)
216 KOG0456 Aspartate kinase [Amin 99.5 6.2E-13 1.3E-17 137.2 13.3 167 93-283 193-376 (559)
217 PF05893 LuxC: Acyl-CoA reduct 99.3 1.3E-09 2.7E-14 119.9 29.8 244 396-645 81-368 (399)
218 COG2054 Uncharacterized archae 99.3 7.8E-11 1.7E-15 110.4 16.8 94 174-282 116-210 (212)
219 KOG2436 Acetylglutamate kinase 99.2 8.9E-11 1.9E-15 126.3 11.4 243 14-283 95-360 (520)
220 KOG2449 Methylmalonate semiald 98.9 9.6E-10 2.1E-14 98.3 2.2 68 587-654 76-143 (157)
221 PF07368 DUF1487: Protein of u 98.4 1.4E-06 3.1E-11 85.7 11.1 133 515-654 8-171 (215)
222 PRK11905 bifunctional proline 97.9 3.7E-05 8E-10 95.3 10.1 102 392-510 1068-1175(1208)
223 PF00815 Histidinol_dh: Histid 95.7 3.5 7.6E-05 45.4 23.6 282 363-693 69-378 (412)
224 cd06572 Histidinol_dh Histidin 93.9 12 0.00026 41.1 26.0 283 363-693 56-365 (390)
225 COG0141 HisD Histidinol dehydr 93.7 3.8 8.2E-05 44.9 17.3 224 392-654 106-349 (425)
226 TIGR00069 hisD histidinol dehy 93.4 14 0.0003 40.6 21.1 254 392-693 78-361 (393)
227 PRK13770 histidinol dehydrogen 93.3 15 0.00033 40.5 23.5 278 363-693 76-382 (416)
228 PRK12447 histidinol dehydrogen 92.7 14 0.00031 40.9 20.1 253 392-692 105-386 (426)
229 PLN02926 histidinol dehydrogen 91.2 28 0.00061 38.7 25.0 257 392-693 110-395 (431)
230 PRK00877 hisD bifunctional his 90.8 31 0.00067 38.4 25.0 281 363-693 84-392 (425)
231 PRK13769 histidinol dehydrogen 89.5 36 0.00077 37.1 25.4 213 392-653 83-303 (368)
232 PRK11809 putA trifunctional tr 80.7 3.8 8.3E-05 52.0 7.6 92 393-500 1178-1269(1318)
233 COG1778 Low specificity phosph 72.8 4.4 9.5E-05 38.4 3.8 57 194-269 11-67 (170)
234 PF03437 BtpA: BtpA family; I 53.0 41 0.00088 34.9 6.9 116 174-300 123-252 (254)
235 TIGR02726 phenyl_P_delta pheny 46.3 46 0.00099 32.2 5.8 59 194-273 10-70 (169)
236 PF13376 OmdA: Bacteriocin-pro 40.1 40 0.00088 26.7 3.6 35 290-324 7-41 (63)
237 cd01390 HMGB-UBF_HMG-box HMGB- 39.5 66 0.0014 25.1 4.9 35 298-332 30-64 (66)
238 TIGR01689 EcbF-BcbF capsule bi 37.2 59 0.0013 29.9 4.7 47 14-60 1-48 (126)
239 PF09011 HMG_box_2: HMG-box do 36.4 88 0.0019 25.4 5.3 36 297-332 33-68 (73)
240 PF10686 DUF2493: Protein of u 33.1 1.2E+02 0.0026 24.8 5.4 44 15-67 3-47 (71)
241 COG0279 GmhA Phosphoheptose is 32.5 3.8E+02 0.0081 26.0 9.2 107 36-153 25-141 (176)
242 PTZ00174 phosphomannomutase; P 32.0 84 0.0018 32.2 5.5 44 13-61 4-47 (247)
243 PF06945 DUF1289: Protein of u 31.6 54 0.0012 24.9 2.9 22 305-326 28-49 (51)
244 PF00505 HMG_box: HMG (high mo 31.3 1E+02 0.0022 24.3 4.8 36 298-333 30-65 (69)
245 smart00398 HMG high mobility g 30.9 1.2E+02 0.0027 23.6 5.3 35 299-333 32-66 (70)
246 COG0434 SgcQ Predicted TIM-bar 28.3 1.1E+02 0.0024 31.3 5.2 63 240-302 191-259 (263)
247 cd01388 SOX-TCF_HMG-box SOX-TC 27.0 1.4E+02 0.003 24.1 4.9 34 298-331 31-64 (72)
248 PRK15126 thiamin pyrimidine py 25.9 1.2E+02 0.0026 31.3 5.5 43 13-60 1-43 (272)
249 PRK10976 putative hydrolase; P 24.4 1.3E+02 0.0028 30.9 5.4 42 14-60 2-43 (266)
250 PLN03017 trehalose-phosphatase 23.7 1.9E+02 0.004 31.8 6.4 66 178-271 98-166 (366)
251 cd00084 HMG-box High Mobility 23.6 2E+02 0.0044 22.0 5.3 34 298-331 30-63 (66)
252 PRK10513 sugar phosphate phosp 23.3 1.3E+02 0.0029 30.9 5.2 42 14-60 3-44 (270)
253 PRK01158 phosphoglycolate phos 20.5 1.7E+02 0.0038 29.1 5.3 43 14-61 3-45 (230)
254 COG1206 Gid NAD(FAD)-utilizing 20.4 4.2E+02 0.0091 28.7 7.9 108 448-566 78-210 (439)
255 PF03740 PdxJ: Pyridoxal phosp 20.2 8.9E+02 0.019 24.9 10.0 101 136-281 112-213 (239)
256 PRK10530 pyridoxal phosphate ( 20.0 1.9E+02 0.004 29.7 5.5 42 14-60 3-44 (272)
No 1
>PLN02418 delta-1-pyrroline-5-carboxylate synthase
Probab=100.00 E-value=4.9e-124 Score=1084.97 Aligned_cols=709 Identities=84% Similarity=1.236 Sum_probs=614.4
Q ss_pred CchhhhHHhhcccCeEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhcccCCcc
Q 005047 2 DSTDSSRAFVKDVKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLA 81 (716)
Q Consensus 2 ~~~~~~~~~~~~~~~iVIKiGGs~l~~~~~~~~~~~~~~~a~~I~~l~~~G~~vvIVhGGg~~i~~~~~~~~~~~~~~~~ 81 (716)
..-+-.|..++++|++||||||++|++.++.++.+.+.+++++|+.+++.|+++|||.+|+..+|...++........+.
T Consensus 3 ~~~~~~~~~~~~~~~iViK~G~ssl~~~~~~~~~~~i~~l~~~i~~l~~~g~~vvlVsSga~~~g~~~l~~~~~~~~~~~ 82 (718)
T PLN02418 3 EEEDRSRAFLRDVKRVVIKVGTAVVTRDDGRLALGRLGALCEQIKELNSDGYEVILVSSGAVGVGRQRLRYRRLVNSSFA 82 (718)
T ss_pred ccccchhhHHhhCCEEEEEeCCCeecCCCCCccHHHHHHHHHHHHHHHHCCCEEEEEecchHHHHHHHHhhhhhhhcccc
Confidence 34445566677889999999999999988889999999999999999999999999999999999877654332111111
Q ss_pred cccccccchhHHHHHHhchHHHHHHHHHHhccCCCccceEEecCccCCchhhHhHHHHHHHHHHhCCCeEEeeCCCceec
Q 005047 82 DLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVST 161 (716)
Q Consensus 82 ~~~~~~~~l~~~~~~a~g~~~~~~~~~~~l~~~gi~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~g~iPV~~g~d~v~~ 161 (716)
++......+.+++++++||..++.+|+..|..+|+++.|+++|+++|.++..+.+..+.|+.+|+.|+|||+++||.+.+
T Consensus 83 ~~~~~~~~~~~qa~aa~Gq~~l~~~~~~~f~~~g~~~~qillT~~~~~~~~~~~~~~~~l~~ll~~g~iPVv~~nd~v~~ 162 (718)
T PLN02418 83 DLQKPQMELDGKACAAVGQSELMALYDTLFSQLDVTASQLLVTDSDFRDPDFRKQLSETVESLLDLRVIPIFNENDAVST 162 (718)
T ss_pred cCCCCcchHHHHHHHHhhHHHHHHHHHHHHHHcCCeEEEEEecHhHhcchhHhHhHHHHHHHHHHCCCEEEEcCCCCccc
Confidence 11111123455789999999999999999999999999999999999887777778899999999999999999998886
Q ss_pred CCCCCCCCCceeecchHHHHHHHhhcCCCEEEEeecCCccccCCCcccccccccccchhchHHHHhcCCCCCcccCCcHH
Q 005047 162 RKAPYEDSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTA 241 (716)
Q Consensus 162 ~~~~~~~~g~~~~~sD~~A~~lA~~L~Ad~Li~~TDVdGVy~~dP~~p~a~~i~~is~~e~~~~~~~g~~~~~~~ggM~~ 241 (716)
....+......++++|++|++||.+++||+|+|+|||||||++||++|++++|++++..+....+..++.+.+++|||.+
T Consensus 163 ~~~~~~~~~~~~~d~D~~A~~lA~~l~Ad~li~~TdVdGvy~~~p~~~~a~~i~~i~~~~~~~~i~~~~~s~~~tGGM~~ 242 (718)
T PLN02418 163 RRAPYEDSSGIFWDNDSLAALLALELKADLLILLSDVEGLYTGPPSDPSSKLIHTYIKEKHQDEITFGEKSRVGRGGMTA 242 (718)
T ss_pred cccccccccCeecCcHHHHHHHHHHcCCCEEEEeecCCeeecCCCCCCCceEcceecccchhhhhhcccccccCCCCcHH
Confidence 43211111224588999999999999999999999999999999988999999999877765444455556689999999
Q ss_pred HHHHHHHHHHcCCcEEEeeCCCcchHHHHhcCCcceeEEecCCcccc-c-hhhHHHHHHHHHHHHHHHhcCCHHHHHHHH
Q 005047 242 KVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRDAHLWV-K-QVGAREMAVAARESSRRLQALQSQDRRKIL 319 (716)
Q Consensus 242 Kl~aa~~a~~~gi~v~I~~g~~~~~l~~~~tg~~iGT~i~~~~~~~~-~-~~~v~~av~~A~~a~~~w~~~~~~~R~~~L 319 (716)
|+++|..+.++|++++|+||..|+.+.+++.|+..||++.++.|.|. . .+++++++++|++||+.|+++|.++|.++|
T Consensus 243 Kl~Aa~~a~~~Gi~v~I~~g~~~~~l~~~l~g~~~GT~i~~~~~~~~~~~~~~~~~~~~aA~~A~~~W~~~~~~eR~~~L 322 (718)
T PLN02418 243 KVKAAVNAASAGIPVVITSGYALDNIRKVLRGERVGTLFHQDAHLWAPSKEVGAREMAVAARESSRKLQALSSEERKKIL 322 (718)
T ss_pred HHHHHHHHHHCCCcEEEeCCCCcchHHHHhcCCCCceEeccccchhhhccHHHHHHHHHHHHHHHHHHHhCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999877765 2 246999999999999999999999999999
Q ss_pred HHHHHHHHhCHHHHHHHHHHHHHHHHHhchhHHHHHHhhcCHHHHHHHHHHHHHHhcccccccccccccccCCCeEEEEe
Q 005047 320 LDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRILADMEEPIGQILKRTELADGLILEKT 399 (716)
Q Consensus 320 ~~~a~~l~~~~~el~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 399 (716)
++++++|++|+++|++++.+|++.++|+|++..+.+.+..+..++..+++.+++++.+.++.|+..+......+...+++
T Consensus 323 ~~~a~~l~~~~~ela~~~~~d~~~~~E~G~~k~~~~~~~~~~~ev~~~~~~~~~~a~~~~~~g~~~~~~~~~~~~~~~~~ 402 (718)
T PLN02418 323 LDVADALEANEELIKAENELDVAAAQEAGYEKSLVSRLTLKPGKIASLAASIRQLADMEDPIGRVLKRTEVADGLVLEKT 402 (718)
T ss_pred HHHHHHHHHhHHHHHHHHHHhHHHHHHhCCchhHHHHHhccHHHHHHHHHHHHHHhcCccccCccccccccCCCceEEEE
Confidence 99999999999999999988888888888555444443344568999999999999876566655431111234456889
Q ss_pred ecceeEEEEEcCCCchhHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccccCcCc----eEEecCCchHHHh
Q 005047 400 SCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDTVGEKL----IGLVTSREEIPDL 475 (716)
Q Consensus 400 ~~PlGVv~~I~p~~P~~~~~~~~~ALaaGNtvv~Kps~~tp~t~~~l~~l~~~al~~alP~gv----v~vv~~~~~~~~~ 475 (716)
|+|+|||++|+||||.+++++++|||++||+||+||||.||+|+.+|++++++ +||+|+ +|+|+|+++++++
T Consensus 403 r~PlGVV~~I~PwnP~~~~~kiapALaaGNtVVlKPse~tp~s~~~l~~l~~e----AlP~gv~~~v~nvv~g~~~~g~~ 478 (718)
T PLN02418 403 SCPLGVLLIIFESRPDALVQIASLAIRSGNGLLLKGGKEAARSNAILHKVITD----AIPKTVGGKLIGLVTSRDEIPDL 478 (718)
T ss_pred EEeeeEEEEEeCCCcHHHHHHHHHHHHhCCEEEEeCCccchHHHHHHHHHHHH----HccccCCcceEEEeCCcHHHHHH
Confidence 99999999999999976559999999999999999999999999999999987 488885 9999976678999
Q ss_pred hcCCCCccEEEeecCHHHHHHHHHhcCCCEEEecCCcceEEEcCCCCHHHHHHHHHHhcCCCCCccccccceEEEeCccC
Q 005047 476 LKLDDVIDLVIPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMVETLLVHKDLA 555 (716)
Q Consensus 476 l~~~~~v~~v~fTGs~~~g~~i~~~a~~~~~lElGGk~p~iV~~dADl~~Aa~~iv~~~f~n~g~C~a~~~rv~V~~~i~ 555 (716)
|..||+||+|+||||++.++.+++.+.||++||||||||+||++|||+|.|++.+++|+|.|+|+|+|. +|+|||++||
T Consensus 479 L~~~~~v~~V~FTGSt~~i~~~aa~~~k~v~lELGGk~p~iV~~DADld~A~~~i~~~~~~nGQ~C~a~-~RllVh~~i~ 557 (718)
T PLN02418 479 LKLDDVIDLVIPRGSNKLVSQIKASTKIPVLGHADGICHVYVDKSADMDMAKRIVVDAKTDYPAACNAM-ETLLVHKDLV 557 (718)
T ss_pred HhhCCCCCEEEEeCCHHHHHHHHHhcCCCEEEeCCCcceEEEeCCCCHHHHHHHHHHHhCCCCCccccC-cEEEEecccc
Confidence 999999999999999999998888778999999999999999999999999999999999996699999 9999999999
Q ss_pred Chh-hHHHHHHHHHhcCCEEecCccccccccCCCCccccccccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEccCHHH
Q 005047 556 CNG-ALNELVVELQHEGVGLFGGPRASKLLQIPETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKV 634 (716)
Q Consensus 556 dd~-f~~~l~~~~~~~~~~~~g~~~~~~~~pv~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~i~t~d~~~ 634 (716)
|+ .+..+++.+.+.|+++.|+++..+++.+++|++|+||+||||++|.+|+|+||||+++|+++|||+++|||+|.++
T Consensus 558 -d~G~~~~~i~~a~~~Ga~l~Gg~~~~g~l~~~~~~i~~eE~FgPv~~i~~~~~~dEAI~~aN~s~yGLsa~V~T~d~~~ 636 (718)
T PLN02418 558 -QNGGLNDLLVALRSAGVTLYGGPRASKLLNIPEAQSFHHEYSSLACTVEIVDDVHAAIDHIHRHGSAHTDCIVTEDSEV 636 (718)
T ss_pred -ccccHHHHHHHHHHCCCEEECCccccCeeCCCCchhhhCCcCCeeEEEEEECCHHHHHHHHhcCCCCCeeEEEcCCHHH
Confidence 68 7888999999999998877543244333678999999999999999999999999999999999999999999999
Q ss_pred HHHHHHccCcceEEEcCCcCCCCCCcccCcceeeccccccccccccchhcccEEEEEEEcCceeeeCCCCceeeeccccC
Q 005047 635 AETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHVVDGDQGVVYTHKNLAL 714 (716)
Q Consensus 635 a~~~~~~~~~G~v~vN~~~~~~~~~p~g~g~~sG~~~~~~~~~g~~gl~~ft~~k~v~~~~~~~~~~~~~~~~~~~~~~~ 714 (716)
+++|++++++|+||||.++.+.+..||||+++||+|+|+.+++|++|+++||+.|+|+++.|++|+++++.+|+|+.|||
T Consensus 637 a~~~a~~l~aG~V~IN~~~~~~~~~PfGG~k~SG~stGr~~~~G~~gl~~~t~~K~v~~g~g~~~~~~~~~~~~~~~~~~ 716 (718)
T PLN02418 637 AEIFLRQVDSAAVFHNASTRFSDGARFGLGAEVGISTGRIHARGPVGVEGLLTTRWILRGNGQVVDGDKGVVYTHKDLPL 716 (718)
T ss_pred HHHHHHhCCeeEEEEeCCCCCCCCCCCCCcccccccCCcCCCCCHHHHHHHhcEEEEEECCCeecCCCCCcccccccccC
Confidence 99999999999999999877667789999999999766666679999999999999999999999999999999999999
Q ss_pred CC
Q 005047 715 QS 716 (716)
Q Consensus 715 ~~ 716 (716)
||
T Consensus 717 ~~ 718 (718)
T PLN02418 717 QS 718 (718)
T ss_pred CC
Confidence 97
No 2
>TIGR01092 P5CS delta l-pyrroline-5-carboxylate synthetase. This protein contains a glutamate 5-kinase (ProB, EC 2.7.2.11) region followed by a gamma-glutamyl phosphate reductase (ProA, EC 1.2.1.41) region.
Probab=100.00 E-value=2e-121 Score=1065.67 Aligned_cols=699 Identities=75% Similarity=1.104 Sum_probs=612.9
Q ss_pred hcccCeEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhcccCCcccccccccch
Q 005047 11 VKDVKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNEL 90 (716)
Q Consensus 11 ~~~~~~iVIKiGGs~l~~~~~~~~~~~~~~~a~~I~~l~~~G~~vvIVhGGg~~i~~~~~~~~~~~~~~~~~~~~~~~~l 90 (716)
+++.+++|||||||+|+++++.++.+.+.+++++|+.|++.|+++|||.||+.++|+..++.+......+.++......+
T Consensus 4 ~~~~~~iViKiGss~lt~~~~~~~~~~l~~l~~~i~~l~~~g~~vilVsSGA~a~G~~~~~~~~~~~~~~~~~~~~~~~~ 83 (715)
T TIGR01092 4 LKDVKRIVVKVGTAVVTRGDGRLALGRLGSICEQLSELNSDGREVILVTSGAVAFGRQRLRHRILVNSSFADLQKPQPEL 83 (715)
T ss_pred hhcCCEEEEEeCcceeECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEccchHHhchHHhccchhccccccccCCCCchH
Confidence 45679999999999999988889999999999999999999999999999999999987765432222222333334456
Q ss_pred hHHHHHHhchHHHHHHHHHHhccCCCccceEEecCccCCchhhHhHHHHHHHHHHhCCCeEEeeCCCceecCCCCCCCCC
Q 005047 91 DGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSS 170 (716)
Q Consensus 91 ~~~~~~a~g~~~~~~~~~~~l~~~gi~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~g~iPV~~g~d~v~~~~~~~~~~g 170 (716)
++++++++||..++.+|+..|..+++++.|+++|++||.++..+.+..+.++.||+.|+|||+++||++.+.+.++++..
T Consensus 84 ~~qa~aa~gq~~L~~~y~~~f~~~~i~~aQ~Llt~~d~~~~~~~~~~~~~l~~lL~~g~iPVin~nD~V~~~~~~~~~~~ 163 (715)
T TIGR01092 84 DGKACAAVGQSGLMALYETMFTQLDITAAQILVTDLDFRDEQFRRQLNETVHELLRMNVVPVVNENDAVSTRAAPYSDSQ 163 (715)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCeeEEEEechhhcccHHHHHHHHHHHHHHHHCCCEEEEcCCCccccccccccccc
Confidence 78899999999999999999999999999999999999888888888899999999999999999999998654333223
Q ss_pred ceeecchHHHHHHHhhcCCCEEEEeecCCccccCCCcccccccccccchhchHHHHhcCCCCCcccCCcHHHHHHHHHHH
Q 005047 171 GIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAA 250 (716)
Q Consensus 171 ~~~~~sD~~A~~lA~~L~Ad~Li~~TDVdGVy~~dP~~p~a~~i~~is~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a~ 250 (716)
+.++|+|++|++||.+|+||+|+|+|||||||++||++|++++|++++..+..+.+..+..+.+++|||.+||++|..+.
T Consensus 164 g~~~d~D~lAa~lA~~l~Ad~LiilTDVdGVy~~dP~~~~a~~I~~i~~~~~~~~i~~~~~~~~~tGGM~~Kl~aa~~a~ 243 (715)
T TIGR01092 164 GIFWDNDSLAALLALELKADLLILLSDVEGLYDGPPSDDDSKLIDTFYKEKHQGEITFGTKSRLGRGGMTAKVKAAVWAA 243 (715)
T ss_pred ceecchHHHHHHHHHHcCCCEEEEEeCCCeeeCCCCCCCCCeEeeeecccchhhhhccCcccccCCCCchHHHHHHHHHH
Confidence 34799999999999999999999999999999999988999999999987666445455455688999999999999999
Q ss_pred HcCCcEEEeeCCCcchHHHHhcCCcceeEEecCCccccch--hhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHh
Q 005047 251 CAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRDAHLWVKQ--VGAREMAVAARESSRRLQALQSQDRRKILLDVADALEA 328 (716)
Q Consensus 251 ~~gi~v~I~~g~~~~~l~~~~tg~~iGT~i~~~~~~~~~~--~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~ 328 (716)
++|++++|+||..++.|.+++.|+..||++..+.|-|... +++++++++|++||++|+++|.++|.++|++++++|++
T Consensus 244 ~~gi~v~I~~g~~~~~l~~~l~g~~~GT~~~~~~~~~~~~~~~~~~~~~~~A~~A~~~w~~~~~~~R~~~L~~la~~l~~ 323 (715)
T TIGR01092 244 YGGTPVIIASGTAPKNITKVVEGKKVGTLFHEDAHLWPTVEQTGERDMAVAARESSRMLQALSSEQRKEILHDIADALED 323 (715)
T ss_pred HCCCeEEEeCCCCcchHHHHhcCCCCceEecccchhhhhhhHHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999998999998875443211 35889999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHHHhchhHHHHHHhhcCHHHHHHHHHHHHHHhcccccccccccccccCCCeEEEEeecceeEEEE
Q 005047 329 NESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLI 408 (716)
Q Consensus 329 ~~~el~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~PlGVv~~ 408 (716)
|+++|++++.+|+..+++.+..+..+.++..+..++..+++.+++|++..++.|...+......+...+.+|+|+|||++
T Consensus 324 ~~eei~~e~gkdl~~a~~~~~~~~~~~el~~~~~ei~~~~~~l~~~a~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVV~~ 403 (715)
T TIGR01092 324 NEDEILAENKKDVAAAQGAGYAASLVARLSMSPSKISSLAISLRQLAAMEDPIGRVLKRTRIADNLILEKTSVPIGVLLI 403 (715)
T ss_pred HHHHHHHHHhhhHHHHHhcCcchhHHHHHhCCHHHHHHHHHHHHHHhcCCCcccccccccccCCCceeEEEEeeceEEEE
Confidence 99999999999998877666667778899999999999999999999855556654422111223446788999999999
Q ss_pred EcCCCchhHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccccCcC----ceEEecCCchHHHhhcCCCCccE
Q 005047 409 VFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDTVGEK----LIGLVTSREEIPDLLKLDDVIDL 484 (716)
Q Consensus 409 I~p~~P~~~~~~~~~ALaaGNtvv~Kps~~tp~t~~~l~~l~~~al~~alP~g----vv~vv~~~~~~~~~l~~~~~v~~ 484 (716)
|+||||.+++++++|||+|||+||+||||.||+|+.+|++++++ +||+| ++|+|+++++++++|..||+||+
T Consensus 404 I~PwNP~~~~~~~~~ALaaGN~vvlKpse~tp~t~~~l~~l~~~----alp~g~~~~~~~~v~~~~~~~~~l~~~~~vd~ 479 (715)
T TIGR01092 404 VFESRPDALVQIASLAIRSGNGLLLKGGKEAARSNAILHKVITE----AIPIHVGKKLIGLVTSREEIPDLLKLDDVIDL 479 (715)
T ss_pred EeCCChHHHHHHHHHHHHhCCEEEEcCcccchHHHHHHHHHHHH----HcCCCCCCcEEEEeCChHHHHHHHhcCCCccE
Confidence 99999976679999999999999999999999999999999997 46765 78999876778899999999999
Q ss_pred EEeecCHHHHHHHHHhcCCCEEEecCCcceEEEcCCCCHHHHHHHHHHhcCCCCCccccccceEEEeCccCChh-hHHHH
Q 005047 485 VIPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMVETLLVHKDLACNG-ALNEL 563 (716)
Q Consensus 485 v~fTGs~~~g~~i~~~a~~~~~lElGGk~p~iV~~dADl~~Aa~~iv~~~f~n~g~C~a~~~rv~V~~~i~dd~-f~~~l 563 (716)
|+||||+++||.|+++|.||+++|||||||+||++||||+.|++.+++++|.|+|+|+|+ +|+|||++|| |+ ++.++
T Consensus 480 I~fTGS~~vG~~i~~~A~~pv~lElgGk~p~iV~~dADl~~A~~~i~~~~~~~GQ~C~a~-~rvlV~~~i~-d~~~~~~~ 557 (715)
T TIGR01092 480 VIPRGSNKLVSQIKKSTKIPVLGHADGICHVYVDKSASVDMAKRIVRDAKCDYPAACNAM-ETLLVHKDLL-RNGLLDDL 557 (715)
T ss_pred EEEcCCHHHHHHHHHhCCCCEEEEcCCcceEEECCCCCHHHHHHHHHHHhCCCCCccccC-cEEEEehhhc-cchhHHHH
Confidence 999999999999999888999999999999999999999999988888888776699999 9999999999 57 77888
Q ss_pred HHHHHhcCCEEecCccccccccC--CCCccccccccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEccCHHHHHHHHHc
Q 005047 564 VVELQHEGVGLFGGPRASKLLQI--PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQ 641 (716)
Q Consensus 564 ~~~~~~~~~~~~g~~~~~~~~pv--~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~i~t~d~~~a~~~~~~ 641 (716)
++.+.+.|++++|+.+...++++ ++|++|+||+||||++|++|+|+||||+++|+++|||++||||+|.+++++|+++
T Consensus 558 v~~~~~~Ga~l~Gg~~~~~~~~~~~~~~~i~~eE~FGPvl~v~~~~~~deAi~~~N~~~~gLa~~ift~d~~~a~~~~~~ 637 (715)
T TIGR01092 558 IDMLRTEGVTIHGGPRFAAYLTFNISETKSFRTEYSSLACTVEIVDDVYDAIDHIHKHGSAHTDCIVTEDENVAEFFLQH 637 (715)
T ss_pred HHHHHHCCCEEECCcchhheeccCCCCchhhhccccCceEEEEEECCHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHHHh
Confidence 88888889888877543334432 4689999999999999999999999999999999999999999999999999999
Q ss_pred cCcceEEEcCCcCCCCCCcccCcceeeccccccccccccchhcccEEEEEEEcCceeeeCCCCceeeeccccCC
Q 005047 642 VDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHVVDGDQGVVYTHKNLALQ 715 (716)
Q Consensus 642 ~~~G~v~vN~~~~~~~~~p~g~g~~sG~~~~~~~~~g~~gl~~ft~~k~v~~~~~~~~~~~~~~~~~~~~~~~~ 715 (716)
+++|+||||+++.+.+..||||+++||+|+++.|++|++|+++||+.|+|.++.|++|+++++.+|+|+.||+.
T Consensus 638 i~sG~V~vN~~~~~~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~v~~g~g~~~~~~~~~~~~~~~~~~~ 711 (715)
T TIGR01092 638 VDSAAVFHNASTRFSDGFRFGLGAEVGISTSRIHARGPVGVEGLLTTRWLLRGKGQVVSGDHGLVYTHKDLPIP 711 (715)
T ss_pred CCeeEEEEeCCCCCCCCCCCcCccccccccCCCCCCChhHHHHhceEEEEEECCCeecCCCCCcceecccCCcc
Confidence 99999999998766677899999999998766667899999999999999999999999999999999999863
No 3
>PRK00197 proA gamma-glutamyl phosphate reductase; Provisional
Probab=100.00 E-value=6.6e-85 Score=720.84 Aligned_cols=408 Identities=42% Similarity=0.716 Sum_probs=372.0
Q ss_pred hhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhchhHHHHHHhhcCHHHHHHHHH
Q 005047 290 QVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAK 369 (716)
Q Consensus 290 ~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 369 (716)
.+|+++++++|++||+.|+++|..+|.++|++++++|++|+++|++++++|+++++++|+++++.+++..+..++..+++
T Consensus 3 ~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~g~~~~~g~~~~~~~~~~~~~~ev~~~~~ 82 (417)
T PRK00197 3 MEYLEELGRRAKAASRKLAQLSTAQKNRALLAIADALEANAAEILAANAKDLAAARANGLSAAMLDRLLLTEARIEGIAE 82 (417)
T ss_pred hhHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCHHHHHHhcCCHHHHHHHHH
Confidence 35899999999999999999999999999999999999999999999999999999888888877888888889999999
Q ss_pred HHHHHhcccccccccccccccCCCeEEEEeecceeEEEEEcCCCchhHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHH
Q 005047 370 SIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKV 449 (716)
Q Consensus 370 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~~P~~~~~~~~~ALaaGNtvv~Kps~~tp~t~~~l~~l 449 (716)
.+++++.+++..|...+....+.+...+++|+|+|||++|+||+|.+++++++|||++||+||+||||.||+|+.+++++
T Consensus 83 ~~~~~a~~~~~~g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~p~~~~~~~~~~ALaaGN~vVlKPs~~tp~t~~~l~~l 162 (417)
T PRK00197 83 GLRQVAALPDPVGEVLDGWTLPNGLRIGRVRVPLGVIGVIYESRPNVTVDAAALCLKSGNAVILRGGSEAIHSNRALVAV 162 (417)
T ss_pred HHHHHhhcCCCccccccceecCCCceEEEEecCceEEEEEcCCCchHHHHHHHHHHHhCCeEEEecChhhhHHHHHHHHH
Confidence 99999877665554433211122345788999999999999998888899999999999999999999999999999999
Q ss_pred HHHhcccc-cCcCceEEecC-C-chHHHhhcCCCCccEEEeecCHHHHHHHHHhcCCCEEEecCCcceEEEcCCCCHHHH
Q 005047 450 ITSAIPDT-VGEKLIGLVTS-R-EEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVA 526 (716)
Q Consensus 450 ~~~al~~a-lP~gvv~vv~~-~-~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a~~~~~lElGGk~p~iV~~dADl~~A 526 (716)
+.++++++ +|+|++|+|++ + ++++++|..||+||+|+||||+++|+.|++.+.||+++|||||||+||++|||+|.|
T Consensus 163 ~~~~l~~aGlP~gv~~~v~g~~~~~~~~~l~~~~~v~~V~fTGS~~~g~~i~~~a~~~~~lELGGk~p~IV~~dAdl~~A 242 (417)
T PRK00197 163 IQEALEEAGLPADAVQLVETTDRAAVGELLKLDGYVDVIIPRGGAGLIRRVVENATVPVIEHGDGICHIYVDESADLDKA 242 (417)
T ss_pred HHHHHHHcCcChhhEEEecCCChHHHHHHhccCCCccEEEecCCHHHHHHHHHhcCCCEEeecCCcceEEEeCCCCHHHH
Confidence 98888889 99999999994 4 558899999999999999999999999999889999999999999999999999999
Q ss_pred HHHHHHhcCCCCCccccccceEEEeCccCChhhHHHHHHHHHhcCCEEecCcccccccc-C--CCCccccccccCceEEE
Q 005047 527 KNIVIDAKIDYPAACNAMVETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLQ-I--PETRLFHHEYNSMVCTV 603 (716)
Q Consensus 527 a~~iv~~~f~n~g~C~a~~~rv~V~~~i~dd~f~~~l~~~~~~~~~~~~g~~~~~~~~p-v--~~~~~~~eE~FGPVl~v 603 (716)
++.+++|+|.|+|+|+|+ +|+|||++|| |+|+++|+++++++++++.+++...+++| | ++|++++||+||||++|
T Consensus 243 a~~iv~~~~~n~G~C~a~-~rv~V~~~i~-d~f~~~l~~~~~~~~~~~~~~~~~~~~~PTi~~~~~~i~~eE~FGPVl~v 320 (417)
T PRK00197 243 LKIVLNAKTQRPSVCNAL-ETLLVHEAIA-EEFLPKLAEALAEAGVELRGDEAALALLPDVVPATEEDWDTEYLDLILAV 320 (417)
T ss_pred HHHHHHhccCCCcccccc-eEEEEEHHHh-HHHHHHHHHHHHHCCCeEecCHHHHHhhcccccCCcchhhhhhhCceEEE
Confidence 999999999998899999 9999999999 79999999999999988776654334668 4 57899999999999999
Q ss_pred EEeCCHHHHHHHHHhcCCCceeEEEccCHHHHHHHHHccCcceEEEcCCcCCCCCCcccCcceeeccccccccccccchh
Q 005047 604 EIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVE 683 (716)
Q Consensus 604 ~~~~~~deAi~~aN~~~~GL~a~i~t~d~~~a~~~~~~~~~G~v~vN~~~~~~~~~p~g~g~~sG~~~~~~~~~g~~gl~ 683 (716)
++|+|+||||+++|+++|||++||||+|.+++++|++++++|+|+||+++...+..|||++++||+|.++.+++|++|++
T Consensus 321 ~~~~~~deAi~~aN~~~~GL~a~V~t~d~~~~~~~~~~l~~G~v~VN~~~~~~~~~p~G~~~~sG~g~~~~~~~g~~~l~ 400 (417)
T PRK00197 321 KVVDSLDEAIAHINRYGSGHTEAIVTEDYAAAERFLNEVDSAAVYVNASTRFTDGGEFGLGAEIGISTQKLHARGPMGLE 400 (417)
T ss_pred EEeCCHHHHHHHHHhcCCCCceEEEeCCHHHHHHHHHhCCeeEEEEeCCCccCCCCccccchhheeecCCCcCCCccchH
Confidence 99999999999999999999999999999999999999999999999987766778999999999986677788999999
Q ss_pred cccEEEEEEEcCceee
Q 005047 684 GLLTTRWILRGNGHVV 699 (716)
Q Consensus 684 ~ft~~k~v~~~~~~~~ 699 (716)
+||+.|+++++.++.|
T Consensus 401 ~~~~~k~v~~~~~~~~ 416 (417)
T PRK00197 401 ELTTYKYIVLGDGQIR 416 (417)
T ss_pred hhcEEEEEEECCCeeC
Confidence 9999999999999887
No 4
>cd07079 ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate reductase (GPR), aldehyde dehydrogenase families 18 and 19. Gamma-glutamyl phosphate reductase (GPR), a L-proline biosynthetic pathway (PBP) enzyme that catalyzes the NADPH dependent reduction of L-gamma-glutamyl 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The glutamate route of the PBP involves two enzymatic steps catalyzed by gamma-glutamyl kinase (GK, EC 2.7.2.11) and GPR (EC 1.2.1.41). These enzymes are fused into the bifunctional enzyme, ProA or delta(1)-pyrroline-5-carboxylate synthetase (P5CS) in plants and animals, whereas they are separate enzymes in bacteria and yeast. In humans, the P5CS (ALDH18A1), an inner mitochondrial membrane enzyme, is essential to the de novo synthesis of the amino acids proline and arginine. Tomato (Lycopersicon esculentum) has both the prokaryotic-like polycistronic operons encoding GK and GPR (PRO1, ALDH19) and the full-length, bifunctional P5CS (PRO2, ALDH18B1).
Probab=100.00 E-value=2.1e-83 Score=706.48 Aligned_cols=398 Identities=45% Similarity=0.760 Sum_probs=359.9
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhchhHHHHHHhhcCHHHHHHHHHHHHHH
Q 005047 295 EMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRIL 374 (716)
Q Consensus 295 ~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (716)
+++++|++||+.|+++|.++|.++|++++++|++|+++|++++++|+++++++|++++..+++..+..+++.+++.++++
T Consensus 2 ~~~~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~gk~~e~G~~~a~~~~l~~~~~ev~~~~~~~~~~ 81 (406)
T cd07079 2 ELAKRAKAASRALATLSTEQKNAALLAIADALEANRDEILEANAKDLAAAREAGLSEALLDRLLLTPERIEAMAEGLRQV 81 (406)
T ss_pred hHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhchHHHHHHhhhhHHHHHHcCCCHHHHhHhcCCHHHHHHHHHHHHHH
Confidence 57889999999999999999999999999999999999999999999999998888877788888888999999999999
Q ss_pred hcccccccccccccccCCCeEEEEeecceeEEEEEcCCCchhHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhc
Q 005047 375 ADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAI 454 (716)
Q Consensus 375 ~~~~~~~g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~~P~~~~~~~~~ALaaGNtvv~Kps~~tp~t~~~l~~l~~~al 454 (716)
+...+..|...+....+.+...+++|+|+|||++|+||||++++++++|||+|||+||+|||+.||+|+.++++++++++
T Consensus 82 a~~~~~~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~~p~~~~~~~~~ALaaGN~vVlKps~~tp~~~~~l~~~~~~~l 161 (406)
T cd07079 82 AALPDPVGEVLRGWTLPNGLQIEKVRVPLGVIGIIYESRPNVTVDAAALCLKSGNAVILRGGSEALHSNRALVEIIQEAL 161 (406)
T ss_pred HhcCCCCcccccceeccCccceeEEecceEEEEEecCCCcchHHHHHHHHHHhCCEEEEeCCchhhhHHHHHHHHHHHHH
Confidence 87655455433321112234567889999999999999888888999999999999999999999999999999999888
Q ss_pred ccc-cCcCceEEecC-C-chHHHhhcCCCCccEEEeecCHHHHHHHHHhcCCCEEEecCCcceEEEcCCCCHHHHHHHHH
Q 005047 455 PDT-VGEKLIGLVTS-R-EEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVI 531 (716)
Q Consensus 455 ~~a-lP~gvv~vv~~-~-~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a~~~~~lElGGk~p~iV~~dADl~~Aa~~iv 531 (716)
.++ +|+|++|+|++ + ++++++|.+||+||+|+||||+++|+.|+++|.+|+++|||||||+||++|||||.|++.++
T Consensus 162 ~~aG~P~gvv~~v~g~~~~~~~~~l~~~~~v~~i~fTGS~~~G~~i~~~a~~pv~lELGGk~p~IV~~dADl~~Aa~~i~ 241 (406)
T cd07079 162 EEAGLPEDAVQLIPDTDREAVQELLKLDDYIDLIIPRGGAGLIRFVVENATIPVIKHGDGNCHVYVDESADLEMAVRIVV 241 (406)
T ss_pred HHcCCCcccEEEecCCChHHHHHHHcCCCCccEEEeCCCHHHHHHHHHhcCCCEEeecCCcceEEEeCCCCHHHHHHHHH
Confidence 789 99999999995 4 46799999999999999999999999999988999999999999999999999999999999
Q ss_pred HhcCCCCCccccccceEEEeCccCChhhHHHHHHHHHhcCCEEecCcccccccc--C-CCCccccccccCceEEEEEeCC
Q 005047 532 DAKIDYPAACNAMVETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLQ--I-PETRLFHHEYNSMVCTVEIVDD 608 (716)
Q Consensus 532 ~~~f~n~g~C~a~~~rv~V~~~i~dd~f~~~l~~~~~~~~~~~~g~~~~~~~~p--v-~~~~~~~eE~FGPVl~v~~~~~ 608 (716)
+|+|.|+|+|+|+ +|+|||++|| |+|+++|+++++++|+++.++.+...++| + ++|++++||+||||++|++|+|
T Consensus 242 ~~~f~n~G~C~a~-~rv~V~~si~-d~f~~~l~~~~~~~ga~~~~g~~~~~~~~ptv~~d~~i~~eE~FGPVl~v~~~~~ 319 (406)
T cd07079 242 NAKTQRPSVCNAL-ETLLVHRDIA-EEFLPKLAEALREAGVELRGDEETLAILPGAKPATEEDWGTEYLDLILAVKVVDS 319 (406)
T ss_pred HcccCCCcccccc-eeEEEeHHHH-HHHHHHHHHHHHHCCCEEecCHHHHHhcccccCCCcchhhhhhhCceeEEEEeCC
Confidence 9999998899999 9999999999 79999999999999998876654334554 4 5799999999999999999999
Q ss_pred HHHHHHHHHhcCCCceeEEEccCHHHHHHHHHccCcceEEEcCCcCCCCCCcccCcceeeccccccccccccchhcccEE
Q 005047 609 VRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTT 688 (716)
Q Consensus 609 ~deAi~~aN~~~~GL~a~i~t~d~~~a~~~~~~~~~G~v~vN~~~~~~~~~p~g~g~~sG~~~~~~~~~g~~gl~~ft~~ 688 (716)
+||||+++|+++|||++||||+|.++++++++++++|+|+||+++...+..|||++++||+|.+.++++|++|+++||+.
T Consensus 320 ~deAi~~aN~~~~GLsa~ift~d~~~a~~~~~~~~~G~v~iN~~~~~~~~~pfg~~~~sG~~~~~g~~~g~~~l~~~~~~ 399 (406)
T cd07079 320 LDEAIAHINRYGSGHTEAIVTENYETAERFLREVDSAAVYVNASTRFTDGGEFGLGAEIGISTQKLHARGPMGLEELTTY 399 (406)
T ss_pred HHHHHHHHHHhCCccccEeeeCCHHHHHHHHHhCCeeEEEEeCCCcccCCCccccceeeeeecCCCcCCCCcChHHhcEE
Confidence 99999999999999999999999999999999999999999998766667899999999997656678899999999999
Q ss_pred EEEEEc
Q 005047 689 RWILRG 694 (716)
Q Consensus 689 k~v~~~ 694 (716)
|+++++
T Consensus 400 k~i~~~ 405 (406)
T cd07079 400 KYIVRG 405 (406)
T ss_pred EEEEeC
Confidence 999875
No 5
>KOG2450 consensus Aldehyde dehydrogenase [Energy production and conversion]
Probab=100.00 E-value=2.3e-83 Score=681.21 Aligned_cols=400 Identities=17% Similarity=0.209 Sum_probs=354.7
Q ss_pred HHHhcCCcceeEEecCCccccchhhHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Q 005047 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSR--RLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQ 345 (716)
Q Consensus 268 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~ 345 (716)
.+|.+|+.++++..++ .+||++|+++||+||+ .|++++..+|.++|+++|+++++++++|+...+.|-++.
T Consensus 41 ~nP~tg~~i~~v~~~~------~~dVd~aV~aAr~Af~~~~W~~~~~~~R~~~L~~~Adlie~~~~~lA~~E~~d~GKp- 113 (501)
T KOG2450|consen 41 VNPATGEVIAKVAEAT------EEDVDEAVKAARSAFKLVDWAKRDAAERGRLLRKLADLIEQDADVLAALEVLDNGKP- 113 (501)
T ss_pred ecCCCCCeEEEecccc------HHHHHHHHHHHHHhcCcCccccCCHHHHHHHHHHHHHHHHhhhHHHhhhcccccCCc-
Confidence 4567888899998888 8999999999999999 799999999999999999999999999999877665432
Q ss_pred HhchhHHHHHHhhcCHHHHHHHHHHHHHHhcccccc-cccccccccCCCeEEEEeecceeEEEEEcCC-Cch-hHHHHHH
Q 005047 346 EAGYAKSLVSRLALKPGKISSLAKSIRILADMEEPI-GQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIAS 422 (716)
Q Consensus 346 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~-~P~-~~~~~~~ 422 (716)
+.+++ ..++..+++.+++++++++.. +...+. ..+...|+.++|+|||+.|+|| ||+ +..||++
T Consensus 114 ---~~~a~-------~~Dl~~~~~~~ry~ag~ad~~~~~~~~~---~~~~~~yt~~eP~GV~G~I~pWN~Pllm~awKla 180 (501)
T KOG2450|consen 114 ---YPEAL-------VSDLPPAIDCFRYYAGWADKIHGSTIPT---DGEFFAYTRREPIGVCGQIIPWNFPLLMQAWKLA 180 (501)
T ss_pred ---chhhh-------hcCchhhhhHHHhhccchhhcccccCCC---CCceEEEecCCcceeeeEeccCchHHHHHHHhhh
Confidence 22332 147888999999999998654 444331 3456789999999999999999 596 5689999
Q ss_pred HHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CchHHHhhcCCCCccEEEeecCHHHHHHHHHh
Q 005047 423 LAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKES 500 (716)
Q Consensus 423 ~ALaaGNtvv~Kps~~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~ 500 (716)
|||++|||||+||||+||+|++.+++++.+ + ||+||+|+|+| +.++|+.|.+||+|++|+||||+.+|+.|+++
T Consensus 181 PALa~GNtvV~Kpae~tplsal~~~~l~~e----aG~P~GVvNii~G~G~~aG~al~sH~dv~kiaFTGSt~~G~~I~~a 256 (501)
T KOG2450|consen 181 PALAAGNTVVLKPAEQTPLTALYLASLCKE----AGFPPGVVNIVPGSGTTAGAALASHPDVDKVAFTGSTPVGKEIMEA 256 (501)
T ss_pred hHHhhCcEEEecCCCCCCchHHHHHHHhHH----hcCCcceEEEccCCCchHHHHHhhCCCCceEEecCCCcchhHHhhh
Confidence 999999999999999999999999999997 8 99999999997 88899999999999999999999999999998
Q ss_pred cC----CCEEEecCCcceEEEcCCCCHHHHHHHHHHhcCCCCC-ccccccceEEEeCccCChhhHHHHHHHHHh-cCC--
Q 005047 501 TK----IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMVETLLVHKDLACNGALNELVVELQH-EGV-- 572 (716)
Q Consensus 501 a~----~~~~lElGGk~p~iV~~dADl~~Aa~~iv~~~f~n~g-~C~a~~~rv~V~~~i~dd~f~~~l~~~~~~-~~~-- 572 (716)
++ ||++||||||+|.||++|||+|.|++.++.+.|+|.| .|++. +|+|||++|| |+|++++++++++ +.+
T Consensus 257 aa~~n~K~vtLElGGKsp~Ivf~Dadld~av~~~~~~iF~nqGq~C~a~-sR~~Vqe~iy-defv~~~v~~a~~~~kvGd 334 (501)
T KOG2450|consen 257 AAESNLKPVTLELGGKSPIIVFDDADLDLAVENAAFGIFFNQGQCCTAG-SRVFVQESIY-DEFVEKFVAAAKKKLKVGD 334 (501)
T ss_pred hhhcCCceeccccCCCCcceEecccchHHHHHHHHHHhhcccccccccC-ceeEEechHH-HHHHHHHHHHHhcccccCC
Confidence 73 9999999999999999999999999999999999987 99999 9999999999 7999999999965 422
Q ss_pred --------------------------------EE-ecCccc--cccc--c-C-----CCCccccccccCceEEEEEeCCH
Q 005047 573 --------------------------------GL-FGGPRA--SKLL--Q-I-----PETRLFHHEYNSMVCTVEIVDDV 609 (716)
Q Consensus 573 --------------------------------~~-~g~~~~--~~~~--p-v-----~~~~~~~eE~FGPVl~v~~~~~~ 609 (716)
++ +||.+. .+|| | | ++|+|++||+||||++|++|++.
T Consensus 335 P~~~~~~qG~~i~~~q~ekI~~yi~~~k~eGa~l~~gG~~~g~~Gyfi~Ptv~~~v~~~m~i~~EEIFGPVv~v~~F~t~ 414 (501)
T KOG2450|consen 335 PFDEGTEQGPQISKTQYEKILGYIESGKKEGATLLCGGVRLGDKGYFIKPTVFTNVTDDMRIAKEEIFGPVVVVLKFKTE 414 (501)
T ss_pred CCCcccccccccCHHHHHHHHHHHHHHHhcCCEEEecCcccCCCceEECCeeccCCChhhhhhHhhccCceEEEEecCcH
Confidence 22 244332 2444 6 2 46999999999999999999999
Q ss_pred HHHHHHHHhcCCCceeEEEccCHHHHHHHHHccCcceEEEcCCcCCCCCCcccCcceeeccccccccccccchhcccEEE
Q 005047 610 RAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTR 689 (716)
Q Consensus 610 deAi~~aN~~~~GL~a~i~t~d~~~a~~~~~~~~~G~v~vN~~~~~~~~~p~g~g~~sG~~~~~~~~~g~~gl~~ft~~k 689 (716)
||+|+++|++.|||+++|||+|.++++++++++++|+||||+........||||.++||+| ++.|.+++++||+.|
T Consensus 415 eE~i~~AN~t~yGLAa~V~t~dl~~a~~va~~l~aGtVwiN~y~~~~~~~PfgG~K~SG~G----RE~g~~~l~~ytevK 490 (501)
T KOG2450|consen 415 EEVIERANNTTYGLAAGVFTKDLDKAHRVANALQAGTVWINCYNVFDAQVPFGGFKMSGIG----RELGEYGLEAYTEVK 490 (501)
T ss_pred HHHHHHhcCCcccceeeEeccChHHHHHHHHHhcCceEEEeccccccccCCccccccccCC----ccccHHHHhhcceee
Confidence 9999999999999999999999999999999999999999999888889999999999987 467999999999999
Q ss_pred EEEEcCce
Q 005047 690 WILRGNGH 697 (716)
Q Consensus 690 ~v~~~~~~ 697 (716)
+|+++.++
T Consensus 491 tv~v~~~~ 498 (501)
T KOG2450|consen 491 TVTVKLPQ 498 (501)
T ss_pred EEEEeCCC
Confidence 99987653
No 6
>KOG2451 consensus Aldehyde dehydrogenase [Energy production and conversion]
Probab=100.00 E-value=1e-82 Score=645.20 Aligned_cols=399 Identities=16% Similarity=0.183 Sum_probs=352.5
Q ss_pred HHHHhcCCcceeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Q 005047 267 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 346 (716)
Q Consensus 267 l~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~ 346 (716)
+.+|.+|+.+|.+...+ -++.++||.+|.+||.+|++++..+|.++|+++.++|.+|++||+++++.|.+++
T Consensus 43 V~nPa~geii~~V~~~~------V~e~~kAI~aA~EaF~s~~~~takeRs~lLrkwy~Li~en~ddLa~iiTlE~GKp-- 114 (503)
T KOG2451|consen 43 VDNPANGEIIGKVADMT------VEEAEKAIDAAYEAFKSYRNLTAKERSALLRKWYELIMENKDDLATIITLENGKP-- 114 (503)
T ss_pred ccCCCccchhhcccCCc------HHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhchHHHHHHHhhhcCCc--
Confidence 36789999999998888 7899999999999999999999999999999999999999999999998765443
Q ss_pred hchhHHHHHHhhcCHHHHHHHHHHHHHHhcccc-cccccccccccCCCeEEEEeecceeEEEEEcCC-Cch-hHHHHHHH
Q 005047 347 AGYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 423 (716)
Q Consensus 347 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~-~P~-~~~~~~~~ 423 (716)
+.++ ..|+.+.+..++||++.++ ..|+..++. .++.+..+.++|+||+++|+|| ||. +..+|.++
T Consensus 115 --L~eA--------~gEv~y~a~f~eWyAeEA~RvyGdii~s~--~~~rr~i~ikQPvGV~alItPWNFP~AMItRK~gA 182 (503)
T KOG2451|consen 115 --LGEA--------KGEVAYSAAFFEWYAEEARRVYGDIIPSL--NPNRRLIVIKQPVGVVALITPWNFPAAMITRKAGA 182 (503)
T ss_pred --hhhc--------cceeehhHHHHHHHHHHhhhhhccccCCC--CCCceEEEEeccceeEEEecCcCChHHHHHhHHHH
Confidence 2232 4578888888888887654 568776542 3456778899999999999999 785 66799999
Q ss_pred HHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC----CchHHHhhcCCCCccEEEeecCHHHHHHHH
Q 005047 424 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS----REEIPDLLKLDDVIDLVIPRGSNKLVSQIK 498 (716)
Q Consensus 424 ALaaGNtvv~Kps~~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~----~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~ 498 (716)
||++|||||+|||++||+|++.++++..+ | +|+|++|+|+. ..+.|..|..+|+|++|+|||||++||.+|
T Consensus 183 ALAaGCTvVvkPs~~TPlsaLala~lA~~----AGiP~Gv~NVit~~~~~a~eig~~lctsp~VrkisFTGST~VGKiL~ 258 (503)
T KOG2451|consen 183 ALAAGCTVVVKPSEDTPLSALALAKLAEE----AGIPAGVLNVITADASNAAEIGKELCTSPDVRKISFTGSTNVGKILM 258 (503)
T ss_pred HHhcCceEEEccCCCCchHHHHHHHHHHH----cCCCCcceEEEecCCCChHHHHHHhhcCCceeeEEeeccchHHHHHH
Confidence 99999999999999999999999999886 8 99999999982 457899999999999999999999999999
Q ss_pred HhcC---CCEEEecCCcceEEEcCCCCHHHHHHHHHHhcCCCCC-ccccccceEEEeCccCChhhHHHHHHHHHhcCC--
Q 005047 499 ESTK---IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMVETLLVHKDLACNGALNELVVELQHEGV-- 572 (716)
Q Consensus 499 ~~a~---~~~~lElGGk~p~iV~~dADl~~Aa~~iv~~~f~n~g-~C~a~~~rv~V~~~i~dd~f~~~l~~~~~~~~~-- 572 (716)
+++. |++.||||||.|+||++|||||+|++..+..+|.|+| +|.++ +|+|||++|| |+|+.+|.++++++.+
T Consensus 259 ~qsastvKkvslELGGNAPfIVFddadld~Av~g~mA~KFr~~GQtCVca-NR~yVh~~iy-D~Fv~~l~e~vkkl~vGd 336 (503)
T KOG2451|consen 259 AQSASTVKKVSLELGGNAPFIVFDDADLDQAVEGAMACKFRNSGQTCVCA-NRVYVHDSIY-DKFVSKLAEAVKKLKVGD 336 (503)
T ss_pred HhhhhhhhheehhhcCCCceEEecCcCHHHHHHHHHHhhhccCCceeEec-ceeEEehhhH-HHHHHHHHHHHHheeccC
Confidence 8873 9999999999999999999999999999999999987 99999 9999999999 7999999999998732
Q ss_pred --------------------------------EE-ecCcccc----ccc-c-C-----CCCccccccccCceEEEEEeCC
Q 005047 573 --------------------------------GL-FGGPRAS----KLL-Q-I-----PETRLFHHEYNSMVCTVEIVDD 608 (716)
Q Consensus 573 --------------------------------~~-~g~~~~~----~~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~ 608 (716)
.+ +||.+.. .|| | | ++|-+.+||+|||+.+|++|+|
T Consensus 337 G~~~~tt~GpLIne~av~Kve~~v~DAvsKga~ii~GGk~~~~lg~~fyePTvl~~V~~~m~~s~eEtFGPla~v~kFdt 416 (503)
T KOG2451|consen 337 GLDPGTTQGPLINEKAVEKVEKHVEDAVSKGAKIILGGKERSELGPTFYEPTVLSNVTQNMLVSSEETFGPLASVFKFDT 416 (503)
T ss_pred CCCCCCccCCccCHHHHHHHHHHHHHHHhcCCeEEeCCeEccccCCccccceEeecCCccceeeccccccccceeeeeCC
Confidence 11 2443211 133 6 2 3588999999999999999999
Q ss_pred HHHHHHHHHhcCCCceeEEEccCHHHHHHHHHccCcceEEEcCCcCCCCCCcccCcceeeccccccccccccchhcccEE
Q 005047 609 VRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTT 688 (716)
Q Consensus 609 ~deAi~~aN~~~~GL~a~i~t~d~~~a~~~~~~~~~G~v~vN~~~~~~~~~p~g~g~~sG~~~~~~~~~g~~gl~~ft~~ 688 (716)
+||+|+++||++.||++|+||+|..+..|++++|++|+|.+|.........||||.++||+| ++++.+|+++|+..
T Consensus 417 eeEvi~~ANdt~vGLAgYvfs~~~s~~~rVae~LEvGmVGvNeglis~~~~pFGGVKeSG~G----REgskyGidey~~i 492 (503)
T KOG2451|consen 417 EEEVIEWANDTRVGLAGYVFSNNLSRLFRVAEALEVGMVGVNEGLISDAEAPFGGVKESGFG----REGSKYGIDEYLVI 492 (503)
T ss_pred HHHHHHHhccCccceeeEEeccCHHHHHHHHHHHhcceeecccceecccccCcCCccccccC----ccccccchhhhhhh
Confidence 99999999999999999999999999999999999999999998888888999999999997 46789999999999
Q ss_pred EEEEEcC
Q 005047 689 RWILRGN 695 (716)
Q Consensus 689 k~v~~~~ 695 (716)
|+++++.
T Consensus 493 k~icig~ 499 (503)
T KOG2451|consen 493 KYICIGT 499 (503)
T ss_pred heeeecC
Confidence 9998754
No 7
>COG1012 PutA NAD-dependent aldehyde dehydrogenases [Energy production and conversion]
Probab=100.00 E-value=1.7e-79 Score=682.89 Aligned_cols=397 Identities=22% Similarity=0.228 Sum_probs=342.5
Q ss_pred HHHhcCCcceeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHh
Q 005047 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 347 (716)
Q Consensus 268 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~ 347 (716)
.+|.+|+.++++..++ .+|+++|+++|+.||+.|+++++.+|.++|++++++|++|+++|+++++.|.++.
T Consensus 19 ~nP~tg~~i~~~~~a~------~~dv~~Av~aA~~a~~~W~~~~~~eR~~iL~~~a~~l~~~~~ela~~~~~e~Gk~--- 89 (472)
T COG1012 19 INPATGEVIATVPAAT------AEDVDAAVAAARAAFEAWSRLSAEERAAILRRIADLLEARAEELAALITLETGKP--- 89 (472)
T ss_pred eCCCCCCEEeeecCCC------HHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCC---
Confidence 5678999999998888 7899999999999999999999999999999999999999999999988776443
Q ss_pred chhHHHHHHhhcCHHHHHHHHHHHHHHhcccc-cccccccccccCCCeEEEEeecceeEEEEEcCC-Cch-hHHHHHHHH
Q 005047 348 GYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 424 (716)
Q Consensus 348 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~-~P~-~~~~~~~~A 424 (716)
+.++ ..++..+++.++++++..+ ..+...+. ..+...+++++|+|||++|+|| ||. +.+|+++||
T Consensus 90 -i~ea--------~~ei~~~~~~~~~~a~~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~k~apA 157 (472)
T COG1012 90 -ISEA--------RGEIARAADFIRYYAEEARRLEGETIPT---DKGSKALVRREPLGVVGAITPWNFPLALAAWKLAPA 157 (472)
T ss_pred -HHHH--------HHHHHHHHHHHHHHHHHHHHhcCCccCC---CCCcceEEEeecceEEEEECCCCCHHHHHHhhHHHH
Confidence 1232 2347777778887776554 23332221 1145678999999999999998 796 678999999
Q ss_pred HHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CchHHHhhcCCCCccEEEeecCHHHHHHHHHhc-
Q 005047 425 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST- 501 (716)
Q Consensus 425 LaaGNtvv~Kps~~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a- 501 (716)
|++||+||+|||+.||+|+..+++++.+ + +|+|++|+|+| +.++++.|..||+|++|+||||+++|+.|++.+
T Consensus 158 LaaGntVV~KPse~tp~sa~~l~~~~~~----aglP~Gv~nvv~g~~~~~g~~l~~~p~v~~i~FTGSt~~G~~i~~~Aa 233 (472)
T COG1012 158 LAAGNTVVLKPSEQTPLSALALAELAAE----AGLPAGVLNVVTGGGAEVGDALVAHPDVDAISFTGSTAVGRAIAAAAA 233 (472)
T ss_pred HHcCCEEEEECcccCcHHHHHHHHHHHH----hCCCCCeEEEEeCCCchHHHHHhcCCCCCEEEEECChHHHHHHHHHHh
Confidence 9999999999999999999999999986 6 99999999996 566889999999999999999999999999987
Q ss_pred --CCCEEEecCCcceEEEcCCCCHHHHHHHHHHhcCCCCC-ccccccceEEEeCccCChhhHHHHHHHHHh-cCC-----
Q 005047 502 --KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMVETLLVHKDLACNGALNELVVELQH-EGV----- 572 (716)
Q Consensus 502 --~~~~~lElGGk~p~iV~~dADl~~Aa~~iv~~~f~n~g-~C~a~~~rv~V~~~i~dd~f~~~l~~~~~~-~~~----- 572 (716)
.||++||||||||+||++|||+|.|++.+++|+|.|+| +|+|. +|+|||+++| |+|+++|.++ ++ +.+
T Consensus 234 ~~~k~~~lELGGk~p~IV~~dAdl~~Av~~~~~g~f~n~GQ~C~a~-~R~~V~~~v~-d~f~~~l~~~-~~~l~~Gd~~d 310 (472)
T COG1012 234 ANLKPVTLELGGKSPAIVLEDADLDAAVDAAVFGAFFNAGQRCTAA-SRLIVHESVY-DEFVERLVAR-AASLKVGDPLD 310 (472)
T ss_pred hcCCcEEEECCCCCCeEECCCCCHHHHHHHHHHHHHhCCCCCccCC-eEEEEehhhH-HHHHHHHHHH-HhcCCCCCCCC
Confidence 39999999999999999999999999999999999987 99999 9999999999 7999999999 76 111
Q ss_pred -----------------------------EE-ecCccccccc--c-C-----CCCccccccccCceEEEEEeCCHHHHHH
Q 005047 573 -----------------------------GL-FGGPRASKLL--Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAID 614 (716)
Q Consensus 573 -----------------------------~~-~g~~~~~~~~--p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi~ 614 (716)
.+ .|+.+..++| | | ++|++++||+||||++|++|+|+||||+
T Consensus 311 ~~t~~Gpli~~~~~~~v~~~i~~a~~~G~~~~~Gg~~~~g~~~~PTv~~~v~~~~~i~~eEiFGPVl~v~~~~~~dEAi~ 390 (472)
T COG1012 311 PSTDLGPLISEEQLDRVEGYIEDAVAEGARLLAGGKRPGGYFVEPTILEGVTPDMRIAREEIFGPVLPVIRFKDEEEAIE 390 (472)
T ss_pred CCCccCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCcCCCCeEECCEEEecCCCCChhhhccccCCceEEEEeCCHHHHHH
Confidence 11 1232222333 5 2 4799999999999999999999999999
Q ss_pred HHHhcCCCceeEEEccCHHHHHHHHHccCcceEEEcCCcC--CCCCCcccCcceeeccccccccccccchhcccEEEEEE
Q 005047 615 HIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTR--FCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 692 (716)
Q Consensus 615 ~aN~~~~GL~a~i~t~d~~~a~~~~~~~~~G~v~vN~~~~--~~~~~p~g~g~~sG~~~~~~~~~g~~gl~~ft~~k~v~ 692 (716)
++|+++|||+++|||+|..++.++++++++|+||||+... .....||||.+.||+| +++|.+++++|++.|+|.
T Consensus 391 lAN~t~yGL~a~v~t~d~~~~~~~~~~l~aG~v~iN~~~~~~~~~~~PFGG~k~SG~G----~~~g~~~~~~~~~~k~v~ 466 (472)
T COG1012 391 LANDTEYGLAAAIFTRDLARAFRVARRLEAGMVGINDYTGGADIAYLPFGGVKQSGLG----REGGKYGLEEFTEVKTVT 466 (472)
T ss_pred HHhCCCCCceEEEEcCCHHHHHHHHhcCCeeEEEECCCCCCCCCCCCCCCCcccccCC----ccchHHHHHHHhcceEEE
Confidence 9999999999999999999999999999999999998753 3466899999999986 356899999999999998
Q ss_pred EcCc
Q 005047 693 RGNG 696 (716)
Q Consensus 693 ~~~~ 696 (716)
....
T Consensus 467 ~~~~ 470 (472)
T COG1012 467 IKLG 470 (472)
T ss_pred EecC
Confidence 7643
No 8
>TIGR00407 proA gamma-glutamyl phosphate reductase. The prosite motif begins at residue 332 of the seed alignment although not all of the members of the family exactly obey the motif.
Probab=100.00 E-value=2.9e-78 Score=660.14 Aligned_cols=388 Identities=44% Similarity=0.733 Sum_probs=346.0
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhchhHHHHHHhhcCHHHHHHHHHHHHHHhcccc
Q 005047 300 ARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRILADMEE 379 (716)
Q Consensus 300 A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (716)
|++||+.|+++|.++|.++|++++++|++|+++|++++++|+..++|+|++..+.+++..+..++..+++.++++++.++
T Consensus 1 a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~a~~~E~Gk~~~~~~~l~~a~~ev~~~~~~~~~~a~~a~ 80 (398)
T TIGR00407 1 AKQAANILAQLSTAEKNDALSKIADGLEAQAPAILAANAKDIAVAKENGLADALLDRLLLTEGRLKGIADGVKDVIELAD 80 (398)
T ss_pred ChhHHHHHHhCCHHHHHHHHHHHHHHHHhChHHHHHHhHHHHHHHHHcCCCHHHHHHHcCCHHHHHHHHHHHHHHhcCCC
Confidence 57899999999999999999999999999999999998888888889998765555566677899999999999998776
Q ss_pred cccccccccccCCCeEEEEeecceeEEEEEcCCCchhHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-c
Q 005047 380 PIGQILKRTELADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-V 458 (716)
Q Consensus 380 ~~g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~~P~~~~~~~~~ALaaGNtvv~Kps~~tp~t~~~l~~l~~~al~~a-l 458 (716)
..|+..+......+...+++|+|+|||++|+||||++++++++|||++||+||+||||.||+|+.+|++++++++.++ +
T Consensus 81 ~~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~pw~p~~~~~~~~~ALaaGN~vVlKps~~tp~~~~~l~~~~~~al~eaGl 160 (398)
T TIGR00407 81 PVGKVIDGRELDSGLTLERVRVPLGVLGVIYEARPNVTVDIASLCLKTGNAVILRGGKEAVRSNKALVEVIQDALAQTGL 160 (398)
T ss_pred CCcccccceecCCCceEEEEEeCcEEEEEEeCCCchHHHHHHHHHHHhCCeEEECCChhhHHHHHHHHHHHHHHHHHcCC
Confidence 666544321112355678899999999999999888888999999999999999999999999999999998888889 9
Q ss_pred CcCceEEecC-C-chHHHhhcCCCCccEEEeecCHHHHHHHHHhcCCCEEEecCCcceEEEcCCCCHHHHHHHHHHhcCC
Q 005047 459 GEKLIGLVTS-R-EEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKID 536 (716)
Q Consensus 459 P~gvv~vv~~-~-~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a~~~~~lElGGk~p~iV~~dADl~~Aa~~iv~~~f~ 536 (716)
|+|+||+|++ + ++++++|..||+||+|+||||+.+|+.+++.+.+|+++|||||||+||++|||+|+|++.+++|+|.
T Consensus 161 P~gvv~~v~g~~~~~~~~~l~~~~~v~~v~fTGs~~vg~~~~~~~~~~~~~e~gGk~p~iV~~dADl~~Aa~~iv~~~~~ 240 (398)
T TIGR00407 161 PVGAVQLIETPSRELVSELLDLDEYIDLLIPRGGNGLVRLIKQTSTIPVLGHGDGICHIYLDESADLIKAIKVIVNAKTQ 240 (398)
T ss_pred ChhHEEEecCCCHHHHHHHHhCCCCeeEEEecCCHHHHHHHHHhCCCCEEEecCCcceEEEeCCCCHHHHHHHHHhhhcC
Confidence 9999999995 4 4588999999999999999999999999988789999999999999999999999999999999998
Q ss_pred CCCccccccceEEEeCccCChhhHHHHHHHHHhcCCEEecCccccccc----c-C--CCCccccccccCceEEEEEeCCH
Q 005047 537 YPAACNAMVETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLL----Q-I--PETRLFHHEYNSMVCTVEIVDDV 609 (716)
Q Consensus 537 n~g~C~a~~~rv~V~~~i~dd~f~~~l~~~~~~~~~~~~g~~~~~~~~----p-v--~~~~~~~eE~FGPVl~v~~~~~~ 609 (716)
|+|+|+|+ +|+|||++|| |+|+++|+++++++++.+........++ | + .++++++||+||||++|++|+|+
T Consensus 241 ~GQ~C~a~-~rv~V~~~v~-d~f~~~l~~~~~~~~~~~~~~~~i~~~v~~g~~tv~~~~~~i~~eE~FgPvl~v~~~~~~ 318 (398)
T TIGR00407 241 RPSTCNAI-ETLLVNKAIA-REFLPVLENQLLEKGVTIHADAYALKLLELGPATEAIVCKTDFDKEFLSLDLSVKIVESL 318 (398)
T ss_pred CCCccccc-ceEEEeHHHH-HHHHHHHHHHHHhcCCEEecCHHHHHHHhccCccccccccccccchhhCceeEEEEECCH
Confidence 76699999 9999999999 7999999999998876552211111122 2 2 35789999999999999999999
Q ss_pred HHHHHHHHhcCCCceeEEEccCHHHHHHHHHccCcceEEEcCCcCCCCCCcccCcceeeccccccccccccchhcccEEE
Q 005047 610 RAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTR 689 (716)
Q Consensus 610 deAi~~aN~~~~GL~a~i~t~d~~~a~~~~~~~~~G~v~vN~~~~~~~~~p~g~g~~sG~~~~~~~~~g~~gl~~ft~~k 689 (716)
||||+++|+++|||++||||+|.+++++|++++++|+|+||+++.+.+..|||.|.+.|+|+++.|.+|+.+++.||+.|
T Consensus 319 ~eAi~~aN~~~~GL~a~I~t~d~~~a~~~a~~i~~G~v~iN~~~~~~~~~pfG~~~~~~~~~~~~~~rg~~~~~~~~~~~ 398 (398)
T TIGR00407 319 EAAIQHINQYGTQHSDAILTENKANAEQFQNGVDSAAVYHNASTRFTDGFRFGFGAEVGISTQKLHARGPMGLEALTSYK 398 (398)
T ss_pred HHHHHHHHHhCCCCceEEEeCCHHHHHHHHHhCCeeEEEEeCCCCcCCCcccccceeeEEecCCCcCCCCcCHHHhcCCC
Confidence 99999999999999999999999999999999999999999998888889999999999999999999999999999875
No 9
>PRK11241 gabD succinate-semialdehyde dehydrogenase I; Provisional
Probab=100.00 E-value=4.7e-78 Score=676.77 Aligned_cols=397 Identities=17% Similarity=0.164 Sum_probs=342.8
Q ss_pred HHHhcCCcceeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHh
Q 005047 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 347 (716)
Q Consensus 268 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~ 347 (716)
.+|.+|+.++++..++ .+|+++|+++|++||+.|+++|.++|.++|++++++|++++++|++++.+|.|++..
T Consensus 31 ~nP~tg~~v~~~~~~~------~~~v~~av~~A~~a~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~- 103 (482)
T PRK11241 31 TNPANGDKLGSVPKMG------ADETRAAIDAANRALPAWRALTAKERANILRRWFNLMMEHQDDLARLMTLEQGKPLA- 103 (482)
T ss_pred ECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHH-
Confidence 5678999999998888 899999999999999999999999999999999999999999999988876654321
Q ss_pred chhHHHHHHhhcCHHHHHHHHHHHHHHhccccc-ccccccccccCCCeEEEEeecceeEEEEEcCC-Cch-hHHHHHHHH
Q 005047 348 GYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 424 (716)
Q Consensus 348 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~-~P~-~~~~~~~~A 424 (716)
++ ..|+..+++.+++++...+. .|...+.. ..+...+++|+|+|||++|+|| ||. +.+++++||
T Consensus 104 ---~a--------~~ev~~~~~~~~~~a~~~~~~~g~~~~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~A 170 (482)
T PRK11241 104 ---EA--------KGEISYAASFIEWFAEEGKRIYGDTIPGH--QADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPA 170 (482)
T ss_pred ---HH--------HHHHHHHHHHHHHHHHHHHHhcCcccccC--CCCceEEEEEeeceEEEEECCCcChHHHHHHHHHHH
Confidence 22 24677778888877654432 23322211 1234467889999999999998 696 578999999
Q ss_pred HHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CchHHHhhcCCCCccEEEeecCHHHHHHHHHhc-
Q 005047 425 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST- 501 (716)
Q Consensus 425 LaaGNtvv~Kps~~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a- 501 (716)
|++||+||+|||+.||+++.++++++.+ + +|+|++|+|+| +.++++.|..||+||+|+||||+++|+.|++.+
T Consensus 171 LaaGN~VVlKPs~~tp~~~~~l~~~~~~----aglP~gvv~vv~g~~~~~~~~l~~~~~v~~v~FTGS~~~G~~i~~~aa 246 (482)
T PRK11241 171 LAAGCTMVLKPASQTPFSALALAELAIR----AGIPAGVFNVVTGSAGAVGGELTSNPLVRKLSFTGSTEIGRQLMEQCA 246 (482)
T ss_pred HHhCCEEEEECCCCChHHHHHHHHHHHH----cCCCcccEEEEecCCchhHHHHhcCCCCCEEEEECcHHHHHHHHHHHH
Confidence 9999999999999999999999999986 7 99999999996 567888888999999999999999999999887
Q ss_pred --CCCEEEecCCcceEEEcCCCCHHHHHHHHHHhcCCCCC-ccccccceEEEeCccCChhhHHHHHHHHHhcCC------
Q 005047 502 --KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMVETLLVHKDLACNGALNELVVELQHEGV------ 572 (716)
Q Consensus 502 --~~~~~lElGGk~p~iV~~dADl~~Aa~~iv~~~f~n~g-~C~a~~~rv~V~~~i~dd~f~~~l~~~~~~~~~------ 572 (716)
.+|++||||||||+||++|||+|.|++.+++|+|.|+| .|+|+ +|+|||++|| |+|+++|+++++++.+
T Consensus 247 ~~l~~~~lElGGknp~IV~~dADld~aa~~i~~~~f~~aGQ~C~a~-~ri~V~~~i~-d~f~~~l~~~~~~l~~G~p~~~ 324 (482)
T PRK11241 247 KDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCA-NRLYVQDGVY-DRFAEKLQQAVSKLHIGDGLEK 324 (482)
T ss_pred hcCCcEEEECCCCCeEEEcCCCCHHHHHHHHHHHHHhcCCCCCccC-eEEEEeHHHH-HHHHHHHHHHHhhCCCCCCCCC
Confidence 38999999999999999999999999999999999987 99999 9999999999 7999999999987631
Q ss_pred ----------------------------EE-ecCccc--cccc--c-C-----CCCccccccccCceEEEEEeCCHHHHH
Q 005047 573 ----------------------------GL-FGGPRA--SKLL--Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAI 613 (716)
Q Consensus 573 ----------------------------~~-~g~~~~--~~~~--p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi 613 (716)
++ .|+... .++| | | ++|++++||+||||++|++|+|+||||
T Consensus 325 ~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~GG~~~~~~g~f~~Ptvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eai 404 (482)
T PRK11241 325 GVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHELGGNFFQPTILVDVPANAKVAKEETFGPLAPLFRFKDEADVI 404 (482)
T ss_pred CCCcCCCCCHHHHHHHHHHHHHHHhCCCEEEecCCCCCCCCeEEeeEEEECCCCCChhhhCcCcCCEEEEEEeCCHHHHH
Confidence 22 244321 2333 6 2 468999999999999999999999999
Q ss_pred HHHHhcCCCceeEEEccCHHHHHHHHHccCcceEEEcCCcCCCCCCcccCcceeeccccccccccccchhcccEEEEEEE
Q 005047 614 DHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILR 693 (716)
Q Consensus 614 ~~aN~~~~GL~a~i~t~d~~~a~~~~~~~~~G~v~vN~~~~~~~~~p~g~g~~sG~~~~~~~~~g~~gl~~ft~~k~v~~ 693 (716)
+++|+++|||++||||+|.++++++++++++|+||||+.....+..||||.|.||+| +++|++|+++||+.|+|++
T Consensus 405 ~~aN~s~~GL~a~Vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G----~~~g~~g~~~ft~~k~v~~ 480 (482)
T PRK11241 405 AQANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLG----REGSKYGIEDYLEIKYMCI 480 (482)
T ss_pred HHhhCCCCCceEEEEcCCHHHHHHHHHHcCccEEEECCCCCCCCCCCcCCccccccC----cccHHHHHHHhhcceEEEE
Confidence 999999999999999999999999999999999999987665567899999999986 3569999999999999876
Q ss_pred c
Q 005047 694 G 694 (716)
Q Consensus 694 ~ 694 (716)
.
T Consensus 481 ~ 481 (482)
T PRK11241 481 G 481 (482)
T ss_pred e
Confidence 3
No 10
>PLN02419 methylmalonate-semialdehyde dehydrogenase [acylating]
Probab=100.00 E-value=1e-77 Score=679.21 Aligned_cols=399 Identities=17% Similarity=0.196 Sum_probs=340.3
Q ss_pred HHHhcCCcceeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHh
Q 005047 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 347 (716)
Q Consensus 268 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~ 347 (716)
.+|.+|+.++++..++ .+|+++|+++|++||+.|+++|.++|.++|++++++|++|+++|++++.+|.|+...
T Consensus 134 ~nP~tg~~i~~v~~a~------~~dv~~Av~aA~~A~~~W~~~~~~eR~~iL~k~a~~L~~~~~ela~~~~~E~GKp~~- 206 (604)
T PLN02419 134 INPATQEVVSKVPLTT------NEEFKAAVSAAKQAFPLWRNTPITTRQRVMLKFQELIRKNMDKLAMNITTEQGKTLK- 206 (604)
T ss_pred ECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHH-
Confidence 5678999999999888 899999999999999999999999999999999999999999999998877654421
Q ss_pred chhHHHHHHhhcCHHHHHHHHHHHHHHhcccc-cccccccccccCCCeEEEEeecceeEEEEEcCC-Cch-hHHHHHHHH
Q 005047 348 GYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 424 (716)
Q Consensus 348 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~-~P~-~~~~~~~~A 424 (716)
++ ..|+..+++.++++++..+ ..++..+.. ..+...+++|+|+|||++|+|| ||. +.+++++||
T Consensus 207 ---ea--------~~EV~~~i~~~~~~a~~a~~~~g~~~~~~--~~~~~~~~~reP~GVV~~I~PwNfPl~l~~~~iapA 273 (604)
T PLN02419 207 ---DS--------HGDIFRGLEVVEHACGMATLQMGEYLPNV--SNGVDTYSIREPLGVCAGICPFNFPAMIPLWMFPVA 273 (604)
T ss_pred ---HH--------HHHHHHHHHHHHHHHHHHHHhhCCccccc--CCCccceEEecCccEEEEECCCccHHHHHHHHHHHH
Confidence 22 2366677777777665432 223322211 1233467889999999999998 696 578999999
Q ss_pred HHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecCCchHHHhhcCCCCccEEEeecCHHHHHHHHHhc--
Q 005047 425 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST-- 501 (716)
Q Consensus 425 LaaGNtvv~Kps~~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a-- 501 (716)
|++||+||+|||+.||+++.+|++++.+ + ||+|+||+|+|..++++.|..||+||+|+||||+++|+.|+++|
T Consensus 274 LaAGNtVVlKPSe~tp~ta~~l~~l~~e----AGlP~GvvnvV~G~~~~~~~L~~~~~Vd~V~FTGSt~vG~~I~~~Aa~ 349 (604)
T PLN02419 274 VTCGNTFILKPSEKDPGASVILAELAME----AGLPDGVLNIVHGTNDTVNAICDDEDIRAVSFVGSNTAGMHIYARAAA 349 (604)
T ss_pred HHcCCEEEEeCCCCCcHHHHHHHHHHHH----hCcCcceEEEEeCChHHHHHHHhCCCCCEEEEeCChHHHHHHHHHHhc
Confidence 9999999999999999999999999986 7 99999999997545777788899999999999999999999877
Q ss_pred -CCCEEEecCCcceEEEcCCCCHHHHHHHHHHhcCCCCC-ccccccceEEEeCccCChhhHHHHHHHHHhcCC-------
Q 005047 502 -KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMVETLLVHKDLACNGALNELVVELQHEGV------- 572 (716)
Q Consensus 502 -~~~~~lElGGk~p~iV~~dADl~~Aa~~iv~~~f~n~g-~C~a~~~rv~V~~~i~dd~f~~~l~~~~~~~~~------- 572 (716)
.+|++||||||||+||++|||||.|++.+++|+|.|+| +|+|+ +|||||++ | |+|+++|+++++++.+
T Consensus 350 ~lk~v~LELGGknp~IV~~DADld~Aa~~iv~g~f~naGQ~C~A~-~Rv~V~~~-~-d~f~e~l~~~~~~l~vG~p~d~~ 426 (604)
T PLN02419 350 KGKRIQSNMGAKNHGLVLPDANIDATLNALLAAGFGAAGQRCMAL-STVVFVGD-A-KSWEDKLVERAKALKVTCGSEPD 426 (604)
T ss_pred cCCcEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhhCCCCcCCC-CEEEEeCc-H-HHHHHHHHHHHHHhccCCCCCCC
Confidence 38999999999999999999999999999999999987 99999 99999999 9 7999999999887531
Q ss_pred ---------------------------EE-ecCccc------cc-cc-c-C-----CCCccccccccCceEEEEEeCCHH
Q 005047 573 ---------------------------GL-FGGPRA------SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVR 610 (716)
Q Consensus 573 ---------------------------~~-~g~~~~------~~-~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~d 610 (716)
++ .|+.+. .+ |+ | | ++|++++||+||||++|++|+|+|
T Consensus 427 t~~GPlis~~~~~~v~~~i~~A~~~GAkvl~GG~~~~~~~~~~G~f~~PTVL~~v~~d~~i~~eEiFGPVl~V~~~~~~d 506 (604)
T PLN02419 427 ADLGPVISKQAKERICRLIQSGVDDGAKLLLDGRDIVVPGYEKGNFIGPTILSGVTPDMECYKEEIFGPVLVCMQANSFD 506 (604)
T ss_pred CCccCCCCHHHHHHHHHHHHHHHhcCCEEEeCCccccCCCCCCCeEEeeEEEeCCCCCCHHHcCCCcCCEEEEEecCCHH
Confidence 22 244321 23 33 5 2 468999999999999999999999
Q ss_pred HHHHHHHhcCCCceeEEEccCHHHHHHHHHccCcceEEEcCCcCC-CCCCcccCcceeeccccccccccccchhcccEEE
Q 005047 611 AAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRF-CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTR 689 (716)
Q Consensus 611 eAi~~aN~~~~GL~a~i~t~d~~~a~~~~~~~~~G~v~vN~~~~~-~~~~p~g~g~~sG~~~~~~~~~g~~gl~~ft~~k 689 (716)
|||+++|+++|||++||||+|.++++++++++++|+||||+.... .+..||||.+.||+|. .+++|++|+++|++.|
T Consensus 507 EAI~laN~s~yGLaasVfT~d~~~a~~~a~~l~aG~V~IN~~~~~~~~~~PFGG~k~SG~G~--~~~~G~~gl~~ft~~K 584 (604)
T PLN02419 507 EAISIINKNKYGNGAAIFTSSGAAARKFQMDIEAGQIGINVPIPVPLPFFSFTGNKASFAGD--LNFYGKAGVDFFTQIK 584 (604)
T ss_pred HHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCeeeEEEcCCCCCCCCCCCcCCcCcCCCCC--CcccHHHHHHHhhCeE
Confidence 999999999999999999999999999999999999999987433 3678999999999862 1356999999999999
Q ss_pred EEEEcC
Q 005047 690 WILRGN 695 (716)
Q Consensus 690 ~v~~~~ 695 (716)
+|+++.
T Consensus 585 ~v~~~~ 590 (604)
T PLN02419 585 LVTQKQ 590 (604)
T ss_pred EEEEcc
Confidence 998764
No 11
>PLN02174 aldehyde dehydrogenase family 3 member H1
Probab=100.00 E-value=7.2e-77 Score=662.11 Aligned_cols=386 Identities=19% Similarity=0.207 Sum_probs=323.3
Q ss_pred hhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhchhHHHHHHhhcCHHHHHHHHH
Q 005047 290 QVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAK 369 (716)
Q Consensus 290 ~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 369 (716)
..|+++++++|++||++|+++|.++|.++|++++++|++|+|||++++++|+++.. .++...++.....+++++++
T Consensus 9 ~~~v~~av~~a~~af~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~l~~e~GKp~----~~a~~~Ev~~~~~~~~~~~~ 84 (484)
T PLN02174 9 AADASILVTELRRSFDDGVTRGYEWRVTQLKKLMIICDNHEPEIVAALRDDLGKPE----LESSVYEVSLLRNSIKLALK 84 (484)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH----HHHHHHHHHHHHHHHHHHHH
Confidence 67999999999999999999999999999999999999999999999998876543 23333344444556666666
Q ss_pred HHHHHhcccccccccccccccCCCeEEEEeecceeEEEEEcCC-Cch-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHH
Q 005047 370 SIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILH 447 (716)
Q Consensus 370 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~-~P~-~~~~~~~~ALaaGNtvv~Kps~~tp~t~~~l~ 447 (716)
.++.|.+... ...+. . ..+...+++|+|+|||++|+|| ||. +++++++|||+|||+||+||||.||+|+.+++
T Consensus 85 ~~~~~~~~~~---~~~~~-~-~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPse~tp~~~~~l~ 159 (484)
T PLN02174 85 QLKNWMAPEK---AKTSL-T-TFPASAEIVSEPLGVVLVISAWNYPFLLSIDPVIGAISAGNAVVLKPSELAPASSALLA 159 (484)
T ss_pred HHHHHhcccc---ccccc-c-cCCcceEEEEecceEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHH
Confidence 6665432111 11111 1 1123467899999999999999 696 67899999999999999999999999999999
Q ss_pred HHHHHhcccccCcCceEEecCCchHHHhhcCCCCccEEEeecCHHHHHHHHHhc---CCCEEEecCCcceEEEcCCCCHH
Q 005047 448 KVITSAIPDTVGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST---KIPVLGHADGICHVYVDKSANLD 524 (716)
Q Consensus 448 ~l~~~al~~alP~gvv~vv~~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a---~~~~~lElGGk~p~iV~~dADl~ 524 (716)
+++.+ ++|+|++|+|+|+.+.+..|.+ |+||+|+||||+++|+.|++.| .||++||||||||+||++|||||
T Consensus 160 ~l~~~----~lp~gvv~vv~G~~~~~~~l~~-~~vd~V~FTGS~~~G~~I~~~aa~~l~~v~LELGGk~p~iV~~dADl~ 234 (484)
T PLN02174 160 KLLEQ----YLDSSAVRVVEGAVTETTALLE-QKWDKIFYTGSSKIGRVIMAAAAKHLTPVVLELGGKSPVVVDSDTDLK 234 (484)
T ss_pred HHHHH----hCCCCEEEEEECChHHHHHHhc-ccCCEEEEECChHHHHHHHHHHHhcCCcEEEecCCCCeEEEcCCCCHH
Confidence 99985 5999999999964334444544 7899999999999999999887 48999999999999999999999
Q ss_pred HHHHHHHHhcC-CCCC-ccccccceEEEeCccCChhhHHHHHHHHHhcCC------------------------------
Q 005047 525 VAKNIVIDAKI-DYPA-ACNAMVETLLVHKDLACNGALNELVVELQHEGV------------------------------ 572 (716)
Q Consensus 525 ~Aa~~iv~~~f-~n~g-~C~a~~~rv~V~~~i~dd~f~~~l~~~~~~~~~------------------------------ 572 (716)
.|++.+++|+| .|+| +|+|+ +|+|||+++| |+|+++|+++++++..
T Consensus 235 ~Aa~~i~~g~f~~n~GQ~C~a~-~rv~V~~~i~-d~f~~~l~~~~~~~~~G~p~~~~~~Gpli~~~~~~~v~~~i~~a~~ 312 (484)
T PLN02174 235 VTVRRIIAGKWGCNNGQACISP-DYILTTKEYA-PKVIDAMKKELETFYGKNPMESKDMSRIVNSTHFDRLSKLLDEKEV 312 (484)
T ss_pred HHHHHHHHHHhhCCCCCCCCcC-cEEEEeHHHH-HHHHHHHHHHHHhhcCCCCcccCCcCCCCCHHHHHHHHHHHHHHHc
Confidence 99999999999 5876 99999 9999999999 7999999998876521
Q ss_pred --EE-ecCccc-cc-cc-c-C-----CCCccccccccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEccCHHHHHHHHH
Q 005047 573 --GL-FGGPRA-SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLC 640 (716)
Q Consensus 573 --~~-~g~~~~-~~-~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~i~t~d~~~a~~~~~ 640 (716)
++ .||... .+ ++ | | ++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++
T Consensus 313 ga~~~~GG~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~eai~~aN~~~~gLaa~vft~d~~~a~~~~~ 392 (484)
T PLN02174 313 SDKIVYGGEKDRENLKIAPTILLDVPLDSLIMSEEIFGPLLPILTLNNLEESFDVIRSRPKPLAAYLFTHNKKLKERFAA 392 (484)
T ss_pred CCEEEECCCcCCCCCEEEEEEEecCCCCChhhcCCcCCCeEEEecCCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHH
Confidence 12 244322 13 33 5 2 468999999999999999999999999999999999999999999999999999
Q ss_pred ccCcceEEEcCCcCCC--CCCcccCcceeeccccccccccccchhcccEEEEEEEcC
Q 005047 641 QVDSAAVFHNASTRFC--DGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGN 695 (716)
Q Consensus 641 ~~~~G~v~vN~~~~~~--~~~p~g~g~~sG~~~~~~~~~g~~gl~~ft~~k~v~~~~ 695 (716)
++++|+|+||++.... +..||||.+.||+| +++|.+|+++||+.|+|.++.
T Consensus 393 ~l~aG~v~IN~~~~~~~~~~~PfGG~k~SG~G----r~~G~~gl~~ft~~K~v~~~~ 445 (484)
T PLN02174 393 TVSAGGIVVNDIAVHLALHTLPFGGVGESGMG----AYHGKFSFDAFSHKKAVLYRS 445 (484)
T ss_pred cCCcceEEECCCcCCCCCCCCCCCCcCccccC----ccchHHHHHHhcceEEEEECC
Confidence 9999999999876543 56899999999986 357999999999999998763
No 12
>TIGR03374 ABALDH 1-pyrroline dehydrogenase. Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family.
Probab=100.00 E-value=2.4e-76 Score=662.53 Aligned_cols=398 Identities=14% Similarity=0.158 Sum_probs=339.9
Q ss_pred HHHHhcCCcceeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Q 005047 267 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 346 (716)
Q Consensus 267 l~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~ 346 (716)
+.+|.+|+.++++..++ .+|+++++++|++||+.|+++|.++|.++|++++++|++++++|++++++|+++...
T Consensus 20 v~~P~tg~~i~~~~~~~------~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ 93 (472)
T TIGR03374 20 VYNPATGEVILEIAEAS------AEQVDAAVRAADAAFAEWGQTTPKARAECLLKLADVIEENAQVFAELESRNCGKPLH 93 (472)
T ss_pred eECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHH
Confidence 35678899999999988 899999999999999999999999999999999999999999999998877654321
Q ss_pred hchhHHHHHHhhcCHHHHHHHHHHHHHHhccccc-ccccccccccCCCeEEEEeecceeEEEEEcCC-Cch-hHHHHHHH
Q 005047 347 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 423 (716)
Q Consensus 347 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~-~P~-~~~~~~~~ 423 (716)
++. ..++...++.+++++...+. .+...+.. ..+...++.|+|+|||++|+|| ||. +.+++++|
T Consensus 94 ----~~~-------~~ev~~~~~~~~~~a~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ 160 (472)
T TIGR03374 94 ----SVF-------NDEIPAIVDVFRFFAGAARCLSGLAAGEY--LEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAP 160 (472)
T ss_pred ----HHH-------HHHHHHHHHHHHHHHHHHHHhcCcccCcc--CCCceEEEEEecceEEEEECCCCchHHHHHHHHHH
Confidence 111 12555666666666543321 12211111 1234567889999999999998 695 57899999
Q ss_pred HHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccccCcCceEEecC-CchHHHhhcCCCCccEEEeecCHHHHHHHHHhcC
Q 005047 424 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDTVGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK 502 (716)
Q Consensus 424 ALaaGNtvv~Kps~~tp~t~~~l~~l~~~al~~alP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a~ 502 (716)
||++||+||+|||+.||+++.++++++.+ +||+|++|+|+| ++++++.|..||+||+|+||||+++|+.|++++.
T Consensus 161 ALaaGN~VV~KPs~~tp~~~~~l~~l~~~----~lP~gv~~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa 236 (472)
T TIGR03374 161 ALAAGNCVVLKPSEITPLTALKLAELAKD----IFPAGVVNILFGRGKTVGDPLTGHEKVRMVSLTGSIATGEHILSHTA 236 (472)
T ss_pred HHhcCCEEEecCCCCCCHHHHHHHHHHHH----hCCcCeEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHh
Confidence 99999999999999999999999999975 499999999996 6678888999999999999999999999998773
Q ss_pred ---CCEEEecCCcceEEEcCCCCHHHHHHHHHHhcCCCCC-ccccccceEEEeCccCChhhHHHHHHHHHhcCC------
Q 005047 503 ---IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMVETLLVHKDLACNGALNELVVELQHEGV------ 572 (716)
Q Consensus 503 ---~~~~lElGGk~p~iV~~dADl~~Aa~~iv~~~f~n~g-~C~a~~~rv~V~~~i~dd~f~~~l~~~~~~~~~------ 572 (716)
||++||||||||+||++|||+|.|++.+++++|.|+| +|+|+ +|+|||+++| |+|+++|+++++++.+
T Consensus 237 ~~~~~~~lElGGk~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~-~rv~V~~~i~-~~f~~~l~~~~~~l~~G~p~~~ 314 (472)
T TIGR03374 237 PSIKRTHMELGGKAPVIVFDDADIDAVVEGVRTFGFYNAGQDCTAA-CRIYAQRGIY-DTLVEKLGAAVATLKSGAPDDE 314 (472)
T ss_pred hcccceEEecCCCCeeEECCCCCHHHHHHHHHHHHHhhcCCccccC-CEEEEcHHHH-HHHHHHHHHHHhcCCCCCCCCC
Confidence 9999999999999999999999999999999999987 99999 9999999999 7999999999887521
Q ss_pred -----------------------------EEe-cCccc--ccc-c-c-C-----CCCccccccccCceEEEEEeCCHHHH
Q 005047 573 -----------------------------GLF-GGPRA--SKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAA 612 (716)
Q Consensus 573 -----------------------------~~~-g~~~~--~~~-~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deA 612 (716)
++. |+... .++ + | | ++|++++||+||||++|++|+|+|||
T Consensus 315 ~~~~Gpli~~~~~~~v~~~i~~a~~~G~a~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~ea 394 (472)
T TIGR03374 315 STELGPLSSLAHLERVMKAVEEAKALGHIKVITGGEKRKGNGYYFAPTLLAGAKQDDAIVQKEVFGPVVSITSFDDEEQV 394 (472)
T ss_pred CCcCCCCCCHHHHHHHHHHHHHHHHcCCeEEEeCCccCCCCCeEEeeEEEeCCCCCChhhhCCccCceEEEEEECCHHHH
Confidence 121 33221 133 3 5 2 46899999999999999999999999
Q ss_pred HHHHHhcCCCceeEEEccCHHHHHHHHHccCcceEEEcCCcCCCCCCcccCcceeeccccccccccccchhcccEEEEEE
Q 005047 613 IDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 692 (716)
Q Consensus 613 i~~aN~~~~GL~a~i~t~d~~~a~~~~~~~~~G~v~vN~~~~~~~~~p~g~g~~sG~~~~~~~~~g~~gl~~ft~~k~v~ 692 (716)
|+++|+++|||++||||+|.++++++++++++|+|+||+.....+.+||||.+.||+| +++|++|+++||+.|+++
T Consensus 395 i~~an~~~~gL~a~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G----~~~g~~~l~~~t~~k~i~ 470 (472)
T TIGR03374 395 VNWANDSQYGLASSVWTKDVGRAHRLSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYG----KDMSLYGLEDYTVVRHIM 470 (472)
T ss_pred HHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccCccC----ccchHHHHHHhhceEEEE
Confidence 9999999999999999999999999999999999999987766778999999999986 357999999999999987
Q ss_pred E
Q 005047 693 R 693 (716)
Q Consensus 693 ~ 693 (716)
+
T Consensus 471 ~ 471 (472)
T TIGR03374 471 V 471 (472)
T ss_pred E
Confidence 5
No 13
>PLN02315 aldehyde dehydrogenase family 7 member
Probab=100.00 E-value=1.1e-75 Score=660.33 Aligned_cols=403 Identities=16% Similarity=0.200 Sum_probs=342.8
Q ss_pred HHHHhcCCcceeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Q 005047 267 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 346 (716)
Q Consensus 267 l~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~ 346 (716)
..+|.+++.++++..++ .+|+++|+++|++||+.|++++.++|.++|++++++|++|+++|++++++|++++..
T Consensus 38 ~~nP~t~~~i~~~~~a~------~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~GK~~~ 111 (508)
T PLN02315 38 SVNPANNQPIAEVVEAS------LEDYEEGLRACEEAAKIWMQVPAPKRGEIVRQIGDALRAKLDYLGRLVSLEMGKILA 111 (508)
T ss_pred eECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHH
Confidence 36788999999998888 889999999999999999999999999999999999999999999998877654431
Q ss_pred hchhHHHHHHhhcCHHHHHHHHHHHHHHhccccc-ccccccccccCCCeEEEEeecceeEEEEEcCC-Cch-hHHHHHHH
Q 005047 347 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 423 (716)
Q Consensus 347 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~-~P~-~~~~~~~~ 423 (716)
++ ..|+...++.++++++..+. .+...+.. ..+...+..|+|+|||++|+|| ||. ++++++++
T Consensus 112 ----~a--------~~ev~~~i~~~~~~~~~~~~l~~~~~~~~--~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ 177 (508)
T PLN02315 112 ----EG--------IGEVQEIIDMCDFAVGLSRQLNGSIIPSE--RPNHMMMEVWNPLGIVGVITAFNFPCAVLGWNACI 177 (508)
T ss_pred ----HH--------HHHHHHHHHHHHHHHHHHHHhcCccccCC--CCCceeEEEEecceEEEEECCCcchHHHHHHHHhH
Confidence 22 23566666667766543321 22222211 1233456789999999999998 795 67899999
Q ss_pred HHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecCCchHHHhhcCCCCccEEEeecCHHHHHHHHHhc-
Q 005047 424 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST- 501 (716)
Q Consensus 424 ALaaGNtvv~Kps~~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a- 501 (716)
||++||+||+|||+.||+++..+++++.+++.++ +|+|++|+|+|+.++++.|..||+||+|+||||+++|+.|++.+
T Consensus 178 ALaaGN~VVlKPs~~tp~~~~~~~~l~~~~~~~aGlP~gvv~~v~g~~~~~~~l~~~~~v~~v~fTGS~~~G~~v~~~aa 257 (508)
T PLN02315 178 ALVCGNCVVWKGAPTTPLITIAMTKLVAEVLEKNNLPGAIFTSFCGGAEIGEAIAKDTRIPLVSFTGSSKVGLMVQQTVN 257 (508)
T ss_pred HHHcCCEEEeeCCCcChHHHHHHHHHHHHHHHHcCCCcccEEEecCChHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHH
Confidence 9999999999999999999999888887777789 99999999998667888899999999999999999999999866
Q ss_pred --CCCEEEecCCcceEEEcCCCCHHHHHHHHHHhcCCCCC-ccccccceEEEeCccCChhhHHHHHHHHHhcCC------
Q 005047 502 --KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMVETLLVHKDLACNGALNELVVELQHEGV------ 572 (716)
Q Consensus 502 --~~~~~lElGGk~p~iV~~dADl~~Aa~~iv~~~f~n~g-~C~a~~~rv~V~~~i~dd~f~~~l~~~~~~~~~------ 572 (716)
.+|+++|||||||+||++|||+|.|++.+++|+|.|+| .|+|+ +|+|||++|| |+|+++|+++++++.+
T Consensus 258 ~~~~~~~lElgGknp~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~-~rv~V~~~i~-d~f~~~l~~~~~~l~vG~p~~~ 335 (508)
T PLN02315 258 ARFGKCLLELSGNNAIIVMDDADIQLAVRSVLFAAVGTAGQRCTTC-RRLLLHESIY-DDVLEQLLTVYKQVKIGDPLEK 335 (508)
T ss_pred hcCCCEEEecCCCCeEEECCCCCHHHHHHHHHHHHHHhcCCCCCCC-eEEEEeHHHH-HHHHHHHHHHHHhcCCCCCCCC
Confidence 38999999999999999999999999999999999976 99999 9999999999 7999999999987632
Q ss_pred ----------------------------EE-ecCccc--cc-cc-c-C----CCCccccccccCceEEEEEeCCHHHHHH
Q 005047 573 ----------------------------GL-FGGPRA--SK-LL-Q-I----PETRLFHHEYNSMVCTVEIVDDVRAAID 614 (716)
Q Consensus 573 ----------------------------~~-~g~~~~--~~-~~-p-v----~~~~~~~eE~FGPVl~v~~~~~~deAi~ 614 (716)
++ .|+.+. .+ |+ | | ++|++++||+||||++|++|+|+||||+
T Consensus 336 ~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~~~g~~~~Ptvl~v~~~~~i~~eE~FGPVl~V~~~~~~deai~ 415 (508)
T PLN02315 336 GTLLGPLHTPESKKNFEKGIEIIKSQGGKILTGGSAIESEGNFVQPTIVEISPDADVVKEELFGPVLYVMKFKTLEEAIE 415 (508)
T ss_pred CCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCCCeEEecEEEecCCCChHHhCCCcCCEEEEEEeCCHHHHHH
Confidence 11 233221 13 33 5 2 4789999999999999999999999999
Q ss_pred HHHhcCCCceeEEEccCHHHHHHHHH--ccCcceEEEcCCcCC-CCCCcccCcceeeccccccccccccchhcccEEEEE
Q 005047 615 HIHQHGSAHTDCIVAEDQKVAETFLC--QVDSAAVFHNASTRF-CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWI 691 (716)
Q Consensus 615 ~aN~~~~GL~a~i~t~d~~~a~~~~~--~~~~G~v~vN~~~~~-~~~~p~g~g~~sG~~~~~~~~~g~~gl~~ft~~k~v 691 (716)
++|+++|||++||||+|.++++++++ ++++|+||||.++.. .+.+||||.+.||+| +++|.+|+++||+.|+|
T Consensus 416 ~aN~~~~gL~a~Vft~d~~~a~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G----~~~G~~~l~~ft~~k~v 491 (508)
T PLN02315 416 INNSVPQGLSSSIFTRNPETIFKWIGPLGSDCGIVNVNIPTNGAEIGGAFGGEKATGGG----REAGSDSWKQYMRRSTC 491 (508)
T ss_pred HHhCCCCCCeEEEEcCCHHHHHHHhhhcccceeEEEEcCCCCCCCCCCCCCccccccCC----ccchHHHHHHHhhEEEE
Confidence 99999999999999999999999985 799999999986543 467899999999986 35689999999999999
Q ss_pred EEcC
Q 005047 692 LRGN 695 (716)
Q Consensus 692 ~~~~ 695 (716)
+++.
T Consensus 492 ~~~~ 495 (508)
T PLN02315 492 TINY 495 (508)
T ss_pred EEec
Confidence 8764
No 14
>PLN02766 coniferyl-aldehyde dehydrogenase
Probab=100.00 E-value=1.1e-75 Score=661.18 Aligned_cols=399 Identities=18% Similarity=0.191 Sum_probs=341.0
Q ss_pred HHHHhcCCcceeEEecCCccccchhhHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Q 005047 267 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSR--RLQALQSQDRRKILLDVADALEANESLIKVENEADVAAA 344 (716)
Q Consensus 267 l~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~ 344 (716)
..+|.+|+.++++...+ .+|+++++++|++||+ .|+.++.++|.++|++++++|++|+++|++++++|+++.
T Consensus 40 ~~~P~tg~~i~~~~~~~------~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~ 113 (501)
T PLN02766 40 TRDPRTGEVIARIAEGD------KEDVDLAVKAAREAFDHGPWPRMSGFERGRIMMKFADLIEEHIEELAALDTIDAGKL 113 (501)
T ss_pred eECCCCCCEEEEEeCCC------HHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCC
Confidence 36788999999999888 8999999999999998 599999999999999999999999999999988776543
Q ss_pred HHhchhHHHHHHhhcCHHHHHHHHHHHHHHhcccc-cccccccccccCCCeEEEEeecceeEEEEEcCC-Cch-hHHHHH
Q 005047 345 QEAGYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIA 421 (716)
Q Consensus 345 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~-~P~-~~~~~~ 421 (716)
.. ++. ..++...++.+++++...+ ..|+..+. ..+...+++|+|+|||++|+|| ||. +.++++
T Consensus 114 ~~----~a~-------~~ev~~~~~~l~~~a~~~~~~~g~~~~~---~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~ 179 (501)
T PLN02766 114 FA----LGK-------AVDIPAAAGLLRYYAGAADKIHGETLKM---SRQLQGYTLKEPIGVVGHIIPWNFPSTMFFMKV 179 (501)
T ss_pred HH----HHH-------HHHHHHHHHHHHHHHHHHHHhcCceecc---CCCceEEEEeccceEEEEECCCCChHHHHHHHH
Confidence 21 221 1245566666766664332 22332221 1234567889999999999998 696 567999
Q ss_pred HHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CchHHHhhcCCCCccEEEeecCHHHHHHHHH
Q 005047 422 SLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKE 499 (716)
Q Consensus 422 ~~ALaaGNtvv~Kps~~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~ 499 (716)
+|||++||+||+|||+.||+++.++++++.+ + ||+|++|+|+| +.++++.|..||+||+|+||||+++||.|++
T Consensus 180 ~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~----aGlP~gvv~~v~g~~~~~~~~L~~~p~v~~V~FTGS~~~G~~i~~ 255 (501)
T PLN02766 180 APALAAGCTMVVKPAEQTPLSALFYAHLAKL----AGVPDGVINVVTGFGPTAGAAIASHMDVDKVSFTGSTEVGRKIMQ 255 (501)
T ss_pred HHHHHcCCEEEEeCCCCchHHHHHHHHHHHh----cCCCcCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHH
Confidence 9999999999999999999999999999986 8 99999999996 6678898999999999999999999999998
Q ss_pred hcC----CCEEEecCCcceEEEcCCCCHHHHHHHHHHhcCCCCC-ccccccceEEEeCccCChhhHHHHHHHHHhcCC--
Q 005047 500 STK----IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMVETLLVHKDLACNGALNELVVELQHEGV-- 572 (716)
Q Consensus 500 ~a~----~~~~lElGGk~p~iV~~dADl~~Aa~~iv~~~f~n~g-~C~a~~~rv~V~~~i~dd~f~~~l~~~~~~~~~-- 572 (716)
.+. +|+++|||||||+||++|||+|.|++.+++|+|.|+| +|+|+ +|||||++|| |+|+++|+++++++.+
T Consensus 256 ~aa~~~l~~~~lElGGknp~iV~~dADl~~Aa~~i~~g~f~n~GQ~C~a~-~ri~V~~si~-d~f~~~l~~~~~~l~~G~ 333 (501)
T PLN02766 256 AAATSNLKQVSLELGGKSPLLIFDDADVDMAVDLALLGIFYNKGEICVAS-SRVYVQEGIY-DEFVKKLVEKAKDWVVGD 333 (501)
T ss_pred HhhhcCCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhhcCCCCCCC-eEEEEcHHHH-HHHHHHHHHHHHhccCCC
Confidence 663 7999999999999999999999999999999999976 99999 9999999999 7999999999887521
Q ss_pred --------------------------------EE-ecCccc--cc-cc-c-C-----CCCccccccccCceEEEEEeCCH
Q 005047 573 --------------------------------GL-FGGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDV 609 (716)
Q Consensus 573 --------------------------------~~-~g~~~~--~~-~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~ 609 (716)
++ .|+... .+ |+ | | ++|++++||+||||++|++|+|+
T Consensus 334 p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~ 413 (501)
T PLN02766 334 PFDPRARQGPQVDKQQFEKILSYIEHGKREGATLLTGGKPCGDKGYYIEPTIFTDVTEDMKIAQDEIFGPVMSLMKFKTV 413 (501)
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCCCCCeEEeeEEEecCCCCChhhhCCccCceEEEEEeCCH
Confidence 22 233321 23 33 5 2 46899999999999999999999
Q ss_pred HHHHHHHHhcCCCceeEEEccCHHHHHHHHHccCcceEEEcCCcCCCCCCcccCcceeeccccccccccccchhcccEEE
Q 005047 610 RAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTR 689 (716)
Q Consensus 610 deAi~~aN~~~~GL~a~i~t~d~~~a~~~~~~~~~G~v~vN~~~~~~~~~p~g~g~~sG~~~~~~~~~g~~gl~~ft~~k 689 (716)
||||+++|+++|||++||||+|.+++.++++++++|+|+||+.....+..||||.+.||+| +++|++|+++||+.|
T Consensus 414 deai~~aN~~~~GL~a~Vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G----~~~G~~~l~~ft~~k 489 (501)
T PLN02766 414 EEAIKKANNTKYGLAAGIVTKDLDVANTVSRSIRAGTIWVNCYFAFDPDCPFGGYKMSGFG----RDQGMDALDKYLQVK 489 (501)
T ss_pred HHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccCcCC----ccchHHHHHHHhceE
Confidence 9999999999999999999999999999999999999999987666677899999999986 356999999999999
Q ss_pred EEEEcC
Q 005047 690 WILRGN 695 (716)
Q Consensus 690 ~v~~~~ 695 (716)
+|++..
T Consensus 490 ~v~~~~ 495 (501)
T PLN02766 490 SVVTPL 495 (501)
T ss_pred EEEEec
Confidence 998753
No 15
>PRK13968 putative succinate semialdehyde dehydrogenase; Provisional
Probab=100.00 E-value=3.7e-75 Score=651.88 Aligned_cols=395 Identities=16% Similarity=0.217 Sum_probs=335.7
Q ss_pred HHHhcCCcceeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHh
Q 005047 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 347 (716)
Q Consensus 268 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~ 347 (716)
.+|.+|+.++++..++ .+++++++++|++||+.|++++.++|.++|++++++|++|+++|++++++|.+++..
T Consensus 12 ~nP~t~~~i~~~~~~~------~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~- 84 (462)
T PRK13968 12 VNPATGEQLSVLPWAG------ADDIENALQLAAAGFRDWRETNIDYRAQKLRDIGKALRARSEEMAQMITREMGKPIN- 84 (462)
T ss_pred ECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhCCCHH-
Confidence 4678999999999888 899999999999999999999999999999999999999999999998877655431
Q ss_pred chhHHHHHHhhcCHHHHHHHHHHHHHHhcccc-cccccccccccCCCeEEEEeecceeEEEEEcCC-Cch-hHHHHHHHH
Q 005047 348 GYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 424 (716)
Q Consensus 348 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~-~P~-~~~~~~~~A 424 (716)
++. .|+...++.+++++...+ ..+..... ..+...+++|+|+|||++|+|| ||. +.+++++||
T Consensus 85 ---~a~--------~ev~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~GvV~~I~PwN~P~~~~~~~~~~A 150 (462)
T PRK13968 85 ---QAR--------AEVAKSANLCDWYAEHGPAMLKAEPTL---VENQQAVIEYRPLGTILAIMPWNFPLWQVMRGAVPI 150 (462)
T ss_pred ---HHH--------HHHHHHHHHHHHHHHHHHHhhCCcccc---CCCceEEEEEeccceEEEEcCCchHHHHHHHHHHHH
Confidence 221 245556666665554321 11111110 1234567889999999999998 695 567899999
Q ss_pred HHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CchHHHhhcCCCCccEEEeecCHHHHHHHHHhc-
Q 005047 425 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST- 501 (716)
Q Consensus 425 LaaGNtvv~Kps~~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a- 501 (716)
|++||+||+|||+.||+++.++++++.+ + +|+|++|+|+| +++.+. +..||+||+|+||||+++|+.|++.+
T Consensus 151 LaaGN~vv~KPs~~tp~~~~~l~~~~~~----aGlP~gv~~~v~g~~~~~~~-l~~~~~v~~V~fTGs~~~G~~i~~~aa 225 (462)
T PRK13968 151 LLAGNGYLLKHAPNVMGCAQLIAQVFKD----AGIPQGVYGWLNADNDGVSQ-MINDSRIAAVTVTGSVRAGAAIGAQAG 225 (462)
T ss_pred HHcCCEEEEECCCcChHHHHHHHHHHHH----cCcCcCcEEEEecCchhhHH-HhcCCCCCEEEEECCHHHHHHHHHHHh
Confidence 9999999999999999999999999986 8 99999999996 444454 66789999999999999999999887
Q ss_pred --CCCEEEecCCcceEEEcCCCCHHHHHHHHHHhcCCCCC-ccccccceEEEeCccCChhhHHHHHHHHHhcCC------
Q 005047 502 --KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMVETLLVHKDLACNGALNELVVELQHEGV------ 572 (716)
Q Consensus 502 --~~~~~lElGGk~p~iV~~dADl~~Aa~~iv~~~f~n~g-~C~a~~~rv~V~~~i~dd~f~~~l~~~~~~~~~------ 572 (716)
.||++||||||||+||++|||+|.|++.+++++|.|+| .|+|+ +|+|||++|| |+|+++|+++++++.+
T Consensus 226 ~~l~~~~lElGGk~p~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~-~rv~V~~~i~-~~f~~~l~~~~~~~~~g~p~~~ 303 (462)
T PRK13968 226 AALKKCVLELGGSDPFIVLNDADLELAVKAAVAGRYQNTGQVCAAA-KRFIIEEGIA-SAFTERFVAAAAALKMGDPRDE 303 (462)
T ss_pred hcCCcEEEecCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCcCC-cEEEECHhHH-HHHHHHHHHHHhcCCcCCCCCC
Confidence 48999999999999999999999999999999999987 99999 9999999999 7999999999887632
Q ss_pred ----------------------------EE-ecCccc--cc-cc-c-C-----CCCccccccccCceEEEEEeCCHHHHH
Q 005047 573 ----------------------------GL-FGGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAI 613 (716)
Q Consensus 573 ----------------------------~~-~g~~~~--~~-~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi 613 (716)
++ +|+.+. .+ ++ | | ++|++++||+||||++|++|+|+||||
T Consensus 304 ~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~d~~eai 383 (462)
T PRK13968 304 ENALGPMARFDLRDELHHQVEATLAEGARLLLGGEKIAGAGNYYAPTVLANVTPEMTAFREELFGPVAAITVAKDAEHAL 383 (462)
T ss_pred CCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCceEECCEEEeCCCCCChHHhCCCcCCEEEEEEECCHHHHH
Confidence 12 233321 13 33 5 2 358899999999999999999999999
Q ss_pred HHHHhcCCCceeEEEccCHHHHHHHHHccCcceEEEcCCcCCCCCCcccCcceeeccccccccccccchhcccEEEEEEE
Q 005047 614 DHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILR 693 (716)
Q Consensus 614 ~~aN~~~~GL~a~i~t~d~~~a~~~~~~~~~G~v~vN~~~~~~~~~p~g~g~~sG~~~~~~~~~g~~gl~~ft~~k~v~~ 693 (716)
+++|+++|||++||||+|.+++.++++++++|+|+||+.....+..||||.+.||+| +++|++|+++||+.|+|.+
T Consensus 384 ~~~n~~~~gLs~~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G----~~~G~~~l~~ft~~k~v~~ 459 (462)
T PRK13968 384 ELANDSEFGLSATIFTTDETQARQMAARLECGGVFINGYCASDARVAFGGVKKSGFG----RELSHFGLHEFCNIQTVWK 459 (462)
T ss_pred HHHhCCCCcceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCccccccC----cCchHHHHHHhcceeEEEE
Confidence 999999999999999999999999999999999999987666667899999999986 3579999999999999976
Q ss_pred c
Q 005047 694 G 694 (716)
Q Consensus 694 ~ 694 (716)
.
T Consensus 460 ~ 460 (462)
T PRK13968 460 D 460 (462)
T ss_pred e
Confidence 4
No 16
>PRK09406 gabD1 succinic semialdehyde dehydrogenase; Reviewed
Probab=100.00 E-value=5.3e-75 Score=649.75 Aligned_cols=398 Identities=19% Similarity=0.199 Sum_probs=335.0
Q ss_pred HHHhcCCcceeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHh
Q 005047 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 347 (716)
Q Consensus 268 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~ 347 (716)
.+|.+|+.++++..++ .+|+++++++|++||+.|+++|.++|.++|++++++|++++++|++++++|+|++..
T Consensus 6 ~~P~t~~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~- 78 (457)
T PRK09406 6 INPATGETVKTFTALT------DDEVDAAIARAHARFRDYRTTTFAQRARWANAAADLLEAEADQVAALMTLEMGKTLA- 78 (457)
T ss_pred ECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHhcCCCHH-
Confidence 4678999999998888 889999999999999999999999999999999999999999999998877655431
Q ss_pred chhHHHHHHhhcCHHHHHHHHHHHHHHhccccc-ccccccccccCCCeEEEEeecceeEEEEEcCC-Cch-hHHHHHHHH
Q 005047 348 GYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 424 (716)
Q Consensus 348 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~-~P~-~~~~~~~~A 424 (716)
++. .|+...++.+++++...+. .+..........+...+++++|+|||++|+|| ||. +.++++++|
T Consensus 79 ---~a~--------~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~PwN~Pl~~~~~~~~~A 147 (457)
T PRK09406 79 ---SAK--------AEALKCAKGFRYYAEHAEALLADEPADAAAVGASRAYVRYQPLGVVLAVMPWNFPLWQVVRFAAPA 147 (457)
T ss_pred ---HHH--------HHHHHHHHHHHHHHHHHHHHhCCccccccCCCCceEEEEEecceeEEEECCccchHHHHHHHHHHH
Confidence 221 2455555555555433211 11111000001223567889999999999998 696 578999999
Q ss_pred HHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecCCchHHHhhcCCCCccEEEeecCHHHHHHHHHhcC-
Q 005047 425 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK- 502 (716)
Q Consensus 425 LaaGNtvv~Kps~~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a~- 502 (716)
|++||+||+|||+.||+++.++++++.+ + ||+|+||+|+++...+..|..||+|++|+||||+++|+.|++.++
T Consensus 148 LaaGN~VV~Kps~~~p~~~~~l~~l~~~----aGlP~gvv~~v~~g~~~~~~l~~~~~i~~V~fTGs~~~G~~i~~~a~~ 223 (457)
T PRK09406 148 LMAGNVGLLKHASNVPQTALYLADLFRR----AGFPDGCFQTLLVGSGAVEAILRDPRVAAATLTGSEPAGRAVAAIAGD 223 (457)
T ss_pred HHcCCEEEEECCCcCcHHHHHHHHHHHH----hCCCcCcEEEEcCCchhHHHHhcCCCcCEEEEECcHHHHHHHHHHHHh
Confidence 9999999999999999999999999986 8 999999999844335556678999999999999999999988773
Q ss_pred --CCEEEecCCcceEEEcCCCCHHHHHHHHHHhcCCCCC-ccccccceEEEeCccCChhhHHHHHHHHHhcCC-------
Q 005047 503 --IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMVETLLVHKDLACNGALNELVVELQHEGV------- 572 (716)
Q Consensus 503 --~~~~lElGGk~p~iV~~dADl~~Aa~~iv~~~f~n~g-~C~a~~~rv~V~~~i~dd~f~~~l~~~~~~~~~------- 572 (716)
||++||||||||+||++|||+|.|++.+++++|.|+| .|+++ +|+|||+++| |+|+++|+++++++++
T Consensus 224 ~~~~~~lElGG~~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~-~rv~V~~~i~-d~f~~~l~~~~~~l~~g~p~~~~ 301 (457)
T PRK09406 224 EIKKTVLELGGSDPFIVMPSADLDRAAETAVTARVQNNGQSCIAA-KRFIVHADVY-DAFAEKFVARMAALRVGDPTDPD 301 (457)
T ss_pred cCCceeeecCCCCeeEECCCCCHHHHHHHHHHHHhhCCCCcccCC-eEEEEcHHHH-HHHHHHHHHHHhhCCCCCCCCCC
Confidence 8999999999999999999999999999999999987 99999 9999999999 7999999999987632
Q ss_pred ---------------------------EE-ecCccc--ccc-c-c-C-----CCCccccccccCceEEEEEeCCHHHHHH
Q 005047 573 ---------------------------GL-FGGPRA--SKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAID 614 (716)
Q Consensus 573 ---------------------------~~-~g~~~~--~~~-~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi~ 614 (716)
++ .|+.+. .++ + | | ++|++++||+||||++|++|+|+||||+
T Consensus 302 ~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~ 381 (457)
T PRK09406 302 TDVGPLATEQGRDEVEKQVDDAVAAGATILCGGKRPDGPGWFYPPTVITDITPDMRLYTEEVFGPVASLYRVADIDEAIE 381 (457)
T ss_pred CCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCceEccEEeecCCCCCHHhhCCCCCceEEEEeeCCHHHHHH
Confidence 11 233321 233 3 5 2 3588999999999999999999999999
Q ss_pred HHHhcCCCceeEEEccCHHHHHHHHHccCcceEEEcCCcCCCCCCcccCcceeeccccccccccccchhcccEEEEEEE
Q 005047 615 HIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILR 693 (716)
Q Consensus 615 ~aN~~~~GL~a~i~t~d~~~a~~~~~~~~~G~v~vN~~~~~~~~~p~g~g~~sG~~~~~~~~~g~~gl~~ft~~k~v~~ 693 (716)
++|+++|||++||||+|.++++++++++++|+||||+++...+..||||.+.||+| +++|++|+++||+.|+|++
T Consensus 382 ~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G----~~~g~~~l~~~t~~k~v~~ 456 (457)
T PRK09406 382 IANATTFGLGSNAWTRDEAEQERFIDDLEAGQVFINGMTVSYPELPFGGVKRSGYG----RELSAHGIREFCNIKTVWI 456 (457)
T ss_pred HHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCccccccC----ccchHHHHHHhhceEEEEe
Confidence 99999999999999999999999999999999999998777777999999999986 3568999999999999875
No 17
>PLN02278 succinic semialdehyde dehydrogenase
Probab=100.00 E-value=6.4e-75 Score=655.18 Aligned_cols=398 Identities=16% Similarity=0.179 Sum_probs=341.5
Q ss_pred HHHHhcCCcceeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Q 005047 267 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 346 (716)
Q Consensus 267 l~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~ 346 (716)
+.+|.+|+.++++...+ .+|+++++++|++||+.|+++|.++|.++|++++++|++|+++|++++++|++++..
T Consensus 44 v~~P~tg~~i~~~~~~~------~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ 117 (498)
T PLN02278 44 VYNPATGEVIANVPCMG------RAETNDAIASAHDAFPSWSKLTASERSKILRRWYDLIIANKEDLAQLMTLEQGKPLK 117 (498)
T ss_pred EECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH
Confidence 46789999999998888 889999999999999999999999999999999999999999999998877654431
Q ss_pred hchhHHHHHHhhcCHHHHHHHHHHHHHHhccccc-ccccccccccCCCeEEEEeecceeEEEEEcCC-Cch-hHHHHHHH
Q 005047 347 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 423 (716)
Q Consensus 347 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~-~P~-~~~~~~~~ 423 (716)
++ ..|+..+++.+++++...+. .|...+.. ..+...+++|+|+|||++|+|| ||. +.+++++|
T Consensus 118 ----~a--------~~Ev~~~i~~~~~~~~~~~~~~g~~~~~~--~~~~~~~~~~~P~GvV~~I~PwN~P~~~~~~~i~~ 183 (498)
T PLN02278 118 ----EA--------IGEVAYGASFLEYFAEEAKRVYGDIIPSP--FPDRRLLVLKQPVGVVGAITPWNFPLAMITRKVGP 183 (498)
T ss_pred ----HH--------HHHHHHHHHHHHHHHHHHHHhcCcccccC--CCCceEEEEeecccEEEEECCCccHHHHHHHHHHH
Confidence 22 13566667777766644322 23322211 1233567789999999999998 695 57899999
Q ss_pred HHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CchHHHhhcCCCCccEEEeecCHHHHHHHHHhc
Q 005047 424 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST 501 (716)
Q Consensus 424 ALaaGNtvv~Kps~~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a 501 (716)
||++||+||+|||+.||+++..|++++.+ + +|+|++|+|+| ++++++.|..||+||+|+||||+++|+.|++.+
T Consensus 184 ALaaGN~VVlKps~~tp~~~~~l~~~l~e----aglP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~a 259 (498)
T PLN02278 184 ALAAGCTVVVKPSELTPLTALAAAELALQ----AGIPPGVLNVVMGDAPEIGDALLASPKVRKITFTGSTAVGKKLMAGA 259 (498)
T ss_pred HHHcCCEEEEECCCCChHHHHHHHHHHHH----cCCCcccEEEEecCChhhHHHHhcCCCcCEEEEECcHHHHHHHHHHH
Confidence 99999999999999999999999999986 7 99999999996 556788888999999999999999999999877
Q ss_pred C---CCEEEecCCcceEEEcCCCCHHHHHHHHHHhcCCCCC-ccccccceEEEeCccCChhhHHHHHHHHHhcCC-----
Q 005047 502 K---IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMVETLLVHKDLACNGALNELVVELQHEGV----- 572 (716)
Q Consensus 502 ~---~~~~lElGGk~p~iV~~dADl~~Aa~~iv~~~f~n~g-~C~a~~~rv~V~~~i~dd~f~~~l~~~~~~~~~----- 572 (716)
+ ||++||||||||+||++|||+|.|++.+++++|.|+| .|+|+ +|+|||++|| |+|+++|+++++++.+
T Consensus 260 a~~~~~~~lElGGk~~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~-~rv~V~~~i~-~~f~~~L~~~~~~l~~G~p~~ 337 (498)
T PLN02278 260 AATVKRVSLELGGNAPFIVFDDADLDVAVKGALASKFRNSGQTCVCA-NRILVQEGIY-DKFAEAFSKAVQKLVVGDGFE 337 (498)
T ss_pred hhcCCcEEEecCCCCeeEECCCCCHHHHHHHHHHHHhccCCCCCcCC-cEEEEeHHHH-HHHHHHHHHHHHhcCCCCCCC
Confidence 3 8999999999999999999999999999999999987 99999 9999999999 7999999999887631
Q ss_pred -----------------------------EE-ecCccc--cc-cc-c-C-----CCCccccccccCceEEEEEeCCHHHH
Q 005047 573 -----------------------------GL-FGGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAA 612 (716)
Q Consensus 573 -----------------------------~~-~g~~~~--~~-~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deA 612 (716)
++ .|+... .+ |+ | | +++++++||+||||++|++|+|+|||
T Consensus 338 ~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~~~g~~~~Ptvl~~v~~~~~~~~~E~FGPVl~v~~~~~~dea 417 (498)
T PLN02278 338 EGVTQGPLINEAAVQKVESHVQDAVSKGAKVLLGGKRHSLGGTFYEPTVLGDVTEDMLIFREEVFGPVAPLTRFKTEEEA 417 (498)
T ss_pred CCCcCCCccCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCceEeeEEEecCCCCChhhhCCCcCCEEEEEeeCCHHHH
Confidence 11 233221 13 33 5 2 46899999999999999999999999
Q ss_pred HHHHHhcCCCceeEEEccCHHHHHHHHHccCcceEEEcCCcCCCCCCcccCcceeeccccccccccccchhcccEEEEEE
Q 005047 613 IDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 692 (716)
Q Consensus 613 i~~aN~~~~GL~a~i~t~d~~~a~~~~~~~~~G~v~vN~~~~~~~~~p~g~g~~sG~~~~~~~~~g~~gl~~ft~~k~v~ 692 (716)
|+++|+++|||++||||+|.++++++++++++|.||||+.....+.+||||.+.||+| +++|++|+++||+.|+|.
T Consensus 418 i~~~N~~~~gL~a~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G----~~~G~~~l~~ft~~k~i~ 493 (498)
T PLN02278 418 IAIANDTEAGLAAYIFTRDLQRAWRVSEALEYGIVGVNEGLISTEVAPFGGVKQSGLG----REGSKYGIDEYLEIKYVC 493 (498)
T ss_pred HHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCcCCcccCcCC----ccchHHHHHHhheeEEEE
Confidence 9999999999999999999999999999999999999987655567899999999986 357999999999999997
Q ss_pred Ec
Q 005047 693 RG 694 (716)
Q Consensus 693 ~~ 694 (716)
++
T Consensus 494 ~~ 495 (498)
T PLN02278 494 LG 495 (498)
T ss_pred Ee
Confidence 64
No 18
>PLN02466 aldehyde dehydrogenase family 2 member
Probab=100.00 E-value=4.1e-75 Score=659.10 Aligned_cols=397 Identities=17% Similarity=0.190 Sum_probs=339.9
Q ss_pred HHHhcCCcceeEEecCCccccchhhHHHHHHHHHHHHHH--HhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Q 005047 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRR--LQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQ 345 (716)
Q Consensus 268 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~--w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~ 345 (716)
.+|.+|+.++++...+ .+|+++|+++|++||++ |++++.++|.++|++++++|++|+++|++++++|.++..
T Consensus 78 ~~P~tg~~i~~v~~~~------~~dv~~Av~aA~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~GK~~ 151 (538)
T PLN02466 78 LDPRTGEVIAHVAEGD------AEDVNRAVAAARKAFDEGPWPKMTAYERSRILLRFADLLEKHNDELAALETWDNGKPY 151 (538)
T ss_pred ECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHcCcCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH
Confidence 4577899999998888 89999999999999984 999999999999999999999999999999887765432
Q ss_pred HhchhHHHHHHhhcCHHHHHHHHHHHHHHhccccc-ccccccccccCCCeEEEEeecceeEEEEEcCC-Cch-hHHHHHH
Q 005047 346 EAGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIAS 422 (716)
Q Consensus 346 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~-~P~-~~~~~~~ 422 (716)
. ++. ..|+...++.+++++.+.+. .+...+. ..+...+++++|+|||++|+|| ||. +.+++++
T Consensus 152 ~----~a~-------~~Ev~~~~~~l~~~a~~~~~~~g~~~~~---~~~~~~~~~~~P~GVV~~I~PwN~P~~l~~~~i~ 217 (538)
T PLN02466 152 E----QSA-------KAELPMFARLFRYYAGWADKIHGLTVPA---DGPHHVQTLHEPIGVAGQIIPWNFPLLMFAWKVG 217 (538)
T ss_pred H----HHH-------HHHHHHHHHHHHHHHHHHHHhcCccccc---CCCceEEEEEecceEEEEECCCchHHHHHHHHHh
Confidence 1 221 13666777777777655432 2332221 1223467889999999999998 696 5689999
Q ss_pred HHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CchHHHhhcCCCCccEEEeecCHHHHHHHHHh
Q 005047 423 LAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKES 500 (716)
Q Consensus 423 ~ALaaGNtvv~Kps~~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~ 500 (716)
|||++||+||+|||+.||+++.++++++.+ + ||+|+||+|+| ++++++.|..||+||+|+||||+++|+.|++.
T Consensus 218 pALaaGN~VVlKPs~~tp~~~~~l~~ll~e----aGlP~gvv~vv~g~~~~~~~~L~~~~~vd~V~FTGS~~~G~~v~~~ 293 (538)
T PLN02466 218 PALACGNTIVLKTAEQTPLSALYAAKLLHE----AGLPPGVLNVVSGFGPTAGAALASHMDVDKLAFTGSTDTGKIVLEL 293 (538)
T ss_pred HHHHcCCEEEeECCCCCcHHHHHHHHHHHh----cCCCcccEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHH
Confidence 999999999999999999999999999986 8 99999999996 56788889999999999999999999999886
Q ss_pred cC----CCEEEecCCcceEEEcCCCCHHHHHHHHHHhcCCCCC-ccccccceEEEeCccCChhhHHHHHHHHHhcCC---
Q 005047 501 TK----IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMVETLLVHKDLACNGALNELVVELQHEGV--- 572 (716)
Q Consensus 501 a~----~~~~lElGGk~p~iV~~dADl~~Aa~~iv~~~f~n~g-~C~a~~~rv~V~~~i~dd~f~~~l~~~~~~~~~--- 572 (716)
+. ||+++|||||||+||++|||+|.|++.+++++|.|+| .|+|+ +|+|||+++| |+|+++|++++.++.+
T Consensus 294 aa~~~l~pv~lElGGknp~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~-~rv~V~~~i~-d~f~~~l~~~~~~~~vG~p 371 (538)
T PLN02466 294 AAKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAG-SRTFVHERVY-DEFVEKAKARALKRVVGDP 371 (538)
T ss_pred HHhcCCCcEEEEcCCCCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCcC-cEEEEcHHHH-HHHHHHHHHHHHhccCCCC
Confidence 63 7999999999999999999999999999999999987 99999 9999999999 7999999987766421
Q ss_pred -------------------------------EE-ecCccc--cc-cc-c-C-----CCCccccccccCceEEEEEeCCHH
Q 005047 573 -------------------------------GL-FGGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVR 610 (716)
Q Consensus 573 -------------------------------~~-~g~~~~--~~-~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~d 610 (716)
++ +|+.+. .+ |+ | | ++|++++||+||||++|++|+|+|
T Consensus 372 ~~~~~~~Gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~g~~i~Ptvl~~v~~d~~i~~eE~FGPVl~v~~~~d~d 451 (538)
T PLN02466 372 FKKGVEQGPQIDSEQFEKILRYIKSGVESGATLECGGDRFGSKGYYIQPTVFSNVQDDMLIAQDEIFGPVQSILKFKDLD 451 (538)
T ss_pred ccCCCCCccCCCHHHHHHHHHHHHHHHHCCCEEEecCCcCCCCceEEEEEEEecCCCCCchhcCCccCcEEEEEEeCCHH
Confidence 12 233221 13 33 5 2 468999999999999999999999
Q ss_pred HHHHHHHhcCCCceeEEEccCHHHHHHHHHccCcceEEEcCCcCCCCCCcccCcceeeccccccccccccchhcccEEEE
Q 005047 611 AAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRW 690 (716)
Q Consensus 611 eAi~~aN~~~~GL~a~i~t~d~~~a~~~~~~~~~G~v~vN~~~~~~~~~p~g~g~~sG~~~~~~~~~g~~gl~~ft~~k~ 690 (716)
|||+++|+++|||++||||+|.+++.+|++++++|+|+||+.....+..||||.+.||+| +++|++|+++||+.|+
T Consensus 452 eAi~~aN~~~~GL~a~VfT~d~~~a~~~~~~l~aG~v~IN~~~~~~~~~PfGG~k~SG~G----~~~G~~gl~~ft~~k~ 527 (538)
T PLN02466 452 EVIRRANNTRYGLAAGVFTQNLDTANTLSRALRVGTVWVNCFDVFDAAIPFGGYKMSGIG----REKGIYSLNNYLQVKA 527 (538)
T ss_pred HHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCcCCCCcCccC----cccHHHHHHHhcceEE
Confidence 999999999999999999999999999999999999999987666677899999999986 3579999999999999
Q ss_pred EEEc
Q 005047 691 ILRG 694 (716)
Q Consensus 691 v~~~ 694 (716)
|++.
T Consensus 528 v~~~ 531 (538)
T PLN02466 528 VVTP 531 (538)
T ss_pred EEEe
Confidence 9774
No 19
>cd07130 ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B. Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer.
Probab=100.00 E-value=5e-75 Score=653.89 Aligned_cols=401 Identities=18% Similarity=0.224 Sum_probs=339.7
Q ss_pred HHHhcCCcceeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHh
Q 005047 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 347 (716)
Q Consensus 268 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~ 347 (716)
.+|.+|+.++++...+ .+++++++++|++||+.|+++|.++|.++|++++++|++|+++|++++.+|.++..
T Consensus 17 ~~P~t~~~i~~~~~~~------~~~v~~av~~a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~-- 88 (474)
T cd07130 17 ISPANGEPIARVRQAT------PEDYESTIKAAQEAFKEWRDVPAPKRGEIVRQIGDALRKKKEALGKLVSLEMGKIL-- 88 (474)
T ss_pred ECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCH--
Confidence 5678999999998888 88999999999999999999999999999999999999999999998887765432
Q ss_pred chhHHHHHHhhcCHHHHHHHHHHHHHHhcccccc-cccccccccCCCeEEEEeecceeEEEEEcCC-Cch-hHHHHHHHH
Q 005047 348 GYAKSLVSRLALKPGKISSLAKSIRILADMEEPI-GQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 424 (716)
Q Consensus 348 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~-~P~-~~~~~~~~A 424 (716)
.++. .|+..+++.+++++...+.. +...+. . ..+...+..++|+|||++|+|| ||. ++++++++|
T Consensus 89 --~~a~--------~ev~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~A 156 (474)
T cd07130 89 --PEGL--------GEVQEMIDICDFAVGLSRQLYGLTIPS-E-RPGHRMMEQWNPLGVVGVITAFNFPVAVWGWNAAIA 156 (474)
T ss_pred --HHHH--------HHHHHHHHHHHHHHHhHHHhcCccccC-C-CCCceEEEEEecceeEEEEccCCCHHHHHHHHhhHH
Confidence 1221 24555555666555433221 222211 1 1234457789999999999998 695 567999999
Q ss_pred HHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecCCchHHHhhcCCCCccEEEeecCHHHHHHHHHhc--
Q 005047 425 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST-- 501 (716)
Q Consensus 425 LaaGNtvv~Kps~~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a-- 501 (716)
|++||+||+|||+.||+|+.++++++.+++.++ +|+|++|+|+|+.++++.|..||+||+|+||||+++|+.|++.+
T Consensus 157 LaaGN~VvlKps~~~p~~~~~l~~l~~~~~~~aglP~gv~~~v~g~~~~~~~L~~~~~vd~V~fTGs~~~g~~i~~~aa~ 236 (474)
T cd07130 157 LVCGNVVVWKPSPTTPLTAIAVTKIVARVLEKNGLPGAIASLVCGGADVGEALVKDPRVPLVSFTGSTAVGRQVGQAVAA 236 (474)
T ss_pred HHcCCeEEeeCCccCHHHHHHHHHHHHHHHHhcCCCCCcEEEEeCChhHHHHHhcCCCCCEEEEECchHHHHHHHHHHHh
Confidence 999999999999999999999999999888889 99999999997555788888999999999999999999999876
Q ss_pred -CCCEEEecCCcceEEEcCCCCHHHHHHHHHHhcCCCCC-ccccccceEEEeCccCChhhHHHHHHHHHhcCC-------
Q 005047 502 -KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMVETLLVHKDLACNGALNELVVELQHEGV------- 572 (716)
Q Consensus 502 -~~~~~lElGGk~p~iV~~dADl~~Aa~~iv~~~f~n~g-~C~a~~~rv~V~~~i~dd~f~~~l~~~~~~~~~------- 572 (716)
.+|++||||||||+||++|||+|.|++.+++|+|.|+| .|+|+ +|+|||+++| |+|+++|+++++++.+
T Consensus 237 ~~~~~~lElGGk~p~iV~~dadl~~Aa~~i~~~~~~~~GQ~C~a~-~rv~V~~~i~-d~f~~~l~~~~~~l~~g~p~~~~ 314 (474)
T cd07130 237 RFGRSLLELGGNNAIIVMEDADLDLAVRAVLFAAVGTAGQRCTTT-RRLIVHESIY-DEVLERLKKAYKQVRIGDPLDDG 314 (474)
T ss_pred cCCCEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCC-eEEEEcHhHH-HHHHHHHHHHHhcCCcCCCCCCC
Confidence 38999999999999999999999999999999999987 99999 9999999999 7999999999987531
Q ss_pred ---------------------------EE-ecCccc--cc-cc-c-C----CCCccccccccCceEEEEEeCCHHHHHHH
Q 005047 573 ---------------------------GL-FGGPRA--SK-LL-Q-I----PETRLFHHEYNSMVCTVEIVDDVRAAIDH 615 (716)
Q Consensus 573 ---------------------------~~-~g~~~~--~~-~~-p-v----~~~~~~~eE~FGPVl~v~~~~~~deAi~~ 615 (716)
++ .|+.+. .+ |+ | | ++|++++||+||||++|++|+|+||||++
T Consensus 315 ~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~~~~~~i~~eE~FGPvl~v~~~~~~~eai~~ 394 (474)
T cd07130 315 TLVGPLHTKAAVDNYLAAIEEAKSQGGTVLFGGKVIDGPGNYVEPTIVEGLSDAPIVKEETFAPILYVLKFDTLEEAIAW 394 (474)
T ss_pred CCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCCCeEEccEEEecCCCCHHHhCCCcCCeEEEEEeCCHHHHHHH
Confidence 11 233221 13 33 5 2 34889999999999999999999999999
Q ss_pred HHhcCCCceeEEEccCHHHHHHHHHc--cCcceEEEcCCcC-CCCCCcccCcceeeccccccccccccchhcccEEEEEE
Q 005047 616 IHQHGSAHTDCIVAEDQKVAETFLCQ--VDSAAVFHNASTR-FCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 692 (716)
Q Consensus 616 aN~~~~GL~a~i~t~d~~~a~~~~~~--~~~G~v~vN~~~~-~~~~~p~g~g~~sG~~~~~~~~~g~~gl~~ft~~k~v~ 692 (716)
+|+++|||++||||+|.+++++++++ +++|+|+||.++. ..+.+||||.+.||+| +++|++|+++||+.|+|+
T Consensus 395 aN~~~~gL~a~v~t~d~~~a~~~~~~~~~~~g~v~iN~~~~~~~~~~PfgG~k~SG~G----~~~g~~~~~~f~~~k~~~ 470 (474)
T cd07130 395 NNEVPQGLSSSIFTTDLRNAFRWLGPKGSDCGIVNVNIGTSGAEIGGAFGGEKETGGG----RESGSDAWKQYMRRSTCT 470 (474)
T ss_pred HhCCCCCceEEEEcCCHHHHHHHHhhcCcceEEEEEcCCCCCCCCCCCcCccccccCC----ccchHHHHHHHhheEEEE
Confidence 99999999999999999999999987 9999999998654 3467899999999986 357999999999999988
Q ss_pred Ec
Q 005047 693 RG 694 (716)
Q Consensus 693 ~~ 694 (716)
++
T Consensus 471 ~~ 472 (474)
T cd07130 471 IN 472 (474)
T ss_pred Ee
Confidence 75
No 20
>cd07113 ALDH_PADH_NahF Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like. NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate.
Probab=100.00 E-value=6.4e-75 Score=654.00 Aligned_cols=400 Identities=15% Similarity=0.140 Sum_probs=338.9
Q ss_pred HHHhcCCcceeEEecCCccccchhhHHHHHHHHHHHHHH-HhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Q 005047 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRR-LQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 346 (716)
Q Consensus 268 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~-w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~ 346 (716)
.+|.+|+.++++..++ .+|+++++++|++||+. |+++|.++|.++|++++++|++++++|++++.+|.++..
T Consensus 20 ~~P~tg~~i~~~~~~~------~~~v~~av~~A~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~- 92 (477)
T cd07113 20 TNPATEQVIASVASAT------EADVDAAVASAWRAFVSAWAKTTPAERGRILLRLADLIEQHGEELAQLETLCSGKSI- 92 (477)
T ss_pred eCCCCCCEEEEEcCCC------HHHHHHHHHHHHHHhHhhhccCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHhcCCCH-
Confidence 5678999999998888 88999999999999985 999999999999999999999999999999887765432
Q ss_pred hchhHHHHHHhhcCHHHHHHHHHHHHHHhccccc-ccccccccc---cCCCeEEEEeecceeEEEEEcCC-Cch-hHHHH
Q 005047 347 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTE---LADGLILEKTSCPLGVLLIVFES-RPD-ALVQI 420 (716)
Q Consensus 347 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~---~~~~~~~~~~~~PlGVv~~I~p~-~P~-~~~~~ 420 (716)
.++.. .|+...++.+++++.+.+. .++..+... ...+...+++|+|+|||++|+|| ||. +.+++
T Consensus 93 ---~~a~~-------~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~ 162 (477)
T cd07113 93 ---HLSRA-------FEVGQSANFLRYFAGWATKINGETLAPSIPSMQGERYTAFTRREPVGVVAGIVPWNFSVMIAVWK 162 (477)
T ss_pred ---HHHHH-------HHHHHHHHHHHHHHHHHHHhcCcccccccccccCCCceEEEEEeecceEEEEcCCChHHHHHHHH
Confidence 12211 2566666667766654332 222221100 01123567889999999999998 695 57899
Q ss_pred HHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecCCchHHHhhcCCCCccEEEeecCHHHHHHHHH
Q 005047 421 ASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKE 499 (716)
Q Consensus 421 ~~~ALaaGNtvv~Kps~~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~ 499 (716)
++|||++||+||+|||+.||+++.++++++.+ + ||+|++|+|+|...++..|..||+||+|+||||+++|+.|++
T Consensus 163 i~~ALaaGN~VvlKPs~~tp~~~~~l~~~~~~----aglP~gvv~~v~g~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~ 238 (477)
T cd07113 163 IGAALATGCTIVIKPSEFTPLTLLRVAELAKE----AGIPDGVLNVVNGKGAVGAQLISHPDVAKVSFTGSVATGKKIGR 238 (477)
T ss_pred HHHHHHcCCEEEEECCCCCcHHHHHHHHHHHH----cCcCCCcEEEEecCchHHHHHhcCCCCCEEEEECcHHHHHHHHH
Confidence 99999999999999999999999999999986 7 999999999963338888889999999999999999999998
Q ss_pred hc---CCCEEEecCCcceEEEcCCCCHHHHHHHHHHhcCCCCC-ccccccceEEEeCccCChhhHHHHHHHHHhcCC---
Q 005047 500 ST---KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMVETLLVHKDLACNGALNELVVELQHEGV--- 572 (716)
Q Consensus 500 ~a---~~~~~lElGGk~p~iV~~dADl~~Aa~~iv~~~f~n~g-~C~a~~~rv~V~~~i~dd~f~~~l~~~~~~~~~--- 572 (716)
.+ .+|+++|||||||+||++|||+|.|++.+++|+|.|+| .|+|+ +|+|||+++| |+|+++|+++++++.+
T Consensus 239 ~aa~~~~~~~lElGGkn~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~-~rv~V~~~i~-d~f~~~l~~~~~~~~~g~p 316 (477)
T cd07113 239 QAASDLTRVTLELGGKNAAAFLKDADIDWVVEGLLTAGFLHQGQVCAAP-ERFYVHRSKF-DELVTKLKQALSSFQVGSP 316 (477)
T ss_pred HHHhhcCceEeecCCCCeeEECCCCCHHHHHHHHHHHHHhhCCCCCcCC-cEEEECHHHH-HHHHHHHHHHHHhCCCCCC
Confidence 77 39999999999999999999999999999999999987 99999 9999999999 7999999999877531
Q ss_pred -------------------------------EE-ecCccc--cccc--c-C-----CCCccccccccCceEEEEEeCCHH
Q 005047 573 -------------------------------GL-FGGPRA--SKLL--Q-I-----PETRLFHHEYNSMVCTVEIVDDVR 610 (716)
Q Consensus 573 -------------------------------~~-~g~~~~--~~~~--p-v-----~~~~~~~eE~FGPVl~v~~~~~~d 610 (716)
++ .|+.+. .++| | | ++|++++||+||||++|++|+|+|
T Consensus 317 ~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~l~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~d 396 (477)
T cd07113 317 MDESVMFGPLANQPHFDKVCSYLDDARAEGDEIVRGGEALAGEGYFVQPTLVLARSADSRLMREETFGPVVSFVPYEDEE 396 (477)
T ss_pred CCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCeeEeCEEEecCCCCChHHhCCCCCCeEEEEEeCCHH
Confidence 22 244322 2443 6 2 368999999999999999999999
Q ss_pred HHHHHHHhcCCCceeEEEccCHHHHHHHHHccCcceEEEcCCcCCCCCCcccCcceeeccccccccccccchhcccEEEE
Q 005047 611 AAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRW 690 (716)
Q Consensus 611 eAi~~aN~~~~GL~a~i~t~d~~~a~~~~~~~~~G~v~vN~~~~~~~~~p~g~g~~sG~~~~~~~~~g~~gl~~ft~~k~ 690 (716)
|||+++|+++|||++||||+|.++++++++++++|+|+||.++...+..||||.+.||+| +++|++|+++||+.|+
T Consensus 397 eai~~~n~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G----~~~g~~~l~~~t~~k~ 472 (477)
T cd07113 397 ELIQLINDTPFGLTASVWTNNLSKALRYIPRIEAGTVWVNMHTFLDPAVPFGGMKQSGIG----REFGSAFIDDYTELKS 472 (477)
T ss_pred HHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccCC----ccchHHHHHHhhceEE
Confidence 999999999999999999999999999999999999999987666677899999999986 3569999999999999
Q ss_pred EEEc
Q 005047 691 ILRG 694 (716)
Q Consensus 691 v~~~ 694 (716)
|+++
T Consensus 473 v~~~ 476 (477)
T cd07113 473 VMIR 476 (477)
T ss_pred EEEe
Confidence 9763
No 21
>cd07559 ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like. Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences.
Probab=100.00 E-value=7.6e-75 Score=652.86 Aligned_cols=398 Identities=19% Similarity=0.176 Sum_probs=342.1
Q ss_pred HHHHhcCCcceeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Q 005047 267 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 346 (716)
Q Consensus 267 l~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~ 346 (716)
+.+|.+|+.++++..++ .+|+++++++|++||++|+++|.++|.++|++++++|++|+++|++++++|.++..
T Consensus 20 v~~P~t~~~~~~~~~~~------~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~- 92 (480)
T cd07559 20 NYNPVNGKVLCEIPRST------AEDVDLAVDAAHEAFKTWGKTSVAERANILNKIADRIEENLELLAVAETLDNGKPI- 92 (480)
T ss_pred eeCCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCH-
Confidence 35678899999998888 88999999999999999999999999999999999999999999999887765432
Q ss_pred hchhHHHHHHhhcCHHHHHHHHHHHHHHhccccc-ccccccccccCCCeEEEEeecceeEEEEEcCC-Cch-hHHHHHHH
Q 005047 347 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 423 (716)
Q Consensus 347 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~-~P~-~~~~~~~~ 423 (716)
.++. ..++...++.+++++...+. .+...+. ..+...+++++|+|||++|+|| ||. +.+++++|
T Consensus 93 ---~~a~-------~~ev~~~~~~~~~~a~~~~~~~~~~~~~---~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~i~~ 159 (480)
T cd07559 93 ---RETL-------AADIPLAIDHFRYFAGVIRAQEGSLSEI---DEDTLSYHFHEPLGVVGQIIPWNFPLLMAAWKLAP 159 (480)
T ss_pred ---HHHH-------HHHHHHHHHHHHHHHHHHHHhcCccccC---CCCceeEEEEeccceEEEECCCchHHHHHHHHHHH
Confidence 1222 12566677777776654322 2222211 2344567889999999999998 695 56899999
Q ss_pred HHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccccCcCceEEecC-CchHHHhhcCCCCccEEEeecCHHHHHHHHHhcC
Q 005047 424 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDTVGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK 502 (716)
Q Consensus 424 ALaaGNtvv~Kps~~tp~t~~~l~~l~~~al~~alP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a~ 502 (716)
||++||+||+|||+.||+++..+++++.+ ++|+|++|+|+| +.++++.|..||+||+|+||||+.+|+.|++.+.
T Consensus 160 ALaaGN~VV~KPs~~tp~~~~~l~~l~~~----~lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~aa 235 (480)
T cd07559 160 ALAAGNTVVLKPASQTPLSILVLMELIGD----LLPKGVVNVVTGFGSEAGKPLASHPRIAKLAFTGSTTVGRLIMQYAA 235 (480)
T ss_pred HHHcCCEEEEECchhhhHHHHHHHHHHHH----hCCcCeEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHh
Confidence 99999999999999999999999999986 499999999996 5678899999999999999999999999998873
Q ss_pred ---CCEEEecCCcceEEEcCCC-----CHHHHHHHHHHhcCCCCC-ccccccceEEEeCccCChhhHHHHHHHHHhcCC-
Q 005047 503 ---IPVLGHADGICHVYVDKSA-----NLDVAKNIVIDAKIDYPA-ACNAMVETLLVHKDLACNGALNELVVELQHEGV- 572 (716)
Q Consensus 503 ---~~~~lElGGk~p~iV~~dA-----Dl~~Aa~~iv~~~f~n~g-~C~a~~~rv~V~~~i~dd~f~~~l~~~~~~~~~- 572 (716)
||++||||||||+||++|| |+|.|++.+++++|.|+| .|+|+ +|+|||+++| |+|+++|+++++++++
T Consensus 236 ~~~~p~~lElGGk~p~iV~~dA~~~~~Dl~~aa~~i~~~~~~~~GQ~C~a~-~rv~V~~~i~-d~f~~~l~~~~~~l~~G 313 (480)
T cd07559 236 ENLIPVTLELGGKSPNIFFDDAMDADDDFDDKAEEGQLGFAFNQGEVCTCP-SRALVQESIY-DEFIERAVERFEAIKVG 313 (480)
T ss_pred ccCCcEEeccCCCCeEEEcCCccccccCHHHHHHHHHHHHHhhCCCCCCCC-eEEEEcHHHH-HHHHHHHHHHHHhCCCC
Confidence 8999999999999999999 999999999999999987 99999 9999999999 7999999999887632
Q ss_pred ---------------------------------EE-ecCccc------ccc-c-c-C-----CCCccccccccCceEEEE
Q 005047 573 ---------------------------------GL-FGGPRA------SKL-L-Q-I-----PETRLFHHEYNSMVCTVE 604 (716)
Q Consensus 573 ---------------------------------~~-~g~~~~------~~~-~-p-v-----~~~~~~~eE~FGPVl~v~ 604 (716)
++ .|+.+. .++ + | | ++|++++||+||||++|+
T Consensus 314 ~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~ 393 (480)
T cd07559 314 NPLDPETMMGAQVSKDQLEKILSYVDIGKEEGAEVLTGGERLTLGGLDKGYFYEPTLIKGGNNDMRIFQEEIFGPVLAVI 393 (480)
T ss_pred CCCCCCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCccccCCCCcEECeEEEeCCCCCCcHHhcCCcCceEEEE
Confidence 12 233221 133 3 5 2 368899999999999999
Q ss_pred EeCCHHHHHHHHHhcCCCceeEEEccCHHHHHHHHHccCcceEEEcCCcCCCCCCcccCcceeeccccccccccccchhc
Q 005047 605 IVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEG 684 (716)
Q Consensus 605 ~~~~~deAi~~aN~~~~GL~a~i~t~d~~~a~~~~~~~~~G~v~vN~~~~~~~~~p~g~g~~sG~~~~~~~~~g~~gl~~ 684 (716)
+|+|+||||+++|+++|||++||||+|.+++.++++++++|+|+||.+....+..||||.+.||+| +++|++|+++
T Consensus 394 ~~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~a~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G----~~~g~~~~~~ 469 (480)
T cd07559 394 TFKDEEEAIAIANDTEYGLGGGVWTRDINRALRVARGIQTGRVWVNCYHQYPAHAPFGGYKKSGIG----RETHKMMLDH 469 (480)
T ss_pred eeCCHHHHHHHHhCCCCCCeEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCCccCcCC----ccChHHHHHH
Confidence 999999999999999999999999999999999999999999999987666678999999999986 3569999999
Q ss_pred ccEEEEEEEc
Q 005047 685 LLTTRWILRG 694 (716)
Q Consensus 685 ft~~k~v~~~ 694 (716)
||+.|+|+++
T Consensus 470 ~~~~k~v~~~ 479 (480)
T cd07559 470 YQQTKNILVS 479 (480)
T ss_pred hhceEEEEEe
Confidence 9999999764
No 22
>cd07140 ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids.
Probab=100.00 E-value=8.4e-75 Score=651.76 Aligned_cols=400 Identities=16% Similarity=0.193 Sum_probs=339.7
Q ss_pred HHHhcCCcceeEEecCCccccchhhHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Q 005047 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSR--RLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQ 345 (716)
Q Consensus 268 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~ 345 (716)
.+|.+|+.++++..++ .+|+++|+++|++||+ .|+++|.++|.++|++++++|++|+++|++++.+|.++..
T Consensus 26 ~nP~tg~~i~~~~~~~------~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~ 99 (486)
T cd07140 26 INPTDGSVICKVSLAT------VEDVDRAVAAAKEAFENGEWGKMNARDRGRLMYRLADLMEEHQEELATIESLDSGAVY 99 (486)
T ss_pred ECCCCCCEEEEEeCCC------HHHHHHHHHHHHHhcCCCchhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcH
Confidence 5688999999999988 8899999999999998 5999999999999999999999999999999887765432
Q ss_pred HhchhHHHHHHhhcCHHHHHHHHHHHHHHhccccc-ccccccccc-cCCCeEEEEeecceeEEEEEcCC-Cch-hHHHHH
Q 005047 346 EAGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTE-LADGLILEKTSCPLGVLLIVFES-RPD-ALVQIA 421 (716)
Q Consensus 346 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~-~~~~~~~~~~~~PlGVv~~I~p~-~P~-~~~~~~ 421 (716)
.++. ..++...++.+++++.+.+. .+...+... .+.+...+++|+|+|||++|+|| ||. +.++++
T Consensus 100 ----~~a~-------~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~r~P~GVv~~I~PwN~P~~~~~~~i 168 (486)
T cd07140 100 ----TLAL-------KTHVGMSIQTFRYFAGWCDKIQGKTIPINQARPNRNLTLTKREPIGVCGIVIPWNYPLMMLAWKM 168 (486)
T ss_pred ----HHHH-------HHHHHHHHHHHHHHHHHHHHhcCccccccccCCCCceEEEEeeccceEEEEcCCchHHHHHHHHH
Confidence 1221 12556666666666644322 222222110 01223467889999999999998 696 578999
Q ss_pred HHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CchHHHhhcCCCCccEEEeecCHHHHHHHHH
Q 005047 422 SLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKE 499 (716)
Q Consensus 422 ~~ALaaGNtvv~Kps~~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~ 499 (716)
+|||++||+||+|||+.||+++..+++++.+ + +|+|++|+|+| +.++++.|..||+|++|+||||+++||.|++
T Consensus 169 ~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~----aglP~gv~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~ 244 (486)
T cd07140 169 AACLAAGNTVVLKPAQVTPLTALKFAELTVK----AGFPKGVINILPGSGSLVGQRLSDHPDVRKLGFTGSTPIGKHIMK 244 (486)
T ss_pred HHHHHhCCEEEEECCccCcHHHHHHHHHHHH----cCcCCCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHH
Confidence 9999999999999999999999999999986 7 99999999996 6678888989999999999999999999998
Q ss_pred hcC----CCEEEecCCcceEEEcCCCCHHHHHHHHHHhcCCCCC-ccccccceEEEeCccCChhhHHHHHHHHHhcCC--
Q 005047 500 STK----IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMVETLLVHKDLACNGALNELVVELQHEGV-- 572 (716)
Q Consensus 500 ~a~----~~~~lElGGk~p~iV~~dADl~~Aa~~iv~~~f~n~g-~C~a~~~rv~V~~~i~dd~f~~~l~~~~~~~~~-- 572 (716)
.+. +|+++|||||||+||++|||++.|++.+++++|.|+| .|+++ +|+|||+++| |+|+++|+++++++.+
T Consensus 245 ~aa~~~l~~v~lElGGk~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~-~rl~V~~~i~-~~f~~~l~~~~~~l~~g~ 322 (486)
T cd07140 245 SCAVSNLKKVSLELGGKSPLIIFADCDMDKAVRMGMSSVFFNKGENCIAA-GRLFVEESIH-DEFVRRVVEEVKKMKIGD 322 (486)
T ss_pred HHHhcCCCeEEEEcCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCCCC-cEEEEcHHHH-HHHHHHHHHHHHhCCccC
Confidence 763 7999999999999999999999999999999999986 99999 9999999999 7999999999987631
Q ss_pred --------------------------------EE-ecCccc--cc-cc-c-C-----CCCccccccccCceEEEEEeC--
Q 005047 573 --------------------------------GL-FGGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVD-- 607 (716)
Q Consensus 573 --------------------------------~~-~g~~~~--~~-~~-p-v-----~~~~~~~eE~FGPVl~v~~~~-- 607 (716)
++ +|+.+. .+ |+ | | ++|++++||+||||++|++|+
T Consensus 323 p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~ 402 (486)
T cd07140 323 PLDRSTDHGPQNHKAHLDKLVEYCERGVKEGATLVYGGKQVDRPGFFFEPTVFTDVEDHMFIAKEESFGPIMIISKFDDG 402 (486)
T ss_pred CCCCCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCeeECCEEEeCCCCCChhhhCCCCCCeEEEEEcCCC
Confidence 12 233221 23 33 5 2 468999999999999999998
Q ss_pred CHHHHHHHHHhcCCCceeEEEccCHHHHHHHHHccCcceEEEcCCcCCCCCCcccCcceeeccccccccccccchhcccE
Q 005047 608 DVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLT 687 (716)
Q Consensus 608 ~~deAi~~aN~~~~GL~a~i~t~d~~~a~~~~~~~~~G~v~vN~~~~~~~~~p~g~g~~sG~~~~~~~~~g~~gl~~ft~ 687 (716)
|+||||+++|+++|||++||||+|.++++++++++++|.||||++....+..||||.+.||+| +++|++|+++||+
T Consensus 403 ~~~eai~~aN~~~~gL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G----~~~G~~~l~~ft~ 478 (486)
T cd07140 403 DVDGVLQRANDTEYGLASGVFTKDINKALYVSDKLEAGTVFVNTYNKTDVAAPFGGFKQSGFG----KDLGEEALNEYLK 478 (486)
T ss_pred CHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccCcCC----CcchHHHHHHhhc
Confidence 699999999999999999999999999999999999999999997766667899999999986 3569999999999
Q ss_pred EEEEEEc
Q 005047 688 TRWILRG 694 (716)
Q Consensus 688 ~k~v~~~ 694 (716)
.|+|+++
T Consensus 479 ~k~v~~~ 485 (486)
T cd07140 479 TKTVTIE 485 (486)
T ss_pred EEEEEEe
Confidence 9999763
No 23
>cd07117 ALDH_StaphAldA1 Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like. Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD.
Probab=100.00 E-value=1.4e-74 Score=649.47 Aligned_cols=397 Identities=17% Similarity=0.180 Sum_probs=341.7
Q ss_pred HHHhcCCcceeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHh
Q 005047 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 347 (716)
Q Consensus 268 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~ 347 (716)
.+|.+++.++++..++ .+|+++++++|++||+.|+++|.++|.++|++++++|++|+++|++++.+|+++..
T Consensus 21 ~nP~t~~~i~~~~~~~------~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~-- 92 (475)
T cd07117 21 YNPANGETLSEITDAT------DADVDRAVKAAQEAFKTWRKTTVAERANILNKIADIIDENKELLAMVETLDNGKPI-- 92 (475)
T ss_pred ECCCCCCEEEEEcCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHcCCCH--
Confidence 5678999999998888 88999999999999999999999999999999999999999999998877665432
Q ss_pred chhHHHHHHhhcCHHHHHHHHHHHHHHhcccc-cccccccccccCCCeEEEEeecceeEEEEEcCC-Cch-hHHHHHHHH
Q 005047 348 GYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 424 (716)
Q Consensus 348 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~-~P~-~~~~~~~~A 424 (716)
.++. ..|+..+++.+++++...+ ..++..+. ..+...+++|+|+|||++|+|| ||. +++++++||
T Consensus 93 --~~a~-------~~ev~~~i~~l~~~a~~~~~~~~~~~~~---~~~~~~~~~~~P~GVV~~I~PwN~Pl~~~~~~i~~A 160 (475)
T cd07117 93 --RETR-------AVDIPLAADHFRYFAGVIRAEEGSANMI---DEDTLSIVLREPIGVVGQIIPWNFPFLMAAWKLAPA 160 (475)
T ss_pred --HHHH-------HHHHHHHHHHHHHHHHHHHHhcCccccc---CCCceeEEEEeecceEEEECCCccHHHHHHHHHHHH
Confidence 1221 1267777788887775432 22322211 1233567889999999999999 695 578999999
Q ss_pred HHhCCEEEEeCCcchHHHHHHHHHHHHHhcccccCcCceEEecC-CchHHHhhcCCCCccEEEeecCHHHHHHHHHhc--
Q 005047 425 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDTVGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST-- 501 (716)
Q Consensus 425 LaaGNtvv~Kps~~tp~t~~~l~~l~~~al~~alP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a-- 501 (716)
|++||+||+|||+.||+++..+++++.+ ++|+|++|+|+| +.++++.|..||+||+|+||||+++|+.|++++
T Consensus 161 L~aGN~VvlKPs~~~p~~~~~l~~~~~~----~lP~g~~~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~ 236 (475)
T cd07117 161 LAAGNTVVIKPSSTTSLSLLELAKIIQD----VLPKGVVNIVTGKGSKSGEYLLNHPGLDKLAFTGSTEVGRDVAIAAAK 236 (475)
T ss_pred HHcCCEEEEECCccCcHHHHHHHHHHHH----hCCcCcEEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhc
Confidence 9999999999999999999999999985 499999999996 567888888999999999999999999999877
Q ss_pred -CCCEEEecCCcceEEEcCCCCHHHHHHHHHHhcCCCCC-ccccccceEEEeCccCChhhHHHHHHHHHhcCC-------
Q 005047 502 -KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMVETLLVHKDLACNGALNELVVELQHEGV------- 572 (716)
Q Consensus 502 -~~~~~lElGGk~p~iV~~dADl~~Aa~~iv~~~f~n~g-~C~a~~~rv~V~~~i~dd~f~~~l~~~~~~~~~------- 572 (716)
.+|+++|||||||+||++|||++.|++.+++|+|.|+| .|+|+ +|+|||+++| |+|+++|+++++++.+
T Consensus 237 ~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~-~rv~V~~~i~-d~f~~~l~~~~~~l~~g~p~~~~ 314 (475)
T cd07117 237 KLIPATLELGGKSANIIFDDANWDKALEGAQLGILFNQGQVCCAG-SRIFVQEGIY-DEFVAKLKEKFENVKVGNPLDPD 314 (475)
T ss_pred cCCcEEEeCCCCCeEEECCCCChHHHHHHHHHHHhhccCCCCCCC-eEEEEeHHHH-HHHHHHHHHHHHhccCCCCCCCC
Confidence 38999999999999999999999999999999999987 99999 9999999999 7999999999887631
Q ss_pred ---------------------------EE-ecCccc------cc-cc-c-C-----CCCccccccccCceEEEEEeCCHH
Q 005047 573 ---------------------------GL-FGGPRA------SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVR 610 (716)
Q Consensus 573 ---------------------------~~-~g~~~~------~~-~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~d 610 (716)
++ .|+... .+ |+ | | +++++++||+||||++|++|+|+|
T Consensus 315 ~~~gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~ 394 (475)
T cd07117 315 TQMGAQVNKDQLDKILSYVDIAKEEGAKILTGGHRLTENGLDKGFFIEPTLIVNVTNDMRVAQEEIFGPVATVIKFKTED 394 (475)
T ss_pred CcccCcCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCccccCCCCeEEeeEEeecCCCCChhhhCCCcCCeEEEEEECCHH
Confidence 12 233221 13 33 5 2 468999999999999999999999
Q ss_pred HHHHHHHhcCCCceeEEEccCHHHHHHHHHccCcceEEEcCCcCCCCCCcccCcceeeccccccccccccchhcccEEEE
Q 005047 611 AAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRW 690 (716)
Q Consensus 611 eAi~~aN~~~~GL~a~i~t~d~~~a~~~~~~~~~G~v~vN~~~~~~~~~p~g~g~~sG~~~~~~~~~g~~gl~~ft~~k~ 690 (716)
|||+++|+++|||++||||+|.+++.++++++++|+|+||++....+.+||||.+.||+| +++|++|+++||+.|+
T Consensus 395 eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G----~~~g~~~~~~ft~~k~ 470 (475)
T cd07117 395 EVIDMANDSEYGLGGGVFTKDINRALRVARAVETGRVWVNTYNQIPAGAPFGGYKKSGIG----RETHKSMLDAYTQMKN 470 (475)
T ss_pred HHHHHHhCCCcCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccCcCC----CCchHHHHHHHhCeEE
Confidence 999999999999999999999999999999999999999997766778899999999986 3579999999999999
Q ss_pred EEEc
Q 005047 691 ILRG 694 (716)
Q Consensus 691 v~~~ 694 (716)
|++.
T Consensus 471 v~~~ 474 (475)
T cd07117 471 IYID 474 (475)
T ss_pred EEEe
Confidence 8763
No 24
>cd07086 ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins. ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105).
Probab=100.00 E-value=1.7e-74 Score=650.64 Aligned_cols=401 Identities=19% Similarity=0.231 Sum_probs=343.9
Q ss_pred HHHhcCCcceeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHh
Q 005047 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 347 (716)
Q Consensus 268 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~ 347 (716)
.+|.||+.++++..++ .+++++++++|++||+.|+++|.++|.++|++++++|++++++|++++.+|.+++.
T Consensus 18 ~~P~tg~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~-- 89 (478)
T cd07086 18 RNPANGEPIARVFPAS------PEDVEAAVAAAREAFKEWRKVPAPRRGEIVRQIGEALRKKKEALGRLVSLEMGKIL-- 89 (478)
T ss_pred ECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCH--
Confidence 5688999999999888 88999999999999999999999999999999999999999999999877665432
Q ss_pred chhHHHHHHhhcCHHHHHHHHHHHHHHhccccc-ccccccccccCCCeEEEEeecceeEEEEEcCC-Cch-hHHHHHHHH
Q 005047 348 GYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 424 (716)
Q Consensus 348 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~-~P~-~~~~~~~~A 424 (716)
.++ ..++..+++.+++++...+. .+...+. ...+...+++|+|+|||++|+|| ||. ++++++++|
T Consensus 90 --~~a--------~~ev~~~~~~~~~~a~~~~~~~g~~~~~--~~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~~~~A 157 (478)
T cd07086 90 --PEG--------LGEVQEMIDICDYAVGLSRMLYGLTIPS--ERPGHRLMEQWNPLGVVGVITAFNFPVAVPGWNAAIA 157 (478)
T ss_pred --HHH--------HHHHHHHHHHHHHHHHHHHHhcCccccc--CCCCceEEEEEecceeEEEECCCCcHHHHHHHHHHHH
Confidence 121 23566666666666543322 2222221 11233567889999999999998 796 678999999
Q ss_pred HHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecCCchHHHhhcCCCCccEEEeecCHHHHHHHHHhc--
Q 005047 425 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST-- 501 (716)
Q Consensus 425 LaaGNtvv~Kps~~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a-- 501 (716)
|++||+||+|||+.||+|+..++++++++|+++ +|+|++|+|+|...++++|..||+||+|+||||+++|+.|++.+
T Consensus 158 LaaGN~VIlKps~~~p~~~~~l~~~~~~al~~~glP~gvv~~v~g~~~~~~~L~~~~~vd~v~fTGs~~~g~~i~~~aa~ 237 (478)
T cd07086 158 LVCGNTVVWKPSETTPLTAIAVTKILAEVLEKNGLPPGVVNLVTGGGDGGELLVHDPRVPLVSFTGSTEVGRRVGETVAR 237 (478)
T ss_pred HHcCCeEEEECCCcchHHHHHHHHHHHHhhhccCCCccceEEEecCchhHHHHhcCCCCCEEEEECcHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999 99999999996444889999999999999999999999998876
Q ss_pred -CCCEEEecCCcceEEEcCCCCHHHHHHHHHHhcCCCCC-ccccccceEEEeCccCChhhHHHHHHHHHhcCC-------
Q 005047 502 -KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMVETLLVHKDLACNGALNELVVELQHEGV------- 572 (716)
Q Consensus 502 -~~~~~lElGGk~p~iV~~dADl~~Aa~~iv~~~f~n~g-~C~a~~~rv~V~~~i~dd~f~~~l~~~~~~~~~------- 572 (716)
.+|+++|||||||+||++|||++.|++.+++|+|.|+| .|+|+ +|+|||+++| |+|+++|+++++++.+
T Consensus 238 ~~~~~~lElGG~~p~iV~~dAdl~~Aa~~i~~~~~~~~GQ~C~a~-~rv~V~~~i~-d~f~~~l~~~~~~~~~g~p~~~~ 315 (478)
T cd07086 238 RFGRVLLELGGNNAIIVMDDADLDLAVRAVLFAAVGTAGQRCTTT-RRLIVHESVY-DEFLERLVKAYKQVRIGDPLDEG 315 (478)
T ss_pred cCCcEEeecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCCCcCC-eEEEEcHHHH-HHHHHHHHHHHHhCCcCCCCCCC
Confidence 38999999999999999999999999999999999987 99999 9999999999 7999999999887531
Q ss_pred ---------------------------EEe-cCccc----cc-cc-c-C-----CCCccccccccCceEEEEEeCCHHHH
Q 005047 573 ---------------------------GLF-GGPRA----SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAA 612 (716)
Q Consensus 573 ---------------------------~~~-g~~~~----~~-~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deA 612 (716)
++. |+.+. .+ |+ | | +++++++||+||||++|++|+|+|||
T Consensus 316 ~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPVl~v~~~~~~dea 395 (478)
T cd07086 316 TLVGPLINQAAVEKYLNAIEIAKSQGGTVLTGGKRIDGGEPGNYVEPTIVTGVTDDARIVQEETFAPILYVIKFDSLEEA 395 (478)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCeEEccEEecCCCCCChhhcCCCcCCEEEEEEeCCHHHH
Confidence 222 44321 13 33 5 2 35899999999999999999999999
Q ss_pred HHHHHhcCCCceeEEEccCHHHHHHHHHc--cCcceEEEcCCcCC-CCCCcccCcceeeccccccccccccchhcccEEE
Q 005047 613 IDHIHQHGSAHTDCIVAEDQKVAETFLCQ--VDSAAVFHNASTRF-CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTR 689 (716)
Q Consensus 613 i~~aN~~~~GL~a~i~t~d~~~a~~~~~~--~~~G~v~vN~~~~~-~~~~p~g~g~~sG~~~~~~~~~g~~gl~~ft~~k 689 (716)
|+++|+++|||++||||+|.+++++++++ +++|+|+||+++.. .+.+||||.+.||+| +++|.+|+++|++.|
T Consensus 396 i~~~n~~~~gL~a~v~t~d~~~a~~~~~~~~~~~G~v~iN~~~~~~~~~~PfgG~~~SG~G----~~~g~~~~~~f~~~k 471 (478)
T cd07086 396 IAINNDVPQGLSSSIFTEDLREAFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKETGGG----RESGSDAWKQYMRRS 471 (478)
T ss_pred HHHHhCCCCcceEEEEcCCHHHHHHHHhcCcccceeEEECCCCCCCCCCCCCCCcccccCC----ccchHHHHHHhhceE
Confidence 99999999999999999999999999999 99999999987544 467899999999986 346899999999999
Q ss_pred EEEEc
Q 005047 690 WILRG 694 (716)
Q Consensus 690 ~v~~~ 694 (716)
+|+++
T Consensus 472 ~i~~~ 476 (478)
T cd07086 472 TCTIN 476 (478)
T ss_pred EEEEe
Confidence 99875
No 25
>cd07116 ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like. Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression.
Probab=100.00 E-value=2.7e-74 Score=649.19 Aligned_cols=397 Identities=18% Similarity=0.163 Sum_probs=338.6
Q ss_pred HHHHhcCCcceeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Q 005047 267 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 346 (716)
Q Consensus 267 l~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~ 346 (716)
+.+|.||+.++++..++ .+|+++|+++|++||+.|+++|.++|.++|++++++|++|+++|+.+++.|.++..
T Consensus 20 v~nP~tg~~i~~~~~~~------~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~- 92 (479)
T cd07116 20 NITPVTGKVFCEVPRST------AEDIELALDAAHAAKEAWGKTSVAERANILNKIADRMEANLEMLAVAETWDNGKPV- 92 (479)
T ss_pred eECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH-
Confidence 35688999999998888 89999999999999999999999999999999999999999999998887654331
Q ss_pred hchhHHHHHHhhcCHHHHHHHHHHHHHHhccccc-ccccccccccCCCeEEEEeecceeEEEEEcCC-Cch-hHHHHHHH
Q 005047 347 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 423 (716)
Q Consensus 347 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~-~P~-~~~~~~~~ 423 (716)
.++. ..|+..+++.+++++...+. .+...+. ..+...+++++|+|||++|+|| ||. +.+++++|
T Consensus 93 ---~~a~-------~~ev~~~~~~~~~~a~~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ 159 (479)
T cd07116 93 ---RETL-------AADIPLAIDHFRYFAGCIRAQEGSISEI---DENTVAYHFHEPLGVVGQIIPWNFPLLMATWKLAP 159 (479)
T ss_pred ---HHHH-------HHHHHHHHHHHHHHHHhHHHcCCeeecC---CCCceEEEEEeccceEEEECCCchHHHHHHHHHHH
Confidence 1221 13677778888877754432 2222111 1234567889999999999998 696 46799999
Q ss_pred HHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccccCcCceEEecC-CchHHHhhcCCCCccEEEeecCHHHHHHHHHhc-
Q 005047 424 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDTVGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST- 501 (716)
Q Consensus 424 ALaaGNtvv~Kps~~tp~t~~~l~~l~~~al~~alP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a- 501 (716)
||++||+||+|||+.||+++..+++++++ +||+|++|+|+| +.+++..|..||+||+|+||||+++|+.|++.+
T Consensus 160 ALaaGN~VV~KPs~~tp~~~~~l~~l~~~----alP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa 235 (479)
T cd07116 160 ALAAGNCVVLKPAEQTPASILVLMELIGD----LLPPGVVNVVNGFGLEAGKPLASSKRIAKVAFTGETTTGRLIMQYAS 235 (479)
T ss_pred HHHcCCEEEEECCCCChHHHHHHHHHHHH----HCCcCcEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHH
Confidence 99999999999999999999999999986 499999999996 567888888999999999999999999999877
Q ss_pred --CCCEEEecCCcceEEEcCC------CCHHHHHHHHHHhcCCCCC-ccccccceEEEeCccCChhhHHHHHHHHHhcC-
Q 005047 502 --KIPVLGHADGICHVYVDKS------ANLDVAKNIVIDAKIDYPA-ACNAMVETLLVHKDLACNGALNELVVELQHEG- 571 (716)
Q Consensus 502 --~~~~~lElGGk~p~iV~~d------ADl~~Aa~~iv~~~f~n~g-~C~a~~~rv~V~~~i~dd~f~~~l~~~~~~~~- 571 (716)
.+|++||||||||+||++| ||+|.|++.++++.| |+| .|+|+ +|+|||+++| |+|+++|+++++++.
T Consensus 236 ~~~~p~~lElGGk~p~iV~~da~~~~~adl~~A~~~i~~~~~-~~GQ~C~a~-~rv~V~~~i~-d~f~~~l~~~~~~l~~ 312 (479)
T cd07116 236 ENIIPVTLELGGKSPNIFFADVMDADDAFFDKALEGFVMFAL-NQGEVCTCP-SRALIQESIY-DRFMERALERVKAIKQ 312 (479)
T ss_pred cCCCeEEEECCCCCeEEEecCcccccccCHHHHHHHHHHHHh-cCCCCCCCC-eEEEEcHHHH-HHHHHHHHHHHHhcCC
Confidence 3899999999999999998 799999999999765 555 99999 9999999999 799999999988752
Q ss_pred ---------------------------------CEE-ecCccc------ccc-c-c-C----CCCccccccccCceEEEE
Q 005047 572 ---------------------------------VGL-FGGPRA------SKL-L-Q-I----PETRLFHHEYNSMVCTVE 604 (716)
Q Consensus 572 ---------------------------------~~~-~g~~~~------~~~-~-p-v----~~~~~~~eE~FGPVl~v~ 604 (716)
+++ .|+... .++ + | | ++|++++||+||||++|+
T Consensus 313 G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~eE~FGPVl~v~ 392 (479)
T cd07116 313 GNPLDTETMIGAQASLEQLEKILSYIDIGKEEGAEVLTGGERNELGGLLGGGYYVPTTFKGGNKMRIFQEEIFGPVLAVT 392 (479)
T ss_pred CCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCCCeeecCeEEccCCCChhhhcCCcCceEEEE
Confidence 122 243221 133 3 5 2 468999999999999999
Q ss_pred EeCCHHHHHHHHHhcCCCceeEEEccCHHHHHHHHHccCcceEEEcCCcCCCCCCcccCcceeeccccccccccccchhc
Q 005047 605 IVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEG 684 (716)
Q Consensus 605 ~~~~~deAi~~aN~~~~GL~a~i~t~d~~~a~~~~~~~~~G~v~vN~~~~~~~~~p~g~g~~sG~~~~~~~~~g~~gl~~ 684 (716)
+|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++....+..||||.+.||+| +++|++|+++
T Consensus 393 ~~~~~~eai~~aN~~~~gLsa~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G----~~~g~~~l~~ 468 (479)
T cd07116 393 TFKDEEEALEIANDTLYGLGAGVWTRDGNTAYRMGRGIQAGRVWTNCYHLYPAHAAFGGYKQSGIG----RENHKMMLDH 468 (479)
T ss_pred EeCCHHHHHHHHhCCcccceEEEEcCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCcCCCccCcCC----ccChHHHHHH
Confidence 999999999999999999999999999999999999999999999987766778899999999986 3579999999
Q ss_pred ccEEEEEEEc
Q 005047 685 LLTTRWILRG 694 (716)
Q Consensus 685 ft~~k~v~~~ 694 (716)
||+.|+|+++
T Consensus 469 ~~~~k~~~~~ 478 (479)
T cd07116 469 YQQTKNLLVS 478 (479)
T ss_pred hhceEEEEEe
Confidence 9999999763
No 26
>TIGR03216 OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehydrogenase. Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation.
Probab=100.00 E-value=2.4e-74 Score=650.06 Aligned_cols=401 Identities=17% Similarity=0.185 Sum_probs=340.0
Q ss_pred HHHHhcCCcceeEEecCCccccchhhHHHHHHHHHHHHHH-HhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Q 005047 267 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRR-LQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQ 345 (716)
Q Consensus 267 l~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~-w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~ 345 (716)
..+|++|+.++++..++ .+++++++++|++||+. |+++|.++|.++|++++++|++|.+||++++++|++++.
T Consensus 18 ~~~P~tg~~i~~~~~~~------~~~v~~av~~A~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~ 91 (481)
T TIGR03216 18 NINPVDGRVIARVHEAG------AAEVDAAVAAARAALKGPWGKMTVAERADLLYAVADEIERRFDDFLAAEVADTGKPR 91 (481)
T ss_pred eECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHhHhhHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcH
Confidence 35678999999998888 89999999999999997 999999999999999999999999999999987765442
Q ss_pred HhchhHHHHHHhhcCHHHHHHHHHHHHHHhccccc-ccccccccc-cCCCeEEEEeecceeEEEEEcCC-Cch-hHHHHH
Q 005047 346 EAGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTE-LADGLILEKTSCPLGVLLIVFES-RPD-ALVQIA 421 (716)
Q Consensus 346 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~-~~~~~~~~~~~~PlGVv~~I~p~-~P~-~~~~~~ 421 (716)
. ++. ..++..+++.+++++...+. .+...+... ...+...+.+|+|+|||++|+|| ||. +.++++
T Consensus 92 ~----~~~-------~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~Pl~~~~~~~ 160 (481)
T TIGR03216 92 S----LAS-------HLDIPRGAANFRVFADVVKNAPTECFEMATPDGKGALNYAVRKPLGVVGVISPWNLPLLLMTWKV 160 (481)
T ss_pred H----HHh-------HHHHHHHHHHHHHHHHHHHHhcCccccccCCCCCCceeEEEEeccceEEEECCCCcHHHHHHHHH
Confidence 1 111 12455566666666543321 122211100 01133567889999999999998 695 578999
Q ss_pred HHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-C-chHHHhhcCCCCccEEEeecCHHHHHHHH
Q 005047 422 SLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-R-EEIPDLLKLDDVIDLVIPRGSNKLVSQIK 498 (716)
Q Consensus 422 ~~ALaaGNtvv~Kps~~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~-~~~~~~l~~~~~v~~v~fTGs~~~g~~i~ 498 (716)
+|||++||+||+|||+.||+|+.++++++.+ + +|+|++|+|+| + ++++++|..||+||+|+||||+.+|+.|+
T Consensus 161 ~~ALaaGN~vvlKPs~~tp~t~~~l~~l~~~----aglP~g~~~~v~g~~~~~~~~~l~~~~~vd~v~fTGS~~~G~~i~ 236 (481)
T TIGR03216 161 GPALACGNTVVVKPSEETPGTATLLGEVMNA----VGVPKGVYNVVHGFGPDSAGEFLTRHPGVDAITFTGETRTGSAIM 236 (481)
T ss_pred HHHHHcCCEEEEECCccchHHHHHHHHHHHH----cCCCcCceEEEecCChhHHHHHHhcCCCCCEEEEECCHHHHHHHH
Confidence 9999999999999999999999999999986 8 99999999996 4 35889999999999999999999999999
Q ss_pred HhcC---CCEEEecCCcceEEEcCCCCHHHHHHHHHHhcCCCCC-ccccccceEEEeCccCChhhHHHHHHHHHhcCC--
Q 005047 499 ESTK---IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMVETLLVHKDLACNGALNELVVELQHEGV-- 572 (716)
Q Consensus 499 ~~a~---~~~~lElGGk~p~iV~~dADl~~Aa~~iv~~~f~n~g-~C~a~~~rv~V~~~i~dd~f~~~l~~~~~~~~~-- 572 (716)
+++. ||++||||||||+||++|||+|.|++.+++|+|.|+| .|+++ +|+|||+++| |+|+++|+++++++++
T Consensus 237 ~~aa~~~~~~~lElgG~n~~iV~~dadl~~aa~~i~~~~f~~~GQ~C~a~-~rv~V~~~i~-~~f~~~l~~~~~~~~~g~ 314 (481)
T TIGR03216 237 KAAADGVKPVSFELGGKNAAIVFADCDFDAAVAGILRSAFLNTGQVCLGT-ERVYVERPIF-DRFVAALKARAESLKIGV 314 (481)
T ss_pred HHHhcCCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCC-eEEEEcHHHH-HHHHHHHHHHHHhcCCCC
Confidence 8873 8999999999999999999999999999999999976 99999 9999999999 7999999999987632
Q ss_pred --------------------------------EE-ecCccc-------ccc-c-c-C-----CCCccccccccCceEEEE
Q 005047 573 --------------------------------GL-FGGPRA-------SKL-L-Q-I-----PETRLFHHEYNSMVCTVE 604 (716)
Q Consensus 573 --------------------------------~~-~g~~~~-------~~~-~-p-v-----~~~~~~~eE~FGPVl~v~ 604 (716)
++ .|+... .++ + | | ++|++++||+||||++|+
T Consensus 315 p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FgPvl~V~ 394 (481)
T TIGR03216 315 PDDPATNMGPLISAEHRDKVLSYYALAVEEGATVVTGGGVPDFGDALAGGAWVQPTIWTGLPDSARVVTEEIFGPCCHIA 394 (481)
T ss_pred CCCCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcccccccCCCCceEccEEEeCCCCCCHHHhCCCCCceEEEE
Confidence 11 233221 233 3 5 2 468999999999999999
Q ss_pred EeCCHHHHHHHHHhcCCCceeEEEccCHHHHHHHHHccCcceEEEcCCcCCCCCCcccCcceeeccccccccccccchhc
Q 005047 605 IVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEG 684 (716)
Q Consensus 605 ~~~~~deAi~~aN~~~~GL~a~i~t~d~~~a~~~~~~~~~G~v~vN~~~~~~~~~p~g~g~~sG~~~~~~~~~g~~gl~~ 684 (716)
+|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+.....+..||||.+.||+| +++|++|+++
T Consensus 395 ~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G----~~~g~~~l~~ 470 (481)
T TIGR03216 395 PFDSEEEVIALANDTPYGLAASVWTEDLSRAHRVARQMEVGIVWVNSWFLRDLRTPFGGSKLSGIG----REGGVHSLEF 470 (481)
T ss_pred EeCCHHHHHHHHhCCCccceEEEECCCHHHHHHHHHhcCccEEEECCCCCCCCCCCcCCcccCcCC----cCchHHHHHH
Confidence 999999999999999999999999999999999999999999999987766677899999999986 3569999999
Q ss_pred ccEEEEEEEc
Q 005047 685 LLTTRWILRG 694 (716)
Q Consensus 685 ft~~k~v~~~ 694 (716)
||+.|+|+++
T Consensus 471 f~~~k~v~~~ 480 (481)
T TIGR03216 471 YTELTNVCIK 480 (481)
T ss_pred hhceEEEEEe
Confidence 9999999763
No 27
>PRK13252 betaine aldehyde dehydrogenase; Provisional
Probab=100.00 E-value=3.1e-74 Score=650.20 Aligned_cols=398 Identities=16% Similarity=0.174 Sum_probs=340.5
Q ss_pred HHHhcCCcceeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHh
Q 005047 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 347 (716)
Q Consensus 268 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~ 347 (716)
.+|.+|+.++++..++ .+|+++++++|++||+.|+++|.++|.++|++++++|++|+++|++++.+|++++.
T Consensus 27 ~nP~tg~~i~~~~~~~------~~dv~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~-- 98 (488)
T PRK13252 27 INPATGEVLATVQAAT------PADVEAAVASAKQGQKIWAAMTAMERSRILRRAVDILRERNDELAALETLDTGKPI-- 98 (488)
T ss_pred ECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCH--
Confidence 5678999999999888 89999999999999999999999999999999999999999999999887765432
Q ss_pred chhHHHHHHhhcCHHHHHHHHHHHHHHhccccc-ccccccccccCCCeEEEEeecceeEEEEEcCC-Cch-hHHHHHHHH
Q 005047 348 GYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 424 (716)
Q Consensus 348 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~-~P~-~~~~~~~~A 424 (716)
.++. ..++...++.++++++..+. .|...+. ..+...+++|+|+|||++|+|| ||. +.+++++||
T Consensus 99 --~~a~-------~~ev~~~~~~l~~~~~~~~~~~g~~~~~---~~~~~~~~~~~PlGVv~~I~p~N~P~~~~~~~~~~A 166 (488)
T PRK13252 99 --QETS-------VVDIVTGADVLEYYAGLAPALEGEQIPL---RGGSFVYTRREPLGVCAGIGAWNYPIQIACWKSAPA 166 (488)
T ss_pred --HHHH-------HHHHHHHHHHHHHHHHHHHHhcCceecc---CCCceEEEEEeeeeEEEEECCCchHHHHHHHHHHHH
Confidence 1221 12455666667766654432 2322221 1234567889999999999998 695 578999999
Q ss_pred HHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecCCchHHHhhcCCCCccEEEeecCHHHHHHHHHhcC-
Q 005047 425 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK- 502 (716)
Q Consensus 425 LaaGNtvv~Kps~~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a~- 502 (716)
|++||+||+|||+.||+|+.++++++++ + +|+|+||+|+|...+++.|..||+||+|+||||+++|+.|++++.
T Consensus 167 LaaGN~Vv~Kps~~~p~t~~~l~~~~~~----aglP~g~v~~v~g~~~~~~~L~~~~~vd~V~fTGS~~~g~~i~~~aa~ 242 (488)
T PRK13252 167 LAAGNAMIFKPSEVTPLTALKLAEIYTE----AGLPDGVFNVVQGDGRVGAWLTEHPDIAKVSFTGGVPTGKKVMAAAAA 242 (488)
T ss_pred HhcCCeEEEeCCccCcHHHHHHHHHHHH----cCcCcccEEEEecCcHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhh
Confidence 9999999999999999999999999986 7 999999999964448888889999999999999999999998773
Q ss_pred --CCEEEecCCcceEEEcCCCCHHHHHHHHHHhcCCCCC-ccccccceEEEeCccCChhhHHHHHHHHHhcC--------
Q 005047 503 --IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMVETLLVHKDLACNGALNELVVELQHEG-------- 571 (716)
Q Consensus 503 --~~~~lElGGk~p~iV~~dADl~~Aa~~iv~~~f~n~g-~C~a~~~rv~V~~~i~dd~f~~~l~~~~~~~~-------- 571 (716)
+|++||||||||+||++|||++.|++.+++++|.|+| .|+|. +|+|||+++| |+|+++|+++++++.
T Consensus 243 ~l~~~~lElgG~~p~iV~~dAdl~~A~~~i~~~~~~~~GQ~C~a~-~rv~V~~~i~-d~f~~~l~~~~~~~~~g~p~~~~ 320 (488)
T PRK13252 243 SLKEVTMELGGKSPLIVFDDADLDRAADIAMLANFYSSGQVCTNG-TRVFVQKSIK-AAFEARLLERVERIRIGDPMDPA 320 (488)
T ss_pred cCCcEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhhcCCCCCCC-eEEEEcHHHH-HHHHHHHHHHHHhcCCCCCCCCC
Confidence 8999999999999999999999999999999999976 99999 9999999999 799999999988752
Q ss_pred --------------------------CEE-ecCccc------cc-cc-c-C-----CCCccccccccCceEEEEEeCCHH
Q 005047 572 --------------------------VGL-FGGPRA------SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVR 610 (716)
Q Consensus 572 --------------------------~~~-~g~~~~------~~-~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~d 610 (716)
.++ .|+.+. .+ |+ | | +++++++||+||||++|++|+|+|
T Consensus 321 ~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~~~ 400 (488)
T PRK13252 321 TNFGPLVSFAHRDKVLGYIEKGKAEGARLLCGGERLTEGGFANGAFVAPTVFTDCTDDMTIVREEIFGPVMSVLTFDDED 400 (488)
T ss_pred CcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCeEEccEEeccCCCCChHhhCCCCCceEEEEeeCCHH
Confidence 122 233221 13 33 5 2 368999999999999999999999
Q ss_pred HHHHHHHhcCCCceeEEEccCHHHHHHHHHccCcceEEEcCCcCCCCCCcccCcceeeccccccccccccchhcccEEEE
Q 005047 611 AAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRW 690 (716)
Q Consensus 611 eAi~~aN~~~~GL~a~i~t~d~~~a~~~~~~~~~G~v~vN~~~~~~~~~p~g~g~~sG~~~~~~~~~g~~gl~~ft~~k~ 690 (716)
|||+++|+++|||++||||+|.+++.++++++++|+|+||+.....+..||||.+.||+| +++|++|+++||+.|+
T Consensus 401 eai~~~n~~~~gL~a~I~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G----~~~g~~~~~~ft~~k~ 476 (488)
T PRK13252 401 EVIARANDTEYGLAAGVFTADLSRAHRVIHQLEAGICWINTWGESPAEMPVGGYKQSGIG----RENGIATLEHYTQIKS 476 (488)
T ss_pred HHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhcCccEEEECCCCCCCCCCCCCCCccCcCC----cCChHHHHHHhcceEE
Confidence 999999999999999999999999999999999999999986655667899999999986 3569999999999999
Q ss_pred EEEcC
Q 005047 691 ILRGN 695 (716)
Q Consensus 691 v~~~~ 695 (716)
|++..
T Consensus 477 i~~~~ 481 (488)
T PRK13252 477 VQVEM 481 (488)
T ss_pred EEEeC
Confidence 98753
No 28
>cd07142 ALDH_F2BC Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like. Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde.
Probab=100.00 E-value=2e-74 Score=649.75 Aligned_cols=395 Identities=18% Similarity=0.197 Sum_probs=339.1
Q ss_pred HHHhcCCcceeEEecCCccccchhhHHHHHHHHHHHHHH--HhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Q 005047 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRR--LQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQ 345 (716)
Q Consensus 268 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~--w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~ 345 (716)
.+|.||+.++++..++ .+|+++++++|++||+. |++++.++|.++|++++++|++|+++|++++++|++++.
T Consensus 24 ~~P~t~~~i~~v~~~~------~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~ 97 (476)
T cd07142 24 IDPRNGEVIAHVAEGD------AEDVDRAVKAARKAFDEGPWPRMTGYERSRILLRFADLLEKHADELAALETWDNGKPY 97 (476)
T ss_pred ECCCCCCEEEEEcCCC------HHHHHHHHHHHHHhcCCCchhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCH
Confidence 5678999999998888 89999999999999985 999999999999999999999999999999887765442
Q ss_pred HhchhHHHHHHhhcCHHHHHHHHHHHHHHhccccc-ccccccccccCCCeEEEEeecceeEEEEEcCC-Cch-hHHHHHH
Q 005047 346 EAGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIAS 422 (716)
Q Consensus 346 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~-~P~-~~~~~~~ 422 (716)
. ++. ..|+..+++.+++++.+.+. .|...+. ..+...+++|+|+|||++|+|| ||. +.+++++
T Consensus 98 ~----~a~-------~~ev~~~~~~l~~~a~~~~~~~g~~~~~---~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~i~ 163 (476)
T cd07142 98 E----QAR-------YAEVPLAARLFRYYAGWADKIHGMTLPA---DGPHHVYTLHEPIGVVGQIIPWNFPLLMFAWKVG 163 (476)
T ss_pred H----HHH-------HHHHHHHHHHHHHHHHHHHHhcCccccc---CCCceEEEEEeceeeEEEECCCccHHHHHHHHHH
Confidence 1 221 12566677777777655432 2332221 1223467889999999999998 696 4679999
Q ss_pred HHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CchHHHhhcCCCCccEEEeecCHHHHHHHHHh
Q 005047 423 LAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKES 500 (716)
Q Consensus 423 ~ALaaGNtvv~Kps~~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~ 500 (716)
|||++||+||+|||+.||+++.++++++.+ + +|+|++|+|+| ++++++.|..||+||+|+||||+++|+.|++.
T Consensus 164 ~ALaaGN~VV~KPs~~tp~~~~~l~~~~~~----aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~v~fTGs~~~G~~v~~~ 239 (476)
T cd07142 164 PALACGNTIVLKPAEQTPLSALLAAKLAAE----AGLPDGVLNIVTGFGPTAGAAIASHMDVDKVAFTGSTEVGKIIMQL 239 (476)
T ss_pred HHHHcCCEEEEECCCcccHHHHHHHHHHHH----cCcCcccEEEEeCCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHH
Confidence 999999999999999999999999999986 8 99999999996 56688889999999999999999999999987
Q ss_pred cC----CCEEEecCCcceEEEcCCCCHHHHHHHHHHhcCCCCC-ccccccceEEEeCccCChhhHHHHHHHHHhcC----
Q 005047 501 TK----IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMVETLLVHKDLACNGALNELVVELQHEG---- 571 (716)
Q Consensus 501 a~----~~~~lElGGk~p~iV~~dADl~~Aa~~iv~~~f~n~g-~C~a~~~rv~V~~~i~dd~f~~~l~~~~~~~~---- 571 (716)
+. +|+++|||||||+||++|||+|+|++.+++|+|.|+| .|+|+ +|||||+++| |+|+++|+++++++.
T Consensus 240 aa~~~~~~v~lElgGk~p~iV~~dADl~~Aa~~i~~~~f~~aGQ~C~a~-~rv~V~~~i~-d~f~~~l~~~~~~~~~G~p 317 (476)
T cd07142 240 AAKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAG-SRTFVHESIY-DEFVEKAKARALKRVVGDP 317 (476)
T ss_pred HHHcCCCeEEEECCCCCeeEECCCCCHHHHHHHHHHHHhcCCCCCCCCC-eeEEEeHHHH-HHHHHHHHHHHHhcCCCCC
Confidence 63 7999999999999999999999999999999999976 99999 9999999999 799999999887642
Q ss_pred ------------------------------CEE-ecCccc--cc-cc-c-C-----CCCccccccccCceEEEEEeCCHH
Q 005047 572 ------------------------------VGL-FGGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVR 610 (716)
Q Consensus 572 ------------------------------~~~-~g~~~~--~~-~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~d 610 (716)
+++ .|+... .+ ++ | | +++++++||+||||++|++|+|+|
T Consensus 318 ~~~~~~~Gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~ 397 (476)
T cd07142 318 FRKGVEQGPQVDKEQFEKILSYIEHGKEEGATLITGGDRIGSKGYYIQPTIFSDVKDDMKIARDEIFGPVQSILKFKTVD 397 (476)
T ss_pred CCCCCcCCcCcCHHHHHHHHHHHHHHHhCCCEEEecCCcCCCCCeeEccEEeecCCCCChhhhCCccCceEEEEeeCCHH
Confidence 122 233221 23 33 5 2 368899999999999999999999
Q ss_pred HHHHHHHhcCCCceeEEEccCHHHHHHHHHccCcceEEEcCCcCCCCCCcccCcceeeccccccccccccchhcccEEEE
Q 005047 611 AAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRW 690 (716)
Q Consensus 611 eAi~~aN~~~~GL~a~i~t~d~~~a~~~~~~~~~G~v~vN~~~~~~~~~p~g~g~~sG~~~~~~~~~g~~gl~~ft~~k~ 690 (716)
|||+++|+++|||++||||+|.+++.++++++++|+|+||......+..||||.+.||+| +++|++|+++||+.|+
T Consensus 398 eai~~~n~~~~gL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G----~~~g~~~~~~ft~~k~ 473 (476)
T cd07142 398 EVIKRANNSKYGLAAGVFSKNIDTANTLSRALKAGTVWVNCYDVFDASIPFGGYKMSGIG----REKGIYALNNYLQVKA 473 (476)
T ss_pred HHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccCcCC----ccchHHHHHHhhheeE
Confidence 999999999999999999999999999999999999999987766778999999999986 3569999999999999
Q ss_pred EE
Q 005047 691 IL 692 (716)
Q Consensus 691 v~ 692 (716)
|+
T Consensus 474 v~ 475 (476)
T cd07142 474 VV 475 (476)
T ss_pred Ee
Confidence 85
No 29
>cd07107 ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like. Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD.
Probab=100.00 E-value=5e-74 Score=644.09 Aligned_cols=396 Identities=17% Similarity=0.173 Sum_probs=337.6
Q ss_pred HHHhcCCcceeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHh
Q 005047 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 347 (716)
Q Consensus 268 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~ 347 (716)
.+|.+|+.++++..++ .+|+++++++|++||+.|+++|.++|.++|++++++|+++.++|++++.+|++++.
T Consensus 2 ~~p~tg~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~-- 73 (456)
T cd07107 2 INPATGQVLARVPAAS------AADVDRAVAAARAAFPEWRATTPLERARMLRELATRLREHAEELALIDALDCGNPV-- 73 (456)
T ss_pred cCCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCH--
Confidence 3578899999998888 88999999999999999999999999999999999999999999998887765432
Q ss_pred chhHHHHHHhhcCHHHHHHHHHHHHHHhcccc-cccccccccccCCCeEEEEeecceeEEEEEcCC-Cch-hHHHHHHHH
Q 005047 348 GYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 424 (716)
Q Consensus 348 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~-~P~-~~~~~~~~A 424 (716)
.++ ..++...++.+++++...+ ..+...+. ..+...+++|+|+|||++|+|| ||. +.+++++||
T Consensus 74 --~~a--------~~ev~~~~~~l~~~a~~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~A 140 (456)
T cd07107 74 --SAM--------LGDVMVAAALLDYFAGLVTELKGETIPV---GGRNLHYTLREPYGVVARIVAFNHPLMFAAAKIAAP 140 (456)
T ss_pred --HHH--------HHHHHHHHHHHHHHHHHHHHhCCccccC---CCCceEEEEEecceEEEEECCcccHHHHHHHHHhHH
Confidence 122 2355556666666554332 12222221 1234567889999999999999 796 567999999
Q ss_pred HHhCCEEEEeCCcchHHHHHHHHHHHHHhcccccCcCceEEecC-CchHHHhhcCCCCccEEEeecCHHHHHHHHHhc--
Q 005047 425 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDTVGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST-- 501 (716)
Q Consensus 425 LaaGNtvv~Kps~~tp~t~~~l~~l~~~al~~alP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a-- 501 (716)
|++||+||+|||+.||+++.++++++.+ +||+|+||+|+| ++++++.|..||++++|+||||+++|+.|++++
T Consensus 141 LaaGN~VV~Kps~~~p~~~~~l~~~~~~----~lP~gvv~~v~g~~~~~~~~l~~~~~i~~v~fTGs~~~g~~i~~~aa~ 216 (456)
T cd07107 141 LAAGNTVVVKPPEQAPLSALRLAELARE----VLPPGVFNILPGDGATAGAALVRHPDVKRIALIGSVPTGRAIMRAAAE 216 (456)
T ss_pred HHcCCEEEEeCCCCChHHHHHHHHHHHH----hCCcCcEEEEeCCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhc
Confidence 9999999999999999999999999985 499999999996 556788888999999999999999999999887
Q ss_pred -CCCEEEecCCcceEEEcCCCCHHHHHHHHHHhc-CCCCC-ccccccceEEEeCccCChhhHHHHHHHHHhcCC------
Q 005047 502 -KIPVLGHADGICHVYVDKSANLDVAKNIVIDAK-IDYPA-ACNAMVETLLVHKDLACNGALNELVVELQHEGV------ 572 (716)
Q Consensus 502 -~~~~~lElGGk~p~iV~~dADl~~Aa~~iv~~~-f~n~g-~C~a~~~rv~V~~~i~dd~f~~~l~~~~~~~~~------ 572 (716)
.+|+++|||||||+||++|||+|.|++.+++|+ |.|+| +|+|+ +|+|||+++| |+|+++|+++++++..
T Consensus 217 ~~~~~~lElgG~~p~iV~~dadl~~Aa~~i~~~~~f~~~GQ~C~a~-~rv~V~~~i~-d~f~~~l~~~~~~l~~g~p~~~ 294 (456)
T cd07107 217 GIKHVTLELGGKNALIVFPDADPEAAADAAVAGMNFTWCGQSCGST-SRLFVHESIY-DEVLARVVERVAAIKVGDPTDP 294 (456)
T ss_pred CCCeEEEECCCCCeEEECCCCCHHHHHHHHHHhchhhcCCCCCcCC-cEEEEcHHHH-HHHHHHHHHHHHhCCCCCCCCC
Confidence 389999999999999999999999999999995 88776 99999 9999999999 7999999999886521
Q ss_pred ----------------------------EE-ecCccc------ccc-c-c-C-----CCCccccccccCceEEEEEeCCH
Q 005047 573 ----------------------------GL-FGGPRA------SKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVDDV 609 (716)
Q Consensus 573 ----------------------------~~-~g~~~~------~~~-~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~ 609 (716)
++ +||... .++ + | | ++|++++||+||||++|++|+|+
T Consensus 295 ~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPvl~i~~~~~~ 374 (456)
T cd07107 295 ATTMGPLVSRQQYDRVMHYIDSAKREGARLVTGGGRPEGPALEGGFYVEPTVFADVTPGMRIAREEIFGPVLSVLRWRDE 374 (456)
T ss_pred CCCcCcccCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCceECCEEEECCCCCChhhhCCCCCceEEEEeeCCH
Confidence 12 233221 133 3 5 2 46899999999999999999999
Q ss_pred HHHHHHHHhcCCCceeEEEccCHHHHHHHHHccCcceEEEcCCcCCCCCCcccCcceeeccccccccccccchhcccEEE
Q 005047 610 RAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTR 689 (716)
Q Consensus 610 deAi~~aN~~~~GL~a~i~t~d~~~a~~~~~~~~~G~v~vN~~~~~~~~~p~g~g~~sG~~~~~~~~~g~~gl~~ft~~k 689 (716)
||||+++|+++|||++||||+|.++++++++++++|.|+||++....+.+||||.++||+| +++|++|+++||+.|
T Consensus 375 ~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfgG~k~SG~G----~~~g~~~~~~~~~~k 450 (456)
T cd07107 375 AEMVAQANGVEYGLTAAIWTNDISQAHRTARRVEAGYVWINGSSRHFLGAPFGGVKNSGIG----REECLEELLSYTQEK 450 (456)
T ss_pred HHHHHHHhCCCCcceEEEECCCHHHHHHHHHhcCcCEEEECCCCCCCCCCCcCCcccccCC----cCchHHHHHHhhceE
Confidence 9999999999999999999999999999999999999999998877778999999999986 356999999999999
Q ss_pred EEEEc
Q 005047 690 WILRG 694 (716)
Q Consensus 690 ~v~~~ 694 (716)
+|+++
T Consensus 451 ~v~~~ 455 (456)
T cd07107 451 NVNVR 455 (456)
T ss_pred EEEEe
Confidence 99763
No 30
>cd07148 ALDH_RL0313 Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1. Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD.
Probab=100.00 E-value=6.2e-74 Score=642.30 Aligned_cols=398 Identities=18% Similarity=0.198 Sum_probs=332.2
Q ss_pred HHHhcCCcceeEEecCCccccchhhHHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Q 005047 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRL-QALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 346 (716)
Q Consensus 268 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w-~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~ 346 (716)
.+|++|+.++++...+ .+|+++++++|++||+.| +.+|.++|.++|++++++|+++.++|++++.+|.+++.
T Consensus 4 ~~P~t~~~i~~~~~~~------~~~v~~av~~A~~a~~~~~~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~- 76 (455)
T cd07148 4 VNPFDLKPIGEVPTVD------WAAIDKALDTAHALFLDRNNWLPAHERIAILERLADLMEERADELALLIAREGGKPL- 76 (455)
T ss_pred cCCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCH-
Confidence 4678999999999988 899999999999999984 67999999999999999999999999998887765432
Q ss_pred hchhHHHHHHhhcCHHHHHHHHHHHHHHhccccc-cccccccc--ccCCCeEEEEeecceeEEEEEcCC-Cch-hHHHHH
Q 005047 347 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRT--ELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIA 421 (716)
Q Consensus 347 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~--~~~~~~~~~~~~~PlGVv~~I~p~-~P~-~~~~~~ 421 (716)
.++. .|+...++.+++++...+. .+...+.. ....+...+++|+|+|||++|+|| ||. +.++++
T Consensus 77 ---~~a~--------~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~ 145 (455)
T cd07148 77 ---VDAK--------VEVTRAIDGVELAADELGQLGGREIPMGLTPASAGRIAFTTREPIGVVVAISAFNHPLNLIVHQV 145 (455)
T ss_pred ---HHHH--------HHHHHHHHHHHHHHHHHHHhcCcccccccccCCCCceEEEEEecceEEEEECCCCcHHHHHHHHH
Confidence 1222 1334444444444322111 11111100 001234567889999999999998 685 678999
Q ss_pred HHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecCCchHHHhhcCCCCccEEEeecCHHHHHHHHHh
Q 005047 422 SLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKES 500 (716)
Q Consensus 422 ~~ALaaGNtvv~Kps~~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~ 500 (716)
++||++||+||+|||+.||+++.++++++++ + ||+|++|+|+++.+.++.|..||+||+|+||||+++|+.|+++
T Consensus 146 ~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~----aGlP~gvv~~v~g~~~~~~~L~~~~~v~~v~fTGs~~~G~~i~~~ 221 (455)
T cd07148 146 APAIAAGCPVIVKPALATPLSCLAFVDLLHE----AGLPEGWCQAVPCENAVAEKLVTDPRVAFFSFIGSARVGWMLRSK 221 (455)
T ss_pred HHHHHcCCEEEeeCCCcccHHHHHHHHHHHH----cCCCcCcEEEEeCChHHHHHHhcCCCCCEEEEECCHHHHHHHHHH
Confidence 9999999999999999999999999999986 7 9999999999655578888899999999999999999999887
Q ss_pred cC--CCEEEecCCcceEEEcCCCCHHHHHHHHHHhcCCCCC-ccccccceEEEeCccCChhhHHHHHHHHHhcCC-----
Q 005047 501 TK--IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMVETLLVHKDLACNGALNELVVELQHEGV----- 572 (716)
Q Consensus 501 a~--~~~~lElGGk~p~iV~~dADl~~Aa~~iv~~~f~n~g-~C~a~~~rv~V~~~i~dd~f~~~l~~~~~~~~~----- 572 (716)
+. +|+++|||||||+||++|||+|.|++.+++|+|.|+| .|+|+ +|+|||+++| |+|+++|+++++++.+
T Consensus 222 aa~~~~~~lElGG~~p~iV~~dADl~~aa~~i~~~~f~~~GQ~C~a~-~rv~V~~~i~-d~f~~~l~~~~~~~~~g~p~~ 299 (455)
T cd07148 222 LAPGTRCALEHGGAAPVIVDRSADLDAMIPPLVKGGFYHAGQVCVSV-QRVFVPAEIA-DDFAQRLAAAAEKLVVGDPTD 299 (455)
T ss_pred hhcCCcEEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCccCC-eEEEEcHhHH-HHHHHHHHHHHhcCCCCCCCC
Confidence 63 8999999999999999999999999999999999976 99999 9999999999 7999999999887632
Q ss_pred -----------------------------EE-ecCccccc-cc-c-C-----CCCccccccccCceEEEEEeCCHHHHHH
Q 005047 573 -----------------------------GL-FGGPRASK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAID 614 (716)
Q Consensus 573 -----------------------------~~-~g~~~~~~-~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi~ 614 (716)
++ .|+.+..+ ++ | | +++++++||+||||++|++|+|+||||+
T Consensus 300 ~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~ 379 (455)
T cd07148 300 PDTEVGPLIRPREVDRVEEWVNEAVAAGARLLCGGKRLSDTTYAPTVLLDPPRDAKVSTQEIFGPVVCVYSYDDLDEAIA 379 (455)
T ss_pred CCCcCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCeEcCEEEeCCCCCCHHHhCCCcCCeEEEEecCCHHHHHH
Confidence 12 13332222 23 5 2 3688999999999999999999999999
Q ss_pred HHHhcCCCceeEEEccCHHHHHHHHHccCcceEEEcCCcCCC-CCCcccCcceeeccccccccccccchhcccEEEEEEE
Q 005047 615 HIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFC-DGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILR 693 (716)
Q Consensus 615 ~aN~~~~GL~a~i~t~d~~~a~~~~~~~~~G~v~vN~~~~~~-~~~p~g~g~~sG~~~~~~~~~g~~gl~~ft~~k~v~~ 693 (716)
++|+++|||++||||+|.+++.+|++++++|+|+||+++... +..||||.+.||+| +++|++|+++||+.|++++
T Consensus 380 ~~n~~~~gL~a~i~t~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~PfgG~k~SG~G----~~~g~~~~~~~~~~k~~~~ 455 (455)
T cd07148 380 QANSLPVAFQAAVFTKDLDVALKAVRRLDATAVMVNDHTAFRVDWMPFAGRRQSGYG----TGGIPYTMHDMTQEKMAVI 455 (455)
T ss_pred HHhCCCCCceEEEEcCCHHHHHHHHHHcCcCeEEECCCCCCCCCCCCCCcchhcccC----CCchHHHHHHhhceeEEeC
Confidence 999999999999999999999999999999999999876443 45799999999986 3569999999999999853
No 31
>cd07085 ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2. Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD.
Probab=100.00 E-value=1.3e-73 Score=644.08 Aligned_cols=400 Identities=18% Similarity=0.186 Sum_probs=339.9
Q ss_pred HHHHhcCCcceeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Q 005047 267 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 346 (716)
Q Consensus 267 l~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~ 346 (716)
+.+|.+|+.++++..++ .+|+++++++|++||+.|+++|.++|.++|++++++|++|+++|++++++|.++...
T Consensus 20 ~~~P~t~~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~ 93 (478)
T cd07085 20 VYNPATGEVIARVPLAT------AEEVDAAVAAAKAAFPAWSATPVLKRQQVMFKFRQLLEENLDELARLITLEHGKTLA 93 (478)
T ss_pred eeCCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHH
Confidence 35678999999998888 889999999999999999999999999999999999999999999998877654421
Q ss_pred hchhHHHHHHhhcCHHHHHHHHHHHHHHhcccc-cccccccccccCCCeEEEEeecceeEEEEEcCC-Cch-hHHHHHHH
Q 005047 347 AGYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 423 (716)
Q Consensus 347 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~-~P~-~~~~~~~~ 423 (716)
++ ..|+...++.+++++...+ ..++..+.. ..+...+.+++|+|||++|+|| ||. +..++++|
T Consensus 94 ----~a--------~~ev~~~~~~~~~~~~~~~~~~g~~~~~~--~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ 159 (478)
T cd07085 94 ----DA--------RGDVLRGLEVVEFACSIPHLLKGEYLENV--ARGIDTYSYRQPLGVVAGITPFNFPAMIPLWMFPM 159 (478)
T ss_pred ----HH--------HHHHHHHHHHHHHHHHHHHHhCCeecccC--CCCceeEEEEecceEEEEECCCChHHHHHHHHHHH
Confidence 22 2356666666666654332 223322211 1234568899999999999998 695 56899999
Q ss_pred HHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecCCchHHHhhcCCCCccEEEeecCHHHHHHHHHhcC
Q 005047 424 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK 502 (716)
Q Consensus 424 ALaaGNtvv~Kps~~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a~ 502 (716)
||++||+||+|||+.||+++.++++++.+ + +|+|++|+|+|..+.++.|..||+||+|+||||+++|+.|++++.
T Consensus 160 ALaaGN~VvlKps~~tp~~~~~l~~~l~~----aGlP~gvv~~v~g~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~aa 235 (478)
T cd07085 160 AIACGNTFVLKPSERVPGAAMRLAELLQE----AGLPDGVLNVVHGGKEAVNALLDHPDIKAVSFVGSTPVGEYIYERAA 235 (478)
T ss_pred HHhcCCEEEEECCCcCcHHHHHHHHHHHH----hCCCCCcEEEEecCHHHHHHHhcCCCcCEEEEECCHHHHHHHHHHHh
Confidence 99999999999999999999999999986 7 999999999975556778888999999999999999999988774
Q ss_pred ---CCEEEecCCcceEEEcCCCCHHHHHHHHHHhcCCCCC-ccccccceEEEeCccCChhhHHHHHHHHHhcCC------
Q 005047 503 ---IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMVETLLVHKDLACNGALNELVVELQHEGV------ 572 (716)
Q Consensus 503 ---~~~~lElGGk~p~iV~~dADl~~Aa~~iv~~~f~n~g-~C~a~~~rv~V~~~i~dd~f~~~l~~~~~~~~~------ 572 (716)
+|+++|||||||+||++|||+|.|++.+++|+|.|+| .|+++ +|||||+++| |+|+++|+++++++++
T Consensus 236 ~~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~-~rv~V~~~i~-~~f~~~L~~~~~~l~~G~p~~~ 313 (478)
T cd07085 236 ANGKRVQALGGAKNHAVVMPDADLEQTANALVGAAFGAAGQRCMAL-SVAVAVGDEA-DEWIPKLVERAKKLKVGAGDDP 313 (478)
T ss_pred hcCCcEEecCCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCC-eEEEEeHHHH-HHHHHHHHHHHHhCCCCCCCCC
Confidence 8999999999999999999999999999999999987 99999 9999999999 7999999999887632
Q ss_pred ----------------------------EE-ecCcc------cccc-c-c-C-----CCCccccccccCceEEEEEeCCH
Q 005047 573 ----------------------------GL-FGGPR------ASKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVDDV 609 (716)
Q Consensus 573 ----------------------------~~-~g~~~------~~~~-~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~ 609 (716)
++ .|+.. ..++ + | | +++++++||+||||++|++|+|+
T Consensus 314 ~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~l~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~ 393 (478)
T cd07085 314 GADMGPVISPAAKERIEGLIESGVEEGAKLVLDGRGVKVPGYENGNFVGPTILDNVTPDMKIYKEEIFGPVLSIVRVDTL 393 (478)
T ss_pred CCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCcCCCCeEEcCEEEecCCCCChhhhCcCcCCeEEEEEeCCH
Confidence 22 23321 1233 3 6 2 36899999999999999999999
Q ss_pred HHHHHHHHhcCCCceeEEEccCHHHHHHHHHccCcceEEEcCCcCCC-CCCcccCcceeeccccccccccccchhcccEE
Q 005047 610 RAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFC-DGARFGLGAEVGISTSRIHARGPVGVEGLLTT 688 (716)
Q Consensus 610 deAi~~aN~~~~GL~a~i~t~d~~~a~~~~~~~~~G~v~vN~~~~~~-~~~p~g~g~~sG~~~~~~~~~g~~gl~~ft~~ 688 (716)
||||+++|+++|||++||||+|.++++++++++++|+||||++.... +.+||||.+.||+| +++++|++|+++||+.
T Consensus 394 deai~~~N~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfgG~k~SG~G--~~~~~g~~~~~~~~~~ 471 (478)
T cd07085 394 DEAIAIINANPYGNGAAIFTRSGAAARKFQREVDAGMVGINVPIPVPLAFFSFGGWKGSFFG--DLHFYGKDGVRFYTQT 471 (478)
T ss_pred HHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCCCCcccccCC--CCcCChHHHHHHhcce
Confidence 99999999999999999999999999999999999999999875443 56899999999986 3235699999999999
Q ss_pred EEEEEc
Q 005047 689 RWILRG 694 (716)
Q Consensus 689 k~v~~~ 694 (716)
|+|+++
T Consensus 472 k~v~~~ 477 (478)
T cd07085 472 KTVTSR 477 (478)
T ss_pred EEEEEe
Confidence 999764
No 32
>cd07106 ALDH_AldA-AAD23400 Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like. Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD.
Probab=100.00 E-value=1.4e-73 Score=639.23 Aligned_cols=393 Identities=19% Similarity=0.188 Sum_probs=340.1
Q ss_pred HHHhcCCcceeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHh
Q 005047 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 347 (716)
Q Consensus 268 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~ 347 (716)
.+|.||+.++++..++ .+|+++++++|++||+.|++++.++|.++|++++++|++|+++|++++.+|.+++.
T Consensus 2 ~~P~tg~~~~~~~~~~------~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~-- 73 (446)
T cd07106 2 INPATGEVFASAPVAS------EAQLDQAVAAAKAAFPGWSATPLEERRAALLAIADAIEANAEELARLLTLEQGKPL-- 73 (446)
T ss_pred cCCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH--
Confidence 3578999999998888 88999999999999999999999999999999999999999999999876654332
Q ss_pred chhHHHHHHhhcCHHHHHHHHHHHHHHhcccccccccccccccCCCeEEEEeecceeEEEEEcCC-Cch-hHHHHHHHHH
Q 005047 348 GYAKSLVSRLALKPGKISSLAKSIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAI 425 (716)
Q Consensus 348 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~-~P~-~~~~~~~~AL 425 (716)
.++ ..|+..+++.+++++....+ +...+. ..+...+.+++|+|||++|+|| ||. +.++++++||
T Consensus 74 --~~a--------~~ev~~~~~~l~~~~~~~~~-~~~~~~---~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~AL 139 (446)
T cd07106 74 --AEA--------QFEVGGAVAWLRYTASLDLP-DEVIED---DDTRRVELRRKPLGVVAAIVPWNFPLLLAAWKIAPAL 139 (446)
T ss_pred --HHH--------HHHHHHHHHHHHHHHhhhhc-CccccC---CCCceEEEEEEcceEEEEEcCCChHHHHHHHHHHHHH
Confidence 111 23677788888887755422 221111 1234568889999999999998 695 5789999999
Q ss_pred HhCCEEEEeCCcchHHHHHHHHHHHHHhcccccCcCceEEecCCchHHHhhcCCCCccEEEeecCHHHHHHHHHhcC---
Q 005047 426 RSGNGLLLKGGKEAMRSNAILHKVITSAIPDTVGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK--- 502 (716)
Q Consensus 426 aaGNtvv~Kps~~tp~t~~~l~~l~~~al~~alP~gvv~vv~~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a~--- 502 (716)
++||+||+|||++||+|+.++++++++ ++|+|++|+|+|+.+++..|..||+||+|+||||+++|+.|++++.
T Consensus 140 aaGN~VilKps~~~p~~~~~l~~~~~~----~lP~g~~~~v~g~~~~~~~l~~~~~vd~V~fTGs~~~g~~v~~~aa~~~ 215 (446)
T cd07106 140 LAGNTVVLKPSPFTPLCTLKLGELAQE----VLPPGVLNVVSGGDELGPALTSHPDIRKISFTGSTATGKKVMASAAKTL 215 (446)
T ss_pred HcCCEEEEECCccchHHHHHHHHHHHH----hCCcCeEEEeeCChhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcC
Confidence 999999999999999999999999986 5999999999975567888889999999999999999999998773
Q ss_pred CCEEEecCCcceEEEcCCCCHHHHHHHHHHhcCCCCC-ccccccceEEEeCccCChhhHHHHHHHHHhcCC---------
Q 005047 503 IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMVETLLVHKDLACNGALNELVVELQHEGV--------- 572 (716)
Q Consensus 503 ~~~~lElGGk~p~iV~~dADl~~Aa~~iv~~~f~n~g-~C~a~~~rv~V~~~i~dd~f~~~l~~~~~~~~~--------- 572 (716)
+|++||||||||+||++|||+|.|++.+++|+|.|+| .|+|+ +|||||+++| |+|+++|+++++++.+
T Consensus 216 ~~~~lElGG~~p~iV~~dADl~~aa~~iv~~~~~~~GQ~C~a~-~rv~V~~~v~-d~f~~~l~~~~~~~~~G~p~~~~~~ 293 (446)
T cd07106 216 KRVTLELGGNDAAIVLPDVDIDAVAPKLFWGAFINSGQVCAAI-KRLYVHESIY-DEFCEALVALAKAAVVGDGLDPGTT 293 (446)
T ss_pred CeeEEecCCCCeeEECCCCCHHHHHHHHHHHHHHhcCCCCCCC-cEEEEccccH-HHHHHHHHHHHHhcCCCCCCCCCCC
Confidence 8999999999999999999999999999999999986 99999 9999999999 7999999999987632
Q ss_pred -------------------------EE-ecCccc--ccc-c-c-C-----CCCccccccccCceEEEEEeCCHHHHHHHH
Q 005047 573 -------------------------GL-FGGPRA--SKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHI 616 (716)
Q Consensus 573 -------------------------~~-~g~~~~--~~~-~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~a 616 (716)
++ .|+... .++ + | | +++++++||+||||++|++|+|+||||+++
T Consensus 294 ~gpli~~~~~~~i~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~FgPvl~v~~~~~~~eai~~~ 373 (446)
T cd07106 294 LGPVQNKMQYDKVKELVEDAKAKGAKVLAGGEPLDGPGYFIPPTIVDDPPEGSRIVDEEQFGPVLPVLKYSDEDEVIARA 373 (446)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeeEcCEEEeCCCCCCHHHhcCccCCeEEEEeeCCHHHHHHHH
Confidence 11 233221 133 3 6 2 468999999999999999999999999999
Q ss_pred HhcCCCceeEEEccCHHHHHHHHHccCcceEEEcCCcCCCCCCcccCcceeeccccccccccccchhcccEEEEEE
Q 005047 617 HQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 692 (716)
Q Consensus 617 N~~~~GL~a~i~t~d~~~a~~~~~~~~~G~v~vN~~~~~~~~~p~g~g~~sG~~~~~~~~~g~~gl~~ft~~k~v~ 692 (716)
|+++|||++||||+|.++++++++++++|+|+||++....+..||||.++||+| +++|++|+++||+.|+|.
T Consensus 374 n~~~~gL~~~i~t~d~~~~~~~~~~~~~G~v~iN~~~~~~~~~pfGG~~~SG~G----~~~g~~~~~~~t~~k~v~ 445 (446)
T cd07106 374 NDSEYGLGASVWSSDLERAEAVARRLEAGTVWINTHGALDPDAPFGGHKQSGIG----VEFGIEGLKEYTQTQVIN 445 (446)
T ss_pred hCCCCCceEEEECCCHHHHHHHHHhCCccEEEECCCCCCCCCCCCCCccccccC----ccchHHHHHHhhceeEEe
Confidence 999999999999999999999999999999999998877788999999999986 357999999999999985
No 33
>TIGR01780 SSADH succinate-semialdehyde dehydrogenase. SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070).
Probab=100.00 E-value=6.8e-74 Score=641.23 Aligned_cols=392 Identities=16% Similarity=0.175 Sum_probs=336.1
Q ss_pred HHHhcCCcceeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHh
Q 005047 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 347 (716)
Q Consensus 268 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~ 347 (716)
.+|.||+.++++...+ .+++++++++|++||+.|+++|.++|.++|++++++|++++++|+.++.+|.++...
T Consensus 2 ~~P~tg~~i~~~~~~~------~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~- 74 (448)
T TIGR01780 2 YNPATGEIIGTVPDQG------VEEAEAAIRAAYEAFKTWKNTTAKERSSLLRKWYNLMMENKDDLARLITLENGKPLK- 74 (448)
T ss_pred cCCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH-
Confidence 3578999999998888 889999999999999999999999999999999999999999999988876654321
Q ss_pred chhHHHHHHhhcCHHHHHHHHHHHHHHhcccc-cccccccccccCCCeEEEEeecceeEEEEEcCC-Cch-hHHHHHHHH
Q 005047 348 GYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 424 (716)
Q Consensus 348 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~-~P~-~~~~~~~~A 424 (716)
++ ..|+...++.+++++...+ ..+...+.. ..+...+.+++|+|||++|+|| ||. +.+++++||
T Consensus 75 ---~a--------~~ev~~~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~A 141 (448)
T TIGR01780 75 ---EA--------KGEILYAASFLEWFAEEAKRVYGDTIPSP--QSDKRLLVIKQPVGVCAAITPWNFPAAMITRKAGAA 141 (448)
T ss_pred ---HH--------HHHHHHHHHHHHHHHHHHHHhcCccccCC--CCCceeEEEEeeeeEEEEEcCCChHHHHHHHHHHHH
Confidence 22 2366777777777664332 223322211 1234567789999999999998 696 467999999
Q ss_pred HHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC--CchHHHhhcCCCCccEEEeecCHHHHHHHHHhc
Q 005047 425 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS--REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST 501 (716)
Q Consensus 425 LaaGNtvv~Kps~~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~--~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a 501 (716)
|++||+||+|||+.||+|+..+++++.+ + +|+|++|+|+| +.++++.|..||+||+|+||||+.+|+.|++.+
T Consensus 142 LaaGN~VvlKps~~~p~~~~~l~~~~~~----aGlP~gvv~~v~g~~~~~~~~~l~~~~~i~~v~ftGs~~~g~~v~~~a 217 (448)
T TIGR01780 142 LAAGCTVVVKPAEQTPLSALALARLAEQ----AGIPKGVLNVITGSRAKEVGKVLCTSPLVRKISFTGSTNVGKILMKQS 217 (448)
T ss_pred HHcCCeEeeECCccchHHHHHHHHHHHH----cCCCccceEEEeCCCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHH
Confidence 9999999999999999999999999986 7 99999999995 467788888999999999999999999999877
Q ss_pred C---CCEEEecCCcceEEEcCCCCHHHHHHHHHHhcCCCCC-ccccccceEEEeCccCChhhHHHHHHHHHhcCC-----
Q 005047 502 K---IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMVETLLVHKDLACNGALNELVVELQHEGV----- 572 (716)
Q Consensus 502 ~---~~~~lElGGk~p~iV~~dADl~~Aa~~iv~~~f~n~g-~C~a~~~rv~V~~~i~dd~f~~~l~~~~~~~~~----- 572 (716)
. +|++||||||||+||++|||+|.|++.+++|+|.|+| .|+|+ +|+|||+++| |+|+++|+++++++.+
T Consensus 218 a~~~~~~~lElGGk~~~iV~~dadl~~aa~~iv~~~f~~sGQ~C~a~-~rv~V~~~i~-d~f~~~l~~~~~~l~~G~p~~ 295 (448)
T TIGR01780 218 ASTVKKVSMELGGNAPFIVFDDADIDQAVEGAMASKFRNAGQTCVCA-NRLYVHDGIY-DEFAKKLAEAVKKLKVGNGLD 295 (448)
T ss_pred hhcCCceEeecCCCCeeEECCCCCHHHHHHHHHHHHHHhcCCcccCC-ceeechHHHH-HHHHHHHHHHHHhcCCCCCCC
Confidence 3 8999999999999999999999999999999999986 99999 9999999999 7999999999987631
Q ss_pred -----------------------------EE-ecCccc--cc-cc-c-C-----CCCccccccccCceEEEEEeCCHHHH
Q 005047 573 -----------------------------GL-FGGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAA 612 (716)
Q Consensus 573 -----------------------------~~-~g~~~~--~~-~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deA 612 (716)
++ .|+... .+ |+ | | ++|++++||+||||++|++|+|+|||
T Consensus 296 ~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~il~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~~ea 375 (448)
T TIGR01780 296 EGVTQGPLINEKAVEKVEKHIADAVEKGAKVVTGGKRHELGGNFFEPTVLSNVTQDMLVAKEETFGPLAPVFKFDDEEEV 375 (448)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeeEcCEEEecCCCCChHhhCCCCCceEEEEEECCHHHH
Confidence 12 233221 23 33 5 2 46899999999999999999999999
Q ss_pred HHHHHhcCCCceeEEEccCHHHHHHHHHccCcceEEEcCCcCCCCCCcccCcceeeccccccccccccchhcccEEE
Q 005047 613 IDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTR 689 (716)
Q Consensus 613 i~~aN~~~~GL~a~i~t~d~~~a~~~~~~~~~G~v~vN~~~~~~~~~p~g~g~~sG~~~~~~~~~g~~gl~~ft~~k 689 (716)
|+++|+++|||++||||+|.++++++++++++|.||||++....+..||||.+.||+| +++|++|+++||+.|
T Consensus 376 i~~an~~~~gL~~~vfs~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G----~~~g~~~~~~~~~~k 448 (448)
T TIGR01780 376 IAIANDTEVGLAAYFFSRDLATIWRVAEALEYGMVGINTGLISNVVAPFGGVKQSGLG----REGSKYGIEEYLETK 448 (448)
T ss_pred HHHHhCCCcCceEEEECCCHHHHHHHHHhCCccEEEECCCCCCCCCCCCCCcccccCC----ccchHHHHHHHhccC
Confidence 9999999999999999999999999999999999999998766667899999999986 356999999999875
No 34
>PRK13473 gamma-aminobutyraldehyde dehydrogenase; Provisional
Probab=100.00 E-value=8.4e-74 Score=645.47 Aligned_cols=400 Identities=15% Similarity=0.171 Sum_probs=341.7
Q ss_pred HHHHhcCCcceeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Q 005047 267 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 346 (716)
Q Consensus 267 l~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~ 346 (716)
+.+|.+|+.++++..++ .+|+++++++|++||+.|++++.++|.++|++++++|++++++|++++.+|++++..
T Consensus 21 ~~~P~t~~~i~~~~~~~------~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ 94 (475)
T PRK13473 21 VYNPATGEVLAEIAEAS------AAQVDAAVAAADAAFPEWSQTTPKERAEALLKLADAIEENADEFARLESLNCGKPLH 94 (475)
T ss_pred eECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHH
Confidence 46788999999999988 889999999999999999999999999999999999999999999988776654321
Q ss_pred hchhHHHHHHhhcCHHHHHHHHHHHHHHhcccccc-cccccccccCCCeEEEEeecceeEEEEEcCC-Cch-hHHHHHHH
Q 005047 347 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEPI-GQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 423 (716)
Q Consensus 347 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~-~P~-~~~~~~~~ 423 (716)
++. ..|+..+++.+++++...+.. +...+.. ..+...+++|+|+|||++|+|| ||. +.+++++|
T Consensus 95 ----~a~-------~~ev~~~~~~~~~~a~~~~~~~g~~~~~~--~~~~~~~~~r~P~GVv~~I~p~N~P~~~~~~~i~~ 161 (475)
T PRK13473 95 ----LAL-------NDEIPAIVDVFRFFAGAARCLEGKAAGEY--LEGHTSMIRRDPVGVVASIAPWNYPLMMAAWKLAP 161 (475)
T ss_pred ----HHH-------HHHHHHHHHHHHHHHHHHHHhcCcccccC--CCCceeEEEEecceeEEEEccCChHHHHHHHHHHH
Confidence 111 125667777777766443322 2211110 1233467889999999999998 686 56899999
Q ss_pred HHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccccCcCceEEecC-CchHHHhhcCCCCccEEEeecCHHHHHHHHHhcC
Q 005047 424 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDTVGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK 502 (716)
Q Consensus 424 ALaaGNtvv~Kps~~tp~t~~~l~~l~~~al~~alP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a~ 502 (716)
||++||+||+|||+.||+++.++++++.+ +||+|++|+|+| +.+++..|..||+||+|+||||+++|+.|++++.
T Consensus 162 ALaaGN~VIlKps~~~p~~~~~l~~~~~~----alP~gv~~~v~g~~~~~~~~l~~~~~vd~V~fTGs~~~g~~i~~~aa 237 (475)
T PRK13473 162 ALAAGNTVVLKPSEITPLTALKLAELAAD----ILPPGVLNVVTGRGATVGDALVGHPKVRMVSLTGSIATGKHVLSAAA 237 (475)
T ss_pred HHhcCCEEEEECCCCChHHHHHHHHHHHH----hCCcCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHh
Confidence 99999999999999999999999999986 499999999996 6678888889999999999999999999998773
Q ss_pred ---CCEEEecCCcceEEEcCCCCHHHHHHHHHHhcCCCCC-ccccccceEEEeCccCChhhHHHHHHHHHhcCC------
Q 005047 503 ---IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMVETLLVHKDLACNGALNELVVELQHEGV------ 572 (716)
Q Consensus 503 ---~~~~lElGGk~p~iV~~dADl~~Aa~~iv~~~f~n~g-~C~a~~~rv~V~~~i~dd~f~~~l~~~~~~~~~------ 572 (716)
+|+++|||||||+||++|||+|.|++.+++++|.|+| .|+|+ +|||||++|| |+|+++|+++++++.+
T Consensus 238 ~~~~~~~lElgG~~p~iV~~dADld~Aa~~i~~~~f~n~GQ~C~a~-~rv~V~~~i~-d~f~~~l~~~~~~l~~G~p~~~ 315 (475)
T PRK13473 238 DSVKRTHLELGGKAPVIVFDDADLDAVVEGIRTFGYYNAGQDCTAA-CRIYAQRGIY-DDLVAKLAAAVATLKVGDPDDE 315 (475)
T ss_pred hcCCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCCCC-eEEEEcHHHH-HHHHHHHHHHHHhCCCCCCCCC
Confidence 8999999999999999999999999999999999987 99999 9999999999 7999999999887531
Q ss_pred -----------------------------EE-ecCccc--cc-cc-c-C-----CCCccccccccCceEEEEEeCCHHHH
Q 005047 573 -----------------------------GL-FGGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAA 612 (716)
Q Consensus 573 -----------------------------~~-~g~~~~--~~-~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deA 612 (716)
++ .|+... .+ |+ | | +++++++||+||||++|++|+|+|||
T Consensus 316 ~~~~gpli~~~~~~~v~~~i~~a~~~G~a~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~dea 395 (475)
T PRK13473 316 DTELGPLISAAHRDRVAGFVERAKALGHIRVVTGGEAPDGKGYYYEPTLLAGARQDDEIVQREVFGPVVSVTPFDDEDQA 395 (475)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHcCCeEEEECCCcCCCCceeEcCEEEecCCCCChhhhCCccCCeEEEeccCCHHHH
Confidence 12 233322 23 33 5 2 36899999999999999999999999
Q ss_pred HHHHHhcCCCceeEEEccCHHHHHHHHHccCcceEEEcCCcCCCCCCcccCcceeeccccccccccccchhcccEEEEEE
Q 005047 613 IDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 692 (716)
Q Consensus 613 i~~aN~~~~GL~a~i~t~d~~~a~~~~~~~~~G~v~vN~~~~~~~~~p~g~g~~sG~~~~~~~~~g~~gl~~ft~~k~v~ 692 (716)
|+++|+++|||++||||+|.+++.++++++++|+|+||++....+.+||||.+.||+| +++|++|+++||+.|+++
T Consensus 396 i~~~N~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G----~~~g~~~~~~~t~~k~i~ 471 (475)
T PRK13473 396 VRWANDSDYGLASSVWTRDVGRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKQSGYG----KDMSLYGLEDYTVVRHVM 471 (475)
T ss_pred HHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCccccccC----ccchHHHHHHHhceEEEE
Confidence 9999999999999999999999999999999999999998766677899999999986 356999999999999998
Q ss_pred EcC
Q 005047 693 RGN 695 (716)
Q Consensus 693 ~~~ 695 (716)
+++
T Consensus 472 ~~~ 474 (475)
T PRK13473 472 VKH 474 (475)
T ss_pred Eec
Confidence 754
No 35
>TIGR02299 HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase. This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring.
Probab=100.00 E-value=1.4e-73 Score=645.26 Aligned_cols=396 Identities=20% Similarity=0.209 Sum_probs=339.2
Q ss_pred HHHhcCCcceeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHh
Q 005047 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 347 (716)
Q Consensus 268 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~ 347 (716)
.+|.+|+.++++..++ .+++++++++|++||+.|+++|.++|.++|++++++|++++++|++++++|++++..
T Consensus 21 ~nP~tg~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~Gk~~~- 93 (488)
T TIGR02299 21 LSPATNEVLGSVARGG------AADVDRAAKAAKEAFKRWAELKAAERKRYLHKIADLIEQHADEIAVLECLDCGQPLR- 93 (488)
T ss_pred ECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHH-
Confidence 5678999999998888 889999999999999999999999999999999999999999999998877654321
Q ss_pred chhHHHHHHhhcCHHHHHHHHHHHHHHhcccc--cccccccccccCCCeEEEEeecceeEEEEEcCC-Cch-hHHHHHHH
Q 005047 348 GYAKSLVSRLALKPGKISSLAKSIRILADMEE--PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 423 (716)
Q Consensus 348 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~-~P~-~~~~~~~~ 423 (716)
++ ..++...++.+++++...+ ..+...+. .....+.+++|+|||++|+|| ||. +.++++++
T Consensus 94 ---~a--------~~ev~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ 158 (488)
T TIGR02299 94 ---QT--------RQQVIRAAENFRFFADKCEEAMDGRTYPV----DTHLNYTVRVPVGPVGLITPWNAPFMLSTWKIAP 158 (488)
T ss_pred ---HH--------HHHHHHHHHHHHHHHHhHHHhcCCccccC----CCceEEEEEEecceEEEECCCccHHHHHHHHHHH
Confidence 22 1355566666666654332 12222221 123467889999999999998 695 56899999
Q ss_pred HHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CchHHHhhcCCCCccEEEeecCHHHHHHHHHhc
Q 005047 424 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST 501 (716)
Q Consensus 424 ALaaGNtvv~Kps~~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a 501 (716)
||++||+||+|||+.||+|+.++++++.+ + +|+|++|+|+| ++++++.|..||+||+|+||||+++|+.|++.+
T Consensus 159 ALaaGN~VIlKps~~~p~~~~~l~~~~~~----aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~a 234 (488)
T TIGR02299 159 ALAFGNTVVLKPAEWSPLTAARLAEIAKE----AGLPDGVFNLVHGFGEEAGKALVAHPDVKAVSFTGETATGSIIMRNG 234 (488)
T ss_pred HHHcCCEEEEECchhchHHHHHHHHHHHH----cCcChhheeEEeCCchHHHHHHhcCCCcCEEEEECcHHHHHHHHHHH
Confidence 99999999999999999999999999986 8 99999999996 666778888999999999999999999999886
Q ss_pred ---CCCEEEecCCcceEEEcCCCCHHHHHHHHHHhcCCCCC-ccccccceEEEeCccCChhhHHHHHHHHHhcCC-----
Q 005047 502 ---KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMVETLLVHKDLACNGALNELVVELQHEGV----- 572 (716)
Q Consensus 502 ---~~~~~lElGGk~p~iV~~dADl~~Aa~~iv~~~f~n~g-~C~a~~~rv~V~~~i~dd~f~~~l~~~~~~~~~----- 572 (716)
.+|++||||||||+||++|||+|.|++.+++|+|.|+| +|+|+ +|+|||+++| |+|+++|+++++++++
T Consensus 235 a~~l~~~~lElGGknp~iV~~dAdl~~A~~~i~~~~~~~~GQ~C~a~-~rv~V~~~v~-d~f~~~l~~~~~~l~~g~p~~ 312 (488)
T TIGR02299 235 ADTLKRFSMELGGKSPVIVFDDADLERALDAVVFMIFSFNGERCTAS-SRLLVQESIA-EDFVEKLVERVRAIRVGHPLD 312 (488)
T ss_pred HhcCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhccCCCCCCC-cEEEEcHHHH-HHHHHHHHHHHhhCCcCCCCC
Confidence 38999999999999999999999999999999999886 99999 9999999999 7999999999887631
Q ss_pred -----------------------------EE-ecCccc---------cc-cc-c-C-----CCCccccccccCceEEEEE
Q 005047 573 -----------------------------GL-FGGPRA---------SK-LL-Q-I-----PETRLFHHEYNSMVCTVEI 605 (716)
Q Consensus 573 -----------------------------~~-~g~~~~---------~~-~~-p-v-----~~~~~~~eE~FGPVl~v~~ 605 (716)
++ .|+... .+ ++ | | +++++++||+||||++|++
T Consensus 313 ~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~ 392 (488)
T TIGR02299 313 PETEVGPLIHPEHLAKVLGYVEAAEKEGATILVGGERAPTFRGEDLGRGNYVLPTVFTGADNHMRIAQEEIFGPVLTVIP 392 (488)
T ss_pred CCCCCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccCcccccccCCCCeEEccEEEecCCCCCchhhCCCcCCeEEEEe
Confidence 22 233221 13 33 5 2 3689999999999999999
Q ss_pred eCCHHHHHHHHHhcCCCceeEEEccCHHHHHHHHHccCcceEEEcCCcCCCCCCcccCcceeeccccccccccccchhcc
Q 005047 606 VDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGL 685 (716)
Q Consensus 606 ~~~~deAi~~aN~~~~GL~a~i~t~d~~~a~~~~~~~~~G~v~vN~~~~~~~~~p~g~g~~sG~~~~~~~~~g~~gl~~f 685 (716)
|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+.....+..||||.+.||+| +++|++|+++|
T Consensus 393 ~~~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G----~~~g~~~~~~~ 468 (488)
T TIGR02299 393 FKDEEEAIEKANDTRYGLAGYVWTNDVGRAHRVALALEAGMIWVNSQNVRHLPTPFGGVKASGIG----REGGTYSFDFY 468 (488)
T ss_pred eCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCccCcCC----ccchHHHHHHH
Confidence 99999999999999999999999999999999999999999999987766667899999999986 35699999999
Q ss_pred cEEEEEEEcC
Q 005047 686 LTTRWILRGN 695 (716)
Q Consensus 686 t~~k~v~~~~ 695 (716)
|+.|+|+++.
T Consensus 469 ~~~k~i~~~~ 478 (488)
T TIGR02299 469 TETKNVALAL 478 (488)
T ss_pred hceEEEEEec
Confidence 9999998865
No 36
>cd07151 ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like. NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD.
Probab=100.00 E-value=2e-73 Score=640.32 Aligned_cols=397 Identities=19% Similarity=0.217 Sum_probs=338.2
Q ss_pred HHHhcCCcceeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHh
Q 005047 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 347 (716)
Q Consensus 268 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~ 347 (716)
.+|++|+.++++...+ .+++++++++|++||+.|++++..+|.++|++++++|++|+++|++++.+|.+++..
T Consensus 15 ~~P~t~~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~- 87 (465)
T cd07151 15 LNPYTGETLAEIPAAS------KEDVDEAYRAAAAAQKEWAATLPQERAEILEKAAQILEERRDEIVEWLIRESGSTRI- 87 (465)
T ss_pred ECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH-
Confidence 5678899999998888 889999999999999999999999999999999999999999999998877654421
Q ss_pred chhHHHHHHhhcCHHHHHHHHHHHHHHhccccc-ccccccccccCCCeEEEEeecceeEEEEEcCC-Cch-hHHHHHHHH
Q 005047 348 GYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 424 (716)
Q Consensus 348 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~-~P~-~~~~~~~~A 424 (716)
++ ..|+..+++.+++++.+.+. .+...+.. ..+...+++|+|+|||++|+|| ||. +.+++++||
T Consensus 88 ---~a--------~~Ev~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~A 154 (465)
T cd07151 88 ---KA--------NIEWGAAMAITREAATFPLRMEGRILPSD--VPGKENRVYREPLGVVGVISPWNFPLHLSMRSVAPA 154 (465)
T ss_pred ---HH--------HHHHHHHHHHHHHHHHhHHHhcCccccCC--CCCceeEEEEecceEEEEECCCChHHHHHHHHHHHH
Confidence 22 23567777777777654432 22222211 1244567889999999999998 695 578999999
Q ss_pred HHhCCEEEEeCCcchHHHH-HHHHHHHHHhcccc-cCcCceEEecC-CchHHHhhcCCCCccEEEeecCHHHHHHHHHhc
Q 005047 425 IRSGNGLLLKGGKEAMRSN-AILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST 501 (716)
Q Consensus 425 LaaGNtvv~Kps~~tp~t~-~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a 501 (716)
|++||+||+|||+.||+++ .++.+++.+ + +|+|++|+|+| +.+++..|..||.+|+|+||||+++|+.|++.+
T Consensus 155 LaaGN~Vi~Kps~~~p~~~~~~l~~~l~~----aG~P~gvv~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a 230 (465)
T cd07151 155 LALGNAVVLKPASDTPITGGLLLAKIFEE----AGLPKGVLNVVVGAGSEIGDAFVEHPVPRLISFTGSTPVGRHIGELA 230 (465)
T ss_pred HHcCCEEEEECCCCCcHhHHHHHHHHHHH----cCcCccceEEEecCchhhHHHHhcCCCCCEEEEECCHHHHHHHHHHH
Confidence 9999999999999999996 688888886 8 99999999996 567788888999999999999999999998877
Q ss_pred ---CCCEEEecCCcceEEEcCCCCHHHHHHHHHHhcCCCCC-ccccccceEEEeCccCChhhHHHHHHHHHhcCC-----
Q 005047 502 ---KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMVETLLVHKDLACNGALNELVVELQHEGV----- 572 (716)
Q Consensus 502 ---~~~~~lElGGk~p~iV~~dADl~~Aa~~iv~~~f~n~g-~C~a~~~rv~V~~~i~dd~f~~~l~~~~~~~~~----- 572 (716)
.+|++||||||||+||++|||+|.|++.+++++|.|+| .|+++ +|||||++|| |+|+++|+++++++.+
T Consensus 231 a~~~~~~~lElGGk~p~iV~~daDl~~Aa~~i~~~~f~~~GQ~C~a~-~rv~V~~~i~-~~f~~~l~~~~~~~~~g~p~~ 308 (465)
T cd07151 231 GRHLKKVALELGGNNPFVVLEDADIDAAVNAAVFGKFLHQGQICMAI-NRIIVHEDVY-DEFVEKFVERVKALPYGDPSD 308 (465)
T ss_pred HhcCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCC-cEEEEeHHHH-HHHHHHHHHHHHhCCCCCCCC
Confidence 38999999999999999999999999999999999987 99999 9999999999 7999999999887632
Q ss_pred -----------------------------EE-ecCccccccc-c-C-----CCCccccccccCceEEEEEeCCHHHHHHH
Q 005047 573 -----------------------------GL-FGGPRASKLL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDH 615 (716)
Q Consensus 573 -----------------------------~~-~g~~~~~~~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~ 615 (716)
++ .|+.....++ | | +++++++||+||||++|++|+|+||||++
T Consensus 309 ~~~~~gpli~~~~~~~v~~~v~~a~~~ga~vl~gg~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~ 388 (465)
T cd07151 309 PDTVVGPLINESQVDGLLDKIEQAVEEGATLLVGGEAEGNVLEPTVLSDVTNDMEIAREEIFGPVAPIIKADDEEEALEL 388 (465)
T ss_pred CCCCcCCCcCHHHHHHHHHHHHHHHhCCCEEEecCCcCCEEEccEEEeCCCCCCchhhCcCcCCeEEEEeeCCHHHHHHH
Confidence 11 1222111133 5 2 36899999999999999999999999999
Q ss_pred HHhcCCCceeEEEccCHHHHHHHHHccCcceEEEcCCcCC-CCCCcccCcceeeccccccccccccchhcccEEEEEEEc
Q 005047 616 IHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRF-CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRG 694 (716)
Q Consensus 616 aN~~~~GL~a~i~t~d~~~a~~~~~~~~~G~v~vN~~~~~-~~~~p~g~g~~sG~~~~~~~~~g~~gl~~ft~~k~v~~~ 694 (716)
+|+++|||++||||+|.++++++++++++|+|+||+++.. .+.+||||.+.||+| +++|++|+++||+.|++++.
T Consensus 389 ~n~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G----~~~g~~~l~~~t~~k~~~~~ 464 (465)
T cd07151 389 ANDTEYGLSGAVFTSDLERGVQFARRIDAGMTHINDQPVNDEPHVPFGGEKNSGLG----RFNGEWALEEFTTDKWISVQ 464 (465)
T ss_pred HhCCCccceEEEECCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCcccccCC----cCChHHHHHHhhceEEEEec
Confidence 9999999999999999999999999999999999987654 357899999999886 35799999999999998763
No 37
>PLN02467 betaine aldehyde dehydrogenase
Probab=100.00 E-value=1.5e-73 Score=643.61 Aligned_cols=400 Identities=18% Similarity=0.174 Sum_probs=340.1
Q ss_pred HHHhcCCcceeEEecCCccccchhhHHHHHHHHHHHH-----HHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHH
Q 005047 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESS-----RRLQALQSQDRRKILLDVADALEANESLIKVENEADVA 342 (716)
Q Consensus 268 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~-----~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~ 342 (716)
.+|.+|+.++++...+ .+|+++|+++|++|| +.|+++|..+|.++|++++++|++|+++|++++++|.|
T Consensus 28 ~~P~t~~~i~~~~~~~------~~dv~~av~~A~~a~~~~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~G 101 (503)
T PLN02467 28 VNPATEETIGDIPAAT------AEDVDAAVEAARKAFKRNKGKDWARTTGAVRAKYLRAIAAKITERKSELAKLETLDCG 101 (503)
T ss_pred ECCCCCCEEEEEcCCC------HHHHHHHHHHHHHHhhhcccchhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcC
Confidence 5678999999998888 889999999999999 89999999999999999999999999999999887765
Q ss_pred HHHHhchhHHHHHHhhcCHHHHHHHHHHHHHHhccccc-cccccc-ccccCCCeEEEEeecceeEEEEEcCC-Cch-hHH
Q 005047 343 AAQEAGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILK-RTELADGLILEKTSCPLGVLLIVFES-RPD-ALV 418 (716)
Q Consensus 343 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~-~~~~~~~~~~~~~~~PlGVv~~I~p~-~P~-~~~ 418 (716)
++.. ++ ..|+..+++.+++++...+. .+.... ......+...+++|+|+|||++|+|| ||. +.+
T Consensus 102 k~~~----~a--------~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~ 169 (503)
T PLN02467 102 KPLD----EA--------AWDMDDVAGCFEYYADLAEALDAKQKAPVSLPMETFKGYVLKEPLGVVGLITPWNYPLLMAT 169 (503)
T ss_pred CCHH----HH--------HHHHHHHHHHHHHHHHHHHHhcCccccccCCCCCCceeEEEEecCceEEEECCCChHHHHHH
Confidence 4421 22 13566666666666643322 122110 00001133467889999999999999 695 578
Q ss_pred HHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CchHHHhhcCCCCccEEEeecCHHHHHH
Q 005047 419 QIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQ 496 (716)
Q Consensus 419 ~~~~~ALaaGNtvv~Kps~~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~ 496 (716)
++++|||++||+||+|||+.||+|+..+++++++ + +|+|++|+|+| +.++++.|..||+||+|+||||+.+|+.
T Consensus 170 ~~i~~ALaaGN~Vv~Kps~~tp~~~~~l~~~~~e----ag~P~gvv~~v~g~~~~~~~~L~~~~~v~~v~fTGs~~~g~~ 245 (503)
T PLN02467 170 WKVAPALAAGCTAVLKPSELASVTCLELADICRE----VGLPPGVLNVVTGLGTEAGAPLASHPGVDKIAFTGSTATGRK 245 (503)
T ss_pred HHHHHHHHcCCEEEEECCCcCcHHHHHHHHHHHH----cCcCcCeEEEEeCCchhHHHHHhcCCCCCEEEEECCHHHHHH
Confidence 9999999999999999999999999999999986 7 99999999996 5677888889999999999999999999
Q ss_pred HHHhcC---CCEEEecCCcceEEEcCCCCHHHHHHHHHHhcCCCCC-ccccccceEEEeCccCChhhHHHHHHHHHhcCC
Q 005047 497 IKESTK---IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMVETLLVHKDLACNGALNELVVELQHEGV 572 (716)
Q Consensus 497 i~~~a~---~~~~lElGGk~p~iV~~dADl~~Aa~~iv~~~f~n~g-~C~a~~~rv~V~~~i~dd~f~~~l~~~~~~~~~ 572 (716)
|++.+. ||+++|||||||+||++|||++.|++.+++|+|.|+| .|+|+ +|||||+++| |+|+++|+++++++.+
T Consensus 246 v~~~aa~~~~~~~lElGG~~~~iV~~dADl~~A~~~i~~~~f~~~GQ~C~a~-~rv~V~~~i~-d~f~~~l~~~~~~l~~ 323 (503)
T PLN02467 246 IMTAAAQMVKPVSLELGGKSPIIVFDDVDLDKAVEWAMFGCFWTNGQICSAT-SRLLVHERIA-SEFLEKLVKWAKNIKI 323 (503)
T ss_pred HHHHHhccCCcEEEECCCCCceEECCCCCHHHHHHHHHHHHHhhcCCCCCCC-cEEEEcHHHH-HHHHHHHHHHHHhcCC
Confidence 998773 8999999999999999999999999999999999987 99999 9999999999 7999999999887521
Q ss_pred ----------------------------------EE-ecCccc----ccc-c-c-C-----CCCccccccccCceEEEEE
Q 005047 573 ----------------------------------GL-FGGPRA----SKL-L-Q-I-----PETRLFHHEYNSMVCTVEI 605 (716)
Q Consensus 573 ----------------------------------~~-~g~~~~----~~~-~-p-v-----~~~~~~~eE~FGPVl~v~~ 605 (716)
++ .|+.+. .++ + | | +++++++||+||||++|++
T Consensus 324 g~p~~~~~~~Gpli~~~~~~~v~~~v~~a~~~Ga~vl~gG~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~ 403 (503)
T PLN02467 324 SDPLEEGCRLGPVVSEGQYEKVLKFISTAKSEGATILCGGKRPEHLKKGFFIEPTIITDVTTSMQIWREEVFGPVLCVKT 403 (503)
T ss_pred CCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCeEEeeEEEeCCCCCChHhhCCCCCceEEEEe
Confidence 12 233221 133 3 5 2 3689999999999999999
Q ss_pred eCCHHHHHHHHHhcCCCceeEEEccCHHHHHHHHHccCcceEEEcCCcCCCCCCcccCcceeeccccccccccccchhcc
Q 005047 606 VDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGL 685 (716)
Q Consensus 606 ~~~~deAi~~aN~~~~GL~a~i~t~d~~~a~~~~~~~~~G~v~vN~~~~~~~~~p~g~g~~sG~~~~~~~~~g~~gl~~f 685 (716)
|+|+||||+++|+++|||+++|||+|.++++++++++++|+||||++.......||||.+.||+| +++|++|+++|
T Consensus 404 ~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G----~~~G~~~l~~f 479 (503)
T PLN02467 404 FSTEDEAIELANDSHYGLAGAVISNDLERCERVSEAFQAGIVWINCSQPCFCQAPWGGIKRSGFG----RELGEWGLENY 479 (503)
T ss_pred eCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccCcCC----CcchHHHHHHh
Confidence 99999999999999999999999999999999999999999999987665667899999999886 35699999999
Q ss_pred cEEEEEEEcC
Q 005047 686 LTTRWILRGN 695 (716)
Q Consensus 686 t~~k~v~~~~ 695 (716)
|+.|++.+..
T Consensus 480 t~~k~i~~~~ 489 (503)
T PLN02467 480 LSVKQVTKYI 489 (503)
T ss_pred hCeEEEEEec
Confidence 9999998853
No 38
>PTZ00381 aldehyde dehydrogenase family protein; Provisional
Probab=100.00 E-value=1.7e-73 Score=640.22 Aligned_cols=386 Identities=18% Similarity=0.203 Sum_probs=330.4
Q ss_pred hhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhchhHHHHHHhhcCHHHHHHHHH
Q 005047 290 QVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAK 369 (716)
Q Consensus 290 ~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 369 (716)
.+|+++++++|++||++|++++.++|.++|++++++|++|+++|++++++|++++.. ++...++..+..+++++++
T Consensus 6 ~~~i~~av~~a~~a~~~~~~~~~~~R~~~L~~l~~~l~~~~~~i~~a~~~d~Gk~~~----ea~~~Ev~~~~~~i~~~~~ 81 (493)
T PTZ00381 6 PEIIPPIVKKLKESFLTGKTRPLEFRKQQLRNLLRMLEENKQEFSEAVHKDLGRHPF----ETKMTEVLLTVAEIEHLLK 81 (493)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH----HHHHHHHHHHHHHHHHHHH
Confidence 789999999999999999999999999999999999999999999999999876532 3444456666778889998
Q ss_pred HHHHHhcccccccccccccccCCCeEEEEeecceeEEEEEcCC-Cch-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHH
Q 005047 370 SIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILH 447 (716)
Q Consensus 370 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~-~P~-~~~~~~~~ALaaGNtvv~Kps~~tp~t~~~l~ 447 (716)
.++.|+.... .. .+... .....+++|+|+|||++|+|| ||. ++++++++||+|||+||+|||+.||.|+.+++
T Consensus 82 ~~~~~~~~~~-~~--~~~~~--~~~~~~v~~~PlGVV~iI~PwN~Pl~l~~~~l~~ALaaGN~VIlKPse~tp~t~~~l~ 156 (493)
T PTZ00381 82 HLDEYLKPEK-VD--TVGVF--GPGKSYIIPEPLGVVLVIGAWNYPLNLTLIPLAGAIAAGNTVVLKPSELSPHTSKLMA 156 (493)
T ss_pred HHHHHhCCcc-cC--Ccccc--CCCceEEEEecCcEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHH
Confidence 8888864321 11 11111 112467899999999999998 695 67899999999999999999999999999999
Q ss_pred HHHHHhcccccCcCceEEecCCchHHHhhcCCCCccEEEeecCHHHHHHHHHhcC---CCEEEecCCcceEEEcCCCCHH
Q 005047 448 KVITSAIPDTVGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK---IPVLGHADGICHVYVDKSANLD 524 (716)
Q Consensus 448 ~l~~~al~~alP~gvv~vv~~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a~---~~~~lElGGk~p~iV~~dADl~ 524 (716)
+++++ +||+|++++|+|+.+++..|..|| +|+|+||||+++|+.|+++|. +|++||||||||+||++|||++
T Consensus 157 ~ll~~----~lp~~~v~vv~g~~~~~~~l~~~~-~d~i~FTGS~~vG~~V~~~aa~~l~pv~lElGGk~p~iV~~dAdl~ 231 (493)
T PTZ00381 157 KLLTK----YLDPSYVRVIEGGVEVTTELLKEP-FDHIFFTGSPRVGKLVMQAAAENLTPCTLELGGKSPVIVDKSCNLK 231 (493)
T ss_pred HHHHH----hCCcCEEEEecCCHHHHHHHHhCC-CCEEEEECCHHHHHHHHHHHHhcCCcEEEEcCCCCceEEcCCCCHH
Confidence 99986 599999999997655666666676 999999999999999998873 9999999999999999999999
Q ss_pred HHHHHHHHhcCCCCC-ccccccceEEEeCccCChhhHHHHHHHHHhcCC------------------------------E
Q 005047 525 VAKNIVIDAKIDYPA-ACNAMVETLLVHKDLACNGALNELVVELQHEGV------------------------------G 573 (716)
Q Consensus 525 ~Aa~~iv~~~f~n~g-~C~a~~~rv~V~~~i~dd~f~~~l~~~~~~~~~------------------------------~ 573 (716)
.|++.+++|+|.|+| +|+|+ +|+|||++++ |+|+++|+++++++.. +
T Consensus 232 ~Aa~~i~~g~~~naGQ~C~A~-~~vlV~~~i~-d~f~~~l~~~~~~~~g~~~~~~~~~gpli~~~~~~ri~~~i~~~ga~ 309 (493)
T PTZ00381 232 VAARRIAWGKFLNAGQTCVAP-DYVLVHRSIK-DKFIEALKEAIKEFFGEDPKKSEDYSRIVNEFHTKRLAELIKDHGGK 309 (493)
T ss_pred HHHHHHHHHHHhhcCCcCCCC-CEEEEeHHHH-HHHHHHHHHHHHHHhCCCCccCCCcCCCCCHHHHHHHHHHHHhCCCc
Confidence 999999999999987 99999 9999999999 7999999998886510 1
Q ss_pred -EecCccc-cc-cc-c-C-----CCCccccccccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEccCHHHHHHHHHccC
Q 005047 574 -LFGGPRA-SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVD 643 (716)
Q Consensus 574 -~~g~~~~-~~-~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~i~t~d~~~a~~~~~~~~ 643 (716)
+.||... .+ ++ | | ++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.+++++++++
T Consensus 310 ~~~gG~~~~~~~~i~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~~n~~~~gLa~~vft~d~~~~~~~~~~~~ 389 (493)
T PTZ00381 310 VVYGGEVDIENKYVAPTIIVNPDLDSPLMQEEIFGPILPILTYENIDEVLEFINSRPKPLALYYFGEDKRHKELVLENTS 389 (493)
T ss_pred EEECCCcCCCCCeEeeEEEecCCCCChHHhccccCCeEEEEeeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCC
Confidence 1233221 12 33 5 2 368999999999999999999999999999999999999999999999999999999
Q ss_pred cceEEEcCCcC--CCCCCcccCcceeeccccccccccccchhcccEEEEEEEcC
Q 005047 644 SAAVFHNASTR--FCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGN 695 (716)
Q Consensus 644 ~G~v~vN~~~~--~~~~~p~g~g~~sG~~~~~~~~~g~~gl~~ft~~k~v~~~~ 695 (716)
+|.|+||++.. ..+.+||||.+.||+| +++|.+|+++||+.|+|+.+.
T Consensus 390 sG~v~IN~~~~~~~~~~~PFGG~g~SG~G----~~~G~~g~~~fs~~k~v~~~~ 439 (493)
T PTZ00381 390 SGAVVINDCVFHLLNPNLPFGGVGNSGMG----AYHGKYGFDTFSHPKPVLNKS 439 (493)
T ss_pred cceEEECCccccccCCCCCCCCcCccccc----ccchHHHHHhccceeEEEEcc
Confidence 99999998753 3467899999999986 357999999999999998764
No 39
>cd07090 ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1. NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis.
Probab=100.00 E-value=1.9e-73 Score=639.96 Aligned_cols=397 Identities=16% Similarity=0.169 Sum_probs=342.4
Q ss_pred HHHhcCCcceeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHh
Q 005047 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 347 (716)
Q Consensus 268 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~ 347 (716)
.+|.+|+.++++..++ .+++++++++|++||+.|+++|.++|.++|++++++|+++.++|++++++|++++.
T Consensus 2 ~~P~t~~~i~~~~~~~------~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~-- 73 (457)
T cd07090 2 IEPATGEVLATVHCAG------AEDVDLAVKSAKAAQKEWSATSGMERGRILRKAADLLRERNDEIARLETIDNGKPI-- 73 (457)
T ss_pred cCCCCCCEEEEEcCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH--
Confidence 3578899999998888 89999999999999999999999999999999999999999999999887765432
Q ss_pred chhHHHHHHhhcCHHHHHHHHHHHHHHhccccc-ccccccccccCCCeEEEEeecceeEEEEEcCC-Cch-hHHHHHHHH
Q 005047 348 GYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 424 (716)
Q Consensus 348 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~-~P~-~~~~~~~~A 424 (716)
.++ ..++..+++.+++++.+.+. .++..+. ..+...+++++|+|||++|+|| ||. +.++++++|
T Consensus 74 --~~a--------~~ev~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~A 140 (457)
T cd07090 74 --EEA--------RVDIDSSADCLEYYAGLAPTLSGEHVPL---PGGSFAYTRREPLGVCAGIGAWNYPIQIASWKSAPA 140 (457)
T ss_pred --HHH--------HHHHHHHHHHHHHHHHHHHHhCCeeecc---CCCceEEEEEeecceEEEECCCccHHHHHHHHHHHH
Confidence 122 23566777777777654432 2322221 1245668889999999999998 696 568999999
Q ss_pred HHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecCCchHHHhhcCCCCccEEEeecCHHHHHHHHHhcC-
Q 005047 425 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK- 502 (716)
Q Consensus 425 LaaGNtvv~Kps~~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a~- 502 (716)
|++||+||+|||+.||.|+.++++++.+ + ||+|++|+|++..++++.|..||+||+|+||||+++|+.|++++.
T Consensus 141 LaaGN~Vv~Kps~~~~~~~~~l~~~~~~----aGlP~g~~~~v~g~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~ 216 (457)
T cd07090 141 LACGNAMVYKPSPFTPLTALLLAEILTE----AGLPDGVFNVVQGGGETGQLLCEHPDVAKVSFTGSVPTGKKVMSAAAK 216 (457)
T ss_pred HhcCCeeeecCCCcCcHHHHHHHHHHHH----cCCCcccEEEEeCChhhHHHHhcCCCCCEEEEECcHHHHHHHHHHHhc
Confidence 9999999999999999999999999986 8 999999999965457888889999999999999999999998874
Q ss_pred --CCEEEecCCcceEEEcCCCCHHHHHHHHHHhcCCCCC-ccccccceEEEeCccCChhhHHHHHHHHHhcCC-------
Q 005047 503 --IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMVETLLVHKDLACNGALNELVVELQHEGV------- 572 (716)
Q Consensus 503 --~~~~lElGGk~p~iV~~dADl~~Aa~~iv~~~f~n~g-~C~a~~~rv~V~~~i~dd~f~~~l~~~~~~~~~------- 572 (716)
+|+++|||||||+||++|||+|.|++.+++|+|.|+| .|+++ +|||||++|| |+|+++|+++++++..
T Consensus 217 ~~~~~~lelgG~~p~iV~~dAdl~~Aa~~i~~~~~~~~GQ~C~a~-~rv~V~~~i~-d~f~~~l~~~~~~~~~g~p~~~~ 294 (457)
T cd07090 217 GIKHVTLELGGKSPLIIFDDADLENAVNGAMMANFLSQGQVCSNG-TRVFVQRSIK-DEFTERLVERTKKIRIGDPLDED 294 (457)
T ss_pred cCCceEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCC-eEEEEcHHHH-HHHHHHHHHHHHhcCCCCCCCCC
Confidence 8999999999999999999999999999999999987 99999 9999999999 7999999999987531
Q ss_pred ---------------------------EE-ecCccc-------cc-cc-c-C-----CCCccccccccCceEEEEEeCCH
Q 005047 573 ---------------------------GL-FGGPRA-------SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDV 609 (716)
Q Consensus 573 ---------------------------~~-~g~~~~-------~~-~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~ 609 (716)
++ .|+... .+ |+ | | ++|++++||+||||++|++|+|+
T Consensus 295 ~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~ 374 (457)
T cd07090 295 TQMGALISEEHLEKVLGYIESAKQEGAKVLCGGERVVPEDGLENGFYVSPCVLTDCTDDMTIVREEIFGPVMSILPFDTE 374 (457)
T ss_pred CCcccccCHHHHHHHHHHHHHHHHCCCEEEECCCcCcccccCCCCeeECCEEEecCCCCChHHhCCCCCCeEEEEEECCH
Confidence 12 233221 12 33 5 2 36899999999999999999999
Q ss_pred HHHHHHHHhcCCCceeEEEccCHHHHHHHHHccCcceEEEcCCcCCCCCCcccCcceeeccccccccccccchhcccEEE
Q 005047 610 RAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTR 689 (716)
Q Consensus 610 deAi~~aN~~~~GL~a~i~t~d~~~a~~~~~~~~~G~v~vN~~~~~~~~~p~g~g~~sG~~~~~~~~~g~~gl~~ft~~k 689 (716)
||||+++|+++|||++||||+|.++++++++++++|+|+||+........||||.+.||+| +++|++|+++||+.|
T Consensus 375 deai~~~n~~~~gLsa~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G----~~~g~~~~~~f~~~k 450 (457)
T cd07090 375 EEVIRRANDTTYGLAAGVFTRDLQRAHRVIAQLQAGTCWINTYNISPVEVPFGGYKQSGFG----RENGTAALEHYTQLK 450 (457)
T ss_pred HHHHHHHhCCCcCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCcCCCccCcCC----ccchHHHHHHHhCeE
Confidence 9999999999999999999999999999999999999999997666677899999999986 357999999999999
Q ss_pred EEEEcC
Q 005047 690 WILRGN 695 (716)
Q Consensus 690 ~v~~~~ 695 (716)
+|+++.
T Consensus 451 ~~~~~~ 456 (457)
T cd07090 451 TVYVEM 456 (457)
T ss_pred EEEEeC
Confidence 998754
No 40
>cd07143 ALDH_AldA_AN0554 Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like. NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD.
Probab=100.00 E-value=2.6e-73 Score=640.09 Aligned_cols=397 Identities=16% Similarity=0.153 Sum_probs=341.3
Q ss_pred HHHhcCCcceeEEecCCccccchhhHHHHHHHHHHHHH-HHh-cCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Q 005047 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSR-RLQ-ALQSQDRRKILLDVADALEANESLIKVENEADVAAAQ 345 (716)
Q Consensus 268 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~-~w~-~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~ 345 (716)
.+|.+|+.++++..++ .+|+++++++|++||+ .|+ ++|.++|.++|++++++|++|+++|++++++|++++.
T Consensus 27 ~~P~t~~~i~~~~~~~------~~~v~~av~~a~~a~~~~W~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~ 100 (481)
T cd07143 27 YNPSTGKLITKIAEAT------EADVDIAVEVAHAAFETDWGLKVSGSKRGRCLSKLADLMERNLDYLASIEALDNGKTF 100 (481)
T ss_pred ECCCCCCEEEEEeCCC------HHHHHHHHHHHHHhhhhhhcccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCh
Confidence 4678899999999888 8899999999999998 599 9999999999999999999999999999887765442
Q ss_pred HhchhHHHHHHhhcCHHHHHHHHHHHHHHhcccccc-cccccccccCCCeEEEEeecceeEEEEEcCC-Cch-hHHHHHH
Q 005047 346 EAGYAKSLVSRLALKPGKISSLAKSIRILADMEEPI-GQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIAS 422 (716)
Q Consensus 346 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~-~P~-~~~~~~~ 422 (716)
. +.. ..|+..+++.+++++.+.+.. |...+. ..+...+++++|+|||++|+|| ||. +.+++++
T Consensus 101 ~----~~~-------~~ev~~~~~~~~~~a~~a~~~~g~~~~~---~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~ 166 (481)
T cd07143 101 G----TAK-------RVDVQASADTFRYYGGWADKIHGQVIET---DIKKLTYTRHEPIGVCGQIIPWNFPLLMCAWKIA 166 (481)
T ss_pred H----HHH-------HHHHHHHHHHHHHHHHHHHHhcCccccC---CCCceEEEEEecceeEEEECCCcChHHHHHHHHH
Confidence 1 110 235777777888877655432 333221 1234567889999999999998 696 4689999
Q ss_pred HHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CchHHHhhcCCCCccEEEeecCHHHHHHHHHh
Q 005047 423 LAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKES 500 (716)
Q Consensus 423 ~ALaaGNtvv~Kps~~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~ 500 (716)
|||++||+||+|||+.||+++.++++++.+ + ||+|++|+|+| +.++++.|..||+||+|+||||+.+|+.|++.
T Consensus 167 ~ALaaGN~VvlKps~~~p~~~~~l~~~l~~----aGlP~g~v~~v~g~~~~~~~~L~~~~~vd~V~fTGs~~~G~~i~~~ 242 (481)
T cd07143 167 PALAAGNTIVLKPSELTPLSALYMTKLIPE----AGFPPGVINVVSGYGRTCGNAISSHMDIDKVAFTGSTLVGRKVMEA 242 (481)
T ss_pred HHHHcCCEEEEeCCCCCcHHHHHHHHHHHh----cCcCcccEEEEeCCchhHHHHHhcCCCCCEEEEECchHHHHHHHHH
Confidence 999999999999999999999999999986 8 99999999996 56788889999999999999999999999887
Q ss_pred cC----CCEEEecCCcceEEEcCCCCHHHHHHHHHHhcCCCCC-ccccccceEEEeCccCChhhHHHHHHHHHhcCC---
Q 005047 501 TK----IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMVETLLVHKDLACNGALNELVVELQHEGV--- 572 (716)
Q Consensus 501 a~----~~~~lElGGk~p~iV~~dADl~~Aa~~iv~~~f~n~g-~C~a~~~rv~V~~~i~dd~f~~~l~~~~~~~~~--- 572 (716)
+. +|+++|||||||+||++|||++.|++.+++|+|.|+| .|+|+ +|||||++|| |+|+++|+++++++.+
T Consensus 243 aa~~~~~~~~lElGG~~p~iV~~dADl~~Aa~~i~~~~~~naGQ~C~a~-~rv~V~~~i~-d~f~~~l~~~~~~~~~G~p 320 (481)
T cd07143 243 AAKSNLKKVTLELGGKSPNIVFDDADLESAVVWTAYGIFFNHGQVCCAG-SRIYVQEGIY-DKFVKRFKEKAKKLKVGDP 320 (481)
T ss_pred HHHhcCCEEEeecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCCCC-cEEEEeHhHH-HHHHHHHHHHHHhcCCCCC
Confidence 63 6999999999999999999999999999999999987 99999 9999999999 7999999999887631
Q ss_pred -------------------------------EE-ecCccc--cc-cc-c-C-----CCCccccccccCceEEEEEeCCHH
Q 005047 573 -------------------------------GL-FGGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVR 610 (716)
Q Consensus 573 -------------------------------~~-~g~~~~--~~-~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~d 610 (716)
++ .|+.+. .+ |+ | | +++++++||+||||++|++|+|+|
T Consensus 321 ~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~ 400 (481)
T cd07143 321 FAEDTFQGPQVSQIQYERIMSYIESGKAEGATVETGGKRHGNEGYFIEPTIFTDVTEDMKIVKEEIFGPVVAVIKFKTEE 400 (481)
T ss_pred CCCCCCCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCCCCCCCceEEeeEEEecCCCCChhhhcCCcCCeEEEEeeCCHH
Confidence 11 133221 23 33 5 2 368899999999999999999999
Q ss_pred HHHHHHHhcCCCceeEEEccCHHHHHHHHHccCcceEEEcCCcCCCCCCcccCcceeeccccccccccccchhcccEEEE
Q 005047 611 AAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRW 690 (716)
Q Consensus 611 eAi~~aN~~~~GL~a~i~t~d~~~a~~~~~~~~~G~v~vN~~~~~~~~~p~g~g~~sG~~~~~~~~~g~~gl~~ft~~k~ 690 (716)
|||+++|+++|||++||||+|.+++.++++++++|+|+||++....+..||||.+.||+| +++|++|+++||+.|+
T Consensus 401 eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G----~~~G~~~l~~~t~~k~ 476 (481)
T cd07143 401 EAIKRANDSTYGLAAAVFTNNINNAIRVANALKAGTVWVNCYNLLHHQVPFGGYKQSGIG----RELGEYALENYTQIKA 476 (481)
T ss_pred HHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCCCCccccccC----cccHHHHHHHHhCeEE
Confidence 999999999999999999999999999999999999999998777778899999999986 3579999999999999
Q ss_pred EEEc
Q 005047 691 ILRG 694 (716)
Q Consensus 691 v~~~ 694 (716)
|+++
T Consensus 477 i~~~ 480 (481)
T cd07143 477 VHIN 480 (481)
T ss_pred EEEe
Confidence 8763
No 41
>cd07097 ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like. Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group.
Probab=100.00 E-value=5.9e-73 Score=637.83 Aligned_cols=397 Identities=20% Similarity=0.193 Sum_probs=339.4
Q ss_pred HHHHh-cCCcceeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Q 005047 267 IIKVL-EGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQ 345 (716)
Q Consensus 267 l~~~~-tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~ 345 (716)
+.+|. +++.++++..++ .+|+++++++|++||+.|+++|.++|.++|++++++|++|+++|++++++|.+++.
T Consensus 18 v~~P~~~~~~i~~~~~~~------~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~ 91 (473)
T cd07097 18 NRNPSDTSDVVGKYARAS------AEDADAAIAAAAAAFPAWRRTSPEARADILDKAGDELEARKEELARLLTREEGKTL 91 (473)
T ss_pred eECCCCCCeEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH
Confidence 46678 489999998888 88999999999999999999999999999999999999999999999887765442
Q ss_pred HhchhHHHHHHhhcCHHHHHHHHHHHHHHhcccc-cccccccccccCCCeEEEEeecceeEEEEEcCC-Cch-hHHHHHH
Q 005047 346 EAGYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIAS 422 (716)
Q Consensus 346 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~-~P~-~~~~~~~ 422 (716)
. ++ ..|+..+++.+++++...+ ..|...+. ...+...+++++|+|||++|+|| ||+ +++++++
T Consensus 92 ~----~a--------~~ev~~~~~~l~~~a~~~~~~~g~~~~~--~~~~~~~~~~~~P~GVv~~I~P~N~Pl~~~~~~i~ 157 (473)
T cd07097 92 P----EA--------RGEVTRAGQIFRYYAGEALRLSGETLPS--TRPGVEVETTREPLGVVGLITPWNFPIAIPAWKIA 157 (473)
T ss_pred H----HH--------HHHHHHHHHHHHHHHHHHHHhcCccccc--CCCCceEEEEEEeeeeEEEEcccChHHHHHHHHHH
Confidence 1 22 2366777777777765432 22322221 11244567899999999999998 696 5679999
Q ss_pred HHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CchHHHhhcCCCCccEEEeecCHHHHHHHHHh
Q 005047 423 LAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKES 500 (716)
Q Consensus 423 ~ALaaGNtvv~Kps~~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~ 500 (716)
|||++||+||+|||+.||+++.++++++.+ + +|+|++|+|+| ++++++.|..||+||+|+||||+++|+.|++.
T Consensus 158 ~ALaaGN~VIlKps~~~p~~~~~l~~~~~~----aGlP~gvv~vv~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~ 233 (473)
T cd07097 158 PALAYGNTVVFKPAELTPASAWALVEILEE----AGLPAGVFNLVMGSGSEVGQALVEHPDVDAVSFTGSTAVGRRIAAA 233 (473)
T ss_pred HHHHcCCEEEEeCCCCCcHHHHHHHHHHHH----cCCCCcceEEeccCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHH
Confidence 999999999999999999999999999986 7 99999999996 56688888899999999999999999999987
Q ss_pred c---CCCEEEecCCcceEEEcCCCCHHHHHHHHHHhcCCCCC-ccccccceEEEeCccCChhhHHHHHHHHHhcCC----
Q 005047 501 T---KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMVETLLVHKDLACNGALNELVVELQHEGV---- 572 (716)
Q Consensus 501 a---~~~~~lElGGk~p~iV~~dADl~~Aa~~iv~~~f~n~g-~C~a~~~rv~V~~~i~dd~f~~~l~~~~~~~~~---- 572 (716)
+ .||++||||||||+||++|||++.|++.+++++|.|+| .|+++ +|+|||+++| |+|+++|+++++++.+
T Consensus 234 aa~~~~~~~lElGGk~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~-~rv~V~~~i~-d~f~~~l~~~~~~~~~g~p~ 311 (473)
T cd07097 234 AAARGARVQLEMGGKNPLVVLDDADLDLAVECAVQGAFFSTGQRCTAS-SRLIVTEGIH-DRFVEALVERTKALKVGDAL 311 (473)
T ss_pred HhccCCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCcCC-eeEEEehhHH-HHHHHHHHHHHHhCCCCCCC
Confidence 7 38999999999999999999999999999999999987 99999 9999999999 7999999999887632
Q ss_pred ------------------------------EE-ecCccc----ccc-c-c-C-----CCCccccccccCceEEEEEeCCH
Q 005047 573 ------------------------------GL-FGGPRA----SKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVDDV 609 (716)
Q Consensus 573 ------------------------------~~-~g~~~~----~~~-~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~ 609 (716)
++ .|+... .++ + | | +++++++||+||||++|++|+|+
T Consensus 312 ~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~ 391 (473)
T cd07097 312 DEGVDIGPVVSERQLEKDLRYIEIARSEGAKLVYGGERLKRPDEGYYLAPALFAGVTNDMRIAREEIFGPVAAVIRVRDY 391 (473)
T ss_pred CCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCCeEEeeEEeccCCCCChhhhCCCcCceEEEeccCCH
Confidence 12 233221 133 3 5 2 35899999999999999999999
Q ss_pred HHHHHHHHhcCCCceeEEEccCHHHHHHHHHccCcceEEEcCCcCC-CCCCcccCcceeeccccccccccccchhcccEE
Q 005047 610 RAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRF-CDGARFGLGAEVGISTSRIHARGPVGVEGLLTT 688 (716)
Q Consensus 610 deAi~~aN~~~~GL~a~i~t~d~~~a~~~~~~~~~G~v~vN~~~~~-~~~~p~g~g~~sG~~~~~~~~~g~~gl~~ft~~ 688 (716)
||||+++|+++|||+++|||+|.++++++++++++|+|+||+++.. .+.+||||.+.||+|. +++|++|+++||+.
T Consensus 392 ~eai~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~~g~v~iN~~~~~~~~~~PfGG~~~SG~G~---~~~g~~~l~~f~~~ 468 (473)
T cd07097 392 DEALAIANDTEFGLSAGIVTTSLKHATHFKRRVEAGVVMVNLPTAGVDYHVPFGGRKGSSYGP---REQGEAALEFYTTI 468 (473)
T ss_pred HHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCcccccCcc---cCCcHHHHHHhhce
Confidence 9999999999999999999999999999999999999999987654 3578999999998861 35699999999999
Q ss_pred EEEE
Q 005047 689 RWIL 692 (716)
Q Consensus 689 k~v~ 692 (716)
|+|+
T Consensus 469 k~v~ 472 (473)
T cd07097 469 KTVY 472 (473)
T ss_pred eEEe
Confidence 9985
No 42
>cd07144 ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like. NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD.
Probab=100.00 E-value=5.4e-73 Score=639.94 Aligned_cols=397 Identities=16% Similarity=0.219 Sum_probs=340.1
Q ss_pred HHHhcCCcceeEEecCCccccchhhHHHHHHHHHHHHHH-HhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Q 005047 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRR-LQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 346 (716)
Q Consensus 268 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~-w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~ 346 (716)
.+|.+|+.++++...+ .+++++++++|++||+. |+++|.++|.++|++++++|++++++|++++.+|.++...
T Consensus 28 ~~P~tg~~i~~~~~~~------~~~v~~ai~~A~~A~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~Gk~~~ 101 (484)
T cd07144 28 VNPSTGEVIASVYAAG------EEDVDKAVKAARKAFESWWSKVTGEERGELLDKLADLVEKNRDLLAAIEALDSGKPYH 101 (484)
T ss_pred ECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHhhHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChH
Confidence 5678899999999888 88999999999999996 8899999999999999999999999999988877654321
Q ss_pred hchhHHHHHHhhcCHHHHHHHHHHHHHHhccccc-ccccccccccCCCeEEEEeecceeEEEEEcCC-Cch-hHHHHHHH
Q 005047 347 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 423 (716)
Q Consensus 347 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~-~P~-~~~~~~~~ 423 (716)
++. ..++..+++.+++++.+.+. .|...+. ..+...+..|+|+|||++|+|| ||. +++++++|
T Consensus 102 ----~~~-------~~ev~~~~~~l~~~~~~~~~~~g~~~~~---~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~ 167 (484)
T cd07144 102 ----SNA-------LGDLDEIIAVIRYYAGWADKIQGKTIPT---SPNKLAYTLHEPYGVCGQIIPWNYPLAMAAWKLAP 167 (484)
T ss_pred ----HHH-------HHHHHHHHHHHHHHHHHHHHhcCceecC---CCCceEEEEEecceEEEEECcCCCHHHHHHHHHHH
Confidence 111 23566677777777654432 2332221 1234567889999999999998 796 47899999
Q ss_pred HHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CchHHHhhcCCCCccEEEeecCHHHHHHHHHhc
Q 005047 424 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST 501 (716)
Q Consensus 424 ALaaGNtvv~Kps~~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a 501 (716)
||++||+||+|||+.||+++..+.+++.+ + +|+|++|+|+| +.++++.|..||+||+|+||||+.+|+.|++.+
T Consensus 168 ALaaGN~VV~Kps~~~p~~~~~l~~~~~~----aglP~gv~~~v~g~~~~~~~~L~~~~~vd~V~fTGS~~~g~~i~~~a 243 (484)
T cd07144 168 ALAAGNTVVIKPAENTPLSLLYFANLVKE----AGFPPGVVNIIPGYGAVAGSALAEHPDVDKIAFTGSTATGRLVMKAA 243 (484)
T ss_pred HHHcCCEEEEECCccchHHHHHHHHHHHH----hCcCCCcEEEEecCCchHHHHHhcCCCcCEEEEECcHHHHHHHHHHH
Confidence 99999999999999999999999999986 7 99999999996 667888899999999999999999999999876
Q ss_pred ---CCCEEEecCCcceEEEcCCCCHHHHHHHHHHhcCCCCC-ccccccceEEEeCccCChhhHHHHHHHHHh-cC-----
Q 005047 502 ---KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMVETLLVHKDLACNGALNELVVELQH-EG----- 571 (716)
Q Consensus 502 ---~~~~~lElGGk~p~iV~~dADl~~Aa~~iv~~~f~n~g-~C~a~~~rv~V~~~i~dd~f~~~l~~~~~~-~~----- 571 (716)
.+|+++|||||||+||++|||++.|++.+++|+|.|+| .|+|+ +|||||+++| |+|+++|++++++ ++
T Consensus 244 ~~~~~~~~lElGGk~p~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~-~rv~V~~~i~-d~f~~~l~~~~~~~~~~G~p~ 321 (484)
T cd07144 244 AQNLKAVTLECGGKSPALVFEDADLDQAVKWAAAGIMYNSGQNCTAT-SRIYVQESIY-DKFVEKFVEHVKQNYKVGSPF 321 (484)
T ss_pred HhcCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCC-ceEEEcHHHH-HHHHHHHHHHHHhhCCcCCCC
Confidence 38999999999999999999999999999999999987 99999 9999999999 7999999999874 32
Q ss_pred -----------------------------CEE-ecCccc-----cccc--c-C-----CCCccccccccCceEEEEEeCC
Q 005047 572 -----------------------------VGL-FGGPRA-----SKLL--Q-I-----PETRLFHHEYNSMVCTVEIVDD 608 (716)
Q Consensus 572 -----------------------------~~~-~g~~~~-----~~~~--p-v-----~~~~~~~eE~FGPVl~v~~~~~ 608 (716)
.++ .|+... .++| | | +++++++||+||||++|++|+|
T Consensus 322 ~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~ 401 (484)
T cd07144 322 DDDTVVGPQVSKTQYDRVLSYIEKGKKEGAKLVYGGEKAPEGLGKGYFIPPTIFTDVPQDMRIVKEEIFGPVVVISKFKT 401 (484)
T ss_pred CCCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCcccCCCCceECCEEEeCCCCCCchhhCCCCCceEEEeccCC
Confidence 122 244321 2333 5 2 3689999999999999999999
Q ss_pred HHHHHHHHHhcCCCceeEEEccCHHHHHHHHHccCcceEEEcCCcCCCCCCcccCcceeeccccccccccccchhcccEE
Q 005047 609 VRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTT 688 (716)
Q Consensus 609 ~deAi~~aN~~~~GL~a~i~t~d~~~a~~~~~~~~~G~v~vN~~~~~~~~~p~g~g~~sG~~~~~~~~~g~~gl~~ft~~ 688 (716)
+||||+++|+++|||++||||+|.+++.+|++++++|+|+||+++...+..||||.++||+| +++|++|+++||+.
T Consensus 402 ~~eai~~~n~~~~gLsa~i~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G----~~~g~~~l~~~t~~ 477 (484)
T cd07144 402 YEEAIKKANDTTYGLAAAVFTKDIRRAHRVARELEAGMVWINSSNDSDVGVPFGGFKMSGIG----RELGEYGLETYTQT 477 (484)
T ss_pred HHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcCEEEECCCCCCCCCCCcCCcccCcCC----CCchHHHHHHhhce
Confidence 99999999999999999999999999999999999999999998766677899999999986 35699999999999
Q ss_pred EEEEEc
Q 005047 689 RWILRG 694 (716)
Q Consensus 689 k~v~~~ 694 (716)
|+|.++
T Consensus 478 k~v~~~ 483 (484)
T cd07144 478 KAVHIN 483 (484)
T ss_pred EEEEEe
Confidence 999764
No 43
>cd07110 ALDH_F10_BADH Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like. Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine.
Probab=100.00 E-value=6.6e-73 Score=635.39 Aligned_cols=395 Identities=18% Similarity=0.217 Sum_probs=335.8
Q ss_pred HHHhcCCcceeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHh
Q 005047 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 347 (716)
Q Consensus 268 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~ 347 (716)
.+|++|+.++++...+ .+++++++++|++||++|+++|.++|.++|++++++|++|+++|++++.+|.++..
T Consensus 2 ~~P~t~~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~-- 73 (456)
T cd07110 2 INPATEATIGEIPAAT------AEDVDAAVRAARRAFPRWKKTTGAERAKYLRAIAEGVRERREELAELEARDNGKPL-- 73 (456)
T ss_pred cCCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH--
Confidence 3578899999998888 88999999999999999999999999999999999999999999999887765432
Q ss_pred chhHHHHHHhhcCHHHHHHHHHHHHHHhcccccc----cccccccccCCCeEEEEeecceeEEEEEcCC-Cch-hHHHHH
Q 005047 348 GYAKSLVSRLALKPGKISSLAKSIRILADMEEPI----GQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIA 421 (716)
Q Consensus 348 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~-~P~-~~~~~~ 421 (716)
.++. .|+...++.+++++...+.. +...+. ...+...+++++|+|||++|+|| ||. +.++++
T Consensus 74 --~~a~--------~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~ 141 (456)
T cd07110 74 --DEAA--------WDVDDVAGCFEYYADLAEQLDAKAERAVPL--PSEDFKARVRREPVGVVGLITPWNFPLLMAAWKV 141 (456)
T ss_pred --HHHH--------HHHHHHHHHHHHHHHHHHHhhccCCccccC--CCCCceeEEEEecceeEEEECCCChHHHHHHHHH
Confidence 1221 24555555555554332211 111111 11244568889999999999998 696 567899
Q ss_pred HHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CchHHHhhcCCCCccEEEeecCHHHHHHHHH
Q 005047 422 SLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKE 499 (716)
Q Consensus 422 ~~ALaaGNtvv~Kps~~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~ 499 (716)
++||++||+||+|||+.||+++..+++++.+ + +|+|++|+|+| ++++++.|..||+||+|+||||+++|+.|++
T Consensus 142 ~~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~----aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~ 217 (456)
T cd07110 142 APALAAGCTVVLKPSELTSLTELELAEIAAE----AGLPPGVLNVVTGTGDEAGAPLAAHPGIDKISFTGSTATGSQVMQ 217 (456)
T ss_pred HHHHHcCCEEEEECcccchHHHHHHHHHHHH----cCCCCCcEEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHH
Confidence 9999999999999999999999999999986 8 99999999996 5668888889999999999999999999998
Q ss_pred hcC---CCEEEecCCcceEEEcCCCCHHHHHHHHHHhcCCCCC-ccccccceEEEeCccCChhhHHHHHHHHHhcC----
Q 005047 500 STK---IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMVETLLVHKDLACNGALNELVVELQHEG---- 571 (716)
Q Consensus 500 ~a~---~~~~lElGGk~p~iV~~dADl~~Aa~~iv~~~f~n~g-~C~a~~~rv~V~~~i~dd~f~~~l~~~~~~~~---- 571 (716)
+++ +|+++|||||||+||++|||+|.|++.+++|+|.|+| .|+++ +|+|||+++| |+|+++|+++++++.
T Consensus 218 ~aa~~~~~~~lElgG~~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~-~rv~V~~~i~-d~f~~~l~~~~~~~~~g~p 295 (456)
T cd07110 218 AAAQDIKPVSLELGGKSPIIVFDDADLEKAVEWAMFGCFWNNGQICSAT-SRLLVHESIA-DAFLERLATAAEAIRVGDP 295 (456)
T ss_pred HHhhcCCeEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCCCC-ceEEEcHHHH-HHHHHHHHHHHHhcCCCCC
Confidence 874 8999999999999999999999999999999999987 99999 9999999999 799999999987652
Q ss_pred ------------------------------CEE-ecCccc----cccc--c-C-----CCCccccccccCceEEEEEeCC
Q 005047 572 ------------------------------VGL-FGGPRA----SKLL--Q-I-----PETRLFHHEYNSMVCTVEIVDD 608 (716)
Q Consensus 572 ------------------------------~~~-~g~~~~----~~~~--p-v-----~~~~~~~eE~FGPVl~v~~~~~ 608 (716)
.++ .|+... .++| | | ++|++++||+||||++|++|+|
T Consensus 296 ~~~~~~~Gpli~~~~~~~~~~~v~~a~~~Ga~~~~gg~~~~~~~~~~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~ 375 (456)
T cd07110 296 LEEGVRLGPLVSQAQYEKVLSFIARGKEEGARLLCGGRRPAHLEKGYFIAPTVFADVPTDSRIWREEIFGPVLCVRSFAT 375 (456)
T ss_pred CCCCCCcCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCCcccccCCCCcCCCEEEecCCCCChHhhCCCcCCeEEEEecCC
Confidence 122 233321 2333 5 2 3588999999999999999999
Q ss_pred HHHHHHHHHhcCCCceeEEEccCHHHHHHHHHccCcceEEEcCCcCCCCCCcccCcceeeccccccccccccchhcccEE
Q 005047 609 VRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTT 688 (716)
Q Consensus 609 ~deAi~~aN~~~~GL~a~i~t~d~~~a~~~~~~~~~G~v~vN~~~~~~~~~p~g~g~~sG~~~~~~~~~g~~gl~~ft~~ 688 (716)
+||||+++|+++|||++||||+|.+++.++++++++|+|+||+++...+..||||.+.||+| +++|++|+++||+.
T Consensus 376 ~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G----~~~g~~~l~~~~~~ 451 (456)
T cd07110 376 EDEAIALANDSEYGLAAAVISRDAERCDRVAEALEAGIVWINCSQPCFPQAPWGGYKRSGIG----RELGEWGLDNYLEV 451 (456)
T ss_pred HHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCcccccCC----ccchHHHHHHhcce
Confidence 99999999999999999999999999999999999999999987666677899999999886 35699999999999
Q ss_pred EEEE
Q 005047 689 RWIL 692 (716)
Q Consensus 689 k~v~ 692 (716)
|+|+
T Consensus 452 k~i~ 455 (456)
T cd07110 452 KQIT 455 (456)
T ss_pred eEEe
Confidence 9985
No 44
>cd07152 ALDH_BenzADH NAD-dependent benzaldehyde dehydrogenase II-like. NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids.
Probab=100.00 E-value=9.3e-73 Score=631.95 Aligned_cols=391 Identities=19% Similarity=0.223 Sum_probs=333.0
Q ss_pred CCcceeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhchhHH
Q 005047 273 GKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKS 352 (716)
Q Consensus 273 g~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~g~~~~ 352 (716)
|+.++++..++ .+++++++++|++||+.|+++|.++|.++|++++++|++|+++|++++++|+++... ++
T Consensus 1 ~~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~----~a 70 (443)
T cd07152 1 GAVLGEVGVAD------AADVDRAAARAAAAQRAWAATPPRERAAVLRRAADLLEEHADEIADWIVRESGSIRP----KA 70 (443)
T ss_pred CCEEEEEcCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHH----HH
Confidence 35678888778 889999999999999999999999999999999999999999999998877654321 11
Q ss_pred HHHHhhcCHHHHHHHHHHHHHHhcccc-cccccccccccCCCeEEEEeecceeEEEEEcCC-Cch-hHHHHHHHHHHhCC
Q 005047 353 LVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGN 429 (716)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~-~P~-~~~~~~~~ALaaGN 429 (716)
..|+..+++.+++++.+.+ +.+...+. ..+...+.+|+|+|||++|+|| ||. +.+++++|||++||
T Consensus 71 --------~~ev~~~i~~l~~~~~~~~~~~~~~~~~---~~g~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN 139 (443)
T cd07152 71 --------GFEVGAAIGELHEAAGLPTQPQGEILPS---APGRLSLARRVPLGVVGVISPFNFPLILAMRSVAPALALGN 139 (443)
T ss_pred --------HHHHHHHHHHHHHHHHhHHHhCCccccc---cCCceeEEEEecceEEEEECCCCcHHHHHHHHHHHHHHcCC
Confidence 2367778888887765432 33433221 1344567889999999999998 696 56899999999999
Q ss_pred EEEEeCCcchHHHH-HHHHHHHHHhcccc-cCcCceEEecCCchHHHhhcCCCCccEEEeecCHHHHHHHHHhcC---CC
Q 005047 430 GLLLKGGKEAMRSN-AILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK---IP 504 (716)
Q Consensus 430 tvv~Kps~~tp~t~-~~l~~l~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a~---~~ 504 (716)
+||+|||++||.++ .++++++.+ + +|+|++|+|+|+.+++..|..||++|+|+||||+.+|+.|++++. +|
T Consensus 140 ~VvlKps~~~p~~~~~~l~~~~~~----ag~P~gvv~~v~g~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~ 215 (443)
T cd07152 140 AVVLKPDPRTPVSGGVVIARLFEE----AGLPAGVLHVLPGGADAGEALVEDPNVAMISFTGSTAVGRKVGEAAGRHLKK 215 (443)
T ss_pred EEEEECCcccchhHHHHHHHHHHH----hCcCcCcEEEecCChHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCc
Confidence 99999999999996 788899886 7 999999999976567888889999999999999999999988763 89
Q ss_pred EEEecCCcceEEEcCCCCHHHHHHHHHHhcCCCCC-ccccccceEEEeCccCChhhHHHHHHHHHhcCC-----------
Q 005047 505 VLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMVETLLVHKDLACNGALNELVVELQHEGV----------- 572 (716)
Q Consensus 505 ~~lElGGk~p~iV~~dADl~~Aa~~iv~~~f~n~g-~C~a~~~rv~V~~~i~dd~f~~~l~~~~~~~~~----------- 572 (716)
+++|||||||+||++|||+|.|++.+++++|.|+| .|+++ +|+|||+++| |+|+++|+++++++.+
T Consensus 216 ~~lElGGk~~~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~-~rv~V~~~i~-~~f~~~l~~~~~~~~~g~p~~~~~~~g 293 (443)
T cd07152 216 VSLELGGKNALIVLDDADLDLAASNGAWGAFLHQGQICMAA-GRHLVHESVA-DAYTAKLAAKAKHLPVGDPATGQVALG 293 (443)
T ss_pred EEEECCCCCeEEECCCCCHHHHHHHHHHHHHhhcCCCCcCC-eeEEEcHHHH-HHHHHHHHHHHHhCCCCCCCCCCCCcC
Confidence 99999999999999999999999999999999987 99999 9999999999 7999999999987632
Q ss_pred -----------------------EE-ecCccccccc-c-C-----CCCccccccccCceEEEEEeCCHHHHHHHHHhcCC
Q 005047 573 -----------------------GL-FGGPRASKLL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGS 621 (716)
Q Consensus 573 -----------------------~~-~g~~~~~~~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~ 621 (716)
++ .|+.....++ | | ++|++++||+||||++|++|+|+||||+++|+++|
T Consensus 294 pli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~ 373 (443)
T cd07152 294 PLINARQLDRVHAIVDDSVAAGARLEAGGTYDGLFYRPTVLSGVKPGMPAFDEEIFGPVAPVTVFDSDEEAVALANDTEY 373 (443)
T ss_pred CCcCHHHHHHHHHHHHHHHhCCCEEEeccCcCCEEEcCEEEecCCCCChhhhccccCCeEEEEeeCCHHHHHHHHhCCCc
Confidence 11 1222111133 5 2 46899999999999999999999999999999999
Q ss_pred CceeEEEccCHHHHHHHHHccCcceEEEcCCcCCC-CCCcccCcceeeccccccccccccchhcccEEEEEEE
Q 005047 622 AHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFC-DGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILR 693 (716)
Q Consensus 622 GL~a~i~t~d~~~a~~~~~~~~~G~v~vN~~~~~~-~~~p~g~g~~sG~~~~~~~~~g~~gl~~ft~~k~v~~ 693 (716)
||++||||+|.++++++++++++|.|+||+++... +..||||.+.||+|. +++|++|+++||+.|++++
T Consensus 374 gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~pfGG~~~SG~G~---~~~g~~~l~~~~~~k~~~~ 443 (443)
T cd07152 374 GLSAGIISRDVGRAMALADRLRTGMLHINDQTVNDEPHNPFGGMGASGNGS---RFGGPANWEEFTQWQWVTV 443 (443)
T ss_pred cceEEEECCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCcccccCCC---ccCcHHHHHHhhceeEEeC
Confidence 99999999999999999999999999999876554 568999999998752 3468999999999999853
No 45
>PLN00412 NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional
Probab=100.00 E-value=1.2e-72 Score=636.30 Aligned_cols=403 Identities=18% Similarity=0.189 Sum_probs=334.8
Q ss_pred HHHHhcCCcceeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Q 005047 267 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 346 (716)
Q Consensus 267 l~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~ 346 (716)
+.+|.+|+.++++..++ .+|+++++++|++||++|+.++..+|.++|++++++|++|+++|++++++|++++..
T Consensus 35 ~~~P~t~~~i~~~~~a~------~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~el~~~~~~e~Gk~~~ 108 (496)
T PLN00412 35 ITNPSTRKTQYKVQACT------QEEVNKAMESAKAAQKAWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAK 108 (496)
T ss_pred eECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH
Confidence 46788999999988888 889999999999999999999999999999999999999999999999988876542
Q ss_pred hchhHHHHHHhhcCHHHHHHHHHHHHHHhcccccccccccc---cccCCCeEEEEeecceeEEEEEcCC-Cch-hHHHHH
Q 005047 347 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEPIGQILKR---TELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIA 421 (716)
Q Consensus 347 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~---~~~~~~~~~~~~~~PlGVv~~I~p~-~P~-~~~~~~ 421 (716)
++. .++......+++.++....+.. .+...+. +....+...+++|+|+|||++|+|| ||. ++++++
T Consensus 109 ----~a~-~Ev~~~~~~l~~~a~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i 179 (496)
T PLN00412 109 ----DAV-TEVVRSGDLISYTAEEGVRILG----EGKFLVSDSFPGNERNKYCLTSKIPLGVVLAIPPFNYPVNLAVSKI 179 (496)
T ss_pred ----HHH-HHHHHHHHHHHHHHHHHHHHhc----CCcccccccCCCccCCceeEEEEecceEEEEECCCCchHHHHHHHH
Confidence 222 1222222333333333322211 0111110 0001123456889999999999998 685 678999
Q ss_pred HHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CchHHHhhcCCCCccEEEeecCHHHHHHHHH
Q 005047 422 SLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKE 499 (716)
Q Consensus 422 ~~ALaaGNtvv~Kps~~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~ 499 (716)
+|||++||+||+|||+.||.++..+++++.+ + +|+|++|+|++ +.+++++|..||+||+|+|||| .+|+.|++
T Consensus 180 ~~ALaaGN~VIlKPs~~t~~~~~~l~~~l~~----aglP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs-~~g~~v~~ 254 (496)
T PLN00412 180 APALIAGNAVVLKPPTQGAVAALHMVHCFHL----AGFPKGLISCVTGKGSEIGDFLTMHPGVNCISFTGG-DTGIAISK 254 (496)
T ss_pred HHHHHcCCEEEEECCccCcHHHHHHHHHHHH----hCCCcccEEEEecCchHHHHHHhcCCCcCEEEEeCh-HHHHHHHH
Confidence 9999999999999999999999999999986 7 99999999996 5678899999999999999999 99999998
Q ss_pred hcC-CCEEEecCCcceEEEcCCCCHHHHHHHHHHhcCCCCC-ccccccceEEEeCccCChhhHHHHHHHHHhcCCE----
Q 005047 500 STK-IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMVETLLVHKDLACNGALNELVVELQHEGVG---- 573 (716)
Q Consensus 500 ~a~-~~~~lElGGk~p~iV~~dADl~~Aa~~iv~~~f~n~g-~C~a~~~rv~V~~~i~dd~f~~~l~~~~~~~~~~---- 573 (716)
++. +|+++|||||||+||++|||+|.|++.+++++|.|+| .|+|+ +|+|||++|| |+|+++|+++++++.+.
T Consensus 255 ~a~~~~~~lElGG~~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~-~rv~V~~~i~-d~f~~~l~~~~~~~~~g~p~~ 332 (496)
T PLN00412 255 KAGMVPLQMELGGKDACIVLEDADLDLAAANIIKGGFSYSGQRCTAV-KVVLVMESVA-DALVEKVNAKVAKLTVGPPED 332 (496)
T ss_pred HhCCCcEEEEcCCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCCccC-eEEEEcHHHH-HHHHHHHHHHHHhCccCCCcc
Confidence 874 8999999999999999999999999999999999987 99999 9999999999 79999999998876421
Q ss_pred -----------------------------Ee-cCccccccc-c-C-----CCCccccccccCceEEEEEeCCHHHHHHHH
Q 005047 574 -----------------------------LF-GGPRASKLL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHI 616 (716)
Q Consensus 574 -----------------------------~~-g~~~~~~~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~a 616 (716)
++ ++.....|+ | | +++++++||+||||++|++|+|+||||+++
T Consensus 333 ~~~~gp~i~~~~~~~v~~~i~~a~~~Ga~~l~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~~deai~~a 412 (496)
T PLN00412 333 DCDITPVVSESSANFIEGLVMDAKEKGATFCQEWKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHC 412 (496)
T ss_pred cCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEecCCCCCeEEecEEEeCCCCCCHHHhCcCCCCeEEEEEeCCHHHHHHHH
Confidence 11 111111122 5 2 468999999999999999999999999999
Q ss_pred HhcCCCceeEEEccCHHHHHHHHHccCcceEEEcCCcC-CCCCCcccCcceeeccccccccccccchhcccEEEEEEEcC
Q 005047 617 HQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTR-FCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGN 695 (716)
Q Consensus 617 N~~~~GL~a~i~t~d~~~a~~~~~~~~~G~v~vN~~~~-~~~~~p~g~g~~sG~~~~~~~~~g~~gl~~ft~~k~v~~~~ 695 (716)
|+++|||++||||+|.+++++|++++++|+|+||++.. ..+.+||||.+.||+| +++|++|+++||+.|+++++.
T Consensus 413 n~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~~~PfGG~k~SG~G----~~~g~~~~~~ft~~k~i~~~~ 488 (496)
T PLN00412 413 NASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPARGPDHFPFQGLKDSGIG----SQGITNSINMMTKVKSTVINL 488 (496)
T ss_pred hCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCCCCccccccC----CCChHHHHHHhcceEEEEEec
Confidence 99999999999999999999999999999999999754 3457899999999986 346899999999999998764
No 46
>cd07147 ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1-like. Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD.
Probab=100.00 E-value=9.9e-73 Score=633.63 Aligned_cols=398 Identities=22% Similarity=0.253 Sum_probs=334.6
Q ss_pred HHHhcCCcceeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHh
Q 005047 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 347 (716)
Q Consensus 268 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~ 347 (716)
.+|.+|+.++++..++ .+++++++++|++||+.|+++|.++|.++|++++++|++|+++|++++.+|.+++.
T Consensus 4 ~~P~t~~~~~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~-- 75 (452)
T cd07147 4 TNPYTGEVVARVALAG------PDDIEEAIAAAVKAFRPMRALPAHRRAAILLHCVARLEERFEELAETIVLEAGKPI-- 75 (452)
T ss_pred cCCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH--
Confidence 5678999999998888 88999999999999999999999999999999999999999999998877665432
Q ss_pred chhHHHHHHhhcCHHHHHHHHHHHHHHhcccc-cccccccccc--cCCCeEEEEeecceeEEEEEcCC-Cch-hHHHHHH
Q 005047 348 GYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTE--LADGLILEKTSCPLGVLLIVFES-RPD-ALVQIAS 422 (716)
Q Consensus 348 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~--~~~~~~~~~~~~PlGVv~~I~p~-~P~-~~~~~~~ 422 (716)
.++. .|+...+..+++++.... ..++..+... ...+...+++++|+|||++|+|| ||. +.+++++
T Consensus 76 --~~a~--------~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~ 145 (452)
T cd07147 76 --KDAR--------GEVARAIDTFRIAAEEATRIYGEVLPLDISARGEGRQGLVRRFPIGPVSAITPFNFPLNLVAHKVA 145 (452)
T ss_pred --HHHH--------HHHHHHHHHHHHHHHHHHHhCCcccccccccCCCCceeEEEEeceeEEEEEcCCCcHHHHHHHHHH
Confidence 1221 245555555555543221 1122211100 01234567789999999999998 685 5789999
Q ss_pred HHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecCCchHHHhhcCCCCccEEEeecCHHHHHHHHHhc
Q 005047 423 LAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST 501 (716)
Q Consensus 423 ~ALaaGNtvv~Kps~~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a 501 (716)
+||++||+||+|||+.+|+++.+|++++++ + +|+|+||+|+++.+.+..|..||++|+|+||||+++|+.|++.+
T Consensus 146 ~ALaaGN~VIlKps~~~p~~~~~l~~~l~~----ag~P~g~v~~v~g~~~~~~~l~~~~~v~~v~fTGs~~~g~~v~~~a 221 (452)
T cd07147 146 PAIAAGCPFVLKPASRTPLSALILGEVLAE----TGLPKGAFSVLPCSRDDADLLVTDERIKLLSFTGSPAVGWDLKARA 221 (452)
T ss_pred HHHHcCCEEEEECCCCCcHHHHHHHHHHHH----cCCCcCcEEEEeCCccchhHHhcCCCCCEEEEECCHHHHHHHHHHh
Confidence 999999999999999999999999999986 7 99999999996555677888899999999999999999999886
Q ss_pred C-CCEEEecCCcceEEEcCCCCHHHHHHHHHHhcCCCCC-ccccccceEEEeCccCChhhHHHHHHHHHhcCC-------
Q 005047 502 K-IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMVETLLVHKDLACNGALNELVVELQHEGV------- 572 (716)
Q Consensus 502 ~-~~~~lElGGk~p~iV~~dADl~~Aa~~iv~~~f~n~g-~C~a~~~rv~V~~~i~dd~f~~~l~~~~~~~~~------- 572 (716)
+ +|+++|||||||+||++|||+|.|++.+++++|.|+| .|+++ +|+|||+++| |+|+++|+++++++..
T Consensus 222 ~~~~v~lelgG~~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~-~~v~V~~~i~-d~f~~~L~~~~~~~~~g~p~~~~ 299 (452)
T cd07147 222 GKKKVVLELGGNAAVIVDSDADLDFAAQRIIFGAFYQAGQSCISV-QRVLVHRSVY-DEFKSRLVARVKALKTGDPKDDA 299 (452)
T ss_pred CcCceEeecCCCCcEEECCCCCHHHHHHHHHHHHHhccCCCCcCC-cEEEEchhHH-HHHHHHHHHHHHhCCCCCCCCCC
Confidence 4 8999999999999999999999999999999999987 99999 9999999999 7999999999987632
Q ss_pred ---------------------------EEe-cCccccccc-c-C-----CCCccccccccCceEEEEEeCCHHHHHHHHH
Q 005047 573 ---------------------------GLF-GGPRASKLL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIH 617 (716)
Q Consensus 573 ---------------------------~~~-g~~~~~~~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN 617 (716)
+++ |+.....|+ | | +++++++||+||||++|++|+|+||||+++|
T Consensus 300 ~~~gpli~~~~~~~~~~~i~~a~~~Ga~~l~gg~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~n 379 (452)
T cd07147 300 TDVGPMISESEAERVEGWVNEAVDAGAKLLTGGKRDGALLEPTILEDVPPDMEVNCEEVFGPVVTVEPYDDFDEALAAVN 379 (452)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHCCCEEEecCCcCCEEEcCEEEeCCCCCChHHhCcCcCCeEEEEEeCCHHHHHHHHh
Confidence 111 222211233 5 2 3689999999999999999999999999999
Q ss_pred hcCCCceeEEEccCHHHHHHHHHccCcceEEEcCCcCC-CCCCcccCcceeeccccccccccccchhcccEEEEEEE
Q 005047 618 QHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRF-CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILR 693 (716)
Q Consensus 618 ~~~~GL~a~i~t~d~~~a~~~~~~~~~G~v~vN~~~~~-~~~~p~g~g~~sG~~~~~~~~~g~~gl~~ft~~k~v~~ 693 (716)
+++|||++||||+|.++++++++++++|+|+||+++.. .+..||||.++||+| +++|++|+++||+.|+|++
T Consensus 380 ~~~~gL~~~v~t~d~~~a~~~~~~~~~G~v~vN~~~~~~~~~~pfGG~~~SG~G----~~~g~~~~~~~~~~k~i~~ 452 (452)
T cd07147 380 DSKFGLQAGVFTRDLEKALRAWDELEVGGVVINDVPTFRVDHMPYGGVKDSGIG----REGVRYAIEEMTEPRLLVI 452 (452)
T ss_pred CCCCCceEEEECCCHHHHHHHHHHcCcceEEECCCCCCCCCCCCcCCccccccC----CCChHHHHHHhcceeEEeC
Confidence 99999999999999999999999999999999987654 467899999999986 3579999999999999864
No 47
>cd07145 ALDH_LactADH_F420-Bios Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like. NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD.
Probab=100.00 E-value=1.1e-72 Score=633.73 Aligned_cols=398 Identities=19% Similarity=0.251 Sum_probs=337.3
Q ss_pred HHHhcCCcceeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHh
Q 005047 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 347 (716)
Q Consensus 268 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~ 347 (716)
.+|.+++.++++...+ .+|+++++++|++||+.|+++|.++|.++|++++++|++|+++|++++.+|.+++..
T Consensus 4 ~~P~t~~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~- 76 (456)
T cd07145 4 RNPANGEVIDTVPSLS------REEVREAIEVAEKAKDVMSNLPAYKRYKILMKVAELIERRKEELAKLLTIEVGKPIK- 76 (456)
T ss_pred cCCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHH-
Confidence 4678899999998888 889999999999999999999999999999999999999999999998877654321
Q ss_pred chhHHHHHHhhcCHHHHHHHHHHHHHHhcccc-cccccccccc--cCCCeEEEEeecceeEEEEEcCC-Cch-hHHHHHH
Q 005047 348 GYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTE--LADGLILEKTSCPLGVLLIVFES-RPD-ALVQIAS 422 (716)
Q Consensus 348 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~--~~~~~~~~~~~~PlGVv~~I~p~-~P~-~~~~~~~ 422 (716)
++ ..|+..+++.+++++...+ ..++..+... ...+...+++++|+|||++|+|| ||. +.+++++
T Consensus 77 ---~a--------~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~ 145 (456)
T cd07145 77 ---QS--------RVEVERTIRLFKLAAEEAKVLRGETIPVDAYEYNERRIAFTVREPIGVVGAITPFNFPANLFAHKIA 145 (456)
T ss_pred ---HH--------HHHHHHHHHHHHHHHHHHHHhcCccccCccccccCCceeEEEEecceeEEEECCCChHHHHHHHHHH
Confidence 22 2356666666776654322 1222211100 01134567889999999999998 686 5679999
Q ss_pred HHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CchHHHhhcCCCCccEEEeecCHHHHHHHHHh
Q 005047 423 LAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKES 500 (716)
Q Consensus 423 ~ALaaGNtvv~Kps~~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~ 500 (716)
+||++||+||+|||+.||+|+.++++++++ + +|+|++|+|+| ++++++.|..||++++|+||||+++|+.|++.
T Consensus 146 ~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~----ag~p~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~ 221 (456)
T cd07145 146 PAIAVGNSVVVKPSSNTPLTAIELAKILEE----AGLPPGVINVVTGYGSEVGDEIVTNPKVNMISFTGSTAVGLLIASK 221 (456)
T ss_pred HHHHcCCEEEEECCccchHHHHHHHHHHHH----cCCCcccEEEEeCCCchHHHHHhcCCCCCEEEEECCHHHHHHHHHH
Confidence 999999999999999999999999999986 7 99999999996 57788888899999999999999999999988
Q ss_pred cC---CCEEEecCCcceEEEcCCCCHHHHHHHHHHhcCCCCC-ccccccceEEEeCccCChhhHHHHHHHHHhcCC----
Q 005047 501 TK---IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMVETLLVHKDLACNGALNELVVELQHEGV---- 572 (716)
Q Consensus 501 a~---~~~~lElGGk~p~iV~~dADl~~Aa~~iv~~~f~n~g-~C~a~~~rv~V~~~i~dd~f~~~l~~~~~~~~~---- 572 (716)
+. +|+++|||||||+||++|||++.|++.+++++|.|+| .|+++ +|+|||+++| |+|+++|+++++++.+
T Consensus 222 aa~~~~~v~lElgG~n~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~-~rv~V~~~i~-d~f~~~l~~~~~~~~~g~p~ 299 (456)
T cd07145 222 AGGTGKKVALELGGSDPMIVLKDADLERAVSIAVRGRFENAGQVCNAV-KRILVEEEVY-DKFLKLLVEKVKKLKVGDPL 299 (456)
T ss_pred HhhcCCceEEecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCccC-eeEEEcHHHH-HHHHHHHHHHHhcCCcCCCC
Confidence 74 9999999999999999999999999999999999987 99999 9999999999 7999999999887531
Q ss_pred ------------------------------EE-ecCccccc-cc-c-C-----CCCccccccccCceEEEEEeCCHHHHH
Q 005047 573 ------------------------------GL-FGGPRASK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAI 613 (716)
Q Consensus 573 ------------------------------~~-~g~~~~~~-~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi 613 (716)
++ .|+....+ ++ | | +++++++||+||||++|++|+|+||||
T Consensus 300 ~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~vl~gg~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai 379 (456)
T cd07145 300 DESTDLGPLISPEAVERMENLVNDAVEKGGKILYGGKRDEGSFFPPTVLENDTPDMIVMKEEVFGPVLPIAKVKDDEEAV 379 (456)
T ss_pred CCCCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCeEECCEeecCCCCCChHhhCCCCCceEEEEEECCHHHHH
Confidence 11 23322213 33 5 2 368999999999999999999999999
Q ss_pred HHHHhcCCCceeEEEccCHHHHHHHHHccCcceEEEcCCcCC-CCCCcccCcceeeccccccccccccchhcccEEEEEE
Q 005047 614 DHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRF-CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 692 (716)
Q Consensus 614 ~~aN~~~~GL~a~i~t~d~~~a~~~~~~~~~G~v~vN~~~~~-~~~~p~g~g~~sG~~~~~~~~~g~~gl~~ft~~k~v~ 692 (716)
+++|+++|||++||||+|.+++.++++++++|.|+||+.... .+.+||||.+.||+| +++|++|+++|++.|+|.
T Consensus 380 ~~~n~~~~gL~~~v~t~d~~~~~~~~~~~~~g~v~vN~~~~~~~~~~pfgG~~~SG~G----~~~g~~~l~~f~~~k~v~ 455 (456)
T cd07145 380 EIANSTEYGLQASVFTNDINRALKVARELEAGGVVINDSTRFRWDNLPFGGFKKSGIG----REGVRYTMLEMTEEKTIV 455 (456)
T ss_pred HHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCcccccCC----cCchHHHHHHhhceeEEe
Confidence 999999999999999999999999999999999999987644 357899999999986 356999999999999985
Q ss_pred E
Q 005047 693 R 693 (716)
Q Consensus 693 ~ 693 (716)
+
T Consensus 456 ~ 456 (456)
T cd07145 456 I 456 (456)
T ss_pred C
Confidence 3
No 48
>cd07101 ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like. Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s).
Probab=100.00 E-value=9.3e-73 Score=633.49 Aligned_cols=395 Identities=17% Similarity=0.177 Sum_probs=329.9
Q ss_pred HHhcCCcceeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhc
Q 005047 269 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAG 348 (716)
Q Consensus 269 ~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~g 348 (716)
+|.||+.++++..++ .+|+++++++|++||+.|+++|.++|.++|++++++|++|+++|++++.+|++++..
T Consensus 2 ~P~tg~~i~~~~~~~------~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~-- 73 (454)
T cd07101 2 APFTGEPLGELPQST------PADVEAAFARARAAQRAWAARPFAERAAVFLRFHDLVLERRDELLDLIQLETGKARR-- 73 (454)
T ss_pred cCCCCCEEEEEcCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHH--
Confidence 578999999998888 899999999999999999999999999999999999999999999999888765532
Q ss_pred hhHHHHHHhhcCHHHHHHHHHHHHHHhccccc-ccccccccccCCCeEEEEeecceeEEEEEcCC-Cch-hHHHHHHHHH
Q 005047 349 YAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAI 425 (716)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~-~P~-~~~~~~~~AL 425 (716)
++. .|+...+..+++++...+. .+........+.....+.+++|+|||++|+|| ||. ++++++++||
T Consensus 74 --~a~--------~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~AL 143 (454)
T cd07101 74 --HAF--------EEVLDVAIVARYYARRAERLLKPRRRRGAIPVLTRTTVNRRPKGVVGVISPWNYPLTLAVSDAIPAL 143 (454)
T ss_pred --HHH--------HHHHHHHHHHHHHHHHHHHHhCCccccccCCCCceEEEEEEeccEEEEECCCccHHHHHHHHHHHHH
Confidence 221 2344444444444432211 11110000001123567889999999999998 695 6789999999
Q ss_pred HhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CchHHHhhcCCCCccEEEeecCHHHHHHHHHhcC-
Q 005047 426 RSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK- 502 (716)
Q Consensus 426 aaGNtvv~Kps~~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a~- 502 (716)
++||+||+|||+.||+|+.++++++.+ + +|+|++|+|+| +.+++..|..| +|+|+||||+++|+.|++.++
T Consensus 144 aaGN~vvlKps~~~p~~~~~l~~~~~~----aglP~gv~~~v~g~~~~~~~~l~~~--~~~V~fTGs~~~g~~i~~~aa~ 217 (454)
T cd07101 144 LAGNAVVLKPDSQTALTALWAVELLIE----AGLPRDLWQVVTGPGSEVGGAIVDN--ADYVMFTGSTATGRVVAERAGR 217 (454)
T ss_pred HcCCEEEEECCccchHHHHHHHHHHHH----cCcCCCcEEEEeCCcHHHHHHHHhC--CCEEEEECCHHHHHHHHHHHHh
Confidence 999999999999999999999999986 7 99999999996 56677877776 689999999999999998773
Q ss_pred --CCEEEecCCcceEEEcCCCCHHHHHHHHHHhcCCCCC-ccccccceEEEeCccCChhhHHHHHHHHHhcCC-------
Q 005047 503 --IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMVETLLVHKDLACNGALNELVVELQHEGV------- 572 (716)
Q Consensus 503 --~~~~lElGGk~p~iV~~dADl~~Aa~~iv~~~f~n~g-~C~a~~~rv~V~~~i~dd~f~~~l~~~~~~~~~------- 572 (716)
+|+++|||||||+||++|||+|.|++.+++|+|.|+| .|+|+ +|+|||+++| |+|+++|+++++++.+
T Consensus 218 ~~~~~~lElgG~~p~iV~~dAdl~~a~~~i~~~~~~~sGQ~C~a~-~rv~V~~~i~-d~f~~~L~~~~~~~~~G~~~~~~ 295 (454)
T cd07101 218 RLIGCSLELGGKNPMIVLEDADLDKAAAGAVRACFSNAGQLCVSI-ERIYVHESVY-DEFVRRFVARTRALRLGAALDYG 295 (454)
T ss_pred cCCcEEEECCCCceEEECCCCCHHHHHHHHHHHHHhcCCCCcccC-eEEEEcHHHH-HHHHHHHHHHHhhCCCCCCCCCC
Confidence 8999999999999999999999999999999999976 99999 9999999999 7999999999887531
Q ss_pred ---------------------------EE-ecCccc---cc-cc-c-C-----CCCccccccccCceEEEEEeCCHHHHH
Q 005047 573 ---------------------------GL-FGGPRA---SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAI 613 (716)
Q Consensus 573 ---------------------------~~-~g~~~~---~~-~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi 613 (716)
++ .|+... .+ |+ | | +++++++||+||||++|++|+|+||||
T Consensus 296 ~~~gpli~~~~~~~v~~~v~~a~~~Ga~vl~gg~~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai 375 (454)
T cd07101 296 PDMGSLISQAQLDRVTAHVDDAVAKGATVLAGGRARPDLGPYFYEPTVLTGVTEDMELFAEETFGPVVSIYRVADDDEAI 375 (454)
T ss_pred CCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCeEEcCEEEeCCCCCCHHHhCCCCCceEEEEeeCCHHHHH
Confidence 12 233211 12 33 5 2 368899999999999999999999999
Q ss_pred HHHHhcCCCceeEEEccCHHHHHHHHHccCcceEEEcCCcC---CCCCCcccCcceeeccccccccccccchhcccEEEE
Q 005047 614 DHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTR---FCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRW 690 (716)
Q Consensus 614 ~~aN~~~~GL~a~i~t~d~~~a~~~~~~~~~G~v~vN~~~~---~~~~~p~g~g~~sG~~~~~~~~~g~~gl~~ft~~k~ 690 (716)
+++|+++|||++||||+|.+++.++++++++|+||||++.. ..+..||||.+.||+| +++|++|+++||+.|+
T Consensus 376 ~~~n~~~~gL~~~i~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~~~PfgG~k~SG~G----~~~g~~~~~~~~~~k~ 451 (454)
T cd07101 376 ELANDTDYGLNASVWTRDGARGRRIAARLRAGTVNVNEGYAAAWASIDAPMGGMKDSGLG----RRHGAEGLLKYTETQT 451 (454)
T ss_pred HHHhCCCCCceEEEEcCCHHHHHHHHHhcCcceEEECCCCCcCcCCCCCCCCcccccccC----ccchHHHHHHhcceEE
Confidence 99999999999999999999999999999999999998654 2356899999999986 3569999999999999
Q ss_pred EEE
Q 005047 691 ILR 693 (716)
Q Consensus 691 v~~ 693 (716)
|++
T Consensus 452 v~~ 454 (454)
T cd07101 452 VAV 454 (454)
T ss_pred EeC
Confidence 863
No 49
>cd07120 ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like. Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural.
Probab=100.00 E-value=5.4e-73 Score=633.24 Aligned_cols=395 Identities=20% Similarity=0.229 Sum_probs=338.8
Q ss_pred HHHhcCCcceeEEecCCccccchhhHHHHHHHHHHHHHH--HhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Q 005047 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRR--LQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQ 345 (716)
Q Consensus 268 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~--w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~ 345 (716)
.+|.||+.++++..++ .+|+++|+++|++||+. |+. ++.+|.++|++++++|++|+++|++++.+|.++..
T Consensus 2 ~nP~t~~~i~~~~~~~------~~~v~~av~~A~~a~~~~~w~~-~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~ 74 (455)
T cd07120 2 IDPATGEVIGTYADGG------VAEAEAAIAAARRAFDETDWAH-DPRLRARVLLELADAFEANAERLARLLALENGKIL 74 (455)
T ss_pred cCCCCCCEEEEEeCCC------HHHHHHHHHHHHHhcCCCccCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 3578999999999888 89999999999999985 998 89999999999999999999999999887765432
Q ss_pred HhchhHHHHHHhhcCHHHHHHHHHHHHHHhccccc-ccccccccccCCCeEEEEeecceeEEEEEcCC-Cch-hHHHHHH
Q 005047 346 EAGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIAS 422 (716)
Q Consensus 346 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~-~P~-~~~~~~~ 422 (716)
.++ ..|+...++.+++++...+. .|...+. ..+...+..|+|+|||++|+|| ||. +.+++++
T Consensus 75 ----~~a--------~~Ev~~~i~~l~~~~~~~~~~~g~~~~~---~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~ 139 (455)
T cd07120 75 ----GEA--------RFEISGAISELRYYAGLARTEAGRMIEP---EPGSFSLVLREPMGVAGIIVPWNSPVVLLVRSLA 139 (455)
T ss_pred ----HHH--------HHHHHHHHHHHHHHHHHHHHhcCccccc---CCCceEEEEEecceeEEEECCCchHHHHHHHHHH
Confidence 122 23667777777777654332 2332211 1234568899999999999999 685 5789999
Q ss_pred HHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CchHHHhhcCCCCccEEEeecCHHHHHHHHHh
Q 005047 423 LAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKES 500 (716)
Q Consensus 423 ~ALaaGNtvv~Kps~~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~ 500 (716)
|||++||+||+|||+.||+++.+++++++++ + +|+|++|+|+| +.++++.|..||+|++|+||||+++|+.|++.
T Consensus 140 ~AL~aGN~vvlKps~~~~~~~~~l~~~~~~a---ag~P~g~~~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~ 216 (455)
T cd07120 140 PALAAGCTVVVKPAGQTAQINAAIIRILAEI---PSLPAGVVNLFTESGSEGAAHLVASPDVDVISFTGSTATGRAIMAA 216 (455)
T ss_pred HHHHcCCEEEeECCCCChHHHHHHHHHHHHh---cCCCccceEEEecCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHH
Confidence 9999999999999999999999999999862 5 99999999996 56678888899999999999999999999988
Q ss_pred c---CCCEEEecCCcceEEEcCCCCHHHHHHHHHHhcCCCCC-ccccccceEEEeCccCChhhHHHHHHHHHhcCC----
Q 005047 501 T---KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMVETLLVHKDLACNGALNELVVELQHEGV---- 572 (716)
Q Consensus 501 a---~~~~~lElGGk~p~iV~~dADl~~Aa~~iv~~~f~n~g-~C~a~~~rv~V~~~i~dd~f~~~l~~~~~~~~~---- 572 (716)
+ .||+++|||||||+||++|||+|.|++.+++++|.|+| .|+++ +|+|||+++| |+|+++|+++++++++
T Consensus 217 aa~~~~~~~lElGG~~~~IV~~daDl~~aa~~i~~~~~~~~GQ~C~a~-~rv~V~~~i~-~~f~~~l~~~~~~l~~G~p~ 294 (455)
T cd07120 217 AAPTLKRLGLELGGKTPCIVFDDADLDAALPKLERALTIFAGQFCMAG-SRVLVQRSIA-DEVRDRLAARLAAVKVGPGL 294 (455)
T ss_pred HHhcCCeEEEECCCCCeeEECCCCCHHHHHHHHHHHHHHhCCCCCCCC-eEEEEcHHHH-HHHHHHHHHHHHhcCcCCCC
Confidence 7 38999999999999999999999999999999999987 99999 9999999999 7999999999887631
Q ss_pred ------------------------------EE-ecCcc-c----ccc-c-c-C-----CCCccccccccCceEEEEEeCC
Q 005047 573 ------------------------------GL-FGGPR-A----SKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVDD 608 (716)
Q Consensus 573 ------------------------------~~-~g~~~-~----~~~-~-p-v-----~~~~~~~eE~FGPVl~v~~~~~ 608 (716)
++ .|+.+ . .++ + | | ++|++++||+||||++|++|+|
T Consensus 295 ~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~~~~~g~~~~~~~~~g~~~~Ptvl~~~~~d~~i~~~E~FgPvl~v~~~~~ 374 (455)
T cd07120 295 DPASDMGPLIDRANVDRVDRMVERAIAAGAEVVLRGGPVTEGLAKGAFLRPTLLEVDDPDADIVQEEIFGPVLTLETFDD 374 (455)
T ss_pred CCCCCcCCccCHHHHHHHHHHHHHHHHCCCEEEeCCccCcccCCCCceECCEEEecCCCCChhhhCcCcCceEEEeecCC
Confidence 22 22322 1 122 3 5 2 3688999999999999999999
Q ss_pred HHHHHHHHHhcCCCceeEEEccCHHHHHHHHHccCcceEEEcCCcCCCCCCcccCcceeeccccccccccccchhcccEE
Q 005047 609 VRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTT 688 (716)
Q Consensus 609 ~deAi~~aN~~~~GL~a~i~t~d~~~a~~~~~~~~~G~v~vN~~~~~~~~~p~g~g~~sG~~~~~~~~~g~~gl~~ft~~ 688 (716)
+||||+++|+++|||++||||+|.++++++++++++|.|+||++....+..||||.++||+| +++|++|+++||+.
T Consensus 375 ~deai~~~n~~~~gLs~~ift~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G----~~~g~~~l~~ft~~ 450 (455)
T cd07120 375 EAEAVALANDTDYGLAASVWTRDLARAMRVARAIRAGTVWINDWNKLFAEAEEGGYRQSGLG----RLHGVAALEDFIEY 450 (455)
T ss_pred HHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCccccccC----ccchHHHHHHHhce
Confidence 99999999999999999999999999999999999999999998777778899999999986 35699999999999
Q ss_pred EEEEE
Q 005047 689 RWILR 693 (716)
Q Consensus 689 k~v~~ 693 (716)
|+|++
T Consensus 451 k~v~~ 455 (455)
T cd07120 451 KHIYL 455 (455)
T ss_pred eEEeC
Confidence 99863
No 50
>PLN02203 aldehyde dehydrogenase
Probab=100.00 E-value=1.9e-72 Score=629.03 Aligned_cols=386 Identities=20% Similarity=0.220 Sum_probs=324.3
Q ss_pred hhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhchhHHHHHHhhcCHHHHHHHHH
Q 005047 290 QVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAK 369 (716)
Q Consensus 290 ~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 369 (716)
.+||++++++|++||+.|+.++..+|.++|++++++|++|+|+|++++++|++++. .++...++..+...++++++
T Consensus 5 ~~~v~~av~~a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~----~ea~~~Ev~~~~~~~~~~~~ 80 (484)
T PLN02203 5 GETLEGSVAELRETYESGRTRSLEWRKSQLKGLLRLLKDNEEAIFKALHQDLGKHR----VEAYRDEVGVLTKSANLALS 80 (484)
T ss_pred HHHHHHHHHHHHHHHHhcCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH----HHHHHHHHHHHHHHHHHHHH
Confidence 78999999999999999999999999999999999999999999999998876543 23322334444455566666
Q ss_pred HHHHHhcccccccccccccccCCCeEEEEeecceeEEEEEcCC-Cch-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHH
Q 005047 370 SIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILH 447 (716)
Q Consensus 370 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~-~P~-~~~~~~~~ALaaGNtvv~Kps~~tp~t~~~l~ 447 (716)
.++.+.+... + ..+.. ..+...++.|+|+|||++|+|| ||+ +.++++++||++||+||+|||+.||+|+.+++
T Consensus 81 ~~~~~~~~~~--~-~~~~~--~~~~~~~~~reP~GVv~~I~pwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~ 155 (484)
T PLN02203 81 NLKKWMAPKK--A-KLPLV--AFPATAEVVPEPLGVVLIFSSWNFPIGLSLEPLIGAIAAGNAVVLKPSELAPATSAFLA 155 (484)
T ss_pred HHHHHhcccc--c-cCCcc--cCCceeEEEEecccEEEEEcCCcchHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHH
Confidence 5555543110 0 11110 1233568899999999999998 695 57899999999999999999999999999999
Q ss_pred HHHHHhcccccCcCceEEecCCchHHHhhcCCCCccEEEeecCHHHHHHHHHhc---CCCEEEecCCcceEEEcC---CC
Q 005047 448 KVITSAIPDTVGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST---KIPVLGHADGICHVYVDK---SA 521 (716)
Q Consensus 448 ~l~~~al~~alP~gvv~vv~~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a---~~~~~lElGGk~p~iV~~---dA 521 (716)
+++.+ ++|+|++|+|+|+.++++.|..|+ ||+|+||||+++|+.|++.+ .+|+++|||||||+||++ ||
T Consensus 156 ~~~~~----~lP~gvv~vv~g~~~~~~~l~~~~-vd~v~fTGS~~~G~~v~~~aa~~l~~v~lElGGknp~iV~~d~~da 230 (484)
T PLN02203 156 ANIPK----YLDSKAVKVIEGGPAVGEQLLQHK-WDKIFFTGSPRVGRIIMTAAAKHLTPVALELGGKCPCIVDSLSSSR 230 (484)
T ss_pred HHHHH----hCCcCEEEEEeCCHHHHHHHHhCC-CCEEEEECCHHHHHHHHHHHHhcCCCEEEEecCCCeEEEccCCCCC
Confidence 99985 599999999998767888888885 99999999999999999887 499999999999999997 69
Q ss_pred CHHHHHHHHHHhcCC-CCC-ccccccceEEEeCccCChhhHHHHHHHHHhcCC---------------------------
Q 005047 522 NLDVAKNIVIDAKID-YPA-ACNAMVETLLVHKDLACNGALNELVVELQHEGV--------------------------- 572 (716)
Q Consensus 522 Dl~~Aa~~iv~~~f~-n~g-~C~a~~~rv~V~~~i~dd~f~~~l~~~~~~~~~--------------------------- 572 (716)
|+|.|++.+++|+|. |+| +|+|+ +|+|||++|| |+|+++|+++++++..
T Consensus 231 Dl~~aa~~i~~~~f~~~aGQ~C~a~-~rv~V~~~i~-d~f~~~L~~~~~~~~~G~p~~~~~~Gpli~~~~~~~v~~~i~~ 308 (484)
T PLN02203 231 DTKVAVNRIVGGKWGSCAGQACIAI-DYVLVEERFA-PILIELLKSTIKKFFGENPRESKSMARILNKKHFQRLSNLLKD 308 (484)
T ss_pred CHHHHHHHHHHHhcccCCCCccccC-CeEEEcHHHH-HHHHHHHHHHHHHhcCCCCCcCCCcCCCCCHHHHHHHHHHHHH
Confidence 999999999999995 665 99999 9999999999 7999999999877521
Q ss_pred -----E-EecCccc-ccc-c-c-C-----CCCccccccccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEccCHHHHHH
Q 005047 573 -----G-LFGGPRA-SKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAET 637 (716)
Q Consensus 573 -----~-~~g~~~~-~~~-~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~i~t~d~~~a~~ 637 (716)
. +.|+... .++ + | | ++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++
T Consensus 309 a~~~~~~~~gg~~~~~g~~i~PTvl~~v~~d~~i~~eE~FGPVl~v~~~~~~~eai~~aN~~~~gL~a~vft~d~~~a~~ 388 (484)
T PLN02203 309 PRVAASIVHGGSIDEKKLFIEPTILLNPPLDSDIMTEEIFGPLLPIITVKKIEDSIAFINSKPKPLAIYAFTNNEKLKRR 388 (484)
T ss_pred HHhCCeEEeCCCcCCCCCEEeeEEEecCCCCCHHHhcCccCCeEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHH
Confidence 1 1233221 233 3 5 2 368999999999999999999999999999999999999999999999999
Q ss_pred HHHccCcceEEEcCCcCC--CCCCcccCcceeeccccccccccccchhcccEEEEEEEcC
Q 005047 638 FLCQVDSAAVFHNASTRF--CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGN 695 (716)
Q Consensus 638 ~~~~~~~G~v~vN~~~~~--~~~~p~g~g~~sG~~~~~~~~~g~~gl~~ft~~k~v~~~~ 695 (716)
+++++++|.|+||++... .+.+||||.+.||+| +++|++|+++||+.|+|+++.
T Consensus 389 ~~~~l~~G~V~IN~~~~~~~~~~~PfGG~k~SG~G----r~~g~~~l~~ft~~k~v~~~~ 444 (484)
T PLN02203 389 ILSETSSGSVTFNDAIIQYACDSLPFGGVGESGFG----RYHGKYSFDTFSHEKAVLRRS 444 (484)
T ss_pred HHHhCCcceEEECCcccccCCCCCCCCCcCcccCC----ccccHHHHHHhcceeEEEEcC
Confidence 999999999999987542 367899999999986 356999999999999998764
No 51
>cd07115 ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like. 4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD.
Probab=100.00 E-value=1.6e-72 Score=631.88 Aligned_cols=396 Identities=18% Similarity=0.200 Sum_probs=340.0
Q ss_pred HHhcCCcceeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhc
Q 005047 269 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAG 348 (716)
Q Consensus 269 ~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~g 348 (716)
+|.+|+.++++...+ .+++++++++|++||+.|+++|.++|.++|++++++|++|+++|++++.+|++++..
T Consensus 3 ~P~t~~~i~~~~~~~------~~~v~~av~~a~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~la~~~~~e~Gk~~~-- 74 (453)
T cd07115 3 NPATGELIARVAQAS------AEDVDAAVAAARAAFEAWSAMDPAERGRILWRLAELILANADELARLESLDTGKPIR-- 74 (453)
T ss_pred CCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH--
Confidence 577899999998888 889999999999999999999999999999999999999999999998877654321
Q ss_pred hhHHHHHHhhcCHHHHHHHHHHHHHHhccccc-ccccccccccCCCeEEEEeecceeEEEEEcCC-Cch-hHHHHHHHHH
Q 005047 349 YAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAI 425 (716)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~-~P~-~~~~~~~~AL 425 (716)
++. ..|+..+++.+++++.+.+. .+...+. ..+...+++++|+|||++|+|| ||. +.++++++||
T Consensus 75 --~~~-------~~ev~~~i~~l~~~~~~~~~~~g~~~~~---~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~AL 142 (453)
T cd07115 75 --AAR-------RLDVPRAADTFRYYAGWADKIEGEVIPV---RGPFLNYTVREPVGVVGAIVPWNFPLMFAAWKVAPAL 142 (453)
T ss_pred --HHH-------HHHHHHHHHHHHHHHHHHHHhcCceecC---CCCceEEEEecceeEEEEEcCCCCHHHHHHHHHHHHH
Confidence 221 12555666667766654332 2322221 1344568899999999999998 696 5679999999
Q ss_pred HhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CchHHHhhcCCCCccEEEeecCHHHHHHHHHhc--
Q 005047 426 RSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST-- 501 (716)
Q Consensus 426 aaGNtvv~Kps~~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a-- 501 (716)
++||+||+|||+.||+++..+++++.+ + ||+|++|+|++ ++++++.|..||++|+|+||||+.+|+.|++.+
T Consensus 143 aaGN~Vi~Kps~~~p~~~~~l~~~~~~----aGlP~~~~~~v~g~~~~~~~~l~~~~~id~v~fTGs~~~g~~v~~~aa~ 218 (453)
T cd07115 143 AAGNTVVLKPAELTPLSALRIAELMAE----AGFPAGVLNVVTGFGEVAGAALVEHPDVDKITFTGSTAVGRKIMQGAAG 218 (453)
T ss_pred hcCCEEEEECCCCCcHHHHHHHHHHHh----cCcCchheEEEecCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhh
Confidence 999999999999999999999999986 8 99999999996 566788888999999999999999999999876
Q ss_pred -CCCEEEecCCcceEEEcCCCCHHHHHHHHHHhcCCCCC-ccccccceEEEeCccCChhhHHHHHHHHHhcC--------
Q 005047 502 -KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMVETLLVHKDLACNGALNELVVELQHEG-------- 571 (716)
Q Consensus 502 -~~~~~lElGGk~p~iV~~dADl~~Aa~~iv~~~f~n~g-~C~a~~~rv~V~~~i~dd~f~~~l~~~~~~~~-------- 571 (716)
.||+++|||||||+||++|||+|.|++.+++++|.|+| .|+|+ +|||||+++| |+|+++|+++++++.
T Consensus 219 ~~~~~~lElgG~~p~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~-~~v~V~~~i~-~~f~~~l~~~~~~~~~g~p~~~~ 296 (453)
T cd07115 219 NLKRVSLELGGKSANIVFADADLDAAVRAAATGIFYNQGQMCTAG-SRLLVHESIY-DEFLERFTSLARSLRPGDPLDPK 296 (453)
T ss_pred cCCeEEEecCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCCCC-eEEEEcHHHH-HHHHHHHHHHHhcCCcCCCCCCC
Confidence 38999999999999999999999999999999999976 99999 9999999999 799999999887652
Q ss_pred --------------------------CEEe-cCccc--cc-cc-c-C-----CCCccccccccCceEEEEEeCCHHHHHH
Q 005047 572 --------------------------VGLF-GGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAID 614 (716)
Q Consensus 572 --------------------------~~~~-g~~~~--~~-~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi~ 614 (716)
.++. |+... .+ ++ | | +++++++||+||||++|++|+|+||||+
T Consensus 297 ~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~ 376 (453)
T cd07115 297 TQMGPLVSQAQFDRVLDYVDVGREEGARLLTGGKRPGARGFFVEPTIFAAVPPEMRIAQEEIFGPVVSVMRFRDEEEALR 376 (453)
T ss_pred CCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCceECCEEEecCCCCChHhhCCCcCceEEEEeeCCHHHHHH
Confidence 2222 44322 23 33 5 2 3688999999999999999999999999
Q ss_pred HHHhcCCCceeEEEccCHHHHHHHHHccCcceEEEcCCcCCCCCCcccCcceeeccccccccccccchhcccEEEEEEEc
Q 005047 615 HIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRG 694 (716)
Q Consensus 615 ~aN~~~~GL~a~i~t~d~~~a~~~~~~~~~G~v~vN~~~~~~~~~p~g~g~~sG~~~~~~~~~g~~gl~~ft~~k~v~~~ 694 (716)
++|+++|||++||||+|.++++++++++++|+|+||++....+.+||||.+.||+| +++|++|+++|++.|+++++
T Consensus 377 ~~n~~~~gL~~~ifs~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~G----~~~g~~~~~~f~~~k~~~~~ 452 (453)
T cd07115 377 IANGTEYGLAAGVWTRDLGRAHRVAAALKAGTVWINTYNRFDPGSPFGGYKQSGFG----REMGREALDEYTEVKSVWVN 452 (453)
T ss_pred HHhCCCCCCeEEEECCCHHHHHHHHHhcCccEEEECCCCCCCCCCCCCCcccccCC----cCchHHHHHHhhceEEEEEe
Confidence 99999999999999999999999999999999999997777778999999999986 34699999999999999763
No 52
>cd07109 ALDH_AAS00426 Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like. Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD.
Probab=100.00 E-value=1.4e-72 Score=632.50 Aligned_cols=393 Identities=19% Similarity=0.205 Sum_probs=337.6
Q ss_pred HHhcCCcceeEEecCCccccchhhHHHHHHHHHHHHHHHh-cCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHh
Q 005047 269 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQ-ALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 347 (716)
Q Consensus 269 ~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~-~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~ 347 (716)
+|++|+.++++..++ .+|+++++++|++||+.|. ++|.++|.++|++++++|++|+++|++++++|.+++..
T Consensus 3 ~P~tg~~i~~~~~~~------~~dv~~av~~a~~A~~~~~~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~- 75 (454)
T cd07109 3 DPSTGEVFARIARGG------AADVDRAVQAARRAFESGWLRLSPAERGRLLLRIARLIREHADELARLESLDTGKPLT- 75 (454)
T ss_pred CCCCCCEEEEEcCCC------HHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHH-
Confidence 578899999998888 8899999999999999877 99999999999999999999999999998877654321
Q ss_pred chhHHHHHHhhcCHHHHHHHHHHHHHHhccccc-ccccccccccCCCeEEEEeecceeEEEEEcCC-Cch-hHHHHHHHH
Q 005047 348 GYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 424 (716)
Q Consensus 348 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~-~P~-~~~~~~~~A 424 (716)
++ ..|+..+++.+++++...+. .+...+. ..+...+.+++|+|||++|+|| ||. ++++++++|
T Consensus 76 ---~a--------~~ev~~~~~~l~~~~~~~~~~~g~~~~~---~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~A 141 (454)
T cd07109 76 ---QA--------RADVEAAARYFEYYGGAADKLHGETIPL---GPGYFVYTVREPHGVTGHIIPWNYPLQITGRSVAPA 141 (454)
T ss_pred ---HH--------HHHHHHHHHHHHHHHHHHHHhcCccccc---CCCceEEEEEeeeeEEEEECCCchHHHHHHHHHHHH
Confidence 22 23566677777776654322 2322221 1344678899999999999998 695 678999999
Q ss_pred HHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CchHHHhhcCCCCccEEEeecCHHHHHHHHHhc-
Q 005047 425 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST- 501 (716)
Q Consensus 425 LaaGNtvv~Kps~~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a- 501 (716)
|++||+||+|||+.||+|+.++++++.+ + ||+|++|+|+| +.+.++.|..||+||+|+||||+++|+.|++.+
T Consensus 142 LaaGN~VvlKps~~~p~~~~~l~~~~~~----aGlP~gv~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa 217 (454)
T cd07109 142 LAAGNAVVVKPAEDAPLTALRLAELAEE----AGLPAGALNVVTGLGAEAGAALVAHPGVDHISFTGSVETGIAVMRAAA 217 (454)
T ss_pred HHcCCEEEEECCCCChHHHHHHHHHHHH----cCcCccceEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHh
Confidence 9999999999999999999999999986 7 99999999996 666777788899999999999999999999877
Q ss_pred --CCCEEEecCCcceEEEcCCCCHHHHHHHHHHhcCCCCC-ccccccceEEEeCccCChhhHHHHHHHHHhcCC------
Q 005047 502 --KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMVETLLVHKDLACNGALNELVVELQHEGV------ 572 (716)
Q Consensus 502 --~~~~~lElGGk~p~iV~~dADl~~Aa~~iv~~~f~n~g-~C~a~~~rv~V~~~i~dd~f~~~l~~~~~~~~~------ 572 (716)
.+|+++|||||||+||++|||++.|++.+++|+|.|+| .|+|+ +|||||+++| |+|+++|+++++++.+
T Consensus 218 ~~~~p~~lElgG~~~~iV~~daDl~~Aa~~i~~~~~~~~GQ~C~a~-~rv~V~~~i~-~~f~~~l~~~~~~~~~G~p~~~ 295 (454)
T cd07109 218 ENVVPVTLELGGKSPQIVFADADLEAALPVVVNAIIQNAGQTCSAG-SRLLVHRSIY-DEVLERLVERFRALRVGPGLED 295 (454)
T ss_pred hcCCcEEEECCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCccC-cEEEEcHHHH-HHHHHHHHHHHHhCCCCCCccc
Confidence 48999999999999999999999999999999999987 99999 9999999999 7999999999887532
Q ss_pred ---------------------------EEe-cCccc-----ccc-c-c-C-----CCCccccccccCceEEEEEeCCHHH
Q 005047 573 ---------------------------GLF-GGPRA-----SKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRA 611 (716)
Q Consensus 573 ---------------------------~~~-g~~~~-----~~~-~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~de 611 (716)
+++ |+... .++ + | | +++++++||+||||++|++|+|+||
T Consensus 296 ~~~gpli~~~~~~~~~~~i~~a~~~ga~~l~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~de 375 (454)
T cd07109 296 PDLGPLISAKQLDRVEGFVARARARGARIVAGGRIAEGAPAGGYFVAPTLLDDVPPDSRLAQEEIFGPVLAVMPFDDEAE 375 (454)
T ss_pred CcCCCccCHHHHHHHHHHHHHHHhCCCEEEeCCCcCcccCCCCcEECcEEEecCCCCChhhhCCCCCceEEEEecCCHHH
Confidence 222 33221 133 3 5 2 3689999999999999999999999
Q ss_pred HHHHHHhcCCCceeEEEccCHHHHHHHHHccCcceEEEcCCc-CCCCCCcccCcceeeccccccccccccchhcccEEEE
Q 005047 612 AIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNAST-RFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRW 690 (716)
Q Consensus 612 Ai~~aN~~~~GL~a~i~t~d~~~a~~~~~~~~~G~v~vN~~~-~~~~~~p~g~g~~sG~~~~~~~~~g~~gl~~ft~~k~ 690 (716)
||+++|+++|||++||||+|.+++.++++++++|+|+||++. ......||||.+.||+| +++|++|+++|++.|+
T Consensus 376 Ai~~~n~~~~gL~~~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~k~SG~G----~~~g~~~~~~f~~~k~ 451 (454)
T cd07109 376 AIALANGTDYGLVAGVWTRDGDRALRVARRLRAGQVFVNNYGAGGGIELPFGGVKKSGHG----REKGLEALYNYTQTKT 451 (454)
T ss_pred HHHHhhCCCCCceEEEECCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCCcCCcccCcCC----ccchHHHHHHHhceeE
Confidence 999999999999999999999999999999999999999876 44557899999999986 3569999999999999
Q ss_pred EE
Q 005047 691 IL 692 (716)
Q Consensus 691 v~ 692 (716)
|+
T Consensus 452 i~ 453 (454)
T cd07109 452 VA 453 (454)
T ss_pred Ee
Confidence 85
No 53
>cd07141 ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like. NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism.
Probab=100.00 E-value=1.3e-72 Score=635.83 Aligned_cols=396 Identities=17% Similarity=0.193 Sum_probs=338.2
Q ss_pred HHHhcCCcceeEEecCCccccchhhHHHHHHHHHHHHH---HHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Q 005047 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSR---RLQALQSQDRRKILLDVADALEANESLIKVENEADVAAA 344 (716)
Q Consensus 268 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~---~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~ 344 (716)
.+|.+|+.++++...+ .+++++++++|++||+ .|+++|.++|.++|++++++|+++.++|++++.+|.+++
T Consensus 27 ~~P~tg~~i~~~~~~~------~~~v~~av~~A~~A~~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~ 100 (481)
T cd07141 27 INPATGEKICEVQEGD------KADVDKAVKAARAAFKLGSPWRTMDASERGRLLNKLADLIERDRAYLASLETLDNGKP 100 (481)
T ss_pred ECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHhhccCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCc
Confidence 5678899999998888 8999999999999998 699999999999999999999999999999887665443
Q ss_pred HHhchhHHHHHHhhcCHHHHHHHHHHHHHHhccccc-ccccccccccCCCeEEEEeecceeEEEEEcCC-Cch-hHHHHH
Q 005047 345 QEAGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIA 421 (716)
Q Consensus 345 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~-~P~-~~~~~~ 421 (716)
.. ++. ..++..+++.+++++.+.+. .+...+. ..+...+.+++|+|||++|+|| ||. +.++++
T Consensus 101 ~~----~~~-------~~ev~~~~~~l~~~a~~~~~~~g~~~~~---~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~ 166 (481)
T cd07141 101 FS----KSY-------LVDLPGAIKVLRYYAGWADKIHGKTIPM---DGDFFTYTRHEPVGVCGQIIPWNFPLLMAAWKL 166 (481)
T ss_pred hH----HHH-------HHHHHHHHHHHHHHHHHHHHhcCceecC---CCCceEEEEEeceeEEEEEccChhHHHHHHHHH
Confidence 21 111 12566667777776654332 2322221 1233567889999999999998 696 468999
Q ss_pred HHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CchHHHhhcCCCCccEEEeecCHHHHHHHHH
Q 005047 422 SLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKE 499 (716)
Q Consensus 422 ~~ALaaGNtvv~Kps~~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~ 499 (716)
++||++||+||+|||+.||+|+..+++++.+ + +|+|++|+|+| +.++++.|..||+||+|+||||+.+|+.|++
T Consensus 167 ~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~----aGlP~gvv~~v~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~~ 242 (481)
T cd07141 167 APALACGNTVVLKPAEQTPLTALYLASLIKE----AGFPPGVVNVVPGYGPTAGAAISSHPDIDKVAFTGSTEVGKLIQQ 242 (481)
T ss_pred HHHHHcCCEEEEeCCCCCcHHHHHHHHHHHH----cCcCccceEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHH
Confidence 9999999999999999999999999999986 7 99999999996 5567888999999999999999999999988
Q ss_pred hcC----CCEEEecCCcceEEEcCCCCHHHHHHHHHHhcCCCCC-ccccccceEEEeCccCChhhHHHHHHHHHhcCC--
Q 005047 500 STK----IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMVETLLVHKDLACNGALNELVVELQHEGV-- 572 (716)
Q Consensus 500 ~a~----~~~~lElGGk~p~iV~~dADl~~Aa~~iv~~~f~n~g-~C~a~~~rv~V~~~i~dd~f~~~l~~~~~~~~~-- 572 (716)
.+. ||+++|||||||+||++|||++.|++.+++|+|.|+| .|+|+ +|||||+++| |+|+++|+++++++.+
T Consensus 243 ~aa~~~~~~~~lElGG~~~~iV~~dADl~~A~~~i~~~~~~~~GQ~C~a~-~rv~V~~~i~-d~f~~~l~~~~~~~~~G~ 320 (481)
T cd07141 243 AAGKSNLKRVTLELGGKSPNIVFADADLDYAVEQAHEALFFNMGQCCCAG-SRTFVQESIY-DEFVKRSVERAKKRVVGN 320 (481)
T ss_pred HhhhhcCceEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCcccCC-eEEEEcHHHH-HHHHHHHHHHHHhCCCCC
Confidence 653 7999999999999999999999999999999999987 99999 9999999999 7999999998876531
Q ss_pred --------------------------------EE-ecCccc--cc-cc-c-C-----CCCccccccccCceEEEEEeCCH
Q 005047 573 --------------------------------GL-FGGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDV 609 (716)
Q Consensus 573 --------------------------------~~-~g~~~~--~~-~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~ 609 (716)
++ .|+... .+ |+ | | +++++++||+||||++|++|+|+
T Consensus 321 p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~ 400 (481)
T cd07141 321 PFDPKTEQGPQIDEEQFKKILELIESGKKEGAKLECGGKRHGDKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIFKFKTI 400 (481)
T ss_pred CCCCCCCCcCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEeeEEEecCCCCChhhhccccCCeEEEEeeCCH
Confidence 12 233321 23 33 5 2 36899999999999999999999
Q ss_pred HHHHHHHHhcCCCceeEEEccCHHHHHHHHHccCcceEEEcCCcCCCCCCcccCcceeeccccccccccccchhcccEEE
Q 005047 610 RAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTR 689 (716)
Q Consensus 610 deAi~~aN~~~~GL~a~i~t~d~~~a~~~~~~~~~G~v~vN~~~~~~~~~p~g~g~~sG~~~~~~~~~g~~gl~~ft~~k 689 (716)
||||+++|+++|||++||||+|.+++.+|++++++|+|+||++....+..||||.+.||+| +++|++|+++||+.|
T Consensus 401 ~eai~~~n~~~~gLs~~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G----~~~g~~~~~~ft~~k 476 (481)
T cd07141 401 DEVIERANNTTYGLAAAVFTKDIDKAITFSNALRAGTVWVNCYNVVSPQAPFGGYKMSGNG----RELGEYGLQEYTEVK 476 (481)
T ss_pred HHHHHHHhCCCccceEEEECCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCCCCcccCcCC----ccchHHHHHHHhheE
Confidence 9999999999999999999999999999999999999999987766778899999999986 356999999999999
Q ss_pred EEEE
Q 005047 690 WILR 693 (716)
Q Consensus 690 ~v~~ 693 (716)
+|++
T Consensus 477 ~v~~ 480 (481)
T cd07141 477 TVTI 480 (481)
T ss_pred EEEE
Confidence 9875
No 54
>cd07094 ALDH_F21_LactADH-like ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins. ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences.
Probab=100.00 E-value=2.5e-72 Score=630.61 Aligned_cols=398 Identities=21% Similarity=0.275 Sum_probs=336.8
Q ss_pred HHHhcCCcceeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHh
Q 005047 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 347 (716)
Q Consensus 268 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~ 347 (716)
.+|++|+.++++..++ .+|+++++++|++||+.|+++|..+|.++|++++++|+++.++|++++.+|.+++..
T Consensus 4 ~~P~t~~~~~~~~~~~------~~~v~~av~~a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~- 76 (453)
T cd07094 4 HNPYDGEVIGKVPADD------RADAEEALATARAGAENRRALPPHERMAILERAADLLKKRAEEFAKIIACEGGKPIK- 76 (453)
T ss_pred cCCCCCCEEEEEcCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH-
Confidence 4678999999998888 889999999999999999999999999999999999999999999998877654432
Q ss_pred chhHHHHHHhhcCHHHHHHHHHHHHHHhccccc-cccccccc--ccCCCeEEEEeecceeEEEEEcCC-Cch-hHHHHHH
Q 005047 348 GYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRT--ELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIAS 422 (716)
Q Consensus 348 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~--~~~~~~~~~~~~~PlGVv~~I~p~-~P~-~~~~~~~ 422 (716)
++ ..++..+++.+++++...+. .++..+.. ....+...+++++|+|||++|+|| ||. +.+++++
T Consensus 77 ---~a--------~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~ 145 (453)
T cd07094 77 ---DA--------RVEVDRAIDTLRLAAEEAERIRGEEIPLDATQGSDNRLAWTIREPVGVVLAITPFNFPLNLVAHKLA 145 (453)
T ss_pred ---HH--------HHHHHHHHHHHHHHHHHHHHhcCccccccccccCCCceEEEEEeccceEEEECCCccHHHHHHHHHH
Confidence 22 12455555555554432211 12211110 011244567889999999999998 685 5789999
Q ss_pred HHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CchHHHhhcCCCCccEEEeecCHHHHHHHHHh
Q 005047 423 LAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKES 500 (716)
Q Consensus 423 ~ALaaGNtvv~Kps~~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~ 500 (716)
+||++||+||+|||+.+|+++.++++++.+ + +|+|++|+|+| ++++++.|..||++|+|+||||+++|+.|++.
T Consensus 146 ~AL~aGN~VI~Kps~~~p~~~~~l~~~l~~----ag~P~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~v~~~ 221 (453)
T cd07094 146 PAIATGCPVVLKPASKTPLSALELAKILVE----AGVPEGVLQVVTGEREVLGDAFAADERVAMLSFTGSAAVGEALRAN 221 (453)
T ss_pred HHHHcCCEEEEECCCcchHHHHHHHHHHHH----cCCCcCcEEEEeCCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHH
Confidence 999999999999999999999999999986 7 99999999996 56678888899999999999999999999988
Q ss_pred cC-CCEEEecCCcceEEEcCCCCHHHHHHHHHHhcCCCCC-ccccccceEEEeCccCChhhHHHHHHHHHhcCC------
Q 005047 501 TK-IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMVETLLVHKDLACNGALNELVVELQHEGV------ 572 (716)
Q Consensus 501 a~-~~~~lElGGk~p~iV~~dADl~~Aa~~iv~~~f~n~g-~C~a~~~rv~V~~~i~dd~f~~~l~~~~~~~~~------ 572 (716)
+. +|+++|||||||+||++|||++.|++.+++++|.|+| .|+|+ +|||||+++| |+|+++|+++++++.+
T Consensus 222 a~~~~~~lelGGk~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~-~~i~V~~~i~-d~f~~~L~~~~~~~~~g~p~~~ 299 (453)
T cd07094 222 AGGKRIALELGGNAPVIVDRDADLDAAIEALAKGGFYHAGQVCISV-QRIYVHEELY-DEFIEAFVAAVKKLKVGDPLDE 299 (453)
T ss_pred cCCCceEEecCCCCceEECCCCCHHHHHHHHHHHHHHhcCCCCcCC-eEEEEeHHHH-HHHHHHHHHHHHhccCCCCCCC
Confidence 84 8999999999999999999999999999999999987 99999 9999999999 7999999999886532
Q ss_pred ----------------------------EEe-cCccccccc-c-C-----CCCccccccccCceEEEEEeCCHHHHHHHH
Q 005047 573 ----------------------------GLF-GGPRASKLL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHI 616 (716)
Q Consensus 573 ----------------------------~~~-g~~~~~~~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~a 616 (716)
+++ |+.....++ | | ++|++++||+||||++|++|+|+||||+++
T Consensus 300 ~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~g~~~~Ptvl~~~~~~~~i~~~E~FgPvl~v~~~~~~~eai~~~ 379 (453)
T cd07094 300 DTDVGPLISEEAAERVERWVEEAVEAGARLLCGGERDGALFKPTVLEDVPRDTKLSTEETFGPVVPIIRYDDFEEAIRIA 379 (453)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCccCCCeEEeCEEEeCCCCCChhhhCCCcCceEEEEEeCCHHHHHHHH
Confidence 121 222222233 5 2 468999999999999999999999999999
Q ss_pred HhcCCCceeEEEccCHHHHHHHHHccCcceEEEcCCcCC-CCCCcccCcceeeccccccccccccchhcccEEEEEEE
Q 005047 617 HQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRF-CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILR 693 (716)
Q Consensus 617 N~~~~GL~a~i~t~d~~~a~~~~~~~~~G~v~vN~~~~~-~~~~p~g~g~~sG~~~~~~~~~g~~gl~~ft~~k~v~~ 693 (716)
|+++|||++||||+|.++++++++++++|+|+||++... .+..||||.++||+| +++|++|+++|++.|+|++
T Consensus 380 n~~~~gL~~~i~t~d~~~a~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~~~SG~G----~~~g~~~~~~~~~~k~i~~ 453 (453)
T cd07094 380 NSTDYGLQAGIFTRDLNVAFKAAEKLEVGGVMVNDSSAFRTDWMPFGGVKESGVG----REGVPYAMEEMTEEKTVVI 453 (453)
T ss_pred hCCCCCCeeEEECCCHHHHHHHHHhcCcCeEEEcCCCCCCCCCCCCCCccccccC----cCChHHHHHHHhceeEEeC
Confidence 999999999999999999999999999999999997654 467899999999986 3579999999999999863
No 55
>cd07150 ALDH_VaniDH_like Pseudomonas putida vanillin dehydrogenase-like. Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde.
Probab=100.00 E-value=1.8e-72 Score=631.60 Aligned_cols=396 Identities=19% Similarity=0.215 Sum_probs=336.6
Q ss_pred HHHhcCCcceeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHh
Q 005047 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 347 (716)
Q Consensus 268 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~ 347 (716)
.+|.+|+.++++...+ .+++++++++|++||+.|++++.++|.++|++++++|++++++|++++.+|++++..
T Consensus 4 ~~P~tg~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~- 76 (451)
T cd07150 4 LNPADGSVYARVAVGS------RQDAERAIAAAYDAFPAWAATTPSERERILLKAAEIMERRADDLIDLLIDEGGSTYG- 76 (451)
T ss_pred cCCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHH-
Confidence 4678999999998888 889999999999999999999999999999999999999999999998877654421
Q ss_pred chhHHHHHHhhcCHHHHHHHHHHHHHHhccccc-ccccccccccCCCeEEEEeecceeEEEEEcCC-Cch-hHHHHHHHH
Q 005047 348 GYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 424 (716)
Q Consensus 348 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~-~P~-~~~~~~~~A 424 (716)
++. .|+...++.+++++.+.+. .+...+.. ..+...+.+++|+|||++|+|| ||. +.++++++|
T Consensus 77 ---~a~--------~ev~~~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~A 143 (451)
T cd07150 77 ---KAW--------FETTFTPELLRAAAGECRRVRGETLPSD--SPGTVSMSVRRPLGVVAGITPFNYPLILATKKVAFA 143 (451)
T ss_pred ---HHH--------HHHHHHHHHHHHHHHHHHHhcCccccCC--CCCceeEEEEecccEEEEECCCccHHHHHHHHHHHH
Confidence 221 2455556666665543322 22222211 1244567889999999999998 696 578999999
Q ss_pred HHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CchHHHhhcCCCCccEEEeecCHHHHHHHHHhcC
Q 005047 425 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK 502 (716)
Q Consensus 425 LaaGNtvv~Kps~~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a~ 502 (716)
|++||+||+|||+.+|.|+.++++++.+ + +|+|++|+|+| +.++++.|..||+||+|+||||+.+|+.|++.+.
T Consensus 144 LaaGN~VilKps~~~p~t~~~l~~~~~~----ag~P~g~v~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa 219 (451)
T cd07150 144 LAAGNTVVLKPSEETPVIGLKIAEIMEE----AGLPKGVFNVVTGGGAEVGDELVDDPRVRMVTFTGSTAVGREIAEKAG 219 (451)
T ss_pred HhcCCeEEEECCccCcHHHHHHHHHHHH----hCCCcCcEEEeeCCCcHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHh
Confidence 9999999999999999999999999986 7 99999999996 5678888989999999999999999999988763
Q ss_pred ---CCEEEecCCcceEEEcCCCCHHHHHHHHHHhcCCCCC-ccccccceEEEeCccCChhhHHHHHHHHHhcCC------
Q 005047 503 ---IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMVETLLVHKDLACNGALNELVVELQHEGV------ 572 (716)
Q Consensus 503 ---~~~~lElGGk~p~iV~~dADl~~Aa~~iv~~~f~n~g-~C~a~~~rv~V~~~i~dd~f~~~l~~~~~~~~~------ 572 (716)
+|+++|||||||+||++|||+|.|++.+++|+|.|+| .|+++ +|+|||+++| |+|+++|+++++++.+
T Consensus 220 ~~~~~~~lelGG~~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~-~rv~V~~~i~-~~f~~~l~~~~~~~~~g~p~~~ 297 (451)
T cd07150 220 RHLKKITLELGGKNPLIVLADADLDYAVRAAAFGAFMHQGQICMSA-SRIIVEEPVY-DEFVKKFVARASKLKVGDPRDP 297 (451)
T ss_pred hcCCceEeecCCCCeeEECCCCChHHHHHHHHHHHHhhcCCCCCCC-eeEEEcHHHH-HHHHHHHHHHHHhcCCCCCCCC
Confidence 8999999999999999999999999999999999877 99999 9999999999 7999999999987632
Q ss_pred ----------------------------EE-ecCccccccc-c-C-----CCCccccccccCceEEEEEeCCHHHHHHHH
Q 005047 573 ----------------------------GL-FGGPRASKLL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHI 616 (716)
Q Consensus 573 ----------------------------~~-~g~~~~~~~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~a 616 (716)
++ .|+.....++ | | +++++++||+||||++|++|+|+||||+++
T Consensus 298 ~~~~gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~ 377 (451)
T cd07150 298 DTVIGPLISPRQVERIKRQVEDAVAKGAKLLTGGKYDGNFYQPTVLTDVTPDMRIFREETFGPVTSVIPAKDAEEALELA 377 (451)
T ss_pred CCCCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccCCcEEcCEEEeCCCCCCHHHhCCCcCceEEEEEeCCHHHHHHHH
Confidence 11 1221111123 5 2 357899999999999999999999999999
Q ss_pred HhcCCCceeEEEccCHHHHHHHHHccCcceEEEcCCcCCC-CCCcccCcceeeccccccccccccchhcccEEEEEEE
Q 005047 617 HQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFC-DGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILR 693 (716)
Q Consensus 617 N~~~~GL~a~i~t~d~~~a~~~~~~~~~G~v~vN~~~~~~-~~~p~g~g~~sG~~~~~~~~~g~~gl~~ft~~k~v~~ 693 (716)
|+++|||++||||+|.++++++++++++|.|+||+++... +..||||.+.||+| +++|++|+++||+.|+|++
T Consensus 378 n~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~pfgG~~~SG~G----~~~g~~~l~~~~~~k~v~~ 451 (451)
T cd07150 378 NDTEYGLSAAILTNDLQRAFKLAERLESGMVHINDPTILDEAHVPFGGVKASGFG----REGGEWSMEEFTELKWITV 451 (451)
T ss_pred hCCCCCCeEEEEeCCHHHHHHHHHhcCcCEEEECCCCCCCCCCCCcCCccccccC----cCCcHHHHHHhheeeEEeC
Confidence 9999999999999999999999999999999999986543 56899999999886 3569999999999999863
No 56
>cd07124 ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA. Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis.
Probab=100.00 E-value=3.7e-72 Score=635.84 Aligned_cols=427 Identities=18% Similarity=0.201 Sum_probs=350.5
Q ss_pred CcHHHHHHHHHHHHcCCc---EEEeeCC-----CcchHHHHhc-CCcceeEEecCCccccchhhHHHHHHHHHHHHHHHh
Q 005047 238 GMTAKVNAAYCAACAGIP---VVITSGF-----AMDSIIKVLE-GKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQ 308 (716)
Q Consensus 238 gM~~Kl~aa~~a~~~gi~---v~I~~g~-----~~~~l~~~~t-g~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~ 308 (716)
-|..+++.++...++..+ =.+++|. ..-.+.+|.+ |+.++++..++ .+++++++++|++||+.|+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~v~~P~t~~~~i~~~~~a~------~~~v~~av~~A~~A~~~W~ 86 (512)
T cd07124 13 ENRAAFRAALARVREELGREYPLVIGGKEVRTEEKIESRNPADPSEVLGTVQKAT------KEEAEAAVQAARAAFPTWR 86 (512)
T ss_pred HHHHHHHHHHHHHHhhcccccceeECCEEecCCCeEEeECCCCCCceEEEEeCCC------HHHHHHHHHHHHHHHHHHh
Confidence 445566666655554422 1233442 1123478887 99999999988 8899999999999999999
Q ss_pred cCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhchhHHHHHHhhcCHHHHHHHHHHHHHHhccccc-ccccccc
Q 005047 309 ALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKR 387 (716)
Q Consensus 309 ~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~ 387 (716)
++|.++|.++|++++++|++++++|++++++|.+++.. ++. .|+...++.+++++...+. .+...+.
T Consensus 87 ~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~----ea~--------~ev~~~i~~~~~~~~~~~~~~~~~~~~ 154 (512)
T cd07124 87 RTPPEERARLLLRAAALLRRRRFELAAWMVLEVGKNWA----EAD--------ADVAEAIDFLEYYAREMLRLRGFPVEM 154 (512)
T ss_pred cCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHcCcCHH----HHH--------HHHHHHHHHHHHHHHHHHHhcCccccC
Confidence 99999999999999999999999999998877655431 222 2455555555555543321 1222211
Q ss_pred cccCCCeEEEEeecceeEEEEEcCC-Cch-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceE
Q 005047 388 TELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIG 464 (716)
Q Consensus 388 ~~~~~~~~~~~~~~PlGVv~~I~p~-~P~-~~~~~~~~ALaaGNtvv~Kps~~tp~t~~~l~~l~~~al~~a-lP~gvv~ 464 (716)
..+...+++++|+|||++|+|| ||. +.+++++|||++||+||+|||+.||+++..+++++.+ + +|+|++|
T Consensus 155 ---~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~----aGlP~gvv~ 227 (512)
T cd07124 155 ---VPGEDNRYVYRPLGVGAVISPWNFPLAILAGMTTAALVTGNTVVLKPAEDTPVIAAKLVEILEE----AGLPPGVVN 227 (512)
T ss_pred ---CCCceeEEEEecceEEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCccccHHHHHHHHHHHH----hCcCCCceE
Confidence 1234567889999999999998 696 5689999999999999999999999999999999986 7 9999999
Q ss_pred EecC-CchHHHhhcCCCCccEEEeecCHHHHHHHHHhc---------CCCEEEecCCcceEEEcCCCCHHHHHHHHHHhc
Q 005047 465 LVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST---------KIPVLGHADGICHVYVDKSANLDVAKNIVIDAK 534 (716)
Q Consensus 465 vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a---------~~~~~lElGGk~p~iV~~dADl~~Aa~~iv~~~ 534 (716)
+|+| +.+++..|..||++|+|+||||+.+|+.|++.+ .+|+++|||||||+||++|||+|.|++.+++++
T Consensus 228 vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~~~~l~~~~lElgGk~p~iV~~daDl~~Aa~~i~~~~ 307 (512)
T cd07124 228 FLPGPGEEVGDYLVEHPDVRFIAFTGSREVGLRIYERAAKVQPGQKWLKRVIAEMGGKNAIIVDEDADLDEAAEGIVRSA 307 (512)
T ss_pred EeccCchHHHHHHhcCCCCCEEEEeCchHHHHHHHHHHhcccccccCCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHH
Confidence 9996 567888899999999999999999999998765 369999999999999999999999999999999
Q ss_pred CCCCC-ccccccceEEEeCccCChhhHHHHHHHHHhcCC---------------------------------EE-ecCcc
Q 005047 535 IDYPA-ACNAMVETLLVHKDLACNGALNELVVELQHEGV---------------------------------GL-FGGPR 579 (716)
Q Consensus 535 f~n~g-~C~a~~~rv~V~~~i~dd~f~~~l~~~~~~~~~---------------------------------~~-~g~~~ 579 (716)
|.|+| .|+|+ +|||||+++| |+|+++|+++++++.+ ++ .|+..
T Consensus 308 f~~~GQ~C~a~-~rv~V~~~i~-~~f~~~l~~~~~~~~~g~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~g~~vl~gG~~ 385 (512)
T cd07124 308 FGFQGQKCSAC-SRVIVHESVY-DEFLERLVERTKALKVGDPEDPEVYMGPVIDKGARDRIRRYIEIGKSEGRLLLGGEV 385 (512)
T ss_pred HhhCCCccccc-eEEEEcHHHH-HHHHHHHHHHHHhCCCCCCCCCCCcccCCcCHHHHHHHHHHHHHHHhCCEEEecCcc
Confidence 99987 99999 9999999999 7999999999987531 11 23322
Q ss_pred c----cccc--c-C-----CCCccccccccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEccCHHHHHHHHHccCcceE
Q 005047 580 A----SKLL--Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAV 647 (716)
Q Consensus 580 ~----~~~~--p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~i~t~d~~~a~~~~~~~~~G~v 647 (716)
. .++| | | +++++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.++++++++|+|
T Consensus 386 ~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v 465 (512)
T cd07124 386 LELAAEGYFVQPTIFADVPPDHRLAQEEIFGPVLAVIKAKDFDEALEIANDTEYGLTGGVFSRSPEHLERARREFEVGNL 465 (512)
T ss_pred CCCCCCCceEcCEEEecCCCCChHHhCCCcCCeEEEEecCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCcceE
Confidence 1 2333 6 2 3689999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCCcCC--CCCCcccCcceeeccccccccccccchhcccEEEEEEEc
Q 005047 648 FHNASTRF--CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRG 694 (716)
Q Consensus 648 ~vN~~~~~--~~~~p~g~g~~sG~~~~~~~~~g~~gl~~ft~~k~v~~~ 694 (716)
+||++... .+..||||.++||+|. +++|++|+++||+.|+|+++
T Consensus 466 ~vN~~~~~~~~~~~PfGG~k~SG~G~---~~~g~~~~~~~t~~k~v~~~ 511 (512)
T cd07124 466 YANRKITGALVGRQPFGGFKMSGTGS---KAGGPDYLLQFMQPKTVTEN 511 (512)
T ss_pred EECCCCCCCCCCCCCCCccccccCCC---ccCcHHHHHHhccEEEEEEe
Confidence 99987543 2458999999999861 24589999999999999875
No 57
>cd07089 ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins. The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD.
Probab=100.00 E-value=1.9e-72 Score=630.96 Aligned_cols=399 Identities=20% Similarity=0.213 Sum_probs=336.4
Q ss_pred HHHhcCCcceeEEecCCccccchhhHHHHHHHHHHHHHHHh-cCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Q 005047 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQ-ALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 346 (716)
Q Consensus 268 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~-~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~ 346 (716)
.+|.+|+.++.+..++ .+|+++++++|++||+.|+ ++|..+|.++|++++++|+++.++|++++.+|.+++..
T Consensus 2 ~~P~tg~~i~~~~~~~------~~~v~~av~~A~~a~~~w~w~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ 75 (459)
T cd07089 2 INPATEEVIGTAPDAG------AADVDAAIAAARRAFDTGDWSTDAEERARCLRQLHEALEARKEELRALLVAEVGAPVM 75 (459)
T ss_pred cCCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHhhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHH
Confidence 3578899999998888 8999999999999999999 99999999999999999999999999998877654431
Q ss_pred hchhHHHHHHhhcCHHHHHHHHHHHHHHhccccc-cccc-ccccc-cCCCeEEEEeecceeEEEEEcCC-Cch-hHHHHH
Q 005047 347 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQI-LKRTE-LADGLILEKTSCPLGVLLIVFES-RPD-ALVQIA 421 (716)
Q Consensus 347 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~-~~~~~-~~~~~~~~~~~~PlGVv~~I~p~-~P~-~~~~~~ 421 (716)
++.. .|+...++.+++++...+. .+.. .+... ...+...+++++|+|||++|+|| ||. ++++++
T Consensus 76 ----~~~~-------~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P~N~P~~~~~~~~ 144 (459)
T cd07089 76 ----TARA-------MQVDGPIGHLRYFADLADSFPWEFDLPVPALRGGPGRRVVRREPVGVVAAITPWNFPFFLNLAKL 144 (459)
T ss_pred ----HHHH-------HHHHHHHHHHHHHHHHHHHhcCceecCcccccCCCceeEEEEeeccEEEEEcCCchHHHHHHHHH
Confidence 1111 2444555555554433221 1111 11100 01234567899999999999998 695 578999
Q ss_pred HHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CchHHHhhcCCCCccEEEeecCHHHHHHHHH
Q 005047 422 SLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKE 499 (716)
Q Consensus 422 ~~ALaaGNtvv~Kps~~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~ 499 (716)
++||++||+||+|||+.+|.++.++++++.+ + +|+|++|+|+| +++++..|..||++++|+||||+.+|+.|++
T Consensus 145 ~~AL~aGN~vvlKps~~~p~~~~~l~~~~~~----aglP~g~~~~v~g~~~~~~~~l~~~~~~~~v~ftGs~~~g~~v~~ 220 (459)
T cd07089 145 APALAAGNTVVLKPAPDTPLSALLLGEIIAE----TDLPAGVVNVVTGSDNAVGEALTTDPRVDMVSFTGSTAVGRRIMA 220 (459)
T ss_pred HHHHHcCCEEEEECCCCChHHHHHHHHHHHH----cCCCccceEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHH
Confidence 9999999999999999999999999999986 7 99999999996 5567888889999999999999999999998
Q ss_pred hc---CCCEEEecCCcceEEEcCCCCHHHHHHHHHHhcCCCCC-ccccccceEEEeCccCChhhHHHHHHHHHhcCC---
Q 005047 500 ST---KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMVETLLVHKDLACNGALNELVVELQHEGV--- 572 (716)
Q Consensus 500 ~a---~~~~~lElGGk~p~iV~~dADl~~Aa~~iv~~~f~n~g-~C~a~~~rv~V~~~i~dd~f~~~l~~~~~~~~~--- 572 (716)
.+ .||+++|||||||+||++|||+|.|++.+++++|.|+| .|+++ +|+|||+++| |+|+++|+++++++++
T Consensus 221 ~aa~~~~~~~lelgG~n~~iV~~dadl~~aa~~i~~~~~~~sGQ~C~a~-~~v~V~~~v~-~~f~~~l~~~~~~~~~g~p 298 (459)
T cd07089 221 QAAATLKRVLLELGGKSANIVLDDADLAAAAPAAVGVCMHNAGQGCALT-TRLLVPRSRY-DEVVEALAAAFEALPVGDP 298 (459)
T ss_pred HHHhcCCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHHHhcCCcccCC-eEEEEcHHHH-HHHHHHHHHHHHhCCCCCC
Confidence 87 38999999999999999999999999999999999976 99999 9999999999 7999999999887631
Q ss_pred -------------------------------EE-ecCccc----cc-cc-c-C-----CCCccccccccCceEEEEEeCC
Q 005047 573 -------------------------------GL-FGGPRA----SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDD 608 (716)
Q Consensus 573 -------------------------------~~-~g~~~~----~~-~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~ 608 (716)
++ .|+... .+ ++ | | +++++++||+||||++|++|+|
T Consensus 299 ~~~~~~~gp~i~~~~~~~v~~~i~~a~~~Ga~~l~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~ 378 (459)
T cd07089 299 ADPGTVMGPLISAAQRDRVEGYIARGRDEGARLVTGGGRPAGLDKGFYVEPTLFADVDNDMRIAQEEIFGPVLVVIPYDD 378 (459)
T ss_pred CCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCeEECCEEEEcCCCCCHHHhCCCcCceEEEeccCC
Confidence 12 233221 23 33 5 2 4688999999999999999999
Q ss_pred HHHHHHHHHhcCCCceeEEEccCHHHHHHHHHccCcceEEEcCCcCCCCCCcccCcceeeccccccccccccchhcccEE
Q 005047 609 VRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTT 688 (716)
Q Consensus 609 ~deAi~~aN~~~~GL~a~i~t~d~~~a~~~~~~~~~G~v~vN~~~~~~~~~p~g~g~~sG~~~~~~~~~g~~gl~~ft~~ 688 (716)
+||||+++|+++|||++||||+|.++++++++++++|.|+||++....+..||||.+.||+| .++|++|+++||+.
T Consensus 379 ~deai~~~n~~~~gL~~~v~t~d~~~~~~~~~~~~~G~v~iN~~~~~~~~~PfgG~k~SG~G----~~~g~~~l~~ft~~ 454 (459)
T cd07089 379 DDEAVRIANDSDYGLSGGVWSADVDRAYRVARRIRTGSVGINGGGGYGPDAPFGGYKQSGLG----RENGIEGLEEFLET 454 (459)
T ss_pred HHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCcCCcccccCC----CCchHHHHHHhhce
Confidence 99999999999999999999999999999999999999999998766677899999999986 35699999999999
Q ss_pred EEEEE
Q 005047 689 RWILR 693 (716)
Q Consensus 689 k~v~~ 693 (716)
|+|++
T Consensus 455 k~v~~ 459 (459)
T cd07089 455 KSIAY 459 (459)
T ss_pred eEEeC
Confidence 99864
No 58
>TIGR01804 BADH glycine betaine aldehyde dehydrogenase. Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171).
Probab=100.00 E-value=1.3e-72 Score=634.48 Aligned_cols=392 Identities=15% Similarity=0.188 Sum_probs=336.7
Q ss_pred HHHhcCCcceeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHh
Q 005047 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 347 (716)
Q Consensus 268 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~ 347 (716)
.+|.+|+.++.+..++ .+++++++++|++||+.|+++|.++|.++|++++++|++++++|++++.+|.+++.
T Consensus 18 ~nP~t~~~i~~~~~~~------~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~-- 89 (467)
T TIGR01804 18 INPANQEVIATVAEAT------REDVERAIAAARRAQGEWASMTPEERGRILRRIAELIRERNEELAKLETLDTGKTL-- 89 (467)
T ss_pred ECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH--
Confidence 5678899999998888 89999999999999999999999999999999999999999999999887765442
Q ss_pred chhHHHHHHhhcCHHHHHHHHHHHHHHhcccccc-cccccccccCCCeEEEEeecceeEEEEEcCC-Cch-hHHHHHHHH
Q 005047 348 GYAKSLVSRLALKPGKISSLAKSIRILADMEEPI-GQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 424 (716)
Q Consensus 348 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~-~P~-~~~~~~~~A 424 (716)
.++. ..++..+++.+++++...+.. +...+. ......+.+|+|+|||++|+|| ||. +.++++++|
T Consensus 90 --~~a~-------~~ev~~~~~~l~~~a~~~~~~~~~~~~~---~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~A 157 (467)
T TIGR01804 90 --EETS-------VADMDDIADVFEFFAGLADKDGGEIIPL---PIPSFSYTIREPLGVCVGIGAWNYPLQIASWKIAPA 157 (467)
T ss_pred --HHHh-------HHHHHHHHHHHHHHHHHHHHhCCccccC---CCCceEEEEEeeeeEEEEECCCchHHHHHHHHHHHH
Confidence 1221 236667777777776544322 222221 1113467889999999999998 695 578999999
Q ss_pred HHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CchHHHhhcCCCCccEEEeecCHHHHHHHHHhcC
Q 005047 425 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK 502 (716)
Q Consensus 425 LaaGNtvv~Kps~~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a~ 502 (716)
|++||+||+|||+.||.|+..+++++.+ + +|+|++|+|+| +.++++.|..||+||+|+||||+++|+.|++++.
T Consensus 158 LaaGN~VvlKps~~tp~~~~~l~~~~~~----aglP~gv~~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~a~ 233 (467)
T TIGR01804 158 LAAGNAMVFKPSEITPLTALKVAELMEE----AGLPDGVFNVVLGKGAEVGEPLVNHKDVAKVSFTGGVPTGKKIMAAAA 233 (467)
T ss_pred HhcCCEEEeeCCccCcHHHHHHHHHHHH----cCcCcCcEEEEeCCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHH
Confidence 9999999999999999999999999986 7 99999999996 4678888999999999999999999999998873
Q ss_pred ---CCEEEecCCcceEEEcCCCCHHHHHHHHHHhcCCCCC-ccccccceEEEeCccCChhhHHHHHHHHHhcCC------
Q 005047 503 ---IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMVETLLVHKDLACNGALNELVVELQHEGV------ 572 (716)
Q Consensus 503 ---~~~~lElGGk~p~iV~~dADl~~Aa~~iv~~~f~n~g-~C~a~~~rv~V~~~i~dd~f~~~l~~~~~~~~~------ 572 (716)
||+++|||||||+||++|||+|.|++.+++++|.|+| .|+|+ +|+|||+++| |+|+++|+++++++.+
T Consensus 234 ~~l~~~~lElGG~~~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~-~rv~V~~~i~-d~f~~~l~~~~~~~~~g~p~~~ 311 (467)
T TIGR01804 234 DHLKHVTMELGGKSPLIVFDDADLELAVDQAMNGNFFSAGQVCSNG-TRVFVHNKIK-EKFEARLVERTKRIKLGDGFDE 311 (467)
T ss_pred hcCCcEEEecCCCCeeEECCCCCHHHHHHHHHHHHHHhcCCCCCCC-CEEEEcHHHH-HHHHHHHHHHHHhCCCCCCCCC
Confidence 8999999999999999999999999999999999986 99999 9999999999 7999999999876521
Q ss_pred ----------------------------EE-ecCccc------cc-cc-c-C-----CCCccccccccCceEEEEEeCCH
Q 005047 573 ----------------------------GL-FGGPRA------SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDV 609 (716)
Q Consensus 573 ----------------------------~~-~g~~~~------~~-~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~ 609 (716)
++ .|+... .+ ++ | | +++++++||+||||++|++|+|+
T Consensus 312 ~~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~ 391 (467)
T TIGR01804 312 ATEMGPLISAEHRDKVESYIEKGKEEGATLACGGKRPEREGLQNGFFIEPTVFTDCTDDMTIVREEIFGPVMTVLTFSSE 391 (467)
T ss_pred CCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCeEEeeEEEeCCCCCChHHhCCCCCceEEEEecCCH
Confidence 22 233221 13 23 5 2 46899999999999999999999
Q ss_pred HHHHHHHHhcCCCceeEEEccCHHHHHHHHHccCcceEEEcCCcCCCCCCcccCcceeeccccccccccccchhcccEEE
Q 005047 610 RAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTR 689 (716)
Q Consensus 610 deAi~~aN~~~~GL~a~i~t~d~~~a~~~~~~~~~G~v~vN~~~~~~~~~p~g~g~~sG~~~~~~~~~g~~gl~~ft~~k 689 (716)
||||+++|+++|||++||||+|.+++++|++++++|+|+||++....+..||||.+.||+| +++|++|+++||+.|
T Consensus 392 deai~~~n~~~~gLsa~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G----~~~g~~~~~~~~~~~ 467 (467)
T TIGR01804 392 DEVIARANDTIYGLAAGVFTADLGRAHRVANQLKAGTVWINDFHPYPAEAPWGGYKQSGIG----RENGKAGLAEYTEVK 467 (467)
T ss_pred HHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccCccC----CCChHHHHHHHhccC
Confidence 9999999999999999999999999999999999999999997766677899999999986 356999999999875
No 59
>cd07119 ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like. Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde.
Probab=100.00 E-value=2.2e-72 Score=635.02 Aligned_cols=397 Identities=20% Similarity=0.227 Sum_probs=340.1
Q ss_pred HHHhcCCcceeEEecCCccccchhhHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Q 005047 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSR--RLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQ 345 (716)
Q Consensus 268 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~ 345 (716)
.+|.+|+.++++...+ .+|+++++++|++||+ .|+++|..+|.++|++++++|++++++|++++++|.+++.
T Consensus 18 ~~P~tg~~i~~~~~~~------~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~ 91 (482)
T cd07119 18 INPANGEVIATVPEGT------AEDAKRAIAAARRAFDSGEWPHLPAQERAALLFRIADKIREDAEELARLETLNTGKTL 91 (482)
T ss_pred eCCCCCCEEEEEeCCC------HHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH
Confidence 5678899999998888 8899999999999997 5999999999999999999999999999999887765432
Q ss_pred HhchhHHHHHHhhcCHHHHHHHHHHHHHHhcccc-cccccccccccCCCeEEEEeecceeEEEEEcCC-Cch-hHHHHHH
Q 005047 346 EAGYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIAS 422 (716)
Q Consensus 346 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~-~P~-~~~~~~~ 422 (716)
.++. .|+...++.+++++...+ ..++..+. ..+...+++++|+|||++|+|| ||. +.+++++
T Consensus 92 ----~~a~--------~ev~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~ 156 (482)
T cd07119 92 ----RESE--------IDIDDVANCFRYYAGLATKETGEVYDV---PPHVISRTVREPVGVCGLITPWNYPLLQAAWKLA 156 (482)
T ss_pred ----HHHH--------HHHHHHHHHHHHHHHHHHHhcCccccC---CCCceEEEEEeeeeeEEEEcCCchHHHHHHHHHH
Confidence 1222 256666666776654432 22332221 1344567899999999999998 696 5679999
Q ss_pred HHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CchHHHhhcCCCCccEEEeecCHHHHHHHHHh
Q 005047 423 LAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKES 500 (716)
Q Consensus 423 ~ALaaGNtvv~Kps~~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~ 500 (716)
+||++||+||+|||+.||+|+.++++++.+ + +|+|++|+|+| ++++++.|..||++|+|+||||+++|+.|+++
T Consensus 157 ~ALaaGN~VilKps~~~p~~~~~l~~~~~~----aGlP~gv~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~ 232 (482)
T cd07119 157 PALAAGNTVVIKPSEVTPLTTIALFELIEE----AGLPAGVVNLVTGSGATVGAELAESPDVDLVSFTGGTATGRSIMRA 232 (482)
T ss_pred HHHhcCCEEEEECCccccHHHHHHHHHHHH----cCCCcCcEEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHH
Confidence 999999999999999999999999999986 8 99999999996 55578888899999999999999999999987
Q ss_pred c---CCCEEEecCCcceEEEcCCCCHHHHHHHHHHhcCCCCC-ccccccceEEEeCccCChhhHHHHHHHHHhcCC----
Q 005047 501 T---KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMVETLLVHKDLACNGALNELVVELQHEGV---- 572 (716)
Q Consensus 501 a---~~~~~lElGGk~p~iV~~dADl~~Aa~~iv~~~f~n~g-~C~a~~~rv~V~~~i~dd~f~~~l~~~~~~~~~---- 572 (716)
+ .+|+++|||||||+||++|||+|.|++.+++|+|.|+| .|+++ +|||||+++| |+|+++|+++++++.+
T Consensus 233 aa~~~~~~~lElGGkn~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~-~~v~V~~~i~-d~f~~~l~~~~~~~~~G~~~ 310 (482)
T cd07119 233 AAGNVKKVALELGGKNPNIVFADADFETAVDQALNGVFFNAGQVCSAG-SRLLVEESIH-DKFVAALAERAKKIKLGNGL 310 (482)
T ss_pred HHhcCCcEEEECCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCC-eEEEEcHHHH-HHHHHHHHHHHHhcCCCCCC
Confidence 7 38999999999999999999999999999999999976 99999 9999999999 7999999999887531
Q ss_pred ------------------------------EE-ecCccc------ccc-c-c-C-----CCCccccccccCceEEEEEeC
Q 005047 573 ------------------------------GL-FGGPRA------SKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVD 607 (716)
Q Consensus 573 ------------------------------~~-~g~~~~------~~~-~-p-v-----~~~~~~~eE~FGPVl~v~~~~ 607 (716)
++ .|+... .++ + | | +++++++||+||||++|++|+
T Consensus 311 ~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~ 390 (482)
T cd07119 311 DADTEMGPLVSAEHREKVLSYIQLGKEEGARLVCGGKRPTGDELAKGYFVEPTIFDDVDRTMRIVQEEIFGPVLTVERFD 390 (482)
T ss_pred CCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCceECCEEEecCCCCChHhhCCCCCceEEEeccC
Confidence 12 233321 133 3 5 2 368899999999999999999
Q ss_pred CHHHHHHHHHhcCCCceeEEEccCHHHHHHHHHccCcceEEEcCCcCCCCCCcccCcceeeccccccccccccchhcccE
Q 005047 608 DVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLT 687 (716)
Q Consensus 608 ~~deAi~~aN~~~~GL~a~i~t~d~~~a~~~~~~~~~G~v~vN~~~~~~~~~p~g~g~~sG~~~~~~~~~g~~gl~~ft~ 687 (716)
|+||||+++|+++|||++||||+|.+++.++++++++|+|+||++....+..||||.+.||+| +++|++|+++||+
T Consensus 391 ~~deai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G----~~~G~~~l~~~t~ 466 (482)
T cd07119 391 TEEEAIRLANDTPYGLAGAVWTKDIARANRVARRLRAGTVWINDYHPYFAEAPWGGYKQSGIG----RELGPTGLEEYQE 466 (482)
T ss_pred CHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCcccCcCC----ccchHHHHHHHhc
Confidence 999999999999999999999999999999999999999999987666677899999999986 3569999999999
Q ss_pred EEEEEEcC
Q 005047 688 TRWILRGN 695 (716)
Q Consensus 688 ~k~v~~~~ 695 (716)
.|+|+++.
T Consensus 467 ~k~v~~~~ 474 (482)
T cd07119 467 TKHININL 474 (482)
T ss_pred eEEEEEec
Confidence 99998864
No 60
>TIGR01237 D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative. This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs.
Probab=100.00 E-value=4.1e-72 Score=634.86 Aligned_cols=398 Identities=17% Similarity=0.183 Sum_probs=335.7
Q ss_pred HHHhc-CCcceeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Q 005047 268 IKVLE-GKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 346 (716)
Q Consensus 268 ~~~~t-g~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~ 346 (716)
.+|.+ ++.++++..++ .+|+++++++|++||+.|+++|.++|.++|++++++|++++++|++++++|.+++..
T Consensus 51 ~~P~~~~~~i~~~~~~~------~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ 124 (511)
T TIGR01237 51 INPCDPSEVVGKVGKAS------VEQAEHALQIAKKAFEAWKKTPVRERAGILRKAAAIMERRRHELNALICLEVGKIIP 124 (511)
T ss_pred ECCCCCCcEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHcCCCHH
Confidence 56784 88899998888 889999999999999999999999999999999999999999999998877654321
Q ss_pred hchhHHHHHHhhcCHHHHHHHHHHHHHHhccccc-ccccccccccCCCeEEEEeecceeEEEEEcCC-Cch-hHHHHHHH
Q 005047 347 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 423 (716)
Q Consensus 347 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~-~P~-~~~~~~~~ 423 (716)
++ ..|+...++.+++++...+. .+...+. ...+...+++|+|+|||++|+|| ||. +++++++|
T Consensus 125 ----~a--------~~ev~~~~~~~~~~a~~~~~~~~~~~~~--~~~~~~~~~~~~P~GVV~~I~P~N~P~~~~~~~i~~ 190 (511)
T TIGR01237 125 ----EA--------DAEVAEAIDFCEYYAREMERLAGQGVNL--DIEGETNRYFYQPRGVAVVISPWNFPMAIAVGMTVA 190 (511)
T ss_pred ----HH--------HHHHHHHHHHHHHHHHHHHHhcCccccC--CCCCceeEEEEecceeEEEECCCCcHHHHHHHHHHH
Confidence 22 12455566666665543321 2222111 11234567889999999999998 685 57899999
Q ss_pred HHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CchHHHhhcCCCCccEEEeecCHHHHHHHHHhc
Q 005047 424 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST 501 (716)
Q Consensus 424 ALaaGNtvv~Kps~~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a 501 (716)
||++||+||+|||+.||+++.++++++.+ + +|+|++|+|+| +.++++.|..||++++|+||||+++|+.|++.+
T Consensus 191 ALaaGN~VVlKPs~~tp~~~~~l~~~~~~----aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~a 266 (511)
T TIGR01237 191 PIVTGNCVVLKPAETSTVIAAKIVEILIE----AGLPPGVFQFVPGKGSEVGSYLVNHPKTHLITFTGSREVGCRIYEDA 266 (511)
T ss_pred HHHcCCEEEEECCCCCcHHHHHHHHHHHH----hCCCCCcEEEccCCCchhHHHHhcCCCCCeEEEECchHHHHHHHHHH
Confidence 99999999999999999999999999986 7 99999999996 567888899999999999999999999998765
Q ss_pred C---------CCEEEecCCcceEEEcCCCCHHHHHHHHHHhcCCCCC-ccccccceEEEeCccCChhhHHHHHHHHHhcC
Q 005047 502 K---------IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMVETLLVHKDLACNGALNELVVELQHEG 571 (716)
Q Consensus 502 ~---------~~~~lElGGk~p~iV~~dADl~~Aa~~iv~~~f~n~g-~C~a~~~rv~V~~~i~dd~f~~~l~~~~~~~~ 571 (716)
. +|+++|||||||+||++|||++.|++.+++++|.|+| .|+|+ +|+|||+++| |+|+++|+++++++.
T Consensus 267 a~~~~~~~~~~~~~lElgG~~p~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~-~rv~V~~~i~-d~f~~~L~~~~~~l~ 344 (511)
T TIGR01237 267 AKVQPGQKHLKRVIAEMGGKDAIIVDESADIEQAVAGAVYSAFGFTGQKCSAC-SRVVVLSPVY-DAVVERFVEATRSLN 344 (511)
T ss_pred hcccccccccceeEeccCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCcccc-eEEEEehhHH-HHHHHHHHHHHHhCC
Confidence 3 6999999999999999999999999999999999987 99999 9999999999 799999999998763
Q ss_pred C---------------------------------E-EecCccc--ccc-c-c-C-----CCCccccccccCceEEEEEeC
Q 005047 572 V---------------------------------G-LFGGPRA--SKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVD 607 (716)
Q Consensus 572 ~---------------------------------~-~~g~~~~--~~~-~-p-v-----~~~~~~~eE~FGPVl~v~~~~ 607 (716)
+ + +.|+... .++ + | | ++|++++||+||||++|++|+
T Consensus 345 ~g~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~g~~l~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPVl~v~~~~ 424 (511)
T TIGR01237 345 VGPTDDPSTQVGPVIDQKSQAKIQEYIEQGKAEGELAIGGCDAPSEGYFIGPTIFKDVDRHARLAQEEIFGPVVAIIRAA 424 (511)
T ss_pred CCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCCcEEECCccCCCCCeEEcCEEEeCCCCCChHhhCCCcCCeEEEEeeC
Confidence 2 1 1233211 133 3 5 2 468999999999999999999
Q ss_pred CHHHHHHHHHhcCCCceeEEEccCHHHHHHHHHccCcceEEEcCCcCC--CCCCcccCcceeeccccccccccccchhcc
Q 005047 608 DVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRF--CDGARFGLGAEVGISTSRIHARGPVGVEGL 685 (716)
Q Consensus 608 ~~deAi~~aN~~~~GL~a~i~t~d~~~a~~~~~~~~~G~v~vN~~~~~--~~~~p~g~g~~sG~~~~~~~~~g~~gl~~f 685 (716)
|+||||+++|+++|||++||||+|.+++.++++++++|+|+||+.... .+..||||.+.||+|. +++|++|+++|
T Consensus 425 ~~deai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~k~SG~G~---~~~g~~~l~~~ 501 (511)
T TIGR01237 425 DFDEALEIANGTEYGLTGGVYSNTRDHIERAAAEFEVGNLYFNRTITGAIVGRQPFGGFKMSGTDS---KAGGPDYLLQF 501 (511)
T ss_pred CHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccccCCC---cCCCHHHHHHh
Confidence 999999999999999999999999999999999999999999987543 2457999999999862 24689999999
Q ss_pred cEEEEEEEc
Q 005047 686 LTTRWILRG 694 (716)
Q Consensus 686 t~~k~v~~~ 694 (716)
|+.|+|+.+
T Consensus 502 ~~~k~v~~~ 510 (511)
T TIGR01237 502 MQPKTVTEN 510 (511)
T ss_pred cceEEEEEe
Confidence 999999765
No 61
>cd07118 ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydrogenase-like. Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase.
Probab=100.00 E-value=2.2e-72 Score=629.60 Aligned_cols=394 Identities=21% Similarity=0.242 Sum_probs=337.5
Q ss_pred HHhcCCcceeEEecCCccccchhhHHHHHHHHHHHHHH--HhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Q 005047 269 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRR--LQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 346 (716)
Q Consensus 269 ~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~--w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~ 346 (716)
+|.+++.++++..++ .+|+++++++|++||+. |+++|.++|.++|++++++|++|+++|++++.+|.+++.
T Consensus 3 ~P~t~~~i~~~~~~~------~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~l~~~a~~l~~~~~~la~~~~~e~Gk~~- 75 (454)
T cd07118 3 SPAHGVVVARYAEGT------VEDVDAAVAAARKAFDKGPWPRMSGAERAAVLLKVADLIRARRERLALIETLESGKPI- 75 (454)
T ss_pred CCCCCCEEEEEeCCC------HHHHHHHHHHHHHHcCCCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH-
Confidence 467899999999988 88999999999999985 999999999999999999999999999999887765432
Q ss_pred hchhHHHHHHhhcCHHHHHHHHHHHHHHhccccc-ccccccccccCCCeEEEEeecceeEEEEEcCC-Cch-hHHHHHHH
Q 005047 347 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 423 (716)
Q Consensus 347 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~-~P~-~~~~~~~~ 423 (716)
.++ ..|++..++.+++++.+.+. .+...+. ...+...++.|+|+|||++|+|| ||+ ++++++++
T Consensus 76 ---~~a--------~~ev~~~i~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~i~~ 142 (454)
T cd07118 76 ---SQA--------RGEIEGAADLWRYAASLARTLHGDSYNN--LGDDMLGLVLREPIGVVGIITPWNFPFLILSQKLPF 142 (454)
T ss_pred ---HHH--------HHHHHHHHHHHHHHHHHHHHhcCccccc--CCCCceeeEEeecceEEEEECCCCcHHHHHHHHHHH
Confidence 122 24666777777766654321 2222211 11234567889999999999998 796 56899999
Q ss_pred HHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CchHHHhhcCCCCccEEEeecCHHHHHHHHHhc
Q 005047 424 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST 501 (716)
Q Consensus 424 ALaaGNtvv~Kps~~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a 501 (716)
||++||+||+|||+.||.++.++++++.+ + +|+|++|+|++ +.++++.|..||+||+|+||||+++|+.|++.+
T Consensus 143 ALaaGN~Vi~Kps~~~p~~~~~l~~~~~~----aG~P~g~~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a 218 (454)
T cd07118 143 ALAAGCTVVVKPSEFTSGTTLMLAELLIE----AGLPAGVVNIVTGYGATVGQAMTEHPDVDMVSFTGSTRVGKAIAAAA 218 (454)
T ss_pred HHhcCCEEEEECCCCCcHHHHHHHHHHHh----cCCCccceEEEecCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHH
Confidence 99999999999999999999999999986 7 99999999996 556788888999999999999999999999876
Q ss_pred ---CCCEEEecCCcceEEEcCCCCHHHHHHHHHHhcCCCCC-ccccccceEEEeCccCChhhHHHHHHHHHhcCC-----
Q 005047 502 ---KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMVETLLVHKDLACNGALNELVVELQHEGV----- 572 (716)
Q Consensus 502 ---~~~~~lElGGk~p~iV~~dADl~~Aa~~iv~~~f~n~g-~C~a~~~rv~V~~~i~dd~f~~~l~~~~~~~~~----- 572 (716)
.+|+++|||||||+||++|||+|.|++.+++|+|.|+| .|+|+ +|+|||+++| |+|+++|+++++++.+
T Consensus 219 a~~~~~~~lelgG~n~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~-~rv~V~~~i~-d~f~~~L~~~~~~l~~g~p~~ 296 (454)
T cd07118 219 ARNLKKVSLELGGKNPQIVFADADLDAAADAVVFGVYFNAGECCNSG-SRLLVHESIA-DAFVAAVVARSRKVRVGDPLD 296 (454)
T ss_pred HhcCCcEEeccCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCCCC-ceEEEcHHHH-HHHHHHHHHHHHhcCcCCCCC
Confidence 38999999999999999999999999999999999976 99999 9999999999 7999999999887532
Q ss_pred -----------------------------EE-ecCccc---ccc-c-c-C-----CCCccccccccCceEEEEEeCCHHH
Q 005047 573 -----------------------------GL-FGGPRA---SKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRA 611 (716)
Q Consensus 573 -----------------------------~~-~g~~~~---~~~-~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~de 611 (716)
++ .|+... .++ + | | +++++++||+||||++|++|+|+||
T Consensus 297 ~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~e 376 (454)
T cd07118 297 PETKVGAIINEAQLAKITDYVDAGRAEGATLLLGGERLASAAGLFYQPTIFTDVTPDMAIAREEIFGPVLSVLTFDTVDE 376 (454)
T ss_pred CCCcCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCCCCCCCCCeEEeCEEEeCCCCCCHHHhCCCCCceEEEEEECCHHH
Confidence 11 233221 133 3 5 2 3589999999999999999999999
Q ss_pred HHHHHHhcCCCceeEEEccCHHHHHHHHHccCcceEEEcCCcCCCCCCcccCcceeeccccccccccccchhcccEEEEE
Q 005047 612 AIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWI 691 (716)
Q Consensus 612 Ai~~aN~~~~GL~a~i~t~d~~~a~~~~~~~~~G~v~vN~~~~~~~~~p~g~g~~sG~~~~~~~~~g~~gl~~ft~~k~v 691 (716)
||+++|+++|||++||||+|.++++++++++++|.|+||+.....+..||||.+.||+| +++|++|+++||+.|++
T Consensus 377 ai~~~n~~~~gL~~~vft~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~PfgG~~~SG~G----~~~g~~~l~~~t~~k~~ 452 (454)
T cd07118 377 AIALANDTVYGLSAGVWSKDIDTALTVARRIRAGTVWVNTFLDGSPELPFGGFKQSGIG----RELGRYGVEEYTELKTV 452 (454)
T ss_pred HHHHHhCCCccceEEEECCCHHHHHHHHHhcCcCEEEECCCCCCCCCCCcCCcccccCC----cCchHHHHHHHhceeEE
Confidence 99999999999999999999999999999999999999998776678899999999986 35699999999999998
Q ss_pred E
Q 005047 692 L 692 (716)
Q Consensus 692 ~ 692 (716)
+
T Consensus 453 ~ 453 (454)
T cd07118 453 H 453 (454)
T ss_pred e
Confidence 5
No 62
>TIGR01236 D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehydrogenase, group 1. This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate.
Probab=100.00 E-value=4.4e-72 Score=634.45 Aligned_cols=400 Identities=19% Similarity=0.194 Sum_probs=334.8
Q ss_pred HHHHhc-CCcceeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH-hCHHHHHHHHHHHHHHH
Q 005047 267 IIKVLE-GKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALE-ANESLIKVENEADVAAA 344 (716)
Q Consensus 267 l~~~~t-g~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~-~~~~el~~~~~~d~~~~ 344 (716)
+.+|.+ ++.++++..++ .+|+++|+++|++||+.|+++|..+|.++|++++++|+ +++++|++++++|+++.
T Consensus 50 ~~nP~t~g~~i~~~~~~~------~~~v~~av~~A~~a~~~W~~~~~~~R~~~L~k~a~~l~~~~~~~la~~~~~e~GK~ 123 (533)
T TIGR01236 50 QVQPHNHQAVLAKATNAT------EEDAAKAVEAALDAKKDWSALPFYDRAAIFLKAADLLSGPYREEILAATMLGQSKN 123 (533)
T ss_pred EECCCCCCeEEEEEeCCC------HHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhhcHHHHHHHHHHHcCCc
Confidence 467886 78899998888 89999999999999999999999999999999999999 59999999888776544
Q ss_pred HHhchhHHHHHHhhcCHHHHHHHHHHHHHHhccccc-ccccccccccCCCeEEEEeecce-eEEEEEcCC-Cch-hHHHH
Q 005047 345 QEAGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPL-GVLLIVFES-RPD-ALVQI 420 (716)
Q Consensus 345 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~Pl-GVv~~I~p~-~P~-~~~~~ 420 (716)
.. ++. .+++...++.+++++.+.+. .+...+. ...+...++.++|+ |||++|+|| ||. +..++
T Consensus 124 ~~----~a~-------~e~v~~~i~~~~~~a~~a~~~~~~~~~~--~~~~~~~~~~~~P~~GVv~~I~PwN~P~~~~~~~ 190 (533)
T TIGR01236 124 VY----QAE-------IDAVAELIDFFRFNVKYARELYEQQPSE--SAPGEWNRTDYRPLEGFVYAISPFNFTAIAGNLP 190 (533)
T ss_pred HH----HHh-------HhHHHHHHHHHHHHHHHHHHhcCccccC--CCCCceeEEEEecCCCEEEEEeCCchHHHHHHHH
Confidence 21 221 12355666777776654332 2222111 11234567889999 999999999 685 46789
Q ss_pred HHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CchHHHhhcCCCCccEEEeecCHHHHHHHH
Q 005047 421 ASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIK 498 (716)
Q Consensus 421 ~~~ALaaGNtvv~Kps~~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~ 498 (716)
+++|| +||+||+|||++||+++.+|++++.+ + ||+|+||+|+| +.++++.|..||+|++|+||||+++|+.|+
T Consensus 191 ~a~AL-aGN~VVlKPs~~tp~~~~~l~~~~~~----aGlP~gvv~vv~g~~~~~g~~Lv~~p~v~~V~FTGS~~~G~~i~ 265 (533)
T TIGR01236 191 GAPAL-MGNTVIWKPSITATLSNYLTMRILEE----AGLPPGVINFVPGDGFAVSDVVLADPRLAGIHFTGSTATFKHLW 265 (533)
T ss_pred HHHHH-hCCeEEEECCCcCCHHHHHHHHHHHh----cCCCCCcEEEEecCcHHHHHHHhcCCCcCEEEEECCHHHHHHHH
Confidence 99999 89999999999999999999999986 8 99999999996 567888888999999999999999999999
Q ss_pred HhcC---C------CEEEecCCcceEEEcCCCCHHHHHHHHHHhcCCCCC-ccccccceEEEeCccCChhhHHHHHHHHH
Q 005047 499 ESTK---I------PVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMVETLLVHKDLACNGALNELVVELQ 568 (716)
Q Consensus 499 ~~a~---~------~~~lElGGk~p~iV~~dADl~~Aa~~iv~~~f~n~g-~C~a~~~rv~V~~~i~dd~f~~~l~~~~~ 568 (716)
+.++ + ++++|||||||+||++|||+|.|++.+++|+|.|+| +|+|+ +|+|||++|| |+|+++|+++++
T Consensus 266 ~~aa~~l~~~~~~~~v~lElGGknp~IV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~-~rv~V~~~i~-d~f~~~l~~~~~ 343 (533)
T TIGR01236 266 KWVASNLDRYHNFPRIVGETGGKDFHVVHPSADIDHAVTATIRGAFEYQGQKCSAA-SRLYVPHSVW-PRFKDELLAELA 343 (533)
T ss_pred HHHHhhccccccCCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhhCCCCCcCC-eeEEEchhHH-HHHHHHHHHHHh
Confidence 8763 4 499999999999999999999999999999999987 99999 9999999999 799999999988
Q ss_pred hcCC------------------------------------EE-ecCccc--cccc--c-C-----CCCccccccccCceE
Q 005047 569 HEGV------------------------------------GL-FGGPRA--SKLL--Q-I-----PETRLFHHEYNSMVC 601 (716)
Q Consensus 569 ~~~~------------------------------------~~-~g~~~~--~~~~--p-v-----~~~~~~~eE~FGPVl 601 (716)
++.+ ++ +|+... .++| | | ++|++++||+||||+
T Consensus 344 ~l~~G~p~d~~t~~Gpli~~~~~~~v~~~i~~a~~~Ga~a~vl~GG~~~~~~G~~~~PTvl~~~~~d~~i~~eE~FGPVl 423 (533)
T TIGR01236 344 EVKVGDPDDFSNFMGAVIDERSFVKNVKYIERAKGDPAELTILYGGKYDDSEGYFVEPTVILSKDPTDPLMVEEIFGPVL 423 (533)
T ss_pred cCCcCCCCCCCCcccccCCHHHHHHHHHHHHHHHhcCCceEEEeCCCcCCCCCeEEeeEEEecCCCCChhhcccCCCCeE
Confidence 7521 12 133221 1333 5 2 468999999999999
Q ss_pred EEEEeCC--HHHHHHHH-HhcCCCceeEEEccCHHHHHHHHHccC--cceEEEcCCcCCC--CCCcccCcceeecccccc
Q 005047 602 TVEIVDD--VRAAIDHI-HQHGSAHTDCIVAEDQKVAETFLCQVD--SAAVFHNASTRFC--DGARFGLGAEVGISTSRI 674 (716)
Q Consensus 602 ~v~~~~~--~deAi~~a-N~~~~GL~a~i~t~d~~~a~~~~~~~~--~G~v~vN~~~~~~--~~~p~g~g~~sG~~~~~~ 674 (716)
+|++|+| +||||+++ |+++|||++||||+|.+++.+++++++ +|+||||+..... +..||||.+.||+|+
T Consensus 424 ~v~~~~~~~~~eai~~~~n~~~~gL~a~Vft~d~~~a~~~~~~l~~~~G~v~IN~~~~~~~~~~~PfGG~k~SG~G~--- 500 (533)
T TIGR01236 424 TVYVYPDDKYKEILDVVDSTSRYGLTGAVFAKDRQAILEADKRLRFAAGNFYINDKPTGAVVGQQPFGGARGSGTND--- 500 (533)
T ss_pred EEEEeCCCCHHHHHHHHhcCCCcCceEEEEeCCHHHHHHHHHHhhhcCcEEEECCCCCCCCCCCCCCCCcccccCCc---
Confidence 9999998 59999999 899999999999999999999999977 9999999865432 568999999999862
Q ss_pred ccccccchhcccEEEEEEEcC
Q 005047 675 HARGPVGVEGLLTTRWILRGN 695 (716)
Q Consensus 675 ~~~g~~gl~~ft~~k~v~~~~ 695 (716)
+++|++|+++|++.|++....
T Consensus 501 ~~~g~~~l~~f~~~k~v~~~~ 521 (533)
T TIGR01236 501 KAGGPLNLLRWTSARSIKETF 521 (533)
T ss_pred ccCCHHHHHHhcceEEEEEEc
Confidence 356899999999999987754
No 63
>cd07091 ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins. ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the co
Probab=100.00 E-value=3.4e-72 Score=632.52 Aligned_cols=397 Identities=17% Similarity=0.185 Sum_probs=339.8
Q ss_pred HHHHhcCCcceeEEecCCccccchhhHHHHHHHHHHHHHHHh--cCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Q 005047 267 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQ--ALQSQDRRKILLDVADALEANESLIKVENEADVAAA 344 (716)
Q Consensus 267 l~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~--~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~ 344 (716)
+.+|.+++.++++...+ .+++++++++|++||+.|+ ++|.++|.++|++++++|++++++|++++.+|.+++
T Consensus 23 ~~~P~t~~~i~~~~~~~------~~~v~~av~~A~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~ 96 (476)
T cd07091 23 TINPATEEVICQVAEAD------EEDVDAAVKAARAAFETGWWRKMDPRERGRLLNKLADLIERDRDELAALESLDNGKP 96 (476)
T ss_pred eECCCCCCEEEEEeCCC------HHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCC
Confidence 35678899999998888 8899999999999999854 999999999999999999999999999988776543
Q ss_pred HHhchhHHHHHHhhcCHHHHHHHHHHHHHHhccccc-ccccccccccCCCeEEEEeecceeEEEEEcCC-Cch-hHHHHH
Q 005047 345 QEAGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIA 421 (716)
Q Consensus 345 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~-~P~-~~~~~~ 421 (716)
.. +.. ..|+..+++.+++++.+.+. .++..+. ..+...+++++|+|||++|+|| ||. ++++++
T Consensus 97 ~~----~~~-------~~ev~~~~~~~~~~a~~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~ 162 (476)
T cd07091 97 LE----ESA-------KGDVALSIKCLRYYAGWADKIQGKTIPI---DGNFLAYTRREPIGVCGQIIPWNFPLLMLAWKL 162 (476)
T ss_pred HH----HHH-------HHHHHHHHHHHHHHHHHHHHhcCccccC---CCCceEEEEEeceeEEEEECCCcCHHHHHHHHH
Confidence 21 111 23677777777777655432 2332221 1344567899999999999998 796 567999
Q ss_pred HHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CchHHHhhcCCCCccEEEeecCHHHHHHHHH
Q 005047 422 SLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKE 499 (716)
Q Consensus 422 ~~ALaaGNtvv~Kps~~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~ 499 (716)
+|||++||+||+|||+.||.|+.++++++.+ + ||+|++|+|++ +.++++.|..||+||+|+||||+++|+.|++
T Consensus 163 ~~AL~aGN~VvlKps~~~p~~~~~l~~~~~~----aglP~g~~~~v~g~~~~~~~~L~~~~~vd~V~fTGs~~~g~~v~~ 238 (476)
T cd07091 163 APALAAGNTVVLKPAEQTPLSALYLAELIKE----AGFPPGVVNIVPGFGPTAGAAISSHMDVDKIAFTGSTAVGRTIME 238 (476)
T ss_pred HHHHHcCCEEEEeCCCCChHHHHHHHHHHHH----cCcCCCcEEEEeCCChhHHHHHhcCCCcCEEEEECcHHHHHHHHH
Confidence 9999999999999999999999999999986 8 99999999996 6678888889999999999999999999998
Q ss_pred hcC----CCEEEecCCcceEEEcCCCCHHHHHHHHHHhcCCCCC-ccccccceEEEeCccCChhhHHHHHHHHHhcCC--
Q 005047 500 STK----IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMVETLLVHKDLACNGALNELVVELQHEGV-- 572 (716)
Q Consensus 500 ~a~----~~~~lElGGk~p~iV~~dADl~~Aa~~iv~~~f~n~g-~C~a~~~rv~V~~~i~dd~f~~~l~~~~~~~~~-- 572 (716)
.+. +|+++|||||||+||++|||+|.|++.+++|+|.|+| .|+|+ +|||||+++| |+|+++|+++++++.+
T Consensus 239 ~aa~~~~~~~~lElgG~~~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~-~rv~V~~~v~-~~f~~~L~~~~~~~~~g~ 316 (476)
T cd07091 239 AAAKSNLKKVTLELGGKSPNIVFDDADLDKAVEWAAFGIFFNQGQCCCAG-SRIFVQESIY-DEFVEKFKARAEKRVVGD 316 (476)
T ss_pred HHHhcCCceEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhccCCCCcCC-cEEEEeHHHH-HHHHHHHHHHHhhCCCCC
Confidence 763 7999999999999999999999999999999999976 99999 9999999999 7999999999887531
Q ss_pred --------------------------------EE-ecCccc--cc-cc-c-C-----CCCccccccccCceEEEEEeCCH
Q 005047 573 --------------------------------GL-FGGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDV 609 (716)
Q Consensus 573 --------------------------------~~-~g~~~~--~~-~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~ 609 (716)
++ +|+... .+ ++ | | +++++++||+||||++|++|+|+
T Consensus 317 p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ga~vl~gg~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~ 396 (476)
T cd07091 317 PFDPDTFQGPQVSKAQFDKILSYIESGKKEGATLLTGGERHGSKGYFIQPTVFTDVKDDMKIAKEEIFGPVVTILKFKTE 396 (476)
T ss_pred CCCCCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCceECcEEecCCCCCChhhhCCCCCCeEEEeecCCH
Confidence 12 233221 12 33 5 2 35789999999999999999999
Q ss_pred HHHHHHHHhcCCCceeEEEccCHHHHHHHHHccCcceEEEcCCcCCCCCCcccCcceeeccccccccccccchhcccEEE
Q 005047 610 RAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTR 689 (716)
Q Consensus 610 deAi~~aN~~~~GL~a~i~t~d~~~a~~~~~~~~~G~v~vN~~~~~~~~~p~g~g~~sG~~~~~~~~~g~~gl~~ft~~k 689 (716)
||||+++|+++|||++||||+|.++++++++++++|+|+||++....+.+||||.+.||+| +++|++|+++||+.|
T Consensus 397 ~eai~~~n~~~~gLsa~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~k~SG~G----~~~g~~~~~~f~~~k 472 (476)
T cd07091 397 DEVIERANDTEYGLAAGVFTKDINKALRVSRALKAGTVWVNTYNVFDAAVPFGGFKQSGFG----RELGEEGLEEYTQVK 472 (476)
T ss_pred HHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCcccCcCC----ccchHHHHHHhhcee
Confidence 9999999999999999999999999999999999999999997777778999999999986 356999999999999
Q ss_pred EEEE
Q 005047 690 WILR 693 (716)
Q Consensus 690 ~v~~ 693 (716)
++++
T Consensus 473 ~~~~ 476 (476)
T cd07091 473 AVTI 476 (476)
T ss_pred EEeC
Confidence 9863
No 64
>TIGR03250 PhnAcAld_DH putative phosphonoacetaldehyde dehydrogenase. It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme.
Probab=100.00 E-value=7.4e-72 Score=627.39 Aligned_cols=397 Identities=18% Similarity=0.180 Sum_probs=333.3
Q ss_pred HHHhcCCcceeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHh
Q 005047 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 347 (716)
Q Consensus 268 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~ 347 (716)
.+|.+++.++++..++ .+|+++|+++|++|| +.++..+|.++|++++++|+++++||++++++|+|++..
T Consensus 22 ~~P~t~~~i~~~~~~~------~~~v~~av~~A~~a~---~~~~~~~R~~~l~~~a~~l~~~~~ela~~~~~e~Gk~~~- 91 (472)
T TIGR03250 22 RYPYNGTVVGTVPKAS------VDDVRRAFAIAAAYR---PTLTRYERSAILDRAAALLAARKEEISDLITLESGLSKK- 91 (472)
T ss_pred ECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHH---hhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHH-
Confidence 4678899999998888 889999999999886 478999999999999999999999999998877654431
Q ss_pred chhHHHHHHhhcCHHHHHHHHHHHHHHhcccc-ccccccccc--ccCCCeEEEEeecce-eEEEEEcCC-Cch-hHHHHH
Q 005047 348 GYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRT--ELADGLILEKTSCPL-GVLLIVFES-RPD-ALVQIA 421 (716)
Q Consensus 348 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~--~~~~~~~~~~~~~Pl-GVv~~I~p~-~P~-~~~~~~ 421 (716)
++ ..|+...++.+++++.... ..+...+.. ....+...+++|+|+ |||++|+|| ||. ++++++
T Consensus 92 ---~a--------~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~Gvv~~I~P~N~P~~~~~~~~ 160 (472)
T TIGR03250 92 ---DS--------LYEVGRVADVLTFAAAEALRDDGQIFSCDLTPHGKARKVFTQREPLLGVISAITPFNHPMNQVAHKI 160 (472)
T ss_pred ---HH--------HHHHHHHHHHHHHHHHHHHHhcCcccccccCCCCCCceEEEEEcCCCCEEEEEcCCcHHHHHHHHHH
Confidence 22 2356667777777664432 223222110 001234568899998 999999999 685 578999
Q ss_pred HHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CchHHHhhcCCCCccEEEeecCHHHHHHHHH
Q 005047 422 SLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKE 499 (716)
Q Consensus 422 ~~ALaaGNtvv~Kps~~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~ 499 (716)
++||++||+||+|||++||+++.++++++.+ + +|+|++|+|+| +.+++..|..||++++|+||||+++|+.|++
T Consensus 161 ~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~----aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~ 236 (472)
T TIGR03250 161 APAIATNNRMVVKPSEKTPLSALYLADILYE----AGLPPQMLQVVTGDPREIADELITNPHVDLVTFTGGVAIGKYIAA 236 (472)
T ss_pred HHHHHcCCEEEEECCCcchHHHHHHHHHHHH----cCCCcccEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHH
Confidence 9999999999999999999999999999986 7 99999999996 5667888888999999999999999999998
Q ss_pred hcC-CCEEEecCCcceEEEcCCCCHHHHHHHHHHhcCCCCC-ccccccceEEEeCccCChhhHHHHHHHHHhcCC-----
Q 005047 500 STK-IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMVETLLVHKDLACNGALNELVVELQHEGV----- 572 (716)
Q Consensus 500 ~a~-~~~~lElGGk~p~iV~~dADl~~Aa~~iv~~~f~n~g-~C~a~~~rv~V~~~i~dd~f~~~l~~~~~~~~~----- 572 (716)
.+. +|++||||||||+||++|||++.|++.+++++|.|+| .|+|+ +|+|||+++| |+|+++|++++++++.
T Consensus 237 ~a~~~~~~lElGGk~p~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~-~rv~V~~~i~-d~f~~~l~~~~~~~~~G~p~~ 314 (472)
T TIGR03250 237 RAGYRRQVLELGGNDPLIVMEDADLDRAADLAVKGSYKNSGQRCTAV-KRMLVQESVA-DRFTELLVEKTRAWRYGDPMD 314 (472)
T ss_pred HhcCCceEEecCCCCeEEECCCCCHHHHHHHHHHHHHHhhCCCCCCC-cEEEEeHhHH-HHHHHHHHHHHHhcCCCCCCC
Confidence 774 8999999999999999999999999999999999987 99999 9999999999 7999999999887632
Q ss_pred -----------------------------EE-ecCccccccc-c-C-----CCCccccccccCceEEEEEeCCHHHHHHH
Q 005047 573 -----------------------------GL-FGGPRASKLL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDH 615 (716)
Q Consensus 573 -----------------------------~~-~g~~~~~~~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~ 615 (716)
++ .|+.....|+ | | ++|++++||+||||++|++|+|+||||++
T Consensus 315 ~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~~g~~~~PTvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~ 394 (472)
T TIGR03250 315 PSVDMGTVIDEAAAILFEARVNEAIAQGARLLLGNVRDGALYAPTVLDRVDPSMTLVREETFGPVSPVIRFCDIDDAIRI 394 (472)
T ss_pred CCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCcCCEEEcCEEEeCCCCCChHHhCCCcCCeEEEEEeCCHHHHHHH
Confidence 11 1222211233 5 2 46899999999999999999999999999
Q ss_pred HHhcCCCceeEEEccCHHHHHHHHHccCcceEEEcCCcCCC-CCCcccCcceeeccccccccccccchhcccEEEEEEEc
Q 005047 616 IHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFC-DGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRG 694 (716)
Q Consensus 616 aN~~~~GL~a~i~t~d~~~a~~~~~~~~~G~v~vN~~~~~~-~~~p~g~g~~sG~~~~~~~~~g~~gl~~ft~~k~v~~~ 694 (716)
+|+++|||++||||+|.+++.++++++++|+||||+.+... +.+||||.+.||+|. +++|++|+++||+.|+++++
T Consensus 395 aN~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~---~~g~~~~l~~ft~~k~i~~~ 471 (472)
T TIGR03250 395 SNSTAYGLSSGVCTNRLDYITRFIAELQVGTVNVWEVPGYRLELTPFGGIKDSGLGY---KEGVQEAMKSFTNLKTYSLP 471 (472)
T ss_pred HhCCCccceEEEEcCCHHHHHHHHHHCCcceEEEcCCCCCCCCCCCCCccccccCCC---CCChHHHHHHhhceEEEEEe
Confidence 99999999999999999999999999999999999865443 458999999999862 23568999999999999875
No 65
>cd07123 ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17. Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences.
Probab=100.00 E-value=6.8e-72 Score=633.44 Aligned_cols=399 Identities=18% Similarity=0.193 Sum_probs=332.5
Q ss_pred HHHHhc-CCcceeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHHHH
Q 005047 267 IIKVLE-GKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEA-NESLIKVENEADVAAA 344 (716)
Q Consensus 267 l~~~~t-g~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~-~~~el~~~~~~d~~~~ 344 (716)
+.+|.+ |+.++++..++ .+|+++++++|++||+.|+++|..+|.++|++++++|++ ++++|++++.+|.++.
T Consensus 50 v~~P~~tg~~l~~~~~~~------~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~~ela~~~~~e~Gk~ 123 (522)
T cd07123 50 QVMPHDHAHVLATYHYAD------AALVEKAIEAALEARKEWARMPFEDRAAIFLKAADLLSGKYRYELNAATMLGQGKN 123 (522)
T ss_pred EECCCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhhCHHHHHHHHHHhcCCC
Confidence 467884 89999998888 899999999999999999999999999999999999997 8999999887665443
Q ss_pred HHhchhHHHHHHhhcCHHHHHHHHHHHHHHhccccc-ccccccccccCCCeEEEEeecce-eEEEEEcCC-Cch-hHHHH
Q 005047 345 QEAGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPL-GVLLIVFES-RPD-ALVQI 420 (716)
Q Consensus 345 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~Pl-GVv~~I~p~-~P~-~~~~~ 420 (716)
.. ++. ..++...++.+++++...+. .+...+. ...+...+++++|+ |||++|+|| ||. +..++
T Consensus 124 ~~----~a~-------~~~v~~~~~~~~~~a~~~~~~~~~~~~~--~~~~~~~~~~~~P~~GVv~~I~PwNfP~~~~~~~ 190 (522)
T cd07123 124 VW----QAE-------IDAACELIDFLRFNVKYAEELYAQQPLS--SPAGVWNRLEYRPLEGFVYAVSPFNFTAIGGNLA 190 (522)
T ss_pred HH----HHh-------HHHHHHHHHHHHHHHHHHHHhcCccccC--CCCCceeEEEEecCCceEEEECCcccHHHHHHHH
Confidence 21 221 12455556666665543321 2222111 11234567889999 999999998 685 56789
Q ss_pred HHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CchHHHhhcCCCCccEEEeecCHHHHHHHH
Q 005047 421 ASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIK 498 (716)
Q Consensus 421 ~~~ALaaGNtvv~Kps~~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~ 498 (716)
++||| +||+||+|||++||+++.+|++++.+ + ||+|+||+|+| ++++++.|..||+|++|+||||+++|+.|+
T Consensus 191 ~~pal-aGN~VVlKPs~~tp~~~~~l~~~l~~----aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~V~FTGS~~~G~~i~ 265 (522)
T cd07123 191 GAPAL-MGNVVLWKPSDTAVLSNYLVYKILEE----AGLPPGVINFVPGDGPVVGDTVLASPHLAGLHFTGSTPTFKSLW 265 (522)
T ss_pred HHHHH-hCCEEEEECCCCCCHHHHHHHHHHHH----cCcCCCcEEEEecCchHHHHHHhcCCCcCEEEEECCHHHHHHHH
Confidence 99999 69999999999999999999999986 8 99999999996 566888899999999999999999999999
Q ss_pred HhcC---C------CEEEecCCcceEEEcCCCCHHHHHHHHHHhcCCCCC-ccccccceEEEeCccCChhhHHHHHHHHH
Q 005047 499 ESTK---I------PVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMVETLLVHKDLACNGALNELVVELQ 568 (716)
Q Consensus 499 ~~a~---~------~~~lElGGk~p~iV~~dADl~~Aa~~iv~~~f~n~g-~C~a~~~rv~V~~~i~dd~f~~~l~~~~~ 568 (716)
+.++ + |+++|||||||+||++|||+|.|++.+++|+|.|+| +|+|+ +|+|||+++| |+|+++|+++++
T Consensus 266 ~~aa~~l~~~~~~~~v~lElGGkn~~IV~~dAdl~~Aa~~i~~~~f~~aGQ~C~a~-~rv~V~~~i~-d~f~~~l~~~~~ 343 (522)
T cd07123 266 KQIGENLDRYRTYPRIVGETGGKNFHLVHPSADVDSLVTATVRGAFEYQGQKCSAA-SRAYVPESLW-PEVKERLLEELK 343 (522)
T ss_pred HHHHhhcccccccCCEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCCCC-cEEEEcHHHH-HHHHHHHHHHHh
Confidence 8773 4 899999999999999999999999999999999987 99999 9999999999 799999999988
Q ss_pred hcCC-----------------------------------EEe-cCccc--cccc--c-C-----CCCccccccccCceEE
Q 005047 569 HEGV-----------------------------------GLF-GGPRA--SKLL--Q-I-----PETRLFHHEYNSMVCT 602 (716)
Q Consensus 569 ~~~~-----------------------------------~~~-g~~~~--~~~~--p-v-----~~~~~~~eE~FGPVl~ 602 (716)
++.+ +++ |+... .++| | | ++|++++||+||||++
T Consensus 344 ~l~~G~p~d~~t~~Gpli~~~~~~~v~~~v~~a~~~~Ga~vl~gg~~~~~~g~f~~PTvl~~v~~~~~i~~eEiFGPVl~ 423 (522)
T cd07123 344 EIKMGDPDDFSNFMGAVIDEKAFDRIKGYIDHAKSDPEAEIIAGGKCDDSVGYFVEPTVIETTDPKHKLMTEEIFGPVLT 423 (522)
T ss_pred hCccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEeCCCcCCCCCceEcCEEEeCCCCCChhhhcCCCCCeEE
Confidence 7521 121 33221 2333 6 2 4689999999999999
Q ss_pred EEEeC--CHHHHHHHHHhcC-CCceeEEEccCHHHHHHHHHcc--CcceEEEcCCcCC--CCCCcccCcceeeccccccc
Q 005047 603 VEIVD--DVRAAIDHIHQHG-SAHTDCIVAEDQKVAETFLCQV--DSAAVFHNASTRF--CDGARFGLGAEVGISTSRIH 675 (716)
Q Consensus 603 v~~~~--~~deAi~~aN~~~-~GL~a~i~t~d~~~a~~~~~~~--~~G~v~vN~~~~~--~~~~p~g~g~~sG~~~~~~~ 675 (716)
|++|+ |+||||+++|++. |||++||||+|.+++.++++++ ++|.||||+.... .+..||||.+.||+++ +
T Consensus 424 V~~~~~~~~~eai~~aN~~~~~gL~a~Vft~d~~~~~~~~~~l~~~~G~v~iN~~~~~~~~~~~PfGG~k~SG~gg---~ 500 (522)
T cd07123 424 VYVYPDSDFEETLELVDTTSPYALTGAIFAQDRKAIREATDALRNAAGNFYINDKPTGAVVGQQPFGGARASGTND---K 500 (522)
T ss_pred EEEeCCCCHHHHHHHHhCCCCcCceEEEEeCCHHHHHHHHHhhhhcCcEEEECCCCCCCCCCCCCCCcchhcCCCc---c
Confidence 99998 4799999999995 9999999999999999999996 5999999986543 2468999999999852 3
Q ss_pred cccccchhcccEEEEEEEc
Q 005047 676 ARGPVGVEGLLTTRWILRG 694 (716)
Q Consensus 676 ~~g~~gl~~ft~~k~v~~~ 694 (716)
++|++++++|++.|++...
T Consensus 501 ~~g~~~l~~~~~~k~~~~~ 519 (522)
T cd07123 501 AGSPLNLLRWVSPRTIKET 519 (522)
T ss_pred cCCHHHHHHhcceEEEEEe
Confidence 5689999999999998764
No 66
>cd07083 ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like. ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH.
Probab=100.00 E-value=1.4e-71 Score=629.52 Aligned_cols=399 Identities=16% Similarity=0.186 Sum_probs=335.6
Q ss_pred HHHHh-cCCcceeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Q 005047 267 IIKVL-EGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQ 345 (716)
Q Consensus 267 l~~~~-tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~ 345 (716)
..+|. +|+.++++..++ .+|+++++++|++||+.|+++|.++|.++|++++++|++++++|++++.+|.+++.
T Consensus 36 ~~~P~~tg~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~ 109 (500)
T cd07083 36 SVSPFAPSEVVGTTAKAD------KAEAEAALEAAWAAFKTWKDWPQEDRARLLLKAADLLRRRRRELIATLTYEVGKNW 109 (500)
T ss_pred eeCCCCCCcEEEEEcCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHhCCCH
Confidence 45676 588899998888 88999999999999999999999999999999999999999999999887765432
Q ss_pred HhchhHHHHHHhhcCHHHHHHHHHHHHHHhccccc-ccccccccccCCCeEEEEeecceeEEEEEcCC-Cch-hHHHHHH
Q 005047 346 EAGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIAS 422 (716)
Q Consensus 346 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~-~P~-~~~~~~~ 422 (716)
. ++ ..|+..+++.+++++..... .+...... ...+...+++++|+|||++|+|| ||. +.+++++
T Consensus 110 ~----~a--------~~ev~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~ 176 (500)
T cd07083 110 V----EA--------IDDVAEAIDFIRYYARAALRLRYPAVEVV-PYPGEDNESFYVGLGAGVVISPWNFPVAIFTGMIV 176 (500)
T ss_pred H----HH--------HHHHHHHHHHHHHHHHHHHHhcCcccccC-CCCCceEEEEEeccceEEEEcCCccHHHHHHHHHH
Confidence 1 21 23555666666665543321 12111000 01234567789999999999998 695 5679999
Q ss_pred HHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CchHHHhhcCCCCccEEEeecCHHHHHHHHHh
Q 005047 423 LAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKES 500 (716)
Q Consensus 423 ~ALaaGNtvv~Kps~~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~ 500 (716)
+||++||+||+|||+.||+|+.++++++.+ + +|+|++|+|+| +.++++.|..||+||+|+||||+.+|+.|++.
T Consensus 177 ~ALaaGN~VVlKPs~~tp~~~~~l~~~~~e----aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~v~~~ 252 (500)
T cd07083 177 APVAVGNTVIAKPAEDAVVVGYKVFEIFHE----AGFPPGVVQFLPGVGEEVGAYLTEHERIRGINFTGSLETGKKIYEA 252 (500)
T ss_pred HHHHcCCeEEEeCCCcchHHHHHHHHHHHH----cCCCCCceEEEeCCCchhHHHHhcCCCcCEEEEECcHHHHHHHHHH
Confidence 999999999999999999999999999986 8 99999999996 67788889899999999999999999999887
Q ss_pred cC---------CCEEEecCCcceEEEcCCCCHHHHHHHHHHhcCCCCC-ccccccceEEEeCccCChhhHHHHHHHHHhc
Q 005047 501 TK---------IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMVETLLVHKDLACNGALNELVVELQHE 570 (716)
Q Consensus 501 a~---------~~~~lElGGk~p~iV~~dADl~~Aa~~iv~~~f~n~g-~C~a~~~rv~V~~~i~dd~f~~~l~~~~~~~ 570 (716)
+. +|+++|||||||+||++|||+|.|++.+++++|.|+| .|+|+ +|+|||+++| |+|+++|+++++++
T Consensus 253 aa~~~~~~~~~~~v~lElgG~~~~iV~~dadl~~aa~~i~~~~f~~~GQ~C~a~-~rv~V~~~i~-d~f~~~l~~~~~~~ 330 (500)
T cd07083 253 AARLAPGQTWFKRLYVETGGKNAIIVDETADFELVVEGVVVSAFGFQGQKCSAA-SRLILTQGAY-EPVLERLLKRAERL 330 (500)
T ss_pred HhhccccccccCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhhcCCCCCCC-eeEEEcHHHH-HHHHHHHHHHHHcC
Confidence 62 8999999999999999999999999999999999976 99999 9999999999 79999999998875
Q ss_pred CC---------------------------------E-EecCccc--cc-cc-c-C-----CCCccccccccCceEEEEEe
Q 005047 571 GV---------------------------------G-LFGGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIV 606 (716)
Q Consensus 571 ~~---------------------------------~-~~g~~~~--~~-~~-p-v-----~~~~~~~eE~FGPVl~v~~~ 606 (716)
.+ + +.|+... .+ |+ | | ++|++++||+||||++|++|
T Consensus 331 ~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~g~vl~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~ 410 (500)
T cd07083 331 SVGPPEENGTDLGPVIDAEQEAKVLSYIEHGKNEGQLVLGGKRLEGEGYFVAPTVVEEVPPKARIAQEEIFGPVLSVIRY 410 (500)
T ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCEEEeCCCcCCCCCeEEccEEEeCCCCCChHhhCCCCCceEEEEEe
Confidence 32 1 1233221 13 33 5 2 36899999999999999999
Q ss_pred C--CHHHHHHHHHhcCCCceeEEEccCHHHHHHHHHccCcceEEEcCCcCCC--CCCcccCcceeeccccccccccccch
Q 005047 607 D--DVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFC--DGARFGLGAEVGISTSRIHARGPVGV 682 (716)
Q Consensus 607 ~--~~deAi~~aN~~~~GL~a~i~t~d~~~a~~~~~~~~~G~v~vN~~~~~~--~~~p~g~g~~sG~~~~~~~~~g~~gl 682 (716)
+ |+||||+++|+++|||++||||+|.+++.++++++++|+|+||++.... +.+||||.+.||+|. +++|++|+
T Consensus 411 ~d~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~PfGG~k~SG~G~---~~~g~~~l 487 (500)
T cd07083 411 KDDDFAEALEVANSTPYGLTGGVYSRKREHLEEARREFHVGNLYINRKITGALVGVQPFGGFKLSGTNA---KTGGPHYL 487 (500)
T ss_pred CCCCHHHHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCeeEEEECCCCCCCCCCCCCCCccccccCCC---cccCHHHH
Confidence 9 9999999999999999999999999999999999999999999875443 457999999999862 24689999
Q ss_pred hcccEEEEEEE
Q 005047 683 EGLLTTRWILR 693 (716)
Q Consensus 683 ~~ft~~k~v~~ 693 (716)
++||+.|++..
T Consensus 488 ~~~~~~k~~~~ 498 (500)
T cd07083 488 RRFLEMKAVAE 498 (500)
T ss_pred HHhhheeEEEE
Confidence 99999999875
No 67
>cd07108 ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like. NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD.
Probab=100.00 E-value=8e-72 Score=626.80 Aligned_cols=395 Identities=21% Similarity=0.227 Sum_probs=335.6
Q ss_pred HHHhcCCcceeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHh
Q 005047 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 347 (716)
Q Consensus 268 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~ 347 (716)
.+|.||+.++++..++ .+|+++++++|++||+.|+++|.++|.++|++++++|++++++|++++.+|++++..
T Consensus 2 ~~P~t~~~~~~~~~~~------~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~- 74 (457)
T cd07108 2 INPATGQVIGEVPRSR------AADVDRAVAAAKAAFPEWAATPARERGKLLARIADALEARSEELARLLALETGNALR- 74 (457)
T ss_pred cCCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCcH-
Confidence 3578899999998888 889999999999999999999999999999999999999999999999887765420
Q ss_pred chhHHHHHHhhcCHHHHHHHHHHHHHHhcccc-cccccccccccCCCeEEEEeecceeEEEEEcCC-Cch-hHHHHHHHH
Q 005047 348 GYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 424 (716)
Q Consensus 348 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~-~P~-~~~~~~~~A 424 (716)
.++ ..|+..+++.+++++.+.. ..+...+. ..+...+..++|+|||++|+|| ||. +.++++++|
T Consensus 75 --~~a--------~~ev~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~A 141 (457)
T cd07108 75 --TQA--------RPEAAVLADLFRYFGGLAGELKGETLPF---GPDVLTYTVREPLGVVGAILPWNAPLMLAALKIAPA 141 (457)
T ss_pred --HHH--------HHHHHHHHHHHHHHHHHHHHhCCceecc---CCCeeEEEEeecceEEEEECCCchHHHHHHHHHHHH
Confidence 111 2356666676776665432 12222221 1234567889999999999998 685 567999999
Q ss_pred HHhCCEEEEeCCcchHHHHHHHHHHHHHhcccccCcCceEEecC-CchHHHhhcCCCCccEEEeecCHHHHHHHHHhcC-
Q 005047 425 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDTVGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK- 502 (716)
Q Consensus 425 LaaGNtvv~Kps~~tp~t~~~l~~l~~~al~~alP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a~- 502 (716)
|++||+||+|||+.||.++.++++++.+ ++|+|++|+|+| +.++++.|..||++|+|+||||+.+|+.|++.+.
T Consensus 142 LaaGN~VVlKps~~~p~~~~~l~~~~~~----~lP~~~~~~v~g~~~~~~~~L~~~~~vd~v~ftGs~~~g~~v~~~aa~ 217 (457)
T cd07108 142 LVAGNTVVLKAAEDAPLAVLLLAEILAQ----VLPAGVLNVITGYGEECGAALVDHPDVDKVTFTGSTEVGKIIYRAAAD 217 (457)
T ss_pred HHcCCEEEEECCCCCcHHHHHHHHHHHH----hCCcCcEEEEeCCchHHHHHHhcCCCcCEEEEECcHHHHHHHHHHHhc
Confidence 9999999999999999999999999985 499999999996 5668888889999999999999999999998873
Q ss_pred --CCEEEecCCcceEEEcCCCCHHHHHHHHHHhc-CCCCC-ccccccceEEEeCccCChhhHHHHHHHHHhcCC------
Q 005047 503 --IPVLGHADGICHVYVDKSANLDVAKNIVIDAK-IDYPA-ACNAMVETLLVHKDLACNGALNELVVELQHEGV------ 572 (716)
Q Consensus 503 --~~~~lElGGk~p~iV~~dADl~~Aa~~iv~~~-f~n~g-~C~a~~~rv~V~~~i~dd~f~~~l~~~~~~~~~------ 572 (716)
+|+++|||||||+||++|||++.|++.+++|+ |.|+| +|+|+ +|+|||++|| |+|+++|+++++++.+
T Consensus 218 ~l~~~~lelgG~~~~iV~~dAdl~~Aa~~iv~~~~f~~~GQ~C~a~-~rv~V~~~i~-~~f~~~l~~~~~~~~vg~p~~~ 295 (457)
T cd07108 218 RLIPVSLELGGKSPMIVFPDADLDDAVDGAIAGMRFTRQGQSCTAG-SRLFVHEDIY-DAFLEKLVAKLSKLKIGDPLDE 295 (457)
T ss_pred cCCeEEEECCCCCeeEECCCCCHHHHHHHHHHhhHhhcCCCCCCCC-eEEEEehHHH-HHHHHHHHHHHhhCCCCCCCCC
Confidence 89999999999999999999999999999995 99876 99999 9999999999 7999999999876521
Q ss_pred -----------------------------EE-ecCccc------cccc--c-C-----CCCccccccccCceEEEEEeCC
Q 005047 573 -----------------------------GL-FGGPRA------SKLL--Q-I-----PETRLFHHEYNSMVCTVEIVDD 608 (716)
Q Consensus 573 -----------------------------~~-~g~~~~------~~~~--p-v-----~~~~~~~eE~FGPVl~v~~~~~ 608 (716)
++ .||... .++| | | +++++++||+||||++|++|+|
T Consensus 296 ~~~~gpli~~~~~~~~~~~i~~a~~~~ga~vl~gG~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~ 375 (457)
T cd07108 296 ATDIGAIISEKQFAKVCGYIDLGLSTSGATVLRGGPLPGEGPLADGFFVQPTIFSGVDNEWRLAREEIFGPVLCAIPWKD 375 (457)
T ss_pred CCCcCCCCCHHHHHHHHHHHHHHHhCCCCEEEeCCCcCccCCCCCceEECCEEEecCCCCChhhhcCCCCceEEeecCCC
Confidence 12 233221 1223 5 2 3689999999999999999999
Q ss_pred HHHHHHHHHhcCCCceeEEEccCHHHHHHHHHccCcceEEEcCCcCCCCCCcccCcceeeccccccccccccc-hhcccE
Q 005047 609 VRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVG-VEGLLT 687 (716)
Q Consensus 609 ~deAi~~aN~~~~GL~a~i~t~d~~~a~~~~~~~~~G~v~vN~~~~~~~~~p~g~g~~sG~~~~~~~~~g~~g-l~~ft~ 687 (716)
+||||+++|+++|||++||||+|.+++++|++++++|.|+||++....+..||||.+.||+| +++|.++ +++||+
T Consensus 376 ~~eai~~~n~~~~gLs~~vft~d~~~a~~~~~~l~~g~v~iN~~~~~~~~~pfGG~k~SG~G----~~~g~~~~~~~f~~ 451 (457)
T cd07108 376 EDEVIAMANDSHYGLAAYVWTRDLGRALRAAHALEAGWVQVNQGGGQQPGQSYGGFKQSGLG----REASLEGMLEHFTQ 451 (457)
T ss_pred HHHHHHHHhCCCcCceeEEEcCCHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCcccCcCC----CCccchhHHHHhhc
Confidence 99999999999999999999999999999999999999999998766677899999999986 2457766 799999
Q ss_pred EEEEE
Q 005047 688 TRWIL 692 (716)
Q Consensus 688 ~k~v~ 692 (716)
.|+|+
T Consensus 452 ~k~i~ 456 (457)
T cd07108 452 KKTVN 456 (457)
T ss_pred eEEEe
Confidence 99985
No 68
>PRK09847 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional
Probab=100.00 E-value=6e-72 Score=630.40 Aligned_cols=397 Identities=18% Similarity=0.181 Sum_probs=338.7
Q ss_pred HHHhcCCcceeEEecCCccccchhhHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Q 005047 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSR--RLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQ 345 (716)
Q Consensus 268 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~ 345 (716)
.+|.+|+.++++..++ .+|+++++++|++||+ .|+++|.++|.++|++++++|++|+++|++++++|.|++.
T Consensus 40 ~nP~tg~~i~~v~~~~------~~dv~~av~aA~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~ 113 (494)
T PRK09847 40 VDPVTQAPLAKIARGK------SVDIDRAVSAARGVFERGDWSLSSPAKRKAVLNKLADLMEAHAEELALLETLDTGKPI 113 (494)
T ss_pred ECCCCCCEEEEEeCCC------HHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH
Confidence 5788999999998888 8999999999999997 5999999999999999999999999999998887765432
Q ss_pred HhchhHHHHHHhhcCHHHHHHHHHHHHHHhccccc-ccccccccccCCCeEEEEeecceeEEEEEcCC-Cch-hHHHHHH
Q 005047 346 EAGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIAS 422 (716)
Q Consensus 346 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~-~P~-~~~~~~~ 422 (716)
. ++. ..|+..+++.+++++...+. .++..+. ..+...+++++|+|||++|+|| ||. +++++++
T Consensus 114 ~----~~~-------~~ev~~~~~~l~~~a~~~~~~~g~~~~~---~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~ 179 (494)
T PRK09847 114 R----HSL-------RDDIPGAARAIRWYAEAIDKVYGEVATT---SSHELAMIVREPVGVIAAIVPWNFPLLLTCWKLG 179 (494)
T ss_pred H----HHH-------HHHHHHHHHHHHHHHHHHHHhcCccccC---CCCceeEEEecceeEEEEECCCccHHHHHHHHHH
Confidence 1 111 12566667777776654332 2332221 1233457889999999999998 696 5789999
Q ss_pred HHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CchHHHhhcCCCCccEEEeecCHHHHHHHHHh
Q 005047 423 LAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKES 500 (716)
Q Consensus 423 ~ALaaGNtvv~Kps~~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~ 500 (716)
|||++||+||+|||+.||.++..+++++.+ + +|+|++|+|+| +.+++..|..||++|+|+||||+.+|+.|++.
T Consensus 180 ~ALaaGN~VvlKps~~~p~~~~~l~~~~~~----aGlP~g~v~~v~g~~~~~~~~L~~~~~vd~v~fTGs~~~g~~v~~~ 255 (494)
T PRK09847 180 PALAAGNSVILKPSEKSPLSAIRLAGLAKE----AGLPDGVLNVVTGFGHEAGQALSRHNDIDAIAFTGSTRTGKQLLKD 255 (494)
T ss_pred HHHHcCCEEEEeCCCCChHHHHHHHHHHHH----cCcCcCcEEEEeCCChhHHHHHhcCCCCCEEEEECCHHHHHHHHHH
Confidence 999999999999999999999999999986 7 99999999996 56677888889999999999999999999886
Q ss_pred c----CCCEEEecCCcceEEEcCCC-CHHHHHHHHHHhcCCCCC-ccccccceEEEeCccCChhhHHHHHHHHHhcCC--
Q 005047 501 T----KIPVLGHADGICHVYVDKSA-NLDVAKNIVIDAKIDYPA-ACNAMVETLLVHKDLACNGALNELVVELQHEGV-- 572 (716)
Q Consensus 501 a----~~~~~lElGGk~p~iV~~dA-Dl~~Aa~~iv~~~f~n~g-~C~a~~~rv~V~~~i~dd~f~~~l~~~~~~~~~-- 572 (716)
+ .+|++||||||||+||++|+ |+|.|++.+++++|.|+| .|+|+ +|+|||+++| |+|+++|+++++++.+
T Consensus 256 aa~~~~~~~~lElGGk~~~iV~~daaDl~~Aa~~i~~~~~~~aGQ~C~a~-~rv~V~~~i~-d~f~~~l~~~~~~~~~g~ 333 (494)
T PRK09847 256 AGDSNMKRVWLEAGGKSANIVFADCPDLQQAASATAAGIFYNQGQVCIAG-TRLLLEESIA-DEFLALLKQQAQNWQPGH 333 (494)
T ss_pred hhhhCCCeEEEecCCCCeeEEcCCccCHHHHHHHHHHHHHhcCCCCCCCC-cEEEEcHHHH-HHHHHHHHHHHHhcCCCC
Confidence 5 38999999999999999997 999999999999999987 99999 9999999999 7999999999987621
Q ss_pred -------------------------------EE-ecCccc--cccc-c-C-----CCCccccccccCceEEEEEeCCHHH
Q 005047 573 -------------------------------GL-FGGPRA--SKLL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRA 611 (716)
Q Consensus 573 -------------------------------~~-~g~~~~--~~~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~de 611 (716)
++ .|+... ..++ | | +++++++||+||||++|++|+|+||
T Consensus 334 p~~~~~~~gpli~~~~~~~v~~~v~~a~~~G~i~~gg~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~e 413 (494)
T PRK09847 334 PLDPATTMGTLIDCAHADSVHSFIREGESKGQLLLDGRNAGLAAAIGPTIFVDVDPNASLSREEIFGPVLVVTRFTSEEQ 413 (494)
T ss_pred CCCCCCcCCCCcCHHHHHHHHHHHHHHHHCCeEEECCccCCCCceEeeEEEeCCCCCChHHhCcCcCceEEEEecCCHHH
Confidence 11 233221 1233 5 2 3588999999999999999999999
Q ss_pred HHHHHHhcCCCceeEEEccCHHHHHHHHHccCcceEEEcCCcCCCCCCcccCcceeeccccccccccccchhcccEEEEE
Q 005047 612 AIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWI 691 (716)
Q Consensus 612 Ai~~aN~~~~GL~a~i~t~d~~~a~~~~~~~~~G~v~vN~~~~~~~~~p~g~g~~sG~~~~~~~~~g~~gl~~ft~~k~v 691 (716)
||+++|+++|||++||||+|.+++.++++++++|+|+||+.+......||||.+.||+| +++|++|+++||+.|+|
T Consensus 414 ai~~~n~~~~gLsa~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G----~~~g~~~l~~ft~~k~v 489 (494)
T PRK09847 414 ALQLANDSQYGLGAAVWTRDLSRAHRMSRRLKAGSVFVNNYNDGDMTVPFGGYKQSGNG----RDKSLHALEKFTELKTI 489 (494)
T ss_pred HHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCCcccccC----ccchHHHHHHhhceEEE
Confidence 99999999999999999999999999999999999999997766667899999999986 35799999999999999
Q ss_pred EEc
Q 005047 692 LRG 694 (716)
Q Consensus 692 ~~~ 694 (716)
++.
T Consensus 490 ~~~ 492 (494)
T PRK09847 490 WIS 492 (494)
T ss_pred EEe
Confidence 764
No 69
>cd07138 ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric acid dehydrogenase-like. The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD.
Probab=100.00 E-value=9.4e-72 Score=627.34 Aligned_cols=391 Identities=19% Similarity=0.190 Sum_probs=331.4
Q ss_pred HHHhcCCcceeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHh
Q 005047 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 347 (716)
Q Consensus 268 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~ 347 (716)
.+|.+|+.++++..++ .+++++++++|++||+.|+++|.++|.++|++++++|++|+++|++++.+|++++..
T Consensus 19 ~~P~~~~~~~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~- 91 (466)
T cd07138 19 INPATEEVIGTVPLGT------AADVDRAVAAARRAFPAWSATSVEERAALLERIAEAYEARADELAQAITLEMGAPIT- 91 (466)
T ss_pred ECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH-
Confidence 5678899999998888 889999999999999999999999999999999999999999999998877654321
Q ss_pred chhHHHHHHhhcCHHHHHHHHHHHHHHhcccccccccccccccCCCeEEEEeecceeEEEEEcCC-Cch-hHHHHHHHHH
Q 005047 348 GYAKSLVSRLALKPGKISSLAKSIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAI 425 (716)
Q Consensus 348 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~-~P~-~~~~~~~~AL 425 (716)
++.. .++...++.+++++...+...... . ....+++++|+|||++|+|| ||. ++++++++||
T Consensus 92 ---~~~~-------~ev~~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~AL 155 (466)
T cd07138 92 ---LARA-------AQVGLGIGHLRAAADALKDFEFEE-----R-RGNSLVVREPIGVCGLITPWNWPLNQIVLKVAPAL 155 (466)
T ss_pred ---HHHH-------HHHHHHHHHHHHHHHhhhhccccc-----c-CceEEEEEeecceEEEECCCccHHHHHHHHHHHHH
Confidence 1111 134445555555543322111100 0 12356789999999999998 795 6789999999
Q ss_pred HhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CchHHHhhcCCCCccEEEeecCHHHHHHHHHhcC-
Q 005047 426 RSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK- 502 (716)
Q Consensus 426 aaGNtvv~Kps~~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a~- 502 (716)
++||+||+|||+.||+|+.+|++++.+ + +|+|++|+|+| ++++++.|..||+|++|+||||+++|+.|++.+.
T Consensus 156 aaGN~Vv~Kps~~~p~~~~~l~~~~~~----aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~ 231 (466)
T cd07138 156 AAGCTVVLKPSEVAPLSAIILAEILDE----AGLPAGVFNLVNGDGPVVGEALSAHPDVDMVSFTGSTRAGKRVAEAAAD 231 (466)
T ss_pred hcCCEEEEECCCcCcHHHHHHHHHHHH----cCCCCCcEEEEeCCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhc
Confidence 999999999999999999999999986 8 99999999996 5668888999999999999999999999998873
Q ss_pred --CCEEEecCCcceEEEcCCCCHHHHHHHHHHhcCCCCC-ccccccceEEEeCccCChhhHHHHHHHHHhcC--------
Q 005047 503 --IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMVETLLVHKDLACNGALNELVVELQHEG-------- 571 (716)
Q Consensus 503 --~~~~lElGGk~p~iV~~dADl~~Aa~~iv~~~f~n~g-~C~a~~~rv~V~~~i~dd~f~~~l~~~~~~~~-------- 571 (716)
+|+++|||||||+||++|||+|.|++.+++|+|.|+| .|+++ +|+|||+++| |+|+++|+++++++.
T Consensus 232 ~~~~v~lElgG~~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~-~rv~V~~~i~-d~f~~~l~~~~~~~~~g~p~~~~ 309 (466)
T cd07138 232 TVKRVALELGGKSANIILDDADLEKAVPRGVAACFANSGQSCNAP-TRMLVPRSRY-AEAEEIAAAAAEAYVVGDPRDPA 309 (466)
T ss_pred cCCeEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCcCC-cEEEEeHhHH-HHHHHHHHHHHHhcCCCCCCCCC
Confidence 8999999999999999999999999999999999976 99999 9999999999 799999999887652
Q ss_pred --------------------------CEE-ecCcc-c----ccc-c-c-C-----CCCccccccccCceEEEEEeCCHHH
Q 005047 572 --------------------------VGL-FGGPR-A----SKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRA 611 (716)
Q Consensus 572 --------------------------~~~-~g~~~-~----~~~-~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~de 611 (716)
+++ .|+.. . .++ + | | +++++++||+||||++|++|+|+||
T Consensus 310 ~~~gpli~~~~~~~~~~~v~~a~~~Ga~~l~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~fgPvl~v~~~~~~~e 389 (466)
T cd07138 310 TTLGPLASAAQFDRVQGYIQKGIEEGARLVAGGPGRPEGLERGYFVKPTVFADVTPDMTIAREEIFGPVLSIIPYDDEDE 389 (466)
T ss_pred CcCCccCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCcCCCCceECCEEecCCCCCChHHhCCCCCceEEEeccCCHHH
Confidence 122 23321 1 133 3 5 2 3588999999999999999999999
Q ss_pred HHHHHHhcCCCceeEEEccCHHHHHHHHHccCcceEEEcCCcCCCCCCcccCcceeeccccccccccccchhcccEEEEE
Q 005047 612 AIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWI 691 (716)
Q Consensus 612 Ai~~aN~~~~GL~a~i~t~d~~~a~~~~~~~~~G~v~vN~~~~~~~~~p~g~g~~sG~~~~~~~~~g~~gl~~ft~~k~v 691 (716)
||+++|+++|||++||||+|.++++++++++++|+|+||+.. ..+.+||||.+.||+| +++|++|+++||+.|+|
T Consensus 390 ai~~~n~~~~gL~a~i~t~d~~~a~~~~~~l~~G~v~iN~~~-~~~~~PfgG~k~SG~G----~~~g~~~~~~~~~~k~v 464 (466)
T cd07138 390 AIAIANDTPYGLAGYVWSADPERARAVARRLRAGQVHINGAA-FNPGAPFGGYKQSGNG----REWGRYGLEEFLEVKSI 464 (466)
T ss_pred HHHHHhCCCCCceEEEEcCCHHHHHHHHHhcCcceEEECCCC-CCCCCCcCCcccccCC----ccchHHHHHHhcceeEE
Confidence 999999999999999999999999999999999999999863 4567899999999876 35699999999999987
Q ss_pred E
Q 005047 692 L 692 (716)
Q Consensus 692 ~ 692 (716)
+
T Consensus 465 ~ 465 (466)
T cd07138 465 Q 465 (466)
T ss_pred e
Confidence 4
No 70
>cd07125 ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA. The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes.
Probab=100.00 E-value=1.5e-71 Score=631.26 Aligned_cols=424 Identities=19% Similarity=0.187 Sum_probs=349.2
Q ss_pred HHHHHHHHHcCCc--EEEeeCCCc-----chHHHHhc-CCcceeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHH
Q 005047 243 VNAAYCAACAGIP--VVITSGFAM-----DSIIKVLE-GKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQD 314 (716)
Q Consensus 243 l~aa~~a~~~gi~--v~I~~g~~~-----~~l~~~~t-g~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~ 314 (716)
++.+++..+.+.+ +.+++|... -.+.+|.+ |+.++++...+ .+|+++++++|++||+.|+.++.++
T Consensus 19 ~~~~~~~~~~~~~~~~p~i~g~~~~~~~~~~v~~P~t~g~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~ 92 (518)
T cd07125 19 LADALKAFDEKEWEAIPIINGEETETGEGAPVIDPADHERTIGEVSLAD------AEDVDAALAIAAAAFAGWSATPVEE 92 (518)
T ss_pred HHHHHHHhhhcCcccCceECCEEeeCCCeEEEECCCCCCceEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHH
Confidence 4455555555532 555555431 23478899 99999999988 8999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhchhHHHHHHhhcCHHHHHHHHHHHHHHhccccc-cccc-ccccccCC
Q 005047 315 RRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQI-LKRTELAD 392 (716)
Q Consensus 315 R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~-~~~~~~~~ 392 (716)
|.++|++++++|++++++|++++++|++++.. ++. .++..+++.+++++...+. .+.. .+. +.
T Consensus 93 R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~----~a~--------~ev~~~i~~l~~~~~~~~~~~~~~~~~~---~~ 157 (518)
T cd07125 93 RAEILEKAADLLEANRGELIALAAAEAGKTLA----DAD--------AEVREAIDFCRYYAAQARELFSDPELPG---PT 157 (518)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH----HHH--------HHHHHHHHHHHHHHHHHHHhcCCccccC---CC
Confidence 99999999999999999999999887765432 221 2444555555555432211 1111 111 12
Q ss_pred CeEEEEeecceeEEEEEcCC-Cch-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-
Q 005047 393 GLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS- 468 (716)
Q Consensus 393 ~~~~~~~~~PlGVv~~I~p~-~P~-~~~~~~~~ALaaGNtvv~Kps~~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~- 468 (716)
+...+.+++|+|||++|+|| ||. +.++++++||++||+||+|||+.||+++.++++++.+ + +|+|++|+|+|
T Consensus 158 g~~~~~~~~P~GVV~~I~p~N~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~ll~e----aGlP~gvv~vv~g~ 233 (518)
T cd07125 158 GELNGLELHGRGVFVCISPWNFPLAIFTGQIAAALAAGNTVIAKPAEQTPLIAARAVELLHE----AGVPRDVLQLVPGD 233 (518)
T ss_pred CceeEEEEecccEEEEECCcchHHHHHHHHHHHHHHcCCEEEEeCCCcCcHHHHHHHHHHHH----cCCCCCcEEEEecC
Confidence 34567889999999999998 796 5689999999999999999999999999999999986 8 99999999996
Q ss_pred CchHHHhhcCCCCccEEEeecCHHHHHHHHHhc------CCCEEEecCCcceEEEcCCCCHHHHHHHHHHhcCCCCC-cc
Q 005047 469 REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST------KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-AC 541 (716)
Q Consensus 469 ~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a------~~~~~lElGGk~p~iV~~dADl~~Aa~~iv~~~f~n~g-~C 541 (716)
++++++.|..||+||+|+||||+++|+.|++.+ .+|+++|||||||+||++|||+|+|++.+++|+|.|+| +|
T Consensus 234 ~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~~~v~lElgGk~p~iV~~dADl~~Aa~~iv~g~f~nsGQ~C 313 (518)
T cd07125 234 GEEIGEALVAHPRIDGVIFTGSTETAKLINRALAERDGPILPLIAETGGKNAMIVDSTALPEQAVKDVVQSAFGSAGQRC 313 (518)
T ss_pred chhhHHHHhcCCCcCEEEEECCHHHHHHHHHHhhhccCCCceEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCC
Confidence 455788888999999999999999999998865 37999999999999999999999999999999999987 99
Q ss_pred ccccceEEEeCccCChhhHHHHHHHHHhcCCE---------------------------------E-ecCccc--ccc-c
Q 005047 542 NAMVETLLVHKDLACNGALNELVVELQHEGVG---------------------------------L-FGGPRA--SKL-L 584 (716)
Q Consensus 542 ~a~~~rv~V~~~i~dd~f~~~l~~~~~~~~~~---------------------------------~-~g~~~~--~~~-~ 584 (716)
+|+ +|+|||+++| |+|+++|+++++++++. + .|+... .++ +
T Consensus 314 ~a~-~rv~V~~~i~-d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~~~vl~gg~~~~~~g~~~ 391 (518)
T cd07125 314 SAL-RLLYLQEEIA-ERFIEMLKGAMASLKVGDPWDLSTDVGPLIDKPAGKLLRAHTELMRGEAWLIAPAPLDDGNGYFV 391 (518)
T ss_pred CCC-eEEEEcchhH-HHHHHHHHHHHhcCCccCCCCCCCCcCCCcCHHHHHHHHHHHHHHHhCCEEEeCCCcCCCCCeEE
Confidence 999 9999999999 79999999999876321 1 122211 122 3
Q ss_pred -c-C---CCCccccccccCceEEEEEeC--CHHHHHHHHHhcCCCceeEEEccCHHHHHHHHHccCcceEEEcCCcCCC-
Q 005047 585 -Q-I---PETRLFHHEYNSMVCTVEIVD--DVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFC- 656 (716)
Q Consensus 585 -p-v---~~~~~~~eE~FGPVl~v~~~~--~~deAi~~aN~~~~GL~a~i~t~d~~~a~~~~~~~~~G~v~vN~~~~~~- 656 (716)
| | .+|++++||+||||++|++|+ |+||||+++|+++|||++||||+|.+++++|++++++|.|+||+++...
T Consensus 392 ~Ptvl~~v~~~i~~eE~FgPVl~v~~~~~~~~deAi~~~n~~~~gLta~Vft~d~~~~~~~~~~l~~G~V~IN~~~~~~~ 471 (518)
T cd07125 392 APGIIEIVGIFDLTTEVFGPILHVIRFKAEDLDEAIEDINATGYGLTLGIHSRDEREIEYWRERVEAGNLYINRNITGAI 471 (518)
T ss_pred ccEEEeecCChHhhCcccCCeEEEEEeCCCCHHHHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCcCeEEECCCCCCCC
Confidence 5 2 278999999999999999999 9999999999999999999999999999999999999999999876532
Q ss_pred -CCCcccCcceeeccccccccccccchhcccEEEEEEEcCc
Q 005047 657 -DGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNG 696 (716)
Q Consensus 657 -~~~p~g~g~~sG~~~~~~~~~g~~gl~~ft~~k~v~~~~~ 696 (716)
+..||||.+.||+|. +++|++|+++||+.|+|+++..
T Consensus 472 ~~~~PfGG~~~SG~G~---~~gg~~~~~~ft~~k~i~~~~~ 509 (518)
T cd07125 472 VGRQPFGGWGLSGTGP---KAGGPNYLLRFGNEKTVSLNTT 509 (518)
T ss_pred CCCCCCCCcccccCCc---ccccHHHHHHhcceEEEEEEcc
Confidence 468999999999862 2468999999999999988543
No 71
>cd07131 ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like. Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD.
Probab=100.00 E-value=1.4e-71 Score=628.22 Aligned_cols=398 Identities=18% Similarity=0.196 Sum_probs=335.4
Q ss_pred HHHhc-CCcceeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Q 005047 268 IKVLE-GKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 346 (716)
Q Consensus 268 ~~~~t-g~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~ 346 (716)
.+|.+ ++.++++..++ .+|+++++++|++||+.|++++.++|.++|++++++|++++++|++++.+|.+++.
T Consensus 19 ~~P~t~~~~~~~~~~~~------~~~v~~av~~a~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~ela~~~~~e~Gk~~- 91 (478)
T cd07131 19 RNPADLEEVVGTFPLST------ASDVDAAVEAAREAFPEWRKVPAPRRAEYLFRAAELLKKRKEELARLVTREMGKPL- 91 (478)
T ss_pred ECCCCCCeEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCH-
Confidence 46777 56789988888 88999999999999999999999999999999999999999999998876654432
Q ss_pred hchhHHHHHHhhcCHHHHHHHHHHHHHHhcccc-cccccccccccCCCeEEEEeecceeEEEEEcCC-Cch-hHHHHHHH
Q 005047 347 AGYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 423 (716)
Q Consensus 347 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~-~P~-~~~~~~~~ 423 (716)
.++ ..++...++.+++++...+ ..+...+.. ..+...+.+++|+|||++|+|| ||. +..+++++
T Consensus 92 ---~~~--------~~ev~~~i~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ 158 (478)
T cd07131 92 ---AEG--------RGDVQEAIDMAQYAAGEGRRLFGETVPSE--LPNKDAMTRRQPIGVVALITPWNFPVAIPSWKIFP 158 (478)
T ss_pred ---HHH--------HHHHHHHHHHHHHHHHHHHHhCCcccccC--CCCceEEEEeeceeEEEEECCcCcHHHHHHHHHHH
Confidence 121 1355566666666554322 122222211 1233567899999999999998 796 56789999
Q ss_pred HHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CchHHHhhcCCCCccEEEeecCHHHHHHHHHhc
Q 005047 424 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST 501 (716)
Q Consensus 424 ALaaGNtvv~Kps~~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a 501 (716)
||++||+||+|||+.||+++..+++++.+ + +|+|++|+|+| ++++++.|..||+||+|+||||+.+|+.|++.+
T Consensus 159 ALaaGN~VvlKps~~~p~~~~~l~~~l~~----aGlP~gvv~~v~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~~~a 234 (478)
T cd07131 159 ALVCGNTVVFKPAEDTPACALKLVELFAE----AGLPPGVVNVVHGRGEEVGEALVEHPDVDVVSFTGSTEVGERIGETC 234 (478)
T ss_pred HHHcCCEEEEECCCcCcHHHHHHHHHHHh----cCcCCCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHH
Confidence 99999999999999999999999999986 8 99999999996 555888888999999999999999999998877
Q ss_pred ---CCCEEEecCCcceEEEcCCCCHHHHHHHHHHhcCCCCC-ccccccceEEEeCccCChhhHHHHHHHHHhcCC-----
Q 005047 502 ---KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMVETLLVHKDLACNGALNELVVELQHEGV----- 572 (716)
Q Consensus 502 ---~~~~~lElGGk~p~iV~~dADl~~Aa~~iv~~~f~n~g-~C~a~~~rv~V~~~i~dd~f~~~l~~~~~~~~~----- 572 (716)
.+|+++|||||||+||++|||+|.|++.+++++|.|+| .|+|+ +|+|||+++| |+|+++|+++++++++
T Consensus 235 a~~~~~~~lelgG~~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~-~rv~V~~~i~-~~f~~~l~~~~~~~~~g~p~~ 312 (478)
T cd07131 235 ARPNKRVALEMGGKNPIIVMDDADLDLALEGALWSAFGTTGQRCTAT-SRLIVHESVY-DEFLKRFVERAKRLRVGDGLD 312 (478)
T ss_pred hhcCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCC-eEEEEehhhH-HHHHHHHHHHHHhcCCCCCCC
Confidence 38999999999999999999999999999999999987 99999 9999999999 7999999999887632
Q ss_pred -----------------------------EE-ecCccc------ccc-c-c-C-----CCCccccccccCceEEEEEeCC
Q 005047 573 -----------------------------GL-FGGPRA------SKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVDD 608 (716)
Q Consensus 573 -----------------------------~~-~g~~~~------~~~-~-p-v-----~~~~~~~eE~FGPVl~v~~~~~ 608 (716)
++ .|+... .++ + | | +++++++||+||||++|++|+|
T Consensus 313 ~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~ 392 (478)
T cd07131 313 EETDMGPLINEAQLEKVLNYNEIGKEEGATLLLGGERLTGGGYEKGYFVEPTVFTDVTPDMRIAQEEIFGPVVALIEVSS 392 (478)
T ss_pred CCCcCCcCCCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCceECCEEEeCCCCCChHhhCCCcCCeEEEEEeCC
Confidence 11 133221 122 3 5 2 3588999999999999999999
Q ss_pred HHHHHHHHHhcCCCceeEEEccCHHHHHHHHHccCcceEEEcCCcCC-CCCCcccCcceeeccccccccccccchhcccE
Q 005047 609 VRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRF-CDGARFGLGAEVGISTSRIHARGPVGVEGLLT 687 (716)
Q Consensus 609 ~deAi~~aN~~~~GL~a~i~t~d~~~a~~~~~~~~~G~v~vN~~~~~-~~~~p~g~g~~sG~~~~~~~~~g~~gl~~ft~ 687 (716)
+||||+++|+++|||++||||+|.+++++|++++++|+|+||+++.. .+.+||||.++||+|. +++|.+|+++||+
T Consensus 393 ~~eai~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~pfgG~k~SG~G~---~~~g~~~~~~f~~ 469 (478)
T cd07131 393 LEEAIEIANDTEYGLSSAIYTEDVNKAFRARRDLEAGITYVNAPTIGAEVHLPFGGVKKSGNGH---REAGTTALDAFTE 469 (478)
T ss_pred HHHHHHHHhCCCCcceEEEEcCCHHHHHHHHHhcCccEEEECCCCCCCCCCCCCCCcccccCCC---cCCcHHHHHHhhh
Confidence 99999999999999999999999999999999999999999987654 4678999999999862 2458999999999
Q ss_pred EEEEEEc
Q 005047 688 TRWILRG 694 (716)
Q Consensus 688 ~k~v~~~ 694 (716)
.|+|+++
T Consensus 470 ~k~i~~~ 476 (478)
T cd07131 470 WKAVYVD 476 (478)
T ss_pred eEEEEEe
Confidence 9999875
No 72
>PRK09457 astD succinylglutamic semialdehyde dehydrogenase; Reviewed
Probab=100.00 E-value=1.6e-71 Score=627.04 Aligned_cols=396 Identities=17% Similarity=0.126 Sum_probs=329.9
Q ss_pred HHHhcCCcceeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHh
Q 005047 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 347 (716)
Q Consensus 268 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~ 347 (716)
.+|.||+.++++..++ .+++++++++|++||+.|+++|.++|.++|++++++|++++++|++++.+|.+++..
T Consensus 20 ~~P~t~~~i~~~~~a~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~- 92 (487)
T PRK09457 20 RNPVSGEVLWQGNDAT------AAQVDAAVRAARAAFPAWARLSFEERQAIVERFAALLEENKEELAEVIARETGKPLW- 92 (487)
T ss_pred ECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhCCCHH-
Confidence 5678999999998888 889999999999999999999999999999999999999999999998877654321
Q ss_pred chhHHHHHHhhcCHHHHHHHHHHHHHHhccc-ccccccccccccCCCeEEEEeecceeEEEEEcCC-Cch-hHHHHHHHH
Q 005047 348 GYAKSLVSRLALKPGKISSLAKSIRILADME-EPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 424 (716)
Q Consensus 348 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~-~P~-~~~~~~~~A 424 (716)
++. .|+..+++.+++++... +..+..... ..+...+++|+|+|||++|+|| ||. +..+++++|
T Consensus 93 ---~a~--------~ev~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~A 158 (487)
T PRK09457 93 ---EAA--------TEVTAMINKIAISIQAYHERTGEKRSE---MADGAAVLRHRPHGVVAVFGPYNFPGHLPNGHIVPA 158 (487)
T ss_pred ---HHH--------HHHHHHHHHHHHHHHHHHHhcCceecc---CCCceeEEEEeccEEEEEECCCchHHHHHHHHHHHH
Confidence 221 24455555555433221 112222111 1233467889999999999998 695 568999999
Q ss_pred HHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecCCchHHHhhcCCCCccEEEeecCHHHHHHHHHhc--
Q 005047 425 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST-- 501 (716)
Q Consensus 425 LaaGNtvv~Kps~~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a-- 501 (716)
|++||+||+|||+.||+|+.++++++.+ + +|+|++|+|+|+.++++.|..||+||+|+||||+++|+.|++++
T Consensus 159 LaaGN~VvlKPs~~tp~t~~~l~~l~~~----aGlP~gvv~~v~g~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~ 234 (487)
T PRK09457 159 LLAGNTVVFKPSELTPWVAELTVKLWQQ----AGLPAGVLNLVQGGRETGKALAAHPDIDGLLFTGSANTGYLLHRQFAG 234 (487)
T ss_pred HHcCCEEEEECCCCCcHHHHHHHHHHHH----hCcCcCeEEEEeCCHHHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhh
Confidence 9999999999999999999999999986 7 99999999997656788888999999999999999999999864
Q ss_pred --CCCEEEecCCcceEEEcCCCCHHHHHHHHHHhcCCCCC-ccccccceEEEeCccC-ChhhHHHHHHHHHhcCC-----
Q 005047 502 --KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMVETLLVHKDLA-CNGALNELVVELQHEGV----- 572 (716)
Q Consensus 502 --~~~~~lElGGk~p~iV~~dADl~~Aa~~iv~~~f~n~g-~C~a~~~rv~V~~~i~-dd~f~~~l~~~~~~~~~----- 572 (716)
.++++||||||||+||++|||+|.|++.+++++|.|+| .|+++ +|+|||+++| | +|+++|+++++++++
T Consensus 235 ~~~~~~~lElGGk~p~IV~~dADl~~aa~~i~~~~f~~~GQ~C~a~-~rv~V~~~i~~d-~f~~~l~~~~~~~~vG~p~~ 312 (487)
T PRK09457 235 QPEKILALEMGGNNPLVIDEVADIDAAVHLIIQSAFISAGQRCTCA-RRLLVPQGAQGD-AFLARLVAVAKRLTVGRWDA 312 (487)
T ss_pred cCCCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHhhccCCCCCCC-ceEEEeccccHH-HHHHHHHHHHhcCcCCCCCc
Confidence 26789999999999999999999999999999999987 99999 9999999996 6 999999999877532
Q ss_pred ------------------------------EE-ecCccc--c-ccc-c-C----CCCccccccccCceEEEEEeCCHHHH
Q 005047 573 ------------------------------GL-FGGPRA--S-KLL-Q-I----PETRLFHHEYNSMVCTVEIVDDVRAA 612 (716)
Q Consensus 573 ------------------------------~~-~g~~~~--~-~~~-p-v----~~~~~~~eE~FGPVl~v~~~~~~deA 612 (716)
++ .|+... . .|+ | | ++|++++||+||||++|++|+|+|||
T Consensus 313 ~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~PTvl~v~~~~~i~~eE~FGPVl~V~~~~~~dea 392 (487)
T PRK09457 313 EPQPFMGAVISEQAAQGLVAAQAQLLALGGKSLLEMTQLQAGTGLLTPGIIDVTGVAELPDEEYFGPLLQVVRYDDFDEA 392 (487)
T ss_pred CCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCccCCCCeeEecEEeccCCCChHHhCCCcCCeEEEEEeCCHHHH
Confidence 11 122111 1 233 5 2 36899999999999999999999999
Q ss_pred HHHHHhcCCCceeEEEccCHHHHHHHHHccCcceEEEcCCcCC-CCCCcccCcceeeccccccccccccchhcccEEEEE
Q 005047 613 IDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRF-CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWI 691 (716)
Q Consensus 613 i~~aN~~~~GL~a~i~t~d~~~a~~~~~~~~~G~v~vN~~~~~-~~~~p~g~g~~sG~~~~~~~~~g~~gl~~ft~~k~v 691 (716)
|+++|+++|||++||||+|.++++++++++++|+|+||++... .+..||||.+.||+| +++|. ...+||+.|++
T Consensus 393 i~~~N~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G----~~~g~-~~~~~~~~k~~ 467 (487)
T PRK09457 393 IRLANNTRFGLSAGLLSDDREDYDQFLLEIRAGIVNWNKPLTGASSAAPFGGVGASGNH----RPSAY-YAADYCAYPMA 467 (487)
T ss_pred HHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEECCCCCCCCCCCCCCcccccCC----CCCch-hHhhheeeeEE
Confidence 9999999999999999999999999999999999999987543 356899999999986 34564 44669999999
Q ss_pred EEcC
Q 005047 692 LRGN 695 (716)
Q Consensus 692 ~~~~ 695 (716)
++..
T Consensus 468 ~~~~ 471 (487)
T PRK09457 468 SLES 471 (487)
T ss_pred EEec
Confidence 8864
No 73
>cd07088 ALDH_LactADH-AldA Escherichia coli lactaldehyde dehydrogenase AldA-like. Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD.
Probab=100.00 E-value=1.3e-71 Score=627.35 Aligned_cols=396 Identities=18% Similarity=0.222 Sum_probs=337.2
Q ss_pred HHHHhcCCcceeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Q 005047 267 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 346 (716)
Q Consensus 267 l~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~ 346 (716)
+.+|.+|+.++++..++ .+++++++++|++||+.|+++|.++|.++|++++++|+++.++|++++.+|.++...
T Consensus 17 ~~~P~t~~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~ 90 (468)
T cd07088 17 VLNPATGEVVATVPAAT------AEDADRAVDAAEAAQKAWERLPAIERAAYLRKLADLIRENADELAKLIVEEQGKTLS 90 (468)
T ss_pred eECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHH
Confidence 35678899999999888 889999999999999999999999999999999999999999999998876654321
Q ss_pred hchhHHHHHHhhcCHHHHHHHHHHHHHHhccccc-ccccccccccCCCeEEEEeecceeEEEEEcCC-Cch-hHHHHHHH
Q 005047 347 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 423 (716)
Q Consensus 347 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~-~P~-~~~~~~~~ 423 (716)
++ ..++..+++.+++++.+.+. .+...+.. ..+...+.+++|+|||++|+|| ||. +.++++++
T Consensus 91 ----~a--------~~ev~~~~~~l~~~~~~a~~~~~~~~~~~--~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ 156 (468)
T cd07088 91 ----LA--------RVEVEFTADYIDYMAEWARRIEGEIIPSD--RPNENIFIFKVPIGVVAGILPWNFPFFLIARKLAP 156 (468)
T ss_pred ----HH--------HHHHHHHHHHHHHHHHHHHHhCCccccCc--cccceeEEEEecceeEEEEccCchHHHHHHHHHHH
Confidence 22 23555666666666544322 23222211 1234567889999999999998 696 46799999
Q ss_pred HHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CchHHHhhcCCCCccEEEeecCHHHHHHHHHhc
Q 005047 424 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST 501 (716)
Q Consensus 424 ALaaGNtvv~Kps~~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a 501 (716)
||++||+||+|||+.+|+++..+++++++ + +|+|++|+|+| ++++++.|..||++|+|+||||+.+|+.|++.+
T Consensus 157 AL~aGN~VVlKps~~~p~~~~~l~~~~~~----aglP~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~a 232 (468)
T cd07088 157 ALVTGNTIVIKPSEETPLNALEFAELVDE----AGLPAGVLNIVTGRGSVVGDALVAHPKVGMISLTGSTEAGQKIMEAA 232 (468)
T ss_pred HHHcCCEEEEECCCcchHHHHHHHHHHHH----cCcCccceEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHH
Confidence 99999999999999999999999999986 7 99999999996 456788888999999999999999999998876
Q ss_pred ---CCCEEEecCCcceEEEcCCCCHHHHHHHHHHhcCCCCC-ccccccceEEEeCccCChhhHHHHHHHHHhcCC-----
Q 005047 502 ---KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMVETLLVHKDLACNGALNELVVELQHEGV----- 572 (716)
Q Consensus 502 ---~~~~~lElGGk~p~iV~~dADl~~Aa~~iv~~~f~n~g-~C~a~~~rv~V~~~i~dd~f~~~l~~~~~~~~~----- 572 (716)
.+|+++|||||||+||++|||+|.|++.+++|+|.|+| .|+++ +|+|||+++| |+|+++|+++++++++
T Consensus 233 a~~~~~~~lelGG~~~~iV~~dadl~~aa~~iv~~~~~~~GQ~C~a~-~rv~V~~~i~-d~f~~~l~~~~~~~~~g~p~~ 310 (468)
T cd07088 233 AENITKVSLELGGKAPAIVMKDADLDLAVKAIVDSRIINCGQVCTCA-ERVYVHEDIY-DEFMEKLVEKMKAVKVGDPFD 310 (468)
T ss_pred HhcCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHhcccCcCCcCC-eEEEEcHHHH-HHHHHHHHHHHHhcCCCCCCC
Confidence 38999999999999999999999999999999999987 99999 9999999999 7999999999887532
Q ss_pred -----------------------------EE-ecCccc---cc-cc-c-C-----CCCccccccccCceEEEEEeCCHHH
Q 005047 573 -----------------------------GL-FGGPRA---SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRA 611 (716)
Q Consensus 573 -----------------------------~~-~g~~~~---~~-~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~de 611 (716)
++ .|+... .+ |+ | | ++|++++||+||||++|++|+|+||
T Consensus 311 ~~~~~gpli~~~~~~~~~~~i~~a~~~ga~vl~gg~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~e 390 (468)
T cd07088 311 AATDMGPLVNEAALDKVEEMVERAVEAGATLLTGGKRPEGEKGYFYEPTVLTNVRQDMEIVQEEIFGPVLPVVKFSSLDE 390 (468)
T ss_pred CCCccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCceeEcCEEEecCCCCCchhhCCCcCCeEEEEecCCHHH
Confidence 11 233221 23 33 5 2 3689999999999999999999999
Q ss_pred HHHHHHhcCCCceeEEEccCHHHHHHHHHccCcceEEEcCCcCCCCCCcccCcceeeccccccccccccchhcccEEEEE
Q 005047 612 AIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWI 691 (716)
Q Consensus 612 Ai~~aN~~~~GL~a~i~t~d~~~a~~~~~~~~~G~v~vN~~~~~~~~~p~g~g~~sG~~~~~~~~~g~~gl~~ft~~k~v 691 (716)
||+++|+++|||++||||+|.+++++|++++++|.|+||++.......||||.+.||+| +++|++|+++||+.|+|
T Consensus 391 ai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~k~SG~G----~~~g~~~l~~~t~~k~v 466 (468)
T cd07088 391 AIELANDSEYGLTSYIYTENLNTAMRATNELEFGETYINRENFEAMQGFHAGWKKSGLG----GADGKHGLEEYLQTKVV 466 (468)
T ss_pred HHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccccCC----cCchHHHHHHHhceeEE
Confidence 99999999999999999999999999999999999999998766566799999999986 35799999999999998
Q ss_pred E
Q 005047 692 L 692 (716)
Q Consensus 692 ~ 692 (716)
+
T Consensus 467 ~ 467 (468)
T cd07088 467 Y 467 (468)
T ss_pred e
Confidence 5
No 74
>PRK03137 1-pyrroline-5-carboxylate dehydrogenase; Provisional
Probab=100.00 E-value=2e-71 Score=629.71 Aligned_cols=397 Identities=19% Similarity=0.228 Sum_probs=336.0
Q ss_pred HHHHh-cCCcceeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Q 005047 267 IIKVL-EGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQ 345 (716)
Q Consensus 267 l~~~~-tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~ 345 (716)
+.+|. +|+.++++..++ .+++++++++|++||+.|++++.++|.++|++++++|++++++|++++++|.+++.
T Consensus 54 ~~~P~~t~~~i~~~~~a~------~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~ 127 (514)
T PRK03137 54 SINPANKSEVVGRVSKAT------KELAEKAMQAALEAFETWKKWSPEDRARILLRAAAIIRRRKHEFSAWLVKEAGKPW 127 (514)
T ss_pred eECCCCCCceEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHcCCCH
Confidence 36788 599999999988 89999999999999999999999999999999999999999999999887765432
Q ss_pred HhchhHHHHHHhhcCHHHHHHHHHHHHHHhcccccc--cccccccccCCCeEEEEeecceeEEEEEcCC-Cch-hHHHHH
Q 005047 346 EAGYAKSLVSRLALKPGKISSLAKSIRILADMEEPI--GQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIA 421 (716)
Q Consensus 346 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~-~P~-~~~~~~ 421 (716)
.++ ..|+...++.+++++...+.. +..... ..+...+++++|+|||++|+|| ||. ++.+++
T Consensus 128 ----~~a--------~~ev~~~~~~~~~~a~~~~~~~~~~~~~~---~~g~~~~~~~~P~GVv~~I~PwN~P~~~~~~~i 192 (514)
T PRK03137 128 ----AEA--------DADTAEAIDFLEYYARQMLKLADGKPVES---RPGEHNRYFYIPLGVGVVISPWNFPFAIMAGMT 192 (514)
T ss_pred ----HHH--------HHHHHHHHHHHHHHHHHHHHhcCCccccC---CCCceEEEEEecCcEEEEECCCccHHHHHHHHH
Confidence 122 125555666666655433211 111111 1234567889999999999999 686 568999
Q ss_pred HHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CchHHHhhcCCCCccEEEeecCHHHHHHHHH
Q 005047 422 SLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKE 499 (716)
Q Consensus 422 ~~ALaaGNtvv~Kps~~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~ 499 (716)
++||++||+||+|||+.||+++..|++++.+ + +|+|++|+|+| +.+++..|..||+|++|+||||+.+|+.|++
T Consensus 193 ~~ALaaGN~VVlKPs~~tp~~a~~l~~~l~~----aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~ 268 (514)
T PRK03137 193 LAAIVAGNTVLLKPASDTPVIAAKFVEVLEE----AGLPAGVVNFVPGSGSEVGDYLVDHPKTRFITFTGSREVGLRIYE 268 (514)
T ss_pred HHHHHcCCEEEEECCCCCcHHHHHHHHHHHH----hCCCCCcEEEeecCchHHHHHHhcCCCcCEEEEECCcHHHHHHHH
Confidence 9999999999999999999999999999986 7 99999999996 5678888889999999999999999999998
Q ss_pred hcC---------CCEEEecCCcceEEEcCCCCHHHHHHHHHHhcCCCCC-ccccccceEEEeCccCChhhHHHHHHHHHh
Q 005047 500 STK---------IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMVETLLVHKDLACNGALNELVVELQH 569 (716)
Q Consensus 500 ~a~---------~~~~lElGGk~p~iV~~dADl~~Aa~~iv~~~f~n~g-~C~a~~~rv~V~~~i~dd~f~~~l~~~~~~ 569 (716)
.++ ||+++|||||||+||++|||+|.|++.+++++|.|+| .|+|+ +|+|||+++| |+|+++|++++++
T Consensus 269 ~aa~~~~~~~~l~~v~lElgGk~~~iV~~daDl~~Aa~~i~~~~~~~~GQ~C~a~-~rv~V~~~v~-d~f~~~l~~~~~~ 346 (514)
T PRK03137 269 RAAKVQPGQIWLKRVIAEMGGKDAIVVDEDADLDLAAESIVASAFGFSGQKCSAC-SRAIVHEDVY-DEVLEKVVELTKE 346 (514)
T ss_pred HHhcccccccccceEEecCCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCCCccC-eEEEEeHHHH-HHHHHHHHHHHHh
Confidence 763 6999999999999999999999999999999999987 99999 9999999999 7999999999887
Q ss_pred cCC--------------------------------E-EecCccc--ccc-c-c-C-----CCCccccccccCceEEEEEe
Q 005047 570 EGV--------------------------------G-LFGGPRA--SKL-L-Q-I-----PETRLFHHEYNSMVCTVEIV 606 (716)
Q Consensus 570 ~~~--------------------------------~-~~g~~~~--~~~-~-p-v-----~~~~~~~eE~FGPVl~v~~~ 606 (716)
+.+ + +.|+... .++ + | | +++++++||+||||++|++|
T Consensus 347 l~~g~p~~~~~~Gpli~~~~~~~v~~~v~~a~~~~~vl~Gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~ 426 (514)
T PRK03137 347 LTVGNPEDNAYMGPVINQASFDKIMSYIEIGKEEGRLVLGGEGDDSKGYFIQPTIFADVDPKARIMQEEIFGPVVAFIKA 426 (514)
T ss_pred CCCCCCCCccCcCCCCCHHHHHHHHHHHHHHHhCCEEEeCCCcCCCCceEEeeEEEeCCCCCCHHHhCCCCCceEEEEec
Confidence 632 1 1233221 133 3 5 2 46899999999999999999
Q ss_pred CCHHHHHHHHHhcCCCceeEEEccCHHHHHHHHHccCcceEEEcCCcCC--CCCCcccCcceeeccccccccccccchhc
Q 005047 607 DDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRF--CDGARFGLGAEVGISTSRIHARGPVGVEG 684 (716)
Q Consensus 607 ~~~deAi~~aN~~~~GL~a~i~t~d~~~a~~~~~~~~~G~v~vN~~~~~--~~~~p~g~g~~sG~~~~~~~~~g~~gl~~ 684 (716)
+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++... .+.+||||.+.||+|. +++|++|+++
T Consensus 427 ~~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~k~SG~G~---~~gg~~~l~~ 503 (514)
T PRK03137 427 KDFDHALEIANNTEYGLTGAVISNNREHLEKARREFHVGNLYFNRGCTGAIVGYHPFGGFNMSGTDS---KAGGPDYLLL 503 (514)
T ss_pred CCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCCcccccCCc---ccCCHHHHHH
Confidence 9999999999999999999999999999999999999999999986433 2457999999999862 2468899999
Q ss_pred ccEEEEEEE
Q 005047 685 LLTTRWILR 693 (716)
Q Consensus 685 ft~~k~v~~ 693 (716)
||+.|+|..
T Consensus 504 ft~~k~v~~ 512 (514)
T PRK03137 504 FLQAKTVSE 512 (514)
T ss_pred hceEEEEEE
Confidence 999999865
No 75
>cd07098 ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and 22A1-like. Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation.
Probab=100.00 E-value=1.6e-71 Score=625.71 Aligned_cols=403 Identities=20% Similarity=0.223 Sum_probs=336.1
Q ss_pred HHhcCCcceeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhc
Q 005047 269 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAG 348 (716)
Q Consensus 269 ~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~g 348 (716)
+|.+|+.++++..++ .+|+++++++|++||+.|+++|.++|.++|++++++|++++++|++++.+|++++.
T Consensus 2 ~P~tg~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~--- 72 (465)
T cd07098 2 DPATGQHLGSVPADT------PEDVDEAIAAARAAQREWAKTSFAERRKVLRSLLKYILENQEEICRVACRDTGKTM--- 72 (465)
T ss_pred CCCCCCeeEEeeCCC------HHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH---
Confidence 467899999998888 88999999999999999999999999999999999999999999999887765432
Q ss_pred hhHHHHHHhhcCHHHHHHHHHHHHHHhccccc-c-cccccccccCCCeEEEEeecceeEEEEEcCC-Cch-hHHHHHHHH
Q 005047 349 YAKSLVSRLALKPGKISSLAKSIRILADMEEP-I-GQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 424 (716)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~-~P~-~~~~~~~~A 424 (716)
.++.. .++...++.+++++...+. . ....+......+...+++++|+|||++|+|| ||. ..++++++|
T Consensus 73 -~~a~~-------~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~n~P~~~~~~~~~~A 144 (465)
T cd07098 73 -VDASL-------GEILVTCEKIRWTLKHGEKALRPESRPGGLLMFYKRARVEYEPLGVVGAIVSWNYPFHNLLGPIIAA 144 (465)
T ss_pred -HHHHH-------HHHHHHHHHHHHHHHHHHHHhCCcccCCccccCCceeEEEEecceeEEEEcccCcHHHHHHHHHHHH
Confidence 22222 2344444445444322111 1 1111110001123456789999999999998 685 567899999
Q ss_pred HHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecCCchHHHhhcCCCCccEEEeecCHHHHHHHHHhc--
Q 005047 425 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST-- 501 (716)
Q Consensus 425 LaaGNtvv~Kps~~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a-- 501 (716)
|++||+||+|||+++|+|+.++++++.++|+++ +|+|++|+|+|..++++.|..||+|++|+||||+.+|+.|++.+
T Consensus 145 LaaGN~VIlKps~~~p~~~~~~~~~~~~~l~~aGlP~gvv~~v~g~~~~~~~L~~~~~v~~V~ftGs~~~g~~v~~~a~~ 224 (465)
T cd07098 145 LFAGNAIVVKVSEQVAWSSGFFLSIIRECLAACGHDPDLVQLVTCLPETAEALTSHPVIDHITFIGSPPVGKKVMAAAAE 224 (465)
T ss_pred HHcCCEEEEECCCcCcHHHHHHHHHHHHHHHhcCCCCCeEEEEECCHHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHh
Confidence 999999999999999999999999999888889 99999999997546788888999999999999999999999876
Q ss_pred -CCCEEEecCCcceEEEcCCCCHHHHHHHHHHhcCCCCC-ccccccceEEEeCccCChhhHHHHHHHHHhcC--------
Q 005047 502 -KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMVETLLVHKDLACNGALNELVVELQHEG-------- 571 (716)
Q Consensus 502 -~~~~~lElGGk~p~iV~~dADl~~Aa~~iv~~~f~n~g-~C~a~~~rv~V~~~i~dd~f~~~l~~~~~~~~-------- 571 (716)
.+|+++|||||||+||++|||+|.|++.+++|+|.|+| .|+|+ +|+|||+++| |+|+++|+++++++.
T Consensus 225 ~~~~~~lelgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~-~rv~V~~~i~-d~f~~~L~~~~~~l~~G~p~~~~ 302 (465)
T cd07098 225 SLTPVVLELGGKDPAIVLDDADLDQIASIIMRGTFQSSGQNCIGI-ERVIVHEKIY-DKLLEILTDRVQALRQGPPLDGD 302 (465)
T ss_pred cCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCC-cEEEEcHHHH-HHHHHHHHHHHHhcCCCCCCCCC
Confidence 49999999999999999999999999999999999987 99999 9999999999 799999999887652
Q ss_pred --------------------------CEE-ecCccc------ccc-c-c-C-----CCCccccccccCceEEEEEeCCHH
Q 005047 572 --------------------------VGL-FGGPRA------SKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVDDVR 610 (716)
Q Consensus 572 --------------------------~~~-~g~~~~------~~~-~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~d 610 (716)
+++ .|+... .++ + | | +++++++||+||||++|++|+|+|
T Consensus 303 ~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~ 382 (465)
T cd07098 303 VDVGAMISPARFDRLEELVADAVEKGARLLAGGKRYPHPEYPQGHYFPPTLLVDVTPDMKIAQEEVFGPVMVVMKASDDE 382 (465)
T ss_pred CCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCcCcCCCCcEEcCEEEeCCCCCCHHHhCCCcCCeEEEEEeCCHH
Confidence 122 233221 123 3 5 2 357899999999999999999999
Q ss_pred HHHHHHHhcCCCceeEEEccCHHHHHHHHHccCcceEEEcCCcCC--CCCCcccCcceeeccccccccccccchhcccEE
Q 005047 611 AAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRF--CDGARFGLGAEVGISTSRIHARGPVGVEGLLTT 688 (716)
Q Consensus 611 eAi~~aN~~~~GL~a~i~t~d~~~a~~~~~~~~~G~v~vN~~~~~--~~~~p~g~g~~sG~~~~~~~~~g~~gl~~ft~~ 688 (716)
|||+++|+++|||++||||+|.+++.++++++++|.|+||++... .+..||||.+.||+| +++|++|+++||+.
T Consensus 383 eai~~~n~~~~gLsa~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~PfgG~k~SG~G----~~~g~~~~~~~~~~ 458 (465)
T cd07098 383 EAVEIANSTEYGLGASVFGKDIKRARRIASQLETGMVAINDFGVNYYVQQLPFGGVKGSGFG----RFAGEEGLRGLCNP 458 (465)
T ss_pred HHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCcCccccccCC----ccChHHHHHHhhee
Confidence 999999999999999999999999999999999999999986422 357899999999986 35799999999999
Q ss_pred EEEEEc
Q 005047 689 RWILRG 694 (716)
Q Consensus 689 k~v~~~ 694 (716)
|+|.++
T Consensus 459 k~~~~~ 464 (465)
T cd07098 459 KSVTED 464 (465)
T ss_pred EEEEEe
Confidence 999763
No 76
>PRK09407 gabD2 succinic semialdehyde dehydrogenase; Reviewed
Probab=100.00 E-value=1.7e-71 Score=630.95 Aligned_cols=397 Identities=17% Similarity=0.179 Sum_probs=331.9
Q ss_pred HHhcCCcceeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhc
Q 005047 269 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAG 348 (716)
Q Consensus 269 ~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~g 348 (716)
+|.+|+.++++..++ .+|+++++++|++||+.|+++|.++|.++|++++++|++++++|++++++|++++..
T Consensus 38 nP~tg~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~e~Gk~~~-- 109 (524)
T PRK09407 38 APFTGEPLATVPVST------AADVEAAFARARAAQRAWAATPVRERAAVLLRFHDLVLENREELLDLVQLETGKARR-- 109 (524)
T ss_pred CCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH--
Confidence 367899999999888 899999999999999999999999999999999999999999999999888765432
Q ss_pred hhHHHHHHhhcCHHHHHHHHHHHHHHhcccc-cccccccccccCCCeEEEEeecceeEEEEEcCC-Cch-hHHHHHHHHH
Q 005047 349 YAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAI 425 (716)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~-~P~-~~~~~~~~AL 425 (716)
++. .|+...+..+++++...+ ..+..............+..++|+|||++|+|| ||. +.+++++|||
T Consensus 110 --~a~--------~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P~N~Pl~~~~~~~~~AL 179 (524)
T PRK09407 110 --HAF--------EEVLDVALTARYYARRAPKLLAPRRRAGALPVLTKTTELRQPKGVVGVISPWNYPLTLAVSDAIPAL 179 (524)
T ss_pred --HHH--------HHHHHHHHHHHHHHHHHHHhhCCccccccCCCCceEEEEEecceEEEEEeCCCChHHHHHHHHHHHH
Confidence 221 244444444444443221 111110000001123567889999999999998 695 5789999999
Q ss_pred HhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CchHHHhhcCCCCccEEEeecCHHHHHHHHHhcC-
Q 005047 426 RSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK- 502 (716)
Q Consensus 426 aaGNtvv~Kps~~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a~- 502 (716)
++||+||+|||+.||+++.++++++.+ + +|+|++|+|+| +.++++.|..| +|+|+||||+++|+.|++.++
T Consensus 180 aaGN~VIlKPs~~tp~~~~~l~~ll~e----aGlP~gvv~~v~g~~~~~~~~L~~~--~d~V~fTGs~~~g~~v~~~aa~ 253 (524)
T PRK09407 180 LAGNAVVLKPDSQTPLTALAAVELLYE----AGLPRDLWQVVTGPGPVVGTALVDN--ADYLMFTGSTATGRVLAEQAGR 253 (524)
T ss_pred HcCCEEEEECCCCCHHHHHHHHHHHHH----cCCCcccEEEEecCCchHHHHHHhc--CCEEEEECCHHHHHHHHHHHHh
Confidence 999999999999999999999999986 8 99999999996 56677877765 899999999999999998874
Q ss_pred --CCEEEecCCcceEEEcCCCCHHHHHHHHHHhcCCCCC-ccccccceEEEeCccCChhhHHHHHHHHHhcCC-------
Q 005047 503 --IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMVETLLVHKDLACNGALNELVVELQHEGV------- 572 (716)
Q Consensus 503 --~~~~lElGGk~p~iV~~dADl~~Aa~~iv~~~f~n~g-~C~a~~~rv~V~~~i~dd~f~~~l~~~~~~~~~------- 572 (716)
+|+++|||||||+||++|||++.|++.+++|+|.|+| .|+|+ +|+|||+++| |+|+++|+++++++++
T Consensus 254 ~~~~v~lElGGknp~iV~~dADl~~Aa~~i~~~~f~~sGQ~C~a~-~rv~V~~~v~-d~f~~~L~~~~~~l~~G~~~~~~ 331 (524)
T PRK09407 254 RLIGFSLELGGKNPMIVLDDADLDKAAAGAVRACFSNAGQLCISI-ERIYVHESIY-DEFVRAFVAAVRAMRLGAGYDYS 331 (524)
T ss_pred cCCcEEEECCCCceeEECCCCCHHHHHHHHHHHHHhcCCCCCCCC-cEEEEcHHHH-HHHHHHHHHHHHhcCCCCCCCcC
Confidence 8999999999999999999999999999999999976 99999 9999999999 7999999999887631
Q ss_pred ---------------------------EE-ecCccc---cccc--c-C-----CCCccccccccCceEEEEEeCCHHHHH
Q 005047 573 ---------------------------GL-FGGPRA---SKLL--Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAI 613 (716)
Q Consensus 573 ---------------------------~~-~g~~~~---~~~~--p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi 613 (716)
++ .|+... .++| | | ++|++++||+||||++|++|+|+||||
T Consensus 332 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~deai 411 (524)
T PRK09407 332 ADMGSLISEAQLETVSAHVDDAVAKGATVLAGGKARPDLGPLFYEPTVLTGVTPDMELAREETFGPVVSVYPVADVDEAV 411 (524)
T ss_pred CccCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCceEeCEEEeCCCCCChHHhCCCCCCeEEEEeeCCHHHHH
Confidence 22 243221 1233 5 2 358999999999999999999999999
Q ss_pred HHHHhcCCCceeEEEccCHHHHHHHHHccCcceEEEcCCcC---CCCCCcccCcceeeccccccccccccchhcccEEEE
Q 005047 614 DHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTR---FCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRW 690 (716)
Q Consensus 614 ~~aN~~~~GL~a~i~t~d~~~a~~~~~~~~~G~v~vN~~~~---~~~~~p~g~g~~sG~~~~~~~~~g~~gl~~ft~~k~ 690 (716)
+++|+++|||++||||+|.++++++++++++|.|+||++.. ..+..||||.+.||+| +++|++|+++||+.|+
T Consensus 412 ~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~v~IN~~~~~~~~~~~~PfGG~k~SG~G----~~~g~~~l~~ft~~k~ 487 (524)
T PRK09407 412 ERANDTPYGLNASVWTGDTARGRAIAARIRAGTVNVNEGYAAAWGSVDAPMGGMKDSGLG----RRHGAEGLLKYTESQT 487 (524)
T ss_pred HHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCcCcCCCCCCCCCccccccC----ccchHHHHHHhCCeEE
Confidence 99999999999999999999999999999999999998654 2345799999999986 3569999999999999
Q ss_pred EEEcC
Q 005047 691 ILRGN 695 (716)
Q Consensus 691 v~~~~ 695 (716)
|+++.
T Consensus 488 v~~~~ 492 (524)
T PRK09407 488 IATQR 492 (524)
T ss_pred EEEcc
Confidence 98764
No 77
>cd07102 ALDH_EDX86601 Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD.
Probab=100.00 E-value=2.1e-71 Score=623.17 Aligned_cols=394 Identities=20% Similarity=0.220 Sum_probs=332.0
Q ss_pred HHhcCCcceeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhc
Q 005047 269 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAG 348 (716)
Q Consensus 269 ~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~g 348 (716)
+|.+|+.++++...+ .+|+++++++|++||+.|++++..+|.++|++++++|++++++|++++.+|.+++..
T Consensus 2 ~P~t~~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~-- 73 (452)
T cd07102 2 SPIDGSVIAERPLAS------LEAVRAALERARAAQKGWRAVPLEERKAIVTRAVELLAANTDEIAEELTWQMGRPIA-- 73 (452)
T ss_pred CCCCCCEEEEEcCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHhCCCHH--
Confidence 467899999988888 889999999999999999999999999999999999999999999988776654431
Q ss_pred hhHHHHHHhhcCHHHHHHHHHHHHHHhcccc-cccccccccccCCCeEEEEeecceeEEEEEcCC-Cch-hHHHHHHHHH
Q 005047 349 YAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAI 425 (716)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~-~P~-~~~~~~~~AL 425 (716)
++. .|+...++.+++++...+ ..+..... ...+...+.+++|+|||++|+|| ||. +.+++++|||
T Consensus 74 --~~~--------~ev~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~l~~AL 141 (452)
T cd07102 74 --QAG--------GEIRGMLERARYMISIAEEALADIRVP--EKDGFERYIRREPLGVVLIIAPWNYPYLTAVNAVIPAL 141 (452)
T ss_pred --HHH--------HHHHHHHHHHHHHHHHHHHhcCCcccC--CCCCeeEEEEEEeccEEEEEcCCchHHHHHHHHHHHHH
Confidence 221 233434444444332221 11111111 12344567889999999999998 696 5789999999
Q ss_pred HhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecCCchHHHhhcCCCCccEEEeecCHHHHHHHHHhcC--
Q 005047 426 RSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK-- 502 (716)
Q Consensus 426 aaGNtvv~Kps~~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a~-- 502 (716)
++||+||+|||+.+|+++..|.+++++ + +|+|++|+|++..+.+..|..||+||+|+||||+++|+.|++++.
T Consensus 142 aaGN~VVlKps~~~~~~~~~l~~~l~~----aGlP~g~~~~v~g~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~a~~~ 217 (452)
T cd07102 142 LAGNAVILKHSPQTPLCGERFAAAFAE----AGLPEGVFQVLHLSHETSAALIADPRIDHVSFTGSVAGGRAIQRAAAGR 217 (452)
T ss_pred HcCCEEEEECCCCCcHHHHHHHHHHHh----cCCCcCcEEEEeCCchhHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhc
Confidence 999999999999999999999999986 8 999999999964467788888999999999999999999998763
Q ss_pred -CCEEEecCCcceEEEcCCCCHHHHHHHHHHhcCCCCC-ccccccceEEEeCccCChhhHHHHHHHHHhcCC--------
Q 005047 503 -IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMVETLLVHKDLACNGALNELVVELQHEGV-------- 572 (716)
Q Consensus 503 -~~~~lElGGk~p~iV~~dADl~~Aa~~iv~~~f~n~g-~C~a~~~rv~V~~~i~dd~f~~~l~~~~~~~~~-------- 572 (716)
+|+++|||||||+||++|||+|.|++.+++|+|.|+| .|+++ +|+|||+++| |+|+++|+++++++++
T Consensus 218 ~~~v~lelgG~~~~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~-~~v~V~~~v~-~~f~~~L~~~~~~l~vg~p~~~~~ 295 (452)
T cd07102 218 FIKVGLELGGKDPAYVRPDADLDAAAESLVDGAFFNSGQSCCSI-ERIYVHESIY-DAFVEAFVAVVKGYKLGDPLDPST 295 (452)
T ss_pred CCcEEEECCCCCceEEcCCCCHHHHHHHHHHHHHHhCCCCCcCC-cEEEEeHHHH-HHHHHHHHHHHHhccCCCCCCCCC
Confidence 8999999999999999999999999999999999987 99999 9999999999 7999999999876532
Q ss_pred --------------------------EE-ecCcc-----ccc-cc-c-C-----CCCccccccccCceEEEEEeCCHHHH
Q 005047 573 --------------------------GL-FGGPR-----ASK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAA 612 (716)
Q Consensus 573 --------------------------~~-~g~~~-----~~~-~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deA 612 (716)
++ .|+.+ ..+ |+ | | ++|++++||+||||++|++|+|+|||
T Consensus 296 ~~gpli~~~~~~~i~~~i~~a~~~ga~vl~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~ea 375 (452)
T cd07102 296 TLGPVVSARAADFVRAQIADAIAKGARALIDGALFPEDKAGGAYLAPTVLTNVDHSMRVMREETFGPVVGIMKVKSDAEA 375 (452)
T ss_pred CCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCCCCCCCCCCCceEcCEEEecCCCCChhhhcCCcCCeEEEEEeCCHHHH
Confidence 12 23322 113 33 5 2 46899999999999999999999999
Q ss_pred HHHHHhcCCCceeEEEccCHHHHHHHHHccCcceEEEcCCcCCCCCCcccCcceeeccccccccccccchhcccEEEEEE
Q 005047 613 IDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 692 (716)
Q Consensus 613 i~~aN~~~~GL~a~i~t~d~~~a~~~~~~~~~G~v~vN~~~~~~~~~p~g~g~~sG~~~~~~~~~g~~gl~~ft~~k~v~ 692 (716)
|+++|+++|||++||||+|.+++.++++++++|.|+||++....+..||||.++||+| +++|++|+++||+.|+++
T Consensus 376 i~~~n~~~~gL~~~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfgG~k~SG~G----~~~g~~~~~~~~~~k~~~ 451 (452)
T cd07102 376 IALMNDSEYGLTASVWTKDIARAEALGEQLETGTVFMNRCDYLDPALAWTGVKDSGRG----VTLSRLGYDQLTRPKSYH 451 (452)
T ss_pred HHHHhCCCCCceEEEEcCCHHHHHHHHHHcCcceEEECCCCCCCCCCCCCCccccccC----ccchHHHHHHHhceeEEe
Confidence 9999999999999999999999999999999999999998766667899999999986 356999999999999985
No 78
>cd07100 ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like. Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate.
Probab=100.00 E-value=1.5e-71 Score=619.02 Aligned_cols=374 Identities=17% Similarity=0.203 Sum_probs=318.1
Q ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhchhHHHHHHhhcCHHHHHHHHHHHH
Q 005047 293 AREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIR 372 (716)
Q Consensus 293 v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 372 (716)
|++++++|++||+.|+.+|.++|.++|++++++|++++++|++++++|.+++.. ++ ..|+..+++.++
T Consensus 1 v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~----~a--------~~ev~~~~~~~~ 68 (429)
T cd07100 1 IEAALDRAHAAFLAWRKTSFAERAALLRKLADLLRERKDELARLITLEMGKPIA----EA--------RAEVEKCAWICR 68 (429)
T ss_pred CHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHH----HH--------HHHHHHHHHHHH
Confidence 468999999999999999999999999999999999999999998877654432 22 235566666666
Q ss_pred HHhcccccc-c-ccccccccCCCeEEEEeecceeEEEEEcCC-Cch-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHH
Q 005047 373 ILADMEEPI-G-QILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHK 448 (716)
Q Consensus 373 ~~~~~~~~~-g-~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~-~P~-~~~~~~~~ALaaGNtvv~Kps~~tp~t~~~l~~ 448 (716)
+++...+.. + ...+. .+...+++++|+|||++|+|| ||. +.+++++|||++||+||+|||+.+|+++.+|++
T Consensus 69 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~P~GvV~~I~P~N~Pl~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~ 144 (429)
T cd07100 69 YYAENAEAFLADEPIET----DAGKAYVRYEPLGVVLGIMPWNFPFWQVFRFAAPNLMAGNTVLLKHASNVPGCALAIEE 144 (429)
T ss_pred HHHHHHHHhcCCeeccC----CCceEEEEEEeeeEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHH
Confidence 655433211 1 11211 133567889999999999998 696 577899999999999999999999999999999
Q ss_pred HHHHhcccc-cCcCceEEecCCchHHHhhcCCCCccEEEeecCHHHHHHHHHhcC---CCEEEecCCcceEEEcCCCCHH
Q 005047 449 VITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK---IPVLGHADGICHVYVDKSANLD 524 (716)
Q Consensus 449 l~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a~---~~~~lElGGk~p~iV~~dADl~ 524 (716)
++.+ + +|+|++|+|+|..+.+..|..||+|++|+||||+++|+.|++++. ||+++|||||||+||++|||++
T Consensus 145 ~l~~----aglP~gvv~~v~g~~~~~~~l~~~~~i~~v~fTGs~~~g~~i~~~aa~~~~~~~lelgG~~p~iV~~daDl~ 220 (429)
T cd07100 145 LFRE----AGFPEGVFQNLLIDSDQVEAIIADPRVRGVTLTGSERAGRAVAAEAGKNLKKSVLELGGSDPFIVLDDADLD 220 (429)
T ss_pred HHHH----cCCCcCcEEEEeCCchhHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCcceEEecCCCCeeEECCCCCHH
Confidence 9986 7 999999999964345566778999999999999999999998873 8999999999999999999999
Q ss_pred HHHHHHHHhcCCCCC-ccccccceEEEeCccCChhhHHHHHHHHHhcCC-------------------------------
Q 005047 525 VAKNIVIDAKIDYPA-ACNAMVETLLVHKDLACNGALNELVVELQHEGV------------------------------- 572 (716)
Q Consensus 525 ~Aa~~iv~~~f~n~g-~C~a~~~rv~V~~~i~dd~f~~~l~~~~~~~~~------------------------------- 572 (716)
.|++.+++|+|.|+| .|+++ +|+|||+++| |+|+++|+++++++.+
T Consensus 221 ~aa~~i~~~~~~~~GQ~C~a~-~rv~v~~~i~-~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~ 298 (429)
T cd07100 221 KAVKTAVKGRLQNAGQSCIAA-KRFIVHEDVY-DEFLEKFVEAMAALKVGDPMDEDTDLGPLARKDLRDELHEQVEEAVA 298 (429)
T ss_pred HHHHHHHHHHHhccCCCCCCC-eEEEEcHHHH-HHHHHHHHHHHHhccCCCCccCCCCccCCCCHHHHHHHHHHHHHHHH
Confidence 999999999999987 99999 9999999999 7999999999887531
Q ss_pred ---EE-ecCccc--ccc-c-c-C-----CCCccccccccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEccCHHHHHHH
Q 005047 573 ---GL-FGGPRA--SKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETF 638 (716)
Q Consensus 573 ---~~-~g~~~~--~~~-~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~i~t~d~~~a~~~ 638 (716)
++ .|+.+. .++ + | | ++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++
T Consensus 299 ~Ga~~~~gg~~~~~~g~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~ 378 (429)
T cd07100 299 AGATLLLGGKRPDGPGAFYPPTVLTDVTPGMPAYDEELFGPVAAVIKVKDEEEAIALANDSPFGLGGSVFTTDLERAERV 378 (429)
T ss_pred CCCEEEeCCCcCCCCCeEEcCEEeecCCCCCHHHhCCCCCCeEEEeeeCCHHHHHHHHhCCCcCceEEEECCCHHHHHHH
Confidence 22 243322 123 3 5 2 3689999999999999999999999999999999999999999999999999
Q ss_pred HHccCcceEEEcCCcCCCCCCcccCcceeeccccccccccccchhcccEEEEEE
Q 005047 639 LCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 692 (716)
Q Consensus 639 ~~~~~~G~v~vN~~~~~~~~~p~g~g~~sG~~~~~~~~~g~~gl~~ft~~k~v~ 692 (716)
++++++|.|+||++....+.+||||.+.||+| +++|++|+++||+.|+|+
T Consensus 379 ~~~l~~g~v~iN~~~~~~~~~pfGG~~~SG~G----~~~g~~~l~~~~~~k~v~ 428 (429)
T cd07100 379 ARRLEAGMVFINGMVKSDPRLPFGGVKRSGYG----RELGRFGIREFVNIKTVW 428 (429)
T ss_pred HHhCCcCeEEECCCCCCCCCCCcCCccccccC----CcchHHHHHHhcceeEEe
Confidence 99999999999998766677899999999986 356999999999999985
No 79
>cd07136 ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydrogenase ywdH-like. Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD.
Probab=100.00 E-value=1.6e-71 Score=617.45 Aligned_cols=381 Identities=19% Similarity=0.202 Sum_probs=313.3
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhchhHHHHHHhhcCHHHHHHHHHHHHHH
Q 005047 295 EMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRIL 374 (716)
Q Consensus 295 ~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (716)
+.+++|++||+.|+++|..+|+++|++++++|++|+|||++++++|.++.. .++...++.....++++++..++.+
T Consensus 2 ~~v~~a~~a~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~----~~a~~~ev~~~~~~~~~~~~~~~~~ 77 (449)
T cd07136 2 SLVEKQRAFFKTGATKDVEFRIEQLKKLKQAIKKYENEILEALKKDLGKSE----FEAYMTEIGFVLSEINYAIKHLKKW 77 (449)
T ss_pred hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH----HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 578899999999999999999999999999999999999999887765442 2332222222333344444433333
Q ss_pred hcccccccccccccccCCCeEEEEeecceeEEEEEcCC-Cch-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHH
Q 005047 375 ADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITS 452 (716)
Q Consensus 375 ~~~~~~~g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~-~P~-~~~~~~~~ALaaGNtvv~Kps~~tp~t~~~l~~l~~~ 452 (716)
... ...+......+...++.++|+|||++|+|| ||. +.+++++|||++||+||+|||+.||+++..+++++++
T Consensus 78 ~~~-----~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vi~Kps~~tp~~~~~l~~~~~~ 152 (449)
T cd07136 78 MKP-----KRVKTPLLNFPSKSYIYYEPYGVVLIIAPWNYPFQLALAPLIGAIAAGNTAVLKPSELTPNTSKVIAKIIEE 152 (449)
T ss_pred hCC-----CccCCccccCCceeEEEEecCeEEEEECCCchHHHHHHHHHHHHHhcCCEEEEECcccchHHHHHHHHHHHH
Confidence 211 011110001234567889999999999998 695 5789999999999999999999999999999999986
Q ss_pred hcccccCcCceEEecCCchHHHhhcCCCCccEEEeecCHHHHHHHHHhcC---CCEEEecCCcceEEEcCCCCHHHHHHH
Q 005047 453 AIPDTVGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK---IPVLGHADGICHVYVDKSANLDVAKNI 529 (716)
Q Consensus 453 al~~alP~gvv~vv~~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a~---~~~~lElGGk~p~iV~~dADl~~Aa~~ 529 (716)
++|+|++|+|+|+.+.+..|.+|+ ||+|+||||+++|+.|++.+. +|+++|||||||+||++|||+|.|++.
T Consensus 153 ----alP~gv~~~v~g~~~~~~~L~~~~-v~~V~fTGS~~~g~~i~~~aa~~~~~v~lElgGknp~iV~~dADld~aa~~ 227 (449)
T cd07136 153 ----TFDEEYVAVVEGGVEENQELLDQK-FDYIFFTGSVRVGKIVMEAAAKHLTPVTLELGGKSPCIVDEDANLKLAAKR 227 (449)
T ss_pred ----hCCCCEEEEEeCChHHHHHHhcCC-CCEEEEECCHHHHHHHHHHHHhcCCCEEEEecCCCeEEECCCCCHHHHHHH
Confidence 599999999997544566666665 999999999999999998873 899999999999999999999999999
Q ss_pred HHHhcCCCCC-ccccccceEEEeCccCChhhHHHHHHHHHhcCCE-----------------------------EecCcc
Q 005047 530 VIDAKIDYPA-ACNAMVETLLVHKDLACNGALNELVVELQHEGVG-----------------------------LFGGPR 579 (716)
Q Consensus 530 iv~~~f~n~g-~C~a~~~rv~V~~~i~dd~f~~~l~~~~~~~~~~-----------------------------~~g~~~ 579 (716)
+++++|.|+| .|+|+ +|+|||+++| |+|+++|+++++++... +.|+..
T Consensus 228 i~~~~~~~~GQ~C~a~-~rv~V~~~i~-d~f~~~L~~~~~~~~~g~p~~~~~~gpli~~~~~~~i~~~i~~a~~~~gG~~ 305 (449)
T cd07136 228 IVWGKFLNAGQTCVAP-DYVLVHESVK-EKFIKELKEEIKKFYGEDPLESPDYGRIINEKHFDRLAGLLDNGKIVFGGNT 305 (449)
T ss_pred HHHHHHcccCCcccCC-CEEEEcHHHH-HHHHHHHHHHHHHhcCCCCCCCCCccCcCCHHHHHHHHHHHhcceEEECCCc
Confidence 9999999987 99999 9999999999 79999999999886210 123322
Q ss_pred c-cc-cc-c-C-----CCCccccccccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEccCHHHHHHHHHccCcceEEEc
Q 005047 580 A-SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHN 650 (716)
Q Consensus 580 ~-~~-~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~i~t~d~~~a~~~~~~~~~G~v~vN 650 (716)
. .+ ++ | | ++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||
T Consensus 306 ~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~~~~eai~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN 385 (449)
T cd07136 306 DRETLYIEPTILDNVTWDDPVMQEEIFGPILPVLTYDTLDEAIEIIKSRPKPLALYLFSEDKKVEKKVLENLSFGGGCIN 385 (449)
T ss_pred CCCCCEEeeEEEecCCCcChHHhccccCCeeEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEEC
Confidence 1 13 33 5 2 3689999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcCC--CCCCcccCcceeeccccccccccccchhcccEEEEEEEcC
Q 005047 651 ASTRF--CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGN 695 (716)
Q Consensus 651 ~~~~~--~~~~p~g~g~~sG~~~~~~~~~g~~gl~~ft~~k~v~~~~ 695 (716)
+.... .+..||||.+.||+| +++|++|+++||+.|+|+++.
T Consensus 386 ~~~~~~~~~~~PfGG~k~SG~G----~~~g~~~l~~~t~~k~v~~~~ 428 (449)
T cd07136 386 DTIMHLANPYLPFGGVGNSGMG----SYHGKYSFDTFSHKKSILKKS 428 (449)
T ss_pred CccccccCCCCCccCcCcccCC----cccCHHHHHHhccceEEEEcC
Confidence 86543 367899999999986 356999999999999998864
No 80
>TIGR03240 arg_catab_astD succinylglutamic semialdehyde dehydrogenase. Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism.
Probab=100.00 E-value=4.4e-71 Score=623.47 Aligned_cols=396 Identities=16% Similarity=0.110 Sum_probs=330.5
Q ss_pred HHHhcCCcceeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHh
Q 005047 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 347 (716)
Q Consensus 268 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~ 347 (716)
.+|.||+.++++..++ .+|+++++++|++||++|+++|.++|.++|++++++|++|+++|++++.+|.+++..
T Consensus 18 ~~P~t~~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~- 90 (484)
T TIGR03240 18 TNPATQEVLWQGAAAS------AAQVEAAVAAARAAFPAWARLSLEERIAVVQRFAALLEERKEALARVIARETGKPLW- 90 (484)
T ss_pred ECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH-
Confidence 5678899999998888 899999999999999999999999999999999999999999999998877654321
Q ss_pred chhHHHHHHhhcCHHHHHHHHHHHHHHhccc-ccccccccccccCCCeEEEEeecceeEEEEEcCC-Cch-hHHHHHHHH
Q 005047 348 GYAKSLVSRLALKPGKISSLAKSIRILADME-EPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 424 (716)
Q Consensus 348 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~-~P~-~~~~~~~~A 424 (716)
++ ..++..+++.+++++... +..|..... ..+...++.++|+|||++|+|| ||. +..+++++|
T Consensus 91 ---~a--------~~ev~~~~~~~~~~~~~~~~~~g~~~~~---~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~i~~A 156 (484)
T TIGR03240 91 ---ET--------RTEVASMIGKVAISIKAYHERTGESENP---MPDGRAVLRHRPHGVVAVFGPYNFPGHLPNGHIVPA 156 (484)
T ss_pred ---HH--------HHHHHHHHHHHHHHHHHHHHhcCccccC---CCCceeEEEEecccEEEEECCCchHHHHHHHHHHHH
Confidence 11 235555666555543222 122322111 1223467889999999999998 695 568999999
Q ss_pred HHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecCCchHHHhhcCCCCccEEEeecCHHHHHHHHHhc--
Q 005047 425 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST-- 501 (716)
Q Consensus 425 LaaGNtvv~Kps~~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a-- 501 (716)
|++||+||+|||+.||+|+..+++++++ + +|+|+||+|+|+.++++.|..||+||+|+||||+++|+.|++.+
T Consensus 157 LaaGN~VVlKPs~~tp~t~~~l~~~~~~----aGlP~gvv~~v~g~~~~~~~L~~~~~vd~V~fTGS~~~G~~i~~~aa~ 232 (484)
T TIGR03240 157 LLAGNTVVFKPSELTPWVAEETVKLWEK----AGLPAGVLNLVQGARETGVALAAHPDIDGLLFTGSSNTGHLLHRQFAG 232 (484)
T ss_pred HHcCCEEEEECCccccHHHHHHHHHHHH----hCcCcccEEEEeCCHHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhhh
Confidence 9999999999999999999999999986 7 99999999997666788888999999999999999999999875
Q ss_pred --CCCEEEecCCcceEEEcCCCCHHHHHHHHHHhcCCCCC-ccccccceEEEeCcc-CChhhHHHHHHHHHhcCC-----
Q 005047 502 --KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMVETLLVHKDL-ACNGALNELVVELQHEGV----- 572 (716)
Q Consensus 502 --~~~~~lElGGk~p~iV~~dADl~~Aa~~iv~~~f~n~g-~C~a~~~rv~V~~~i-~dd~f~~~l~~~~~~~~~----- 572 (716)
.+|++||||||||+||++|||+|.|++.+++++|.|+| .|+|+ +|||||+++ | |+|+++|+++++++.+
T Consensus 233 ~~~~~~~lElGGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~-~rv~V~~~~~~-d~f~~~l~~~~~~~~~g~~~~ 310 (484)
T TIGR03240 233 RPEKILALEMGGNNPLIVDEVADIDAAVHLIIQSAFISAGQRCTCA-RRLLVPDGAQG-DAFLARLVEVAERLTVGAWDA 310 (484)
T ss_pred cCCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCC-cEEEEeccccH-HHHHHHHHHHHHhcccCCCCc
Confidence 26799999999999999999999999999999999987 99999 999999998 6 5999999998876521
Q ss_pred ------------------------------EE-ecCcc--ccc-cc-c-C----CCCccccccccCceEEEEEeCCHHHH
Q 005047 573 ------------------------------GL-FGGPR--ASK-LL-Q-I----PETRLFHHEYNSMVCTVEIVDDVRAA 612 (716)
Q Consensus 573 ------------------------------~~-~g~~~--~~~-~~-p-v----~~~~~~~eE~FGPVl~v~~~~~~deA 612 (716)
++ .|+.. ..+ |+ | | ++|++++||+||||++|++|+|+|||
T Consensus 311 ~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~i~PTvl~v~~~~~i~~eE~FGPVl~v~~~~~~~ea 390 (484)
T TIGR03240 311 EPQPFMGAVISLQAAQRLLAAQAKLLALGGKSLLAMRQLDPGAALLTPGIIDVTGVAELPDEEHFGPLLQVIRYDDFDEA 390 (484)
T ss_pred CCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCEEEcCEEEccCCCCHHHhCCCcCCeEEEEEeCCHHHH
Confidence 11 11211 112 33 5 3 35889999999999999999999999
Q ss_pred HHHHHhcCCCceeEEEccCHHHHHHHHHccCcceEEEcCCcCC-CCCCcccCcceeeccccccccccccchhcccEEEEE
Q 005047 613 IDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRF-CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWI 691 (716)
Q Consensus 613 i~~aN~~~~GL~a~i~t~d~~~a~~~~~~~~~G~v~vN~~~~~-~~~~p~g~g~~sG~~~~~~~~~g~~gl~~ft~~k~v 691 (716)
|+++|+++|||++||||+|.++++++++++++|+|+||++... .+.+||||.+.||+| ++.|.++++ |++.|++
T Consensus 391 i~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~~pfGG~~~SG~g----~~~g~~~~~-~~~~~~~ 465 (484)
T TIGR03240 391 IAIANNTRFGLSAGLLSDDRELYDRFLLEIRAGIVNWNKPLTGASSAAPFGGIGASGNH----RPSAYYAAD-YCAYPVA 465 (484)
T ss_pred HHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEECCCCCCCCCCCcCCcccccCC----CCCchHHHh-heeeeEE
Confidence 9999999999999999999999999999999999999986543 356899999999986 345655554 9999999
Q ss_pred EEcC
Q 005047 692 LRGN 695 (716)
Q Consensus 692 ~~~~ 695 (716)
+++.
T Consensus 466 ~~~~ 469 (484)
T TIGR03240 466 SLEA 469 (484)
T ss_pred EEec
Confidence 9875
No 81
>cd07139 ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like. The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD.
Probab=100.00 E-value=1.6e-71 Score=626.65 Aligned_cols=394 Identities=20% Similarity=0.190 Sum_probs=334.9
Q ss_pred HHHhcCCcceeEEecCCccccchhhHHHHHHHHHHHHHH--HhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Q 005047 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRR--LQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQ 345 (716)
Q Consensus 268 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~--w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~ 345 (716)
.+|.+|+.++.+..++ .+++++++++|++||+. |+++|.++|.++|++++++|++|+++|++++.+|.+++.
T Consensus 19 ~~P~tg~~i~~~~~~~------~~~v~~av~~a~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~ 92 (471)
T cd07139 19 VSPATEEVVGRVPEAT------PADVDAAVAAARRAFDNGPWPRLSPAERAAVLRRLADALEARADELARLWTAENGMPI 92 (471)
T ss_pred ECCCCCCEeEEEeCCC------HHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH
Confidence 5678999999998888 88999999999999985 999999999999999999999999999998876654432
Q ss_pred HhchhHHHHHHhhcCHHHHHHHHHHHHHHhccccc-cc-ccccccccCCCeEEEEeecceeEEEEEcCC-Cch-hHHHHH
Q 005047 346 EAGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IG-QILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIA 421 (716)
Q Consensus 346 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g-~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~-~P~-~~~~~~ 421 (716)
. ++. ..++..+++.+++++...+. .+ ...+. ..+...+.+|+|+|||++|+|| ||. +.++++
T Consensus 93 ~----~~~-------~~ev~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~i 158 (471)
T cd07139 93 S----WSR-------RAQGPGPAALLRYYAALARDFPFEERRPG---SGGGHVLVRREPVGVVAAIVPWNAPLFLAALKI 158 (471)
T ss_pred H----HHH-------HHHHHHHHHHHHHHHHHHHHhcCCccccC---CCCceEEEEEEeccEEEEEcCCchHHHHHHHHH
Confidence 1 111 12566666666766644321 11 11111 1234567889999999999998 685 568999
Q ss_pred HHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecCCchHHHhhcCCCCccEEEeecCHHHHHHHHHh
Q 005047 422 SLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKES 500 (716)
Q Consensus 422 ~~ALaaGNtvv~Kps~~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~ 500 (716)
++||++||+||+|||+.+|+++..+.+++.+ + +|+|++|+|+|+.+.+..|..||++++|+||||+.+|+.|++.
T Consensus 159 ~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~----aglP~gv~~~v~g~~~~~~~l~~~~~i~~v~ftGs~~~g~~v~~~ 234 (471)
T cd07139 159 APALAAGCTVVLKPSPETPLDAYLLAEAAEE----AGLPPGVVNVVPADREVGEYLVRHPGVDKVSFTGSTAAGRRIAAV 234 (471)
T ss_pred HHHHhcCCEEEEECCCcCCHHHHHHHHHHHH----cCCCCCcEEEEeCCHHHHHHHhcCCCCCEEEEECcHHHHHHHHHH
Confidence 9999999999999999999999999999986 8 9999999999755678888889999999999999999999887
Q ss_pred cC---CCEEEecCCcceEEEcCCCCHHHHHHHHHHhcCCCCC-ccccccceEEEeCccCChhhHHHHHHHHHhcCC----
Q 005047 501 TK---IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMVETLLVHKDLACNGALNELVVELQHEGV---- 572 (716)
Q Consensus 501 a~---~~~~lElGGk~p~iV~~dADl~~Aa~~iv~~~f~n~g-~C~a~~~rv~V~~~i~dd~f~~~l~~~~~~~~~---- 572 (716)
++ +|+++|||||||+||++|||+|.|++.+++|+|.|+| .|+|+ +|||||++|| |+|+++|+++++++.+
T Consensus 235 ~~~~~~~~~lElGG~np~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~-~~v~V~~~i~-d~f~~~l~~~~~~~~~g~p~ 312 (471)
T cd07139 235 CGERLARVTLELGGKSAAIVLDDADLDAAVPGLVPASLMNNGQVCVAL-TRILVPRSRY-DEVVEALAAAVAALKVGDPL 312 (471)
T ss_pred HHhcCCEEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCcCC-cEEEEeHhHH-HHHHHHHHHHHHhCCcCCCC
Confidence 73 8999999999999999999999999999999999976 99999 9999999999 7999999999877531
Q ss_pred ------------------------------EE-ecCccc----ccc-c-c-C-----CCCccccccccCceEEEEEeCCH
Q 005047 573 ------------------------------GL-FGGPRA----SKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVDDV 609 (716)
Q Consensus 573 ------------------------------~~-~g~~~~----~~~-~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~ 609 (716)
++ .|+... .++ + | | +++++++||+||||++|++|+|+
T Consensus 313 ~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~ 392 (471)
T cd07139 313 DPATQIGPLASARQRERVEGYIAKGRAEGARLVTGGGRPAGLDRGWFVEPTLFADVDNDMRIAQEEIFGPVLSVIPYDDE 392 (471)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCeEEccEEEecCCCcchHHhCccCCCeEEEeecCCH
Confidence 12 233221 133 3 5 2 46899999999999999999999
Q ss_pred HHHHHHHHhcCCCceeEEEccCHHHHHHHHHccCcceEEEcCCcCCCCCCcccCcceeeccccccccccccchhcccEEE
Q 005047 610 RAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTR 689 (716)
Q Consensus 610 deAi~~aN~~~~GL~a~i~t~d~~~a~~~~~~~~~G~v~vN~~~~~~~~~p~g~g~~sG~~~~~~~~~g~~gl~~ft~~k 689 (716)
||||+++|+++|||++||||+|.+++.++++++++|+|+||++. ..+.+||||.+.||+| +++|++|+++||+.|
T Consensus 393 ~eai~~~n~~~~gL~a~i~s~d~~~~~~~~~~l~~G~v~iN~~~-~~~~~PfgG~k~SG~G----~~~g~~~~~~ft~~k 467 (471)
T cd07139 393 DDAVRIANDSDYGLSGSVWTADVERGLAVARRIRTGTVGVNGFR-LDFGAPFGGFKQSGIG----REGGPEGLDAYLETK 467 (471)
T ss_pred HHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCC-CCCCCCCCCcccccCC----ccchHHHHHHHhcee
Confidence 99999999999999999999999999999999999999999876 5567899999999986 357999999999999
Q ss_pred EEE
Q 005047 690 WIL 692 (716)
Q Consensus 690 ~v~ 692 (716)
+|+
T Consensus 468 ~i~ 470 (471)
T cd07139 468 SIY 470 (471)
T ss_pred EEe
Confidence 985
No 82
>cd07099 ALDH_DDALDH Methylomonas sp. 4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid.
Probab=100.00 E-value=3.7e-71 Score=621.36 Aligned_cols=395 Identities=18% Similarity=0.159 Sum_probs=331.9
Q ss_pred HHhcCCcceeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhc
Q 005047 269 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAG 348 (716)
Q Consensus 269 ~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~g 348 (716)
+|.||+.++++...+ .+++++++++|++||+.|++++.++|.++|++++++|++++++|++++.+|.+++..
T Consensus 2 ~P~t~~~~~~~~~~~------~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~-- 73 (453)
T cd07099 2 NPATGEVLGEVPVTD------PAEVAAAVARARAAQRAWAALGVEGRAQRLLRWKRALADHADELAELLHAETGKPRA-- 73 (453)
T ss_pred CCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHH--
Confidence 477899999998888 899999999999999999999999999999999999999999999999877654432
Q ss_pred hhHHHHHHhhcCHHHHHHHHHHHHHHhccccc-ccc-cccccccCCCeEEEEeecceeEEEEEcCC-Cch-hHHHHHHHH
Q 005047 349 YAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQ-ILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 424 (716)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~-~~~~~~~~~~~~~~~~~~PlGVv~~I~p~-~P~-~~~~~~~~A 424 (716)
++ ..++..+++.+++++...+. .+. ..+......+...+++++|+|||++|+|| +|. +.+++++||
T Consensus 74 --~~--------~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~l~~A 143 (453)
T cd07099 74 --DA--------GLEVLLALEAIDWAARNAPRVLAPRKVPTGLLMPNKKATVEYRPYGVVGVISPWNYPLLTPMGDIIPA 143 (453)
T ss_pred --HH--------HHHHHHHHHHHHHHHHHHHHhcCCccccCcccCCCceeEEEEecceEEEEECCCChHHHHHHHHHHHH
Confidence 11 12455555555555433211 111 11110001234567889999999999998 696 568999999
Q ss_pred HHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecCCchHHHhhcCCCCccEEEeecCHHHHHHHHHhc--
Q 005047 425 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST-- 501 (716)
Q Consensus 425 LaaGNtvv~Kps~~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a-- 501 (716)
|++||+||+|||+.+|+++.+|++++.+ + +|+|++|+|+|..+++..|..| .||+|+||||+++|+.|++.+
T Consensus 144 LaaGN~vilKps~~~p~~~~~l~~~l~~----ag~P~g~~~vv~g~~~~~~~l~~~-~vd~V~ftGs~~~g~~i~~~aa~ 218 (453)
T cd07099 144 LAAGNAVVLKPSEVTPLVGELLAEAWAA----AGPPQGVLQVVTGDGATGAALIDA-GVDKVAFTGSVATGRKVMAAAAE 218 (453)
T ss_pred HHcCCEEEEECCccchHHHHHHHHHHHH----cCCCCCeEEEEeCCchHHHHHhcC-CCCEEEEECCHHHHHHHHHHHHh
Confidence 9999999999999999999999999986 7 9999999999644667777766 599999999999999999877
Q ss_pred -CCCEEEecCCcceEEEcCCCCHHHHHHHHHHhcCCCCC-ccccccceEEEeCccCChhhHHHHHHHHHhcCC-------
Q 005047 502 -KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMVETLLVHKDLACNGALNELVVELQHEGV------- 572 (716)
Q Consensus 502 -~~~~~lElGGk~p~iV~~dADl~~Aa~~iv~~~f~n~g-~C~a~~~rv~V~~~i~dd~f~~~l~~~~~~~~~------- 572 (716)
.+|+++|||||||+||++|||++.|++.+++++|.|+| .|+|+ +|+|||++|| |+|+++|+++++++.+
T Consensus 219 ~~~~~~lelgG~~p~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~-~ri~V~~~i~-d~f~~~l~~~~~~l~~G~~~~~~ 296 (453)
T cd07099 219 RLIPVVLELGGKDPMIVLADADLERAAAAAVWGAMVNAGQTCISV-ERVYVHESVY-DEFVARLVAKARALRPGADDIGD 296 (453)
T ss_pred cCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCC-cEEEEcHHHH-HHHHHHHHHHHHhccCCCCCCCC
Confidence 38999999999999999999999999999999999987 99999 9999999999 7999999999887621
Q ss_pred ---------------------------EE-ecCccc--cc-cc-c-C-----CCCccccccccCceEEEEEeCCHHHHHH
Q 005047 573 ---------------------------GL-FGGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAID 614 (716)
Q Consensus 573 ---------------------------~~-~g~~~~--~~-~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi~ 614 (716)
++ .|+.+. .+ ++ | | ++|++++||+||||++|++|+|+||||+
T Consensus 297 ~~~gp~i~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptil~~~~~~~~~~~~E~FgPvl~v~~~~~~~eai~ 376 (453)
T cd07099 297 ADIGPMTTARQLDIVRRHVDDAVAKGAKALTGGARSNGGGPFYEPTVLTDVPHDMDVMREETFGPVLPVMPVADEDEAIA 376 (453)
T ss_pred CcccCCcCHHHHHHHHHHHHHHHhCCCEEEeCCCcCCCCCeEEecEEEecCCCCCHHHhCCCcCCeeEEEeeCCHHHHHH
Confidence 12 244332 23 33 5 2 3688999999999999999999999999
Q ss_pred HHHhcCCCceeEEEccCHHHHHHHHHccCcceEEEcCCcCC--CCCCcccCcceeeccccccccccccchhcccEEEEEE
Q 005047 615 HIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRF--CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 692 (716)
Q Consensus 615 ~aN~~~~GL~a~i~t~d~~~a~~~~~~~~~G~v~vN~~~~~--~~~~p~g~g~~sG~~~~~~~~~g~~gl~~ft~~k~v~ 692 (716)
++|+++|||++||||+|.++++++++++++|.||||++... .+..||||.+.||+| +++|++|+++||+.|++.
T Consensus 377 ~~n~~~~gL~~~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~g----~~~g~~~~~~~t~~k~v~ 452 (453)
T cd07099 377 LANDSRYGLSASVFSRDLARAEAIARRLEAGAVSINDVLLTAGIPALPFGGVKDSGGG----RRHGAEGLREFCRPKAIA 452 (453)
T ss_pred HHhCCCCCCeEEEEcCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCCCCCCcccccCC----ccChHHHHHHhcceEEEe
Confidence 99999999999999999999999999999999999987543 467899999999875 467999999999999985
No 83
>cd07112 ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like. NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD.
Probab=100.00 E-value=2.8e-71 Score=621.97 Aligned_cols=396 Identities=19% Similarity=0.200 Sum_probs=336.9
Q ss_pred HHHhcCCcceeEEecCCccccchhhHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Q 005047 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSR--RLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQ 345 (716)
Q Consensus 268 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~ 345 (716)
.+|.+|+.++++..++ .+++++++++|++||+ .|+++|.++|.++|++++++|++|+++|++++.+|.|++.
T Consensus 7 ~~P~t~~~i~~~~~~~------~~~v~~av~~a~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~ 80 (462)
T cd07112 7 INPATGRVLAEVAACD------AADVDRAVAAARRAFESGVWSRLSPAERKAVLLRLADLIEAHRDELALLETLDMGKPI 80 (462)
T ss_pred ECCCCCCEEEEEeCCC------HHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcH
Confidence 4578899999998888 8899999999999998 4999999999999999999999999999999887765543
Q ss_pred HhchhHHHHHHhhcCHHHHHHHHHHHHHHhcccc-cccccccccccCCCeEEEEeecceeEEEEEcCC-Cch-hHHHHHH
Q 005047 346 EAGYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIAS 422 (716)
Q Consensus 346 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~-~P~-~~~~~~~ 422 (716)
. ++.. .|+...++.+++++...+ ..+...+. ..+...++.|+|+|||++|+|| ||. +.+++++
T Consensus 81 ~----~a~~-------~ev~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~GvV~~i~p~N~P~~~~~~~~~ 146 (462)
T cd07112 81 S----DALA-------VDVPSAANTFRWYAEAIDKVYGEVAPT---GPDALALITREPLGVVGAVVPWNFPLLMAAWKIA 146 (462)
T ss_pred H----HHHH-------HHHHHHHHHHHHHHHHHHHhcCceecC---CCCeEEEEEEeeeeeEEEECCCchHHHHHHHHHH
Confidence 2 2211 245555566665554322 12222211 1234567889999999999998 695 5789999
Q ss_pred HHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CchHHHhhcCCCCccEEEeecCHHHHHHHHHh
Q 005047 423 LAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKES 500 (716)
Q Consensus 423 ~ALaaGNtvv~Kps~~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~ 500 (716)
|||++||+||+|||+.+|+|+..+++++.+ + +|+|++|+|+| ++++++.|..||++|+|+||||+++|+.|++.
T Consensus 147 ~ALaaGN~Vv~Kps~~~p~~~~~l~~~~~~----aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~ 222 (462)
T cd07112 147 PALAAGNSVVLKPAEQSPLTALRLAELALE----AGLPAGVLNVVPGFGHTAGEALGLHMDVDALAFTGSTEVGRRFLEY 222 (462)
T ss_pred HHHHcCCeeeeeCCCCCCHHHHHHHHHHHh----cCCCCCcEEEEeCCCchHHHHHhcCCCcCEEEEECCHHHHHHHHHH
Confidence 999999999999999999999999999986 8 99999999996 66788889999999999999999999999886
Q ss_pred c----CCCEEEecCCcceEEEcCCC-CHHHHHHHHHHhcCCCCC-ccccccceEEEeCccCChhhHHHHHHHHHhcCC--
Q 005047 501 T----KIPVLGHADGICHVYVDKSA-NLDVAKNIVIDAKIDYPA-ACNAMVETLLVHKDLACNGALNELVVELQHEGV-- 572 (716)
Q Consensus 501 a----~~~~~lElGGk~p~iV~~dA-Dl~~Aa~~iv~~~f~n~g-~C~a~~~rv~V~~~i~dd~f~~~l~~~~~~~~~-- 572 (716)
+ .||+++|||||||+||++|| |+|.|++.+++|+|.|+| .|+|+ +|+|||+++| |+|+++|+++++++.+
T Consensus 223 aa~~~~~~~~lelgG~n~~iV~~da~dl~~aa~~i~~~~~~~~GQ~C~a~-~~v~V~~~v~-~~f~~~l~~~~~~~~~g~ 300 (462)
T cd07112 223 SGQSNLKRVWLECGGKSPNIVFADAPDLDAAAEAAAAGIFWNQGEVCSAG-SRLLVHESIK-DEFLEKVVAAAREWKPGD 300 (462)
T ss_pred HHHhcCCEEEecCCCCCeEEECCCCcCHHHHHHHHHHHHHhccCCCCCCC-eeEEEcHHHH-HHHHHHHHHHHhcCCcCC
Confidence 5 38999999999999999999 999999999999999976 99999 9999999999 7999999999876521
Q ss_pred --------------------------------EE-ecCccc----cc-cc-c-C-----CCCccccccccCceEEEEEeC
Q 005047 573 --------------------------------GL-FGGPRA----SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVD 607 (716)
Q Consensus 573 --------------------------------~~-~g~~~~----~~-~~-p-v-----~~~~~~~eE~FGPVl~v~~~~ 607 (716)
++ .|+... .+ ++ | | +++++++||+||||++|++|+
T Consensus 301 p~~~~~~~gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~ 380 (462)
T cd07112 301 PLDPATRMGALVSEAHFDKVLGYIESGKAEGARLVAGGKRVLTETGGFFVEPTVFDGVTPDMRIAREEIFGPVLSVITFD 380 (462)
T ss_pred CCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCCeEEeeEEecCCCCCChHHhCCCCCceEEEEEeC
Confidence 22 233321 13 33 5 2 368999999999999999999
Q ss_pred CHHHHHHHHHhcCCCceeEEEccCHHHHHHHHHccCcceEEEcCCcCCCCCCcccCcceeeccccccccccccchhcccE
Q 005047 608 DVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLT 687 (716)
Q Consensus 608 ~~deAi~~aN~~~~GL~a~i~t~d~~~a~~~~~~~~~G~v~vN~~~~~~~~~p~g~g~~sG~~~~~~~~~g~~gl~~ft~ 687 (716)
|+||||+++|+++|||++||||+|.+++.++++++++|+|+||++....+..||||.+.||+| +++|++|+++||+
T Consensus 381 ~~~eai~~~n~~~~gL~~~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~PfgG~k~SG~G----~~~g~~~~~~f~~ 456 (462)
T cd07112 381 SEEEAVALANDSVYGLAASVWTSDLSRAHRVARRLRAGTVWVNCFDEGDITTPFGGFKQSGNG----RDKSLHALDKYTE 456 (462)
T ss_pred CHHHHHHHHhCCCccceEEEEcCCHHHHHHHHHhcCcceEEECCCCCCCCCCCCCCcccccCC----ccchHHHHHHHhc
Confidence 999999999999999999999999999999999999999999997766677899999999986 3569999999999
Q ss_pred EEEEEE
Q 005047 688 TRWILR 693 (716)
Q Consensus 688 ~k~v~~ 693 (716)
.|+|++
T Consensus 457 ~k~i~~ 462 (462)
T cd07112 457 LKTTWI 462 (462)
T ss_pred eeEEEC
Confidence 999853
No 84
>cd07092 ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like. NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency.
Probab=100.00 E-value=4.1e-71 Score=620.52 Aligned_cols=396 Identities=17% Similarity=0.199 Sum_probs=337.6
Q ss_pred HHHhcCCcceeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHh
Q 005047 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 347 (716)
Q Consensus 268 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~ 347 (716)
.+|.||+.++++..++ .+|+++++++|++||+.|++++.++|.++|++++++|++++++|++++.+|.+++..
T Consensus 2 ~~P~t~~~i~~~~~~~------~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~~~~l~~~~~~l~~~~~~e~Gk~~~- 74 (450)
T cd07092 2 VDPATGEEIATVPDAS------AADVDAAVAAAHAAFPSWRRTTPAERSKALLKLADAIEENAEELAALESRNTGKPLH- 74 (450)
T ss_pred cCCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHH-
Confidence 3578999999998888 889999999999999999999999999999999999999999999998877654321
Q ss_pred chhHHHHHHhhcCHHHHHHHHHHHHHHhcccccc-cccccccccCCCeEEEEeecceeEEEEEcCC-Cch-hHHHHHHHH
Q 005047 348 GYAKSLVSRLALKPGKISSLAKSIRILADMEEPI-GQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 424 (716)
Q Consensus 348 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~-~P~-~~~~~~~~A 424 (716)
++. ..|+..+++.+++++...+.. +...+. . ..+...+..|+|+|||++|+|| ||. +.++++++|
T Consensus 75 ---~~~-------~~ev~~~i~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~A 142 (450)
T cd07092 75 ---LVR-------DDELPGAVDNFRFFAGAARTLEGPAAGE-Y-LPGHTSMIRREPIGVVAQIAPWNYPLMMAAWKIAPA 142 (450)
T ss_pred ---HHH-------HHHHHHHHHHHHHHHHHHHHhcCcccCc-c-CCCceeEEEEeccceEEEECCCCcHHHHHHHHHHHH
Confidence 111 235667777777776543322 211111 1 1233567889999999999998 796 468999999
Q ss_pred HHhCCEEEEeCCcchHHHHHHHHHHHHHhcccccCcCceEEecC-CchHHHhhcCCCCccEEEeecCHHHHHHHHHhcC-
Q 005047 425 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDTVGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK- 502 (716)
Q Consensus 425 LaaGNtvv~Kps~~tp~t~~~l~~l~~~al~~alP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a~- 502 (716)
|++||+||+|||+.||+++.+|.+++++ .+|+|++|+|++ ++++++.|..||++|+|+||||+.+|+.|++++.
T Consensus 143 L~aGN~VIlKps~~~~~~~~~l~~~~~~----glP~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~v~~~a~~ 218 (450)
T cd07092 143 LAAGNTVVLKPSETTPLTTLLLAELAAE----VLPPGVVNVVCGGGASAGDALVAHPRVRMVSLTGSVRTGKKVARAAAD 218 (450)
T ss_pred HHcCCEEEEECCccchHHHHHHHHHHHh----cCCcccEEEeecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhh
Confidence 9999999999999999999999999975 599999999996 4557888888999999999999999999998873
Q ss_pred --CCEEEecCCcceEEEcCCCCHHHHHHHHHHhcCCCCC-ccccccceEEEeCccCChhhHHHHHHHHHhcCC-------
Q 005047 503 --IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMVETLLVHKDLACNGALNELVVELQHEGV------- 572 (716)
Q Consensus 503 --~~~~lElGGk~p~iV~~dADl~~Aa~~iv~~~f~n~g-~C~a~~~rv~V~~~i~dd~f~~~l~~~~~~~~~------- 572 (716)
+|+++|||||||+||++|||+|.|++.+++|+|.|+| .|+++ +|+|||+++| |+|+++|+++++++++
T Consensus 219 ~~~~~~lelgG~~p~iV~~dAdl~~aa~~iv~~~~~~~GQ~C~a~-~~v~V~~~i~-~~f~~~l~~~~~~~~~g~p~~~~ 296 (450)
T cd07092 219 TLKRVHLELGGKAPVIVFDDADLDAAVAGIATAGYYNAGQDCTAA-CRVYVHESVY-DEFVAALVEAVSAIRVGDPDDED 296 (450)
T ss_pred cCCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhhCCCCCCCC-cEEEEeHHHH-HHHHHHHHHHHhhCCcCCCCCCC
Confidence 8999999999999999999999999999999999986 99999 9999999999 7999999999987632
Q ss_pred --------------------------EE-ecCccc--cc-cc-c-C-----CCCccccccccCceEEEEEeCCHHHHHHH
Q 005047 573 --------------------------GL-FGGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDH 615 (716)
Q Consensus 573 --------------------------~~-~g~~~~--~~-~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~ 615 (716)
++ .|+... .+ ++ | | +++++++||+||||++|++|+|+||||++
T Consensus 297 ~~~gpli~~~~~~~i~~~i~~a~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~ 376 (450)
T cd07092 297 TEMGPLNSAAQRERVAGFVERAPAHARVLTGGRRAEGPGYFYEPTVVAGVAQDDEIVQEEIFGPVVTVQPFDDEDEAIEL 376 (450)
T ss_pred CccCcccCHHHHHHHHHHHHHHHcCCEEEeCCCCCCCCccEEeeEEEEcCCCCChHHhCCCcCceEEEEEECCHHHHHHH
Confidence 11 122211 12 33 5 2 36899999999999999999999999999
Q ss_pred HHhcCCCceeEEEccCHHHHHHHHHccCcceEEEcCCcCCCCCCcccCcceeeccccccccccccchhcccEEEEEE
Q 005047 616 IHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 692 (716)
Q Consensus 616 aN~~~~GL~a~i~t~d~~~a~~~~~~~~~G~v~vN~~~~~~~~~p~g~g~~sG~~~~~~~~~g~~gl~~ft~~k~v~ 692 (716)
+|+++|||++||||+|.++++++++++++|.|+||++....+.+||||.+.||+| +++|++|+++||+.|+|+
T Consensus 377 ~n~~~~gL~~~vft~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~PfgG~~~SG~G----~~~g~~~~~~~~~~k~~~ 449 (450)
T cd07092 377 ANDVEYGLASSVWTRDVGRAMRLSARLDFGTVWVNTHIPLAAEMPHGGFKQSGYG----KDLSIYALEDYTRIKHVM 449 (450)
T ss_pred HhCCCCCceEEEECCCHHHHHHHHHhcCccEEEECCCCCCCCCCCcCCcccCcCC----CCChHHHHHHHheeeEEe
Confidence 9999999999999999999999999999999999988777778999999999986 356999999999999985
No 85
>TIGR01722 MMSDH methylmalonic acid semialdehyde dehydrogenase. In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus.
Probab=100.00 E-value=7.3e-71 Score=621.07 Aligned_cols=399 Identities=15% Similarity=0.133 Sum_probs=337.0
Q ss_pred HHHHhcCCcceeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Q 005047 267 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 346 (716)
Q Consensus 267 l~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~ 346 (716)
+.+|.||+.++++..++ .+++++++++|++||+.|+++|.++|.++|++++++|++++++|++++..|.+++.
T Consensus 20 ~~~P~t~~~i~~~~~~~------~~~v~~ai~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~- 92 (477)
T TIGR01722 20 VTNPATNEVTTKVAFAS------VDEVDAAVASARETFLTWGQTSLAQRTSVLLRYQALLKEHRDEIAELITAEHGKTH- 92 (477)
T ss_pred eeCCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCH-
Confidence 36688999999999888 89999999999999999999999999999999999999999999999876655432
Q ss_pred hchhHHHHHHhhcCHHHHHHHHHHHHHHhccccc-ccccccccccCCCeEEEEeecceeEEEEEcCC-Cch-hHHHHHHH
Q 005047 347 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 423 (716)
Q Consensus 347 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~-~P~-~~~~~~~~ 423 (716)
.++ ..|+...++.+++++...+. .+...+. ...+...+.+++|+|||++|+|| ||. +.++++++
T Consensus 93 ---~~a--------~~ev~~~i~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ 159 (477)
T TIGR01722 93 ---SDA--------LGDVARGLEVVEHACGVNSLLKGETSTQ--VATRVDVYSIRQPLGVCAGITPFNFPAMIPLWMFPI 159 (477)
T ss_pred ---HHH--------HHHHHHHHHHHHHHHHHHHHhcCccccc--CCCCceEEEEEcccceEEEEccCChHHHHHHHHHHH
Confidence 122 23666677777766543322 2322221 11234567789999999999998 696 46799999
Q ss_pred HHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecCCchHHHhhcCCCCccEEEeecCHHHHHHHHHhc-
Q 005047 424 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST- 501 (716)
Q Consensus 424 ALaaGNtvv~Kps~~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a- 501 (716)
||++||+||+|||++||+++..+++++++ + +|+|++|+|+|+.+.+..|..||+|++|+||||+++|+.|++.+
T Consensus 160 ALaaGN~VilKps~~~p~~~~~l~~~l~~----aglP~g~~~~v~g~~~~~~~L~~~~~v~~V~ftGS~~~g~~v~~~a~ 235 (477)
T TIGR01722 160 AIACGNTFVLKPSEKVPSAAVKLAELFSE----AGAPDGVLNVVHGDKEAVDRLLEHPDVKAVSFVGSTPIGRYIHTTGS 235 (477)
T ss_pred HHhcCCEEEeeCcccChHHHHHHHHHHHH----hCcCCCeEEEEeCCHHHHHHHHcCCCcCEEEEECCHHHHHHHHHHHH
Confidence 99999999999999999999999999986 7 99999999997555667778899999999999999999998876
Q ss_pred --CCCEEEecCCcceEEEcCCCCHHHHHHHHHHhcCCCCC-ccccccceEEEeCccCChhhHHHHHHHHHhcC-------
Q 005047 502 --KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMVETLLVHKDLACNGALNELVVELQHEG------- 571 (716)
Q Consensus 502 --~~~~~lElGGk~p~iV~~dADl~~Aa~~iv~~~f~n~g-~C~a~~~rv~V~~~i~dd~f~~~l~~~~~~~~------- 571 (716)
.||+++|||||||+||++|||+|.|++.+++++|.|+| .|+++ +|+|||+++ | +|+++|+++++++.
T Consensus 236 ~~~~~v~lElGG~n~~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~-~rl~v~~~~-~-~f~~~l~~~~~~~~~G~~~~~ 312 (477)
T TIGR01722 236 AHGKRVQALGGAKNHMVVMPDADKDAAADALVGAAYGAAGQRCMAI-SAAVLVGAA-D-EWVPEIRERAEKIRIGPGDDP 312 (477)
T ss_pred hcCCeEEEECCCCCceEECCCCCHHHHHHHHHHHHHHhcCCCCCCC-eEEEEeCcH-H-HHHHHHHHHHhcCCCCCCCCC
Confidence 38999999999999999999999999999999999976 99999 999999998 5 99999999987652
Q ss_pred ---------------------------CEEe-cCccc------ccc-c-c-C-----CCCccccccccCceEEEEEeCCH
Q 005047 572 ---------------------------VGLF-GGPRA------SKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVDDV 609 (716)
Q Consensus 572 ---------------------------~~~~-g~~~~------~~~-~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~ 609 (716)
++++ |+... .++ + | | +++.+++||+||||++|++|+|+
T Consensus 313 ~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~il~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~V~~~~~~ 392 (477)
T TIGR01722 313 GAEMGPLITPQAKDRVASLIAGGAAEGAEVLLDGRGYKVDGYEEGNWVGPTLLERVPPTMKAYQEEIFGPVLCVLEADTL 392 (477)
T ss_pred CCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCCCeEECCEEeeCCCCCChhhhCCCCCCeEEEEEeCCH
Confidence 2232 33221 122 3 6 2 35899999999999999999999
Q ss_pred HHHHHHHHhcCCCceeEEEccCHHHHHHHHHccCcceEEEcCCcCCC-CCCcccCcceeeccccccccccccchhcccEE
Q 005047 610 RAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFC-DGARFGLGAEVGISTSRIHARGPVGVEGLLTT 688 (716)
Q Consensus 610 deAi~~aN~~~~GL~a~i~t~d~~~a~~~~~~~~~G~v~vN~~~~~~-~~~p~g~g~~sG~~~~~~~~~g~~gl~~ft~~ 688 (716)
||||+++|+++|||++||||+|.+++++|++++++|.||||++.... +.+||||.+.||+| +.+++|++|+++||+.
T Consensus 393 ~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~k~SG~G--~~~~~g~~~l~~~~~~ 470 (477)
T TIGR01722 393 EEAIALINASPYGNGTAIFTRDGAAARRFQHEIEVGQVGVNVPIPVPLPYFSFTGWKDSFFG--DHHIYGKQGTHFYTRG 470 (477)
T ss_pred HHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCCCCccccccCC--CCccChHHHHHHhcCe
Confidence 99999999999999999999999999999999999999999865443 56899999999986 3335689999999999
Q ss_pred EEEEEc
Q 005047 689 RWILRG 694 (716)
Q Consensus 689 k~v~~~ 694 (716)
|+++++
T Consensus 471 k~i~~~ 476 (477)
T TIGR01722 471 KTVTTR 476 (477)
T ss_pred eEEEEe
Confidence 999875
No 86
>cd07111 ALDH_F16 Aldehyde dehydrogenase family 16A1-like. Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence.
Probab=100.00 E-value=3.1e-71 Score=621.96 Aligned_cols=385 Identities=19% Similarity=0.221 Sum_probs=330.4
Q ss_pred HHHHhcCCcceeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Q 005047 267 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 346 (716)
Q Consensus 267 l~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~ 346 (716)
+.+|.+|+.++++..++ .+++++++++|++||+.|+++|.++|.++|++++++|++++++|++++++|.++...
T Consensus 41 ~~nP~t~~~i~~~~~a~------~~~v~~ai~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ 114 (480)
T cd07111 41 TINPATGEVLASVLQAE------EEDVDAAVAAARTAFESWSALPGHVRARHLYRIARHIQKHQRLFAVLESLDNGKPIR 114 (480)
T ss_pred eECCCCCCEEEEEcCCC------HHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH
Confidence 36788999999998888 889999999999999999999999999999999999999999999988877654321
Q ss_pred hchhHHHHHHhhcCHHHHHHHHHHHHHHhcccccccccccccccCCCeEEEEeecceeEEEEEcCC-Cch-hHHHHHHHH
Q 005047 347 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 424 (716)
Q Consensus 347 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~-~P~-~~~~~~~~A 424 (716)
++.. .++...++.+++++.+.+... + .+..++|+|||++|+|| ||. +.++++++|
T Consensus 115 ----~a~~-------~ev~~~~~~~~~~~~~~~~~~----------~--~~~~~~P~GVV~~I~PwN~P~~~~~~~i~~A 171 (480)
T cd07111 115 ----ESRD-------CDIPLVARHFYHHAGWAQLLD----------T--ELAGWKPVGVVGQIVPWNFPLLMLAWKICPA 171 (480)
T ss_pred ----HHHH-------HHHHHHHHHHHHHHHHHHHhc----------C--CcccceecceEEEECCCccHHHHHHHHHHHH
Confidence 2211 245566666666554332110 1 12457999999999998 696 568999999
Q ss_pred HHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecCCchHHHhhcCCCCccEEEeecCHHHHHHHHHhc--
Q 005047 425 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST-- 501 (716)
Q Consensus 425 LaaGNtvv~Kps~~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a-- 501 (716)
|++||+||+|||+.||+++..|++++.+ + ||+|++|+|+|..+++..|..||+||+|+||||+.+|+.|++.+
T Consensus 172 LaaGN~VVlKps~~tp~~~~~l~~~~~~----aGlP~gvv~~v~g~~~~~~~l~~~~~v~~v~ftGs~~~g~~v~~~aa~ 247 (480)
T cd07111 172 LAMGNTVVLKPAEYTPLTALLFAEICAE----AGLPPGVLNIVTGNGSFGSALANHPGVDKVAFTGSTEVGRALRRATAG 247 (480)
T ss_pred HHcCCEEEEECCCCChHHHHHHHHHHHh----cCCCcccEEEEeCCchHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhc
Confidence 9999999999999999999999999986 8 99999999997556788888999999999999999999999877
Q ss_pred -CCCEEEecCCcceEEEcCCCCHHHHHHHHHHhcCCCCC-ccccccceEEEeCccCChhhHHHHHHHHHhcCC-------
Q 005047 502 -KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMVETLLVHKDLACNGALNELVVELQHEGV------- 572 (716)
Q Consensus 502 -~~~~~lElGGk~p~iV~~dADl~~Aa~~iv~~~f~n~g-~C~a~~~rv~V~~~i~dd~f~~~l~~~~~~~~~------- 572 (716)
.+|+++|||||||+||++|||+|.|++.+++|+|.|+| .|+++ +|+|||+++| |+|+++|+++++++++
T Consensus 248 ~~~~~~lElGGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~a~-~ri~V~~~i~-d~f~~~l~~~~~~~~vg~p~~~~ 325 (480)
T cd07111 248 TGKKLSLELGGKSPFIVFDDADLDSAVEGIVDAIWFNQGQVCCAG-SRLLVQESVA-EELIRKLKERMSHLRVGDPLDKA 325 (480)
T ss_pred cCCcEEEEcCCCceEEECCCCCHHHHHHHHHHHHHhcCCCcCcCC-ceEEEcHHHH-HHHHHHHHHHHHhcCCCCCCCCC
Confidence 38999999999999999999999999999999999976 99999 9999999999 7999999999887632
Q ss_pred ---------------------------EEe-cCcc--cccc-c-c-C-----CCCccccccccCceEEEEEeCCHHHHHH
Q 005047 573 ---------------------------GLF-GGPR--ASKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAID 614 (716)
Q Consensus 573 ---------------------------~~~-g~~~--~~~~-~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi~ 614 (716)
+++ |+.. ..++ + | | +++++++||+||||++|++|+|+||||+
T Consensus 326 ~~~gpli~~~~~~~v~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~deai~ 405 (480)
T cd07111 326 IDMGAIVDPAQLKRIRELVEEGRAEGADVFQPGADLPSKGPFYPPTLFTNVPPASRIAQEEIFGPVLVVLTFRTAKEAVA 405 (480)
T ss_pred CccccccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEeeEEEecCCCCChhhcCCCCCCeeEeecCCCHHHHHH
Confidence 111 2211 1122 3 5 2 3588999999999999999999999999
Q ss_pred HHHhcCCCceeEEEccCHHHHHHHHHccCcceEEEcCCcCCCCCCcccCcceeeccccccccccccchhcccEEEE
Q 005047 615 HIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRW 690 (716)
Q Consensus 615 ~aN~~~~GL~a~i~t~d~~~a~~~~~~~~~G~v~vN~~~~~~~~~p~g~g~~sG~~~~~~~~~g~~gl~~ft~~k~ 690 (716)
++|+++|||++||||+|.+++.++++++++|+|+||++....+..||||.+.||+| +++|++|+++||+.|+
T Consensus 406 ~~n~~~~gL~~~i~t~d~~~~~~~~~~l~aG~v~iN~~~~~~~~~PfGG~k~SG~G----~~~g~~~~~~~~~~k~ 477 (480)
T cd07111 406 LANNTPYGLAASVWSENLSLALEVALSLKAGVVWINGHNLFDAAAGFGGYRESGFG----REGGKEGLYEYLRPSW 477 (480)
T ss_pred HHhCCCCCceEEEEcCCHHHHHHHHHhCCEeeEEECCCCCCCCCCCcCCcccccCC----ccchHHHHHHHhhccC
Confidence 99999999999999999999999999999999999998776677899999999986 3579999999999885
No 87
>cd07137 ALDH_F3FHI Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins. Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress.
Probab=100.00 E-value=8.7e-71 Score=611.08 Aligned_cols=375 Identities=21% Similarity=0.243 Sum_probs=310.6
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhchhHHHHHHhhcCHHHHHHHHHHHHHH
Q 005047 295 EMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRIL 374 (716)
Q Consensus 295 ~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (716)
+++++|++||+.|+.++..+|.++|++++++|++++|+|++++++|+++.. .++... |+..+++.++++
T Consensus 3 ~a~~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~----~~a~~~-------ev~~~~~~~~~~ 71 (432)
T cd07137 3 RLVRELRETFRSGRTRSAEWRKSQLKGLLRLVDENEDDIFAALRQDLGKPS----AESFRD-------EVSVLVSSCKLA 71 (432)
T ss_pred HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCH----HHHHHH-------HHHHHHHHHHHH
Confidence 589999999999999999999999999999999999999999998876543 233222 344444444444
Q ss_pred hccccc-ccc---cccccccCCCeEEEEeecceeEEEEEcCC-Cch-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHH
Q 005047 375 ADMEEP-IGQ---ILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHK 448 (716)
Q Consensus 375 ~~~~~~-~g~---~~~~~~~~~~~~~~~~~~PlGVv~~I~p~-~P~-~~~~~~~~ALaaGNtvv~Kps~~tp~t~~~l~~ 448 (716)
+..... .+. ..+.. ......+++|+|+|||++|+|| ||. +.++++++||++||+||+|||+.||+|+.++++
T Consensus 72 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~r~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~tp~~~~~l~~ 149 (432)
T cd07137 72 IKELKKWMAPEKVKTPLT--TFPAKAEIVSEPLGVVLVISAWNFPFLLSLEPVIGAIAAGNAVVLKPSELAPATSALLAK 149 (432)
T ss_pred HHHHHHHhCCcccCCCcc--cCCceeEEEEecCcEEEEEcCCchHHHHHHHHHHHHHhcCCEEEEECCCcChHHHHHHHH
Confidence 332111 111 01110 1122457789999999999998 696 578999999999999999999999999999999
Q ss_pred HHHHhcccccCcCceEEecCCchHHHhhcCCCCccEEEeecCHHHHHHHHHhc---CCCEEEecCCcceEEEcCCCCHHH
Q 005047 449 VITSAIPDTVGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST---KIPVLGHADGICHVYVDKSANLDV 525 (716)
Q Consensus 449 l~~~al~~alP~gvv~vv~~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a---~~~~~lElGGk~p~iV~~dADl~~ 525 (716)
++.+ ++|+|++|+|+|+.+.++.|..| .+|+|+||||+++|+.|++.+ .+|+++|||||||+||++|||+|.
T Consensus 150 ~~~~----~~P~gvv~~v~g~~~~~~~L~~~-~i~~v~fTGs~~~g~~v~~~aa~~~~~~~lElgG~np~iV~~dAdl~~ 224 (432)
T cd07137 150 LIPE----YLDTKAIKVIEGGVPETTALLEQ-KWDKIFFTGSPRVGRIIMAAAAKHLTPVTLELGGKCPVIVDSTVDLKV 224 (432)
T ss_pred HHHH----hCCcCeEEEEeCCHHHHHHHHhC-CCCEEEEECChHHHHHHHHHHHhcCCcEEEEccCCCcEEEcCCCCHHH
Confidence 9986 59999999999755566666666 599999999999999998887 399999999999999999999999
Q ss_pred HHHHHHHhcC-CCCC-ccccccceEEEeCccCChhhHHHHHHHHHhcCC-------------------------------
Q 005047 526 AKNIVIDAKI-DYPA-ACNAMVETLLVHKDLACNGALNELVVELQHEGV------------------------------- 572 (716)
Q Consensus 526 Aa~~iv~~~f-~n~g-~C~a~~~rv~V~~~i~dd~f~~~l~~~~~~~~~------------------------------- 572 (716)
|++.+++|+| .|+| .|+|+ +|+|||+++| |+|+++|+++++++..
T Consensus 225 aa~~i~~~~f~~~~GQ~C~a~-~rv~V~~~i~-d~f~~~l~~~~~~~~~g~p~~~~~~gpli~~~~~~~v~~~i~~a~~g 302 (432)
T cd07137 225 AVRRIAGGKWGCNNGQACIAP-DYVLVEESFA-PTLIDALKNTLEKFFGENPKESKDLSRIVNSHHFQRLSRLLDDPSVA 302 (432)
T ss_pred HHHHHHHHhhhccCCCcccCC-CEEEEcHHHH-HHHHHHHHHHHHHHhCCCCCccCCcCCcCCHHHHHHHHHHHHHHHhC
Confidence 9999999999 4776 99999 9999999999 7999999998887521
Q ss_pred -EE-ecCccc-ccc-c-c-C-----CCCccccccccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEccCHHHHHHHHHc
Q 005047 573 -GL-FGGPRA-SKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQ 641 (716)
Q Consensus 573 -~~-~g~~~~-~~~-~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~i~t~d~~~a~~~~~~ 641 (716)
.+ .|+... .++ + | | ++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++++++
T Consensus 303 a~~l~gg~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~N~~~~gL~a~v~t~d~~~a~~~~~~ 382 (432)
T cd07137 303 DKIVHGGERDEKNLYIEPTILLDPPLDSSIMTEEIFGPLLPIITVKKIEESIEIINSRPKPLAAYVFTKNKELKRRIVAE 382 (432)
T ss_pred CeEEeCCCcCCCCCEEeeEEEecCCCcchhhhcccccCceEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHh
Confidence 11 233221 233 3 5 2 3689999999999999999999999999999999999999999999999999999
Q ss_pred cCcceEEEcCCcCC--CCCCcccCcceeeccccccccccccchhcccEEEEEEE
Q 005047 642 VDSAAVFHNASTRF--CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILR 693 (716)
Q Consensus 642 ~~~G~v~vN~~~~~--~~~~p~g~g~~sG~~~~~~~~~g~~gl~~ft~~k~v~~ 693 (716)
+++|.|+||++... .+.+||||.+.||+| +++|.+++++||+.|+|++
T Consensus 383 l~~G~v~iN~~~~~~~~~~~PfGG~k~SG~G----~~~g~~~l~~f~~~k~v~~ 432 (432)
T cd07137 383 TSSGGVTFNDTVVQYAIDTLPFGGVGESGFG----AYHGKFSFDAFSHKKAVLY 432 (432)
T ss_pred CCcCcEEECCccccccCCCCCCCCcCcCcCC----ccccHHHHHHhccCceeeC
Confidence 99999999987543 367899999999986 3568999999999999864
No 88
>cd07121 ALDH_EutE Ethanolamine utilization protein EutE-like. Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), converts acetaldehyde into acetyl-CoA. This CD is limited to such monofunctional enzymes as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium. Mutations in eutE abolish the ability to utilize ethanolamine as a carbon source.
Probab=100.00 E-value=5.4e-71 Score=610.50 Aligned_cols=372 Identities=17% Similarity=0.206 Sum_probs=301.7
Q ss_pred hhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhchhHHHHHHhhcCHHHHHHHHH
Q 005047 290 QVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAK 369 (716)
Q Consensus 290 ~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 369 (716)
-+|+++|+++|++||+.|+++|.++|.++|++++++|++|.++|++++.+|.+++. .++. +.
T Consensus 3 ~~~v~~av~~A~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~----~~~~--------------~~ 64 (429)
T cd07121 3 FATVDDAVAAAKAAQKQYRKCTLADREKIIEAIREALLSNAEELAEMAVEETGMGR----VEDK--------------IA 64 (429)
T ss_pred hhhHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH----HHHH--------------HH
Confidence 46999999999999999999999999999999999999999999999877655432 1111 11
Q ss_pred HHHHHhccccccccc-c-cccccCCCeEEEEeecceeEEEEEcCC-Cch-hHHHHHHHHHHhCCEEEEeCCcchHHHHHH
Q 005047 370 SIRILADMEEPIGQI-L-KRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAI 445 (716)
Q Consensus 370 ~~~~~~~~~~~~g~~-~-~~~~~~~~~~~~~~~~PlGVv~~I~p~-~P~-~~~~~~~~ALaaGNtvv~Kps~~tp~t~~~ 445 (716)
.+++++... .+.. . +......+...+++|+|+|||++|+|| ||. +.++++++||++||+||+||||.||+|+.+
T Consensus 65 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKpse~tp~t~~~ 142 (429)
T cd07121 65 KNHLAAEKT--PGTEDLTTTAWSGDNGLTLVEYAPFGVIGAITPSTNPTETIINNSISMLAAGNAVVFNPHPGAKKVSAY 142 (429)
T ss_pred HHHHHHHhc--CcccccccccccCCCcceEEEEcccceEEEEccCCCchhHHHHHHHHHHHcCCCEEEECCccchhHHHH
Confidence 222222110 0100 0 000001122357788999999999999 795 578999999999999999999999999999
Q ss_pred HHHHHHHhcccc-cCcCceEEecC-CchHHHhhcCCCCccEEEeecCHHHHHHHHHhcCCCEEEecCCcceEEEcCCCCH
Q 005047 446 LHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANL 523 (716)
Q Consensus 446 l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a~~~~~lElGGk~p~iV~~dADl 523 (716)
+++++++++.++ +|+|++|+|++ +.++++.|..||+||+|+||||+++|+.|++. .+|+++|||||||+||++||||
T Consensus 143 l~~l~~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~I~fTGs~~~g~~v~~~-~k~~~lelGGk~p~iV~~dADl 221 (429)
T cd07121 143 AVELINKAIAEAGGPDNLVVTVEEPTIETTNELMAHPDINLLVVTGGPAVVKAALSS-GKKAIGAGAGNPPVVVDETADI 221 (429)
T ss_pred HHHHHHHHHHHcCCCcceEEEecCCChHHHHHHHcCCCccEEEeeCCHHHHHHHHhC-CCceEeecCCCceEEEecCCCH
Confidence 999999888889 99999999996 55678888889999999999999999999886 5999999999999999999999
Q ss_pred HHHHHHHHHhcCCCCC-ccccccceEEEeCccCChhhHHHHHHHHHhc----------------------CCEE-ecCcc
Q 005047 524 DVAKNIVIDAKIDYPA-ACNAMVETLLVHKDLACNGALNELVVELQHE----------------------GVGL-FGGPR 579 (716)
Q Consensus 524 ~~Aa~~iv~~~f~n~g-~C~a~~~rv~V~~~i~dd~f~~~l~~~~~~~----------------------~~~~-~g~~~ 579 (716)
|+|++.+++|+|.|+| +|+|+ +|+|||++|| |+|+++|+++ ..+ |.++ .|+..
T Consensus 222 d~Aa~~i~~~~~~n~GQ~C~a~-~rv~V~~~i~-d~f~~~L~~~-~~~~i~~~~~~~v~~~i~~a~~~~~ga~~~~gg~~ 298 (429)
T cd07121 222 EKAARDIVQGASFDNNLPCIAE-KEVIAVDSVA-DYLIAAMQRN-GAYVLNDEQAEQLLEVVLLTNKGATPNKKWVGKDA 298 (429)
T ss_pred HHHHHHHHhcccccCCCCCCcc-ceEEEeHHHH-HHHHHHHHHC-CCEEcCHHHHHHHHHhhcccCCCccccccccCcCH
Confidence 9999999999999987 99999 9999999999 7999999876 211 0111 12211
Q ss_pred --c---cccc-----c-C-----CCCccccccccCceEEEEEeCCHHHHHHHHHhcCCCc--eeEEEccCHHHHHHHHHc
Q 005047 580 --A---SKLL-----Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAH--TDCIVAEDQKVAETFLCQ 641 (716)
Q Consensus 580 --~---~~~~-----p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL--~a~i~t~d~~~a~~~~~~ 641 (716)
. .+++ | | ++|++++||+||||++|++|+|+||||+++|+++||| ++||||+|.+++++|+++
T Consensus 299 ~~~~~~~G~~~~~~~ptil~~v~~~~~i~~eE~FgPVl~v~~~~~~~eAi~~an~~~~GLghsa~I~t~d~~~a~~~a~~ 378 (429)
T cd07121 299 SKILKAAGIEVPADIRLIIVETDKDHPFVVEEQMMPILPVVRVKNFDEAIELAVELEHGNRHTAIIHSKNVENLTKMARA 378 (429)
T ss_pred HHHHHHcCCCCCCCCeEEEEecCCCCCccccccccceEEEEEeCCHHHHHHHHHhhccCCCceEEEecCCHHHHHHHHhh
Confidence 0 1222 3 2 3689999999999999999999999999999999999 999999999999999999
Q ss_pred cCcceEEEcCCcCCCCCCcccCcceeeccccccccccccchhcccEEEEEEE
Q 005047 642 VDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILR 693 (716)
Q Consensus 642 ~~~G~v~vN~~~~~~~~~p~g~g~~sG~~~~~~~~~g~~gl~~ft~~k~v~~ 693 (716)
+++|+||||.++. ..+||||.+.|+.+- +|+.| +..+..|++..
T Consensus 379 l~aG~v~iN~~~~--~~~p~gG~k~s~~~~-----~~~~~-~~~~~~~~~~~ 422 (429)
T cd07121 379 MQTTIFVKNGPSY--AGLGVGGEGYTTFTI-----AGPTG-EGLTSARTFTR 422 (429)
T ss_pred CCceEEEEcCCCc--CccccCCCccceEEe-----cCCcC-cCccChhhhhe
Confidence 9999999998754 568999988887732 24555 55566666543
No 89
>PF00171 Aldedh: Aldehyde dehydrogenase family; InterPro: IPR015590 Aldehyde dehydrogenases (1.2.1.3 from EC and 1.2.1.5 from EC) are enzymes that oxidize a wide variety of aliphatic and aromatic aldehydes using NADP as a cofactor. In mammals at least four different forms of the enzyme are known []: class-1 (or Ald C) a tetrameric cytosolic enzyme, class-2 (or Ald M) a tetrameric mitochondrial enzyme, class- 3 (or Ald D) a dimeric cytosolic enzyme, and class IV a microsomal enzyme. Aldehyde dehydrogenases have also been sequenced from fungal and bacterial species. A number of enzymes are known to be evolutionary related to aldehyde dehydrogenases. A glutamic acid and a cysteine residue have been implicated in the catalytic activity of mammalian aldehyde dehydrogenase. These residues are conserved in all the enzymes of this entry. Some of the proteins in this entry are allergens. Allergies are hypersensitivity reactions of the immune system to specific substances called allergens (such as pollen, stings, drugs, or food) that, in most people, result in no symptoms. A nomenclature system has been established for antigens (allergens) that cause IgE-mediated atopic allergies in humans [WHO/IUIS Allergen Nomenclature Subcommittee King T.P., Hoffmann D., Loewenstein H., Marsh D.G., Platts-Mills T.A.E., Thomas W. Bull. World Health Organ. 72:797-806(1994)]. This nomenclature system is defined by a designation that is composed of the first three letters of the genus; a space; the first letter of the species name; a space and an arabic number. In the event that two species names have identical designations, they are discriminated from one another by adding one or more letters (as necessary) to each species designation. The allergens in this family include allergens with the following designations: Alt a 10 and Cla h 3.; GO: 0016491 oxidoreductase activity, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 3R31_A 3HAZ_A 1UXQ_A 1UXP_A 1UXR_A 1UXU_A 1UXN_A 1KY8_A 1UXT_A 1UXV_A ....
Probab=100.00 E-value=2.3e-71 Score=623.97 Aligned_cols=393 Identities=22% Similarity=0.287 Sum_probs=335.7
Q ss_pred HHHhcCCcceeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHh
Q 005047 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 347 (716)
Q Consensus 268 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~ 347 (716)
.+|.+|+.++++..++ .+++++++++|++||+.|+.++..+|.++|++++++|++|.++|++++.+|.+++.
T Consensus 12 ~~P~t~~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~-- 83 (462)
T PF00171_consen 12 INPATGEVIGEVPSAT------AEDVDRAVEAARAAFKEWSKLPAAERARILERFADLLEERRDELAELIALETGKPI-- 83 (462)
T ss_dssp EETTTECEEEEEEEBS------HHHHHHHHHHHHHHHHHHTTSSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTSSH--
T ss_pred CCCCCcCEEEEEcCCC------HHHHHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHHHhhccccccccccccccccc--
Confidence 4567899999999888 89999999999999999999999999999999999999999999999887765443
Q ss_pred chhHHHHHHhhcCHHHHHHHHHHHHHHhccccc-ccccccccccCCCeEEEEeecceeEEEEEcCC-Cch-hHHHHHHHH
Q 005047 348 GYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 424 (716)
Q Consensus 348 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~-~P~-~~~~~~~~A 424 (716)
.++ ..++..+++.+++++.+.+. .++..+. ..+...++.++|+|||++|+|| +|. +.++++++|
T Consensus 84 --~~a--------~~ev~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~A 150 (462)
T PF00171_consen 84 --AEA--------RGEVDRAIDFLRYYADAARKLAGEVLPS---DPGSRNYTRREPLGVVLIITPWNFPLYLAVWKIAPA 150 (462)
T ss_dssp --HHH--------HHHHHHHHHHHHHHHHHHHHHTEEEEEE---STTEEEEEEEEE-SEEEEEE-SSSCTHHHHHHHHHH
T ss_pred --ccc--------cchhhhhhhhhhhhhhcccceehhhccc---ccccccccccccccceeecccccccccccccchhhh
Confidence 122 23666777777777654432 2333222 2467788999999999999998 685 568999999
Q ss_pred HHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CchHHHhhcCCCCccEEEeecCHHHHHHHHHhcC
Q 005047 425 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK 502 (716)
Q Consensus 425 LaaGNtvv~Kps~~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a~ 502 (716)
|++||+||+|||+.+|+++.++++++++ + +|+|++|+|+| +.+++..|..||++++|+||||+++|+.|++.+.
T Consensus 151 LaaGN~VVlkps~~~~~~~~~l~~~~~~----AglP~gvv~vv~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~a~ 226 (462)
T PF00171_consen 151 LAAGNTVVLKPSEQAPLTALLLAELLEE----AGLPPGVVNVVPGDGSEVGEALVSHPDVDLVSFTGSTATGRAIAKAAA 226 (462)
T ss_dssp HHTT-EEEEEEBTTSHHHHHHHHHHHHH----HTSTTTSEEEECSSTHHHHHHHHHTTTEEEEEEESEHHHHHHHHHHHH
T ss_pred hcccccceeeeccccccccccchhhccc----cccccccccccccccccccceeeeccccceeeecchhhhhhhhhhhcc
Confidence 9999999999999999999999999997 7 99999999997 7788899999999999999999999999998873
Q ss_pred ---CCEEEecCCcceEEEcCCCCHHHHHHHHHHhcCCCCC-ccccccceEEEeCccCChhhHHHHHHHHHhcC-------
Q 005047 503 ---IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMVETLLVHKDLACNGALNELVVELQHEG------- 571 (716)
Q Consensus 503 ---~~~~lElGGk~p~iV~~dADl~~Aa~~iv~~~f~n~g-~C~a~~~rv~V~~~i~dd~f~~~l~~~~~~~~------- 571 (716)
+|+++|||||||+||++|||+|.|++.+++|+|.|+| .|+++ +|+|||+++| |+|+++|+++++++.
T Consensus 227 ~~~~~v~lelgG~~p~iV~~daDld~aa~~iv~~~~~~~GQ~C~a~-~~v~V~~~i~-~~f~~~l~~~~~~l~~g~~~~~ 304 (462)
T PF00171_consen 227 KNLKPVVLELGGKNPVIVDPDADLDKAAEAIVRGAFFNSGQSCTAP-SRVLVHESIY-DEFVEALKERVAKLRVGDPLDE 304 (462)
T ss_dssp TTTSEEEEEECEEEEEEE-TTSHHHHHHHHHHHHHHGGGGTSTTSE-EEEEEEHHHH-HHHHHHHHHHHHTSEBSSTTST
T ss_pred cccccccccccccceeeEecccccccccccccchhccccccccccc-cccccccccc-chhhhhhhhccccccccCCccc
Confidence 9999999999999999999999999999999999987 99999 9999999999 799999999998752
Q ss_pred ---------------------------CEE-ecCc-----cccccc--c-C-----CCCccccccccCceEEEEEeCCHH
Q 005047 572 ---------------------------VGL-FGGP-----RASKLL--Q-I-----PETRLFHHEYNSMVCTVEIVDDVR 610 (716)
Q Consensus 572 ---------------------------~~~-~g~~-----~~~~~~--p-v-----~~~~~~~eE~FGPVl~v~~~~~~d 610 (716)
+++ .|+. ...++| | | ++|++++||+||||++|++|+|+|
T Consensus 305 ~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~ 384 (462)
T PF00171_consen 305 STDVGPLISKAQRERVKALIEDAVAEGAKVLCGGEPQEADPENGFFIPPTVLEDVPPDMPIMQEEIFGPVLPVVPYDDLD 384 (462)
T ss_dssp TCSBCHCSSHHHHHHHHHHHHHHHHTTSEEEEETSSSSBCSSSSTEEEEEEEESEHTTSHHHHSC-SSSEEEEEEESSHH
T ss_pred cccccccccchhhhhcccccccccccccccccccccccccccccccccccccccccccccccccccccccceecccccch
Confidence 122 2441 112222 5 2 478999999999999999999999
Q ss_pred HHHHHHHhcCCCceeEEEccCHHHHHHHHHccCcceEEEcCCcCCCCC-CcccCcceeeccccccccccccchhcccEEE
Q 005047 611 AAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDG-ARFGLGAEVGISTSRIHARGPVGVEGLLTTR 689 (716)
Q Consensus 611 eAi~~aN~~~~GL~a~i~t~d~~~a~~~~~~~~~G~v~vN~~~~~~~~-~p~g~g~~sG~~~~~~~~~g~~gl~~ft~~k 689 (716)
|||+++|+++|||+++|||+|.++++++++++++|+|+||+++..... .||||.+.||+| +++|++|+++||+.|
T Consensus 385 eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~~~SG~G----~~~g~~~l~~~~~~k 460 (462)
T PF00171_consen 385 EAIALANDSEYGLTASVFSRDESRAERLARRLEAGRVWINDPPTGDPDGLPFGGFKQSGIG----REGGPEGLDEFTQIK 460 (462)
T ss_dssp HHHHHHHHSSEESEEEEECSBHHHHHHHHHHSTSSEEEESSSSTGGTTSSEBE-SGGGEES----EBSHHHHHHGTEEEE
T ss_pred hhhhcccccCCCceeEEecccccccccccccccccceeecCCcccccccCCCCCcccccCC----cchHHHHHHHhCCcc
Confidence 999999999999999999999999999999999999999998766544 599999999987 357999999999999
Q ss_pred EE
Q 005047 690 WI 691 (716)
Q Consensus 690 ~v 691 (716)
+|
T Consensus 461 ~V 462 (462)
T PF00171_consen 461 TV 462 (462)
T ss_dssp EE
T ss_pred CC
Confidence 86
No 90
>cd07105 ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-like. Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD.
Probab=100.00 E-value=1.3e-70 Score=612.27 Aligned_cols=378 Identities=21% Similarity=0.253 Sum_probs=321.6
Q ss_pred hHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhchhHHHHHHhhcCHHHHHHHHHHH
Q 005047 292 GAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSI 371 (716)
Q Consensus 292 ~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 371 (716)
|+++++++|++||+.|++++.++|.++|++++++|++|.++|++++++|++++.. ++ ..++..+++.+
T Consensus 1 ~v~~ai~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~----~~--------~~ei~~~~~~l 68 (432)
T cd07105 1 DADQAVEAAAAAFPAWSKTPPSERRDILLKAADLLESRRDEFIEAMMEETGATAA----WA--------GFNVDLAAGML 68 (432)
T ss_pred CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHhCCCHH----HH--------HHHHHHHHHHH
Confidence 5789999999999999999999999999999999999999999999877654421 11 23566777777
Q ss_pred HHHhcccccc-cccccccccCCCeEEEEeecceeEEEEEcCC-Cch-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHH
Q 005047 372 RILADMEEPI-GQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHK 448 (716)
Q Consensus 372 ~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~-~P~-~~~~~~~~ALaaGNtvv~Kps~~tp~t~~~l~~ 448 (716)
++++...+.. +...+.. ..+...+.+++|+|||++|+|| ||. ++++++++||++||+||+|||+.||+|+..+.+
T Consensus 69 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~ 146 (432)
T cd07105 69 REAASLITQIIGGSIPSD--KPGTLAMVVKEPVGVVLGIAPWNAPVILGTRAIAYPLAAGNTVVLKASELSPRTHWLIGR 146 (432)
T ss_pred HHHHHHHHHhcCeecccC--CCCceeEEEEecceEEEEECCcCcHHHHHHHHHHHHHhcCCEEEEECCccChHHHHHHHH
Confidence 7776543321 2222211 1234567889999999999998 685 578999999999999999999999999999999
Q ss_pred HHHHhcccc-cCcCceEEecCC----chHHHhhcCCCCccEEEeecCHHHHHHHHHhcC---CCEEEecCCcceEEEcCC
Q 005047 449 VITSAIPDT-VGEKLIGLVTSR----EEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK---IPVLGHADGICHVYVDKS 520 (716)
Q Consensus 449 l~~~al~~a-lP~gvv~vv~~~----~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a~---~~~~lElGGk~p~iV~~d 520 (716)
++.+ + +|+|++|+|+|. .++++.|..||+||+|+||||+.+|+.|++++. +|+++|||||||+||++|
T Consensus 147 ~~~~----aGlP~gv~~~v~g~~~~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElgGk~p~iV~~d 222 (432)
T cd07105 147 VFHE----AGLPKGVLNVVTHSPEDAPEVVEALIAHPAVRKVNFTGSTRVGRIIAETAAKHLKPVLLELGGKAPAIVLED 222 (432)
T ss_pred HHHH----cCcCCCcEEEEeCCCCchHHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeEEEeCCCCCceEECCC
Confidence 9986 7 999999999852 246788889999999999999999999998773 899999999999999999
Q ss_pred CCHHHHHHHHHHhcCCCCC-ccccccceEEEeCccCChhhHHHHHHHHHhcC----------------------------
Q 005047 521 ANLDVAKNIVIDAKIDYPA-ACNAMVETLLVHKDLACNGALNELVVELQHEG---------------------------- 571 (716)
Q Consensus 521 ADl~~Aa~~iv~~~f~n~g-~C~a~~~rv~V~~~i~dd~f~~~l~~~~~~~~---------------------------- 571 (716)
||+|.|++.+++++|.|+| .|+++ +|+|||+++| |+|+++|+++++++.
T Consensus 223 adl~~aa~~i~~~~~~~~GQ~C~a~-~~v~V~~~i~-~~f~~~l~~~~~~~~~g~~~~gp~i~~~~~~~~~~~i~~a~~~ 300 (432)
T cd07105 223 ADLDAAANAALFGAFLNSGQICMST-ERIIVHESIA-DEFVEKLKAAAEKLFAGPVVLGSLVSAAAADRVKELVDDALSK 300 (432)
T ss_pred CCHHHHHHHHHHHHHhcCCCCCcCC-ceEEEcHHHH-HHHHHHHHHHHHhhcCCCCcccccCCHHHHHHHHHHHHHHHHC
Confidence 9999999999999999987 99999 9999999999 799999999987542
Q ss_pred -CEE-ecCccc---cc-cc-c-C-----CCCccccccccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEccCHHHHHHH
Q 005047 572 -VGL-FGGPRA---SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETF 638 (716)
Q Consensus 572 -~~~-~g~~~~---~~-~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~i~t~d~~~a~~~ 638 (716)
.++ .|+... .+ ++ | | +++++++||+||||++|++|+|.||||+++|+++|||++||||+|.++++++
T Consensus 301 ga~~~~gg~~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~deai~~~n~~~~gL~~~v~t~d~~~~~~~ 380 (432)
T cd07105 301 GAKLVVGGLADESPSGTSMPPTILDNVTPDMDIYSEESFGPVVSIIRVKDEEEAVRIANDSEYGLSAAVFTRDLARALAV 380 (432)
T ss_pred CCEEEeCCCcCCCCCCeEEeeEEEecCCCCCHHHhCCCcCCeEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHH
Confidence 222 244322 23 33 5 2 3688999999999999999999999999999999999999999999999999
Q ss_pred HHccCcceEEEcCCcCC-CCCCcccCcceeeccccccccccccchhcccEEEEEEE
Q 005047 639 LCQVDSAAVFHNASTRF-CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILR 693 (716)
Q Consensus 639 ~~~~~~G~v~vN~~~~~-~~~~p~g~g~~sG~~~~~~~~~g~~gl~~ft~~k~v~~ 693 (716)
++++++|.|+||+++.. .+..||||.+.||+| +++|++|+++||+.|+|++
T Consensus 381 ~~~l~~g~v~vN~~~~~~~~~~PfgG~~~SG~G----~~~g~~~l~~~~~~k~v~~ 432 (432)
T cd07105 381 AKRIESGAVHINGMTVHDEPTLPHGGVKSSGYG----RFNGKWGIDEFTETKWITI 432 (432)
T ss_pred HHhCCcCeEEECCCCCCCCCCCCCCCccccccc----ccChHHHHHHhhceEEEeC
Confidence 99999999999987654 467899999999986 3569999999999999863
No 91
>cd07114 ALDH_DhaS Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like. Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD.
Probab=100.00 E-value=1.1e-70 Score=617.64 Aligned_cols=395 Identities=20% Similarity=0.228 Sum_probs=338.7
Q ss_pred HHhcCCcceeEEecCCccccchhhHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Q 005047 269 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSR--RLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 346 (716)
Q Consensus 269 ~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~ 346 (716)
+|.+|+.++++..++ .+++++++++|++||+ .|+++|.++|.++|++++++|.+++++|++++.+|.+++.
T Consensus 3 ~P~tg~~i~~~~~~~------~~~v~~av~~a~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~- 75 (457)
T cd07114 3 NPATGEPWARVPEAS------AADVDRAVAAARAAFEGGAWRKLTPTERGKLLRRLADLIEANAEELAELETRDNGKLI- 75 (457)
T ss_pred CCCCCCEEEEEeCCC------HHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCH-
Confidence 578999999998888 8899999999999997 4999999999999999999999999999998776654332
Q ss_pred hchhHHHHHHhhcCHHHHHHHHHHHHHHhcccccc-cccccccccCCCeEEEEeecceeEEEEEcCC-Cch-hHHHHHHH
Q 005047 347 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEPI-GQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 423 (716)
Q Consensus 347 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~-~P~-~~~~~~~~ 423 (716)
.+ ...++..+++.+++++.+.+.. +...+. ...+...++.++|+|||++|+|| ||. +.++++++
T Consensus 76 ---~~--------~~~ev~~~~~~~~~~a~~~~~~~~~~~~~--~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ 142 (457)
T cd07114 76 ---RE--------TRAQVRYLAEWYRYYAGLADKIEGAVIPV--DKGDYLNFTRREPLGVVAAITPWNSPLLLLAKKLAP 142 (457)
T ss_pred ---HH--------HHHHHHHHHHHHHHHHHHHHHhcCccccc--CCCCceEEEEEecceEEEEECCCccHHHHHHHHHHH
Confidence 11 1246777778888776543322 222211 11244567889999999999998 685 57899999
Q ss_pred HHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CchHHHhhcCCCCccEEEeecCHHHHHHHHHhc
Q 005047 424 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST 501 (716)
Q Consensus 424 ALaaGNtvv~Kps~~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a 501 (716)
||++||+||+|||+.+|+++.+|++++.+ + +|+|+||+|++ +.++++.|..|+++++|+||||+.+|+.+++.+
T Consensus 143 AL~aGN~Vilkps~~~p~~~~~l~~~l~~----aglP~~vv~~v~g~~~~~~~~l~~~~~i~~V~ftGs~~~g~~v~~~a 218 (457)
T cd07114 143 ALAAGNTVVLKPSEHTPASTLELAKLAEE----AGFPPGVVNVVTGFGPETGEALVEHPLVAKIAFTGGTETGRHIARAA 218 (457)
T ss_pred HHhcCCeEEeECCccchHHHHHHHHHHHH----cCcCCCcEEEEeCCCchHHHHHhcCCCCCEEEEECCHHHHHHHHHHH
Confidence 99999999999999999999999999986 8 99999999996 566888888999999999999999999999887
Q ss_pred ---CCCEEEecCCcceEEEcCCCCHHHHHHHHHHhcCCCCC-ccccccceEEEeCccCChhhHHHHHHHHHhcC------
Q 005047 502 ---KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMVETLLVHKDLACNGALNELVVELQHEG------ 571 (716)
Q Consensus 502 ---~~~~~lElGGk~p~iV~~dADl~~Aa~~iv~~~f~n~g-~C~a~~~rv~V~~~i~dd~f~~~l~~~~~~~~------ 571 (716)
.||+++|||||||+||++|||++.|++.|++|+|.|+| .|+++ +|+|||+++| |+|+++|+++++++.
T Consensus 219 a~~~~~~~lelgG~~~~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~-~~v~V~~~v~-~~f~~~l~~~~~~~~~g~p~~ 296 (457)
T cd07114 219 AENLAPVTLELGGKSPNIVFDDADLDAAVNGVVAGIFAAAGQTCVAG-SRLLVQRSIY-DEFVERLVARARAIRVGDPLD 296 (457)
T ss_pred HhcCCeEEEecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCCCC-ceEEEcHHHH-HHHHHHHHHHHHhCCCCCCCC
Confidence 38999999999999999999999999999999999886 99999 9999999999 799999999987652
Q ss_pred ----------------------------CEE-ecCccc------cc-cc-c-C-----CCCccccccccCceEEEEEeCC
Q 005047 572 ----------------------------VGL-FGGPRA------SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDD 608 (716)
Q Consensus 572 ----------------------------~~~-~g~~~~------~~-~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~ 608 (716)
+++ .|+.+. .+ ++ | | +++++++||+||||++|++|+|
T Consensus 297 ~~~~~gpli~~~~~~~~~~~i~~a~~~ga~~l~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~ 376 (457)
T cd07114 297 PETQMGPLATERQLEKVERYVARAREEGARVLTGGERPSGADLGAGYFFEPTILADVTNDMRIAQEEVFGPVLSVIPFDD 376 (457)
T ss_pred CCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCCEECCEEEeCCCCCChhhhcCCcCceEEEeccCC
Confidence 222 244321 12 33 5 2 3689999999999999999999
Q ss_pred HHHHHHHHHhcCCCceeEEEccCHHHHHHHHHccCcceEEEcCCcCCCCCCcccCcceeeccccccccccccchhcccEE
Q 005047 609 VRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTT 688 (716)
Q Consensus 609 ~deAi~~aN~~~~GL~a~i~t~d~~~a~~~~~~~~~G~v~vN~~~~~~~~~p~g~g~~sG~~~~~~~~~g~~gl~~ft~~ 688 (716)
+||||+++|+++|||++||||+|.+.++++++++++|+|+||++....+..||||.++||+| +++|++|+++||+.
T Consensus 377 ~deai~~~n~~~~gL~~~ift~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~k~SG~G----~~~g~~~~~~f~~~ 452 (457)
T cd07114 377 EEEAIALANDSEYGLAAGIWTRDLARAHRVARAIEAGTVWVNTYRALSPSSPFGGFKDSGIG----RENGIEAIREYTQT 452 (457)
T ss_pred HHHHHHHhhCCCcCceeEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCCCCCccCcCC----ccchHHHHHHHhce
Confidence 99999999999999999999999999999999999999999997777778899999999986 35699999999999
Q ss_pred EEEEE
Q 005047 689 RWILR 693 (716)
Q Consensus 689 k~v~~ 693 (716)
|++++
T Consensus 453 k~~~~ 457 (457)
T cd07114 453 KSVWI 457 (457)
T ss_pred eEEeC
Confidence 99863
No 92
>cd07135 ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins. Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD.
Probab=100.00 E-value=1.2e-70 Score=610.69 Aligned_cols=383 Identities=21% Similarity=0.207 Sum_probs=316.1
Q ss_pred hhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhchhHHHHHHhhcCHHHHHHHHH
Q 005047 290 QVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAK 369 (716)
Q Consensus 290 ~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 369 (716)
.+|+++|+++|++||+.|++++.++|.++|++++++|++|+++|++++++|++++.. ++...++..+...+++++.
T Consensus 4 ~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~----e~~~~ev~~~~~~~~~~a~ 79 (436)
T cd07135 4 LDEIDSIHSRLRATFRSGKTKDLEYRLWQLKQLYWAVKDNEEAIVEALKKDLGRPPF----ETLLTEVSGVKNDILHMLK 79 (436)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHH----HHhHHHHHHHHHHHHHHHH
Confidence 779999999999999999999999999999999999999999999999988765532 3322233333334444444
Q ss_pred HHHHHhcccccccccccccccCCCeEEEEeecceeEEEEEcCC-Cch-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHH
Q 005047 370 SIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILH 447 (716)
Q Consensus 370 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~-~P~-~~~~~~~~ALaaGNtvv~Kps~~tp~t~~~l~ 447 (716)
.++.+........... ...+...+++++|+|||++|+|| ||. ++++++++||++||+||+|||+.||+++..++
T Consensus 80 ~~~~~~~~~~~~~~~~----~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~l~ 155 (436)
T cd07135 80 NLKKWAKDEKVKDGPL----AFMFGKPRIRKEPLGVVLIIGPWNYPVLLALSPLVGAIAAGCTVVLKPSELTPHTAALLA 155 (436)
T ss_pred HHHHhhCCcccCCccc----ccCCCceEEEeccCcEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCccChHHHHHHH
Confidence 4433321111100000 00123457889999999999998 696 67899999999999999999999999999999
Q ss_pred HHHHHhcccccCcCceEEecC-CchHHHhhcCCCCccEEEeecCHHHHHHHHHhcC---CCEEEecCCcceEEEcCCCCH
Q 005047 448 KVITSAIPDTVGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK---IPVLGHADGICHVYVDKSANL 523 (716)
Q Consensus 448 ~l~~~al~~alP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a~---~~~~lElGGk~p~iV~~dADl 523 (716)
+++++ .||+|++|+|+| ++++++ |..|| +|.|+||||+.+|+.|++.+. +|+++|+|||||+||++|||+
T Consensus 156 ~l~~~----~lP~g~v~vv~g~~~~~~~-l~~~~-vd~v~ftGs~~~g~~i~~~aa~~~~~~~lelgG~~~~iV~~dADl 229 (436)
T cd07135 156 ELVPK----YLDPDAFQVVQGGVPETTA-LLEQK-FDKIFYTGSGRVGRIIAEAAAKHLTPVTLELGGKSPVIVTKNADL 229 (436)
T ss_pred HHHHH----hCCcCEEEEEcCCchhHHH-HHhCC-CCEEEEECCcHHHHHHHHHHHhcCCCeEEEccCCCcEEECCCCCH
Confidence 99986 599999999996 566666 55688 999999999999999988763 899999999999999999999
Q ss_pred HHHHHHHHHhcCCCCC-ccccccceEEEeCccCChhhHHHHHHHHHhcCC------------------------------
Q 005047 524 DVAKNIVIDAKIDYPA-ACNAMVETLLVHKDLACNGALNELVVELQHEGV------------------------------ 572 (716)
Q Consensus 524 ~~Aa~~iv~~~f~n~g-~C~a~~~rv~V~~~i~dd~f~~~l~~~~~~~~~------------------------------ 572 (716)
|+|++.+++++|.|+| .|+|+ +|+|||++|| |+|+++|+++++++.+
T Consensus 230 ~~aa~~i~~~~~~~~GQ~C~a~-~rv~V~~~i~-d~f~~~l~~~~~~~~~g~p~~~~~~gpli~~~~~~~i~~~v~~ag~ 307 (436)
T cd07135 230 ELAAKRILWGKFGNAGQICVAP-DYVLVDPSVY-DEFVEELKKVLDEFYPGGANASPDYTRIVNPRHFNRLKSLLDTTKG 307 (436)
T ss_pred HHHHHHHHHHHhccCCceecCC-CEEeccHHHH-HHHHHHHHHHHHHhcCCCCCCCCCcCCCCCHHHHHHHHHHHHhcCC
Confidence 9999999999999987 99999 9999999999 7999999999876521
Q ss_pred EE-ecCccc-cc-cc-c-C-----CCCccccccccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEccCHHHHHHHHHcc
Q 005047 573 GL-FGGPRA-SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQV 642 (716)
Q Consensus 573 ~~-~g~~~~-~~-~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~i~t~d~~~a~~~~~~~ 642 (716)
++ .|+... .+ |+ | | +++++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++
T Consensus 308 ~v~~gg~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~deai~~an~~~~gL~~~v~t~d~~~a~~~~~~l 387 (436)
T cd07135 308 KVVIGGEMDEATRFIPPTIVSDVSWDDSLMSEELFGPVLPIIKVDDLDEAIKVINSRDTPLALYIFTDDKSEIDHILTRT 387 (436)
T ss_pred eEEECCCcCCCCCEEccEEEecCCCccHHHhccccCCceEEEecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHhcC
Confidence 11 132221 12 33 5 2 35889999999999999999999999999999999999999999999999999999
Q ss_pred CcceEEEcCCcCC--CCCCcccCcceeeccccccccccccchhcccEEEEEE
Q 005047 643 DSAAVFHNASTRF--CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 692 (716)
Q Consensus 643 ~~G~v~vN~~~~~--~~~~p~g~g~~sG~~~~~~~~~g~~gl~~ft~~k~v~ 692 (716)
++|.|+||++... .+..||||.+.||+| +++|++|+++||+.|+|.
T Consensus 388 ~~g~v~iN~~~~~~~~~~~PfGG~k~SG~G----~~~g~~~l~~~t~~k~i~ 435 (436)
T cd07135 388 RSGGVVINDTLIHVGVDNAPFGGVGDSGYG----AYHGKYGFDTFTHERTVV 435 (436)
T ss_pred CcCeEEECCccccccCCCCCcCCcCcccCC----ccccHhHHHHhccccccc
Confidence 9999999986543 367899999999986 357999999999999873
No 93
>cd07146 ALDH_PhpJ Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like. Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD.
Probab=100.00 E-value=2e-70 Score=612.96 Aligned_cols=395 Identities=20% Similarity=0.209 Sum_probs=330.9
Q ss_pred HHHhcCCcceeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHh
Q 005047 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 347 (716)
Q Consensus 268 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~ 347 (716)
.+|.+|+.++++..++ .+++++++++|+++ |+.+|.++|.++|++++++|++|+++|++++++|.|++..
T Consensus 4 ~~P~tg~~i~~~~~~~------~~~v~~av~~A~~~---~~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~- 73 (451)
T cd07146 4 RNPYTGEVVGTVPAGT------EEALREALALAASY---RSTLTRYQRSAILNKAAALLEARREEFARLITLESGLCLK- 73 (451)
T ss_pred cCCCCCCEEEEEcCCC------HHHHHHHHHHHHHH---HhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHH-
Confidence 4678999999998888 88999999998865 8889999999999999999999999999998877654431
Q ss_pred chhHHHHHHhhcCHHHHHHHHHHHHHHhcccc-cccccccccc--cCCCeEEEEeecceeEEEEEcCC-Cch-hHHHHHH
Q 005047 348 GYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTE--LADGLILEKTSCPLGVLLIVFES-RPD-ALVQIAS 422 (716)
Q Consensus 348 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~--~~~~~~~~~~~~PlGVv~~I~p~-~P~-~~~~~~~ 422 (716)
++ ..|+...++.+++++.... ..++..+... ...+...+.+++|+|||++|+|| ||. +.+++++
T Consensus 74 ---~a--------~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~ 142 (451)
T cd07146 74 ---DT--------RYEVGRAADVLRFAAAEALRDDGESFSCDLTANGKARKIFTLREPLGVVLAITPFNHPLNQVAHKIA 142 (451)
T ss_pred ---HH--------HHHHHHHHHHHHHHHHHHHHhcCcccccccccCCCCceEEEEEeccceEEEEccCChHHHHHHHHHH
Confidence 22 2356666666666654322 1122211100 01234567889999999999998 685 5689999
Q ss_pred HHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CchHHHhhcCCCCccEEEeecCHHHHHHHHHh
Q 005047 423 LAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKES 500 (716)
Q Consensus 423 ~ALaaGNtvv~Kps~~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~ 500 (716)
+||++||+||+|||+.||+++..+.+++++ + +|+|++|+++| +.++++.|..||++|+|+||||+.+|+.|++.
T Consensus 143 ~ALaaGN~VilKps~~~p~~~~~l~~~l~~----aglP~g~v~~v~g~~~~~~~~l~~~~~i~~V~fTGs~~~g~~i~~~ 218 (451)
T cd07146 143 PAIAANNRIVLKPSEKTPLSAIYLADLLYE----AGLPPDMLSVVTGEPGEIGDELITHPDVDLVTFTGGVAVGKAIAAT 218 (451)
T ss_pred HHHHcCCEEEEECCCCchHHHHHHHHHHHH----cCcCccceEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHH
Confidence 999999999999999999999999999986 7 99999999996 56778889999999999999999999999987
Q ss_pred cC-CCEEEecCCcceEEEcCCCCHHHHHHHHHHhcCCCCC-ccccccceEEEeCccCChhhHHHHHHHHHhcCC------
Q 005047 501 TK-IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMVETLLVHKDLACNGALNELVVELQHEGV------ 572 (716)
Q Consensus 501 a~-~~~~lElGGk~p~iV~~dADl~~Aa~~iv~~~f~n~g-~C~a~~~rv~V~~~i~dd~f~~~l~~~~~~~~~------ 572 (716)
+. +|+++|||||||+||++|||++.|++.+++++|.|+| .|+++ +|+|||+++| |+|+++|+++++++++
T Consensus 219 a~~~~~~lElGG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~-~rv~V~~~i~-d~f~~~l~~~~~~l~~g~p~~~ 296 (451)
T cd07146 219 AGYKRQLLELGGNDPLIVMDDADLERAATLAVAGSYANSGQRCTAV-KRILVHESVA-DEFVDLLVEKSAALVVGDPMDP 296 (451)
T ss_pred hcCCceeeecCCCceEEECCCCCHHHHHHHHHHHHHhhCCCCCCCC-ceEEEchHHH-HHHHHHHHHHHhcCCCCCCCCC
Confidence 74 8999999999999999999999999999999999987 99999 9999999999 7999999999987632
Q ss_pred ----------------------------EE-ecCccccccc-c-C-----CCCccccccccCceEEEEEeCCHHHHHHHH
Q 005047 573 ----------------------------GL-FGGPRASKLL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHI 616 (716)
Q Consensus 573 ----------------------------~~-~g~~~~~~~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~a 616 (716)
++ .|+.....++ | | ++|++++||+||||++|++|+|+||||+++
T Consensus 297 ~~~~gpli~~~~~~~v~~~v~~a~~~Ga~vl~gg~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~ 376 (451)
T cd07146 297 ATDMGTVIDEEAAIQIENRVEEAIAQGARVLLGNQRQGALYAPTVLDHVPPDAELVTEETFGPVAPVIRVKDLDEAIAIS 376 (451)
T ss_pred CCCcCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCCEEEcCEEeecCCCCCHHHhCCCCCCeEEEEEeCCHHHHHHHH
Confidence 11 1222111223 5 2 367899999999999999999999999999
Q ss_pred HhcCCCceeEEEccCHHHHHHHHHccCcceEEEcCCcCC-CCCCcccCcceeeccccccccccccchhcccEEEEEE
Q 005047 617 HQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRF-CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 692 (716)
Q Consensus 617 N~~~~GL~a~i~t~d~~~a~~~~~~~~~G~v~vN~~~~~-~~~~p~g~g~~sG~~~~~~~~~g~~gl~~ft~~k~v~ 692 (716)
|+++|||++||||+|.++++++++++++|+|+||+.... .+..||||.+.||+++ +++|++|+++||+.|+++
T Consensus 377 n~~~~gL~~~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~~g---~~~g~~~~~~f~~~k~~~ 450 (451)
T cd07146 377 NSTAYGLSSGVCTNDLDTIKRLVERLDVGTVNVNEVPGFRSELSPFGGVKDSGLGG---KEGVREAMKEMTNVKTYS 450 (451)
T ss_pred hCCCCCceEEEECCCHHHHHHHHHHCCcceEEECCCCCCCCCCCCcCcccccCCCc---ccChHHHHHHHhceeEEe
Confidence 999999999999999999999999999999999986544 3568999999998631 356899999999999985
No 94
>cd07132 ALDH_F3AB Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins. NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes.
Probab=100.00 E-value=2.4e-70 Score=609.89 Aligned_cols=380 Identities=20% Similarity=0.218 Sum_probs=318.6
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhchhHHHHHHhhcCHHHHHHHHHHHHHH
Q 005047 295 EMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRIL 374 (716)
Q Consensus 295 ~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (716)
+|+++|++||+.|+++|..+|.++|++++++|++|+++|++++++|++++.. ++...++..+..+++++++.++++
T Consensus 2 ~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~----~a~~~ev~~~~~~~~~~~~~~~~~ 77 (443)
T cd07132 2 EAVRRAREAFSSGKTRPLEFRIQQLEALLRMLEENEDEIVEALAKDLRKPKF----EAVLSEILLVKNEIKYAISNLPEW 77 (443)
T ss_pred hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHH----HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5889999999999999999999999999999999999999999988866532 333344555566777777777766
Q ss_pred hcccccccccccccccCCCeEEEEeecceeEEEEEcCC-Cch-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHH
Q 005047 375 ADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITS 452 (716)
Q Consensus 375 ~~~~~~~g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~-~P~-~~~~~~~~ALaaGNtvv~Kps~~tp~t~~~l~~l~~~ 452 (716)
..... ...... ..+...++.++|+|||++|+|| ||. +.++++++||++||+||+|||+.||.|+..+++++++
T Consensus 78 ~~~~~-~~~~~~----~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~l~~~~~~ 152 (443)
T cd07132 78 MKPEP-VKKNLA----TLLDDVYIYKEPLGVVLIIGAWNYPLQLTLVPLVGAIAAGNCVVIKPSEVSPATAKLLAELIPK 152 (443)
T ss_pred hCCcc-CCCccc----cCCCceEEEEecccEEEEEcCCchhHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHH
Confidence 53211 111000 1122457889999999999998 795 6789999999999999999999999999999999985
Q ss_pred hcccccCcCceEEecC-CchHHHhhcCCCCccEEEeecCHHHHHHHHHhc---CCCEEEecCCcceEEEcCCCCHHHHHH
Q 005047 453 AIPDTVGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST---KIPVLGHADGICHVYVDKSANLDVAKN 528 (716)
Q Consensus 453 al~~alP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a---~~~~~lElGGk~p~iV~~dADl~~Aa~ 528 (716)
++|+|++|++++ .++...++ + ++||+|+||||+++|+.|++.+ .+|+++|||||||+||++|||+|.|++
T Consensus 153 ----~lp~gv~~vv~g~~~~~~~l~-~-~~vd~V~fTGs~~~g~~i~~~a~~~~~~~~lElgG~~p~iV~~dADl~~aa~ 226 (443)
T cd07132 153 ----YLDKECYPVVLGGVEETTELL-K-QRFDYIFYTGSTSVGKIVMQAAAKHLTPVTLELGGKSPCYVDKSCDIDVAAR 226 (443)
T ss_pred ----hCCcCeEEEEeCCHHHHHHHH-h-CCCCEEEEECChHHHHHHHHHHHhhCCceEEEcCCCCceEEcCCCCHHHHHH
Confidence 599999999996 44455544 4 4899999999999999998876 399999999999999999999999999
Q ss_pred HHHHhcCCCCC-ccccccceEEEeCccCChhhHHHHHHHHHhcCC----------------------------E-EecCc
Q 005047 529 IVIDAKIDYPA-ACNAMVETLLVHKDLACNGALNELVVELQHEGV----------------------------G-LFGGP 578 (716)
Q Consensus 529 ~iv~~~f~n~g-~C~a~~~rv~V~~~i~dd~f~~~l~~~~~~~~~----------------------------~-~~g~~ 578 (716)
.+++|+|.|+| +|+|+ +|+|||+++| |+|+++|+++++++.. + +.|+.
T Consensus 227 ~i~~~~f~~~GQ~C~a~-~rv~V~~~i~-d~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~v~~~i~~a~~~~gg~ 304 (443)
T cd07132 227 RIAWGKFINAGQTCIAP-DYVLCTPEVQ-EKFVEALKKTLKEFYGEDPKESPDYGRIINDRHFQRLKKLLSGGKVAIGGQ 304 (443)
T ss_pred HHHHHHHhcCCCceeCC-cEEEEcHHHH-HHHHHHHHHHHHHhcCCCCCcccccCCcCCHHHHHHHHHHHhCCEEEeCCc
Confidence 99999999986 99999 9999999999 7999999998877521 0 12332
Q ss_pred cc-cc-cc-c-C-----CCCccccccccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEccCHHHHHHHHHccCcceEEE
Q 005047 579 RA-SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFH 649 (716)
Q Consensus 579 ~~-~~-~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~i~t~d~~~a~~~~~~~~~G~v~v 649 (716)
.. .+ ++ | | ++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.++++++++|.|+|
T Consensus 305 ~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~an~~~~gL~a~i~t~d~~~~~~~~~~l~~G~v~I 384 (443)
T cd07132 305 TDEKERYIAPTVLTDVKPSDPVMQEEIFGPILPIVTVNNLDEAIEFINSREKPLALYVFSNNKKVINKILSNTSSGGVCV 384 (443)
T ss_pred cCCCCCEEeeEEEeCCCCCChHHhccccCceeEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCcceEEE
Confidence 21 12 33 5 2 368999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCcCC--CCCCcccCcceeeccccccccccccchhcccEEEEEEEcC
Q 005047 650 NASTRF--CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGN 695 (716)
Q Consensus 650 N~~~~~--~~~~p~g~g~~sG~~~~~~~~~g~~gl~~ft~~k~v~~~~ 695 (716)
|+.... .+.+||||.+.||+| +++|++|+++|++.|++++++
T Consensus 385 N~~~~~~~~~~~PfGG~k~SG~G----~~~g~~~l~~~~~~k~v~~~~ 428 (443)
T cd07132 385 NDTIMHYTLDSLPFGGVGNSGMG----AYHGKYSFDTFSHKRSCLVKS 428 (443)
T ss_pred CCcccccCCCCCCCCCCCcccCC----CcccHHHHHHhccccEEEEcc
Confidence 987543 356899999999986 356999999999999998764
No 95
>cd07133 ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-like. Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD.
Probab=100.00 E-value=2.1e-70 Score=609.43 Aligned_cols=377 Identities=17% Similarity=0.161 Sum_probs=310.7
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhchhHHHHHHhhcCHHHHHHHHHHHHHH
Q 005047 295 EMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRIL 374 (716)
Q Consensus 295 ~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (716)
+.+++|++||+.|+++|+.+|.++|++++++|++|++||++++++|+|+.. ..++... |+...++.++++
T Consensus 2 ~~~~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~---~~ea~~~-------ev~~~i~~~~~~ 71 (434)
T cd07133 2 ALLERQKAAFLANPPPSLEERRDRLDRLKALLLDNQDALAEAISADFGHRS---RHETLLA-------EILPSIAGIKHA 71 (434)
T ss_pred hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC---hHHHHHH-------HHHHHHHHHHHH
Confidence 367889999999999999999999999999999999999999998876420 1122212 334444444444
Q ss_pred hcccc-cccccc-cccccCCCeEEEEeecceeEEEEEcCC-Cch-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHH
Q 005047 375 ADMEE-PIGQIL-KRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVI 450 (716)
Q Consensus 375 ~~~~~-~~g~~~-~~~~~~~~~~~~~~~~PlGVv~~I~p~-~P~-~~~~~~~~ALaaGNtvv~Kps~~tp~t~~~l~~l~ 450 (716)
+.... ..+... .......+...+++++|+|||++|+|| ||. +++++++|||++||+||+|||+.||.|+.++++++
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~pwN~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~l~ 151 (434)
T cd07133 72 RKHLKKWMKPSRRHVGLLFLPAKAEVEYQPLGVVGIIVPWNYPLYLALGPLIAALAAGNRVMIKPSEFTPRTSALLAELL 151 (434)
T ss_pred HHHHHHHhCCcccCCccccCCCceEEEEecccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHH
Confidence 43211 111110 000001123467889999999999998 695 68899999999999999999999999999999999
Q ss_pred HHhcccccCcCceEEecCCchHHHhhcCCCCccEEEeecCHHHHHHHHHhc---CCCEEEecCCcceEEEcCCCCHHHHH
Q 005047 451 TSAIPDTVGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST---KIPVLGHADGICHVYVDKSANLDVAK 527 (716)
Q Consensus 451 ~~al~~alP~gvv~vv~~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a---~~~~~lElGGk~p~iV~~dADl~~Aa 527 (716)
++ ++|+|+||+|+|+.++++.|..|+ +|+|+||||+++|+.|++.+ .||+++|||||||+||++|||++.|+
T Consensus 152 ~~----alP~g~~~~v~g~~~~~~~l~~~~-v~~V~ftGs~~~g~~v~~~aa~~~~~~~lElgGk~~~iV~~dadl~~aa 226 (434)
T cd07133 152 AE----YFDEDEVAVVTGGADVAAAFSSLP-FDHLLFTGSTAVGRHVMRAAAENLTPVTLELGGKSPAIIAPDADLAKAA 226 (434)
T ss_pred HH----hCCcCeEEEEeCChHHHHHHHhCC-CCEEEEeCchHHHHHHHHHHHhcCceEEEEccCCCcEEEeCCCCHHHHH
Confidence 86 599999999997656788887765 99999999999999999887 38999999999999999999999999
Q ss_pred HHHHHhcCCCCC-ccccccceEEEeCccCChhhHHHHHHHHHhcC--------------------------------CEE
Q 005047 528 NIVIDAKIDYPA-ACNAMVETLLVHKDLACNGALNELVVELQHEG--------------------------------VGL 574 (716)
Q Consensus 528 ~~iv~~~f~n~g-~C~a~~~rv~V~~~i~dd~f~~~l~~~~~~~~--------------------------------~~~ 574 (716)
+.+++++|.|+| .|+|+ +|+|||+++| |+|+++|+++++++. .++
T Consensus 227 ~~i~~~~~~~~GQ~C~a~-~rv~V~~~i~-~~f~~~l~~~~~~~~~g~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v 304 (434)
T cd07133 227 ERIAFGKLLNAGQTCVAP-DYVLVPEDKL-EEFVAAAKAAVAKMYPTLADNPDYTSIINERHYARLQGLLEDARAKGARV 304 (434)
T ss_pred HHHHHHHhccCCCcccCC-CEEEEcHHHH-HHHHHHHHHHHHHhcCCCCCCCCcCCCCCHHHHHHHHHHHHHHHhCCCEE
Confidence 999999999987 99999 9999999999 799999999887642 122
Q ss_pred e-cCccc----cc-cc-c-C-----CCCccccccccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEccCHHHHHHHHHc
Q 005047 575 F-GGPRA----SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQ 641 (716)
Q Consensus 575 ~-g~~~~----~~-~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~i~t~d~~~a~~~~~~ 641 (716)
. |+... .+ ++ | | +++++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++++++
T Consensus 305 ~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~~~~ 384 (434)
T cd07133 305 IELNPAGEDFAATRKLPPTLVLNVTDDMRVMQEEIFGPILPILTYDSLDEAIDYINARPRPLALYYFGEDKAEQDRVLRR 384 (434)
T ss_pred EecCCCCcCCCCCcEEeeEEEeCCCCCCcccccccCCCeeEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHh
Confidence 2 33321 13 33 5 2 3689999999999999999999999999999999999999999999999999999
Q ss_pred cCcceEEEcCCcC--CCCCCcccCcceeeccccccccccccchhcccEEEEEE
Q 005047 642 VDSAAVFHNASTR--FCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 692 (716)
Q Consensus 642 ~~~G~v~vN~~~~--~~~~~p~g~g~~sG~~~~~~~~~g~~gl~~ft~~k~v~ 692 (716)
+++|.|+||++.. ..+..||||.+.||+| +++|.+|+++||+.|+|+
T Consensus 385 l~~G~v~iN~~~~~~~~~~~PfGG~k~SG~G----~~~g~~~~~~ft~~k~v~ 433 (434)
T cd07133 385 THSGGVTINDTLLHVAQDDLPFGGVGASGMG----AYHGKEGFLTFSHAKPVF 433 (434)
T ss_pred CCcceEEECCcccccCCCCCCcCCCCcccCC----CcCCHHHHHHhcccceec
Confidence 9999999998753 2367899999999986 356999999999999874
No 96
>PRK15398 aldehyde dehydrogenase EutE; Provisional
Probab=100.00 E-value=2.3e-70 Score=610.05 Aligned_cols=378 Identities=18% Similarity=0.208 Sum_probs=308.6
Q ss_pred chhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhchhHHHHHHhhcCHHHHHHHH
Q 005047 289 KQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLA 368 (716)
Q Consensus 289 ~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 368 (716)
..+|+++++++|++||++|+++|.++|.++|++++++|++|+++|++++.+|++++. .++.. ..+.+.+
T Consensus 34 ~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~la~~l~~~~~ela~~~~~E~Gk~~----~ea~~-------~~~~~~~ 102 (465)
T PRK15398 34 VFASVDDAVAAAKVAQQRYQQKSLAMRQRIIDAIREALLPHAEELAELAVEETGMGR----VEDKI-------AKNVAAA 102 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCc----HHHHH-------HHHHHHH
Confidence 378999999999999999999999999999999999999999999999887765432 12211 1122222
Q ss_pred HHHHHHhcccccccccccccccCCCeEEEEeecceeEEEEEcCC-Cch-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHH
Q 005047 369 KSIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAIL 446 (716)
Q Consensus 369 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~-~P~-~~~~~~~~ALaaGNtvv~Kps~~tp~t~~~l 446 (716)
+.++ +.......... ..+...++.++|+|||++|+|| ||. ++++++++||++||+||+|||+.||+|+.++
T Consensus 103 ~~~~---~~~~~~~~~~~----~~~~~~~v~~~P~GVV~~I~PwN~P~~~~~~~ia~ALaaGN~VVlKps~~tp~t~~~l 175 (465)
T PRK15398 103 EKTP---GVEDLTTEALT----GDNGLTLIEYAPFGVIGAVTPSTNPTETIINNAISMLAAGNSVVFSPHPGAKKVSLRA 175 (465)
T ss_pred HHhc---cccccccCccc----CCCceeEEEecccEEEEEeeCCCCchHHHHHHHHHHHHhCCcEEEECCccchHHHHHH
Confidence 2111 00000011110 1123457788999999999999 795 5789999999999999999999999999999
Q ss_pred HHHHHHhcccc-cCcCceEEecC-CchHHHhhcCCCCccEEEeecCHHHHHHHHHhcCCCEEEecCCcceEEEcCCCCHH
Q 005047 447 HKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLD 524 (716)
Q Consensus 447 ~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a~~~~~lElGGk~p~iV~~dADl~ 524 (716)
++++++++.++ +|+|++|+|++ +.++++.|..||+||+|+||||+++|+.|++ +.+|+++|||||||+||++|||||
T Consensus 176 ~~ll~~~l~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGS~~~G~~v~~-~~k~~~~elGGk~p~IV~~dADld 254 (465)
T PRK15398 176 IELLNEAIVAAGGPENLVVTVAEPTIETAQRLMKHPGIALLVVTGGPAVVKAAMK-SGKKAIGAGAGNPPVVVDETADIE 254 (465)
T ss_pred HHHHHHHHHHcCCCCCeEEEecCCCHHHHHHHHcCCCccEEEeeCCHHHHHHHHH-cCCceeeecCCCceEEEecCCCHH
Confidence 99999888889 99999999996 5567788888999999999999999999998 679999999999999999999999
Q ss_pred HHHHHHHHhcCCCCC-ccccccceEEEeCccCChhhHHHHHHH------------HHhc----C--C-EE-ecCcc----
Q 005047 525 VAKNIVIDAKIDYPA-ACNAMVETLLVHKDLACNGALNELVVE------------LQHE----G--V-GL-FGGPR---- 579 (716)
Q Consensus 525 ~Aa~~iv~~~f~n~g-~C~a~~~rv~V~~~i~dd~f~~~l~~~------------~~~~----~--~-~~-~g~~~---- 579 (716)
+|++.+++|+|.|+| +|+|+ +|+|||++|| |+|+++|+++ +.++ + . ++ .|+..
T Consensus 255 ~Aa~~i~~g~~~n~GQ~C~A~-~rvlV~~si~-d~f~~~l~~~~~~li~~~~~~~v~~~l~~~~~~~~~~~~g~~~~~i~ 332 (465)
T PRK15398 255 KAARDIVKGASFDNNLPCIAE-KEVIVVDSVA-DELMRLMEKNGAVLLTAEQAEKLQKVVLKNGGTVNKKWVGKDAAKIL 332 (465)
T ss_pred HHHHHHHHhcccCCCCcCCCC-ceEEEeHHHH-HHHHHHHHHcCCccCCHHHHHHHHHHHhhcccccchhhhCCCHHHHH
Confidence 999999999999987 99999 9999999999 7999999882 2211 1 0 11 12211
Q ss_pred --ccccc----c-C-----CCCccccccccCceEEEEEeCCHHHHHHHHHhcCCCc--eeEEEccCHHHHHHHHHccCcc
Q 005047 580 --ASKLL----Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAH--TDCIVAEDQKVAETFLCQVDSA 645 (716)
Q Consensus 580 --~~~~~----p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL--~a~i~t~d~~~a~~~~~~~~~G 645 (716)
...++ | | ++|++++||+||||++|++|+|+||||+++|+++||| ++||||+|.+++++|++++++|
T Consensus 333 ~~~G~~~~~~~~tvl~~v~~d~~i~~eE~FGPVl~V~~~~d~deAi~~aN~~~yGL~hs~~IfT~d~~~a~~~a~~l~~G 412 (465)
T PRK15398 333 EAAGINVPKDTRLLIVETDANHPFVVTELMMPVLPVVRVKDVDEAIALAVKLEHGNRHTAIMHSRNVDNLNKMARAIQTS 412 (465)
T ss_pred HhCCCCCCCCCCEEEecCCCCCchhcccccCceEEEEEeCCHHHHHHHHHhcccCCcceEEEecCCHHHHHHHHHhCCce
Confidence 01122 3 2 4689999999999999999999999999999999998 9999999999999999999999
Q ss_pred eEEEcCCcCCCCCCcccCcceeeccccccccccccchhcccEEEEEEEcC
Q 005047 646 AVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGN 695 (716)
Q Consensus 646 ~v~vN~~~~~~~~~p~g~g~~sG~~~~~~~~~g~~gl~~ft~~k~v~~~~ 695 (716)
+|+||.++. +.+||||.+.|. .+.+|+.| ...|..|++..+.
T Consensus 413 ~V~iN~~~~--~~~p~gg~~~s~-----~~~~~~~g-~~~~~~~~~~~~~ 454 (465)
T PRK15398 413 IFVKNGPSY--AGLGLGGEGFTT-----FTIATPTG-EGVTSARTFTRRR 454 (465)
T ss_pred EEEECCCCc--cccCcCCCCCce-----eeecccCC-CCccchhhhhhhe
Confidence 999998753 567898776553 45568999 8999999987754
No 97
>cd07149 ALDH_y4uC Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1. Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD.
Probab=100.00 E-value=5.3e-70 Score=612.57 Aligned_cols=397 Identities=19% Similarity=0.262 Sum_probs=334.5
Q ss_pred HHHhcCCcceeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHh
Q 005047 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 347 (716)
Q Consensus 268 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~ 347 (716)
.+|.+|+.++++...+ .+++++++++|++||+.|+++|.++|.++|++++++|++++++|++++.+|.+++..
T Consensus 4 ~~P~tg~~~~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~- 76 (453)
T cd07149 4 ISPYDGEVIGRVPVAS------EEDVEKAIAAAKEGAKEMKSLPAYERAEILERAAQLLEERREEFARTIALEAGKPIK- 76 (453)
T ss_pred cCCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCHH-
Confidence 4678899999998888 889999999999999999999999999999999999999999999998877654432
Q ss_pred chhHHHHHHhhcCHHHHHHHHHHHHHHhcccc-ccccccccccc--CCCeEEEEeecceeEEEEEcCC-Cch-hHHHHHH
Q 005047 348 GYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTEL--ADGLILEKTSCPLGVLLIVFES-RPD-ALVQIAS 422 (716)
Q Consensus 348 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~--~~~~~~~~~~~PlGVv~~I~p~-~P~-~~~~~~~ 422 (716)
++ ..++...++.+++++...+ ..++..+.... ..+...+.+++|+|||++|+|| ||. +.+++++
T Consensus 77 ---~a--------~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~ 145 (453)
T cd07149 77 ---DA--------RKEVDRAIETLRLSAEEAKRLAGETIPFDASPGGEGRIGFTIREPIGVVAAITPFNFPLNLVAHKVG 145 (453)
T ss_pred ---HH--------HHHHHHHHHHHHHHHHHHHHhcCccccccccCCCCCeeEEEEeecceEEEEECCCCChHHHHHHHHH
Confidence 22 1245555565555443221 11222111000 1133457889999999999998 686 5789999
Q ss_pred HHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CchHHHhhcCCCCccEEEeecCHHHHHHHHHh
Q 005047 423 LAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKES 500 (716)
Q Consensus 423 ~ALaaGNtvv~Kps~~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~ 500 (716)
+||++||+||+|||+.+|+++.++++++++ + +|+|++|+|+| .++++..|..||++|+|+||||+++|+.|++.
T Consensus 146 ~ALaaGN~VI~Kps~~~p~~~~~l~~~l~~----ag~P~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~ 221 (453)
T cd07149 146 PAIAAGNAVVLKPASQTPLSALKLAELLLE----AGLPKGALNVVTGSGETVGDALVTDPRVRMISFTGSPAVGEAIARK 221 (453)
T ss_pred HHHHcCCEEEEECCCcchHHHHHHHHHHHH----cCcCccceEEeecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHH
Confidence 999999999999999999999999999986 7 99999999996 55668888899999999999999999999988
Q ss_pred cC-CCEEEecCCcceEEEcCCCCHHHHHHHHHHhcCCCCC-ccccccceEEEeCccCChhhHHHHHHHHHhcCC------
Q 005047 501 TK-IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMVETLLVHKDLACNGALNELVVELQHEGV------ 572 (716)
Q Consensus 501 a~-~~~~lElGGk~p~iV~~dADl~~Aa~~iv~~~f~n~g-~C~a~~~rv~V~~~i~dd~f~~~l~~~~~~~~~------ 572 (716)
+. +|+++|||||||+||++|||++.|++.+++++|.|+| .|+++ +|+|||+++| |+|+++|+++++++.+
T Consensus 222 a~~~~~~lelGGk~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~-~~v~V~~~i~-d~f~~~L~~~~~~~~~g~p~~~ 299 (453)
T cd07149 222 AGLKKVTLELGSNAAVIVDADADLEKAVERCVSGAFANAGQVCISV-QRIFVHEDIY-DEFLERFVAATKKLVVGDPLDE 299 (453)
T ss_pred cCCCceeeecCCCceEEECCCCCHHHHHHHHHHHHHHhcCCCCCCC-ceEEEcHhHH-HHHHHHHHHHHHhCCcCCCCCC
Confidence 75 8999999999999999999999999999999999986 99999 9999999999 7999999999887632
Q ss_pred ----------------------------EE-ecCccccccc-c-C-----CCCccccccccCceEEEEEeCCHHHHHHHH
Q 005047 573 ----------------------------GL-FGGPRASKLL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHI 616 (716)
Q Consensus 573 ----------------------------~~-~g~~~~~~~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~a 616 (716)
++ .|+.....++ | | +++++++||+||||++|++|+|+||||+++
T Consensus 300 ~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~ 379 (453)
T cd07149 300 DTDVGPMISEAEAERIEEWVEEAVEGGARLLTGGKRDGAILEPTVLTDVPPDMKVVCEEVFAPVVSLNPFDTLDEAIAMA 379 (453)
T ss_pred CCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCeEEcCEEEeCCCCCCHHHhCCCCCceEEEEEeCCHHHHHHHH
Confidence 11 1222211233 5 2 357899999999999999999999999999
Q ss_pred HhcCCCceeEEEccCHHHHHHHHHccCcceEEEcCCcCC-CCCCcccCcceeeccccccccccccchhcccEEEEEE
Q 005047 617 HQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRF-CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 692 (716)
Q Consensus 617 N~~~~GL~a~i~t~d~~~a~~~~~~~~~G~v~vN~~~~~-~~~~p~g~g~~sG~~~~~~~~~g~~gl~~ft~~k~v~ 692 (716)
|+++|||++||||+|.+++.++++++++|.|+||++... .+..||||.+.||+| +++|++|+++||+.|+|+
T Consensus 380 n~~~~gLt~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfGG~~~SG~G----~~~g~~~~~~~~~~k~~~ 452 (453)
T cd07149 380 NDSPYGLQAGVFTNDLQKALKAARELEVGGVMINDSSTFRVDHMPYGGVKESGTG----REGPRYAIEEMTEIKLVC 452 (453)
T ss_pred hCCCcCceEEEEcCCHHHHHHHHHHcCcCeEEECCCCCCCCCCCCcCCccccccC----CCChHHHHHHhhceeEEe
Confidence 999999999999999999999999999999999987644 467899999999986 357999999999999985
No 98
>cd07126 ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12), family 12: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. P5CDH is a mitochondrial enzyme involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. The P5CDH, ALDH12A1 gene, in Arabidopsis, has been identified as an osmotic-stress-inducible ALDH gene. This CD contains both Viridiplantae and Alveolata P5CDH sequences.
Probab=100.00 E-value=8.3e-70 Score=606.97 Aligned_cols=379 Identities=16% Similarity=0.160 Sum_probs=319.2
Q ss_pred HHHhcCCcceeEEecCCccccchhhHHHHHHHHHHHHHHH--hcCCHHHH----HHHHHHHHHHHHhC--HHHHHHHHHH
Q 005047 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRL--QALQSQDR----RKILLDVADALEAN--ESLIKVENEA 339 (716)
Q Consensus 268 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w--~~~~~~~R----~~~L~~~a~~l~~~--~~el~~~~~~ 339 (716)
.+|.+|+.++++..++ .+|+++|+++|++||+.| +.++..+| .++|++++++|+++ .++|++++++
T Consensus 17 ~nP~t~~~i~~~~~a~------~~dv~~Av~aA~~A~~~W~~~~~~~~~R~l~~~~il~~~a~~l~~~~~~~~la~~~~~ 90 (489)
T cd07126 17 LDPLNGDKFISVPDTD------EDEINEFVDSLRQCPKSGLHNPLKNPERYLLYGDVSHRVAHELRKPEVEDFFARLIQR 90 (489)
T ss_pred eCCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHhccccCCCHHHHhhhHHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 5688999999999888 899999999999999998 55779999 89999999999999 4999999887
Q ss_pred HHHHHHHhchhHHHHHHhhcCHHHHHHHHHHHHHHhcccc-cccccccccccCCCeEEEEeecceeEEEEEcCC-Cch-h
Q 005047 340 DVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-A 416 (716)
Q Consensus 340 d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~-~P~-~ 416 (716)
|+||.. .++ ..|+..+++.+++|++..+ ..+..........+...+++|+|+|||++|+|| ||. +
T Consensus 91 e~GK~~----~~a--------~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~v~r~P~GVV~~I~PwNfP~~l 158 (489)
T cd07126 91 VAPKSD----AQA--------LGEVVVTRKFLENFAGDQVRFLARSFNVPGDHQGQQSSGYRWPYGPVAIITPFNFPLEI 158 (489)
T ss_pred HcCCCH----HHH--------HHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCCceeEEEEecceEEEEECCCchHHHH
Confidence 765432 122 3578889999999986543 233321101111234568899999999999998 696 6
Q ss_pred HHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CchHHHhhcCCCCccEEEeecCHHHH
Q 005047 417 LVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLV 494 (716)
Q Consensus 417 ~~~~~~~ALaaGNtvv~Kps~~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g 494 (716)
.+++++|||++||+||+||||.||+|+.+|++++.+ + ||+|++|+|+| +++++. +..|++||+|+||||+++|
T Consensus 159 ~~~~ia~ALaaGN~VVlKPSe~tp~~~~~l~~~~~~----aGlP~gv~~vv~G~~~~~~~-l~~~~~v~~V~FTGS~~vG 233 (489)
T cd07126 159 PALQLMGALFMGNKPLLKVDSKVSVVMEQFLRLLHL----CGMPATDVDLIHSDGPTMNK-ILLEANPRMTLFTGSSKVA 233 (489)
T ss_pred HHHHHHHHHHcCCEEEEECCCCCCHHHHHHHHHHHH----hCcCcCcEEEEeCCchhHHH-HhcCCCCCEEEEECCHHHH
Confidence 789999999999999999999999999999999986 7 99999999996 455555 5568899999999999999
Q ss_pred HHHHHhcCCCEEEecCCcceEEEcCCC-CHHHHHHHHHHhcCCCCC-ccccccceEEEeCc-cCChhhHHHHHHHHHhcC
Q 005047 495 SQIKESTKIPVLGHADGICHVYVDKSA-NLDVAKNIVIDAKIDYPA-ACNAMVETLLVHKD-LACNGALNELVVELQHEG 571 (716)
Q Consensus 495 ~~i~~~a~~~~~lElGGk~p~iV~~dA-Dl~~Aa~~iv~~~f~n~g-~C~a~~~rv~V~~~-i~dd~f~~~l~~~~~~~~ 571 (716)
|.|+..+++++.+|+|||||+||++|| |+|.|++.+++++|.|+| +|+|+ +|+|||++ ++ |+|+++|++.++++.
T Consensus 234 r~i~~~~g~k~~lElgg~~~~IV~~Da~dld~a~~~~~~g~f~naGQ~C~a~-~rv~V~~~i~~-d~f~~~l~~~~~~~~ 311 (489)
T cd07126 234 ERLALELHGKVKLEDAGFDWKILGPDVSDVDYVAWQCDQDAYACSGQKCSAQ-SILFAHENWVQ-AGILDKLKALAEQRK 311 (489)
T ss_pred HHHHHHhCCCEEeecCCCCceEECCCcccHHHHHHHHHHHHHhcCCCcCCCC-ceEEEeCcchH-HHHHHHHHHHHHhcc
Confidence 999998888999999999999999999 999999999999999987 99999 99999999 57 699999999876542
Q ss_pred -----------------------------CEEe-cCccc------c--ccc-c--C--C--------CCccccccccCce
Q 005047 572 -----------------------------VGLF-GGPRA------S--KLL-Q--I--P--------ETRLFHHEYNSMV 600 (716)
Q Consensus 572 -----------------------------~~~~-g~~~~------~--~~~-p--v--~--------~~~~~~eE~FGPV 600 (716)
++++ |+... . +|+ | + + +|++++||+||||
T Consensus 312 ~g~~~~Gpli~~~~~~v~~~i~~a~~~~Ga~~l~GG~~~~~~~~~~~~~~~~PTvl~~~~~~~~~~~~~~i~~eEiFGPV 391 (489)
T cd07126 312 LEDLTIGPVLTWTTERILDHVDKLLAIPGAKVLFGGKPLTNHSIPSIYGAYEPTAVFVPLEEIAIEENFELVTTEVFGPF 391 (489)
T ss_pred cCCCcCCCCcCHHHHHHHHHHHHHHhCCCCEEEeCCcccccccccCCcceecCeEEEeccccccCCCCCHHHhCCCcCCE
Confidence 2222 44321 1 234 5 2 1 5789999999999
Q ss_pred EEEEEeCC--HHHHHHHHHhcCCCceeEEEccCHHHHHHHHHccCcce--EEEcCCcCCCCC----CcccCcceeeccc
Q 005047 601 CTVEIVDD--VRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAA--VFHNASTRFCDG----ARFGLGAEVGIST 671 (716)
Q Consensus 601 l~v~~~~~--~deAi~~aN~~~~GL~a~i~t~d~~~a~~~~~~~~~G~--v~vN~~~~~~~~----~p~g~g~~sG~~~ 671 (716)
++|++|+| +||||+++|+++|||++||||+|.++++++++++++|+ |+||..+...+. .||||.|.||+|+
T Consensus 392 l~V~~~~~~~~deai~~aN~~~~gL~~~vft~d~~~~~~~~~~~~~G~~~v~~n~~~~~~~~~~~~~pfgg~k~sg~g~ 470 (489)
T cd07126 392 QVVTEYKDEQLPLVLEALERMHAHLTAAVVSNDIRFLQEVLANTVNGTTYAGIRARTTGAPQNHWFGPAGDPRGAGIGT 470 (489)
T ss_pred EEEEEECCCCHHHHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCcceEEEEecCCCCCCCcccCcCCCCCCcccCCCC
Confidence 99999999 99999999999999999999999999999999999999 668876655433 8999999999863
No 99
>cd07095 ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like. N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate.
Probab=100.00 E-value=3.9e-70 Score=606.68 Aligned_cols=374 Identities=17% Similarity=0.152 Sum_probs=312.2
Q ss_pred hHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhchhHHHHHHhhcCHHHHHHHHHHH
Q 005047 292 GAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSI 371 (716)
Q Consensus 292 ~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 371 (716)
|+++++++|++||+.|+++|.++|.++|++++++|++|.++|++++++|++++.. ++. .|+..+++.+
T Consensus 1 ~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~----ea~--------~ev~~~~~~~ 68 (431)
T cd07095 1 QVDAAVAAARAAFPGWAALSLEERAAILRRFAELLKANKEELARLISRETGKPLW----EAQ--------TEVAAMAGKI 68 (431)
T ss_pred CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHH----HHH--------HHHHHHHHHH
Confidence 5789999999999999999999999999999999999999999998877654431 221 2455555555
Q ss_pred HHHhcccc-cccccccccccCCCeEEEEeecceeEEEEEcCC-Cch-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHH
Q 005047 372 RILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHK 448 (716)
Q Consensus 372 ~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~-~P~-~~~~~~~~ALaaGNtvv~Kps~~tp~t~~~l~~ 448 (716)
++++.... ..+..... ..+...+++++|+|||++|+|| ||. ++++++++||++||+||+|||+.+|+++.++++
T Consensus 69 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VI~Kps~~~~~~~~~l~~ 145 (431)
T cd07095 69 DISIKAYHERTGERATP---MAQGRAVLRHRPHGVMAVFGPFNFPGHLPNGHIVPALLAGNTVVFKPSELTPAVAELMVE 145 (431)
T ss_pred HHHHHHHHHhcCCcccC---CCCceEEEEEecceEEEEECCCchHHHHHHHHHHHHHhcCCEEEeeCCCCCcHHHHHHHH
Confidence 54443221 11221111 1234568889999999999998 696 567999999999999999999999999999999
Q ss_pred HHHHhcccc-cCcCceEEecCCchHHHhhcCCCCccEEEeecCHHHHHHHHHhc----CCCEEEecCCcceEEEcCCCCH
Q 005047 449 VITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST----KIPVLGHADGICHVYVDKSANL 523 (716)
Q Consensus 449 l~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a----~~~~~lElGGk~p~iV~~dADl 523 (716)
++.+ + +|+|++|+|+|+.++++.|..||+||+|+||||+++|+.|++.+ .+|++||||||||+||++|||+
T Consensus 146 ~~~~----ag~P~g~~~~v~g~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~lElgG~~~~iV~~daDl 221 (431)
T cd07095 146 LWEE----AGLPPGVLNLVQGGRETGEALAAHEGIDGLLFTGSAATGLLLHRQFAGRPGKILALEMGGNNPLVVWDVADI 221 (431)
T ss_pred HHHH----hCcChhHheEEeCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHhhccCCCcEEEECCCCCeEEECCCCCH
Confidence 9986 7 99999999997556788888999999999999999999998874 3789999999999999999999
Q ss_pred HHHHHHHHHhcCCCCC-ccccccceEEEeCc-cCChhhHHHHHHHHHhcCCE----------------------------
Q 005047 524 DVAKNIVIDAKIDYPA-ACNAMVETLLVHKD-LACNGALNELVVELQHEGVG---------------------------- 573 (716)
Q Consensus 524 ~~Aa~~iv~~~f~n~g-~C~a~~~rv~V~~~-i~dd~f~~~l~~~~~~~~~~---------------------------- 573 (716)
|.|++.+++|+|.|+| .|+++ +|+|||++ +| |+|+++|+++++++.+.
T Consensus 222 ~~aa~~i~~~~~~~~GQ~C~a~-~rv~V~~~~i~-d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~i~~~v~~a 299 (431)
T cd07095 222 DAAAYLIVQSAFLTAGQRCTCA-RRLIVPDGAVG-DAFLERLVEAAKRLRIGAPDAEPPFMGPLIIAAAAARYLLAQQDL 299 (431)
T ss_pred HHHHHHHHHHHHHhCCCCCCCC-eEEEEcCcchH-HHHHHHHHHHHHhCCCCCCCCCCCCcccccCHHHHHHHHHHHHHH
Confidence 9999999999999987 99999 99999999 99 79999999999876421
Q ss_pred ------E-ecCccc--cc-cc-c-C----CCCccccccccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEccCHHHHHH
Q 005047 574 ------L-FGGPRA--SK-LL-Q-I----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAET 637 (716)
Q Consensus 574 ------~-~g~~~~--~~-~~-p-v----~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~i~t~d~~~a~~ 637 (716)
+ .|+... .+ |+ | | ++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++
T Consensus 300 ~~~ga~~l~gg~~~~~~g~~~~Ptv~~v~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~a~~ 379 (431)
T cd07095 300 LALGGEPLLAMERLVAGTAFLSPGIIDVTDAADVPDEEIFGPLLQVYRYDDFDEAIALANATRFGLSAGLLSDDEALFER 379 (431)
T ss_pred HhcCCEEEeCCCcCCCCCeEEcCEEEecCCCChHHhCCCcCCeEEEEeeCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHH
Confidence 1 122111 12 33 5 2 358999999999999999999999999999999999999999999999999
Q ss_pred HHHccCcceEEEcCCcCC-CCCCcccCcceeeccccccccccccchhcccEEEEE
Q 005047 638 FLCQVDSAAVFHNASTRF-CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWI 691 (716)
Q Consensus 638 ~~~~~~~G~v~vN~~~~~-~~~~p~g~g~~sG~~~~~~~~~g~~gl~~ft~~k~v 691 (716)
+++++++|+|+||+++.. .+..||||.+.||+| +++|++|++ |++.|++
T Consensus 380 ~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G----~~~g~~~~~-~~~~~~~ 429 (431)
T cd07095 380 FLARIRAGIVNWNRPTTGASSTAPFGGVGLSGNH----RPSAYYAAD-YCAYPVA 429 (431)
T ss_pred HHHhCCcceEEECCCCCCCCCCCCCCCcccccCC----CCChHHHHH-HHhhhhc
Confidence 999999999999986543 345899999999986 356899999 5555554
No 100
>cd07082 ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11. NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants.
Probab=100.00 E-value=9.2e-70 Score=612.70 Aligned_cols=399 Identities=20% Similarity=0.232 Sum_probs=336.7
Q ss_pred HHHHhcCCcceeEEecCCccccchhhHHHHHHHHHHHHHHHhcC-CHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Q 005047 267 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQAL-QSQDRRKILLDVADALEANESLIKVENEADVAAAQ 345 (716)
Q Consensus 267 l~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~-~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~ 345 (716)
+.+|.+|+.++++..++ .+|+++++++|++||+.|+++ +.++|.++|++++++|++++++|++++.+|++++.
T Consensus 20 ~~~P~tg~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~ 93 (473)
T cd07082 20 VYSPIDGEVIGSVPALS------ALEILEAAETAYDAGRGWWPTMPLEERIDCLHKFADLLKENKEEVANLLMWEIGKTL 93 (473)
T ss_pred eECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcH
Confidence 36688999999998888 889999999999999999999 99999999999999999999999999988876554
Q ss_pred HhchhHHHHHHhhcCHHHHHHHHHHHHHHhccccc-cccccccccc--CCCeEEEEeecceeEEEEEcCC-Cch-hHHHH
Q 005047 346 EAGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTEL--ADGLILEKTSCPLGVLLIVFES-RPD-ALVQI 420 (716)
Q Consensus 346 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~--~~~~~~~~~~~PlGVv~~I~p~-~P~-~~~~~ 420 (716)
. ++. .|+...++.++++++..+. .+...+.... ..+...+.+++|+|||++|+|| +|. +.+++
T Consensus 94 ~----~a~--------~ev~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~ 161 (473)
T cd07082 94 K----DAL--------KEVDRTIDYIRDTIEELKRLDGDSLPGDWFPGTKGKIAQVRREPLGVVLAIGPFNYPLNLTVSK 161 (473)
T ss_pred H----HHH--------HHHHHHHHHHHHHHHHHHHhcCCcccccccccCCCceeEEEEecceEEEEECCcCcHHHHHHHH
Confidence 2 221 2445555555554432211 1222211100 1234567889999999999998 686 57899
Q ss_pred HHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CchHHHhhcCCCCccEEEeecCHHHHHHHH
Q 005047 421 ASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIK 498 (716)
Q Consensus 421 ~~~ALaaGNtvv~Kps~~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~ 498 (716)
+++||++||+||+|||+.+|.++.++++++++ + +|+|++|++++ +.++++.|..||++|+|+||||+++|+.|+
T Consensus 162 i~~AL~aGN~vilKps~~~~~~~~~l~~~l~~----aglp~~~~~vv~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~ 237 (473)
T cd07082 162 LIPALIMGNTVVFKPATQGVLLGIPLAEAFHD----AGFPKGVVNVVTGRGREIGDPLVTHGRIDVISFTGSTEVGNRLK 237 (473)
T ss_pred HHHHHHcCCEEEEECCCCCcHHHHHHHHHHHH----cCCCccceEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHH
Confidence 99999999999999999999999999999986 7 99999999996 556788888899999999999999999999
Q ss_pred Hhc-CCCEEEecCCcceEEEcCCCCHHHHHHHHHHhcCCCCC-ccccccceEEEeCccCChhhHHHHHHHHHhcCCE---
Q 005047 499 EST-KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMVETLLVHKDLACNGALNELVVELQHEGVG--- 573 (716)
Q Consensus 499 ~~a-~~~~~lElGGk~p~iV~~dADl~~Aa~~iv~~~f~n~g-~C~a~~~rv~V~~~i~dd~f~~~l~~~~~~~~~~--- 573 (716)
+.+ .+|+++|||||||+||++|||++.|++.+++++|.|+| .|+|+ +|+|||+++| |+|+++|.++++++.+.
T Consensus 238 ~~a~~~~~~lelgg~n~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~-~~v~v~~~i~-d~f~~~l~~~~~~~~~g~~~ 315 (473)
T cd07082 238 KQHPMKRLVLELGGKDPAIVLPDADLELAAKEIVKGALSYSGQRCTAI-KRVLVHESVA-DELVELLKEEVAKLKVGMPW 315 (473)
T ss_pred HHhCCCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHHhCCCcCCCC-eEEEEcHHHH-HHHHHHHHHHHhcCCCCCCC
Confidence 887 59999999999999999999999999999999999987 99999 9999999999 79999999999876321
Q ss_pred -------------------------------E-ecCcccccc-c-c-C-----CCCccccccccCceEEEEEeCCHHHHH
Q 005047 574 -------------------------------L-FGGPRASKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAI 613 (716)
Q Consensus 574 -------------------------------~-~g~~~~~~~-~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi 613 (716)
+ .|+....++ + | | +++++++||+||||++|++|+|+||||
T Consensus 316 ~~~~~~gp~i~~~~~~~~~~~~~~a~~~ga~~~~gg~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai 395 (473)
T cd07082 316 DNGVDITPLIDPKSADFVEGLIDDAVAKGATVLNGGGREGGNLIYPTLLDPVTPDMRLAWEEPFGPVLPIIRVNDIEEAI 395 (473)
T ss_pred CCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCeEEeeEEEecCCCCCHHHhCcCcCceEEEEEeCCHHHHH
Confidence 1 122221122 2 5 2 357899999999999999999999999
Q ss_pred HHHHhcCCCceeEEEccCHHHHHHHHHccCcceEEEcCCcCC-CCCCcccCcceeeccccccccccccchhcccEEEEEE
Q 005047 614 DHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRF-CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 692 (716)
Q Consensus 614 ~~aN~~~~GL~a~i~t~d~~~a~~~~~~~~~G~v~vN~~~~~-~~~~p~g~g~~sG~~~~~~~~~g~~gl~~ft~~k~v~ 692 (716)
+++|+++|||++||||+|.+++.++++++++|+|+||+++.. .+..||||.++||+| +++|++|+++||+.|+|+
T Consensus 396 ~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~pfGG~k~SG~g----~~~g~~~l~~~~~~k~i~ 471 (473)
T cd07082 396 ELANKSNYGLQASIFTKDINKARKLADALEVGTVNINSKCQRGPDHFPFLGRKDSGIG----TQGIGDALRSMTRRKGIV 471 (473)
T ss_pred HHHhCCCCCceEEEEeCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCcccccccC----CCChHHHHHHhhceeEEE
Confidence 999999999999999999999999999999999999997644 356899999999987 356999999999999987
Q ss_pred E
Q 005047 693 R 693 (716)
Q Consensus 693 ~ 693 (716)
+
T Consensus 472 ~ 472 (473)
T cd07082 472 I 472 (473)
T ss_pred E
Confidence 5
No 101
>cd07093 ALDH_F8_HMSADH Human aldehyde dehydrogenase family 8 member A1-like. In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone.
Probab=100.00 E-value=7.1e-70 Score=611.33 Aligned_cols=395 Identities=19% Similarity=0.185 Sum_probs=335.9
Q ss_pred HHhcCCcceeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhc
Q 005047 269 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAG 348 (716)
Q Consensus 269 ~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~g 348 (716)
+|.+|+.++++..++ .+++++++++|++||+.|+++|.++|.++|++++++|++++++|++++.+|++++..
T Consensus 3 ~P~t~~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~-- 74 (455)
T cd07093 3 NPATGEVLAKVPEGG------AAEVDAAVAAAKEAFPGWSRMSPAERARILHKVADLIEARADELALLESLDTGKPIT-- 74 (455)
T ss_pred CCCCCCEEEEEcCCC------HHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHH--
Confidence 577899999998888 899999999999999999999999999999999999999999999998877654421
Q ss_pred hhHHHHHHhhcCHHHHHHHHHHHHHHhccccc-ccccccccccCCCeEEEEeecceeEEEEEcCC-Cch-hHHHHHHHHH
Q 005047 349 YAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAI 425 (716)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~-~P~-~~~~~~~~AL 425 (716)
++. ..++...++.+++++..... .+...+ ...+...+.+++|+|||++|+|| ||. ..++++++||
T Consensus 75 --~~~-------~~ev~~~i~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~AL 142 (455)
T cd07093 75 --LAR-------TRDIPRAAANFRFFADYILQLDGESYP---QDGGALNYVLRQPVGVAGLITPWNLPLMLLTWKIAPAL 142 (455)
T ss_pred --HHH-------HHHHHHHHHHHHHHHHhHHHhCCcccc---CCCCceEEEEEEeeeEEEEECCCChHHHHHHHHHHHHH
Confidence 111 12555566666665543211 111111 11245567889999999999998 685 5789999999
Q ss_pred HhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CchHHHhhcCCCCccEEEeecCHHHHHHHHHhcC-
Q 005047 426 RSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK- 502 (716)
Q Consensus 426 aaGNtvv~Kps~~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a~- 502 (716)
++||+||+|||+.+|+++.++.+++++ + +|+|+||+++| +.+++..|..||++|+|+||||+.+|+.|++.+.
T Consensus 143 ~aGN~VIlkps~~~p~~~~~l~~~l~~----aglP~g~v~~v~g~~~~~~~~L~~~~~i~~V~ftGs~~~g~~v~~~aa~ 218 (455)
T cd07093 143 AFGNTVVLKPSEWTPLTAWLLAELANE----AGLPPGVVNVVHGFGPEAGAALVAHPDVDLISFTGETATGRTIMRAAAP 218 (455)
T ss_pred hcCCEEEeECCCcCcHHHHHHHHHHHh----cCCCccceEEEecCchHHHHHHhcCCCccEEEEECCHHHHHHHHHHHhh
Confidence 999999999999999999999999986 8 99999999996 5667888889999999999999999999998873
Q ss_pred --CCEEEecCCcceEEEcCCCCHHHHHHHHHHhcCCCCC-ccccccceEEEeCccCChhhHHHHHHHHHhcCC-------
Q 005047 503 --IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMVETLLVHKDLACNGALNELVVELQHEGV------- 572 (716)
Q Consensus 503 --~~~~lElGGk~p~iV~~dADl~~Aa~~iv~~~f~n~g-~C~a~~~rv~V~~~i~dd~f~~~l~~~~~~~~~------- 572 (716)
+|+++|||||||+||++|||++.|++.+++++|.|+| .|+++ +|||||+++| |+|+++|+++++++.+
T Consensus 219 ~~~~~~lelgG~~~~iV~~dAdl~~a~~~i~~~~~~~~GQ~C~a~-~~v~v~~~i~-d~f~~~l~~~~~~~~~g~p~~~~ 296 (455)
T cd07093 219 NLKPVSLELGGKNPNIVFADADLDRAVDAAVRSSFSNNGEVCLAG-SRILVQRSIY-DEFLERFVERAKALKVGDPLDPD 296 (455)
T ss_pred cccceEeecCCCCceEECCCCCHHHHHHHHHHHHHhccCCCcCCC-ceEEEcHHHH-HHHHHHHHHHHHhCCCCCCCCCC
Confidence 9999999999999999999999999999999999976 99999 9999999999 7999999999876521
Q ss_pred ---------------------------EE-ecCccc------cc-cc-c-C-----CCCccccccccCceEEEEEeCCHH
Q 005047 573 ---------------------------GL-FGGPRA------SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVR 610 (716)
Q Consensus 573 ---------------------------~~-~g~~~~------~~-~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~d 610 (716)
++ .|+... .+ ++ | | +++++++||+||||++|++|+|+|
T Consensus 297 ~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~~~~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~ 376 (455)
T cd07093 297 TEVGPLISKEHLEKVLGYVELARAEGATILTGGGRPELPDLEGGYFVEPTVITGLDNDSRVAQEEIFGPVVTVIPFDDEE 376 (455)
T ss_pred CCcCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCceECCEEEecCCCCChHHhCCCCCceEEEEeeCCHH
Confidence 11 233221 12 23 5 2 368899999999999999999999
Q ss_pred HHHHHHHhcCCCceeEEEccCHHHHHHHHHccCcceEEEcCCcCCCCCCcccCcceeeccccccccccccchhcccEEEE
Q 005047 611 AAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRW 690 (716)
Q Consensus 611 eAi~~aN~~~~GL~a~i~t~d~~~a~~~~~~~~~G~v~vN~~~~~~~~~p~g~g~~sG~~~~~~~~~g~~gl~~ft~~k~ 690 (716)
|||+++|+++|||++||||+|.++++++++++++|.|+||++....+..||||.+.||+| +++|++|+++|++.|+
T Consensus 377 eai~~~n~~~~gls~~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~G----~~~g~~~~~~~~~~k~ 452 (455)
T cd07093 377 EAIELANDTPYGLAAYVWTRDLGRAHRVARRLEAGTVWVNCWLVRDLRTPFGGVKASGIG----REGGDYSLEFYTELKN 452 (455)
T ss_pred HHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCCccCcCC----CCchHHHHHHHhceeE
Confidence 999999999999999999999999999999999999999998766677899999999986 3569999999999999
Q ss_pred EEE
Q 005047 691 ILR 693 (716)
Q Consensus 691 v~~ 693 (716)
+++
T Consensus 453 ~~~ 455 (455)
T cd07093 453 VCI 455 (455)
T ss_pred EeC
Confidence 853
No 102
>TIGR01238 D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain). This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase.
Probab=100.00 E-value=6e-70 Score=613.20 Aligned_cols=407 Identities=17% Similarity=0.184 Sum_probs=339.4
Q ss_pred HHHHHHHHHcCC---cEEEeeCCC-----cchHHHHhcC-CcceeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHH
Q 005047 243 VNAAYCAACAGI---PVVITSGFA-----MDSIIKVLEG-KRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQ 313 (716)
Q Consensus 243 l~aa~~a~~~gi---~v~I~~g~~-----~~~l~~~~tg-~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~ 313 (716)
+.+++...+.++ |-+| +|.. .-.+.+|.|+ +.++++...+ .+|+++|+++|++||+.|+++|..
T Consensus 24 ~~~~~~~~~~~~~~~~~~i-~g~~~~~~~~~~~~nP~t~~e~i~~~~~~~------~~dv~~av~~A~~a~~~W~~~~~~ 96 (500)
T TIGR01238 24 LEAQIHAWADKTWQAAPII-GHSYKADGEAQPVTNPADRRDIVGQVFHAN------LAHVQAAIDSAQQAFPTWNATPAK 96 (500)
T ss_pred HHHHHHHHhcCceecCceE-CCEEecCCCeEEeeCCCCCCeEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHH
Confidence 455666666553 3333 3321 1234788985 7889998888 899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhchhHHHHHHhhcCHHHHHHHHHHHHHHhcccccccccccccccCCC
Q 005047 314 DRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRILADMEEPIGQILKRTELADG 393 (716)
Q Consensus 314 ~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 393 (716)
+|.++|++++++|++++++|++++++|+++.. .++ ..++..+++.+++++...+.. . +
T Consensus 97 ~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~----~~a--------~~ev~~~i~~l~~~a~~~~~~---~-------~ 154 (500)
T TIGR01238 97 ERAAKLDRLADLLELHMPELMALCVREAGKTI----HNA--------IAEVREAVDFCRYYAKQVRDV---L-------G 154 (500)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCH----HHH--------HHHHHHHHHHHHHHHHHHHHh---c-------C
Confidence 99999999999999999999999887765432 122 247888888888887543210 0 1
Q ss_pred eEEEEeecceeEEEEEcCC-Cch-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-C
Q 005047 394 LILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-R 469 (716)
Q Consensus 394 ~~~~~~~~PlGVv~~I~p~-~P~-~~~~~~~~ALaaGNtvv~Kps~~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~ 469 (716)
...++|+|||++|+|| ||. +.++++++||++||+||+|||++||+++..+++++.+ + +|+|++|+|+| +
T Consensus 155 ---~~~~~P~GVV~~I~pwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~----aGlP~gvv~~v~g~~ 227 (500)
T TIGR01238 155 ---EFSVESRGVFVCISPWNFPLAIFTGQISAALAAGNTVIAKPAEQTSLIAYRAVELMQE----AGFPAGTIQLLPGRG 227 (500)
T ss_pred ---ceeccCcceEEEECCCchHHHHHHHHHHHHHHcCCEEEEeCCCCccHHHHHHHHHHHH----cCCCCCceEEEecCc
Confidence 1358999999999998 696 5689999999999999999999999999999999986 7 99999999996 4
Q ss_pred chHHHhhcCCCCccEEEeecCHHHHHHHHHhcC------CCEEEecCCcceEEEcCCCCHHHHHHHHHHhcCCCCC-ccc
Q 005047 470 EEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK------IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACN 542 (716)
Q Consensus 470 ~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a~------~~~~lElGGk~p~iV~~dADl~~Aa~~iv~~~f~n~g-~C~ 542 (716)
.+++..|..||+||+|+||||+.+|+.|++.++ +|+++|||||||+||++|||+|.|++.+++|+|.|+| .|+
T Consensus 228 ~~~~~~l~~~~~v~~V~ftGs~~~g~~v~~~aa~~~~~~~~v~lElGGknp~IV~~dAdld~Aa~~i~~~~f~nsGQ~C~ 307 (500)
T TIGR01238 228 ADVGAALTSDPRIAGVAFTGSTEVAQLINQTLAQREDAPVPLIAETGGQNAMIVDSTALPEQVVRDVLRSAFDSAGQRCS 307 (500)
T ss_pred chHHHHHhcCCCcCeEEEECCHHHHHHHHHHHhhcccCCceEEEecCCcCcEEECCCCCHHHHHHHHHHHHHhcCCCCCC
Confidence 577888889999999999999999999998662 6999999999999999999999999999999999987 999
Q ss_pred cccceEEEeCccCChhhHHHHHHHHHhcCC----------------------------------EEe----cCcc--ccc
Q 005047 543 AMVETLLVHKDLACNGALNELVVELQHEGV----------------------------------GLF----GGPR--ASK 582 (716)
Q Consensus 543 a~~~rv~V~~~i~dd~f~~~l~~~~~~~~~----------------------------------~~~----g~~~--~~~ 582 (716)
|+ +|+|||+++| |+|+++|+++++++++ .+. ++.+ ..+
T Consensus 308 a~-~rv~V~~~i~-d~f~~~L~~~~~~~~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~l~~~~~~~~~~~~~g 385 (500)
T TIGR01238 308 AL-RVLCVQEDVA-DRVLTMIQGAMQELKVGVPHLLTTDVGPVIDAEAKQNLLAHIEHMSQTQKKIAQLTLDDSRACQHG 385 (500)
T ss_pred CC-ceeEEcHhhH-HHHHHHHHHHHHhCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeeccCCCCCCCCC
Confidence 99 9999999999 7999999999887632 111 0100 012
Q ss_pred -cc-c-C---CCCccccccccCceEEEEEeC--CHHHHHHHHHhcCCCceeEEEccCHHHHHHHHHccCcceEEEcCCcC
Q 005047 583 -LL-Q-I---PETRLFHHEYNSMVCTVEIVD--DVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTR 654 (716)
Q Consensus 583 -~~-p-v---~~~~~~~eE~FGPVl~v~~~~--~~deAi~~aN~~~~GL~a~i~t~d~~~a~~~~~~~~~G~v~vN~~~~ 654 (716)
|+ | | +++.+++||+||||++|++|+ ++||||+++|+++|||++||||+|.+++.+|++++++|+|+||+...
T Consensus 386 ~f~~PTvl~~~~~~~~~eE~FgPvl~v~~~~~~~~deai~~~N~~~~gLs~~vfT~d~~~~~~~~~~l~~G~v~IN~~~~ 465 (500)
T TIGR01238 386 TFVAPTLFELDDIAELSEEVFGPVLHVVRYKARELDQIVDQINQTGYGLTMGVHSRIETTYRWIEKHARVGNCYVNRNQV 465 (500)
T ss_pred eeEcCEEEccCCchHhhCCCcCCEEEEEEeCCCCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhCCcceEEECCCCC
Confidence 23 5 3 467899999999999999998 79999999999999999999999999999999999999999998764
Q ss_pred CC--CCCcccCcceeeccccccccccccchhcccEEEE
Q 005047 655 FC--DGARFGLGAEVGISTSRIHARGPVGVEGLLTTRW 690 (716)
Q Consensus 655 ~~--~~~p~g~g~~sG~~~~~~~~~g~~gl~~ft~~k~ 690 (716)
.. +..||||.+.||+|. +++|++++++|++.|+
T Consensus 466 ~~~~~~~PfGG~k~SG~G~---~~gg~~~~~~~~~~k~ 500 (500)
T TIGR01238 466 GAVVGVQPFGGQGLSGTGP---KAGGPHYLYRLTQVQY 500 (500)
T ss_pred CCCCCCCCCCccccccCCC---ccCCHHHHHHHHhhcC
Confidence 32 447999999999862 3568999999999874
No 103
>cd07103 ALDH_F5_SSADH_GabD Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like. Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species.
Probab=100.00 E-value=1.6e-69 Score=608.06 Aligned_cols=395 Identities=18% Similarity=0.200 Sum_probs=337.4
Q ss_pred HHHhcCCcceeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHh
Q 005047 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 347 (716)
Q Consensus 268 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~ 347 (716)
.+|.+|+.++++...+ .+++++++++|++||+.|+++|.++|.++|+++++.|+++.++|++++..|++++..
T Consensus 2 ~~P~tg~~i~~~~~~~------~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~- 74 (451)
T cd07103 2 INPATGEVIGEVPDAG------AADADAAIDAAAAAFKTWRKTTARERAAILRRWADLIRERAEDLARLLTLEQGKPLA- 74 (451)
T ss_pred cCCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHH-
Confidence 3578899999998888 889999999999999999999999999999999999999999999998877654432
Q ss_pred chhHHHHHHhhcCHHHHHHHHHHHHHHhcccc-cccccccccccCCCeEEEEeecceeEEEEEcCC-Cch-hHHHHHHHH
Q 005047 348 GYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 424 (716)
Q Consensus 348 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~-~P~-~~~~~~~~A 424 (716)
++ ..|+...++.+++++...+ ..+...+.. ..+...+.+++|+|||++|+|| ||. ..++++++|
T Consensus 75 ---~a--------~~ev~~~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~A 141 (451)
T cd07103 75 ---EA--------RGEVDYAASFLEWFAEEARRIYGRTIPSP--APGKRILVIKQPVGVVAAITPWNFPAAMITRKIAPA 141 (451)
T ss_pred ---HH--------HHHHHHHHHHHHHHHHHHHHhcCcccccC--CCCcceEEEEeeceEEEEECCCchHHHHHHHHHHHH
Confidence 22 2356666677766654322 223222211 1244567889999999999998 796 467999999
Q ss_pred HHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CchHHHhhcCCCCccEEEeecCHHHHHHHHHhc-
Q 005047 425 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST- 501 (716)
Q Consensus 425 LaaGNtvv~Kps~~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a- 501 (716)
|++||+||+|||+.+|.++..+++++++ + +|+|++|+|++ +.+.++.|..|++||+|+||||+.+|+.|++.+
T Consensus 142 L~aGN~VIlKps~~~~~~~~~l~~~l~~----aglP~g~v~~v~~~~~~~~~~l~~~~~vd~V~ftGs~~~g~~v~~~aa 217 (451)
T cd07103 142 LAAGCTVVLKPAEETPLSALALAELAEE----AGLPAGVLNVVTGSPAEIGEALCASPRVRKISFTGSTAVGKLLMAQAA 217 (451)
T ss_pred HHcCCEEEEECCccCcHHHHHHHHHHHH----cCCCcccEEEEecCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHH
Confidence 9999999999999999999999999986 7 99999999996 556778888899999999999999999998876
Q ss_pred --CCCEEEecCCcceEEEcCCCCHHHHHHHHHHhcCCCCC-ccccccceEEEeCccCChhhHHHHHHHHHhcCC------
Q 005047 502 --KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMVETLLVHKDLACNGALNELVVELQHEGV------ 572 (716)
Q Consensus 502 --~~~~~lElGGk~p~iV~~dADl~~Aa~~iv~~~f~n~g-~C~a~~~rv~V~~~i~dd~f~~~l~~~~~~~~~------ 572 (716)
.+|+++|+|||||+||++|||++.|++.+++|+|.|+| .|+++ +|+|||+++| |+|+++|+++++++.+
T Consensus 218 ~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~-~~v~V~~~i~-~~f~~~l~~~~~~~~~g~~~~~ 295 (451)
T cd07103 218 DTVKRVSLELGGNAPFIVFDDADLDKAVDGAIASKFRNAGQTCVCA-NRIYVHESIY-DEFVEKLVERVKKLKVGNGLDE 295 (451)
T ss_pred hcCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHHhcCCCCCCC-eeEEEcHHHH-HHHHHHHHHHHHhccCCCCCCC
Confidence 38999999999999999999999999999999999987 99999 9999999999 7999999999887531
Q ss_pred ----------------------------EE-ecCccc--cc-cc-c-C-----CCCccccccccCceEEEEEeCCHHHHH
Q 005047 573 ----------------------------GL-FGGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAI 613 (716)
Q Consensus 573 ----------------------------~~-~g~~~~--~~-~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi 613 (716)
++ .|+... .+ ++ | | +++++++||+||||++|++|+|+||||
T Consensus 296 ~~~~gp~i~~~~~~~~~~~i~~a~~~ga~~l~gg~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai 375 (451)
T cd07103 296 GTDMGPLINERAVEKVEALVEDAVAKGAKVLTGGKRLGLGGYFYEPTVLTDVTDDMLIMNEETFGPVAPIIPFDTEDEVI 375 (451)
T ss_pred CCCCCcCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCcEECCEEeeCCCCcCHHHhCCCCCceEEEEEECCHHHHH
Confidence 11 132221 12 33 5 2 357899999999999999999999999
Q ss_pred HHHHhcCCCceeEEEccCHHHHHHHHHccCcceEEEcCCcCCCCCCcccCcceeeccccccccccccchhcccEEEEEE
Q 005047 614 DHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 692 (716)
Q Consensus 614 ~~aN~~~~GL~a~i~t~d~~~a~~~~~~~~~G~v~vN~~~~~~~~~p~g~g~~sG~~~~~~~~~g~~gl~~ft~~k~v~ 692 (716)
+++|+++|||++||||+|.++++++++++++|.|+||++....+..||||.++||+| +++|++|+++||+.|++.
T Consensus 376 ~~~n~~~~gl~~~i~t~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~SG~G----~~~g~~~~~~~~~~k~v~ 450 (451)
T cd07103 376 ARANDTPYGLAAYVFTRDLARAWRVAEALEAGMVGINTGLISDAEAPFGGVKESGLG----REGGKEGLEEYLETKYVS 450 (451)
T ss_pred HHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCCccCcCC----ccchHHHHHHHhceeEEe
Confidence 999999999999999999999999999999999999998766677899999999876 356999999999999885
No 104
>cd07104 ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins. ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences.
Probab=100.00 E-value=2.5e-69 Score=603.29 Aligned_cols=377 Identities=21% Similarity=0.241 Sum_probs=319.2
Q ss_pred hHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhchhHHHHHHhhcCHHHHHHHHHHH
Q 005047 292 GAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSI 371 (716)
Q Consensus 292 ~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 371 (716)
|+++++++|++||+.|+++|.++|.++|++++++|++|+++|++++++|++++.. ++ ..|+..+++.+
T Consensus 1 ~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~----~~--------~~ei~~~~~~l 68 (431)
T cd07104 1 DVDRAYAAAAAAQKAWAATPPQERAAILRKAAEILEERRDEIADWLIRESGSTRP----KA--------AFEVGAAIAIL 68 (431)
T ss_pred CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH----HH--------HHHHHHHHHHH
Confidence 5789999999999999999999999999999999999999999998877654321 21 23566677777
Q ss_pred HHHhcccc-cccccccccccCCCeEEEEeecceeEEEEEcCC-Cch-hHHHHHHHHHHhCCEEEEeCCcchHHH-HHHHH
Q 005047 372 RILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRS-NAILH 447 (716)
Q Consensus 372 ~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~-~P~-~~~~~~~~ALaaGNtvv~Kps~~tp~t-~~~l~ 447 (716)
++++...+ ..+...+.. ..+...+.+++|+|||++|+|| ||. ..++++++||++||+||+|||+.||.+ +..+.
T Consensus 69 ~~~~~~~~~~~~~~~~~~--~~g~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~l~ 146 (431)
T cd07104 69 REAAGLPRRPEGEILPSD--VPGKESMVRRVPLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDSRTPVTGGLLIA 146 (431)
T ss_pred HHHHHHHHHhcCccccCC--CCCceeEEEEeeeeeEEEECCCCcHHHHHHHHHHHHHHcCCeEEeeCCCCChHHHHHHHH
Confidence 77654432 223222211 1344567889999999999998 685 567999999999999999999999998 56788
Q ss_pred HHHHHhcccc-cCcCceEEecC-CchHHHhhcCCCCccEEEeecCHHHHHHHHHhcC---CCEEEecCCcceEEEcCCCC
Q 005047 448 KVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK---IPVLGHADGICHVYVDKSAN 522 (716)
Q Consensus 448 ~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a~---~~~~lElGGk~p~iV~~dAD 522 (716)
+++.+ + +|+|++|+|++ +.+++..|..||++|+|+||||+.+|+.|+++++ +|+++|||||||+||++|||
T Consensus 147 ~~l~~----aGlP~gvv~~v~g~~~~~~~~L~~~~~i~~V~ftGs~~~g~~v~~~aa~~~~~~~lelgG~~~~iV~~dad 222 (431)
T cd07104 147 EIFEE----AGLPKGVLNVVPGGGSEIGDALVEHPRVRMISFTGSTAVGRHIGELAGRHLKKVALELGGNNPLIVLDDAD 222 (431)
T ss_pred HHHHH----cCCCcccEEEeeCCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCcEEEEcCCCCeEEECCCCC
Confidence 88876 8 99999999996 5567888888999999999999999999998773 89999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCC-ccccccceEEEeCccCChhhHHHHHHHHHhcCC-----------------------------
Q 005047 523 LDVAKNIVIDAKIDYPA-ACNAMVETLLVHKDLACNGALNELVVELQHEGV----------------------------- 572 (716)
Q Consensus 523 l~~Aa~~iv~~~f~n~g-~C~a~~~rv~V~~~i~dd~f~~~l~~~~~~~~~----------------------------- 572 (716)
++.|++.+++|+|.|+| .|+++ +|+|||+++| |+|+++|+++++++.+
T Consensus 223 l~~aa~~i~~~~~~~~GQ~C~a~-~~v~v~~~i~-~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a 300 (431)
T cd07104 223 LDLAVSAAAFGAFLHQGQICMAA-GRILVHESVY-DEFVEKLVAKAKALPVGDPRDPDTVIGPLINERQVDRVHAIVEDA 300 (431)
T ss_pred HHHHHHHHHHHHHhcCCCCcccC-cEEEEcHHHH-HHHHHHHHHHHHhcCcCCCCCCCCccCcccCHHHHHHHHHHHHHH
Confidence 99999999999999987 99999 9999999999 7999999999887632
Q ss_pred -----EE-ecCccccccc-c-C-----CCCccccccccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEccCHHHHHHHH
Q 005047 573 -----GL-FGGPRASKLL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFL 639 (716)
Q Consensus 573 -----~~-~g~~~~~~~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~i~t~d~~~a~~~~ 639 (716)
++ .|+.....++ | | +++++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.+++
T Consensus 301 ~~~G~~~~~gg~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~ 380 (431)
T cd07104 301 VAAGARLLTGGTYEGLFYQPTVLSDVTPDMPIFREEIFGPVAPVIPFDDDEEAVELANDTEYGLSAAVFTRDLERAMAFA 380 (431)
T ss_pred HHCCCEEEeCCCCCCceECCEEeecCCCCChhhhCcCcCCeEEEEEECCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHH
Confidence 11 1222211123 5 2 35789999999999999999999999999999999999999999999999999
Q ss_pred HccCcceEEEcCCcCCC-CCCcccCcceeeccccccccccccchhcccEEEEEE
Q 005047 640 CQVDSAAVFHNASTRFC-DGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 692 (716)
Q Consensus 640 ~~~~~G~v~vN~~~~~~-~~~p~g~g~~sG~~~~~~~~~g~~gl~~ft~~k~v~ 692 (716)
+++++|.|+||+++... +..||||.+.||+| +++|++|+++||+.|+|+
T Consensus 381 ~~l~~g~v~iN~~~~~~~~~~pfgG~~~SG~g----~~~g~~~l~~~~~~k~~~ 430 (431)
T cd07104 381 ERLETGMVHINDQTVNDEPHVPFGGVKASGGG----RFGGPASLEEFTEWQWIT 430 (431)
T ss_pred HhcCcCeEEECCCCCCCCCCCCCCCcccccCC----ccchHHHHHHhhceeEEe
Confidence 99999999999986553 67899999999865 356999999999999985
No 105
>cd07128 ALDH_MaoC-N N-terminal domain of the monoamine oxidase C dehydratase. The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH.
Probab=100.00 E-value=1.1e-69 Score=610.94 Aligned_cols=391 Identities=18% Similarity=0.200 Sum_probs=320.8
Q ss_pred HHHhcCCcceeEEecCCccccchhhHHHHHHHHHHH-HHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Q 005047 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARES-SRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 346 (716)
Q Consensus 268 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a-~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~ 346 (716)
.+|.||+.++++.. . .+|+++|+++|++| |+.|+++|.++|+++|++++++|++|+++|+++ ++|+++..
T Consensus 20 ~nP~tg~~~~~~~~-~------~~dv~~Av~~A~~A~~~~W~~~~~~~Ra~~L~~~a~~l~~~~~~la~l-~~e~Gkp~- 90 (513)
T cd07128 20 HDAVTGEVVARVSS-E------GLDFAAAVAYAREKGGPALRALTFHERAAMLKALAKYLMERKEDLYAL-SAATGATR- 90 (513)
T ss_pred ECCCCCCEEEEEcC-C------HHHHHHHHHHHHHhhhchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHH-HHHcCCCH-
Confidence 56889999999875 4 46999999999998 799999999999999999999999999999985 66654432
Q ss_pred hchhHHHHHHhhcCHHHHHHHHHHHHHHhcccccc---------cccccccccCCC-eEEEEeecc-eeEEEEEcCC-Cc
Q 005047 347 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEPI---------GQILKRTELADG-LILEKTSCP-LGVLLIVFES-RP 414 (716)
Q Consensus 347 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------g~~~~~~~~~~~-~~~~~~~~P-lGVv~~I~p~-~P 414 (716)
.++ ..|+...++.+++++++.+.. ++..+.. ..+ ...+++++| +|||++|+|| ||
T Consensus 91 ---~ea--------~~Ev~~~~~~~~~~a~~a~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~~GVv~~I~pwN~P 157 (513)
T cd07128 91 ---RDS--------WIDIDGGIGTLFAYASLGRRELPNAHFLVEGDVEPLS--KDGTFVGQHILTPRRGVAVHINAFNFP 157 (513)
T ss_pred ---HHH--------HHHHHHHHHHHHHHHHHHHhhccccccccCCcccccC--CCccccceEEEEecccEEEEECCcccH
Confidence 122 236666777777766543221 2221110 111 134677999 5999999998 69
Q ss_pred h-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CchHHHhhcCCCCccEEEeecCH
Q 005047 415 D-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSN 491 (716)
Q Consensus 415 ~-~~~~~~~~ALaaGNtvv~Kps~~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~ 491 (716)
. +++++++|||++||+||+|||+.||+++.+|++++.++ . ||+|++|+|+| +.++++.+ +.+|+|+||||+
T Consensus 158 ~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~ea---G~lP~gv~~~v~g~~~~~~~~l---~~~d~v~fTGS~ 231 (513)
T cd07128 158 VWGMLEKFAPALLAGVPVIVKPATATAYLTEAVVKDIVES---GLLPEGALQLICGSVGDLLDHL---GEQDVVAFTGSA 231 (513)
T ss_pred HHHHHHHHHHHHHcCCEEEEECCCCCCHHHHHHHHHHHHh---CCCCCCcEEEecCChHHHhccc---CCCCEEEEECCH
Confidence 5 57899999999999999999999999999999999872 3 79999999996 33344333 469999999999
Q ss_pred HHHHHHHHhc-----CCCEEEecCCcceEEEcCCCC-----HHHHHHHHHHhcCCCCC-ccccccceEEEeCccCChhhH
Q 005047 492 KLVSQIKEST-----KIPVLGHADGICHVYVDKSAN-----LDVAKNIVIDAKIDYPA-ACNAMVETLLVHKDLACNGAL 560 (716)
Q Consensus 492 ~~g~~i~~~a-----~~~~~lElGGk~p~iV~~dAD-----l~~Aa~~iv~~~f~n~g-~C~a~~~rv~V~~~i~dd~f~ 560 (716)
++|+.|++.+ .+|++||||||||+||++||| +|.|++.+++++|.|+| +|+++ +|+|||++|| |+|+
T Consensus 232 ~~G~~i~~~a~~a~~~~~~~lElGGknp~IV~~DAd~~~~dld~aa~~iv~~~f~~aGQ~C~a~-~rv~V~~~i~-d~f~ 309 (513)
T cd07128 232 ATAAKLRAHPNIVARSIRFNAEADSLNAAILGPDATPGTPEFDLFVKEVAREMTVKAGQKCTAI-RRAFVPEARV-DAVI 309 (513)
T ss_pred HHHHHHHHHhhhhccCceEEEeccCcCcEEECCCCCcchhhHHHHHHHHHHHHHHhcCCcccCC-ceEEEehHHH-HHHH
Confidence 9999999863 389999999999999999999 99999999999999987 99999 9999999999 7999
Q ss_pred HHHHHHHHhcCC---------------------------------EE-ecCcc---------ccc-cc-c-C-----C--
Q 005047 561 NELVVELQHEGV---------------------------------GL-FGGPR---------ASK-LL-Q-I-----P-- 587 (716)
Q Consensus 561 ~~l~~~~~~~~~---------------------------------~~-~g~~~---------~~~-~~-p-v-----~-- 587 (716)
++|+++++++.+ ++ .|+.. ..+ |+ | | +
T Consensus 310 ~~l~~~~~~l~~G~p~~~~~~lGpli~~~~~~~i~~~i~~a~~~A~vl~GG~~~~~~~~~~~~~g~~~~PTvl~~v~~~~ 389 (513)
T cd07128 310 EALKARLAKVVVGDPRLEGVRMGPLVSREQREDVRAAVATLLAEAEVVFGGPDRFEVVGADAEKGAFFPPTLLLCDDPDA 389 (513)
T ss_pred HHHHHHHHhcccCCCccCCCCcCCCCCHHHHHHHHHHHHHHHhCCEEEECCCccccccCCCCCCCEEECCEEEeccCCcc
Confidence 999999988631 11 24432 123 33 5 2 2
Q ss_pred CCccccccccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEccCHHHHHHHHHccC--cceEEEcCCcC---------CC
Q 005047 588 ETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVD--SAAVFHNASTR---------FC 656 (716)
Q Consensus 588 ~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~i~t~d~~~a~~~~~~~~--~G~v~vN~~~~---------~~ 656 (716)
.+++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++++++++ +|+||||+... ..
T Consensus 390 ~~~i~~eE~FGPVl~V~~~~~~deai~~aN~~~~gL~asvft~d~~~~~~~~~~l~~~~G~v~IN~~~~~~~~~~~~~~~ 469 (513)
T cd07128 390 ATAVHDVEAFGPVATLMPYDSLAEAIELAARGRGSLVASVVTNDPAFARELVLGAAPYHGRLLVLNRDSAKESTGHGSPL 469 (513)
T ss_pred cchHHhCCCcCCeEEEEeeCCHHHHHHHHhcCCCCeeEEEEeCCHHHHHHHHHHHHhhCCEEEEcCCccccccccccCCC
Confidence 26899999999999999999999999999999999999999999999999999997 99999998641 23
Q ss_pred CCCcccCcceeecccccccc-ccccchhcccEEEEEE
Q 005047 657 DGARFGLGAEVGISTSRIHA-RGPVGVEGLLTTRWIL 692 (716)
Q Consensus 657 ~~~p~g~g~~sG~~~~~~~~-~g~~gl~~ft~~k~v~ 692 (716)
+.+||||.+.||+|+ + +|.+|+++|++.|+|.
T Consensus 470 ~~~pfGG~k~SG~G~----~~gg~~~l~~~~~~k~v~ 502 (513)
T cd07128 470 PQLVHGGPGRAGGGE----ELGGLRGVKHYMQRTAVQ 502 (513)
T ss_pred CCCCCCCcccCCCCc----ccccHHHHHHhheeeeee
Confidence 568999999999863 3 3689999999999874
No 106
>KOG2456 consensus Aldehyde dehydrogenase [Energy production and conversion]
Probab=100.00 E-value=6.3e-70 Score=557.48 Aligned_cols=382 Identities=20% Similarity=0.228 Sum_probs=330.2
Q ss_pred hHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhchhHHHHHHhhcCHHHHHHHHHHH
Q 005047 292 GAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSI 371 (716)
Q Consensus 292 ~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 371 (716)
.+++.++++|.+|.+-++.|.+.|.+.|+++..++++|.++|.+++.+|+.+.+. ++...++....+++.++++.+
T Consensus 3 ~~~~~v~~~R~~F~sGrtr~~efR~~QL~~L~r~i~e~e~~i~~Al~~DL~k~~~----es~~~Ev~~~~~~i~~~l~~L 78 (477)
T KOG2456|consen 3 AISETVRRLRLAFSSGRTRPLEFRKQQLEALYRMIQENEKEIIEALAADLHKPEL----ESYLNEVGYVLNEIRYALENL 78 (477)
T ss_pred cHHHHHHHHHHHHhcCCcCChHHHHHHHHHHHHHHHhhHHHHHHHHHHHhccchh----HHHHHHHHHHHHHHHHHHHhh
Confidence 3456689999999999999999999999999999999999999999999987654 456677777888999999999
Q ss_pred HHHhcccccccccccccccCCCeEEEEeecceeEEEEEcCC-Cch-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHH
Q 005047 372 RILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKV 449 (716)
Q Consensus 372 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~-~P~-~~~~~~~~ALaaGNtvv~Kps~~tp~t~~~l~~l 449 (716)
..|....+.. .... +. -.+.+++.+|+|||++|+|| ||. +++.++++|||||||||+||||.+|.++..|+++
T Consensus 79 ~~wv~~~~v~-~~~~--t~--~dk~~I~~~p~GvVLiI~~wNyP~~L~l~PligAiAAGN~VVlKPSEls~n~a~~lakl 153 (477)
T KOG2456|consen 79 PEWVKPEPVK-KSFL--TF--LDKAYIEKEPLGVVLIIGPWNYPLNLTLVPLIGAIAAGNAVVLKPSELSPNTAKLLAKL 153 (477)
T ss_pred HHhccccccC-cccc--cc--cCceeEEecCCceEEEEccCCCcceeehhhhhhhhhcCCEEEechhhcChhHHHHHHHH
Confidence 9987533211 1111 11 12467889999999999999 695 6789999999999999999999999999999999
Q ss_pred HHHhcccccCcCceEEecC-CchHHHhhcCCCCccEEEeecCHHHHHHHHHhcC---CCEEEecCCcceEEEcCCCCHHH
Q 005047 450 ITSAIPDTVGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK---IPVLGHADGICHVYVDKSANLDV 525 (716)
Q Consensus 450 ~~~al~~alP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a~---~~~~lElGGk~p~iV~~dADl~~ 525 (716)
+-+ +|+++++.||.| .++++++|.+ ++|+|+||||+.+||.||.+|+ +||+||||||+|++|++|||++-
T Consensus 154 lp~----Yld~~~~~VV~Ggv~ETt~LL~~--rfD~IfyTGsp~VgkIim~aAaKhLTPvtLELGGKsP~~vd~~~d~~i 227 (477)
T KOG2456|consen 154 LPQ----YLDQDLIRVVNGGVPETTELLKQ--RFDHIFYTGSPRVGKIIMAAAAKHLTPVTLELGGKSPCYVDKNCDLKI 227 (477)
T ss_pred HHH----hcCcceEEEecCCCchHHHHHHh--hccEEEecCCchHHHHHHHHHHhcCCcEEEEcCCCCCeeecCCcCHHH
Confidence 986 699999999995 6888999974 7999999999999999998883 89999999999999999999999
Q ss_pred HHHHHHHhcCCCCC-ccccccceEEEeCccCChhhHHHHHHHHHhc-CC----------------------------E-E
Q 005047 526 AKNIVIDAKIDYPA-ACNAMVETLLVHKDLACNGALNELVVELQHE-GV----------------------------G-L 574 (716)
Q Consensus 526 Aa~~iv~~~f~n~g-~C~a~~~rv~V~~~i~dd~f~~~l~~~~~~~-~~----------------------------~-~ 574 (716)
|+++|+||++.|+| +|+|+ ++|+++.+++ +.+++++...+++. |- + +
T Consensus 228 a~~RI~~gk~~N~GQtCvap-DYiL~~k~~~-~kli~alk~~l~eFYG~n~~eS~d~sRiIn~~hf~Rl~~ll~~~~kv~ 305 (477)
T KOG2456|consen 228 AARRIAWGKWMNSGQTCVAP-DYILCSKSIQ-PKLIDALKSTLKEFYGENPKESKDLSRIINQRHFQRLSALLDETGKVA 305 (477)
T ss_pred HHHHHHHHhhccCCCeeccC-CeEEecHhhh-HHHHHHHHHHHHHHhCCCccccccHHHHhhHHHHHHHHHHhcCCCcee
Confidence 99999999999987 99999 9999999999 89999998888764 10 0 1
Q ss_pred ecCccc--cccc-c-C-----CCCccccccccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEccCHHHHHHHHHccCcc
Q 005047 575 FGGPRA--SKLL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSA 645 (716)
Q Consensus 575 ~g~~~~--~~~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~i~t~d~~~a~~~~~~~~~G 645 (716)
.||+.. ..++ | | .++++|+||+|||||||+.|+|+||+|+.+|..+.+|++|+||+|.+...||..++.+|
T Consensus 306 ~Gg~~d~~d~~I~PTIL~DV~~~~p~M~eEIFGPiLPIi~v~~l~Eai~~In~~eKPLa~Y~Fs~n~~~vkr~l~~tsSG 385 (477)
T KOG2456|consen 306 IGGESDESDRYIAPTILLDVPEDSPVMQEEIFGPILPIITVQSLDEAINFINEREKPLALYIFSNNEKLVKRFLTETSSG 385 (477)
T ss_pred cCCccchhhcccCCeEEecCCCCChhhhhhhccCccceeEhhhHHHHHHHHhcCCCceEEEEecCCHHHHHHHHHhccCC
Confidence 233221 1233 4 2 35799999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEcCCcCC--CCCCcccCcceeeccccccccccccchhcccEEEEEEEc
Q 005047 646 AVFHNASTRF--CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRG 694 (716)
Q Consensus 646 ~v~vN~~~~~--~~~~p~g~g~~sG~~~~~~~~~g~~gl~~ft~~k~v~~~ 694 (716)
.|.+|+...+ ...+||||.++||+| +++|.+|++.|++.|++..+
T Consensus 386 gvt~ND~i~H~~~~~lPFGGVG~SGmG----~YhGK~sFdTFSH~k~~l~r 432 (477)
T KOG2456|consen 386 GVTVNDVIMHVTLDSLPFGGVGESGMG----RYHGKFSFDTFSHEKSCLLR 432 (477)
T ss_pred CeeecceEEEEEeeccCcCCcCccccc----cccccccccccccchhhhhc
Confidence 9999996433 567899999999986 46799999999999998764
No 107
>TIGR02278 PaaN-DH phenylacetic acid degradation protein paaN. This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species.
Probab=100.00 E-value=1.9e-69 Score=625.31 Aligned_cols=395 Identities=17% Similarity=0.167 Sum_probs=325.0
Q ss_pred HHHHhcCCcceeEEecCCccccchhhHHHHHHHHHHH-HHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Q 005047 267 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARES-SRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQ 345 (716)
Q Consensus 267 l~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a-~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~ 345 (716)
+.+|.+|+.++++..++ . |+++|+++|++| |+.|+++|..+|+++|++++++|++|+++|++ +++|.||..
T Consensus 19 v~nP~tg~~i~~~~~~~------~-dv~~Av~~A~~aa~~~W~~~~~~eR~~~L~~~a~~l~~~~~ela~-~~~e~GK~~ 90 (663)
T TIGR02278 19 VRDASTGEVLARVTSEG------L-DVAAAVAWAREVGGPALRALTFHERARMLKALAQYLSERKEALYA-LAATTGATR 90 (663)
T ss_pred ccCCCCCCEEEEEcCCc------H-HHHHHHHHHHHhcchhhhcCCHHHHHHHHHHHHHHHHHHHHHHHH-HHHHcCCCH
Confidence 36788999999987666 4 899999999996 99999999999999999999999999999998 465544332
Q ss_pred HhchhHHHHHHhhcCHHHHHHHHHHHHHHhccccc---------ccccccccccCCCeEEEEeecce-eEEEEEcCC-Cc
Q 005047 346 EAGYAKSLVSRLALKPGKISSLAKSIRILADMEEP---------IGQILKRTELADGLILEKTSCPL-GVLLIVFES-RP 414 (716)
Q Consensus 346 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~g~~~~~~~~~~~~~~~~~~~Pl-GVv~~I~p~-~P 414 (716)
.++ ..|+..+++.+++++...+. .|+..+.. ...+...+++|+|+ |||++|+|| ||
T Consensus 91 ----~~a--------~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~P~~Gvv~~I~pwN~P 157 (663)
T TIGR02278 91 ----RDN--------WVDIDGGIGTLFTYSSLGRRELPDANLIPEDEFEPLS-KDGSFQGRHILTPKGGVAVQINAFNFP 157 (663)
T ss_pred ----HHH--------HHHHHHHHHHHHHHHHhhhhhccccccccCCceeccC-CCCccceEEEEEeCCceEEEEcCCchH
Confidence 122 24777888888888764432 13322211 01122467889998 999999999 69
Q ss_pred h-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecCCchHHHhhcCCCCccEEEeecCHH
Q 005047 415 D-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNK 492 (716)
Q Consensus 415 ~-~~~~~~~~ALaaGNtvv~Kps~~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~v~~v~fTGs~~ 492 (716)
+ ++.++++|||++||+||+|||+.||+++.+|++++.++ . +|+|+||+|+|. .++++..++.+|+|+||||++
T Consensus 158 ~~~~~~~~~~ALaaGN~Vv~KPs~~tp~~~~~l~~~~~~a---G~lP~gv~~~v~g~--~~~~~~~~~~~~~V~FTGS~~ 232 (663)
T TIGR02278 158 VWGLLEKFAPAFLAGVPTLAKPATPTAYVAEALVRTMVES---GLLPEGSLQLICGS--AGDLLDHLDHRDVVAFTGSAA 232 (663)
T ss_pred HHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHh---CCCCCCcEEEEeCC--hHHHHhcCCCCCEEEEECCHH
Confidence 5 57899999999999999999999999999999999872 3 899999999963 233444446789999999999
Q ss_pred HHHHHHHhc-----CCCEEEecCCcceEEEcCCCC-----HHHHHHHHHHhcCCCCC-ccccccceEEEeCccCChhhHH
Q 005047 493 LVSQIKEST-----KIPVLGHADGICHVYVDKSAN-----LDVAKNIVIDAKIDYPA-ACNAMVETLLVHKDLACNGALN 561 (716)
Q Consensus 493 ~g~~i~~~a-----~~~~~lElGGk~p~iV~~dAD-----l~~Aa~~iv~~~f~n~g-~C~a~~~rv~V~~~i~dd~f~~ 561 (716)
+|++|++.+ .+|++||||||||+||++||| +|.|++.+++|+|.|+| .|+|+ +|+|||+++| |+|++
T Consensus 233 ~G~~i~~~aaaa~~~~~~~lELGGk~p~IV~~dAd~~~~dl~~aa~~i~~~~f~~sGQ~C~a~-~rv~V~~~i~-d~f~~ 310 (663)
T TIGR02278 233 TADRLRAHPNVLERGIRFNAEADSLNAAILGEDATPDEPEFDLFAQEIVRELTIKAGQKCTAI-RRVIVPKALL-EAVLK 310 (663)
T ss_pred HHHHHHHhHhHHhcCceEEEEcCCCCeEEEcCCCCccchhHHHHHHHHHHHHHhcCCCCccCC-ceEEEeHHHH-HHHHH
Confidence 999999853 389999999999999999999 99999999999999987 99999 9999999999 79999
Q ss_pred HHHHHHHhcCC----------------------------------EE-ecCccc-cc-cc-c-C-----CCC-ccccccc
Q 005047 562 ELVVELQHEGV----------------------------------GL-FGGPRA-SK-LL-Q-I-----PET-RLFHHEY 596 (716)
Q Consensus 562 ~l~~~~~~~~~----------------------------------~~-~g~~~~-~~-~~-p-v-----~~~-~~~~eE~ 596 (716)
+|+++++++.+ ++ .|+... .+ |+ | | ++| ++++||+
T Consensus 311 ~l~~~~~~l~vG~p~~~~t~~Gpli~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~~g~~~~PTvl~~~~~~~~~i~~eE~ 390 (663)
T TIGR02278 311 ALQARLAKVVLGDPREEGVDMGPLVSLEQRADVEAAVAALLAAGAEVRLGGPGRLDGAFFPPTLLLAEDPWAGAVHATEA 390 (663)
T ss_pred HHHHHHHhccCCCccccCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCCeeEccEEEeeCCcchhhHHhccc
Confidence 99999987631 12 244321 13 33 6 2 244 7899999
Q ss_pred cCceEEEEEeCCHHHHHHHHHhcCCCceeEEEccCHHHHHHHHHcc--CcceEEE-cCCc--------CCCCCCcccCcc
Q 005047 597 NSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQV--DSAAVFH-NAST--------RFCDGARFGLGA 665 (716)
Q Consensus 597 FGPVl~v~~~~~~deAi~~aN~~~~GL~a~i~t~d~~~a~~~~~~~--~~G~v~v-N~~~--------~~~~~~p~g~g~ 665 (716)
||||++|++|+|+||||+++|+++|||++||||+|.++++++++++ ++|+||| |.+. ...+.+||||.+
T Consensus 391 FGPVl~V~~~~~~~eai~~aN~~~~gL~a~vft~d~~~~~~~~~~l~~~~G~v~InN~~~~~~~~~~~~~~~~~pfGG~k 470 (663)
T TIGR02278 391 FGPVATFFPYGDRAEAARLAARGGGSLVATLATSDPEEARQFILGLAPYHGRLHILNRDDAAESTGHGSPLPRLLHGGPG 470 (663)
T ss_pred cCCeEEEEeeCCHHHHHHHHHcCCCCceEEEEeCCHHHHHHHHHHHHhhCCEEEECCCcccccccCCCCCCCCCCCCCCc
Confidence 9999999999999999999999999999999999999999999999 8999999 6421 112568999999
Q ss_pred eeecccccccc-ccccchhcccEEEEEEE
Q 005047 666 EVGISTSRIHA-RGPVGVEGLLTTRWILR 693 (716)
Q Consensus 666 ~sG~~~~~~~~-~g~~gl~~ft~~k~v~~ 693 (716)
.||+|+ + +|.+++++|++.|+|..
T Consensus 471 ~SG~G~----~~g~~~~l~~f~~~k~v~~ 495 (663)
T TIGR02278 471 RAGGGE----ELGGLRSVKHYMQRTAIQG 495 (663)
T ss_pred cCcCCC----ccchHHHHHHhceeEEEEc
Confidence 999862 4 35799999999999876
No 108
>PRK11904 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed
Probab=100.00 E-value=8.4e-69 Score=640.19 Aligned_cols=428 Identities=19% Similarity=0.179 Sum_probs=353.8
Q ss_pred HHHHHHHHHHHHcCC-c-EEEeeCC-CcchHHHHhcCC-cceeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHH
Q 005047 240 TAKVNAAYCAACAGI-P-VVITSGF-AMDSIIKVLEGK-RVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDR 315 (716)
Q Consensus 240 ~~Kl~aa~~a~~~gi-~-v~I~~g~-~~~~l~~~~tg~-~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R 315 (716)
..++++++...+... . -.|++|. ....+.+|.+++ .+|++..++ .+++++|+++|++||+.|+++|.++|
T Consensus 536 ~~~~~~al~~~~~~~~~~~~~i~g~~~~~~v~nP~~~~~~vg~v~~a~------~~~v~~Ai~aA~~A~~~W~~~~~~~R 609 (1038)
T PRK11904 536 LEPLAAAIAAFLEKQWQAGPIINGEGEARPVVSPADRRRVVGEVAFAD------AEQVEQALAAARAAFPAWSRTPVEER 609 (1038)
T ss_pred HHHHHHHHHHHHhcCceecceEcCCCCeEEEECCCCCCeeEEEEeCCC------HHHHHHHHHHHHHHHHHhccCCHHHH
Confidence 345666666555433 1 2344662 112347888887 789999999 89999999999999999999999999
Q ss_pred HHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhchhHHHHHHhhcCHHHHHHHHHHHHHHhccccc-ccccccccccCCCe
Q 005047 316 RKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGL 394 (716)
Q Consensus 316 ~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~ 394 (716)
+++|++++++|++++++|+.++++|.||.. .++ ..|+..+++.+++++...+. .+...+.+ .+.+.
T Consensus 610 a~iL~kaAdll~~~~~eL~~l~~~E~GK~~----~~a--------~~EV~eaid~lr~ya~~a~~~~~~~~~l~-g~~ge 676 (1038)
T PRK11904 610 AAILERAADLLEANRAELIALCVREAGKTL----QDA--------IAEVREAVDFCRYYAAQARRLFGAPEKLP-GPTGE 676 (1038)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHhCCCH----HHH--------HHHHHHHHHHHHHHHHHHHHhhCCCcccC-CCCCc
Confidence 999999999999999999999887765432 222 24677788888888755432 22211111 12345
Q ss_pred EEEEeecceeEEEEEcCC-Cch-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-Cc
Q 005047 395 ILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-RE 470 (716)
Q Consensus 395 ~~~~~~~PlGVv~~I~p~-~P~-~~~~~~~~ALaaGNtvv~Kps~~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~ 470 (716)
..+..++|+|||++|+|| ||. +..+++++||++||+||+|||++||+++..+++++++ + +|+|++|+|+| ++
T Consensus 677 ~n~~~~~P~GVv~~IsPwNfPlai~~~~i~aALaaGNtVIlKPse~tpl~a~~l~~ll~e----AGlP~gvl~lv~G~g~ 752 (1038)
T PRK11904 677 SNELRLHGRGVFVCISPWNFPLAIFLGQVAAALAAGNTVIAKPAEQTPLIAAEAVKLLHE----AGIPKDVLQLLPGDGA 752 (1038)
T ss_pred eeEEEEecceEEEEECCCccHHHHHHHHHHHHHHcCCEEEeeCCCcCHHHHHHHHHHHHH----hCcCcceEEEeeCCch
Confidence 667889999999999998 796 5679999999999999999999999999999999986 7 99999999996 56
Q ss_pred hHHHhhcCCCCccEEEeecCHHHHHHHHHhc------CCCEEEecCCcceEEEcCCCCHHHHHHHHHHhcCCCCC-cccc
Q 005047 471 EIPDLLKLDDVIDLVIPRGSNKLVSQIKEST------KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNA 543 (716)
Q Consensus 471 ~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a------~~~~~lElGGk~p~iV~~dADl~~Aa~~iv~~~f~n~g-~C~a 543 (716)
++++.|..||+|++|+||||+++|+.|++.+ .+|+++|+|||||+||++|||+|+|++.+++|+|.|+| .|+|
T Consensus 753 ~vg~~Lv~~p~v~~V~FTGS~~~g~~I~~~~A~~~g~~~pvi~ElGGkNa~IV~~dAdld~Av~~iv~saF~~aGQ~CsA 832 (1038)
T PRK11904 753 TVGAALTADPRIAGVAFTGSTETARIINRTLAARDGPIVPLIAETGGQNAMIVDSTALPEQVVDDVVTSAFRSAGQRCSA 832 (1038)
T ss_pred HHHHHHhcCCCcCeEEEECCHHHHHHHHHHHhhccCCCceEEEEcCCcCeEEECCCCCHHHHHHHHHHHHHhCCCCcccc
Confidence 6889999999999999999999999998764 26999999999999999999999999999999999987 9999
Q ss_pred ccceEEEeCccCChhhHHHHHHHHHhcCCE---------------------------------E-ecCccc----cccc-
Q 005047 544 MVETLLVHKDLACNGALNELVVELQHEGVG---------------------------------L-FGGPRA----SKLL- 584 (716)
Q Consensus 544 ~~~rv~V~~~i~dd~f~~~l~~~~~~~~~~---------------------------------~-~g~~~~----~~~~- 584 (716)
+ +|+|||++|| |+|+++|+++++++.+. + .|+... .++|
T Consensus 833 ~-~rl~V~~si~-d~fl~~L~~~~~~l~vGdp~d~~t~~GPvI~~~a~~~l~~~I~~a~~ga~vl~gg~~~~~~~~G~fv 910 (1038)
T PRK11904 833 L-RVLFVQEDIA-DRVIEMLKGAMAELKVGDPRLLSTDVGPVIDAEAKANLDAHIERMKREARLLAQLPLPAGTENGHFV 910 (1038)
T ss_pred C-cEEEEeHHHH-HHHHHHHHHHHHhccCCCcccccCCccCCCCHHHHHHHHHHHHHHHcCCEEEeCCCCCCCCCCceEE
Confidence 9 9999999999 79999999999876421 1 122211 1333
Q ss_pred -c-C---CCCccccccccCceEEEEEeC--CHHHHHHHHHhcCCCceeEEEccCHHHHHHHHHccCcceEEEcCCcCCC-
Q 005047 585 -Q-I---PETRLFHHEYNSMVCTVEIVD--DVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFC- 656 (716)
Q Consensus 585 -p-v---~~~~~~~eE~FGPVl~v~~~~--~~deAi~~aN~~~~GL~a~i~t~d~~~a~~~~~~~~~G~v~vN~~~~~~- 656 (716)
| | +++.+++||+||||++|++|+ |+||||+++|+++|||++||||+|.+++.++++++++|+||||+.+...
T Consensus 911 ~PTvi~~~~~~~~~eEiFGPVL~V~~~~~~~ldeaI~~iN~t~yGLt~~IfS~d~~~~~~~~~~l~aG~vyIN~~~~ga~ 990 (1038)
T PRK11904 911 APTAFEIDSISQLEREVFGPILHVIRYKASDLDKVIDAINATGYGLTLGIHSRIEETADRIADRVRVGNVYVNRNQIGAV 990 (1038)
T ss_pred eeEEEccCCcHHhCCCCcCcEEEEEEeCCCCHHHHHHHHhCCCCCCEEEEEcCCHHHHHHHHHhCCEEEEEEeCCCccCC
Confidence 6 3 457889999999999999997 7999999999999999999999999999999999999999999875432
Q ss_pred -CCCcccCcceeeccccccccccccchhcccEEEEEEEcC
Q 005047 657 -DGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGN 695 (716)
Q Consensus 657 -~~~p~g~g~~sG~~~~~~~~~g~~gl~~ft~~k~v~~~~ 695 (716)
...||||.+.||+|. +.+|++++++|++.|+|+++.
T Consensus 991 vg~qPFGG~~~SG~G~---kaGG~~~L~~f~~~ktv~~~~ 1027 (1038)
T PRK11904 991 VGVQPFGGQGLSGTGP---KAGGPHYLLRFATEKTVTVNT 1027 (1038)
T ss_pred CCCCCCCCCCCCCCCC---ccchHHHHHHHhceEEEEEcc
Confidence 446999999998752 356899999999999998853
No 109
>cd07081 ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldehyde dehydrogenase (ACDH), Ethanolamine utilization protein EutE, and related proteins. Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA. The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH, and may be critical enzymes in the fermentative pathway.
Probab=100.00 E-value=1.4e-68 Score=591.04 Aligned_cols=381 Identities=16% Similarity=0.183 Sum_probs=298.3
Q ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhchhHHHHHHhhcCHHHHHHHHH--H
Q 005047 293 AREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAK--S 370 (716)
Q Consensus 293 v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~ 370 (716)
+++|+++|++||+.|+++|+.+|.++|++++++|++|+++|++++++|.|++. .++.. ++...+. .
T Consensus 1 ~~~Ai~~A~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~----~ea~~--------~~~~~~~~~~ 68 (439)
T cd07081 1 LDDAVAAAKVAQQGLSCKSQEMVDLIFRAAAEAAEDARIDLAKLAVSETGMGR----VEDKV--------IKNHFAAEYI 68 (439)
T ss_pred CHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCh----HHHHH--------HHHHHHHHHH
Confidence 46899999999999999999999999999999999999999999988776543 12211 1222222 1
Q ss_pred HHHHhcccccccccccccccCCCeEEEEeecceeEEEEEcCC-Cch-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHH
Q 005047 371 IRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHK 448 (716)
Q Consensus 371 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~-~P~-~~~~~~~~ALaaGNtvv~Kps~~tp~t~~~l~~ 448 (716)
.++++.. ..+...+. ..+...+++|+|+|||++|+|| ||. +++++++|||++||+||+|||++||+++.++++
T Consensus 69 ~~~~~~~--~~~~~~~~---~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~ 143 (439)
T cd07081 69 YNVYKDE--KTCGVLTG---DENGGTLIIAEPIGVVASITPSTNPTSTVIFKSLISLKTRNSIIFSPHPRAKKVTQRAAT 143 (439)
T ss_pred HHHHhcc--ccCceecC---CCCCceEEEEecceEEEEECCCcchHHHHHHHHHHHHhcCCeEEEECCccchHHHHHHHH
Confidence 2333221 12222221 1123457899999999999998 795 578999999999999999999999999999999
Q ss_pred HHHHhcccc-cCcCceEEecC-CchHHHhhcCCCCccEEEeecCHHHHHHHHHhcCCCEEEecCCcceEEEcCCCCHHHH
Q 005047 449 VITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVA 526 (716)
Q Consensus 449 l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a~~~~~lElGGk~p~iV~~dADl~~A 526 (716)
++.+++.++ +|+|+||+|++ +.++++.|..||+|++|+||||+++.+..++ ..||+++|||||||+||++|||+|+|
T Consensus 144 l~~~~l~~aG~P~gvv~~v~g~~~~~g~~L~~~~~V~~V~FTGs~~v~~~aa~-~~k~~~lElGGk~p~IV~~dADl~~A 222 (439)
T cd07081 144 LLLQAAVAAGAPENLIGWIDNPSIELAQRLMKFPGIGLLLATGGPAVVKAAYS-SGKPAIGVGAGNTPVVIDETADIKRA 222 (439)
T ss_pred HHHHHHHHcCCChhhEEEEcCCCHHHHHHHHcCCCCCEEEEECCHHHHHHHHh-cCCCEEEEcCCCCeEEEcCCCCHHHH
Confidence 999988889 99999999996 5668888889999999999999997665433 36899999999999999999999999
Q ss_pred HHHHHHhcCCCCC-ccccccceEEEeCccCChhhHHHHHHHHHh-------------------cCCEEecCcc-----cc
Q 005047 527 KNIVIDAKIDYPA-ACNAMVETLLVHKDLACNGALNELVVELQH-------------------EGVGLFGGPR-----AS 581 (716)
Q Consensus 527 a~~iv~~~f~n~g-~C~a~~~rv~V~~~i~dd~f~~~l~~~~~~-------------------~~~~~~g~~~-----~~ 581 (716)
++.+++|+|.|+| +|+|. +|+|||++|| |+|+++|++++.- .|..+.|+.. ..
T Consensus 223 a~~iv~~~~~~~GQ~C~a~-~rv~V~~~i~-d~f~~~l~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~gg~~~~~~~~~ 300 (439)
T cd07081 223 VQSIVKSKTFDNGVICASE-QSVIVVDSVY-DEVMRLFEGQGAYKLTAEELQQVQPVILKNGDVNRDIVGQDAYKIAAAA 300 (439)
T ss_pred HHHHHHHHhcCCCCCCCCC-CEEEEcHHHH-HHHHHHHHHcCCccCCHHHHHHHHHHHHhcCCcCCcccCCCHHHHHHHc
Confidence 9999999999987 99999 9999999999 7999999886411 1333443321 01
Q ss_pred cc-c-c----C-------CCCccccccccCceEEEEEeCCHHHHHHHHHhc----CCCceeEEEccC---HHHHHHHHHc
Q 005047 582 KL-L-Q----I-------PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQH----GSAHTDCIVAED---QKVAETFLCQ 641 (716)
Q Consensus 582 ~~-~-p----v-------~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~----~~GL~a~i~t~d---~~~a~~~~~~ 641 (716)
++ + | + ++|++++||+||||++|++|+|+||||+++|++ +|||+++|||+| .+++++++++
T Consensus 301 G~~~~pt~~~i~~~~~~~~~~~i~~eE~FGPVl~v~~~~~~dEAi~~aN~~~n~~~~GLsa~V~T~d~~~~~~a~~~a~~ 380 (439)
T cd07081 301 GLKVPQETRILIGEVTSLAEHEPFAHEKLSPVLAMYRAANFADADAKALALKLEGGCGHTSAMYSDNIKAIENMNQFANA 380 (439)
T ss_pred CCccCCCceEEEEecCCCCCCchhhhCccCceEEEEEcCCHHHHHHHHHHHhhccCCCceEEEECCCcchHHHHHHHHhh
Confidence 22 2 2 1 468999999999999999999999999999976 799999999999 9999999999
Q ss_pred cCcceEEEcCCcCCC---CCCcccCcceeecccccccccc---ccchhcccEEEEEEE
Q 005047 642 VDSAAVFHNASTRFC---DGARFGLGAEVGISTSRIHARG---PVGVEGLLTTRWILR 693 (716)
Q Consensus 642 ~~~G~v~vN~~~~~~---~~~p~g~g~~sG~~~~~~~~~g---~~gl~~ft~~k~v~~ 693 (716)
+++|+|+||.++... ....||++..+-++.+.....+ ..+.++|+++|.+.+
T Consensus 381 l~~G~V~iN~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (439)
T cd07081 381 MKTSRFVKNGPCSQGGLGDLYNFRGWPSMTLGCGTWGGNSVSENVGPKHLVNLKTVAL 438 (439)
T ss_pred CCceEEEEeCCccccccccccCCCCCeeEeeecCCCCCCCcCCCCChHhhheeeeeec
Confidence 999999999876321 1122433433323221111112 246789999988765
No 110
>PRK11903 aldehyde dehydrogenase; Provisional
Probab=100.00 E-value=1.4e-68 Score=603.56 Aligned_cols=395 Identities=16% Similarity=0.170 Sum_probs=323.8
Q ss_pred HHHhcCCcceeEEecCCccccchhhHHHHHHHHHHHH-HHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Q 005047 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESS-RRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 346 (716)
Q Consensus 268 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~-~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~ 346 (716)
.+|.||+.++++.. + .+|+++|+++|++|| +.|+++|..+|+++|++++++|++++++|++++++|.|+..
T Consensus 24 ~nP~tge~l~~v~~-~------~~dv~~Av~aA~~A~~~~W~~~~~~eR~~~L~~~a~~l~~~~~ela~~~~~e~Gkp~- 95 (521)
T PRK11903 24 FDPVTGEELVRVSA-T------GLDLAAAFAFAREQGGAALRALTYAQRAALLAAIVKVLQANRDAYYDIATANSGTTR- 95 (521)
T ss_pred ECCCCCCEEEEecC-C------hHHHHHHHHHHHHhhhhhhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCH-
Confidence 56789999999874 6 779999999999995 99999999999999999999999999999998876654432
Q ss_pred hchhHHHHHHhhcCHHHHHHHHHHHHHHhcccccc-cccccccc--cC----CCeEEEEeecc-eeEEEEEcCC-Cch-h
Q 005047 347 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEPI-GQILKRTE--LA----DGLILEKTSCP-LGVLLIVFES-RPD-A 416 (716)
Q Consensus 347 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~--~~----~~~~~~~~~~P-lGVv~~I~p~-~P~-~ 416 (716)
.++ ..|+..+++.+++++.+.+.. +....... .+ .....+..|+| +|||++|+|| ||. +
T Consensus 96 ---~~a--------~~ev~~~i~~l~~~a~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~pwN~P~~~ 164 (521)
T PRK11903 96 ---NDS--------AVDIDGGIFTLGYYAKLGAALGDARLLRDGEAVQLGKDPAFQGQHVLVPTRGVALFINAFNFPAWG 164 (521)
T ss_pred ---HHH--------HHHHHHHHHHHHHHHHHHHHcCCCcccCCCccccccccccccceEEEecCcceEEEECCcchHHHH
Confidence 122 347778888888877644322 21110000 00 11224567899 6999999998 695 5
Q ss_pred HHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CchHHHhhcCCCCccEEEeecCHHHH
Q 005047 417 LVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLV 494 (716)
Q Consensus 417 ~~~~~~~ALaaGNtvv~Kps~~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g 494 (716)
+.++++|||++||+||+|||+.||+++.+|++++.++ . ||+|++|+|+| ++++++.| +++|+|+||||+++|
T Consensus 165 ~~~~~~~ALaaGN~VV~KPs~~tp~~~~~l~~~~~~a---g~lP~gv~~~v~g~~~~~~~~l---~~v~~v~fTGS~~~G 238 (521)
T PRK11903 165 LWEKAAPALLAGVPVIVKPATATAWLTQRMVKDVVAA---GILPAGALSVVCGSSAGLLDHL---QPFDVVSFTGSAETA 238 (521)
T ss_pred HHHHHHHHHHcCCeEEEEcCCcChHHHHHHHHHHHHh---CCCCcCceEEeeCCchHHHhcc---cCCCEEEEECCHHHH
Confidence 6789999999999999999999999999999999872 4 89999999996 45555544 689999999999999
Q ss_pred HHHHHhc-----CCCEEEecCCcceEEEcCCCC-----HHHHHHHHHHhcCCCCC-ccccccceEEEeCccCChhhHHHH
Q 005047 495 SQIKEST-----KIPVLGHADGICHVYVDKSAN-----LDVAKNIVIDAKIDYPA-ACNAMVETLLVHKDLACNGALNEL 563 (716)
Q Consensus 495 ~~i~~~a-----~~~~~lElGGk~p~iV~~dAD-----l~~Aa~~iv~~~f~n~g-~C~a~~~rv~V~~~i~dd~f~~~l 563 (716)
+.|++.+ .+|++||||||||+||++||| ++.|++.+++|+|.|+| +|+++ +|+|||+++| |+|+++|
T Consensus 239 ~~v~~~aa~~~~~~~~~lElGGknp~IV~~dAd~~~~~~~~aa~~i~~~~f~~sGQ~C~a~-~rv~V~~~i~-d~f~~~L 316 (521)
T PRK11903 239 AVLRSHPAVVQRSVRVNVEADSLNSALLGPDAAPGSEAFDLFVKEVVREMTVKSGQKCTAI-RRIFVPEALY-DAVAEAL 316 (521)
T ss_pred HHHHhhhhhhccCceeEeeccccCceEEccCCcccchhHHHHHHHHHHHHHhccCCCccCC-eEEEEehhHH-HHHHHHH
Confidence 9999853 389999999999999999999 59999999999999987 99999 9999999999 7999999
Q ss_pred HHHHHhcCC---------------------------------EE-ecCccc--------cc-cc-c-C-----C--CCcc
Q 005047 564 VVELQHEGV---------------------------------GL-FGGPRA--------SK-LL-Q-I-----P--ETRL 591 (716)
Q Consensus 564 ~~~~~~~~~---------------------------------~~-~g~~~~--------~~-~~-p-v-----~--~~~~ 591 (716)
+++++++.+ ++ .|+... .+ |+ | | + ++.+
T Consensus 317 ~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~~~~ga~vl~gg~~~~~~~~~~~~g~~~~PTvl~~~~~~~~~~i 396 (521)
T PRK11903 317 AARLAKTTVGNPRNDGVRMGPLVSRAQLAAVRAGLAALRAQAEVLFDGGGFALVDADPAVAACVGPTLLGASDPDAATAV 396 (521)
T ss_pred HHHHHhccCCCCCCCcCccCCCCCHHHHHHHHHHHHHHhcCCEEEECCccCCCCCCCCCCCeEEcCEEEeccCCCccchH
Confidence 999987632 12 244221 13 33 5 2 2 2578
Q ss_pred ccccccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEccCHHHHHHHHHcc--CcceEEEcCCcC---------CCCCCc
Q 005047 592 FHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQV--DSAAVFHNASTR---------FCDGAR 660 (716)
Q Consensus 592 ~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~i~t~d~~~a~~~~~~~--~~G~v~vN~~~~---------~~~~~p 660 (716)
++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.++++++ ++|+|+||+++. ..+.+|
T Consensus 397 ~~eE~FGPvl~V~~~~~~~eai~~~N~~~~gL~asvft~d~~~~~~~~~~l~~~~G~V~iN~~~~~~~~~~~~~~~~~~P 476 (521)
T PRK11903 397 HDVEVFGPVATLLPYRDAAHALALARRGQGSLVASVYSDDAAFLAAAALELADSHGRVHVISPDVAALHTGHGNVMPQSL 476 (521)
T ss_pred HhCcccCCeEEEEeeCCHHHHHHHHhcCCCCceEEEEeCCHHHHHHHHHHHHHhCCEEEEcCcccccccccCCCCCCCCC
Confidence 899999999999999999999999999999999999999999999999999 999999997532 234689
Q ss_pred ccCcceeecccccccc-ccccchhcccEEEEEEE
Q 005047 661 FGLGAEVGISTSRIHA-RGPVGVEGLLTTRWILR 693 (716)
Q Consensus 661 ~g~g~~sG~~~~~~~~-~g~~gl~~ft~~k~v~~ 693 (716)
|||.|.||+|+ + +|++++++||+.|+|..
T Consensus 477 fGG~k~SG~Gr----~~g~~~~l~~~t~~~~~~~ 506 (521)
T PRK11903 477 HGGPGRAGGGE----ELGGLRALAFYHRRSAVQA 506 (521)
T ss_pred CCCCCcCcCCc----ccccHHHHHHHhccceeeC
Confidence 99999999862 3 35789999999877654
No 111
>cd07134 ALDH_AlkH-like Pseudomonas putida Aldehyde dehydrogenase AlkH-like. Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD.
Probab=100.00 E-value=5.9e-68 Score=589.58 Aligned_cols=378 Identities=19% Similarity=0.216 Sum_probs=309.7
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhchhHHHHHHhhcCHHHHHHHHHHHHHH
Q 005047 295 EMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRIL 374 (716)
Q Consensus 295 ~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (716)
+++++|++||+.|+++|..+|.++|++++++|++|++||++++++|+++... ++...++......+++++..++.+
T Consensus 2 ~~~~~a~~a~~~W~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~----ea~~~ev~~~~~~~~~~~~~~~~~ 77 (433)
T cd07134 2 RVFAAQQAHALALRASTAAERIAKLKRLKKAILARREEIIAALAADFRKPAA----EVDLTEILPVLSEINHAIKHLKKW 77 (433)
T ss_pred hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHH----HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4788999999999999999999999999999999999999999888765432 222122222233333333333222
Q ss_pred hcccccccccccccccCCCeEEEEeecceeEEEEEcCC-Cch-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHH
Q 005047 375 ADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITS 452 (716)
Q Consensus 375 ~~~~~~~g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~-~P~-~~~~~~~~ALaaGNtvv~Kps~~tp~t~~~l~~l~~~ 452 (716)
.. ....+......+...++.|+|+|||++|+|| ||. ..+++++|||++||+||+|||+.+|+++.++++++++
T Consensus 78 ~~-----~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~~~~~~~ 152 (433)
T cd07134 78 MK-----PKRVRTPLLLFGTKSKIRYEPKGVCLIISPWNYPFNLAFGPLVSAIAAGNTAILKPSELTPHTSAVIAKIIRE 152 (433)
T ss_pred hC-----CcccCCccccCCCceEEEEecCCEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHH
Confidence 11 0111111001234567899999999999998 696 5679999999999999999999999999999999986
Q ss_pred hcccccCcCceEEecCCchHHHhhcCCCCccEEEeecCHHHHHHHHHhcC---CCEEEecCCcceEEEcCCCCHHHHHHH
Q 005047 453 AIPDTVGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK---IPVLGHADGICHVYVDKSANLDVAKNI 529 (716)
Q Consensus 453 al~~alP~gvv~vv~~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a~---~~~~lElGGk~p~iV~~dADl~~Aa~~ 529 (716)
++|+|++|+++|+.+.+..|..|| +++|+||||+.+|+.|++.+. +|+++|||||||+||++|||++.|++.
T Consensus 153 ----a~p~g~v~~v~g~~~~~~~l~~~~-v~~v~ftGs~~~g~~i~~~aa~~~~~~~lelgG~~~~iV~~dAD~~~aa~~ 227 (433)
T cd07134 153 ----AFDEDEVAVFEGDAEVAQALLELP-FDHIFFTGSPAVGKIVMAAAAKHLASVTLELGGKSPTIVDETADLKKAAKK 227 (433)
T ss_pred ----hCCcCEEEEEeCChhHHHHHHhCC-CCEEEEECChHHHHHHHHHHHhcCCcEEEEccCCCcEEECCCCCHHHHHHH
Confidence 599999999997556777777787 999999999999999998773 899999999999999999999999999
Q ss_pred HHHhcCCCCC-ccccccceEEEeCccCChhhHHHHHHHHHhcCC-----------------------------------E
Q 005047 530 VIDAKIDYPA-ACNAMVETLLVHKDLACNGALNELVVELQHEGV-----------------------------------G 573 (716)
Q Consensus 530 iv~~~f~n~g-~C~a~~~rv~V~~~i~dd~f~~~l~~~~~~~~~-----------------------------------~ 573 (716)
+++++|.|+| .|+++ +|+|||+++| |+|+++|+++++++.. +
T Consensus 228 i~~~~~~~~GQ~C~a~-~rv~V~~~v~-d~f~~~L~~~~~~~~~~~~~~~~~~~~gpli~~~~~~~i~~~i~~a~~~ga~ 305 (433)
T cd07134 228 IAWGKFLNAGQTCIAP-DYVFVHESVK-DAFVEHLKAEIEKFYGKDAARKASPDLARIVNDRHFDRLKGLLDDAVAKGAK 305 (433)
T ss_pred HHHHhhcCcCCcccCC-cEEEECHHHH-HHHHHHHHHHHHHHcCCCCCcCCCCccCCcCCHHHHHHHHHHHHHHHhCCCE
Confidence 9999999987 99999 9999999999 7999999998886411 0
Q ss_pred E-ecCccc-cc-cc-c-C-----CCCccccccccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEccCHHHHHHHHHccC
Q 005047 574 L-FGGPRA-SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVD 643 (716)
Q Consensus 574 ~-~g~~~~-~~-~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~i~t~d~~~a~~~~~~~~ 643 (716)
+ .|+... .+ |+ | | +++++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++++++++
T Consensus 306 ~~~gg~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~ 385 (433)
T cd07134 306 VEFGGQFDAAQRYIAPTVLTNVTPDMKIMQEEIFGPVLPIITYEDLDEVIEYINAKPKPLALYVFSKDKANVNKVLARTS 385 (433)
T ss_pred EEeCCCcCCCCCEEeeEEEeCCCCccHHHhccccCceEEEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCC
Confidence 1 122111 12 23 5 2 368899999999999999999999999999999999999999999999999999999
Q ss_pred cceEEEcCCcCC--CCCCcccCcceeeccccccccccccchhcccEEEEEE
Q 005047 644 SAAVFHNASTRF--CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 692 (716)
Q Consensus 644 ~G~v~vN~~~~~--~~~~p~g~g~~sG~~~~~~~~~g~~gl~~ft~~k~v~ 692 (716)
+|.|+||+++.. .+..||||.+.||+| +++|++|+++||+.|+|.
T Consensus 386 ~g~v~iN~~~~~~~~~~~PfGG~k~SG~G----~~~g~~~l~~~~~~k~i~ 432 (433)
T cd07134 386 SGGVVVNDVVLHFLNPNLPFGGVNNSGIG----SYHGVYGFKAFSHERAVL 432 (433)
T ss_pred cceEEECCcccccCCCCCCCCCcCcccCC----CcCcHHHHHHhcccceee
Confidence 999999987543 357899999999986 356999999999999875
No 112
>cd07087 ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins. ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate.
Probab=100.00 E-value=6e-68 Score=589.16 Aligned_cols=378 Identities=23% Similarity=0.262 Sum_probs=309.6
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhchhHHHHHHhhcCHHHHHHHHHHHHHH
Q 005047 295 EMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRIL 374 (716)
Q Consensus 295 ~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (716)
+++++|++||+.|+++|..+|.++|++++++|++++++|++++++|+++.. .++...++..+...++++++.++.+
T Consensus 2 ~~v~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~----~~~~~~Ev~~~~~~~~~~~~~~~~~ 77 (426)
T cd07087 2 ELVARLRETFLTGKTRSLEWRKAQLKALKRMLTENEEEIAAALYADLGKPP----AEAYLTEIAVVLGEIDHALKHLKKW 77 (426)
T ss_pred hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCH----HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 488999999999999999999999999999999999999999987765542 1222122322333344343333322
Q ss_pred hcccccccccccccccCCCeEEEEeecceeEEEEEcCC-Cch-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHH
Q 005047 375 ADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITS 452 (716)
Q Consensus 375 ~~~~~~~g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~-~P~-~~~~~~~~ALaaGNtvv~Kps~~tp~t~~~l~~l~~~ 452 (716)
... ..........+...+.+++|+|||++|+|| +|. +.++++++||++||+||+|||+.+|+++.++++++.+
T Consensus 78 ~~~-----~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlKps~~~p~~~~~l~~~~~~ 152 (426)
T cd07087 78 MKP-----RRVSVPLLLQPAKAYVIPEPLGVVLIIGPWNYPLQLALAPLIGAIAAGNTVVLKPSELAPATSALLAKLIPK 152 (426)
T ss_pred hCC-----cccCCccccCCCceEEEEecCcEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHH
Confidence 110 101000001123467889999999999998 686 6789999999999999999999999999999999985
Q ss_pred hcccccCcCceEEecCCchHHHhhcCCCCccEEEeecCHHHHHHHHHhc---CCCEEEecCCcceEEEcCCCCHHHHHHH
Q 005047 453 AIPDTVGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST---KIPVLGHADGICHVYVDKSANLDVAKNI 529 (716)
Q Consensus 453 al~~alP~gvv~vv~~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a---~~~~~lElGGk~p~iV~~dADl~~Aa~~ 529 (716)
.+|+|++|+|+|+.+.+..|..|| +|+|+||||+++|+.|++.+ .+|+++|+|||||+||++|||+|.|++.
T Consensus 153 ----~~P~gv~~vv~g~~~~~~~l~~~~-v~~V~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~~~iV~~dadl~~aa~~ 227 (426)
T cd07087 153 ----YFDPEAVAVVEGGVEVATALLAEP-FDHIFFTGSPAVGKIVMEAAAKHLTPVTLELGGKSPCIVDKDANLEVAARR 227 (426)
T ss_pred ----hCCCCEEEEEeCCchHHHHHHhCC-CCEEEEeCChHHHHHHHHHHHhhCCceEEeccCCCceEecCCCCHHHHHHH
Confidence 599999999996545577777888 99999999999999998877 4899999999999999999999999999
Q ss_pred HHHhcCCCCC-ccccccceEEEeCccCChhhHHHHHHHHHhcCC----------------------------E-EecCcc
Q 005047 530 VIDAKIDYPA-ACNAMVETLLVHKDLACNGALNELVVELQHEGV----------------------------G-LFGGPR 579 (716)
Q Consensus 530 iv~~~f~n~g-~C~a~~~rv~V~~~i~dd~f~~~l~~~~~~~~~----------------------------~-~~g~~~ 579 (716)
+++++|.|+| .|+|+ +|+|||+++| |+|+++|+++++++.. + +.||..
T Consensus 228 i~~~~~~~~GQ~C~a~-~rv~V~~~i~-d~f~~~L~~~~~~l~~~~~~~~~~~gpli~~~~~~~~~~~i~~a~v~~gg~~ 305 (426)
T cd07087 228 IAWGKFLNAGQTCIAP-DYVLVHESIK-DELIEELKKAIKEFYGEDPKESPDYGRIINERHFDRLASLLDDGKVVIGGQV 305 (426)
T ss_pred HHHHHHhccCCccccC-CEEEEcHHHH-HHHHHHHHHHHHHHcCCCCccCCCcCCCCCHHHHHHHHHHHhcceEEeCCcc
Confidence 9999999987 99999 9999999999 7999999999887521 0 112221
Q ss_pred c-cc-cc-c-C-----CCCccccccccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEccCHHHHHHHHHccCcceEEEc
Q 005047 580 A-SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHN 650 (716)
Q Consensus 580 ~-~~-~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~i~t~d~~~a~~~~~~~~~G~v~vN 650 (716)
. .+ ++ | | ++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.++++++++|+|+||
T Consensus 306 ~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~iN 385 (426)
T cd07087 306 DKEERYIAPTILDDVSPDSPLMQEEIFGPILPILTYDDLDEAIEFINSRPKPLALYLFSEDKAVQERVLAETSSGGVCVN 385 (426)
T ss_pred CCCCCEEeeEEEecCCCCCHHHhcccccceEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHhcCCcccEEEC
Confidence 1 12 33 5 2 3588999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcCC--CCCCcccCcceeeccccccccccccchhcccEEEEEE
Q 005047 651 ASTRF--CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 692 (716)
Q Consensus 651 ~~~~~--~~~~p~g~g~~sG~~~~~~~~~g~~gl~~ft~~k~v~ 692 (716)
++... .+..||||.+.||+| +++|++|+++||+.|+++
T Consensus 386 ~~~~~~~~~~~PfGG~k~SG~G----~~~g~~~l~~~~~~k~~~ 425 (426)
T cd07087 386 DVLLHAAIPNLPFGGVGNSGMG----AYHGKAGFDTFSHLKSVL 425 (426)
T ss_pred CcccccCCCCCCCCCCCcccCC----CccCHHHHHHhccceeec
Confidence 87532 367899999999986 356999999999999874
No 113
>PRK10090 aldehyde dehydrogenase A; Provisional
Probab=100.00 E-value=2.4e-68 Score=586.42 Aligned_cols=353 Identities=19% Similarity=0.197 Sum_probs=299.8
Q ss_pred HHHHHHHHHhCHHHHHHHHHHHHHHHHHhchhHHHHHHhhcCHHHHHHHHHHHHHHhcccccc-cccccccccCCCeEEE
Q 005047 319 LLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRILADMEEPI-GQILKRTELADGLILE 397 (716)
Q Consensus 319 L~~~a~~l~~~~~el~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~ 397 (716)
|++++++|++|+++|++++++|+++.. .++ ..|+..+++.+++++.+.+.. +...+. ...+...+
T Consensus 1 L~~~a~~l~~~~~el~~~~~~e~Gk~~----~ea--------~~Ev~~~~~~~~~~a~~~~~~~~~~~~~--~~~~~~~~ 66 (409)
T PRK10090 1 LRKIAAGIRERASEISALIVEEGGKIQ----QLA--------EVEVAFTADYIDYMAEWARRYEGEIIQS--DRPGENIL 66 (409)
T ss_pred CHHHHHHHHHCHHHHHHHHHHhcCCCH----HHH--------HHHHHHHHHHHHHHHHHHHHhcCcccCC--CCCCceeE
Confidence 578999999999999999987765442 222 236677777777777655432 222211 11234567
Q ss_pred EeecceeEEEEEcCC-Cch-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CchHH
Q 005047 398 KTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIP 473 (716)
Q Consensus 398 ~~~~PlGVv~~I~p~-~P~-~~~~~~~~ALaaGNtvv~Kps~~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~ 473 (716)
++++|+|||++|+|| ||. +.++++++||++||+||+|||+.||.|+..+++++.+ + ||+|++|+|+| +.+++
T Consensus 67 ~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~----aglP~gv~~~v~g~~~~~~ 142 (409)
T PRK10090 67 LFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDE----IGLPKGVFNLVLGRGETVG 142 (409)
T ss_pred EEEecccEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHH----cCCCcccEEEEeCCChhHH
Confidence 889999999999998 695 5689999999999999999999999999999999986 7 99999999996 66788
Q ss_pred HhhcCCCCccEEEeecCHHHHHHHHHhc---CCCEEEecCCcceEEEcCCCCHHHHHHHHHHhcCCCCC-ccccccceEE
Q 005047 474 DLLKLDDVIDLVIPRGSNKLVSQIKEST---KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMVETLL 549 (716)
Q Consensus 474 ~~l~~~~~v~~v~fTGs~~~g~~i~~~a---~~~~~lElGGk~p~iV~~dADl~~Aa~~iv~~~f~n~g-~C~a~~~rv~ 549 (716)
+.|..||+||+|+||||+++|+.|++++ .||+++|||||||+||++|||+|.|++.+++|+|.|+| .|+|+ +|+|
T Consensus 143 ~~l~~~~~v~~V~ftGs~~~g~~v~~~aa~~~~~~~lElgGk~p~iV~~dADld~aa~~iv~~~f~~~GQ~C~a~-~rv~ 221 (409)
T PRK10090 143 QELAGNPKVAMVSMTGSVSAGEKIMAAAAKNITKVCLELGGKAPAIVMDDADLDLAVKAIVDSRVINSGQVCNCA-ERVY 221 (409)
T ss_pred HHHhcCCCcCEEEEECCHHHHHHHHHHHHhcCCeEEEECCCCCeEEEcCCCCHHHHHHHHHHHHHHhcCCCCCCC-eEEE
Confidence 8899999999999999999999999877 38999999999999999999999999999999999987 99999 9999
Q ss_pred EeCccCChhhHHHHHHHHHhcCC-----------------------------------EE-ecCccc--cc-cc-c-C--
Q 005047 550 VHKDLACNGALNELVVELQHEGV-----------------------------------GL-FGGPRA--SK-LL-Q-I-- 586 (716)
Q Consensus 550 V~~~i~dd~f~~~l~~~~~~~~~-----------------------------------~~-~g~~~~--~~-~~-p-v-- 586 (716)
||+++| |+|+++|+++++++.. ++ .|+.+. .+ |+ | |
T Consensus 222 V~~~i~-~~f~~~l~~~~~~~~~G~p~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~ 300 (409)
T PRK10090 222 VQKGIY-DQFVNRLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVALGGKAVEGKGYYYPPTLLL 300 (409)
T ss_pred EcHHHH-HHHHHHHHHHHHhcCCCCCCCcccCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEecEEEe
Confidence 999999 7999999999987631 11 122221 12 33 5 2
Q ss_pred ---CCCccccccccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEccCHHHHHHHHHccCcceEEEcCCcCCCCCCcccC
Q 005047 587 ---PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGL 663 (716)
Q Consensus 587 ---~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~i~t~d~~~a~~~~~~~~~G~v~vN~~~~~~~~~p~g~ 663 (716)
++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+||||++.......||||
T Consensus 301 ~v~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG 380 (409)
T PRK10090 301 DVRQEMSIMHEETFGPVLPVVAFDTLEEAIAMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINRENFEAMQGFHAG 380 (409)
T ss_pred CCCCCCHHHhCCCCCceEEEEEECCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCC
Confidence 36899999999999999999999999999999999999999999999999999999999999999876666679999
Q ss_pred cceeeccccccccccccchhcccEEEEEEEcC
Q 005047 664 GAEVGISTSRIHARGPVGVEGLLTTRWILRGN 695 (716)
Q Consensus 664 g~~sG~~~~~~~~~g~~gl~~ft~~k~v~~~~ 695 (716)
.++||+| +++|++|+++||+.|++++.+
T Consensus 381 ~k~SG~G----~~~g~~gl~~f~~~k~v~~~~ 408 (409)
T PRK10090 381 WRKSGIG----GADGKHGLHEYLQTQVVYLQS 408 (409)
T ss_pred cccccCC----ccchHHHHHHhcceEEEEEec
Confidence 9999986 357999999999999997753
No 114
>PRK11563 bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=4.8e-68 Score=617.78 Aligned_cols=394 Identities=18% Similarity=0.204 Sum_probs=321.4
Q ss_pred HHHhcCCcceeEEecCCccccchhhHHHHHHHHHHH-HHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Q 005047 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARES-SRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 346 (716)
Q Consensus 268 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a-~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~ 346 (716)
.+|.+|+.++++..++ +|+++|+++|++| |+.|+++|..+|+++|++++++|++|+++|++ +++|+||..
T Consensus 24 ~nP~tg~~i~~~~~~~-------~dv~~Av~~A~~A~~~~W~~~~~~eR~~~L~~~a~~l~~~~~ela~-l~~e~GK~~- 94 (675)
T PRK11563 24 HDAVTGEPVARVSSEG-------LDFAAALAYAREVGGPALRALTFHERAAMLKALAKYLLERKEELYA-LSAQTGATR- 94 (675)
T ss_pred cCCCCCCEEEEEcCCc-------HHHHHHHHHHHHhhhhhhhcCCHHHHHHHHHHHHHHHHHhHHHHHH-HHHHhCCCH-
Confidence 5688999999987644 3899999999998 79999999999999999999999999999998 465554331
Q ss_pred hchhHHHHHHhhcCHHHHHHHHHHHHHHhccccc---------ccccccccccCCCeEEEEeecce-eEEEEEcCC-Cch
Q 005047 347 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEP---------IGQILKRTELADGLILEKTSCPL-GVLLIVFES-RPD 415 (716)
Q Consensus 347 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~g~~~~~~~~~~~~~~~~~~~Pl-GVv~~I~p~-~P~ 415 (716)
.++ ..|+...++.+++++...+. .|+..+.. .......+..++|+ |||++|+|| ||.
T Consensus 95 ---~~a--------~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~p~~GVv~~I~PwNfP~ 162 (675)
T PRK11563 95 ---RDS--------WIDIEGGIGTLFTYASKGRRELPNDTVLVEGEVEPLS-KGGTFAGRHILTPLEGVAVHINAFNFPV 162 (675)
T ss_pred ---HHH--------HHHHHHHHHHHHHHHHHHhhhccccccccCCcccccc-CCCcccceEEEeecCceEEEECCCchHH
Confidence 122 23566677777777654321 12222210 01112246778997 999999999 695
Q ss_pred -hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecCCchHHHhhcCCCCccEEEeecCHHH
Q 005047 416 -ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKL 493 (716)
Q Consensus 416 -~~~~~~~~ALaaGNtvv~Kps~~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~v~~v~fTGs~~~ 493 (716)
+.+++++|||++||+||+||||.||+++.+|++++.++ . +|+|++|+|+|. .++++..++++++|+||||+++
T Consensus 163 ~~~~~~i~pALaaGN~VV~KPse~tp~~a~~l~~~~~ea---G~~P~gv~~vv~g~--~~~~~~~~~~i~~v~FTGS~~~ 237 (675)
T PRK11563 163 WGMLEKLAPAFLAGVPAIVKPATATAYLTEAVVRLIVES---GLLPEGALQLICGS--AGDLLDHLDGQDVVTFTGSAAT 237 (675)
T ss_pred HHHHHHHHHHHHcCCeEEEECCCCCcHHHHHHHHHHHHc---CCCCCCcEEEeeCC--HHHHhhcCCCCCEEEEECcHHH
Confidence 57899999999999999999999999999999999872 4 899999999963 2334544568999999999999
Q ss_pred HHHHHHhc-----CCCEEEecCCcceEEEcCCCC-----HHHHHHHHHHhcCCCCC-ccccccceEEEeCccCChhhHHH
Q 005047 494 VSQIKEST-----KIPVLGHADGICHVYVDKSAN-----LDVAKNIVIDAKIDYPA-ACNAMVETLLVHKDLACNGALNE 562 (716)
Q Consensus 494 g~~i~~~a-----~~~~~lElGGk~p~iV~~dAD-----l~~Aa~~iv~~~f~n~g-~C~a~~~rv~V~~~i~dd~f~~~ 562 (716)
|++|++.+ .+|++||||||||+||++||| +|+|++.+++|+|.|+| +|+|+ +|+|||++|| |+|+++
T Consensus 238 G~~i~~~~~a~~~~~~~~lELGGknp~IV~~DAd~~~~dld~aa~~i~~~~f~~aGQ~C~a~-~rv~V~~~i~-d~f~~~ 315 (675)
T PRK11563 238 AQKLRAHPNVVANSVPFTAEADSLNAAILGPDATPGTPEFDLFVKEVVREMTVKAGQKCTAI-RRAIVPRALV-DAVIEA 315 (675)
T ss_pred HHHHHhhhhhhhCCceEEEecCCcCceEECCCCCcCchhHHHHHHHHHHHHHHhCCCccccc-eeEEeeHHHH-HHHHHH
Confidence 99999842 389999999999999999995 99999999999999987 99999 9999999999 799999
Q ss_pred HHHHHHhcCC---------------------------------EE-ecCcc---------ccccc--c-C-----C--CC
Q 005047 563 LVVELQHEGV---------------------------------GL-FGGPR---------ASKLL--Q-I-----P--ET 589 (716)
Q Consensus 563 l~~~~~~~~~---------------------------------~~-~g~~~---------~~~~~--p-v-----~--~~ 589 (716)
|+++++++.+ ++ .|+.. ..++| | | + .+
T Consensus 316 l~~~~~~l~vG~p~d~~t~~GPli~~~~~~~i~~~i~~a~~~a~vl~Gg~~~~~~~~~~~~~g~f~~PTvl~~v~~~~~~ 395 (675)
T PRK11563 316 LRARLAKVVVGDPRLEGVRMGALASLEQREDVREKVAALLAAAEIVFGGPDSFEVVGADAEKGAFFPPTLLYCDDPLEAP 395 (675)
T ss_pred HHHHHhcCccCCCCCCCCcccCCcCHHHHHHHHHHHHHHHhCCEEEECCcccccccCCCCCCCeeECCEEEeccCchhhh
Confidence 9999988632 11 24421 12433 6 2 3 25
Q ss_pred ccccccccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEccCHHHHHHHHHccC--cceEEEcCCc--------CC-CCC
Q 005047 590 RLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVD--SAAVFHNAST--------RF-CDG 658 (716)
Q Consensus 590 ~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~i~t~d~~~a~~~~~~~~--~G~v~vN~~~--------~~-~~~ 658 (716)
++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++++++++ +|.||||+.+ .. .+.
T Consensus 396 ~i~~eEiFGPVl~V~~~~~~~eai~~aN~s~~gL~asvft~d~~~a~~~~~~l~~~~G~v~iN~~~~~~~~~~~~~~~~~ 475 (675)
T PRK11563 396 AVHDVEAFGPVSTLMPYDDLDEAIELAARGKGSLVASLVTADPEVARELVLGAAPWHGRLLVLNRESAKESTGHGSPLPQ 475 (675)
T ss_pred hHhhccccCCceEEEecCCHHHHHHHHhcCCCCceEEEEeCCHHHHHHHHHHHHhcCCEEEEcCccccccccCCCCCCcC
Confidence 799999999999999999999999999999999999999999999999999997 9999999742 11 256
Q ss_pred CcccCcceeecccccccc-ccccchhcccEEEEEEE
Q 005047 659 ARFGLGAEVGISTSRIHA-RGPVGVEGLLTTRWILR 693 (716)
Q Consensus 659 ~p~g~g~~sG~~~~~~~~-~g~~gl~~ft~~k~v~~ 693 (716)
+||||.+.||+|+ + +|.+|+++|++.|+|..
T Consensus 476 ~pfGG~k~SG~G~----~~~g~~~~~~f~~~k~~~~ 507 (675)
T PRK11563 476 LVHGGPGRAGGGE----ELGGLRGVKHYMQRTAVQG 507 (675)
T ss_pred CCcCCCCCCCCCc----cccchhHHHHhheeeeeec
Confidence 8999999999863 3 36899999999999865
No 115
>TIGR02518 EutH_ACDH acetaldehyde dehydrogenase (acetylating).
Probab=100.00 E-value=3.3e-67 Score=588.08 Aligned_cols=384 Identities=18% Similarity=0.255 Sum_probs=312.9
Q ss_pred hhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhchhHHHHHHhhcCHHHHHHHHH
Q 005047 290 QVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAK 369 (716)
Q Consensus 290 ~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 369 (716)
.+|+++++++|++||+.|++++.++|.++|++++++|++|+++|++...+|.+++. .. +++. +......
T Consensus 7 ~~~v~~av~~A~~A~~~w~~~s~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~------~~-~~~~----~~~~~~~ 75 (488)
T TIGR02518 7 IQQVRNLIRSAKVAQKKLANMTQEQIDKIVKAIVDAAYENAVKLAKMANEETGFGK------WE-DKVI----KNVFAAT 75 (488)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCCh------HH-HHHH----HHHHHHH
Confidence 67899999999999999999999999999999999999999999997776654332 11 1110 1112233
Q ss_pred HHHHHhcccccccccccccccCCCeEEEEeecceeEEEEEcCC-Cchh-HHHHHHHHHHhCCEEEEeCCcchHHHHHHHH
Q 005047 370 SIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPDA-LVQIASLAIRSGNGLLLKGGKEAMRSNAILH 447 (716)
Q Consensus 370 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~-~P~~-~~~~~~~ALaaGNtvv~Kps~~tp~t~~~l~ 447 (716)
.+.+++...+..|.... +.+...+.+++|+|||++|+|| ||.. ..+++++||++||+||+|||+.||.|+..++
T Consensus 76 ~~~~~~~~~~~~G~~~~----~~~~~~~~~~~PlGVV~~I~P~n~P~~~~~~k~~~AL~aGNaVIlKps~~a~~s~~~~~ 151 (488)
T TIGR02518 76 IVYDSIKDMKTIGILSE----DKEKKVIEIAVPVGVVAGLIPSTNPTSTAIYKTLISIKARNAIVFSPHPNAKKCIIETV 151 (488)
T ss_pred HHHHHHhhCcccceecC----CCCcceEEEEecceEEEEEcccCChHHHHHHHHHHHHHcCCcEEEECCccchHHHHHHH
Confidence 33333322233342211 2344567889999999999998 7964 6789999999999999999999999999999
Q ss_pred HHHHHhcccc-cCcCceEEecC-CchHHHhhcCCCCccEEEeecCHHHHHHHHHhcCCCEEEecCCcceEEEcCCCCHHH
Q 005047 448 KVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDV 525 (716)
Q Consensus 448 ~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a~~~~~lElGGk~p~iV~~dADl~~ 525 (716)
++++++++++ +|+|+||+|++ +.+.++.|..||+||+|+||||+.+++.+ ..+.+|+++|+|||+|+||++|||+|+
T Consensus 152 ~~l~~~l~eaGlP~gvv~~v~g~~~e~~~~L~~~~~vd~V~fTGs~~v~~~a-~~~~~pv~~e~gGn~p~iV~~dADld~ 230 (488)
T TIGR02518 152 KLMRKAAEEAGAPEGAIGCITVPTIEGTNELMKNKDTSLILATGGEAMVKAA-YSSGTPAIGVGPGNGPAYIERTANVKK 230 (488)
T ss_pred HHHHHHHHHcCcCcccEEEEcCCCHHHHHHHHhCCCcCEEEEeCCHHHHHHH-HHcCCCEEEEcCCCCeEEEeCCCCHHH
Confidence 9999998899 99999999995 55677777789999999999999999888 556899999999999999999999999
Q ss_pred HHHHHHHhcCCCCC-ccccccceEEEeCccCChhhHHHHHHH-------HHhcCCE--Ee-c----Ccccc--------c
Q 005047 526 AKNIVIDAKIDYPA-ACNAMVETLLVHKDLACNGALNELVVE-------LQHEGVG--LF-G----GPRAS--------K 582 (716)
Q Consensus 526 Aa~~iv~~~f~n~g-~C~a~~~rv~V~~~i~dd~f~~~l~~~-------~~~~~~~--~~-g----~~~~~--------~ 582 (716)
|++.+++|+|+|+| +|+|. +|+|||++|| |+|+++|+++ .+++.+. +. . ++... .
T Consensus 231 Aa~~iv~sk~~~~Gq~C~a~-~rllV~~~i~-d~f~~~L~~~g~~~~~~~~~~~vg~~~~~~~~~~gp~i~~~~~~~i~~ 308 (488)
T TIGR02518 231 AVRDIIDSKTFDNGTICASE-QSIIVEECNK-DAVVEELKKQGGYFLTAEEAEKLGKFILRPNGTMNPQIVGKSPQVIAN 308 (488)
T ss_pred HHHHHHHHHhcCCCCCCCCC-CEEEEeHHHH-HHHHHHHHHhhhhhcCHHHHHhhcccccCCCCCcCcccccchHHHHHH
Confidence 99999999999876 99999 9999999999 7999999887 5554321 00 0 00000 0
Q ss_pred cc----c------------C-CCCccccccccCceEEEEEeCCHHHHHHHHHh----cCCCceeEEEccCHHHHHHHHHc
Q 005047 583 LL----Q------------I-PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQ----HGSAHTDCIVAEDQKVAETFLCQ 641 (716)
Q Consensus 583 ~~----p------------v-~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~----~~~GL~a~i~t~d~~~a~~~~~~ 641 (716)
++ + + ++++ ++||+||||++|++|+|+||||+++|+ ++|||+++|||+|.+++++|+++
T Consensus 309 ~i~~av~~gakll~gg~~~v~~~~~-~~~E~fgPVl~v~~~~~~dEAI~~an~~i~~~~~Glta~I~T~d~~~a~~f~~~ 387 (488)
T TIGR02518 309 LAGLTVPEDAKVLIGEQNGVGNKNP-YSREKLTTILAFYTEENWHEACELSIELLQNEGAGHTLIIHSENKDIVREFALK 387 (488)
T ss_pred HhccccCCCCEEEEeCCCCCCCCCc-cccCccCceEEEEEeCCHHHHHHHHHHhhhcCCCCCeEEEEeCCHHHHHHHHHh
Confidence 00 1 1 2344 589999999999999999999999998 69999999999999999999999
Q ss_pred cCcceEEEcC---------CcCCCCCCcccCcceeeccccccccccccchhcccEEEEEEEcCce
Q 005047 642 VDSAAVFHNA---------STRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGH 697 (716)
Q Consensus 642 ~~~G~v~vN~---------~~~~~~~~p~g~g~~sG~~~~~~~~~g~~gl~~ft~~k~v~~~~~~ 697 (716)
+++|+|+||. ++.+.+++.||+|.+.|+|++ .+.|+++|+++|+|.++..+
T Consensus 388 i~ag~V~VN~~~~~~~~Ga~t~~~~~~~~G~G~~~g~st~-----~~v~~~~l~~~k~v~~~~~~ 447 (488)
T TIGR02518 388 KPVSRMLVNTGGSLGGIGATTNLVPAFTLGCGAVGGSSTS-----DNITPENLINIRRVAYGVRE 447 (488)
T ss_pred CCeeEEEEcCCCcccccccccCCCccccccccccCCCcCC-----CCCCHHHhheeeEEEecccc
Confidence 9999999995 345567777899999888753 38999999999999988743
No 116
>cd07077 ALDH-like NAD(P)+-dependent aldehyde dehydrogenase-like (ALDH-like) family. The aldehyde dehydrogenase-like (ALDH-like) group of the ALDH superfamily of NAD(P)+-dependent enzymes which, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. This group includes families ALDH18, ALDH19, and ALDH20 and represents such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group.
Probab=100.00 E-value=2.3e-66 Score=571.72 Aligned_cols=381 Identities=21% Similarity=0.236 Sum_probs=320.9
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhchhHHHHHHhhcCHHHHHHHHHHHHHHhccc
Q 005047 299 AARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRILADME 378 (716)
Q Consensus 299 ~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (716)
+|++||+.|+++|.++|.++|++++++|++|+++|++++.+|++++... ..+...+++.....++..+++.+++++...
T Consensus 2 ~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~-~~~~~~~~~~~~~~ev~~~~~~~~~~a~~~ 80 (397)
T cd07077 2 SAKNAQRTLAVNHDEQRDLIINAIANALYDTRQRLASEAVSERGAYIRS-LIANWIAMMGCSESKLYKNIDTERGITASV 80 (397)
T ss_pred hHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-ccHHHHHHhCCcHHHHHHHHHHHHHHHHhc
Confidence 6899999999999999999999999999999999999999999877532 223344555556678999999999987543
Q ss_pred cc-ccccccccccCCCeEEEEeecceeEEEEEcCC-CchhHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhccc
Q 005047 379 EP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPD 456 (716)
Q Consensus 379 ~~-~g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~-~P~~~~~~~~~ALaaGNtvv~Kps~~tp~t~~~l~~l~~~al~~ 456 (716)
.. .+...+ .+...+++++|+|||++|+|| ||...++++++||++||+||+|||+.||+|+.++++++.+++..
T Consensus 81 ~~~~~~~~~-----~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~aL~aGN~vilKps~~~p~~~~~l~~~~~~~~~~ 155 (397)
T cd07077 81 GHIQDVLLP-----DNGETYVRAFPIGVTMHILPSTNPLSGITSALRGIATRNQCIFRPHPSAPFTNRALALLFQAADAA 155 (397)
T ss_pred CcccceEec-----CCCceEEEEecceEEEEEeCCCCchHHHHHHHHHHHcCCcEEEEcCcchhhHHHHHHHHHHHHhhc
Confidence 22 222211 123567899999999999998 58557899999999999999999999999999999999987643
Q ss_pred ccCcCceEEecC-CchHHHhhcCCCCccEEEeecCHHHHHHHHHhcC-CCEEEecCCcceEEEcCCCCHHHHHHHHHHhc
Q 005047 457 TVGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK-IPVLGHADGICHVYVDKSANLDVAKNIVIDAK 534 (716)
Q Consensus 457 alP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a~-~~~~lElGGk~p~iV~~dADl~~Aa~~iv~~~ 534 (716)
.+|++++|+|++ +.+.+..|..||+||+|+||||+++|+.+++.+. +|+++|+|||+|+||++|||++.|++.+++++
T Consensus 156 g~p~~~v~~v~~~~~~~~~~l~~~~~vd~v~ftGs~~~~~~v~~~~~~~~~~~~~gg~~~~iv~~dad~~~a~~~~~~~~ 235 (397)
T cd07077 156 HGPKILVLYVPHPSDELAEELLSHPKIDLIVATGGRDAVDAAVKHSPHIPVIGFGAGNSPVVVDETADEERASGSVHDSK 235 (397)
T ss_pred CCCCceEEEecCCCHHHHHHHHcCCCCCEEEecCCHHHHHHHHHcCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHhh
Confidence 399999999985 5567787888999999999999999999988875 99999999999999999999999999999999
Q ss_pred CCCCCccccccceEEEeCccCChhhHHHHHHHHHhcCCEEecCccccccc-cCCCCccccccccCceEEEEEeCCHH---
Q 005047 535 IDYPAACNAMVETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLL-QIPETRLFHHEYNSMVCTVEIVDDVR--- 610 (716)
Q Consensus 535 f~n~g~C~a~~~rv~V~~~i~dd~f~~~l~~~~~~~~~~~~g~~~~~~~~-pv~~~~~~~eE~FGPVl~v~~~~~~d--- 610 (716)
|.|+|.|+|+ +|+|||+++| |+|+++|+++++..|.++..+.+. .++ |.++|++++||+||||++|++|+|+|
T Consensus 236 ~~~GQ~C~a~-~~v~V~~~i~-d~~~~~l~~~~~~~G~~~~~g~~~-~~~~pt~~~~~~~~E~FgPvl~v~~~~~~~eai 312 (397)
T cd07077 236 FFDQNACASE-QNLYVVDDVL-DPLYEEFKLKLVVEGLKVPQETKP-LSKETTPSFDDEALESMTPLECQFRVLDVISAV 312 (397)
T ss_pred ccCCccCCCC-eEEEEehhhh-HHHHHHHHHHHHhcCcCcCCCcee-eEEeccCCCChhhhhhhCceeEEEEEcchHHHH
Confidence 9994499999 9999999999 799999999998866655422211 122 23578899999999999999999996
Q ss_pred -HHHHHHHhcCCCceeEEEccCHHHHHHHHHccCcceEEEcCCcCCC--CCCcccCcc--eeecccccccccc-ccchhc
Q 005047 611 -AAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFC--DGARFGLGA--EVGISTSRIHARG-PVGVEG 684 (716)
Q Consensus 611 -eAi~~aN~~~~GL~a~i~t~d~~~a~~~~~~~~~G~v~vN~~~~~~--~~~p~g~g~--~sG~~~~~~~~~g-~~gl~~ 684 (716)
+|++++|+++|||++||||+|.++++++++++++|+|+||++.... ..+|||+.+ .||++ +++| ++|+++
T Consensus 313 ~~ai~~~n~~~~gl~~~Ift~d~~~~~~~~~~l~~G~v~vN~~~~~~~~~~~~~gg~~~~~SG~g----~~~g~~~~~~~ 388 (397)
T cd07077 313 ENAWMIIESGGGPHTRCVYTHKINKVDDFVQYIDTASFYPNESSKKGRGAFAGKGVERIVTSGMN----NIFGAGVGHDA 388 (397)
T ss_pred HHHHHHHHhcCCCCceEEEeCCHHHHHHHHHhCCEEEEEEeCCccCCCccccCCCcceEEEcccc----CCCCCCCChHH
Confidence 6666789999999999999999999999999999999999987665 334455544 66664 4578 999999
Q ss_pred ccEEEEEE
Q 005047 685 LLTTRWIL 692 (716)
Q Consensus 685 ft~~k~v~ 692 (716)
|++.|+|+
T Consensus 389 ~~~~k~v~ 396 (397)
T cd07077 389 LRPLKRLV 396 (397)
T ss_pred hcceeEee
Confidence 99999985
No 117
>cd07129 ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydrogenase. Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids.
Probab=100.00 E-value=8e-67 Score=583.86 Aligned_cols=380 Identities=17% Similarity=0.172 Sum_probs=311.7
Q ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhchhHHHHHHhhcCHHHHHHHHHHHH
Q 005047 293 AREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIR 372 (716)
Q Consensus 293 v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 372 (716)
|++|+++|++||+.|+++|.++|.++|++++++|++++++|++++.+|++++.. ++ ..|+..+++.++
T Consensus 1 v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gkp~~----~~--------~~ev~~~~~~l~ 68 (454)
T cd07129 1 VDAAAAAAAAAFESYRALSPARRAAFLEAIADEIEALGDELVARAHAETGLPEA----RL--------QGELGRTTGQLR 68 (454)
T ss_pred ChHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChH----HH--------HHHHHHHHHHHH
Confidence 468999999999999999999999999999999999999999998766544321 11 234555666666
Q ss_pred HHhcccc---ccccccccc----ccCCCeEEEEeecceeEEEEEcCC-Cchh---HHHHHHHHHHhCCEEEEeCCcchHH
Q 005047 373 ILADMEE---PIGQILKRT----ELADGLILEKTSCPLGVLLIVFES-RPDA---LVQIASLAIRSGNGLLLKGGKEAMR 441 (716)
Q Consensus 373 ~~~~~~~---~~g~~~~~~----~~~~~~~~~~~~~PlGVv~~I~p~-~P~~---~~~~~~~ALaaGNtvv~Kps~~tp~ 441 (716)
+++...+ ..+...... ....+...+.+++|+|||++|+|| ||.. .++++++||++||+||+|||+.||+
T Consensus 69 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~a~ALaaGN~VVlKps~~~p~ 148 (454)
T cd07129 69 LFADLVREGSWLDARIDPADPDRQPLPRPDLRRMLVPLGPVAVFGASNFPLAFSVAGGDTASALAAGCPVVVKAHPAHPG 148 (454)
T ss_pred HHHHHHHhcCCccccccccccccCCCCCccceEEeeccceEEEECCCCCchhhhhhhhhHHHHHHcCCeEEEEcCCCCch
Confidence 5553321 112211100 001122346789999999999999 6953 3489999999999999999999999
Q ss_pred HHHHHHHHHHHhcccc-cCcCceEEecC-CchHHHhhcCCCCccEEEeecCHHHHHHHHHhc-----CCCEEEecCCcce
Q 005047 442 SNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST-----KIPVLGHADGICH 514 (716)
Q Consensus 442 t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a-----~~~~~lElGGk~p 514 (716)
++.++++++.+++.++ +|+|+||+|+| +.++++.|..||+|++|+||||+.+|+.|++++ .||+++|||||||
T Consensus 149 t~~~l~~~~~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~aa~~~~~~p~~lElGG~n~ 228 (454)
T cd07129 149 TSELVARAIRAALRATGLPAGVFSLLQGGGREVGVALVKHPAIKAVGFTGSRRGGRALFDAAAARPEPIPFYAELGSVNP 228 (454)
T ss_pred HHHHHHHHHHHHHHHhCCChhheEEeeCCcHHHHHHHhcCCCccEEEEeCChHHHHHHHHHhhccCccceeEeecCCcCc
Confidence 9999999999888889 99999999996 546788888899999999999999999998865 3799999999999
Q ss_pred EEEcCCC---CHHHHHHHHHHhcCCCCC-ccccccceEEEeCc-cCChhhHHHHHHHHHhcC------------------
Q 005047 515 VYVDKSA---NLDVAKNIVIDAKIDYPA-ACNAMVETLLVHKD-LACNGALNELVVELQHEG------------------ 571 (716)
Q Consensus 515 ~iV~~dA---Dl~~Aa~~iv~~~f~n~g-~C~a~~~rv~V~~~-i~dd~f~~~l~~~~~~~~------------------ 571 (716)
+||++|| |+|.|++.+++|+|.|+| +|+|+ +|+|||++ +| |+|+++|.++++++.
T Consensus 229 ~iV~~da~~~dl~~aa~~i~~~~~~~~GQ~C~a~-~rv~v~~~~i~-d~f~~~l~~~~~~~~~g~~~~~~~~~~~~~~i~ 306 (454)
T cd07129 229 VFILPGALAERGEAIAQGFVGSLTLGAGQFCTNP-GLVLVPAGPAG-DAFIAALAEALAAAPAQTMLTPGIAEAYRQGVE 306 (454)
T ss_pred EEEeCCcchHHHHHHHHHHHHHHhcCCCCeecCC-ceEEEeCcccH-HHHHHHHHHHHhccCCCCCcChHHHHHHHHHHH
Confidence 9999999 899999999999999987 99999 99999999 99 799999999888753
Q ss_pred -------CEEe-cCccc-cc-cc-c-C----C----CCccccccccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEccC
Q 005047 572 -------VGLF-GGPRA-SK-LL-Q-I----P----ETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAED 631 (716)
Q Consensus 572 -------~~~~-g~~~~-~~-~~-p-v----~----~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~i~t~d 631 (716)
.+++ ||... .+ ++ | | + +|++++||+||||++|++|+|+||||+++|+++|||++||||+|
T Consensus 307 ~a~~~~ga~~l~gg~~~~~g~~~~Ptvl~~~~~~~~~~~i~~~E~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~vft~d 386 (454)
T cd07129 307 ALAAAPGVRVLAGGAAAEGGNQAAPTLFKVDAAAFLADPALQEEVFGPASLVVRYDDAAELLAVAEALEGQLTATIHGEE 386 (454)
T ss_pred HHHhcCCcEEEeCCCcCCCCCccCCEEEEccCCccccchhhcccCCCCeEEEEEeCCHHHHHHHHhcCCCCcEEEEEccC
Confidence 2222 43321 13 33 5 2 2 47899999999999999999999999999999999999999999
Q ss_pred --HHHHHHHHHcc--CcceEEEcCCcCCC---CCCcccC-cceeeccccccccccccchhcccEE
Q 005047 632 --QKVAETFLCQV--DSAAVFHNASTRFC---DGARFGL-GAEVGISTSRIHARGPVGVEGLLTT 688 (716)
Q Consensus 632 --~~~a~~~~~~~--~~G~v~vN~~~~~~---~~~p~g~-g~~sG~~~~~~~~~g~~gl~~ft~~ 688 (716)
.++++++++++ ++|+|+||+++... +.+|||| .+.||+|+ ....|++++++||+.
T Consensus 387 ~~~~~a~~~~~~l~~~~G~v~iN~~~~~~~~~~~~pfgG~~k~sg~g~--~~~~g~~~~~~~~~~ 449 (454)
T cd07129 387 DDLALARELLPVLERKAGRLLFNGWPTGVEVCPAMVHGGPYPATTDPR--FTSVGTAAIERFLRP 449 (454)
T ss_pred chHHHHHHHHHHHHhhCcEEEECCCCccccccCCCCCCCCcCCCCCCc--cccccHHHHHHhccc
Confidence 89999999999 69999999765432 3789999 88898763 212489999999986
No 118
>cd07122 ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydrogenase (ACDH), ALDH family 20-like. Coenzyme A acylating aldehyde dehydrogenase (ACDH, EC=1.2.1.10), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA . The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH and may be critical enzymes in the fermentative pathway.
Probab=100.00 E-value=2.7e-66 Score=571.63 Aligned_cols=376 Identities=20% Similarity=0.257 Sum_probs=299.3
Q ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhchhHHHHHHhhcCHHHHHHHHH-HH
Q 005047 293 AREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAK-SI 371 (716)
Q Consensus 293 v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~ 371 (716)
|++|+++|++||+.|+++|.++|.++|++++++|++|++||++.+++|.|++. .++. ..++...++ .+
T Consensus 1 ~~~av~~A~~A~~~W~~~~~~eR~~~L~~~a~~l~~~~eela~~~~~E~Gk~~----~ea~-------~~e~~~~~~~~~ 69 (436)
T cd07122 1 VDELVERARKAQREFATFSQEQVDKIVEAVAWAAADAAEELAKMAVEETGMGV----VEDK-------VIKNHFASEYVY 69 (436)
T ss_pred ChHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCc----HHHH-------HHHHHHHHHHHH
Confidence 46899999999999999999999999999999999999999999887765442 1221 124455555 56
Q ss_pred HHHhcccccccccccccccCCCeEEEEeecceeEEEEEcCC-Cch-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHH
Q 005047 372 RILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKV 449 (716)
Q Consensus 372 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~-~P~-~~~~~~~~ALaaGNtvv~Kps~~tp~t~~~l~~l 449 (716)
++++.. +..+.... ..+...+++|+|+|||++|+|| ||. ..++++++||++||+||+|||+.||+|+.+++++
T Consensus 70 ~~~~~~-~~~g~~~~----~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~~~~~ 144 (436)
T cd07122 70 NDIKDM-KTVGVIEE----DEEKGIVEIAEPVGVIAALIPSTNPTSTAIFKALIALKTRNAIIFSPHPRAKKCSIEAAKI 144 (436)
T ss_pred HHHhcC-cceeeecc----CCCCCeEEEeecccEEEEEeCCCCchHHHHHHHHHHHHcCCcEEEECCcchhhHHHHHHHH
Confidence 666542 22232111 1234567889999999999998 696 4679999999999999999999999999999999
Q ss_pred HHHhcccc-cCcCceEEecC-CchHHHhhcCCCCccEEEeecCHHHHHHHHHhcCCCEEEecCCcceEEEcCCCCHHHHH
Q 005047 450 ITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAK 527 (716)
Q Consensus 450 ~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a~~~~~lElGGk~p~iV~~dADl~~Aa 527 (716)
++++|.++ +|+|++|+|+| +++++..|..||+||+|+||||+++++..+ ...+|+++|||||||+||++|||+|+|+
T Consensus 145 ~~~~l~eaG~P~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~v~~~a~-~~~~~~~~elgG~~p~iV~~dADl~~A~ 223 (436)
T cd07122 145 MREAAVAAGAPEGLIQWIEEPSIELTQELMKHPDVDLILATGGPGMVKAAY-SSGKPAIGVGPGNVPAYIDETADIKRAV 223 (436)
T ss_pred HHHHHHHcCCCchhEEEecCCChHHHHHHHcCCCcCEEEEcCCHHHHHHHH-hcCCCEEEecCCCCeEEEcCCCCHHHHH
Confidence 99888889 99999999996 566788888899999999999999987653 3479999999999999999999999999
Q ss_pred HHHHHhcCCCCC-ccccccceEEEeCccCChhhHHHHHHHHHhc-------C---------CEE---e-cCcc--c----
Q 005047 528 NIVIDAKIDYPA-ACNAMVETLLVHKDLACNGALNELVVELQHE-------G---------VGL---F-GGPR--A---- 580 (716)
Q Consensus 528 ~~iv~~~f~n~g-~C~a~~~rv~V~~~i~dd~f~~~l~~~~~~~-------~---------~~~---~-g~~~--~---- 580 (716)
+.+++|+|.|+| .|+++ +|+|||++|| |+|+++|+++.+.+ . ..+ . +... .
T Consensus 224 ~~i~~~~f~~~GQ~C~a~-~rv~V~~~i~-d~f~~~l~~~~~~l~~~~~~~~v~~~~~~~~~~~gp~~~~~~~~~~~~~~ 301 (436)
T cd07122 224 KDIILSKTFDNGTICASE-QSVIVDDEIY-DEVRAELKRRGAYFLNEEEKEKLEKALFDDGGTLNPDIVGKSAQKIAELA 301 (436)
T ss_pred HHHHHHhhccCCCCCCCC-CEEEEechhH-HHHHHHHHHhcceecCHHHHHHHHHHhhcCCCCcCccccCcCHHHHHHHc
Confidence 999999999987 99999 9999999999 79999999876543 1 001 0 1100 0
Q ss_pred ccccc------------C-CCCccccccccCceEEEEEeCCHHHHHHHHHhc----CCCceeEEEccCHHHHHHHHHccC
Q 005047 581 SKLLQ------------I-PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQH----GSAHTDCIVAEDQKVAETFLCQVD 643 (716)
Q Consensus 581 ~~~~p------------v-~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~----~~GL~a~i~t~d~~~a~~~~~~~~ 643 (716)
...++ + ++|+++ +|.||||++|++|+|+||||+++|++ +|||++||||+|.+++++++++++
T Consensus 302 ~~~~~~ga~vl~~~~~~v~~~~~~~-~E~FGPVl~v~~~~~~~eAi~~aN~~~~~~~~GLsa~V~T~d~~~a~~~~~~l~ 380 (436)
T cd07122 302 GIEVPEDTKVLVAEETGVGPEEPLS-REKLSPVLAFYRAEDFEEALEKARELLEYGGAGHTAVIHSNDEEVIEEFALRMP 380 (436)
T ss_pred CCCCCCCCeEEEEecCCCCCCCcch-hcccCCeEEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCHHHHHHHHhhCC
Confidence 00111 1 357777 56799999999999999999999998 899999999999999999999999
Q ss_pred cceEEEcCCcCCCC------CCcc----cCcceeeccccccccccccchhcccEEEEEEE
Q 005047 644 SAAVFHNASTRFCD------GARF----GLGAEVGISTSRIHARGPVGVEGLLTTRWILR 693 (716)
Q Consensus 644 ~G~v~vN~~~~~~~------~~p~----g~g~~sG~~~~~~~~~g~~gl~~ft~~k~v~~ 693 (716)
+|+||||.++.+.. +.|+ |+|.+.|.+ ..+.-+.++|+++|+|.+
T Consensus 381 aG~V~IN~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 435 (436)
T cd07122 381 VSRILVNTPSSLGGIGDTYNGLAPSLTLGCGSWGGNS-----TSDNVGPKHLLNIKRVAY 435 (436)
T ss_pred ceEEEEeCCccccccCccCCCCCceeeeeccccCCCc-----CCCCCChHHhheeEeecc
Confidence 99999998875311 1221 222221111 123467889999999865
No 119
>PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed
Probab=100.00 E-value=8.5e-67 Score=627.27 Aligned_cols=385 Identities=18% Similarity=0.192 Sum_probs=331.5
Q ss_pred hHHHHhc-CCcceeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Q 005047 266 SIIKVLE-GKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAA 344 (716)
Q Consensus 266 ~l~~~~t-g~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~ 344 (716)
.+.+|.+ ++.+|++..++ .++|++|+++|++||+.|+++|..+|+++|++++++|++|+++|+.++.+|.||.
T Consensus 662 ~v~nPa~~~~~vg~v~~a~------~~dv~~Av~aA~~A~~~W~~~p~~eRa~iL~r~Adlle~~~~eL~~l~~~EaGKt 735 (1318)
T PRK11809 662 PVINPADPRDIVGYVREAT------PAEVEQALESAVNAAPIWFATPPAERAAILERAADLMEAQMQTLMGLLVREAGKT 735 (1318)
T ss_pred EeECCCCCCeeEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHhCCC
Confidence 3567887 67789998888 8999999999999999999999999999999999999999999999988776543
Q ss_pred HHhchhHHHHHHhhcCHHHHHHHHHHHHHHhcccccccccccccccCCCeEEEEeecceeEEEEEcCC-Cch-hHHHHHH
Q 005047 345 QEAGYAKSLVSRLALKPGKISSLAKSIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIAS 422 (716)
Q Consensus 345 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~-~P~-~~~~~~~ 422 (716)
. .++ ..|+..+++.+++|+...+. .. ....++|+|||++|+|| ||+ +..++++
T Consensus 736 ~----~~A--------~~EV~eaidflryyA~~a~~---~~----------~~~~~~PlGVV~~IsPWNFPlai~~g~ia 790 (1318)
T PRK11809 736 F----SNA--------IAEVREAVDFLRYYAGQVRD---DF----------DNDTHRPLGPVVCISPWNFPLAIFTGQVA 790 (1318)
T ss_pred H----HHH--------HHHHHHHHHHHHHHHHHHHH---hc----------CCceeecccEEEEECCCccHHHHHHHHHH
Confidence 2 222 34788999999999864321 00 02358999999999999 686 5679999
Q ss_pred HHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CchHHHhhcCCCCccEEEeecCHHHHHHHHHh
Q 005047 423 LAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKES 500 (716)
Q Consensus 423 ~ALaaGNtvv~Kps~~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~ 500 (716)
+||++||+||+||||+||+++..+++++++ + +|+|++|+|+| ++++++.|+.||+|++|+||||+++|+.|++.
T Consensus 791 aALaAGN~VV~KPseqTpl~a~~lv~ll~e----AGlP~gvlqlv~G~g~~vg~~Lv~~p~V~~V~FTGSt~tg~~I~~~ 866 (1318)
T PRK11809 791 AALAAGNSVLAKPAEQTPLIAAQAVRILLE----AGVPAGVVQLLPGRGETVGAALVADARVRGVMFTGSTEVARLLQRN 866 (1318)
T ss_pred HHHHcCCeEEEeCCCCcHHHHHHHHHHHHH----hCcCcCeEEEeeCCcHHHHHHHhcCCCcCEEEEeCCHHHHHHHHHH
Confidence 999999999999999999999999999987 7 99999999996 67789999999999999999999999999876
Q ss_pred cC---------CCEEEecCCcceEEEcCCCCHHHHHHHHHHhcCCCCC-ccccccceEEEeCccCChhhHHHHHHHHHhc
Q 005047 501 TK---------IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMVETLLVHKDLACNGALNELVVELQHE 570 (716)
Q Consensus 501 a~---------~~~~lElGGk~p~iV~~dADl~~Aa~~iv~~~f~n~g-~C~a~~~rv~V~~~i~dd~f~~~l~~~~~~~ 570 (716)
++ +|+++|+|||||+||++|||+|+|++.+++|+|.|+| +|+|. +|+|||++|| |+|+++|+++++++
T Consensus 867 aA~~l~~~g~~~pliaElGGkNa~IVdsdAdle~Av~~iv~sAF~~aGQrCsA~-~rl~V~e~Ia-d~fl~~L~~a~~~l 944 (1318)
T PRK11809 867 LAGRLDPQGRPIPLIAETGGQNAMIVDSSALTEQVVADVLASAFDSAGQRCSAL-RVLCLQDDVA-DRTLKMLRGAMAEC 944 (1318)
T ss_pred HhhhcccccCceeEEEecCCccceEECCCCCHHHHHHHHHHHHHhcCCCccccC-cEEEEcHHHH-HHHHHHHHHHHHhc
Confidence 42 6999999999999999999999999999999999977 99999 9999999999 79999999999886
Q ss_pred CC----------------------------------EEe-cCcc-----ccccc--c-C---CCCccccccccCceEEEE
Q 005047 571 GV----------------------------------GLF-GGPR-----ASKLL--Q-I---PETRLFHHEYNSMVCTVE 604 (716)
Q Consensus 571 ~~----------------------------------~~~-g~~~-----~~~~~--p-v---~~~~~~~eE~FGPVl~v~ 604 (716)
.+ .+. ++.. ..++| | | +++.+++||+|||||+|+
T Consensus 945 ~vGdP~~~~tdvGPvId~~a~~~i~~~I~~a~~~G~~v~~g~~~~~~~~~~G~fv~PTIi~~~~~~~l~eEiFGPVL~V~ 1024 (1318)
T PRK11809 945 RMGNPDRLSTDIGPVIDAEAKANIERHIQAMRAKGRPVFQAARENSEDWQSGTFVPPTLIELDSFDELKREVFGPVLHVV 1024 (1318)
T ss_pred CCCCcccccCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCCCCCCCCCCCeEEeeEEEeccchhhhcCcccCceEEEE
Confidence 32 111 1110 11333 5 3 457889999999999999
Q ss_pred EeC--CHHHHHHHHHhcCCCceeEEEccCHHHHHHHHHccCcceEEEcCCcCCC--CCCcccCcceeecccccccccccc
Q 005047 605 IVD--DVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFC--DGARFGLGAEVGISTSRIHARGPV 680 (716)
Q Consensus 605 ~~~--~~deAi~~aN~~~~GL~a~i~t~d~~~a~~~~~~~~~G~v~vN~~~~~~--~~~p~g~g~~sG~~~~~~~~~g~~ 680 (716)
+|+ |+||||+++|+++|||+++|||+|.+++.++++++++|+||||+..... ...||||.+.||.|. +.+|++
T Consensus 1025 ~~~~~~ldeaI~~iN~t~yGLt~gV~Srd~~~~~~v~~~l~aGnvyINr~~~gavvg~qPFGG~g~SG~G~---kaGGp~ 1101 (1318)
T PRK11809 1025 RYNRNQLDELIEQINASGYGLTLGVHTRIDETIAQVTGSAHVGNLYVNRNMVGAVVGVQPFGGEGLSGTGP---KAGGPL 1101 (1318)
T ss_pred EeCCCCHHHHHHHHhcCCCCceEEEEeCCHHHHHHHHHhCCEeEEEECCCCcCCCcCCCCCCCcCcCCCCC---CCCCHH
Confidence 996 7999999999999999999999999999999999999999999865432 346999998888752 457999
Q ss_pred chhcccEEEE
Q 005047 681 GVEGLLTTRW 690 (716)
Q Consensus 681 gl~~ft~~k~ 690 (716)
++..|++.+.
T Consensus 1102 yL~~f~~~~~ 1111 (1318)
T PRK11809 1102 YLYRLLATRP 1111 (1318)
T ss_pred HHHHHhccCC
Confidence 9999999874
No 120
>PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed
Probab=100.00 E-value=3.1e-66 Score=624.57 Aligned_cols=389 Identities=18% Similarity=0.194 Sum_probs=335.3
Q ss_pred HHHHhc-CCcceeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Q 005047 267 IIKVLE-GKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQ 345 (716)
Q Consensus 267 l~~~~t-g~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~ 345 (716)
+.+|.+ ++.+|++..++ .+++++|+++|++||+.|+.+|.++|+++|++++++|++++++|++++.+|.+|..
T Consensus 571 v~nP~~~~~~vg~v~~a~------~~~v~~Av~aA~~A~~~W~~~~~~~Ra~iL~raAdll~~~~~eL~~l~~~E~GKt~ 644 (1208)
T PRK11905 571 VLNPADHDDVVGTVTEAS------AEDVERALAAAQAAFPEWSATPAAERAAILERAADLMEAHMPELFALAVREAGKTL 644 (1208)
T ss_pred EECCCCCCceEEEEeCCC------HHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCH
Confidence 467888 78889999888 89999999999999999999999999999999999999999999999887765432
Q ss_pred HhchhHHHHHHhhcCHHHHHHHHHHHHHHhcccccccccccccccCCCeEEEEeecceeEEEEEcCC-Cch-hHHHHHHH
Q 005047 346 EAGYAKSLVSRLALKPGKISSLAKSIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 423 (716)
Q Consensus 346 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~-~P~-~~~~~~~~ 423 (716)
.++ ..|+..+++.+++|+...+.. . ....++|+|||++|+|| ||+ +..+++++
T Consensus 645 ----~ea--------~~Ev~eaid~lr~ya~~a~~~----~---------~~~~~~P~GVv~~IsPwNfPlai~~g~i~a 699 (1208)
T PRK11905 645 ----ANA--------IAEVREAVDFLRYYAAQARRL----L---------NGPGHKPLGPVVCISPWNFPLAIFTGQIAA 699 (1208)
T ss_pred ----HHH--------HHHHHHHHHHHHHHHHHHHHh----c---------CCceecCccEEEEEcCCcCHHHHHHHHHHH
Confidence 222 347888999999988643211 0 01347899999999999 786 56789999
Q ss_pred HHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CchHHHhhcCCCCccEEEeecCHHHHHHHHHhc
Q 005047 424 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST 501 (716)
Q Consensus 424 ALaaGNtvv~Kps~~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a 501 (716)
||++||+||+|||++||+++..+++++++ + +|+|++|+|+| ++++++.|..||+|++|+||||+++|+.|++.+
T Consensus 700 ALaaGN~VV~KPse~tpl~a~~l~~ll~e----AGlP~gvl~lV~G~g~~vg~~Lv~~p~v~~V~FTGSt~vg~~I~~~~ 775 (1208)
T PRK11905 700 ALVAGNTVLAKPAEQTPLIAARAVRLLHE----AGVPKDALQLLPGDGRTVGAALVADPRIAGVMFTGSTEVARLIQRTL 775 (1208)
T ss_pred HHHcCCEEEEeCCcccHHHHHHHHHHHHH----cCCCcccEEEeeCCchHHHHHHHcCCCcCEEEEeCCHHHHHHHHHHH
Confidence 99999999999999999999999999986 8 99999999996 566899999999999999999999999998865
Q ss_pred ------CCCEEEecCCcceEEEcCCCCHHHHHHHHHHhcCCCCC-ccccccceEEEeCccCChhhHHHHHHHHHhcCCE-
Q 005047 502 ------KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMVETLLVHKDLACNGALNELVVELQHEGVG- 573 (716)
Q Consensus 502 ------~~~~~lElGGk~p~iV~~dADl~~Aa~~iv~~~f~n~g-~C~a~~~rv~V~~~i~dd~f~~~l~~~~~~~~~~- 573 (716)
.+|+++|+|||||+||++|||+|.|++.+++|+|.|+| .|+|. +|+|||++|| |+|+++|+++++++.+.
T Consensus 776 A~~~~~~~pli~ElGGkN~~IV~~dAdle~Av~~iv~saF~~aGQ~CsA~-~rl~V~~si~-d~f~e~L~~~~~~l~vGd 853 (1208)
T PRK11905 776 AKRSGPPVPLIAETGGQNAMIVDSSALPEQVVADVIASAFDSAGQRCSAL-RVLCLQEDVA-DRVLTMLKGAMDELRIGD 853 (1208)
T ss_pred HhhcCCCCeEEEecCCcCeEEEcCCCCHHHHHHHHHHHHHhcCCCccccC-cEEEEehhHH-HHHHHHHHHHHHHhcCCC
Confidence 27999999999999999999999999999999999987 99999 9999999999 79999999999886421
Q ss_pred ---------------------------------EecCcc----ccccc--c-C---CCCccccccccCceEEEEEeC--C
Q 005047 574 ---------------------------------LFGGPR----ASKLL--Q-I---PETRLFHHEYNSMVCTVEIVD--D 608 (716)
Q Consensus 574 ---------------------------------~~g~~~----~~~~~--p-v---~~~~~~~eE~FGPVl~v~~~~--~ 608 (716)
+.++.. ..++| | | +++.+++||+||||++|++|+ |
T Consensus 854 P~d~~t~~GPvId~~a~~~i~~~I~~a~~~G~~l~~g~~~~~~~~G~fv~PTVl~~~~~~~~~eEiFGPVL~V~~y~~~d 933 (1208)
T PRK11905 854 PWRLSTDVGPVIDAEAQANIEAHIEAMRAAGRLVHQLPLPAETEKGTFVAPTLIEIDSISDLEREVFGPVLHVVRFKADE 933 (1208)
T ss_pred chhccCCccCccCHHHHHHHHHHHHHHHHCCCEEEEccCCCCCCCCeEEeeEEEecCChHHhcCCccCceEEEEEeCCCC
Confidence 111110 11333 5 3 467889999999999999997 7
Q ss_pred HHHHHHHHHhcCCCceeEEEccCHHHHHHHHHccCcceEEEcCCcCCC--CCCcccCcceeeccccccccccccchhccc
Q 005047 609 VRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFC--DGARFGLGAEVGISTSRIHARGPVGVEGLL 686 (716)
Q Consensus 609 ~deAi~~aN~~~~GL~a~i~t~d~~~a~~~~~~~~~G~v~vN~~~~~~--~~~p~g~g~~sG~~~~~~~~~g~~gl~~ft 686 (716)
+||||+++|+++|||+++|||+|.+++.++++++++|+||||+..... +..||||.+.||.|. +.+|++++.+|+
T Consensus 934 ldeaI~~iN~t~yGLt~~I~S~d~~~~~~~~~~l~aGnvyIN~~~~ga~vg~qPFGG~~~SG~G~---kaGGp~~L~~f~ 1010 (1208)
T PRK11905 934 LDRVIDDINATGYGLTFGLHSRIDETIAHVTSRIRAGNIYVNRNIIGAVVGVQPFGGEGLSGTGP---KAGGPLYLGRLV 1010 (1208)
T ss_pred HHHHHHHHhcCCCCceEEEEcCCHHHHHHHHHhCCEeEEEECCCCCCCccCCCCCCCCCCCCCCC---cCCCHHHHHHHh
Confidence 999999999999999999999999999999999999999999875543 457999998888752 467999999999
Q ss_pred EEEEEEEcC
Q 005047 687 TTRWILRGN 695 (716)
Q Consensus 687 ~~k~v~~~~ 695 (716)
+.|+++++.
T Consensus 1011 ~~k~v~~~~ 1019 (1208)
T PRK11905 1011 REAPTPIPP 1019 (1208)
T ss_pred hcceeeccc
Confidence 999998653
No 121
>cd07084 ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like. ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway.
Probab=100.00 E-value=1.1e-65 Score=572.29 Aligned_cols=375 Identities=14% Similarity=0.103 Sum_probs=307.9
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhchhHHHHHHhhcCHHHHHHHHHHHHH
Q 005047 294 REMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRI 373 (716)
Q Consensus 294 ~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (716)
++|+++|++||+.|+++|..+|.++|++++++|++|++||+.++++|+|++.+ . ..|+...++.+++
T Consensus 2 ~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~-----~--------~~ev~~~i~~~~~ 68 (442)
T cd07084 2 ERALLAADISTKAARRLALPKRADFLARIIQRLAAKSYDIAAGAVLVTGKGWM-----F--------AENICGDQVQLRA 68 (442)
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHcCCchh-----h--------hhhhcchHHHHHH
Confidence 57899999999999999999999999999999999999999998877654421 1 1245555555555
Q ss_pred Hhcccccc---cccccccccCCCeEEEEeecceeEEEEEcCC-Cch-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHH
Q 005047 374 LADMEEPI---GQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHK 448 (716)
Q Consensus 374 ~~~~~~~~---g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~-~P~-~~~~~~~~ALaaGNtvv~Kps~~tp~t~~~l~~ 448 (716)
++...+.. +..........+...+.+++|+|||++|+|| ||. +.++++++||++||+||+|||+.+|.++..+++
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~vvlKps~~~p~~~~~l~~ 148 (442)
T cd07084 69 RAFVIYSYRIPHEPGNHLGQGLKQQSHGYRWPYGPVLVIGAFNFPLWIPLLQLAGALAMGNPVIVKPHTAVSIVMQIMVR 148 (442)
T ss_pred HHHHHHhccccccccccCCCCccccceEEeecceeEEEEcCCccHhHHHHHHHHHHHHcCCeEEEECCCCchHHHHHHHH
Confidence 54332211 1100000000123467889999999999998 796 567899999999999999999999999999999
Q ss_pred HHHHhcccc-c-CcCceEEecCCchHHHhhcCCCCccEEEeecCHHHHHHHHHhcC-CCEEEecCCcceEEEcCCC-CHH
Q 005047 449 VITSAIPDT-V-GEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK-IPVLGHADGICHVYVDKSA-NLD 524 (716)
Q Consensus 449 l~~~al~~a-l-P~gvv~vv~~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a~-~~~~lElGGk~p~iV~~dA-Dl~ 524 (716)
++++ + + |+|++|+|+|...++..|..||++|+|+||||+++|+.|++.+. +|+++|||||||+||++|| |+|
T Consensus 149 ~l~~----ag~~P~g~~~~v~g~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~a~~~~v~lElgG~~~~iV~~dadd~~ 224 (442)
T cd07084 149 LLHY----AGLLPPEDVTLINGDGKTMQALLLHPNPKMVLFTGSSRVAEKLALDAKQARIYLELAGFNWKVLGPDAQAVD 224 (442)
T ss_pred HHHH----hCCCCccceEEeeCCcHHHHHHHcCCCCCEEEEECCHHHHHHHHHhccCCcEEEeccCcCcEEECCChhhHH
Confidence 9997 6 6 99999999964337888888999999999999999999999887 8999999999999999999 699
Q ss_pred HHHHHHHHhcCCCCC-ccccccceEEEeCc-cCChhhHHHHHHHHHhcCC--------------------------EE-e
Q 005047 525 VAKNIVIDAKIDYPA-ACNAMVETLLVHKD-LACNGALNELVVELQHEGV--------------------------GL-F 575 (716)
Q Consensus 525 ~Aa~~iv~~~f~n~g-~C~a~~~rv~V~~~-i~dd~f~~~l~~~~~~~~~--------------------------~~-~ 575 (716)
.|++.+++++|.|+| .|+|+ +|+|||++ +| |+|+++|+++++++.+ ++ .
T Consensus 225 ~a~~~i~~~~~~~~GQ~C~a~-~rl~V~~~~i~-~~f~~~l~~~~~~~~~g~~~~gpl~~~~~~~~i~~a~~~gga~~~~ 302 (442)
T cd07084 225 YVAWQCVQDMTACSGQKCTAQ-SMLFVPENWSK-TPLVEKLKALLARRKLEDLLLGPVQTFTTLAMIAHMENLLGSVLLF 302 (442)
T ss_pred HHHHHHHHHHhcccCCeecCC-cEEEEeCCccH-HHHHHHHHHHHHhcccCccccChhhhHHHHHHHHHHHhcCCcEEEe
Confidence 999999999999987 99999 99999999 99 7999999998887531 22 2
Q ss_pred cCccc--------cc-cc-c-C-----CCC---ccccccccCceEEEEEeCC--HHHHHHHHHhcCCCceeEEEccCHHH
Q 005047 576 GGPRA--------SK-LL-Q-I-----PET---RLFHHEYNSMVCTVEIVDD--VRAAIDHIHQHGSAHTDCIVAEDQKV 634 (716)
Q Consensus 576 g~~~~--------~~-~~-p-v-----~~~---~~~~eE~FGPVl~v~~~~~--~deAi~~aN~~~~GL~a~i~t~d~~~ 634 (716)
|+... .+ |+ | | ++| ++++||+||||++|++|+| ++|||+++|+++|||++||||+|.++
T Consensus 303 gg~~~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~ 382 (442)
T cd07084 303 SGKELKNHSIPSIYGACVASALFVPIDEILKTYELVTEEIFGPFAIVVEYKKDQLALVLELLERMHGSLTAAIYSNDPIF 382 (442)
T ss_pred CCcccccCCCCCcCCcccCCeEEEecCcccccchHHheeccCceEEEEEeCCccHHHHHHHHHhCCCCeeEEEEeCCHHH
Confidence 33221 13 33 5 2 345 8999999999999999999 99999999999999999999999999
Q ss_pred HHHHHHcc-CcceEEEcCC--cCCCCCCcccC-cceeecccccccc-ccccchhcccEEEEE
Q 005047 635 AETFLCQV-DSAAVFHNAS--TRFCDGARFGL-GAEVGISTSRIHA-RGPVGVEGLLTTRWI 691 (716)
Q Consensus 635 a~~~~~~~-~~G~v~vN~~--~~~~~~~p~g~-g~~sG~~~~~~~~-~g~~gl~~ft~~k~v 691 (716)
++++++++ ++|+||||+. +...+..|||| ++.||+|. + +|.+++++||+...+
T Consensus 383 ~~~~~~~l~~~G~v~iN~~~~~~~~~~~~~gG~~k~sG~g~----~~~g~~~~~~~~~~~~~ 440 (442)
T cd07084 383 LQELIGNLWVAGRTYAILRGRTGVAPNQNHGGGPAADPRGA----GIGGPEAIKLVWRCHAE 440 (442)
T ss_pred HHHHHHHHHhcCeEEECCCCCCCccccccCCCCCCCCCCCc----cccchHHhhheeeeeee
Confidence 99999999 9999999976 33345567776 56888762 3 388999999987654
No 122
>TIGR02288 PaaN_2 phenylacetic acid degradation protein paaN. This family includes sequences from Burkholderia, Bordetella, Streptomyces. Other PaaN enzymes are represented by a separate model, TIGR02278.
Probab=100.00 E-value=1.5e-65 Score=576.33 Aligned_cols=366 Identities=16% Similarity=0.130 Sum_probs=295.2
Q ss_pred HHHhcCCcceeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH-
Q 005047 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE- 346 (716)
Q Consensus 268 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~- 346 (716)
.+|++++.++++..++ . ++++++|++||+.|+++++.+|.++|++++++|++|.+||++++++|.|++..
T Consensus 70 ~~P~t~~~~~~~~~~~------~---~~av~aA~~A~~~W~~~~~~~R~~vL~~~a~~l~~~~~elA~~~~~etGk~~~~ 140 (551)
T TIGR02288 70 RSPYGVELGVTYPQCD------G---DALLDAAHAALPGWRDAGARARAGVCLEILQRLNARSFEIAHAVMHTTGQAFMM 140 (551)
T ss_pred cCCCCCCEEEEEcCCC------H---HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHhCCCHHH
Confidence 5578888888876665 3 88999999999999999999999999999999999999999999988765532
Q ss_pred ---hchhHHHHHHhhcCHHHHHHHHHHHHHHhcccc-cccccc---ccc-ccCCCeEEEEeecceeEEEEEcCC-Cch-h
Q 005047 347 ---AGYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQIL---KRT-ELADGLILEKTSCPLGVLLIVFES-RPD-A 416 (716)
Q Consensus 347 ---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~---~~~-~~~~~~~~~~~~~PlGVv~~I~p~-~P~-~ 416 (716)
+|++ .+....++.+++++.... ..+... +.. ........+..++|+|||++|+|| ||. +
T Consensus 141 a~e~gkp-----------~~~~r~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vI~PwNfP~~~ 209 (551)
T TIGR02288 141 AFQAGGP-----------HAQDRGLEAVAYAYREMSRIPETAVWEKPQGKNDPLKLKKRFTIVPRGIALVIGCSTFPTWN 209 (551)
T ss_pred HHhccCh-----------HHHHHHHHHHHHHHHHHHhccCcccccccCCCCCcccccceEEEEecCeEEEEcCcccHHHH
Confidence 2221 122333444554443211 112111 100 000011123478999999999998 796 4
Q ss_pred HHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC--CchHHHhhcCCCCccEEEeecCHHH
Q 005047 417 LVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS--REEIPDLLKLDDVIDLVIPRGSNKL 493 (716)
Q Consensus 417 ~~~~~~~ALaaGNtvv~Kps~~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~--~~~~~~~l~~~~~v~~v~fTGs~~~ 493 (716)
..+++++||++||+||+|||+.||+++.++.+++.+++.++ ||+|+||+|++ +.++++.|..||+|++|+||||+++
T Consensus 210 ~~~~l~~ALaaGN~VVlKPs~~tpl~~~~~~~~l~e~l~eAGlP~gvv~lv~g~~g~~~~~~L~~~p~v~~I~FTGSt~~ 289 (551)
T TIGR02288 210 TYPGLFASLATGNPVLVKPHPGAILPLALTVQVAREVLGEAGFDPNLVTLAAFDPGHEAAQRLATDPAVRIIDFTGSNAF 289 (551)
T ss_pred HHHHHHHHHHcCCeEEEECCcccchhHHHHHHHHHHHHHHcCcChhHEEEecCCCcHHHHHHHHhCCCccEEEEECCHHH
Confidence 68999999999999999999999998886666665666669 99999999995 5678888999999999999999999
Q ss_pred HHHHHHhcC-CCEEEecCCcceEEEcCCCCHHHHHHHHHHhcCCCCC-ccccccceEEEeCc---------cCChhhHHH
Q 005047 494 VSQIKESTK-IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMVETLLVHKD---------LACNGALNE 562 (716)
Q Consensus 494 g~~i~~~a~-~~~~lElGGk~p~iV~~dADl~~Aa~~iv~~~f~n~g-~C~a~~~rv~V~~~---------i~dd~f~~~ 562 (716)
|+.|++.+. +|+++|||||||+||++|||+|.|++.+++|+|.|+| +|+++ +|+|||++ +| |+|+++
T Consensus 290 G~~I~~~aa~~~v~lElGGknp~IV~~dADld~aa~~i~~~~f~~sGQ~Cta~-~ri~V~~~~i~~~~g~~i~-def~~~ 367 (551)
T TIGR02288 290 GQWLEQNARQAQVYTEKAGVNTVIIESTDDYKAMLRNLAFSLSLYSGQMCTTT-QAILVPRDGIRTDQGRKSY-DEVAAD 367 (551)
T ss_pred HHHHHHhcccCcEEeecCCcCeEEEcCCCCHHHHHHHHHHHHHhhCCCCCCCC-CEEEEeccccccccchhHH-HHHHHH
Confidence 999998875 8999999999999999999999999999999999987 99999 99999999 79 799999
Q ss_pred HHHHHHhcC-----------------------------CEEecCccc-----cc--cc-c-C----C-CCccccccccCc
Q 005047 563 LVVELQHEG-----------------------------VGLFGGPRA-----SK--LL-Q-I----P-ETRLFHHEYNSM 599 (716)
Q Consensus 563 l~~~~~~~~-----------------------------~~~~g~~~~-----~~--~~-p-v----~-~~~~~~eE~FGP 599 (716)
|+++++++- ..+.|+.+. .+ ++ | | + +|++++||+|||
T Consensus 368 L~~~~~~lvGdp~~~~~~~Gplis~~~~~ri~~a~~~G~v~~gG~~~~~~~~~g~~~~~Ptvl~~~~~d~~i~~eE~FGP 447 (551)
T TIGR02288 368 LATAIDGLLGDPARATAVLGAIQSPDTLARIAEARALGEVLLASTKIEHPEFPGARVRTPLLLKCDAADEAAYMQERFGP 447 (551)
T ss_pred HHHHHHHhcCCcccccccccCcCCHHHHHHHHHHHhCCCEEEcCccCCCCCCCCCEEeccEEEEcCCCCCHHHhCCCcCC
Confidence 999988751 012233221 12 23 5 2 3 689999999999
Q ss_pred eEEEEEeCCHHHHHHHHHhc--CCC-ceeEEEccCHHHHHHHHHcc----------CcceEEEcCCcCC
Q 005047 600 VCTVEIVDDVRAAIDHIHQH--GSA-HTDCIVAEDQKVAETFLCQV----------DSAAVFHNASTRF 655 (716)
Q Consensus 600 Vl~v~~~~~~deAi~~aN~~--~~G-L~a~i~t~d~~~a~~~~~~~----------~~G~v~vN~~~~~ 655 (716)
|++|++|+|+||||+++|++ +|| |++||||+|.++++++.+++ ++|.|+||.+..+
T Consensus 448 Vl~V~~~~d~deAi~~aN~~~~~~G~Lta~VfT~d~~~~~~~~~~~~~~~~~l~iN~~G~v~vN~~~~~ 516 (551)
T TIGR02288 448 IAFVVAVDDGAHAVELARRSVREKGAMTVGAYTTDPEVVDAVQEAAWDAAVALSLNLTGGVFVNQSAAF 516 (551)
T ss_pred EEEEEEECCHHHHHHHHhcCCCCCCCceEEEEeCCHHHHHHHHHHHHHhccCeeecCCceEEEccCCCC
Confidence 99999999999999999999 667 99999999999999999999 9999999986543
No 123
>PRK13805 bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional
Probab=100.00 E-value=3.6e-64 Score=600.95 Aligned_cols=385 Identities=17% Similarity=0.236 Sum_probs=312.7
Q ss_pred hhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhchhHHHHHHhhcCHHHHHHHHH
Q 005047 290 QVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAK 369 (716)
Q Consensus 290 ~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 369 (716)
.+||++++++|++||++|+++|.++|.++|++++++|++|+++|++++.+|.|++. .++.. .+....++
T Consensus 11 ~~~v~~av~~A~~A~~~w~~~~~~~R~~il~~~a~~l~~~~~~la~~~~~EtGk~~----~e~~~-------~~~~~~~~ 79 (862)
T PRK13805 11 VAELDALVEKAKKAQEEFATFTQEQVDKIVRAAALAALDARIPLAKMAVEETGRGV----VEDKV-------IKNHFASE 79 (862)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCh----HHHHH-------HHHHHHHH
Confidence 78999999999999999999999999999999999999999999999887765442 12211 13334444
Q ss_pred HHHHHhcccccccccccccccCCCeEEEEeecceeEEEEEcCC-Cch-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHH
Q 005047 370 SIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILH 447 (716)
Q Consensus 370 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~-~P~-~~~~~~~~ALaaGNtvv~Kps~~tp~t~~~l~ 447 (716)
.++++....+..|.. .. ..+...+++++|+|||++|+|| ||. +.++++++||++||+||+|||+.||+|+.+++
T Consensus 80 ~~~~~~~~~~~~g~~-~~---~~~~~~~~~~~P~GVv~~I~pwn~P~~~~~~~~~~ALaaGN~vVlKps~~a~~t~~~~~ 155 (862)
T PRK13805 80 YIYNSYKDEKTVGVI-EE---DDEFGIIEIAEPVGVIAGITPTTNPTSTAIFKALIALKTRNPIIFSFHPRAQKSSIAAA 155 (862)
T ss_pred HHHHHhcCCCccccc-Cc---CCCCCeEEEeecceEEEEEeCCCChhHHHHHHHHHHHHhCCcEEEECCcchHHHHHHHH
Confidence 454443322223321 11 1234567889999999999999 796 46789999999999999999999999999999
Q ss_pred HHHHHhcccc-cCcCceEEecC-CchHHHhhcCCCCccEEEeecCHHHHHHHHHhcCCCEEEecCCcceEEEcCCCCHHH
Q 005047 448 KVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDV 525 (716)
Q Consensus 448 ~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a~~~~~lElGGk~p~iV~~dADl~~ 525 (716)
+++++++.++ +|+|+||+|+| +.+.++.|..||+||+|+||||+++++.. ....+|+++|+|||||+||++||||++
T Consensus 156 ~l~~~~l~~aG~p~g~v~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~v~~~a-~~~~~pv~~e~gGk~p~iV~~dADl~~ 234 (862)
T PRK13805 156 KIVLDAAVAAGAPKDIIQWIEEPSVELTNALMNHPGIALILATGGPGMVKAA-YSSGKPALGVGAGNVPAYIDKTADIKR 234 (862)
T ss_pred HHHHHHHHHcCcCcccEEEecCCCHHHHHHHHcCCCccEEEecCCHHHHHHH-HhcCCCeEEECCCCCeEEEeCCCCHHH
Confidence 9999988889 99999999996 55677777789999999999999998766 345799999999999999999999999
Q ss_pred HHHHHHHhcCCCCC-ccccccceEEEeCccCChhhHHHHHHHHHhc-------------------CC--EEecCccc---
Q 005047 526 AKNIVIDAKIDYPA-ACNAMVETLLVHKDLACNGALNELVVELQHE-------------------GV--GLFGGPRA--- 580 (716)
Q Consensus 526 Aa~~iv~~~f~n~g-~C~a~~~rv~V~~~i~dd~f~~~l~~~~~~~-------------------~~--~~~g~~~~--- 580 (716)
|++.|+||+|.|+| +|+|+ +|+|||++|| |+|+++|+++...+ +. .+.|+...
T Consensus 235 Aa~~i~~~k~~n~GQ~C~a~-~~v~V~~~i~-d~f~~~l~~~g~~l~~~~~~~~v~~~i~~a~~~~~~~~~~g~~~~~~~ 312 (862)
T PRK13805 235 AVNDILLSKTFDNGMICASE-QAVIVDDEIY-DEVKEEFASHGAYFLNKKELKKLEKFIFGKENGALNADIVGQSAYKIA 312 (862)
T ss_pred HHHHHHHhhhccCCCccCCC-ceEEEehhhH-HHHHHHHHHhCCeeCCHHHHHHHHHHHhhccCCCcCccccCCCHHHHH
Confidence 99999999999876 99999 9999999999 79999987652110 01 12232110
Q ss_pred --cc-cc-c--------C----CCCccccccccCceEEEEEeCCHHHHHHHHHh----cCCCceeEEEccCHHHHHHHHH
Q 005047 581 --SK-LL-Q--------I----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQ----HGSAHTDCIVAEDQKVAETFLC 640 (716)
Q Consensus 581 --~~-~~-p--------v----~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~----~~~GL~a~i~t~d~~~a~~~~~ 640 (716)
.+ ++ | + +++++++ |+||||++|++|+|+||||+++|+ ++|||+++|||+|.+++++|++
T Consensus 313 ~~~G~~~~p~~~~~i~~l~~v~~~~~~~~-E~fgPVl~v~~~~~~deAi~~~n~~~~~~~~gl~~~i~t~d~~~~~~~~~ 391 (862)
T PRK13805 313 EMAGFKVPEDTKILIAEVKGVGESEPLSH-EKLSPVLAMYKAKDFEDAVEKAEKLVEFGGLGHTAVIYTNDDELIKEFGL 391 (862)
T ss_pred HHcCCCCCCCCeEEEEecCCCCCCCcchh-cccCcEEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHh
Confidence 02 12 2 2 3467776 799999999999999999999998 4899999999999999999999
Q ss_pred ccCcceEEEcCCc----------CCCCCCcccCcceeeccccccccccccchhcccEEEEEEEcCcee
Q 005047 641 QVDSAAVFHNAST----------RFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHV 698 (716)
Q Consensus 641 ~~~~G~v~vN~~~----------~~~~~~p~g~g~~sG~~~~~~~~~g~~gl~~ft~~k~v~~~~~~~ 698 (716)
++++|+|+||.++ .+.+.+|||+|. +|.+ ..+|+.|+++|++.|+|..+....
T Consensus 392 ~l~~g~v~vN~~~~~~~~~~~~~~~~~~~~fG~G~-~g~~----~~~g~~g~~~~~~~k~v~~~~~~~ 454 (862)
T PRK13805 392 RMKACRILVNTPSSQGGIGDLYNKLAPSLTLGCGS-WGGN----SVSENVGAKHLLNIKTVAKRRENM 454 (862)
T ss_pred hCCccEEEEeCCccccccccccCCcCccccccccC-CCCC----cCCCCCCHHHhheeeeeeeccccc
Confidence 9999999999886 457888999744 4443 245999999999999998765443
No 124
>KOG2454 consensus Betaine aldehyde dehydrogenase [Energy production and conversion]
Probab=100.00 E-value=2.5e-63 Score=502.88 Aligned_cols=419 Identities=17% Similarity=0.191 Sum_probs=350.3
Q ss_pred HHHhcCCcceeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHh
Q 005047 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 347 (716)
Q Consensus 268 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~ 347 (716)
++|.+|+-.|.++.-+ +.|+++.|..|++||++|.+.+..+|.+.|+.+.+.|.+|.|.+++...+|.|+.
T Consensus 69 ycPatg~yLG~fp~~~------~tdide~v~la~kAQktW~~ssF~~Rr~fL~~L~~yIi~nQdliaevacrDtGKT--- 139 (583)
T KOG2454|consen 69 YCPATGKYLGYFPALS------PTDIDERVTLARKAQKTWAQSSFKLRRQFLRILLKYIIENQDLIAEVACRDTGKT--- 139 (583)
T ss_pred ecCCCcceeeecccCC------hhhHHHHHHHHHHHHhhhhhccHHHHHHHHHHHHHHHhhchhheeeeeecccCch---
Confidence 5678899899998888 8899999999999999999999999999999999999999999998777776543
Q ss_pred chhHHHHHHhhcCHHHHHHHHHHHHHHhccc-ccccccccccccCCCeEEEEeecceeEEEEEcCC-Cch-hHHHHHHHH
Q 005047 348 GYAKSLVSRLALKPGKISSLAKSIRILADME-EPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 424 (716)
Q Consensus 348 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~-~P~-~~~~~~~~A 424 (716)
+.++.+.++..+.+.+.+++.+-++|.... ++.+.. .--.-.++.++|+||+++|.|| ||+ -.+.++..|
T Consensus 140 -mvDAs~GEIlvTlEKI~Wtl~~Ger~L~P~~Rpn~~~------~~yKg~~v~yePLGVI~aiVsWNYPfHN~lgPiiaA 212 (583)
T KOG2454|consen 140 -MVDASLGEILVTLEKITWTLSEGERWLKPESRPNGRA------MLYKGSRVEYEPLGVIGAIVSWNYPFHNILGPIIAA 212 (583)
T ss_pred -hhhhhHhHHHHHHHHhhhhhhcchhhcCCcCCCchhh------eeeccceEEEeecceEEEeeecCCchhhhhhHHHHH
Confidence 335555667777777777766655544321 111111 0012257889999999999999 786 467899999
Q ss_pred HHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecCCchHHHhhcCCCCccEEEeecCHHHHHHHHHhcC-
Q 005047 425 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK- 502 (716)
Q Consensus 425 LaaGNtvv~Kps~~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a~- 502 (716)
|.+||++|+|-||++.+++....|+++.+|+.- -||+++|++++-+++++.|.+|+.|++|.|.||..+++.|++.|+
T Consensus 213 lFsGNaIVvK~SE~~~WS~~fy~e~ir~~L~a~g~~p~LVq~itclpd~a~~ltSh~g~khitFiGSqpvak~i~~~AAk 292 (583)
T KOG2454|consen 213 LFSGNAIVVKVSEHASWSGCFYFEIIRAALAAVGAPPNLVQVITCLPDTAEALTSHSGVKHITFIGSQPVAKMIMRNAAK 292 (583)
T ss_pred HhcCCeEEEEeecceeeehhhHHHHHHHHHHHcCCCcchhheeecCcchHhHhhcCCCcceEEEecCcHHHHHHHHhhhh
Confidence 999999999999999999999999999998766 999999999987778999999999999999999999999998873
Q ss_pred --CCEEEecCCcceEEEcCCCCHHHHHHHHHHhcCCCCC-ccccccceEEEeCccCChhhHHHHHHHHHhcCC-------
Q 005047 503 --IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMVETLLVHKDLACNGALNELVVELQHEGV------- 572 (716)
Q Consensus 503 --~~~~lElGGk~p~iV~~dADl~~Aa~~iv~~~f~n~g-~C~a~~~rv~V~~~i~dd~f~~~l~~~~~~~~~------- 572 (716)
+|++||||||+|+||++||||+..+..+++|-|..+| .|++. +|++||+++| |.|+..|-++++....
T Consensus 293 ~LTPv~lELGGKDafIi~dda~l~~v~si~mRGtfQSsGQNCiGi-ER~iv~k~~Y-d~~i~~l~~rv~s~r~G~~~~~~ 370 (583)
T KOG2454|consen 293 TLTPVTLELGGKDAFIICDDADLSHVASIAMRGTFQSSGQNCIGI-ERFIVHKDIY-DAFIGQLTKRVKSVRAGPPLTGR 370 (583)
T ss_pred hcCcEEEeecCcccEEEeccccHHHHHHHHHhhhhhhcCCcccce-eEEEEecchH-HHHHHHHHHHHHHHHcCCCccCc
Confidence 8999999999999999999999999999999999877 99999 9999999999 7999999888876421
Q ss_pred ---------------------------EE-ecCccc-------cccc-c---C---CCCccccccccCceEEEEEeCCHH
Q 005047 573 ---------------------------GL-FGGPRA-------SKLL-Q---I---PETRLFHHEYNSMVCTVEIVDDVR 610 (716)
Q Consensus 573 ---------------------------~~-~g~~~~-------~~~~-p---v---~~~~~~~eE~FGPVl~v~~~~~~d 610 (716)
++ .||.|. ..|| | | +.|+|+|||.|||+++|+++++.|
T Consensus 371 vDMGAm~s~nrfdhLesLv~DAv~KGArl~~gGsrF~Hpkyp~g~YF~PTlLvdvt~eMKIaqeE~FgPI~~im~ak~~e 450 (583)
T KOG2454|consen 371 VDMGAMCSQNRFDHLESLVNDAVDKGARLAVGGSRFGHPKYPVGQYFPPTLLVDVTHEMKIAQEEAFGPIMPIMQAKTDE 450 (583)
T ss_pred cchhhhhhccchHHHHHHHHHHHhhcchhhhcccccCCCCCCcccccCCeEEEecCchhhhHhhhccccchhhhhcCChH
Confidence 11 122221 1234 4 2 469999999999999999999999
Q ss_pred HHHHHHHhcCCCceeEEEccCHHHHHHHHHccCcceEEEcCCcCC-CCCCcccCcceeeccccccccccccchhcccEEE
Q 005047 611 AAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRF-CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTR 689 (716)
Q Consensus 611 eAi~~aN~~~~GL~a~i~t~d~~~a~~~~~~~~~G~v~vN~~~~~-~~~~p~g~g~~sG~~~~~~~~~g~~gl~~ft~~k 689 (716)
++|+++|+++|||+++||+.|..++.+++.++++|+|.||+...+ ...+||||.+.||+| + ..|.+|++..++.|
T Consensus 451 h~i~lAN~s~fgLG~sVFg~dk~~c~y~a~~lqtG~vAiNDFasfY~cQlPFGG~k~SGyG--r--FaG~EGLrg~Cn~K 526 (583)
T KOG2454|consen 451 HVIKLANDSRFGLGCSVFGGDKHRCKYIASQLQTGVVAINDFASFYMCQLPFGGVKDSGYG--R--FAGIEGLRGCCNVK 526 (583)
T ss_pred HHHhhccCCcccccceeccccHHHHHHHHhhhhccceeehhhhhhheeccccCCccCCCcc--c--cccHHHHHHHhccc
Confidence 999999999999999999999999999999999999999996544 456999999999986 3 35899999999999
Q ss_pred EEEEcC-ceee-eCCCCceee
Q 005047 690 WILRGN-GHVV-DGDQGVVYT 708 (716)
Q Consensus 690 ~v~~~~-~~~~-~~~~~~~~~ 708 (716)
+|.+.. .... +-+-++.|.
T Consensus 527 sv~yd~~~~~~t~ip~aldyp 547 (583)
T KOG2454|consen 527 SVAYDRVAENATEIPEALDYP 547 (583)
T ss_pred ceeccchhhhhccCCcccccc
Confidence 998763 2222 344445443
No 125
>cd07127 ALDH_PAD-PaaZ Phenylacetic acid degradation proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida)-like. Phenylacetic acid degradation (PAD) proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida) are putative aromatic ring cleavage enzymes of the aerobic PA catabolic pathway. PaaZ mutants were defective for growth with PA as a sole carbon source due to interruption of the putative ring opening system. This CD is limited to bacterial monofunctional enzymes.
Probab=100.00 E-value=1.6e-61 Score=545.30 Aligned_cols=391 Identities=16% Similarity=0.134 Sum_probs=303.8
Q ss_pred hhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhchhHHHHHHhhcCHHHHHHHHHH
Q 005047 291 VGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKS 370 (716)
Q Consensus 291 ~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 370 (716)
.++++++++|++||+.|+++++.+|.++|++++++|++++++|+++++.|.|+++.+ +.- .....+++..++.
T Consensus 84 adv~~ai~aA~~A~~~W~~~~~~~R~~il~~~a~~l~~~~~ela~a~~~e~Gk~~~~----a~q---a~~~~evd~a~e~ 156 (549)
T cd07127 84 CDPDALLAAARAAMPGWRDAGARARAGVCLEILQRLNARSFEMAHAVMHTTGQAFMM----AFQ---AGGPHAQDRGLEA 156 (549)
T ss_pred HHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHCCCHHH----HHh---cccHHHHHHHHHH
Confidence 389999999999999999999999999999999999999999999998887665421 110 0000245555555
Q ss_pred HHHHhccccc-ccccc---cccc-cCCCeEEEEeecceeEEEEEcCC-Cchh-HHHHHHHHHHhCCEEEEeCCcchHHHH
Q 005047 371 IRILADMEEP-IGQIL---KRTE-LADGLILEKTSCPLGVLLIVFES-RPDA-LVQIASLAIRSGNGLLLKGGKEAMRSN 443 (716)
Q Consensus 371 ~~~~~~~~~~-~g~~~---~~~~-~~~~~~~~~~~~PlGVv~~I~p~-~P~~-~~~~~~~ALaaGNtvv~Kps~~tp~t~ 443 (716)
++++...... .+... +... .+.....+..++|+|||++|+|| ||.+ ++.++++||++||+||+|||+.||+++
T Consensus 157 ~~~a~~~~~~~~~~~~w~~~~~~~~~l~~~k~~~~~P~GVv~vI~p~nfP~~~~~~~i~~ALaaGN~VVvKPs~~a~ls~ 236 (549)
T cd07127 157 VAYAWREMSRIPPTAEWEKPQGKHDPLAMEKTFTVVPRGVALVIGCSTFPTWNGYPGLFASLATGNPVIVKPHPAAILPL 236 (549)
T ss_pred HHHHHHHHHhccccccccCCCCCcccccccceeEEecccEEEEEeCcCChHHHHHHHHHHHHhcCCeEEEECCcccchhH
Confidence 5554432211 11100 0000 00011113467999999999998 7864 578999999999999999999999999
Q ss_pred HHHHHHHHHhcccc-cCcCceEEecC--CchHHHhhcCCCCccEEEeecCHHHHHHHHHhcC-CCEEEecCCcceEEEcC
Q 005047 444 AILHKVITSAIPDT-VGEKLIGLVTS--REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK-IPVLGHADGICHVYVDK 519 (716)
Q Consensus 444 ~~l~~l~~~al~~a-lP~gvv~vv~~--~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a~-~~~~lElGGk~p~iV~~ 519 (716)
.++.+++.+++.|+ ||+|+||+|++ ++++++.|..||+|++|.||||+++|+.|++.+. +|+++|||||||+||++
T Consensus 237 ~~~~~~i~~~l~eAGlP~gvv~~v~g~~~~~~~~~L~~~p~v~~I~FTGS~~~G~~i~~~a~~~~v~~ElGGkn~~IV~~ 316 (549)
T cd07127 237 AITVQVAREVLAEAGFDPNLVTLAADTPEEPIAQTLATRPEVRIIDFTGSNAFGDWLEANARQAQVYTEKAGVNTVVVDS 316 (549)
T ss_pred HHHHHHHHHHHHHcCcCcccEEEEeCCCcHHHHHHHHhCCCCCEEEEECCHHHHHHHHHHhccCcEEEecCCcCeEEECC
Confidence 88787777777789 99999999985 3568888889999999999999999999998875 89999999999999999
Q ss_pred CCCHHHHHHHHHHhcCCCCC-ccccccceEEEeCc---------cCChhhHHHHHHHHHhcC------------------
Q 005047 520 SANLDVAKNIVIDAKIDYPA-ACNAMVETLLVHKD---------LACNGALNELVVELQHEG------------------ 571 (716)
Q Consensus 520 dADl~~Aa~~iv~~~f~n~g-~C~a~~~rv~V~~~---------i~dd~f~~~l~~~~~~~~------------------ 571 (716)
|||++.|++.+++|+|.|+| .|+++ +|+|||++ +| |+|+++|+++++++-
T Consensus 317 dADl~~aa~~i~~~~f~~sGQ~C~a~-~ri~V~~s~i~~~~g~~i~-d~f~~~L~~~~~~l~Gdp~~~~~~~Gpli~~~~ 394 (549)
T cd07127 317 TDDLKAMLRNLAFSLSLYSGQMCTTP-QNIYVPRDGIQTDDGRKSF-DEVAADLAAAIDGLLADPARAAALLGAIQSPDT 394 (549)
T ss_pred CCCHHHHHHHHHHHHHccCCCCCCCC-CEEEEECCccccccchhHH-HHHHHHHHHHHHHhcCCccccccccCCcCCHHH
Confidence 99999999999999999987 99999 99999999 89 799999999988751
Q ss_pred -----------CEEecCccc-----cc-cc--c-C-----CCCccccccccCceEEEEEeCCHHHHHHHHHhcC--C-Cc
Q 005047 572 -----------VGLFGGPRA-----SK-LL--Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHG--S-AH 623 (716)
Q Consensus 572 -----------~~~~g~~~~-----~~-~~--p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~--~-GL 623 (716)
.-+.|+... .+ ++ | | ++|++++||+||||++|++|+|.||||+++|++. | ||
T Consensus 395 ~~ri~~a~~~g~vl~gg~~~~~~~~~g~~~~~Ptvl~~~~~d~~i~~eE~FGPVl~V~~~~d~~eai~~an~~~~~~ggL 474 (549)
T cd07127 395 LARIAEARQLGEVLLASEAVAHPEFPDARVRTPLLLKLDASDEAAYAEERFGPIAFVVATDSTDHSIELARESVREHGAM 474 (549)
T ss_pred HHHHHHHHhCCCEEEcCCcCCCcCCCCceEEeCEEEEeCCCCCHHHcCCCcCceEEEEEeCCHHHHHHHHHhcccCCCCc
Confidence 012233221 12 23 6 2 3689999999999999999999999999999984 5 69
Q ss_pred eeEEEccCHHHHHHHHHc-cCcc-eEEEcCCcCCCCC--CcccCcceeeccccccccccccchhcccEEEEEEE
Q 005047 624 TDCIVAEDQKVAETFLCQ-VDSA-AVFHNASTRFCDG--ARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILR 693 (716)
Q Consensus 624 ~a~i~t~d~~~a~~~~~~-~~~G-~v~vN~~~~~~~~--~p~g~g~~sG~~~~~~~~~g~~gl~~ft~~k~v~~ 693 (716)
++||||+|.+.++++.++ .++| +++||........ .|||+.+.||... ..+.....-.|...|-.++
T Consensus 475 t~sVfs~D~~~~~~~~~~~~~~~~~~~iN~tg~v~~~q~~~Fg~~~~sg~n~---~a~~~~~~~~fv~~r~~~~ 545 (549)
T cd07127 475 TVGVYSTDPEVVERVQEAALDAGVALSINLTGGVFVNQSAAFSDFHGTGANP---AANAALTDGAFVANRFRVV 545 (549)
T ss_pred eEEEEcCCHHHHHHHHHHHHHhcCcEEEcCCceEEEecCcCCCCCCCCCCCc---ccccccchhhhhhcceEEE
Confidence 999999999999999997 6676 9999943322233 4599888777542 2234455556666554444
No 126
>cd07078 ALDH NAD(P)+ dependent aldehyde dehydrogenase family. The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer
Probab=100.00 E-value=1.1e-60 Score=534.32 Aligned_cols=374 Identities=21% Similarity=0.256 Sum_probs=315.7
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhchhHHHHHHhhcCHHHHHHHHHHHHHH
Q 005047 295 EMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRIL 374 (716)
Q Consensus 295 ~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (716)
+++++|++||+.|++++.++|.++|+++++.|.++.++|++++++|+++..+ +. ..++..+++.++++
T Consensus 2 ~av~~a~~a~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~etG~~~~----~~--------~~ei~~~i~~l~~~ 69 (432)
T cd07078 2 AAVAAARAAFKAWAALPPAERAAILRKLADLLEERREELAALETLETGKPIE----EA--------LGEVARAADTFRYY 69 (432)
T ss_pred HHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH----HH--------HHHHHHHHHHHHHH
Confidence 6889999999999999999999999999999999999999998877654321 11 23455555555554
Q ss_pred hccccc-ccccccccccCCCeEEEEeecceeEEEEEcCC-Cch-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHH
Q 005047 375 ADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVIT 451 (716)
Q Consensus 375 ~~~~~~-~g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~-~P~-~~~~~~~~ALaaGNtvv~Kps~~tp~t~~~l~~l~~ 451 (716)
+...+. .+..... ...+...+.+++|+|||++|+|| +|. ..++.+++||++||+||+|||+.+|.++.++++++.
T Consensus 70 ~~~~~~~~~~~~~~--~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~AL~aGN~vilkps~~~~~~~~~l~~~l~ 147 (432)
T cd07078 70 AGLARRLHGEVIPS--PDPGELAIVRREPLGVVGAITPWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALLLAELLA 147 (432)
T ss_pred HHHHHHhcCccccc--cCCCceEEEEEeecceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHH
Confidence 433222 1211111 12345567889999999999998 695 578999999999999999999999999999999998
Q ss_pred Hhcccc-cCcCceEEecC-CchHHHhhcCCCCccEEEeecCHHHHHHHHHhcC---CCEEEecCCcceEEEcCCCCHHHH
Q 005047 452 SAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK---IPVLGHADGICHVYVDKSANLDVA 526 (716)
Q Consensus 452 ~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a~---~~~~lElGGk~p~iV~~dADl~~A 526 (716)
+ + +|+|+++++++ .++.+..|..|+++|+|+||||+.+|+.|++.+. +|+++|+|||||+||++|||++.|
T Consensus 148 ~----ag~p~~~~~~~~~~~~~~~~~l~~~~~i~~v~ftGs~~~~~~v~~~a~~~~~~~~~e~gg~~~~iV~~~ad~~~a 223 (432)
T cd07078 148 E----AGLPPGVLNVVTGDGDEVGAALASHPRVDKISFTGSTAVGKAIMRAAAENLKRVTLELGGKSPLIVFDDADLDAA 223 (432)
T ss_pred H----cCCCcCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhccCcEEEecCCCCeeEECCCCCHHHH
Confidence 6 7 89999999996 4446777778999999999999999999988774 899999999999999999999999
Q ss_pred HHHHHHhcCCCCC-ccccccceEEEeCccCChhhHHHHHHHHHhcCC---------------------------------
Q 005047 527 KNIVIDAKIDYPA-ACNAMVETLLVHKDLACNGALNELVVELQHEGV--------------------------------- 572 (716)
Q Consensus 527 a~~iv~~~f~n~g-~C~a~~~rv~V~~~i~dd~f~~~l~~~~~~~~~--------------------------------- 572 (716)
++.+++++|.|+| .|+++ +++|||++++ |+|+++|+++++++..
T Consensus 224 a~~i~~~~~~~~Gq~C~a~-~~i~v~~~~~-~~~~~~L~~~l~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g 301 (432)
T cd07078 224 VKGAVFGAFGNAGQVCTAA-SRLLVHESIY-DEFVERLVERVKALKVGNPLDPDTDMGPLISAAQLDRVLAYIEDAKAEG 301 (432)
T ss_pred HHHHHHHHHhccCCCccCC-ceEEEcHHHH-HHHHHHHHHHHHccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCC
Confidence 9999999999977 99999 9999999999 7999999999886531
Q ss_pred -EE-ecCcccc---c-cc-c-C-----CCCccccccccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEccCHHHHHHHH
Q 005047 573 -GL-FGGPRAS---K-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFL 639 (716)
Q Consensus 573 -~~-~g~~~~~---~-~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~i~t~d~~~a~~~~ 639 (716)
++ +|++... + ++ | | +++++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.+++++
T Consensus 302 ~~~~~gg~~~~~~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~~l~~~i~t~d~~~~~~~~ 381 (432)
T cd07078 302 AKLLCGGKRLEGGKGYFVPPTVLTDVDPDMPIAQEEIFGPVLPVIPFKDEEEAIELANDTEYGLAAGVFTRDLERALRVA 381 (432)
T ss_pred CEEEeCCccCCCCCCcEEccEEEecCCCCChhhhCCCcCceEEEEEeCCHHHHHHHHhCCCcCceEEEECCCHHHHHHHH
Confidence 12 2333221 2 33 5 2 35789999999999999999999999999999999999999999999999999
Q ss_pred HccCcceEEEcCCcCC-CCCCcccCcceeeccccccccccccchhcccEEEEEE
Q 005047 640 CQVDSAAVFHNASTRF-CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 692 (716)
Q Consensus 640 ~~~~~G~v~vN~~~~~-~~~~p~g~g~~sG~~~~~~~~~g~~gl~~ft~~k~v~ 692 (716)
+++++|.|+||++... .+..||||.+.||+| +++|++|+++|++.|+|.
T Consensus 382 ~~~~~g~v~iN~~~~~~~~~~pfgG~~~sg~g----~~~g~~~~~~~~~~k~v~ 431 (432)
T cd07078 382 ERLEAGTVWINDYSVGAEPSAPFGGVKQSGIG----REGGPYGLEEYTEPKTVT 431 (432)
T ss_pred HhcCcceEEECCCCCCCCCCCCcCCcCcCcCC----ccchHHHHHHhhceEEEE
Confidence 9999999999998776 778999999998875 457999999999999875
No 127
>COG0014 ProA Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism]
Probab=100.00 E-value=7.8e-59 Score=480.54 Aligned_cols=408 Identities=43% Similarity=0.733 Sum_probs=390.8
Q ss_pred hhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhchhHHHHHHhhcCHHHHHHHHHH
Q 005047 291 VGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKS 370 (716)
Q Consensus 291 ~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 370 (716)
.++.+..++||+|+...+.++.++|.+.|.++|+.|+++.++|.+++.+|++.++++|+++++++|+..+..+++.+++.
T Consensus 3 ~~~~~~~~~Ak~A~~~La~~st~~Kn~aL~a~A~~L~~~~~~IL~AN~~Dl~~are~gl~~~m~DRL~L~~~Ri~~ma~g 82 (417)
T COG0014 3 SELEELGKRAKAASRKLATLSTEEKNRALLAMADALEAARAEILAANAKDLAAARENGLSEAMLDRLALTPSRIEAMADG 82 (417)
T ss_pred hHHHHHHHHHHHHHHHHhhcChhhHHHHHHHHHHHHHHhHHHHHHhhHHHHHHHHHcCCcHHHHHHHcCCHHHHHHHHHH
Confidence 36778889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcccccccccccccccCCCeEEEEeecceeEEEEEcCCCchhHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHH
Q 005047 371 IRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVI 450 (716)
Q Consensus 371 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~~P~~~~~~~~~ALaaGNtvv~Kps~~tp~t~~~l~~l~ 450 (716)
++..+.+++|+|+....+..+.|.+.+.+|.|+||+++|+..+|++++...+.||++||+||+|.+..+-.|...|++++
T Consensus 83 l~~Va~L~DPvGev~~~~~~~nGL~i~~~rvPLGVigvIYEsRPnVtvdaaaLclKsGNAvILRGGsea~~Sn~ai~~~i 162 (417)
T COG0014 83 LRQVAALPDPVGEVIDGWTLPNGLQIYRVRVPLGVIGVIYESRPNVTVDAAALCLKSGNAVILRGGSEAIHSNAAIVEVI 162 (417)
T ss_pred HHHHhcCCCchHhhhccccCCCCCEEEEEEccceEEEEEEecCCccHHHHHHHHHhcCCEEEEeCcHHHhhhHHHHHHHH
Confidence 99999999999998887778889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcccc-cCcCceEEec--CCchHHHhhcCCCCccEEEeecCHHHHHHHHHhcCCCEEEecCCcceEEEcCCCCHHHHH
Q 005047 451 TSAIPDT-VGEKLIGLVT--SREEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAK 527 (716)
Q Consensus 451 ~~al~~a-lP~gvv~vv~--~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a~~~~~lElGGk~p~iV~~dADl~~Aa 527 (716)
+++|.++ +|++.||+++ +.+++.++|..+..||+|+..||....+.|.+.+..||+..+-|++++||+++||+|+|.
T Consensus 163 ~~aL~~~~lP~~aVqli~~~~R~~v~~ll~l~~yiD~iIPRGg~~Li~~v~~~a~vPVi~~~~G~CHiyvd~~ADld~A~ 242 (417)
T COG0014 163 QEALEKAGLPADAVQLIEDTDREEVLELLRLDGYIDLVIPRGGAGLIRRVVENATVPVIEHGVGNCHIYVDESADLDKAL 242 (417)
T ss_pred HHHHHHcCCCHHHhhhccCCCHHHHHHHHhhcCceeEEEcCCcHHHHHHHHhCCcCCEEecCcceEEEEecccCCHHHHH
Confidence 9999999 9999999998 478899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCccccccceEEEeCccCChhhHHHHHHHHHhcCCEEecCcccccccc-C---CCCccccccccCceEEE
Q 005047 528 NIVIDAKIDYPAACNAMVETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLQ-I---PETRLFHHEYNSMVCTV 603 (716)
Q Consensus 528 ~~iv~~~f~n~g~C~a~~~rv~V~~~i~dd~f~~~l~~~~~~~~~~~~g~~~~~~~~p-v---~~~~~~~eE~FGPVl~v 603 (716)
+.++++|......|++. +.++||+.+. ++|+.+|.+.+...|+++.|++....++| . .+...|..|+..++++|
T Consensus 243 ~ii~nAKtqrPs~CNA~-EtLLVh~~ia-~~fLp~l~~~l~~~gvelr~d~~~~~~~~~~~~~A~e~Dw~tEyLd~ilav 320 (417)
T COG0014 243 KIIVNAKTQRPSVCNAA-ETLLVHRAIA-KSFLPKLANALQEAGVELRGDAEALALLPDAVKPATEEDWDTEYLDLILAV 320 (417)
T ss_pred HHHHcccCCCCcccchH-HHHHcCHHHH-HHhHHHHHHHHHhcCeEEEcCHHHHHhccccCCCCchhhHHHHhhhheeEE
Confidence 99999999999999999 9999999999 89999999999999999988876655565 2 25678999999999999
Q ss_pred EEeCCHHHHHHHHHhcCCCceeEEEccCHHHHHHHHHccCcceEEEcCCcCCCCCCcccCcceeeccccccccccccchh
Q 005047 604 EIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVE 683 (716)
Q Consensus 604 ~~~~~~deAi~~aN~~~~GL~a~i~t~d~~~a~~~~~~~~~G~v~vN~~~~~~~~~p~g~g~~sG~~~~~~~~~g~~gl~ 683 (716)
..++++||||+.+|.++.+||-+|.|+|...+++|.+++++..||||.+++|.++..||+|.+.|+|+++.|.+||.|++
T Consensus 321 kvVd~ld~AI~HIn~y~S~HsdaIiTe~~~~a~~F~~~VDSAaVyvNASTRFtDG~~fG~GaEiGISTqKlHARGPmGLe 400 (417)
T COG0014 321 KVVDSLDEAIAHINTYGSGHSDAIITEDYANAERFVNEVDSAAVYVNASTRFTDGGQFGLGAEIGISTQKLHARGPMGLE 400 (417)
T ss_pred EEeCCHHHHHHHHHHhCCCCCcceeeCCHHHHHHHHhhcchheEEEecccccccCccccCceEEEeecCcccCCCCCChh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccEEEEEEEcCceeee
Q 005047 684 GLLTTRWILRGNGHVVD 700 (716)
Q Consensus 684 ~ft~~k~v~~~~~~~~~ 700 (716)
++|..|++..+.||+|+
T Consensus 401 ~LTs~Kyiv~G~Gqvr~ 417 (417)
T COG0014 401 ALTSYKYIVRGDGQVRP 417 (417)
T ss_pred hhcceeEEEeCCceecC
Confidence 99999999999999884
No 128
>cd06534 ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase superfamily. The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydri
Probab=100.00 E-value=6.1e-59 Score=509.16 Aligned_cols=355 Identities=22% Similarity=0.252 Sum_probs=302.7
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhchhHHHHHHhhcCHHHHHHHHHHHHHHhccc
Q 005047 299 AARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRILADME 378 (716)
Q Consensus 299 ~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (716)
+|++||++|++++.++|.++|+++++.|.++.++|++++..|++++.. ++ ..|+...++.+++++...
T Consensus 2 ~a~~a~~~w~~~~~~~R~~~l~~l~~~l~~~~~~l~~~~~~e~Gk~~~----~~--------~~ev~~~~~~l~~~~~~~ 69 (367)
T cd06534 2 AARAAFKAWAALPPAERAAILRKIADLLEERREELAALETLETGKPIE----EA--------LGEVARAIDTFRYAAGLA 69 (367)
T ss_pred hHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHH----HH--------HHHHHHHHHHHHHHHHHH
Confidence 689999999999999999999999999999999999998877654321 11 235555666666555432
Q ss_pred ccc-cccccccccCCCeEEEEeecceeEEEEEcCC-Cchh-HHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcc
Q 005047 379 EPI-GQILKRTELADGLILEKTSCPLGVLLIVFES-RPDA-LVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIP 455 (716)
Q Consensus 379 ~~~-g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~-~P~~-~~~~~~~ALaaGNtvv~Kps~~tp~t~~~l~~l~~~al~ 455 (716)
+.. +...+ ....+...+.+++|+|||++|+|| +|.+ .++++++||++||+||+|||+.+|.++..+++++.+
T Consensus 70 ~~~~~~~~~--~~~~~~~~~~~~~p~Gvv~~i~p~n~p~~~~~~~~~~aL~~GN~vilk~s~~~~~~~~~l~~~l~~--- 144 (367)
T cd06534 70 DKLGGPELP--SPDPGGEAYVRREPLGVVGVITPWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALALAELLQE--- 144 (367)
T ss_pred HHhcCCccc--ccCCCceeEEEEEeeeEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHh---
Confidence 211 11111 112345677889999999999998 5865 789999999999999999999999999999999986
Q ss_pred cc-cCcCceEEecC-CchHHHhhcCCCCccEEEeecCHHHHHHHHHhcC---CCEEEecCCcceEEEcCCCCHHHHHHHH
Q 005047 456 DT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK---IPVLGHADGICHVYVDKSANLDVAKNIV 530 (716)
Q Consensus 456 ~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a~---~~~~lElGGk~p~iV~~dADl~~Aa~~i 530 (716)
+ +|+|+++++++ .++.++.|..|+++|.|+||||+++++.|.+.+. +|+++|+||+||+||++|||+++|++.+
T Consensus 145 -ag~p~~~v~~~~~~~~~~~~~l~~~~~vd~v~~tGs~~~~~~v~~~~~~~~~~~~~e~~g~~~~iV~~~ad~~~aa~~i 223 (367)
T cd06534 145 -AGLPPGVVNVVPGGGDEVGAALLSHPRVDKISFTGSTAVGKAIMKAAAENLKPVTLELGGKSPVIVDEDADLDAAVEGA 223 (367)
T ss_pred -cCCCcCeEEEEEcCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhcCCCeEEEEcCCCCeEEECCCCCHHHHHHHH
Confidence 7 89999999996 4457777878999999999999999999988774 8999999999999999999999999999
Q ss_pred HHhcCCCCC-ccccccceEEEeCccCChhhHHHHHHHHHhcCCEEecCccccccccCCCCccccccccCceEEEEEeCCH
Q 005047 531 IDAKIDYPA-ACNAMVETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLQIPETRLFHHEYNSMVCTVEIVDDV 609 (716)
Q Consensus 531 v~~~f~n~g-~C~a~~~rv~V~~~i~dd~f~~~l~~~~~~~~~~~~g~~~~~~~~pv~~~~~~~eE~FGPVl~v~~~~~~ 609 (716)
++++|.++| .|+++ ++||||++++ |+|+++|+ .++.... +++++++||+||||++|++|+|+
T Consensus 224 ~~~~~~~~gq~C~s~-~~v~v~~~~~-~~f~~~l~--------tl~~~~~-------~~~~~~~~E~fgPv~~v~~~~~~ 286 (367)
T cd06534 224 VFGAFFNAGQICTAA-SRLLVHESIY-DEFVEKLV--------TVLVDVD-------PDMPIAQEEIFGPVLPVIRFKDE 286 (367)
T ss_pred HHHHHhcCCCCCCCC-cEEEEcHHHH-HHHHHhhc--------eeeeCCC-------CCCccccCCccCceEEEEecCCH
Confidence 999999976 99999 9999999999 79998886 2221100 24578999999999999999999
Q ss_pred HHHHHHHHhcCCCceeEEEccCHHHHHHHHHccCcceEEEcCCcCC-CCCCcccCcceeeccccccccccccchhcccEE
Q 005047 610 RAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRF-CDGARFGLGAEVGISTSRIHARGPVGVEGLLTT 688 (716)
Q Consensus 610 deAi~~aN~~~~GL~a~i~t~d~~~a~~~~~~~~~G~v~vN~~~~~-~~~~p~g~g~~sG~~~~~~~~~g~~gl~~ft~~ 688 (716)
||||+++|++++||++||||+|...++++++++++|.|+||+++.. .+..||||.++||+|. ++|++++++||+.
T Consensus 287 ~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgg~~~sG~g~----~~g~~~~~~~~~~ 362 (367)
T cd06534 287 EEAIALANDTEYGLTAGVFTRDLNRALRVAERLRAGTVYINDSSIGVGPEAPFGGVKNSGIGR----EGGPYGLEEYTRT 362 (367)
T ss_pred HHHHHHHhCCCCCCeEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCcccCccCC----CChHHHHHHhceE
Confidence 9999999999999999999999999999999999999999998777 7789999999998863 4699999999999
Q ss_pred EEEE
Q 005047 689 RWIL 692 (716)
Q Consensus 689 k~v~ 692 (716)
|+|.
T Consensus 363 k~i~ 366 (367)
T cd06534 363 KTVV 366 (367)
T ss_pred EEEe
Confidence 9874
No 129
>KOG2452 consensus Formyltetrahydrofolate dehydrogenase [Nucleotide transport and metabolism]
Probab=100.00 E-value=7.6e-58 Score=471.99 Aligned_cols=379 Identities=15% Similarity=0.175 Sum_probs=313.0
Q ss_pred HHhcCCcceeEEecCCccccchhhHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Q 005047 269 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSR--RLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 346 (716)
Q Consensus 269 ~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~ 346 (716)
+|.++..++.+..+. -.||++|+++|+.||+ +|++++..+|.+.|.++++++++|.|||+.+.+.|-+..
T Consensus 443 np~~~~~ic~~~la~------v~dvd~av~aak~afe~g~w~~~sar~rg~~~y~la~lme~h~eelat~e~ldagav-- 514 (881)
T KOG2452|consen 443 NPTDGSVICQVSLAQ------VTDVDKAVAAAKGAFENGRWGKISARDRGRLMYRLADLMEQHQEELATIEALDAGAV-- 514 (881)
T ss_pred CCCCCCeeEEeehhH------hhhHHHHHHHHhhhhhcCcccccchhhhhhhhhhccchhhhccchhhhhhhccccce--
Confidence 445555556655555 6799999999999998 599999999999999999999999999998766554322
Q ss_pred hchhHHHHHHhhcCHHHHHHHHHHHHHHhccccc-cccccccccc-CCCeEEEEeecceeEEEEEcCC-Cch-hHHHHHH
Q 005047 347 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTEL-ADGLILEKTSCPLGVLLIVFES-RPD-ALVQIAS 422 (716)
Q Consensus 347 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~-~~~~~~~~~~~PlGVv~~I~p~-~P~-~~~~~~~ 422 (716)
++-++ ...+...++..||+++|.+. .|.++|.... +......+.++|+|||++|+|| ||+ +..|+.+
T Consensus 515 --ytlal-------kthvgmsi~~~ryfagwcdkiqg~tipi~~arpn~nl~lt~~epigv~g~i~pwnyplmmlswk~a 585 (881)
T KOG2452|consen 515 --YTLAL-------KTHVGMSIQTFRYFAGWCDKIQGSTIPINQARPNRNLTLTRKEPVGVCGIIIPWNYPLMMLSWKTA 585 (881)
T ss_pred --eeeee-------hhhcCceehHHHHhhhhhhhccCceeccccCCCCCcceeeecCcceeEEEeccCCchHHHHHHHHH
Confidence 11111 12455667888999988764 5666654322 2333567899999999999999 796 5679999
Q ss_pred HHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccccCcCceEEecC-CchHHHhhcCCCCccEEEeecCHHHHHHHHHhc
Q 005047 423 LAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDTVGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST 501 (716)
Q Consensus 423 ~ALaaGNtvv~Kps~~tp~t~~~l~~l~~~al~~alP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a 501 (716)
.+|+|- -..++++ .||+|+++| ++.+|+-|..||+|++|-||||+++|+.||+.|
T Consensus 586 aclaa~--------------~~k~~e~----------sgvini~~gsgslvg~rls~hpdvrkigftgsteig~~im~sc 641 (881)
T KOG2452|consen 586 ACLAAQ--------------VLKFAEL----------TGVVNVLPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSC 641 (881)
T ss_pred HHHHHH--------------Hhhhhhh----------cceEEEecCCcchhccccccCCccceeccccchHHHHHHHHHH
Confidence 888852 1223333 489999995 788999999999999999999999999999998
Q ss_pred C----CCEEEecCCcceEEEcCCCCHHHHHHHHHHhcCCCCC-ccccccceEEEeCccCChhhHHHHHHHHHhcCC----
Q 005047 502 K----IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMVETLLVHKDLACNGALNELVVELQHEGV---- 572 (716)
Q Consensus 502 ~----~~~~lElGGk~p~iV~~dADl~~Aa~~iv~~~f~n~g-~C~a~~~rv~V~~~i~dd~f~~~l~~~~~~~~~---- 572 (716)
+ |++.|||||++|+|++.||||++|++....+.|+|-| .|++. -|+||.+||+ |+|+++++++++++++
T Consensus 642 a~snikkvslelgg~sp~iifad~dl~kav~~~~~~vff~kgenciaa-gr~fi~~sih-d~fv~~~vee~~~~~ig~pl 719 (881)
T KOG2452|consen 642 AISNVKKVSLELGGESPFIIFADCDLNKAVQMGMSSVFFSKGENCIAA-GRLFVEDSIH-DEFVRRVVEEVRKMKVGNPL 719 (881)
T ss_pred hhcchheeeeeccCCCceEEEecCcHHHHHHhhccceeecCCcchhhh-cceeehhhhh-HHHHHHHHHHHHhhccCCcc
Confidence 4 8999999999999999999999999999999999988 99999 9999999999 7999999999998743
Q ss_pred ------------------------------EE-ecCccc--cc-cc-c-C-----CCCccccccccCceEEEEEeC--CH
Q 005047 573 ------------------------------GL-FGGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVD--DV 609 (716)
Q Consensus 573 ------------------------------~~-~g~~~~--~~-~~-p-v-----~~~~~~~eE~FGPVl~v~~~~--~~ 609 (716)
++ +||.+. .+ || | | ..|-+..||-||||++|.+|+ |+
T Consensus 720 dr~t~hgpqnh~ahl~kl~ey~~~~v~~ga~~~~gg~~~~r~g~~f~pti~s~i~d~~f~a~eesfgpim~is~f~d~d~ 799 (881)
T KOG2452|consen 720 DRDTDHGPQNHHAHLVKLMEYCQHGVKEGATLVCGGNQVPRPGFFFEPTVFTDVEDHMFIAKEESFGPVMIISRFADGDL 799 (881)
T ss_pred cccccCCchhHHHHHHHHHHHHHHHhccCcEEEECCccCCCCCcccCCeeecccchhhhhhhccccCceEEEEecCCCCH
Confidence 11 233322 12 33 3 3 246788999999999999996 68
Q ss_pred HHHHHHHHhcCCCceeEEEccCHHHHHHHHHccCcceEEEcCCcCCCCCCcccCcceeeccccccccccccchhcccEEE
Q 005047 610 RAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTR 689 (716)
Q Consensus 610 deAi~~aN~~~~GL~a~i~t~d~~~a~~~~~~~~~G~v~vN~~~~~~~~~p~g~g~~sG~~~~~~~~~g~~gl~~ft~~k 689 (716)
|+.++.+|+++|||+++|||+|...+.++++.+.+|+|+||.........||||.++||+| ...|...+.+|...|
T Consensus 800 ~~vl~ran~tefgla~gvftrd~~k~l~v~~~l~agtvfvnty~ktdvaapfggfkqsgfg----kd~ge~alneyl~~k 875 (881)
T KOG2452|consen 800 DAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFVNTYNKTDVAAPFGGFKQSGFG----KDLGEAALNEYLRVK 875 (881)
T ss_pred HHHHhhccccccccccceeecccchhhhhhhhhccceEEEeeccccccccCCCCccccccc----cchhHHHHhhheeeE
Confidence 9999999999999999999999999999999999999999998777788999999999987 245889999999999
Q ss_pred EEEEc
Q 005047 690 WILRG 694 (716)
Q Consensus 690 ~v~~~ 694 (716)
+|++.
T Consensus 876 tit~e 880 (881)
T KOG2452|consen 876 TVTFE 880 (881)
T ss_pred EEEee
Confidence 99874
No 130
>COG4230 Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion]
Probab=100.00 E-value=2.3e-55 Score=463.55 Aligned_cols=386 Identities=19% Similarity=0.225 Sum_probs=323.5
Q ss_pred chHHHHhcC-CcceeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Q 005047 265 DSIIKVLEG-KRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAA 343 (716)
Q Consensus 265 ~~l~~~~tg-~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~ 343 (716)
..+.+|.+. +.+|++..++ .+|+++|++.|.+|++.|+.+|+.+|+.+|++++++++.+..+|..++.+|-||
T Consensus 129 ~pV~nPad~~dvVG~V~ea~------~~~v~~A~~~A~~a~p~W~atp~~eRAaiL~raAdlme~~m~~L~~L~~REAGK 202 (769)
T COG4230 129 RPVINPADPDDIVGTVTEAT------EADVEQALEAAVAAAPIWSATPPAERAAILERAADLMEAQMPQLMGLLVREAGK 202 (769)
T ss_pred ccccCCCCHhHCeeeeeecC------HHHHHHHHHHHHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 444555553 4579999988 899999999999999999999999999999999999999999999988876554
Q ss_pred HHHhchhHHHHHHhhcCHHHHHHHHHHHHHHhcccc-cccccccccccCCCeEEEEeecceeEEEEEcCC-Cch-hHHHH
Q 005047 344 AQEAGYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQI 420 (716)
Q Consensus 344 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~-~P~-~~~~~ 420 (716)
+. +.+ ..|+++.++.++||+...+ +.| + ..+.|+|+|..|+|| ||+ +....
T Consensus 203 tl----~na--------IAEVREAVDFlrYYA~~ar~~~g----------~----~~~~~~G~vVcISPWNFPLAIFtGq 256 (769)
T COG4230 203 TL----SNA--------IAEVREAVDFLRYYAGQARDTFG----------N----LTHRPLGPVVCISPWNFPLAIFTGQ 256 (769)
T ss_pred ch----hhH--------HHHHHHHHHHHHHHHHHHhcccC----------c----cccCCCCcEEEECCCCchHHHHHhH
Confidence 32 222 4588999999999997543 111 1 346899999999999 786 44568
Q ss_pred HHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-CchHHHhhcCCCCccEEEeecCHHHHHHHH
Q 005047 421 ASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIK 498 (716)
Q Consensus 421 ~~~ALaaGNtvv~Kps~~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~ 498 (716)
++.||++||+|+-||+|+||+.+..-++++++ + +|++++|+++| ++++|+.|+.+++++.|.|||||+++|.|.
T Consensus 257 iaAAL~aGN~VlAKPAEqTpLIAa~aV~ll~e----AGvP~~~lqLLpG~G~tvGa~L~~darv~GV~FTGSTevA~li~ 332 (769)
T COG4230 257 IAAALAAGNSVLAKPAEQTPLIAAQAVRLLHE----AGVPPGVLQLLPGRGETVGAALTADARVAGVMFTGSTEVARLIQ 332 (769)
T ss_pred HHHHHHcCCccccCccccccHHHHHHHHHHHH----cCCChhhHHhcCCCCcccchhhhcCcccceEEEeCcHHHHHHHH
Confidence 99999999999999999999999999999997 8 99999999996 678999999999999999999999999997
Q ss_pred Hhc------CCCEEEecCCcceEEEcCCCCHHHHHHHHHHhcCCCCC-ccccccceEEEeCccCChhhHHHHHHHHHhcC
Q 005047 499 EST------KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMVETLLVHKDLACNGALNELVVELQHEG 571 (716)
Q Consensus 499 ~~a------~~~~~lElGGk~p~iV~~dADl~~Aa~~iv~~~f~n~g-~C~a~~~rv~V~~~i~dd~f~~~l~~~~~~~~ 571 (716)
++- ..|++.|.||.|+||||.+|--|+++..++.|+|..+| +|++. .-+|+++++. |..++.|+-+|.++.
T Consensus 333 ~~LA~r~g~~~pLIAETGGqNAMIVDSsAL~EQVv~Dvl~SAFdSAGQRCSAL-RvLclQ~DvA-d~~l~mLKGAm~el~ 410 (769)
T COG4230 333 RQLAKRQGRPIPLIAETGGQNAMIVDSSALAEQVVADVLASAFDSAGQRCSAL-RVLCLQEDVA-DRILTMLKGAMAELR 410 (769)
T ss_pred HHHhhcCCCCCceEeccCCcceEEeechhhHHHHHHHHHHHHhhcccchhhhh-hhhhhhhhHH-HHHHHHHHHHHHHhc
Confidence 653 27999999999999999999999999999999999876 99999 8889999999 799999999998874
Q ss_pred CE----E---ecC---c-----------------c-----------ccc-cc-c-C---CCCccccccccCceEEEEEeC
Q 005047 572 VG----L---FGG---P-----------------R-----------ASK-LL-Q-I---PETRLFHHEYNSMVCTVEIVD 607 (716)
Q Consensus 572 ~~----~---~g~---~-----------------~-----------~~~-~~-p-v---~~~~~~~eE~FGPVl~v~~~~ 607 (716)
+. + +|. . + ..+ |+ | + ..-..++.|+|||||.|++|+
T Consensus 411 ~G~p~~l~tDVGPVIdaEAk~~i~~Hi~~mr~~gr~v~q~~~~~~~q~GtFv~Ptl~El~~~~eL~rEVFGPVLHVvRy~ 490 (769)
T COG4230 411 VGNPDRLTTDVGPVIDAEAKANIEKHIQTMRSKGRLVHQAAAPNSLQKGTFVAPTLIELENLDELQREVFGPVLHVVRYK 490 (769)
T ss_pred cCCccceeccccccccHHHHHHHHHHHHHHHhcccchhhccCCCccCCceeeCceeEEcCCHHHHHHHhccceeEEEEec
Confidence 31 0 000 0 0 001 22 2 1 233568899999999999995
Q ss_pred --CHHHHHHHHHhcCCCceeEEEccCHHHHHHHHHccCcceEEEcCCcCC--CCCCcccCcceeeccccccccccccchh
Q 005047 608 --DVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRF--CDGARFGLGAEVGISTSRIHARGPVGVE 683 (716)
Q Consensus 608 --~~deAi~~aN~~~~GL~a~i~t~d~~~a~~~~~~~~~G~v~vN~~~~~--~~~~p~g~g~~sG~~~~~~~~~g~~gl~ 683 (716)
++|+.|+.+|.++|||+.+|||+-.+.+.++.+++++|++|||..... ....||||-+-||.| .+.+|+.++.
T Consensus 491 ~~~l~~vi~~INatGyGLT~GvHtRideti~~v~~~~~aGNlYVNRN~vGAVVGVQPFGG~GLSGTG---PKAGGp~YL~ 567 (769)
T COG4230 491 RDELDEVIDQINATGYGLTLGVHTRIDETIAHVTERAHAGNLYVNRNIVGAVVGVQPFGGEGLSGTG---PKAGGPLYLL 567 (769)
T ss_pred HHHHHHHHHHHhccCcceeeeeecchHHHHHHHHhhccccceEeeccceeeEEeeccCCCCCCCCCC---CCCCChHHHH
Confidence 899999999999999999999999999999999999999999986543 355799987666554 4678999999
Q ss_pred cccEEEEE
Q 005047 684 GLLTTRWI 691 (716)
Q Consensus 684 ~ft~~k~v 691 (716)
.|+..+..
T Consensus 568 Rl~~~~p~ 575 (769)
T COG4230 568 RLVSERPW 575 (769)
T ss_pred HHHhcCCc
Confidence 99877653
No 131
>KOG4165 consensus Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism]
Probab=100.00 E-value=5.6e-50 Score=399.32 Aligned_cols=422 Identities=63% Similarity=0.969 Sum_probs=389.9
Q ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhchhHHHHHHhhcCHHHHHHHHHHHH
Q 005047 293 AREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIR 372 (716)
Q Consensus 293 v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 372 (716)
+++..+.||+|++..++++.++|.++|.+++++|+.+..+|.+++.+|+..+++.|+.++++.|+..+...+..+...++
T Consensus 2 ~e~~a~~aR~a~r~LqaLs~e~R~~il~~iad~L~~~~~~I~~aN~~Dla~Ake~GL~~sll~RL~l~~~K~~sl~~g~~ 81 (433)
T KOG4165|consen 2 VEEMAENAREAGRILQALSNEDRADILHHIADLLVDNEKEILAANKKDLAEAKEAGLAESLLKRLDLSPGKISSLAAGLR 81 (433)
T ss_pred HHHHHHHHHHHhhHHHhcChhhHHHHHHHHHHHHHhhHHHHHhcchhhHHHHHhcCccHHHHHHhcCChHHHHHHHHHHH
Confidence 35567789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcccccccccccccccCCCeEEEEeecceeEEEEEcCCCchhHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHH
Q 005047 373 ILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITS 452 (716)
Q Consensus 373 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~~P~~~~~~~~~ALaaGNtvv~Kps~~tp~t~~~l~~l~~~ 452 (716)
..+.+++++|+.+.......+...+.+..|+||.++|+...|.......+.|+++||.+++|....+..+...|.+++++
T Consensus 82 ~ia~~edpvGRVl~~~~ladgL~L~qvt~PiGvLLVIFESRPd~l~qiasLAi~SgN~llLKGGkEa~~Sn~~L~~~v~~ 161 (433)
T KOG4165|consen 82 QIAELEDPVGRVLKKTRLADGLELEQVTVPIGVLLVIFESRPDCLPQIASLAIASGNGLLLKGGKEAAHSNAALHKLVQE 161 (433)
T ss_pred HHHhcccchhhheeeeeccCCceEEEeeccceEEEEEeccCchHHHHHHHHHHhcCCeEeecCchhhhhhHHHHHHHHHH
Confidence 99999999998765444457788888999999999999999987777778899999999999999999999999999999
Q ss_pred hcccc-cCcCceEEecCCchHHHhhcCCCCccEEEeecCHHHHHHHHHhcCCCEEEecCCcceEEEcCCCCHHHHHHHHH
Q 005047 453 AIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVI 531 (716)
Q Consensus 453 al~~a-lP~gvv~vv~~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a~~~~~lElGGk~p~iV~~dADl~~Aa~~iv 531 (716)
|+.+. .|.+.+|+|+..+++.++|..+..||+|...||+...|.|...+.+||+-.--|-+.+||++|||+++|.+.+.
T Consensus 162 al~~~~~~~~aV~LV~sREev~dLl~ld~~IDLvIPRGSs~LVr~Ik~~tkIPVLGHA~GichvYvd~dad~~kA~riv~ 241 (433)
T KOG4165|consen 162 ALGTHGGPGKAVQLVTSREEVSDLLKLDDYIDLVIPRGSSDLVRSIKDTTKIPVLGHAEGICHVYVDKDADLDKAKRIVR 241 (433)
T ss_pred HhhhccCchhhhhheecHHHHHHHhhhhhheeEEecCCcHHHHHHHhhcccCcccccccceeEEEeccccCHHHHHHHHh
Confidence 99888 89999999999999999999999999999999999999998888899999999999999999999999999999
Q ss_pred HhcCCCCCccccccceEEEeCccCChhhHHHHHHHHHhcCCEEecCccccccccC--CCCccccccccCceEEEEEeCCH
Q 005047 532 DAKIDYPAACNAMVETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLQI--PETRLFHHEYNSMVCTVEIVDDV 609 (716)
Q Consensus 532 ~~~f~n~g~C~a~~~rv~V~~~i~dd~f~~~l~~~~~~~~~~~~g~~~~~~~~pv--~~~~~~~eE~FGPVl~v~~~~~~ 609 (716)
.++..+.-.|++. +.++||++.....|.+.+...++..|+++.++++...+..+ |...-|+.|+-.-.++|-.+++.
T Consensus 242 DaK~dYPAaCNAm-ETLLIh~dl~~~~~~~~l~~~l~~~gVtl~agpkl~~~l~~~p~e~~s~~~Ey~~l~~~ievV~~v 320 (433)
T KOG4165|consen 242 DAKCDYPAACNAM-ETLLIHKDLEQSPFFDDLINMLKEEGVTLHAGPKLAALLKFSPPEAKSFNTEYGSLECTIEVVDSV 320 (433)
T ss_pred cccCCCchhhhhH-HHHhccHhhhhcchHHHHHHHHHhcCeEEecChhHHhhcCcCCchhhhhhhhhcchheeeeecccH
Confidence 9999888899999 99999998432589999999999999999988865443223 34567889998889999999999
Q ss_pred HHHHHHHHhcCCCceeEEEccCHHHHHHHHHccCcceEEEcCCcCCCCCCcccCcceeeccccccccccccchhcccEEE
Q 005047 610 RAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTR 689 (716)
Q Consensus 610 deAi~~aN~~~~GL~a~i~t~d~~~a~~~~~~~~~G~v~vN~~~~~~~~~p~g~g~~sG~~~~~~~~~g~~gl~~ft~~k 689 (716)
++||+.+|.++.+|+-+|.|+|.+.|++|.+.+++.+|++|.+++|.+++.||.|.+.|+|+++.|.+||.|++.++.+|
T Consensus 321 ~~Ai~HI~~hgS~HTD~IvTe~~~~Ae~Fl~~VDSa~vf~NASTRFaDGfRfGlGaEVGIST~rIHARGPvGveGLlttk 400 (433)
T KOG4165|consen 321 QSAIDHIHTHGSSHTDCIVTENEATAEHFLKHVDSACVFHNASTRFADGFRFGLGAEVGISTSRIHARGPVGVEGLLTTK 400 (433)
T ss_pred HHHHHHHHhcCCcccceEEecCHHHHHHHHhccchhheeecccccccccccccccceeeeeccceeccCCccccceeeee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCceeee---CCCCceeeeccccCC
Q 005047 690 WILRGNGHVVD---GDQGVVYTHKNLALQ 715 (716)
Q Consensus 690 ~v~~~~~~~~~---~~~~~~~~~~~~~~~ 715 (716)
|+..+.+|+.. .+++.+|+|+++|++
T Consensus 401 w~lRG~gqvvsd~~~~G~~~y~H~~l~i~ 429 (433)
T KOG4165|consen 401 WLLRGKGQVVSDFNEGGKRAYLHEDLPID 429 (433)
T ss_pred eEEecCCceeccccCCCceeeeecCCChh
Confidence 99999999873 577999999999986
No 132
>KOG2453 consensus Aldehyde dehydrogenase [Energy production and conversion]
Probab=100.00 E-value=5.8e-51 Score=406.21 Aligned_cols=409 Identities=16% Similarity=0.189 Sum_probs=334.9
Q ss_pred HhcCCcceeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhch
Q 005047 270 VLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGY 349 (716)
Q Consensus 270 ~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~d~~~~~~~g~ 349 (716)
|.+++.+..+..++ -+|.+.++..|++|++.|...|...|.++.+++.|.|++..+-|.++...|+++-...|
T Consensus 40 pann~pia~v~~as------v~dye~~~k~a~ea~kiw~~vpapkrgeivrqigdalr~klq~lg~lvslemgkilaeg- 112 (507)
T KOG2453|consen 40 PANNSPIANVQNAS------VQDYEIAIKEAKEAYKIWCEVPAPKRGEIVRQIGDALRTKLQNLGKLVSLEMGKILAEG- 112 (507)
T ss_pred CCCCChhHHHhhcc------HHHHHHHHHHHHHHHHHHhcCCCCccchHHHHHHHHHHHHHHHHhhhhhhhhhhHhhhc-
Confidence 45566667666666 77899999999999999999999999999999999999999999999888776543322
Q ss_pred hHHHHHHhhcCHHHHHHHHHHHHHHhcccccc-cccccccccCCCeEEEEeecceeEEEEEcCC-Cch-hHHHHHHHHHH
Q 005047 350 AKSLVSRLALKPGKISSLAKSIRILADMEEPI-GQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIR 426 (716)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~-~P~-~~~~~~~~ALa 426 (716)
..|++..++.+.+..++.+.. |...|+. .++......+.|+|+|++|+.+ ||. .--|.-+.||.
T Consensus 113 -----------vgevqeyvdicdyavglsr~l~g~i~pse--rpghalleqwnplg~vgvitafnfpcavygwnnaiaMv 179 (507)
T KOG2453|consen 113 -----------VGEVQEYVDICDYAVGLSRSLEGKIFPSE--RPGHALLEQWNPLGVVGVITAFNFPCAVYGWNNAIAMV 179 (507)
T ss_pred -----------chhHHHHHHHHHHhhhhhhhhCCcccCCC--CCchhHHHhcCCcceEEEEEeccCCceeeccCchhhhh
Confidence 356777778787766666544 4444432 2344456678999999999986 784 45577677999
Q ss_pred hCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecCCchHHHhhcCCCCccEEEeecCHHHHHHHHHhc---C
Q 005047 427 SGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST---K 502 (716)
Q Consensus 427 aGNtvv~Kps~~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a---~ 502 (716)
+||+|++||++.||+|+....+++.+.|.+. +|++......|..+.+..+..+.+++.++||||+++||.+.+.- .
T Consensus 180 ~gncVvWKpApttpLtTiAvtklIaevL~qnnl~~aicsltcG~aDigrAaakdgRvnlvsftGssQvgKsvgq~vqarf 259 (507)
T KOG2453|consen 180 CGNCVVWKPAPTTPLTTIAVTKLIAEVLEQNNLPGAICSLTCGGADIGRAAAKDGRVNLVSFTGSSQVGKSVGQQVQARF 259 (507)
T ss_pred hcceeEecCCCCcceeHHHHHHHHHHHHhccCCCcceeeecccchhhhhhccccCceeecccccchhhhhHHHHHHHHHh
Confidence 9999999999999999999999999999888 99998888888888999999999999999999999999997654 3
Q ss_pred CCEEEecCCcceEEEcCCCCHHHHHHHHHHhcCCCCC-ccccccceEEEeCccCChhhHHHHHHHHHhcCCE-------E
Q 005047 503 IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMVETLLVHKDLACNGALNELVVELQHEGVG-------L 574 (716)
Q Consensus 503 ~~~~lElGGk~p~iV~~dADl~~Aa~~iv~~~f~n~g-~C~a~~~rv~V~~~i~dd~f~~~l~~~~~~~~~~-------~ 574 (716)
-+.+|||||||+.||++||||..++...++++...+| +|+.. .|++||+++| |+.+++|.+..++..+. +
T Consensus 260 gk~llelggnnaiiv~edadl~lvvps~lfaavgtagqrctt~-rrl~~hesvy-d~vlerlkkayaq~~ignpld~ntl 337 (507)
T KOG2453|consen 260 GKLLLELGGNNAIIVNEDADLNLVVPSTLFAAVGTAGQRCTTT-RRLIVHESVY-DQVLERLKKAYAQFEIGNPLDSNTL 337 (507)
T ss_pred hhHHHhhcCCceEEEeccccceeeehHHHHHHhcccccchhhh-hHHHhhHHHH-HHHHHHHHHHHHheecCCcCCCCce
Confidence 6889999999999999999999999999999998876 99999 9999999999 79999999888765321 1
Q ss_pred ----------------------------ecCc---cccccc-c-C----CCCccccccccCceEEEEEeCCHHHHHHHHH
Q 005047 575 ----------------------------FGGP---RASKLL-Q-I----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIH 617 (716)
Q Consensus 575 ----------------------------~g~~---~~~~~~-p-v----~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN 617 (716)
+|+. +...|+ | | .+.++..+|.|.|||.|.+|++++|||++-|
T Consensus 338 ~gplht~qav~~f~~~veeak~~ggki~yggkv~er~gnfveptivtl~hda~vv~~etfapilyvlkf~~~eea~ainn 417 (507)
T KOG2453|consen 338 IGPLHTQQAVGKFKASVEEAKASGGKIEYGGKVLERDGNFVEPTIVTLKHDAPVVLRETFAPILYVLKFSTLEEAIAINN 417 (507)
T ss_pred eccccCHHHHHHHHHHHHHHHhcCCeEEECCEeeccCCCcccceEEEecCCcchhhhhhccceeeEEeccchhhhheecc
Confidence 1221 111122 4 2 3578999999999999999999999999999
Q ss_pred hcCCCceeEEEccCHHHHHHHHH--ccCcceEEEcCCcCCC-CCCcccCcceeeccccccccccccchhcccEEEEEEEc
Q 005047 618 QHGSAHTDCIVAEDQKVAETFLC--QVDSAAVFHNASTRFC-DGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRG 694 (716)
Q Consensus 618 ~~~~GL~a~i~t~d~~~a~~~~~--~~~~G~v~vN~~~~~~-~~~p~g~g~~sG~~~~~~~~~g~~gl~~ft~~k~v~~~ 694 (716)
..+.||+++|||+|..++.|..- .-++|.|.||.++... -+..|||-++.|- +++.|.++-++|++..+-+++
T Consensus 418 ev~qglsssift~n~~nifrw~gpkgsdcgivnvniptsgaeiggafggek~tgg----gresgsdswkqymrrstctin 493 (507)
T KOG2453|consen 418 EVDQGLSSSIFTTNIQNIFRWMGPKGSDCGIVNVNIPTSGAEIGGAFGGEKETGG----GRESGSDSWKQYMRRSTCTIN 493 (507)
T ss_pred ccccccchhhhhcCHHHHHhhhCCCCCccceEEecCCCCchhhcccccCccccCC----CcccCchHHHHHHhhceeeee
Confidence 99999999999999999999865 6899999999987542 3456777665543 356688899999998887887
Q ss_pred CceeeeCCCC
Q 005047 695 NGHVVDGDQG 704 (716)
Q Consensus 695 ~~~~~~~~~~ 704 (716)
.+..-|--|+
T Consensus 494 yskelplaqg 503 (507)
T KOG2453|consen 494 YSKELPLAQG 503 (507)
T ss_pred ccccCchhhc
Confidence 7654444333
No 133
>KOG2455 consensus Delta-1-pyrroline-5-carboxylate dehydrogenase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.2e-45 Score=380.47 Aligned_cols=387 Identities=17% Similarity=0.191 Sum_probs=298.7
Q ss_pred ceeEEecCCccccchhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH-hCHHHHHHHHHHHHHHHHHhchhHHHH
Q 005047 276 VGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALE-ANESLIKVENEADVAAAQEAGYAKSLV 354 (716)
Q Consensus 276 iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~-~~~~el~~~~~~d~~~~~~~g~~~~~~ 354 (716)
+..+..++ ..+|++||++|.+|++.|..+|..+|.+|++|.|+++. +.+-+|-.... ++.+|. .-++..
T Consensus 87 lA~~~yA~------~k~ie~AIkaAl~a~~~W~~~PiadR~aI~lkAAdlistkyr~~l~aatM--lgqgKt--~~qAei 156 (561)
T KOG2455|consen 87 LAKVYYAT------KKQIEKAIKAALSAQKTWELVPIADRLAIFLKAADLISTKYRYDLLAATM--LGQGKT--AIQAEI 156 (561)
T ss_pred hhheeecc------HHHHHHHHHHHHhhcCccccCcHHHHHHHHHHHHHHhcchHHHHHHHHHH--hcCCcc--hHHHHH
Confidence 45555666 88999999999999999999999999999999999999 66666654432 233332 112211
Q ss_pred HHhhcCHHHHHHHHHHHHHHhcccc-cccccccccccCCCeEEEEeecce-eEEEEEcCCCc-hhHH-HHHHHHHHhCCE
Q 005047 355 SRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPL-GVLLIVFESRP-DALV-QIASLAIRSGNG 430 (716)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~Pl-GVv~~I~p~~P-~~~~-~~~~~ALaaGNt 430 (716)
.-..++++.+|..+.-+. ..... |. ....+.+....++|+ |-|++|+||+- .+.. ...+|||+ ||+
T Consensus 157 -------Da~~eLidf~R~na~ya~eL~~~q-pi-~~~~~t~ns~~yRpleGFVaAisPFnftAI~gnLa~aPaLM-GN~ 226 (561)
T KOG2455|consen 157 -------DAAAELIDFFRFNAKYASELYAQQ-PI-SQTKGTWNSMEYRPLEGFVAAISPFNFTAIGGNLAGAPALM-GNV 226 (561)
T ss_pred -------HHHHHHHHHHHHhHHHHHHhhhcC-Cc-cccCCCCcceeeccccceeEEecccceeeeccccccChhhh-cce
Confidence 123344444554332111 11111 11 112344555678898 99999999864 3433 34566765 999
Q ss_pred EEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEec-CCchHHHhhcCCCCccEEEeecCHHHHHHHHHhc-------
Q 005047 431 LLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVT-SREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST------- 501 (716)
Q Consensus 431 vv~Kps~~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~-~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a------- 501 (716)
|++|||-.+.++++++-++++| | +|+|++|.|+ ++...++.+..+|.+.++.||||+.+-|.+..+-
T Consensus 227 VLwkPS~ta~lssYii~~il~E----AGlP~GvinFvPad~~~f~dtita~~hfaglnftgS~~~fk~lwk~V~~n~~~Y 302 (561)
T KOG2455|consen 227 VLWKPSDTAALSSYIIYRILRE----AGLPPGVINFVPADGPLFGDTITASPHFAGLNFTGSVPTFKHLWKKVGENVDNY 302 (561)
T ss_pred eeecccchhHHHHHHHHHHHHH----cCCCccceeeccCCCCeecceeccCcccceeeeecccHHHHHHHHHHHhhhhhh
Confidence 9999999999999999999997 8 9999999999 4778899999999999999999999998886653
Q ss_pred --CCCEEEecCCcceEEEcCCCCHHHHHHHHHHhcCCCCC-ccccccceEEEeCccCChhhHHHHHHHHHhcCCE-----
Q 005047 502 --KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMVETLLVHKDLACNGALNELVVELQHEGVG----- 573 (716)
Q Consensus 502 --~~~~~lElGGk~p~iV~~dADl~~Aa~~iv~~~f~n~g-~C~a~~~rv~V~~~i~dd~f~~~l~~~~~~~~~~----- 573 (716)
--+++.|.||||--+|+++||++.++...++|+|..+| .|+|. +|+||++++. +.+.++|++.-.++.+.
T Consensus 303 ~~fPrlvgEcgGkNFHfVH~SA~VesvV~~TvrsAfey~GQkcsA~-SRmYvp~s~w-p~i~e~l~~~~~q~~igd~~~d 380 (561)
T KOG2455|consen 303 RTFPRLVGECGGKNFHFVHASADVESVVSSTVRSAFEYQGQKCSAC-SRMYVPESLW-PQIREELVEEHSQLKIGDPVID 380 (561)
T ss_pred hcchhhhccCCCcceEEeccccchHHHHHHHHHHHHhhcccccchh-hhcccchhhc-HHHHHHHHHHHhhcccCCcccc
Confidence 25799999999999999999999999999999998876 99999 9999999999 89989998877765321
Q ss_pred --------------------------------EecCcc--ccccc--c-C-----CCCccccccccCceEEEEEeC--CH
Q 005047 574 --------------------------------LFGGPR--ASKLL--Q-I-----PETRLFHHEYNSMVCTVEIVD--DV 609 (716)
Q Consensus 574 --------------------------------~~g~~~--~~~~~--p-v-----~~~~~~~eE~FGPVl~v~~~~--~~ 609 (716)
+.||.- ..++| | | |.+++|.||+|||||+|+-|+ ++
T Consensus 381 ~~~f~gavIh~~sF~rl~k~le~ak~~~~leiL~GGk~DdS~G~FV~PTiv~~kdP~~pim~ee~fGPvLsVyvY~Dd~~ 460 (561)
T KOG2455|consen 381 FSTFIGAVIHDKSFARLKKVLEHAKKDPELEILAGGKCDDSTGYFVEPTIVLSKDPKDPIMTEEIFGPVLSVYVYEDDKF 460 (561)
T ss_pred ccchhhhhccHHHHHHHHHHHHhhccCccceeeecCcccCCCCeeecceEEEccCCCcchhhhhccCceeEEEEeccccH
Confidence 123321 12344 6 2 568999999999999999996 58
Q ss_pred HHHHHHH-HhcCCCceeEEEccCHHHHHHHHH--ccCcceEEEcCCcCC--CCCCcccCcceeeccccccccccccchhc
Q 005047 610 RAAIDHI-HQHGSAHTDCIVAEDQKVAETFLC--QVDSAAVFHNASTRF--CDGARFGLGAEVGISTSRIHARGPVGVEG 684 (716)
Q Consensus 610 deAi~~a-N~~~~GL~a~i~t~d~~~a~~~~~--~~~~G~v~vN~~~~~--~~~~p~g~g~~sG~~~~~~~~~g~~gl~~ 684 (716)
+|+++++ |.++|||+.+||++|.+..++..+ +..+|+.|||+-++. ....||||.+.||... ..+|++.+..
T Consensus 461 ~E~l~lv~~tt~YaLTGaiFaqd~~vv~~a~~~Lr~aAgNfYiNdKcTGsvvgqqpFGGaR~SGTND---KaGgp~~l~R 537 (561)
T KOG2455|consen 461 DEVLKLVDNTTPYALTGAIFAQDREVVLHALDVLRMAAGNFYINDKCTGSVVGQQPFGGARLSGTND---KAGGPHYLLR 537 (561)
T ss_pred HHHHHHHhcCCcceeccccccccHHHHHHHHHHHHhhhcceEEccccccceeeccccCcccccCCCC---CCCCceEEEe
Confidence 9999998 778999999999999999988877 567899999985443 3668999999998742 3568888888
Q ss_pred ccEEEEE
Q 005047 685 LLTTRWI 691 (716)
Q Consensus 685 ft~~k~v 691 (716)
|+..++|
T Consensus 538 wtSp~~i 544 (561)
T KOG2455|consen 538 WTSPLSI 544 (561)
T ss_pred ecCcchh
Confidence 8777665
No 134
>COG0263 ProB Glutamate 5-kinase [Amino acid transport and metabolism]
Probab=100.00 E-value=8.2e-41 Score=342.58 Aligned_cols=255 Identities=42% Similarity=0.671 Sum_probs=231.4
Q ss_pred hcccCeEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhcccCCcccccccccch
Q 005047 11 VKDVKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNEL 90 (716)
Q Consensus 11 ~~~~~~iVIKiGGs~l~~~~~~~~~~~~~~~a~~I~~l~~~G~~vvIVhGGg~~i~~~~~~~~~~~~~~~~~~~~~~~~l 90 (716)
+++.+++|||||.|+|+++++.++..++..++++|+.|++.|+++|||.+|+...|...++... ++..+.
T Consensus 3 ~~~~~riVvKiGSs~Lt~~~g~l~~~~l~~l~~~ia~L~~~G~eVilVSSGAiaaG~~~Lg~~~----rp~~l~------ 72 (369)
T COG0263 3 LSSARRIVVKIGSSSLTDGTGGLDRSKLEELVRQVAALHKAGHEVVLVSSGAIAAGRTRLGLPK----RPKTLA------ 72 (369)
T ss_pred CCcceEEEEEECcceeeCCCCCcCHHHHHHHHHHHHHHHhCCCEEEEEccchhhhChhhcCCCC----CCcchH------
Confidence 5778999999999999998888999999999999999999999999999999999987665322 233333
Q ss_pred hHHHHHHhchHHHHHHHHHHhccCCCccceEEecCccCCchhhHhHHHHHHHHHHhCCCeEEeeCCCceecCCCCCCCCC
Q 005047 91 DGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSS 170 (716)
Q Consensus 91 ~~~~~~a~g~~~~~~~~~~~l~~~gi~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~g~iPV~~g~d~v~~~~~~~~~~g 170 (716)
.+|+++++||..++..|+..|..+|+.+.|+++|..||.++.+|.|...++..||+.|.|||+++||.++. ++
T Consensus 73 ~kQA~AAVGQ~~Lm~~y~~~f~~~g~~v~QiLLTr~D~~~r~ry~Nar~Tl~~Ll~~gvVPIINENDtva~-------~E 145 (369)
T COG0263 73 EKQAAAAVGQVRLMQLYEELFARYGIKVGQILLTRDDFSDRRRYLNARNTLSALLELGVVPIINENDTVAT-------EE 145 (369)
T ss_pred HHHHHHHhCHHHHHHHHHHHHHhcCCeeeEEEeehhhhhhHHHHHHHHHHHHHHHHCCceeeecCCCceee-------ee
Confidence 35699999999999999999999999999999999999999999999999999999999999999999998 56
Q ss_pred ceeecchHHHHHHHhhcCCCEEEEeecCCccccCCC-cccccccccccch--hchHHHHhcCCCCCcccCCcHHHHHHHH
Q 005047 171 GIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPP-SEPNSKLIHTYIR--AKHQAEITFGDKSRVGRGGMTAKVNAAY 247 (716)
Q Consensus 171 ~~~~~sD~~A~~lA~~L~Ad~Li~~TDVdGVy~~dP-~~p~a~~i~~is~--~e~~~~~~~g~~~~~~~ggM~~Kl~aa~ 247 (716)
..|+++|++++.+|..++||.|+++||+||+|++|| ++|+|++|++++. .|++ .+..++.+..+||||..|++||.
T Consensus 146 ikfGDND~LsA~VA~lv~ADlLvlLsDiDGLyd~nPr~~pdAk~i~~V~~it~ei~-~~aggsgs~~GTGGM~TKl~AA~ 224 (369)
T COG0263 146 IKFGDNDTLSALVAILVGADLLVLLSDIDGLYDANPRTNPDAKLIPEVEEITPEIE-AMAGGSGSELGTGGMRTKLEAAK 224 (369)
T ss_pred eeecCCchHHHHHHHHhCCCEEEEEEccCcccCCCCCCCCCCeeehhhcccCHHHH-HHhcCCCCCCCcccHHHHHHHHH
Confidence 688999999999999999999999999999999999 6999999999974 2343 34556778899999999999999
Q ss_pred HHHHcCCcEEEeeCCCcchHHHHhcCCcceeEEecC
Q 005047 248 CAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRD 283 (716)
Q Consensus 248 ~a~~~gi~v~I~~g~~~~~l~~~~tg~~iGT~i~~~ 283 (716)
.|.+.|++++|++|..|+.+.+++.++..||++.+.
T Consensus 225 iA~~aG~~~iI~~g~~~~~i~~~~~~~~~GT~F~~~ 260 (369)
T COG0263 225 IATRAGVPVIIASGSKPDVILDALEGEAVGTLFEPQ 260 (369)
T ss_pred HHHHcCCcEEEecCCCcchHHHHHhCCCCccEEecC
Confidence 999999999999999999999999999999999977
No 135
>cd04256 AAK_P5CS_ProBA AAK_P5CS_ProBA: Glutamate-5-kinase (G5K) domain of the bifunctional delta 1-pyrroline-5-carboxylate synthetase (P5CS), composed of an N-terminal G5K (ProB) and a C-terminal glutamyl 5- phosphate reductase (G5PR, ProA), the first and second enzyme catalyzing proline (and, in mammals, ornithine) biosynthesis. G5K transfers the terminal phosphoryl group of ATP to the gamma-carboxyl group of glutamate, and is subject to feedback allosteric inhibition by proline or ornithine. In plants, proline plays an important role as an osmoprotectant and, in mammals, ornithine biosynthesis is crucial for proper ammonia detoxification, since a G5K mutation has been shown to cause human hyperammonaemia.
Probab=100.00 E-value=9.8e-41 Score=348.13 Aligned_cols=271 Identities=57% Similarity=0.815 Sum_probs=228.4
Q ss_pred HhhcccCeEEEEeCCcccccCCC-cccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhcc-------cCCc
Q 005047 9 AFVKDVKRLVVKVGTAVVTRSDG-RLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLV-------NSSL 80 (716)
Q Consensus 9 ~~~~~~~~iVIKiGGs~l~~~~~-~~~~~~~~~~a~~I~~l~~~G~~vvIVhGGg~~i~~~~~~~~~~~-------~~~~ 80 (716)
+-++..+++|||+|||+|+++++ .++.+.+..++++|+.|++.|+++|||.||+.++|+..++.+... ..+.
T Consensus 3 ~~~~~~~~iVvKiGss~lt~~~~~~~~~~~l~~l~~~i~~l~~~g~~vilVssGAv~~G~~~l~~~~~~~~~~~~~~~g~ 82 (284)
T cd04256 3 SELKHAKRIVVKLGSAVVTREDECGLALGRLASIVEQVSELQSQGREVILVTSGAVAFGKQRLRHEILLSSSMRQTLKSG 82 (284)
T ss_pred hhhccCCEEEEEeCchhccCCCCCccCHHHHHHHHHHHHHHHHCCCEEEEEeeCcHHhChHHhhhccccccchhhhcccc
Confidence 33566799999999999999876 799999999999999999999999999999999999887654310 0111
Q ss_pred ccccccccchhHHHHHHhchHHHHHHHHHHhccCCCccceEEecCccCCchhhHhHHHHHHHHHHhCCCeEEeeCCCcee
Q 005047 81 ADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVS 160 (716)
Q Consensus 81 ~~~~~~~~~l~~~~~~a~g~~~~~~~~~~~l~~~gi~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~g~iPV~~g~d~v~ 160 (716)
..++.....+++++++++||..++.+|+..|..+++++.|+++|.+||.++..+.+..+.|+.||+.|+|||+++||++.
T Consensus 83 ~~~~~~~~~~~~qa~aa~gq~~L~~~y~~~f~~~~~~~~q~llt~~d~~~~~~~~~~~~~l~~lL~~g~iPVi~~nD~v~ 162 (284)
T cd04256 83 QLKDMPQMELDGRACAAVGQSGLMALYEAMFTQYGITVAQVLVTKPDFYDEQTRRNLNGTLEELLRLNIIPIINTNDAVS 162 (284)
T ss_pred cccCCcchhHHHHHHHHcccHHHHHHHHHHHHHcCCcHHHeeeeccccccHHHHHHHHHHHHHHHHCCCEEEEeCCCccc
Confidence 11222233456789999999999999999999999999999999999998888888889999999999999999999988
Q ss_pred cCCCCCC-CCC-ceeecchHHHHHHHhhcCCCEEEEeecCCccccCCCcccccccccccchhchHHHHhcCCCCCcccCC
Q 005047 161 TRKAPYE-DSS-GIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGG 238 (716)
Q Consensus 161 ~~~~~~~-~~g-~~~~~sD~~A~~lA~~L~Ad~Li~~TDVdGVy~~dP~~p~a~~i~~is~~e~~~~~~~g~~~~~~~gg 238 (716)
+...... ..+ ..++|+|++|+++|.+++||+|+|+|||||||++||++|++++|++++..+..+. ..+..+.+++||
T Consensus 163 ~~~~~~~~~~~~~~i~d~D~lAa~lA~~l~Ad~Li~lTDVdGVy~~dP~~~~a~~I~~i~~~~~~~~-~~~~~s~~gtGG 241 (284)
T cd04256 163 PPPEPDEDLQGVISIKDNDSLAARLAVELKADLLILLSDVDGLYDGPPGSDDAKLIHTFYPGDQQSI-TFGTKSRVGTGG 241 (284)
T ss_pred ccccccccccccccccChHHHHHHHHHHcCCCEEEEEeCCCeeecCCCCCCCCeEcccccHhHHHHh-hcccccCcccCC
Confidence 6321111 011 1358999999999999999999999999999999998899999999998776543 233445678999
Q ss_pred cHHHHHHHHHHHHcCCcEEEeeCCCcchHHHHhcCCcceeEE
Q 005047 239 MTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLF 280 (716)
Q Consensus 239 M~~Kl~aa~~a~~~gi~v~I~~g~~~~~l~~~~tg~~iGT~i 280 (716)
|.+||++|..+.++|++++|+||..|+.+.+++.|+..||++
T Consensus 242 M~~Kl~Aa~~a~~~Gi~v~I~~G~~~~~i~~~l~G~~~GT~~ 283 (284)
T cd04256 242 MEAKVKAALWALQGGTSVVITNGMAGDVITKILEGKKVGTFF 283 (284)
T ss_pred cHHHHHHHHHHHHCCCeEEEEcCCCccHHHHHHcCCCCCEEe
Confidence 999999999999999999999999999999999999899986
No 136
>KOG1154 consensus Gamma-glutamyl kinase [Amino acid transport and metabolism]
Probab=100.00 E-value=4e-40 Score=315.90 Aligned_cols=273 Identities=57% Similarity=0.840 Sum_probs=239.3
Q ss_pred hHHhhcccCeEEEEeCCcccccCCC-cccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhcccCCcccccc
Q 005047 7 SRAFVKDVKRLVVKVGTAVVTRSDG-RLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQK 85 (716)
Q Consensus 7 ~~~~~~~~~~iVIKiGGs~l~~~~~-~~~~~~~~~~a~~I~~l~~~G~~vvIVhGGg~~i~~~~~~~~~~~~~~~~~~~~ 85 (716)
.|+++|+.++||||+|.+++++++. .+-..++..+++++..|++.|++++||.+|+..+|+..++.......++++.-.
T Consensus 2 ~r~~~kka~rIVVKLGSavit~e~~~~laLgrla~IVEqV~~L~~~G~evilVSSGaVA~G~qrLr~~~~~s~s~r~~l~ 81 (285)
T KOG1154|consen 2 KRAFLKKAYRIVVKLGSAVITREDTCGLALGRLASIVEQVSELQRMGREVILVSSGAVAFGRQRLRQELLPSSSMRQTLK 81 (285)
T ss_pred cchhhccceEEEEEecceEEECCCCccchHHHHHHHHHHHHHHHhcCceEEEEecchhhhhHHHhhhhhccchhHHHhhC
Confidence 4778899999999999999999876 477778999999999999999999999999999999887766555444554322
Q ss_pred cccc-hhHHHHHHhchHHHHHHHHHHhccCCCccceEEecCccCCchhhHhHHHHHHHHHHhCCCeEEeeCCCceecCCC
Q 005047 86 PQNE-LDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKA 164 (716)
Q Consensus 86 ~~~~-l~~~~~~a~g~~~~~~~~~~~l~~~gi~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~g~iPV~~g~d~v~~~~~ 164 (716)
.++. +.+++++++||.+++.+|+..|.++++.++|+++|+.||.+...|.+...+|.+||..|+|||++.||++.+..+
T Consensus 82 ~~~~l~e~rA~AAvGQ~~Lmalye~lF~Qy~~~iAQvLvT~~Di~d~~~r~Nl~~Ti~eLL~m~viPIvNeNDavs~~~~ 161 (285)
T KOG1154|consen 82 PQSELAEKRACAAVGQSGLMALYETLFTQYGITIAQVLVTRNDILDEQQRKNLQNTISELLSMNVIPIVNENDAVSPREI 161 (285)
T ss_pred CccchhhHHHHHHhCcchHHHHHHHHHHHhccchheeeecCcchhhHHHHHHHHHHHHHHHhCCceeeecCCCccCCccc
Confidence 2223 345799999999999999999999999999999999999998889888899999999999999999999998544
Q ss_pred CCCCCCceeecchHHHHHHHhhcCCCEEEEeecCCccccCCCcccccccccccchhchHHHHhcCCCCCcccCCcHHHHH
Q 005047 165 PYEDSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVN 244 (716)
Q Consensus 165 ~~~~~g~~~~~sD~~A~~lA~~L~Ad~Li~~TDVdGVy~~dP~~p~a~~i~~is~~e~~~~~~~g~~~~~~~ggM~~Kl~ 244 (716)
++.+. -++|++|+.+|.+++||.|+++|||||+|+.+|.....++|+..+..+-..-..+|+++..++|||..||.
T Consensus 162 ~~~D~----~dNDsLsA~laaei~ADlLilLsDVdglYt~PPd~~~~~li~~~~~~~~~v~~tfG~~SkvGtGGM~tKv~ 237 (285)
T KOG1154|consen 162 PFGDS----SDNDSLAAILAAEIKADLLILLSDVDGLYTGPPDADPSKLIHTFSPGDPQVSTTFGSKSKVGTGGMETKVK 237 (285)
T ss_pred ccCCC----CcccHHHHHHHHHhccCEEEEEecccccccCCCCCCcceeeeeeccCCCCCccccCccCccCcCcchhhHH
Confidence 43211 25999999999999999999999999999988866667899999998877567788899999999999999
Q ss_pred HHHHHHHcCCcEEEeeCCCcchHHHHhcCCcceeEEecC
Q 005047 245 AAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRD 283 (716)
Q Consensus 245 aa~~a~~~gi~v~I~~g~~~~~l~~~~tg~~iGT~i~~~ 283 (716)
||..|...|++|+|+||..|+.|.+++.|...||.+...
T Consensus 238 AA~~A~~~Gv~viI~~g~~p~~I~~iv~g~kvgt~f~~~ 276 (285)
T KOG1154|consen 238 AAVNALNAGVSVIITNGDAPENITDIVEGKKVGTFFEQL 276 (285)
T ss_pred HHHHHhcCCceEEEeCCCChHHHHHHHhhhhhhhhhhhc
Confidence 999999999999999999999999999999999987765
No 137
>PRK12314 gamma-glutamyl kinase; Provisional
Probab=100.00 E-value=1.5e-39 Score=337.42 Aligned_cols=258 Identities=39% Similarity=0.636 Sum_probs=220.1
Q ss_pred hhcccCeEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhcccCCcccccccccc
Q 005047 10 FVKDVKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNE 89 (716)
Q Consensus 10 ~~~~~~~iVIKiGGs~l~~~~~~~~~~~~~~~a~~I~~l~~~G~~vvIVhGGg~~i~~~~~~~~~~~~~~~~~~~~~~~~ 89 (716)
.+++++++|||||||+|++++++++.+.+.+++++|+.++..|+++|||.+|+.++|+.+++.+.. +..+.
T Consensus 5 ~~~~~~~iViK~Ggs~l~~~~~~~~~~~i~~~~~~I~~~~~~g~~vvlV~Sga~~~g~~~l~~~~~----~~~~~----- 75 (266)
T PRK12314 5 QLENAKRIVIKVGSSTLSYENGKINLERIEQLVFVISDLMNKGKEVILVSSGAIGAGLTKLKLDKR----PTSLA----- 75 (266)
T ss_pred hHhhCCEEEEEeCCCeeeCCCCCcCHHHHHHHHHHHHHHHHCCCeEEEEeeCcccccceeeccccC----CCCHH-----
Confidence 356678999999999999888888999999999999999999999999877888889866543221 11111
Q ss_pred hhHHHHHHhchHHHHHHHHHHhccCCCccceEEecCccCCchhhHhHHHHHHHHHHhCCCeEEeeCCCceecCCCCCCCC
Q 005047 90 LDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDS 169 (716)
Q Consensus 90 l~~~~~~a~g~~~~~~~~~~~l~~~gi~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~g~iPV~~g~d~v~~~~~~~~~~ 169 (716)
.++++.++||..++.+|...|..+|++++|+++|+++|.++..+.+..+.|+.+++.|+|||+++||.+...+ .
T Consensus 76 -~~~a~aa~Gq~~l~~~~~~~~~~~g~~~~q~llT~~~~~~~~~~~~~~~~l~~ll~~g~IPVv~~nd~v~~~~-----~ 149 (266)
T PRK12314 76 -EKQALAAVGQPELMSLYSKFFAEYGIVVAQILLTRDDFDSPKSRANVKNTFESLLELGILPIVNENDAVATDE-----I 149 (266)
T ss_pred -HHHHHHHHhHHHHHHHHHHHHHHcCCeEEEEEEecccccchHHHHHHHHHHHHHHHCCCEEEEcCCCCeeecc-----c
Confidence 2469999999999999999999999999999999999988888888889999999999999999999887632 2
Q ss_pred CceeecchHHHHHHHhhcCCCEEEEeecCCccccCCC-cccccccccccch--hchHHHHhcCCCCCcccCCcHHHHHHH
Q 005047 170 SGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPP-SEPNSKLIHTYIR--AKHQAEITFGDKSRVGRGGMTAKVNAA 246 (716)
Q Consensus 170 g~~~~~sD~~A~~lA~~L~Ad~Li~~TDVdGVy~~dP-~~p~a~~i~~is~--~e~~~~~~~g~~~~~~~ggM~~Kl~aa 246 (716)
+..++++|++|++||.+|+||+|+|+|||||||++|| .+|++++|++|++ .+..+.. .++.+.+++|||.+|+++|
T Consensus 150 ~~~~~~~D~~Aa~lA~~l~Ad~liilTDVdGVy~~dP~~~~~a~~i~~I~~~~~~~~~~~-~~~~~~~~tGGM~~Kl~aa 228 (266)
T PRK12314 150 DTKFGDNDRLSAIVAKLVKADLLIILSDIDGLYDKNPRINPDAKLRSEVTEITEEILALA-GGAGSKFGTGGMVTKLKAA 228 (266)
T ss_pred cceecchHHHHHHHHHHhCCCEEEEEeCCCcccCCCCCCCCCCeEEEEecCCCHHHHHHh-ccCCCCcccCchHHHHHHH
Confidence 3336889999999999999999999999999999999 4899999999985 3333322 3334457999999999999
Q ss_pred HHHHHcCCcEEEeeCCCcchHHHHhcCCcceeEEecC
Q 005047 247 YCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRD 283 (716)
Q Consensus 247 ~~a~~~gi~v~I~~g~~~~~l~~~~tg~~iGT~i~~~ 283 (716)
..|.++|++++|+||+.|+++.+++.|+..||++.+.
T Consensus 229 ~~a~~~gv~v~I~~g~~~~~i~~~l~g~~~GT~i~~~ 265 (266)
T PRK12314 229 KFLMEAGIKMVLANGFNPSDILDFLEGESIGTLFAPK 265 (266)
T ss_pred HHHHHCCCeEEEEcCCCchHHHHHHcCCCCceEEccC
Confidence 9999999999999999999999999998899998754
No 138
>PRK13402 gamma-glutamyl kinase; Provisional
Probab=100.00 E-value=3.5e-38 Score=338.55 Aligned_cols=252 Identities=38% Similarity=0.568 Sum_probs=217.4
Q ss_pred ccCeEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhcccCCcccccccccchhH
Q 005047 13 DVKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDG 92 (716)
Q Consensus 13 ~~~~iVIKiGGs~l~~~~~~~~~~~~~~~a~~I~~l~~~G~~vvIVhGGg~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~ 92 (716)
+++++||||||+++++.++.++.+.+.+++++|+.|++.|+++||||||+..+|...+.. ..++ .+. .+
T Consensus 4 ~~kriVIKiGgs~L~~~~~~l~~~~i~~la~~I~~l~~~G~~vvlVsSGava~G~~~l~~----~~~~-~~~------~~ 72 (368)
T PRK13402 4 NWKRIVVKVGSSLLTPHHQGCSSHYLLGLVQQIVYLKDQGHQVVLVSSGAVAAGYHKLGF----IDRP-SVP------EK 72 (368)
T ss_pred CCcEEEEEEchhhccCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeCChhhcCccccCC----CCCC-Ccc------HH
Confidence 468999999999999877789999999999999999999999999999998887633221 1111 111 35
Q ss_pred HHHHHhchHHHHHHHHHHhccCCCccceEEecCccCCchhhHhHHHHHHHHHHhCCCeEEeeCCCceecCCCCCCCCCce
Q 005047 93 KACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGI 172 (716)
Q Consensus 93 ~~~~a~g~~~~~~~~~~~l~~~gi~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~g~iPV~~g~d~v~~~~~~~~~~g~~ 172 (716)
++++++||..++.+|...|..+|+++.|+++|.+|+.++..|.+..+.+..+|+.|+|||+++||.+.. ++..
T Consensus 73 qalaavGq~~l~~~~~~~f~~~g~~~aqvLlT~~d~~~~~~y~n~~~~l~~LL~~g~IPIinenD~v~~-------~el~ 145 (368)
T PRK13402 73 QAMAAAGQGLLMATWSKLFLSHGFPAAQLLLTHGDLRDRERYINIRNTINVLLERGILPIINENDAVTT-------DRLK 145 (368)
T ss_pred HHHHHhhHHHHHHHHHHHHHHCCCeEEEEEEecchhhhHHHHHHHHHHHHHHHHCCcEEEEeCCCcEee-------cccc
Confidence 799999999999999999999999999999998888777677766789999999999999998898776 3445
Q ss_pred eecchHHHHHHHhhcCCCEEEEeecCCccccCCC-cccccccccccch--hchHHHHhcCCCCCcccCCcHHHHHHHHHH
Q 005047 173 FWDNDSLAGLLALELKADLLVLLSDVEGLYSGPP-SEPNSKLIHTYIR--AKHQAEITFGDKSRVGRGGMTAKVNAAYCA 249 (716)
Q Consensus 173 ~~~sD~~A~~lA~~L~Ad~Li~~TDVdGVy~~dP-~~p~a~~i~~is~--~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a 249 (716)
|+++|++|+++|.+|+||.|+|+|||||||++|| .+|++++|++|++ +++.. +..++.+..++|||.+|+++|..|
T Consensus 146 ~GdnD~lAa~vA~~l~Ad~LiilTDVdGvy~~dP~~~p~a~~I~~I~~i~~e~~~-l~~~~~s~~gtGGM~~Kl~Aa~~a 224 (368)
T PRK13402 146 VGDNDNLSAMVAALADADTLIILSDIDGLYDQNPRTNPDAKLIKQVTEINAEIYA-MAGGAGSNVGTGGMRTKIQAAKIA 224 (368)
T ss_pred cCChHHHHHHHHHHhCCCEEEEEecCCeEEeCCCCCCCCCEEEEEeccCcHHHHH-HhcccccCcCcCCchHHHHHHHHH
Confidence 7899999999999999999999999999999999 5999999999986 45543 333344568899999999999999
Q ss_pred HHcCCcEEEeeCCCcchHHHHhcCCcceeEEecC
Q 005047 250 ACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRD 283 (716)
Q Consensus 250 ~~~gi~v~I~~g~~~~~l~~~~tg~~iGT~i~~~ 283 (716)
.++|++++|+|+..|+.|.+++.|+..||++.+.
T Consensus 225 ~~~gi~v~I~~g~~~~~l~~~l~g~~~GT~i~~~ 258 (368)
T PRK13402 225 MSHGIETFIGNGFTADIFNQLLKGQNPGTYFTPE 258 (368)
T ss_pred HHcCCcEEEEcCCCchHHHHHhcCCCCceEEecC
Confidence 9999999999999999999999999999999876
No 139
>cd04242 AAK_G5K_ProB AAK_G5K_ProB: Glutamate-5-kinase (G5K) catalyzes glutamate-dependent ATP cleavage; G5K transfers the terminal phosphoryl group of ATP to the gamma-carboxyl group of glutamate, in the first and controlling step of proline (and, in mammals, ornithine) biosynthesis. G5K is subject to feedback allosteric inhibition by proline or ornithine. In microorganisms and plants, proline plays an important role as an osmoprotectant and, in mammals, ornithine biosynthesis is crucial for proper ammonia detoxification, since a G5K mutation has been shown to cause human hyperammonaemia. Microbial G5K generally consists of two domains: a catalytic G5K domain and one PUA (pseudo uridine synthases and archaeosine-specific transglycosylases) domain, and some lack the PUA domain. G5K requires free Mg for activity, it is tetrameric, and it aggregates to higher forms in a proline-dependent way. G5K lacking the PUA domain remains tetrameric, active, and proline-inhibitable, but the Mg requir
Probab=100.00 E-value=1.5e-37 Score=321.04 Aligned_cols=247 Identities=50% Similarity=0.723 Sum_probs=210.9
Q ss_pred eEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhcccCCcccccccccchhHHHH
Q 005047 16 RLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKAC 95 (716)
Q Consensus 16 ~iVIKiGGs~l~~~~~~~~~~~~~~~a~~I~~l~~~G~~vvIVhGGg~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 95 (716)
++|||||||++++++++++.+++.+++++|+++++.|+++||||||+.++|+..++... .+..+. ..+++
T Consensus 1 ~iViK~GGs~i~~~~~~~~~~~i~~~~~~i~~~~~~~~~viiV~sg~~~~g~~~~~~~~----~~~~~~------~~~~~ 70 (251)
T cd04242 1 RIVVKVGSSLLTDEDGGLDLGRLASLVEQIAELRNQGKEVILVSSGAVAAGRQRLGLEK----RPKTLP------EKQAL 70 (251)
T ss_pred CEEEEeCCCeeeCCCCCcCHHHHHHHHHHHHHHHHCCCeEEEEecCchhhChhhhccCc----CCCchh------HHHHH
Confidence 58999999999998877788899999999999999999999999998888865433211 111111 13589
Q ss_pred HHhchHHHHHHHHHHhccCCCccceEEecCccCCchhhHhHHHHHHHHHHhCCCeEEeeCCCceecCCCCCCCCCceeec
Q 005047 96 AAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWD 175 (716)
Q Consensus 96 ~a~g~~~~~~~~~~~l~~~gi~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~g~iPV~~g~d~v~~~~~~~~~~g~~~~~ 175 (716)
.++||..++.+|...|..+|+++.|+++++++|.+...+.+..+.|+.+|+.|+|||+++||.+.+. +..++|
T Consensus 71 ~~~Gq~~l~~~~~~~l~~~Gi~~~q~l~t~~~~~~~~~~~~~~~~i~~ll~~g~iPVv~~~d~v~~~-------~~~~~~ 143 (251)
T cd04242 71 AAVGQSLLMALYEQLFAQYGIKVAQILLTRDDFEDRKRYLNARNTLETLLELGVIPIINENDTVATE-------EIRFGD 143 (251)
T ss_pred HHHhHHHHHHHHHHHHHHcCCeEEEEEEehhHhcchHHHHHHHHHHHHHHHCCCEEEEcCCCCeeee-------ccccCC
Confidence 9999999999999999999999999988888887655555557899999999999999998988762 223589
Q ss_pred chHHHHHHHhhcCCCEEEEeecCCccccCCCc-ccccccccccc--hhchHHHHhcCCCCCcccCCcHHHHHHHHHHHHc
Q 005047 176 NDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYI--RAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACA 252 (716)
Q Consensus 176 sD~~A~~lA~~L~Ad~Li~~TDVdGVy~~dP~-~p~a~~i~~is--~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a~~~ 252 (716)
+|++|+++|.+|+||+|+|+|||||||++||+ +|++++|++++ ++|+.++. .+..+.+++|||.+|++++..+.++
T Consensus 144 ~D~~A~~lA~~l~Ad~liilTDVdGvy~~dP~~~~~a~~i~~i~~~~~e~~~~~-~~~~~~~~tggm~~Kl~a~~~a~~~ 222 (251)
T cd04242 144 NDRLSALVAGLVNADLLILLSDVDGLYDKNPRENPDAKLIPEVEEITDEIEAMA-GGSGSSVGTGGMRTKLKAARIATEA 222 (251)
T ss_pred hHHHHHHHHHHcCCCEEEEecCcCEEEeCCCCCCCCCeEEEEecCChHHHHHHh-cccCcCcccCCcHHHHHHHHHHHHC
Confidence 99999999999999999999999999999994 78999999999 88887653 2334568999999999999999999
Q ss_pred CCcEEEeeCCCcchHHHHhcCCcceeEE
Q 005047 253 GIPVVITSGFAMDSIIKVLEGKRVGTLF 280 (716)
Q Consensus 253 gi~v~I~~g~~~~~l~~~~tg~~iGT~i 280 (716)
|++|+|+||+.|+.+.+++.|+..||++
T Consensus 223 gi~v~I~~g~~~~~i~~~l~g~~~GT~i 250 (251)
T cd04242 223 GIPVVIANGRKPDVLLDILAGEAVGTLF 250 (251)
T ss_pred CCcEEEEcCCCCCHHHHHHcCCCCCeEe
Confidence 9999999999999999999998899986
No 140
>PTZ00489 glutamate 5-kinase; Provisional
Probab=100.00 E-value=3.9e-37 Score=316.77 Aligned_cols=251 Identities=33% Similarity=0.527 Sum_probs=211.7
Q ss_pred hhcccCeEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhcccCCcccccccccc
Q 005047 10 FVKDVKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNE 89 (716)
Q Consensus 10 ~~~~~~~iVIKiGGs~l~~~~~~~~~~~~~~~a~~I~~l~~~G~~vvIVhGGg~~i~~~~~~~~~~~~~~~~~~~~~~~~ 89 (716)
.+++.+++|||+|||+|++++ .++...+..++++|+.|++ ++++||||||+...|...++... ...
T Consensus 4 ~~~~~~riVIKlG~Svit~~~-~~~~~~~~~l~~~i~~l~~-~~~vilVssGava~g~~~~~~~~------------~~~ 69 (264)
T PTZ00489 4 ILKSVKRIVVKVGSSILVDNQ-EIAAHRIEALCRFIADLQT-KYEVILVTSGAVAAGYTKKEMDK------------SYV 69 (264)
T ss_pred hhhcCCEEEEEeccceeeCCC-CcCHHHHHHHHHHHHHHhc-CCeEEEEecChHhcChhhcCCCc------------ccc
Confidence 456789999999999999765 6888889999999999986 79999999998777754322111 011
Q ss_pred hhHHHHHHhchHHHHHHHHHHhccCCCccceEEecCccCCchhhHhHHHHHHHHHHhCCCeEEeeCCCceecCCCCCCCC
Q 005047 90 LDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDS 169 (716)
Q Consensus 90 l~~~~~~a~g~~~~~~~~~~~l~~~gi~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~g~iPV~~g~d~v~~~~~~~~~~ 169 (716)
..+++++++||..++.+|...|..+|+.+.|++++..++.++..+.+..+.+++||+.|+|||+++||.+.. .
T Consensus 70 ~~~qa~aaiGq~~L~~~y~~~f~~~~~~~aqiLlt~~d~~~~~~~~n~~~~l~~lL~~g~VPIinend~~~~-------~ 142 (264)
T PTZ00489 70 PNKQALASMGQPLLMHMYYTELQKHGILCAQMLLAAYDLDSRKRTINAHNTIEVLISHKVIPIINENDATAL-------H 142 (264)
T ss_pred HHHHHHHHhCHHHHHHHHHHHHHhCCCeEEEeeeeccccccchhhHHHHHHHHHHHHCCCEEEECCCCCccc-------c
Confidence 246799999999999999999999999999999998888887777778899999999999999999887765 2
Q ss_pred CceeecchHHHHHHHhhcCCCEEEEeecCCccccCCC-ccccccc---ccccchhchHHHHhcCCCCCcccCCcHHHHHH
Q 005047 170 SGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPP-SEPNSKL---IHTYIRAKHQAEITFGDKSRVGRGGMTAKVNA 245 (716)
Q Consensus 170 g~~~~~sD~~A~~lA~~L~Ad~Li~~TDVdGVy~~dP-~~p~a~~---i~~is~~e~~~~~~~g~~~~~~~ggM~~Kl~a 245 (716)
...|+|+|++|+++|.+++||+|+|+|||||||++|| ++|++++ |++++.++... ..+..+.+++|||.+|+++
T Consensus 143 e~~~gdnD~lAa~lA~~l~Ad~LiilTDVdGVy~~dP~~~~~A~~~~~i~~i~~~~~~~--~~~~~~~~~tGGM~~Kl~a 220 (264)
T PTZ00489 143 ELVFGDNDRLSALVAHHFKADLLVILSDIDGYYTENPRTSTDAKIRSVVHELSPDDLVA--EATPNNRFATGGIVTKLQA 220 (264)
T ss_pred eeEeCChHHHHHHHHHHhCCCEEEEeeccCeeEcCCCCCCCccceeeeeccCCHHHHHH--hcCcCCCcccCChHHHHHH
Confidence 2345799999999999999999999999999999999 5888887 67788776643 2233456899999999999
Q ss_pred HHHHHHcCCcEEEeeCCCcchHHHHhcCC--cceeEEecC
Q 005047 246 AYCAACAGIPVVITSGFAMDSIIKVLEGK--RVGTLFHRD 283 (716)
Q Consensus 246 a~~a~~~gi~v~I~~g~~~~~l~~~~tg~--~iGT~i~~~ 283 (716)
|..+.+.|++|+|+||+.|+.+.+++.|+ ..||++.+.
T Consensus 221 a~~a~~~Gi~v~I~~g~~~~~i~~~l~g~~~~~GT~~~~~ 260 (264)
T PTZ00489 221 AQFLLERGGKMYLSSGFHLEKARDFLIGGSHEIGTLFYPR 260 (264)
T ss_pred HHHHHHCCCCEEEEeCCCchHHHHHHcCCCCCCceEEeec
Confidence 99999999999999999999999999765 379998764
No 141
>PRK05429 gamma-glutamyl kinase; Provisional
Probab=100.00 E-value=2.8e-37 Score=334.82 Aligned_cols=256 Identities=43% Similarity=0.662 Sum_probs=215.1
Q ss_pred hhcccCeEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhcccCCcccccccccc
Q 005047 10 FVKDVKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNE 89 (716)
Q Consensus 10 ~~~~~~~iVIKiGGs~l~~~~~~~~~~~~~~~a~~I~~l~~~G~~vvIVhGGg~~i~~~~~~~~~~~~~~~~~~~~~~~~ 89 (716)
.+++++++|||||||++++++++++.+.+.+++++|+.+++.|+++||||||+...+...++ ....+..+.
T Consensus 4 ~~~~~~~iVIKiGGs~l~~~~~~l~~~~i~~la~~I~~l~~~g~~vViV~sGai~~g~~~l~----l~~~~~~~~----- 74 (372)
T PRK05429 4 ALSDARRIVVKVGSSLLTGGGGGLDRARIAELARQIAALRAAGHEVVLVSSGAVAAGRERLG----LPERPKTLA----- 74 (372)
T ss_pred chhhCCEEEEEeChhhccCCCCCcCHHHHHHHHHHHHHHHHCCCeEEEEcccHhhhhHhhcC----CCCCCCchH-----
Confidence 45677899999999999998778999999999999999999999999999885433332222 111111111
Q ss_pred hhHHHHHHhchHHHHHHHHHHhccCCCccceEEecCccCCchhhHhHHHHHHHHHHhCCCeEEeeCCCceecCCCCCCCC
Q 005047 90 LDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDS 169 (716)
Q Consensus 90 l~~~~~~a~g~~~~~~~~~~~l~~~gi~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~g~iPV~~g~d~v~~~~~~~~~~ 169 (716)
..++++++||..++.+|...|..+|+++.|++++.++|.....+.+..+.|..|++.|+|||+++||.+...
T Consensus 75 -~~qa~aavGq~~L~~~~~~~l~~~gi~~~qil~t~~d~~~~~~~ln~~~~i~~Ll~~g~IPVi~~nd~v~~~------- 146 (372)
T PRK05429 75 -EKQAAAAVGQSRLMQAYEELFARYGITVAQILLTRDDLEDRERYLNARNTLRTLLELGVVPIINENDTVATD------- 146 (372)
T ss_pred -HHHHHHHHhHHHHHHHHHHHHHHCCCCEEEEEeehhHhhhhhHhhhHHHHHHHHHHCCCEEEEcCCCcccee-------
Confidence 235889999999999999999999999999988988886665565557899999999999999988887762
Q ss_pred CceeecchHHHHHHHhhcCCCEEEEeecCCccccCCC-cccccccccccch--hchHHHHhcCCCCCcccCCcHHHHHHH
Q 005047 170 SGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPP-SEPNSKLIHTYIR--AKHQAEITFGDKSRVGRGGMTAKVNAA 246 (716)
Q Consensus 170 g~~~~~sD~~A~~lA~~L~Ad~Li~~TDVdGVy~~dP-~~p~a~~i~~is~--~e~~~~~~~g~~~~~~~ggM~~Kl~aa 246 (716)
...++|+|++|++||.+|+||+|+|+|||||||++|| .+|++++|+++++ +|+.+++ .++.+.+++|||.+|+++|
T Consensus 147 ~l~~gd~D~~Aa~lA~~l~Ad~LiilTDVdGVy~~dP~~~p~a~~I~~i~~~~~e~~~~~-~~~~~~~gtGGM~~Kl~aa 225 (372)
T PRK05429 147 EIKFGDNDTLSALVANLVEADLLILLTDVDGLYTADPRKNPDAKLIPEVEEITDELEAMA-GGAGSGLGTGGMATKLEAA 225 (372)
T ss_pred cccccChHHHHHHHHHHcCCCEEEEecCCCeeEcCCCCCCCCceEEEEeccCCHHHHHHh-cCCCCCcCcCCcHHHHHHH
Confidence 2235899999999999999999999999999999999 5799999999987 4566543 3334568999999999999
Q ss_pred HHHHHcCCcEEEeeCCCcchHHHHhcCCcceeEEecC
Q 005047 247 YCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRD 283 (716)
Q Consensus 247 ~~a~~~gi~v~I~~g~~~~~l~~~~tg~~iGT~i~~~ 283 (716)
..+.++|++|+|+||..|+.+.+++.|+..||++.+.
T Consensus 226 ~~a~~~Gi~v~I~~g~~~~~l~~~l~g~~~GT~i~~~ 262 (372)
T PRK05429 226 RIATRAGIPVVIASGREPDVLLRLLAGEAVGTLFLPQ 262 (372)
T ss_pred HHHHHCCCeEEEEcCCCccHHHHHhcCCCCCEEEeeC
Confidence 9999999999999999999999999999899999876
No 142
>TIGR01027 proB glutamate 5-kinase. Bacterial ProB proteins hit the full length of this model, but the ProB-like domain of delta 1-pyrroline-5-carboxylate synthetase does not hit the C-terminal 100 residues of this model. The noise cutoff is set low enough to hit delta 1-pyrroline-5-carboxylate synthetase and other partial matches to this family.
Probab=100.00 E-value=7.9e-37 Score=329.88 Aligned_cols=252 Identities=43% Similarity=0.652 Sum_probs=214.1
Q ss_pred CeEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhcccCCcccccccccchhHHH
Q 005047 15 KRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKA 94 (716)
Q Consensus 15 ~~iVIKiGGs~l~~~~~~~~~~~~~~~a~~I~~l~~~G~~vvIVhGGg~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 94 (716)
+++|||||||+|+++++.++.+.+..++++|+.++++|+++||||||+...+...++ ....+..+. .+++
T Consensus 1 ~riVIKiGgs~l~~~~~~~~~~~i~~la~~I~~l~~~g~~vvlV~sG~~~~g~~~lg----~~~~~~~l~------~~qa 70 (363)
T TIGR01027 1 QRIVVKVGSSSLTGSSGSLDRSHIAELVEQVAALHAAGHEVVIVSSGAIAAGFEALG----LPERPKTLA------EKQA 70 (363)
T ss_pred CeEEEEeccceEeCCCCCcCHHHHHHHHHHHHHHHHCCCeEEEEeCcHHhcCccccC----CCCCccchH------HHHH
Confidence 479999999999998777999999999999999999999999999998655543322 111112221 2469
Q ss_pred HHHhchHHHHHHHHHHhccCCCccceEEecCccCCchhhHhHHHHHHHHHHhCCCeEEeeCCCceecCCCCCCCCCceee
Q 005047 95 CAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFW 174 (716)
Q Consensus 95 ~~a~g~~~~~~~~~~~l~~~gi~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~g~iPV~~g~d~v~~~~~~~~~~g~~~~ 174 (716)
++++||..++.+|...|..+|+++.|++++.++|.++..+.+....|..||+.|+|||++.||.+.. ++..++
T Consensus 71 ~aa~Gq~~l~~~~~~~l~~~Gi~~aqillt~~d~~~~~~~lna~~~i~~Ll~~g~iPVi~end~v~~-------~~l~~g 143 (363)
T TIGR01027 71 LAAVGQVRLMQLYEQLFSQYGIKVAQILLTRADFSDRERYLNARNTLEALLELGVVPIINENDTVAT-------EEIKFG 143 (363)
T ss_pred HHHhChHHHHHHHHHHHHHcCCeEEEEEEeccchhhHHHHHHHHHHHHHHHhCCCEEEEeCCCceee-------eecCcC
Confidence 9999999999999999999999999999999998877777766799999999999999998888765 233458
Q ss_pred cchHHHHHHHhhcCCCEEEEeecCCccccCCC-cccccccccccchhc-hHHHHhcCCCCCcccCCcHHHHHHHHHHHHc
Q 005047 175 DNDSLAGLLALELKADLLVLLSDVEGLYSGPP-SEPNSKLIHTYIRAK-HQAEITFGDKSRVGRGGMTAKVNAAYCAACA 252 (716)
Q Consensus 175 ~sD~~A~~lA~~L~Ad~Li~~TDVdGVy~~dP-~~p~a~~i~~is~~e-~~~~~~~g~~~~~~~ggM~~Kl~aa~~a~~~ 252 (716)
++|++|+++|.+|+||.|+|+|||||||++|| ++|++++|+++++.+ ....+..++.+.+++|||.+|+++|..|.+.
T Consensus 144 d~D~lAa~lA~~l~Ad~liilTDVdGVy~~dP~~~p~A~~I~~i~~~~~~~~~i~~~~~~~~gtGGM~~Kl~Aa~~a~~~ 223 (363)
T TIGR01027 144 DNDTLSALVAILVGADLLVLLTDVDGLYDADPRTNPDAKLIPVVEEITDLLLGVAGDSGSSVGTGGMRTKLQAADLATRA 223 (363)
T ss_pred ChHHHHHHHHHHcCCCEEEEEeCCCcccCCCCCCCCCCeEEEEeccCcHHHHHhhcCCCcCcCcCCchHHHHHHHHHHHC
Confidence 99999999999999999999999999999999 699999999998653 3333444444468999999999999999999
Q ss_pred CCcEEEeeCCCcchHHHHhcCCcceeEEecC
Q 005047 253 GIPVVITSGFAMDSIIKVLEGKRVGTLFHRD 283 (716)
Q Consensus 253 gi~v~I~~g~~~~~l~~~~tg~~iGT~i~~~ 283 (716)
|++++|+|+..|+.+.+++.|+..||++.+.
T Consensus 224 gi~v~I~~g~~~~~l~~~l~g~~~GT~i~~~ 254 (363)
T TIGR01027 224 GVPVIIASGSKPEKIADALEGAPVGTLFHAQ 254 (363)
T ss_pred CCeEEEEeCCCccHHHHHhcCCCCcEEEeeC
Confidence 9999999999999999999999899999876
No 143
>COG0548 ArgB Acetylglutamate kinase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.4e-33 Score=284.84 Aligned_cols=242 Identities=25% Similarity=0.325 Sum_probs=187.2
Q ss_pred ccCeEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhcccCCccc-ccccc---c
Q 005047 13 DVKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLAD-LQKPQ---N 88 (716)
Q Consensus 13 ~~~~iVIKiGGs~l~~~~~~~~~~~~~~~a~~I~~l~~~G~~vvIVhGGg~~i~~~~~~~~~~~~~~~~~-~~~~~---~ 88 (716)
++|++|||+||+++.+++ .+.+|+++|+.|+..|.++|||||||++++..+.+ .++++.|.+ ++.+. +
T Consensus 1 ~~k~~VIK~GG~~~~~~~------l~~~~~~di~lL~~~G~~~VvVHGggp~I~~~l~~--~gie~~f~~glRvTd~~tl 72 (265)
T COG0548 1 RGKTIVIKLGGSAMEDEN------LLEAFASDIALLKSVGIRPVVVHGGGPQIDEMLAK--LGIEPEFVKGLRVTDAETL 72 (265)
T ss_pred CCceEEEEECceeecCch------HHHHHHHHHHHHHHCCCcEEEEeCCchHHHHHHHH--cCCCCeeeCCEEcCCHHHH
Confidence 368999999999999865 47899999999999999999999999999997744 456666654 44432 3
Q ss_pred chhHHHHHHhchHHHHHHHHHHhccCCCccceEEecCc--------------cCCchhh-HhHHHHHHHHHHhCCCeEEe
Q 005047 89 ELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDS--------------DFRDEDF-RKQLYDTVQSLLDLRVIPIF 153 (716)
Q Consensus 89 ~l~~~~~~a~g~~~~~~~~~~~l~~~gi~~~~~~~~~~--------------~~~~~~~-~~~~~~~i~~ll~~g~iPV~ 153 (716)
+..++++. |+... .+...|...|..+..++..++ |++..+. ..++++.|+.++++|+|||+
T Consensus 73 evv~mvl~--G~vNk--~iva~l~~~g~~avGlsg~Dg~li~A~~~~~~~~id~g~vG~i~~Vn~~~i~~ll~~~~IpVi 148 (265)
T COG0548 73 EVVEMVLG--GTVNK--EIVARLSKHGGQAVGLSGVDGNLVTAKKLDVDDGVDLGYVGEIRKVNPELIERLLDNGAIPVI 148 (265)
T ss_pred HHHHHHHH--HHHHH--HHHHHHHHhCCcceeeeecCCCEEEEEEcccccccccceeeeEEEECHHHHHHHHhCCCceEE
Confidence 33333332 12221 223445555544333322221 1222222 22678999999999999999
Q ss_pred eCCCceecCCCCCCCCCcee-ecchHHHHHHHhhcCCCEEEEeecCCccccCCCcccccccccccchhchHHHHhcCCCC
Q 005047 154 NENDAVSTRKAPYEDSSGIF-WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKS 232 (716)
Q Consensus 154 ~g~d~v~~~~~~~~~~g~~~-~~sD~~A~~lA~~L~Ad~Li~~TDVdGVy~~dP~~p~a~~i~~is~~e~~~~~~~g~~~ 232 (716)
++ ++.+.+|..| +|+|++|..+|.+|+|++|+++|||+|||+++| +| ++|++++.+|+++++.++
T Consensus 149 ap--------ia~~~~G~~~NvnaD~~A~~iA~aLkAekLi~ltdv~Gvl~~~~-~~--s~i~~~~~~~~~~li~~~--- 214 (265)
T COG0548 149 AP--------IAVDEDGETLNVNADTAAGALAAALKAEKLILLTDVPGVLDDKG-DP--SLISELDAEEAEELIEQG--- 214 (265)
T ss_pred ec--------ceECCCCcEEeeCHHHHHHHHHHHcCCCeEEEEeCCcccccCCC-Cc--eeeccCCHHHHHHHHhcC---
Confidence 74 3344578888 999999999999999999999999999999865 33 699999999999988764
Q ss_pred CcccCCcHHHHHHHHHHHHcCCc-EEEeeCCCcchH-HHHhcCCcceeEEe
Q 005047 233 RVGRGGMTAKVNAAYCAACAGIP-VVITSGFAMDSI-IKVLEGKRVGTLFH 281 (716)
Q Consensus 233 ~~~~ggM~~Kl~aa~~a~~~gi~-v~I~~g~~~~~l-~~~~tg~~iGT~i~ 281 (716)
.++|||+||+++|..|++.|++ |||+||..++++ .++|++..+||.+.
T Consensus 215 -~i~~GMi~Kv~~a~~A~~~Gv~~v~ii~g~~~~~ll~eLFt~~giGT~i~ 264 (265)
T COG0548 215 -IITGGMIPKVEAALEALESGVRRVHIISGRVPHSLLLELFTRDGIGTMIV 264 (265)
T ss_pred -CccCccHHHHHHHHHHHHhCCCeEEEecCCCcchHHHHHhcCCCcceEec
Confidence 7899999999999999999997 999999999997 88999999999875
No 144
>COG1608 Predicted archaeal kinase [General function prediction only]
Probab=100.00 E-value=4.1e-32 Score=264.65 Aligned_cols=240 Identities=21% Similarity=0.308 Sum_probs=176.0
Q ss_pred EEEEeCCcccccCCC--cccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhcccCCccccc-ccccchhHH
Q 005047 17 LVVKVGTAVVTRSDG--RLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQ-KPQNELDGK 93 (716)
Q Consensus 17 iVIKiGGs~l~~~~~--~~~~~~~~~~a~~I~~l~~~G~~vvIVhGGg~~i~~~~~~~~~~~~~~~~~~~-~~~~~l~~~ 93 (716)
+|+|||||+||+|+. +++++++++++++|.. ..-.++|||||| ++|||..+..+.. + ...+.. ..-..+...
T Consensus 3 ~IlKlGGSvITdK~~p~t~r~~~l~ria~eI~~--~~~~~livVHGg-GSFGHp~Ak~~~~-~-~~~~~~s~~G~~~~~~ 77 (252)
T COG1608 3 IILKLGGSVITDKDKPRTVREDRLRRIAREISN--GKPEKLIVVHGG-GSFGHPAAKEFGL-E-GLKNYLSPLGFSLTHL 77 (252)
T ss_pred EEEEecceeeecCCCcchhhHHHHHHHHHHHhc--CCcccEEEEecC-ccccCHHHHHhCc-c-ccccccCccchHHHHH
Confidence 899999999999976 5677889999999875 222378999976 7799998765543 1 111110 000111222
Q ss_pred HHHHhchHHHHHHHHHHhccCCCccc-----eEEecCccCCchhhHhHHHHHHHHHHhCCCeEEeeCCCceecCCCCCCC
Q 005047 94 ACAAVGQSSLMALYDTLFSQLDVTSS-----QLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYED 168 (716)
Q Consensus 94 ~~~a~g~~~~~~~~~~~l~~~gi~~~-----~~~~~~~~~~~~~~~~~~~~~i~~ll~~g~iPV~~g~d~v~~~~~~~~~ 168 (716)
+|..+.... ...|.+.|+.+. ..+..++.+ .+ ...+.+.++|+.|++||++| |++...+
T Consensus 78 am~~L~~~V-----~~~l~~~Gv~av~~~P~s~~~~~gr~----~~-~~l~~i~~~l~~gfvPvl~G-DVv~d~~----- 141 (252)
T COG1608 78 AMLELNSIV-----VDALLDAGVRAVSVVPISFSTFNGRI----LY-TYLEAIKDALEKGFVPVLYG-DVVPDDD----- 141 (252)
T ss_pred HHHHHHHHH-----HHHHHhcCCccccccCcceeecCCce----ee-chHHHHHHHHHcCCEeeeec-ceEEcCC-----
Confidence 333333322 344545555442 122111211 11 12578999999999999999 8888743
Q ss_pred CCceeecchHHHHHHHhhcCCCEEEEeecCCccccCCC-cccccccccccchhchHHHHhcCCCCCcccCCcHHHHHHHH
Q 005047 169 SSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAY 247 (716)
Q Consensus 169 ~g~~~~~sD~~A~~lA~~L~Ad~Li~~TDVdGVy~~dP-~~p~a~~i~~is~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~ 247 (716)
.|..++|+|.++..||++|++|+++|+|||||||+.|| +.|+.+.++++..... ..|+.+.|+||||..|+++++
T Consensus 142 ~g~~IiSGDdIv~~LA~~l~pd~v~f~tdVdGVy~~~p~~~p~~~~l~~i~~~~~----~~gs~~~DVTGGi~~Kl~~~~ 217 (252)
T COG1608 142 NGYEIISGDDIVLHLAKELKPDRVIFLTDVDGVYDRDPGKVPDARLLSEIEGRVA----LGGSGGTDVTGGIAKKLEALL 217 (252)
T ss_pred CceEEEeccHHHHHHHHHhCCCEEEEEecCCceecCCCCcCccccchhhhhhhhh----hcCcCcccchhhHHHHHHHHH
Confidence 35567999999999999999999999999999999999 4888877777755322 245556799999999999999
Q ss_pred HHHHcCCcEEEeeCCCcchHHHHhcCCcceeEEe
Q 005047 248 CAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFH 281 (716)
Q Consensus 248 ~a~~~gi~v~I~~g~~~~~l~~~~tg~~iGT~i~ 281 (716)
...+++.+|+|+||+.|++|..++.|+.+||.+.
T Consensus 218 ~~~~~~~~vyi~ng~~~~ni~~~l~G~~vGT~I~ 251 (252)
T COG1608 218 EIARYGKEVYIFNGNKPENIYRALRGENVGTRID 251 (252)
T ss_pred HHHhcCceEEEECCCCHHHHHHHhcCCCCceEec
Confidence 9999999999999999999999999999999875
No 145
>cd04241 AAK_FomA-like AAK_FomA-like: This CD includes a fosfomycin biosynthetic gene product, FomA, and similar proteins found in a wide range of organisms. Together, the fomA and fomB genes in the fosfomycin biosynthetic gene cluster of Streptomyces wedmorensis confer high-level fosfomycin resistance. FomA and FomB proteins converted fosfomycin to fosfomycin monophosphate and fosfomycin diphosphate in the presence of ATP and a magnesium ion, indicating that FomA and FomB catalyzed phosphorylations of fosfomycin and fosfomycin monophosphate, respectively. FomA and related sequences in this CD are members of the Amino Acid Kinase Superfamily (AAK).
Probab=100.00 E-value=3.3e-32 Score=282.17 Aligned_cols=243 Identities=23% Similarity=0.349 Sum_probs=180.6
Q ss_pred eEEEEeCCcccccCCC--cccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhcccCCcccccccccchhHH
Q 005047 16 RLVVKVGTAVVTRSDG--RLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGK 93 (716)
Q Consensus 16 ~iVIKiGGs~l~~~~~--~~~~~~~~~~a~~I~~l~~~G~~vvIVhGGg~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 93 (716)
++|||||||+|++++. .++.+.+++++++|+.++ |.++|||||||+ +++..+..+ +........+...+..
T Consensus 1 ~iVIKiGGs~l~~~~~~~~~~~~~l~~l~~~l~~l~--g~~vvlVhGgg~-~~~~~~~~~-g~~~g~~~~~~~~l~~--- 73 (252)
T cd04241 1 MIILKLGGSVITDKDRPETIREENLERIARELAEAI--DEKLVLVHGGGS-FGHPKAKEY-GLPDGDGSFSAEGVAE--- 73 (252)
T ss_pred CEEEEEeceEEEcCCCCCccCHHHHHHHHHHHHhcc--CCCEEEEECCCc-ccCHHHHHh-CCCcCCCchhhhhHHH---
Confidence 5899999999998753 678888999999999887 899999998766 555444432 2221111111111111
Q ss_pred HHHHhchHHHHHHHHHHhccCCCccc-----eEEecCccCCchhhHhHHHHHHHHHHhCCCeEEeeCCCceecCCCCCCC
Q 005047 94 ACAAVGQSSLMALYDTLFSQLDVTSS-----QLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYED 168 (716)
Q Consensus 94 ~~~a~g~~~~~~~~~~~l~~~gi~~~-----~~~~~~~~~~~~~~~~~~~~~i~~ll~~g~iPV~~g~d~v~~~~~~~~~ 168 (716)
...++ ..+...+...|..+|+++. +++.+.. ...+.++.+.++++|+.|+|||++| |.+...
T Consensus 74 ~~~~~--~~ln~~~~~~l~~~g~~a~~l~~~~~~~~~~----g~~~~~~~~~l~~ll~~g~iPVi~~-~~~~~~------ 140 (252)
T cd04241 74 THEAM--LELNSIVVDALLEAGVPAVSVPPSSFFVTEN----GRIVSFDLEVIKELLDRGFVPVLHG-DVVLDE------ 140 (252)
T ss_pred HHHHH--HHHHHHHHHHHHHCCCCeEEEChHHeEEecC----CeeeeecHHHHHHHHhCCCEEEEcC-CeEecC------
Confidence 11112 2344455677777787754 3333221 1223356789999999999999997 554431
Q ss_pred CCcee-ecchHHHHHHHhhcCCCEEEEeecCCccccCCCcccccccccccchhchHHHHhc-CCCCCcccCCcHHHHHHH
Q 005047 169 SSGIF-WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITF-GDKSRVGRGGMTAKVNAA 246 (716)
Q Consensus 169 ~g~~~-~~sD~~A~~lA~~L~Ad~Li~~TDVdGVy~~dP~~p~a~~i~~is~~e~~~~~~~-g~~~~~~~ggM~~Kl~aa 246 (716)
.++.+ +|+|++|+.+|.+|+||+|+|+|||||||++|| |++++|++|+++++++++.. ++.+.+++|||.+|+++|
T Consensus 141 ~~~~~~~~~D~~A~~lA~~l~A~~li~ltdv~Gv~~~~P--~~~~~i~~i~~~~~~~~~~~~~~~~~~~tGGm~~Kl~aa 218 (252)
T cd04241 141 GGGITILSGDDIVVELAKALKPERVIFLTDVDGVYDKPP--PDAKLIPEIDVGSLEDILAALGSAGTDVTGGMAGKIEEL 218 (252)
T ss_pred CCCeEEeChHHHHHHHHHHcCCCEEEEEeCCCeeECCCC--CCCeEcceeCccchHHHHHhcCcCCccccCCHHHHHHHH
Confidence 33344 999999999999999999999999999999999 88999999999888876542 223458999999999999
Q ss_pred HHHHHcCCcEEEeeCCCcchHHHHhcCCcceeEE
Q 005047 247 YCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLF 280 (716)
Q Consensus 247 ~~a~~~gi~v~I~~g~~~~~l~~~~tg~~iGT~i 280 (716)
..++++|++++|+||..|+.+.++++|+..||++
T Consensus 219 ~~a~~~Gv~v~I~~g~~~~~l~~~l~g~~~GT~i 252 (252)
T cd04241 219 LELARRGIEVYIFNGDKPENLYRALLGNFIGTRI 252 (252)
T ss_pred HHHHhcCCeEEEEeCCCHHHHHHHHcCCCCceEC
Confidence 9999999999999999999999999999889974
No 146
>PRK12353 putative amino acid kinase; Reviewed
Probab=99.98 E-value=5.3e-31 Score=278.60 Aligned_cols=256 Identities=21% Similarity=0.278 Sum_probs=188.9
Q ss_pred ccCeEEEEeCCcccccCCC--cccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhcccCCcccccccccch
Q 005047 13 DVKRLVVKVGTAVVTRSDG--RLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNEL 90 (716)
Q Consensus 13 ~~~~iVIKiGGs~l~~~~~--~~~~~~~~~~a~~I~~l~~~G~~vvIVhGGg~~i~~~~~~~~~~~~~~~~~~~~~~~~l 90 (716)
+++++||||||++|+++++ +++.+.+.+++++|+.|++.|+++||||||++++|+..++..... .+.. .... +
T Consensus 1 ~~~~iVIklGG~~L~~~~~~~~~~~~~i~~la~~Ia~l~~~G~~vvlV~Gg~~~~G~~~~~~~~~~--~~~~-~~~~--~ 75 (314)
T PRK12353 1 MMKKIVVALGGNALGSTPEEATAQLEAVKKTAKSLVDLIEEGHEVVITHGNGPQVGNILLAQEAAA--SEKN-KVPA--M 75 (314)
T ss_pred CCcEEEEEECHHHhCCCCCCCcccHHHHHHHHHHHHHHHHCCCEEEEEeCCchHhCHHHhcCcccc--ccCC-CCCC--c
Confidence 4689999999999999875 488999999999999999999999999999999999865532211 1110 1111 1
Q ss_pred hHHHHHHhchH----HHHHHHHHHhccCCC------ccceEEecCccCC--ch---------------------------
Q 005047 91 DGKACAAVGQS----SLMALYDTLFSQLDV------TSSQLLVTDSDFR--DE--------------------------- 131 (716)
Q Consensus 91 ~~~~~~a~g~~----~~~~~~~~~l~~~gi------~~~~~~~~~~~~~--~~--------------------------- 131 (716)
..+.+.+.++. .++..+...|..+|+ ...+++++.+|+. ..
T Consensus 76 ~~~~~~a~~qg~l~~~l~~~~~~~l~~~~~~~~~~~~v~q~ll~~~d~~f~~~~~p~g~~~~~~~~~~~~~~~g~~~~~~ 155 (314)
T PRK12353 76 PLDVCGAMSQGYIGYHLQNALRNELLKRGIDKPVATVVTQVVVDANDPAFKNPTKPIGPFYTEEEAEKLAKEKGYTFKED 155 (314)
T ss_pred hhHHHHHHHhHHHHHHHHHHHHHHHHhcCCCcccceEEEEEEEcCCcccccCCCccccccccHHHHHHhhhhcCceeeec
Confidence 12345555555 334577788888887 3456666655522 10
Q ss_pred -h-hHh-----------HHHHHHHHHHhCCCeEEeeCCCceecCCCCCCCCCce-eecchHHHHHHHhhcCCCEEEEeec
Q 005047 132 -D-FRK-----------QLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGI-FWDNDSLAGLLALELKADLLVLLSD 197 (716)
Q Consensus 132 -~-~~~-----------~~~~~i~~ll~~g~iPV~~g~d~v~~~~~~~~~~g~~-~~~sD~~A~~lA~~L~Ad~Li~~TD 197 (716)
+ .++ ++.+.++.+|+.|+|||++|...+..........+.. ++|+|++|+++|.+|+||+|+|+||
T Consensus 156 ~~~~~r~~v~sp~p~~~v~~~~i~~lL~~g~IpV~~g~gg~Pi~~~~~~~~~~~~~~d~D~lAa~lA~~l~Ad~Li~lTd 235 (314)
T PRK12353 156 AGRGYRRVVPSPKPVDIVEIEAIKTLVDAGQVVIAAGGGGIPVIREGGGLKGVEAVIDKDFASAKLAELVDADLLIILTA 235 (314)
T ss_pred CCceeEeccCCCCccccccHHHHHHHHHCCCEEEEcCCCCCCEEEeCCceeeeeEecCHHHHHHHHHHHhCCCEEEEEeC
Confidence 0 021 3478999999999999999821111100000001111 4899999999999999999999999
Q ss_pred CCccccCCCcccccccccccchhchHHHHhcCCCCCcccCCcHHHHHHHHHHH--HcCCcEEEeeCCCcchHHHHhcCCc
Q 005047 198 VEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAA--CAGIPVVITSGFAMDSIIKVLEGKR 275 (716)
Q Consensus 198 VdGVy~~dP~~p~a~~i~~is~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a~--~~gi~v~I~~g~~~~~l~~~~tg~~ 275 (716)
|||||++|| +|++++|++++++++.+++.. +.+.+|||.+|+++|..++ +.|++|+|+| ++.+.+++.|+
T Consensus 236 vdGVy~~~~-~~~a~~i~~i~~~e~~~~~~~---~~~~tGGM~~Kl~aA~~a~~~~~g~~v~I~~---~~~i~~~l~g~- 307 (314)
T PRK12353 236 VDKVYINFG-KPNQKKLDEVTVSEAEKYIEE---GQFAPGSMLPKVEAAISFVESRPGRKAIITS---LEKAKEALEGK- 307 (314)
T ss_pred CccccCCCC-CCCCeECcCcCHHHHHHHHhc---CCcCCCCcHHHHHHHHHHHHHcCCCEEEECC---chHHHHHhCCC-
Confidence 999999766 688999999999988877653 2478999999999999998 6688999998 78888888888
Q ss_pred ceeEEe
Q 005047 276 VGTLFH 281 (716)
Q Consensus 276 iGT~i~ 281 (716)
.||++.
T Consensus 308 ~GT~i~ 313 (314)
T PRK12353 308 AGTVIV 313 (314)
T ss_pred CCeEec
Confidence 899875
No 147
>TIGR00746 arcC carbamate kinase. The seed alignment for this model includes experimentally confirmed examples from a set of phylogenetically distinct species. In a neighbor-joining tree constructed from an alignment of candidate carbamate kinases and several acetylglutamate kinases, the latter group forms a clear outgroup which roots the tree of carbamate kinase-like proteins. This analysis suggests that in E. coli, the ArcC paralog YqeA may be a second isozyme, while the paralog YahI branches as an outlier and is less likely to be an authentic carbamate kinase. The homolog from Mycoplasma pneumoniae likewise branches outside the set containing known carbamate kinases and also scores below the trusted cutoff.
Probab=99.97 E-value=1.3e-30 Score=273.21 Aligned_cols=243 Identities=22% Similarity=0.328 Sum_probs=186.2
Q ss_pred CeEEEEeCCcccccCCC----cccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhcccCCcccccccccch
Q 005047 15 KRLVVKVGTAVVTRSDG----RLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNEL 90 (716)
Q Consensus 15 ~~iVIKiGGs~l~~~~~----~~~~~~~~~~a~~I~~l~~~G~~vvIVhGGg~~i~~~~~~~~~~~~~~~~~~~~~~~~l 90 (716)
|++|||+||++|.+++. ..+.+++..++++|+.|.+.|+++|||||||+++|...++...... .+.. .
T Consensus 1 ~riViklGgnaL~~~g~~~~~~~~~~~i~~~a~~ia~l~~~g~~vviv~gngpqvG~~~l~~~~~~~----~~~~----~ 72 (310)
T TIGR00746 1 KRVVVALGGNALLQRGEKGSAEAQRDNVRQTAPQIAKLIKRGYELVITHGNGPQVGNLLLQNQAADS----EVPA----M 72 (310)
T ss_pred CeEEEEECHHHhCCCCCCCCcchhHHHHHHHHHHHHHHHHCCCEEEEEECChHHHHHHHhccccccc----cCCC----C
Confidence 68999999999997532 2557889999999999999999999999999999987655322111 1111 1
Q ss_pred hHHHHHHhchHHHHHHHHHHhc----cCCCc------cceEEecCcc--CCchhhH------------------------
Q 005047 91 DGKACAAVGQSSLMALYDTLFS----QLDVT------SSQLLVTDSD--FRDEDFR------------------------ 134 (716)
Q Consensus 91 ~~~~~~a~g~~~~~~~~~~~l~----~~gi~------~~~~~~~~~~--~~~~~~~------------------------ 134 (716)
..+++.+.+|..+..+|+..|. .+|+. ..|++++..| |.++...
T Consensus 73 p~~~~~A~~qg~lg~~~~~~l~~~l~~~g~~~~v~~~vtqv~v~~~D~af~~p~k~ig~~y~~~~a~~~~~~~~~~~~~d 152 (310)
T TIGR00746 73 PLDVLGAMSQGMIGYMLQQALNNELPKRGMEKPVATVLTQTIVDPKDPAFQNPTKPIGPFYTEEEAKRLAAEKGWIVKED 152 (310)
T ss_pred cchHHHHhhHHHHHHHHHHHHHHHHHhcCCCccceEEEEEEEECCCcccccCCCCcCCCCcCHHHHHHHHHHcCCeEeec
Confidence 1247888999888877777776 66643 3466676555 4332221
Q ss_pred ----------------hHHHHHHHHHHhCCC---------eEEeeCCCceecCCCCCCCCCceeecchHHHHHHHhhcCC
Q 005047 135 ----------------KQLYDTVQSLLDLRV---------IPIFNENDAVSTRKAPYEDSSGIFWDNDSLAGLLALELKA 189 (716)
Q Consensus 135 ----------------~~~~~~i~~ll~~g~---------iPV~~g~d~v~~~~~~~~~~g~~~~~sD~~A~~lA~~L~A 189 (716)
.++.+.|+.||+.|. +||+++||.+... ..++|+|++|+++|.+|+|
T Consensus 153 ~~~~~rrvv~sp~p~~iv~~~~I~~LL~~G~iVI~~ggggiPvi~e~~~~~g~--------e~~id~D~lAa~lA~~l~A 224 (310)
T TIGR00746 153 AGRGWRRVVPSPRPKDIVEAETIKTLVENGVIVISSGGGGVPVVLEGAELKGV--------EAVIDKDLASEKLAEEVNA 224 (310)
T ss_pred CCCcceEeecCCCchhhccHHHHHHHHHCCCEEEeCCCCCcCEEecCCeEEee--------EecCCHHHHHHHHHHHhCC
Confidence 145689999999999 4555544433221 0138999999999999999
Q ss_pred CEEEEeecCCccccCCCcccccccccccchhchHHHHhcCCCCCcccCCcHHHHHHHHHHHHcC-CcEEEeeCCCcchHH
Q 005047 190 DLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAG-IPVVITSGFAMDSII 268 (716)
Q Consensus 190 d~Li~~TDVdGVy~~dP~~p~a~~i~~is~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a~~~g-i~v~I~~g~~~~~l~ 268 (716)
|+|+|+|||||||++ |.+|++++|++++.+|+++++.. +.+.+|||.+|+++|..++++| .+++|+| ++.+.
T Consensus 225 D~LIiLTDVdGVy~~-~~~p~a~~i~~it~~e~~~~~~~---g~~~tGgM~~Kl~AA~~~~~~g~~~v~I~~---~~~i~ 297 (310)
T TIGR00746 225 DILVILTDVDAVYIN-YGKPDEKALREVTVEELEDYYKA---GHFAAGSMGPKVEAAIEFVESGGKRAIITS---LENAV 297 (310)
T ss_pred CEEEEEeCCCceeCC-CCCCCCcCCcCcCHHHHHHHHhc---CCcCCCCcHHHHHHHHHHHHhCCCeEEEec---hHHHH
Confidence 999999999999997 45788999999999998877643 3578999999999999988875 5699998 78899
Q ss_pred HHhcCCcceeEEe
Q 005047 269 KVLEGKRVGTLFH 281 (716)
Q Consensus 269 ~~~tg~~iGT~i~ 281 (716)
+++.|+ .||++.
T Consensus 298 ~~l~G~-~GT~I~ 309 (310)
T TIGR00746 298 EALEGK-AGTRVT 309 (310)
T ss_pred HHHCCC-CCcEEe
Confidence 999998 899874
No 148
>cd07080 ALDH_Acyl-CoA-Red_LuxC Acyl-CoA reductase LuxC. Acyl-CoA reductase, LuxC, (EC=1.2.1.50) is the fatty acid reductase enzyme responsible for synthesis of the aldehyde substrate for the luminescent reaction catalyzed by luciferase. The fatty acid reductase, a luminescence-specific, multienzyme complex (LuxCDE), reduces myristic acid to generate the long chain fatty aldehyde required for the luciferase-catalyzed reaction resulting in the emission of blue-green light. Mutational studies of conserved cysteines of LuxC revealed that the cysteine which aligns with the catalytic cysteine conserved throughout the ALDH superfamily is the LuxC acylation site. This CD is composed of mainly bacterial sequences but also includes a few archaeal sequences similar to the Methanospirillum hungateiacyl acyl-CoA reductase RfbN.
Probab=99.97 E-value=1.9e-30 Score=287.43 Aligned_cols=317 Identities=15% Similarity=0.096 Sum_probs=235.0
Q ss_pred hHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHH---HHHHHHHHHHhchhHHHHHHhhcCHHHHHHHH
Q 005047 292 GAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVE---NEADVAAAQEAGYAKSLVSRLALKPGKISSLA 368 (716)
Q Consensus 292 ~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~---~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 368 (716)
-+++.++..+++++.|..-+...|...++++...+..+.+.+..+ +..++.+ ..+...+
T Consensus 25 ~~~~iv~~l~~~~~~~~~~~~~~r~~~l~~l~~~~~~~~~~~~~a~~~l~~~~~r------------------~~l~~~l 86 (422)
T cd07080 25 PVEEIVDFLDRAGKRLLDPDYPLRQQAERLLPTVTGYSEEMLREGLKRLMALFRR------------------ENLERIL 86 (422)
T ss_pred CHHHHHHHHHHHHHHhcCCCchHHHHHHHhhhhccCCCHHHHHHHHHHHHHHcCH------------------HHHHHHH
Confidence 456788888999999999999999999999999999998888776 3222211 1111111
Q ss_pred HHHHHHhcccccccccccccccCCCeEEEEeecceeEEEEEcCC-CchhHHHHHHHHHHhCCEEEEeCCcchHHHHHHHH
Q 005047 369 KSIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILH 447 (716)
Q Consensus 369 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~-~P~~~~~~~~~ALaaGNtvv~Kps~~tp~t~~~l~ 447 (716)
.. .+. ..+ .+..+. +.+...++.++|+|||++|+|| +|.+.++++++||++||++|+|||+.+|.++.+|+
T Consensus 87 ~~--el~-~~~----~Ld~w~-~~~~~~~~~~~P~Gvv~~I~p~N~P~l~~~s~~~aLlaGN~~ilKpS~~~p~~~~~l~ 158 (422)
T cd07080 87 ER--ELG-SPG----ILDEWV-PPGRGGYIRAQPRGLVVHIIAGNVPLLPVWSIVRGLLVKNVNLLKMSSSDPLTATALL 158 (422)
T ss_pred HH--hcC-Ccc----cccCCc-cCCCCCeeEEcCCceEEEEccCCccccHHHHHHHHHHhcCceEEECCCccchHHHHHH
Confidence 11 010 000 011111 1123457789999999999998 59888899999999999999999999999999999
Q ss_pred HHHHHhcccccCc----CceEEec--C-CchHHHhhcCCCCccEEEeecCHHHHHHHHHhcC-CCEEEecCCc-ceEEEc
Q 005047 448 KVITSAIPDTVGE----KLIGLVT--S-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK-IPVLGHADGI-CHVYVD 518 (716)
Q Consensus 448 ~l~~~al~~alP~----gvv~vv~--~-~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a~-~~~~lElGGk-~p~iV~ 518 (716)
+++.+ ++|+ +.++++. | ++++++.|..++ |+|+||||+++|+.|++.+. .+.++|+||| +++|++
T Consensus 159 ~~l~~----~~p~~~~~~~~~vv~~~g~~~~~~~~l~~~~--D~i~~~Gs~~~~~~i~~~a~~~~~~Le~Ggk~s~~vi~ 232 (422)
T cd07080 159 RSLAD----VDPNHPLTDSISVVYWPGGDAELEERILASA--DAVVAWGGEEAVKAIRSLLPPGCRLIDFGPKYSFAVID 232 (422)
T ss_pred HHHHh----cCCCCcccceEEEEEecCCchHHHHHHHHhC--CEEEEeCCHHHHHHHHHhCCCCCeeeecCCceeEEEec
Confidence 99985 5888 8899984 5 444777777776 99999999999999998875 5789999999 556666
Q ss_pred CCC----CHHHHHHHHHHhcCCCCC-ccccccceEEEeCcc---CChhhHHHHHHHHHhcCCEEecCc-cc---------
Q 005047 519 KSA----NLDVAKNIVIDAKIDYPA-ACNAMVETLLVHKDL---ACNGALNELVVELQHEGVGLFGGP-RA--------- 580 (716)
Q Consensus 519 ~dA----Dl~~Aa~~iv~~~f~n~g-~C~a~~~rv~V~~~i---~dd~f~~~l~~~~~~~~~~~~g~~-~~--------- 580 (716)
++| |++++++.+++++|.|+| .|+|+ +++|||+++ + ++|.++|.++++++....-.+. ..
T Consensus 233 ~~a~~~~dl~~aa~~~a~~~~~~~gQ~C~sp-~~v~V~~~~~~~~-~~f~~~l~~~l~~~~~~~p~~~~~~~~~~~~~~~ 310 (422)
T cd07080 233 REALESEKLAEVADALAEDICRYDQQACSSP-QVVFVEKDDDEEL-REFAEALAAALERLPRRYPALSLSAAESAKIARA 310 (422)
T ss_pred HHhhccccHHHHHHHHHHHHHHHhhhhccCC-eEEEEECCCCchH-HHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHH
Confidence 669 999999999999999987 99999 999999999 9 7999999999887632110000 00
Q ss_pred ---------ccc-c-c----C--C-CCccccccccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEccCHHHHHHHHHcc
Q 005047 581 ---------SKL-L-Q----I--P-ETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQV 642 (716)
Q Consensus 581 ---------~~~-~-p----v--~-~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~i~t~d~~~a~~~~~~~ 642 (716)
... . . | . ...+ ..-.++=.+.|.++++++|++..+|. |=-|.++|..+.+. .++++++
T Consensus 311 r~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~r~v~v~~v~~l~~~l~~~~~--~lQTvg~~~~~~~~-~~~~~~l 386 (422)
T cd07080 311 RLEAEFYELKGGVSRDLGWTVIISDEIGL-EASPLNRTVNVKPVASLDDVLRPVTP--YLQTVGLAPSPAEL-AELADAL 386 (422)
T ss_pred HHHHHHHHHhcCCCCCCCeEEEEeCCCCc-cCCCCcCEEEEEEcchHHHHHHhhhh--hcceeEeecChhhH-HHHHHHH
Confidence 000 0 0 1 1 1111 11233447788899999999999985 77899999998887 7777766
Q ss_pred Ccce
Q 005047 643 DSAA 646 (716)
Q Consensus 643 ~~G~ 646 (716)
..-.
T Consensus 387 ~~~G 390 (422)
T cd07080 387 AAAG 390 (422)
T ss_pred HHcC
Confidence 5433
No 149
>cd04237 AAK_NAGS-ABP AAK_NAGS-ABP: N-acetylglutamate (NAG) kinase-like domain of the NAG Synthase (NAGS) of the arginine-biosynthesis pathway (ABP) found in gamma- and beta-proteobacteria and higher plant chloroplasts. Domain architecture of these NAGS consisted of an N-terminal NAG kinase-like (ArgB) domain (this CD) and a C-terminal NAG synthase, acetyltransferase (ArgA) domain. Both bacterial and plant sequences in this CD have a conserved N-terminal extension; a similar sequence in the NAG kinases of the cyclic arginine-biosynthesis pathway has been implicated in feedback inhibition sensing. Plant sequences also have an N-terminal chloroplast transit peptide and an insert (approx. 70 residues) in the C-terminal region of ArgB. Members of this CD belong to the Amino Acid Kinase Superfamily (AAK).
Probab=99.97 E-value=1.8e-30 Score=271.49 Aligned_cols=242 Identities=20% Similarity=0.293 Sum_probs=176.7
Q ss_pred cCeEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhcccCCccc-ccccccchhH
Q 005047 14 VKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLAD-LQKPQNELDG 92 (716)
Q Consensus 14 ~~~iVIKiGGs~l~~~~~~~~~~~~~~~a~~I~~l~~~G~~vvIVhGGg~~i~~~~~~~~~~~~~~~~~-~~~~~~~l~~ 92 (716)
.+++|||+||+++.+++ +.+++++|+.|++.|+++|||||||+++++.+.+ .+.++.+.+ ++.+..+...
T Consensus 18 ~~~~VIKlGG~ai~~~~-------l~~~~~~ia~l~~~g~~~ViVHGggp~i~~~~~~--~gi~~~~~~G~RvT~~~~l~ 88 (280)
T cd04237 18 GKTFVIAFGGEAVAHPN-------FDNIVHDIALLHSLGIRLVLVHGARPQIDQRLAE--RGLEPRYHRGLRITDAAALE 88 (280)
T ss_pred CCEEEEEEChHHhcCch-------HHHHHHHHHHHHHCCCcEEEEeCCCHHHHHHHHH--cCCCccccCCcCcCCHHHHH
Confidence 46899999999998754 7899999999999999999999999999987643 445544443 3443322211
Q ss_pred HHHHHhchHH--HHHHHHHHhccCCCccceEEecCc--------------cCCchhhH-hHHHHHHHHHHhCCCeEEeeC
Q 005047 93 KACAAVGQSS--LMALYDTLFSQLDVTSSQLLVTDS--------------DFRDEDFR-KQLYDTVQSLLDLRVIPIFNE 155 (716)
Q Consensus 93 ~~~~a~g~~~--~~~~~~~~l~~~gi~~~~~~~~~~--------------~~~~~~~~-~~~~~~i~~ll~~g~iPV~~g 155 (716)
....+.|... +...+...+.+.+++...+...+. +++..+.. ..+.+.|+.+|++|++||+.+
T Consensus 89 ~~~~~~g~v~~~l~~~l~~~~~a~~~~~~~~~~~~~~~v~~~~~~~~~~~~~g~~G~v~~v~~~~i~~lL~~g~ipv~~~ 168 (280)
T cd04237 89 CVKEAAGAVRLEIEALLSMGLPNSPMAGARIRVVSGNFVTARPLGVVDGVDFGHTGEVRRIDADAIRRQLDQGSIVLLSP 168 (280)
T ss_pred HHHHHHHHHHHHHHHHHHhhccccCcCCCceEEecCeEEEEEECCcccCceEeeeccEEEEcHHHHHHHHHCCCEEEECC
Confidence 1222233333 222233344444333212211111 11112221 256899999999999999974
Q ss_pred CCceecCCCCCCCCCcee-ecchHHHHHHHhhcCCCEEEEeecCCccccCCCcccccccccccchhchHHHHhcCCCCCc
Q 005047 156 NDAVSTRKAPYEDSSGIF-WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRV 234 (716)
Q Consensus 156 ~d~v~~~~~~~~~~g~~~-~~sD~~A~~lA~~L~Ad~Li~~TDVdGVy~~dP~~p~a~~i~~is~~e~~~~~~~g~~~~~ 234 (716)
.++..+|..+ +|+|.+|.+||.+|+|++|+|+|||||||+++ +++|++|+.+|+++++..+. .
T Consensus 169 --------~g~~~~g~~lnvnaD~~A~~LA~~L~a~klv~ltdv~GV~~~~-----~~~i~~i~~~e~~~l~~~~~---~ 232 (280)
T cd04237 169 --------LGYSPTGEVFNLSMEDVATAVAIALKADKLIFLTDGPGLLDDD-----GELIRELTAQEAEALLETGA---L 232 (280)
T ss_pred --------ceECCCCCEEeeCHHHHHHHHHHHcCCCEEEEEeCCCcccCCC-----CCccccCCHHHHHHHHHcCC---C
Confidence 2233356667 89999999999999999999999999999753 78999999999998887542 3
Q ss_pred ccCCcHHHHHHHHHHHHcCCc-EEEeeCCCcchH-HHHhcCCcceeEE
Q 005047 235 GRGGMTAKVNAAYCAACAGIP-VVITSGFAMDSI-IKVLEGKRVGTLF 280 (716)
Q Consensus 235 ~~ggM~~Kl~aa~~a~~~gi~-v~I~~g~~~~~l-~~~~tg~~iGT~i 280 (716)
.+|||++||++|+.++++|++ |||+|+..|+++ .+.++.+..||.+
T Consensus 233 ~~ggM~~Kv~~a~~a~~~Gv~~v~I~~~~~~~~ll~elft~~g~GT~i 280 (280)
T cd04237 233 LTNDTARLLQAAIEACRGGVPRVHLISYAEDGALLLELFTRDGVGTLI 280 (280)
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHhcCCCCCCcC
Confidence 499999999999999999996 999999999998 7789988899864
No 150
>CHL00202 argB acetylglutamate kinase; Provisional
Probab=99.97 E-value=2.3e-30 Score=271.49 Aligned_cols=242 Identities=19% Similarity=0.264 Sum_probs=177.1
Q ss_pred cCeEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhcccCCccc-ccccc---cc
Q 005047 14 VKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLAD-LQKPQ---NE 89 (716)
Q Consensus 14 ~~~iVIKiGGs~l~~~~~~~~~~~~~~~a~~I~~l~~~G~~vvIVhGGg~~i~~~~~~~~~~~~~~~~~-~~~~~---~~ 89 (716)
.+++|||+||+++.++. ....++++|+.|+..|.++|||||||+++.+.+. + .+.++.+.+ ++.++ ++
T Consensus 23 ~~~~VIk~gG~~~~~~~------l~~~~~~di~~l~~~g~~~VlVHGgg~~i~~~~~-~-~g~~~~~~~G~rvT~~~~l~ 94 (284)
T CHL00202 23 GRIMVIKYGGAAMKNLI------LKADIIKDILFLSCIGLKIVVVHGGGPEINFWLK-Q-LNISPKFWNGIRVTDKVTME 94 (284)
T ss_pred CCeEEEEEChHHhcCcc------hHHHHHHHHHHHHHCCCcEEEEeCCcHHHHHHHH-H-CCCCCEeECCcccCCHHHHH
Confidence 57999999999997654 2458999999999999999999999887776543 2 334444433 33332 11
Q ss_pred hhHHHHHHhchHHHHHHHHHHhccCCCccceEEecC-----------ccCCchhh-HhHHHHHHHHHHhCCCeEEeeCCC
Q 005047 90 LDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTD-----------SDFRDEDF-RKQLYDTVQSLLDLRVIPIFNEND 157 (716)
Q Consensus 90 l~~~~~~a~g~~~~~~~~~~~l~~~gi~~~~~~~~~-----------~~~~~~~~-~~~~~~~i~~ll~~g~iPV~~g~d 157 (716)
..++ ...|... ..+...|...|+++..+...+ .++...+. ...+.+.|+.+|+.|+|||+++
T Consensus 95 ~~~~--~l~g~ln--~~lv~~L~~~Gv~av~l~~~d~~~i~a~~~~~~d~~~~G~i~~v~~~~i~~ll~~g~iPVi~~-- 168 (284)
T CHL00202 95 IVEM--VLAGKVN--KDLVGSINANGGKAVGLCGKDANLIVARASDKKDLGLVGEIQQVDPQLIDMLLEKNYIPVIAS-- 168 (284)
T ss_pred HHHH--HHhhHHH--HHHHHHHHhCCCCeeeeeeccCCEEEEEeCCCcccccceeEEecCHHHHHHHHHCCCEEEECC--
Confidence 1111 1222222 223456666666554332211 12222222 2256799999999999999985
Q ss_pred ceecCCCCCCCCCcee-ecchHHHHHHHhhcCCCEEEEeecCCccccCCCcccccccccccchhchHHHHhcCCCCCccc
Q 005047 158 AVSTRKAPYEDSSGIF-WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGR 236 (716)
Q Consensus 158 ~v~~~~~~~~~~g~~~-~~sD~~A~~lA~~L~Ad~Li~~TDVdGVy~~dP~~p~a~~i~~is~~e~~~~~~~g~~~~~~~ 236 (716)
++++..|..+ +|+|++|+.+|.+|+||+|+|+|||||||+++ .+| +++|++++++|+++++.. .+++
T Consensus 169 ------~~~~~~g~~~ni~~D~~A~~lA~~l~Ad~li~lTdv~Gv~~~~-~d~-~~~i~~i~~~e~~~l~~~----g~~t 236 (284)
T CHL00202 169 ------VAADHDGQTYNINADVVAGEIAAKLNAEKLILLTDTPGILADI-NDP-NSLISTLNIKEARNLAST----GIIS 236 (284)
T ss_pred ------CccCCCCcEEecCHHHHHHHHHHHhCCCEEEEEeCChhhcCCC-CCC-CCccccccHHHHHHHHhc----CCCC
Confidence 1222356666 89999999999999999999999999999853 233 479999999999887653 3789
Q ss_pred CCcHHHHHHHHHHHHcCCc-EEEeeCCCcchH-HHHhcCCcceeEEe
Q 005047 237 GGMTAKVNAAYCAACAGIP-VVITSGFAMDSI-IKVLEGKRVGTLFH 281 (716)
Q Consensus 237 ggM~~Kl~aa~~a~~~gi~-v~I~~g~~~~~l-~~~~tg~~iGT~i~ 281 (716)
|||.+||++|..++++|++ |||+||+.|+++ .++++++..||.+.
T Consensus 237 GGM~~Kl~aa~~a~~~Gv~~v~I~~g~~~~~ll~el~~~~g~GT~i~ 283 (284)
T CHL00202 237 GGMIPKVNCCIRALAQGVEAAHIIDGKEKHALLLEILTEKGIGSMLV 283 (284)
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeCCCCCChHHHHHhcCCCCceEEe
Confidence 9999999999999999998 999999999985 99999999999874
No 151
>PLN02512 acetylglutamate kinase
Probab=99.97 E-value=1.2e-29 Score=268.65 Aligned_cols=245 Identities=21% Similarity=0.262 Sum_probs=177.6
Q ss_pred ccCeEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhcccCCccc-ccccccchh
Q 005047 13 DVKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLAD-LQKPQNELD 91 (716)
Q Consensus 13 ~~~~iVIKiGGs~l~~~~~~~~~~~~~~~a~~I~~l~~~G~~vvIVhGGg~~i~~~~~~~~~~~~~~~~~-~~~~~~~l~ 91 (716)
+++++||||||+++++++ ....++++|+.|+..|.++|||||||+++.... .. .+..+.+.+ ++.++...-
T Consensus 46 ~~~tiVIKlGGs~i~d~~------~~~~~~~di~~l~~~g~~iVlVHGgG~~i~~~~-~~-~gi~~~~~~G~rvT~~~~l 117 (309)
T PLN02512 46 RGKTVVVKYGGAAMKDPE------LKAGVIRDLVLLSCVGLRPVLVHGGGPEINSWL-KK-VGIEPQFKNGLRVTDAETM 117 (309)
T ss_pred CCCeEEEEECCeeccChh------HHHHHHHHHHHHHHCCCCEEEEECCcHHHHHHH-HH-cCCCCcCCCCCcCCCHHHH
Confidence 358999999999998865 246799999999999999999999988666543 22 233333332 333321100
Q ss_pred HHH-HHHhchHHHHHHHHHHhccCCCccceEEecC------c------cCCchhh-HhHHHHHHHHHHhCCCeEEeeCCC
Q 005047 92 GKA-CAAVGQSSLMALYDTLFSQLDVTSSQLLVTD------S------DFRDEDF-RKQLYDTVQSLLDLRVIPIFNEND 157 (716)
Q Consensus 92 ~~~-~~a~g~~~~~~~~~~~l~~~gi~~~~~~~~~------~------~~~~~~~-~~~~~~~i~~ll~~g~iPV~~g~d 157 (716)
... +...|. +...+...|.+.|+++..+.-.+ . ++...+. ...+.+.|+.+|+.|+|||+++ .
T Consensus 118 ei~~~~l~g~--ln~~lv~~L~~~Gv~av~l~g~d~~~i~a~~~~~~~~~~~~G~i~~v~~~~i~~lL~~g~IPVi~~-~ 194 (309)
T PLN02512 118 EVVEMVLVGK--VNKSLVSLINKAGGTAVGLSGKDGRLLRARPSPNSADLGFVGEVTRVDPTVLRPLVDDGHIPVIAT-V 194 (309)
T ss_pred HHHHHHHhhH--HHHHHHHHHHHcCCCeEEeehhhCCEEEEEEcCcCccccccceeeecCHHHHHHHHhCCCEEEEeC-c
Confidence 001 111222 22334567777777655442111 1 2222222 2356799999999999999997 2
Q ss_pred ceecCCCCCCCCCcee-ecchHHHHHHHhhcCCCEEEEeecCCccccCCCcccccccccccchhchHHHHhcCCCCCccc
Q 005047 158 AVSTRKAPYEDSSGIF-WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGR 236 (716)
Q Consensus 158 ~v~~~~~~~~~~g~~~-~~sD~~A~~lA~~L~Ad~Li~~TDVdGVy~~dP~~p~a~~i~~is~~e~~~~~~~g~~~~~~~ 236 (716)
++ +..+..+ +|+|++|++||.+|+||+|+|+|||||||++|| +++++|++|+++|+++++.. .+++
T Consensus 195 ~~-------d~~g~~~~i~~D~~A~~lA~~L~Ad~li~lTdV~GV~~~~~--~~~~lI~~i~~~e~~~l~~~----~~vt 261 (309)
T PLN02512 195 AA-------DEDGQAYNINADTAAGEIAAALGAEKLILLTDVAGVLEDKD--DPGSLVKELDIKGVRKLIAD----GKIA 261 (309)
T ss_pred eE-------CCCCCEeccCHHHHHHHHHHHcCCCEEEEEeCCcceeCCCC--CCcCCCcccCHHHHHHHHhC----CCCC
Confidence 21 1244555 899999999999999999999999999998763 34789999999999887653 3889
Q ss_pred CCcHHHHHHHHHHHHcCCc-EEEeeCCCcchH-HHHhcCCcceeEEe
Q 005047 237 GGMTAKVNAAYCAACAGIP-VVITSGFAMDSI-IKVLEGKRVGTLFH 281 (716)
Q Consensus 237 ggM~~Kl~aa~~a~~~gi~-v~I~~g~~~~~l-~~~~tg~~iGT~i~ 281 (716)
|||.+||++|..++++|++ |||+||..|+++ .++++++..||++.
T Consensus 262 GGM~~Kl~aa~~a~~~Gv~~v~I~~g~~~~~ll~~l~~~~~~GT~I~ 308 (309)
T PLN02512 262 GGMIPKVECCVRSLAQGVKTAHIIDGRVPHSLLLEILTDEGAGTMIT 308 (309)
T ss_pred CcHHHHHHHHHHHHHcCCCEEEEecCCCCChHHHHHhcCCCCeeEEe
Confidence 9999999999999999997 999999999997 67888888999875
No 152
>PRK00942 acetylglutamate kinase; Provisional
Probab=99.97 E-value=1.4e-29 Score=266.47 Aligned_cols=240 Identities=22% Similarity=0.286 Sum_probs=177.8
Q ss_pred cCeEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhcccCCcc-cccccc---cc
Q 005047 14 VKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLA-DLQKPQ---NE 89 (716)
Q Consensus 14 ~~~iVIKiGGs~l~~~~~~~~~~~~~~~a~~I~~l~~~G~~vvIVhGGg~~i~~~~~~~~~~~~~~~~-~~~~~~---~~ 89 (716)
++++||||||+++++++ .+.+++++|+.+++.|.++|||||||+++..... .+ +....+. .+..++ ++
T Consensus 23 ~~~iViK~GGs~l~~~~------~~~~l~~~i~~l~~~g~~vVlVhGgg~~~~~~~~-~~-g~~~~~~~g~~~t~~~~l~ 94 (283)
T PRK00942 23 GKTIVIKYGGNAMTDEE------LKEAFARDIVLLKQVGINPVVVHGGGPQIDELLK-KL-GIESEFVNGLRVTDAETME 94 (283)
T ss_pred CCeEEEEEChHHhcCcc------hHHHHHHHHHHHHHCCCCEEEEeCChHHHHHHHH-HC-CCCcEeeCCEecCCHHHHH
Confidence 57899999999999876 3678999999999999999999999887665442 22 2222221 122221 11
Q ss_pred hhHHHHHHhchHHHHHHHHHHhccCCCccceEE------ecCcc------CCchhh-HhHHHHHHHHHHhCCCeEEeeCC
Q 005047 90 LDGKACAAVGQSSLMALYDTLFSQLDVTSSQLL------VTDSD------FRDEDF-RKQLYDTVQSLLDLRVIPIFNEN 156 (716)
Q Consensus 90 l~~~~~~a~g~~~~~~~~~~~l~~~gi~~~~~~------~~~~~------~~~~~~-~~~~~~~i~~ll~~g~iPV~~g~ 156 (716)
+.. +...|+.. ..+...|..+|+++.++. ++... +...+. ...+.+.++.+|+.|.|||+++
T Consensus 95 ~~~--~a~~G~l~--~~i~~~L~~~Gv~a~~l~~~~~~~~ta~~~~~~~~~~~~g~i~~i~~~~l~~ll~~g~vpVv~~- 169 (283)
T PRK00942 95 VVE--MVLAGKVN--KELVSLINKHGGKAVGLSGKDGGLITAKKLEEDEDLGFVGEVTPVNPALLEALLEAGYIPVISP- 169 (283)
T ss_pred HHH--HHHcCchH--HHHHHHHHhCCCCccceeeccCCEEEEEECCCCCCCccccceEEECHHHHHHHHHCCCEEEEcC-
Confidence 111 11224333 334577778887765443 22221 121121 2245789999999999999985
Q ss_pred CceecCCCCCCCCCcee-ecchHHHHHHHhhcCCCEEEEeecCCccccCCCcccccccccccchhchHHHHhcCCCCCcc
Q 005047 157 DAVSTRKAPYEDSSGIF-WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVG 235 (716)
Q Consensus 157 d~v~~~~~~~~~~g~~~-~~sD~~A~~lA~~L~Ad~Li~~TDVdGVy~~dP~~p~a~~i~~is~~e~~~~~~~g~~~~~~ 235 (716)
+. ++.+|..+ +|+|++|+.||.+|+|++|+|+|||||||+++ +++|++|+++|+.++... .++
T Consensus 170 --~~-----~~~~g~~~~l~~D~~A~~lA~~l~A~~li~~tdv~Gv~~~~-----~~~i~~i~~~e~~~~~~~----~~~ 233 (283)
T PRK00942 170 --IG-----VGEDGETYNINADTAAGAIAAALGAEKLILLTDVPGVLDDK-----GQLISELTASEAEELIED----GVI 233 (283)
T ss_pred --cE-----ECCCCcEEEECHHHHHHHHHHHcCCCEEEEEECCcccccCC-----CcccccCCHHHHHHHHHc----CCC
Confidence 11 22245555 99999999999999999999999999999873 799999999999887653 378
Q ss_pred cCCcHHHHHHHHHHHHcCCc-EEEeeCCCcch-HHHHhcCCcceeEEec
Q 005047 236 RGGMTAKVNAAYCAACAGIP-VVITSGFAMDS-IIKVLEGKRVGTLFHR 282 (716)
Q Consensus 236 ~ggM~~Kl~aa~~a~~~gi~-v~I~~g~~~~~-l~~~~tg~~iGT~i~~ 282 (716)
+|||.+|+++|..++++|+. |+|+|+..|++ |.++++++..||.+.+
T Consensus 234 tggm~~Kl~~a~~~~~~gv~~v~I~~g~~~~~ll~~~~~~~~~GT~i~~ 282 (283)
T PRK00942 234 TGGMIPKVEAALDAARGGVRSVHIIDGRVPHALLLELFTDEGIGTMIVP 282 (283)
T ss_pred CCchHHHHHHHHHHHHhCCCEEEEeCCCCCchHHHHHhcCCCcceEEec
Confidence 99999999999999999986 99999999999 7999999999999875
No 153
>PRK14058 acetylglutamate/acetylaminoadipate kinase; Provisional
Probab=99.97 E-value=1.7e-29 Score=263.32 Aligned_cols=236 Identities=25% Similarity=0.274 Sum_probs=168.9
Q ss_pred eEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhcccCCccc------ccccccc
Q 005047 16 RLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLAD------LQKPQNE 89 (716)
Q Consensus 16 ~iVIKiGGs~l~~~~~~~~~~~~~~~a~~I~~l~~~G~~vvIVhGGg~~i~~~~~~~~~~~~~~~~~------~~~~~~~ 89 (716)
++||||||+++.++ .+++++|+.+++.|.++|||||||+++.+.+ .+ .+.+++|.+ ++.+..+
T Consensus 1 ~~ViK~GG~~l~~~---------~~~~~~i~~l~~~g~~~VlVHGgg~~i~~~~-~~-~gi~~~~~~~~~g~~~rvt~~~ 69 (268)
T PRK14058 1 MIVVKIGGSVGIDP---------EDALIDVASLWADGERVVLVHGGSDEVNELL-ER-LGIEPRFVTSPSGVTSRYTDRE 69 (268)
T ss_pred CEEEEEChHHhhCc---------HHHHHHHHHHHHCCCCEEEEeCCHHHHHHHH-HH-cCCCceEEeCCCCCceEeCCHH
Confidence 68999999999874 2579999999999999999999977666644 33 344444432 2222111
Q ss_pred hhHHHHHHhchHHHHHHHHHHhccCCCccceE------EecC----------------ccCCchhh-HhHHHHHHHHHHh
Q 005047 90 LDGKACAAVGQSSLMALYDTLFSQLDVTSSQL------LVTD----------------SDFRDEDF-RKQLYDTVQSLLD 146 (716)
Q Consensus 90 l~~~~~~a~g~~~~~~~~~~~l~~~gi~~~~~------~~~~----------------~~~~~~~~-~~~~~~~i~~ll~ 146 (716)
--.....++++. ...+...|...|+++..+ +++. -|+...+. ...+.+.|+.+++
T Consensus 70 ~l~~~~~a~~~l--n~~lv~~L~~~Gv~a~~l~~~~~~l~~~~~~~~~~~~~~g~~~~~d~g~~g~v~~v~~~~i~~ll~ 147 (268)
T PRK14058 70 TLEVFIMAMALI--NKQLVERLQSLGVNAVGLSGLDGGLLEGKRKKAVRVVEEGKKKIIRGDYTGKIEEVNTDLLKLLLK 147 (268)
T ss_pred HHHHHHHHHHHH--HHHHHHHHHhCCCCccccCcccCCEEEEEEecccccccCCcceeccCCceeEEEEECHHHHHHHHH
Confidence 011123344422 222234666666554322 1110 01111111 2245789999999
Q ss_pred CCCeEEeeCCCceecCCCCCCCCCcee-ecchHHHHHHHhhcCCCEEEEeecCCccccCCCcccccccccccchhchHHH
Q 005047 147 LRVIPIFNENDAVSTRKAPYEDSSGIF-WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAE 225 (716)
Q Consensus 147 ~g~iPV~~g~d~v~~~~~~~~~~g~~~-~~sD~~A~~lA~~L~Ad~Li~~TDVdGVy~~dP~~p~a~~i~~is~~e~~~~ 225 (716)
+|+|||+++ .++. ..|..+ +|+|++|+++|.+|+||+|+|+|||||||++||. ++++|++|+.+|+.++
T Consensus 148 ~g~iPVi~~-~~~~-------~~g~~~~i~~D~~A~~lA~~l~A~~li~ltdv~Gv~~~~p~--~~~~i~~i~~~e~~~l 217 (268)
T PRK14058 148 AGYLPVVAP-PALS-------EEGEPLNVDGDRAAAAIAGALKAEALVLLSDVPGLLRDPPD--EGSLIERITPEEAEEL 217 (268)
T ss_pred CCCEEEEeC-ceEC-------CCCcEEecCHHHHHHHHHHHcCCCEEEEEeCChhhccCCCC--CCcCccCcCHHHHHHH
Confidence 999999997 2221 145555 9999999999999999999999999999999883 4689999999998875
Q ss_pred HhcCCCCCcccCCcHHHHHHHHHHHHcCCc-EEEeeCCCcchHHHHhcCCcceeEEec
Q 005047 226 ITFGDKSRVGRGGMTAKVNAAYCAACAGIP-VVITSGFAMDSIIKVLEGKRVGTLFHR 282 (716)
Q Consensus 226 ~~~g~~~~~~~ggM~~Kl~aa~~a~~~gi~-v~I~~g~~~~~l~~~~tg~~iGT~i~~ 282 (716)
+. +++|||.+|+++|..++++|++ +||+||..|+++...+.|. ||++..
T Consensus 218 ~~------~~tGgM~~Kl~aa~~a~~~Gv~~v~I~~g~~~~~l~~~l~G~--GT~I~~ 267 (268)
T PRK14058 218 SK------AAGGGMKKKVLMAAEAVEGGVGRVIIADANVDDPISAALAGE--GTVIVN 267 (268)
T ss_pred hh------ccCCccHHHHHHHHHHHHcCCCEEEEEcCCCcchHHHHhCCC--ceEEec
Confidence 43 5799999999999999999995 9999999999998888775 998864
No 154
>cd04250 AAK_NAGK-C AAK_NAGK-C: N-Acetyl-L-glutamate kinase - cyclic (NAGK-C) catalyzes the phosphorylation of the gamma-COOH group of N-acetyl-L-glutamate (NAG) by ATP in the second step of arginine biosynthesis found in some bacteria and photosynthetic organisms using the non-acetylated, cyclic route of ornithine biosynthesis. In this pathway, glutamate is first N-acetylated and then phosphorylated by NAGK to give phosphoryl NAG, which is converted to NAG-ornithine. There are two variants of this pathway. In one, typified by the pathway in Thermotoga maritima and Pseudomonas aeruginosa, the acetyl group is recycled by reversible transacetylation from acetylornithine to glutamate. The phosphorylation of NAG by NAGK is feedback inhibited by arginine. In photosynthetic organisms, NAGK is the target of the nitrogen-signaling protein PII. Hexameric formation of NAGK domains appears to be essential to both arginine inhibition and NAGK-PII complex formation. NAGK-C are members of the Amino A
Probab=99.97 E-value=2e-29 Score=264.66 Aligned_cols=241 Identities=21% Similarity=0.296 Sum_probs=175.3
Q ss_pred cCeEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhcccCCccc-ccccc---cc
Q 005047 14 VKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLAD-LQKPQ---NE 89 (716)
Q Consensus 14 ~~~iVIKiGGs~l~~~~~~~~~~~~~~~a~~I~~l~~~G~~vvIVhGGg~~i~~~~~~~~~~~~~~~~~-~~~~~---~~ 89 (716)
++++||||||+++++++ ...+++++|+.+++.|.++||||||++++.+.+.. + +....+.+ +..++ ++
T Consensus 14 ~~~~ViKlGGs~i~~~~------~~~~~~~~i~~l~~~g~~~ViVhG~g~~~~~~l~~-~-g~~~~~~~g~r~t~~~~~~ 85 (279)
T cd04250 14 GKTVVIKYGGNAMKDEE------LKESFARDIVLLKYVGINPVVVHGGGPEINEMLKK-L-GIESEFVNGLRVTDEETME 85 (279)
T ss_pred CCEEEEEEChHHhcCcc------HHHHHHHHHHHHHHCCCCEEEEcCCcHHHHHHHHH-C-CCCCEeECCeecCCHHHHH
Confidence 57999999999998875 35789999999999999999999998876654432 2 22222221 22222 11
Q ss_pred hhHHHHHHhchHHHHHHHHHHhccCCCccceEE------ecCcc-----------CCchhh-HhHHHHHHHHHHhCCCeE
Q 005047 90 LDGKACAAVGQSSLMALYDTLFSQLDVTSSQLL------VTDSD-----------FRDEDF-RKQLYDTVQSLLDLRVIP 151 (716)
Q Consensus 90 l~~~~~~a~g~~~~~~~~~~~l~~~gi~~~~~~------~~~~~-----------~~~~~~-~~~~~~~i~~ll~~g~iP 151 (716)
+..++ ..|. +...+...|.+.|+++..+. ++.+. +...+. ...+.+.++.+|+.|.||
T Consensus 86 ~~~~~--~~g~--ln~~l~~~L~~~Gv~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~i~~~~i~~ll~~g~IP 161 (279)
T cd04250 86 IVEMV--LVGK--VNKEIVSLINRAGGKAVGLSGKDGNLIKAKKKDATVIEEIIDLGFVGEVTEVNPELLETLLEAGYIP 161 (279)
T ss_pred HHHHH--HcCc--hHHHHHHHHHHcCCCcceeecCCCCEEEEEECcccccCCCcccCcccceEEEcHHHHHHHHHCCCeE
Confidence 11111 1143 23334567777776654332 22111 111111 224678999999999999
Q ss_pred EeeCCCceecCCCCCCCCCcee-ecchHHHHHHHhhcCCCEEEEeecCCccccCCCcccccccccccchhchHHHHhcCC
Q 005047 152 IFNENDAVSTRKAPYEDSSGIF-WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGD 230 (716)
Q Consensus 152 V~~g~d~v~~~~~~~~~~g~~~-~~sD~~A~~lA~~L~Ad~Li~~TDVdGVy~~dP~~p~a~~i~~is~~e~~~~~~~g~ 230 (716)
|+++ +. .+..+..+ +|+|++|+++|.+|+|++|+|+|||||||++||+ ++++|++++++|+.+++..
T Consensus 162 Vi~~---~~-----~~~~g~~~~~~~D~~A~~lA~~l~A~~li~ltdv~Gv~~~~p~--~~~~i~~i~~~e~~~l~~~-- 229 (279)
T cd04250 162 VIAP---VG-----VGEDGETYNINADTAAGAIAAALKAEKLILLTDVAGVLDDPND--PGSLISEISLKEAEELIAD-- 229 (279)
T ss_pred EEcC---Cc-----cCCCCcEEEeCHHHHHHHHHHHhCCCEEEEEECCcccccCCCC--CccccccCCHHHHHHHHHc--
Confidence 9985 11 12244555 8999999999999999999999999999999883 3789999999999887653
Q ss_pred CCCcccCCcHHHHHHHHHHHHcCCc-EEEeeCCCcchH-HHHhcCCcceeEE
Q 005047 231 KSRVGRGGMTAKVNAAYCAACAGIP-VVITSGFAMDSI-IKVLEGKRVGTLF 280 (716)
Q Consensus 231 ~~~~~~ggM~~Kl~aa~~a~~~gi~-v~I~~g~~~~~l-~~~~tg~~iGT~i 280 (716)
.+++|||.+|+++|..++++|++ |+|+||..|+++ .++++++..||++
T Consensus 230 --~~~tGgm~~Kl~~a~~a~~~g~~~v~I~~g~~~~~ll~~~~~~~~~GT~i 279 (279)
T cd04250 230 --GIISGGMIPKVEACIEALEGGVKAAHIIDGRVPHSLLLEIFTDEGIGTMI 279 (279)
T ss_pred --CCCCCchHHHHHHHHHHHHhCCCEEEEeCCCCCchHHHHHhcCCCCccCC
Confidence 37899999999999999999997 999999999986 8889988889864
No 155
>PRK12352 putative carbamate kinase; Reviewed
Probab=99.96 E-value=1.5e-28 Score=257.99 Aligned_cols=258 Identities=18% Similarity=0.221 Sum_probs=182.4
Q ss_pred ccCeEEEEeCCcccccCCCc--c--cHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhcccCCccccccccc
Q 005047 13 DVKRLVVKVGTAVVTRSDGR--L--ALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQN 88 (716)
Q Consensus 13 ~~~~iVIKiGGs~l~~~~~~--~--~~~~~~~~a~~I~~l~~~G~~vvIVhGGg~~i~~~~~~~~~~~~~~~~~~~~~~~ 88 (716)
|.|++||||||+++.+++.. . +.+++..++++|+.|+..|+++|||||||+|++..+.+ .+..+.|..++.+..
T Consensus 1 m~k~iVI~lGGnAl~~~~~~~~~~~~~~~~~~~a~dia~l~~~G~~lVivHG~GPqI~~~l~~--~~~~~~~~g~rvt~~ 78 (316)
T PRK12352 1 MKELVVVAIGGNSIIKDNASQSIEHQAEAVKAVADTVLEMLASDYDIVLTHGNGPQVGLDLRR--AEIAHEREGLPLTPL 78 (316)
T ss_pred CCcEEEEEEChHHhcCCCCCcchhhHHHHHHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHH--cCcccccCCCCCCCH
Confidence 34799999999999765432 2 23678999999999999999999999999999997754 344444533444332
Q ss_pred chhHHHHHHhchHH--HHHHHHHHhccCCCcc-----ceEEec--CccCC------------------------------
Q 005047 89 ELDGKACAAVGQSS--LMALYDTLFSQLDVTS-----SQLLVT--DSDFR------------------------------ 129 (716)
Q Consensus 89 ~l~~~~~~a~g~~~--~~~~~~~~l~~~gi~~-----~~~~~~--~~~~~------------------------------ 129 (716)
. .....+.|..+ +...+.+.|...|... .++.++ ++.|.
T Consensus 79 ~--~~v~~~~g~i~~~i~~~L~~~l~~~g~~~~~~vvt~v~vs~~D~~f~~~~kpiG~~y~~~~a~~~~~~~~~~~~~~d 156 (316)
T PRK12352 79 A--NCVADTQGGIGYLIQQALNNRLARHGEKKAVTVVTQVEVDKNDPGFAHPTKPIGAFFSESQRDELQKANPDWRFVED 156 (316)
T ss_pred H--HHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEECCCCccccCCcccccCcccHHHHHHHhhhcCCceEeec
Confidence 2 22333443322 2344556776666221 012122 12221
Q ss_pred -chhh----------HhHHHHHHHHHHhCCCeEEeeCCCceecC-CCCCCCCCcee-ecchHHHHHHHhhcCCCEEEEee
Q 005047 130 -DEDF----------RKQLYDTVQSLLDLRVIPIFNENDAVSTR-KAPYEDSSGIF-WDNDSLAGLLALELKADLLVLLS 196 (716)
Q Consensus 130 -~~~~----------~~~~~~~i~~ll~~g~iPV~~g~d~v~~~-~~~~~~~g~~~-~~sD~~A~~lA~~L~Ad~Li~~T 196 (716)
.+++ ..++.+.|+.||++|+|+|.+|...+... ...+...+..+ +|+|.+|+.+|.+|+||+|+|+|
T Consensus 157 ~g~G~rrvv~sp~pv~~V~~~~I~~ll~~g~iVi~~ggggiPv~~~~~g~~~n~~~nInaD~aAa~iA~aL~AdkLI~LT 236 (316)
T PRK12352 157 AGRGYRRVVASPEPKRIVEAPAIKALIQQGFVVIGAGGGGIPVVRTDAGDYQSVDAVIDKDLSTALLAREIHADILVITT 236 (316)
T ss_pred CCCCeEEecCCCCCceEEcHHHHHHHHHCCCEEEecCCCCCCEEeCCCCCccCceeeecHHHHHHHHHHHhCCCEEEEEe
Confidence 1111 22578999999999999666543332221 01111123345 99999999999999999999999
Q ss_pred cCCccccCCCcccccccccccchhchHHHHhcCCCCCcccCCcHHHHHHHHHHHHcCCc-EEEeeCCCcchHHHHhcCCc
Q 005047 197 DVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIP-VVITSGFAMDSIIKVLEGKR 275 (716)
Q Consensus 197 DVdGVy~~dP~~p~a~~i~~is~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a~~~gi~-v~I~~g~~~~~l~~~~tg~~ 275 (716)
||+|||.++| +|++++|++++.+|+++++..+ ....|||.||+++|+.+++.|+. |||+| ++.+.++++|+
T Consensus 237 DV~GV~~d~~-~~~~~li~~lt~~e~~~li~~g---~i~~GgM~pKl~aA~~al~~Gv~~v~I~~---~~~i~~al~g~- 308 (316)
T PRK12352 237 GVEKVCIHFG-KPQQQALDRVDIATMTRYMQEG---HFPPGSMLPKIIASLTFLEQGGKEVIITT---PECLPAALRGE- 308 (316)
T ss_pred CchhhccCCC-CCCcccccccCHHHHHHHHhcC---CcCCCCCHHHHHHHHHHHHhCCCeEEEcc---hHHHHHHHcCC-
Confidence 9999998865 5778899999999999887654 24479999999999999999987 99997 78899999998
Q ss_pred ceeEEec
Q 005047 276 VGTLFHR 282 (716)
Q Consensus 276 iGT~i~~ 282 (716)
.||.+..
T Consensus 309 ~GT~I~~ 315 (316)
T PRK12352 309 TGTHIIK 315 (316)
T ss_pred CCeEEEe
Confidence 8898764
No 156
>PRK05279 N-acetylglutamate synthase; Validated
Probab=99.96 E-value=7.8e-29 Score=277.00 Aligned_cols=247 Identities=17% Similarity=0.231 Sum_probs=177.3
Q ss_pred cCeEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhcccCCccc-ccccccchhH
Q 005047 14 VKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLAD-LQKPQNELDG 92 (716)
Q Consensus 14 ~~~iVIKiGGs~l~~~~~~~~~~~~~~~a~~I~~l~~~G~~vvIVhGGg~~i~~~~~~~~~~~~~~~~~-~~~~~~~l~~ 92 (716)
.+++|||+||+++.+++ +.+++++|+.|++.|.++|||||||++++..+.+ .+..+.+.+ ++.+..+...
T Consensus 25 ~~~~VIk~GG~~l~~~~-------~~~~~~~i~~l~~~g~~~VlVHGgg~~i~~~~~~--~g~~~~~~~G~RvT~~~~l~ 95 (441)
T PRK05279 25 GKTFVIMLGGEAIAHGN-------FSNIVHDIALLHSLGIRLVLVHGARPQIEEQLAA--RGIEPRYHKGLRVTDAAALE 95 (441)
T ss_pred CCEEEEEECchhccChh-------HHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHH--cCCCceecCCcccCCHHHHH
Confidence 46899999999998765 6799999999999999999999999999987643 444444443 4444322211
Q ss_pred HHHHHhchHHH--HHHHHHHhccCCCccceEEecCc--------------cCCchhhH-hHHHHHHHHHHhCCCeEEeeC
Q 005047 93 KACAAVGQSSL--MALYDTLFSQLDVTSSQLLVTDS--------------DFRDEDFR-KQLYDTVQSLLDLRVIPIFNE 155 (716)
Q Consensus 93 ~~~~a~g~~~~--~~~~~~~l~~~gi~~~~~~~~~~--------------~~~~~~~~-~~~~~~i~~ll~~g~iPV~~g 155 (716)
-...++|+... ..++...+.+.|++...+...++ +++..+.+ .++.+.|+.+|++|+|||+.+
T Consensus 96 ~~~~~~g~v~~~l~~~l~~g~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~v~~v~~~~i~~ll~~g~ipV~~~ 175 (441)
T PRK05279 96 CVKQAAGELRLDIEARLSMGLPNTPMAGAHIRVVSGNFVTARPLGVDDGVDYQHTGEVRRIDAEAIRRQLDSGAIVLLSP 175 (441)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCCcccCCcceEeeccEEEEEECCCCCCccccceeeEEEEeHHHHHHHHHCCCeEEECC
Confidence 12222343332 22222233333332211221111 22212221 246899999999999999963
Q ss_pred CCceecCCCCCCCCCcee-ecchHHHHHHHhhcCCCEEEEeecCCccccCCCcccccccccccchhchHHHHhcCCCCCc
Q 005047 156 NDAVSTRKAPYEDSSGIF-WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRV 234 (716)
Q Consensus 156 ~d~v~~~~~~~~~~g~~~-~~sD~~A~~lA~~L~Ad~Li~~TDVdGVy~~dP~~p~a~~i~~is~~e~~~~~~~g~~~~~ 234 (716)
.+++..|..+ +|+|++|+.||.+|+|++|+|+|||||||+++ +++|++|+.+++++++..- .+.+
T Consensus 176 --------i~~~~~g~~~ni~~D~~a~~lA~~l~a~~lv~ltdv~GV~~~~-----~~~i~~i~~~~~~~~~~~~-~~~~ 241 (441)
T PRK05279 176 --------LGYSPTGESFNLTMEEVATQVAIALKADKLIFFTESQGVLDED-----GELIRELSPNEAQALLEAL-EDGD 241 (441)
T ss_pred --------ceECCCCCEEEECHHHHHHHHHHHcCCCEEEEEECCCCccCCC-----CchhhhCCHHHHHHHHhhh-hcCC
Confidence 1222355556 99999999999999999999999999999653 7899999999998776511 1247
Q ss_pred ccCCcHHHHHHHHHHHHcCCc-EEEeeCCCcchH-HHHhcCCcceeEEecC
Q 005047 235 GRGGMTAKVNAAYCAACAGIP-VVITSGFAMDSI-IKVLEGKRVGTLFHRD 283 (716)
Q Consensus 235 ~~ggM~~Kl~aa~~a~~~gi~-v~I~~g~~~~~l-~~~~tg~~iGT~i~~~ 283 (716)
++|||.+||++|+.++++|++ |||+|+..|+++ .++++.+..||.+..+
T Consensus 242 ~~ggM~~Kv~~a~~~~~~gv~~v~i~~~~~~~~l~~~l~~~~g~GT~i~~~ 292 (441)
T PRK05279 242 YNSGTARFLRAAVKACRGGVRRSHLISYAEDGALLQELFTRDGIGTMIVME 292 (441)
T ss_pred CCccHHHHHHHHHHHHHcCCCEEEEecCCCCcHHHHHHhcCCCCceEEecC
Confidence 799999999999999999996 999999999999 5577777899999876
No 157
>PRK12686 carbamate kinase; Reviewed
Probab=99.96 E-value=1.5e-28 Score=255.91 Aligned_cols=256 Identities=22% Similarity=0.302 Sum_probs=179.8
Q ss_pred ccCeEEEEeCCcccccCCC--cccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhcccCCcccccccccch
Q 005047 13 DVKRLVVKVGTAVVTRSDG--RLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNEL 90 (716)
Q Consensus 13 ~~~~iVIKiGGs~l~~~~~--~~~~~~~~~~a~~I~~l~~~G~~vvIVhGGg~~i~~~~~~~~~~~~~~~~~~~~~~~~l 90 (716)
|++++|||+||+++.+++. +.+.++++.++++|+.|.+.|+++||+||+|||+|..++++... .+.+ ...+.|
T Consensus 1 ~~~~iVialGGnAl~~~~~~~~~q~~~~~~~a~~ia~l~~~g~~~vi~HGnGPQVg~~~~~~~~~-~~~~----~~~~pl 75 (312)
T PRK12686 1 MKEKIVIALGGNAILQTEATAEAQQTAVREAAQHLVDLIEAGHDIVITHGNGPQVGNLLLQQAES-NSNK----VPAMPL 75 (312)
T ss_pred CCCEEEEEcChHhhCCCCCChHHHHHHHHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHhc-cccC----CCCCCh
Confidence 4679999999999987553 34456889999999999999999999999999999765543221 1111 122334
Q ss_pred hHHHHHHhchHHHH--HHHHHHhccCCCc--c----ceEEecCcc--CC------------------------------c
Q 005047 91 DGKACAAVGQSSLM--ALYDTLFSQLDVT--S----SQLLVTDSD--FR------------------------------D 130 (716)
Q Consensus 91 ~~~~~~a~g~~~~~--~~~~~~l~~~gi~--~----~~~~~~~~~--~~------------------------------~ 130 (716)
+-..+.+.|..+.+ ..+.+.|...++. + .|+++..+| |. .
T Consensus 76 ~~~~a~sqg~iGy~~~q~l~~~l~~r~~~~~v~~vvtqv~Vd~~d~af~~ptk~ig~~~~~~~a~~~~~~~g~~~~~d~~ 155 (312)
T PRK12686 76 DTCVAMSQGMIGYWLQNALNNELTERGIDKPVITLVTQVEVDKDDPAFANPTKPIGPFYTEEEAKQQAEQPGSTFKEDAG 155 (312)
T ss_pred hhhhhhccchhhHHHHHHHHHHHHhcCCCCCceEEEEEEEECCCChhhcCCCCCccCccCHHHHHHHHHHcCCcccccCC
Confidence 33455566666643 3345666555432 1 122222111 00 1
Q ss_pred hhhHh----------HHHHHHHHHHhCCCeEEeeCCCceecCCCCCCCCCce-eecchHHHHHHHhhcCCCEEEEeecCC
Q 005047 131 EDFRK----------QLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGI-FWDNDSLAGLLALELKADLLVLLSDVE 199 (716)
Q Consensus 131 ~~~~~----------~~~~~i~~ll~~g~iPV~~g~d~v~~~~~~~~~~g~~-~~~sD~~A~~lA~~L~Ad~Li~~TDVd 199 (716)
+++++ ++.+.|+.||+.|+|||.+|...+....-.....+.. ++|+|++|++||.+|+||+|+|+||||
T Consensus 156 ~G~rrvV~sP~P~~ive~~~I~~Ll~~G~IpI~~GgggIPVv~~~~~~~gv~avid~D~~Aa~LA~~L~Ad~LIiLTDVd 235 (312)
T PRK12686 156 RGYRRVVPSPKPQEIIEHDTIRTLVDGGNIVIACGGGGIPVIRDDNTLKGVEAVIDKDFASEKLAEQIDADLLIILTGVE 235 (312)
T ss_pred CCeEEeeCCCCCccccCHHHHHHHHHCCCEEEEeCCCCCCeEecCCcEEeeecccCccHHHHHHHHHcCCCEEEEEeCch
Confidence 12222 4578999999999999988732221110000001222 489999999999999999999999999
Q ss_pred ccccCCCcccccccccccchhchHHHHhcCCCCCcccCCcHHHHHHHHHHHHc--CCcEEEeeCCCcchHHHHhcCCcce
Q 005047 200 GLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACA--GIPVVITSGFAMDSIIKVLEGKRVG 277 (716)
Q Consensus 200 GVy~~dP~~p~a~~i~~is~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a~~~--gi~v~I~~g~~~~~l~~~~tg~~iG 277 (716)
|||++ |.+|++++|++++.+|+++++..+ .+.+|||.||+++|..+++. |.+++|++ ++.+.+++.|+ .|
T Consensus 236 GVy~~-~~~p~ak~I~~I~~~e~~~li~~g---~~~tGGM~pKveAA~~av~~g~g~~viI~~---~~~i~~aL~G~-~G 307 (312)
T PRK12686 236 NVFIN-FNKPNQQKLDDITVAEAKQYIAEG---QFAPGSMLPKVEAAIDFVESGEGKKAIITS---LEQAKEALAGN-AG 307 (312)
T ss_pred hhccC-CCCCCCeECCccCHHHHHHHhhCC---CccCCCcHHHHHHHHHHHHhCCCCEEEEeC---chHHHHHhCCC-CC
Confidence 99996 557889999999999998877653 47789999999999999976 45688987 67888888887 79
Q ss_pred eEEe
Q 005047 278 TLFH 281 (716)
Q Consensus 278 T~i~ 281 (716)
|++.
T Consensus 308 T~I~ 311 (312)
T PRK12686 308 THIT 311 (312)
T ss_pred eEEe
Confidence 9874
No 158
>cd02115 AAK Amino Acid Kinases (AAK) superfamily, catalytic domain; present in such enzymes like N-acetylglutamate kinase (NAGK), carbamate kinase (CK), aspartokinase (AK), glutamate-5-kinase (G5K) and UMP kinase (UMPK). The AAK superfamily includes kinases that phosphorylate a variety of amino acid substrates. These kinases catalyze the formation of phosphoric anhydrides, generally with a carboxylate, and use ATP as the source of the phosphoryl group; are involved in amino acid biosynthesis. Some of these kinases control the process via allosteric feed-back inhibition.
Probab=99.96 E-value=2.7e-29 Score=260.05 Aligned_cols=239 Identities=28% Similarity=0.339 Sum_probs=181.6
Q ss_pred EEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhcccCCcc-cccccccchhHHHHH
Q 005047 18 VVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLA-DLQKPQNELDGKACA 96 (716)
Q Consensus 18 VIKiGGs~l~~~~~~~~~~~~~~~a~~I~~l~~~G~~vvIVhGGg~~i~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~ 96 (716)
|||||||+++++ +.+.+++++|+.+++.|+++||||||++++++.+.... ....+. ..... ......+.
T Consensus 1 ViKiGGs~l~~~------~~~~~~~~~i~~l~~~~~~~viV~ggg~~~~~~~~~~~--~~~~~~~~~~~~--~~~~~~~~ 70 (248)
T cd02115 1 VIKFGGSSVSSE------ERLRNLARILVKLASEGGRVVVVHGAGPQITDELLAHG--ELLGYARGLRIT--DRETDALA 70 (248)
T ss_pred CEeeCccccCCH------HHHHHHHHHHHHHHhcCCCEEEEECCCCCcCHHHHHHH--HhhhhhhccCCC--HHHHHHHH
Confidence 799999999874 35899999999999889999999999998887654321 111111 01110 01124566
Q ss_pred HhchHHHHHHHHHHhccCCCccceEEec-----CccCCchhh-HhHHHHHHHHHHhCCCeEEeeCCCceecCCCCCCCCC
Q 005047 97 AVGQSSLMALYDTLFSQLDVTSSQLLVT-----DSDFRDEDF-RKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSS 170 (716)
Q Consensus 97 a~g~~~~~~~~~~~l~~~gi~~~~~~~~-----~~~~~~~~~-~~~~~~~i~~ll~~g~iPV~~g~d~v~~~~~~~~~~g 170 (716)
+.|+..+..++...|.+.|+++..+... +.++...+. .....+.|+++|+.|.|||++|+..... . ..+
T Consensus 71 ~~~~~~~~~~~~~~l~~~gi~a~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~l~~~~ipVv~g~~~~~~----~-~~~ 145 (248)
T cd02115 71 AMGEGMSNLLIAAALEQHGIKAVPLDLTQAGFASPNQGHVGKITKVSTDRLKSLLENGILPILSGFGGTDE----K-ETG 145 (248)
T ss_pred HHHHHHHHHHHHHHHHhCCCCeEEEchHHcCeEeCCCCCcccceeeCHHHHHHHHhCCcEEEecCeEeccC----C-cee
Confidence 7777777778889999999887655322 222221122 2245688999999999999998332221 0 012
Q ss_pred ce-eecchHHHHHHHhhcCCCEEEEeecCCccccCCC-cccccccccccchhchHHHHhcCCCCCcccCCcHHHHHHHHH
Q 005047 171 GI-FWDNDSLAGLLALELKADLLVLLSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYC 248 (716)
Q Consensus 171 ~~-~~~sD~~A~~lA~~L~Ad~Li~~TDVdGVy~~dP-~~p~a~~i~~is~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~ 248 (716)
.. .+++|++|+.+|.+|+|++|+|+|||||||++|| .+|++++|++|+++|+.++.. .|+|..|++++..
T Consensus 146 ~~~~~~sD~~A~~lA~~l~A~~li~~tdV~Gv~~~dP~~~~~a~~i~~i~~~e~~~l~~--------~g~~~~k~~a~~~ 217 (248)
T cd02115 146 TLGRGGSDSTAALLAAALKADRLVILTDVDGVYTADPRKVPDAKLLSELTYEEAAELAY--------AGAMVLKPKAADP 217 (248)
T ss_pred eecCCCHHHHHHHHHHHcCCCEEEEEecCCeeecCCCCcCCcCeECCcCCHHHHHHHHH--------cCCCccCHHHHHH
Confidence 22 3999999999999999999999999999999999 588999999999999987654 4679999999999
Q ss_pred HHHcCCcEEEeeCCCcchHHHHhcCCcceeEE
Q 005047 249 AACAGIPVVITSGFAMDSIIKVLEGKRVGTLF 280 (716)
Q Consensus 249 a~~~gi~v~I~~g~~~~~l~~~~tg~~iGT~i 280 (716)
+.++|++++|+|+..|+++ ++++++..||++
T Consensus 218 ~~~~~~~v~I~~~~~~~~l-~~~~~~~~GT~I 248 (248)
T cd02115 218 AARAGIPVRIANTENPGAL-ALFTPDGGGTLI 248 (248)
T ss_pred HHHcCCcEEEEeCCCcccc-cccCCCCCCCCC
Confidence 9999999999999999999 999988889864
No 159
>PRK12454 carbamate kinase-like carbamoyl phosphate synthetase; Reviewed
Probab=99.96 E-value=6.7e-28 Score=250.41 Aligned_cols=256 Identities=23% Similarity=0.333 Sum_probs=181.6
Q ss_pred ccCeEEEEeCCcccccCCCcc----cHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhcccCCccccccccc
Q 005047 13 DVKRLVVKVGTAVVTRSDGRL----ALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQN 88 (716)
Q Consensus 13 ~~~~iVIKiGGs~l~~~~~~~----~~~~~~~~a~~I~~l~~~G~~vvIVhGGg~~i~~~~~~~~~~~~~~~~~~~~~~~ 88 (716)
|++++||+|||++|...+... +++++...+++|+.+.+.|++++|+||+|+|+|...++...... .....+
T Consensus 1 ~~~~ivvalgGnAl~~~~~~~~~~~q~~~v~~~a~~i~~~~~~g~~vvi~hGnGpQVG~i~~~~~~~~~-----~~~~~~ 75 (313)
T PRK12454 1 MKKRIVIALGGNALLQPGEKGTAENQMKNVRKTAKQIADLIEEGYEVVITHGNGPQVGNLLLQMDAAKD-----VGIPPF 75 (313)
T ss_pred CCceEEEEeChHHhCCCCCCCcchHHHHHHHHHHHHHHHHHHcCCEEEEEECCChHHHHHHHHHHHhcc-----cCCCCC
Confidence 357999999999998755422 23589999999999999999999999999999987655322111 011223
Q ss_pred chhHHHHHHhchHHHH--HHHHHHhccCCCccc------eEEecCcc--CC----------ch-----------------
Q 005047 89 ELDGKACAAVGQSSLM--ALYDTLFSQLDVTSS------QLLVTDSD--FR----------DE----------------- 131 (716)
Q Consensus 89 ~l~~~~~~a~g~~~~~--~~~~~~l~~~gi~~~------~~~~~~~~--~~----------~~----------------- 131 (716)
.|+...+.+.|..+.+ ..+.+.|...|+... |+.+...| |. +.
T Consensus 76 pld~~~a~sqG~igy~l~~al~~~l~~~g~~~~v~t~~tq~~Vd~~Dpaf~~PtKpiG~~y~~~~a~~~~~~~g~~~~~d 155 (313)
T PRK12454 76 PLDVAGAMTQGWIGYMIQQALRNELAKRGIEKQVATIVTQVIVDKNDPAFQNPTKPVGPFYDEEEAKKLAKEKGWIVKED 155 (313)
T ss_pred ccchhhhhhhHHHHHHHHHHHHHHHHhcCCCCceEEEEEEEEECCCCccccCCCCCcCCCcCHHHHHHHHHHcCCEEEEc
Confidence 3434445555555533 345677777776431 22232211 11 11
Q ss_pred ---hhHh----------HHHHHHHHHHhCCCeEEeeCCCceecCCCCCCCCCce-eecchHHHHHHHhhcCCCEEEEeec
Q 005047 132 ---DFRK----------QLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGI-FWDNDSLAGLLALELKADLLVLLSD 197 (716)
Q Consensus 132 ---~~~~----------~~~~~i~~ll~~g~iPV~~g~d~v~~~~~~~~~~g~~-~~~sD~~A~~lA~~L~Ad~Li~~TD 197 (716)
++++ ++.+.|+.||++|.|||++|...+......+...+.. ++|+|.+|++||.+|+||+|+|+||
T Consensus 156 ~g~g~RrvV~SP~P~~ive~~aI~~LLe~G~IvI~~GgGGiPV~~~~g~~~gveaViD~D~aAa~LA~~L~AD~LIiLTd 235 (313)
T PRK12454 156 AGRGWRRVVPSPDPLGIVEIEVIKALVENGFIVIASGGGGIPVIEEDGELKGVEAVIDKDLASELLAEELNADIFIILTD 235 (313)
T ss_pred CCCceEEEeCCCCCccccCHHHHHHHHHCCCEEEEeCCCccceEcCCCcEEeeeeecCccHHHHHHHHHcCCCEEEEEeC
Confidence 1111 3378999999999999999843222211001001111 3789999999999999999999999
Q ss_pred CCccccCCCcccccccccccchhchHHHHhcCCCCCcccCCcHHHHHHHHHHHHcCC-cEEEeeCCCcchHHHHhcCCcc
Q 005047 198 VEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGI-PVVITSGFAMDSIIKVLEGKRV 276 (716)
Q Consensus 198 VdGVy~~dP~~p~a~~i~~is~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a~~~gi-~v~I~~g~~~~~l~~~~tg~~i 276 (716)
|||||++ |.+|++++|++|+.+|+.+++..+ .+.+|||.+|+++|+.+++.|. +++|++ ++.+.+++.|+ .
T Consensus 236 VdGVy~~-~~~p~~~~i~~It~~e~~~~i~~g---~~~~GgM~pKv~AA~~~v~~gg~~a~I~~---~~~i~~aL~G~-~ 307 (313)
T PRK12454 236 VEKVYLN-YGKPDQKPLDKVTVEEAKKYYEEG---HFKAGSMGPKILAAIRFVENGGKRAIIAS---LEKAVEALEGK-T 307 (313)
T ss_pred CceeeCC-CCCCCCeEccccCHHHHHHHHhcC---CcCCCChHHHHHHHHHHHHcCCCeEEECc---hHHHHHHHCCC-C
Confidence 9999987 457889999999999998877643 4678999999999999998875 599986 67888888887 7
Q ss_pred eeEEe
Q 005047 277 GTLFH 281 (716)
Q Consensus 277 GT~i~ 281 (716)
||++.
T Consensus 308 GT~I~ 312 (313)
T PRK12454 308 GTRII 312 (313)
T ss_pred CeEeC
Confidence 99875
No 160
>PRK00358 pyrH uridylate kinase; Provisional
Probab=99.96 E-value=7.8e-28 Score=246.07 Aligned_cols=228 Identities=19% Similarity=0.276 Sum_probs=165.4
Q ss_pred CeEEEEeCCcccccCCC-cccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhcccCCcccccccccchhHH
Q 005047 15 KRLVVKVGTAVVTRSDG-RLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGK 93 (716)
Q Consensus 15 ~~iVIKiGGs~l~~~~~-~~~~~~~~~~a~~I~~l~~~G~~vvIVhGGg~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 93 (716)
+++|||||||+++++++ +++.+.+.+++++|+.+++.|+++|||||||. +.+.......+ + ... .+.
T Consensus 1 ~~iViK~GGs~l~~~~~~~~~~~~i~~~~~~i~~~~~~g~~vvlV~gGG~-~a~~~~~~~~~----~---~~~--~~~-- 68 (231)
T PRK00358 1 KRVLLKLSGEALAGEKGFGIDPEVLDRIAEEIKEVVELGVEVAIVVGGGN-IFRGYIGAAAG----M---DRA--TAD-- 68 (231)
T ss_pred CeEEEEeccceecCCCCCCCCHHHHHHHHHHHHHHHHCCCeEEEEECCCH-HHHHHHHhhcC----C---Chh--hHH--
Confidence 47999999999987543 57888999999999999999999999999854 44433211011 1 110 011
Q ss_pred HHHHhchHHHHHHHHHHhccCCCccceEEecCccCCchhhHhHHHHHHHHHHhCCCeEEeeCCCceecCCCCCCCCCcee
Q 005047 94 ACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIF 173 (716)
Q Consensus 94 ~~~a~g~~~~~~~~~~~l~~~gi~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~g~iPV~~g~d~v~~~~~~~~~~g~~~ 173 (716)
.+.+++......++...|..+|+++. ++.. ..+....... ..+.+.++|++|.|||++| . .+..+
T Consensus 69 ~~~~~~~~l~~~ll~~~l~~~Gi~a~-~~~~-~~~~~~~~~~-~~~~~~~~l~~g~vPVv~g-----~-------~~~~~ 133 (231)
T PRK00358 69 YMGMLATVMNALALQDALERAGVDTR-VQSA-IPMPQVAEPY-IRRRAIRHLEKGRVVIFAA-----G-------TGNPF 133 (231)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCeE-Eech-hhcccccCcc-cHHHHHHHHHCCCEEEEEC-----C-------CCCCC
Confidence 11112222222245688889998765 2211 1111101011 1345789999999999975 1 12235
Q ss_pred ecchHHHHHHHhhcCCCEEEEeecCCccccCCC-cccccccccccchhchHHHHhcCCCCCcccCCcHHHHHHHHHHHHc
Q 005047 174 WDNDSLAGLLALELKADLLVLLSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACA 252 (716)
Q Consensus 174 ~~sD~~A~~lA~~L~Ad~Li~~TDVdGVy~~dP-~~p~a~~i~~is~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a~~~ 252 (716)
.++|++|+++|.+|+||+|+++|||||||++|| .+|++++|++|+++|+.+. |....|++++..|.++
T Consensus 134 ~ssD~~A~~lA~~l~A~~li~~tdVdGVy~~dP~~~~~a~~i~~i~~~e~~~~-----------g~~~~d~~a~~~a~~~ 202 (231)
T PRK00358 134 FTTDTAAALRAEEIGADVLLKATNVDGVYDADPKKDPDAKKYDRLTYDEVLEK-----------GLKVMDATAISLARDN 202 (231)
T ss_pred CCchHHHHHHHHHcCCCEEEEeeCcCceEcCCCCCCCCCEEeeEecHHHHHHc-----------CCcchhHHHHHHHHHc
Confidence 789999999999999999999999999999999 5899999999999876542 2223588899999999
Q ss_pred CCcEEEeeCCCcchHHHHhcCCcceeEE
Q 005047 253 GIPVVITSGFAMDSIIKVLEGKRVGTLF 280 (716)
Q Consensus 253 gi~v~I~~g~~~~~l~~~~tg~~iGT~i 280 (716)
|++++|+||+.|++|.+++.|+..||++
T Consensus 203 ~i~v~I~~g~~~~~l~~~l~g~~~GT~i 230 (231)
T PRK00358 203 KIPIIVFNMNKPGNLKRVVKGEHIGTLV 230 (231)
T ss_pred CCcEEEECCCCchHHHHHHCCCCCCEEe
Confidence 9999999999999999999999889986
No 161
>TIGR01890 N-Ac-Glu-synth amino-acid N-acetyltransferase. This model represents a clade of amino-acid N-acetyltransferases acting mainly on glutamate in the first step of the "acetylated" ornithine biosynthesis pathway. For this reason it is also called N-acetylglutamate synthase. The enzyme may also act on aspartate.
Probab=99.96 E-value=7.5e-28 Score=267.84 Aligned_cols=240 Identities=19% Similarity=0.209 Sum_probs=175.8
Q ss_pred ccCeEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhcccCCccc-cccc---cc
Q 005047 13 DVKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLAD-LQKP---QN 88 (716)
Q Consensus 13 ~~~~iVIKiGGs~l~~~~~~~~~~~~~~~a~~I~~l~~~G~~vvIVhGGg~~i~~~~~~~~~~~~~~~~~-~~~~---~~ 88 (716)
+++++|||+||+++.+++ +.+++++|+.|+..|.++|||||||++++..+.+ .++++.|.+ ++.+ ++
T Consensus 16 ~~~~~ViK~GG~~~~~~~-------~~~~~~~i~~l~~~g~~~vlVHGgg~~i~~~~~~--~g~~~~~~~G~RvT~~~~l 86 (429)
T TIGR01890 16 RGKTFVVGLGGELVEGGN-------LGNIVADIALLHSLGVRLVLVHGARPQIERILAA--RGRTPHYHRGLRVTDEASL 86 (429)
T ss_pred CCCEEEEEEChhhccCcc-------HHHHHHHHHHHHHCCCcEEEEcCCCHHHHHHHHH--cCCCceeeCCcccCCHHHH
Confidence 367999999999998765 5789999999999999999999999999987643 455555554 3333 23
Q ss_pred chhHHHHHHhchHHH--HHHHHHHhccCCCc-----cc--eEEecC-------ccCCchhhH-hHHHHHHHHHHhCCCeE
Q 005047 89 ELDGKACAAVGQSSL--MALYDTLFSQLDVT-----SS--QLLVTD-------SDFRDEDFR-KQLYDTVQSLLDLRVIP 151 (716)
Q Consensus 89 ~l~~~~~~a~g~~~~--~~~~~~~l~~~gi~-----~~--~~~~~~-------~~~~~~~~~-~~~~~~i~~ll~~g~iP 151 (716)
++..+ ..|+... ...+.......++. .. .++... .|++..+.+ .++.+.|+.+|+.|+||
T Consensus 87 ~~~~~---~~g~vn~~l~~~l~~~~~~~~~~~~~l~~~dg~~~~a~~~~~~~~~~~g~~G~v~~v~~~~l~~ll~~g~ip 163 (429)
T TIGR01890 87 EQAQQ---AAGTLRLAIEARLSMSLSNTPMAGSRLPVVSGNFVTARPIGVIEGVDYEHTGVIRKIDTEGIRRQLDAGSIV 163 (429)
T ss_pred HHHHH---HhChHHHHHHHHHHhcCCcccccccCceEccceEEEEEECCCCcCccccccceEEEEcHHHHHHHHHCCCeE
Confidence 33332 2333331 22222222222211 10 111110 122222222 25789999999999999
Q ss_pred EeeCCCceecCCCCCCCCCcee-ecchHHHHHHHhhcCCCEEEEeecCCccccCCCcccccccccccchhchHHHHhcCC
Q 005047 152 IFNENDAVSTRKAPYEDSSGIF-WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGD 230 (716)
Q Consensus 152 V~~g~d~v~~~~~~~~~~g~~~-~~sD~~A~~lA~~L~Ad~Li~~TDVdGVy~~dP~~p~a~~i~~is~~e~~~~~~~g~ 230 (716)
|++. ++++..|+.+ +|+|++|+.||.+|+|++|+|+|||+|||+++ +++|++|+.+|+++++..
T Consensus 164 vi~p--------i~~~~~g~~~nvnaD~~A~~lA~al~a~kli~ltdv~Gv~~~~-----g~~i~~i~~~~~~~l~~~-- 228 (429)
T TIGR01890 164 LLSP--------LGHSPTGETFNLDMEDVATSVAISLKADKLIYFTLSPGISDPD-----GTLAAELSPQEVESLAER-- 228 (429)
T ss_pred EECC--------cccCCCCCEEEeCHHHHHHHHHHHcCCCEEEEEeCCCcccCCC-----CCCcccCCHHHHHHHHHh--
Confidence 9974 2344466677 99999999999999999999999999999753 789999999999887753
Q ss_pred CCCcccCC-cHHHHHHHHHHHHcCCc-EEEeeCCCcchH-HHHhcCCcceeEEecC
Q 005047 231 KSRVGRGG-MTAKVNAAYCAACAGIP-VVITSGFAMDSI-IKVLEGKRVGTLFHRD 283 (716)
Q Consensus 231 ~~~~~~gg-M~~Kl~aa~~a~~~gi~-v~I~~g~~~~~l-~~~~tg~~iGT~i~~~ 283 (716)
..+| |.+|+++|..|++.|++ |||+||+.|+++ .++++.+..||.+..+
T Consensus 229 ----~~~~~~~~kl~~a~~a~~~gv~~v~i~~g~~~~~l~~el~~~~g~GT~i~~d 280 (429)
T TIGR01890 229 ----LGSETTRRLLSAAVKACRGGVHRSHIVSYAEDGSLLQELFTRDGIGTSISKE 280 (429)
T ss_pred ----ccCCCcHHHHHHHHHHHHcCCCeEEEECCCCCcHHHHHHhcCCCCcceEecc
Confidence 2455 59999999999999987 999999999998 6688998899999876
No 162
>cd04239 AAK_UMPK-like AAK_UMPK-like: UMP kinase (UMPK)-like, the microbial/chloroplast uridine monophosphate kinase (uridylate kinase) enzyme that catalyzes UMP phosphorylation and plays a key role in pyrimidine nucleotide biosynthesis. Regulation of this process is via feed-back control and via gene repression of carbamoyl phosphate synthetase (the first enzyme of the pyrimidine biosynthesis pathway). The UMP kinases of E. coli (Ec) and Pyrococcus furiosus (Pf) are known to function as homohexamers, with GTP and UTP being allosteric effectors. Like other related enzymes (carbamate kinase, aspartokinase, and N-acetylglutamate kinase) the E. coli and most bacterial UMPKs have a conserved, N-terminal, lysine residue proposed to function in the catalysis of the phosphoryl group transfer, whereas most archaeal UMPKs appear to lack this residue and the Pyrococcus furiosus structure has an additional Mg ion bound to the ATP molecule which is proposed to function as the catalysis instead. Als
Probab=99.96 E-value=5.2e-28 Score=246.82 Aligned_cols=227 Identities=19% Similarity=0.256 Sum_probs=170.6
Q ss_pred eEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhcccCCcccccccccchhHHHH
Q 005047 16 RLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKAC 95 (716)
Q Consensus 16 ~iVIKiGGs~l~~~~~~~~~~~~~~~a~~I~~l~~~G~~vvIVhGGg~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 95 (716)
++|||||||++++++++++.+.+.+++++|+++.+.|++++||||||..+++.....+. .. + . .+ ..+
T Consensus 1 ~iViKiGGs~l~~~~~~~~~~~i~~~a~~i~~~~~~g~~vvvV~ggG~~a~~~~~~~~~-~~----~---~--~~--~~~ 68 (229)
T cd04239 1 RIVLKLSGEALAGEGGGIDPEVLKEIAREIKEVVDLGVEVAIVVGGGNIARGYIAAARG-MP----R---A--TA--DYI 68 (229)
T ss_pred CEEEEECcceecCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCChHHhhHHHhhcC-CC----h---h--hH--HHH
Confidence 58999999999998778889999999999999999999999999986655664322111 11 0 0 01 112
Q ss_pred HHhchHHHHHHHHHHhccCCCccceEEecCccCCchhhHhHHHHHHHHHHhCCCeEEeeCCCceecCCCCCCCCCceeec
Q 005047 96 AAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWD 175 (716)
Q Consensus 96 ~a~g~~~~~~~~~~~l~~~gi~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~g~iPV~~g~d~v~~~~~~~~~~g~~~~~ 175 (716)
.+.+......++...|..+|+++.++... ++..... ..+.+.+..+++.|.|||++|. .|..+.+
T Consensus 69 ~~~~~~l~~~l~~~~l~~~Gi~a~~~~~~--~~~~~~~-~~~~~~l~~~l~~g~ipVi~g~------------~g~~~~~ 133 (229)
T cd04239 69 GMLATVMNALALQDALEKLGVKTRVMSAI--PMQGVAE-PYIRRRAIRHLEKGRIVIFGGG------------TGNPGFT 133 (229)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCEEEeCHH--HHhhhhc-cccHHHHHHHHhCCCEEEEeCc------------cCCCCCC
Confidence 22223233334567888888887653211 1111000 1135679999999999999971 2333578
Q ss_pred chHHHHHHHhhcCCCEEEEeecCCccccCCC-cccccccccccchhchHHHHhcCCCCCcccCCcHHHHHHHHHHHHcCC
Q 005047 176 NDSLAGLLALELKADLLVLLSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGI 254 (716)
Q Consensus 176 sD~~A~~lA~~L~Ad~Li~~TDVdGVy~~dP-~~p~a~~i~~is~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a~~~gi 254 (716)
+|++|+++|.+|+||+|+++|||||||++|| .+|++++|++|+++|+.++.. |..|+.++..+.+.|+
T Consensus 134 sD~~A~~lA~~l~a~~li~~tdVdGvy~~dP~~~~~a~~i~~i~~~e~~~~~~-----------~~~~~~a~~~~~~~~i 202 (229)
T cd04239 134 TDTAAALRAEEIGADVLLKATNVDGVYDADPKKNPDAKKYDRISYDELLKKGL-----------KVMDATALTLCRRNKI 202 (229)
T ss_pred cHHHHHHHHHHcCCCEEEEEECCCcccCCCCCCCCCCeEEeEEcHHHHHHHhc-----------CCccHHHHHHHHHCCC
Confidence 9999999999999999999999999999999 489999999999988876421 4456778888899999
Q ss_pred cEEEeeCCCcchHHHHhcCCcceeEE
Q 005047 255 PVVITSGFAMDSIIKVLEGKRVGTLF 280 (716)
Q Consensus 255 ~v~I~~g~~~~~l~~~~tg~~iGT~i 280 (716)
+++|+||+.|+++.+++.|+..||++
T Consensus 203 ~v~I~~g~~~~~l~~~l~g~~~GT~i 228 (229)
T cd04239 203 PIIVFNGLKPGNLLRALKGEHVGTLI 228 (229)
T ss_pred eEEEECCCChhHHHHHHcCCCCCeEe
Confidence 99999999999999999998889976
No 163
>cd04236 AAK_NAGS-Urea AAK_NAGS-Urea: N-acetylglutamate (NAG) kinase-like domain of the NAG Synthase (NAGS) of the urea cycle found in animals. Ureogenic NAGS is a mitochondrial enzyme catalyzing the formation of NAG from acetylcoenzyme A and L-glutamate; NAG is an essential allosteric activator of carbamylphosphate synthase I, the first and rate limiting enzyme of the urea cycle. Ureogenic NAGS activity is dependent on the concentration of glutamate (substrate) and arginine (activator). Domain architecture of ureogenic NAGS consists of an N-terminal NAG kinase-like (ArgB) domain (this CD) and a C-terminal DUF619 domain. Members of this CD belong to the protein superfamily, the Amino Acid Kinase Family (AAKF).
Probab=99.96 E-value=2.8e-28 Score=250.90 Aligned_cols=222 Identities=15% Similarity=0.096 Sum_probs=167.2
Q ss_pred cCeEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhcccCCcccccccccchhHH
Q 005047 14 VKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGK 93 (716)
Q Consensus 14 ~~~iVIKiGGs~l~~~~~~~~~~~~~~~a~~I~~l~~~G~~vvIVhGGg~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 93 (716)
.+.+|||+||+++.++. .+..++++|+.|++.|.++|||||||++++..+. ...+...+ +.
T Consensus 35 ~~f~VIK~GG~~~~~~~------~~~~l~~dla~L~~lGl~~VlVHGggp~i~~~l~------~~~~~~~~---~v---- 95 (271)
T cd04236 35 PAFAVLEVDHSVFRSLE------MVQSLSFGLAFLQRMDMKLLVVMGLSAPDGTNMS------DLELQAAR---SR---- 95 (271)
T ss_pred CCEEEEEEChhhhcCch------hHHHHHHHHHHHHHCCCeEEEEeCCChHHhhhhc------CCcchhee---hh----
Confidence 57899999999997543 4789999999999999999999999999987653 11222211 11
Q ss_pred HHHHhchHHHHHHHHHHhccCCCccceE-----Eec-C--ccCCchhh-HhHHHHHHHHHHhCCCeEEeeCCCceecCCC
Q 005047 94 ACAAVGQSSLMALYDTLFSQLDVTSSQL-----LVT-D--SDFRDEDF-RKQLYDTVQSLLDLRVIPIFNENDAVSTRKA 164 (716)
Q Consensus 94 ~~~a~g~~~~~~~~~~~l~~~gi~~~~~-----~~~-~--~~~~~~~~-~~~~~~~i~~ll~~g~iPV~~g~d~v~~~~~ 164 (716)
+...... +...|.+.|+++..+ +++ . .+++..+. ..++.+.|+.+|+.|+|||+++ +
T Consensus 96 -~~~~n~~-----Lv~~L~~~G~~A~gl~g~~~~i~a~~~~d~g~vG~V~~Vd~~~I~~lL~~g~IPVisp--------l 161 (271)
T cd04236 96 -LVKDCKT-----LVEALQANSAAAHPLFSGESVLQAEEPEPGASKGPSVSVDTELLQWCLGSGHIPLVCP--------I 161 (271)
T ss_pred -HHHHHHH-----HHHHHHhCCCCeeeecCccceEEEEEcccCCccceEEEECHHHHHHHHhCCCeEEECC--------c
Confidence 1122121 123333444433222 111 1 12111122 2367899999999999999986 2
Q ss_pred CCCCCCcee-ecchHHHHHHHhhcCCCEEEEeecCCccccCCCcccccccccccch-hchHHHHhcCCCCCcccCCc---
Q 005047 165 PYEDSSGIF-WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIR-AKHQAEITFGDKSRVGRGGM--- 239 (716)
Q Consensus 165 ~~~~~g~~~-~~sD~~A~~lA~~L~Ad~Li~~TDVdGVy~~dP~~p~a~~i~~is~-~e~~~~~~~g~~~~~~~ggM--- 239 (716)
+++.+|..| +|+|++|..+|.+|+|++|+|+||++|||+++ +++|++|+. +|+++++..+ .++|||
T Consensus 162 g~~~~G~~~NiNaD~~A~~lA~aL~A~KLIfltd~~GV~~~~-----g~lI~~l~~~~e~~~li~~g----~i~gGm~~k 232 (271)
T cd04236 162 GETSSGRSVSLDSSEVTTAIAKALQPIKVIFLNRSGGLRDQK-----HKVLPQVHLPADLPSLSDAE----WLSETEQNR 232 (271)
T ss_pred eECCCCCEEEECHHHHHHHHHHHcCCCEEEEEeCCcceECCC-----CCCccccCcHHHHHHHHhCC----EEcCCeeec
Confidence 334467777 99999999999999999999999999999753 789999995 9999888764 899999
Q ss_pred HHHHHHHHHHHHcCCcEEEeeCCCcchH-HHHhcCCcceeEE
Q 005047 240 TAKVNAAYCAACAGIPVVITSGFAMDSI-IKVLEGKRVGTLF 280 (716)
Q Consensus 240 ~~Kl~aa~~a~~~gi~v~I~~g~~~~~l-~~~~tg~~iGT~i 280 (716)
+||+++|+.++..|++|+|++ |+++ .++++....||.+
T Consensus 233 i~ki~~~l~~l~~g~sv~I~~---~~~ll~elft~~g~GT~~ 271 (271)
T cd04236 233 IQDIATLLNALPSMSSAVITS---AETLLTELFSHKGSGTLF 271 (271)
T ss_pred hHHHHHHHHhcccCCeEEEeC---hHHHHHHHhccCCCCCcC
Confidence 999999999999999999998 7887 8899998889863
No 164
>cd04249 AAK_NAGK-NC AAK_NAGK-NC: N-Acetyl-L-glutamate kinase - noncyclic (NAGK-NC) catalyzes the phosphorylation of the gamma-COOH group of N-acetyl-L-glutamate (NAG) by ATP in the second step of microbial arginine biosynthesis using the acetylated, noncyclic route of ornithine biosynthesis. There are two variants of this pathway. In one, typified by the pathway in Escherichia coli, glutamate is acetylated by acetyl-CoA and acetylornithine is deacylated hydrolytically. In this pathway, feedback inhibition by arginine occurs at the initial acetylation of glutamate and not at the phosphorylation of NAG by NAGK. Homodimeric NAGK-NC are members of the Amino Acid Kinase Superfamily (AAK).
Probab=99.96 E-value=5.3e-28 Score=250.38 Aligned_cols=236 Identities=25% Similarity=0.263 Sum_probs=165.2
Q ss_pred EEEEeCCcccccCCCcccHHHHHHHHHHHHHHHH-CCCeEEEEeCChhHhhHHHhhhhhcccCCccc-ccccccchhHHH
Q 005047 17 LVVKVGTAVVTRSDGRLALGRLGALLEQLKELNS-QGFEIILVSSGAVGVGRQRLRYRKLVNSSLAD-LQKPQNELDGKA 94 (716)
Q Consensus 17 iVIKiGGs~l~~~~~~~~~~~~~~~a~~I~~l~~-~G~~vvIVhGGg~~i~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~ 94 (716)
+||||||+++++++ .+.+++++|+.+++ .|.++|||||||+++.... +. .+.++.+.+ ++.+..+.....
T Consensus 1 ~ViK~GGs~l~~~~------~~~~~~~~i~~~~~~~~~~iVlVhGgg~~~~~~~-~~-~g~~~~~~~g~rvt~~~~l~~~ 72 (252)
T cd04249 1 LVIKLGGALLETEA------ALEQLFSALSEYQQQHNRQLVIVHGGGCVVDELL-KK-LNFPSEKKNGLRVTPKEQIPYI 72 (252)
T ss_pred CEEEEChHHhcChh------hHHHHHHHHHHHHHhCCCCEEEECCCCHHHHHHH-HH-cCCCCEEECCEecCCHHHHHHH
Confidence 48999999998754 47899999998864 5778999999988766543 32 233333332 222211100111
Q ss_pred HHHh-chHHHHHHHHHHhccCCCccceEE------ecCc----cCCchhh-HhHHHHHHHHHHhCCCeEEeeCCCceecC
Q 005047 95 CAAV-GQSSLMALYDTLFSQLDVTSSQLL------VTDS----DFRDEDF-RKQLYDTVQSLLDLRVIPIFNENDAVSTR 162 (716)
Q Consensus 95 ~~a~-g~~~~~~~~~~~l~~~gi~~~~~~------~~~~----~~~~~~~-~~~~~~~i~~ll~~g~iPV~~g~d~v~~~ 162 (716)
..++ |+.. ..+.+.+ .+.|+++..+. ++.. +++..+. ..++.+.++.+++.|+|||+++ ..
T Consensus 73 ~~~~~~~~n-~~lv~~l-~~~Gv~a~~l~~~~~~~~~~~~~~~~~~~~G~v~~i~~~~l~~ll~~g~ipVi~~-~g---- 145 (252)
T cd04249 73 TGALAGTAN-KQLMAQA-IKAGLKPVGLSLADGGMTAVTQLDPELGAVGKATANDPSLLNDLLKAGFLPIISS-IG---- 145 (252)
T ss_pred HHHHcCccc-HHHHHHH-HhCCCCceeeeccCCCEEEEEEcCCCCCcccceEEEcHHHHHHHHHCCCEEEECC-CE----
Confidence 2222 2211 1122233 35666554332 2211 2322222 2356789999999999999986 22
Q ss_pred CCCCCCCCcee-ecchHHHHHHHhhcCCCEEEEeecCCccccCCCcccccccccccchhchHHHHhcCCCCCcccCCcHH
Q 005047 163 KAPYEDSSGIF-WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTA 241 (716)
Q Consensus 163 ~~~~~~~g~~~-~~sD~~A~~lA~~L~Ad~Li~~TDVdGVy~~dP~~p~a~~i~~is~~e~~~~~~~g~~~~~~~ggM~~ 241 (716)
.+..|+.+ +|+|++|+++|.+|+|+ ++|+|||||||++|| ++|++++++|+++++.. .+++|||.+
T Consensus 146 ---~~~~g~~~~~~~D~~A~~lA~~l~A~-~i~ltdv~Gv~~~~~-----~~i~~i~~~e~~~~~~~----g~~~gGm~~ 212 (252)
T cd04249 146 ---ADDQGQLMNVNADQAATAIAQLLNAD-LVLLSDVSGVLDADK-----QLISELNAKQAAELIEQ----GVITDGMIV 212 (252)
T ss_pred ---ECCCCCEeeecHHHHHHHHHHHcCCC-EEEEeCCcccCCCCC-----cCccccCHHHHHHHHhc----CCCcCCcHH
Confidence 22245555 99999999999999999 789999999998764 79999999999887653 378999999
Q ss_pred HHHHHHHHHHcC-CcEEEeeCCCcchHHHHhcCCcceeEE
Q 005047 242 KVNAAYCAACAG-IPVVITSGFAMDSIIKVLEGKRVGTLF 280 (716)
Q Consensus 242 Kl~aa~~a~~~g-i~v~I~~g~~~~~l~~~~tg~~iGT~i 280 (716)
|+++|..+++.+ ++++|+||+.|+.+.++++|+..||.+
T Consensus 213 kl~~a~~~~~~~~~~v~I~~g~~~~~l~~~l~g~~~GT~I 252 (252)
T cd04249 213 KVNAALDAAQSLRRGIDIASWQYPEQLTALLAGEPVGTKI 252 (252)
T ss_pred HHHHHHHHHHhCCCeEEEEeCCCccHHHHHHcCCCCCcCC
Confidence 999999998876 569999999999999999999889864
No 165
>cd04252 AAK_NAGK-fArgBP AAK_NAGK-fArgBP: N-Acetyl-L-glutamate kinase (NAGK) of the fungal arginine-biosynthetic pathway (fArgBP). The nuclear-encoded, mitochondrial polyprotein precursor with an N-terminal NAGK (ArgB) domain (this CD), a central DUF619 domain, and a C-terminal reductase domain (ArgC, N-Acetylglutamate Phosphate Reductase, NAGPR). The precursor is cleaved in the mitochondria into two distinct enzymes (NAGK-DUF619 and NAGPR). Native molecular weights of these proteins indicate that the kinase is an octamer whereas the reductase is a dimer. This CD also includes some gamma-proteobacteria (Xanthomonas and Xylella) NAG kinases with an N-terminal NAGK (ArgB) domain (this CD) and a C-terminal DUF619 domain. The DUF619 domain is described as a putative distant homolog of the acetyltransferase, ArgA, predicted to function in NAG synthase association in fungi. Eukaryotic sequences have an N-terminal mitochondrial transit peptide. Members of this NAG kinase domain CD belong to th
Probab=99.96 E-value=8.7e-28 Score=247.49 Aligned_cols=228 Identities=19% Similarity=0.182 Sum_probs=163.4
Q ss_pred EEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhcccCCccc-ccccc---cchhHH
Q 005047 18 VVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLAD-LQKPQ---NELDGK 93 (716)
Q Consensus 18 VIKiGGs~l~~~~~~~~~~~~~~~a~~I~~l~~~G~~vvIVhGGg~~i~~~~~~~~~~~~~~~~~-~~~~~---~~l~~~ 93 (716)
||||||+.+++. +.+++++|+.|++.|.++|||||||+++.+.+.+ .+++++|.+ ++.+. +...++
T Consensus 2 ViKiGG~~~~~~--------l~~~~~di~~l~~~g~~~VlVHGgg~~i~~~~~~--~gi~~~~~~g~RvT~~~~l~~v~~ 71 (248)
T cd04252 2 VIKVGGAIIEDD--------LDELAASLSFLQHVGLYPIVVHGAGPQLNEELEA--AGVEPEYVDGLRVTDPETLAVARK 71 (248)
T ss_pred EEEEChhhhhcc--------HHHHHHHHHHHHHCCCcEEEEeCCCHHHHHHHHH--cCCCcEeeCCcccCCHHHHHHHHH
Confidence 899999999862 6899999999999999999999999988876532 455555543 33322 222222
Q ss_pred HHHHhchHHHHHHHHHHhccCCCccce----EEec----CccCCchhh-HhHHHHHHHHHHhCCCeEEeeCCCceecCCC
Q 005047 94 ACAAVGQSSLMALYDTLFSQLDVTSSQ----LLVT----DSDFRDEDF-RKQLYDTVQSLLDLRVIPIFNENDAVSTRKA 164 (716)
Q Consensus 94 ~~~a~g~~~~~~~~~~~l~~~gi~~~~----~~~~----~~~~~~~~~-~~~~~~~i~~ll~~g~iPV~~g~d~v~~~~~ 164 (716)
++..+.. .+...|.++|+++.. ++.. ..|++..+. ..++.+.|+.+|+.|+|||+++ +++
T Consensus 72 al~~vn~-----~iv~~l~~~g~~a~~l~~~~~~a~~~~~~d~g~~G~v~~i~~~~i~~~L~~g~IPVi~p-~~~----- 140 (248)
T cd04252 72 VFLEENL-----KLVEALERNGARARPITSGVFEAEYLDKDKYGLVGKITGVNKAPIEAAIRAGYLPILTS-LAE----- 140 (248)
T ss_pred HHHHHHH-----HHHHHHHhCCCCcccccCceEEEEECcCccCCccCceeeECHHHHHHHHHCCCeEEECC-ceE-----
Confidence 2222222 223445455544332 1211 123332222 2356899999999999999986 322
Q ss_pred CCCCCCcee-ecchHHHHHHHhhcCCCEEEEeecCCccccCCCcccccccccccch-hchHHHHhcCCCCCcccCCcHHH
Q 005047 165 PYEDSSGIF-WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIR-AKHQAEITFGDKSRVGRGGMTAK 242 (716)
Q Consensus 165 ~~~~~g~~~-~~sD~~A~~lA~~L~Ad~Li~~TDVdGVy~~dP~~p~a~~i~~is~-~e~~~~~~~g~~~~~~~ggM~~K 242 (716)
+..|..+ +|+|++|+.+|.+|+|++|+|+|||+|||+++ +++|++|+. ++.++++.. .+++|||++|
T Consensus 141 --~~~g~~~nvnaD~~A~~lA~aL~a~kli~ltdv~GV~~~~-----g~~i~~i~~~~~~~~l~~~----~~vtgGM~~K 209 (248)
T cd04252 141 --TPSGQLLNVNADVAAGELARVLEPLKIVFLNETGGLLDGT-----GKKISAINLDEEYDDLMKQ----PWVKYGTKLK 209 (248)
T ss_pred --CCCCCEEEECHHHHHHHHHHHcCCCeEEEEECCcccCCCC-----CCcccccCHHHHHHHHHHc----CCcCCchHHH
Confidence 2255566 99999999999999999999999999999763 789999997 466666643 3899999999
Q ss_pred HHHHHHHHHc--CCc-EEEeeCCCcchH-HHHhcCCcceeEE
Q 005047 243 VNAAYCAACA--GIP-VVITSGFAMDSI-IKVLEGKRVGTLF 280 (716)
Q Consensus 243 l~aa~~a~~~--gi~-v~I~~g~~~~~l-~~~~tg~~iGT~i 280 (716)
|+++..+.+. ++. |+|++ ++++ .++++.+..||.+
T Consensus 210 l~~~~~~~~~~~~~~~v~i~~---~~~ll~elf~~~g~GT~i 248 (248)
T cd04252 210 IKEIKELLDTLPRSSSVSITS---PDDLQKELFTHSGAGTLI 248 (248)
T ss_pred HHHHHHHHHhCCCceEEEEEC---CchHHHHHhcCCCCCccC
Confidence 9999998887 554 99988 6887 6788888889864
No 166
>PRK14558 pyrH uridylate kinase; Provisional
Probab=99.96 E-value=1.5e-27 Score=243.72 Aligned_cols=223 Identities=23% Similarity=0.337 Sum_probs=168.4
Q ss_pred CeEEEEeCCcccccCCC-cccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhcccCCcccccccccchhHH
Q 005047 15 KRLVVKVGTAVVTRSDG-RLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGK 93 (716)
Q Consensus 15 ~~iVIKiGGs~l~~~~~-~~~~~~~~~~a~~I~~l~~~G~~vvIVhGGg~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 93 (716)
+++|||+|||+|++++. +++.+.+.+++++|+++++.|++++||||||. +.+... ..+. . ..
T Consensus 1 ~riviKlGgs~lt~~~~~~~~~~~i~~la~~i~~~~~~g~~viiV~GgGs-~~~g~~--~~~~-------~-------~~ 63 (231)
T PRK14558 1 KRVLLKLSGEALSGEGEKGFDPERVNYLVNEIKSVVEYGFKIGIVIGAGN-LFRGVE--LKEL-------S-------PT 63 (231)
T ss_pred CeEEEEeeHHHccCCCCCCcCHHHHHHHHHHHHHHHHCCCeEEEEECccH-HHHHHh--ccCC-------C-------hH
Confidence 57999999999998754 68999999999999999999999999997744 533211 0110 0 01
Q ss_pred HHHHhchH--HHH-HHHHHHhccCCCccceE--EecCccCCchhhHhHHHHHHHHHHhCCCeEEeeCCCceecCCCCCCC
Q 005047 94 ACAAVGQS--SLM-ALYDTLFSQLDVTSSQL--LVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYED 168 (716)
Q Consensus 94 ~~~a~g~~--~~~-~~~~~~l~~~gi~~~~~--~~~~~~~~~~~~~~~~~~~i~~ll~~g~iPV~~g~d~v~~~~~~~~~ 168 (716)
....+|+. .+. .++...|..+|+++..+ +....++ .....+.+..+++.|.|||++|+.
T Consensus 64 ~~d~ig~~~~~ln~~~~~~~l~~~gi~a~~~~~~~~~~~~-----~~~~~~~i~~ll~~g~vpV~~G~~----------- 127 (231)
T PRK14558 64 RADQIGMLGTVINALYLKDIFEKSGLKAVIVSQIVNLPSV-----EPINYDDIELYFRAGYIVIFAGGT----------- 127 (231)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCeEEeccccccchh-----hhhhHHHHHHHHHCCCEEEEECCC-----------
Confidence 12223332 122 24578899999885322 1111222 122357899999999999999831
Q ss_pred CCceeecchHHHHHHHhhcCCCEEEEeecCCccccCCC-cccccccccccchhchHHHHhcCCCCCcccCCcHHHHHHHH
Q 005047 169 SSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAY 247 (716)
Q Consensus 169 ~g~~~~~sD~~A~~lA~~L~Ad~Li~~TDVdGVy~~dP-~~p~a~~i~~is~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~ 247 (716)
+.+++++|++|+++|..|+||.|+++|||||||++|| ++|++++|++|+++|+.+. +. ..| +.+++.
T Consensus 128 -~~~~~~~D~~a~~lA~~l~a~~l~~~tdVdGvy~~dP~~~~~a~~i~~i~~~e~~~~---g~------~~~--d~~a~~ 195 (231)
T PRK14558 128 -SNPFFTTDTAAALRAVEMKADILIKATKVDGIYDKDPKKFPDAKKIDHLTFSEAIKM---GL------KVM--DTEAFS 195 (231)
T ss_pred -CCCCCCcHHHHHHHHHHcCCCEEEEEecCCeeEccCCCCCCCCeEcccccHHHHHHc---Cc------ccc--cHHHHH
Confidence 2235789999999999999999999999999999999 5999999999999888653 21 122 567888
Q ss_pred HHHHcCCcEEEeeCCCcchHHHHhcCCcceeEEec
Q 005047 248 CAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHR 282 (716)
Q Consensus 248 ~a~~~gi~v~I~~g~~~~~l~~~~tg~~iGT~i~~ 282 (716)
.|.++|++|+|+||+.|+++.+++.|+..||++.+
T Consensus 196 ~a~~~gi~v~I~ng~~~~~l~~~l~g~~~GT~i~~ 230 (231)
T PRK14558 196 ICKKYGITILVINFFEPGNLLKALKGENVGTLVVP 230 (231)
T ss_pred HHHHCCCCEEEEeCCCCCHHHHHHCCCCCcEEeCC
Confidence 88899999999999999999999999989999864
No 167
>cd04235 AAK_CK AAK_CK: Carbamate kinase (CK) catalyzes both the ATP-phosphorylation of carbamate and carbamoyl phosphate (CP) utilization with the production of ATP from ADP and CP. Both CK (this CD) and nonhomologous CP synthetase synthesize carbamoyl phosphate, an essential precursor of arginine and pyrimidine bases, in the presence of ATP, bicarbonate, and ammonia. CK is a homodimer of 33 kDa subunits and is a member of the Amino Acid Kinase Superfamily (AAK).
Probab=99.96 E-value=1.8e-27 Score=247.93 Aligned_cols=251 Identities=25% Similarity=0.335 Sum_probs=177.1
Q ss_pred eEEEEeCCcccccCCC----cccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhcccCCcccccccccchh
Q 005047 16 RLVVKVGTAVVTRSDG----RLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELD 91 (716)
Q Consensus 16 ~iVIKiGGs~l~~~~~----~~~~~~~~~~a~~I~~l~~~G~~vvIVhGGg~~i~~~~~~~~~~~~~~~~~~~~~~~~l~ 91 (716)
++||||||++|..++. ..+.+++...+++|+.+.+.|++++||||+|||+|..+.+...... . ...+.|+
T Consensus 1 rivialgGnal~~~~~~~~~~~q~~~~~~~a~~i~~l~~~g~~vvi~hGnGPqvG~i~~~~~~~~~----~--~~~~pld 74 (308)
T cd04235 1 RIVVALGGNALLRRGEPGTAEEQRENVKIAAKALADLIKNGHEVVITHGNGPQVGNLLLQNEAAAE----K--VPAYPLD 74 (308)
T ss_pred CEEEEecHHHhCCCCCCCCCCccHHHHHHHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHHhccc----c--CCCCCcc
Confidence 5899999999987553 4678899999999999999999999999999999987765332110 0 1112222
Q ss_pred HHHHHHhchHHH--HHHHHHHhccCCCccc------eEEecCcc------------CCc--------------------h
Q 005047 92 GKACAAVGQSSL--MALYDTLFSQLDVTSS------QLLVTDSD------------FRD--------------------E 131 (716)
Q Consensus 92 ~~~~~a~g~~~~--~~~~~~~l~~~gi~~~------~~~~~~~~------------~~~--------------------~ 131 (716)
.....+.|+.+. ...+.+.|...+++.. +..+...| |-+ +
T Consensus 75 ~~~a~~~G~ig~~~~~al~~~l~~~~~~~~v~t~~t~~~V~~~dpaf~~ptKpiG~~y~~~~a~~~~~~~g~~~~~d~~~ 154 (308)
T cd04235 75 VCGAMSQGMIGYMLQQALDNELPKRGIDKPVVTLVTQVVVDANDPAFKNPTKPIGPFYSEEEAEELAAEKGWTFKEDAGR 154 (308)
T ss_pred hhcchhhHHHHHHHHHHHHHHHHHcCCCCceEEEEeEEEEcCCCccccCCCCCcCCCcCHHHHHHHHHHcCCEEEEeCCC
Confidence 223344444442 2345577777665431 22222111 111 1
Q ss_pred hhHh----------HHHHHHHHHHhCCCeEEeeCCCceecCCCCCCCCCce-eecchHHHHHHHhhcCCCEEEEeecCCc
Q 005047 132 DFRK----------QLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGI-FWDNDSLAGLLALELKADLLVLLSDVEG 200 (716)
Q Consensus 132 ~~~~----------~~~~~i~~ll~~g~iPV~~g~d~v~~~~~~~~~~g~~-~~~sD~~A~~lA~~L~Ad~Li~~TDVdG 200 (716)
++++ .+.+.|+.||++|+|||++|...+......+...+.. ++|+|++|++||.+|+||+|+++|||||
T Consensus 155 g~rrvV~SP~P~~iv~~~~I~~Ll~~g~IpI~~GggGiPv~~~~~~~~gveaVid~D~~AallA~~l~Ad~LiilTdVdG 234 (308)
T cd04235 155 GYRRVVPSPKPKDIVEIEAIKTLVDNGVIVIAAGGGGIPVVREGGGLKGVEAVIDKDLASALLAEEINADLLVILTDVDN 234 (308)
T ss_pred CceeeeCCCCCccccCHHHHHHHHHCCCEEEEECCCccCEEEcCCceeeeeeccCccHHHHHHHHHcCCCEEEEEecCCe
Confidence 1111 2358899999999999999832222110000001111 4889999999999999999999999999
Q ss_pred cccCCCcccccccccccchhchHHHHhcCCCCCcccCCcHHHHHHHHHHHHcC-CcEEEeeCCCcchHHHHhcCCcceeE
Q 005047 201 LYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAG-IPVVITSGFAMDSIIKVLEGKRVGTL 279 (716)
Q Consensus 201 Vy~~dP~~p~a~~i~~is~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a~~~g-i~v~I~~g~~~~~l~~~~tg~~iGT~ 279 (716)
||++++ +|++++|++++++|+.+++.. +.+.+|||.+|+++|+.+++.| .+++|+| ++.+.+++.|+ .||.
T Consensus 235 Vy~~~~-~pda~~i~~Is~~e~~~l~~~---g~~~tGGM~pKv~aA~~~a~~gg~~v~I~~---~~~i~~aL~G~-~GT~ 306 (308)
T cd04235 235 VYINFG-KPNQKALEQVTVEELEKYIEE---GQFAPGSMGPKVEAAIRFVESGGKKAIITS---LENAEAALEGK-AGTV 306 (308)
T ss_pred EECCCC-CCCCeEcCCcCHHHHHHHHhc---CccccCCcHHHHHHHHHHHHhCCCeEEECC---HHHHHHHHCCC-CCeE
Confidence 999754 689999999999999887654 3578999999999999988875 5699987 67888888887 6997
Q ss_pred E
Q 005047 280 F 280 (716)
Q Consensus 280 i 280 (716)
+
T Consensus 307 I 307 (308)
T cd04235 307 I 307 (308)
T ss_pred E
Confidence 6
No 168
>cd04238 AAK_NAGK-like AAK_NAGK-like: N-Acetyl-L-glutamate kinase (NAGK)-like . Included in this CD are the Escherichia coli and Pseudomonas aeruginosa type NAGKs which catalyze the phosphorylation of N-acetyl-L-glutamate (NAG) by ATP in the second step of arginine biosynthesis found in bacteria and photosynthetic organisms using either the acetylated, noncyclic (NC), or non-acetylated, cyclic (C) route of ornithine biosynthesis. Also included in this CD is a distinct group of uncharacterized (UC) bacterial and archeal NAGKs. Members of this CD belong to the Amino Acid Kinase Superfamily (AAK).
Probab=99.95 E-value=7.3e-28 Score=250.02 Aligned_cols=237 Identities=23% Similarity=0.322 Sum_probs=166.9
Q ss_pred EEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhcccCCccc-ccccccchhHHHH
Q 005047 17 LVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLAD-LQKPQNELDGKAC 95 (716)
Q Consensus 17 iVIKiGGs~l~~~~~~~~~~~~~~~a~~I~~l~~~G~~vvIVhGGg~~i~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~ 95 (716)
+||||||+++++++ .+.+++++|+.++..|.++|||||||+ +++.+++.+. ...++.+ ++.+...--....
T Consensus 1 ~ViKlGGs~l~~~~------~~~~~~~~i~~l~~~g~~~VlVhG~g~-~~~~~~~~~~-~~~~~~~~~r~t~~~~l~~~~ 72 (256)
T cd04238 1 VVIKYGGSAMKDEE------LKEAFADDIVLLKQVGINPVIVHGGGP-EINELLKRLG-IESEFVNGLRVTDKETMEIVE 72 (256)
T ss_pred CEEEEChHHhcCcc------HHHHHHHHHHHHHHCCCCEEEECCCcH-HHHHHHHHCC-CCCEeECCeecCCHHHHHHHH
Confidence 58999999999875 368999999999999999999998866 4554444332 2222221 1211100000122
Q ss_pred HHh-chHHHHHHHHHHhccCCCccceE------EecCc-------cCCchhh-HhHHHHHHHHHHhCCCeEEeeCCCcee
Q 005047 96 AAV-GQSSLMALYDTLFSQLDVTSSQL------LVTDS-------DFRDEDF-RKQLYDTVQSLLDLRVIPIFNENDAVS 160 (716)
Q Consensus 96 ~a~-g~~~~~~~~~~~l~~~gi~~~~~------~~~~~-------~~~~~~~-~~~~~~~i~~ll~~g~iPV~~g~d~v~ 160 (716)
.++ |.. ...+...|.+.|+++..+ +++.. |+...+. ...+.+.++.+|+.|+|||+++ +.
T Consensus 73 ~a~~g~l--n~~i~~~L~~~Gv~a~~l~~~~~~~~~~~~~~~~~~~~~~~g~i~~i~~~~l~~ll~~g~ipVv~~---~~ 147 (256)
T cd04238 73 MVLAGKV--NKELVSLLNRAGGKAVGLSGKDGGLIKAEKKEEKDIDLGFVGEVTEVNPELLETLLEAGYIPVIAP---IA 147 (256)
T ss_pred HHHcCch--HHHHHHHHHhCCCCCCCcccccCCEEEEEECCCCCCCcccccceEEECHHHHHHHHHCCCEEEECC---cE
Confidence 233 422 223456676666654332 22221 1111121 2246789999999999999985 22
Q ss_pred cCCCCCCCCCcee-ecchHHHHHHHhhcCCCEEEEeecCCccccCCCcccccccccccchhchHHHHhcCCCCCcccCCc
Q 005047 161 TRKAPYEDSSGIF-WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGM 239 (716)
Q Consensus 161 ~~~~~~~~~g~~~-~~sD~~A~~lA~~L~Ad~Li~~TDVdGVy~~dP~~p~a~~i~~is~~e~~~~~~~g~~~~~~~ggM 239 (716)
. +..|..+ +|+|++|++||.+|+||+|+|+|||||||++ | +++|++++++|+.+++.. .+++|||
T Consensus 148 ~-----~~~g~~~~~~~D~~A~~lA~~l~a~~li~ltdv~Gv~~~-~----~~~i~~i~~~e~~~~~~~----~~~~ggm 213 (256)
T cd04238 148 V-----DEDGETYNVNADTAAGAIAAALKAEKLILLTDVPGVLDD-P----GSLISELTPKEAEELIED----GVISGGM 213 (256)
T ss_pred E-----CCCCcEEEECHHHHHHHHHHHcCCCEEEEEeCCccccCC-C----CCccccCCHHHHHHHHHc----CCCCCCh
Confidence 1 1244454 9999999999999999999999999999987 3 789999999999886643 3789999
Q ss_pred HHHHHHHHHHHHcCCc-EEEeeCCCcchHHHHhcC-CcceeEE
Q 005047 240 TAKVNAAYCAACAGIP-VVITSGFAMDSIIKVLEG-KRVGTLF 280 (716)
Q Consensus 240 ~~Kl~aa~~a~~~gi~-v~I~~g~~~~~l~~~~tg-~~iGT~i 280 (716)
.+|+++|..++++|++ |+|+||+.|++|...+.+ +..||++
T Consensus 214 ~~Kl~~a~~~~~~g~~~v~I~~g~~~~~l~~~l~~~~~~GT~i 256 (256)
T cd04238 214 IPKVEAALEALEGGVRKVHIIDGRVPHSLLLELFTDEGIGTMI 256 (256)
T ss_pred HHHHHHHHHHHHhCCCEEEEeCCCCCcHHHHHHhcCCCCCCCC
Confidence 9999999999999886 999999999999777665 5678863
No 169
>cd04251 AAK_NAGK-UC AAK_NAGK-UC: N-Acetyl-L-glutamate kinase - uncharacterized (NAGK-UC). This domain is similar to Escherichia coli and Pseudomonas aeruginosa NAGKs which catalyze the phosphorylation of the gamma-COOH group of N-acetyl-L-glutamate (NAG) by ATP in the second step of microbial arginine biosynthesis. These uncharacterized domain sequences are found in some bacteria (Deinococci and Chloroflexi) and archea and belong to the Amino Acid Kinase Superfamily (AAK).
Probab=99.95 E-value=1.3e-27 Score=247.61 Aligned_cols=224 Identities=26% Similarity=0.359 Sum_probs=159.6
Q ss_pred EEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhcccCCccc------ccccccch
Q 005047 17 LVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLAD------LQKPQNEL 90 (716)
Q Consensus 17 iVIKiGGs~l~~~~~~~~~~~~~~~a~~I~~l~~~G~~vvIVhGGg~~i~~~~~~~~~~~~~~~~~------~~~~~~~l 90 (716)
+|||||||++++ +.+++++|+.+ |.++|||||||+++...+ .. .++++.|.+ .+.+..+-
T Consensus 1 ~VIKlGGs~l~~---------~~~~~~~i~~l---g~~~VlVHGgg~~i~~~~-~~-~gi~~~~~~~~~G~~~Rvt~~~~ 66 (257)
T cd04251 1 IVVKIGGSVVSD---------LDKVIDDIANF---GERLIVVHGGGNYVNEYL-KR-LGVEPKFVTSPSGIRSRYTDKET 66 (257)
T ss_pred CEEEEChHHhhC---------hHHHHHHHHHc---CCCEEEECCCHHHHHHHH-HH-cCCCcEEEeCCCCCccccCCHHH
Confidence 589999999985 36799999987 889999999988776644 22 344444431 11221110
Q ss_pred hHHHHHHhchHHHHHHHHHHhccCCCccceEEec------------------------CccCCchhhHhHHHHHHHHHHh
Q 005047 91 DGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVT------------------------DSDFRDEDFRKQLYDTVQSLLD 146 (716)
Q Consensus 91 ~~~~~~a~g~~~~~~~~~~~l~~~gi~~~~~~~~------------------------~~~~~~~~~~~~~~~~i~~ll~ 146 (716)
-.....+++... ..+...|.+.|+++..+.-. +.+|.. .....+.+.|+.+|+
T Consensus 67 l~~~~~a~~~ln--~~iv~~L~~~Gi~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~G-~v~~v~~~~i~~ll~ 143 (257)
T cd04251 67 LEVFVMVMGLIN--KKIVARLHSLGVKAVGLTGLDGRLLEAKRKEIVRVNERGRKMIIRGGYTG-KVEKVNSDLIEALLD 143 (257)
T ss_pred HHHHHHHHHHHH--HHHHHHHHhCCCCceecccccCCEEEEEEeecccccccCcccccCCcceE-EEEEEcHHHHHHHHh
Confidence 011223333322 22334666666654322110 001110 112356799999999
Q ss_pred CCCeEEeeCCCceecCCCCCCCCCcee-ecchHHHHHHHhhcCCCEEEEeecCCccccCCCcccccccccccchhchHHH
Q 005047 147 LRVIPIFNENDAVSTRKAPYEDSSGIF-WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAE 225 (716)
Q Consensus 147 ~g~iPV~~g~d~v~~~~~~~~~~g~~~-~~sD~~A~~lA~~L~Ad~Li~~TDVdGVy~~dP~~p~a~~i~~is~~e~~~~ 225 (716)
.|+|||+++ . .++..|..+ +|+|++|+.+|.+|+|++|+|+|||||||++ +++|++|+++|+.++
T Consensus 144 ~g~vpVi~~--~------~~~~~G~~~~i~~D~~A~~lA~~L~A~~li~~tdv~Gv~~~------~~~i~~i~~~e~~~l 209 (257)
T cd04251 144 AGYLPVVSP--V------AYSEEGEPLNVDGDRAAAAIAAALKAERLILLTDVEGLYLD------GRVIERITVSDAESL 209 (257)
T ss_pred CCCeEEEeC--c------EECCCCcEEecCHHHHHHHHHHHcCCCEEEEEeCChhheeC------CcccCccCHHHHHHH
Confidence 999999964 2 222355666 9999999999999999999999999999975 789999999999876
Q ss_pred HhcCCCCCcccCCcHHHHHHHHHHHHcCCc-EEEeeCCCcchHHHHhcCCcceeE
Q 005047 226 ITFGDKSRVGRGGMTAKVNAAYCAACAGIP-VVITSGFAMDSIIKVLEGKRVGTL 279 (716)
Q Consensus 226 ~~~g~~~~~~~ggM~~Kl~aa~~a~~~gi~-v~I~~g~~~~~l~~~~tg~~iGT~ 279 (716)
+. +++|||.+|+++|..++++|++ |||+||+.|+++..++.|+ ||.
T Consensus 210 ~~------~~~ggm~~Kl~aa~~a~~~gv~~v~i~~g~~~~~l~~~l~g~--gT~ 256 (257)
T cd04251 210 LE------KAGGGMKRKLLAAAEAVEGGVREVVIGDARADSPISSALNGG--GTV 256 (257)
T ss_pred Hh------hCCCchHHHHHHHHHHHHcCCCEEEEecCCCccHHHHHHcCC--CcC
Confidence 62 5899999999999999999996 9999999999999988774 775
No 170
>cd04246 AAK_AK-DapG-like AAK_AK-DapG-like: Amino Acid Kinase Superfamily (AAK), AK-DapG-like; this CD includes the N-terminal catalytic aspartokinase (AK) domain of the diaminopimelate-sensitive aspartokinase isoenzyme AKI (DapG), a monofunctional enzymes found in Bacilli (Bacillus subtilis 168), Clostridia, and Actinobacteria bacterial species, as well as, the catalytic AK domain of the lysine-sensitive aspartokinase isoenzyme AKII of Bacillus subtilis 168, the lysine plus threonine-sensitive aspartokinase of Corynebacterium glutamicum, and related isoenzymes. In Bacillus subtilis, the regulation of the diaminopimelate-lysine biosynthetic pathway involves dual control by diaminopimelate and lysine, effected through separate diaminopimelate- and lysine-sensitive aspartokinase isoenzymes. The role of the AKI isoenzyme is most likely to provide a constant level of aspartyl-beta-phosphate for the biosynthesis of diaminopimelate for peptidoglycan synthesis and dipicolinate during sporulati
Probab=99.95 E-value=2.1e-27 Score=244.03 Aligned_cols=222 Identities=18% Similarity=0.247 Sum_probs=168.2
Q ss_pred eEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhcccCCcccccccccchhHHHH
Q 005047 16 RLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKAC 95 (716)
Q Consensus 16 ~iVIKiGGs~l~~~~~~~~~~~~~~~a~~I~~l~~~G~~vvIVhGGg~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 95 (716)
.+||||||+++.+. +.+.+++++|+.+++.|+++||||||++..+..+++.... ...+.+.. ..+.+
T Consensus 1 ~iViK~GGs~l~~~------~~~~~~~~~i~~l~~~g~~~viV~sg~g~~~~~ll~~~~~-~~~~~~~~------~~~~i 67 (239)
T cd04246 1 IIVQKFGGTSVADI------ERIKRVAERIKKAVKKGYQVVVVVSAMGGTTDELIGLAKE-VSPRPSPR------ELDML 67 (239)
T ss_pred CEEEEECccccCCH------HHHHHHHHHHHHHHHcCCCEEEEECCCCchHHHHHHHHHH-hccCCCHH------HHHHH
Confidence 47999999999864 3589999999999999999999999766555555443221 11111111 12467
Q ss_pred HHhchHHHHHHHHHHhccCCCccceE------EecCccCCchhhHhHHHHHHHHHHhCCCeEEeeCCCceecCCCCCCCC
Q 005047 96 AAVGQSSLMALYDTLFSQLDVTSSQL------LVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDS 169 (716)
Q Consensus 96 ~a~g~~~~~~~~~~~l~~~gi~~~~~------~~~~~~~~~~~~~~~~~~~i~~ll~~g~iPV~~g~d~v~~~~~~~~~~ 169 (716)
.++|+..+..++...|..+|+++..+ +++.+++.+......+.+.+.+++++|.|||++|. . +...+
T Consensus 68 ~~~Ge~~~~~~~~~~l~~~g~~a~~l~~~~~~l~~~~~~~~~~~~~~~~~~l~~ll~~g~ipVi~g~-~------~~~~~ 140 (239)
T cd04246 68 LSTGEQISAALLAMALNRLGIKAISLTGWQAGILTDDHHGNARIIDIDPKRILEALEEGDVVVVAGF-Q------GVNED 140 (239)
T ss_pred HHHhHHHHHHHHHHHHHhCCCCeEEeccccCCEEecCCCCceeechhhHHHHHHHHhcCCEEEEcCc-c------ccCCC
Confidence 78898888778889999999886543 23333343222233457899999999999999872 1 11113
Q ss_pred Ccee----ecchHHHHHHHhhcCCCEEEEeecCCccccCCC-cccccccccccchhchHHHHhcCCCCCcccCCcHHHHH
Q 005047 170 SGIF----WDNDSLAGLLALELKADLLVLLSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVN 244 (716)
Q Consensus 170 g~~~----~~sD~~A~~lA~~L~Ad~Li~~TDVdGVy~~dP-~~p~a~~i~~is~~e~~~~~~~g~~~~~~~ggM~~Kl~ 244 (716)
+..+ +++|++|+.+|.+|+|++|+++|||||||++|| .+|++++|++|+++|+.++... |.+..|++
T Consensus 141 g~~~~l~~g~~D~~A~~lA~~l~A~~li~~tdV~GVy~~dP~~~~~a~~i~~l~~~e~~~l~~~--------G~~~~~~~ 212 (239)
T cd04246 141 GEITTLGRGGSDTTAVALAAALKADRCEIYTDVDGVYTADPRIVPKARKLDVISYDEMLEMASL--------GAKVLHPR 212 (239)
T ss_pred CCEEecCCCChHHHHHHHHHHcCCCEEEEEECCCCCCCCCCCCCCCCeEcccCCHHHHHHHHhC--------CCcccCHH
Confidence 3332 489999999999999999999999999999999 5799999999999999886643 55678899
Q ss_pred HHHHHHHcCCcEEEeeCCCcc
Q 005047 245 AAYCAACAGIPVVITSGFAMD 265 (716)
Q Consensus 245 aa~~a~~~gi~v~I~~g~~~~ 265 (716)
++..+.++|+|++|.|++.|+
T Consensus 213 a~~~a~~~gi~i~i~~~~~~~ 233 (239)
T cd04246 213 SVELAKKYNVPLRVRSSFSEN 233 (239)
T ss_pred HHHHHHHCCCeEEEecCCCCC
Confidence 999999999999999998764
No 171
>cd04234 AAK_AK AAK_AK: Amino Acid Kinase Superfamily (AAK), Aspartokinase (AK); this CD includes the N-terminal catalytic domain of aspartokinase (4-L-aspartate-4-phosphotransferase;). AK is the first enzyme in the biosynthetic pathway of the aspartate family of amino acids (lysine, threonine, methionine, and isoleucine) and the bacterial cell wall component, meso-diaminopimelate. It also catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP. One mechanism for the regulation of this pathway is by the production of several isoenzymes of aspartokinase with different repressors and allosteric inhibitors. Pairs of ACT domains are proposed to specifically bind amino acids leading to allosteric regulation of the enzyme. In Escherichia coli, three different aspartokinase isoenzymes are regulated specifically by lysine, methionine, and threonine. AK-HSDHI (ThrA) and AK-HSDHII (MetL) are bifunctional enzymes that consist of an N-terminal AK and a C-terminal homoserine dehyd
Probab=99.95 E-value=3.3e-27 Score=240.36 Aligned_cols=208 Identities=21% Similarity=0.289 Sum_probs=167.6
Q ss_pred eEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhcccCCcccccccccchhHHHH
Q 005047 16 RLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKAC 95 (716)
Q Consensus 16 ~iVIKiGGs~l~~~~~~~~~~~~~~~a~~I~~l~~~G~~vvIVhGGg~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 95 (716)
++|+|||||++.+++ .+.+++++|+.+ +.|+++||||||++.+++.+.... .+
T Consensus 1 ~iViK~GGs~l~~~~------~~~~~~~~i~~l-~~g~~vvvV~Sg~~~~t~~l~~~~--------------------~~ 53 (227)
T cd04234 1 MVVQKFGGTSVASAE------RIKRVADIIKAY-EKGNRVVVVVSAMGGVTDLLIELA--------------------LL 53 (227)
T ss_pred CEEEEECccccCCHH------HHHHHHHHHHHh-hcCCCEEEEEcCCCcccHHHHHHH--------------------HH
Confidence 579999999998743 589999999999 889999999999998887664321 56
Q ss_pred HHhchHHHHHHHHHHhccCCCccc-----eEEecCccC-CchhhHhHHHHHHHHHHhC-CCeEEeeCCCceecCCCCCCC
Q 005047 96 AAVGQSSLMALYDTLFSQLDVTSS-----QLLVTDSDF-RDEDFRKQLYDTVQSLLDL-RVIPIFNENDAVSTRKAPYED 168 (716)
Q Consensus 96 ~a~g~~~~~~~~~~~l~~~gi~~~-----~~~~~~~~~-~~~~~~~~~~~~i~~ll~~-g~iPV~~g~d~v~~~~~~~~~ 168 (716)
.++|+..+..++...|...|+++. ++.++..++ ........+.+.++++++. |.|||++|+ .... .
T Consensus 54 ~s~Ge~~~~~l~~~~l~~~Gi~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~vpVv~g~-i~~~------~ 126 (227)
T cd04234 54 LSFGERLSARLLAAALRDRGIKARSLDARQAGITTDDNHGAARIIEISYERLKELLAEIGKVPVVTGF-IGRN------E 126 (227)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCeEEeCHHHCCEEcCCccchhhHHHHHHHHHHHHHhhCCCEEEecCc-eecC------C
Confidence 789999888889999999998875 444444443 2233344667899999999 999999872 1111 1
Q ss_pred CCce--e--ecchHHHHHHHhhcCCCEEEEeecCCccccCCC-cccccccccccchhchHHHHhcCCCCCcccCCcHHHH
Q 005047 169 SSGI--F--WDNDSLAGLLALELKADLLVLLSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKV 243 (716)
Q Consensus 169 ~g~~--~--~~sD~~A~~lA~~L~Ad~Li~~TDVdGVy~~dP-~~p~a~~i~~is~~e~~~~~~~g~~~~~~~ggM~~Kl 243 (716)
+|.. + +++|++|+++|.+|+||+|+++|||||||++|| .+|++++|++|+++|+.++...| .++| |+
T Consensus 127 ~g~~~~l~rg~sD~~A~~lA~~l~A~~l~~~tdV~Gvy~~dP~~~~~a~~i~~i~~~e~~~l~~~G------~~~~--~~ 198 (227)
T cd04234 127 DGEITTLGRGGSDYSAAALAAALGADEVEIWTDVDGIYTADPRIVPEARLIPEISYDEALELAYFG------AKVL--HP 198 (227)
T ss_pred CCCEEEeeCCCcHHHHHHHHHHhCCCEEEEEECCCccCCCCCCCCCCceEcCcCCHHHHHHHHhCC------cccc--CH
Confidence 3333 2 479999999999999999999999999999999 48999999999999998876543 4455 67
Q ss_pred HHHHHHHHcCCcEEEeeCCCcc
Q 005047 244 NAAYCAACAGIPVVITSGFAMD 265 (716)
Q Consensus 244 ~aa~~a~~~gi~v~I~~g~~~~ 265 (716)
+++..+.++|++++|.|++.|+
T Consensus 199 ~a~~~a~~~~i~i~i~~~~~~~ 220 (227)
T cd04234 199 RAVEPARKANIPIRVKNTFNPE 220 (227)
T ss_pred HHHHHHHHcCCeEEEEeCCCCC
Confidence 9999999999999999998875
No 172
>cd04261 AAK_AKii-LysC-BS AAK_AKii-LysC-BS: Amino Acid Kinase Superfamily (AAK), AKii; this CD includes the N-terminal catalytic aspartokinase (AK) domain of the lysine-sensitive aspartokinase isoenzyme AKII of Bacillus subtilis 168, and the lysine plus threonine-sensitive aspartokinase of Corynebacterium glutamicum, and related sequences. In B. subtilis 168, the regulation of the diaminopimelate (Dap)-lysine biosynthetic pathway involves dual control by Dap and lysine, effected through separate Dap- and lysine-sensitive aspartokinase isoenzymes. The B. subtilis 168 AKII is induced by methionine, and repressed and inhibited by lysine. Although Corynebacterium glutamicum is known to contain a single aspartokinase isoenzyme type, both the succinylase and dehydrogenase variant pathways of DAP-lysine synthesis operate simultaneously in this organism. In this organism and other various Gram-positive bacteria, the DAP-lysine pathway is feedback regulated by the concerted action of lysine and
Probab=99.95 E-value=3.1e-27 Score=242.73 Aligned_cols=222 Identities=19% Similarity=0.278 Sum_probs=167.8
Q ss_pred eEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhcccCCcccccccccchhHHHH
Q 005047 16 RLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKAC 95 (716)
Q Consensus 16 ~iVIKiGGs~l~~~~~~~~~~~~~~~a~~I~~l~~~G~~vvIVhGGg~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 95 (716)
.+||||||+++.+. +.+.+++++|+.+++.|+++||||||++..+..+++...... ...+.+ ..+++
T Consensus 1 ~iViK~GGs~l~~~------~~~~~~~~~i~~l~~~g~~~vvV~sg~g~~~~~l~~~~~~~~-~~~~~~------~~~~i 67 (239)
T cd04261 1 LIVQKFGGTSVASI------ERIKRVAERIKKRKKKGNQVVVVVSAMGGTTDELIELAKEIS-PRPPAR------ELDVL 67 (239)
T ss_pred CEEEEECCcccCCH------HHHHHHHHHHHHHHHcCCCEEEEECCCCchhHHHHHHHHHhc-cCCCHH------HHHHH
Confidence 47999999999763 368999999999999999999999986666665543321110 000111 12467
Q ss_pred HHhchHHHHHHHHHHhccCCCccceE------EecCccCCchhhHhHHHHHHHHHHhCCCeEEeeCCCceecCCCCCCCC
Q 005047 96 AAVGQSSLMALYDTLFSQLDVTSSQL------LVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDS 169 (716)
Q Consensus 96 ~a~g~~~~~~~~~~~l~~~gi~~~~~------~~~~~~~~~~~~~~~~~~~i~~ll~~g~iPV~~g~d~v~~~~~~~~~~ 169 (716)
.++|+.....++...|..+|+++..+ +++.+++........+.+.+++++++|+|||++|. . +...+
T Consensus 68 ~a~Ge~~~~~l~~~~l~~~g~~a~~l~~~~~~l~~~~~~~~~~i~~~~~~~l~~ll~~~~ipVi~G~-~------~~~~~ 140 (239)
T cd04261 68 LSTGEQVSIALLAMALNRLGIKAISLTGWQAGILTDGHHGKARIIDIDPDRIRELLEEGDVVIVAGF-Q------GINED 140 (239)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCeEEechhhCCEEecCCCCcceechhhHHHHHHHHHcCCeEEEcCc-c------ccCCC
Confidence 78888888878889999998875432 33444553222223456899999999999999882 1 11113
Q ss_pred Ccee-e---cchHHHHHHHhhcCCCEEEEeecCCccccCCC-cccccccccccchhchHHHHhcCCCCCcccCCcHHHHH
Q 005047 170 SGIF-W---DNDSLAGLLALELKADLLVLLSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVN 244 (716)
Q Consensus 170 g~~~-~---~sD~~A~~lA~~L~Ad~Li~~TDVdGVy~~dP-~~p~a~~i~~is~~e~~~~~~~g~~~~~~~ggM~~Kl~ 244 (716)
+... + ++|++|+.+|.+|+||+|+++|||||||++|| .+|++++|++|+++|+.++... |.+..|++
T Consensus 141 g~~~~l~rg~sD~~A~~lA~~l~A~~lii~tdV~GVy~~dP~~~~~a~~i~~i~~~ea~~l~~~--------G~~~~~~~ 212 (239)
T cd04261 141 GDITTLGRGGSDTSAVALAAALGADRCEIYTDVDGVYTADPRIVPKARKLDEISYDEMLEMASL--------GAKVLHPR 212 (239)
T ss_pred CCEEecCCCChHHHHHHHHHHcCCCEEEEEeCCCCCCCCCCCCCCCceEccccCHHHHHHHHhc--------cccccCHH
Confidence 3332 4 99999999999999999999999999999999 4789999999999999886553 45678899
Q ss_pred HHHHHHHcCCcEEEeeCCCcc
Q 005047 245 AAYCAACAGIPVVITSGFAMD 265 (716)
Q Consensus 245 aa~~a~~~gi~v~I~~g~~~~ 265 (716)
++..+.++|++++|.|++.|+
T Consensus 213 a~~~~~~~~i~i~I~n~~~~~ 233 (239)
T cd04261 213 SVELAKKYGVPLRVLSSFSEE 233 (239)
T ss_pred HHHHHHHcCCeEEEecCCCCC
Confidence 999999999999999998874
No 173
>TIGR00761 argB acetylglutamate kinase. This model describes N-acetylglutamate kinases (ArgB) of many prokaryotes and the N-acetylglutamate kinase domains of multifunctional proteins from yeasts. This enzyme is the second step in the "acetylated" ornithine biosynthesis pathway. A related group of enzymes representing the first step of the pathway contain a homologous domain and are excluded from this model.
Probab=99.95 E-value=4.4e-27 Score=240.53 Aligned_cols=215 Identities=27% Similarity=0.342 Sum_probs=151.9
Q ss_pred eEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhcccCCccc-ccccccc-hhHH
Q 005047 16 RLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLAD-LQKPQNE-LDGK 93 (716)
Q Consensus 16 ~iVIKiGGs~l~~~~~~~~~~~~~~~a~~I~~l~~~G~~vvIVhGGg~~i~~~~~~~~~~~~~~~~~-~~~~~~~-l~~~ 93 (716)
++||||||++++++ +.+++++|+.+++.|.++||||||++++... +..+ +....+.+ ++.+... +...
T Consensus 1 ~~ViK~GGs~l~~~--------~~~~~~~i~~l~~~g~~~VlVhggg~~~~~~-~~~~-~~~~~~~~g~r~t~~~~~~~~ 70 (231)
T TIGR00761 1 TIVIKIGGAAISDL--------LEAFASDIAFLRAVGIKPVIVHGGGPEINEL-LEAL-GIPPEFKNGLRVTDKETLEVV 70 (231)
T ss_pred CEEEEEChHHHhcc--------HHHHHHHHHHHHHcCCCEEEEcCCcHHHHHH-HHHc-CCCCEecCCCccCCHHHHHHH
Confidence 58999999999874 6899999999999999999999988765543 3322 22222221 1211100 0000
Q ss_pred HHHHhchHHHHHHHHHHhccCCCccceE------EecCc-----cCCchhh-HhHHHHHHHHHHhCCCeEEeeCCCceec
Q 005047 94 ACAAVGQSSLMALYDTLFSQLDVTSSQL------LVTDS-----DFRDEDF-RKQLYDTVQSLLDLRVIPIFNENDAVST 161 (716)
Q Consensus 94 ~~~a~g~~~~~~~~~~~l~~~gi~~~~~------~~~~~-----~~~~~~~-~~~~~~~i~~ll~~g~iPV~~g~d~v~~ 161 (716)
.....|+.. ..+...|...|+++.++ +++.. ++...+. ...+.+.|+.+|+.|+|||++| .+
T Consensus 71 ~~~~~g~~~--~~i~~~L~~~G~~a~~l~~~~~~~it~~~~~~~~~~~~g~i~~i~~~~i~~~l~~g~IPVi~~-~~--- 144 (231)
T TIGR00761 71 EMVLIGQVN--KELVALLNKHGINAIGLTGGDGQLFTARSLDKEDLGYVGEIKKVNKALLEALLKAGYIPVISS-LA--- 144 (231)
T ss_pred HHHHhcchH--HHHHHHHHhCCCCcccccCCCCCEEEEEECCCccCCcccceEEEcHHHHHHHHHCCCeEEECC-Cc---
Confidence 111133322 23345777777766543 23321 2222222 2245789999999999999987 21
Q ss_pred CCCCCCCCCcee-ecchHHHHHHHhhcCCCEEEEeecCCccccCCCcccccccccccchhchHHHHhcCCCCCcccCCcH
Q 005047 162 RKAPYEDSSGIF-WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMT 240 (716)
Q Consensus 162 ~~~~~~~~g~~~-~~sD~~A~~lA~~L~Ad~Li~~TDVdGVy~~dP~~p~a~~i~~is~~e~~~~~~~g~~~~~~~ggM~ 240 (716)
.+..|..+ +|+|++|+.||.+|+|++|+|+|||||||++|| +++|++|+++|+.+++.. .+++|||.
T Consensus 145 ----~~~~g~~~~l~sD~~A~~lA~~l~A~~li~ltdv~Gv~~~d~----~~~i~~i~~~e~~~l~~~----~~~tggm~ 212 (231)
T TIGR00761 145 ----LTAEGQALNVNADTAAGALAAALGAEKLVLLTDVPGILNGDG----QSLISEIPLEEIEQLIEQ----GIITGGMI 212 (231)
T ss_pred ----cCCCCcEEEeCHHHHHHHHHHHcCCCEEEEEECCCCeecCCC----CeeccccCHHHHHHHHHc----CCCCCchH
Confidence 22245555 999999999999999999999999999999977 579999999999887754 37899999
Q ss_pred HHHHHHHHHHHcCCc-EEE
Q 005047 241 AKVNAAYCAACAGIP-VVI 258 (716)
Q Consensus 241 ~Kl~aa~~a~~~gi~-v~I 258 (716)
+||++|..++++|++ |||
T Consensus 213 ~Kl~~a~~a~~~gv~~v~i 231 (231)
T TIGR00761 213 PKVNAALEALRGGVKSVHI 231 (231)
T ss_pred HHHHHHHHHHHcCCCEEEC
Confidence 999999999999998 775
No 174
>TIGR02075 pyrH_bact uridylate kinase. This protein, also called UMP kinase, converts UMP to UDP by adding a phosphate from ATP. It is the first step in pyrimidine biosynthesis. GTP is an allosteric activator. In a large fraction of all bacterial genomes, the gene tends to be located immediately downstream of elongation factor Ts and upstream of ribosome recycling factor. A related protein family, believed to be equivalent in function and found in the archaea and in spirochetes, is described by a separate model, TIGR02076.
Probab=99.95 E-value=1.8e-26 Score=235.79 Aligned_cols=229 Identities=19% Similarity=0.273 Sum_probs=167.4
Q ss_pred cCeEEEEeCCcccccCCC-cccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHh-hHHHhhhhhcccCCcccccccccchh
Q 005047 14 VKRLVVKVGTAVVTRSDG-RLALGRLGALLEQLKELNSQGFEIILVSSGAVGV-GRQRLRYRKLVNSSLADLQKPQNELD 91 (716)
Q Consensus 14 ~~~iVIKiGGs~l~~~~~-~~~~~~~~~~a~~I~~l~~~G~~vvIVhGGg~~i-~~~~~~~~~~~~~~~~~~~~~~~~l~ 91 (716)
++++|||||||+|++... +++.+.+++++++|+++...|+++|||||||..+ ++. .+.+. .. +. .+
T Consensus 1 ~~~iViKlGGs~i~~~~~~~~~~~~i~~~a~~i~~~~~~~~~vviV~G~Gs~~~~~~-a~~~~-~~----~~-----~~- 68 (233)
T TIGR02075 1 YKRVLLKLSGEALAGESGFGIDPDRLNRIANEIKELVKMGIEVGIVIGGGNIFRGVS-AKELG-ID----RV-----TA- 68 (233)
T ss_pred CCEEEEEeChhhcCCCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEECCCHHHHHHH-HHhcC-CC----Cc-----cH-
Confidence 478999999999998322 5788899999999999998889999999886433 443 22221 11 10 01
Q ss_pred HHHHHHhchHHHHHHHHHHhccCCCccceEEecCccCCchhhHhHHHHHHHHHHhCCCeEEeeCCCceecCCCCCCCCCc
Q 005047 92 GKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSG 171 (716)
Q Consensus 92 ~~~~~a~g~~~~~~~~~~~l~~~gi~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~g~iPV~~g~d~v~~~~~~~~~~g~ 171 (716)
+.+.+.++.....++...|...|+++.. ++..++.. .......+.+++++++|+|||+.|. .|.
T Consensus 69 -d~~g~~~~~l~~~l~~~~L~~~Gi~a~~--l~~~~~~~-~~~~~~~~~i~~ll~~g~VpV~~g~------------~g~ 132 (233)
T TIGR02075 69 -DYMGMLATVINGLALRDALEKLGVKTRV--LSAISMPQ-ICESYIRRKAIKHLEKGKVVIFSGG------------TGN 132 (233)
T ss_pred -HHHHHHHHHHHHHHHHHHHHhCCCCcEE--eccccCCC-CccccCHHHHHHHHHCCCEEEEECC------------CCC
Confidence 1222333333333456888888887632 22222210 0001124788899999999999761 223
Q ss_pred eeecchHHHHHHHhhcCCCEEEEeec-CCccccCCC-cccccccccccchhchHHHHhcCCCCCcccCCcHHHHHHHHHH
Q 005047 172 IFWDNDSLAGLLALELKADLLVLLSD-VEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCA 249 (716)
Q Consensus 172 ~~~~sD~~A~~lA~~L~Ad~Li~~TD-VdGVy~~dP-~~p~a~~i~~is~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a 249 (716)
.++++|++|+++|..|+||.|+++|| |||||++|| .+|++++|++++++|+.+. +. ...++.++..|
T Consensus 133 ~~~s~D~~a~~lA~~l~a~~li~~td~VdGvy~~dp~~~~~a~~i~~i~~~e~~~~---~~--------~~~d~~~~~~a 201 (233)
T TIGR02075 133 PFFTTDTAAALRAIEINADVILKGTNGVDGVYTADPKKNKDAKKYETITYNEALKK---NL--------KVMDLTAFALA 201 (233)
T ss_pred CCCCchHHHHHHHHHcCCCEEEEeecccCeEEcCCCCCCCCCeECcEecHHHHHhc---CH--------HHHHHHHHHHH
Confidence 45889999999999999999999999 999999999 5899999999999887542 11 13467888888
Q ss_pred HHcCCcEEEeeCCCcchHHHHhcCCcceeEEe
Q 005047 250 ACAGIPVVITSGFAMDSIIKVLEGKRVGTLFH 281 (716)
Q Consensus 250 ~~~gi~v~I~~g~~~~~l~~~~tg~~iGT~i~ 281 (716)
.++|++++|+||.+|++|.+++.|+..||++.
T Consensus 202 ~~~~i~v~i~~g~~~~~l~~~l~g~~~GT~i~ 233 (233)
T TIGR02075 202 RDNNLPIVVFNIDEPGALKKVILGKGIGTLVS 233 (233)
T ss_pred HHCCCeEEEEeCCCcchHHHHHCCCCCCEEeC
Confidence 99999999999999999999999998999863
No 175
>cd04255 AAK_UMPK-MosAB AAK_UMPK-MosAB: This CD includes the alpha and beta subunits of the Mo storage protein (MosA and MosB) which are related to uridine monophosphate kinase (UMPK) enzymes that catalyze the phosphorylation of UMP by ATP, yielding UDP, and playing a key role in pyrimidine nucleotide biosynthesis. The Mo storage protein from the nitrogen-fixing bacterium, Azotobacter vinelandii, is characterized as an alpha4-beta4 octamer containing a polynuclear molybdenum-oxide cluster which is ATP-dependent to bind Mo and pH-dependent to release Mo. These and related bacterial sequences in this CD are members of the Amino Acid Kinase Superfamily (AAK).
Probab=99.95 E-value=1.8e-26 Score=238.04 Aligned_cols=227 Identities=20% Similarity=0.251 Sum_probs=163.9
Q ss_pred eEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhcccCCcccccccccchhHHHH
Q 005047 16 RLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKAC 95 (716)
Q Consensus 16 ~iVIKiGGs~l~~~~~~~~~~~~~~~a~~I~~l~~~G~~vvIVhGGg~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 95 (716)
.+|||||||+|++++ .+.+.+++++|+++.+ +++++||||||. ++|....... ..+ + ....+.++.+
T Consensus 32 ~~ViKiGGSvitdk~----~~~i~~la~~i~~~~~-~~~vilV~GGG~-~~r~~~~~~~--~~g---~--~~~~~~~~~~ 98 (262)
T cd04255 32 LNVVKIGGQSIIDRG----AEAVLPLVEEIVALRP-EHKLLILTGGGT-RARHVYSIGL--DLG---M--PTGVLAKLGA 98 (262)
T ss_pred cEEEEeccceecCCc----HHHHHHHHHHHHHHhC-CCcEEEEECCHH-HHHHHHHHHH--HcC---C--CchHHHHHHH
Confidence 589999999999875 4679999999999877 689999999866 5564332111 101 1 0111234566
Q ss_pred HHhchHHHHHHHHHHhccCCCccceEEecCccCCchhhHhHHHHHHHHHHhCCCeEEeeCCCceecCCCCCCCCCc--ee
Q 005047 96 AAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSG--IF 173 (716)
Q Consensus 96 ~a~g~~~~~~~~~~~l~~~gi~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~g~iPV~~g~d~v~~~~~~~~~~g~--~~ 173 (716)
++.+++.+. .+.+|..+|++. ++..+ ...++++|+.|+|||++|++.+....+. ..++ .+
T Consensus 99 aa~~ln~lv--~~~~l~~~g~~~----i~~~~----------~~~l~~lL~~g~vPVi~g~~~~~~~~i~--~~~g~~~~ 160 (262)
T cd04255 99 SVSEQNAEM--LATLLAKHGGSK----VGHGD----------LLQLPTFLKAGRAPVISGMPPYGLWEHP--AEEGRIPP 160 (262)
T ss_pred HHHHHHHHH--HHHHHHHcCCCc----ccccc----------HHHHHHHHHCCCeEEEeCCcCCCeeeec--CCCccCCC
Confidence 666665543 246666666643 22222 2368899999999999997644332111 1233 35
Q ss_pred ecchHHHHHHHhhcCCCEEEEeecCCccccCCC-cccccccccccchhchHHHHhcCCCCCcccCCcHHHHHHHHHHHHc
Q 005047 174 WDNDSLAGLLALELKADLLVLLSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACA 252 (716)
Q Consensus 174 ~~sD~~A~~lA~~L~Ad~Li~~TDVdGVy~~dP-~~p~a~~i~~is~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a~~~ 252 (716)
+|+|++|+++|.+|+||+|+++|||||||++|| ++|++++|++|+++++.+..... ...+++|..|++++ +.
T Consensus 161 ~~~D~~Aa~lA~~l~ad~li~~TdVdGVy~~dP~~~~~a~~i~~i~~~~~~~~~~~~---~~~~~~~~~~l~aa----~~ 233 (262)
T cd04255 161 HRTDVGAFLLAEVIGARNLIFVKDEDGLYTADPKKNKKAEFIPEISAAELLKKDLDD---LVLERPVLDLLQNA----RH 233 (262)
T ss_pred CCcHHHHHHHHHHhCCCEEEEEeccCeeECCCCCCCCCCeEccEeCHHHHHHHhcCC---CCCcHHHHHHHHHh----CC
Confidence 999999999999999999999999999999999 58999999999998876643111 12467777776654 33
Q ss_pred CCcEEEeeCCCcchHHHHhcCCcceeEE
Q 005047 253 GIPVVITSGFAMDSIIKVLEGKRVGTLF 280 (716)
Q Consensus 253 gi~v~I~~g~~~~~l~~~~tg~~iGT~i 280 (716)
.++++|+||+.|+++.+++.|+..||++
T Consensus 234 ~~~v~I~~g~~~~~L~~~l~g~~~GT~i 261 (262)
T cd04255 234 VKEVQIVNGLVPGNLTRALRGEHVGTII 261 (262)
T ss_pred CCcEEEEeCCCCCHHHHHHcCCCCceEe
Confidence 4689999999999999999999899986
No 176
>PRK14556 pyrH uridylate kinase; Provisional
Probab=99.95 E-value=1.6e-26 Score=233.35 Aligned_cols=240 Identities=17% Similarity=0.232 Sum_probs=172.5
Q ss_pred CchhhhHHhhcccCeEEEEeCCcccccCCC-cccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhh-hcccCC
Q 005047 2 DSTDSSRAFVKDVKRLVVKVGTAVVTRSDG-RLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYR-KLVNSS 79 (716)
Q Consensus 2 ~~~~~~~~~~~~~~~iVIKiGGs~l~~~~~-~~~~~~~~~~a~~I~~l~~~G~~vvIVhGGg~~i~~~~~~~~-~~~~~~ 79 (716)
||.+.++.+ +++|++|+|+||++|..+++ .++.+.+..++++|+.+.+.|+++.||.|||+.+.. ..... .+
T Consensus 4 ~~~~~~~~~-~~~~rvllKlsGe~l~~~~~~~~d~~~~~~~a~~i~~~~~~g~~i~iVvGGGni~Rg-~~~~~~~~---- 77 (249)
T PRK14556 4 DSSECSQKL-PKLKRILLKLSGESLSADQGFGINVESAQPIINQIKTLTNFGVELALVVGGGNILRG-GRANFGNK---- 77 (249)
T ss_pred CCcccchhh-hhhCEEEEEEehhhCcCCCCCCcCHHHHHHHHHHHHHHHhCCcEEEEEECCCHHHhC-chhhccCC----
Confidence 444445555 67899999999999986554 588889999999999999999999999999885432 11111 11
Q ss_pred cccccccccchhHHHHHHhchHHHHHHHHHHhccCCCccceEEec--CccCCchhhHhHHHHHHHHHHhCCCeEEeeCCC
Q 005047 80 LADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVT--DSDFRDEDFRKQLYDTVQSLLDLRVIPIFNEND 157 (716)
Q Consensus 80 ~~~~~~~~~~l~~~~~~a~g~~~~~~~~~~~l~~~gi~~~~~~~~--~~~~~~~~~~~~~~~~i~~ll~~g~iPV~~g~d 157 (716)
++... .+...+.+--.+. .++...|...|+++. ++.. ...+ .+++ +.+.+.+.++.|.|+|+.|
T Consensus 78 ---~~r~~--~D~~GmlaT~iNa--l~l~~~l~~~~~~~~-v~sa~~~~~~--~e~~--~~~~~~~~l~~g~vvi~~g-- 143 (249)
T PRK14556 78 ---IRRAT--ADSMGMIATMINA--LALRDMLISEGVDAE-VFSAKGVDGL--LKVA--SAHEFNQELAKGRVLIFAG-- 143 (249)
T ss_pred ---Cchhh--hhHHHHHHHHHHH--HHHHHHHHHcCCCeE-EeeccccCcC--CCCC--CHHHHHHHHhCCCEEEEEC--
Confidence 11110 0011111111111 134577777787643 2211 1122 2223 2456677899999999876
Q ss_pred ceecCCCCCCCCCceeecchHHHHHHHhhcCCCEEEEeecCCccccCCC-cccccccccccchhchHHHHhcCCCCCccc
Q 005047 158 AVSTRKAPYEDSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGDKSRVGR 236 (716)
Q Consensus 158 ~v~~~~~~~~~~g~~~~~sD~~A~~lA~~L~Ad~Li~~TDVdGVy~~dP-~~p~a~~i~~is~~e~~~~~~~g~~~~~~~ 236 (716)
. .|.+++++|++|+++|.+++||.|+++|||||||++|| ++|+++++++|++.|+.+. + .
T Consensus 144 ---g-------~G~p~~StD~lAallA~~l~Ad~Lii~TdVDGVYd~DP~~~p~A~~i~~I~~~e~~~~---~------l 204 (249)
T PRK14556 144 ---G-------TGNPFVTTDTTASLRAVEIGADALLKATTVNGVYDKDPNKYSDAKRFDKVTFSEVVSK---E------L 204 (249)
T ss_pred ---C-------CCCCcCCcHHHHHHHHHHcCCCEEEEEeCCCccCCCCCCCCCCceEeeEEchhhhccc---c------h
Confidence 1 34567999999999999999999999999999999999 5999999999999887541 1 0
Q ss_pred CCcHHHHHHHHHHHHcCCcEEEeeCCCcchHHHHhcCCcceeEEec
Q 005047 237 GGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHR 282 (716)
Q Consensus 237 ggM~~Kl~aa~~a~~~gi~v~I~~g~~~~~l~~~~tg~~iGT~i~~ 282 (716)
. ..+..++..+.++|++++|+|++.|++|.+++.|+..||++..
T Consensus 205 ~--vmd~~A~~~a~~~gIpi~I~ng~~~~~L~~~l~Ge~~GT~i~~ 248 (249)
T PRK14556 205 N--VMDLGAFTQCRDFGIPIYVFDLTQPNALVDAVLDSKYGTWVTL 248 (249)
T ss_pred H--hHHHHHHHHHHHCCCcEEEECCCCchHHHHHHcCCCCceEEEe
Confidence 1 2245788888999999999999999999999999999999853
No 177
>cd04254 AAK_UMPK-PyrH-Ec UMP kinase (UMPK)-Ec, the microbial/chloroplast uridine monophosphate kinase (uridylate kinase) enzyme that catalyzes UMP phosphorylation and plays a key role in pyrimidine nucleotide biosynthesis; regulation of this process is via feed-back control and via gene repression of carbamoyl phosphate synthetase (the first enzyme of the pyrimidine biosynthesis pathway). The UMP kinase of E. coli (Ec) is known to function as a homohexamer, with GTP and UTP being allosteric effectors. Like other related enzymes (carbamate kinase, aspartokinase, and N-acetylglutamate kinase) the E. coli and most bacterial and chloroplast UMPKs (this CD) have a conserved, N-terminal, lysine residue proposed to function in the catalysis of the phosphoryl group transfer, whereas most archaeal UMPKs appear to lack this residue and the Pyrococcus furiosus structure has an additional Mg ion bound to the ATP molecule which is proposed to function as the catalysis instead. Members of this CD be
Probab=99.95 E-value=1.5e-26 Score=236.19 Aligned_cols=228 Identities=18% Similarity=0.267 Sum_probs=166.9
Q ss_pred CeEEEEeCCcccccCCC-cccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhcccCCcccccccccchhHH
Q 005047 15 KRLVVKVGTAVVTRSDG-RLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGK 93 (716)
Q Consensus 15 ~~iVIKiGGs~l~~~~~-~~~~~~~~~~a~~I~~l~~~G~~vvIVhGGg~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 93 (716)
+++|||||||++++|+. +++.+.+.+++++|+++...|+++|||||||..+.......+... +.. .+
T Consensus 1 ~~iViKlGGs~itdk~~~~~~~~~i~~~a~~i~~~~~~~~~~viVhGgG~~~~~~~~~~~~~~-------~~~-----~d 68 (231)
T cd04254 1 KRVLLKLSGEALAGENGFGIDPEVLNRIAREIKEVVDLGVEVAIVVGGGNIFRGASAAEAGMD-------RAT-----AD 68 (231)
T ss_pred CeEEEEeCceEECCCCCCCCCHHHHHHHHHHHHHHHHCCCcEEEEECCCcccccchhhhcCCC-------chh-----hh
Confidence 57999999999998863 568889999999999998888899999999754311111111110 000 01
Q ss_pred HHHHhchHHHHHHHHHHhccCCCccceEEecCccCCchhhHhHHHHHHHHHHhCCCeEEeeCCCceecCCCCCCCCCcee
Q 005047 94 ACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIF 173 (716)
Q Consensus 94 ~~~a~g~~~~~~~~~~~l~~~gi~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~g~iPV~~g~d~v~~~~~~~~~~g~~~ 173 (716)
.+..++......++...|...|+++..+... ++... ....+.+.+.++++.|+|||++|. .|.++
T Consensus 69 ~~g~~~~~~n~~ll~~~L~~~Gv~a~~l~~~--~~~~~-~~~~~~~~l~~~l~~g~ipV~~g~------------~G~~~ 133 (231)
T cd04254 69 YMGMLATVINALALQDALESLGVKTRVMSAI--PMQGV-AEPYIRRRAIRHLEKGRVVIFAGG------------TGNPF 133 (231)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCeEEEcHH--Hhhhh-hcccCHHHHHHHHHCCCEEEEECC------------cCCCC
Confidence 1222333333335667888888865432111 11000 011235789999999999999861 22234
Q ss_pred ecchHHHHHHHhhcCCCEEEEeecCCccccCCCc-ccccccccccchhchHHHHhcCCCCCcccCCcHHHHHHHHHHHHc
Q 005047 174 WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACA 252 (716)
Q Consensus 174 ~~sD~~A~~lA~~L~Ad~Li~~TDVdGVy~~dP~-~p~a~~i~~is~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a~~~ 252 (716)
+++|++|+++|.+|+|++|+++|||||||++||+ +|++++|++++++|+.+ .++ . ..++.++..|.++
T Consensus 134 ~~~D~~a~~lA~~l~a~~l~~~tdVdGvy~~dp~~~~~a~~i~~i~~~~~~~---~~~------~--~~d~~a~~~a~~~ 202 (231)
T cd04254 134 FTTDTAAALRAIEINADVILKATKVDGVYDADPKKNPNAKRYDHLTYDEVLS---KGL------K--VMDATAFTLCRDN 202 (231)
T ss_pred CCcHHHHHHHHHHcCCCEEEEEeCCCEEEecCCCCCCCcEEeeEecHHHHHh---cch------h--hhHHHHHHHHHHC
Confidence 7899999999999999999999999999999994 89999999999988754 121 1 3478888889889
Q ss_pred CCcEEEeeCCCcchHHHHhcCCcceeEE
Q 005047 253 GIPVVITSGFAMDSIIKVLEGKRVGTLF 280 (716)
Q Consensus 253 gi~v~I~~g~~~~~l~~~~tg~~iGT~i 280 (716)
|++++|+||+.|++|.+++.|+..||++
T Consensus 203 gi~~~I~~g~~~~~l~~~l~g~~~GT~i 230 (231)
T cd04254 203 NLPIVVFNINEPGNLLKAVKGEGVGTLI 230 (231)
T ss_pred CCeEEEEeCCCccHHHHHHCCCCCCEEe
Confidence 9999999999999999999998899986
No 178
>cd04260 AAK_AKi-DapG-BS AAK_AKi-DapG-BS: Amino Acid Kinase Superfamily (AAK), AKi-DapG; this CD includes the N-terminal catalytic aspartokinase (AK) domain of the diaminopimelate-sensitive aspartokinase isoenzyme AKI (DapG), a monofunctional class enzyme found in Bacilli (Bacillus subtilis 168), Clostridia, and Actinobacteria bacterial species. In Bacillus subtilis, the regulation of the diaminopimelate-lysine biosynthetic pathway involves dual control by diaminopimelate and lysine, effected through separate diaminopimelate- and lysine-sensitive aspartokinase isoenzymes. AKI activity is invariant during the exponential and stationary phases of growth and is not altered by addition of amino acids to the growth medium. The role of this isoenzyme is most likely to provide a constant level of aspartyl-beta-phosphate for the biosynthesis of diaminopimelate for peptidoglycan synthesis and dipicolinate during sporulation. The B. subtilis AKI is tetrameric consisting of two alpha and two bet
Probab=99.95 E-value=1.6e-26 Score=237.72 Aligned_cols=221 Identities=17% Similarity=0.213 Sum_probs=165.8
Q ss_pred eEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCC-----hhHhhHHHhhhhhcccCCcccccccccch
Q 005047 16 RLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSG-----AVGVGRQRLRYRKLVNSSLADLQKPQNEL 90 (716)
Q Consensus 16 ~iVIKiGGs~l~~~~~~~~~~~~~~~a~~I~~l~~~G~~vvIVhGG-----g~~i~~~~~~~~~~~~~~~~~~~~~~~~l 90 (716)
.+|||||||++++++ .+++++++|+.+.+.|.++||||+| ++.+++.+.+..... . .+... -
T Consensus 1 ~~ViK~GGs~l~~~~------~~~~~~~~I~~~~~~g~~~vvV~sa~g~~G~~~~~~~l~~~~~~~--~---~~~t~--~ 67 (244)
T cd04260 1 IIVQKFGGTSVSTKE------RREQVAKKVKQAVDEGYKPVVVVSAMGRKGDPYATDTLINLVYAE--N---SDISP--R 67 (244)
T ss_pred CEEEEECchhcCCHH------HHHHHHHHHHHHHHCCCCeEEEEECCCCCCCchHHHHHHHHHHhh--c---CCCCH--H
Confidence 379999999998864 4789999999999999988888854 444444333221110 0 11110 0
Q ss_pred hHHHHHHhchHHHHHHHHHHhccCCCccceE------EecCccCCchhhHhHHHHHHHHHHhCCCeEEeeCCCceecCCC
Q 005047 91 DGKACAAVGQSSLMALYDTLFSQLDVTSSQL------LVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKA 164 (716)
Q Consensus 91 ~~~~~~a~g~~~~~~~~~~~l~~~gi~~~~~------~~~~~~~~~~~~~~~~~~~i~~ll~~g~iPV~~g~d~v~~~~~ 164 (716)
..+.+.++|+..++.++...|..+|+++.++ +++.+++........+.+.+.++++.|+|||++| ++...
T Consensus 68 ~~~~~~~~Ge~~~~~~~~~~l~~~Gi~a~~l~~~~~~lit~~~~~~~~v~~~~~~~l~~ll~~g~VPVv~g-~~~~~--- 143 (244)
T cd04260 68 ELDLLMSCGEIISAVVLTSTLRAQGLKAVALTGAQAGILTDDNYSNAKIIKVNPKKILSALKEGDVVVVAG-FQGVT--- 143 (244)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHhCCCCeEEechHHcCEEecCCCCceeeeccCHHHHHHHHhCCCEEEecC-CcccC---
Confidence 1346788999998888999999999998776 3455555433322335678999999999999988 21111
Q ss_pred CCCCCCcee-e---cchHHHHHHHhhcCCCEEEEeecCCccccCCCc-ccccccccccchhchHHHHhcCCCCCcccCCc
Q 005047 165 PYEDSSGIF-W---DNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGM 239 (716)
Q Consensus 165 ~~~~~g~~~-~---~sD~~A~~lA~~L~Ad~Li~~TDVdGVy~~dP~-~p~a~~i~~is~~e~~~~~~~g~~~~~~~ggM 239 (716)
..|..+ + ++|++|+.+|.+|+|++|+++|||||||++||+ +|++++|++|+++|+.++...|++
T Consensus 144 ---~~g~~~~l~rg~sD~~A~~lA~~l~A~~l~~~tDV~GVy~~dP~~~~~a~~i~~i~~~e~~~l~~~g~~-------- 212 (244)
T cd04260 144 ---EDGEVTTLGRGGSDTTAAALGAALNAEYVEIYTDVDGIMTADPRVVPNARILDVVSYNEVFQMAHQGAK-------- 212 (244)
T ss_pred ---CCCCEEEeCCCchHHHHHHHHHHcCCCEEEEEECCCcCCcCCCCCCCCCeEcccCCHHHHHHHHHcCch--------
Confidence 133332 3 799999999999999999999999999999994 789999999999999988775532
Q ss_pred HHHHHHHHHHHHcCCcEEEeeCCCc
Q 005047 240 TAKVNAAYCAACAGIPVVITSGFAM 264 (716)
Q Consensus 240 ~~Kl~aa~~a~~~gi~v~I~~g~~~ 264 (716)
..|.+++..+.+++++++|.|++.|
T Consensus 213 v~~~~a~~~~~~~~i~v~I~~~~~~ 237 (244)
T cd04260 213 VIHPRAVEIAMQANIPIRIRSTMSE 237 (244)
T ss_pred hcCHHHHHHHHHcCCeEEEecCCCC
Confidence 3577899999999999999998865
No 179
>PF00696 AA_kinase: Amino acid kinase family Match to Glutamate-5-kinases, C-terminal end of the alignment Match to Aspartate kinases; InterPro: IPR001048 This entry contains proteins with various specificities and includes the aspartate, glutamate and uridylate kinase families. In prokaryotes and plants the synthesis of the essential amino acids lysine and threonine is predominantly regulated by feed-back inhibition of aspartate kinase (AK) and dihydrodipicolinate synthase (DHPS). In Escherichia coli, thrA, metLM, and lysC encode aspartokinase isozymes that show feedback inhibition by threonine, methionine, and lysine, respectively []. The lysine-sensitive isoenzyme of aspartate kinase from spinach leaves has a subunit composition of 4 large and 4 small subunits []. In plants although the control of carbon fixation and nitrogen assimilation has been studied in detail, relatively little is known about the regulation of carbon and nitrogen flow into amino acids. The metabolic regulation of expression of an Arabidopsis thaliana aspartate kinase/homoserine dehydrogenase (AK/HSD) gene, which encodes two linked key enzymes in the biosynthetic pathway of aspartate family amino acids has been studied []. The conversion of aspartate into either the storage amino acid asparagine or aspartate family amino acids may be subject to a coordinated, reciprocal metabolic control, and this biochemical branch point is a part of a larger, coordinated regulatory mechanism of nitrogen and carbon storage and utilization.; GO: 0008652 cellular amino acid biosynthetic process; PDB: 2X2W_B 2WXB_B 1B7B_C 2J4L_F 2J4K_E 2J4J_F 2OGX_B 3QUO_A 3D40_A 3D41_A ....
Probab=99.95 E-value=4e-27 Score=242.86 Aligned_cols=229 Identities=25% Similarity=0.332 Sum_probs=157.5
Q ss_pred CeEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhcccCCccc-cccccc----c
Q 005047 15 KRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLAD-LQKPQN----E 89 (716)
Q Consensus 15 ~~iVIKiGGs~l~~~~~~~~~~~~~~~a~~I~~l~~~G~~vvIVhGGg~~i~~~~~~~~~~~~~~~~~-~~~~~~----~ 89 (716)
|++|||||||++++++ .+ +.+++++|+.+.+.|.++|||||||++..... ..+ +..+.+.+ .+.++. .
T Consensus 1 k~~ViK~GGs~l~~~~----~~-~~~~~~~i~~l~~~g~~vvvV~g~g~~~~~~~-~~~-~~~~~~~~~~r~~~~~~~~~ 73 (242)
T PF00696_consen 1 KTIVIKLGGSSLTDKD----EE-LRELADDIALLSQLGIKVVVVHGGGSFTDELL-EKY-GIEPKFVDGSRVTDIETGLI 73 (242)
T ss_dssp SEEEEEE-HHGHSSHS----HH-HHHHHHHHHHHHHTTSEEEEEESSHHHHHHHH-HHC-THTTSEETHHCHBHHHHHHH
T ss_pred CeEEEEECchhhCCch----HH-HHHHHHHHHHHHhCCCeEEEEECChhhcCchH-Hhc-cCCcccchhhhhhhhhhhHH
Confidence 6899999999999853 23 89999999999999999999999988666544 332 22222221 111100 0
Q ss_pred hhHHHHHHhchHHHHHHHHHHhccCCCccceEEecCccCCchhh--HhHHHHHHHHHHhCCCeEEeeCCCceecCCCCCC
Q 005047 90 LDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDF--RKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYE 167 (716)
Q Consensus 90 l~~~~~~a~g~~~~~~~~~~~l~~~gi~~~~~~~~~~~~~~~~~--~~~~~~~i~~ll~~g~iPV~~g~d~v~~~~~~~~ 167 (716)
.....+..+++..+...+...+...+....+....+.++..... ...+.+.++.+|++|.|||++| +....
T Consensus 74 ~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~ipVv~g-~~~~~------ 146 (242)
T PF00696_consen 74 ITMAAAAELNRDALLDEIVSAGERLGAHAVGLSLSDGGISAAKRDAREVDKEAIRELLEQGIIPVVSG-FAGID------ 146 (242)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCTHHEEEHHHTGGTEEEEEEESSEEHHHHHHHHHHTTSEEEEES-EEEEE------
T ss_pred HHHHHhhccccchhHHHHHHhhhhhhHHHHhhhhhcccchhhhhhhhhhHHHHHHHHHHCCCEEEEeC-CcccC------
Confidence 01122233333222223334455555443322222211111111 1245789999999999999998 22122
Q ss_pred CCCce---e-ecchHHHHHHHhhcCCCEEEEeecCCccccCCCc-ccccccccccchhchHHHHhcCCCCCcccCCcHHH
Q 005047 168 DSSGI---F-WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAK 242 (716)
Q Consensus 168 ~~g~~---~-~~sD~~A~~lA~~L~Ad~Li~~TDVdGVy~~dP~-~p~a~~i~~is~~e~~~~~~~g~~~~~~~ggM~~K 242 (716)
..|.. + +++|++|+.||.+|+|++|+|+|||||||++||+ +|++++|++|+++|+.++... +.+++|||.+|
T Consensus 147 ~~g~~~~~~~~~sD~~A~~lA~~l~A~~li~~tdV~Gv~~~dP~~~~~~~~i~~l~~~e~~~l~~~---~~~~~~gm~~k 223 (242)
T PF00696_consen 147 DDGEVTTLGNVSSDYIAALLAAALGADKLIFLTDVDGVYTADPRIVPDARLIPELSYDEAEELASK---SGDVTGGMKPK 223 (242)
T ss_dssp TTSTEEEEEEETHHHHHHHHHHHTTCSEEEEEESSSSEBSSSTTTSTTSEBESEEEHHHHHHHHHH---TTSSTTTHHHH
T ss_pred CCCCcccCCCCCHHHHHHHHHHHhCchhhhhhhhcCceeecCCCCCCCCeeeeEeeHHHHHHHHhc---CCCCCCCHHHH
Confidence 24554 4 9999999999999999999999999999999995 799999999999999987642 35899999999
Q ss_pred HHHHHHHHHc-CCcEEEee
Q 005047 243 VNAAYCAACA-GIPVVITS 260 (716)
Q Consensus 243 l~aa~~a~~~-gi~v~I~~ 260 (716)
+.+|..++++ +++|+|+|
T Consensus 224 ~~~a~~~~~~~~~~v~I~n 242 (242)
T PF00696_consen 224 HPAALEAAEEGGIPVHIIN 242 (242)
T ss_dssp HHHHHHHHHHTTSEEEEEE
T ss_pred HHHHHHHHHcCCCcEEEeC
Confidence 9999999887 56799986
No 180
>PLN02825 amino-acid N-acetyltransferase
Probab=99.94 E-value=2.2e-26 Score=255.72 Aligned_cols=248 Identities=18% Similarity=0.228 Sum_probs=182.3
Q ss_pred ccCeEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhcccCCccc-ccccccchh
Q 005047 13 DVKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLAD-LQKPQNELD 91 (716)
Q Consensus 13 ~~~~iVIKiGGs~l~~~~~~~~~~~~~~~a~~I~~l~~~G~~vvIVhGGg~~i~~~~~~~~~~~~~~~~~-~~~~~~~l~ 91 (716)
..|++||||||+++.++. +.+++.+|+.|+..|.++||||||+++|+..+. ..++++.|.+ ++.+..+.-
T Consensus 16 rgktfVIk~gG~~l~~~~-------~~~l~~DialL~~lGi~~VlVHGggpqI~~~l~--~~gi~~~f~~G~RVTd~~~L 86 (515)
T PLN02825 16 RGSTFVVVISGEVVAGPH-------LDNILQDISLLHGLGIKFVLVPGTHVQIDKLLA--ERGREPKYVGAYRITDSAAL 86 (515)
T ss_pred CCCEEEEEECchhhcCch-------HHHHHHHHHHHHHCCCCEEEEcCCCHHHHHHHH--HcCCCceeeCCcccCCHHHH
Confidence 478999999999998654 789999999999999999999999999999764 3566666665 444432211
Q ss_pred HHHHHHhchHHHHH--HHH-----HHhccCCCcc----ceEEecCc--------------cCCchhh-HhHHHHHHHHHH
Q 005047 92 GKACAAVGQSSLMA--LYD-----TLFSQLDVTS----SQLLVTDS--------------DFRDEDF-RKQLYDTVQSLL 145 (716)
Q Consensus 92 ~~~~~a~g~~~~~~--~~~-----~~l~~~gi~~----~~~~~~~~--------------~~~~~~~-~~~~~~~i~~ll 145 (716)
...+.+.|...... .++ ..|..+|.++ ..+...++ |++..+. .+++.+.|+.+|
T Consensus 87 ~~~~~~~G~v~~~i~a~Ls~~~~v~~l~~~G~~a~~~~~gl~~~~Gn~v~a~~~gv~dgvD~g~vG~V~~Vd~~~i~~~L 166 (515)
T PLN02825 87 QASMEAAGKIRVMIEAKLSPGPSIPNLRRHGDNSRWHEVGVSVASGNFLAAKRRGVVNGVDFGATGEVKKIDVSRIKERL 166 (515)
T ss_pred HHHHHHHHHHHHHHHHhhccccchhHHHhcCCCCccccCceEeccCcEEEEEECCCCcCccccceeeEEEEcHHHHHHHH
Confidence 11344555555431 111 1234455443 22222221 3333332 236789999999
Q ss_pred hCCCeEEeeCCCceecCCCCCCCCCcee-ecchHHHHHHHhhcCCCEEEEeecCCccccCCCcccccccccccchhchHH
Q 005047 146 DLRVIPIFNENDAVSTRKAPYEDSSGIF-WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQA 224 (716)
Q Consensus 146 ~~g~iPV~~g~d~v~~~~~~~~~~g~~~-~~sD~~A~~lA~~L~Ad~Li~~TDVdGVy~~dP~~p~a~~i~~is~~e~~~ 224 (716)
+.|.|||++. ++++.+|..| +|+|.+|+.+|.+|+||||||+||++ +++++ +++|++|+.+|+++
T Consensus 167 ~~g~Ipvisp--------lg~s~~Ge~~NinaD~vA~avA~aL~A~KLI~ltd~~-~~~~~-----g~li~~l~~~e~~~ 232 (515)
T PLN02825 167 DSNCIVLLSN--------LGYSSSGEVLNCNTYEVATACALAIGADKLICIVDGP-ILDEN-----GRLIRFMTLEEADM 232 (515)
T ss_pred hCCCeEEECC--------ceECCCCCEEeeCHHHHHHHHHHHcCCCeEEEEeCcc-eecCC-----CCCcCcCCHHHHHH
Confidence 9999999974 4566688888 99999999999999999999999977 55443 78999999999998
Q ss_pred HHhcCCCC---------------------C--------------------------------c-----------------
Q 005047 225 EITFGDKS---------------------R--------------------------------V----------------- 234 (716)
Q Consensus 225 ~~~~g~~~---------------------~--------------------------------~----------------- 234 (716)
++..++.. . .
T Consensus 233 li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (515)
T PLN02825 233 LIRKRAKQSEIAANYVKAVGGEDYSYSLGLDSVNTTPFNNNGRGFWGSGSATDSFQNGVGFDNGNGLSGEQGFAIGGEER 312 (515)
T ss_pred HHHhhhhcchhhhhhhhhccccccccccccccccccccccccccccccccccccccccccccCcccccccccccccchhh
Confidence 77531000 0 0
Q ss_pred --ccCCcHHHHHHHHHHHHcCCc-EEEeeCCCcchH-HHHhcCCcceeEEecC
Q 005047 235 --GRGGMTAKVNAAYCAACAGIP-VVITSGFAMDSI-IKVLEGKRVGTLFHRD 283 (716)
Q Consensus 235 --~~ggM~~Kl~aa~~a~~~gi~-v~I~~g~~~~~l-~~~~tg~~iGT~i~~~ 283 (716)
.+.+...|+.+|..||+.||+ ||++|++.+++| .++||.+.+||++..+
T Consensus 313 ~~~~~~~~~~l~~a~~a~~~gv~r~hl~~~~~~gall~elft~dg~gt~i~~~ 365 (515)
T PLN02825 313 LSRLNGYLSELAAAAFVCRGGVQRVHLLDGTIEGVLLLELFTRDGMGTMIASD 365 (515)
T ss_pred chhhhhHHHHHHHHHHHHHcCCCeEEeccCCCCchHHHHhhccCCceeEeccC
Confidence 112234569999999999998 999999999999 8999999999999877
No 181
>PRK14557 pyrH uridylate kinase; Provisional
Probab=99.94 E-value=1.1e-25 Score=230.22 Aligned_cols=233 Identities=16% Similarity=0.212 Sum_probs=168.0
Q ss_pred cccCeEEEEeCCcccccCCC-cccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHh-hHHHhhhhhcccCCcccccccccc
Q 005047 12 KDVKRLVVKVGTAVVTRSDG-RLALGRLGALLEQLKELNSQGFEIILVSSGAVGV-GRQRLRYRKLVNSSLADLQKPQNE 89 (716)
Q Consensus 12 ~~~~~iVIKiGGs~l~~~~~-~~~~~~~~~~a~~I~~l~~~G~~vvIVhGGg~~i-~~~~~~~~~~~~~~~~~~~~~~~~ 89 (716)
.+++++||||||++|.++++ .++.+.+.+++++|+.+.+.|++++||||||..+ ++. .+. .+. ...
T Consensus 2 ~~~~riViKlGG~al~~~~~~~~~~~~i~~~a~~i~~~~~~g~~vvVVvGgGn~~rg~~-a~~-~~~-------~~~--- 69 (247)
T PRK14557 2 RPYKRVLIKLSGGALADQTGNSFNSKRLEHIANEILSIVDLGIEVSIVIGGGNIFRGHL-AEE-WGI-------DRV--- 69 (247)
T ss_pred CcccEEEEEeCceeECCCCCCCcCHHHHHHHHHHHHHHHHcCCeEEEEECCcHHHHHHH-HHh-cCC-------ChH---
Confidence 56899999999999987654 5778889999999999999999999999997544 442 221 111 100
Q ss_pred hhHHHHHHhchHHHHHHHHHHhccC-CCccceEEecCccCCchhhHhHHHHHHHHHHhCCCeEEeeCCCceecCCCCCCC
Q 005047 90 LDGKACAAVGQSSLMALYDTLFSQL-DVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYED 168 (716)
Q Consensus 90 l~~~~~~a~g~~~~~~~~~~~l~~~-gi~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~g~iPV~~g~d~v~~~~~~~~~ 168 (716)
..+.+-++|......++...|... ++.+. ++++..+.... .......+.+.|++|.|||+.| .
T Consensus 70 -~~D~ig~~g~~lna~ll~~~l~~~~~~~~~--i~t~~~~~~~~-~~~~~~~~~~~l~~g~VvV~~G-----~------- 133 (247)
T PRK14557 70 -EADNIGTLGTIINSLMLRGVLTSKTNKEVR--VMTSIPFNAVA-EPYIRLRAVHHLDNGYIVIFGG-----G------- 133 (247)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHhhhCCcee--EEecccccccc-chhhHHHHHHHHhCCCEEEEEC-----C-------
Confidence 012344445544444555566543 33221 34443333211 1112234666699999999976 1
Q ss_pred CCceeecchHHHHHHHhhcCCCEEEEe-ecCCccccCCC-cccccccccccchhchHHHHhcCCCCCcccCCcHHHHHHH
Q 005047 169 SSGIFWDNDSLAGLLALELKADLLVLL-SDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAA 246 (716)
Q Consensus 169 ~g~~~~~sD~~A~~lA~~L~Ad~Li~~-TDVdGVy~~dP-~~p~a~~i~~is~~e~~~~~~~g~~~~~~~ggM~~Kl~aa 246 (716)
.|..++++|++|+++|.+++||.|+++ |||||||++|| ++|+|++|++|++.|+.. .+ -.-| ..+++
T Consensus 134 ~g~~~~stD~lAallA~~l~Ad~li~~ttdVdGvY~~DP~~~~~Ak~i~~i~~~e~~~---~~------~~~~--~~~A~ 202 (247)
T PRK14557 134 NGQPFVTTDYPSVQRAIEMNSDAILVAKQGVDGVFTSDPKHNKSAKMYRKLNYNDVVR---QN------IQVM--DQAAL 202 (247)
T ss_pred cCCCccChHHHHHHHHHHhCCCEEEEecCCcCEeECCCCCCCCCCEEeeEEChhhhcc---cC------HHHH--HHHHH
Confidence 233458899999999999999999999 59999999999 599999999999887631 11 0113 34678
Q ss_pred HHHHHcCCcEEEeeCCCcchHHHHhcCCcceeEEecC
Q 005047 247 YCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRD 283 (716)
Q Consensus 247 ~~a~~~gi~v~I~~g~~~~~l~~~~tg~~iGT~i~~~ 283 (716)
..|.++|++++|+||+.|+.|.+++.|+..||++.+.
T Consensus 203 ~~a~~~gi~v~I~ng~~~~~l~~~l~g~~~GT~i~~~ 239 (247)
T PRK14557 203 LLARDYNLPAHVFNFDEPGVMRRICLGEHVGTLINDD 239 (247)
T ss_pred HHHHHCCCcEEEEeCCCChHHHHHHcCCCCcEEEecC
Confidence 8899999999999999999999999999999999876
No 182
>PRK12354 carbamate kinase; Reviewed
Probab=99.94 E-value=1.6e-25 Score=232.08 Aligned_cols=249 Identities=23% Similarity=0.268 Sum_probs=166.9
Q ss_pred CeEEEEeCCcccccCCCc--cc--HHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhcccCCcccccccccch
Q 005047 15 KRLVVKVGTAVVTRSDGR--LA--LGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNEL 90 (716)
Q Consensus 15 ~~iVIKiGGs~l~~~~~~--~~--~~~~~~~a~~I~~l~~~G~~vvIVhGGg~~i~~~~~~~~~~~~~~~~~~~~~~~~l 90 (716)
.++||||||++|.+++.+ .+ +++++..++.|+.+.+ |+++||+||+|+|+|....+....... ..+.|
T Consensus 1 ~~iVialGGnal~~~~~~~~~~~~~~~v~~~a~~ia~~~~-~~~vvi~HGnGpqvG~~~~~~~~~~~~-------~~~pl 72 (307)
T PRK12354 1 MRIVVALGGNALLRRGEPLTAENQRANIRIAAEQIAKIAR-EHELVIVHGNGPQVGLLALQNAAYKDV-------TPYPL 72 (307)
T ss_pred CeEEEEeccHHhCCCCCCcCHHHHHHHHHHHHHHHHHHhC-CCeEEEEeCCccHHhHHHHHHHHhcCC-------CCCCc
Confidence 369999999999987643 33 4588999999999998 999999999999999554332211110 11222
Q ss_pred hHHHHHHhchHHHH--HHHHHHhccCCCc--cceEEecCcc--CCc-----------------------------hhh--
Q 005047 91 DGKACAAVGQSSLM--ALYDTLFSQLDVT--SSQLLVTDSD--FRD-----------------------------EDF-- 133 (716)
Q Consensus 91 ~~~~~~a~g~~~~~--~~~~~~l~~~gi~--~~~~~~~~~~--~~~-----------------------------~~~-- 133 (716)
.-....+.|..+.+ ..+.+.|....+. ..|+.+..+| |.+ .++
T Consensus 73 ~~~~a~sqg~iGy~l~q~l~~~l~~~~v~tivtq~~Vd~~dpAf~~ptKpiG~~y~~~~a~~~~~e~g~~~~~dg~g~rr 152 (307)
T PRK12354 73 DVLGAETEGMIGYMLEQELGNLLPERPVATLLTQVEVDANDPAFANPTKPIGPVYDEAEAERLAAEKGWTIKPDGDYFRR 152 (307)
T ss_pred chhcccccchHHHHHHHHHHHHhcCCcceEEEEEEEEcCCCCccCCCCCCcCcccCHHHHHHHHHhcCCEEeecCCceEE
Confidence 22223344444432 2233444332211 1122222111 110 001
Q ss_pred -------H-hHHHHHHHHHHhCCCeEEeeCCCceecCCCC-CCCCCc-eeecchHHHHHHHhhcCCCEEEEeecCCcccc
Q 005047 134 -------R-KQLYDTVQSLLDLRVIPIFNENDAVSTRKAP-YEDSSG-IFWDNDSLAGLLALELKADLLVLLSDVEGLYS 203 (716)
Q Consensus 134 -------~-~~~~~~i~~ll~~g~iPV~~g~d~v~~~~~~-~~~~g~-~~~~sD~~A~~lA~~L~Ad~Li~~TDVdGVy~ 203 (716)
. ..+.+.|+.||++|+|||..|+..+....-+ +...+. .++|+|++|++||.+|+||+|+|+|||||||+
T Consensus 153 Vv~SP~P~~ive~~~I~~Ll~~g~ivIa~GGGGIPV~~~~~~~~~gv~aViD~D~~Aa~LA~~l~Ad~LiiLTdVdGVy~ 232 (307)
T PRK12354 153 VVPSPRPKRIVEIRPIRWLLEKGHLVICAGGGGIPVVYDADGKLHGVEAVIDKDLAAALLAEQLDADLLLILTDVDAVYL 232 (307)
T ss_pred EecCCCCcceeCHHHHHHHHHCCCEEEEeCCCccCeEecCCCceeeeeecCCccHHHHHHHHHcCCCEEEEEeCCcceec
Confidence 1 1357899999999998777654444321000 000111 14899999999999999999999999999999
Q ss_pred CCCcccccccccccchhchHHHHhcCCCCCcccCCcHHHHHHHHHHHHcCC-cEEEeeCCCcchHHHHhcCCcceeEEec
Q 005047 204 GPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGI-PVVITSGFAMDSIIKVLEGKRVGTLFHR 282 (716)
Q Consensus 204 ~dP~~p~a~~i~~is~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a~~~gi-~v~I~~g~~~~~l~~~~tg~~iGT~i~~ 282 (716)
+++ +|++++|++++.+|++++ .+++|||.||+++|+.+++.+. +++|.+ ++.+.+++.|+ .||++..
T Consensus 233 ~~~-~p~~k~i~~it~~e~~~~-------~f~~GgM~pKV~AA~~~~~~gg~~viI~~---~~~l~~al~G~-~GT~I~~ 300 (307)
T PRK12354 233 DWG-KPTQRAIAQATPDELREL-------GFAAGSMGPKVEAACEFVRATGKIAGIGS---LEDIQAILAGE-AGTRISP 300 (307)
T ss_pred CCC-CCCCeECCCCCHHHHHhh-------CCCcCChHHHHHHHHHHHHhCCCEEEECC---HHHHHHHHCCC-CceEEec
Confidence 854 688999999999998865 2679999999999999887765 488864 66788888887 7999976
Q ss_pred C
Q 005047 283 D 283 (716)
Q Consensus 283 ~ 283 (716)
+
T Consensus 301 ~ 301 (307)
T PRK12354 301 E 301 (307)
T ss_pred C
Confidence 5
No 183
>PRK08841 aspartate kinase; Validated
Probab=99.94 E-value=2e-25 Score=243.45 Aligned_cols=230 Identities=22% Similarity=0.293 Sum_probs=176.0
Q ss_pred cCeEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhcccCCcccccccccchhHH
Q 005047 14 VKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGK 93 (716)
Q Consensus 14 ~~~iVIKiGGs~l~~~~~~~~~~~~~~~a~~I~~l~~~G~~vvIVhGGg~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 93 (716)
|+++|+||||+++.+.+ .+.+++++|+.+.+.|.++||||||++..+..++....... .+ ...-..+
T Consensus 1 m~~~V~KfGGtsv~~~~------~i~~va~~I~~~~~~g~~vvvVvSa~~~~td~ll~~~~~~~----~~---~~~~~~d 67 (392)
T PRK08841 1 MPLIVQKFGGTSVGSIE------RIQTVAEHIIKAKNDGNQVVVVVSAMAGETNRLLGLAKQVD----SV---PTARELD 67 (392)
T ss_pred CCeEEEeECcccCCCHH------HHHHHHHHHHHHHHCCCCEEEEECCCchHHHHHHHhhhhhc----cC---CCHHHHH
Confidence 35899999999998743 68999999999999999999999998877776654322111 11 0011235
Q ss_pred HHHHhchHHHHHHHHHHhccCCCccceE------EecCccCCchhhHhHHHHHHHHHHhCCCeEEeeCCCceecCCCCCC
Q 005047 94 ACAAVGQSSLMALYDTLFSQLDVTSSQL------LVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYE 167 (716)
Q Consensus 94 ~~~a~g~~~~~~~~~~~l~~~gi~~~~~------~~~~~~~~~~~~~~~~~~~i~~ll~~g~iPV~~g~d~v~~~~~~~~ 167 (716)
.+.++|+..++.++...|...|+++..+ +++++.+........+.+.+..+++.|.|||+.|.- +..
T Consensus 68 ~l~s~GE~~s~~lla~~L~~~Gi~a~~l~~~~~~i~t~~~~~~~~i~~~~~~~i~~ll~~~~vpVv~Gf~-------g~~ 140 (392)
T PRK08841 68 VLLSAGEQVSMALLAMTLNKLGYAARSLTGAQANIVTDNQHNDATIKHIDTSTITELLEQDQIVIVAGFQ-------GRN 140 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCeEEEehhHcCEEecCCCCCceechhhHHHHHHHHhCCCEEEEeCCc-------ccC
Confidence 7889999999988999999999875432 344444432222223468899999999999998721 111
Q ss_pred CCCcee----ecchHHHHHHHhhcCCCEEEEeecCCccccCCC-cccccccccccchhchHHHHhcCCCCCcccCCcHHH
Q 005047 168 DSSGIF----WDNDSLAGLLALELKADLLVLLSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAK 242 (716)
Q Consensus 168 ~~g~~~----~~sD~~A~~lA~~L~Ad~Li~~TDVdGVy~~dP-~~p~a~~i~~is~~e~~~~~~~g~~~~~~~ggM~~K 242 (716)
..|... +++|+.|+++|.+|+||+|+++|||||||++|| .+|++++|++|+++|+.++... |.+.-+
T Consensus 141 ~~g~~ttlgrggsD~tAa~lA~~L~Ad~l~i~TDVdGVyt~DP~~v~~A~~i~~is~~ea~ela~~--------Ga~vlh 212 (392)
T PRK08841 141 ENGDITTLGRGGSDTTAVALAGALNADECQIFTDVDGVYTCDPRVVKNARKLDVIDFPSMEAMARK--------GAKVLH 212 (392)
T ss_pred CCCCEEEeCCCChHHHHHHHHHHcCCCEEEEEeCCCCCCcCCCCCCCCceEcccccHHHHHHHHhc--------CccccC
Confidence 133322 589999999999999999999999999999999 5999999999999999987654 455778
Q ss_pred HHHHHHHHHcCCcEEEeeCCCcchHHHHhcCCcceeEEe
Q 005047 243 VNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFH 281 (716)
Q Consensus 243 l~aa~~a~~~gi~v~I~~g~~~~~l~~~~tg~~iGT~i~ 281 (716)
.+++..+.++|||++|.|++.++ .||++.
T Consensus 213 p~ai~~a~~~~Ipi~i~n~~~~~----------~GT~I~ 241 (392)
T PRK08841 213 LPSVQHAWKHSVPLRVLSSFEVG----------EGTLIK 241 (392)
T ss_pred HHHHHHHHHCCCeEEEEecCCCC----------CCeEEE
Confidence 89999999999999999987642 378774
No 184
>COG0528 PyrH Uridylate kinase [Nucleotide transport and metabolism]
Probab=99.94 E-value=2.4e-25 Score=218.07 Aligned_cols=231 Identities=19% Similarity=0.229 Sum_probs=169.6
Q ss_pred cccCeEEEEeCCcccccCCC-cccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhcccCCcccccccccch
Q 005047 12 KDVKRLVVKVGTAVVTRSDG-RLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNEL 90 (716)
Q Consensus 12 ~~~~~iVIKiGGs~l~~~~~-~~~~~~~~~~a~~I~~l~~~G~~vvIVhGGg~~i~~~~~~~~~~~~~~~~~~~~~~~~l 90 (716)
.+++++|+||||++|..+++ .+|.+.+.+++++|+++.+.|+++.||.|||.-+.. ....+.+.. ... .
T Consensus 3 ~~~~rillkLsGe~l~g~~~~gid~~~i~~~a~~i~~~~~~g~eV~iVvGGGni~Rg-~~~~~~g~~-------r~~--~ 72 (238)
T COG0528 3 PKYMRILLKLSGEALAGEQGFGIDPEVLDRIANEIKELVDLGVEVAVVVGGGNIARG-YIGAAAGMD-------RVT--A 72 (238)
T ss_pred cceEEEEEEeecceecCCCCCCCCHHHHHHHHHHHHHHHhcCcEEEEEECCCHHHHh-HHHHHcCCc-------hhh--h
Confidence 45789999999999997664 578899999999999999999999999999774433 332222221 110 0
Q ss_pred hHHHHHHhchHHHHHHHHHHhccCCCccceEEecCccCC-chhhHhHHHHHHHHHHhCCCeEEeeCCCceecCCCCCCCC
Q 005047 91 DGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFR-DEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDS 169 (716)
Q Consensus 91 ~~~~~~a~g~~~~~~~~~~~l~~~gi~~~~~~~~~~~~~-~~~~~~~~~~~i~~ll~~g~iPV~~g~d~v~~~~~~~~~~ 169 (716)
+..++.+--.+. .++..+|...+++.. + .+..... -.+++ +.+...+.|++|.|+|+.| . +
T Consensus 73 D~mGmlaTvmNa--l~L~~aL~~~~~~~~-v-~sai~~~~~~e~~--~~~~A~~~l~~grVvIf~g-----G-------t 134 (238)
T COG0528 73 DYMGMLATVMNA--LALQDALERLGVDTR-V-QSAIAMPQVAEPY--SRREAIRHLEKGRVVIFGG-----G-------T 134 (238)
T ss_pred hHHHHHHHHHHH--HHHHHHHHhcCCcce-e-cccccCccccCcc--CHHHHHHHHHcCCEEEEeC-----C-------C
Confidence 111121111111 134577877777653 1 1111110 01122 2345666799999999976 1 5
Q ss_pred CceeecchHHHHHHHhhcCCCEEEEeec-CCccccCCC-cccccccccccchhchHHHHhcCCCCCcccCCcHHHHHHHH
Q 005047 170 SGIFWDNDSLAGLLALELKADLLVLLSD-VEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAY 247 (716)
Q Consensus 170 g~~~~~sD~~A~~lA~~L~Ad~Li~~TD-VdGVy~~dP-~~p~a~~i~~is~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~ 247 (716)
+.+|+++|++|+++|++++||.|+.+|+ |||||++|| ++|+|+++++||++|+.+.... .....|..
T Consensus 135 g~P~fTTDt~AALrA~ei~ad~ll~atn~VDGVY~~DPkk~pdA~~~~~Lty~e~l~~~l~-----------vmD~tA~~ 203 (238)
T COG0528 135 GNPGFTTDTAAALRAEEIEADVLLKATNKVDGVYDADPKKDPDAKKYDTLTYDEVLKIGLK-----------VMDPTAFS 203 (238)
T ss_pred CCCCCchHHHHHHHHHHhCCcEEEEeccCCCceeCCCCCCCCCceecccCCHHHHHHhcCe-----------eecHHHHH
Confidence 6678999999999999999999999995 999999999 6999999999999999864321 22467888
Q ss_pred HHHHcCCcEEEeeCCCcchHHHHhcCCcceeEEe
Q 005047 248 CAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFH 281 (716)
Q Consensus 248 ~a~~~gi~v~I~~g~~~~~l~~~~tg~~iGT~i~ 281 (716)
.+.+++++++|+|.+.++++..++.|+..||.+.
T Consensus 204 l~~~~~i~i~Vfn~~~~~~l~~~~~ge~~gT~V~ 237 (238)
T COG0528 204 LARDNGIPIIVFNINKPGNLKRALKGEEVGTIVE 237 (238)
T ss_pred HHHHcCCcEEEEeCCCCccHHHHHcCCCCceEec
Confidence 8999999999999999999999999999999874
No 185
>PRK04531 acetylglutamate kinase; Provisional
Probab=99.93 E-value=4.1e-25 Score=239.97 Aligned_cols=211 Identities=23% Similarity=0.218 Sum_probs=159.5
Q ss_pred cCeEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhcccCCccc-ccccccchhH
Q 005047 14 VKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLAD-LQKPQNELDG 92 (716)
Q Consensus 14 ~~~iVIKiGGs~l~~~~~~~~~~~~~~~a~~I~~l~~~G~~vvIVhGGg~~i~~~~~~~~~~~~~~~~~-~~~~~~~l~~ 92 (716)
++++|||+||+++.+ . +..++++|+.|++.|.++|||||||++++..+.. .++++.+.+ ++.+. .
T Consensus 36 ~~~~VIKiGG~~l~~-~-------~~~l~~dla~L~~~G~~~VlVHGggpqI~~~l~~--~gie~~~v~G~RVTd----~ 101 (398)
T PRK04531 36 ERFAVIKVGGAVLRD-D-------LEALASSLSFLQEVGLTPIVVHGAGPQLDAELDA--AGIEKETVNGLRVTS----P 101 (398)
T ss_pred CcEEEEEEChHHhhc-C-------HHHHHHHHHHHHHCCCcEEEEECCCHHHHHHHHH--cCCCcEEECCEecCC----H
Confidence 478999999999974 2 5899999999999999999999999999987643 455555544 33332 1
Q ss_pred HHHHHhchHHHHHHHHHHhccCCCccceEEecCccCCchhhHhHHHHHHHHHHhCCCeEEeeCCCceecCCCCCCCCCce
Q 005047 93 KACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGI 172 (716)
Q Consensus 93 ~~~~a~g~~~~~~~~~~~l~~~gi~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~g~iPV~~g~d~v~~~~~~~~~~g~~ 172 (716)
..+..+- ..+... + ....+.|+.+|+.|.|||+++ ++.+..|..
T Consensus 102 ~tl~vv~---------~~l~~v------------n-------~~lv~~I~~~L~~g~IPVlsp--------lg~~~~G~~ 145 (398)
T PRK04531 102 EALAIVR---------KVFQRS------------N-------LDLVEAVESSLRAGSIPVIAS--------LGETPSGQI 145 (398)
T ss_pred HHHHHHH---------HHHHHH------------H-------HHHHHHHHHHHHCCCEEEEeC--------cEECCCCcE
Confidence 1111110 111000 0 001123889999999999975 122335666
Q ss_pred e-ecchHHHHHHHhhcCCCEEEEeecCCccccCCCcccccccccccch-hchHHHHhcCCCCCcccCCcHHHHHHHHHHH
Q 005047 173 F-WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIR-AKHQAEITFGDKSRVGRGGMTAKVNAAYCAA 250 (716)
Q Consensus 173 ~-~~sD~~A~~lA~~L~Ad~Li~~TDVdGVy~~dP~~p~a~~i~~is~-~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a~ 250 (716)
+ +|+|.+|+.||.+|+|++|+|+|||+|||+.+ +++|++|+. ++...++.. .+++|||++||++|..++
T Consensus 146 ~NvnaD~vA~~LA~aL~a~KLIfltdv~GV~d~~-----g~~i~~i~~~~e~~~l~~~----~~vtgGM~~KL~~a~~al 216 (398)
T PRK04531 146 LNINADVAANELVSALQPYKIIFLTGTGGLLDAD-----GKLISSINLSTEYDHLMQQ----PWINGGMKLKLEQIKELL 216 (398)
T ss_pred EEECHHHHHHHHHHHcCCCEEEEEECCCCccCCC-----CCCcccCCHHHHHHHHHhc----CCCCccHHHHHHHHHHHH
Confidence 6 99999999999999999999999999999754 789999997 566665543 379999999999999999
Q ss_pred HcCCcEEEeeCCCcchH-HHHhcCCcceeEEecC
Q 005047 251 CAGIPVVITSGFAMDSI-IKVLEGKRVGTLFHRD 283 (716)
Q Consensus 251 ~~gi~v~I~~g~~~~~l-~~~~tg~~iGT~i~~~ 283 (716)
++...++++++..|+++ .+.++.+..||.+...
T Consensus 217 ~~~~~~~~V~i~~~~~Ll~eLft~~G~GT~I~~g 250 (398)
T PRK04531 217 DRLPLESSVSITSPSDLAKELFTHKGSGTLVRRG 250 (398)
T ss_pred hCCCcEEEEEecCCCHHHHHHccCCCCCeEEecC
Confidence 75334888888889998 6688888899999887
No 186
>TIGR02076 pyrH_arch uridylate kinase, putative. This family consists of the archaeal and spirochete proteins most closely related to bacterial uridylate kinases (TIGR02075), an enzyme involved in pyrimidine biosynthesis. Members are likely, but not known, to be functionally equivalent to their bacterial counterparts. However, substantial sequence differences suggest that regulatory mechanisms may be different; the bacterial form is allosterically regulated by GTP.
Probab=99.93 E-value=5e-25 Score=223.76 Aligned_cols=218 Identities=20% Similarity=0.267 Sum_probs=156.6
Q ss_pred EEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhcccCCcccccccccchhHHHHH
Q 005047 17 LVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACA 96 (716)
Q Consensus 17 iVIKiGGs~l~~~~~~~~~~~~~~~a~~I~~l~~~G~~vvIVhGGg~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 96 (716)
+|||||||+|++++ +.+.+.+++++|+.+.+. ++++||||||.. .+.+.+...... +. ...+....+.
T Consensus 1 iViKlGGs~l~~~~---~~~~i~~i~~~i~~~~~~-~~viiV~ggG~~-a~~~~~~~~~~~-----~~--~~~~~~~g~~ 68 (221)
T TIGR02076 1 IVISLGGSVLSPEI---DAEFIKEFANILRKLSDE-HKVGVVVGGGKT-ARRYIGVARELG-----AS--ETFLDEIGID 68 (221)
T ss_pred CEEEechhhcCCCC---CHHHHHHHHHHHHHHHhC-CeEEEEECCcHH-HHHHHHHHHHcC-----CC--HHHHHHhhhH
Confidence 58999999999764 677899999999999876 799999988764 343322222110 00 0001111111
Q ss_pred HhchHHHHHHHHHHhccCCCccceEEecCccCCchhhHhHHHHHHHHHHhCCCeEEeeCCCceecCCCCCCCCCceeecc
Q 005047 97 AVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDN 176 (716)
Q Consensus 97 a~g~~~~~~~~~~~l~~~gi~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~g~iPV~~g~d~v~~~~~~~~~~g~~~~~s 176 (716)
+......++..+|...+++.... + .....++++.|.+||++| +. + .+++
T Consensus 69 --~~~ln~~~l~~ll~~~~~~~~~~-----~----------~~~~~~~l~~g~ipv~~G-~~--~-----------~~s~ 117 (221)
T TIGR02076 69 --ATRLNAMLLIAALGDDAYPKVPE-----N----------FEEALEAMSLGKIVVMGG-TH--P-----------GHTT 117 (221)
T ss_pred --HHHHHHHHHHHHHHhcCCCCcCC-----C----------HHHHHHHHHcCCEEEEcC-CC--C-----------CCCc
Confidence 11111223445554444433211 1 123456788999999987 21 1 1788
Q ss_pred hHHHHHHHhhcCCCEEEEeecCCccccCCC-cccccccccccchhchHHHHhcCCCCCcccC-CcHHHHHHHHHHHHcCC
Q 005047 177 DSLAGLLALELKADLLVLLSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGDKSRVGRG-GMTAKVNAAYCAACAGI 254 (716)
Q Consensus 177 D~~A~~lA~~L~Ad~Li~~TDVdGVy~~dP-~~p~a~~i~~is~~e~~~~~~~g~~~~~~~g-gM~~Kl~aa~~a~~~gi 254 (716)
|++|+++|.+|+||+|+++|||||||++|| ++|++++|++++++|+.++... +...+| +|..|+.++..+.+.|+
T Consensus 118 D~~A~~lA~~l~A~~li~ltdVdGvy~~dP~~~~~a~~i~~i~~~e~~~~~~~---~~~~~g~~~~~~~~a~~~~~~~~i 194 (221)
T TIGR02076 118 DAVAALLAEFSKADLLINATNVDGVYDKDPKKDPDAKKFDKLTPEELVEIVGS---SSVKAGSNEVVDPLAAKIIERSKI 194 (221)
T ss_pred HHHHHHHHHHcCCCEEEEEeCCCcccCCCCCCCCCCeEeeEECHHHHHHHhcC---CCccCCCCceeHHHHHHHHHHCCC
Confidence 999999999999999999999999999999 5899999999999998875532 134566 67789999999999999
Q ss_pred cEEEeeCCCcchHHHHhcCCcceeEE
Q 005047 255 PVVITSGFAMDSIIKVLEGKRVGTLF 280 (716)
Q Consensus 255 ~v~I~~g~~~~~l~~~~tg~~iGT~i 280 (716)
+|+|+||+.|+++.+++.|+..||.+
T Consensus 195 ~v~I~~g~~~~~l~~~l~g~~~GT~i 220 (221)
T TIGR02076 195 RTIVVNGRDPENLEKVLKGEHVGTII 220 (221)
T ss_pred cEEEECCCCccHHHHHHCCCCCCeEe
Confidence 99999999999999899998889986
No 187
>cd04253 AAK_UMPK-PyrH-Pf AAK_UMPK-PyrH-Pf: UMP kinase (UMPK)-Pf, the mostly archaeal uridine monophosphate kinase (uridylate kinase) enzymes that catalyze UMP phosphorylation and play a key role in pyrimidine nucleotide biosynthesis; regulation of this process is via feed-back control and via gene repression of carbamoyl phosphate synthetase (the first enzyme of the pyrimidine biosynthesis pathway). The UMP kinase of Pyrococcus furiosus (Pf) is known to function as a homohexamer, with GTP and UTP being allosteric effectors. Like other related enzymes (carbamate kinase, aspartokinase, and N-acetylglutamate kinase) the E. coli and most bacterial UMPKs have a conserved, N-terminal, lysine residue proposed to function in the catalysis of the phosphoryl group transfer, whereas most archaeal UMPKs (this CD) appear to lack this residue and the Pyrococcus furiosus structure has an additional Mg ion bound to the ATP molecule which is proposed to function as the catalysis instead. Members of thi
Probab=99.93 E-value=8.1e-25 Score=222.03 Aligned_cols=217 Identities=21% Similarity=0.290 Sum_probs=156.0
Q ss_pred eEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhcccCCcccccccccchhHHHH
Q 005047 16 RLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKAC 95 (716)
Q Consensus 16 ~iVIKiGGs~l~~~~~~~~~~~~~~~a~~I~~l~~~G~~vvIVhGGg~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 95 (716)
++|||||||++++++ +.+.+.++++.|+.+.. |.+++||||||. +++.+...+.... +... .++..++
T Consensus 1 ~iViKlGGs~l~~~~---~~~~i~~~~~~i~~~~~-~~~iiiV~GgG~-~a~~~~~~~~~~~-----~~~~--~~d~~g~ 68 (221)
T cd04253 1 RIVISLGGSVLAPEK---DADFIKEYANVLRKISD-GHKVAVVVGGGR-LAREYISVARKLG-----ASEA--FLDEIGI 68 (221)
T ss_pred CEEEEeccceeCCCC---ChHHHHHHHHHHHHHhC-CCEEEEEECCCH-HHHHHHHHHHHcC-----CCHH--HHHHhcC
Confidence 579999999997653 66789999999998876 779999999866 5665433322111 0000 0000111
Q ss_pred HHhchHHHHH-HHHHHhccCCCccceEEecCccCCchhhHhHHHHHHHHHHhCCCeEEeeCCCceecCCCCCCCCCceee
Q 005047 96 AAVGQSSLMA-LYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFW 174 (716)
Q Consensus 96 ~a~g~~~~~~-~~~~~l~~~gi~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~g~iPV~~g~d~v~~~~~~~~~~g~~~~ 174 (716)
... .+.. ++..++. .+++...+ +.+.+.++|+.|.|||++| +. + .+
T Consensus 69 ~~~---~ln~~~~~~~l~-~~~~~~~~---------------~~~~~~~~l~~g~vpv~~G-~~--~-----------~~ 115 (221)
T cd04253 69 MAT---RLNARLLIAALG-DAYPPVPT---------------SYEEALEAMFTGKIVVMGG-TE--P-----------GQ 115 (221)
T ss_pred HHH---HHHHHHHHHHHh-cCCCcCCC---------------CHHHHHHHHHcCCeEEEEC-CC--C-----------CC
Confidence 111 1111 2223332 44432211 1345778899999999998 21 1 16
Q ss_pred cchHHHHHHHhhcCCCEEEEeecCCccccCCC-cccccccccccchhchHHHHhcCCCCCcccCC-cHHHHHHHHHHHHc
Q 005047 175 DNDSLAGLLALELKADLLVLLSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGDKSRVGRGG-MTAKVNAAYCAACA 252 (716)
Q Consensus 175 ~sD~~A~~lA~~L~Ad~Li~~TDVdGVy~~dP-~~p~a~~i~~is~~e~~~~~~~g~~~~~~~gg-M~~Kl~aa~~a~~~ 252 (716)
++|++|+++|.+|+|++|+++|||||||++|| .+|++++|++|+++|+.++.... + ...|+ |..|+.++..+.++
T Consensus 116 s~D~~a~~lA~~l~a~~li~~tdVdGVy~~dP~~~~~a~~i~~i~~~e~~~~~~~~-~--~~~g~~~~~d~~a~~~~~~~ 192 (221)
T cd04253 116 STDAVAALLAERLGADLLINATNVDGVYSKDPRKDPDAKKFDRLSADELIDIVGKS-S--WKAGSNEPFDPLAAKIIERS 192 (221)
T ss_pred ccHHHHHHHHHHcCCCEEEEEeCCCeeECCCCCCCCCCeEeeEeCHHHHHHHccCC-C--cCCCCCcchHHHHHHHHHHC
Confidence 78999999999999999999999999999999 58999999999999988754331 1 22343 67799999999999
Q ss_pred CCcEEEeeCCCcchHHHHhcCCcceeEE
Q 005047 253 GIPVVITSGFAMDSIIKVLEGKRVGTLF 280 (716)
Q Consensus 253 gi~v~I~~g~~~~~l~~~~tg~~iGT~i 280 (716)
|++++|+||+.|++|.++++|+..||.+
T Consensus 193 gi~~~I~~g~~p~~l~~~l~g~~~GT~I 220 (221)
T cd04253 193 GIKTIVVDGRDPENLERALKGEFVGTII 220 (221)
T ss_pred CCeEEEECCCCccHHHHHHCCCCCCeEe
Confidence 9999999999999999999999889986
No 188
>TIGR00656 asp_kin_monofn aspartate kinase, monofunctional class. The Lys-sensitive enzyme of Bacillus subtilis resembles the E. coli form but is an alpha 2/beta 2 heterotetramer, where the beta subunit is translated from an in-phase alternative initiator at Met-246. The protein slr0657 from Synechocystis PCC6803 is extended by a duplication of the C-terminal region corresponding to the beta chain. Incorporation of a second copy of the C-terminal domain may be quite common in this subgroup of aspartokinases.
Probab=99.93 E-value=4.9e-25 Score=243.84 Aligned_cols=230 Identities=21% Similarity=0.303 Sum_probs=176.4
Q ss_pred eEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhh-cccCCcccccccccchhHHH
Q 005047 16 RLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRK-LVNSSLADLQKPQNELDGKA 94 (716)
Q Consensus 16 ~iVIKiGGs~l~~~~~~~~~~~~~~~a~~I~~l~~~G~~vvIVhGGg~~i~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~ 94 (716)
++|+||||+++.+.+ .+++++++|+.+++.|++++|||||++.++..+.+... +...... ....+.
T Consensus 2 ~iViK~GGs~~~~~~------~i~~~~~~i~~~~~~g~~~vvV~sg~~~~t~~l~~~~~~~~~~~~~-------~~~~~~ 68 (401)
T TIGR00656 2 LIVQKFGGTSVGSGE------RIKNAARIVLKEKKEGHKVVVVVSAMSGVTDALVEISEKAIRDAIT-------PRERDE 68 (401)
T ss_pred cEEEEECCcCcCCHH------HHHHHHHHHHHHHHcCCCEEEEEeCCCCChHHHHHHHHHHhccCCC-------hHHHHH
Confidence 589999999998743 68999999999999999999999999999987654431 1110000 011246
Q ss_pred HHHhchHHHHHHHHHHhccCCCccceE------EecCccCCchhhHhHHH-HHHHHHHhCCCeEEeeCCCceecCCCCCC
Q 005047 95 CAAVGQSSLMALYDTLFSQLDVTSSQL------LVTDSDFRDEDFRKQLY-DTVQSLLDLRVIPIFNENDAVSTRKAPYE 167 (716)
Q Consensus 95 ~~a~g~~~~~~~~~~~l~~~gi~~~~~------~~~~~~~~~~~~~~~~~-~~i~~ll~~g~iPV~~g~d~v~~~~~~~~ 167 (716)
+.++|+..+..++...|..+|+++.++ +++..++.+......+. +.+.++++.|.|||++|.-+ . +
T Consensus 69 i~~~Ge~~s~~~~~~~l~~~g~~a~~l~~~~~~~~t~~~~~~~~~~~~~~~~~l~~~l~~~~vpVi~g~~~-~------~ 141 (401)
T TIGR00656 69 LVSHGERLSSALFSGALRDLGVKAIWLDGGEAGIITDDNFGNAKIDIIATEERLLPLLEEGIIVVVAGFQG-A------T 141 (401)
T ss_pred HhhHHHHHHHHHHHHHHHhCCCceEEeccccceEEeCCCCCceEeeecchHHHHHHHHhCCCEEEecCcce-e------C
Confidence 778899887788899999999987765 33444443322222334 78999999999999987211 1 1
Q ss_pred CCCcee----ecchHHHHHHHhhcCCCEEEEeecCCccccCCC-cccccccccccchhchHHHHhcCCCCCcccCCcHHH
Q 005047 168 DSSGIF----WDNDSLAGLLALELKADLLVLLSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAK 242 (716)
Q Consensus 168 ~~g~~~----~~sD~~A~~lA~~L~Ad~Li~~TDVdGVy~~dP-~~p~a~~i~~is~~e~~~~~~~g~~~~~~~ggM~~K 242 (716)
.+|..+ +++|++|+++|.+|+|++|+++|||||||++|| .+|++++|++|+++|+.++...|. ...+
T Consensus 142 ~~g~~~~lgrg~sD~~A~~lA~~l~A~~l~i~tdV~Gv~~~DP~~~~~a~~i~~ls~~ea~~l~~~G~--------~v~~ 213 (401)
T TIGR00656 142 EKGYTTTLGRGGSDYTAALLAAALKADRVDIYTDVPGVYTTDPRVVEAAKRIDKISYEEALELATFGA--------KVLH 213 (401)
T ss_pred CCCCEeecCCCcHHHHHHHHHHHcCCCEEEEEECCCCCCcCCCCCCCCcEECCccCHHHHHHHHHcCC--------cccC
Confidence 133332 589999999999999999999999999999999 489999999999999999877543 3667
Q ss_pred HHHHHHHHHcCCcEEEeeCCCcchHHHHhcCCcceeEEecC
Q 005047 243 VNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRD 283 (716)
Q Consensus 243 l~aa~~a~~~gi~v~I~~g~~~~~l~~~~tg~~iGT~i~~~ 283 (716)
.+++..|.+++||++|.|++.|+ .||++...
T Consensus 214 ~~a~~~a~~~~i~i~i~~~~~~~----------~gT~I~~~ 244 (401)
T TIGR00656 214 PRTVEPAMRSGVPIEVRSSFDPE----------EGTLITNS 244 (401)
T ss_pred HHHHHHHHHCCCeEEEEECCCCC----------CCeEEEeC
Confidence 89999999999999999998874 37887644
No 189
>PRK08210 aspartate kinase I; Reviewed
Probab=99.93 E-value=1.2e-24 Score=240.41 Aligned_cols=232 Identities=20% Similarity=0.281 Sum_probs=173.9
Q ss_pred cCeEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhH-----HHhhhhhcccCCccccccccc
Q 005047 14 VKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGR-----QRLRYRKLVNSSLADLQKPQN 88 (716)
Q Consensus 14 ~~~iVIKiGGs~l~~~~~~~~~~~~~~~a~~I~~l~~~G~~vvIVhGGg~~i~~-----~~~~~~~~~~~~~~~~~~~~~ 88 (716)
|+++|||||||++++++ .+.+++++|+.+.+.|+++||||||+++.|+ .+++...... + ....
T Consensus 1 m~~iViK~GGs~l~~~~------~~~~~~~~i~~~~~~g~~~vvV~sa~g~~G~~~~t~~l~~~~~~~~--~-~~~~--- 68 (403)
T PRK08210 1 MKIIVQKFGGTSVSTEE------RRKMAVNKIKKALKEGYKVVVVVSAMGRKGDPYATDTLLSLVGEEF--S-EISK--- 68 (403)
T ss_pred CCeEEEeECCcccCCHH------HHHHHHHHHHHHHHcCCCEEEEEeCCCCCCCCCccHHHHHHHHHhc--c-CCCh---
Confidence 46899999999999764 4789999999999999999999977666544 2222111100 0 0000
Q ss_pred chhHHHHHHhchHHHHHHHHHHhccCCCccceE------EecCccCCchhhHhHHHHHHHHHHhCCCeEEeeCCCceecC
Q 005047 89 ELDGKACAAVGQSSLMALYDTLFSQLDVTSSQL------LVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTR 162 (716)
Q Consensus 89 ~l~~~~~~a~g~~~~~~~~~~~l~~~gi~~~~~------~~~~~~~~~~~~~~~~~~~i~~ll~~g~iPV~~g~d~v~~~ 162 (716)
-..+.+.++|+.....++...|..+|+++..+ +++.+++.+......+.+.+..+++.|.|||++|.-+. .
T Consensus 69 -~~~~~l~~~Ge~~s~~~~~~~l~~~Gi~a~~l~~~~~~~~t~~~~~~~~v~~~~~~~l~~~l~~~~vpVi~G~~~~-~- 145 (403)
T PRK08210 69 -REQDLLMSCGEIISSVVFSNMLNENGIKAVALTGGQAGIITDDNFTNAKIIEVNPDRILEALEEGDVVVVAGFQGV-T- 145 (403)
T ss_pred -HHHHHHHhHhHHHHHHHHHHHHHhCCCCeEEechHHccEEccCCCCceeeehhhHHHHHHHHhcCCEEEeeCeeec-C-
Confidence 01235788999888878889999999987654 44555554333233457899999999999999982111 1
Q ss_pred CCCCCCCCcee----ecchHHHHHHHhhcCCCEEEEeecCCccccCCCc-ccccccccccchhchHHHHhcCCCCCcccC
Q 005047 163 KAPYEDSSGIF----WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRG 237 (716)
Q Consensus 163 ~~~~~~~g~~~----~~sD~~A~~lA~~L~Ad~Li~~TDVdGVy~~dP~-~p~a~~i~~is~~e~~~~~~~g~~~~~~~g 237 (716)
..|..+ +++|++|+++|.+|+|++|+|+|||||||++||+ +|++++|++|+++|+.++...|++
T Consensus 146 -----~~g~~~~l~rg~sD~~A~~lA~~l~A~~l~i~tDV~GV~~~dP~~~~~a~~i~~ls~~ea~~l~~~G~~------ 214 (403)
T PRK08210 146 -----ENGDITTLGRGGSDTTAAALGVALKAEYVDIYTDVDGIMTADPRIVEDARLLDVVSYNEVFQMAYQGAK------ 214 (403)
T ss_pred -----CCCCEEEeCCCchHHHHHHHHHHcCCCEEEEEECCCCCCcCCCCcCCCCeECCccCHHHHHHHHHCCcc------
Confidence 134432 4899999999999999999999999999999994 899999999999999998776543
Q ss_pred CcHHHHHHHHHHHHcCCcEEEeeCCCcchHHHHhcCCcceeEEecC
Q 005047 238 GMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRD 283 (716)
Q Consensus 238 gM~~Kl~aa~~a~~~gi~v~I~~g~~~~~l~~~~tg~~iGT~i~~~ 283 (716)
..|.+++..+.++++|++|.|.+.++ .||++...
T Consensus 215 --v~~~~a~~~~~~~~i~i~i~~~~~~~----------~gT~I~~~ 248 (403)
T PRK08210 215 --VIHPRAVEIAMQANIPLRIRSTYSDS----------PGTLITSL 248 (403)
T ss_pred --ccCHHHHHHHHHCCCeEEEEecCCCc----------CCcEEEec
Confidence 45678899999999999999987532 39988754
No 190
>PRK06635 aspartate kinase; Reviewed
Probab=99.92 E-value=1.6e-24 Score=239.94 Aligned_cols=232 Identities=22% Similarity=0.278 Sum_probs=174.0
Q ss_pred cCeEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhcccCCcccccccccchhHH
Q 005047 14 VKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGK 93 (716)
Q Consensus 14 ~~~iVIKiGGs~l~~~~~~~~~~~~~~~a~~I~~l~~~G~~vvIVhGGg~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 93 (716)
|+++|+||||+++.++ +.+.+++++|+.+.+.|.++||||||++..+..++....... ...+ .-..+
T Consensus 1 m~~iViK~GGs~l~~~------~~~~~~~~~i~~~~~~g~~~vvV~sg~~~~~~~l~~~~~~~~-~~~~------~~~~~ 67 (404)
T PRK06635 1 MALIVQKFGGTSVGDV------ERIKRVAERVKAEVEAGHQVVVVVSAMGGTTDELLDLAKEVS-PLPD------PRELD 67 (404)
T ss_pred CCeEEEeECCcccCCH------HHHHHHHHHHHHHHHcCCCEEEEEeCCCCcHHHHHHHHHHhc-cCCC------HHHHH
Confidence 4689999999999864 368999999999999999999999986666655543322110 0001 11234
Q ss_pred HHHHhchHHHHHHHHHHhccCCCccc-----eE-EecCccCCchhhHhHHHHHHHHHHhCCCeEEeeCCCceecCCCCCC
Q 005047 94 ACAAVGQSSLMALYDTLFSQLDVTSS-----QL-LVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYE 167 (716)
Q Consensus 94 ~~~a~g~~~~~~~~~~~l~~~gi~~~-----~~-~~~~~~~~~~~~~~~~~~~i~~ll~~g~iPV~~g~d~v~~~~~~~~ 167 (716)
.+.++|+..+..++...|...|+++. ++ ++++.+|.+......+.+.++.+++.|.|||++|+-+..
T Consensus 68 ~~~~~Ge~~~~~~~~~~l~~~g~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ipVi~g~~~~~------- 140 (404)
T PRK06635 68 MLLSTGEQVSVALLAMALQSLGVKARSFTGWQAGIITDSAHGKARITDIDPSRIREALDEGDVVVVAGFQGVD------- 140 (404)
T ss_pred HHhhhhHHHHHHHHHHHHHhCCCCeEEeChhhCCEEecCCCCceEeeecCHHHHHHHHhCCCEEEecCccEeC-------
Confidence 77888988887788899999998863 33 344444543232333468899999999999998821111
Q ss_pred CCCcee----ecchHHHHHHHhhcCCCEEEEeecCCccccCCC-cccccccccccchhchHHHHhcCCCCCcccCCcHHH
Q 005047 168 DSSGIF----WDNDSLAGLLALELKADLLVLLSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAK 242 (716)
Q Consensus 168 ~~g~~~----~~sD~~A~~lA~~L~Ad~Li~~TDVdGVy~~dP-~~p~a~~i~~is~~e~~~~~~~g~~~~~~~ggM~~K 242 (716)
..|... +++|++|+++|.+|+||+|+++|||||||++|| .+|++++|++|+++|+.++... |.+..|
T Consensus 141 ~~g~~~~l~rg~sD~~A~~lA~~l~A~~l~~~tDV~Gv~~~dP~~~~~a~~i~~i~~~e~~~l~~~--------g~~~~~ 212 (404)
T PRK06635 141 EDGEITTLGRGGSDTTAVALAAALKADECEIYTDVDGVYTTDPRIVPKARKLDKISYEEMLELASL--------GAKVLH 212 (404)
T ss_pred CCCCEEecCCCChHHHHHHHHHHhCCCEEEEEEcCCCCCcCCCCCCCCceECCccCHHHHHHHHHc--------CCcccC
Confidence 133332 489999999999999999999999999999999 4799999999999999987653 344678
Q ss_pred HHHHHHHHHcCCcEEEeeCCCcchHHHHhcCCcceeEEecC
Q 005047 243 VNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRD 283 (716)
Q Consensus 243 l~aa~~a~~~gi~v~I~~g~~~~~l~~~~tg~~iGT~i~~~ 283 (716)
.+++..+.++|++++|.|++.+ ..||++...
T Consensus 213 ~~a~~~~~~~~i~~~i~~~~~~----------~~gT~i~~~ 243 (404)
T PRK06635 213 PRSVEYAKKYNVPLRVRSSFSD----------NPGTLITGE 243 (404)
T ss_pred HHHHHHHHHcCceEEEEcCCCC----------CCCCEEeeC
Confidence 8899999999999999998743 248888655
No 191
>PRK09411 carbamate kinase; Reviewed
Probab=99.92 E-value=6.6e-24 Score=218.06 Aligned_cols=242 Identities=21% Similarity=0.266 Sum_probs=171.4
Q ss_pred CeEEEEeCCcccccCCC--cc--cHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhcccCCcccccccccch
Q 005047 15 KRLVVKVGTAVVTRSDG--RL--ALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNEL 90 (716)
Q Consensus 15 ~~iVIKiGGs~l~~~~~--~~--~~~~~~~~a~~I~~l~~~G~~vvIVhGGg~~i~~~~~~~~~~~~~~~~~~~~~~~~l 90 (716)
+++||.|||++|...+. +. ++.+++..++.|+.|.+. |++||+||.|||+|...++...... . ..+.|
T Consensus 2 ~~iVvAlGGNAl~~~g~~~~~~~q~~~v~~~a~~ia~l~~~-~~~vitHGNGPQVG~l~~~~~~~~~-----~--~~~pl 73 (297)
T PRK09411 2 KTLVVALGGNALLQRGEALTAENQYRNIASAVPALARLARS-YRLAIVHGNGPQVGLLALQNLAWKE-----V--EPYPL 73 (297)
T ss_pred CeEEEEcCchhhcCCCCCcCHHHHHHHHHHHHHHHHHHHHc-CCEEEEeCCccHHHHHHHHHHhhcC-----C--CCCCc
Confidence 68999999999987543 22 345889999999999988 9999999999999987665332211 1 22344
Q ss_pred hHHHHHHhchHHHHHHHHHHhccCCCc--cc----eEEecCcc--CC-----------------------------chhh
Q 005047 91 DGKACAAVGQSSLMALYDTLFSQLDVT--SS----QLLVTDSD--FR-----------------------------DEDF 133 (716)
Q Consensus 91 ~~~~~~a~g~~~~~~~~~~~l~~~gi~--~~----~~~~~~~~--~~-----------------------------~~~~ 133 (716)
+-..+.+.|..+.+ ++..|...++. +. |+.+...| |. +.++
T Consensus 74 d~~~a~sqG~iGy~--l~q~l~~~~~~~~v~t~~Tq~~Vd~~DpaF~~PtKpiG~~y~~e~a~~l~~e~g~~~~~dg~g~ 151 (297)
T PRK09411 74 DVLVAESQGMIGYM--LAQSLSAQPQMPPVTTVLTRIEVSPDDPAFLQPEKFIGPVYQPEEQEALEAAYGWQMKRDGKYL 151 (297)
T ss_pred hhhhhhcccHHHHH--HHHHHHHcCCCCCeEEEEEEEEECCCCccccCCCCccCCccCHHHHHHHHHhcCCEEEecCCce
Confidence 34455566666643 34555444432 11 22222111 11 0111
Q ss_pred Hh----------HHHHHHHHHHhCCCeEEeeCCCceecCCCCCCCCCcee-ecchHHHHHHHhhcCCCEEEEeecCCccc
Q 005047 134 RK----------QLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIF-WDNDSLAGLLALELKADLLVLLSDVEGLY 202 (716)
Q Consensus 134 ~~----------~~~~~i~~ll~~g~iPV~~g~d~v~~~~~~~~~~g~~~-~~sD~~A~~lA~~L~Ad~Li~~TDVdGVy 202 (716)
++ ++.+.|+.|+++|+|||..|...+... ....|... +|+|.+|+.||.+|+||+|+|+|||||||
T Consensus 152 rrVVpSP~P~~iVe~~~I~~Ll~~G~IVI~~gGGGIPV~---~~~~G~e~vIDkD~~Aa~LA~~L~Ad~LIiLTDVdGV~ 228 (297)
T PRK09411 152 RRVVASPQPRKILDSEAIELLLKEGHVVICSGGGGVPVT---EDGAGSEAVIDKDLAAALLAEQINADGLVILTDADAVY 228 (297)
T ss_pred EEEccCCCCcceECHHHHHHHHHCCCEEEecCCCCCCeE---EcCCCeEEecCHHHHHHHHHHHhCCCEEEEEeCchhhc
Confidence 11 457999999999999888763332221 11123333 99999999999999999999999999999
Q ss_pred cCCCcccccccccccchhchHHHHhcCCCCCcccCCcHHHHHHHHHHHHcC-CcEEEeeCCCcchHHHHhcCCcceeEEe
Q 005047 203 SGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAG-IPVVITSGFAMDSIIKVLEGKRVGTLFH 281 (716)
Q Consensus 203 ~~dP~~p~a~~i~~is~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a~~~g-i~v~I~~g~~~~~l~~~~tg~~iGT~i~ 281 (716)
+++ .+|++++|++++.+|+.+++. .+|||.||+++|+.+++.+ .+++|.+ ++.+.+++.|+ .||.+.
T Consensus 229 ~n~-~~p~~~~I~~it~~e~~~~~~-------~~GgM~pKVeAA~~~v~~~g~~a~I~~---l~~~~~~l~G~-~GT~I~ 296 (297)
T PRK09411 229 ENW-GTPQQRAIRHATPDELAPFAK-------ADGAMGPKVTAVSGYVRSRGKPAWIGA---LSRIEETLAGE-AGTCIS 296 (297)
T ss_pred cCC-CCCCCcCCCCcCHHHHHHhcc-------CCCCcHHHHHHHHHHHHhCCCeEEECC---hhHHHHHHCCC-CCeEEe
Confidence 875 478889999999999876432 4899999999999888864 5599975 67788888887 699874
No 192
>COG0527 LysC Aspartokinases [Amino acid transport and metabolism]
Probab=99.91 E-value=1.5e-23 Score=230.42 Aligned_cols=239 Identities=22% Similarity=0.298 Sum_probs=182.1
Q ss_pred CeEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhccc-----------------
Q 005047 15 KRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVN----------------- 77 (716)
Q Consensus 15 ~~iVIKiGGs~l~~~~~~~~~~~~~~~a~~I~~l~~~G~~vvIVhGGg~~i~~~~~~~~~~~~----------------- 77 (716)
+++|.||||+++.+.+ ++.+.++.|+...+.|.++|+|+++++.++..++.......
T Consensus 2 ~~iV~KFGGTSva~~e------~i~~va~iv~~~~~~g~~vVVVvSA~~~vTd~Lv~~a~~~~~~~~~~~~~~~~~~~~e 75 (447)
T COG0527 2 RLIVQKFGGTSVADAE------RILRVADIVKEDSEEGVKVVVVVSAMGGVTDLLVALAEGAESGRDAVAEQRHRDIASE 75 (447)
T ss_pred ceEEEEeCCcccCCHH------HHHHHHHHHHhhhhcCCcEEEEECCCCCchHHHHHHHhhcccccchhHHHHHHHHHHH
Confidence 4899999999998743 68999999999888899999999998767776655444211
Q ss_pred --CCccc---ccccc----------------cchhHHHHHHhchHHHHHHHHHHhccCCCccceE------EecCccCCc
Q 005047 78 --SSLAD---LQKPQ----------------NELDGKACAAVGQSSLMALYDTLFSQLDVTSSQL------LVTDSDFRD 130 (716)
Q Consensus 78 --~~~~~---~~~~~----------------~~l~~~~~~a~g~~~~~~~~~~~l~~~gi~~~~~------~~~~~~~~~ 130 (716)
..+.. +.... ..-..+.+.+.|+.....++...|...|+++..+ +.++..+.+
T Consensus 76 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~ilS~GE~~Sa~lla~~L~~~Gv~A~~~~~~~~~i~t~~~~~~ 155 (447)
T COG0527 76 LILDPFIAARLAEVIAEFKKVLLGIALLGEVSPRERDELLSLGERLSAALLAAALNALGVDARSLDGRQAGIATDSNHGN 155 (447)
T ss_pred HhhcchhhhhHhhhHhhhhHHhhhhhhccCCCHHHHHHHHhhchHHHHHHHHHHHHhCCCceEEEchHHceeeecCcccc
Confidence 00000 00000 0011257889999999999999999999886533 334445555
Q ss_pred hhhHhHHHHH-HHHHHhCCCeEEeeCCCceecCCCCCCCCCce--e--ecchHHHHHHHhhcCCCEEEEeecCCccccCC
Q 005047 131 EDFRKQLYDT-VQSLLDLRVIPIFNENDAVSTRKAPYEDSSGI--F--WDNDSLAGLLALELKADLLVLLSDVEGLYSGP 205 (716)
Q Consensus 131 ~~~~~~~~~~-i~~ll~~g~iPV~~g~d~v~~~~~~~~~~g~~--~--~~sD~~A~~lA~~L~Ad~Li~~TDVdGVy~~d 205 (716)
........+. +..+++.|.|||+.|+-... ..|.. + ++||+.|++||..|+||++.++|||||||+.|
T Consensus 156 a~i~~~~~~~~l~~~~~~~~v~Vv~GF~G~~-------~~G~~tTLGRGGSD~SA~~laa~l~Ad~~~I~TDVdGI~TaD 228 (447)
T COG0527 156 ARILDEDSERRLLRLLEEGKVPVVAGFQGIN-------EDGETTTLGRGGSDYSAAALAAALGADEVEIWTDVDGVYTAD 228 (447)
T ss_pred cccchhhhhhhHHHHhcCCcEEEecCceeec-------CCCCEEEeCCCcHHHHHHHHHHHcCCCEEEEEECCCCCccCC
Confidence 4443333455 88899999999999832222 13332 3 89999999999999999999999999999999
Q ss_pred C-cccccccccccchhchHHHHhcCCCCCcccCCcHHHHHHHHHHHHcCCcEEEeeCCCcchHHHHhcCCcceeEEecC
Q 005047 206 P-SEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRD 283 (716)
Q Consensus 206 P-~~p~a~~i~~is~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a~~~gi~v~I~~g~~~~~l~~~~tg~~iGT~i~~~ 283 (716)
| ..|++++|++|||+|+.++...|++ .-+.++...+.+++||++|.|.+.|+ ..||+|...
T Consensus 229 PRiVp~Ar~i~~isyeEa~ELA~~GAk--------VLHprav~pa~~~~Ip~~i~~t~~p~---------~~GTlI~~~ 290 (447)
T COG0527 229 PRIVPDARLLPEISYEEALELAYLGAK--------VLHPRAVEPAMRSGIPLRIKNTFNPD---------APGTLITAE 290 (447)
T ss_pred CCCCCcceEcCccCHHHHHHHHHCCch--------hcCHHHHHHHHhcCCcEEEEecCCCC---------CCceEEecC
Confidence 9 4999999999999999998887765 34568999999999999999988775 379999987
No 193
>COG0549 ArcC Carbamate kinase [Amino acid transport and metabolism]
Probab=99.91 E-value=1.4e-22 Score=201.85 Aligned_cols=255 Identities=23% Similarity=0.319 Sum_probs=187.0
Q ss_pred CeEEEEeCCcccccCCCc----ccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhcccCCcccccccccch
Q 005047 15 KRLVVKVGTAVVTRSDGR----LALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNEL 90 (716)
Q Consensus 15 ~~iVIKiGGs~l~~~~~~----~~~~~~~~~a~~I~~l~~~G~~vvIVhGGg~~i~~~~~~~~~~~~~~~~~~~~~~~~l 90 (716)
+++||.|||++|-..+.. -+.++++..+++|+.|.+.|+++||.||.|||+|..+++...... .. ....+.|
T Consensus 1 ~~iVvALGGNAll~~g~~~tae~Q~~~v~~ta~~i~~l~~~g~e~VitHGNGPQVG~l~lq~~aa~~--~~--~~p~~PL 76 (312)
T COG0549 1 KRIVVALGGNALLQRGEPLTAEAQYEAVKITAEQIADLIASGYEVVITHGNGPQVGLLLLQNEAADS--EK--GVPAYPL 76 (312)
T ss_pred CeEEEEecchhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCeEEEEcCCCchHHHHHHHhhhhcc--cc--CCCCccH
Confidence 579999999999876432 246889999999999999999999999999999987765322110 00 1222344
Q ss_pred hHHHHHHhchHHHH--HHHHHHhccCCCc--c----ceEEecCcc--CC------------------------------c
Q 005047 91 DGKACAAVGQSSLM--ALYDTLFSQLDVT--S----SQLLVTDSD--FR------------------------------D 130 (716)
Q Consensus 91 ~~~~~~a~g~~~~~--~~~~~~l~~~gi~--~----~~~~~~~~~--~~------------------------------~ 130 (716)
+-..+.+.|+.+.+ ..+.+.|...++. + .|+.+..+| |. +
T Consensus 77 d~~~AmsQG~IGy~l~qal~n~l~~~~~~~~v~tvvTqv~VD~nDPAF~nPtKpIGpfY~~eea~~l~~~~gw~~keD~~ 156 (312)
T COG0549 77 DVLVAMSQGMIGYMLQQALRNELPRRGLEKPVVTVVTQVEVDANDPAFLNPTKPIGPFYSEEEAEELAKEYGWVFKEDAG 156 (312)
T ss_pred HHHhHhhhhHHHHHHHHHHHHHHhhcCCCCceeEEEEEEEEcCCCccccCCCCCCCCCcCHHHHHHHHhhcCcEEEecCC
Confidence 44466666666644 3456777777753 1 133332221 11 1
Q ss_pred hhhHh----------HHHHHHHHHHhCCCeEEeeCCCceecCCCCCCCCCc-eeecchHHHHHHHhhcCCCEEEEeecCC
Q 005047 131 EDFRK----------QLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSG-IFWDNDSLAGLLALELKADLLVLLSDVE 199 (716)
Q Consensus 131 ~~~~~----------~~~~~i~~ll~~g~iPV~~g~d~v~~~~~~~~~~g~-~~~~sD~~A~~lA~~L~Ad~Li~~TDVd 199 (716)
+++++ ...+.|+.|+++|.++|..|...|....-..+-.|. .++|.|..+++||.+++||.|+++||||
T Consensus 157 rG~RRVVpSP~P~~IvE~~~Ik~L~~~g~vVI~~GGGGIPVv~~~~~~~GVeAVIDKDlasalLA~~i~AD~liILTdVd 236 (312)
T COG0549 157 RGYRRVVPSPKPVRIVEAEAIKALLESGHVVIAAGGGGIPVVEEGAGLQGVEAVIDKDLASALLAEQIDADLLIILTDVD 236 (312)
T ss_pred CCeeEecCCCCCccchhHHHHHHHHhCCCEEEEeCCCCcceEecCCCcceeeEEEccHHHHHHHHHHhcCCEEEEEeccc
Confidence 21221 346899999999999999987666553321111122 2499999999999999999999999999
Q ss_pred ccccCCCcccccccccccchhchHHHHhcCCCCCcccCCcHHHHHHHHHHHHcC-CcEEEeeCCCcchHHHHhcCCccee
Q 005047 200 GLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAG-IPVVITSGFAMDSIIKVLEGKRVGT 278 (716)
Q Consensus 200 GVy~~dP~~p~a~~i~~is~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a~~~g-i~v~I~~g~~~~~l~~~~tg~~iGT 278 (716)
+||.++. .|+.+.|++++.+|+++++..+ .+..|+|.|||+||+..++++ -+++|.+ .+.+.+.+.|+ .||
T Consensus 237 ~Vy~n~g-kp~q~~L~~v~~~e~~~yl~eg---~Fa~GSM~PKVeAai~Fv~~~gk~A~Its---Le~~~~~l~g~-~GT 308 (312)
T COG0549 237 AVYVNFG-KPNQQALDRVTVDEMEKYLAEG---QFAAGSMGPKVEAAISFVENTGKPAIITS---LENAEAALEGK-AGT 308 (312)
T ss_pred hheecCC-CccchhhcccCHHHHHHHHhcC---CCCCCCccHHHHHHHHHHHcCCCceEECc---HHHHHHHhccC-CCc
Confidence 9998875 6778999999999999988764 689999999999999999874 4599987 78888888886 788
Q ss_pred EEe
Q 005047 279 LFH 281 (716)
Q Consensus 279 ~i~ 281 (716)
.+.
T Consensus 309 ~I~ 311 (312)
T COG0549 309 VIV 311 (312)
T ss_pred Eec
Confidence 875
No 194
>PRK07431 aspartate kinase; Provisional
Probab=99.91 E-value=2.1e-23 Score=241.14 Aligned_cols=234 Identities=21% Similarity=0.270 Sum_probs=171.5
Q ss_pred cCeEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhcccCCcccccccccchhHH
Q 005047 14 VKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGK 93 (716)
Q Consensus 14 ~~~iVIKiGGs~l~~~~~~~~~~~~~~~a~~I~~l~~~G~~vvIVhGGg~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 93 (716)
|+++|+||||+++.+. +.+.+++++|+.+.+.|+++||||||++.+.+.+.......... ...+ ..+
T Consensus 1 m~~iViKfGGss~~~~------~~i~~~a~~I~~~~~~g~~vvvV~sa~g~~t~~l~~~~~~~t~~-~~~~------~~~ 67 (587)
T PRK07431 1 MALIVQKFGGTSVGSV------ERIQAVAQRIARTKEAGNDVVVVVSAMGKTTDELVKLAKEISSN-PPRR------EMD 67 (587)
T ss_pred CCeEEEEECchhcCCH------HHHHHHHHHHHHHHHCCCCEEEEECCCCchhHHHHHHHHHhccC-CCHH------HHH
Confidence 3589999999999763 46899999999999999999999997666665544322211100 0011 124
Q ss_pred HHHHhchHHHHHHHHHHhccCCCccceE------EecCccCCchhhHhHHHHHHHHHHhCCCeEEeeCCCceecCCCCCC
Q 005047 94 ACAAVGQSSLMALYDTLFSQLDVTSSQL------LVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYE 167 (716)
Q Consensus 94 ~~~a~g~~~~~~~~~~~l~~~gi~~~~~------~~~~~~~~~~~~~~~~~~~i~~ll~~g~iPV~~g~d~v~~~~~~~~ 167 (716)
.+.+.|+.....++...|...|+++..+ +++++.+..........+.+.++++.|.|||++|.......
T Consensus 68 ~~ls~Ge~~s~~l~~~~l~~~gi~a~~l~~~~~~~~~~~~~~~~~i~~~~~~~l~~~l~~g~vpVv~g~~g~~~~----- 142 (587)
T PRK07431 68 MLLSTGEQVSIALLSMALHELGQPAISLTGAQVGIVTESEHGRARILEIKTDRIQRHLDAGKVVVVAGFQGISLS----- 142 (587)
T ss_pred HHHHHhHHHHHHHHHHHHHHCCCCeEEechhHcCeEecCCCCceeeeeccHHHHHHHHhCCCeEEecCCcCCCCC-----
Confidence 6778888777777888898999875433 23333332211122345789999999999999973222110
Q ss_pred CCCce----eecchHHHHHHHhhcCCCEEEEeecCCccccCCC-cccccccccccchhchHHHHhcCCCCCcccCCcHHH
Q 005047 168 DSSGI----FWDNDSLAGLLALELKADLLVLLSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAK 242 (716)
Q Consensus 168 ~~g~~----~~~sD~~A~~lA~~L~Ad~Li~~TDVdGVy~~dP-~~p~a~~i~~is~~e~~~~~~~g~~~~~~~ggM~~K 242 (716)
..|.. ++++|++|+++|.+|+|++|+++|||||||++|| .+|++++|++|+++|+.++...| .++|.
T Consensus 143 ~~g~~~~lgrggsD~~A~~lA~~l~A~~l~i~TDVdGVyt~DP~~~~~a~~i~~i~~~e~~el~~~G------~~v~~-- 214 (587)
T PRK07431 143 SNLEITTLGRGGSDTSAVALAAALGADACEIYTDVPGVLTTDPRLVPEAQLMDEISCDEMLELASLG------ASVLH-- 214 (587)
T ss_pred CCCCEeecCCCchHHHHHHHHHHcCCCEEEEEeCCCccCcCCCCCCCCCeECCCcCHHHHHHHHhCC------CceEh--
Confidence 01222 2689999999999999999999999999999999 58999999999999999877644 55675
Q ss_pred HHHHHHHHHcCCcEEEeeCCCcchHHHHhcCCcceeEEecC
Q 005047 243 VNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRD 283 (716)
Q Consensus 243 l~aa~~a~~~gi~v~I~~g~~~~~l~~~~tg~~iGT~i~~~ 283 (716)
++++..+.++|||++|.|++. + ..||++...
T Consensus 215 ~~a~~~~~~~~i~i~i~~~~~-~---------~~GT~i~~~ 245 (587)
T PRK07431 215 PRAVEIARNYGVPLVVRSSWS-D---------APGTLVTSP 245 (587)
T ss_pred HHHHHHHHHcCCcEEEecCCC-C---------CCCeEEEeC
Confidence 689999999999999999872 1 259998765
No 195
>cd04244 AAK_AK-LysC-like AAK_AK-LysC-like: Amino Acid Kinase Superfamily (AAK), AK-LysC-like; this CD includes the N-terminal catalytic aspartokinase (AK) domain of the lysine-sensitive AK isoenzyme found in higher plants. The lysine-sensitive AK isoenzyme is a monofunctional protein. It is involved in the overall regulation of the aspartate pathway and can be synergistically inhibited by S-adenosylmethionine. Also included in this CD is an uncharacterized LysC-like AK found in Euryarchaeota and some bacteria. AK catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP.
Probab=99.89 E-value=5.4e-22 Score=208.97 Aligned_cols=228 Identities=21% Similarity=0.307 Sum_probs=164.9
Q ss_pred eEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhcccC----Cccc----c----
Q 005047 16 RLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNS----SLAD----L---- 83 (716)
Q Consensus 16 ~iVIKiGGs~l~~~~~~~~~~~~~~~a~~I~~l~~~G~~vvIVhGGg~~i~~~~~~~~~~~~~----~~~~----~---- 83 (716)
++|+||||+++.+. +.+.++++.|... ..+.++|+|+++.+.++..++........ .+.. +
T Consensus 1 ~~V~KFGGtSv~~~------~~~~~v~~iI~~~-~~~~~~vvVvSA~~~iTd~L~~~~~~~~~~~~~~~~~~l~~i~~~h 73 (298)
T cd04244 1 RLVMKFGGTSVGSA------ERIRHVADLVGTY-AEGHEVVVVVSAMGGVTDRLLLAAEAAVSGRIAGVKDFIEILRLRH 73 (298)
T ss_pred CEEEEECcccCCCH------HHHHHHHHHHHHh-hcCCCEEEEEeCCCCcHHHHHHHHHHHhcCCchhHHHHHHHHHHHH
Confidence 47999999999874 3688888888765 45789999999987787765443211100 0000 0
Q ss_pred ---------c------------------cc-------c--cchhHHHHHHhchHHHHHHHHHHhccCCCccceE------
Q 005047 84 ---------Q------------------KP-------Q--NELDGKACAAVGQSSLMALYDTLFSQLDVTSSQL------ 121 (716)
Q Consensus 84 ---------~------------------~~-------~--~~l~~~~~~a~g~~~~~~~~~~~l~~~gi~~~~~------ 121 (716)
. .. . ..-..+.+.+.|+..+..++...|...|+++..+
T Consensus 74 ~~~~~~l~~~~~~~~~~~~i~~~~~~l~~~~~~~~~~~~~~~~~~d~i~s~GE~lSa~lla~~L~~~Gi~a~~l~~~~~~ 153 (298)
T cd04244 74 IKAAKEAISDEEIAEVESIIDSLLEELEKLLYGIAYLGELTPRSRDYIVSFGERLSAPIFSAALRSLGIKARALDGGEAG 153 (298)
T ss_pred HHHHHHhhcchhhHHHHHHHHHHHHHHHHHHHHHHhhhcCCchHhhHhccHhHHHHHHHHHHHHHhCCCCeEEEcHHHcc
Confidence 0 00 0 0001245678898888888899999999876533
Q ss_pred EecCccCCchh----hHhHHHHHHHHHHhCCCeEEeeCCCceecCCCCCCCCCcee----ecchHHHHHHHhhcCCCEEE
Q 005047 122 LVTDSDFRDED----FRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIF----WDNDSLAGLLALELKADLLV 193 (716)
Q Consensus 122 ~~~~~~~~~~~----~~~~~~~~i~~ll~~g~iPV~~g~d~v~~~~~~~~~~g~~~----~~sD~~A~~lA~~L~Ad~Li 193 (716)
+++++++.+.. .+......+..+++.|.|||+.|.- +....|... +++|++|+.+|.+|+|++|+
T Consensus 154 i~t~~~~~~a~~~~~~~~~i~~~l~~ll~~~~vpVv~Gfi-------g~~~~g~~ttlgRggsD~~A~~~A~~l~a~~l~ 226 (298)
T cd04244 154 IITDDNFGNARPLPATYERVRKRLLPMLEDGKIPVVTGFI-------GATEDGAITTLGRGGSDYSATIIGAALDADEIW 226 (298)
T ss_pred eeecCcccccccchhHHHHHHHHHHHHhhcCCEEEEeCcc-------ccCCCCCEEEecCCChHHHHHHHHHHcCCCEEE
Confidence 34555554321 1222234566788999999998710 111234332 69999999999999999999
Q ss_pred EeecCCccccCCC-cccccccccccchhchHHHHhcCCCCCcccCCcHHHHHHHHHHHHcCCcEEEeeCCCcc
Q 005047 194 LLSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMD 265 (716)
Q Consensus 194 ~~TDVdGVy~~dP-~~p~a~~i~~is~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a~~~gi~v~I~~g~~~~ 265 (716)
++|||||||++|| .+|+++.|++|+++|+.++... |++.-+.+++..+.++|||++|.|++.|+
T Consensus 227 i~tdV~Gv~~~dP~~~~~a~~i~~lsy~Ea~el~~~--------Ga~vlhp~ai~~a~~~~Ipi~i~n~~~p~ 291 (298)
T cd04244 227 IWKDVDGVMTADPRIVPEARTIPRLSYAEAMELAYF--------GAKVLHPRTVEPAMEKGIPVRVKNTFNPE 291 (298)
T ss_pred EEECCCCCCCCCCCCCCCCeEcCccCHHHHHHHHhC--------CCcccCHHHHHHHHHcCCcEEEeeCCCCC
Confidence 9999999999999 5899999999999999988764 45677889999999999999999998875
No 196
>TIGR00657 asp_kinases aspartate kinase. The Lys-sensitive enzyme of Bacillus subtilis resembles the E. coli form but is an alpha 2/beta 2 heterotetramer, where the beta subunit is translated from an in-phase alternative initiator at Met-246. This may be a feature of a number of closely related forms, including a paralog from B. subtilis.
Probab=99.89 E-value=5.2e-22 Score=221.96 Aligned_cols=238 Identities=22% Similarity=0.326 Sum_probs=176.7
Q ss_pred eEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhcccCCcc-----ccc------
Q 005047 16 RLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLA-----DLQ------ 84 (716)
Q Consensus 16 ~iVIKiGGs~l~~~~~~~~~~~~~~~a~~I~~l~~~G~~vvIVhGGg~~i~~~~~~~~~~~~~~~~-----~~~------ 84 (716)
++|+||||+++.+.. .+.++++.|......|+++|+|||+.+.++..+.+.......... .+.
T Consensus 2 ~~V~KFGGssv~~~~------~~~~v~~~i~~~~~~~~~~vvVvSA~~~~Td~L~~~~~~~~~~~~~~~~~~i~~~~~~~ 75 (441)
T TIGR00657 2 LIVQKFGGTSVGNAE------RIRRVAKIVLKEKKKGNQVVVVVSAMAGVTDALVELAEQASPGPSKEFLEKIREKHIEI 75 (441)
T ss_pred CEEEEeCcccCCCHH------HHHHHHHHHHHHHhcCCCEEEEEcCCCCCHHHHHHHHHHHhcCCchHHHHHHHHHHHHH
Confidence 579999999998743 688999999988788999999999998888876543322111000 000
Q ss_pred --------------ccc--------cchhHHHHHHhchHHHHHHHHHHhccCCCccceE------EecCccCCchh-hHh
Q 005047 85 --------------KPQ--------NELDGKACAAVGQSSLMALYDTLFSQLDVTSSQL------LVTDSDFRDED-FRK 135 (716)
Q Consensus 85 --------------~~~--------~~l~~~~~~a~g~~~~~~~~~~~l~~~gi~~~~~------~~~~~~~~~~~-~~~ 135 (716)
... .......+.+.|+.....++...|.+.|+++..+ +++++++.... ...
T Consensus 76 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~ils~GE~~s~~l~~~~l~~~Gi~a~~l~~~~~~l~t~~~~~~~~~~~~ 155 (441)
T TIGR00657 76 LERLIPQAIAEELKRLLDAELVLEEKPREMDRILSFGERLSAALLSAALEELGVKAVSLLGGEAGILTDSNFGRARVIIE 155 (441)
T ss_pred HHHhhhHHHHHHHHHHHHHHHhhhcCcchHhheecHHHHHHHHHHHHHHHhCCCCCEEEEcCcceEEecCCCCceeecHh
Confidence 000 0001245667788777777889999999876533 34555554333 344
Q ss_pred HHHHHHHHHHhCCCeEEeeCCCceecCCCCCCCCCcee----ecchHHHHHHHhhcCCCEEEEeecCCccccCCC-cccc
Q 005047 136 QLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIF----WDNDSLAGLLALELKADLLVLLSDVEGLYSGPP-SEPN 210 (716)
Q Consensus 136 ~~~~~i~~ll~~g~iPV~~g~d~v~~~~~~~~~~g~~~----~~sD~~A~~lA~~L~Ad~Li~~TDVdGVy~~dP-~~p~ 210 (716)
.+.+.+..+++.|.|||++|+.+.. ..|... +++|++|+.+|.+|+|++|+++|||||||++|| .+|+
T Consensus 156 ~~~~~l~~~l~~~~vpVv~G~~g~~-------~~g~~~~lgrggsD~~A~~lA~~l~a~~l~~~tDV~Gv~~~DP~~~~~ 228 (441)
T TIGR00657 156 ILTERLEPLLEEGIIPVVAGFQGAT-------EKGETTTLGRGGSDYTAALLAAALKADECEIYTDVDGIYTTDPRIVPD 228 (441)
T ss_pred hhHHHHHHHHhcCCEEEEeCcEeeC-------CCCCEeecCCCchHHHHHHHHHHcCCCEEEEEECCCCCCcCCCCCCCC
Confidence 5678999999999999999821111 133332 479999999999999999999999999999999 4899
Q ss_pred cccccccchhchHHHHhcCCCCCcccCCcHHHHHHHHHHHHcCCcEEEeeCCCcchHHHHhcCCcceeEEecC
Q 005047 211 SKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRD 283 (716)
Q Consensus 211 a~~i~~is~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a~~~gi~v~I~~g~~~~~l~~~~tg~~iGT~i~~~ 283 (716)
++++++|+++|+.++...| .+..+.+++..+.++++|++|.|++.|+ ..||++...
T Consensus 229 a~~i~~is~~ea~el~~~G--------~~v~~~~a~~~~~~~~i~i~i~~~~~~~---------~~GT~I~~~ 284 (441)
T TIGR00657 229 ARRIDEISYEEMLELASFG--------AKVLHPRTLEPAMRAKIPIVVKSTFNPE---------APGTLIVAS 284 (441)
T ss_pred CeECCccCHHHHHHHHhcC--------CcccCHHHHHHHHHcCCeEEEecCCCCC---------CCceEEEeC
Confidence 9999999999999877643 3567888999999999999999998764 359999765
No 197
>PRK08373 aspartate kinase; Validated
Probab=99.89 E-value=7.9e-22 Score=209.62 Aligned_cols=235 Identities=23% Similarity=0.264 Sum_probs=169.3
Q ss_pred ccCeEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhcccC--------------
Q 005047 13 DVKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNS-------------- 78 (716)
Q Consensus 13 ~~~~iVIKiGGs~l~~~~~~~~~~~~~~~a~~I~~l~~~G~~vvIVhGGg~~i~~~~~~~~~~~~~-------------- 78 (716)
+++++|+|||||++.+ . +.++++.|... ..|.++++|+++.+.++..+++.......
T Consensus 2 ~~~m~V~KFGGsSv~~-~-------~~~v~~ii~~~-~~~~~vvVVVSA~~gvTd~L~~l~~~~~~~~l~~i~~~h~~~~ 72 (341)
T PRK08373 2 VEKMIVVKFGGSSVRY-D-------FEEALELVKYL-SEENEVVVVVSALKGVTDKLLKLAETFDKEALEEIEEIHEEFA 72 (341)
T ss_pred CCCCEEEEECCcchHh-H-------HHHHHHHHHHH-hcCCCEEEEecCCchHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 5678999999999976 2 67777777743 45789999999988888776543321100
Q ss_pred -Cc----cc----c-------cccccchhHHHHHHhchHHHHHHHHHHhccCCCccc-----eEEecCccCCchhh----
Q 005047 79 -SL----AD----L-------QKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSS-----QLLVTDSDFRDEDF---- 133 (716)
Q Consensus 79 -~~----~~----~-------~~~~~~l~~~~~~a~g~~~~~~~~~~~l~~~gi~~~-----~~~~~~~~~~~~~~---- 133 (716)
.+ .. + ......-..+.+.++|+..+..++...|...|+++. +++.+++++.+...
T Consensus 73 ~~L~~~~~~~~~~l~~~~~~~~~~~~~~~~D~ils~GE~lSa~lla~~L~~~Gi~a~~l~~~~~i~t~~~~~~a~i~~~~ 152 (341)
T PRK08373 73 KRLGIDLEILSPYLKKLFNSRPDLPSEALRDYILSFGERLSAVLFAEALENEGIKGKVVDPWEILEAKGSFGNAFIDIKK 152 (341)
T ss_pred HHhccchhhHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHCCCceEEEeHHHheeecCCccceeechhh
Confidence 00 00 0 000000112578899999988899999999998765 34556666654322
Q ss_pred HhHHHHHHHHHHhCCCeEEeeCCCceecCCCCCCCCCcee----ecchHHHHHHHhhcCCCEEEEeecCCccccCCCc-c
Q 005047 134 RKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIF----WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-E 208 (716)
Q Consensus 134 ~~~~~~~i~~ll~~g~iPV~~g~d~v~~~~~~~~~~g~~~----~~sD~~A~~lA~~L~Ad~Li~~TDVdGVy~~dP~-~ 208 (716)
...+.+.+..+++.|.|||++|. . +...|... ++||++|+.+|.+|+|++++++|||||||++||+ .
T Consensus 153 s~~~~~~l~~~l~~g~VpVv~Gf-~-------g~~~G~~ttLGRGGSD~tA~~lA~~L~A~~v~i~TDVdGVytaDP~~v 224 (341)
T PRK08373 153 SKRNVKILYELLERGRVPVVPGF-I-------GNLNGFRATLGRGGSDYSAVALGVLLNAKAVLIMSDVEGIYTADPKLV 224 (341)
T ss_pred hhhhHHHHHHHHhCCcEEEEeCC-c-------cCCCCeEEEcCCCchHHHHHHHHHHcCCCEEEEEECCCccCCCCCCCC
Confidence 11345788999999999999982 1 11133322 5899999999999999999999999999999994 8
Q ss_pred cccccccccchhchHHHHhcCCCCCcccCCcHHHHHHHHHHHHcCCcEEEeeCCCcchHHHHhcCCcceeEEecC
Q 005047 209 PNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRD 283 (716)
Q Consensus 209 p~a~~i~~is~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a~~~gi~v~I~~g~~~~~l~~~~tg~~iGT~i~~~ 283 (716)
|++++|++||++|+.++. ..||..+...|...++.+||++|.|.+.| ..||++...
T Consensus 225 ~~A~~i~~isy~Ea~ela---------~~Gakvlhp~ai~~a~~~Ipi~v~~t~~~----------~~GT~I~~~ 280 (341)
T PRK08373 225 PSARLIPYLSYDEALIAA---------KLGMKALHWKAIEPVKGKIPIIFGRTRDW----------RMGTLVSNE 280 (341)
T ss_pred CCCeEcccCCHHHHHHHH---------HCcChhhhHHHHHHHHcCCcEEEecCCCC----------CCCcEEecC
Confidence 999999999999999754 46788877777766555999999997654 247777543
No 198
>TIGR02078 AspKin_pair Pyrococcus aspartate kinase subunit, putative. This family consists of proteins restricted to and found as paralogous pairs (typically close together) in species of Pyrococcus, a hyperthermophilic archaeal genus. Members are always found close to other genes of threonine biosynthesis and appear to represent the Pyrococcal form of aspartate kinase. Alignment to aspartokinase III from E. coli shows that 300 N-terminal and 20 C-terminal amino acids are homologous, but the form in Pyrococcus lacks ~ 100 amino acids in between.
Probab=99.88 E-value=7.9e-22 Score=208.48 Aligned_cols=232 Identities=22% Similarity=0.248 Sum_probs=162.2
Q ss_pred eEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhccc--------CCccc----c
Q 005047 16 RLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVN--------SSLAD----L 83 (716)
Q Consensus 16 ~iVIKiGGs~l~~~~~~~~~~~~~~~a~~I~~l~~~G~~vvIVhGGg~~i~~~~~~~~~~~~--------~~~~~----~ 83 (716)
++|+|||||++.+. +.++++.|....+ +.++++|+|+.+.+++.++....... ..+.+ +
T Consensus 1 m~V~KFGGsSv~~~--------~~~v~~ii~~~~~-~~~~vVVVSA~~gvTd~L~~~~~~~~~~~l~~i~~~h~~~~~~L 71 (327)
T TIGR02078 1 MIVVKFGGSSVRYA--------FEEALELVKSLSE-EKRVIVVVSALKGITDCLIRYANTFDKSAALEIEEIYEEFAKEL 71 (327)
T ss_pred CEEEEECCcchHHH--------HHHHHHHHHHHhc-CCCEEEEeCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 47999999999852 6777777775543 66899999997777776544322100 00000 0
Q ss_pred c-----------------ccccchhHHHHHHhchHHHHHHHHHHhccCCCccceEEecCccCCchhh----HhHHHHHHH
Q 005047 84 Q-----------------KPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDF----RKQLYDTVQ 142 (716)
Q Consensus 84 ~-----------------~~~~~l~~~~~~a~g~~~~~~~~~~~l~~~gi~~~~~~~~~~~~~~~~~----~~~~~~~i~ 142 (716)
. ........+.+.++|+..+..++...+....+++.+++.++++|++... ...+.+.+.
T Consensus 72 ~~~~~~~~~~l~~~~~~~~l~~~~~~d~I~s~GE~lSa~Lla~gi~a~~vd~~~~i~t~~~~~~a~~~~~~~~~~~~~l~ 151 (327)
T TIGR02078 72 GVDLNILSPYLKELFNPPDLPKEALRDYILSLGERLSAVIFAEGINGKVVDPWDIFFAKGDFGNAFIDIKKSKRNAKILY 151 (327)
T ss_pred ccchhhhHHHHHHHHhhhccCChHHHHHHHHHHHHHHHHHHHccCCcEEEcHHHHhccCCcCCceeechhhhHhhHHHHH
Confidence 0 0000112346778888777666666555555555666667666654322 123457788
Q ss_pred HHHhCCCeEEeeCCCceecCCCCCCCCCcee----ecchHHHHHHHhhcCCCEEEEeecCCccccCCC-ccccccccccc
Q 005047 143 SLLDLRVIPIFNENDAVSTRKAPYEDSSGIF----WDNDSLAGLLALELKADLLVLLSDVEGLYSGPP-SEPNSKLIHTY 217 (716)
Q Consensus 143 ~ll~~g~iPV~~g~d~v~~~~~~~~~~g~~~----~~sD~~A~~lA~~L~Ad~Li~~TDVdGVy~~dP-~~p~a~~i~~i 217 (716)
.+++.|.|||++|.- +..+|... +++|++|+.+|.+|+|+.++++|||||||++|| .+|++++|+++
T Consensus 152 ~~l~~g~IpVv~Gf~--------~~~~G~~ttlGRGgSD~~Aa~lA~~L~A~~v~i~TDVdGVytaDP~~v~~A~~i~~l 223 (327)
T TIGR02078 152 EVLESGKIPVIPGFY--------GNLNGYRVTLGRGGSDYSAVALGVLLNSKLVAIMSDVEGIFTADPKLVPSARLIPYL 223 (327)
T ss_pred HHHhCCcEEEEeCCc--------cCCCCeEEEcCCCChHHHHHHHHHhcCCCEEEEEECCCccCCCCCCcCCCceEcccc
Confidence 899999999999821 11133322 589999999999999999999999999999999 58999999999
Q ss_pred chhchHHHHhcCCCCCcccCCcH-HHHHHHHHHHHcCCcEEEeeCCCcchHHHHhcCCcceeEEecC
Q 005047 218 IRAKHQAEITFGDKSRVGRGGMT-AKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRD 283 (716)
Q Consensus 218 s~~e~~~~~~~g~~~~~~~ggM~-~Kl~aa~~a~~~gi~v~I~~g~~~~~l~~~~tg~~iGT~i~~~ 283 (716)
+++|+.++.. .||. .|.+++..+.++|||++|.|.+.|+ .||++...
T Consensus 224 sy~Ea~ela~---------~Gakvlhp~a~~~a~~~~Ipi~I~~t~~~~----------~GT~I~~~ 271 (327)
T TIGR02078 224 SYEEIKIAAK---------LGMKALQWKAADLAKEYKIPVLFGRTRDWR----------MGTLISNR 271 (327)
T ss_pred CHHHHHHHHH---------CCchhhHHHHHHHHHHCCCeEEEEeCCCcC----------CCcEEecC
Confidence 9999986543 3564 6889999999999999999987552 47777654
No 199
>cd04245 AAK_AKiii-YclM-BS AAK_AKiii-YclM-BS: Amino Acid Kinase Superfamily (AAK), AKiii-YclM-BS; this CD includes the N-terminal catalytic aspartokinase (AK) domain of the lysine plus threonine-sensitive aspartokinase isoenzyme AKIII, a monofunctional class enzyme found in Bacilli (Bacillus subtilis YclM) and Clostridia species. Aspartokinase is the first enzyme in the aspartate metabolic pathway and catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP. In Bacillus subtilis (BS), YclM is reported to be a single polypeptide of 50 kD. The Bacillus subtilis 168 AKIII is induced by lysine and repressed by threonine, and it is synergistically inhibited by lysine and threonine.
Probab=99.87 E-value=5.9e-21 Score=199.15 Aligned_cols=226 Identities=19% Similarity=0.195 Sum_probs=160.6
Q ss_pred eEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCChh-------HhhHHHhhhhhcccC--Cccc----
Q 005047 16 RLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAV-------GVGRQRLRYRKLVNS--SLAD---- 82 (716)
Q Consensus 16 ~iVIKiGGs~l~~~~~~~~~~~~~~~a~~I~~l~~~G~~vvIVhGGg~-------~i~~~~~~~~~~~~~--~~~~---- 82 (716)
|.|.||||+++.+.+ .+.++++.|.. .+.+++||+++.+ .++..++........ ....
T Consensus 1 m~V~KFGGtSv~~~~------~i~~v~~ii~~---~~~~~vvVvSA~~~~~~~~~~vTd~L~~~~~~~~~~~~~~~~~~~ 71 (288)
T cd04245 1 MKVVKFGGSSLASAE------QFQKVKAIVKA---DPERKIVVVSAPGKRFKDDTKVTDLLILYAEAVLAGEDTESIFEA 71 (288)
T ss_pred CEEEEECcCccCCHH------HHHHHHHHHHh---cCCCEEEEEcCCCCCCCchhhHHHHHHHHHHHHhcCcchHHHHHH
Confidence 359999999998743 57777777763 3557899999864 366654332111000 0000
Q ss_pred c----------------------------ccc---ccchhHHHHHHhchHHHHHHHHHHhccCCCccceE------EecC
Q 005047 83 L----------------------------QKP---QNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQL------LVTD 125 (716)
Q Consensus 83 ~----------------------------~~~---~~~l~~~~~~a~g~~~~~~~~~~~l~~~gi~~~~~------~~~~ 125 (716)
+ ... ......+.+.+.|+.....++...|+..|+++..+ ++++
T Consensus 72 i~~~h~~~~~~L~~~~~~~~~i~~~~~~l~~~~~~~~~~~~d~i~s~GE~lSa~ll~~~L~~~Gi~a~~ld~~~~~i~t~ 151 (288)
T cd04245 72 IVDRYAEIADELGLPMSILEEIAEILENLANLDYANPDYLLDALKARGEYLNAQLMAAYLNYQGIDARYVIPKDAGLVVT 151 (288)
T ss_pred HHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHhhccCCHHHHHHHHHHhHHHHHHHHHHHHHHCCCCeEEEcHHHCceeec
Confidence 0 000 00112257789999888888999999999886533 3456
Q ss_pred ccCCchhhHhHHHHHHHHHHhCCCeEEeeCCCceecCCCCCCCCCce--e--ecchHHHHHHHhhcCCCEEEEeecCCcc
Q 005047 126 SDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGI--F--WDNDSLAGLLALELKADLLVLLSDVEGL 201 (716)
Q Consensus 126 ~~~~~~~~~~~~~~~i~~ll~~g~iPV~~g~d~v~~~~~~~~~~g~~--~--~~sD~~A~~lA~~L~Ad~Li~~TDVdGV 201 (716)
+++.+........+.+.+.++.+.|||+.|.-+. ...|.. + ++||+.|+.+|.+|+|+.+.++||||||
T Consensus 152 ~~~~~a~~~~~~~~~~~~~~~~~~v~Vv~Gf~g~-------~~~G~~ttLgRggSD~tAal~A~~l~A~~v~i~tdVdGv 224 (288)
T cd04245 152 DEPGNAQILPESYQKIKKLRDSDEKLVIPGFYGY-------SKNGDIKTFSRGGSDITGAILARGFQADLYENFTDVDGI 224 (288)
T ss_pred CCccccccchhhHHHHHHHHhCCCEEEEeCcccc-------CCCCCEEEcCCCchHHHHHHHHHHcCCCEEEEEeCCCce
Confidence 6665444333345678888888999999982111 113333 2 6999999999999999999999999999
Q ss_pred ccCCC-cccccccccccchhchHHHHhcCCCCCcccCCcHHHHHHHHHHHHcCCcEEEeeCCCcc
Q 005047 202 YSGPP-SEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMD 265 (716)
Q Consensus 202 y~~dP-~~p~a~~i~~is~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a~~~gi~v~I~~g~~~~ 265 (716)
|++|| .+|+++.|++||++|+.++..+|++ -|.| .+...+.+++||++|.|.+.|+
T Consensus 225 ytaDPr~v~~A~~i~~lsy~EA~ela~~Gak------Vlhp--~ai~~a~~~~Ipi~v~n~~~p~ 281 (288)
T cd04245 225 YAANPRIVANPKPISEMTYREMRELSYAGFS------VFHD--EALIPAIEAGIPINIKNTNHPE 281 (288)
T ss_pred ECCCCCCCCCCeEeCccCHHHHHHHHHCCCc------ccCH--HHHHHHHHCCCcEEEeeCCCCC
Confidence 99999 5899999999999999998776543 3444 5888899999999999998875
No 200
>cd04257 AAK_AK-HSDH AAK_AK-HSDH: Amino Acid Kinase Superfamily (AAK), AK-HSDH; this CD includes the N-terminal catalytic domain of aspartokinase (AK) of the bifunctional enzyme AK - homoserine dehydrogenase (HSDH). These aspartokinases are found in bacteria (E. coli AKI-HSDHI, ThrA and E. coli AKII-HSDHII, MetL) and higher plants (Z. mays AK-HSDH). AK and HSDH are the first and third enzymes in the biosynthetic pathway of the aspartate family of amino acids. AK catalyzes the phosphorylation of Asp to P-aspartyl phosphate. HSDH catalyzes the NADPH-dependent conversion of Asp 3-semialdehyde to homoserine. ThrA and MetL are involved in threonine and methionine biosynthesis, respectively. In E. coli, ThrA is subject to allosteric regulation by the end product L-threonine and the native enzyme is reported to be tetrameric. As with bacteria, plant AK and HSDH are feedback inhibited by pathway end products. Maize AK-HSDH is a Thr-sensitive 180-kD enzyme. Arabidopsis AK-HSDH is an alanine-act
Probab=99.87 E-value=3.6e-21 Score=201.96 Aligned_cols=228 Identities=19% Similarity=0.256 Sum_probs=162.0
Q ss_pred eEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhcccCC-------cccc-----
Q 005047 16 RLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSS-------LADL----- 83 (716)
Q Consensus 16 ~iVIKiGGs~l~~~~~~~~~~~~~~~a~~I~~l~~~G~~vvIVhGGg~~i~~~~~~~~~~~~~~-------~~~~----- 83 (716)
+.|.||||+++.+.. ++.++++.|.... ++.++++|+++.+.++..++......... +..+
T Consensus 1 m~V~KFGGtSv~~~~------~i~~v~~iI~~~~-~~~~~vvVvSA~~gvTd~L~~~~~~~~~~~~~~~~~l~~i~~~h~ 73 (294)
T cd04257 1 MKVLKFGGTSLANAE------RIRRVADIILNAA-KQEQVAVVVSAPGKVTDLLLELAELASSGDDAYEDILQELESKHL 73 (294)
T ss_pred CEEEEeCccccCCHH------HHHHHHHHHHhhc-cCCCEEEEEcCCCCcHHHHHHHHHHHhcCChhHHHHHHHHHHHHH
Confidence 369999999998743 5888888887554 46789999999877887654432211000 0000
Q ss_pred ---cc--------------------cc------------cchhHHHHHHhchHHHHHHHHHHhccCCCccc-----eEEe
Q 005047 84 ---QK--------------------PQ------------NELDGKACAAVGQSSLMALYDTLFSQLDVTSS-----QLLV 123 (716)
Q Consensus 84 ---~~--------------------~~------------~~l~~~~~~a~g~~~~~~~~~~~l~~~gi~~~-----~~~~ 123 (716)
.. .. .....+.+.+.|+..+..++...|.+.|+++. ++++
T Consensus 74 ~~~~~l~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~~~d~ils~GE~lSa~lla~~L~~~Gi~a~~ld~~~~i~ 153 (294)
T cd04257 74 DLITELLSGDAAAELLSALGNDLEELKDLLEGIYLLGELPDSIRAKVLSFGERLSARLLSALLNQQGLDAAWIDARELIV 153 (294)
T ss_pred HHHHHhhcchhhHHHHHHHHHHHHHHHHHHHHHHhhccCChhHhhhheeHHHHHHHHHHHHHHHhCCCCeEEEchHHeeE
Confidence 00 00 00112466788998888899999999998764 3456
Q ss_pred cCccCCchhhHh-HHHHHHHHHHhC-CCeEEeeCCCceecCCCCCCCCCce--e--ecchHHHHHHHhhcCCCEEEEeec
Q 005047 124 TDSDFRDEDFRK-QLYDTVQSLLDL-RVIPIFNENDAVSTRKAPYEDSSGI--F--WDNDSLAGLLALELKADLLVLLSD 197 (716)
Q Consensus 124 ~~~~~~~~~~~~-~~~~~i~~ll~~-g~iPV~~g~d~v~~~~~~~~~~g~~--~--~~sD~~A~~lA~~L~Ad~Li~~TD 197 (716)
+++++.+..... ...+.++.++.. +.|||+.|+-+. +..|.. + ++||++|+++|..|+|+.|+++||
T Consensus 154 t~~~~~~a~~~~~~~~~~l~~~~~~~~~v~Vv~Gfig~-------~~~G~~ttlGRGGSD~~A~~lA~~l~a~~l~i~td 226 (294)
T cd04257 154 TDGGYLNAVVDIELSKERIKAWFSSNGKVIVVTGFIAS-------NPQGETTTLGRNGSDYSAAILAALLDADQVEIWTD 226 (294)
T ss_pred ecCCCCceEechHhhHHHHHHHHhcCCCEEEecCcccC-------CCCCCEEECCCCchHHHHHHHHHHhCCCEEEEEeC
Confidence 666665443321 224667777776 899999982111 113332 2 789999999999999999999999
Q ss_pred CCccccCCC-cccccccccccchhchHHHHhcCCCCCcccCCcHHHHHHHHHHHHcCCcEEEeeCCCcc
Q 005047 198 VEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMD 265 (716)
Q Consensus 198 VdGVy~~dP-~~p~a~~i~~is~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a~~~gi~v~I~~g~~~~ 265 (716)
|||||++|| .+|++++|++|+++|+.++...|++ .-..++...+.++|||++|.|++.|+
T Consensus 227 VdGvyt~DP~~~~~A~~i~~is~~ea~~l~~~Gak--------v~h~~~~~~a~~~~Ipi~i~~~~~p~ 287 (294)
T cd04257 227 VDGVYSADPRKVKDARLLPSLSYQEAMELSYFGAK--------VLHPKTIQPVAKKNIPILIKNTFNPE 287 (294)
T ss_pred CCccCCCCCCCCCCCeEeceeCHHHHHHHHhCCCc--------ccCHHHHHHHHHCCCCEEEeeCCCCC
Confidence 999999999 5899999999999999987665532 22346677899999999999998875
No 201
>cd04259 AAK_AK-DapDC AAK_AK-DapDC: Amino Acid Kinase Superfamily (AAK), AK-DapDC; this CD includes the N-terminal catalytic aspartokinase (AK) domain of the bifunctional enzyme AK - DAP decarboxylase (DapDC) found in some bacteria. Aspartokinase is the first enzyme in the aspartate metabolic pathway, catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP. DapDC, which is the lysA gene product, catalyzes the decarboxylation of DAP to lysine.
Probab=99.87 E-value=4.6e-21 Score=201.06 Aligned_cols=229 Identities=17% Similarity=0.162 Sum_probs=162.9
Q ss_pred eEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhcccC-C----cccc-------
Q 005047 16 RLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNS-S----LADL------- 83 (716)
Q Consensus 16 ~iVIKiGGs~l~~~~~~~~~~~~~~~a~~I~~l~~~G~~vvIVhGGg~~i~~~~~~~~~~~~~-~----~~~~------- 83 (716)
++|.||||+++.+.. .++++++.|..-.+.+.++|+|+++.+.++..++........ . +..+
T Consensus 1 ~~V~KFGGtSv~~~~------~~~~v~~ii~~~~~~~~~~vVVVSA~~gvTd~L~~~~~~a~~~~~~~~l~~i~~~~~~~ 74 (295)
T cd04259 1 WVVLKFGGTSVSSRA------RWDTIAKLAQKHLNTGGQPLIVCSALSGISNKLEALIDQALLDEHHSLFNAIQSRHLNL 74 (295)
T ss_pred CEEEEeCccccCCHH------HHHHHHHHHHHHhhcCCCEEEEEeCCCCCchHHHHHHHHHhccChHHHHHHHHHHHHHH
Confidence 469999999998743 578888888755556778999999977777655332211000 0 0000
Q ss_pred -------------------ccc-------c--cchhHHHHHHhchHHHHHHHHHHhccCCCccce-----EEecCccCCc
Q 005047 84 -------------------QKP-------Q--NELDGKACAAVGQSSLMALYDTLFSQLDVTSSQ-----LLVTDSDFRD 130 (716)
Q Consensus 84 -------------------~~~-------~--~~l~~~~~~a~g~~~~~~~~~~~l~~~gi~~~~-----~~~~~~~~~~ 130 (716)
... . ..-..+.+.+.|+..+..++..+|...|+++.. +++++.+++.
T Consensus 75 ~~~L~~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~~~d~i~s~GE~lSa~lla~~L~~~Gi~a~~ld~~~~i~~~~~~~~ 154 (295)
T cd04259 75 AEQLEVDADALLANDLAQLQRWLTGISLLKQASPRTRAEVLALGELMSTRLGAAYLEAQGLKVKWLDARELLTATPTLGG 154 (295)
T ss_pred HHHhhhhhhhHHHHHHHHHHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEcHHHheeecccccc
Confidence 000 0 000124677899988888999999999988653 3445544431
Q ss_pred -------hhh-HhHHHHHHHHHHhC-CCeEEeeCCCceecCCCCCCCCCce--e--ecchHHHHHHHhhcCCCEEEEeec
Q 005047 131 -------EDF-RKQLYDTVQSLLDL-RVIPIFNENDAVSTRKAPYEDSSGI--F--WDNDSLAGLLALELKADLLVLLSD 197 (716)
Q Consensus 131 -------~~~-~~~~~~~i~~ll~~-g~iPV~~g~d~v~~~~~~~~~~g~~--~--~~sD~~A~~lA~~L~Ad~Li~~TD 197 (716)
... .....+.+.+.+.. +.|||+.|+-... ..|.. + +++|+.|+.+|.+|+|+.|+++||
T Consensus 155 ~~~~~~~a~v~~~~~~~~l~~~l~~~~~v~Vv~GFig~~-------~~G~~ttLGrggsD~tA~~lA~~l~A~~l~i~Td 227 (295)
T cd04259 155 ETMNYLSARCESEYADALLQKRLADGAQLIITQGFIARN-------AHGETVLLGRGGSDTSAAYFAAKLQAARCEIWTD 227 (295)
T ss_pred cccccccceehhhhhHHHHHHHHhcCCceeEeCCceeeC-------CCCCEEEECCCChHHHHHHHHHHcCCCEEEEEEC
Confidence 111 11123456666665 6799998832111 13332 3 899999999999999999999999
Q ss_pred CCccccCCC-cccccccccccchhchHHHHhcCCCCCcccCCcHHHHHHHHHHHHcCCcEEEeeCCCcc
Q 005047 198 VEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMD 265 (716)
Q Consensus 198 VdGVy~~dP-~~p~a~~i~~is~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a~~~gi~v~I~~g~~~~ 265 (716)
|||||++|| .+|++++|++|+++|+.++.. .|++..+.+++..+.++|||++|.|++.|+
T Consensus 228 V~Gvyt~DP~~~~~a~~i~~ls~~ea~~l~~--------~Ga~v~h~~a~~~a~~~~ipi~i~~~~~p~ 288 (295)
T cd04259 228 VPGLFTANPHEVPHARLLKRLDYDEAQEIAT--------MGAKVLHPRCIPPARRANIPMVVRSTERPE 288 (295)
T ss_pred CCccccCCCCCCCCCeEeceeCHHHHHHHHH--------cCCcccCHHHHHHHHHCCCCEEEEeCCCCC
Confidence 999999999 589999999999999998766 356788999999999999999999998875
No 202
>cd04243 AAK_AK-HSDH-like AAK_AK-HSDH-like: Amino Acid Kinase Superfamily (AAK), AK-HSDH-like; this family includes the N-terminal catalytic domain of aspartokinase (AK) of the bifunctional enzyme AK- homoserine dehydrogenase (HSDH). These aspartokinases are found in such bacteria as E. coli (AKI-HSDHI, ThrA and AKII-HSDHII, MetL) and in higher plants (Z. mays AK-HSDH). AK and HSDH are the first and third enzymes in the biosynthetic pathway of the aspartate family of amino acids. AK catalyzes the phosphorylation of Asp to P-aspartyl phosphate. HSDH catalyzes the NADPH-dependent conversion of Asp 3-semialdehyde to homoserine. ThrA and MetL are involved in threonine and methionine biosynthesis, respectively. In E. coli, ThrA is subject to allosteric regulation by the end product L-threonine and the native enzyme is reported to be tetrameric. As with bacteria, plant AK and HSDH are feedback inhibited by pathway end products. Maize AK-HSDH is a Thr-sensitive 180-kD enzyme. Arabidopsis AK-
Probab=99.87 E-value=3.7e-21 Score=201.75 Aligned_cols=227 Identities=20% Similarity=0.286 Sum_probs=160.9
Q ss_pred eEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhcccCC-------cccc-----
Q 005047 16 RLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSS-------LADL----- 83 (716)
Q Consensus 16 ~iVIKiGGs~l~~~~~~~~~~~~~~~a~~I~~l~~~G~~vvIVhGGg~~i~~~~~~~~~~~~~~-------~~~~----- 83 (716)
+.|+||||+++.+.. .+.++++.|..-. +.++++|+++.+.++..++......... +..+
T Consensus 1 m~V~KFGGtSv~~~~------~i~~v~~iI~~~~--~~~~vvVvSA~~gvTd~L~~~~~~a~~~~~~~~~~l~~i~~~h~ 72 (293)
T cd04243 1 MKVLKFGGTSVASAE------RIRRVADIIKSRA--SSPVLVVVSALGGVTNRLVALAELAASGDDAQAIVLQEIRERHL 72 (293)
T ss_pred CEEEEECccccCCHH------HHHHHHHHHHHhc--CCCEEEEEcCCCCcHHHHHHHHHHHhcCChhHHHHHHHHHHHHH
Confidence 479999999998743 5788887776443 6789999999777777654432211000 0000
Q ss_pred -----------------------cccc------------cchhHHHHHHhchHHHHHHHHHHhccCCCccce-----EEe
Q 005047 84 -----------------------QKPQ------------NELDGKACAAVGQSSLMALYDTLFSQLDVTSSQ-----LLV 123 (716)
Q Consensus 84 -----------------------~~~~------------~~l~~~~~~a~g~~~~~~~~~~~l~~~gi~~~~-----~~~ 123 (716)
.... ..-..+.+.++|+..+..++...|...|+++.. ++.
T Consensus 73 ~~~~~L~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~~s~~~~d~ils~GE~lSa~lla~~L~~~Gi~a~~ld~~~~i~ 152 (293)
T cd04243 73 DLIKELLSGESAAELLAALDSLLERLKDLLEGIRLLGELSDKTRAEVLSFGELLSSRLMSAYLQEQGLPAAWLDARELLL 152 (293)
T ss_pred HHHHHhhcchhhHHHHHHHHHHHHHHHHHHHhhhhhccCCchhhhHheeHHHHHHHHHHHHHHHhCCCCcEEEcHHHeEE
Confidence 0000 001224667889988888999999999988653 345
Q ss_pred cCccCCchhhHhH-HHHHHHHHHhC-CCeEEeeCCCceecCCCCCCCCCce--e--ecchHHHHHHHhhcCCCEEEEeec
Q 005047 124 TDSDFRDEDFRKQ-LYDTVQSLLDL-RVIPIFNENDAVSTRKAPYEDSSGI--F--WDNDSLAGLLALELKADLLVLLSD 197 (716)
Q Consensus 124 ~~~~~~~~~~~~~-~~~~i~~ll~~-g~iPV~~g~d~v~~~~~~~~~~g~~--~--~~sD~~A~~lA~~L~Ad~Li~~TD 197 (716)
+++++........ ..+.++.+++. +.|||+.|.-+. ...|.. + +++|+.|+.+|..|+|++|+++||
T Consensus 153 t~~~~~~~~~~~~~s~~~~~~~~~~~~~v~Vv~Gfig~-------~~~G~~ttLGRggsD~~A~~~a~~l~a~~~~i~td 225 (293)
T cd04243 153 TDDGFLNAVVDLKLSKERLAQLLAEHGKVVVTQGFIAS-------NEDGETTTLGRGGSDYSAALLAALLDAEEVEIWTD 225 (293)
T ss_pred ecCCCCcchhhhHHHHHHHHHHHhcCCCEEEecCcccc-------CCCCCEEEeCCCCcHHHHHHHHHHcCCCEEEEEeC
Confidence 5555544332211 14578888887 899999982111 113333 2 678999999999999999999999
Q ss_pred CCccccCCC-cccccccccccchhchHHHHhcCCCCCcccCCcHHHHHHHHHHHHcCCcEEEeeCCCcc
Q 005047 198 VEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMD 265 (716)
Q Consensus 198 VdGVy~~dP-~~p~a~~i~~is~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a~~~gi~v~I~~g~~~~ 265 (716)
|||||++|| .+|++++|++|+++|+.++...|++ .-..++...+.+++||++|.|++.|+
T Consensus 226 vdGiyt~dP~~~~~a~~i~~ls~~ea~~l~~~Gak--------vl~p~ai~~a~~~~i~i~i~~~~~p~ 286 (293)
T cd04243 226 VDGVYTADPRKVPDARLLKELSYDEAMELAYFGAK--------VLHPRTIQPAIRKNIPIFIKNTFNPE 286 (293)
T ss_pred CCccCCCCCCCCCCCeEeceeCHHHHHHHHhCCCc--------ccCHHHHHHHHHCCCcEEEecCCCCC
Confidence 999999999 5899999999999999988776533 22446778899999999999998875
No 203
>PRK06291 aspartate kinase; Provisional
Probab=99.86 E-value=1e-20 Score=212.23 Aligned_cols=238 Identities=23% Similarity=0.316 Sum_probs=174.4
Q ss_pred eEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhcccC--C---cc---------
Q 005047 16 RLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNS--S---LA--------- 81 (716)
Q Consensus 16 ~iVIKiGGs~l~~~~~~~~~~~~~~~a~~I~~l~~~G~~vvIVhGGg~~i~~~~~~~~~~~~~--~---~~--------- 81 (716)
++|.||||+++.+.+ .++++++.|....+.|.++|+|+++.+.++..++........ . +.
T Consensus 2 ~~V~KFGGtSv~~~~------~~~~v~~ii~~~~~~~~~~vvVvSA~~~~Td~L~~~~~~~~~~~~~~~~~~~~~~i~~~ 75 (465)
T PRK06291 2 RLVMKFGGTSVGDGE------RIRHVAKLVKRYRSEGNEVVVVVSAMTGVTDALLEIAEQALDVRDIAKVKDFIADLRER 75 (465)
T ss_pred cEEEEeCcccCCCHH------HHHHHHHHHHHHHhcCCCEEEEEcCCCCCHHHHHHHHHHHHhccchhhHHHHHHHHHHH
Confidence 479999999998743 688899888876667889999999987777765443211100 0 00
Q ss_pred --c----c-c--------------------cc--------c-cchhHHHHHHhchHHHHHHHHHHhccCCCccceE----
Q 005047 82 --D----L-Q--------------------KP--------Q-NELDGKACAAVGQSSLMALYDTLFSQLDVTSSQL---- 121 (716)
Q Consensus 82 --~----~-~--------------------~~--------~-~~l~~~~~~a~g~~~~~~~~~~~l~~~gi~~~~~---- 121 (716)
+ + . .. . ..-..+.+.+.|+..+..++...|...|+++..+
T Consensus 76 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~i~s~GE~~Sa~l~~~~L~~~Gi~a~~l~~~~ 155 (465)
T PRK06291 76 HYKAIEEAIKDPDIREEVSKTIDSRIEELEKALVGVSYLGELTPRSRDYILSFGERLSAPILSGALRDLGIKSVALTGGE 155 (465)
T ss_pred HHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHHHHHhccCChHHHHHHHhhhHHHHHHHHHHHHHhCCCCeEEEchHH
Confidence 0 0 0 00 0 0001246778899888888999999999886533
Q ss_pred --EecCccCCchhh----HhHHHHHHHHHHhCCCeEEeeCCCceecCCCCCCCCCcee----ecchHHHHHHHhhcCCCE
Q 005047 122 --LVTDSDFRDEDF----RKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIF----WDNDSLAGLLALELKADL 191 (716)
Q Consensus 122 --~~~~~~~~~~~~----~~~~~~~i~~ll~~g~iPV~~g~d~v~~~~~~~~~~g~~~----~~sD~~A~~lA~~L~Ad~ 191 (716)
+++.+++...+. +....+.+..+++.|.|||+.|+-+ ....|... +++|++|+++|.+|+|++
T Consensus 156 ~~i~t~~~~~~~~~~~~~~~~~~~~~~~ll~~~~vpVv~Gfig-------~~~~g~~~tlgrggsD~~A~~~A~~l~a~~ 228 (465)
T PRK06291 156 AGIITDSNFGNARPLPKTYERVKERLEPLLKEGVIPVVTGFIG-------ETEEGIITTLGRGGSDYSAAIIGAALDADE 228 (465)
T ss_pred CcEEecCCCCceeechhhHHHHHHHHHHHhhcCcEEEEeCcEE-------cCCCCCEEEecCCChHHHHHHHHHhcCCCE
Confidence 445555544332 2333457888899999999987211 11133332 599999999999999999
Q ss_pred EEEeecCCccccCCC-cccccccccccchhchHHHHhcCCCCCcccCCcHHHHHHHHHHHHcCCcEEEeeCCCcchHHHH
Q 005047 192 LVLLSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKV 270 (716)
Q Consensus 192 Li~~TDVdGVy~~dP-~~p~a~~i~~is~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a~~~gi~v~I~~g~~~~~l~~~ 270 (716)
|+++|||||||++|| .+|++++|++|+++|+.++... |.+..|.+++..+.++|||++|.|++.|+
T Consensus 229 ~~i~tdV~Gi~~~dP~~~~~a~~i~~l~~~ea~~l~~~--------G~~v~~~~a~~~~~~~~i~i~i~~~~~~~----- 295 (465)
T PRK06291 229 IWIWTDVDGVMTTDPRIVPEARVIPKISYIEAMELSYF--------GAKVLHPRTIEPAMEKGIPVRVKNTFNPE----- 295 (465)
T ss_pred EEEEECCCCCCCCCCCCCCCCeEccccCHHHHHHHHhC--------CCcccCHHHHHHHHHcCCcEEEecCCCCC-----
Confidence 999999999999999 5899999999999999987553 56788999999999999999999998874
Q ss_pred hcCCcceeEEecC
Q 005047 271 LEGKRVGTLFHRD 283 (716)
Q Consensus 271 ~tg~~iGT~i~~~ 283 (716)
..||++...
T Consensus 296 ----~~gt~i~~~ 304 (465)
T PRK06291 296 ----FPGTLITSD 304 (465)
T ss_pred ----CCceEEEec
Confidence 468988754
No 204
>PRK09084 aspartate kinase III; Validated
Probab=99.85 E-value=2.2e-20 Score=207.95 Aligned_cols=234 Identities=20% Similarity=0.202 Sum_probs=169.2
Q ss_pred eEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhcccCC--c----cc-------
Q 005047 16 RLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSS--L----AD------- 82 (716)
Q Consensus 16 ~iVIKiGGs~l~~~~~~~~~~~~~~~a~~I~~l~~~G~~vvIVhGGg~~i~~~~~~~~~~~~~~--~----~~------- 82 (716)
|+|.||||+++.+.+ +++++++.|+. .+.++++|+++.+.++..++......... . ..
T Consensus 1 m~V~KFGGtSv~~~e------~i~~v~~ii~~---~~~~~vvVVSA~~~~Td~L~~~~~~~~~~~~~~~~~~~i~~~h~~ 71 (448)
T PRK09084 1 LVVAKFGGTSVADFD------AMNRSADIVLS---NPNTRLVVLSASAGVTNLLVALAEGAEPGDERLALLDEIRQIQYA 71 (448)
T ss_pred CEEEEECccCcCCHH------HHHHHHHHHhc---CCCCEEEEEcCCCCchHHHHHHHHHHHcCccHHHHHHHHHHHHHH
Confidence 579999999998743 57888887764 57789999999888887664432211100 0 00
Q ss_pred ----c-----------------ccc-------ccchhHHHHHHhchHHHHHHHHHHhccCCCcc-----ceEEecCccCC
Q 005047 83 ----L-----------------QKP-------QNELDGKACAAVGQSSLMALYDTLFSQLDVTS-----SQLLVTDSDFR 129 (716)
Q Consensus 83 ----~-----------------~~~-------~~~l~~~~~~a~g~~~~~~~~~~~l~~~gi~~-----~~~~~~~~~~~ 129 (716)
+ +.. ......+.+.+.|+..+..++...|...|+++ .++++++++|.
T Consensus 72 ~~~~l~~~~~~~~~i~~~~~~l~~l~~~~~~~~~~~~~d~i~s~GE~lSa~l~~~~L~~~Gi~a~~l~~~~~i~t~~~~~ 151 (448)
T PRK09084 72 ILDRLGDPNVVREEIERLLENITVLAEAASLATSPALTDELVSHGELMSTLLFVELLRERGVQAEWFDVRKVMRTDDRFG 151 (448)
T ss_pred HHHHhccchHHHHHHHHHHHHHHHHHHhhhhcCChhhhhhhhhHHHHHHHHHHHHHHHhCCCCcEEEchHHeEEecCCCC
Confidence 0 000 00012357789999888889999999999884 45667777776
Q ss_pred chhhH-----hHHHHHHHHHHhCCCeEEeeCCCceecCCCCCCCCCce--e--ecchHHHHHHHhhcCCCEEEEeecCCc
Q 005047 130 DEDFR-----KQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGI--F--WDNDSLAGLLALELKADLLVLLSDVEG 200 (716)
Q Consensus 130 ~~~~~-----~~~~~~i~~ll~~g~iPV~~g~d~v~~~~~~~~~~g~~--~--~~sD~~A~~lA~~L~Ad~Li~~TDVdG 200 (716)
+..+. ....+.+..+++.+ +||+.|+-+... .|.. + ++||+.|+.+|..|+|+.++++|||||
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~-v~Vv~Gf~g~~~-------~G~~ttLgRggSD~~a~~~a~~l~a~~~~i~tdv~G 223 (448)
T PRK09084 152 RAEPDVAALAELAQEQLLPLLAEG-VVVTQGFIGSDE-------KGRTTTLGRGGSDYSAALLAEALNASRVEIWTDVPG 223 (448)
T ss_pred cccccHHHHHHHHHHHHHHhhcCC-cEEecCeeecCC-------CCCEeecCCCchHHHHHHHHHHcCCCEEEEEECCCc
Confidence 54331 12235677778888 999998322211 3332 3 799999999999999999999999999
Q ss_pred cccCCC-cccccccccccchhchHHHHhcCCCCCcccCCcHHHHHHHHHHHHcCCcEEEeeCCCcchHHHHhcCCcceeE
Q 005047 201 LYSGPP-SEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTL 279 (716)
Q Consensus 201 Vy~~dP-~~p~a~~i~~is~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a~~~gi~v~I~~g~~~~~l~~~~tg~~iGT~ 279 (716)
||++|| .+|++++|++|+++|+.++...|++ .-+..+...+.++++|++|.|++.|+ ..||+
T Consensus 224 i~t~dP~~~~~a~~i~~is~~ea~ela~~Ga~--------vlh~~~~~~~~~~~i~i~i~~~~~~~---------~~GT~ 286 (448)
T PRK09084 224 IYTTDPRIVPAAKRIDEISFEEAAEMATFGAK--------VLHPATLLPAVRSNIPVFVGSSKDPE---------AGGTW 286 (448)
T ss_pred cccCCCCCCCCCeEcccCCHHHHHHHHhCCCc--------ccCHHHHHHHHHcCCcEEEEeCCCCC---------CCceE
Confidence 999999 5899999999999999998776543 22446777899999999999998875 35888
Q ss_pred EecC
Q 005047 280 FHRD 283 (716)
Q Consensus 280 i~~~ 283 (716)
+...
T Consensus 287 I~~~ 290 (448)
T PRK09084 287 ICND 290 (448)
T ss_pred EecC
Confidence 8654
No 205
>cd04258 AAK_AKiii-LysC-EC AAK_AKiii-LysC-EC: Amino Acid Kinase Superfamily (AAK), AKiii-LysC-EC: this CD includes the N-terminal catalytic aspartokinase (AK) domain of the lysine-sensitive aspartokinase isoenzyme AKIII. AKIII is a monofunctional class enzyme (LysC) found in some bacteria such as E. coli. Aspartokinase is the first enzyme in the aspartate metabolic pathway and catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP. In E. coli, LysC is reported to be a homodimer of 50 kD subunits.
Probab=99.84 E-value=9.4e-20 Score=190.47 Aligned_cols=225 Identities=20% Similarity=0.208 Sum_probs=157.0
Q ss_pred eEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhcccC----Cc----ccc----
Q 005047 16 RLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNS----SL----ADL---- 83 (716)
Q Consensus 16 ~iVIKiGGs~l~~~~~~~~~~~~~~~a~~I~~l~~~G~~vvIVhGGg~~i~~~~~~~~~~~~~----~~----~~~---- 83 (716)
+.|+||||+++.+.+ .+.++++.|.. .+.++|+|+++.+.++..++........ .. ..+
T Consensus 1 m~V~KFGGtSv~~~~------~i~~v~~ii~~---~~~~~vVVVSA~~~vTd~L~~~~~~~~~~~~~~~~~~l~~l~~~h 71 (292)
T cd04258 1 MVVAKFGGTSVADYA------AMLRCAAIVKS---DASVRLVVVSASAGVTNLLVALADAAESGEEIESIPQLHEIRAIH 71 (292)
T ss_pred CEEEEECccccCCHH------HHHHHHHHHhc---cCCCEEEEEeCCCCchHHHHHHHHHHhcCCcchhhHHHHHHHHHH
Confidence 479999999998743 57777777653 3668999999977777665433211100 00 000
Q ss_pred ------------------------cccc------cc---hhHHHHHHhchHHHHHHHHHHhccCCCccc-----eEEecC
Q 005047 84 ------------------------QKPQ------NE---LDGKACAAVGQSSLMALYDTLFSQLDVTSS-----QLLVTD 125 (716)
Q Consensus 84 ------------------------~~~~------~~---l~~~~~~a~g~~~~~~~~~~~l~~~gi~~~-----~~~~~~ 125 (716)
.... .. -..+.+.+.|+..+..++...|+..|+++. ++++++
T Consensus 72 ~~~~~~L~~~~~~~~~i~~~~~~l~~~~~~~~~~~~~~~~~~d~i~s~GE~lSa~lla~~L~~~Gi~a~~ld~~~~i~t~ 151 (292)
T cd04258 72 FAILNRLGAPEELRAKLEELLEELTQLAEGAALLGELSPASRDELLSFGERMSSLLFSEALREQGVPAEWFDVRTVLRTD 151 (292)
T ss_pred HHHHHHhhcchhHHHHHHHHHHHHHHHHhhhccccccChHhHhHhhhHHHHHHHHHHHHHHHhCCCCeEEEchHHeEEec
Confidence 0000 00 022567788998888889999999998764 345666
Q ss_pred ccCCchhhHh-----HHHHHHHHHHhCCCeEEeeCCCceecCCCCCCCCCce--e--ecchHHHHHHHhhcCCCEEEEee
Q 005047 126 SDFRDEDFRK-----QLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGI--F--WDNDSLAGLLALELKADLLVLLS 196 (716)
Q Consensus 126 ~~~~~~~~~~-----~~~~~i~~ll~~g~iPV~~g~d~v~~~~~~~~~~g~~--~--~~sD~~A~~lA~~L~Ad~Li~~T 196 (716)
+++....+.. .....++. +..+.|||+.|+-+.. ..|.. + +++|+.|+.+|..|+|+.++++|
T Consensus 152 ~~~~~a~~~~~~~~~~~~~~~~~-~~~~~v~Vv~Gf~g~~-------~~G~~ttLGrggsD~~a~~~a~~l~a~~~~i~t 223 (292)
T cd04258 152 SRFGRAAPDLNALAELAAKLLKP-LLAGTVVVTQGFIGST-------EKGRTTTLGRGGSDYSAALLAEALHAEELQIWT 223 (292)
T ss_pred CCCccccccHHHHHHHHHHHHHH-hhcCCEEEECCccccC-------CCCCEEecCCCchHHHHHHHHHHcCCCEEEEEE
Confidence 6665543211 11233333 3566899999821111 13332 2 88999999999999999999999
Q ss_pred cCCccccCCC-cccccccccccchhchHHHHhcCCCCCcccCCcHHHHHHHHHHHHcCCcEEEeeCCCcc
Q 005047 197 DVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMD 265 (716)
Q Consensus 197 DVdGVy~~dP-~~p~a~~i~~is~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a~~~gi~v~I~~g~~~~ 265 (716)
||||||++|| .+|++++|++|+++|+.++...|++ -+ ..++...+.+++||++|.|.+.|+
T Consensus 224 dv~Gv~~~dP~~~~~a~~i~~isy~Ea~ela~~Gak------vl--hp~a~~~~~~~~ipi~i~~~~~p~ 285 (292)
T cd04258 224 DVAGIYTTDPRICPAARAIKEISFAEAAEMATFGAK------VL--HPATLLPAIRKNIPVFVGSSKDPE 285 (292)
T ss_pred CCCccCCCCCCCCCCCeEeceeCHHHHHHHHHCCCc------cc--CHHHHHHHHHcCCcEEEEeCCCCC
Confidence 9999999999 5899999999999999998776643 22 457888899999999999988775
No 206
>PRK05925 aspartate kinase; Provisional
Probab=99.83 E-value=1.2e-19 Score=200.39 Aligned_cols=236 Identities=21% Similarity=0.203 Sum_probs=164.6
Q ss_pred cCeEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhcccC----Cccc-------
Q 005047 14 VKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNS----SLAD------- 82 (716)
Q Consensus 14 ~~~iVIKiGGs~l~~~~~~~~~~~~~~~a~~I~~l~~~G~~vvIVhGGg~~i~~~~~~~~~~~~~----~~~~------- 82 (716)
+.++|.||||+++.+.+ .+.++++.|.. ..++++|+++.+.++..+......... .+.+
T Consensus 1 ~~~~V~KFGGtSv~~~e------~i~~v~~ii~~----~~~~vVVvSA~~~~Td~L~~~~~~a~~~~~~~~~~i~~~~~~ 70 (440)
T PRK05925 1 MAPLVYKFGGTSLGTAE------SIRRVCDIICK----EKPSFVVVSAVAGVTDLLEEFCRLSKGKREALTEKIREKHEE 70 (440)
T ss_pred CCcEEEEECccccCCHH------HHHHHHHHHhc----CCCEEEEECCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence 35789999999998743 57777777753 246889999987777765432211000 0000
Q ss_pred ----c------cc------------cccchhHHHHHHhchHHHHHHHHHHhccCCCccc-----eEEecCccCCchhh--
Q 005047 83 ----L------QK------------PQNELDGKACAAVGQSSLMALYDTLFSQLDVTSS-----QLLVTDSDFRDEDF-- 133 (716)
Q Consensus 83 ----~------~~------------~~~~l~~~~~~a~g~~~~~~~~~~~l~~~gi~~~-----~~~~~~~~~~~~~~-- 133 (716)
+ .. .......+.+.+.|+..+..++..+|+..|+++. ++++++++|.+..+
T Consensus 71 ~~~~l~~~~~~~~~~~~L~~~~~~~~~~~~~~d~i~s~GE~~Sa~l~a~~L~~~Gi~a~~ld~~~~i~t~~~~~~a~~~~ 150 (440)
T PRK05925 71 IAKELGIEFSLSPWWERLEHFEDVEEISSEDQARILAIGEDISASLICAYCCTYVLPLEFLEARQVILTDDQYLRAVPDL 150 (440)
T ss_pred HHHHhhcchhhhHHHHHHHHHHHhCcCCchhhhhheehhHHHHHHHHHHHHHhCCCCeEEEcHHHhEeecCCccccccCH
Confidence 0 00 0001122567789998888889999999998653 45667766664333
Q ss_pred HhHHHHHHHHHHhCCCeEEeeCCCceecCCCCCCCCCce--e--ecchHHHHHHHhhcCCCEEEEeecCCccccCCC-cc
Q 005047 134 RKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGI--F--WDNDSLAGLLALELKADLLVLLSDVEGLYSGPP-SE 208 (716)
Q Consensus 134 ~~~~~~~i~~ll~~g~iPV~~g~d~v~~~~~~~~~~g~~--~--~~sD~~A~~lA~~L~Ad~Li~~TDVdGVy~~dP-~~ 208 (716)
...........++.+.|||+.|+-+.. ..|.. + +++|+.|+++|..|+||.++++|||||||++|| .+
T Consensus 151 ~~~~~~~~~~~~~~~~v~Vv~GF~g~~-------~~G~~ttLgrGgsD~~AallA~~l~Ad~~~i~TdVdGvytaDP~~~ 223 (440)
T PRK05925 151 ALMQTAWHELALQEDAIYIMQGFIGAN-------SSGKTTVLGRGGSDFSASLIAELCKAREVRIYTDVNGIYTMDPKII 223 (440)
T ss_pred HHHHHHHHHhhccCCcEEEecCcceeC-------CCCCEEEeccCcHHHHHHHHHHHcCCCEEEEEEcCCccCCCCcCCC
Confidence 112223333345677899999832111 23332 2 999999999999999999999999999999999 58
Q ss_pred cccccccccchhchHHHHhcCCCCCcccCCcHHHHHHHHHHHHcCCcEEEeeCCCcchHHHHhcCCcceeEEecC
Q 005047 209 PNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRD 283 (716)
Q Consensus 209 p~a~~i~~is~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a~~~gi~v~I~~g~~~~~l~~~~tg~~iGT~i~~~ 283 (716)
|++++|++|+++|+.++...|++ ...++| ...|.++|||++|.|++.|+ ..||++...
T Consensus 224 ~~A~~i~~is~~ea~ela~~Ga~--vl~~~~------~~~a~~~~Ipi~I~~~~~p~---------~~GT~i~~~ 281 (440)
T PRK05925 224 KDAQLIPELSFEEMQNLASFGAK--VLHPPM------LKPCVRAGIPIFVTSTFDVT---------KGGTWIYAS 281 (440)
T ss_pred CCCeEeeEECHHHHHHHHhCCCC--cCCHHH------HHHHHHCCCcEEEecCCCCC---------CCccEEecC
Confidence 99999999999999987666543 444544 47889999999999999886 368888754
No 207
>cd04247 AAK_AK-Hom3 AAK_AK-Hom3: Amino Acid Kinase Superfamily (AAK), AK-Hom3; this CD includes the N-terminal catalytic domain of the aspartokinase HOM3, a monofunctional class enzyme found in Saccharomyces cerevisiae and other related AK domains. Aspartokinase, the first enzyme in the aspartate metabolic pathway, catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP, and in fungi, is responsible for the production of threonine, isoleucine and methionine. S. cerevisiae has a single aspartokinase isoenzyme type, which is regulated by feedback, allosteric inhibition by L-threonine. Recent studies show that the allosteric transition triggered by binding of threonine to AK involves a large change in the conformation of the native hexameric enzyme that is converted to an inactive one of different shape and substantially smaller hydrodynamic size.
Probab=99.82 E-value=2.8e-19 Score=187.70 Aligned_cols=165 Identities=16% Similarity=0.170 Sum_probs=120.3
Q ss_pred HHHHHhchHHHHHHHHHHhccCCCccceE-----EecCccC--CchhhHh-HHHHHHHHHHh-CCCeEEeeCCCceecCC
Q 005047 93 KACAAVGQSSLMALYDTLFSQLDVTSSQL-----LVTDSDF--RDEDFRK-QLYDTVQSLLD-LRVIPIFNENDAVSTRK 163 (716)
Q Consensus 93 ~~~~a~g~~~~~~~~~~~l~~~gi~~~~~-----~~~~~~~--~~~~~~~-~~~~~i~~ll~-~g~iPV~~g~d~v~~~~ 163 (716)
+.+.+.|+..+..++...|++.|+++..+ +.++.+. .....+. ........+.+ .+.|||+.|+-
T Consensus 126 d~i~s~GE~lSa~l~a~~L~~~Gi~a~~ld~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Vv~GFi------ 199 (306)
T cd04247 126 DLVISTGEKLSCRFMAAVLRDRGVDAEYVDLSHIVDLDFSIEALDQTFYDELAQVLGEKITACENRVPVVTGFF------ 199 (306)
T ss_pred HHHhhHHHHHHHHHHHHHHHhCCCCeEEEcHHHheecCCCccccccchhHHHHHHHHHHhhccCCceEEeeccE------
Confidence 46778999888889999999999886533 2232211 1111111 11122223332 57799999821
Q ss_pred CCCCC-CCce--e--ecchHHHHHHHhhcCCCEEEEeecCCccccCCC-cccccccccccchhchHHHHhcCCCCCcccC
Q 005047 164 APYED-SSGI--F--WDNDSLAGLLALELKADLLVLLSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGDKSRVGRG 237 (716)
Q Consensus 164 ~~~~~-~g~~--~--~~sD~~A~~lA~~L~Ad~Li~~TDVdGVy~~dP-~~p~a~~i~~is~~e~~~~~~~g~~~~~~~g 237 (716)
+++ .|.. + +++|+.|+++|..|+|++++++|||||||++|| .+|+++.|++|+++|+.++...|++
T Consensus 200 --g~~~~G~~ttLGRgGsD~~A~~la~~l~a~~v~i~tdVdGvyt~DP~~~~~a~~i~~is~~ea~el~~~Gak------ 271 (306)
T cd04247 200 --GNVPGGLLSQIGRGYTDLCAALCAVGLNADELQIWKEVDGIFTADPRKVPTARLLPSITPEEAAELTYYGSE------ 271 (306)
T ss_pred --ecCCCCCeEEeCCCchHHHHHHHHHHcCCCEEEEeecCCeeECCCCCCCCCCeEecccCHHHHHHHHhCcCc------
Confidence 221 2332 3 899999999999999999999999999999999 5899999999999999998776643
Q ss_pred CcHHHHHHHHHHHHcCCcEEEeeCCCcchHHHHhcCCcceeEEec
Q 005047 238 GMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHR 282 (716)
Q Consensus 238 gM~~Kl~aa~~a~~~gi~v~I~~g~~~~~l~~~~tg~~iGT~i~~ 282 (716)
.-+.++...|.+++||++|.|.+.|+ ..||+|.+
T Consensus 272 --VlHp~ti~pa~~~~Ipi~i~nt~~P~---------~~GT~I~~ 305 (306)
T cd04247 272 --VIHPFTMEQVIKARIPIRIKNVENPR---------GEGTVIYP 305 (306)
T ss_pred --ccCHHHHHHHHHcCCcEEEecCCCCC---------CCCcEEcC
Confidence 33557888999999999999988775 45888754
No 208
>PRK09034 aspartate kinase; Reviewed
Probab=99.82 E-value=3.3e-19 Score=199.06 Aligned_cols=235 Identities=21% Similarity=0.211 Sum_probs=165.3
Q ss_pred eEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCChhH-------hhHHHhhhhhcccCC--cc----c
Q 005047 16 RLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVG-------VGRQRLRYRKLVNSS--LA----D 82 (716)
Q Consensus 16 ~iVIKiGGs~l~~~~~~~~~~~~~~~a~~I~~l~~~G~~vvIVhGGg~~-------i~~~~~~~~~~~~~~--~~----~ 82 (716)
|+|.||||+++.+.+ .+.++++.|. +.+.++|+|+++.+. ++..++......... +. .
T Consensus 1 m~V~KFGGtSv~~~~------~i~~v~~ii~---~~~~~~vvVVSA~~~~~~~~~~~Td~L~~~~~~~~~~~~~~~~~~~ 71 (454)
T PRK09034 1 MKVVKFGGSSLASAE------QFKKVLNIVK---SDPERKIVVVSAPGKRFKEDTKVTDLLILYAEAVLAGEDYEDIFEA 71 (454)
T ss_pred CEEEEeCccccCCHH------HHHHHHHHHh---ccCCCEEEEEcCCcCCCCCccChHHHHHHHHHHHhcCCcHHHHHHH
Confidence 469999999998743 5777777665 245688999998643 666543322111000 00 0
Q ss_pred cc-------------------------cc----c--cchhHHHHHHhchHHHHHHHHHHhccCCCccce-----E-EecC
Q 005047 83 LQ-------------------------KP----Q--NELDGKACAAVGQSSLMALYDTLFSQLDVTSSQ-----L-LVTD 125 (716)
Q Consensus 83 ~~-------------------------~~----~--~~l~~~~~~a~g~~~~~~~~~~~l~~~gi~~~~-----~-~~~~ 125 (716)
+. .. . .....+.+.+.|+..+..++...|...|+++.. + ++++
T Consensus 72 ~~~~~~~~~~~L~~~~~~~~~~~~~l~~l~~~~~~~~~~~~d~l~s~GE~~S~~l~a~~L~~~g~~a~~~~~~~~~~~t~ 151 (454)
T PRK09034 72 IIARYAEIAKELGLDADILEKIEEILEHLANLASRNPDRLLDAFKARGEDLNAKLIAAYLNYEGIPARYVDPKEAGIIVT 151 (454)
T ss_pred HHHHHHHHHHHhccchHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcEEEchHHceEEec
Confidence 00 00 0 001125778999988888899999999987653 3 4566
Q ss_pred ccCCchhhHhHHHHHHHHHHhCCCeEEeeCCCceecCCCCCCCCCce--e--ecchHHHHHHHhhcCCCEEEEeecCCcc
Q 005047 126 SDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGI--F--WDNDSLAGLLALELKADLLVLLSDVEGL 201 (716)
Q Consensus 126 ~~~~~~~~~~~~~~~i~~ll~~g~iPV~~g~d~v~~~~~~~~~~g~~--~--~~sD~~A~~lA~~L~Ad~Li~~TDVdGV 201 (716)
+++.+........+.+..++..+.|||+.|.-+. ...|.. + ++||+.|+++|.+|+|+.+.++||||||
T Consensus 152 ~~~~~a~i~~~~~~~~~~~~~~~~v~Vv~GFig~-------~~~g~~ttlgRggSD~tA~~la~~l~A~~~~i~tdV~Gi 224 (454)
T PRK09034 152 DEPGNAQVLPESYDNLKKLRDRDEKLVIPGFFGV-------TKDGQIVTFSRGGSDITGAILARGVKADLYENFTDVDGI 224 (454)
T ss_pred CCcCceeEcHhhHHHHHHHHhcCCEEEecCcccc-------CCCCCEEecCCCcHHHHHHHHHHHcCCCEEEEEecCCcc
Confidence 6666543333334566666777889999982111 113332 3 8999999999999999999999999999
Q ss_pred ccCCCc-ccccccccccchhchHHHHhcCCCCCcccCCcHHHHHHHHHHHHcCCcEEEeeCCCcchHHHHhcCCcceeEE
Q 005047 202 YSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLF 280 (716)
Q Consensus 202 y~~dP~-~p~a~~i~~is~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a~~~gi~v~I~~g~~~~~l~~~~tg~~iGT~i 280 (716)
|++||+ .|+++.+++||++|+.++...|++ -|. .++...|.+++||++|.|.+.|+ ..||++
T Consensus 225 ~taDPr~v~~A~~l~~lsy~Ea~ela~~Gak------vlh--p~ai~~a~~~~Ipi~v~~~~~p~---------~~GT~I 287 (454)
T PRK09034 225 YAANPRIVKNPKSIKEITYREMRELSYAGFS------VFH--DEALIPAYRGGIPINIKNTNNPE---------DPGTLI 287 (454)
T ss_pred CcCCCCCCCCCeECCccCHHHHHHHHhCCcc------cCC--HHHHHHHHHcCCCEEEEcCCCCC---------CCccEE
Confidence 999995 899999999999999998776643 343 46888899999999999988764 358888
Q ss_pred ecC
Q 005047 281 HRD 283 (716)
Q Consensus 281 ~~~ 283 (716)
...
T Consensus 288 ~~~ 290 (454)
T PRK09034 288 VPD 290 (454)
T ss_pred Eec
Confidence 754
No 209
>PLN02551 aspartokinase
Probab=99.81 E-value=6.3e-19 Score=198.08 Aligned_cols=236 Identities=17% Similarity=0.247 Sum_probs=166.3
Q ss_pred CeEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhcc-----c-----CCccc--
Q 005047 15 KRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLV-----N-----SSLAD-- 82 (716)
Q Consensus 15 ~~iVIKiGGs~l~~~~~~~~~~~~~~~a~~I~~l~~~G~~vvIVhGGg~~i~~~~~~~~~~~-----~-----~~~~~-- 82 (716)
.++|.||||+++.+.+ .+.++++.|.... ..++|+|+++.+.++..++...... . ..+..
T Consensus 52 ~~~V~KFGGtSv~~~e------~i~~v~~iI~~~~--~~~~vVVvSA~~~~Td~L~~~~~~a~~~~~~~~~~~~~l~~i~ 123 (521)
T PLN02551 52 LTVVMKFGGSSVASAE------RMREVADLILSFP--DERPVVVLSAMGKTTNNLLLAGEKAVSCGVTNVSEIEELSAIR 123 (521)
T ss_pred ceEEEEECCCccCCHH------HHHHHHHHHHhcC--CCCEEEEEcCCCCchHHHHHHHHHHhhccccchhhHHHHHHHH
Confidence 4569999999998743 5788888877532 3468899998776776654321100 0 00000
Q ss_pred -----------------------cc-------ccc--cchhHHHHHHhchHHHHHHHHHHhccCCCccce-----E-Eec
Q 005047 83 -----------------------LQ-------KPQ--NELDGKACAAVGQSSLMALYDTLFSQLDVTSSQ-----L-LVT 124 (716)
Q Consensus 83 -----------------------~~-------~~~--~~l~~~~~~a~g~~~~~~~~~~~l~~~gi~~~~-----~-~~~ 124 (716)
+. ... ..-..+.+.++|+..+..++..+|...|+++.. + +++
T Consensus 124 ~~h~~~~~~L~~~~~~~~~~~~~l~~ll~~i~~~~~~~~~~~d~ils~GE~lSa~lla~~L~~~Gi~a~~lda~~~gi~t 203 (521)
T PLN02551 124 ELHLRTADELGVDESVVEKLLDELEQLLKGIAMMKELTPRTRDYLVSFGERMSTRIFAAYLNKIGVKARQYDAFDIGFIT 203 (521)
T ss_pred HHHHHHHHHhhcchHHHHHHHHHHHHHHHhhhhhcccchHHHHHHHhHHHHHHHHHHHHHHHHCCCCcEEechHHcceEe
Confidence 00 000 001225788999998888999999999988653 3 566
Q ss_pred CccCCchhhHhHHHHHHHHHH-----hCCCeEEeeCCCceecCCCCCCC--CCce--e--ecchHHHHHHHhhcCCCEEE
Q 005047 125 DSDFRDEDFRKQLYDTVQSLL-----DLRVIPIFNENDAVSTRKAPYED--SSGI--F--WDNDSLAGLLALELKADLLV 193 (716)
Q Consensus 125 ~~~~~~~~~~~~~~~~i~~ll-----~~g~iPV~~g~d~v~~~~~~~~~--~g~~--~--~~sD~~A~~lA~~L~Ad~Li 193 (716)
+++|.+........+.+.+.+ +.+.|||+.|+ .+.+ .|.. + ++||+.|+.+|.+|+|+.+.
T Consensus 204 ~~~~~~a~i~~~~~~~l~~~l~~~~~~~~~v~Vv~GF--------ig~~~~~G~~ttLGRGGSD~sA~~la~~L~A~~v~ 275 (521)
T PLN02551 204 TDDFTNADILEATYPAVAKRLHGDWIDDPAVPVVTGF--------LGKGWKTGAITTLGRGGSDLTATTIGKALGLREIQ 275 (521)
T ss_pred cCCCCccchhhhhHHHHHHHHHhhhccCCeEEEEcCc--------cccCCCCCcEEecCCChHHHHHHHHHHHcCCCEEE
Confidence 777765444322223333333 45689999982 2222 3333 3 89999999999999999999
Q ss_pred EeecCCccccCCCc-ccccccccccchhchHHHHhcCCCCCcccCCcHHHHHHHHHHHHcCCcEEEeeCCCcchHHHHhc
Q 005047 194 LLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLE 272 (716)
Q Consensus 194 ~~TDVdGVy~~dP~-~p~a~~i~~is~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a~~~gi~v~I~~g~~~~~l~~~~t 272 (716)
++|||||||++||+ .|+++.|++|||+|+.++..+|++ .-+.++...|.+++||++|.|.+.|+
T Consensus 276 I~tDV~Gi~taDPr~v~~A~~l~~lsy~Ea~elA~~Gak--------Vlhp~ai~pa~~~~Ipi~vknt~~p~------- 340 (521)
T PLN02551 276 VWKDVDGVLTCDPRIYPNAVPVPYLTFDEAAELAYFGAQ--------VLHPQSMRPAREGDIPVRVKNSYNPT------- 340 (521)
T ss_pred EEeCCCceeCCCCCCCCCceEecccCHHHHHHHHhCCCc--------ccCHHHHHHHHHCCceEEEEecCCCC-------
Confidence 99999999999995 999999999999999998887654 33457888999999999999987763
Q ss_pred CCcceeEEecC
Q 005047 273 GKRVGTLFHRD 283 (716)
Q Consensus 273 g~~iGT~i~~~ 283 (716)
..||+|...
T Consensus 341 --~~GT~I~~~ 349 (521)
T PLN02551 341 --APGTLITKT 349 (521)
T ss_pred --CCCcEEecc
Confidence 469998754
No 210
>PRK09466 metL bifunctional aspartate kinase II/homoserine dehydrogenase II; Provisional
Probab=99.78 E-value=3.2e-18 Score=201.48 Aligned_cols=237 Identities=16% Similarity=0.161 Sum_probs=165.4
Q ss_pred ccCeEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhcccCCc-------ccc--
Q 005047 13 DVKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSL-------ADL-- 83 (716)
Q Consensus 13 ~~~~iVIKiGGs~l~~~~~~~~~~~~~~~a~~I~~l~~~G~~vvIVhGGg~~i~~~~~~~~~~~~~~~-------~~~-- 83 (716)
.|+++|.||||+++.+.+ .++++++.|..-.+.+ +++|+++.+.++..++.......... ..+
T Consensus 9 ~M~~~V~KFGGtSv~~~e------~i~~v~~iI~~~~~~~--~vVVVSA~~~~Td~L~~~~~~~~~~~~~~~~~l~~i~~ 80 (810)
T PRK09466 9 AMGRQLHKFGGSSLADAK------CYRRVAGILAEYSQPD--DLVVVSAAGKTTNQLISWLKLSQTDRLSAHQVQQTLRR 80 (810)
T ss_pred cceeEEEEECccccCCHH------HHHHHHHHHhhhccCC--EEEEEcCCCCCHHHHHHHHHHhhcCchhHHHHHHHHHH
Confidence 356899999999998754 5888888776544433 78888887777776544322110000 000
Q ss_pred ------ccc-----c----------------------cchhHHHHHHhchHHHHHHHHHHhccCCCccceE-----EecC
Q 005047 84 ------QKP-----Q----------------------NELDGKACAAVGQSSLMALYDTLFSQLDVTSSQL-----LVTD 125 (716)
Q Consensus 84 ------~~~-----~----------------------~~l~~~~~~a~g~~~~~~~~~~~l~~~gi~~~~~-----~~~~ 125 (716)
..+ + .....+.+.+.|+..+..++..+|.+.|+++..+ +.++
T Consensus 81 ~h~~~~~~L~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~~d~ils~GE~~Sa~lla~~L~~~G~~a~~ld~~~~i~~~ 160 (810)
T PRK09466 81 YQQDLIEGLLPAEQARSLLSRLISDLERLAALLDGGINDAQYAEVVGHGEVWSARLMAALLNQQGLPAAWLDARSFLRAE 160 (810)
T ss_pred HHHHHHHHhhcchhhhHHHHHHHHHHHHHHHHhhccCCchhhhheecHHHHHHHHHHHHHHHhCCCCcEEEcHHHheecC
Confidence 000 0 0011246678899888889999999999886533 3333
Q ss_pred ccCCchhh-HhHHHHHHHHHHhCC--CeEEeeCCCceecCCCCCCCCCce--e--ecchHHHHHHHhhcCCCEEEEeecC
Q 005047 126 SDFRDEDF-RKQLYDTVQSLLDLR--VIPIFNENDAVSTRKAPYEDSSGI--F--WDNDSLAGLLALELKADLLVLLSDV 198 (716)
Q Consensus 126 ~~~~~~~~-~~~~~~~i~~ll~~g--~iPV~~g~d~v~~~~~~~~~~g~~--~--~~sD~~A~~lA~~L~Ad~Li~~TDV 198 (716)
..+ .... .....+.+++++..+ .+||+.|+-+.. ..|.. + ++||+.|+.+|.+|+|+.+.++|||
T Consensus 161 ~~~-~~~i~~~~~~~~l~~~~~~~~~~v~Vv~GF~g~~-------~~G~~ttLGRGGSD~tA~~la~~l~A~~v~i~tDV 232 (810)
T PRK09466 161 RAA-QPQVDEGLSYPLLQQLLAQHPGKRLVVTGFISRN-------EAGETVLLGRNGSDYSATLIGALAGVERVTIWSDV 232 (810)
T ss_pred CCC-CcccchhhhHHHHHHHHhccCCeEEEeeCccccC-------CCCCEEEcCCChHHHHHHHHHHHcCCCEEEEEeCC
Confidence 322 2222 112345677777654 799999832211 13332 3 8899999999999999999999999
Q ss_pred CccccCCCc-ccccccccccchhchHHHHhcCCCCCcccCCcHHHHHHHHHHHHcCCcEEEeeCCCcchHHHHhcCCcce
Q 005047 199 EGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVG 277 (716)
Q Consensus 199 dGVy~~dP~-~p~a~~i~~is~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a~~~gi~v~I~~g~~~~~l~~~~tg~~iG 277 (716)
||||++||+ .|+++.|++|||+|+.++...|++ .-+.++...+.+++||++|.|.+.|+ ..|
T Consensus 233 ~Gi~taDPr~v~~A~~i~~isy~Ea~ela~~Gak--------VlHp~ti~pa~~~~Ipi~V~ntf~p~---------~~G 295 (810)
T PRK09466 233 AGVYSADPRKVKDACLLPLLRLDEASELARLAAP--------VLHARTLQPVSGSDIDLQLRCSYQPE---------QGS 295 (810)
T ss_pred CccccCCcccCCCceEcccCCHHHHHHHHHcCcc--------ccCHHHHHHHHHcCCeEEEecCCCCC---------CCc
Confidence 999999995 899999999999999998887754 23457888999999999999988764 458
Q ss_pred eEEec
Q 005047 278 TLFHR 282 (716)
Q Consensus 278 T~i~~ 282 (716)
|++..
T Consensus 296 T~I~~ 300 (810)
T PRK09466 296 TRIER 300 (810)
T ss_pred eEEec
Confidence 88864
No 211
>PRK09436 thrA bifunctional aspartokinase I/homoserine dehydrogenase I; Provisional
Probab=99.77 E-value=5.7e-18 Score=200.98 Aligned_cols=237 Identities=18% Similarity=0.228 Sum_probs=168.4
Q ss_pred eEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhccc---CCc----------c-
Q 005047 16 RLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVN---SSL----------A- 81 (716)
Q Consensus 16 ~iVIKiGGs~l~~~~~~~~~~~~~~~a~~I~~l~~~G~~vvIVhGGg~~i~~~~~~~~~~~~---~~~----------~- 81 (716)
|.|.||||+++.+.. ++.++++.|....+. .++|+|+++.+.++..++....... ... +
T Consensus 1 m~V~KFGGtSv~~~~------~i~~v~~iI~~~~~~-~~~vVVVSA~~~vTd~L~~~~~~~~~~~~~~~~~~~~~~~~h~ 73 (819)
T PRK09436 1 MRVLKFGGTSVANAE------RFLRVADIIESNARQ-EQVAVVLSAPAKVTNHLVAMIEKAAKGDDAYPEILDAERIFHE 73 (819)
T ss_pred CEEEEeCccccCCHH------HHHHHHHHHHhhccc-CCEEEEEcCCcCcHHHHHHHHHHHhcCCchHHHHHHHHHHHHH
Confidence 369999999998743 678888888765444 5889999998778876544321100 000 0
Q ss_pred ---cccc--------------------cc---------cch---hHHHHHHhchHHHHHHHHHHhccCCCccce-----E
Q 005047 82 ---DLQK--------------------PQ---------NEL---DGKACAAVGQSSLMALYDTLFSQLDVTSSQ-----L 121 (716)
Q Consensus 82 ---~~~~--------------------~~---------~~l---~~~~~~a~g~~~~~~~~~~~l~~~gi~~~~-----~ 121 (716)
++.. .. ..+ ..+.+.+.|+..+..++...|.+.|+++.. +
T Consensus 74 ~~~~l~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~~~~~~~~~~~~d~i~s~GE~lSa~lla~~L~~~Gi~a~~ld~~~~ 153 (819)
T PRK09436 74 LLDGLAAALPGFDLAQLKAKVDQEFAQLKDILHGISLLGECPDSVNAAIISRGERLSIAIMAAVLEARGHDVTVIDPREL 153 (819)
T ss_pred HHHHHHhhccchhhHHHHHHHHHHHHHHHHHHHHHHhhccCChhhhhheeeHHHHHHHHHHHHHHHhCCCCeEEECHHHe
Confidence 0000 00 000 124666889988888899999999988653 4
Q ss_pred EecCccCCchhh-HhHHHHHHHHHH-hCCCeEEeeCCCceecCCCCCCCCCce--e--ecchHHHHHHHhhcCCCEEEEe
Q 005047 122 LVTDSDFRDEDF-RKQLYDTVQSLL-DLRVIPIFNENDAVSTRKAPYEDSSGI--F--WDNDSLAGLLALELKADLLVLL 195 (716)
Q Consensus 122 ~~~~~~~~~~~~-~~~~~~~i~~ll-~~g~iPV~~g~d~v~~~~~~~~~~g~~--~--~~sD~~A~~lA~~L~Ad~Li~~ 195 (716)
+++++++.+... .....+.+++++ +.+.|||+.|+-+ ....|.. + ++||+.|+++|..|+||.|+++
T Consensus 154 i~t~~~~~~~~~~~~~~~~~i~~~~~~~~~v~Vv~Gfig-------~~~~G~~ttlGRgGSD~~A~~~A~~l~A~~~~i~ 226 (819)
T PRK09436 154 LLADGHYLESTVDIAESTRRIAASFIPADHVILMPGFTA-------GNEKGELVTLGRNGSDYSAAILAACLDADCCEIW 226 (819)
T ss_pred EEecCCCCCceechHhhHHHHHHHHhcCCcEEEecCccc-------CCCCCCEEEeCCCCchHHHHHHHHHcCCCEEEEE
Confidence 556665554333 222335566654 4688999998211 1113333 2 7799999999999999999999
Q ss_pred ecCCccccCCC-cccccccccccchhchHHHHhcCCCCCcccCCcHHHHHHHHHHHHcCCcEEEeeCCCcchHHHHhcCC
Q 005047 196 SDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGK 274 (716)
Q Consensus 196 TDVdGVy~~dP-~~p~a~~i~~is~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a~~~gi~v~I~~g~~~~~l~~~~tg~ 274 (716)
|||||||++|| .+|++++|++|+++|+.++...| -+..+.+++..|.++|||++|.|++.|+
T Consensus 227 tdVdGvyt~DP~~~~~A~~i~~isy~ea~el~~~G--------~kvlhp~a~~~a~~~~Ipi~i~n~~~p~--------- 289 (819)
T PRK09436 227 TDVDGVYTADPRVVPDARLLKSLSYQEAMELSYFG--------AKVLHPRTIAPIAQFQIPCLIKNTFNPQ--------- 289 (819)
T ss_pred ECCCceECCCCCCCCCCeEeeEecHHHHHHHHhcC--------CccchHHHHHHHHHCCceEEEccCCCCC---------
Confidence 99999999999 58999999999999999876543 3567899999999999999999998875
Q ss_pred cceeEEecC
Q 005047 275 RVGTLFHRD 283 (716)
Q Consensus 275 ~iGT~i~~~ 283 (716)
..||+|...
T Consensus 290 ~~GT~I~~~ 298 (819)
T PRK09436 290 APGTLIGAE 298 (819)
T ss_pred CCceEEEec
Confidence 468888654
No 212
>cd04240 AAK_UC AAK_UC: Uncharacterized (UC) amino acid kinase-like proteins found mainly in archaea and a few bacteria. Sequences in this CD are members of the Amino Acid Kinase (AAK) superfamily.
Probab=99.77 E-value=1.1e-17 Score=167.06 Aligned_cols=201 Identities=24% Similarity=0.315 Sum_probs=127.3
Q ss_pred EEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhcccCCcccccccccchhHHHHHH
Q 005047 18 VVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAA 97 (716)
Q Consensus 18 VIKiGGs~l~~~~~~~~~~~~~~~a~~I~~l~~~G~~vvIVhGGg~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a 97 (716)
|||||||++.+ +..+.+.+..+. |++++||.|||+...+... ... ..++.+ . .....++.+
T Consensus 1 vvKiGGsl~~~---------~~~~~~~l~~~~--~~~v~iV~GGG~~A~~~r~-~~~--~~g~~~---~--~ad~mgila 61 (203)
T cd04240 1 VVKIGGSLIRE---------AVRLLRWLKTLS--GGGVVIVPGGGPFADVVRR-YQE--RKGLSD---A--AAHWMAILA 61 (203)
T ss_pred CEEEccccccc---------HHHHHHHHHhcc--CCCEEEEcCCcHHHHHHHH-HHH--HcCCCh---H--HHHHHHHHH
Confidence 79999999864 345666665553 7899999999886554331 111 111111 0 001122333
Q ss_pred hchHHHHHHHHHHhccCCCccceEEecCccCCchhhHhHHHHHHHHHHhCCCeEEeeCCCceecCCCCCCCCCcee-ecc
Q 005047 98 VGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIF-WDN 176 (716)
Q Consensus 98 ~g~~~~~~~~~~~l~~~gi~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~~g~iPV~~g~d~v~~~~~~~~~~g~~~-~~s 176 (716)
.-++. .+|.... . .. . . .+...+..++..|.|||+.+....-. ....+..+ +|+
T Consensus 62 t~~na------~~l~~~~--~--------~~---~-~-~~~~~~~~~~~~g~ipV~~P~~~~~~----~~~~~~~~~~tt 116 (203)
T cd04240 62 MEQYG------YLLADLE--P--------RL---V-A-RTLAELTDVLERGKIAILLPYRLLLD----TDPLPHSWEVTS 116 (203)
T ss_pred HHHHH------HHHhccC--C--------cc---c-c-CCHHHHHHHHHCCCcEEEeCchhhcc----cCCCCcccccCH
Confidence 32222 2222110 0 00 0 0 01246778899999999975111000 00012223 999
Q ss_pred hHHHHHHHhhcCCCEEEEeecCCccccCCCcccccccccccchhchHHHHhcCCCCCcccCCcHHHHHHHHHHHHcCCcE
Q 005047 177 DSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPV 256 (716)
Q Consensus 177 D~~A~~lA~~L~Ad~Li~~TDVdGVy~~dP~~p~a~~i~~is~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a~~~gi~v 256 (716)
|++|+++|.+|+|++|+++|||||||++| +++|++++.+|+.. . .... +|.+|+ +.++|+++
T Consensus 117 D~lAa~lA~~l~A~~Li~ltdVdGVy~~d-----a~~i~~i~~~e~~~---~----~~id-~~~~~~-----~~~~gi~v 178 (203)
T cd04240 117 DSIAAWLAKKLGAKRLVIVTDVDGIYEKD-----GKLVNEIAAAELLG---E----TSVD-PAFPRL-----LTKYGIRC 178 (203)
T ss_pred HHHHHHHHHHcCCCEEEEEeCCccccCCC-----CcCccccCHHHhCC---C----Ceeh-hhHHHH-----HHhCCCeE
Confidence 99999999999999999999999999875 89999999877642 1 1122 244444 57889999
Q ss_pred EEeeCCCcchHHHHhcCC-cceeEE
Q 005047 257 VITSGFAMDSIIKVLEGK-RVGTLF 280 (716)
Q Consensus 257 ~I~~g~~~~~l~~~~tg~-~iGT~i 280 (716)
+|+||+.|+++...+.|+ ..||.+
T Consensus 179 ~I~~g~~~~~l~~~l~g~~~~GT~I 203 (203)
T cd04240 179 YVVNGDDPERVLAALRGREGVGTRI 203 (203)
T ss_pred EEECCCCccHHHHHHCCCCCCCCCC
Confidence 999999999999988887 678853
No 213
>PRK08961 bifunctional aspartate kinase/diaminopimelate decarboxylase protein; Provisional
Probab=99.76 E-value=5.6e-18 Score=203.26 Aligned_cols=232 Identities=18% Similarity=0.173 Sum_probs=163.5
Q ss_pred ccCeEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhcccC-Cc----c------
Q 005047 13 DVKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNS-SL----A------ 81 (716)
Q Consensus 13 ~~~~iVIKiGGs~l~~~~~~~~~~~~~~~a~~I~~l~~~G~~vvIVhGGg~~i~~~~~~~~~~~~~-~~----~------ 81 (716)
.++++|.||||+++.+.+ .+.++++.|..-.+.|.++++|+++.+.++..++........ .. .
T Consensus 6 ~~~~~V~KFGGtSv~~~~------~~~~v~~ii~~~~~~~~~~vvVvSA~~~~Td~L~~~~~~~~~~~~~~~~~~i~~~~ 79 (861)
T PRK08961 6 TDRWVVLKFGGTSVSRRH------RWDTIAKIVRKRLAEGGRVLVVVSALSGVSNELEAIIAAAGAGDSASRVAAIRQRH 79 (861)
T ss_pred CCCcEEEEECccccCCHH------HHHHHHHHHHhhcccCCCEEEEEeCCCCchHHHHHHHHHHhccCHHHHHHHHHHHH
Confidence 357899999999998744 588888888765566889999999988787765332110000 00 0
Q ss_pred -----cc--c----------ccc---------cch---hHHHHHHhchHHHHHHHHHHhccCCCccc-----eEEecCcc
Q 005047 82 -----DL--Q----------KPQ---------NEL---DGKACAAVGQSSLMALYDTLFSQLDVTSS-----QLLVTDSD 127 (716)
Q Consensus 82 -----~~--~----------~~~---------~~l---~~~~~~a~g~~~~~~~~~~~l~~~gi~~~-----~~~~~~~~ 127 (716)
++ . .+. ..+ ....+.+.|+..+..++..+|++.|+++. ++++++++
T Consensus 80 ~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~i~s~GE~lSa~lla~~L~~~Gi~a~~ld~~~~~~~~~~ 159 (861)
T PRK08961 80 RELLAELGVDAEAVLAERLAALQRLLDGIRALTRASLRWQAEVLGQGELLSTTLGAAYLEASGLDMGWLDAREWLTALPQ 159 (861)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHhccCChhhhheEEEehHHHHHHHHHHHHHhCCCCcEEEcHHHhEeecCc
Confidence 00 0 000 000 01234478888888888999999998864 33344332
Q ss_pred CC--chhhH-------hHHHHHHHHHHhCC-CeEEeeCCCceecCCCCCCCCCce--e--ecchHHHHHHHhhcCCCEEE
Q 005047 128 FR--DEDFR-------KQLYDTVQSLLDLR-VIPIFNENDAVSTRKAPYEDSSGI--F--WDNDSLAGLLALELKADLLV 193 (716)
Q Consensus 128 ~~--~~~~~-------~~~~~~i~~ll~~g-~iPV~~g~d~v~~~~~~~~~~g~~--~--~~sD~~A~~lA~~L~Ad~Li 193 (716)
+. ....+ ....+.++.+++.+ .|||+.|.-.+.. .|.. + +++|+.|+++|.+|+||+|+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Vv~Gf~g~~~-------~g~~ttLgrggsD~~A~~iA~~l~a~~~~ 232 (861)
T PRK08961 160 PNQSEWSQYLSVSCQWQSDPALRERFAAQPAQVLITQGFIARNA-------DGGTALLGRGGSDTSAAYFAAKLGASRVE 232 (861)
T ss_pred cccccccccccceecHhhHHHHHHHHhccCCeEEEeCCcceeCC-------CCCEEEEeCCchHHHHHHHHHHcCCCEEE
Confidence 11 01111 12345666777665 4999998322221 3332 3 89999999999999999999
Q ss_pred EeecCCccccCCC-cccccccccccchhchHHHHhcCCCCCcccCCcHHHHHHHHHHHHcCCcEEEeeCCCcc
Q 005047 194 LLSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMD 265 (716)
Q Consensus 194 ~~TDVdGVy~~dP-~~p~a~~i~~is~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a~~~gi~v~I~~g~~~~ 265 (716)
++|||||||++|| .+|++++|++|+++|+.++.. .|++..|.+++..|.++||+++|.|++.|+
T Consensus 233 i~tdv~Gv~t~dP~~~~~a~~i~~ls~~e~~el~~--------~g~~v~~~~a~~~a~~~~i~i~v~~~~~~~ 297 (861)
T PRK08961 233 IWTDVPGMFSANPKEVPDARLLTRLDYDEAQEIAT--------TGAKVLHPRSIKPCRDAGIPMAILDTERPD 297 (861)
T ss_pred EEeCCCccccCCCCCCCCceEecccCHHHHHHHHH--------CCCeEECHHHHHHHHHCCCCEEEEeCCCCC
Confidence 9999999999999 589999999999999998765 467889999999999999999999998774
No 214
>PRK09181 aspartate kinase; Validated
Probab=99.63 E-value=2.8e-15 Score=167.11 Aligned_cols=162 Identities=19% Similarity=0.200 Sum_probs=121.5
Q ss_pred HHHHHhchHHHHHHHHHHhccCCCccceEEecCccCCchhhHhHHHHHHHHHHh----CCCeEEeeCCCceecCCCCCCC
Q 005047 93 KACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLD----LRVIPIFNENDAVSTRKAPYED 168 (716)
Q Consensus 93 ~~~~a~g~~~~~~~~~~~l~~~gi~~~~~~~~~~~~~~~~~~~~~~~~i~~ll~----~g~iPV~~g~d~v~~~~~~~~~ 168 (716)
+.+.+.|+..+..++..+|...|+++..+-.+. +....... ..+.+...++ .+.|||+.|+ ++..
T Consensus 140 D~l~s~GE~lSa~lla~~L~~~Gi~a~~ld~~~--~~~~~~~~-~~~~i~~~l~~~~~~~~v~Vv~GF--------~~~~ 208 (475)
T PRK09181 140 EMLASIGEAHSAFNTALLLQNRGVNARFVDLTG--WDDDDPLT-LDERIKKAFKDIDVTKELPIVTGY--------AKCK 208 (475)
T ss_pred HHHhhHhHHHHHHHHHHHHHhCCCCeEEecccc--ccCCcccc-hHHHHHHHHhhhccCCcEEEecCC--------cCCC
Confidence 466788988888889999999998876432211 11001111 1344555555 4789999983 1112
Q ss_pred CCce--e--ecchHHHHHHHhhcCCCEEEEeecCCccccCCCc-c--cccccccccchhchHHHHhcCCCCCcccCCcHH
Q 005047 169 SSGI--F--WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-E--PNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTA 241 (716)
Q Consensus 169 ~g~~--~--~~sD~~A~~lA~~L~Ad~Li~~TDVdGVy~~dP~-~--p~a~~i~~is~~e~~~~~~~g~~~~~~~ggM~~ 241 (716)
.|.. + ++||+.|+.+|.+|+|+.+.++|||+ ||++||+ . |+++.|++|||+|+.++...|++ .-
T Consensus 209 ~G~itTLGRGGSDyTAailAa~L~A~~~~IwTDV~-I~taDPriV~~~~A~~i~~lsy~Ea~ELA~~GAk--------VL 279 (475)
T PRK09181 209 EGLMRTFDRGYSEMTFSRIAVLTGADEAIIHKEYH-LSSADPKLVGEDKVVPIGRTNYDVADQLANLGME--------AI 279 (475)
T ss_pred CCCEEecCCChHHHHHHHHHHHcCCCEEEEeCCCc-cccCCCCcCCCCCCeEcCccCHHHHHHHHHcCch--------hc
Confidence 3332 3 89999999999999999999999997 9999995 6 79999999999999998887754 33
Q ss_pred HHHHHHHHHHcCCcEEEeeCCCcchHHHHhcCCcceeEEecC
Q 005047 242 KVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRD 283 (716)
Q Consensus 242 Kl~aa~~a~~~gi~v~I~~g~~~~~l~~~~tg~~iGT~i~~~ 283 (716)
+.++...|.+++||++|.|.+.|+ ..||++...
T Consensus 280 Hp~ti~pa~~~~Ipi~V~nt~~p~---------~~GT~I~~~ 312 (475)
T PRK09181 280 HPKAAKGLRQAGIPLRIKNTFEPE---------HPGTLITKD 312 (475)
T ss_pred CHHHHHHHHHcCCeEEEecCCCCC---------CCCeEEecC
Confidence 457889999999999999988764 469998654
No 215
>cd04248 AAK_AK-Ectoine AAK_AK-Ectoine: Amino Acid Kinase Superfamily (AAK), AK-Ectoine; this CD includes the N-terminal catalytic domain of the aspartokinase of the ectoine (1,4,5,6-tetrahydro-2-methyl pyrimidine-4-carboxylate) biosynthetic pathway found in Methylomicrobium alcaliphilum, Vibrio cholerae, and other various halotolerant or halophilic bacteria. Bacteria exposed to hyperosmotic stress accumulate organic solutes called 'compatible solutes' of which ectoine, a heterocyclic amino acid, is one. Apart from its osmotic function, ectoine also exhibits a protective effect on proteins, nucleic acids and membranes against a variety of stress factors. de novo synthesis of ectoine starts with the phosphorylation of L-aspartate and shares its first two enzymatic steps with the biosynthesis of amino acids of the aspartate family: aspartokinase and L-aspartate-semialdehyde dehydrogenase. The M. alcaliphilum and the V. cholerae aspartokinases are encoded on the ectABCask operon.
Probab=99.63 E-value=8.8e-15 Score=151.62 Aligned_cols=153 Identities=15% Similarity=0.140 Sum_probs=112.2
Q ss_pred HHHHHhchHHHHHHHHHHhccCCCccceEEecC----ccCCchhhHhHHHHHHHHHHhCCCeEEeeCCCceecCCCCCCC
Q 005047 93 KACAAVGQSSLMALYDTLFSQLDVTSSQLLVTD----SDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYED 168 (716)
Q Consensus 93 ~~~~a~g~~~~~~~~~~~l~~~gi~~~~~~~~~----~~~~~~~~~~~~~~~i~~ll~~g~iPV~~g~d~v~~~~~~~~~ 168 (716)
..+.++|+..+..++...|+..|+++.-+-.+. +++..... ..+.+..+...+.|||+.|+ .+..
T Consensus 134 d~l~S~GE~~Sa~l~a~~L~~~Gi~A~~vD~~~~~~~~~~t~~~~---i~~~~~~~~~~~~v~IvtGF--------~~~~ 202 (304)
T cd04248 134 ELLASLGEAHSAFNTALLLQNRGVNARFVDLSGWRDSGDMTLDER---ISEAFRDIDPRDELPIVTGY--------AKCA 202 (304)
T ss_pred HHHhhhCHHHHHHHHHHHHHHCCCCeEEECcccccccCCCCcHHH---HHHHHHhhccCCcEEEeCCc--------cCCC
Confidence 466788888777788899999998765432221 11111111 12223333336789999983 1112
Q ss_pred CCce--e--ecchHHHHHHHhhcCCCEEEEeecCCccccCCCc-c--cccccccccchhchHHHHhcCCCCCcccCCcHH
Q 005047 169 SSGI--F--WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-E--PNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTA 241 (716)
Q Consensus 169 ~g~~--~--~~sD~~A~~lA~~L~Ad~Li~~TDVdGVy~~dP~-~--p~a~~i~~is~~e~~~~~~~g~~~~~~~ggM~~ 241 (716)
+|.. + +.||+.|+.+|.+|+|+.+.++|||+ ||++||+ . |+++.|++|||+|+.++...|++ .-
T Consensus 203 ~G~itTLGRGGSDyTAs~iAa~l~A~ev~I~TDV~-i~taDPriV~~~~A~~i~~lsY~EA~ELA~~Gak--------vL 273 (304)
T cd04248 203 EGLMREFDRGYSEMTFSRIAVLTGASEAIIHKEFH-LSSADPKLVGEDKARPIGRTNYDVADQLANLGME--------AI 273 (304)
T ss_pred CCCEEEcCCCcHHHHHHHHHHHcCCCEEEEECCCc-eecCCCCccCCCCceEeCccCHHHHHHHHHcChh--------hc
Confidence 3433 3 89999999999999999999999996 9999995 6 68999999999999998877643 23
Q ss_pred HHHHHHHHHHcCCcEEEeeCCCcc
Q 005047 242 KVNAAYCAACAGIPVVITSGFAMD 265 (716)
Q Consensus 242 Kl~aa~~a~~~gi~v~I~~g~~~~ 265 (716)
+.+++..+.+++||++|.|.+.|+
T Consensus 274 HP~ai~pa~~~~IPi~Vkntf~P~ 297 (304)
T cd04248 274 HPKAAKGLRQAGIPLRVKNTFEPD 297 (304)
T ss_pred CHHHHHHHHHcCCeEEEecCCCCC
Confidence 457889999999999999988774
No 216
>KOG0456 consensus Aspartate kinase [Amino acid transport and metabolism]
Probab=99.45 E-value=6.2e-13 Score=137.22 Aligned_cols=167 Identities=17% Similarity=0.251 Sum_probs=119.2
Q ss_pred HHHHHhchHHHHHHHHHHhccCCCccceEE------ecCccCCchhh-HhHHHHHHHHH----HhCCCeEEeeCCCceec
Q 005047 93 KACAAVGQSSLMALYDTLFSQLDVTSSQLL------VTDSDFRDEDF-RKQLYDTVQSL----LDLRVIPIFNENDAVST 161 (716)
Q Consensus 93 ~~~~a~g~~~~~~~~~~~l~~~gi~~~~~~------~~~~~~~~~~~-~~~~~~~i~~l----l~~g~iPV~~g~d~v~~ 161 (716)
+.+.++|++.+...+...|...|..+.++- ++.++|..... +...+...+.+ ...+.+||+.|.=.
T Consensus 193 D~lvs~GE~lS~rf~aA~lnd~G~kar~~D~~~I~~~~~d~~t~~d~~~a~~~av~k~~~~~~aken~VPVvTGf~G--- 269 (559)
T KOG0456|consen 193 DYLVSFGECLSTRFFAAYLNDIGHKARQYDAFEIGFITTDDFTNDDILEATYPAVSKLLSGDWAKENAVPVVTGFLG--- 269 (559)
T ss_pred hHhhhhhhHHHHHHHHHHHHhcCccceeechhheeccccccccchhHHHHHHHHHHHhcccccccCCccceEeeccc---
Confidence 466789999888889999999998877652 22233332221 11112222222 34577999998211
Q ss_pred CCCCCCCCCce---e--ecchHHHHHHHhhcCCCEEEEeecCCccccCCC-cccccccccccchhchHHHHhcCCCCCcc
Q 005047 162 RKAPYEDSSGI---F--WDNDSLAGLLALELKADLLVLLSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGDKSRVG 235 (716)
Q Consensus 162 ~~~~~~~~g~~---~--~~sD~~A~~lA~~L~Ad~Li~~TDVdGVy~~dP-~~p~a~~i~~is~~e~~~~~~~g~~~~~~ 235 (716)
-++ .++. + +.+|..|+.+|.+|++|.+.++.|||||++.|| ..|.|++++.++++|+.++..+|+.
T Consensus 270 --k~~--~tg~lt~lGRG~sDl~At~i~~al~~~EiQVWKdVDGv~T~DP~~~p~Ar~vp~lT~dEAaELaYfGaq---- 341 (559)
T KOG0456|consen 270 --KGW--PTGALTTLGRGGSDLTATTIGKALGLDEIQVWKDVDGVLTCDPRIYPGARLVPYLTFDEAAELAYFGAQ---- 341 (559)
T ss_pred --cCc--cccceecccCCchhhHHHHHHHHcCchhhhhhhhcCceEecCCccCCCccccCccCHHHHHHHHhhhhh----
Confidence 011 1121 2 789999999999999999999999999999999 6999999999999999998887653
Q ss_pred cCCcHHHHHHHHHHHHcCCcEEEeeCCCcchHHHHhcCCcceeEEecC
Q 005047 236 RGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRD 283 (716)
Q Consensus 236 ~ggM~~Kl~aa~~a~~~gi~v~I~~g~~~~~l~~~~tg~~iGT~i~~~ 283 (716)
.-+..+...+.+..|||+|-|...| ...||+|.++
T Consensus 342 ----VlHP~sM~~~~~~~IPvRvKN~~NP---------~~~GTvI~~d 376 (559)
T KOG0456|consen 342 ----VLHPFSMRPAREGRIPVRVKNSYNP---------TAPGTVITPD 376 (559)
T ss_pred ----hccccccchhhccCcceEeecCCCC---------CCCceEeccc
Confidence 1223445567888999999987655 2569998876
No 217
>PF05893 LuxC: Acyl-CoA reductase (LuxC); InterPro: IPR008670 This family consists of several bacterial Acyl-CoA reductase (LuxC) proteins. The channelling of fatty acids into the fatty aldehyde substrate for the bacterial bioluminescence reaction is catalysed by a fatty acid reductase multienzyme complex, which channels fatty acids through the thioesterase (LuxD), synthetase (LuxE) and reductase (LuxC) components [].; GO: 0003995 acyl-CoA dehydrogenase activity, 0008218 bioluminescence, 0055114 oxidation-reduction process
Probab=99.32 E-value=1.3e-09 Score=119.91 Aligned_cols=244 Identities=15% Similarity=0.135 Sum_probs=167.0
Q ss_pred EEEeecceeEEEEEcCC-CchhHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEec--C-Cc
Q 005047 396 LEKTSCPLGVLLIVFES-RPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVT--S-RE 470 (716)
Q Consensus 396 ~~~~~~PlGVv~~I~p~-~P~~~~~~~~~ALaaGNtvv~Kps~~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~--~-~~ 470 (716)
.+..+.|.|+|+.|.|- -|.+.++.++.+|.+||..|+|+|+.-|.++..|++.+.+...+. + ...+.++. + ..
T Consensus 81 ~~~~~~p~g~v~Hi~agNvp~~~~~S~~~~lL~gn~nivK~ss~d~~~~~~l~~~l~~~~~~~~l-~~~i~v~~~~~~d~ 159 (399)
T PF05893_consen 81 GYVRAFPRGLVFHIAAGNVPLVGFYSLVRGLLSGNANIVKLSSRDPFLAPALLRSLAEIDPEHPL-ADSIAVVYWPGGDE 159 (399)
T ss_pred chhhccCCceEEEEcCCCccchHHHHHHHHHHhCCceEEECCCCchhHHHHHHHHHHhhCccchh-hhcEEEEEecCCch
Confidence 56779999999999995 588999999999999999999999999999999999887632221 1 23566663 4 45
Q ss_pred hHHHhhcCCCCccEEEeecCHHHHHHHHHhcC-CCEEEecCCc-ceEEEcCCCCHHHHHHHHHHhcCC-CCCccccccce
Q 005047 471 EIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK-IPVLGHADGI-CHVYVDKSANLDVAKNIVIDAKID-YPAACNAMVET 547 (716)
Q Consensus 471 ~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a~-~~~~lElGGk-~p~iV~~dADl~~Aa~~iv~~~f~-n~g~C~a~~~r 547 (716)
++.+.+.. ..|+|+.+||.++.+.|.+... .+-.+.-|-| +-.|+..+++++.+++.+.+=.+. +++.|.|+ +.
T Consensus 160 ~~~~~~~~--~~D~vv~wGgd~ti~~ir~~~~~~~~~i~fg~k~S~avi~~~~~~~~~a~~~a~Di~~~dQ~aCsSp-~~ 236 (399)
T PF05893_consen 160 ELEEALSQ--QADAVVAWGGDETIRAIRQPLPPGARLIEFGPKYSFAVIDAEAELEEAARRLANDIFLFDQQACSSP-QV 236 (399)
T ss_pred HHHHHHHH--HCCEEEEeCCHHHHHHHHHHcCCCCcEeeeCCceEEEEEcCchhHHHHHHHHHHHHHHhhCcccCCC-eE
Confidence 56666653 4999999999999999977443 3444554444 678888889999999888775554 45599999 99
Q ss_pred EEEe---CccCChhhHHHHHHHHHhcCCEEe-cC----cc-------cc-----------ccc--c-----C--CCCccc
Q 005047 548 LLVH---KDLACNGALNELVVELQHEGVGLF-GG----PR-------AS-----------KLL--Q-----I--PETRLF 592 (716)
Q Consensus 548 v~V~---~~i~dd~f~~~l~~~~~~~~~~~~-g~----~~-------~~-----------~~~--p-----v--~~~~~~ 592 (716)
+||. ..-. ++|.++|.+++++..-.+- +. .. .. ..+ + | .+....
T Consensus 237 ifv~~g~~~~~-~~f~~~L~~~L~~~~~~~p~~~~s~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~~~~ 315 (399)
T PF05893_consen 237 IFVETGDGDSV-EEFAERLAEALERAAERYPRGELSIDEAAAISSLRAEAELRYALDGEYRVWSSDDNSWTVIVSPEPPL 315 (399)
T ss_pred EEEECCCcccH-HHHHHHHHHHHHHHHHhCCCcCCCHHHHHHHHHHHHHHHHHHHhcCCcceeecCCCCEEEEECCCccc
Confidence 9998 2334 5888888777765421100 00 00 00 000 0 1 111112
Q ss_pred cccccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEccCHHHHHHHHH-ccCcc
Q 005047 593 HHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLC-QVDSA 645 (716)
Q Consensus 593 ~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~i~t~d~~~a~~~~~-~~~~G 645 (716)
...-++=.+.|.++++++|++..+|...-=-|.+++... ++...+++ -..+|
T Consensus 316 ~~~pl~r~v~v~~v~~~~e~~~~l~~~~~lQTvgi~~~~-~~~~~~~~~l~~~G 368 (399)
T PF05893_consen 316 LPSPLNRTVYVVPVDSLEELVPYLRPKRGLQTVGIYPWS-ERLEELARALAAAG 368 (399)
T ss_pred ccCCCCCEEEEEEcCCHHHHHHHhhhcCCCeeEEEecCh-hhHHHHHHHHHhcC
Confidence 222234478899999999999999988431467776554 44555555 34444
No 218
>COG2054 Uncharacterized archaeal kinase related to aspartokinases, uridylate kinases [General function prediction only]
Probab=99.32 E-value=7.8e-11 Score=110.39 Aligned_cols=94 Identities=24% Similarity=0.326 Sum_probs=78.5
Q ss_pred ecchHHHHHHHhhcCCCEEEEeecCCccccCCCcccccccccccchhchHHHHhcCCCCCcccCCcHHHHHHHHHHHHcC
Q 005047 174 WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAG 253 (716)
Q Consensus 174 ~~sD~~A~~lA~~L~Ad~Li~~TDVdGVy~~dP~~p~a~~i~~is~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a~~~g 253 (716)
++||.++..+|+++++.+++++|||||||+.+| +++++++|+.+|+.. + ...-.+..|+ .+.+.+
T Consensus 116 VTSDsis~~Ia~~~~~~~vv~aTDVdGI~~~~~---~~kLv~eI~A~dl~~----~---~t~vD~~~P~-----Ll~k~~ 180 (212)
T COG2054 116 VTSDSISVWIAAKAGATEVVKATDVDGIYEEDP---KGKLVREIRASDLKT----G---ETSVDPYLPK-----LLVKYK 180 (212)
T ss_pred ecccHHHHHHHHHcCCcEEEEEecCCcccccCC---cchhhhhhhHhhccc----C---cccccchhhH-----HHHHcC
Confidence 999999999999999999999999999999965 468999999998864 1 1223445565 467889
Q ss_pred CcEEEeeCCCcchHHHHhcCC-cceeEEec
Q 005047 254 IPVVITSGFAMDSIIKVLEGK-RVGTLFHR 282 (716)
Q Consensus 254 i~v~I~~g~~~~~l~~~~tg~-~iGT~i~~ 282 (716)
++++|+||..|+++.....|+ .+||.+..
T Consensus 181 m~~~Vvng~~pervi~~lrGk~~v~T~Ivg 210 (212)
T COG2054 181 MNCRVVNGKEPERVILALRGKEVVGTLIVG 210 (212)
T ss_pred CceEEECCCCHHHHHHHHhccccceEEEeC
Confidence 999999999999998888875 46998865
No 219
>KOG2436 consensus Acetylglutamate kinase/acetylglutamate synthase [Amino acid transport and metabolism]
Probab=99.19 E-value=8.9e-11 Score=126.33 Aligned_cols=243 Identities=20% Similarity=0.217 Sum_probs=150.2
Q ss_pred cCeEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhcccCCcccc-ccc---ccc
Q 005047 14 VKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADL-QKP---QNE 89 (716)
Q Consensus 14 ~~~iVIKiGGs~l~~~~~~~~~~~~~~~a~~I~~l~~~G~~vvIVhGGg~~i~~~~~~~~~~~~~~~~~~-~~~---~~~ 89 (716)
.+.+|+|-|+...++ .+..++++++.|+..|.++|||||+++|+++.+. .+++++.+.+. +.+ .+.
T Consensus 95 q~fvV~~~g~~~~t~--------~~~sl~s~lafl~h~gl~pIvv~g~~~qin~~l~--~~~ie~~y~~~~RvTda~t~q 164 (520)
T KOG2436|consen 95 QKFVVIKSGEAISTS--------LLHSLASDLAFLHHVGLRPIVVPGTQPQINRLLA--ERGIEPEYVDGYRVTDAHTLQ 164 (520)
T ss_pred ceEEEEecccccccc--------hHHHHHHHHHHHhcCCceEEEecCccHHHHHHHH--HcCCCcccccceecccHHHHH
Confidence 344555555544332 2688999999999999999999999999999653 35666555552 222 111
Q ss_pred hhHHHHHHhchHHHHHHHHHHhccCCCc---------cceEEecC-------ccCCchhh-HhHHHHHHHHHHhCCCeEE
Q 005047 90 LDGKACAAVGQSSLMALYDTLFSQLDVT---------SSQLLVTD-------SDFRDEDF-RKQLYDTVQSLLDLRVIPI 152 (716)
Q Consensus 90 l~~~~~~a~g~~~~~~~~~~~l~~~gi~---------~~~~~~~~-------~~~~~~~~-~~~~~~~i~~ll~~g~iPV 152 (716)
+.+. .-+++.... ++ ..|++.|-+ .......+ .+|+-.+. .+.+.+.|+++++.|.+|+
T Consensus 165 ~~~~--~~~~E~n~~-lv-~nL~~~g~~ar~~s~g~~v~~~f~a~~~~v~d~~~y~~~gei~~vd~d~i~~l~~~G~mp~ 240 (520)
T KOG2436|consen 165 AAKE--SVSLEANLN-LV-INLSQLGTRARPSSSGVRVGNFFPADRNGVLDGEDYGLVGEIKKVDVDRIRHLLDAGSMPL 240 (520)
T ss_pred Hhhh--cchhhhhhH-HH-HHHHHhhceeccccccccccceeecccccccccceeeeecccceechhhhhhhhhCCCchh
Confidence 1111 011111111 11 112222211 11111111 22222222 2256799999999999999
Q ss_pred eeCCCceecCCCCCCCCCcee-ecchHHHHHHHhhcCCCEEEEeecCCccccCCCcccccccccccchhchHHHHhcCCC
Q 005047 153 FNENDAVSTRKAPYEDSSGIF-WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDK 231 (716)
Q Consensus 153 ~~g~d~v~~~~~~~~~~g~~~-~~sD~~A~~lA~~L~Ad~Li~~TDVdGVy~~dP~~p~a~~i~~is~~e~~~~~~~g~~ 231 (716)
+.. +..+.+|..+ +|+|++|..+|..|+|+++++++|+.-+...+ ++.++.++.+|....+...+.
T Consensus 241 L~s--------la~TaSGqvlnvNa~~~a~elA~~L~~~kli~l~d~g~~l~e~-----ge~~S~l~l~~e~~~l~k~~q 307 (520)
T KOG2436|consen 241 LRS--------LAATASGQVLNVNADEVAGELALALGPDKLILLMDKGRILKEN-----GEDISSLILQEEDAGLRKPSQ 307 (520)
T ss_pred ehh--------hcccCccceEEeeHHHHhhHHHhccCcceeEEecccccccccC-----cccccccccchhHhhhhhhhh
Confidence 974 2334467777 99999999999999999999999983234443 678888988888777666555
Q ss_pred CCcccCCcHHHHHHHHHHHHcCCcEEEeeCCCcchH-HHHhcCCcceeEEecC
Q 005047 232 SRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSI-IKVLEGKRVGTLFHRD 283 (716)
Q Consensus 232 ~~~~~ggM~~Kl~aa~~a~~~gi~v~I~~g~~~~~l-~~~~tg~~iGT~i~~~ 283 (716)
...++.+|.+++.....+.-....-+.+....++++ ...++....+|.+...
T Consensus 308 q~~~a~~~v~aV~~~~~~~~p~~~s~~i~~~t~~n~~~~~~te~G~~t~~~~g 360 (520)
T KOG2436|consen 308 QKNIAANNVKAVKDGIDSSLPRPSSYNIAITTQQNLIKELFTEKGAGTLISGG 360 (520)
T ss_pred hcccccccchhhhhheeeccCcCCCCCcceeecccccceeeccCCCCccccCc
Confidence 557888898888887766322211233334445554 5567777777777654
No 220
>KOG2449 consensus Methylmalonate semialdehyde dehydrogenase [Amino acid transport and metabolism; Carbohydrate transport and metabolism]
Probab=98.85 E-value=9.6e-10 Score=98.30 Aligned_cols=68 Identities=16% Similarity=0.156 Sum_probs=65.5
Q ss_pred CCCccccccccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEccCHHHHHHHHHccCcceEEEcCCcC
Q 005047 587 PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTR 654 (716)
Q Consensus 587 ~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~i~t~d~~~a~~~~~~~~~G~v~vN~~~~ 654 (716)
|.|.++.||+||||+..+.-+++||||.++|+++||-...|||.|.+.++++++..++|.+.+|.+..
T Consensus 76 P~ms~ykeeI~gpVlv~l~~~tldd~I~Iin~nPygn~t~i~Tsn~atark~~~e~~a~qig~~~~ip 143 (157)
T KOG2449|consen 76 PNMSCYKEEIFGPVLVRLETETLDDAIFIINNNPYGNGTAIFTSNGATARKFCHEPDAGQIGANVPIP 143 (157)
T ss_pred CCcceeHhhhhcceEEEEeecCCCceeEEEecCCCCceeEEEecCcHHhhhhhcCCCccceecccccc
Confidence 68999999999999999999999999999999999999999999999999999999999999998653
No 221
>PF07368 DUF1487: Protein of unknown function (DUF1487); InterPro: IPR009961 This family consists of several uncharacterised proteins from Drosophila melanogaster. The function of this family is unknown.
Probab=98.44 E-value=1.4e-06 Score=85.69 Aligned_cols=133 Identities=15% Similarity=0.169 Sum_probs=97.6
Q ss_pred EEEcCCCCHHHHHHHHHHhcCCCCCccccccceEEEeCccCChhhHHHHHHHHHhcCCE--------------------E
Q 005047 515 VYVDKSANLDVAKNIVIDAKIDYPAACNAMVETLLVHKDLACNGALNELVVELQHEGVG--------------------L 574 (716)
Q Consensus 515 ~iV~~dADl~~Aa~~iv~~~f~n~g~C~a~~~rv~V~~~i~dd~f~~~l~~~~~~~~~~--------------------~ 574 (716)
+||++|.||+.|+..++.+.-..-+ ..+. -.|+|||+|. |+|++++..+++.+.-. .
T Consensus 8 MIvfe~GDlnsA~~~L~~sl~~Pf~-~~~V-atVlVqEsir-eefi~rvr~~m~pl~~~va~Hpny~rsl~~i~~l~~~~ 84 (215)
T PF07368_consen 8 MIVFEDGDLNSAMHYLLESLHNPFA-PGAV-ATVLVQESIR-EEFIERVRSRMKPLSPQVANHPNYLRSLKKIKCLNAKT 84 (215)
T ss_pred EEEEeCCCHHHHHHHHHHHHhCccc-CCcE-EEEEEeHHHH-HHHHHHHHHhCccCChhhccCcHHHHHHHHHHhcCCeE
Confidence 8999999999999999998543223 2234 5699999999 79999999988765321 1
Q ss_pred e-cCccccccccCCCCcc----cccccc----CceEEEEEeCCHHHHHHHHHhc--CCCceeEEEccCHHHHHHHHHccC
Q 005047 575 F-GGPRASKLLQIPETRL----FHHEYN----SMVCTVEIVDDVRAAIDHIHQH--GSAHTDCIVAEDQKVAETFLCQVD 643 (716)
Q Consensus 575 ~-g~~~~~~~~pv~~~~~----~~eE~F----GPVl~v~~~~~~deAi~~aN~~--~~GL~a~i~t~d~~~a~~~~~~~~ 643 (716)
. ++.. ..|...+++ +..-.| .+|+++-+|.+..||+++.+.. +|+ +.|||++-.+.+..++.+++
T Consensus 85 I~~~~~---~~~~~aSPilV~d~~h~~fg~~PTgViTlhtFRt~~Ea~~l~~kE~l~f~-SVsiW~ekla~~Yel~~~l~ 160 (215)
T PF07368_consen 85 IVADFE---NVPPPASPILVCDFTHSYFGDGPTGVITLHTFRTPKEAIELCAKETLPFD-SVSIWNEKLASAYELAARLP 160 (215)
T ss_pred EEeccc---CCCCCCCCEEEcCCCHHHcCCCCCeEEEEEccCCHHHHHHHHhcCCCCcc-eEEEeCcHHHHHHHHHHhCC
Confidence 1 1000 001000111 222333 3599999999999999999975 566 99999999999999999999
Q ss_pred cceEEEcCCcC
Q 005047 644 SAAVFHNASTR 654 (716)
Q Consensus 644 ~G~v~vN~~~~ 654 (716)
+..++||+...
T Consensus 161 ~~~f~iNC~~V 171 (215)
T PF07368_consen 161 CDTFYINCFNV 171 (215)
T ss_pred CCEEEEEeccC
Confidence 99999998643
No 222
>PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed
Probab=97.89 E-value=3.7e-05 Score=95.27 Aligned_cols=102 Identities=13% Similarity=0.193 Sum_probs=76.0
Q ss_pred CCeEEEEeecceeEEEEEcCCCchhHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccccCcCceEEecCCch
Q 005047 392 DGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDTVGEKLIGLVTSREE 471 (716)
Q Consensus 392 ~~~~~~~~~~PlGVv~~I~p~~P~~~~~~~~~ALaaGNtvv~Kps~~tp~t~~~l~~l~~~al~~alP~gvv~vv~~~~~ 471 (716)
.|........|.|+|+.|+||+.. ....++.||++||+||+||++.++ +.++. +|..+.+.+.
T Consensus 1068 TGEsN~L~l~~RG~vlcisp~~~~-~l~Qi~AALaaGn~vi~~~~~~~~-------~~~~~-----Lp~~~~~~~~---- 1130 (1208)
T PRK11905 1068 TGESNLLSLHPRGRVLCVADTEEA-LLRQLAAALATGNVAVVAADSGLA-------AALAD-----LPGLVAARID---- 1130 (1208)
T ss_pred CCcceeEEecCCceEEEECCcHHH-HHHHHHHHHHhCCEEEEeCCcccH-------HHHHh-----Cccccccccc----
Confidence 455666778999999999999743 445777899999999999999876 22221 7776666653
Q ss_pred HHHhhcCCCCccEEEeecCHHHHHHHHHhcC------CCEEEecC
Q 005047 472 IPDLLKLDDVIDLVIPRGSNKLVSQIKESTK------IPVLGHAD 510 (716)
Q Consensus 472 ~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a~------~~~~lElG 510 (716)
++..+..+++|+.|.||||+++.+.|.++.+ .|++.|..
T Consensus 1131 ~~~~~~~~~~i~~V~~~G~~~~a~~i~~~LA~R~G~Ivpliaet~ 1175 (1208)
T PRK11905 1131 WTQDWEADDPFAGALLEGDAERARAVRQALAARPGAIVPLIAAEP 1175 (1208)
T ss_pred cccccccCCcccEEEEeCCHHHHHHHHHHHHhCCCCcceEEecCC
Confidence 2335556778999999999999998866531 56666653
No 223
>PF00815 Histidinol_dh: Histidinol dehydrogenase; InterPro: IPR012131 Histidinol dehydrogenase (HDH) catalyzes the terminal step in the biosynthesis of histidine in bacteria, fungi, and plants, the four-electron oxidation of L-histidinol to histidine. In 4-electron dehydrogenases, a single active site catalyses 2 separate oxidation steps: oxidation of the substrate alcohol to an intermediate aldehyde; and oxidation of the aldehyde to the product acid, in this case His []. The reaction proceeds via a tightly- or covalently-bound inter-mediate, and requires the presence of 2 NAD molecules []. By contrast with most dehydrogenases, the substrate is bound before the NAD coenzyme []. A Cys residue has been implicated in the catalytic mechanism of the second oxidative step []. In bacteria HDH is a single chain polypeptide; in fungi it is the C-terminal domain of a multifunctional enzyme which catalyzes three different steps of histidine biosynthesis; and in plants it is expressed as nuclear encoded protein precursor which is exported to the chloroplast [].; GO: 0004399 histidinol dehydrogenase activity, 0008270 zinc ion binding, 0051287 NAD binding, 0000105 histidine biosynthetic process, 0055114 oxidation-reduction process; PDB: 1KAE_B 1K75_A 1KAH_A 1KAR_B.
Probab=95.70 E-value=3.5 Score=45.43 Aligned_cols=282 Identities=16% Similarity=0.187 Sum_probs=129.0
Q ss_pred HHHHHHHHHHHHhcccccccccccccccCCCeEEEEeecceeEEEEEcCC----CchhHHHHHHHHHHhCCE--EEEeCC
Q 005047 363 KISSLAKSIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES----RPDALVQIASLAIRSGNG--LLLKGG 436 (716)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~----~P~~~~~~~~~ALaaGNt--vv~Kps 436 (716)
-++.++++++.|....++..... ....+|.....++.|+--|++-.|- ||...++.+.||-.||.. |+.-|.
T Consensus 69 Ai~~A~~~I~~fh~~q~~~~~~~--~~~~~G~~~g~~~~Pi~rvG~YVPGG~a~~pStvlM~aiPA~vAGV~~Iv~~TPp 146 (412)
T PF00815_consen 69 AIEQAAENIRAFHEAQLPKKDWE--VETEPGVILGQRYRPIERVGLYVPGGRAPYPSTVLMTAIPAKVAGVKEIVVCTPP 146 (412)
T ss_dssp HHHHHHHHHHHHHHTT-----EE--EEEETTEEEEEEEEE-SEEEEE---SSS--THHHHHHHHHHHHHT-SEEEEEE-S
T ss_pred HHHHHHHHHHHHHHHhcCCCCcE--EEecCCcEEEEEEEEhhheEEEccCCCCCccHHHHHcccchhhcCCCeEEEEcCC
Confidence 45566666776654322211100 1112466677789999999999992 455566778899999964 555564
Q ss_pred cc----hHHHHHHHHHHHHHhcccccCcCceEEec-CCc-hHHHh-h--cCCCCccEEEeecCHHH--HHHHHHh-cCCC
Q 005047 437 KE----AMRSNAILHKVITSAIPDTVGEKLIGLVT-SRE-EIPDL-L--KLDDVIDLVIPRGSNKL--VSQIKES-TKIP 504 (716)
Q Consensus 437 ~~----tp~t~~~l~~l~~~al~~alP~gvv~vv~-~~~-~~~~~-l--~~~~~v~~v~fTGs~~~--g~~i~~~-a~~~ 504 (716)
.. .|.+- .-+.+ .|+=.+.. |+. .++++ . .+=|+||+|+==|..=+ +|+.... .++-
T Consensus 147 ~~~G~i~p~vL-~Aa~~----------~Gv~evy~vGGaqAIAAlAyGTeti~~VDkIvGPGN~yV~~AK~~v~g~V~ID 215 (412)
T PF00815_consen 147 PKDGKINPAVL-AAAHL----------AGVDEVYKVGGAQAIAALAYGTETIPKVDKIVGPGNAYVTAAKRLVFGDVGID 215 (412)
T ss_dssp S------HHHH-HHHHH----------TT-SEEEE--HHHHHHHHHH--SSS---SEEE---SHHHHHHHHHHHHS-EES
T ss_pred CccCCCCHHHH-HHHHH----------cCCCEEEecccHHHHHHHHcCCCCCCceeEEECCCcHHHHHHHHHhcCCcccC
Confidence 43 23221 11111 24445554 543 33322 1 12378999987776543 3333222 1111
Q ss_pred EEEecCCcc--eEEEcCCCCHHHHHHHHHHhcCCCCCccccccceEEEeCccCChhhHHHHHHHHHhcCCEEecCccccc
Q 005047 505 VLGHADGIC--HVYVDKSANLDVAKNIVIDAKIDYPAACNAMVETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASK 582 (716)
Q Consensus 505 ~~lElGGk~--p~iV~~dADl~~Aa~~iv~~~f~n~g~C~a~~~rv~V~~~i~dd~f~~~l~~~~~~~~~~~~g~~~~~~ 582 (716)
. +-|-+ -+|-|++||.+..+..++.-+=.... . .-++|..+ .++.+++.+++++.-..+ ++.
T Consensus 216 ~---~AGPSEv~ViAD~~A~p~~vAaDLLaQAEHd~~----a-~~vLvt~s---~~la~~V~~~v~~~l~~l---~r~-- 279 (412)
T PF00815_consen 216 M---IAGPSEVLVIADETANPEFVAADLLAQAEHDPD----A-QAVLVTTS---EELAEAVEAEVERQLEEL---PRR-- 279 (412)
T ss_dssp ---------EEEEEE-TTS-HHHHHHHHHHHHTT-TT------EEEEEES----HHHHHHHHHHHHHHHTT----TTH--
T ss_pred C---CCCCCceEEEECCCCCHHHHHHHHHHHhccCCC----C-ceEEEECC---HHHHHHHHHHHHHHHHhC---Cch--
Confidence 1 11222 24556789999988877764433322 0 22344333 355555555555320000 111
Q ss_pred cccCCCCccccccccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEccCHHHHHHHHHc-cCcceEEEcCCcCC------
Q 005047 583 LLQIPETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQ-VDSAAVFHNASTRF------ 655 (716)
Q Consensus 583 ~~pv~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~i~t~d~~~a~~~~~~-~~~G~v~vN~~~~~------ 655 (716)
.+. ++.+. --.++-++|++||++++|..- +=-..|.++|... +..+ -.+|.|++...++-
T Consensus 280 -------~i~-~~sl~-~g~ii~~~~l~ea~~~~N~~A-PEHLel~~~~~~~---~~~~i~~AGaiFlG~~tp~a~GDY~ 346 (412)
T PF00815_consen 280 -------EIA-EKSLE-NGAIIVVDSLEEAIELANEYA-PEHLELQVEDPEE---LLEKIRNAGAIFLGEYTPEALGDYA 346 (412)
T ss_dssp -------HHH-HHHHT-T-EEEE-SSHHHHHHHHHHH---SEEEEESTTHHH---HGGG--S-SEEEESTT--HHHHHHT
T ss_pred -------HHH-HHHHH-CCeEEEECCHHHHHHHHHHhh-HHHHHHHHcCHHH---HHHHhhccChhhcCCCCCHHHhhhc
Confidence 111 23333 334778999999999999976 3357788999854 4444 46899999976531
Q ss_pred -CCCCcccCcceeeccccccccccccchhcccEEEEEEE
Q 005047 656 -CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILR 693 (716)
Q Consensus 656 -~~~~p~g~g~~sG~~~~~~~~~g~~gl~~ft~~k~v~~ 693 (716)
.++.-++.+ |.. +..|..++..|.+.-++..
T Consensus 347 aGpNHvLPT~---G~A----R~~sgLsv~~FlK~~s~~~ 378 (412)
T PF00815_consen 347 AGPNHVLPTG---GTA----RFSSGLSVDDFLKRISVQR 378 (412)
T ss_dssp SSS------T---TGG----GT---S-GGGGEEEEEEEE
T ss_pred cCCCccCCCC---ccc----cccCCCcHHHccceeeEEE
Confidence 111111211 111 2235667888888766544
No 224
>cd06572 Histidinol_dh Histidinol dehydrogenase, HisD, E.C 1.1.1.23. Histidinol dehydrogenase catalyzes the last two steps in the L-histidine biosynthesis pathway, which is conserved in bacteria, archaea, fungi, and plants. These last two steps are (i) the NAD-dependent oxidation of L-histidinol to L-histidinaldehyde, and (ii) the NAD-dependent oxidation of L-histidinaldehyde to L-histidine. In most fungi and in the unicellular choanoflagellate Monosiga bevicollis, the HisD domain is fused with units that catalyze the second and third biosynthesis steps in this same pathway.
Probab=93.95 E-value=12 Score=41.13 Aligned_cols=283 Identities=15% Similarity=0.144 Sum_probs=149.6
Q ss_pred HHHHHHHHHHHHhcccccccccccccccCCCeEEEEeecceeEEEEEcCC----CchhHHHHHHHHHHhCCE--EEEeCC
Q 005047 363 KISSLAKSIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES----RPDALVQIASLAIRSGNG--LLLKGG 436 (716)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~----~P~~~~~~~~~ALaaGNt--vv~Kps 436 (716)
-++...++++.|.....+..... ...+|.....++.|+--|++-.|- ||...++.+.||-.||+. |+.-|.
T Consensus 56 ai~~A~~nI~~fh~~q~~~~~~~---~~~~G~~~g~~~~Pi~~vG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp 132 (390)
T cd06572 56 AIELAAENIRAFHEAQLPKDWEV---ETEPGVVLGQRYRPIERVGLYVPGGTAPYPSTVLMLAIPAKVAGVKEIVVVTPP 132 (390)
T ss_pred HHHHHHHHHHHHHHHhCCCCeEE---EeCCCcEEEEEEEehhEEEEEecCCCCcchHHHHHhhcchhhcCCCeEEEEeCc
Confidence 35555666666643222211111 112466777889999999999992 555556777899999975 455565
Q ss_pred c----chHHHHHHHHHHHHHhcccccCcCceEEec-CCchHHHhhc----CCCCccEEEeecCHHH--HHHHHHhcCCCE
Q 005047 437 K----EAMRSNAILHKVITSAIPDTVGEKLIGLVT-SREEIPDLLK----LDDVIDLVIPRGSNKL--VSQIKESTKIPV 505 (716)
Q Consensus 437 ~----~tp~t~~~l~~l~~~al~~alP~gvv~vv~-~~~~~~~~l~----~~~~v~~v~fTGs~~~--g~~i~~~a~~~~ 505 (716)
. -.|.+- ..+++ .|+=.+.. |+...-++|. +-|+||+|+=-|..=+ +|+....- .-+
T Consensus 133 ~~~g~i~p~iL-~aa~~----------~Gv~eiy~vGGaQAIAAlAyGTesi~~VDkIvGPGN~yV~~AK~~v~g~-V~I 200 (390)
T cd06572 133 RKDGKINPAIL-AAAKL----------AGVDEIYKVGGAQAIAALAYGTETIPKVDKIVGPGNIYVTAAKRLVSGD-VGI 200 (390)
T ss_pred CCCCCCCHHHH-HHHHH----------cCCcEEeccCCHHHHHHHHcCCcCCCCCCEeeCCchHHHHHHHHHhcCC-cCc
Confidence 3 233321 12222 24445555 5433323332 3688999987776543 23221110 111
Q ss_pred EEecCCcce-EEEcCCCCHHHHHHHHHHhcCCCCCccccccceEEEeCccCChhhHHHHHHHHHhcCCEEecCccccccc
Q 005047 506 LGHADGICH-VYVDKSANLDVAKNIVIDAKIDYPAACNAMVETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLL 584 (716)
Q Consensus 506 ~lElGGk~p-~iV~~dADl~~Aa~~iv~~~f~n~g~C~a~~~rv~V~~~i~dd~f~~~l~~~~~~~~~~~~g~~~~~~~~ 584 (716)
=+--|=..- +|-|++||.+..+..++.-+=.... . .-++|..+ .++.++..+++++.-..+ ++.
T Consensus 201 D~~AGPSEvlIiAD~~A~p~~vAaDLLaQAEH~~~----a-~aiLvT~s---~~la~~V~~~v~~ql~~l---~r~---- 265 (390)
T cd06572 201 DMPAGPSEVLVIADETANPEFVAADLLSQAEHDPD----S-QAILVTTS---EELAEAVEEEVERQLAEL---PRR---- 265 (390)
T ss_pred cCCCCCceEEEEeCCCCCHHHHHHHHHhhhccCCC----C-eEEEEECC---HHHHHHHHHHHHHHHHhC---CcH----
Confidence 111111222 4446679999988877754332211 1 23444333 355555555554321101 111
Q ss_pred cCCCCccccccccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEccCHHHHHHHHHccCcceEEEcCCcCC-------CC
Q 005047 585 QIPETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRF-------CD 657 (716)
Q Consensus 585 pv~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~i~t~d~~~a~~~~~~~~~G~v~vN~~~~~-------~~ 657 (716)
.+..+. ..---.|+-++|++||++++|..- +--.-|.++|... .+.+--.+|.|++-..++- .+
T Consensus 266 -----~~~~~~-~~~~g~ii~~~~~~eai~~~N~~A-PEHLel~~~~~~~--~l~~i~nAGsiFlG~~tp~a~GDY~aGp 336 (390)
T cd06572 266 -----EIAAKS-LLDYGAIILVDDLEEAIELANEYA-PEHLELQTEDPEE--LLEKIRNAGSIFLGPYTPEALGDYAAGP 336 (390)
T ss_pred -----HHHHHH-HHhCCEEEEECCHHHHHHHHHhhc-hhhheeHhcCHHH--HHhhCccceEEeecCCCchhhhccccCC
Confidence 111111 111223567899999999999976 3456788999865 2333457899999875431 11
Q ss_pred --CCcccCcceeeccccccccccccchhcccEEEEEEE
Q 005047 658 --GARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILR 693 (716)
Q Consensus 658 --~~p~g~g~~sG~~~~~~~~~g~~gl~~ft~~k~v~~ 693 (716)
-+|-+ |.. +..|..++..|.+.-++..
T Consensus 337 NHvLPT~-----G~A----r~~sgL~v~~F~K~~s~~~ 365 (390)
T cd06572 337 NHVLPTG-----GTA----RFYSGLSVDDFLKRITVQE 365 (390)
T ss_pred CCccCCC-----cce----eecCCCCHHHheecceeEE
Confidence 11222 211 2236677888887766543
No 225
>COG0141 HisD Histidinol dehydrogenase [Amino acid transport and metabolism]
Probab=93.67 E-value=3.8 Score=44.94 Aligned_cols=224 Identities=14% Similarity=0.179 Sum_probs=128.4
Q ss_pred CCeEEEEeecceeEEEEEcC----CCchhHHHHHHHHHHhCCE--EEEeCCcc---hHHHHHHHHHHHHHhcccccCcCc
Q 005047 392 DGLILEKTSCPLGVLLIVFE----SRPDALVQIASLAIRSGNG--LLLKGGKE---AMRSNAILHKVITSAIPDTVGEKL 462 (716)
Q Consensus 392 ~~~~~~~~~~PlGVv~~I~p----~~P~~~~~~~~~ALaaGNt--vv~Kps~~---tp~t~~~l~~l~~~al~~alP~gv 462 (716)
+|.....++.|+--|++-.| .||...++...||-.||+- |+.-|... .|.+ +..++++ |+
T Consensus 106 ~Gv~~g~~~~Pi~~VGlYVPGG~A~ypStvLM~avPAkvAGv~~Iv~~tPp~~~gv~p~i-L~AA~~~----------Gv 174 (425)
T COG0141 106 PGVVLGQRWRPIERVGLYVPGGKAAYPSTVLMNAVPAKVAGVEEIVVVTPPPKDGVNPEI-LAAARLA----------GV 174 (425)
T ss_pred CCcEEEEEEEEhhheEEEccCCCcCChHHHHHhhccHhhcCCceEEEECCCCCCCCCHHH-HHHHHHh----------Cc
Confidence 56667778899999999999 2676666677799999985 44555553 3332 1122222 22
Q ss_pred eEEec-CCchHHHhhcCC----CCccEEEeecCHHH--HHHHHHhcCCCEEEecCCcce-EEEcCCCCHHHHHHHHHHhc
Q 005047 463 IGLVT-SREEIPDLLKLD----DVIDLVIPRGSNKL--VSQIKESTKIPVLGHADGICH-VYVDKSANLDVAKNIVIDAK 534 (716)
Q Consensus 463 v~vv~-~~~~~~~~l~~~----~~v~~v~fTGs~~~--g~~i~~~a~~~~~lElGGk~p-~iV~~dADl~~Aa~~iv~~~ 534 (716)
=.+.. |+...-++|.-. |.||+|+==|..=+ +|..... ..-+=+..|=..- +|-|++||.+..+..++.-+
T Consensus 175 ~eIy~vGGAQAIAAlAYGTetV~~VdkIvGPGN~yVtaAKr~v~g-~V~ID~~AGPSEvlViAD~ta~p~~vA~DLLsQA 253 (425)
T COG0141 175 DEVYKVGGAQAIAALAYGTETVPKVDKIVGPGNAYVTAAKRLVSG-VVGIDMIAGPSEVLVIADETANPDFVAADLLSQA 253 (425)
T ss_pred HHHHHccCHHHHHHHHccCCcCCccCeeeCCCcHHHHHHHHHhhC-CcccCCCCCCceEEEEeCCCCCHHHHHHHHHHHh
Confidence 23333 543333344332 78999987776643 2332221 1111122222222 34456699999888777644
Q ss_pred CCCCCccccccceEEEeCccCChhhHHHHHHHHHhcCCEEecCccccccccCCCCccccc--cccCceEEEEEeCCHHHH
Q 005047 535 IDYPAACNAMVETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLQIPETRLFHH--EYNSMVCTVEIVDDVRAA 612 (716)
Q Consensus 535 f~n~g~C~a~~~rv~V~~~i~dd~f~~~l~~~~~~~~~~~~g~~~~~~~~pv~~~~~~~e--E~FGPVl~v~~~~~~deA 612 (716)
=.... . +-++|..| ++|.++..+++.+.-..+ ++. ++..+ +-|| .|+-++|+|||
T Consensus 254 EHd~~----a-~aiLvT~s---~~la~~v~~~v~~~l~~l---~~~---------ei~~~~l~~~g---~iilv~~l~ea 310 (425)
T COG0141 254 EHDPD----A-QAILVTDS---EELAEAVEAAVERQLETL---PRA---------EIARKALENYG---AIILVDDLDEA 310 (425)
T ss_pred hcCCC----c-eEEEEeCc---HHHHHHHHHHHHHHHHhc---cHH---------HHHHHHHHhCC---eEEEECCHHHH
Confidence 33211 1 34556544 466666665555421111 110 01111 1233 46778999999
Q ss_pred HHHHHhcCCCceeEEEccCHHHHHHHHHc-cCcceEEEcCCcC
Q 005047 613 IDHIHQHGSAHTDCIVAEDQKVAETFLCQ-VDSAAVFHNASTR 654 (716)
Q Consensus 613 i~~aN~~~~GL~a~i~t~d~~~a~~~~~~-~~~G~v~vN~~~~ 654 (716)
++++|... +--.-|.++|... +..+ -++|.|++...++
T Consensus 311 ~~~~N~~A-PEHLei~~~~p~~---~l~~I~nAGsIFlG~~sP 349 (425)
T COG0141 311 VEISNEYA-PEHLELQTENPRE---LLGKIRNAGSIFLGHYSP 349 (425)
T ss_pred HHHHHhhC-hHhhhhhhcCHHH---HHHHhcccceeeecCCCC
Confidence 99999976 3456788999865 3333 4689999998654
No 226
>TIGR00069 hisD histidinol dehydrogenase. This model describes a polypeptide sequence catalyzing the final step in histidine biosynthesis, found sometimes as an independent protein and sometimes as a part of a multifunctional protein.
Probab=93.40 E-value=14 Score=40.57 Aligned_cols=254 Identities=16% Similarity=0.180 Sum_probs=136.9
Q ss_pred CCeEEEEeecceeEEEEEcCC----CchhHHHHHHHHHHhCCE--EEEeCCc----chHHHHHHHHHHHHHhcccccCcC
Q 005047 392 DGLILEKTSCPLGVLLIVFES----RPDALVQIASLAIRSGNG--LLLKGGK----EAMRSNAILHKVITSAIPDTVGEK 461 (716)
Q Consensus 392 ~~~~~~~~~~PlGVv~~I~p~----~P~~~~~~~~~ALaaGNt--vv~Kps~----~tp~t~~~l~~l~~~al~~alP~g 461 (716)
+|.....++.|+--|++-.|. ||...++...||-.||+. |+.-|.. -.|.+-. .+++ .|
T Consensus 78 ~Gv~~g~~~~Pi~rvGlYVPGG~a~~pStvLM~aiPAkvAGV~~Iv~~TPp~~~g~i~p~iL~-AA~~----------~G 146 (393)
T TIGR00069 78 PGVILGQRVRPLERVGLYVPGGRAPYPSTVLMTAIPAKVAGVKEIVVCTPPGKDGKINPAVLA-AAKL----------AG 146 (393)
T ss_pred CCeEEEEEEEEeheEEEEeCCCCCcchHHHHHhhcchhhcCCCeEEEEeCCCcCCCCCHHHHH-HHHH----------cC
Confidence 466667788999999999994 555556677799999975 4455553 2333321 1222 24
Q ss_pred ceEEec-CCchHHHhh----cCCCCccEEEeecCHHH--HHHHHHh-cCCCEEEecCCcc--eEEEcCCCCHHHHHHHHH
Q 005047 462 LIGLVT-SREEIPDLL----KLDDVIDLVIPRGSNKL--VSQIKES-TKIPVLGHADGIC--HVYVDKSANLDVAKNIVI 531 (716)
Q Consensus 462 vv~vv~-~~~~~~~~l----~~~~~v~~v~fTGs~~~--g~~i~~~-a~~~~~lElGGk~--p~iV~~dADl~~Aa~~iv 531 (716)
+=.+.. |+...-++| .+=|+||+|+=-|..=+ +|+.... .++-. +-|-+ -+|-|++||.+..+..++
T Consensus 147 v~eIy~vGGAQAIAAlAyGTesIp~VDkIvGPGN~yV~~AK~~v~g~V~ID~---~AGPSEvlViAD~~Anp~~iAaDLL 223 (393)
T TIGR00069 147 VDEVYKVGGAQAIAALAYGTETVPKVDKIVGPGNIYVTAAKKLVFGDVGIDM---PAGPSEVLVIADETANPEFVAADLL 223 (393)
T ss_pred CCeehhcCCHHHHHHHHcCCCCCCCCcEEECCCcHHHHHHHHHhcCccCcCC---CCCCceEEEEeCCCCCHHHHHHHHH
Confidence 444554 543322222 23478999987776543 3332111 11111 11222 244466799999888877
Q ss_pred HhcCCCCCccccccceEEEeCccCChhhHHHHHHHHHhcCCEEecCccccccccCCCCccccccc--cCceEEEEEeCCH
Q 005047 532 DAKIDYPAACNAMVETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLQIPETRLFHHEY--NSMVCTVEIVDDV 609 (716)
Q Consensus 532 ~~~f~n~g~C~a~~~rv~V~~~i~dd~f~~~l~~~~~~~~~~~~g~~~~~~~~pv~~~~~~~eE~--FGPVl~v~~~~~~ 609 (716)
.-+=.... . +-++|..+ .++.++..+++++.-..+ ++. .+.++-+ +|= |+-++|+
T Consensus 224 aQAEHd~~----a-~~iLvT~s---~~la~~V~~~v~~ql~~l---~r~---------~i~~~al~~~g~---ii~v~~l 280 (393)
T TIGR00069 224 SQAEHDPD----A-QAILVTTS---EELAEAVQEEIERQLATL---PRR---------EIARKSLEDNGA---IILVDDL 280 (393)
T ss_pred HHhccCCC----C-cEEEEECC---HHHHHHHHHHHHHHHHhC---ChH---------HHHHHHHHhCCE---EEEECCH
Confidence 64433221 1 23444332 345555544444321000 111 1221111 343 4678999
Q ss_pred HHHHHHHHhcCCCceeEEEccCHHHHHHHHHc-cCcceEEEcCCcCC--C-----CCCcccCcceeeccccccccccccc
Q 005047 610 RAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQ-VDSAAVFHNASTRF--C-----DGARFGLGAEVGISTSRIHARGPVG 681 (716)
Q Consensus 610 deAi~~aN~~~~GL~a~i~t~d~~~a~~~~~~-~~~G~v~vN~~~~~--~-----~~~p~g~g~~sG~~~~~~~~~g~~g 681 (716)
|||++++|..-- --.-|.++|... +..+ -.+|.|++-..++- . ++.-++.+ |.. +..+..+
T Consensus 281 ~ea~~~~N~~AP-EHLel~~~~p~~---~l~~I~nAGaiFlG~~tp~a~GDY~aG~NHvLPT~---G~A----r~~sgL~ 349 (393)
T TIGR00069 281 EEAIEISNDYAP-EHLELQTKNPEE---LLPKIRNAGSIFLGPYTPEAAGDYAAGPNHVLPTG---GTA----RFYSGLS 349 (393)
T ss_pred HHHHHHHHhhCh-HhheehhCCHHH---HHhhcCccceeccCCCCchhhhhccCCCCcccCCC---cce----eecCCcc
Confidence 999999999753 335588888754 3433 46899999765431 1 11111111 111 2235667
Q ss_pred hhcccEEEEEEE
Q 005047 682 VEGLLTTRWILR 693 (716)
Q Consensus 682 l~~ft~~k~v~~ 693 (716)
+..|.+.-++..
T Consensus 350 v~~F~K~~s~~~ 361 (393)
T TIGR00069 350 VLDFLKRITVQR 361 (393)
T ss_pred HHHhccceeEEE
Confidence 888877766543
No 227
>PRK13770 histidinol dehydrogenase; Provisional
Probab=93.35 E-value=15 Score=40.49 Aligned_cols=278 Identities=12% Similarity=0.110 Sum_probs=143.8
Q ss_pred HHHHHHHHHHHHhcccccccccccccccCCCeEEEEeecceeEEEEEcCC----CchhHHHHHHHHHHhCCEE--EEeCC
Q 005047 363 KISSLAKSIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES----RPDALVQIASLAIRSGNGL--LLKGG 436 (716)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~----~P~~~~~~~~~ALaaGNtv--v~Kps 436 (716)
-++...++++.|-....+.. +....+.....++.|+--|++-.|- ||...+..+.||-.||+.= +.-|.
T Consensus 76 ai~~A~~nI~~fh~~q~~~~-----~~~~~gv~~g~~~~Pi~rvGlYVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp 150 (416)
T PRK13770 76 ALQQSYERIKAYQESIKQTN-----QQLEESVECYEIYHPLESVGIYVPGGKASYPSTVLMTATLAQVAGVENIVVVTPP 150 (416)
T ss_pred HHHHHHHHHHHHHHHhCCCC-----eEecCCcEEEEEEeeeeeeEEEccCCCCCccHHHHHhhccHhhcCCCeEEEEeCc
Confidence 45555666666543211111 1112455666788999999999993 5655667778999999864 44454
Q ss_pred cc---hHHHHHHHHHHHHHhcccccCcCceEEec-CCchHHHhh----cCCCCccEEEeecCHHH--HHHHHHh-cCCCE
Q 005047 437 KE---AMRSNAILHKVITSAIPDTVGEKLIGLVT-SREEIPDLL----KLDDVIDLVIPRGSNKL--VSQIKES-TKIPV 505 (716)
Q Consensus 437 ~~---tp~t~~~l~~l~~~al~~alP~gvv~vv~-~~~~~~~~l----~~~~~v~~v~fTGs~~~--g~~i~~~-a~~~~ 505 (716)
.. .|.+- ..+++ .|+=.+.. |+...-++| .+=|+||+|+==|..=+ +|+.... .++-.
T Consensus 151 ~~~~i~p~iL-~Aa~~----------~Gv~eIy~iGGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~g~V~ID~ 219 (416)
T PRK13770 151 QPNGVSQEVL-AACYI----------TQVNQVFQVGGAQSIAALTYGTETIPKVDKIVGPGNQFVAYAKKYLFGQVGIDQ 219 (416)
T ss_pred CCCCCCHHHH-HHHHH----------cCCCeeeccCCHHHHHHHHcCCCCCCCCcEEECCCcHHHHHHHHHhcCCcCcCC
Confidence 32 33332 12222 24444444 543322222 23578999986665533 2332111 11111
Q ss_pred EEecCCcc--eEEEcCCCCHHHHHHHHHHhcCCCCCccccccceEEEeCccCChhhHHHHHHHHHhcCCEEecCcccccc
Q 005047 506 LGHADGIC--HVYVDKSANLDVAKNIVIDAKIDYPAACNAMVETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKL 583 (716)
Q Consensus 506 ~lElGGk~--p~iV~~dADl~~Aa~~iv~~~f~n~g~C~a~~~rv~V~~~i~dd~f~~~l~~~~~~~~~~~~g~~~~~~~ 583 (716)
+-|-+ -+|-|++||.+..+..++.-+=.... . .-++|..+ .++.+++.+++++.-..+ ++.
T Consensus 220 ---~AGPSEvlViAD~~Anp~~iAaDLLaQAEHd~~----a-~~iLvT~s---~~la~~V~~ev~~ql~~l---pr~--- 282 (416)
T PRK13770 220 ---IAGPTEIALIIDETADLDAIVYDVFAQAEHDEL----A-RTYVISED---AQVLKDLESRIAKALPNV---DRY--- 282 (416)
T ss_pred ---CCCCceeEEEecCCCCHHHHHHHHHHHhccCCC----C-cEEEEeCC---HHHHHHHHHHHHHHHHhC---ChH---
Confidence 11222 24446679999988887764433211 0 22333222 234444444443210000 110
Q ss_pred ccCCCCccccc--cccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEccCHHHHHHHHHc-cCcceEEEcCCcCC--C--
Q 005047 584 LQIPETRLFHH--EYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQ-VDSAAVFHNASTRF--C-- 656 (716)
Q Consensus 584 ~pv~~~~~~~e--E~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~i~t~d~~~a~~~~~~-~~~G~v~vN~~~~~--~-- 656 (716)
.+.++ |-|| .|+-++|+|||++++|.--.= -.-|.++|... +..+ -.+|.|++-..++- .
T Consensus 283 ------~i~~~al~~~g---~ii~v~~~eeai~~~N~~APE-HLel~~~~~~~---~l~~i~nAGaiFlG~~sp~a~GDY 349 (416)
T PRK13770 283 ------DIVSKSIANQH---YLIHASNFDEACHVMNTIAPE-HASIQTVNPQP---YIEKVKYVGALFIGHYSPEVIGDY 349 (416)
T ss_pred ------HHHHHHHHhCC---EEEEECCHHHHHHHHHhhChH-hheehhCCHHH---HHhhCCEeceeccCCCCchhhhcc
Confidence 11111 1233 346789999999999997633 34588999854 4444 46899999765431 1
Q ss_pred ---CCCcccCcceeeccccccccccccchhcccEEEEEEE
Q 005047 657 ---DGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILR 693 (716)
Q Consensus 657 ---~~~p~g~g~~sG~~~~~~~~~g~~gl~~ft~~k~v~~ 693 (716)
++.-++.+ |.. +..|.-++..|.+.-++..
T Consensus 350 ~aGpNHvLPT~---G~A----R~~sgLsv~~FlK~~s~~~ 382 (416)
T PRK13770 350 VAGPSHVLPTN---RTA----RFTNGLSVNDFLTRNTVIH 382 (416)
T ss_pred ccCCCCcCCCC---cce----eccCCCcHHHeecceeeEE
Confidence 11111111 111 2235667888887766543
No 228
>PRK12447 histidinol dehydrogenase; Reviewed
Probab=92.69 E-value=14 Score=40.89 Aligned_cols=253 Identities=14% Similarity=0.123 Sum_probs=135.8
Q ss_pred CCeEEEEeecceeEEEEEcCC----CchhHHHHHHHHHHhCCE--EEEeCCcc---hHHHHHHHHHHHHHhcccccCcCc
Q 005047 392 DGLILEKTSCPLGVLLIVFES----RPDALVQIASLAIRSGNG--LLLKGGKE---AMRSNAILHKVITSAIPDTVGEKL 462 (716)
Q Consensus 392 ~~~~~~~~~~PlGVv~~I~p~----~P~~~~~~~~~ALaaGNt--vv~Kps~~---tp~t~~~l~~l~~~al~~alP~gv 462 (716)
+|.....++.|+--|++-.|- ||...+..+.||-.||+. |+.-|... .|.+- ..+++ .|+
T Consensus 105 ~Gv~~g~~~~Pl~rvG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp~~~~i~p~iL-~Aa~~----------~Gv 173 (426)
T PRK12447 105 PGVILGHRNIPVNSVGCYVPGGRYPLVASAHMSVLTAKVAGVKRVIACTPPFPGEPPPAIV-AAMHL----------AGA 173 (426)
T ss_pred CCeEEEEEEeehheEEEEeCCCCCcchHHHHHhhcchhhcCCCeEEEEeCCCCCCCCHHHH-HHHHH----------cCC
Confidence 456667788999999999992 565556777899999975 44555532 23221 11222 244
Q ss_pred eEEec-CCchHHHhh----cCCCCccEEEeecCHHH--HHHHHHh-cCCCEEEecCCcce--EEEcCCCCHHHHHHHHHH
Q 005047 463 IGLVT-SREEIPDLL----KLDDVIDLVIPRGSNKL--VSQIKES-TKIPVLGHADGICH--VYVDKSANLDVAKNIVID 532 (716)
Q Consensus 463 v~vv~-~~~~~~~~l----~~~~~v~~v~fTGs~~~--g~~i~~~-a~~~~~lElGGk~p--~iV~~dADl~~Aa~~iv~ 532 (716)
=.+.. |+...-++| .+=|+||+|+=-|..=+ +|+.... .++-.+ -|-+= +|-|++||.+..+..++.
T Consensus 174 ~eIy~vGGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~g~V~ID~~---AGPSEvlViAD~~Anp~~vAaDLLa 250 (426)
T PRK12447 174 DEIYVLGGVQAVAAMAYGTETIKPVDMLVGPGNAYVAEAKRQLFGRVGIDLF---AGPTETLVIADDTADPELVATDLLG 250 (426)
T ss_pred CeehhcCCHHHHHHHHcCCCCCCCCcEEECCCcHHHHHHHHHhcCccCcCCC---CCCceeEEEeCCCCCHHHHHHHHHH
Confidence 44554 543322222 23478999987776643 3332111 111111 12222 344567999998887776
Q ss_pred hcCCCCCccccccceEEEeCccCChhhHHHHHHHHHhcCCEEecCccccccccCCCCccccc--cccCceEEEEEeCCHH
Q 005047 533 AKIDYPAACNAMVETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLQIPETRLFHH--EYNSMVCTVEIVDDVR 610 (716)
Q Consensus 533 ~~f~n~g~C~a~~~rv~V~~~i~dd~f~~~l~~~~~~~~~~~~g~~~~~~~~pv~~~~~~~e--E~FGPVl~v~~~~~~d 610 (716)
-+=+... . .-++|..+ .++.+++.+++++.-..+ ++. .+.++ |-+|= |+-++|+|
T Consensus 251 QAEHd~~----a-~~iLvT~s---~~la~~V~~~v~~ql~~l---~r~---------~i~~~sl~~~g~---ii~v~~l~ 307 (426)
T PRK12447 251 QAEHGPN----S-PAVLITTS---RKLAEEVLAEIERLLAIL---PTA---------DVASAAWRDYGE---VILCDDLE 307 (426)
T ss_pred HhccCCC----C-ceEEEECC---HHHHHHHHHHHHHHHHhC---CHH---------HHHHHHHHhCCE---EEEECCHH
Confidence 4433221 1 22344332 345555555444320001 111 11111 12343 46789999
Q ss_pred HHHHHHHhcCCCceeEEEccCHHHHHHHHHc-cCcceEEEcCCcCC--C-----CCCcccCcceeeccccccccccccch
Q 005047 611 AAIDHIHQHGSAHTDCIVAEDQKVAETFLCQ-VDSAAVFHNASTRF--C-----DGARFGLGAEVGISTSRIHARGPVGV 682 (716)
Q Consensus 611 eAi~~aN~~~~GL~a~i~t~d~~~a~~~~~~-~~~G~v~vN~~~~~--~-----~~~p~g~g~~sG~~~~~~~~~g~~gl 682 (716)
||++++|..-- =-..|.++|... +..+ -.+|.|++-..++- . ++.-++. +|.. +..|..++
T Consensus 308 ea~~~~N~~AP-EHLel~~~~~~~---~l~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT---~G~A----r~~sgLsv 376 (426)
T PRK12447 308 EMVAEADRYAS-EHVQVMTEDPDW---FLENMTNYGALFLGERTNVAYGDKVIGTNHVLPT---SGAA----RYTGGLWV 376 (426)
T ss_pred HHHHHHHhhCh-HheeehhCCHHH---HHhhcCccceeccCCCCchhhhhcccCCCcccCC---Ccce----eecCCCcH
Confidence 99999999753 235688898854 4443 46899999764431 1 1111111 1211 22366678
Q ss_pred hcccEEEEEE
Q 005047 683 EGLLTTRWIL 692 (716)
Q Consensus 683 ~~ft~~k~v~ 692 (716)
..|.+.-++.
T Consensus 377 ~~FlK~~s~~ 386 (426)
T PRK12447 377 GKFLKTVTYQ 386 (426)
T ss_pred HHhccceeEE
Confidence 8887766553
No 229
>PLN02926 histidinol dehydrogenase
Probab=91.24 E-value=28 Score=38.70 Aligned_cols=257 Identities=15% Similarity=0.136 Sum_probs=138.7
Q ss_pred CCeEEEEeecceeEEEEEcCC----CchhHHHHHHHHHHhCCE--EEEeCCcc----hHHHHHHHHHHHHHhcccccCcC
Q 005047 392 DGLILEKTSCPLGVLLIVFES----RPDALVQIASLAIRSGNG--LLLKGGKE----AMRSNAILHKVITSAIPDTVGEK 461 (716)
Q Consensus 392 ~~~~~~~~~~PlGVv~~I~p~----~P~~~~~~~~~ALaaGNt--vv~Kps~~----tp~t~~~l~~l~~~al~~alP~g 461 (716)
+|.....++.|+.-|++-.|. ||...++.+.||-.||+. |+.-|... .|.+-. -+++ .|
T Consensus 110 ~Gv~~g~~~~Pi~rvG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp~~~g~i~p~iL~-AA~~----------~G 178 (431)
T PLN02926 110 PGVRCRRVARPIGAVGLYVPGGTAVLPSTALMLAVPAQIAGCKTVVLATPPRKDGSICPEVLY-CAKK----------AG 178 (431)
T ss_pred CCeEEEEEEechHHeeEeccCCCCCccHHHHHhhcchhhcCCCeEEEEECCCcCCCCCHHHHH-HHHH----------cC
Confidence 466667788999999999994 555566777899999975 55556532 333211 1222 24
Q ss_pred ceEEec-CCchHHHhh----cCCCCccEEEeecCHHH--HHHHHHhcCCC--EEEe-cCCcce--EEEcCCCCHHHHHHH
Q 005047 462 LIGLVT-SREEIPDLL----KLDDVIDLVIPRGSNKL--VSQIKESTKIP--VLGH-ADGICH--VYVDKSANLDVAKNI 529 (716)
Q Consensus 462 vv~vv~-~~~~~~~~l----~~~~~v~~v~fTGs~~~--g~~i~~~a~~~--~~lE-lGGk~p--~iV~~dADl~~Aa~~ 529 (716)
+=.+.. |+...-++| .+=|+||+|+=-|..=+ +|+... +.+ |-.. +-|-+= +|-|++||.+.++..
T Consensus 179 v~eIy~vGGaQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~--G~~~~VgID~~AGPSEvlIiAD~tA~p~~vAaD 256 (431)
T PLN02926 179 VTHILKAGGAQAIAAMAWGTDSCPKVDKIFGPGNQYVTAAKMILQ--NSEAMVSIDMPAGPSEVLVIADKTANPVHVAAD 256 (431)
T ss_pred CCeeeccCCHHHHHHHHcCCCCCCCCCEEECCCcHHHHHHHHHhh--CCCCccccCCCCCCceeEEEeCCCCCHHHHHHH
Confidence 445554 543322222 23478999987776543 333211 111 1111 112222 344566999998888
Q ss_pred HHHhcCCCCCccccccceEEEeCccCChhhHHHHHHHHHhcCCEEecCccccccccCCCCccccccccCceEEEEEeCCH
Q 005047 530 VIDAKIDYPAACNAMVETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLQIPETRLFHHEYNSMVCTVEIVDDV 609 (716)
Q Consensus 530 iv~~~f~n~g~C~a~~~rv~V~~~i~dd~f~~~l~~~~~~~~~~~~g~~~~~~~~pv~~~~~~~eE~FGPVl~v~~~~~~ 609 (716)
++.-+=+... . .-++|..+ .++.+++.+++++.-..+ ++. .+. ++.+.- -.|+-++|+
T Consensus 257 LLaQAEHdp~----a-~aiLvT~s---~~la~~V~~~v~~ql~~l---~r~---------~i~-~~sl~~-g~iivv~~l 314 (431)
T PLN02926 257 LLSQAEHGPD----S-QVVLVAVG---DVDLDAIEEEVEKQCQSL---PRG---------EIA-SKALGH-SFIVVARDM 314 (431)
T ss_pred HHHHhccCCC----C-cEEEEECC---HHHHHHHHHHHHHHHHhC---ChH---------HHH-HHHHHC-CEEEEECCH
Confidence 7764433221 1 23444333 345555544444320000 111 121 222233 456889999
Q ss_pred HHHHHHHHhcCCCceeEEEccCHHHHHHHHHccCcceEEEcCCcCC--C-----CCCcccCcceeeccccccccccccch
Q 005047 610 RAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRF--C-----DGARFGLGAEVGISTSRIHARGPVGV 682 (716)
Q Consensus 610 deAi~~aN~~~~GL~a~i~t~d~~~a~~~~~~~~~G~v~vN~~~~~--~-----~~~p~g~g~~sG~~~~~~~~~g~~gl 682 (716)
|||++++|..-- --..|.++|.... +.+--.+|.|++-..++. . ++.-++.+ |. .+..|..++
T Consensus 315 ~ea~~~~N~~AP-EHLei~~~~~~~~--l~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT~---G~----AR~~sgLsv 384 (431)
T PLN02926 315 AEAISFSNLYAP-EHLIVNVEDAESW--LDKIDNAGSVFLGRWTPESVGDYASGTNHVLPTY---GY----ARMYGGVSL 384 (431)
T ss_pred HHHHHHHHhhCh-HhheehhcCHHHH--HhhcCccceeccCCCCchhhhccccCcCcccCCC---cc----eeecCCCcH
Confidence 999999999753 3355889998543 233346899999764431 1 11111111 11 123466778
Q ss_pred hcccEEEEEEE
Q 005047 683 EGLLTTRWILR 693 (716)
Q Consensus 683 ~~ft~~k~v~~ 693 (716)
..|.+.-++..
T Consensus 385 ~~FlK~~s~~~ 395 (431)
T PLN02926 385 DSFLKYMTVQS 395 (431)
T ss_pred HHhcceeeEEE
Confidence 88887666543
No 230
>PRK00877 hisD bifunctional histidinal dehydrogenase/ histidinol dehydrogenase; Reviewed
Probab=90.79 E-value=31 Score=38.37 Aligned_cols=281 Identities=16% Similarity=0.175 Sum_probs=147.7
Q ss_pred HHHHHHHHHHHHhcccccccccccccccCCCeEEEEeecceeEEEEEcCC----CchhHHHHHHHHHHhCCE--EEEeCC
Q 005047 363 KISSLAKSIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES----RPDALVQIASLAIRSGNG--LLLKGG 436 (716)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~----~P~~~~~~~~~ALaaGNt--vv~Kps 436 (716)
-++...++++.|-....+..... ...+|...-.++.|+--|++-.|. ||...+....||-.||+. |+.-|.
T Consensus 84 ai~~A~~~I~~Fh~~q~~~~~~~---~~~~Gv~~g~~~~Pi~~vG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp 160 (425)
T PRK00877 84 ALEEAAENIRAFHEAQKPESWDV---ETAPGVRLGQRWRPIERVGLYVPGGKAAYPSSVLMNAIPAKVAGVKEIVMVTPP 160 (425)
T ss_pred HHHHHHHHHHHHHHHhCCCCeEE---EecCCeEEEEEEEehHHeEEEccCCCCCchHHHHHhhcchhhcCCCeEEEEeCC
Confidence 45555666666643222211111 012456666788999999999993 565566777899999975 555565
Q ss_pred c---chHHHHHHHHHHHHHhcccccCcCceEEec-CCchHHHhh----cCCCCccEEEeecCHHH--HHHHHHh-cCCCE
Q 005047 437 K---EAMRSNAILHKVITSAIPDTVGEKLIGLVT-SREEIPDLL----KLDDVIDLVIPRGSNKL--VSQIKES-TKIPV 505 (716)
Q Consensus 437 ~---~tp~t~~~l~~l~~~al~~alP~gvv~vv~-~~~~~~~~l----~~~~~v~~v~fTGs~~~--g~~i~~~-a~~~~ 505 (716)
. -.|.+-. .+++ .|+=.+.. |+...-++| .+=|+||+|+=-|..=+ +|+.... .++-.
T Consensus 161 ~~g~i~p~vL~-AA~~----------~Gv~eIy~vGGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~g~V~ID~ 229 (425)
T PRK00877 161 PDGEINPAILA-AAAL----------AGVDEVYKVGGAQAIAALAYGTESIPKVDKIVGPGNIYVTAAKRLVFGVVGIDM 229 (425)
T ss_pred CCCCCCHHHHH-HHHH----------cCCCeeeccCCHHHHHHHHcCCCCCCCCcEEECCCcHHHHHHHHHHcCCcCcCC
Confidence 3 2333211 1222 24444544 543322222 23478999987776543 3333221 11111
Q ss_pred EEecCCcce--EEEcCCCCHHHHHHHHHHhcCCCCCccccccceEEEeCccCChhhHHHHHHHHHhcCCEEecCcccccc
Q 005047 506 LGHADGICH--VYVDKSANLDVAKNIVIDAKIDYPAACNAMVETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKL 583 (716)
Q Consensus 506 ~lElGGk~p--~iV~~dADl~~Aa~~iv~~~f~n~g~C~a~~~rv~V~~~i~dd~f~~~l~~~~~~~~~~~~g~~~~~~~ 583 (716)
+-|-+= +|-|++||.+..+..++.-+=+... . +-++|..+ .++.++..+++++.-..+ ++.
T Consensus 230 ---~AGPSEvlViAD~~Anp~~vAaDLLaQAEHd~~----a-~aiLvT~s---~~la~~V~~~v~~ql~~l---~r~--- 292 (425)
T PRK00877 230 ---IAGPSEILVIADETADPDFVAADLLSQAEHDPD----A-QSILVTTS---EELAEAVAAEVERQLATL---PRA--- 292 (425)
T ss_pred ---CCCCceeEEEeCCCCCHHHHHHHHHHHhccCCC----C-cEEEEECC---HHHHHHHHHHHHHHHHhC---ChH---
Confidence 112222 3445669999988887764433221 1 22344332 345555544444321000 110
Q ss_pred ccCCCCccccc--cccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEccCHHHHHHHHHccCcceEEEcCCcCC------
Q 005047 584 LQIPETRLFHH--EYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRF------ 655 (716)
Q Consensus 584 ~pv~~~~~~~e--E~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~i~t~d~~~a~~~~~~~~~G~v~vN~~~~~------ 655 (716)
.+.++ |-||= |+-++|+|||++++|..-- =-..|.++|.... +.+--.+|.|++-..++-
T Consensus 293 ------~ia~~sl~~~g~---iivv~~leeai~~~N~~AP-EHLel~~~~p~~~--l~~I~nAGaiFlG~~tp~a~GDY~ 360 (425)
T PRK00877 293 ------EIARASLEGQGA---IILVDDLEEAIELSNAYAP-EHLEIQTEDPRAL--LDRIRNAGAIFLGPYTPESLGDYA 360 (425)
T ss_pred ------HHHHHHHHhCCE---EEEECCHHHHHHHHHhhCh-HheeehhCCHHHH--HhhcCccceeccCCCCchhhhhcc
Confidence 11111 11453 4678999999999999753 3456889998542 233357899999765431
Q ss_pred -CCCCcccCcceeeccccccccccccchhcccEEEEEEE
Q 005047 656 -CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILR 693 (716)
Q Consensus 656 -~~~~p~g~g~~sG~~~~~~~~~g~~gl~~ft~~k~v~~ 693 (716)
.++.-++. +|.. +..|.-++..|...-++..
T Consensus 361 aGpNHvLPT---~G~A----R~~sgLsV~~F~K~~s~~~ 392 (425)
T PRK00877 361 AGPNHVLPT---SGTA----RFSSGLSVYDFLKRSSVIE 392 (425)
T ss_pred cCCCcccCC---Ccce----eecCCccHHHhccceeEEE
Confidence 11111121 1211 2346678888887766543
No 231
>PRK13769 histidinol dehydrogenase; Provisional
Probab=89.49 E-value=36 Score=37.11 Aligned_cols=213 Identities=14% Similarity=0.049 Sum_probs=119.2
Q ss_pred CCeEEEEeecceeEEEEEcCC-CchhHHHHHHHHHHhCCEEEE--eCCc-chHHHHHHHHHHHHHhcccccCcCceEEec
Q 005047 392 DGLILEKTSCPLGVLLIVFES-RPDALVQIASLAIRSGNGLLL--KGGK-EAMRSNAILHKVITSAIPDTVGEKLIGLVT 467 (716)
Q Consensus 392 ~~~~~~~~~~PlGVv~~I~p~-~P~~~~~~~~~ALaaGNtvv~--Kps~-~tp~t~~~l~~l~~~al~~alP~gvv~vv~ 467 (716)
+|.....++.|+--|++-.|. ||...+..+.||-.||+.=|+ -|.. -.|.+ +..+++ .|+=.+..
T Consensus 83 ~Gv~~g~~~~Pi~rvG~YVPa~~pStvLM~~iPAkvAGV~~Iv~~TPp~~i~p~v-L~aa~~----------~Gv~eIy~ 151 (368)
T PRK13769 83 GGVLRSVFWKPVRRAALYVPARYVSTLVMLAVPARAAGVEEIYVVTPPRGVTGEL-LAVAKE----------LGVKGVLA 151 (368)
T ss_pred CCeEEEEEEeeeeeeEEEeccchHHHHHHhhccHhhcCCCeEEEeCCCCCCCHHH-HHHHHH----------cCCCeeec
Confidence 566667788999999999995 565566777899999986444 4442 22322 111222 24445554
Q ss_pred -CCchHHHhhcCCCCccEEEeecCHHH--HHHHHHh-cCCCEEEecCCcceEEEcCCCCHHHHHHHHHHhcCCCCCcccc
Q 005047 468 -SREEIPDLLKLDDVIDLVIPRGSNKL--VSQIKES-TKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNA 543 (716)
Q Consensus 468 -~~~~~~~~l~~~~~v~~v~fTGs~~~--g~~i~~~-a~~~~~lElGGk~p~iV~~dADl~~Aa~~iv~~~f~n~g~C~a 543 (716)
|+...-+++...-+||+|+=-|..=+ +|+.... .++- +--|=..-+|+-++||.+..+..++.-+=....
T Consensus 152 vGGAQAIAa~a~gt~VDkIvGPGN~yV~~AK~~v~g~V~ID--~~AGPSEvlViAD~a~p~~vAaDLLaQAEH~~~---- 225 (368)
T PRK13769 152 IGGPHGLAYAVFHMGVDMVAGPGGLYVQAAKYVLSQYVGID--GIEGPTELVVYAEGVPPEVAVRGALAQLEHGPT---- 225 (368)
T ss_pred ccCHHHHHHHhcCCCcCEEECCCcHHHHHHHHHHhCCcCCC--CcCCCcceEEEcCCCCHHHHHHHHHHHhhcCCC----
Confidence 54332234443348999987777643 3332111 1111 112223346666679999888777754332211
Q ss_pred ccceEEEeCccCChhhHHHHHHHHHhcCCEEecCccccccccCCCCccccccccCceEEEEEeCCHHHHHHHHHhcCCCc
Q 005047 544 MVETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLQIPETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAH 623 (716)
Q Consensus 544 ~~~rv~V~~~i~dd~f~~~l~~~~~~~~~~~~g~~~~~~~~pv~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL 623 (716)
. .-++|..+ .++.++..+++++.-. + ..|- ..|+-++|+|||++++|...-=
T Consensus 226 a-~~iLvT~s---~~la~~V~~~v~~~~~---------------------~-~~~~-~~iivv~~leeai~~~N~~APE- 277 (368)
T PRK13769 226 S-FAYLLSTD---AELLKAAEEIYRRERT---------------------S-SMGP-LEVRKVAGVEEAVRFIDEIAPE- 277 (368)
T ss_pred C-cEEEEECC---HHHHHHHHHHHHHHHH---------------------h-cCCC-CeEEEECCHHHHHHHHHhhChH-
Confidence 1 23444433 3566666666654200 0 1221 3467899999999999997532
Q ss_pred eeEEEccCHHHHHHHHHccCcceEEEcCCc
Q 005047 624 TDCIVAEDQKVAETFLCQVDSAAVFHNAST 653 (716)
Q Consensus 624 ~a~i~t~d~~~a~~~~~~~~~G~v~vN~~~ 653 (716)
-..|.+.+ . .+.+--.+|.|+++.+.
T Consensus 278 HLel~~~~-~---~~~~i~nAGsiFl~~p~ 303 (368)
T PRK13769 278 HLEVWGRR-E---VAYRVRNVGAVSVNMPS 303 (368)
T ss_pred heEeeCcH-H---HHhhCCccCChhcCCch
Confidence 23344422 2 22234468999996643
No 232
>PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed
Probab=80.69 E-value=3.8 Score=51.97 Aligned_cols=92 Identities=13% Similarity=0.124 Sum_probs=62.9
Q ss_pred CeEEEEeecceeEEEEEcCCCchhHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccccCcCceEEecCCchH
Q 005047 393 GLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDTVGEKLIGLVTSREEI 472 (716)
Q Consensus 393 ~~~~~~~~~PlGVv~~I~p~~P~~~~~~~~~ALaaGNtvv~Kps~~tp~t~~~l~~l~~~al~~alP~gvv~vv~~~~~~ 472 (716)
|......-.|.|+|+.+.+.-. -....++.+|++||.+|+..++.. .+++. .||+.|.+.+.-..
T Consensus 1178 GE~N~l~l~pRg~vLcl~~~~~-~~~~Ql~Aala~Gn~~v~~~~~~~-------~~~~~-----~Lp~~v~~~v~~~~-- 1242 (1318)
T PRK11809 1178 GERNTYTLLPRERVLCLADTEQ-DALTQLAAVLAVGSQALWPDDALH-------RALVA-----ALPAAVQARIQLAK-- 1242 (1318)
T ss_pred CCcceeeccCCCcEEEeCCCHH-HHHHHHHHHHHhCCEEEEeCCchh-------HHHHH-----hccHHHHhHhhhcc--
Confidence 4455566799999999987543 245667789999999998755432 23332 29999888774211
Q ss_pred HHhhcCCCCccEEEeecCHHHHHHHHHh
Q 005047 473 PDLLKLDDVIDLVIPRGSNKLVSQIKES 500 (716)
Q Consensus 473 ~~~l~~~~~v~~v~fTGs~~~g~~i~~~ 500 (716)
...+ ....++.|.|-|..+..+.+.++
T Consensus 1243 ~~~~-~~~~~~avl~~G~~~~l~~~~~~ 1269 (1318)
T PRK11809 1243 DWQL-ADQPFDAVLFHGDSDQLRALCEQ 1269 (1318)
T ss_pred cccc-ccCCccEEEEeCCHHHHHHHHHH
Confidence 1122 23569999999999977777554
No 233
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=72.82 E-value=4.4 Score=38.38 Aligned_cols=57 Identities=30% Similarity=0.324 Sum_probs=35.0
Q ss_pred EeecCCccccCCCcccccccccccchhchHHHHhcCCCCCcccCCcHHHHHHHHHHHHcCCcEEEeeCCCcchHHH
Q 005047 194 LLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIK 269 (716)
Q Consensus 194 ~~TDVdGVy~~dP~~p~a~~i~~is~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a~~~gi~v~I~~g~~~~~l~~ 269 (716)
+++|||||+|+ +++.=.-+-+|+.. + .+..|+--| ...+.||++-|+.|+....+..
T Consensus 11 li~DVDGvLTD------G~ly~~~~Gee~Ka---F-----nv~DG~Gik-----~l~~~Gi~vAIITGr~s~ive~ 67 (170)
T COG1778 11 LILDVDGVLTD------GKLYYDENGEEIKA---F-----NVRDGHGIK-----LLLKSGIKVAIITGRDSPIVEK 67 (170)
T ss_pred EEEeccceeec------CeEEEcCCCceeee---e-----eccCcHHHH-----HHHHcCCeEEEEeCCCCHHHHH
Confidence 45799999998 54433222233332 1 234444433 4567899999999988766643
No 234
>PF03437 BtpA: BtpA family; InterPro: IPR005137 Photosystem I (PSI) is a large protein complex embedded within the photosynthetic thylakoid membrane. It consists of 11 subunits, ~100 chlorophyll a molecules, 2 phylloquinones, and 3 Fe4S4-clusters. The three dimensional structure of the PSI complex has been resolved at 2.5 A [], which allows the precise localisation of each cofactor. PSI together with photosystem II (PSII) catalyses the light-induced steps in oxygenic photosynthesis - a process found in cyanobacteria, eukaryotic algae (e.g. red algae, green algae) and higher plants. To date, three thylakoid proteins involved in the stable accumulation of PSI have been identified: BtpA [], Ycf3 [, ], and Ycf4 (IPR003359 from INTERPRO) []. Because translation of the psaA and psaB mRNAs encoding the two reaction centre polypeptides, of PSI and PSII respectively, is not affected in mutant strains lacking functional ycf3 and ycf4, the products of these two genes appear to act at a post-translational step of PSI biosynthesis. These gene products are therefore involved either in the stabilisation or in the assembly of the PSI complex. However, their exact roles remain unknown. The BtpA protein appears to act at the level of PSI stabilisation []. It is an extrinsic membrane protein located on the cytoplasmic side of the thylakoid membrane [, ]. Homologs of BtpA are found in the crenarchaeota and euryarchaeota, where their function remains unknown. The Ycf4 protein is firmly associated with the thylakoid membrane, presumably through a transmembrane domain []. Ycf4 co-fractionates with a protein complex larger than PSI upon sucrose density gradient centrifugation of solubilised thylakoids []. The Ycf3 protein is loosely associated with the thylakoid membrane and can be released from the membrane with sodium carbonate. This suggests that Ycf3 is not part of a stable complex and that it probably interacts transiently with its partners []. Ycf3 contains a number of tetratrico peptide repeats (TPR, IPR001440 from INTERPRO); TPR is a structural motif present in a wide range of proteins, which mediates protein-protein interactions.
Probab=53.00 E-value=41 Score=34.90 Aligned_cols=116 Identities=22% Similarity=0.215 Sum_probs=63.1
Q ss_pred ecchHHHHHH-HhhcCCCEEEEeecCCccccCCCcccccccccccchhchHHHH-h-cCCCCCcccCCc---H---HHHH
Q 005047 174 WDNDSLAGLL-ALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEI-T-FGDKSRVGRGGM---T---AKVN 244 (716)
Q Consensus 174 ~~sD~~A~~l-A~~L~Ad~Li~~TDVdGVy~~dP~~p~a~~i~~is~~e~~~~~-~-~g~~~~~~~ggM---~---~Kl~ 244 (716)
++++....+. =++|+++ +-+++||.--... .+..-+.+|..+.. . ..+....+||.+ . .|++
T Consensus 123 ~~~~a~e~~r~R~~l~a~-v~ilaDV~~kh~~--------~l~~~~~~~~~~~a~~~~~aDaviVtG~~TG~~~~~~~l~ 193 (254)
T PF03437_consen 123 IEGCAGELLRYRKRLGAD-VKILADVHVKHSS--------PLATRDLEEAAKDAVERGGADAVIVTGKATGEPPDPEKLK 193 (254)
T ss_pred ccccHHHHHHHHHHcCCC-eEEEeeechhhcc--------cCCCCCHHHHHHHHHHhcCCCEEEECCcccCCCCCHHHHH
Confidence 4444433322 3578999 8888898763322 22332333332211 1 222222334332 2 3444
Q ss_pred HHHHHHHcCCcEEEeeCCCcchHHHH---hcCCcceeEEecCCcccc--chhhHHHHHHHH
Q 005047 245 AAYCAACAGIPVVITSGFAMDSIIKV---LEGKRVGTLFHRDAHLWV--KQVGAREMAVAA 300 (716)
Q Consensus 245 aa~~a~~~gi~v~I~~g~~~~~l~~~---~tg~~iGT~i~~~~~~~~--~~~~v~~av~~A 300 (716)
.+..++. +||+|-+|-.++++.+. .+|-.+||.+..+...+- ..+-+++-++++
T Consensus 194 ~vr~~~~--~PVlvGSGvt~~Ni~~~l~~ADG~IVGS~~K~~G~~~n~VD~~Rv~~fm~~v 252 (254)
T PF03437_consen 194 RVREAVP--VPVLVGSGVTPENIAEYLSYADGAIVGSYFKKDGKWENPVDPERVRRFMEAV 252 (254)
T ss_pred HHHhcCC--CCEEEecCCCHHHHHHHHHhCCEEEEeeeeeeCCEeCCcCCHHHHHHHHHHh
Confidence 4444443 89999999999999665 457777999886643221 344455554444
No 235
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=46.28 E-value=46 Score=32.22 Aligned_cols=59 Identities=17% Similarity=0.213 Sum_probs=35.2
Q ss_pred EeecCCccccCCC--cccccccccccchhchHHHHhcCCCCCcccCCcHHHHHHHHHHHHcCCcEEEeeCCCcchHHHHh
Q 005047 194 LLSDVEGLYSGPP--SEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVL 271 (716)
Q Consensus 194 ~~TDVdGVy~~dP--~~p~a~~i~~is~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a~~~gi~v~I~~g~~~~~l~~~~ 271 (716)
+.+|+|||+++.- -++++.-....+.. .|| +...+.+.|+++.|++++....+...+
T Consensus 10 ~v~d~dGv~tdg~~~~~~~g~~~~~~~~~----------------D~~-----~~~~L~~~Gi~laIiT~k~~~~~~~~l 68 (169)
T TIGR02726 10 VILDVDGVMTDGRIVINDEGIESRNFDIK----------------DGM-----GVIVLQLCGIDVAIITSKKSGAVRHRA 68 (169)
T ss_pred EEEeCceeeECCeEEEcCCCcEEEEEecc----------------hHH-----HHHHHHHCCCEEEEEECCCcHHHHHHH
Confidence 4679999999852 14444444444332 222 233456779998888877666555554
Q ss_pred cC
Q 005047 272 EG 273 (716)
Q Consensus 272 tg 273 (716)
..
T Consensus 69 ~~ 70 (169)
T TIGR02726 69 EE 70 (169)
T ss_pred HH
Confidence 43
No 236
>PF13376 OmdA: Bacteriocin-protection, YdeI or OmpD-Associated
Probab=40.07 E-value=40 Score=26.70 Aligned_cols=35 Identities=14% Similarity=0.115 Sum_probs=31.1
Q ss_pred hhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 005047 290 QVGAREMAVAARESSRRLQALQSQDRRKILLDVAD 324 (716)
Q Consensus 290 ~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~ 324 (716)
++|+..+++.-..|...|..++...|..++..+..
T Consensus 7 P~dl~~aL~~~p~a~~~f~~l~~~~rr~~i~wi~~ 41 (63)
T PF13376_consen 7 PEDLEAALEANPEAKEFFESLTPSYRREYIRWINS 41 (63)
T ss_pred CHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHH
Confidence 67899999998999999999999999999977653
No 237
>cd01390 HMGB-UBF_HMG-box HMGB-UBF_HMG-box, class II and III members of the HMG-box superfamily of DNA-binding proteins. These proteins bind the minor groove of DNA in a non-sequence specific fashion and contain two or more tandem HMG boxes. Class II members include non-histone chromosomal proteins, HMG1 and HMG2, which bind to bent or distorted DNA such as four-way DNA junctions, synthetic DNA cruciforms, kinked cisplatin-modified DNA, DNA bulges, cross-overs in supercoiled DNA, and can cause looping of linear DNA. Class III members include nucleolar and mitochondrial transcription factors, UBF and mtTF1, which bind four-way DNA junctions.
Probab=39.52 E-value=66 Score=25.08 Aligned_cols=35 Identities=11% Similarity=0.129 Sum_probs=27.4
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHH
Q 005047 298 VAARESSRRLQALQSQDRRKILLDVADALEANESL 332 (716)
Q Consensus 298 ~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 332 (716)
+.++..-..|+.+|.++|..+..+.....++..++
T Consensus 30 ~i~~~~~~~W~~ls~~eK~~y~~~a~~~~~~y~~e 64 (66)
T cd01390 30 EVTKILGEKWKELSEEEKKKYEEKAEKDKERYEKE 64 (66)
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHh
Confidence 45566778999999999999998887766665544
No 238
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=37.20 E-value=59 Score=29.87 Aligned_cols=47 Identities=32% Similarity=0.600 Sum_probs=31.6
Q ss_pred cCeEEEEeCCcccccCCCccc-HHHHHHHHHHHHHHHHCCCeEEEEeC
Q 005047 14 VKRLVVKVGTAVVTRSDGRLA-LGRLGALLEQLKELNSQGFEIILVSS 60 (716)
Q Consensus 14 ~~~iVIKiGGs~l~~~~~~~~-~~~~~~~a~~I~~l~~~G~~vvIVhG 60 (716)
+|.+++=+.|.++.+..+... ........+.+..++++|++++++.|
T Consensus 1 ~K~i~~DiDGTL~~~~~~~y~~~~~~~~~ie~L~~l~~~G~~IiiaTG 48 (126)
T TIGR01689 1 MKRLVMDLDNTITLTENGDYANVAPILAVIEKLRHYKALGFEIVISSS 48 (126)
T ss_pred CCEEEEeCCCCcccCCCCcccccccCHHHHHHHHHHHHCCCEEEEECC
Confidence 378999999999875432111 11134667778888889998777763
No 239
>PF09011 HMG_box_2: HMG-box domain; InterPro: IPR015101 This domain is predominantly found in Maelstrom homologue proteins. It has no known function. ; GO: 0005634 nucleus; PDB: 2EQZ_A 1V64_A 2CTO_A 1H5P_A 3TQ6_A 3FGH_A 3TMM_A 1J3X_A 2YRQ_A 1AAB_A ....
Probab=36.40 E-value=88 Score=25.36 Aligned_cols=36 Identities=17% Similarity=0.164 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHH
Q 005047 297 AVAARESSRRLQALQSQDRRKILLDVADALEANESL 332 (716)
Q Consensus 297 v~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 332 (716)
.+..+.+-..|+.+|.++|..+-.+....=++...+
T Consensus 33 ~e~~k~~~~~Wk~Ls~~EK~~Y~~~A~~~k~~y~~e 68 (73)
T PF09011_consen 33 REVMKEISERWKSLSEEEKEPYEERAKEDKERYERE 68 (73)
T ss_dssp HHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH
Confidence 345667788999999999999988876554444333
No 240
>PF10686 DUF2493: Protein of unknown function (DUF2493); InterPro: IPR019627 This entry is represented by Mycobacteriophage D29, Gp61. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. Members of this family are mainly Proteobacteria. The function is not known.
Probab=33.12 E-value=1.2e+02 Score=24.84 Aligned_cols=44 Identities=23% Similarity=0.306 Sum_probs=26.6
Q ss_pred CeEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCCh-hHhhH
Q 005047 15 KRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGA-VGVGR 67 (716)
Q Consensus 15 ~~iVIKiGGs~l~~~~~~~~~~~~~~~a~~I~~l~~~G~~vvIVhGGg-~~i~~ 67 (716)
.+.|+=-||.-.+|. ..+...+..+++.--..+|||||+ .....
T Consensus 3 g~rVli~GgR~~~D~---------~~i~~~Ld~~~~~~~~~~lvhGga~~GaD~ 47 (71)
T PF10686_consen 3 GMRVLITGGRDWTDH---------ELIWAALDKVHARHPDMVLVHGGAPKGADR 47 (71)
T ss_pred CCEEEEEECCccccH---------HHHHHHHHHHHHhCCCEEEEECCCCCCHHH
Confidence 345666788777753 344455555544334688999998 44443
No 241
>COG0279 GmhA Phosphoheptose isomerase [Carbohydrate transport and metabolism]
Probab=32.52 E-value=3.8e+02 Score=26.00 Aligned_cols=107 Identities=11% Similarity=0.126 Sum_probs=59.1
Q ss_pred HHHHHHHHHHHHHHHCCCeEEEEeCChhHhhH---HHhh---hhhcccCCcccccccccchhHHHHHHhchHH-HHHHHH
Q 005047 36 GRLGALLEQLKELNSQGFEIILVSSGAVGVGR---QRLR---YRKLVNSSLADLQKPQNELDGKACAAVGQSS-LMALYD 108 (716)
Q Consensus 36 ~~~~~~a~~I~~l~~~G~~vvIVhGGg~~i~~---~~~~---~~~~~~~~~~~~~~~~~~l~~~~~~a~g~~~-~~~~~~ 108 (716)
+.+.+.++.|.+....|.| ||+.|.|++... .... ++..-.+.+..+. ...+-..+.++++-. .+.+|+
T Consensus 25 ~~I~~aa~~i~~~l~~G~K-vl~cGNGgSaadAqHfaael~gRf~~eR~~lpaIa---Lt~dsS~lTai~NDy~yd~vFs 100 (176)
T COG0279 25 EAIERAAQLLVQSLLNGNK-VLACGNGGSAADAQHFAAELTGRFEKERPSLPAIA---LSTDSSVLTAIANDYGYDEVFS 100 (176)
T ss_pred HHHHHHHHHHHHHHHcCCE-EEEECCCcchhhHHHHHHHHhhHHHhcCCCCCeeE---eecccHHHhhhhccccHHHHHH
Confidence 4577788888887888866 577777776432 2111 1111111111111 111223455555533 456777
Q ss_pred HHhccCCCccceEEe---cCccCCchhhHhHHHHHHHHHHhCCCeEEe
Q 005047 109 TLFSQLDVTSSQLLV---TDSDFRDEDFRKQLYDTVQSLLDLRVIPIF 153 (716)
Q Consensus 109 ~~l~~~gi~~~~~~~---~~~~~~~~~~~~~~~~~i~~ll~~g~iPV~ 153 (716)
..+.+.|.+.- +++ |.++ -.+..+.++..-+.|+..|.
T Consensus 101 RqveA~g~~GD-vLigISTSGN------S~nVl~Ai~~Ak~~gm~vI~ 141 (176)
T COG0279 101 RQVEALGQPGD-VLIGISTSGN------SKNVLKAIEAAKEKGMTVIA 141 (176)
T ss_pred HHHHhcCCCCC-EEEEEeCCCC------CHHHHHHHHHHHHcCCEEEE
Confidence 88887775543 433 2332 23446789999999988775
No 242
>PTZ00174 phosphomannomutase; Provisional
Probab=32.01 E-value=84 Score=32.22 Aligned_cols=44 Identities=20% Similarity=0.359 Sum_probs=33.9
Q ss_pred ccCeEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCC
Q 005047 13 DVKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSG 61 (716)
Q Consensus 13 ~~~~iVIKiGGs~l~~~~~~~~~~~~~~~a~~I~~l~~~G~~vvIVhGG 61 (716)
+.|+++.=+.|+++.++. +++. ...+.|+.++++|++++|..|-
T Consensus 4 ~~klia~DlDGTLL~~~~-~is~----~~~~ai~~l~~~Gi~~viaTGR 47 (247)
T PTZ00174 4 KKTILLFDVDGTLTKPRN-PITQ----EMKDTLAKLKSKGFKIGVVGGS 47 (247)
T ss_pred CCeEEEEECcCCCcCCCC-CCCH----HHHHHHHHHHHCCCEEEEEcCC
Confidence 468899999999997654 4543 3467788899999998888753
No 243
>PF06945 DUF1289: Protein of unknown function (DUF1289); InterPro: IPR010710 This family consists of a number of hypothetical bacterial proteins. The aligned region spans around 56 residues and contains 4 highly conserved cysteine residues towards the N terminus. The function of this family is unknown.
Probab=31.58 E-value=54 Score=24.92 Aligned_cols=22 Identities=23% Similarity=0.410 Sum_probs=19.0
Q ss_pred HHHhcCCHHHHHHHHHHHHHHH
Q 005047 305 RRLQALQSQDRRKILLDVADAL 326 (716)
Q Consensus 305 ~~w~~~~~~~R~~~L~~~a~~l 326 (716)
..|..++..+|.+++.++....
T Consensus 28 ~~W~~~s~~er~~i~~~l~~R~ 49 (51)
T PF06945_consen 28 RDWKSMSDDERRAILARLRARR 49 (51)
T ss_pred HHHhhCCHHHHHHHHHHHHHHh
Confidence 4699999999999999887654
No 244
>PF00505 HMG_box: HMG (high mobility group) box; InterPro: IPR000910 High mobility group (HMG or HMGB) proteins are a family of relatively low molecular weight non-histone components in chromatin. HMG1 (also called HMG-T in fish) and HMG2 are two highly related proteins that bind single-stranded DNA preferentially and unwind double-stranded DNA. Although they have no sequence specificity, they have a high affinity for bent or distorted DNA, and bend linear DNA. HMG1 and HMG2 contain two DNA-binding HMG-box domains (A and B) that show structural and functional differences, and have a long acidic C-terminal domain rich in aspartic and glutamic acid residues. The acidic tail modulates the affinity of the tandem HMG boxes in HMG1 and 2 for a variety of DNA targets. HMG1 and 2 appear to play important architectural roles in the assembly of nucleoprotein complexes in a variety of biological processes, for example V(D)J recombination, the initiation of transcription, and DNA repair []. The profile in this entry describing the HMG-domains is much more general than the signature. In addition to the HMG1 and HMG2 proteins, HMG-domains occur in single or multiple copies in the following protein classes; the SOX family of transcription factors; SRY sex determining region Y protein and related proteins []; LEF1 lymphoid enhancer binding factor 1 []; SSRP recombination signal recognition protein; MTF1 mitochondrial transcription factor 1; UBF1/2 nucleolar transcription factors; Abf2 yeast ARS-binding factor []; and Saccharomyces cerevisiae transcription factors Ixr1, Rox1, Nhp6a, Nhp6b and Spp41.; GO: 0003677 DNA binding; PDB: 1I11_A 1J3C_A 1J3D_A 1WZ6_A 1WGF_A 2D7L_A 1GT0_D 3U2B_C 2CRJ_A 2CS1_A ....
Probab=31.29 E-value=1e+02 Score=24.31 Aligned_cols=36 Identities=8% Similarity=0.102 Sum_probs=27.8
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHH
Q 005047 298 VAARESSRRLQALQSQDRRKILLDVADALEANESLI 333 (716)
Q Consensus 298 ~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 333 (716)
+..+.+-..|+.+|.++|..+........+++..++
T Consensus 30 ~i~~~~~~~W~~l~~~eK~~y~~~a~~~~~~y~~~~ 65 (69)
T PF00505_consen 30 EISKILAQMWKNLSEEEKAPYKEEAEEEKERYEKEM 65 (69)
T ss_dssp HHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchhhHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 345666779999999999999888777766665544
No 245
>smart00398 HMG high mobility group.
Probab=30.89 E-value=1.2e+02 Score=23.64 Aligned_cols=35 Identities=11% Similarity=0.141 Sum_probs=26.9
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHH
Q 005047 299 AARESSRRLQALQSQDRRKILLDVADALEANESLI 333 (716)
Q Consensus 299 ~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 333 (716)
..+..-..|+.+|.++|..+........+++..++
T Consensus 32 i~~~~~~~W~~l~~~ek~~y~~~a~~~~~~y~~~~ 66 (70)
T smart00398 32 ISKKLGERWKLLSEEEKAPYEEKAKKDKERYEEEM 66 (70)
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 44566688999999999999888777666665544
No 246
>COG0434 SgcQ Predicted TIM-barrel enzyme [General function prediction only]
Probab=28.31 E-value=1.1e+02 Score=31.26 Aligned_cols=63 Identities=25% Similarity=0.371 Sum_probs=40.8
Q ss_pred HHHHHHHHHHHHc-CCcEEEeeCCCcchHHH---HhcCCcceeEEecCCcccc--chhhHHHHHHHHHH
Q 005047 240 TAKVNAAYCAACA-GIPVVITSGFAMDSIIK---VLEGKRVGTLFHRDAHLWV--KQVGAREMAVAARE 302 (716)
Q Consensus 240 ~~Kl~aa~~a~~~-gi~v~I~~g~~~~~l~~---~~tg~~iGT~i~~~~~~~~--~~~~v~~av~~A~~ 302 (716)
.+.++....+.+. ..||.+-||-.++++.+ ..+|-.+||.+..+...|- ..+-+.+.++.|++
T Consensus 191 ~~d~~el~~a~~~~~~pvlvGSGv~~eN~~~~l~~adG~IvgT~lK~~G~~~n~VD~~Rv~~~v~~a~~ 259 (263)
T COG0434 191 PPDLEELKLAKEAVDTPVLVGSGVNPENIEELLKIADGVIVGTSLKKGGVTWNPVDLERVRRFVEAARR 259 (263)
T ss_pred CCCHHHHHHHHhccCCCEEEecCCCHHHHHHHHHHcCceEEEEEEccCCEecCccCHHHHHHHHHHHHH
Confidence 3444544444442 38899999999999855 4557777999988876554 34444455554443
No 247
>cd01388 SOX-TCF_HMG-box SOX-TCF_HMG-box, class I member of the HMG-box superfamily of DNA-binding proteins. These proteins contain a single HMG box, and bind the minor groove of DNA in a highly sequence-specific manner. Members include SRY and its homologs in insects and vertebrates, and transcription factor-like proteins, TCF-1, -3, -4, and LEF-1. They appear to bind the minor groove of the A/T C A A A G/C-motif.
Probab=26.99 E-value=1.4e+02 Score=24.11 Aligned_cols=34 Identities=12% Similarity=0.171 Sum_probs=25.6
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHH
Q 005047 298 VAARESSRRLQALQSQDRRKILLDVADALEANES 331 (716)
Q Consensus 298 ~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 331 (716)
+.++..-..|+.++.++|..+........+++.+
T Consensus 31 eisk~l~~~Wk~ls~~eK~~y~~~a~~~k~~y~~ 64 (72)
T cd01388 31 AISKILGDRWKALSNEEKQPYYEEAKKLKELHMK 64 (72)
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHH
Confidence 4466777899999999999888776666555543
No 248
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=25.86 E-value=1.2e+02 Score=31.35 Aligned_cols=43 Identities=9% Similarity=0.198 Sum_probs=32.9
Q ss_pred ccCeEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeC
Q 005047 13 DVKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSS 60 (716)
Q Consensus 13 ~~~~iVIKiGGs~l~~~~~~~~~~~~~~~a~~I~~l~~~G~~vvIVhG 60 (716)
|.|.++.=+.|+++.+.. .++ ....+.|..++++|+++++..|
T Consensus 1 m~kli~~DlDGTLl~~~~-~i~----~~~~~ai~~l~~~G~~~~iaTG 43 (272)
T PRK15126 1 MARLAAFDMDGTLLMPDH-HLG----EKTLSTLARLRERDITLTFATG 43 (272)
T ss_pred CccEEEEeCCCcCcCCCC-cCC----HHHHHHHHHHHHCCCEEEEECC
Confidence 357899999999997543 454 3456778889999999888874
No 249
>PRK10976 putative hydrolase; Provisional
Probab=24.39 E-value=1.3e+02 Score=30.94 Aligned_cols=42 Identities=14% Similarity=0.282 Sum_probs=32.6
Q ss_pred cCeEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeC
Q 005047 14 VKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSS 60 (716)
Q Consensus 14 ~~~iVIKiGGs~l~~~~~~~~~~~~~~~a~~I~~l~~~G~~vvIVhG 60 (716)
.|.++.=+.|+++.+.. .++ ....+.|..++++|++++|..|
T Consensus 2 ikli~~DlDGTLl~~~~-~is----~~~~~ai~~l~~~G~~~~iaTG 43 (266)
T PRK10976 2 YQVVASDLDGTLLSPDH-TLS----PYAKETLKLLTARGIHFVFATG 43 (266)
T ss_pred ceEEEEeCCCCCcCCCC-cCC----HHHHHHHHHHHHCCCEEEEEcC
Confidence 47889999999997643 454 3456778889999999888874
No 250
>PLN03017 trehalose-phosphatase
Probab=23.68 E-value=1.9e+02 Score=31.80 Aligned_cols=66 Identities=15% Similarity=0.292 Sum_probs=44.0
Q ss_pred HHHHHHHhhcCCCEEEEeecCCcccc---CCCcccccccccccchhchHHHHhcCCCCCcccCCcHHHHHHHHHHHHcCC
Q 005047 178 SLAGLLALELKADLLVLLSDVEGLYS---GPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGI 254 (716)
Q Consensus 178 ~~A~~lA~~L~Ad~Li~~TDVdGVy~---~dP~~p~a~~i~~is~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a~~~gi 254 (716)
.....++...+..++++++|.||=+. ++| +.. .+ -+++..++..+..++
T Consensus 98 ~~~~~~~~~~~~k~~llflD~DGTL~Piv~~p---~~a---~i----------------------~~~~~~aL~~La~~~ 149 (366)
T PLN03017 98 EMFEQIMEASRGKQIVMFLDYDGTLSPIVDDP---DKA---FM----------------------SSKMRRTVKKLAKCF 149 (366)
T ss_pred HHHHHHHHHhcCCCeEEEEecCCcCcCCcCCc---ccc---cC----------------------CHHHHHHHHHHhcCC
Confidence 44566777777888999999999665 322 221 11 123444444455778
Q ss_pred cEEEeeCCCcchHHHHh
Q 005047 255 PVVITSGFAMDSIIKVL 271 (716)
Q Consensus 255 ~v~I~~g~~~~~l~~~~ 271 (716)
++.|++|+....+.+..
T Consensus 150 ~vaIvSGR~~~~l~~~~ 166 (366)
T PLN03017 150 PTAIVTGRCIDKVYNFV 166 (366)
T ss_pred cEEEEeCCCHHHHHHhh
Confidence 89999999988887654
No 251
>cd00084 HMG-box High Mobility Group (HMG)-box is found in a variety of eukaryotic chromosomal proteins and transcription factors. HMGs bind to the minor groove of DNA and have been classified by DNA binding preferences. Two phylogenically distinct groups of Class I proteins bind DNA in a sequence specific fashion and contain a single HMG box. One group (SOX-TCF) includes transcription factors, TCF-1, -3, -4; and also SRY and LEF-1, which bind four-way DNA junctions and duplex DNA targets. The second group (MATA) includes fungal mating type gene products MC, MATA1 and Ste11. Class II and III proteins (HMGB-UBF) bind DNA in a non-sequence specific fashion and contain two or more tandem HMG boxes. Class II members include non-histone chromosomal proteins, HMG1 and HMG2, which bind to bent or distorted DNA such as four-way DNA junctions, synthetic DNA cruciforms, kinked cisplatin-modified DNA, DNA bulges, cross-overs in supercoiled DNA, and can cause looping of linear DNA. Class III member
Probab=23.57 E-value=2e+02 Score=22.01 Aligned_cols=34 Identities=12% Similarity=0.124 Sum_probs=25.5
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHH
Q 005047 298 VAARESSRRLQALQSQDRRKILLDVADALEANES 331 (716)
Q Consensus 298 ~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 331 (716)
+..+.....|+.++.++|..+..+......++..
T Consensus 30 ~i~~~~~~~W~~l~~~~k~~y~~~a~~~~~~y~~ 63 (66)
T cd00084 30 EISKILGEMWKSLSEEEKKKYEEKAEKDKERYEK 63 (66)
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH
Confidence 3456667889999999999998877666555443
No 252
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=23.29 E-value=1.3e+02 Score=30.89 Aligned_cols=42 Identities=10% Similarity=0.347 Sum_probs=32.3
Q ss_pred cCeEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeC
Q 005047 14 VKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSS 60 (716)
Q Consensus 14 ~~~iVIKiGGs~l~~~~~~~~~~~~~~~a~~I~~l~~~G~~vvIVhG 60 (716)
.|+++.-+.|+++.+.. +++ ....+.|.+++++|++++|..|
T Consensus 3 ~kli~~DlDGTLl~~~~-~i~----~~~~~ai~~l~~~G~~~~iaTG 44 (270)
T PRK10513 3 IKLIAIDMDGTLLLPDH-TIS----PAVKQAIAAARAKGVNVVLTTG 44 (270)
T ss_pred eEEEEEecCCcCcCCCC-ccC----HHHHHHHHHHHHCCCEEEEecC
Confidence 57889999999997643 454 3446778889999999888874
No 253
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=20.53 E-value=1.7e+02 Score=29.10 Aligned_cols=43 Identities=16% Similarity=0.431 Sum_probs=32.1
Q ss_pred cCeEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCC
Q 005047 14 VKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSG 61 (716)
Q Consensus 14 ~~~iVIKiGGs~l~~~~~~~~~~~~~~~a~~I~~l~~~G~~vvIVhGG 61 (716)
.|.++.=+.|+++.+.. .++ ....+.|..+++.|.+++|+.|=
T Consensus 3 ~kli~~DlDGTLl~~~~-~i~----~~~~~al~~l~~~G~~~~iaTGR 45 (230)
T PRK01158 3 IKAIAIDIDGTITDKDR-RLS----LKAVEAIRKAEKLGIPVILATGN 45 (230)
T ss_pred eeEEEEecCCCcCCCCC-ccC----HHHHHHHHHHHHCCCEEEEEcCC
Confidence 47888899999997543 343 34567788888999998888753
No 254
>COG1206 Gid NAD(FAD)-utilizing enzyme possibly involved in translation [Translation, ribosomal structure and biogenesis]
Probab=20.40 E-value=4.2e+02 Score=28.74 Aligned_cols=108 Identities=22% Similarity=0.229 Sum_probs=63.0
Q ss_pred HHHHHhcccc-cCcCceEEec--C-CchHHHhhcCCCCccE--------------EEeec---CHHHHHHHHHhcCCCEE
Q 005047 448 KVITSAIPDT-VGEKLIGLVT--S-REEIPDLLKLDDVIDL--------------VIPRG---SNKLVSQIKESTKIPVL 506 (716)
Q Consensus 448 ~l~~~al~~a-lP~gvv~vv~--~-~~~~~~~l~~~~~v~~--------------v~fTG---s~~~g~~i~~~a~~~~~ 506 (716)
.++-++..++ +|.|----|. + ...+.+.+..||.|-. |+-|| |......|.+-.+.-.+
T Consensus 78 Slii~~Ad~~~VPAGgALAVDR~~Fs~~vT~~l~~hpli~vireEvt~iP~dg~~vIATGPLTs~~La~~i~~ltG~d~l 157 (439)
T COG1206 78 SLIIEAADKHRVPAGGALAVDRDGFSQAVTEKLENHPLIEVIREEVTEIPPDGITVIATGPLTSDALAEKIKELTGEDYL 157 (439)
T ss_pred hHHhhhhhhccCCCCceeeecHhHHHHHHHHHHhcCCCEEEEccccccCCCCCcEEEecCCCCCHHHHHHHHHhhCCceE
Confidence 3444444445 8887555554 3 3556677777775543 44555 44555555443332222
Q ss_pred EecCCcceEEEcCCCCHHHHHHHHHHhcCCCCC----ccccccceEEEeCccCChhhHHHHHHH
Q 005047 507 GHADGICHVYVDKSANLDVAKNIVIDAKIDYPA----ACNAMVETLLVHKDLACNGALNELVVE 566 (716)
Q Consensus 507 lElGGk~p~iV~~dADl~~Aa~~iv~~~f~n~g----~C~a~~~rv~V~~~i~dd~f~~~l~~~ 566 (716)
.=----+|.|..++-|.|.+- ..|++..++ .|-=. ++-| +.|.++|++.
T Consensus 158 ~FyDAaAPIi~~dSIdmd~~~---~~sRYdKg~a~YiNCPmt-------kEey-~~F~eaL~~a 210 (439)
T COG1206 158 YFYDAAAPIIEFDSIDMDKAY---LKSRYDKGEADYINCPMT-------KEEY-LAFYEALIEA 210 (439)
T ss_pred EeecccCceeeccccchHHHH---hhhccccccchhhcCCCC-------HHHH-HHHHHHHHhc
Confidence 222345788888889998753 346666653 35444 6778 6898888764
No 255
>PF03740 PdxJ: Pyridoxal phosphate biosynthesis protein PdxJ; InterPro: IPR004569 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. In Escherichia coli, the pdx genes involved in vitamin B6 have been characterised [, , ]. This entry represents PdxJ, which catalyses the condensation of 1-amino-3-oxo-4-(phosphohydroxy)propan-2-one and 1-deoxy-D-xylulose-5-phosphate to form pyridoxine-5'-phosphate. The product of the PdxJ reaction is then oxidized by PdxH to pyridoxal 5'-phosphate.; GO: 0008615 pyridoxine biosynthetic process, 0005737 cytoplasm; PDB: 3F4N_B 3O6D_A 3O6C_A 1M5W_G 1IXQ_D 1IXP_B 1IXN_A 1HO4_C 1HO1_A 1IXO_D ....
Probab=20.24 E-value=8.9e+02 Score=24.88 Aligned_cols=101 Identities=21% Similarity=0.183 Sum_probs=62.2
Q ss_pred HHHHHHHHHHhCCCeEEeeCCCceecCCCCCCCCCceeecchHHHHHHHhhcCCCEEEEeecCCccccCCCccccccccc
Q 005047 136 QLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIH 215 (716)
Q Consensus 136 ~~~~~i~~ll~~g~iPV~~g~d~v~~~~~~~~~~g~~~~~sD~~A~~lA~~L~Ad~Li~~TDVdGVy~~dP~~p~a~~i~ 215 (716)
...+.+.+|-+.|+-.=+ |++.|.-....|..++||.+-+-| |-|-+ + ..
T Consensus 112 ~l~~~i~~L~~~gIrvSL-------------------FiDP~~~qi~~A~~~Gad~VELhT---G~yA~------a--~~ 161 (239)
T PF03740_consen 112 RLKPVIKRLKDAGIRVSL-------------------FIDPDPEQIEAAKELGADRVELHT---GPYAN------A--FD 161 (239)
T ss_dssp HHHHHHHHHHHTT-EEEE-------------------EE-S-HHHHHHHHHTT-SEEEEET---HHHHH------H--SS
T ss_pred HHHHHHHHHHhCCCEEEE-------------------EeCCCHHHHHHHHHcCCCEEEEeh---hHhhh------h--cC
Confidence 345778888888853222 477799999999999999999988 55533 1 11
Q ss_pred ccchhchHH-HHhcCCCCCcccCCcHHHHHHHHHHHHcCCcEEEeeCCCcchHHHHhcCCcceeEEe
Q 005047 216 TYIRAKHQA-EITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFH 281 (716)
Q Consensus 216 ~is~~e~~~-~~~~g~~~~~~~ggM~~Kl~aa~~a~~~gi~v~I~~g~~~~~l~~~~tg~~iGT~i~ 281 (716)
..++..+ ++. .-..+|..|.+.|+.|+-.-|....++..+..-..+..+-.
T Consensus 162 --~~~~~~~ell~-------------~l~~aa~~a~~lGL~VnAGHgL~y~N~~~i~~i~~i~EvnI 213 (239)
T PF03740_consen 162 --DAEEAEEELLE-------------RLRDAARYAHELGLGVNAGHGLNYDNVRPIAAIPPIEEVNI 213 (239)
T ss_dssp --HHHHHHHHHHH-------------HHHHHHHHHHHTT-EEEEETT--TTTHHHHHTSTTEEEEEE
T ss_pred --CHHHHHHHHHH-------------HHHHHHHHHHHcCCEEecCCCCCHHHHHHHHhCCCceEEec
Confidence 1111211 111 12356778889999999999999999888776555555543
No 256
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=20.04 E-value=1.9e+02 Score=29.70 Aligned_cols=42 Identities=17% Similarity=0.379 Sum_probs=32.2
Q ss_pred cCeEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeC
Q 005047 14 VKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSS 60 (716)
Q Consensus 14 ~~~iVIKiGGs~l~~~~~~~~~~~~~~~a~~I~~l~~~G~~vvIVhG 60 (716)
.|.++.=+.|+++.++. .++. +..+.|..++++|++++|..|
T Consensus 3 ~kli~~DlDGTLl~~~~-~i~~----~~~~ai~~~~~~G~~~~iaTG 44 (272)
T PRK10530 3 YRVIALDLDGTLLTPKK-TILP----ESLEALARAREAGYKVIIVTG 44 (272)
T ss_pred ccEEEEeCCCceECCCC-ccCH----HHHHHHHHHHHCCCEEEEEcC
Confidence 57899999999997643 3442 346778889999998888774
Done!