Your job contains 1 sequence.
>005048
MFLVEQVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVD
WLAHGQQAVELYSEQHRKTSLSHDKLLFGSVQAAIKALWELSVLQKKTPGNRKWKDACGK
DGVLTKAIKTRVQMKKEGLQKLPSYFKLQKMEIDFDLKTERECFSCFYDLHLSAAGCKCS
PDRFACLKHANIFCSCEIDHRFVILRYSTDELNTLVEALEGGLDALKELASKNFKWADCS
DTDGGLVKMDMESEVFPMDCCEQKESSSSSPRVENIVEGNGPCCSRSHVSSEVVQSEPQR
GTSGLSASHVSVNSHNEGNDETQVMNKKAKVKHEVCIDLNMDVIPDGNESKLLLSDSHGK
EAIENLKAHLSACYQEKVLCSGTVKEQDTMQVRSDCNSSNSHKDPNKDQPSCSRVIEGTC
SFDVKKLFGVDLSLPHQQSKLPLVDFLKTDTINGSNVRTSVTDQRFQKKLETCVEPINFG
CVMCGKLWCSKQAIFPKGFRSRVNFYSVLNPEKVCNYISEVLDAGLLGPLFKVTLEECPS
ETFVNVSAQKCWEMVLQRLNQEIERQGGLHERGLPHPQSLQSIDGLEMFGFLSSPIIQAI
EALDPNHLCMEYWNHKLLTFGKTTEVNKNSSSGLSCSEAETKSKIFGVALMDEDQNSPSG
QNSVEEEAQLVLRGLFQKASPKELKVMQRILYSEGRSDEWRVALATLIEEIQKSCR
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 005048
(716 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2128659 - symbol:JMJ14 "JUMONJI 14" species:37... 810 1.9e-136 3
TAIR|locus:2196979 - symbol:JMJ18 "Jumonji domain-contain... 784 1.1e-131 2
TAIR|locus:2025635 - symbol:PKDM7D species:3702 "Arabidop... 714 7.9e-119 3
TAIR|locus:2044697 - symbol:MEE27 "maternal effect embryo... 707 6.0e-116 2
TAIR|locus:2064910 - symbol:AT2G38950 species:3702 "Arabi... 536 1.2e-51 1
TAIR|locus:2031290 - symbol:AT1G63490 species:3702 "Arabi... 321 2.3e-24 2
ZFIN|ZDB-GENE-030424-1 - symbol:kdm5bb "lysine (K)-specif... 240 3.2e-24 2
ZFIN|ZDB-GENE-030131-5379 - symbol:kdm5ba "lysine (K)-spe... 231 1.7e-23 3
UNIPROTKB|F1NRC4 - symbol:KDM5B "Lysine-specific demethyl... 235 5.9e-23 2
UNIPROTKB|F1NUR9 - symbol:KDM5B "Lysine-specific demethyl... 235 6.0e-23 2
UNIPROTKB|Q5F3R2 - symbol:KDM5B "Lysine-specific demethyl... 235 6.0e-23 2
UNIPROTKB|I3L8V3 - symbol:KDM5A "Uncharacterized protein"... 294 9.0e-23 1
UNIPROTKB|B3KV94 - symbol:JARID1B "cDNA FLJ16281 fis, clo... 233 1.7e-22 2
UNIPROTKB|F1S4N3 - symbol:KDM5B "Uncharacterized protein"... 233 1.8e-22 2
UNIPROTKB|F1PJS3 - symbol:KDM5B "Uncharacterized protein"... 233 1.9e-22 2
RGD|1305429 - symbol:Kdm5a "lysine (K)-specific demethyla... 296 2.1e-22 1
UNIPROTKB|E9PSW7 - symbol:Jarid1a "Protein Jarid1a" speci... 296 2.1e-22 1
UNIPROTKB|B4E1Y0 - symbol:KDM5D "Lysine-specific demethyl... 221 2.3e-22 2
UNIPROTKB|Q9UGL1 - symbol:KDM5B "Lysine-specific demethyl... 233 2.7e-22 2
MGI|MGI:1922855 - symbol:Kdm5b "lysine (K)-specific demet... 233 2.7e-22 2
RGD|1565602 - symbol:Kdm5b "lysine (K)-specific demethyla... 233 2.7e-22 2
MGI|MGI:2136980 - symbol:Kdm5a "lysine (K)-specific demet... 297 3.0e-22 1
UNIPROTKB|E7EV89 - symbol:KDM5A "Lysine-specific demethyl... 291 3.3e-22 1
UNIPROTKB|F1Q4J4 - symbol:KDM5A "Uncharacterized protein"... 296 3.8e-22 1
UNIPROTKB|E9PSM3 - symbol:Jarid1a "Protein Jarid1a" speci... 296 3.8e-22 1
FB|FBgn0031759 - symbol:lid "little imaginal discs" speci... 234 3.9e-22 3
UNIPROTKB|F1MQ59 - symbol:KDM5A "Uncharacterized protein"... 295 5.0e-22 1
UNIPROTKB|E9PFH2 - symbol:KDM5D "Lysine-specific demethyl... 221 8.9e-22 2
UNIPROTKB|Q9BY66 - symbol:KDM5D "Lysine-specific demethyl... 221 9.9e-22 2
UNIPROTKB|F5H1F7 - symbol:KDM5A "Lysine-specific demethyl... 291 1.3e-21 1
UNIPROTKB|P29375 - symbol:KDM5A "Lysine-specific demethyl... 291 1.3e-21 1
WB|WBGene00004319 - symbol:rbr-2 species:6239 "Caenorhabd... 289 1.8e-21 1
UNIPROTKB|Q23541 - symbol:rbr-2 "Lysine-specific demethyl... 289 1.8e-21 1
UNIPROTKB|F1MUR2 - symbol:KDM5B "Uncharacterized protein"... 233 2.0e-21 3
UNIPROTKB|F1NN75 - symbol:KDM5A "Uncharacterized protein"... 229 2.2e-20 3
ZFIN|ZDB-GENE-060810-94 - symbol:kdm5c "lysine (K)-specif... 210 3.3e-20 2
DICTYBASE|DDB_G0268778 - symbol:rbbB "putative Retinoblas... 253 1.4e-16 3
UNIPROTKB|D4A3B4 - symbol:D4A3B4 "Uncharacterized protein... 239 9.4e-15 2
UNIPROTKB|A1YVX4 - symbol:KDM5C "Lysine-specific demethyl... 222 3.3e-14 1
UNIPROTKB|F1RUI7 - symbol:KDM5C "Lysine-specific demethyl... 222 3.3e-14 1
UNIPROTKB|E2R0S2 - symbol:KDM5C "Lysine-specific demethyl... 222 3.3e-14 1
UNIPROTKB|Q38JA7 - symbol:KDM5C "Lysine-specific demethyl... 222 3.4e-14 1
UNIPROTKB|B0QZ44 - symbol:KDM5C "Smcy homolog, X-linked (... 222 3.4e-14 1
UNIPROTKB|K7GNM7 - symbol:KDM5C "Lysine-specific demethyl... 222 3.5e-14 1
UNIPROTKB|P41229 - symbol:KDM5C "Lysine-specific demethyl... 222 3.5e-14 1
UNIPROTKB|Q30DN6 - symbol:KDM5D "Lysine-specific demethyl... 224 1.3e-13 2
MGI|MGI:99781 - symbol:Kdm5c "lysine (K)-specific demethy... 222 5.5e-13 2
ZFIN|ZDB-GENE-030131-6279 - symbol:kdm4ab "lysine (K)-spe... 197 6.9e-13 2
ZFIN|ZDB-GENE-070705-160 - symbol:si:ch211-262l3.1 "si:ch... 197 6.9e-13 2
UNIPROTKB|F1MYV2 - symbol:KDM5C "Uncharacterized protein"... 222 8.9e-13 2
ASPGD|ASPL0000010243 - symbol:AN8211 species:162425 "Emer... 218 9.2e-13 2
MGI|MGI:99780 - symbol:Kdm5d "lysine (K)-specific demethy... 222 1.1e-12 2
UNIPROTKB|G4N2P7 - symbol:MGG_04878 "Lid2 complex compone... 223 1.5e-12 2
UNIPROTKB|Q6B0I6 - symbol:KDM4D "Lysine-specific demethyl... 197 3.4e-12 1
POMBASE|SPAC1002.05c - symbol:jmj2 "histone demethylase J... 184 3.6e-12 2
MGI|MGI:3606484 - symbol:Kdm4d "lysine (K)-specific demet... 195 5.3e-12 1
UNIPROTKB|F1SMN9 - symbol:F1SMN9 "Uncharacterized protein... 199 6.3e-12 1
RGD|1591045 - symbol:Kdm4d "lysine (K)-specific demethyla... 194 6.9e-12 1
UNIPROTKB|F5GYH2 - symbol:KDM4C "Lysine-specific demethyl... 195 7.9e-12 1
UNIPROTKB|B2RXH2 - symbol:KDM4E "Lysine-specific demethyl... 192 1.1e-11 1
UNIPROTKB|E1BX38 - symbol:Gga.52669 "Uncharacterized prot... 196 1.4e-11 1
RGD|1307528 - symbol:Kdm4c "lysine (K)-specific demethyla... 195 1.5e-11 2
CGD|CAL0000662 - symbol:orf19.5651 species:5476 "Candida ... 192 2.1e-11 1
UNIPROTKB|E7EV17 - symbol:KDM4C "Lysine-specific demethyl... 195 3.0e-11 2
UNIPROTKB|E1C6D5 - symbol:KDM4A "Uncharacterized protein"... 202 3.4e-11 2
MGI|MGI:1924054 - symbol:Kdm4c "lysine (K)-specific demet... 195 5.0e-11 2
UNIPROTKB|Q9H3R0 - symbol:KDM4C "Lysine-specific demethyl... 195 6.4e-11 2
UNIPROTKB|O94953 - symbol:KDM4B "Lysine-specific demethyl... 189 8.0e-11 1
UNIPROTKB|F5GX28 - symbol:KDM4B "Lysine-specific demethyl... 189 8.3e-11 1
UNIPROTKB|E2R243 - symbol:KDM4B "Uncharacterized protein"... 189 8.3e-11 1
FB|FBgn0053182 - symbol:Kdm4B "Histone demethylase 4B" sp... 185 8.7e-11 1
ZFIN|ZDB-GENE-070209-38 - symbol:zgc:153957 "zgc:153957" ... 190 9.5e-11 2
ZFIN|ZDB-GENE-120215-3 - symbol:si:ch211-215f22.3 "si:ch2... 186 9.9e-11 3
UNIPROTKB|F1N9S1 - symbol:F1N9S1 "Uncharacterized protein... 195 1.8e-10 2
TAIR|locus:2146653 - symbol:ELF6 "EARLY FLOWERING 6" spec... 191 3.1e-10 2
UNIPROTKB|E1BA41 - symbol:KDM4B "Uncharacterized protein"... 189 3.2e-10 2
UNIPROTKB|F1PHR7 - symbol:KDM4C "Uncharacterized protein"... 195 3.3e-10 2
RGD|1306378 - symbol:Kdm4a "lysine (K)-specific demethyla... 192 3.5e-10 2
UNIPROTKB|E1BPL5 - symbol:KDM4A "Uncharacterized protein"... 193 3.5e-10 2
MGI|MGI:2446210 - symbol:Kdm4a "lysine (K)-specific demet... 192 4.5e-10 2
ZFIN|ZDB-GENE-060503-664 - symbol:kdm4b "lysine (K)-speci... 189 5.4e-10 2
UNIPROTKB|Q5RD88 - symbol:KDM4A "Lysine-specific demethyl... 193 8.2e-10 3
UNIPROTKB|E2RFE0 - symbol:KDM4A "Uncharacterized protein"... 193 8.2e-10 3
UNIPROTKB|O75164 - symbol:KDM4A "Lysine-specific demethyl... 193 1.0e-09 3
MGI|MGI:2442355 - symbol:Kdm4b "lysine (K)-specific demet... 189 1.6e-09 2
TAIR|locus:504955644 - symbol:REF6 "relative of early flo... 187 3.6e-09 2
ASPGD|ASPL0000057825 - symbol:AN1060 species:162425 "Emer... 176 4.2e-09 2
FB|FBgn0033233 - symbol:Kdm4A "Histone demethylase 4A" sp... 163 1.6e-08 1
SGD|S000000971 - symbol:RPH1 "JmjC domain-containing hist... 161 2.5e-08 2
CGD|CAL0004209 - symbol:orf19.2730 species:5476 "Candida ... 156 1.3e-07 1
UNIPROTKB|Q5AF79 - symbol:RPH2 "Potential jumonji-like tr... 156 1.3e-07 1
UNIPROTKB|F1RUJ7 - symbol:JARID2 "Uncharacterized protein... 156 3.3e-07 1
MGI|MGI:104813 - symbol:Jarid2 "jumonji, AT rich interact... 156 3.4e-07 1
UNIPROTKB|Q9U297 - symbol:jmjd-2 "Lysine-specific demethy... 164 3.9e-07 2
UNIPROTKB|Q92833 - symbol:JARID2 "Protein Jumonji" specie... 155 4.3e-07 1
UNIPROTKB|F1MH56 - symbol:JARID2 "Uncharacterized protein... 155 4.4e-07 1
UNIPROTKB|F1P6D5 - symbol:JARID2 "Uncharacterized protein... 155 4.4e-07 1
UNIPROTKB|J9NWC2 - symbol:JARID2 "Uncharacterized protein... 155 4.4e-07 1
CGD|CAL0004229 - symbol:orf19.2743 species:5476 "Candida ... 156 6.9e-07 2
UNIPROTKB|Q5AFV0 - symbol:RPH1 "Potential jumonji-like tr... 156 6.9e-07 2
WARNING: Descriptions of 12 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2128659 [details] [associations]
symbol:JMJ14 "JUMONJI 14" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=RCA;TAS]
[GO:0032453 "histone demethylase activity (H3-K4 specific)"
evidence=IDA] [GO:0048573 "photoperiodism, flowering" evidence=IMP]
[GO:0009910 "negative regulation of flower development"
evidence=IMP] [GO:0034720 "histone H3-K4 demethylation"
evidence=IMP] [GO:0010216 "maintenance of DNA methylation"
evidence=IMP] [GO:0043687 "post-translational protein modification"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] InterPro:IPR003347 InterPro:IPR003888
InterPro:IPR003889 InterPro:IPR004198 Pfam:PF02373 Pfam:PF02928
Pfam:PF05964 Pfam:PF05965 PROSITE:PS51184 PROSITE:PS51542
PROSITE:PS51543 SMART:SM00541 SMART:SM00542 SMART:SM00558
GO:GO:0005654 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003700
GO:GO:0006351 GO:GO:0016702 GO:GO:0009910 GO:GO:0048573
EMBL:AL161553 EMBL:AL080253 GO:GO:0010216 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 eggNOG:NOG327026
GO:GO:0032453 EMBL:BT002486 EMBL:BT010548 IPI:IPI00516310
IPI:IPI00656704 PIR:T10582 RefSeq:NP_001031681.1 RefSeq:NP_193773.2
UniGene:At.43482 ProteinModelPortal:Q8GUI6 SMR:Q8GUI6 IntAct:Q8GUI6
PaxDb:Q8GUI6 PRIDE:Q8GUI6 EnsemblPlants:AT4G20400.1 GeneID:827788
KEGG:ath:AT4G20400 TAIR:At4g20400 HOGENOM:HOG000241335
InParanoid:Q8GUI6 KO:K11446 OMA:VQRSGEF PhylomeDB:Q8GUI6
ProtClustDB:CLSN2679960 Genevestigator:Q8GUI6 Uniprot:Q8GUI6
Length = 954
Score = 810 (290.2 bits), Expect = 1.9e-136, Sum P(3) = 1.9e-136
Identities = 173/332 (52%), Positives = 215/332 (64%)
Query: 3 LVEQVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWL 62
L + VTQLSP +LK EGVPVY VQ SGEF+LTFP+AYHSGFNCGFNCAEAVNVAPVDWL
Sbjct: 359 LHQLVTQLSPRILKEEGVPVYRAVQRSGEFILTFPKAYHSGFNCGFNCAEAVNVAPVDWL 418
Query: 63 AHGQQAVELYSEQHRKTSLSHDKLLFGSVQAAIKALWELSVLQKKTPGNRKWKDACGKDG 122
HGQ AVE YS+Q RK+SLSHDKLL G+ A LWELS+ +KKTP +WK C +DG
Sbjct: 419 VHGQNAVEGYSKQRRKSSLSHDKLLLGAAMEATYCLWELSLSKKKTPVIARWKRVCSEDG 478
Query: 123 VLTKAIKTRVQMKKEGLQKLPSYFKLQKMEIDFDLKTERECFSCFYDLHLSAAGCKCSPD 182
+LTKA+K RVQM++E L L F L+KME DFD K ERECF CFYDLH+SA+ CKCSP+
Sbjct: 479 LLTKAVKKRVQMEEERLNHLQDGFSLRKMEGDFDNKRERECFLCFYDLHMSASSCKCSPN 538
Query: 183 RFACLKHANIFCSCEIDHRFVILRYSTDELNTLVEALEGGLDALKELASKNFKWADCSDT 242
RFACL HA CSCE R++++R++ DEL LV ALEG LDA+ ASK C D
Sbjct: 539 RFACLIHAKDLCSCESKDRYILIRHTLDELWALVRALEGDLDAIDLWASK------CRDQ 592
Query: 243 DGGLVKMDME-SEVFPMDCCEQKESSSSSPRVENIVEGNGPCCSRSHVSSEVVQSEPQRG 301
E + + C + + SS R +N ++ S++ VQ + Q G
Sbjct: 593 YPSQHPRAREYAYLKSAPCIKSRGSSKVQQREQNNLQLVSERLQSDLTSNKEVQLK-QDG 651
Query: 302 TSGLSA-SHVSVNSHNEG-NDETQVMNKKAKV 331
S ++ H S +H G D++ V + K V
Sbjct: 652 DSDVNRHGHESERNHVHGITDKSAVTDVKLGV 683
Score = 463 (168.0 bits), Expect = 1.9e-136, Sum P(3) = 1.9e-136
Identities = 105/227 (46%), Positives = 140/227 (61%)
Query: 398 SSNSHKDPNKDQPSCSRVIEGTCS-FDVKKLFGVDLSLPHQQSKLPLVDFLK-TDTINGS 455
S +H D+ + + V G FD KK+ V+ PH S + + K D G
Sbjct: 662 SERNHVHGITDKSAVTDVKLGVGGKFDEKKI-SVESQNPHSVSDVGCSELAKKVDGCLGG 720
Query: 456 NVRTSVTDQRFQKKLETCVEPINFGCVMCGKLWCSKQAIFPKGFRSRVNFYSVLNPEKVC 515
+ + T+ +L VE ++ G ++ KLWCSKQAI+PKGF+SRV F SVL+P +
Sbjct: 721 KDQNAATN-----RLSLSVELLSSGSLVVKKLWCSKQAIYPKGFKSRVKFLSVLDPTNLT 775
Query: 516 NYISEVLDAGLLGPLFKVTLEECPSETFVNVSAQKCWEMVLQRLNQEIERQGGLHERGLP 575
NYISEVLDAGLLGPLF+V++E+ P+E F NVSA+KCW+MV QRL EI ++ L
Sbjct: 776 NYISEVLDAGLLGPLFRVSVEDYPTENFSNVSAEKCWQMVTQRLKLEIIKKCDQPVSSLT 835
Query: 576 HPQSLQSIDGLEMFGFLSSPIIQAIEALDPNHLCMEYWNHKLLT-FG 621
Q L+SI+GLEMFGFLS +I+ +EALDP H EYWN K + FG
Sbjct: 836 SLQPLESINGLEMFGFLSPHVIKVVEALDPKHQLEEYWNQKAVKLFG 882
Score = 99 (39.9 bits), Expect = 1.9e-136, Sum P(3) = 1.9e-136
Identities = 26/76 (34%), Positives = 46/76 (60%)
Query: 644 KIFGVALMDE---DQNSPSGQN--SVEEEAQLVLRGLFQKASPKELKVMQRILYSEGRSD 698
K+FG + E D G + S++ + +L LRGL +KA+P+EL +M +L E R+
Sbjct: 879 KLFGAEPIKEGEKDDTEKGGASDPSLDRDTRL-LRGLLKKATPEELVMMHGLLCGETRNT 937
Query: 699 EWRVALATLIEEIQKS 714
E + L+TL+++++ S
Sbjct: 938 ELKEELSTLVDKMEIS 953
>TAIR|locus:2196979 [details] [associations]
symbol:JMJ18 "Jumonji domain-containing protein 18"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=RCA;TAS]
[GO:0032453 "histone demethylase activity (H3-K4 specific)"
evidence=IDA] [GO:0048573 "photoperiodism, flowering" evidence=IMP]
InterPro:IPR003347 InterPro:IPR003888 InterPro:IPR003889
InterPro:IPR004198 Pfam:PF02373 Pfam:PF02928 Pfam:PF05964
Pfam:PF05965 PROSITE:PS51184 PROSITE:PS51542 PROSITE:PS51543
SMART:SM00541 SMART:SM00542 SMART:SM00558 EMBL:CP002684
GO:GO:0005634 GO:GO:0003700 GO:GO:0048573 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 GO:GO:0032453 KO:K11446
IPI:IPI00545873 RefSeq:NP_001185118.1 RefSeq:NP_174367.6
UniGene:At.27326 UniGene:At.74914 ProteinModelPortal:F4I6G4
SMR:F4I6G4 PRIDE:F4I6G4 EnsemblPlants:AT1G30810.1
EnsemblPlants:AT1G30810.2 GeneID:839963 KEGG:ath:AT1G30810
OMA:NCERECF Uniprot:F4I6G4
Length = 819
Score = 784 (281.0 bits), Expect = 1.1e-131, Sum P(2) = 1.1e-131
Identities = 149/228 (65%), Positives = 178/228 (78%)
Query: 7 VTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLAHGQ 66
VTQ SPS+LK EGV Y VVQ+SGE+VLTFPRAYH+GFNCGFNCAEAVNVAPVDWLAHGQ
Sbjct: 361 VTQFSPSILKDEGVQAYRVVQNSGEYVLTFPRAYHAGFNCGFNCAEAVNVAPVDWLAHGQ 420
Query: 67 QAVELYSEQHRKTSLSHDKLLFGSVQAAIKALWELSVLQ-KKTPGNRKWKDACGKDGVLT 125
AVELYS++ RKTSLSHDKLL G+ A+KALWELS + K+ N +WK CGK+G LT
Sbjct: 421 NAVELYSKETRKTSLSHDKLLLGAAYEAVKALWELSASEGKENTTNLRWKSFCGKNGTLT 480
Query: 126 KAIKTRVQMKKEGLQKLP-SYFKLQKMEIDFDLKTERECFSCFYDLHLSAAGCKCSPDRF 184
AI+ R+QM++ + L L+KME DFD ERECFSCFYDLHLSA+GCKCSP+ +
Sbjct: 481 NAIQARLQMEEGRITALGRDSSSLKKMEKDFDSNCERECFSCFYDLHLSASGCKCSPEEY 540
Query: 185 ACLKHANIFCSCEIDHRFVILRYSTDELNTLVEALEGGLDALKELASK 232
ACLKHA+ CSC++ F++LRY+ DEL++LV ALEG D LK ASK
Sbjct: 541 ACLKHADDLCSCDVKDGFILLRYTMDELSSLVRALEGESDDLKIWASK 588
Score = 528 (190.9 bits), Expect = 1.1e-131, Sum P(2) = 1.1e-131
Identities = 121/267 (45%), Positives = 162/267 (60%)
Query: 386 EQDTMQVRSDCNSSNSHKDPNKDQPSCSRVIEGTCSFDVKKL-FGVDLSLPHQQSKLPLV 444
E D +++ + H D +DQ S VI +DL + +Q+
Sbjct: 578 ESDDLKIWASKVLGIEHSD--EDQTKTSSVISEEKKLKEGSFDLNIDLEMDYQE------ 629
Query: 445 DFLKTDTINGSNVRTSVTDQRFQKKLETCVEPINFGCVMCGKLWCSKQAIFPKGFRSRVN 504
D + + +G + S + L VEPIN G ++ GKLWC+K AIFPKGFRSRV
Sbjct: 630 DVKEEASTSGGELTAS-------ENLGVSVEPINLGFLIFGKLWCNKYAIFPKGFRSRVK 682
Query: 505 FYSVLNPEKVCNYISEVLDAGLLGPLFKVTLEECPSETFVNVSAQKCWEMVLQRLNQEIE 564
FY+VL+P ++ NYISEVLDAGL+GPLF+VTLEE P E+F NVSAQ+CWEMV++R+ +
Sbjct: 683 FYNVLDPTRMSNYISEVLDAGLMGPLFRVTLEESPDESFFNVSAQQCWEMVMRRVK---D 739
Query: 565 RQGGLHERGLPHPQSLQSIDGLEMFGFLSSPIIQAIEALDPNHLCMEYWNHKLLTFGKTT 624
L GLP +SI+GL+MFGFLS I+QAIEALDPNH +EYWNHK +T+
Sbjct: 740 TSTSL---GLPILPQFESINGLQMFGFLSPSIVQAIEALDPNHRLVEYWNHK----NQTS 792
Query: 625 EVNKNSSSGLSCSEAETKSKIFGVALM 651
+K+ +CS + TK K+FGV LM
Sbjct: 793 SDSKDHFISSNCSASLTKGKLFGVDLM 819
Score = 52 (23.4 bits), Expect = 1.9e-81, Sum P(2) = 1.9e-81
Identities = 28/83 (33%), Positives = 43/83 (51%)
Query: 289 VSSEVVQSEPQRGTSGLSASHVSVNSHNEGNDETQ---VMNKKAKVKHEVCIDLNMDVIP 345
+SS V E + + AS V H++ D+T+ V++++ K+K E DLN+D+
Sbjct: 568 LSSLVRALEGESDDLKIWASKVLGIEHSD-EDQTKTSSVISEEKKLK-EGSFDLNIDLEM 625
Query: 346 DGNES-KLLLSDSHGK-EAIENL 366
D E K S S G+ A ENL
Sbjct: 626 DYQEDVKEEASTSGGELTASENL 648
Score = 46 (21.3 bits), Expect = 8.3e-81, Sum P(2) = 8.3e-81
Identities = 11/28 (39%), Positives = 16/28 (57%)
Query: 643 SKIFGVALMDEDQNSPSGQNSVEEEAQL 670
SK+ G+ DEDQ S + + EE +L
Sbjct: 587 SKVLGIEHSDEDQTKTS--SVISEEKKL 612
>TAIR|locus:2025635 [details] [associations]
symbol:PKDM7D species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=RCA;TAS]
[GO:0006486 "protein glycosylation" evidence=RCA] [GO:0009630
"gravitropism" evidence=RCA] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0010413 "glucuronoxylan metabolic process" evidence=RCA]
[GO:0016926 "protein desumoylation" evidence=RCA] [GO:0043687
"post-translational protein modification" evidence=RCA] [GO:0045492
"xylan biosynthetic process" evidence=RCA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0050665 "hydrogen peroxide biosynthetic process" evidence=RCA]
InterPro:IPR003347 InterPro:IPR003888 InterPro:IPR003889
InterPro:IPR004198 Pfam:PF02373 Pfam:PF02928 Pfam:PF05964
Pfam:PF05965 PROSITE:PS51184 PROSITE:PS51542 PROSITE:PS51543
SMART:SM00541 SMART:SM00542 SMART:SM00558 EMBL:CP002684
GO:GO:0005634 GO:GO:0003700 InterPro:IPR003349 PROSITE:PS51183
Pfam:PF02375 SMART:SM00545 eggNOG:NOG327026 KO:K11446 EMBL:AB493442
IPI:IPI00545403 RefSeq:NP_001184940.1 RefSeq:NP_172338.4
UniGene:At.26858 ProteinModelPortal:C0SUT9 PaxDb:C0SUT9
PRIDE:C0SUT9 EnsemblPlants:AT1G08620.1 EnsemblPlants:AT1G08620.2
GeneID:837384 KEGG:ath:AT1G08620 TAIR:At1g08620 OMA:GMNELET
PhylomeDB:C0SUT9 ProtClustDB:CLSN2722602 Genevestigator:C0SUT9
Uniprot:C0SUT9
Length = 1209
Score = 714 (256.4 bits), Expect = 7.9e-119, Sum P(3) = 7.9e-119
Identities = 134/249 (53%), Positives = 174/249 (69%)
Query: 7 VTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLAHGQ 66
VTQLSPS LK GVPV+ VQH+GEFVLTFPRAYH+GFN GFNCAEAVNVAPVDWL HGQ
Sbjct: 461 VTQLSPSKLKTAGVPVHRCVQHAGEFVLTFPRAYHAGFNSGFNCAEAVNVAPVDWLPHGQ 520
Query: 67 QAVELYSEQHRKTSLSHDKLLFGSVQAAIKALWELSVLQKKTPGNRKWKDACGKDGVLTK 126
A+ELY +Q RKTS+SHDKLL G+ + +KA WEL++L+K T N +WK KDG+L K
Sbjct: 521 IAIELYCQQGRKTSISHDKLLLGAAREVVKADWELNLLRKNTVDNLRWKAFSAKDGILAK 580
Query: 127 AIKTRVQMKKEGLQKLPSYFKLQKMEIDFDLKTERECFSCFYDLHLSAAGCKCSPDRFAC 186
+K R+ M++ + L + KM +FD EREC CF+DLHLSAAGC+CSP++++C
Sbjct: 581 TLKARIDMERTRREFLCNSSLALKMHSNFDATNERECCICFFDLHLSAAGCRCSPEKYSC 640
Query: 187 LKHANIFCSCEIDHRFVILRYSTDELNTLVEALEGGLDALKELASKNFKWADCSDTDGGL 246
L H CSC ++ + RY DELN LVEA+EG L ++ A ++ A +D G
Sbjct: 641 LTHVKELCSCPWVTKYFLFRYDIDELNVLVEAVEGKLSSVYRWARQDLGLALSTDVSGSK 700
Query: 247 VKMDMESEV 255
+++D E +V
Sbjct: 701 MEIDEEGKV 709
Score = 474 (171.9 bits), Expect = 7.9e-119, Sum P(3) = 7.9e-119
Identities = 106/245 (43%), Positives = 152/245 (62%)
Query: 468 KKLETCVEPINFGCVMCGKLWCSKQAIFPKGFRSRVNFYSVLNPEKVCNYISEVLDAGLL 527
+++ VEP+++GCV+ GK WCS++AIFPKGFRSRV + ++L+P +C YISE+LDAG
Sbjct: 976 RRINCNVEPLSYGCVLSGKSWCSRRAIFPKGFRSRVKYINILDPTNMCFYISEILDAGRN 1035
Query: 528 GPLFKVTLEECPSETFVNVSAQKCWEMVLQRLNQEIERQGGLHERGLPHPQSLQSIDGLE 587
PLF V LE PSE FV++S +CWEMV +R+NQEI +Q + LP Q S DG E
Sbjct: 1036 SPLFMVYLESNPSEVFVHMSPTRCWEMVRERVNQEITKQHKAGKSDLPPLQPSGSPDGFE 1095
Query: 588 MFGFLSSPIIQAIEALDPNHLCMEYWNHKLLTFGKTTEVNKNSSSGLSCSEAETKSKIFG 647
MFG+ S I+QAIEALD N +C +YW+ + + + +V ++ L + +S +
Sbjct: 1096 MFGYSSPAIVQAIEALDVNRVCTDYWDSR--PYSRP-QVQFPANPLLREANTSGRSNVGN 1152
Query: 648 VALMDEDQNSPSGQNSVEEEAQLVLRGLFQKASPKELKVMQRILYSEGRSDEWRVALATL 707
+ L SP+G NS+ L+ LF+KAS +EL +Q +L SE SD + +
Sbjct: 1153 LQLNPGHHISPTGINSI-------LKVLFKKASMEELSSLQEVL-SETNSD---MVTELV 1201
Query: 708 IEEIQ 712
EEIQ
Sbjct: 1202 KEEIQ 1206
Score = 41 (19.5 bits), Expect = 7.9e-119, Sum P(3) = 7.9e-119
Identities = 14/56 (25%), Positives = 23/56 (41%)
Query: 278 EGNGPCCSRSHVSSEVVQSEPQRGTSGLSASHVSVNSHNEGNDETQVMNKKAKVKH 333
EG+ +R+ +S + R S SH VN+ G + + N+ A H
Sbjct: 866 EGDSLRDTRNTISLPTNDQKTMRRDVPSSTSHAEVNAEATGLTQ-DICNRMATNSH 920
>TAIR|locus:2044697 [details] [associations]
symbol:MEE27 "maternal effect embryo arrest 27"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA;TAS] [GO:0009793 "embryo development
ending in seed dormancy" evidence=IMP] [GO:0009555 "pollen
development" evidence=IMP] InterPro:IPR003347 InterPro:IPR003888
InterPro:IPR003889 InterPro:IPR004198 Pfam:PF02373 Pfam:PF02928
Pfam:PF05964 Pfam:PF05965 PROSITE:PS51184 PROSITE:PS51542
PROSITE:PS51543 SMART:SM00541 SMART:SM00542 SMART:SM00558
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009555
GO:GO:0003700 GO:GO:0009793 EMBL:AC004238 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 eggNOG:NOG327026
HOGENOM:HOG000241335 KO:K11446 IPI:IPI00542103 PIR:T00470
RefSeq:NP_181034.1 UniGene:At.53035 ProteinModelPortal:O64752
SMR:O64752 EnsemblPlants:AT2G34880.1 GeneID:818053
KEGG:ath:AT2G34880 TAIR:At2g34880 InParanoid:O64752 OMA:DICSCEG
PhylomeDB:O64752 ProtClustDB:CLSN2683666 ArrayExpress:O64752
Genevestigator:O64752 Uniprot:O64752
Length = 806
Score = 707 (253.9 bits), Expect = 6.0e-116, Sum P(2) = 6.0e-116
Identities = 149/273 (54%), Positives = 187/273 (68%)
Query: 3 LVEQVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWL 62
L E VTQ SP++LK EGVPVY VQ++GE+VLTFPRAYHSGFNCGFNCAEAVNVAPVDWL
Sbjct: 357 LHELVTQFSPTILKNEGVPVYRAVQNAGEYVLTFPRAYHSGFNCGFNCAEAVNVAPVDWL 416
Query: 63 AHGQQAVELYSEQHRKTSLSHDKLLFGSVQAAIKALWELSVLQKKTPGNRKWKDACGKDG 122
AHGQ AVE+YS++ RKTSLSHDK+L G AA +A+ LS + WK CGKDG
Sbjct: 417 AHGQNAVEIYSQETRKTSLSHDKILLG---AAFEAVKSLSAHGEDNTKRFSWKRFCGKDG 473
Query: 123 VLTKAIKTRVQMKKEGLQKLPSYFKLQKMEIDFDLKTERECFSCFYDLHLSAAGCK-CSP 181
++TKAI+ R++M+++ ++ L + F L KM+ DFD EREC SCF DLHLSA GCK CS
Sbjct: 474 IITKAIEARLRMEEKRIEALGNGFSLVKMDKDFDSNCERECISCFSDLHLSATGCKNCSS 533
Query: 182 -DRFACLKHANIFCSCEIDHRFVILRYSTDELNTLVEALEGGLDALKELASKNFKWADCS 240
+ + C KH CSCE RF+ LRY+ DEL++LV ALEG D LK SK + CS
Sbjct: 534 LEEYGCTKHD--ICSCEGKDRFIFLRYTIDELSSLVRALEGESDDLKAWLSKVME--GCS 589
Query: 241 DTDGG-----LVK-MDMESEVFPM--DCCEQKE 265
+T G +VK ++ E F + +C + E
Sbjct: 590 ETQKGESSGIIVKEKQVQEECFDLNGECNKSSE 622
Score = 456 (165.6 bits), Expect = 6.0e-116, Sum P(2) = 6.0e-116
Identities = 93/177 (52%), Positives = 124/177 (70%)
Query: 474 VEPINFGCVMCGKLWCSKQAIFPKGFRSRVNFYSVLNPEKVCNYISEVLDAGLLGPLFKV 533
VEPIN G ++ GKLWC+K AIFPKGF+SRV FY+V +P ++ Y+SE++DAGLLGPLFKV
Sbjct: 637 VEPINLGFLVVGKLWCNKHAIFPKGFKSRVKFYNVQDPMRISYYVSEIVDAGLLGPLFKV 696
Query: 534 TLEECPSETFVNVSAQKCWEMVLQRLNQEIERQGGLHERGLPHPQSLQSIDGLEMFGFLS 593
TLEE E+F S QKCWEMVL R+ +EI R+ +++ H L+SIDGL+MFGF S
Sbjct: 697 TLEESQDESFSYASPQKCWEMVLLRVKEEIMRRS--NQKQDVH--MLESIDGLKMFGFRS 752
Query: 594 SPIIQAIEALDPNHLCMEYWNHKLLTFGKTTEVNKNSSSGLSCSEAETKSKIFGVAL 650
I+QA EALDPNH +EYWNHK + + + S++ +K+++FGV L
Sbjct: 753 PFIVQATEALDPNHGQVEYWNHK----NEKDSLEMKDCFMSNSSQSLSKARLFGVDL 805
Score = 41 (19.5 bits), Expect = 1.1e-40, Sum P(3) = 1.1e-40
Identities = 10/22 (45%), Positives = 14/22 (63%)
Query: 414 RVIEGTCSFDVKKLFGVDLSLP 435
R+IE + +VK L+G DL P
Sbjct: 220 RIIEKETN-EVKVLYGTDLENP 240
Score = 40 (19.1 bits), Expect = 1.1e-40, Sum P(3) = 1.1e-40
Identities = 17/59 (28%), Positives = 29/59 (49%)
Query: 104 LQKKTPGNRKWKDAC--------GKDGVLTKAIKTRVQMKKE--GLQKLPSYFKLQKME 152
++KKTP RK K ++G ++K++ T ++E G + P F L+K E
Sbjct: 132 VKKKTPKGRKRKRGKYSRTVAPKKRNGSVSKSVSTPKATEEENFGFESGPE-FTLEKFE 189
Score = 38 (18.4 bits), Expect = 7.6e-72, Sum P(2) = 7.6e-72
Identities = 24/117 (20%), Positives = 48/117 (41%)
Query: 317 EGNDETQVMNKKAKVKHEVCIDLNMDVIPDGNESKLLLSDSHGKEAIENLKAHLSACYQE 376
E DE+ K V + + +++ N+ + D H E+I+ LK ++
Sbjct: 700 ESQDESFSYASPQKCWEMVLLRVKEEIMRRSNQKQ----DVHMLESIDGLKMF---GFRS 752
Query: 377 KVLCSGTVKEQDTMQVRSDCNSSNSHKDPNKDQPSCSRVIEGTCSFDVKKLFGVDLS 433
+ T + D + + + + KD + + C + + S +LFGVDL+
Sbjct: 753 PFIVQAT-EALDPNHGQVEYWNHKNEKD-SLEMKDCF-MSNSSQSLSKARLFGVDLN 806
>TAIR|locus:2064910 [details] [associations]
symbol:AT2G38950 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA;TAS] [GO:0006486 "protein
glycosylation" evidence=RCA] [GO:0006487 "protein N-linked
glycosylation" evidence=RCA] [GO:0043687 "post-translational
protein modification" evidence=RCA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=RCA]
InterPro:IPR003347 InterPro:IPR004198 Pfam:PF02373 Pfam:PF02928
PROSITE:PS51184 SMART:SM00558 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0003700 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 HOGENOM:HOG000241335
KO:K11446 EMBL:AY127026 EMBL:BT001088 IPI:IPI00539605
RefSeq:NP_181429.2 UniGene:At.37227 ProteinModelPortal:Q8L7T6
SMR:Q8L7T6 PRIDE:Q8L7T6 EnsemblPlants:AT2G38950.1 GeneID:818480
KEGG:ath:AT2G38950 TAIR:At2g38950 eggNOG:NOG308887
InParanoid:Q8L7T6 OMA:FDCGFNC PhylomeDB:Q8L7T6
ProtClustDB:CLSN2918209 Genevestigator:Q8L7T6 Uniprot:Q8L7T6
Length = 708
Score = 536 (193.7 bits), Expect = 1.2e-51, P = 1.2e-51
Identities = 100/231 (43%), Positives = 146/231 (63%)
Query: 7 VTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLAHGQ 66
V +SP L EG+PV VQH G++V+ FP +Y+S F+CGFNC E N AP+DWL HG
Sbjct: 388 VMMMSPYQLSVEGIPVTRCVQHPGQYVIIFPGSYYSAFDCGFNCLEKANFAPLDWLPHGD 447
Query: 67 QAVELYSEQHRKTSLSHDKLLFGSVQAAIKALWELSVLQKKTPGNRKWKDACGKDGVLTK 126
AV++ E + + +S+DKLLF + + A+K L E + +K T +W D+CG DG+ +
Sbjct: 448 IAVQVNQEMSKTSLISYDKLLFSAAREAVKCLKEYGLSKKNTACYTRWNDSCGTDGLFSN 507
Query: 127 AIKTRVQMKKEGLQKLPSYFKLQKMEIDFDLKTERECFSCFYDLHLSAAGCKCSPDRFAC 186
IK+R++++K + L S + Q+M+ +D +REC C DL+LSA C CS +R++C
Sbjct: 508 IIKSRIKLEKNRREFLISSLESQRMDKSYDAVNKRECCVCLGDLYLSAVNCSCSANRYSC 567
Query: 187 LKHANIFCSCEIDHRFVILRYSTDELNTLVEALEGGLDALKELASKNFKWA 237
L H C+C D + + RY+ DELN LVEALEG K+L+S F+WA
Sbjct: 568 LNHMRKLCACPCDRKSFLYRYTMDELNLLVEALEG-----KKLSSM-FRWA 612
>TAIR|locus:2031290 [details] [associations]
symbol:AT1G63490 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016706 "oxidoreductase activity, acting
on paired donors, with incorporation or reduction of molecular
oxygen, 2-oxoglutarate as one donor, and incorporation of one atom
each of oxygen into both donors" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0000278 "mitotic cell cycle" evidence=RCA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=RCA] [GO:0006396 "RNA processing" evidence=RCA]
[GO:0010228 "vegetative to reproductive phase transition of
meristem" evidence=RCA] [GO:0010413 "glucuronoxylan metabolic
process" evidence=RCA] [GO:0016926 "protein desumoylation"
evidence=RCA] [GO:0045492 "xylan biosynthetic process"
evidence=RCA] [GO:0050665 "hydrogen peroxide biosynthetic process"
evidence=RCA] InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 Pfam:PF02373 Pfam:PF02928
Pfam:PF08429 PROSITE:PS51184 SMART:SM00249 SMART:SM00558
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 GO:GO:0003700 GO:GO:0016706 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 eggNOG:NOG327026 KO:K11446
EMBL:AY039958 EMBL:BT011572 IPI:IPI00545053 RefSeq:NP_564814.1
UniGene:At.22811 ProteinModelPortal:Q94BQ7 SMR:Q94BQ7 PRIDE:Q94BQ7
EnsemblPlants:AT1G63490.1 GeneID:842655 KEGG:ath:AT1G63490
TAIR:At1g63490 HOGENOM:HOG000084215 InParanoid:Q94BQ7 OMA:WAGSEMD
PhylomeDB:Q94BQ7 ProtClustDB:CLSN2689007 ArrayExpress:Q94BQ7
Genevestigator:Q94BQ7 Uniprot:Q94BQ7
Length = 1116
Score = 321 (118.1 bits), Expect = 2.3e-24, Sum P(2) = 2.3e-24
Identities = 80/224 (35%), Positives = 115/224 (51%)
Query: 3 LVEQVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWL 62
L + VT LSP+VL+ VPVY V+Q G FV+TFP+++H+GFN G NCAEAVN A DWL
Sbjct: 129 LFQLVTMLSPTVLQENKVPVYTVLQEPGNFVITFPKSFHAGFNFGLNCAEAVNFATADWL 188
Query: 63 AHGQQAVELYSEQHRKTSLSHDKLLFGSVQAAIKALWELSVLQKKTPGNRKWKDACGKD- 121
+G ELY + + +SH++LL V+ K N + K+
Sbjct: 189 PYGGSGAELYRLYRKPSVISHEELL--------------CVVAKGNCCNNEGSIHLKKEL 234
Query: 122 -GVLTKAIKTRVQMKKEGLQKLPSYFKLQKMEIDFDLKTERECFSCFYDLHLSAAGCKCS 180
+ +K R Q+ K G+ + F + + ++ + C C LHLSA C C
Sbjct: 235 LRIYSKEKTWREQLWKSGILRSSPMF-VPECADSVGIEEDPTCIICQQFLHLSAIVCNCR 293
Query: 181 PDRFACLKHANIFCSCEIDHRFVILRYSTDELNTLVEALE--GG 222
P FACL+H C CE + RY+ EL+ +V+ +E GG
Sbjct: 294 PSVFACLEHWKHLCECEPTKLRLEYRYTLAELDMMVQEVEKFGG 337
Score = 43 (20.2 bits), Expect = 2.3e-24, Sum P(2) = 2.3e-24
Identities = 11/38 (28%), Positives = 18/38 (47%)
Query: 260 CCEQKESSSSSPRVENIVEGNGPCCSRSHVSSEVVQSE 297
CC+ SSSSP E + + P S H+ + + +
Sbjct: 902 CCKTITLSSSSPTSELLEDVGKP--SLQHIQQHLKEGQ 937
>ZFIN|ZDB-GENE-030424-1 [details] [associations]
symbol:kdm5bb "lysine (K)-specific demethylase 5Bb"
species:7955 "Danio rerio" [GO:0016706 "oxidoreductase activity,
acting on paired donors, with incorporation or reduction of
molecular oxygen, 2-oxoglutarate as one donor, and incorporation of
one atom each of oxygen into both donors" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0034648 "histone demethylase activity
(H3-dimethyl-K4 specific)" evidence=ISS] [GO:0034720 "histone H3-K4
demethylation" evidence=ISS] [GO:0034647 "histone demethylase
activity (H3-trimethyl-K4 specific)" evidence=ISS] [GO:0016702
"oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249
SMART:SM00501 SMART:SM00558 ZFIN:ZDB-GENE-030424-1 GO:GO:0005634
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 EMBL:CABZ01042196 EMBL:BX664742
Ensembl:ENSDART00000005583 Bgee:G1K2I1 Uniprot:G1K2I1
Length = 1522
Score = 240 (89.5 bits), Expect = 3.2e-24, Sum P(2) = 3.2e-24
Identities = 45/85 (52%), Positives = 60/85 (70%)
Query: 3 LVEQVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWL 62
L + VT ++P+ L A GVP+Y Q +GEFV+TFPR+YHSGFN GFN AEAVN VDW+
Sbjct: 554 LHQLVTIMNPNTLMAHGVPIYRTNQCAGEFVITFPRSYHSGFNQGFNFAEAVNFCTVDWM 613
Query: 63 AHGQQAVELYSEQHRKTSLSHDKLL 87
G+Q V+ Y + HR SHD+++
Sbjct: 614 PLGRQCVDHYRQLHRYCVFSHDEMV 638
Score = 130 (50.8 bits), Expect = 3.2e-24, Sum P(2) = 3.2e-24
Identities = 64/275 (23%), Positives = 118/275 (42%)
Query: 111 NRKWKDACGKDGVLTKAIKTRVQMKKEGLQKLPSYFKLQKMEI------DFDLKT--ERE 162
N K C D VL A++ +Q+ + ++L K++KM + +DL ER+
Sbjct: 640 NMAMKADC-LDVVLASAVQKDMQLMIKEERELRE--KVRKMGVAQCELFQYDLLADDERQ 696
Query: 163 CFSCFYDLHLSAAGCKCSPDRFACLKHANIFCSCEIDHRFVILRYSTDELNTLVEALEGG 222
C C +LSA C C P CL H + CSC I + + R++ D+L +
Sbjct: 697 CVKCRTTCYLSALTCPCRPGVQVCLYHTHDLCSCPISNYTLNYRFTLDDLYPM------- 749
Query: 223 LDALKELASKNFKWADCSDTDGGLVKMDMESEVFPMDCCEQKESSSSSP-----RVENIV 277
++A+++ A WA T+ K+D + V ++ + S P R +V
Sbjct: 750 MNAVRQRAEYYDDWAS-RVTEVMEAKLDKKRNVTVFRTLLEESNEQSFPENDLLRQLRLV 808
Query: 278 EGNGPCCSRSHVSSEVVQSEPQ-RGTSGLSASHVSVNSHNEGNDETQVMNKKAKVKHEVC 336
+ CS V+ +++ + Q R +G + S + + Q+ N +
Sbjct: 809 TQDAEKCSS--VAQQLLNGKRQTRYRTGKAKSPNQLTVEEMRSFVRQLYNLPCSLTQAPL 866
Query: 337 IDLNMDVIPDGNE-SKLLLSDSHGKEAIENLKAHL 370
+ ++ I D + S+ LLSD +A+ +++ L
Sbjct: 867 LKELLNSIEDFQQHSEKLLSDEVSADAVSEIESLL 901
>ZFIN|ZDB-GENE-030131-5379 [details] [associations]
symbol:kdm5ba "lysine (K)-specific demethylase
5Ba" species:7955 "Danio rerio" [GO:0055114 "oxidation-reduction
process" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016706 "oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249
SMART:SM00501 SMART:SM00558 ZFIN:ZDB-GENE-030131-5379 GO:GO:0005634
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 EMBL:CR628365 IPI:IPI00636517
Ensembl:ENSDART00000058729 ArrayExpress:F1R3Y4 Bgee:F1R3Y4
Uniprot:F1R3Y4
Length = 1483
Score = 231 (86.4 bits), Expect = 1.7e-23, Sum P(3) = 1.7e-23
Identities = 45/84 (53%), Positives = 57/84 (67%)
Query: 3 LVEQVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWL 62
L + VT ++P++L GVP+Y Q +GEFV+TFPRAYHSGFN GFN AEAVN DWL
Sbjct: 517 LHQLVTIMNPNLLMEHGVPIYRTNQCAGEFVITFPRAYHSGFNQGFNFAEAVNFCTADWL 576
Query: 63 AHGQQAVELYSEQHRKTSLSHDKL 86
G+Q VE Y +R SHD++
Sbjct: 577 PLGRQCVEHYRSLYRYCVFSHDEM 600
Score = 143 (55.4 bits), Expect = 1.7e-23, Sum P(3) = 1.7e-23
Identities = 38/129 (29%), Positives = 60/129 (46%)
Query: 126 KAIKTRVQMKKEGLQKLPSYFKLQKMEIDFDL--KTERECFSCFYDLHLSAAGCKCSPDR 183
K + +Q +K +K ++D+D+ ER+C C +LSA C CSP++
Sbjct: 621 KDMNAMIQEEKILREKAYKLGMWHSQQVDYDILPDEERQCAKCRTTCYLSAITCPCSPEQ 680
Query: 184 FACLKHANIFCSCEIDHRFVILRYSTDELNTLVEALEGGLDALKELASKNFKWADCSDTD 243
CL H CSC + + +Y+ EL T +AL ++ + ASK K +D D
Sbjct: 681 VVCLHHTQDLCSCPARNYTLNYKYTLAELKTFFQALTARAESYDDWASKVNKILK-ADQD 739
Query: 244 GGLVKMDME 252
K D+E
Sbjct: 740 N---KSDLE 745
Score = 43 (20.2 bits), Expect = 3.3e-14, Sum P(2) = 3.3e-14
Identities = 10/34 (29%), Positives = 16/34 (47%)
Query: 613 WNHKLLTFGKTTEVNKNSSSGLSCSEAETKSKIF 646
W K+ K + NK+ L C AE + K++
Sbjct: 726 WASKVNKILKADQDNKSDLEELRCLLAEAEKKMY 759
Score = 38 (18.4 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 29/126 (23%), Positives = 48/126 (38%)
Query: 211 ELNTLVEALEGGLDALKELASKNFKWADCSDTDGGLVKMDMESEVFPMDCCEQKESSSSS 270
E T +E+L + A KE A+K F + S + + + P CE S S
Sbjct: 1022 EALTRLESLISEVQAWKESAAKTFLLRNSS--------LSLLEVLCPR--CETGSQKSKS 1071
Query: 271 PRVENIVEGNGPCCSRSHVSSEVVQSEPQRGTSGLSASHVSVNS--HNEGNDETQVMNKK 328
+ + EG PC + E TS +AS ++ S H + D ++
Sbjct: 1072 KKAK---EGLVPCKKADVKLDSLFDVEKVLSTSKDTASAMATLSDVHQKELDSLSMLRTS 1128
Query: 329 AKVKHE 334
+ K +
Sbjct: 1129 NESKFQ 1134
Score = 37 (18.1 bits), Expect = 1.7e-23, Sum P(3) = 1.7e-23
Identities = 13/43 (30%), Positives = 20/43 (46%)
Query: 350 SKLLLSDSHGKEAIENLKAHLSACYQEKVLCSGTVKEQDTMQV 392
+K+L +D K +E L+ L+ EK + T D QV
Sbjct: 731 NKILKADQDNKSDLEELRCLLAEA--EKKMYPETDLLNDMRQV 771
>UNIPROTKB|F1NRC4 [details] [associations]
symbol:KDM5B "Lysine-specific demethylase 5B" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0034647 "histone
demethylase activity (H3-trimethyl-K4 specific)" evidence=IEA]
[GO:0034648 "histone demethylase activity (H3-dimethyl-K4
specific)" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0003714 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 GeneTree:ENSGT00530000063118
GO:GO:0034647 IPI:IPI00578699 EMBL:AADN02063991 EMBL:AADN02063988
EMBL:AADN02063989 EMBL:AADN02063990 Ensembl:ENSGALT00000000582
ArrayExpress:F1NRC4 Uniprot:F1NRC4
Length = 1510
Score = 235 (87.8 bits), Expect = 5.9e-23, Sum P(2) = 5.9e-23
Identities = 47/85 (55%), Positives = 58/85 (68%)
Query: 3 LVEQVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWL 62
L + VT ++P+ L A GVPVY Q +GEFV+TFPRAYHSGFN GFN AEAVN VDWL
Sbjct: 512 LHQLVTIMNPNTLMAHGVPVYRTNQCAGEFVITFPRAYHSGFNQGFNFAEAVNFCTVDWL 571
Query: 63 AHGQQAVELYSEQHRKTSLSHDKLL 87
G+Q +E Y R SHD+++
Sbjct: 572 PLGRQCIEHYRLLSRYCVFSHDEMI 596
Score = 123 (48.4 bits), Expect = 5.9e-23, Sum P(2) = 5.9e-23
Identities = 29/99 (29%), Positives = 47/99 (47%)
Query: 133 QMKKEGLQKLPSYFKLQKMEIDFDLKTERECFSCFYDLHLSAAGCKCSPDRFACLKHANI 192
+M +E +QKL +++ + ER+C+ C +SA C C P CL H
Sbjct: 626 KMLREKVQKL-GVTDSERVAFELFPDDERQCYKCKTTCFMSAVYCPCKPGLLVCLYHVED 684
Query: 193 FCSCEIDHRFVILRYSTDELNTLVEALEGGLDALKELAS 231
CSC + RY+ +EL ++ AL+ ++ E AS
Sbjct: 685 LCSCPTYQYKLGYRYTLEELYPMMNALKMRAESYNEWAS 723
Score = 47 (21.6 bits), Expect = 4.9e-15, Sum P(2) = 4.9e-15
Identities = 17/50 (34%), Positives = 24/50 (48%)
Query: 214 TLVEALEGGLDALKELASKNFKWADCSDTDGGL-VKMDMESEVFPMDCCE 262
TL EA ++AL+ L + N CS+ D L V + + PM CE
Sbjct: 1107 TLGEARLKEMEALRSLRAANEGKVLCSEEDAELKVCVCQKEPAAPMIQCE 1156
>UNIPROTKB|F1NUR9 [details] [associations]
symbol:KDM5B "Lysine-specific demethylase 5B" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0034647 "histone
demethylase activity (H3-trimethyl-K4 specific)" evidence=IEA]
[GO:0034648 "histone demethylase activity (H3-dimethyl-K4
specific)" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0003714 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 GeneTree:ENSGT00530000063118
GO:GO:0034647 OMA:CENEKEM EMBL:AADN02063991 EMBL:AADN02063988
EMBL:AADN02063989 EMBL:AADN02063990 IPI:IPI00823098
Ensembl:ENSGALT00000040834 ArrayExpress:F1NUR9 Uniprot:F1NUR9
Length = 1521
Score = 235 (87.8 bits), Expect = 6.0e-23, Sum P(2) = 6.0e-23
Identities = 47/85 (55%), Positives = 58/85 (68%)
Query: 3 LVEQVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWL 62
L + VT ++P+ L A GVPVY Q +GEFV+TFPRAYHSGFN GFN AEAVN VDWL
Sbjct: 523 LHQLVTIMNPNTLMAHGVPVYRTNQCAGEFVITFPRAYHSGFNQGFNFAEAVNFCTVDWL 582
Query: 63 AHGQQAVELYSEQHRKTSLSHDKLL 87
G+Q +E Y R SHD+++
Sbjct: 583 PLGRQCIEHYRLLSRYCVFSHDEMI 607
Score = 123 (48.4 bits), Expect = 6.0e-23, Sum P(2) = 6.0e-23
Identities = 29/99 (29%), Positives = 47/99 (47%)
Query: 133 QMKKEGLQKLPSYFKLQKMEIDFDLKTERECFSCFYDLHLSAAGCKCSPDRFACLKHANI 192
+M +E +QKL +++ + ER+C+ C +SA C C P CL H
Sbjct: 637 KMLREKVQKL-GVTDSERVAFELFPDDERQCYKCKTTCFMSAVYCPCKPGLLVCLYHVED 695
Query: 193 FCSCEIDHRFVILRYSTDELNTLVEALEGGLDALKELAS 231
CSC + RY+ +EL ++ AL+ ++ E AS
Sbjct: 696 LCSCPTYQYKLGYRYTLEELYPMMNALKMRAESYNEWAS 734
Score = 47 (21.6 bits), Expect = 5.0e-15, Sum P(2) = 5.0e-15
Identities = 17/50 (34%), Positives = 24/50 (48%)
Query: 214 TLVEALEGGLDALKELASKNFKWADCSDTDGGL-VKMDMESEVFPMDCCE 262
TL EA ++AL+ L + N CS+ D L V + + PM CE
Sbjct: 1118 TLGEARLKEMEALRSLRAANEGKVLCSEEDAELKVCVCQKEPAAPMIQCE 1167
>UNIPROTKB|Q5F3R2 [details] [associations]
symbol:KDM5B "Lysine-specific demethylase 5B" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0034721 "histone H3-K4 demethylation,
trimethyl-H3-K4-specific" evidence=ISS] [GO:0034720 "histone H3-K4
demethylation" evidence=ISS] [GO:0034647 "histone demethylase
activity (H3-trimethyl-K4 specific)" evidence=ISS] [GO:0034648
"histone demethylase activity (H3-dimethyl-K4 specific)"
evidence=ISS] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0006351 GO:GO:0016706 GO:GO:0016702
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 eggNOG:NOG327026
GO:GO:0034647 KO:K11446 HOGENOM:HOG000290719 EMBL:AJ851588
IPI:IPI00578699 RefSeq:NP_001026200.1 UniGene:Gga.7752 HSSP:Q14839
ProteinModelPortal:Q5F3R2 SMR:Q5F3R2 GeneID:421168 KEGG:gga:421168
CTD:10765 InParanoid:Q5F3R2 OrthoDB:EOG4HT8RC NextBio:20823981
Uniprot:Q5F3R2
Length = 1522
Score = 235 (87.8 bits), Expect = 6.0e-23, Sum P(2) = 6.0e-23
Identities = 47/85 (55%), Positives = 58/85 (68%)
Query: 3 LVEQVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWL 62
L + VT ++P+ L A GVPVY Q +GEFV+TFPRAYHSGFN GFN AEAVN VDWL
Sbjct: 524 LHQLVTIMNPNTLMAHGVPVYRTNQCAGEFVITFPRAYHSGFNQGFNFAEAVNFCTVDWL 583
Query: 63 AHGQQAVELYSEQHRKTSLSHDKLL 87
G+Q +E Y R SHD+++
Sbjct: 584 PLGRQCIEHYRLLSRYCVFSHDEMI 608
Score = 123 (48.4 bits), Expect = 6.0e-23, Sum P(2) = 6.0e-23
Identities = 29/99 (29%), Positives = 47/99 (47%)
Query: 133 QMKKEGLQKLPSYFKLQKMEIDFDLKTERECFSCFYDLHLSAAGCKCSPDRFACLKHANI 192
+M +E +QKL +++ + ER+C+ C +SA C C P CL H
Sbjct: 638 KMLREKVQKL-GVTDSERVAFELFPDDERQCYKCKTTCFMSAVYCPCKPGLLVCLYHVED 696
Query: 193 FCSCEIDHRFVILRYSTDELNTLVEALEGGLDALKELAS 231
CSC + RY+ +EL ++ AL+ ++ E AS
Sbjct: 697 LCSCPTYQYKLGYRYTLEELYPMMNALKMRAESYNEWAS 735
Score = 47 (21.6 bits), Expect = 5.0e-15, Sum P(2) = 5.0e-15
Identities = 17/50 (34%), Positives = 24/50 (48%)
Query: 214 TLVEALEGGLDALKELASKNFKWADCSDTDGGL-VKMDMESEVFPMDCCE 262
TL EA ++AL+ L + N CS+ D L V + + PM CE
Sbjct: 1119 TLGEARLKEMEALRSLRAANEGKVLCSEEDAELKVCVCQKEPAAPMIQCE 1168
>UNIPROTKB|I3L8V3 [details] [associations]
symbol:KDM5A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0019907 "cyclin-dependent protein
kinase activating kinase holoenzyme complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0016706 "oxidoreductase activity, acting
on paired donors, with incorporation or reduction of molecular
oxygen, 2-oxoglutarate as one donor, and incorporation of one atom
each of oxygen into both donors" evidence=IEA] InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 Pfam:PF02373 Pfam:PF02928
Pfam:PF08429 PROSITE:PS51184 SMART:SM00558 GO:GO:0005634
GO:GO:0016706 GeneTree:ENSGT00530000063118 EMBL:FP102715
Ensembl:ENSSSCT00000023353 Uniprot:I3L8V3
Length = 583
Score = 294 (108.6 bits), Expect = 9.0e-23, P = 9.0e-23
Identities = 103/367 (28%), Positives = 166/367 (45%)
Query: 3 LVEQVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWL 62
L + VT ++P+VL GVPVY Q +GEFV+TFPRAYHSGFN G+N AEAVN DWL
Sbjct: 150 LHQLVTIMNPNVLMEHGVPVYRTNQCAGEFVVTFPRAYHSGFNQGYNFAEAVNFCTADWL 209
Query: 63 AHGQQAVELYSEQHRKTSLSHDKLLFGSVQAAIKALWELSVLQKKTPGNRKWKDACGKDG 122
G+Q V Y R SH++L+F AA ++ + C +
Sbjct: 210 PIGRQCVNHYRRLRRHCVFSHEELIFK--MAADPECLDVGLAAM----------VCKELT 257
Query: 123 VLTKAIKTRVQMKKEGLQKLPSYFKLQKMEIDFDLKTERECFSCFYDLHLSAAGCKCSPD 182
++T+ +TR++ + L S ++ ++ D ER+C +C LSA C C+P+
Sbjct: 258 LMTEE-ETRLRESVVQMGVLMSEEEVFELVPD----DERQCSACRTTCFLSALTCSCNPE 312
Query: 183 RFACLKHANIFCSCEIDHRFVILRYSTDELNTLVEALEGGLDALKELASKNFKWADCSDT 242
R CL H C C + + + RY ++L +L+ ++ + S+ + S
Sbjct: 313 RLVCLYHPTDLCPCPMQKKCLRYRYPLEDLPSLLYGVKVRAQSYDTWVSRVTEALSASFN 372
Query: 243 DGGLVKMDM-ESEVFPMDCCEQKESSSSSPR-VENIVEGNGPCCSRSHVSSEVVQSEPQR 300
K D+ E V D ++K + R + + V+ C S + + Q Q
Sbjct: 373 H----KKDLIELRVMLEDAEDRKYPENDLFRQLRDAVKEAETCASVAQLLLSKKQKHRQS 428
Query: 301 GTSGLSASHVSVNSHNEG-----------NDETQVMNKKAKVK--HEVCIDLNMDVIPDG 347
SG + + ++V + QV N V+ HE + MD PD
Sbjct: 429 PDSGRTRTKLTVEELKAFVQQLFSLPCVISQARQVKNLLDDVEEFHERAQEAMMDETPDS 488
Query: 348 NESKLLL 354
++ ++L+
Sbjct: 489 SKLQMLI 495
>UNIPROTKB|B3KV94 [details] [associations]
symbol:JARID1B "cDNA FLJ16281 fis, clone NT2RI3003104,
highly similar to Homo sapiens Jumonji, AT rich interactive domain
1B (RBP2-like) (JARID1B), mRNA" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0032453 "histone demethylase activity (H3-K4 specific)"
evidence=IEA] InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 EMBL:CH471067 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0032453
HOGENOM:HOG000290719 EMBL:AC098934 EMBL:AC104463 UniGene:Hs.443650
HGNC:HGNC:18039 ChiTaRS:KDM5B HOVERGEN:HBG068574 EMBL:AK122752
IPI:IPI00877939 SMR:B3KV94 STRING:B3KV94 Ensembl:ENST00000235790
Uniprot:B3KV94
Length = 1275
Score = 233 (87.1 bits), Expect = 1.7e-22, Sum P(2) = 1.7e-22
Identities = 47/85 (55%), Positives = 57/85 (67%)
Query: 3 LVEQVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWL 62
L + VT ++P+ L VPVY Q +GEFV+TFPRAYHSGFN GFN AEAVN VDWL
Sbjct: 391 LHQLVTIMNPNTLMTHEVPVYRTNQCAGEFVITFPRAYHSGFNQGFNFAEAVNFCTVDWL 450
Query: 63 AHGQQAVELYSEQHRKTSLSHDKLL 87
G+Q VE Y HR SHD+++
Sbjct: 451 PLGRQCVEHYRLLHRYCVFSHDEMI 475
Score = 119 (46.9 bits), Expect = 1.7e-22, Sum P(2) = 1.7e-22
Identities = 27/96 (28%), Positives = 47/96 (48%)
Query: 136 KEGLQKLPSYFKLQKMEIDFDLKTERECFSCFYDLHLSAAGCKCSPDRFACLKHANIFCS 195
+E ++KL ++M+ + ER+C C +SA C C P CL H CS
Sbjct: 508 RETVRKL-GVIDSERMDFELLPDDERQCVKCKTTCFMSAISCSCKPGLLVCLHHVKELCS 566
Query: 196 CEIDHRFVI-LRYSTDELNTLVEALEGGLDALKELA 230
C +++ + RY+ D+L ++ AL+ ++ E A
Sbjct: 567 CP-PYKYKLRYRYTLDDLYPMMNALKLRAESYNEWA 601
>UNIPROTKB|F1S4N3 [details] [associations]
symbol:KDM5B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0034648 "histone demethylase
activity (H3-dimethyl-K4 specific)" evidence=IEA] [GO:0034647
"histone demethylase activity (H3-trimethyl-K4 specific)"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0003714 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 GO:GO:0034647 OMA:CENEKEM
EMBL:CU986276 Ensembl:ENSSSCT00000011960 Uniprot:F1S4N3
Length = 1304
Score = 233 (87.1 bits), Expect = 1.8e-22, Sum P(2) = 1.8e-22
Identities = 47/85 (55%), Positives = 57/85 (67%)
Query: 3 LVEQVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWL 62
L + VT ++P+ L VPVY Q +GEFV+TFPRAYHSGFN GFN AEAVN VDWL
Sbjct: 548 LHQLVTIMNPNTLMTHQVPVYRTNQCAGEFVITFPRAYHSGFNQGFNFAEAVNFCTVDWL 607
Query: 63 AHGQQAVELYSEQHRKTSLSHDKLL 87
G+Q VE Y HR SHD+++
Sbjct: 608 PLGRQCVEHYRLLHRYCVFSHDEMI 632
Score = 119 (46.9 bits), Expect = 1.8e-22, Sum P(2) = 1.8e-22
Identities = 27/96 (28%), Positives = 47/96 (48%)
Query: 136 KEGLQKLPSYFKLQKMEIDFDLKTERECFSCFYDLHLSAAGCKCSPDRFACLKHANIFCS 195
+E ++KL ++M+ + ER+C C +SA C C P CL H CS
Sbjct: 665 RETVRKL-GVIDSERMDFELLPDDERQCVKCKTTCFMSAISCSCKPGLLVCLHHVKELCS 723
Query: 196 CEIDHRFVI-LRYSTDELNTLVEALEGGLDALKELA 230
C +++ + RY+ D+L ++ AL+ ++ E A
Sbjct: 724 CP-PYKYKLRYRYTLDDLYPMMNALKLRAESYNEWA 758
Score = 37 (18.1 bits), Expect = 6.1e-14, Sum P(2) = 6.1e-14
Identities = 17/80 (21%), Positives = 37/80 (46%)
Query: 82 SHDKLLFGSVQAAIKALWELSVLQKKTPGNRKWKDACGKDGVLTKAIKTRVQMKKEGLQK 141
SH++L ++ + L+ L + +TP KD +L + + +K ++
Sbjct: 832 SHNQLTVNELRQFVTQLYALPCVLSQTP---LLKD------LLNRVEDFQQHSQKLLSEE 882
Query: 142 LPSYFKLQKM-EIDFDLKTE 160
+PS +LQ + ++ F+ E
Sbjct: 883 MPSAAELQDLLDVSFEFDVE 902
>UNIPROTKB|F1PJS3 [details] [associations]
symbol:KDM5B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
GeneTree:ENSGT00530000063118 OMA:CENEKEM EMBL:AAEX03004965
Ensembl:ENSCAFT00000016655 Uniprot:F1PJS3
Length = 1476
Score = 233 (87.1 bits), Expect = 1.9e-22, Sum P(2) = 1.9e-22
Identities = 47/85 (55%), Positives = 57/85 (67%)
Query: 3 LVEQVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWL 62
L + VT ++P+ L VPVY Q +GEFV+TFPRAYHSGFN GFN AEAVN VDWL
Sbjct: 481 LHQLVTIMNPNTLMTHEVPVYRTNQCAGEFVITFPRAYHSGFNQGFNFAEAVNFCTVDWL 540
Query: 63 AHGQQAVELYSEQHRKTSLSHDKLL 87
G+Q VE Y HR SHD+++
Sbjct: 541 PLGRQCVEHYRLLHRYCVFSHDEMI 565
Score = 120 (47.3 bits), Expect = 1.9e-22, Sum P(2) = 1.9e-22
Identities = 27/96 (28%), Positives = 47/96 (48%)
Query: 136 KEGLQKLPSYFKLQKMEIDFDLKTERECFSCFYDLHLSAAGCKCSPDRFACLKHANIFCS 195
+E ++KL ++M+ + ER+C C +SA C C P CL H CS
Sbjct: 598 RETVRKL-GVIDSERMDFELLPDDERQCIKCKTTCFMSAISCSCKPGLLVCLHHVKELCS 656
Query: 196 CEIDHRFVI-LRYSTDELNTLVEALEGGLDALKELA 230
C +++ + RY+ D+L ++ AL+ ++ E A
Sbjct: 657 CP-PYKYKLRYRYTLDDLYPMMNALKLRAESYNEWA 691
>RGD|1305429 [details] [associations]
symbol:Kdm5a "lysine (K)-specific demethylase 5A" species:10116
"Rattus norvegicus" [GO:0003682 "chromatin binding" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0019907 "cyclin-dependent protein
kinase activating kinase holoenzyme complex" evidence=ISO]
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249
SMART:SM00501 SMART:SM00558 RGD:1305429 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 HOGENOM:HOG000290719 HOVERGEN:HBG068574
IPI:IPI00781814 EMBL:BC099835 UniGene:Rn.206273 UniGene:Rn.224608
ProteinModelPortal:Q499M6 UCSC:RGD:1305429 InParanoid:Q499M6
Genevestigator:Q499M6 Uniprot:Q499M6
Length = 1099
Score = 296 (109.3 bits), Expect = 2.1e-22, P = 2.1e-22
Identities = 103/369 (27%), Positives = 173/369 (46%)
Query: 3 LVEQVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWL 62
L + VT ++P+VL GVPVY Q +GEFV+TFPRAYHSGFN G+N AEAVN DWL
Sbjct: 533 LHQLVTIMNPNVLMEHGVPVYRTNQCAGEFVVTFPRAYHSGFNQGYNFAEAVNFCTADWL 592
Query: 63 AHGQQAVELYSEQHRKTSLSHDKLLFGSVQAAIKALWELSVLQKKTPGNRKWKDACGKDG 122
G+Q V Y R SH++L+F AA ++ + C +
Sbjct: 593 PIGRQCVNHYRRLRRHCVFSHEELIFK--MAADPECLDVGLAAM----------VCKELT 640
Query: 123 VLTKAIKTRVQMKKEGLQKLPSYFKLQKMEIDFDL--KTERECFSCFYDLHLSAAGCKCS 180
++T+ +TR+ +E + ++ + + E+ F+L ER+C +C LSA C C+
Sbjct: 641 LMTEE-ETRL---RESVVQMGVV--MSEEEV-FELVPDDERQCSACRTTCFLSALTCSCN 693
Query: 181 PDRFACLKHANIFCSCEIDHRFVILRYSTDELNTLVEALEGGLDALKELASKNFKWADCS 240
P+R CL H CSC + ++ + RY ++L +L+ ++ + ++ + S
Sbjct: 694 PERLVCLYHPTDLCSCPMQNKCLRYRYPLEDLPSLLYGVKVRAQSYDTWVNRVTEALSAS 753
Query: 241 DTDGGLVKMDM-ESEVFPMDCCEQKESSSSSPR-VENIVEGNGPCCSRSHVSSEVVQSEP 298
K D+ E V D ++K + R + + V+ C S + + Q
Sbjct: 754 FNH----KKDLIELRVMLEDAEDRKYPENDLFRKLRDAVKEAETCGSVAQLLLSKKQKHR 809
Query: 299 QRGTSGLSASHVSVNSHNEGNDETQ----VMNKKAKVK---------HEVCIDLNMDVIP 345
Q SG + + ++V + V+++ +VK HE + MD P
Sbjct: 810 QSSDSGKTRTKLTVEELKAFVQQLVSLPCVISQTRQVKNLLDDVEEFHERAQEAMMDETP 869
Query: 346 DGNESKLLL 354
D ++ ++L+
Sbjct: 870 DSSKLQVLI 878
>UNIPROTKB|E9PSW7 [details] [associations]
symbol:Jarid1a "Protein Jarid1a" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016706 "oxidoreductase activity, acting on
paired donors, with incorporation or reduction of molecular oxygen,
2-oxoglutarate as one donor, and incorporation of one atom each of
oxygen into both donors" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 IPI:IPI00781814
Ensembl:ENSRNOT00000056198 OMA:IRTRTRN ArrayExpress:E9PSW7
Uniprot:E9PSW7
Length = 1099
Score = 296 (109.3 bits), Expect = 2.1e-22, P = 2.1e-22
Identities = 103/369 (27%), Positives = 173/369 (46%)
Query: 3 LVEQVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWL 62
L + VT ++P+VL GVPVY Q +GEFV+TFPRAYHSGFN G+N AEAVN DWL
Sbjct: 533 LHQLVTIMNPNVLMEHGVPVYRTNQCAGEFVVTFPRAYHSGFNQGYNFAEAVNFCTADWL 592
Query: 63 AHGQQAVELYSEQHRKTSLSHDKLLFGSVQAAIKALWELSVLQKKTPGNRKWKDACGKDG 122
G+Q V Y R SH++L+F AA ++ + C +
Sbjct: 593 PIGRQCVNHYRRLRRHCVFSHEELIFK--MAADPECLDVGLAAM----------VCKELT 640
Query: 123 VLTKAIKTRVQMKKEGLQKLPSYFKLQKMEIDFDL--KTERECFSCFYDLHLSAAGCKCS 180
++T+ +TR+ +E + ++ + + E+ F+L ER+C +C LSA C C+
Sbjct: 641 LMTEE-ETRL---RESVVQMGVV--MSEEEV-FELVPDDERQCSACRTTCFLSALTCSCN 693
Query: 181 PDRFACLKHANIFCSCEIDHRFVILRYSTDELNTLVEALEGGLDALKELASKNFKWADCS 240
P+R CL H CSC + ++ + RY ++L +L+ ++ + ++ + S
Sbjct: 694 PERLVCLYHPTDLCSCPMQNKCLRYRYPLEDLPSLLYGVKVRAQSYDTWVNRVTEALSAS 753
Query: 241 DTDGGLVKMDM-ESEVFPMDCCEQKESSSSSPR-VENIVEGNGPCCSRSHVSSEVVQSEP 298
K D+ E V D ++K + R + + V+ C S + + Q
Sbjct: 754 FNH----KKDLIELRVMLEDAEDRKYPENDLFRKLRDAVKEAETCGSVAQLLLSKKQKHR 809
Query: 299 QRGTSGLSASHVSVNSHNEGNDETQ----VMNKKAKVK---------HEVCIDLNMDVIP 345
Q SG + + ++V + V+++ +VK HE + MD P
Sbjct: 810 QSSDSGKTRTKLTVEELKAFVQQLVSLPCVISQTRQVKNLLDDVEEFHERAQEAMMDETP 869
Query: 346 DGNESKLLL 354
D ++ ++L+
Sbjct: 870 DSSKLQVLI 878
>UNIPROTKB|B4E1Y0 [details] [associations]
symbol:KDM5D "Lysine-specific demethylase 5D" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
EMBL:AC010889 UniGene:Hs.80358 HGNC:HGNC:11115 ChiTaRS:KDM5D
HOVERGEN:HBG068574 EMBL:AK304027 IPI:IPI01013623 SMR:B4E1Y0
STRING:B4E1Y0 Ensembl:ENST00000535647 UCSC:uc004fuh.2
Uniprot:B4E1Y0
Length = 888
Score = 221 (82.9 bits), Expect = 2.3e-22, Sum P(2) = 2.3e-22
Identities = 43/85 (50%), Positives = 56/85 (65%)
Query: 3 LVEQVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWL 62
L + VT ++P+ L + GVPV Q +GEFV+TFPRAYHSGFN G+N AEAVN DWL
Sbjct: 554 LHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADWL 613
Query: 63 AHGQQAVELYSEQHRKTSLSHDKLL 87
G+Q +E Y R SH++L+
Sbjct: 614 PAGRQCIEHYRRLRRYCVFSHEELI 638
Score = 126 (49.4 bits), Expect = 2.3e-22, Sum P(2) = 2.3e-22
Identities = 25/73 (34%), Positives = 36/73 (49%)
Query: 160 ERECFSCFYDLHLSAAGCKCSPDRFACLKHANIFCSCEIDHRFVILRYSTDELNTLVEAL 219
ER+C C LSA C PD CL H N C C +++ RY+ DEL T++ L
Sbjct: 694 ERQCIKCKTTCFLSALACYDCPDGLVCLSHINDLCKCSSSRQYLRYRYTLDELPTMLHKL 753
Query: 220 EGGLDALKELASK 232
+ ++ A+K
Sbjct: 754 KIRAESFDTWANK 766
>UNIPROTKB|Q9UGL1 [details] [associations]
symbol:KDM5B "Lysine-specific demethylase 5B" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0003714 "transcription corepressor activity" evidence=IDA]
[GO:0034647 "histone demethylase activity (H3-trimethyl-K4
specific)" evidence=IDA] [GO:0034648 "histone demethylase activity
(H3-dimethyl-K4 specific)" evidence=IDA] [GO:0034720 "histone H3-K4
demethylation" evidence=IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=TAS] [GO:0005634
"nucleus" evidence=TAS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0034721 "histone
H3-K4 demethylation, trimethyl-H3-K4-specific" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0003714 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0003700
GO:GO:0006351 GO:GO:0016706 GO:GO:0016702 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 eggNOG:NOG327026 GO:GO:0034647 KO:K11446
HOGENOM:HOG000290719 HSSP:Q14839 CTD:10765 OrthoDB:EOG4HT8RC
EMBL:AJ132440 EMBL:AF087481 EMBL:AJ243706 EMBL:AC098934
EMBL:AC104463 IPI:IPI00847436 IPI:IPI00873956 RefSeq:NP_006609.3
UniGene:Hs.443650 ProteinModelPortal:Q9UGL1 SMR:Q9UGL1
DIP:DIP-53652N IntAct:Q9UGL1 STRING:Q9UGL1 PhosphoSite:Q9UGL1
DMDM:296439317 PaxDb:Q9UGL1 PRIDE:Q9UGL1 Ensembl:ENST00000367264
Ensembl:ENST00000367265 GeneID:10765 KEGG:hsa:10765 UCSC:uc001gyf.3
UCSC:uc009xag.3 GeneCards:GC01M202696 H-InvDB:HIX0001478
HGNC:HGNC:18039 HPA:HPA027179 MIM:605393 neXtProt:NX_Q9UGL1
PharmGKB:PA164721626 InParanoid:Q9UGL1 OMA:CENEKEM ChiTaRS:KDM5B
GenomeRNAi:10765 NextBio:40877 ArrayExpress:Q9UGL1 Bgee:Q9UGL1
CleanEx:HS_JARID1B Genevestigator:Q9UGL1 Uniprot:Q9UGL1
Length = 1544
Score = 233 (87.1 bits), Expect = 2.7e-22, Sum P(2) = 2.7e-22
Identities = 47/85 (55%), Positives = 57/85 (67%)
Query: 3 LVEQVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWL 62
L + VT ++P+ L VPVY Q +GEFV+TFPRAYHSGFN GFN AEAVN VDWL
Sbjct: 549 LHQLVTIMNPNTLMTHEVPVYRTNQCAGEFVITFPRAYHSGFNQGFNFAEAVNFCTVDWL 608
Query: 63 AHGQQAVELYSEQHRKTSLSHDKLL 87
G+Q VE Y HR SHD+++
Sbjct: 609 PLGRQCVEHYRLLHRYCVFSHDEMI 633
Score = 119 (46.9 bits), Expect = 2.7e-22, Sum P(2) = 2.7e-22
Identities = 27/96 (28%), Positives = 47/96 (48%)
Query: 136 KEGLQKLPSYFKLQKMEIDFDLKTERECFSCFYDLHLSAAGCKCSPDRFACLKHANIFCS 195
+E ++KL ++M+ + ER+C C +SA C C P CL H CS
Sbjct: 666 RETVRKL-GVIDSERMDFELLPDDERQCVKCKTTCFMSAISCSCKPGLLVCLHHVKELCS 724
Query: 196 CEIDHRFVI-LRYSTDELNTLVEALEGGLDALKELA 230
C +++ + RY+ D+L ++ AL+ ++ E A
Sbjct: 725 CP-PYKYKLRYRYTLDDLYPMMNALKLRAESYNEWA 759
>MGI|MGI:1922855 [details] [associations]
symbol:Kdm5b "lysine (K)-specific demethylase 5B"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=ISO] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016702
"oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0016706 "oxidoreductase activity, acting
on paired donors, with incorporation or reduction of molecular
oxygen, 2-oxoglutarate as one donor, and incorporation of one atom
each of oxygen into both donors" evidence=IEA] [GO:0032453 "histone
demethylase activity (H3-K4 specific)" evidence=IDA] [GO:0034647
"histone demethylase activity (H3-trimethyl-K4 specific)"
evidence=ISO] [GO:0034648 "histone demethylase activity
(H3-dimethyl-K4 specific)" evidence=ISO] [GO:0034720 "histone H3-K4
demethylation" evidence=ISO;IDA] [GO:0034721 "histone H3-K4
demethylation, trimethyl-H3-K4-specific" evidence=ISO] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 MGI:MGI:1922855 GO:GO:0003714 GO:GO:0045892
GO:GO:0005730 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006351 GO:GO:0016706 GO:GO:0016702 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 eggNOG:NOG327026 GeneTree:ENSGT00530000063118
GO:GO:0034647 KO:K11446 HOGENOM:HOG000290719 CTD:10765
OrthoDB:EOG4HT8RC OMA:CENEKEM EMBL:AY082429 EMBL:AY082430
EMBL:AK220451 EMBL:BC048180 EMBL:BC057318 EMBL:AK041304
IPI:IPI00330824 IPI:IPI00776332 RefSeq:NP_690855.2 UniGene:Mm.28995
UniGene:Mm.391994 PDB:2EQY PDBsum:2EQY ProteinModelPortal:Q80Y84
SMR:Q80Y84 IntAct:Q80Y84 STRING:Q80Y84 PhosphoSite:Q80Y84
PRIDE:Q80Y84 Ensembl:ENSMUST00000047714 Ensembl:ENSMUST00000112198
GeneID:75605 KEGG:mmu:75605 UCSC:uc007csg.2 UCSC:uc011wsg.1
InParanoid:Q80Y84 EvolutionaryTrace:Q80Y84 NextBio:343484
Bgee:Q80Y84 Genevestigator:Q80Y84 Uniprot:Q80Y84
Length = 1544
Score = 233 (87.1 bits), Expect = 2.7e-22, Sum P(2) = 2.7e-22
Identities = 47/85 (55%), Positives = 57/85 (67%)
Query: 3 LVEQVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWL 62
L + VT ++P+ L VPVY Q +GEFV+TFPRAYHSGFN GFN AEAVN VDWL
Sbjct: 549 LHQLVTIMNPNTLMTHEVPVYRTNQCAGEFVITFPRAYHSGFNQGFNFAEAVNFCTVDWL 608
Query: 63 AHGQQAVELYSEQHRKTSLSHDKLL 87
G+Q VE Y HR SHD+++
Sbjct: 609 PLGRQCVEHYRLLHRYCVFSHDEMI 633
Score = 119 (46.9 bits), Expect = 2.7e-22, Sum P(2) = 2.7e-22
Identities = 27/96 (28%), Positives = 47/96 (48%)
Query: 136 KEGLQKLPSYFKLQKMEIDFDLKTERECFSCFYDLHLSAAGCKCSPDRFACLKHANIFCS 195
+E ++KL ++M+ + ER+C C +SA C C P CL H CS
Sbjct: 666 RETVRKL-GVIDSERMDFELLPDDERQCIKCKTTCFMSAISCSCKPGLLVCLHHVKELCS 724
Query: 196 CEIDHRFVI-LRYSTDELNTLVEALEGGLDALKELA 230
C +++ + RY+ D+L ++ AL+ ++ E A
Sbjct: 725 CP-PYKYNLRYRYTLDDLYPMMNALKLRAESYNEWA 759
>RGD|1565602 [details] [associations]
symbol:Kdm5b "lysine (K)-specific demethylase 5B" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016706 "oxidoreductase activity, acting
on paired donors, with incorporation or reduction of molecular
oxygen, 2-oxoglutarate as one donor, and incorporation of one atom
each of oxygen into both donors" evidence=IEA] [GO:0032453 "histone
demethylase activity (H3-K4 specific)" evidence=ISO] [GO:0034647
"histone demethylase activity (H3-trimethyl-K4 specific)"
evidence=IEA;ISO] [GO:0034648 "histone demethylase activity
(H3-dimethyl-K4 specific)" evidence=IEA;ISO] [GO:0034720 "histone
H3-K4 demethylation" evidence=ISO] [GO:0034721 "histone H3-K4
demethylation, trimethyl-H3-K4-specific" evidence=ISO] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA;ISO] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
RGD:1565602 GO:GO:0003714 GO:GO:0045892 GO:GO:0005730 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 GeneTree:ENSGT00530000063118 GO:GO:0034647
OrthoDB:EOG4HT8RC IPI:IPI00554242 Ensembl:ENSRNOT00000006290
UCSC:RGD:1565602 Uniprot:D3ZUT4
Length = 1546
Score = 233 (87.1 bits), Expect = 2.7e-22, Sum P(2) = 2.7e-22
Identities = 47/85 (55%), Positives = 57/85 (67%)
Query: 3 LVEQVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWL 62
L + VT ++P+ L VPVY Q +GEFV+TFPRAYHSGFN GFN AEAVN VDWL
Sbjct: 551 LHQLVTIMNPNTLMTHEVPVYRTNQCAGEFVITFPRAYHSGFNQGFNFAEAVNFCTVDWL 610
Query: 63 AHGQQAVELYSEQHRKTSLSHDKLL 87
G+Q VE Y HR SHD+++
Sbjct: 611 PLGRQCVEHYRLLHRYCVFSHDEMI 635
Score = 119 (46.9 bits), Expect = 2.7e-22, Sum P(2) = 2.7e-22
Identities = 27/96 (28%), Positives = 47/96 (48%)
Query: 136 KEGLQKLPSYFKLQKMEIDFDLKTERECFSCFYDLHLSAAGCKCSPDRFACLKHANIFCS 195
+E ++KL ++M+ + ER+C C +SA C C P CL H CS
Sbjct: 668 RETVRKL-GVIDSERMDFELLPDDERQCIKCKTTCFMSAISCSCKPGLLVCLHHVKELCS 726
Query: 196 CEIDHRFVI-LRYSTDELNTLVEALEGGLDALKELA 230
C +++ + RY+ D+L ++ AL+ ++ E A
Sbjct: 727 CP-PYKYNLRYRYTLDDLYPMMNALKLRAESYNEWA 761
>MGI|MGI:2136980 [details] [associations]
symbol:Kdm5a "lysine (K)-specific demethylase 5A"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0016702 "oxidoreductase
activity, acting on single donors with incorporation of molecular
oxygen, incorporation of two atoms of oxygen" evidence=IEA]
[GO:0016706 "oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
MGI:MGI:2136980 GO:GO:0007275 GO:GO:0005737 GO:GO:0045893
GO:GO:0005730 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006351 GO:GO:0003682 GO:GO:0016568 GO:GO:0016706
GO:GO:0016702 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0019907
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
eggNOG:NOG327026 GeneTree:ENSGT00530000063118 KO:K11446 CTD:5927
HOGENOM:HOG000290719 OMA:ECSKPRE ChiTaRS:KDM5A EMBL:AC155720
EMBL:AC078896 EMBL:AK135085 EMBL:AK144877 EMBL:AK166055
EMBL:BC080691 IPI:IPI00849089 RefSeq:NP_666109.2 UniGene:Mm.404761
UniGene:Mm.463658 ProteinModelPortal:Q3UXZ9 SMR:Q3UXZ9
IntAct:Q3UXZ9 STRING:Q3UXZ9 PhosphoSite:Q3UXZ9 PaxDb:Q3UXZ9
PRIDE:Q3UXZ9 Ensembl:ENSMUST00000100996 GeneID:214899
KEGG:mmu:214899 UCSC:uc009dne.2 InParanoid:Q3UXZ9 NextBio:374501
Bgee:Q3UXZ9 CleanEx:MM_RBP2 Genevestigator:Q3UXZ9 Uniprot:Q3UXZ9
Length = 1690
Score = 297 (109.6 bits), Expect = 3.0e-22, P = 3.0e-22
Identities = 103/369 (27%), Positives = 173/369 (46%)
Query: 3 LVEQVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWL 62
L + VT ++P+VL GVPVY Q +GEFV+TFPRAYHSGFN G+N AEAVN DWL
Sbjct: 533 LHQLVTIMNPNVLMEHGVPVYRTNQCAGEFVVTFPRAYHSGFNQGYNFAEAVNFCTADWL 592
Query: 63 AHGQQAVELYSEQHRKTSLSHDKLLFGSVQAAIKALWELSVLQKKTPGNRKWKDACGKDG 122
G+Q V Y R SH++L+F AA ++ + C +
Sbjct: 593 PIGRQCVNHYRRLRRHCVFSHEELIFK--MAADPECLDVGLAAM----------VCKELT 640
Query: 123 VLTKAIKTRVQMKKEGLQKLPSYFKLQKMEIDFDL--KTERECFSCFYDLHLSAAGCKCS 180
++T+ +TR+ +E + ++ + + E+ F+L ER+C +C LSA C C+
Sbjct: 641 LMTEE-ETRL---RESVVQMGVV--MSEEEV-FELVPDDERQCSACRTTCFLSALTCSCN 693
Query: 181 PDRFACLKHANIFCSCEIDHRFVILRYSTDELNTLVEALEGGLDALKELASKNFKWADCS 240
P+R CL H CSC + ++ + RY ++L +L+ ++ + ++ + S
Sbjct: 694 PERLVCLYHPTDLCSCPMQNKCLRYRYPLEDLPSLLYGVKVRAQSYDTWVNRVTEALSAS 753
Query: 241 DTDGGLVKMDM-ESEVFPMDCCEQKESSSSSPR-VENIVEGNGPCCSRSHVSSEVVQSEP 298
K D+ E V D ++K + R + + V+ C S + + Q
Sbjct: 754 FNH----KKDLIELRVMLEDAEDRKYPENDLFRKLRDAVKEAETCGSVAQLLLSKKQKHR 809
Query: 299 QRGTSGLSASHVSVNSHNEGNDETQ----VMNKKAKVK---------HEVCIDLNMDVIP 345
Q SG + + ++V + V+++ +VK HE + MD P
Sbjct: 810 QSSDSGKTRTKLTVEELKAFVQQLVSLPCVISQTRQVKNLLDDVEEFHERAQEAMMDETP 869
Query: 346 DGNESKLLL 354
D ++ ++L+
Sbjct: 870 DSSKLQMLI 878
>UNIPROTKB|E7EV89 [details] [associations]
symbol:KDM5A "Lysine-specific demethylase 5A" species:9606
"Homo sapiens" [GO:0016706 "oxidoreductase activity, acting on
paired donors, with incorporation or reduction of molecular oxygen,
2-oxoglutarate as one donor, and incorporation of one atom each of
oxygen into both donors" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS51184
SMART:SM00558 GO:GO:0005634 GO:GO:0005737 GO:GO:0016706
EMBL:AC005844 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 EMBL:AC007406 HGNC:HGNC:9886 ChiTaRS:KDM5A
IPI:IPI00909864 ProteinModelPortal:E7EV89 SMR:E7EV89 PRIDE:E7EV89
Ensembl:ENST00000544760 ArrayExpress:E7EV89 Bgee:E7EV89
Uniprot:E7EV89
Length = 715
Score = 291 (107.5 bits), Expect = 3.3e-22, P = 3.3e-22
Identities = 102/367 (27%), Positives = 166/367 (45%)
Query: 3 LVEQVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWL 62
L + VT ++P+VL GVPVY Q +GEFV+TFPRAYHSGFN G+N AEAVN DWL
Sbjct: 152 LHQLVTIMNPNVLMEHGVPVYRTNQCAGEFVVTFPRAYHSGFNQGYNFAEAVNFCTADWL 211
Query: 63 AHGQQAVELYSEQHRKTSLSHDKLLFGSVQAAIKALWELSVLQKKTPGNRKWKDACGKDG 122
G+Q V Y R SH++L+F AA ++ + C +
Sbjct: 212 PIGRQCVNHYRRLRRHCVFSHEELIFK--MAADPECLDVGLAAM----------VCKELT 259
Query: 123 VLTKAIKTRVQMKKEGLQKLPSYFKLQKMEIDFDLKTERECFSCFYDLHLSAAGCKCSPD 182
++T+ +TR++ + L S ++ ++ D ER+C +C LSA C C+P+
Sbjct: 260 LMTEE-ETRLRESVVQMGVLMSEEEVFELVPD----DERQCSACRTTCFLSALTCSCNPE 314
Query: 183 RFACLKHANIFCSCEIDHRFVILRYSTDELNTLVEALEGGLDALKELASKNFKWADCSDT 242
R CL H C C + + + RY ++L +L+ ++ + S+ + +
Sbjct: 315 RLVCLYHPTDLCPCPMQKKCLRYRYPLEDLPSLLYGVKVRAQSYDTWVSRVTEALSANFN 374
Query: 243 DGGLVKMDM-ESEVFPMDCCEQKESSSSSPR-VENIVEGNGPCCSRSHVSSEVVQSEPQR 300
K D+ E V D ++K + R + + V+ C S + + Q Q
Sbjct: 375 H----KKDLIELRVMLEDAEDRKYPENDLFRKLRDAVKEAETCASVAQLLLSKKQKHRQS 430
Query: 301 GTSGLSASHVSVNSHNEG-----------NDETQVMNKKAKVK--HEVCIDLNMDVIPDG 347
SG + + ++V + QV N V+ HE + MD PD
Sbjct: 431 PDSGRTRTKLTVEELKAFVQQLFSLPCVISQARQVKNLLDDVEEFHERAQEAMMDETPDS 490
Query: 348 NESKLLL 354
++ ++L+
Sbjct: 491 SKLQMLI 497
>UNIPROTKB|F1Q4J4 [details] [associations]
symbol:KDM5A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 KO:K11446 CTD:5927 OMA:ECSKPRE
EMBL:AAEX03015319 EMBL:AAEX03015320 RefSeq:XP_854690.3
Ensembl:ENSCAFT00000025008 GeneID:477727 KEGG:cfa:477727
Uniprot:F1Q4J4
Length = 1688
Score = 296 (109.3 bits), Expect = 3.8e-22, P = 3.8e-22
Identities = 102/367 (27%), Positives = 167/367 (45%)
Query: 3 LVEQVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWL 62
L + VT ++P++L GVPVY Q +GEFV+TFPRAYHSGFN G+N AEAVN DWL
Sbjct: 533 LHQLVTIMNPNILMEHGVPVYRTNQCAGEFVVTFPRAYHSGFNQGYNFAEAVNFCTADWL 592
Query: 63 AHGQQAVELYSEQHRKTSLSHDKLLFGSVQAAIKALWELSVLQKKTPGNRKWKDACGKDG 122
G+Q V Y R SH++L+F AA ++ + C +
Sbjct: 593 PIGRQCVNHYRRLRRHCVFSHEELIFK--MAADPECLDVGLAAM----------VCKELT 640
Query: 123 VLTKAIKTRVQMKKEGLQKLPSYFKLQKMEIDFDLKTERECFSCFYDLHLSAAGCKCSPD 182
++T+ +TR++ + L S ++ ++ D ER+C +C LSA C C+P+
Sbjct: 641 LMTEE-ETRLRESVVQMGVLMSEEEVFELVPD----DERQCSACRTTCFLSALTCSCNPE 695
Query: 183 RFACLKHANIFCSCEIDHRFVILRYSTDELNTLVEALEGGLDALKELASKNFKWADCSDT 242
R CL H N C C + + + RY ++L +L+ ++ + S+ + +
Sbjct: 696 RLVCLYHPNDLCPCPMQKKCLRYRYPLEDLPSLLYGVKVRAQSYDTWVSRVTEALSANFN 755
Query: 243 DGGLVKMDM-ESEVFPMDCCEQKESSSSSPR-VENIVEGNGPCCSRSHVSSEVVQSEPQR 300
K D+ E V D ++K + R + + V+ C S + + Q Q
Sbjct: 756 H----KKDLIELRVMLEDAEDRKYPENDLFRKLRDAVKEAETCASVAQLLLSKKQKHRQS 811
Query: 301 GTSGLSASHVSVNSHNEG-----------NDETQVMNKKAKVK--HEVCIDLNMDVIPDG 347
SG + + ++V + QV N V+ HE + MD PD
Sbjct: 812 PDSGRTRTKLTVEELKAFVQQLFSLPCVISQARQVKNLLDDVEEFHERAQEAMMDETPDS 871
Query: 348 NESKLLL 354
++ ++L+
Sbjct: 872 SKLQMLI 878
>UNIPROTKB|E9PSM3 [details] [associations]
symbol:Jarid1a "Protein Jarid1a" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016706 "oxidoreductase activity, acting on
paired donors, with incorporation or reduction of molecular oxygen,
2-oxoglutarate as one donor, and incorporation of one atom each of
oxygen into both donors" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005737 GO:GO:0045893 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003682 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0019907 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 IPI:IPI00365351
Ensembl:ENSRNOT00000034548 NextBio:665124 ArrayExpress:E9PSM3
Uniprot:E9PSM3
Length = 1690
Score = 296 (109.3 bits), Expect = 3.8e-22, P = 3.8e-22
Identities = 103/369 (27%), Positives = 173/369 (46%)
Query: 3 LVEQVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWL 62
L + VT ++P+VL GVPVY Q +GEFV+TFPRAYHSGFN G+N AEAVN DWL
Sbjct: 533 LHQLVTIMNPNVLMEHGVPVYRTNQCAGEFVVTFPRAYHSGFNQGYNFAEAVNFCTADWL 592
Query: 63 AHGQQAVELYSEQHRKTSLSHDKLLFGSVQAAIKALWELSVLQKKTPGNRKWKDACGKDG 122
G+Q V Y R SH++L+F AA ++ + C +
Sbjct: 593 PIGRQCVNHYRRLRRHCVFSHEELIFK--MAADPECLDVGLAAM----------VCKELT 640
Query: 123 VLTKAIKTRVQMKKEGLQKLPSYFKLQKMEIDFDL--KTERECFSCFYDLHLSAAGCKCS 180
++T+ +TR+ +E + ++ + + E+ F+L ER+C +C LSA C C+
Sbjct: 641 LMTEE-ETRL---RESVVQMGVV--MSEEEV-FELVPDDERQCSACRTTCFLSALTCSCN 693
Query: 181 PDRFACLKHANIFCSCEIDHRFVILRYSTDELNTLVEALEGGLDALKELASKNFKWADCS 240
P+R CL H CSC + ++ + RY ++L +L+ ++ + ++ + S
Sbjct: 694 PERLVCLYHPTDLCSCPMQNKCLRYRYPLEDLPSLLYGVKVRAQSYDTWVNRVTEALSAS 753
Query: 241 DTDGGLVKMDM-ESEVFPMDCCEQKESSSSSPR-VENIVEGNGPCCSRSHVSSEVVQSEP 298
K D+ E V D ++K + R + + V+ C S + + Q
Sbjct: 754 FNH----KKDLIELRVMLEDAEDRKYPENDLFRKLRDAVKEAETCGSVAQLLLSKKQKHR 809
Query: 299 QRGTSGLSASHVSVNSHNEGNDETQ----VMNKKAKVK---------HEVCIDLNMDVIP 345
Q SG + + ++V + V+++ +VK HE + MD P
Sbjct: 810 QSSDSGKTRTKLTVEELKAFVQQLVSLPCVISQTRQVKNLLDDVEEFHERAQEAMMDETP 869
Query: 346 DGNESKLLL 354
D ++ ++L+
Sbjct: 870 DSSKLQVLI 878
>FB|FBgn0031759 [details] [associations]
symbol:lid "little imaginal discs" species:7227 "Drosophila
melanogaster" [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016706 "oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0032453 "histone
demethylase activity (H3-K4 specific)" evidence=IMP] [GO:0043992
"histone acetyltransferase activity (H3-K9 specific)" evidence=IMP]
[GO:0034647 "histone demethylase activity (H3-trimethyl-K4
specific)" evidence=IMP] [GO:0034720 "histone H3-K4 demethylation"
evidence=IMP] [GO:0043970 "histone H3-K9 acetylation" evidence=IMP]
[GO:0070822 "Sin3-type complex" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006325 "chromatin organization" evidence=IMP]
[GO:0045475 "locomotor rhythm" evidence=IMP] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0007275 GO:GO:0045893 EMBL:AE014134
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0006351
GO:GO:0016706 GO:GO:0016702 GO:GO:0045475 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.10.150.60
SUPFAM:SSF46774 GO:GO:0070822 InterPro:IPR003349 PROSITE:PS51183
Pfam:PF02375 SMART:SM00545 eggNOG:NOG327026
GeneTree:ENSGT00530000063118 GO:GO:0034647 KO:K11446 OMA:TEMVERE
EMBL:AY095051 RefSeq:NP_001245908.1 RefSeq:NP_001245909.1
RefSeq:NP_001245910.1 RefSeq:NP_523486.1 RefSeq:NP_723140.1
UniGene:Dm.2779 PDB:2LM1 PDBsum:2LM1 ProteinModelPortal:Q9VMJ7
SMR:Q9VMJ7 DIP:DIP-29330N IntAct:Q9VMJ7 MINT:MINT-1672742
STRING:Q9VMJ7 PaxDb:Q9VMJ7 PRIDE:Q9VMJ7 EnsemblMetazoa:FBtr0079231
EnsemblMetazoa:FBtr0079232 EnsemblMetazoa:FBtr0307069
EnsemblMetazoa:FBtr0307070 EnsemblMetazoa:FBtr0307071 GeneID:33837
KEGG:dme:Dmel_CG9088 CTD:33837 FlyBase:FBgn0031759
InParanoid:Q9VMJ7 OrthoDB:EOG408KPT PhylomeDB:Q9VMJ7
GenomeRNAi:33837 NextBio:785524 Bgee:Q9VMJ7 GO:GO:0043992
Uniprot:Q9VMJ7
Length = 1838
Score = 234 (87.4 bits), Expect = 3.9e-22, Sum P(3) = 3.9e-22
Identities = 45/85 (52%), Positives = 59/85 (69%)
Query: 3 LVEQVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWL 62
L + VT ++P++L VPV+ QH+GEFV+TFPRAYH+GFN G+N AEAVN AP DWL
Sbjct: 687 LHQLVTIMNPNILMNNRVPVFRTDQHAGEFVITFPRAYHAGFNQGYNFAEAVNFAPADWL 746
Query: 63 AHGQQAVELYSEQHRKTSLSHDKLL 87
G++ V YS R SHD+L+
Sbjct: 747 KMGRECVNHYSMLRRFCVFSHDELV 771
Score = 120 (47.3 bits), Expect = 3.9e-22, Sum P(3) = 3.9e-22
Identities = 28/104 (26%), Positives = 51/104 (49%)
Query: 117 ACGKDGVLTKAIKTRVQMKKEGLQKLPSYFKLQKMEIDFDLKTERECFSCFYDLHLSAAG 176
AC D + + + T +++K L+ + + + E+ D ER C C LSA
Sbjct: 788 ACYID--MAEMVDTEKKLRKSLLEWGVTRAERRAFELVND--DERHCQECNTTCFLSAVA 843
Query: 177 CKCSPDRFACLKHANIFCSCEIDHRFVILRYSTDELNTLVEALE 220
C+C+ CL+H + C C + +I RY+ DE+ +++ L+
Sbjct: 844 CECNDKLIVCLRHYTVLCGCAPEKHTLIYRYTLDEMPLMLQKLK 887
Score = 47 (21.6 bits), Expect = 3.9e-22, Sum P(3) = 3.9e-22
Identities = 18/71 (25%), Positives = 30/71 (42%)
Query: 518 ISEVLDAGLLGPLFKVTLEECPS--ETFVNVSAQKCWEMVLQRLNQEIERQGGLHERGLP 575
I +LD + G L +V+L+E + ++R+ Q ++RQ H LP
Sbjct: 1502 IENLLDLMMEGDLLEVSLDETQELWRILETMPPTLLQAEAMERVVQYMQRQRQQHTNPLP 1561
Query: 576 HPQSLQSIDGL 586
+ S D L
Sbjct: 1562 TSGAEDSNDSL 1572
>UNIPROTKB|F1MQ59 [details] [associations]
symbol:KDM5A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0019907 "cyclin-dependent protein kinase activating kinase
holoenzyme complex" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0016706 "oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249
SMART:SM00501 SMART:SM00558 GO:GO:0005737 GO:GO:0045893
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0003682
GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0019907
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 OMA:ECSKPRE EMBL:DAAA02014587
IPI:IPI00715082 Ensembl:ENSBTAT00000027280 Uniprot:F1MQ59
Length = 1693
Score = 295 (108.9 bits), Expect = 5.0e-22, P = 5.0e-22
Identities = 103/370 (27%), Positives = 172/370 (46%)
Query: 3 LVEQVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWL 62
L + VT ++P+VL GVPVY Q +GEFV+TFPRAYHSGFN G+N AEAVN DWL
Sbjct: 533 LHQLVTIMNPNVLMEHGVPVYRTNQCAGEFVVTFPRAYHSGFNQGYNFAEAVNFCTADWL 592
Query: 63 AHGQQAVELYSEQHRKTSLSHDKLLFGSVQAAIKALWELSVLQKKTPGNRKWKDACGKDG 122
G+Q V Y R SH++L+F AA ++ + C +
Sbjct: 593 PIGRQCVSHYRRLRRHCVFSHEELIFK--MAADPECLDVGLAAM----------VCKELT 640
Query: 123 VLTKAIKTRVQMKKEGLQKLPSYFKLQKMEIDFDL--KTERECFSCFYDLHLSAAGCKCS 180
+LT+ +TR+ +E + ++ + + E+ F+L ER+C +C LSA C C+
Sbjct: 641 LLTEE-ETRL---RESVMQMGVL--MSEEEV-FELVPDDERQCSACRTTCFLSALTCSCN 693
Query: 181 PDRFACLKHANIFCSCEIDHRFVILRYSTDELNTLVEALEGGLDALKELASKNFKW--AD 238
P+R CL H C C + + + RY ++L +L+ ++ + S+ + A+
Sbjct: 694 PERLVCLYHPTDLCPCPMQKKCLRYRYPLEDLPSLLYGVKVRAQSYDTWVSRVTEALSAN 753
Query: 239 CSDTDGGLVKMDMESEVFPMDCCEQKESSSSSPR-VENIVEGNGPCCSRSHVSSEVVQSE 297
+ G L+++ + E D ++K + R + + V+ C S + + Q
Sbjct: 754 FNHKKGDLIELRVMLE----DAEDRKYPENDLFRKLRDAVKEAETCASVAQLLLSKKQKH 809
Query: 298 PQRGTSGLSASHVSVNSHNEG-----------NDETQVMNKKAKVK--HEVCIDLNMDVI 344
Q G + + ++V + QV N V+ HE + MD
Sbjct: 810 RQSPDGGRTRTKLTVEELKAFVQQLFSLPCVISQARQVKNLLDDVEEFHERAQEAMMDET 869
Query: 345 PDGNESKLLL 354
PD ++ ++L+
Sbjct: 870 PDSSKLQMLI 879
>UNIPROTKB|E9PFH2 [details] [associations]
symbol:KDM5D "Lysine-specific demethylase 5D" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00558
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
EMBL:AC010889 HGNC:HGNC:11115 ChiTaRS:KDM5D IPI:IPI00644955
ProteinModelPortal:E9PFH2 SMR:E9PFH2 PRIDE:E9PFH2
Ensembl:ENST00000440077 ArrayExpress:E9PFH2 Bgee:E9PFH2
Uniprot:E9PFH2
Length = 1476
Score = 221 (82.9 bits), Expect = 8.9e-22, Sum P(2) = 8.9e-22
Identities = 43/85 (50%), Positives = 56/85 (65%)
Query: 3 LVEQVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWL 62
L + VT ++P+ L + GVPV Q +GEFV+TFPRAYHSGFN G+N AEAVN DWL
Sbjct: 513 LHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADWL 572
Query: 63 AHGQQAVELYSEQHRKTSLSHDKLL 87
G+Q +E Y R SH++L+
Sbjct: 573 PAGRQCIEHYRRLRRYCVFSHEELI 597
Score = 126 (49.4 bits), Expect = 8.9e-22, Sum P(2) = 8.9e-22
Identities = 25/73 (34%), Positives = 36/73 (49%)
Query: 160 ERECFSCFYDLHLSAAGCKCSPDRFACLKHANIFCSCEIDHRFVILRYSTDELNTLVEAL 219
ER+C C LSA C PD CL H N C C +++ RY+ DEL T++ L
Sbjct: 653 ERQCIKCKTTCFLSALACYDCPDGLVCLSHINDLCKCSSSRQYLRYRYTLDELPTMLHKL 712
Query: 220 EGGLDALKELASK 232
+ ++ A+K
Sbjct: 713 KIRAESFDTWANK 725
>UNIPROTKB|Q9BY66 [details] [associations]
symbol:KDM5D "Lysine-specific demethylase 5D" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=NAS] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0032453 "histone demethylase activity (H3-K4
specific)" evidence=IDA] [GO:0034720 "histone H3-K4 demethylation"
evidence=IDA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0007283 GO:GO:0016706 GO:GO:0016702 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 DrugBank:DB00126
Gene3D:1.10.150.60 SUPFAM:SSF46774 EMBL:CH471202 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 eggNOG:NOG327026
GO:GO:0032453 KO:K11446 HOGENOM:HOG000290719 OrthoDB:EOG4894KP
CTD:8284 EMBL:U52191 EMBL:D87072 EMBL:AF273841 EMBL:AC010889
EMBL:BC132721 EMBL:BC144102 EMBL:BC146767 EMBL:U52365 EMBL:AF134849
IPI:IPI00219940 IPI:IPI00329577 IPI:IPI00922879
RefSeq:NP_001140177.1 RefSeq:NP_001140178.1 RefSeq:NP_004644.2
UniGene:Hs.80358 PDB:2E6R PDB:2YQE PDBsum:2E6R PDBsum:2YQE
ProteinModelPortal:Q9BY66 SMR:Q9BY66 IntAct:Q9BY66 STRING:Q9BY66
PhosphoSite:Q9BY66 DMDM:17368706 PaxDb:Q9BY66 PRIDE:Q9BY66
Ensembl:ENST00000317961 Ensembl:ENST00000382806
Ensembl:ENST00000541639 GeneID:8284 KEGG:hsa:8284 UCSC:uc004fug.3
UCSC:uc010nwy.3 GeneCards:GC0YM021865 HGNC:HGNC:11115 MIM:426000
neXtProt:NX_Q9BY66 PharmGKB:PA35965 InParanoid:Q9BY66 OMA:TEMVERE
PhylomeDB:Q9BY66 ChiTaRS:KDM5D EvolutionaryTrace:Q9BY66
GenomeRNAi:8284 NextBio:31049 ArrayExpress:Q9BY66 Bgee:Q9BY66
CleanEx:HS_JARID1D Genevestigator:Q9BY66 GermOnline:ENSG00000012817
Uniprot:Q9BY66
Length = 1539
Score = 221 (82.9 bits), Expect = 9.9e-22, Sum P(2) = 9.9e-22
Identities = 43/85 (50%), Positives = 56/85 (65%)
Query: 3 LVEQVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWL 62
L + VT ++P+ L + GVPV Q +GEFV+TFPRAYHSGFN G+N AEAVN DWL
Sbjct: 554 LHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADWL 613
Query: 63 AHGQQAVELYSEQHRKTSLSHDKLL 87
G+Q +E Y R SH++L+
Sbjct: 614 PAGRQCIEHYRRLRRYCVFSHEELI 638
Score = 126 (49.4 bits), Expect = 9.9e-22, Sum P(2) = 9.9e-22
Identities = 25/73 (34%), Positives = 36/73 (49%)
Query: 160 ERECFSCFYDLHLSAAGCKCSPDRFACLKHANIFCSCEIDHRFVILRYSTDELNTLVEAL 219
ER+C C LSA C PD CL H N C C +++ RY+ DEL T++ L
Sbjct: 694 ERQCIKCKTTCFLSALACYDCPDGLVCLSHINDLCKCSSSRQYLRYRYTLDELPTMLHKL 753
Query: 220 EGGLDALKELASK 232
+ ++ A+K
Sbjct: 754 KIRAESFDTWANK 766
>UNIPROTKB|F5H1F7 [details] [associations]
symbol:KDM5A "Lysine-specific demethylase 5A" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
GO:GO:0005634 GO:GO:0005737 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774 EMBL:AC005844
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
EMBL:AC007406 HGNC:HGNC:9886 ChiTaRS:KDM5A IPI:IPI01018722
ProteinModelPortal:F5H1F7 SMR:F5H1F7 Ensembl:ENST00000382815
ArrayExpress:F5H1F7 Bgee:F5H1F7 Uniprot:F5H1F7
Length = 1636
Score = 291 (107.5 bits), Expect = 1.3e-21, P = 1.3e-21
Identities = 102/367 (27%), Positives = 166/367 (45%)
Query: 3 LVEQVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWL 62
L + VT ++P+VL GVPVY Q +GEFV+TFPRAYHSGFN G+N AEAVN DWL
Sbjct: 533 LHQLVTIMNPNVLMEHGVPVYRTNQCAGEFVVTFPRAYHSGFNQGYNFAEAVNFCTADWL 592
Query: 63 AHGQQAVELYSEQHRKTSLSHDKLLFGSVQAAIKALWELSVLQKKTPGNRKWKDACGKDG 122
G+Q V Y R SH++L+F AA ++ + C +
Sbjct: 593 PIGRQCVNHYRRLRRHCVFSHEELIFK--MAADPECLDVGLAAM----------VCKELT 640
Query: 123 VLTKAIKTRVQMKKEGLQKLPSYFKLQKMEIDFDLKTERECFSCFYDLHLSAAGCKCSPD 182
++T+ +TR++ + L S ++ ++ D ER+C +C LSA C C+P+
Sbjct: 641 LMTEE-ETRLRESVVQMGVLMSEEEVFELVPD----DERQCSACRTTCFLSALTCSCNPE 695
Query: 183 RFACLKHANIFCSCEIDHRFVILRYSTDELNTLVEALEGGLDALKELASKNFKWADCSDT 242
R CL H C C + + + RY ++L +L+ ++ + S+ + +
Sbjct: 696 RLVCLYHPTDLCPCPMQKKCLRYRYPLEDLPSLLYGVKVRAQSYDTWVSRVTEALSANFN 755
Query: 243 DGGLVKMDM-ESEVFPMDCCEQKESSSSSPR-VENIVEGNGPCCSRSHVSSEVVQSEPQR 300
K D+ E V D ++K + R + + V+ C S + + Q Q
Sbjct: 756 H----KKDLIELRVMLEDAEDRKYPENDLFRKLRDAVKEAETCASVAQLLLSKKQKHRQS 811
Query: 301 GTSGLSASHVSVNSHNEG-----------NDETQVMNKKAKVK--HEVCIDLNMDVIPDG 347
SG + + ++V + QV N V+ HE + MD PD
Sbjct: 812 PDSGRTRTKLTVEELKAFVQQLFSLPCVISQARQVKNLLDDVEEFHERAQEAMMDETPDS 871
Query: 348 NESKLLL 354
++ ++L+
Sbjct: 872 SKLQMLI 878
>UNIPROTKB|P29375 [details] [associations]
symbol:KDM5A "Lysine-specific demethylase 5A" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016702
"oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0019907 "cyclin-dependent
protein kinase activating kinase holoenzyme complex" evidence=IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=TAS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
GO:GO:0007275 GO:GO:0005634 GO:GO:0005737 GO:GO:0045893
GO:GO:0005730 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0003700 GO:GO:0003682 GO:GO:0016568 GO:GO:0006366
GO:GO:0016706 GO:GO:0016702 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774 EMBL:AC005844
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
EMBL:AC007406 eggNOG:NOG327026 KO:K11446 EMBL:S66431 EMBL:AB209999
EMBL:BC048307 EMBL:BC053893 EMBL:BC110916 IPI:IPI00021363
IPI:IPI01014284 PIR:I78879 RefSeq:NP_001036068.1 UniGene:Hs.76272
PDB:2JXJ PDB:2KGG PDB:2KGI PDB:3GL6 PDBsum:2JXJ PDBsum:2KGG
PDBsum:2KGI PDBsum:3GL6 ProteinModelPortal:P29375 SMR:P29375
DIP:DIP-472N IntAct:P29375 STRING:P29375 PhosphoSite:P29375
DMDM:215274124 PaxDb:P29375 PRIDE:P29375 Ensembl:ENST00000399788
GeneID:5927 KEGG:hsa:5927 UCSC:uc001qif.1 CTD:5927
GeneCards:GC12M000389 H-InvDB:HIX0010308 HGNC:HGNC:9886
HPA:HPA006201 MIM:180202 neXtProt:NX_P29375 PharmGKB:PA34250
HOGENOM:HOG000290719 OMA:ECSKPRE OrthoDB:EOG4GB758 ChiTaRS:KDM5A
EvolutionaryTrace:P29375 GenomeRNAi:5927 NextBio:23088
ArrayExpress:P29375 Bgee:P29375 CleanEx:HS_JARID1A CleanEx:HS_RBP2
Genevestigator:P29375 GermOnline:ENSG00000073614 Uniprot:P29375
Length = 1690
Score = 291 (107.5 bits), Expect = 1.3e-21, P = 1.3e-21
Identities = 102/367 (27%), Positives = 166/367 (45%)
Query: 3 LVEQVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWL 62
L + VT ++P+VL GVPVY Q +GEFV+TFPRAYHSGFN G+N AEAVN DWL
Sbjct: 533 LHQLVTIMNPNVLMEHGVPVYRTNQCAGEFVVTFPRAYHSGFNQGYNFAEAVNFCTADWL 592
Query: 63 AHGQQAVELYSEQHRKTSLSHDKLLFGSVQAAIKALWELSVLQKKTPGNRKWKDACGKDG 122
G+Q V Y R SH++L+F AA ++ + C +
Sbjct: 593 PIGRQCVNHYRRLRRHCVFSHEELIFK--MAADPECLDVGLAAM----------VCKELT 640
Query: 123 VLTKAIKTRVQMKKEGLQKLPSYFKLQKMEIDFDLKTERECFSCFYDLHLSAAGCKCSPD 182
++T+ +TR++ + L S ++ ++ D ER+C +C LSA C C+P+
Sbjct: 641 LMTEE-ETRLRESVVQMGVLMSEEEVFELVPD----DERQCSACRTTCFLSALTCSCNPE 695
Query: 183 RFACLKHANIFCSCEIDHRFVILRYSTDELNTLVEALEGGLDALKELASKNFKWADCSDT 242
R CL H C C + + + RY ++L +L+ ++ + S+ + +
Sbjct: 696 RLVCLYHPTDLCPCPMQKKCLRYRYPLEDLPSLLYGVKVRAQSYDTWVSRVTEALSANFN 755
Query: 243 DGGLVKMDM-ESEVFPMDCCEQKESSSSSPR-VENIVEGNGPCCSRSHVSSEVVQSEPQR 300
K D+ E V D ++K + R + + V+ C S + + Q Q
Sbjct: 756 H----KKDLIELRVMLEDAEDRKYPENDLFRKLRDAVKEAETCASVAQLLLSKKQKHRQS 811
Query: 301 GTSGLSASHVSVNSHNEG-----------NDETQVMNKKAKVK--HEVCIDLNMDVIPDG 347
SG + + ++V + QV N V+ HE + MD PD
Sbjct: 812 PDSGRTRTKLTVEELKAFVQQLFSLPCVISQARQVKNLLDDVEEFHERAQEAMMDETPDS 871
Query: 348 NESKLLL 354
++ ++L+
Sbjct: 872 SKLQMLI 878
>WB|WBGene00004319 [details] [associations]
symbol:rbr-2 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0008340
"determination of adult lifespan" evidence=IMP] [GO:0034648
"histone demethylase activity (H3-dimethyl-K4 specific)"
evidence=IDA] [GO:0034647 "histone demethylase activity
(H3-trimethyl-K4 specific)" evidence=IDA] [GO:0034720 "histone
H3-K4 demethylation" evidence=IMP;IDA] [GO:0040028 "regulation of
vulval development" evidence=IMP] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005634 GO:GO:0008340 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0006351
GO:GO:0016706 GO:GO:0016702 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0034648 GO:GO:0040028 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 EMBL:Z69385 eggNOG:NOG327026
GeneTree:ENSGT00530000063118 GO:GO:0034647 KO:K11446 HSSP:Q14839
PIR:T27924 RefSeq:NP_502032.2 ProteinModelPortal:Q23541 SMR:Q23541
STRING:Q23541 PaxDb:Q23541 EnsemblMetazoa:ZK593.4 GeneID:177985
KEGG:cel:CELE_ZK593.4 UCSC:ZK593.4 CTD:177985 WormBase:ZK593.4
HOGENOM:HOG000113216 InParanoid:Q23541 OMA:KANQLLF NextBio:899238
Uniprot:Q23541
Length = 1477
Score = 289 (106.8 bits), Expect = 1.8e-21, P = 1.8e-21
Identities = 74/214 (34%), Positives = 113/214 (52%)
Query: 8 TQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLAHGQQ 67
T +P +L++ GVP++ V Q++GEFV+TFPRAYH+GFN G N AEAVN AP+DWL+ G++
Sbjct: 569 TAANPHLLRSLGVPIHSVHQNAGEFVITFPRAYHAGFNEGLNFAEAVNFAPIDWLSKGRE 628
Query: 68 AVELYSEQHRKTSLSHDKLLFGSVQAAIKALWELSVLQKKTPGNRKWKDACGKDGVLTKA 127
VE YS R SHD+LLF V+A K +S+ + K ++ +
Sbjct: 629 CVESYSNVRRYLVFSHDELLFKMVEAMDKLGISMSLATHEELIRIYEKQKMLRELLARLG 688
Query: 128 IKTRVQMKKEGLQKLPSYFKLQKMEIDFDLKTERECFSCFYDLHLSAAGCKCSPDRFACL 187
+ R QM++ +K+P +R C C L + A C + C+
Sbjct: 689 VSNR-QMQQVMFEKIPD--------------EQRSCRFCKTTLFMCALVCN-KHKKMTCV 732
Query: 188 KHANIFC-SCEI-DHRFVILRYSTDELNTLVEAL 219
+H + C SC D+R+ R+ D+LN + + L
Sbjct: 733 EHHDHLCNSCTTKDYRYQY-RFELDQLNNMCDEL 765
>UNIPROTKB|Q23541 [details] [associations]
symbol:rbr-2 "Lysine-specific demethylase rbr-2"
species:6239 "Caenorhabditis elegans" [GO:0034721 "histone H3-K4
demethylation, trimethyl-H3-K4-specific" evidence=IDA]
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249
SMART:SM00501 SMART:SM00558 GO:GO:0005634 GO:GO:0008340
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006351 GO:GO:0016706 GO:GO:0016702 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648 GO:GO:0040028
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 EMBL:Z69385
eggNOG:NOG327026 GeneTree:ENSGT00530000063118 GO:GO:0034647
KO:K11446 HSSP:Q14839 PIR:T27924 RefSeq:NP_502032.2
ProteinModelPortal:Q23541 SMR:Q23541 STRING:Q23541 PaxDb:Q23541
EnsemblMetazoa:ZK593.4 GeneID:177985 KEGG:cel:CELE_ZK593.4
UCSC:ZK593.4 CTD:177985 WormBase:ZK593.4 HOGENOM:HOG000113216
InParanoid:Q23541 OMA:KANQLLF NextBio:899238 Uniprot:Q23541
Length = 1477
Score = 289 (106.8 bits), Expect = 1.8e-21, P = 1.8e-21
Identities = 74/214 (34%), Positives = 113/214 (52%)
Query: 8 TQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLAHGQQ 67
T +P +L++ GVP++ V Q++GEFV+TFPRAYH+GFN G N AEAVN AP+DWL+ G++
Sbjct: 569 TAANPHLLRSLGVPIHSVHQNAGEFVITFPRAYHAGFNEGLNFAEAVNFAPIDWLSKGRE 628
Query: 68 AVELYSEQHRKTSLSHDKLLFGSVQAAIKALWELSVLQKKTPGNRKWKDACGKDGVLTKA 127
VE YS R SHD+LLF V+A K +S+ + K ++ +
Sbjct: 629 CVESYSNVRRYLVFSHDELLFKMVEAMDKLGISMSLATHEELIRIYEKQKMLRELLARLG 688
Query: 128 IKTRVQMKKEGLQKLPSYFKLQKMEIDFDLKTERECFSCFYDLHLSAAGCKCSPDRFACL 187
+ R QM++ +K+P +R C C L + A C + C+
Sbjct: 689 VSNR-QMQQVMFEKIPD--------------EQRSCRFCKTTLFMCALVCN-KHKKMTCV 732
Query: 188 KHANIFC-SCEI-DHRFVILRYSTDELNTLVEAL 219
+H + C SC D+R+ R+ D+LN + + L
Sbjct: 733 EHHDHLCNSCTTKDYRYQY-RFELDQLNNMCDEL 765
>UNIPROTKB|F1MUR2 [details] [associations]
symbol:KDM5B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0034648 "histone demethylase
activity (H3-dimethyl-K4 specific)" evidence=IEA] [GO:0034647
"histone demethylase activity (H3-trimethyl-K4 specific)"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0003714 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648
Gene3D:1.10.150.60 SUPFAM:SSF46774 GeneTree:ENSGT00530000063118
GO:GO:0034647 OMA:CENEKEM EMBL:DAAA02043305 IPI:IPI01001710
Ensembl:ENSBTAT00000028871 Uniprot:F1MUR2
Length = 1484
Score = 233 (87.1 bits), Expect = 2.0e-21, Sum P(3) = 2.0e-21
Identities = 47/85 (55%), Positives = 57/85 (67%)
Query: 3 LVEQVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWL 62
L + VT ++P+ L VPVY Q +GEFV+TFPRAYHSGFN GFN AEAVN VDWL
Sbjct: 489 LHQLVTIMNPNTLMTHEVPVYRTNQCAGEFVITFPRAYHSGFNQGFNFAEAVNFCTVDWL 548
Query: 63 AHGQQAVELYSEQHRKTSLSHDKLL 87
G+Q VE Y HR SHD+++
Sbjct: 549 PLGRQCVEHYRLLHRYCVFSHDEMI 573
Score = 116 (45.9 bits), Expect = 2.0e-21, Sum P(3) = 2.0e-21
Identities = 27/96 (28%), Positives = 47/96 (48%)
Query: 136 KEGLQKLPSYFKLQKMEIDFDLKTERECFSCFYDLHLSAAGCKCSPDRFACLKHANIFCS 195
+E ++KL ++M+ + ER+C C +SA C C P CL H CS
Sbjct: 606 RETVRKL-GVIDSERMDFELLPDDERQCVKCKTTCFMSALSCCCKPGLLVCLHHVQELCS 664
Query: 196 CEIDHRFVI-LRYSTDELNTLVEALEGGLDALKELA 230
C +++ + RY+ D+L ++ AL+ ++ E A
Sbjct: 665 CP-PYKYKLRYRYTLDDLYPMMNALKLRAESYNEWA 699
Score = 42 (19.8 bits), Expect = 2.0e-21, Sum P(3) = 2.0e-21
Identities = 15/61 (24%), Positives = 26/61 (42%)
Query: 232 KNFKWADCSDTDGGLVKMDMESEVFPMDCCEQKESSSSSPRVENIVEGNGPCCSRSHVSS 291
K K + DTD ++ + E+ P + S SSS E+ + + C + S +
Sbjct: 1376 KRIKLSHPKDTDSLKLERECSYELAPSADTQSLPSDSSSSEQEDSEDEDAICPAVSCLQP 1435
Query: 292 E 292
E
Sbjct: 1436 E 1436
Score = 37 (18.1 bits), Expect = 6.4e-21, Sum P(3) = 6.4e-21
Identities = 15/59 (25%), Positives = 24/59 (40%)
Query: 357 SHGKEAIENLKAHLSACYQEKVLCSGTVKEQDTMQVRSDCNSSNSHKDPNKDQPSCSRV 415
SH K+ ++LK Y+ DT + SD +SS+ +D + C V
Sbjct: 1381 SHPKDT-DSLKLERECSYE-------LAPSADTQSLPSD-SSSSEQEDSEDEDAICPAV 1430
>UNIPROTKB|F1NN75 [details] [associations]
symbol:KDM5A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0019907 "cyclin-dependent
protein kinase activating kinase holoenzyme complex" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0003677 "DNA binding" evidence=ISS]
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249
SMART:SM00501 SMART:SM00558 GO:GO:0005737 GO:GO:0045893
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0003682
GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0019907
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 OMA:ECSKPRE EMBL:AADN02006480
IPI:IPI00571489 Ensembl:ENSGALT00000021199 Uniprot:F1NN75
Length = 1696
Score = 229 (85.7 bits), Expect = 2.2e-20, Sum P(3) = 2.2e-20
Identities = 46/86 (53%), Positives = 57/86 (66%)
Query: 3 LVEQVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWL 62
L + VT ++P+VL GVPVY Q +GEFV+TFPRAYHSGFN G+N AEAVN DWL
Sbjct: 536 LHQLVTIMNPNVLMEHGVPVYRTNQCAGEFVVTFPRAYHSGFNQGYNFAEAVNFCTADWL 595
Query: 63 AHGQQAVELYSEQHRKTSLSHDKLLF 88
G+Q V Y R SH++L+F
Sbjct: 596 PIGRQCVSHYRRLGRHCVFSHEELIF 621
Score = 116 (45.9 bits), Expect = 2.2e-20, Sum P(3) = 2.2e-20
Identities = 20/57 (35%), Positives = 33/57 (57%)
Query: 160 ERECFSCFYDLHLSAAGCKCSPDRFACLKHANIFCSCEIDHRFVILRYSTDELNTLV 216
ER+C +C LSA C C+P+R CL H + C C + ++ + RY ++L +L+
Sbjct: 676 ERQCTACRTTCFLSALTCSCNPERLVCLYHPSDLCPCPMQNKCLRYRYPLEDLPSLL 732
Score = 52 (23.4 bits), Expect = 8.7e-15, Sum P(2) = 8.7e-15
Identities = 26/90 (28%), Positives = 40/90 (44%)
Query: 73 SEQHRKTSLSHDKLLFGSVQAAIKALWELSVLQKKTPGNRKWKDACGKDGVLTKAIKTRV 132
SE+ RK L + FG ++ K EL L+K P +K K K L K K
Sbjct: 1506 SERKRKRKLERAEQFFGDMKQKSK---ELKKLEK--PKKKKLKLTMDKTKELNKLAKKLA 1560
Query: 133 QMKKEGLQKLPSYFKLQKMEIDFDLKTERE 162
K+E +K + K+E+ + TE++
Sbjct: 1561 --KEEERKKKREKAVVAKVELAKE-STEKK 1587
Score = 38 (18.4 bits), Expect = 2.2e-20, Sum P(3) = 2.2e-20
Identities = 10/38 (26%), Positives = 19/38 (50%)
Query: 638 EAETKSKIFGVALMDEDQNSPSGQNSVEEEAQLVLRGL 675
EAET + + + L + ++S Q+S +L + L
Sbjct: 793 EAETCASVAQLLLSKKQKHSRQSQDSGRTRTKLTMEEL 830
Score = 38 (18.4 bits), Expect = 1.3e-19, Sum P(4) = 1.3e-19
Identities = 12/39 (30%), Positives = 19/39 (48%)
Query: 323 QVMNKKAKVK--HEVCIDLNMDVIPDGNESKLLLSDSHG 359
QV N V+ HE + MD +PD ++ + L+ G
Sbjct: 849 QVKNLLDDVEEFHERAQEAMMDEVPDSSKLQELIDMGSG 887
Score = 37 (18.1 bits), Expect = 1.3e-19, Sum P(4) = 1.3e-19
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 618 LTFGKTTEVNKNSSSGLSCSEAETKSK 644
LT KT E+NK + L+ E E K K
Sbjct: 1544 LTMDKTKELNKLAKK-LA-KEEERKKK 1568
>ZFIN|ZDB-GENE-060810-94 [details] [associations]
symbol:kdm5c "lysine (K)-specific demethylase 5C"
species:7955 "Danio rerio" [GO:0055114 "oxidation-reduction
process" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016706 "oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0043524 "negative regulation of neuron apoptotic
process" evidence=IMP] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
ZFIN:ZDB-GENE-060810-94 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0043524 GO:GO:0016706 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 GeneTree:ENSGT00530000063118 KO:K11446
HOGENOM:HOG000290719 CTD:8242 OMA:ISWQGRA HOVERGEN:HBG068574
EMBL:BX537348 IPI:IPI00611775 RefSeq:NP_001116706.1
UniGene:Dr.75967 SMR:B0S6L0 Ensembl:ENSDART00000098657
Ensembl:ENSDART00000127053 GeneID:553406 KEGG:dre:553406
NextBio:20880164 Uniprot:B0S6L0
Length = 1578
Score = 210 (79.0 bits), Expect = 3.3e-20, Sum P(2) = 3.3e-20
Identities = 41/84 (48%), Positives = 55/84 (65%)
Query: 3 LVEQVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWL 62
L + VT ++P++L + GVPV Q +GEFV+TFPRAYHSGFN G+N AEAVN DWL
Sbjct: 598 LHQLVTIMNPNILMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADWL 657
Query: 63 AHGQQAVELYSEQHRKTSLSHDKL 86
G+ +E Y + R S ++L
Sbjct: 658 PTGRSCIEHYRQLRRYCVFSQEEL 681
Score = 123 (48.4 bits), Expect = 3.3e-20, Sum P(2) = 3.3e-20
Identities = 32/106 (30%), Positives = 53/106 (50%)
Query: 160 ERECFSCFYDLHLSAAGCKCSPDRFACLKHANIFCSCEIDHRFVILRYSTDELNTLVEAL 219
ER+C C LSA C P+R CL HA CSC + ++ RY+ DEL ++ L
Sbjct: 738 ERQCDKCKTTCFLSALACSNCPERLVCLYHAQDLCSCPSEKLYLRYRYTLDELLAMLHRL 797
Query: 220 EGGLDALKELASKNFKWADCSDTDGGLVKMDMES-EVFPMDCCEQK 264
+ ++ A++ K + + D G K+D++ EV + ++K
Sbjct: 798 KVRAESFDSWANR-VK--EALEQDEGN-KIDIKDLEVLKEEAADKK 839
Score = 37 (18.1 bits), Expect = 2.9e-11, Sum P(2) = 2.9e-11
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 194 CSCEIDHRFVILRYSTDELNTLVEALE 220
CS E+ R + EL TLV+ ++
Sbjct: 862 CSTELLSNSQSSRMTLKELKTLVDTMQ 888
>DICTYBASE|DDB_G0268778 [details] [associations]
symbol:rbbB "putative Retinoblastoma (Rb) binding
protein" species:44689 "Dictyostelium discoideum" [GO:0005622
"intracellular" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] InterPro:IPR001606 InterPro:IPR003347
Pfam:PF01388 Pfam:PF02373 PROSITE:PS51011 PROSITE:PS51184
SMART:SM00558 dictyBase:DDB_G0268778 GO:GO:0005634
GenomeReviews:CM000150_GR GO:GO:0003677 GO:GO:0003700
EMBL:AAFI02000004 GO:GO:0006366 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
eggNOG:NOG327026 RefSeq:XP_646956.1 ProteinModelPortal:Q55ER4
EnsemblProtists:DDB0220639 GeneID:8616646 KEGG:ddi:DDB_G0268778
InParanoid:Q55ER4 OMA:ENEFWRI Uniprot:Q55ER4
Length = 1198
Score = 253 (94.1 bits), Expect = 1.4e-16, Sum P(3) = 1.4e-16
Identities = 60/171 (35%), Positives = 90/171 (52%)
Query: 7 VTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLAHGQ 66
+T +SP V K VP+Y +Q GE+V+TFP+AYH+GF+ GF AEAVN AP DW+ G
Sbjct: 817 ITMISPDVFKRRHVPIYKCLQGPGEYVITFPQAYHAGFSHGFTIAEAVNFAPPDWIPFGS 876
Query: 67 QAVELYSEQHRKTSLSHDKLLFGSVQAAIKALWELSVLQKKTPGNRKWKDACGKDGVLTK 126
++E Y E HR + SHD+LL+ + + +LSV K K K+ ++ +L +
Sbjct: 877 SSIERYQETHRSSVFSHDQLLYTIANRSPSS--DLSVWLSKEFQKIKSKENSLRNQLLKR 934
Query: 127 AIKTRVQMKKEGLQKLPSYFKLQKMEIDFDLKTERECFSCFYDLHLSAAGC 177
++ ++ Q++ + LQ CF C YD LS C
Sbjct: 935 NPTLIIEKSQKSTQEILNNEPLQ-------------CFVCKYDCFLSFIQC 972
Score = 44 (20.5 bits), Expect = 1.4e-16, Sum P(3) = 1.4e-16
Identities = 11/42 (26%), Positives = 20/42 (47%)
Query: 437 QQSKLPLVDFLKTDTINGSNVRTSVTDQRFQKKLETCVEPIN 478
QQ + P+ T T N +N + Q+ Q+ ++PI+
Sbjct: 1102 QQQQQPIQP-TSTSTSNSNNNNNIIQQQQQQQSTPLTIKPIS 1142
Score = 42 (19.8 bits), Expect = 1.4e-16, Sum P(3) = 1.4e-16
Identities = 8/37 (21%), Positives = 19/37 (51%)
Query: 183 RFACLKHANIFCSCEIDHRFVILRYSTDELNTLVEAL 219
+ CL H C C + + +I +S ++L+ + ++
Sbjct: 1034 KICCLSHFEDLCDC--NKKKLISIFSIEDLDKTISSV 1068
Score = 42 (19.8 bits), Expect = 1.4e-16, Sum P(3) = 1.4e-16
Identities = 11/41 (26%), Positives = 21/41 (51%)
Query: 313 NSHNEGNDETQVMNKKAKVKHEVCIDLNMDVIPDGNESKLL 353
N++N N+ NK K+ C+ + + + D N+ KL+
Sbjct: 1017 NNNNNNNNNNNSNNKTIKI---CCLS-HFEDLCDCNKKKLI 1053
Score = 41 (19.5 bits), Expect = 1.8e-16, Sum P(3) = 1.8e-16
Identities = 10/35 (28%), Positives = 17/35 (48%)
Query: 397 NSSNSHKDPNKD-QPSCSRVIEGTCSFDVKKLFGV 430
N++N++ NK + C E C + KKL +
Sbjct: 1021 NNNNNNNSNNKTIKICCLSHFEDLCDCNKKKLISI 1055
Score = 40 (19.1 bits), Expect = 3.6e-16, Sum P(3) = 3.6e-16
Identities = 7/50 (14%), Positives = 25/50 (50%)
Query: 262 EQKESSSSSPRVENIVEGNGPCCSRSHVSSEVVQSEPQRGTSGLSASHVS 311
+Q++ + + ++ S S+ ++ ++Q + Q+ ++ L+ +S
Sbjct: 1093 QQQQQQQQQQQQQQPIQPTSTSTSNSNNNNNIIQQQQQQQSTPLTIKPIS 1142
>UNIPROTKB|D4A3B4 [details] [associations]
symbol:D4A3B4 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016706 "oxidoreductase activity, acting on
paired donors, with incorporation or reduction of molecular oxygen,
2-oxoglutarate as one donor, and incorporation of one atom each of
oxygen into both donors" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00558
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 IPI:IPI00949627
Ensembl:ENSRNOT00000067288 ArrayExpress:D4A3B4 Uniprot:D4A3B4
Length = 1490
Score = 239 (89.2 bits), Expect = 9.4e-15, Sum P(2) = 9.4e-15
Identities = 62/184 (33%), Positives = 92/184 (50%)
Query: 3 LVEQVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWL 62
L + VT ++P+ L + GVPV Q +GEFV+TFPRAYHSGFN G+N AEAVN DWL
Sbjct: 523 LHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADWL 582
Query: 63 AHGQQAVELYSEQHRKTSLSHDKLLFGSVQAAIKALWELSVLQKKTPGNRKWKDACGKDG 122
G+Q +E Y R SH++L+ K L+ K ++ +
Sbjct: 583 PAGRQCIEHYRRLRRYCVFSHEELICKMAACPEKLDLNLAAAVHKEMFIMVQEERRLRKA 642
Query: 123 VLTKAIKTRVQMKKEGLQKLPSYFKLQKMEIDFDLKTERECF-SCFYDLHLSAAG--CKC 179
+L K + + K++GL+ P +L + ++ + CF F + +S CKC
Sbjct: 643 LLEKGLS---EAKRQGLKTEPKDVRLCINCVTTEMMSANPCFVKPFVFILISHXNGLCKC 699
Query: 180 SPDR 183
S R
Sbjct: 700 SSSR 703
Score = 40 (19.1 bits), Expect = 9.4e-15, Sum P(2) = 9.4e-15
Identities = 11/46 (23%), Positives = 21/46 (45%)
Query: 576 HPQSLQSIDGLEMFGFLS-SP----IIQAIEALDPNHLCMEYWNHK 616
H L+S + +M GFL +P +I + + + + W H+
Sbjct: 1020 HVNMLRSTENKQMSGFLKKTPWNAQVISIVANIGARAMAEDIWVHQ 1065
>UNIPROTKB|A1YVX4 [details] [associations]
symbol:KDM5C "Lysine-specific demethylase 5C" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0016702
"oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016706 "oxidoreductase activity,
acting on paired donors, with incorporation or reduction of
molecular oxygen, 2-oxoglutarate as one donor, and incorporation of
one atom each of oxygen into both donors" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 GO:GO:0005634
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006351 GO:GO:0016568 GO:GO:0016706 GO:GO:0016702
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 eggNOG:NOG327026
KO:K11446 CTD:8242 EMBL:EF139241 RefSeq:NP_001090902.1
UniGene:Ssc.25162 ProteinModelPortal:A1YVX4 SMR:A1YVX4
GeneID:100037295 KEGG:ssc:100037295 Uniprot:A1YVX4
Length = 1516
Score = 222 (83.2 bits), Expect = 3.3e-14, P = 3.3e-14
Identities = 63/186 (33%), Positives = 90/186 (48%)
Query: 3 LVEQVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWL 62
L + VT ++P+ L + GVPV Q +GEFV+TFPRAYHSGFN G+N AEAVN DWL
Sbjct: 523 LHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADWL 582
Query: 63 AHGQQAVELYSEQHRKTSLSHDKLLFGSVQAAIKALWELSVLQKKTPGNRKWKDACGKDG 122
G+Q +E Y R SH++L+ K L+ K ++ +
Sbjct: 583 PAGRQCIEHYRRLRRYCVFSHEELICKMAACPEKLDLNLAAAVHKEMFIMVQEERRLRKA 642
Query: 123 VLTKAIKTRVQMKKEGLQKLPSYFK-LQKMEIDFDLKTERECFSCFYDL----HLSAAGC 177
+L K I + ++E + LP + K + L C+ C L H++ C
Sbjct: 643 LLEKGI---TEAEREAFELLPDDERQCIKCKTTCFLSA-LACYDCPDGLVCLSHINDL-C 697
Query: 178 KCSPDR 183
KCS R
Sbjct: 698 KCSSSR 703
Score = 125 (49.1 bits), Expect = 0.00092, P = 0.00092
Identities = 42/175 (24%), Positives = 76/175 (43%)
Query: 160 ERECFSCFYDLHLSAAGCKCSPDRFACLKHANIFCSCEIDHRFVILRYSTDELNTLVEAL 219
ER+C C LSA C PD CL H N C C +++ RY+ DEL ++ L
Sbjct: 663 ERQCIKCKTTCFLSALACYDCPDGLVCLSHINDLCKCSSSRQYLRYRYTLDELPAMLHKL 722
Query: 220 EGGLDALKELASKNFKWADCSDTDGGLVKMDMESEVFPMDCCEQK-ESSSSSPRVENIVE 278
+ ++ A+K + A + + G + E + E++ +S R++N +
Sbjct: 723 KVRAESFDTWANK-VRVA--LEVEDGRKRSLEELRALESEARERRFPNSELLQRLKNCLS 779
Query: 279 GNGPCCSRSHVSSEVVQSEPQRGTSGLSASHVSVNSH-NEGNDETQVMNKKAKVK 332
C SR+ ++ P R +GL + + + ++ N+ M++ VK
Sbjct: 780 EAEACVSRALGLVSGQEAGPHR-VAGLQMTLAELRAFLDQMNNLPCAMHQIGDVK 833
>UNIPROTKB|F1RUI7 [details] [associations]
symbol:KDM5C "Lysine-specific demethylase 5C" species:9823
"Sus scrofa" [GO:0032453 "histone demethylase activity (H3-K4
specific)" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0016706 "oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00558
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 GO:GO:0032453 OMA:ISWQGRA
EMBL:FP102491 Ensembl:ENSSSCT00000013473 ArrayExpress:F1RUI7
Uniprot:F1RUI7
Length = 1516
Score = 222 (83.2 bits), Expect = 3.3e-14, P = 3.3e-14
Identities = 63/186 (33%), Positives = 90/186 (48%)
Query: 3 LVEQVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWL 62
L + VT ++P+ L + GVPV Q +GEFV+TFPRAYHSGFN G+N AEAVN DWL
Sbjct: 523 LHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADWL 582
Query: 63 AHGQQAVELYSEQHRKTSLSHDKLLFGSVQAAIKALWELSVLQKKTPGNRKWKDACGKDG 122
G+Q +E Y R SH++L+ K L+ K ++ +
Sbjct: 583 PAGRQCIEHYRRLRRYCVFSHEELICKMAACPEKLDLNLAAAVHKEMFIMVQEERRLRKA 642
Query: 123 VLTKAIKTRVQMKKEGLQKLPSYFK-LQKMEIDFDLKTERECFSCFYDL----HLSAAGC 177
+L K I + ++E + LP + K + L C+ C L H++ C
Sbjct: 643 LLEKGI---TEAEREAFELLPDDERQCIKCKTTCFLSA-LACYDCPDGLVCLSHINDL-C 697
Query: 178 KCSPDR 183
KCS R
Sbjct: 698 KCSSSR 703
Score = 125 (49.1 bits), Expect = 0.00092, P = 0.00092
Identities = 42/175 (24%), Positives = 76/175 (43%)
Query: 160 ERECFSCFYDLHLSAAGCKCSPDRFACLKHANIFCSCEIDHRFVILRYSTDELNTLVEAL 219
ER+C C LSA C PD CL H N C C +++ RY+ DEL ++ L
Sbjct: 663 ERQCIKCKTTCFLSALACYDCPDGLVCLSHINDLCKCSSSRQYLRYRYTLDELPAMLHKL 722
Query: 220 EGGLDALKELASKNFKWADCSDTDGGLVKMDMESEVFPMDCCEQK-ESSSSSPRVENIVE 278
+ ++ A+K + A + + G + E + E++ +S R++N +
Sbjct: 723 KVRAESFDTWANK-VRVA--LEVEDGRKRSLEELRALESEARERRFPNSELLQRLKNCLS 779
Query: 279 GNGPCCSRSHVSSEVVQSEPQRGTSGLSASHVSVNSH-NEGNDETQVMNKKAKVK 332
C SR+ ++ P R +GL + + + ++ N+ M++ VK
Sbjct: 780 EAEACVSRALGLVSGQEAGPHR-VAGLQMTLAELRAFLDQMNNLPCAMHQIGDVK 833
>UNIPROTKB|E2R0S2 [details] [associations]
symbol:KDM5C "Lysine-specific demethylase 5C" species:9615
"Canis lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
[GO:0016706 "oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 OMA:ISWQGRA EMBL:AAEX03026384
Ensembl:ENSCAFT00000025665 Uniprot:E2R0S2
Length = 1520
Score = 222 (83.2 bits), Expect = 3.3e-14, P = 3.3e-14
Identities = 63/186 (33%), Positives = 90/186 (48%)
Query: 3 LVEQVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWL 62
L + VT ++P+ L + GVPV Q +GEFV+TFPRAYHSGFN G+N AEAVN DWL
Sbjct: 564 LHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADWL 623
Query: 63 AHGQQAVELYSEQHRKTSLSHDKLLFGSVQAAIKALWELSVLQKKTPGNRKWKDACGKDG 122
G+Q +E Y R SH++L+ K L+ K ++ +
Sbjct: 624 PAGRQCIEHYRRLRRYCVFSHEELICKMAACPEKLDLNLAAAVHKEMFIMVQEERRLRKA 683
Query: 123 VLTKAIKTRVQMKKEGLQKLPSYFK-LQKMEIDFDLKTERECFSCFYDL----HLSAAGC 177
+L K I + ++E + LP + K + L C+ C L H++ C
Sbjct: 684 LLEKGI---TEAEREAFELLPDDERQCIKCKTTCFLSA-LACYDCPDGLVCLSHINDL-C 738
Query: 178 KCSPDR 183
KCS R
Sbjct: 739 KCSSSR 744
Score = 125 (49.1 bits), Expect = 0.00093, P = 0.00093
Identities = 42/175 (24%), Positives = 76/175 (43%)
Query: 160 ERECFSCFYDLHLSAAGCKCSPDRFACLKHANIFCSCEIDHRFVILRYSTDELNTLVEAL 219
ER+C C LSA C PD CL H N C C +++ RY+ DEL ++ L
Sbjct: 704 ERQCIKCKTTCFLSALACYDCPDGLVCLSHINDLCKCSSSRQYLRYRYTLDELPAMLHKL 763
Query: 220 EGGLDALKELASKNFKWADCSDTDGGLVKMDMESEVFPMDCCEQK-ESSSSSPRVENIVE 278
+ ++ A+K + A + + G + E + E++ +S R++N +
Sbjct: 764 KVRAESFDTWANK-VRVA--LEVEDGRKRSLEELRALESEARERRFPNSELLQRLKNCLS 820
Query: 279 GNGPCCSRSHVSSEVVQSEPQRGTSGLSASHVSVNSH-NEGNDETQVMNKKAKVK 332
C SR+ ++ P R +GL + + + ++ N+ M++ VK
Sbjct: 821 EAEACVSRALGLVSGQEAGPHR-VAGLQMTLAELRAFLDQMNNLPCAMHQIGDVK 874
>UNIPROTKB|Q38JA7 [details] [associations]
symbol:KDM5C "Lysine-specific demethylase 5C" species:9615
"Canis lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016706 "oxidoreductase activity,
acting on paired donors, with incorporation or reduction of
molecular oxygen, 2-oxoglutarate as one donor, and incorporation of
one atom each of oxygen into both donors" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0006351 GO:GO:0016568 GO:GO:0016706
GO:GO:0016702 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774 HSSP:O43918
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
eggNOG:NOG327026 KO:K11446 EMBL:DQ223016 RefSeq:NP_001041497.1
UniGene:Cfa.46487 ProteinModelPortal:Q38JA7 SMR:Q38JA7 PRIDE:Q38JA7
GeneID:491894 KEGG:cfa:491894 CTD:8242 InParanoid:Q38JA7
OrthoDB:EOG4894KP NextBio:20864597 Uniprot:Q38JA7
Length = 1556
Score = 222 (83.2 bits), Expect = 3.4e-14, P = 3.4e-14
Identities = 63/186 (33%), Positives = 90/186 (48%)
Query: 3 LVEQVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWL 62
L + VT ++P+ L + GVPV Q +GEFV+TFPRAYHSGFN G+N AEAVN DWL
Sbjct: 564 LHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADWL 623
Query: 63 AHGQQAVELYSEQHRKTSLSHDKLLFGSVQAAIKALWELSVLQKKTPGNRKWKDACGKDG 122
G+Q +E Y R SH++L+ K L+ K ++ +
Sbjct: 624 PAGRQCIEHYRRLRRYCVFSHEELICKMAACPEKLDLNLAAAVHKEMFIMVQEERRLRKA 683
Query: 123 VLTKAIKTRVQMKKEGLQKLPSYFK-LQKMEIDFDLKTERECFSCFYDL----HLSAAGC 177
+L K I + ++E + LP + K + L C+ C L H++ C
Sbjct: 684 LLEKGI---TEAEREAFELLPDDERQCIKCKTTCFLSA-LACYDCPDGLVCLSHINDL-C 738
Query: 178 KCSPDR 183
KCS R
Sbjct: 739 KCSSSR 744
Score = 125 (49.1 bits), Expect = 0.00095, P = 0.00095
Identities = 42/175 (24%), Positives = 76/175 (43%)
Query: 160 ERECFSCFYDLHLSAAGCKCSPDRFACLKHANIFCSCEIDHRFVILRYSTDELNTLVEAL 219
ER+C C LSA C PD CL H N C C +++ RY+ DEL ++ L
Sbjct: 704 ERQCIKCKTTCFLSALACYDCPDGLVCLSHINDLCKCSSSRQYLRYRYTLDELPAMLHKL 763
Query: 220 EGGLDALKELASKNFKWADCSDTDGGLVKMDMESEVFPMDCCEQK-ESSSSSPRVENIVE 278
+ ++ A+K + A + + G + E + E++ +S R++N +
Sbjct: 764 KVRAESFDTWANK-VRVA--LEVEDGRKRSLEELRALESEARERRFPNSELLQRLKNCLS 820
Query: 279 GNGPCCSRSHVSSEVVQSEPQRGTSGLSASHVSVNSH-NEGNDETQVMNKKAKVK 332
C SR+ ++ P R +GL + + + ++ N+ M++ VK
Sbjct: 821 EAEACVSRALGLVSGQEAGPHR-VAGLQMTLAELRAFLDQMNNLPCAMHQIGDVK 874
>UNIPROTKB|B0QZ44 [details] [associations]
symbol:KDM5C "Smcy homolog, X-linked (Mouse), isoform
CRA_a" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016706 "oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249
SMART:SM00501 SMART:SM00558 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 EMBL:CH471154 EMBL:AL139396 HOGENOM:HOG000290719
UniGene:Hs.631768 HGNC:HGNC:11114 ChiTaRS:KDM5C IPI:IPI00879547
SMR:B0QZ44 Ensembl:ENST00000404049 UCSC:uc004dsa.3
HOVERGEN:HBG068574 Uniprot:B0QZ44
Length = 1559
Score = 222 (83.2 bits), Expect = 3.4e-14, P = 3.4e-14
Identities = 63/186 (33%), Positives = 90/186 (48%)
Query: 3 LVEQVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWL 62
L + VT ++P+ L + GVPV Q +GEFV+TFPRAYHSGFN G+N AEAVN DWL
Sbjct: 563 LHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADWL 622
Query: 63 AHGQQAVELYSEQHRKTSLSHDKLLFGSVQAAIKALWELSVLQKKTPGNRKWKDACGKDG 122
G+Q +E Y R SH++L+ K L+ K ++ +
Sbjct: 623 PAGRQCIEHYRRLRRYCVFSHEELICKMAACPEKLDLNLAAAVHKEMFIMVQEERRLRKA 682
Query: 123 VLTKAIKTRVQMKKEGLQKLPSYFK-LQKMEIDFDLKTERECFSCFYDL----HLSAAGC 177
+L K I + ++E + LP + K + L C+ C L H++ C
Sbjct: 683 LLEKGI---TEAEREAFELLPDDERQCIKCKTTCFLSA-LACYDCPDGLVCLSHINDL-C 737
Query: 178 KCSPDR 183
KCS R
Sbjct: 738 KCSSSR 743
>UNIPROTKB|K7GNM7 [details] [associations]
symbol:KDM5C "Lysine-specific demethylase 5C" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 EMBL:FP102491
Ensembl:ENSSSCT00000032687 Uniprot:K7GNM7
Length = 1560
Score = 222 (83.2 bits), Expect = 3.5e-14, P = 3.5e-14
Identities = 63/186 (33%), Positives = 90/186 (48%)
Query: 3 LVEQVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWL 62
L + VT ++P+ L + GVPV Q +GEFV+TFPRAYHSGFN G+N AEAVN DWL
Sbjct: 564 LHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADWL 623
Query: 63 AHGQQAVELYSEQHRKTSLSHDKLLFGSVQAAIKALWELSVLQKKTPGNRKWKDACGKDG 122
G+Q +E Y R SH++L+ K L+ K ++ +
Sbjct: 624 PAGRQCIEHYRRLRRYCVFSHEELICKMAACPEKLDLNLAAAVHKEMFIMVQEERRLRKA 683
Query: 123 VLTKAIKTRVQMKKEGLQKLPSYFK-LQKMEIDFDLKTERECFSCFYDL----HLSAAGC 177
+L K I + ++E + LP + K + L C+ C L H++ C
Sbjct: 684 LLEKGI---TEAEREAFELLPDDERQCIKCKTTCFLSA-LACYDCPDGLVCLSHINDL-C 738
Query: 178 KCSPDR 183
KCS R
Sbjct: 739 KCSSSR 744
Score = 125 (49.1 bits), Expect = 0.00095, P = 0.00095
Identities = 42/175 (24%), Positives = 76/175 (43%)
Query: 160 ERECFSCFYDLHLSAAGCKCSPDRFACLKHANIFCSCEIDHRFVILRYSTDELNTLVEAL 219
ER+C C LSA C PD CL H N C C +++ RY+ DEL ++ L
Sbjct: 704 ERQCIKCKTTCFLSALACYDCPDGLVCLSHINDLCKCSSSRQYLRYRYTLDELPAMLHKL 763
Query: 220 EGGLDALKELASKNFKWADCSDTDGGLVKMDMESEVFPMDCCEQK-ESSSSSPRVENIVE 278
+ ++ A+K + A + + G + E + E++ +S R++N +
Sbjct: 764 KVRAESFDTWANK-VRVA--LEVEDGRKRSLEELRALESEARERRFPNSELLQRLKNCLS 820
Query: 279 GNGPCCSRSHVSSEVVQSEPQRGTSGLSASHVSVNSH-NEGNDETQVMNKKAKVK 332
C SR+ ++ P R +GL + + + ++ N+ M++ VK
Sbjct: 821 EAEACVSRALGLVSGQEAGPHR-VAGLQMTLAELRAFLDQMNNLPCAMHQIGDVK 874
>UNIPROTKB|P41229 [details] [associations]
symbol:KDM5C "Lysine-specific demethylase 5C" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0032453 "histone demethylase activity (H3-K4
specific)" evidence=IDA] [GO:0034720 "histone H3-K4 demethylation"
evidence=IDA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0006351 GO:GO:0016706 GO:GO:0016702
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 EMBL:AL139396
eggNOG:NOG327026 GO:GO:0032453 KO:K11446 HOGENOM:HOG000290719
CTD:8242 OrthoDB:EOG4894KP EMBL:L25270 EMBL:AK304732 EMBL:BC054499
EMBL:Z29650 IPI:IPI00013185 IPI:IPI00219412 IPI:IPI00640875
IPI:IPI01012687 PIR:I54361 RefSeq:NP_001140174.1 RefSeq:NP_004178.2
UniGene:Hs.631768 PDB:2JRZ PDBsum:2JRZ ProteinModelPortal:P41229
SMR:P41229 DIP:DIP-39663N IntAct:P41229 STRING:P41229
PhosphoSite:P41229 DMDM:117949812 PaxDb:P41229 PRIDE:P41229
DNASU:8242 Ensembl:ENST00000375379 Ensembl:ENST00000375383
Ensembl:ENST00000375401 Ensembl:ENST00000452825 GeneID:8242
KEGG:hsa:8242 UCSC:uc004drz.3 GeneCards:GC0XM053237 HGNC:HGNC:11114
MIM:300534 MIM:314690 neXtProt:NX_P41229 Orphanet:85279
PharmGKB:PA35964 InParanoid:P41229 OMA:ISWQGRA PhylomeDB:P41229
ChiTaRS:KDM5C EvolutionaryTrace:P41229 GenomeRNAi:8242
NextBio:31002 ArrayExpress:P41229 Bgee:P41229 CleanEx:HS_JARID1C
Genevestigator:P41229 GermOnline:ENSG00000126012 Uniprot:P41229
Length = 1560
Score = 222 (83.2 bits), Expect = 3.5e-14, P = 3.5e-14
Identities = 63/186 (33%), Positives = 90/186 (48%)
Query: 3 LVEQVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWL 62
L + VT ++P+ L + GVPV Q +GEFV+TFPRAYHSGFN G+N AEAVN DWL
Sbjct: 564 LHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADWL 623
Query: 63 AHGQQAVELYSEQHRKTSLSHDKLLFGSVQAAIKALWELSVLQKKTPGNRKWKDACGKDG 122
G+Q +E Y R SH++L+ K L+ K ++ +
Sbjct: 624 PAGRQCIEHYRRLRRYCVFSHEELICKMAACPEKLDLNLAAAVHKEMFIMVQEERRLRKA 683
Query: 123 VLTKAIKTRVQMKKEGLQKLPSYFK-LQKMEIDFDLKTERECFSCFYDL----HLSAAGC 177
+L K I + ++E + LP + K + L C+ C L H++ C
Sbjct: 684 LLEKGI---TEAEREAFELLPDDERQCIKCKTTCFLSA-LACYDCPDGLVCLSHINDL-C 738
Query: 178 KCSPDR 183
KCS R
Sbjct: 739 KCSSSR 744
>UNIPROTKB|Q30DN6 [details] [associations]
symbol:KDM5D "Lysine-specific demethylase 5D" species:9615
"Canis lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016706 "oxidoreductase activity, acting on
paired donors, with incorporation or reduction of molecular oxygen,
2-oxoglutarate as one donor, and incorporation of one atom each of
oxygen into both donors" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249
SMART:SM00501 SMART:SM00558 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0016568 GO:GO:0016706
GO:GO:0016702 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774 HSSP:O43918
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
KO:K11446 EMBL:DQ156494 RefSeq:NP_001106929.1 UniGene:Cfa.38975
ProteinModelPortal:Q30DN6 SMR:Q30DN6 GeneID:100134936
KEGG:cfa:100134936 CTD:8284 NextBio:20789320 Uniprot:Q30DN6
Length = 1545
Score = 224 (83.9 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 64/186 (34%), Positives = 91/186 (48%)
Query: 3 LVEQVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWL 62
L + VT ++P+ L + GVPV Q +GEFV+TFPRAYHSGFN G+N AEAVN DWL
Sbjct: 557 LHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADWL 616
Query: 63 AHGQQAVELYSEQHRKTSLSHDKLLFGSVQAAIKALWELSVLQKKTPGNRKWKDACGKDG 122
G+Q +E Y R SH++L+ K L+V K ++ +
Sbjct: 617 PAGRQCIEHYRRLRRYCVFSHEELICKMAAFPEKLDLNLAVAVHKEMFIMVQEERRLRKA 676
Query: 123 VLTKAIKTRVQMKKEGLQKLPSYFK-LQKMEIDFDLKTERECFSCFYDL----HLSAAGC 177
+L K I + ++E + LP + K + L C+ C L H++ C
Sbjct: 677 LLEKGI---TEAEREAFELLPDDERQCIKCKTTCFLSA-LACYDCPDGLVCLSHINDL-C 731
Query: 178 KCSPDR 183
KCS R
Sbjct: 732 KCSSSR 737
Score = 45 (20.9 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 7/14 (50%), Positives = 10/14 (71%)
Query: 191 NIFCSCEIDHRFVI 204
NIF +C +DH V+
Sbjct: 1497 NIFLTCSVDHSSVL 1510
>MGI|MGI:99781 [details] [associations]
symbol:Kdm5c "lysine (K)-specific demethylase 5C"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0001085 "RNA polymerase II transcription factor binding"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0016706 "oxidoreductase activity, acting
on paired donors, with incorporation or reduction of molecular
oxygen, 2-oxoglutarate as one donor, and incorporation of one atom
each of oxygen into both donors" evidence=IEA] [GO:0032453 "histone
demethylase activity (H3-K4 specific)" evidence=ISO] [GO:0034720
"histone H3-K4 demethylation" evidence=ISO] [GO:0042802 "identical
protein binding" evidence=ISO] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
MGI:MGI:99781 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006351 GO:GO:0016706
GO:GO:0016702 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
eggNOG:NOG327026 GeneTree:ENSGT00530000063118 GO:GO:0032453
KO:K11446 CTD:8242 OrthoDB:EOG4894KP ChiTaRS:KDM5C EMBL:AF127245
EMBL:AK008105 EMBL:AK155279 EMBL:AK155427 EMBL:AK155651
EMBL:AK158340 EMBL:AK011577 EMBL:BC043096 EMBL:BC054550 EMBL:Z29651
EMBL:AK129096 EMBL:L29563 EMBL:AF039894 IPI:IPI00112611
IPI:IPI00221399 IPI:IPI00776021 PIR:I48775 PIR:I84689
RefSeq:NP_038696.2 UniGene:Mm.142655 ProteinModelPortal:P41230
SMR:P41230 STRING:P41230 PhosphoSite:P41230 PaxDb:P41230
PRIDE:P41230 Ensembl:ENSMUST00000082177 Ensembl:ENSMUST00000112584
Ensembl:ENSMUST00000112588 GeneID:20591 KEGG:mmu:20591
UCSC:uc009uqc.2 UCSC:uc009uqd.2 UCSC:uc009uqe.2 InParanoid:P41230
NextBio:298901 Bgee:P41230 Genevestigator:P41230
GermOnline:ENSMUSG00000025332 Uniprot:P41230
Length = 1554
Score = 222 (83.2 bits), Expect = 5.5e-13, Sum P(2) = 5.5e-13
Identities = 63/186 (33%), Positives = 90/186 (48%)
Query: 3 LVEQVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWL 62
L + VT ++P+ L + GVPV Q +GEFV+TFPRAYHSGFN G+N AEAVN DWL
Sbjct: 564 LHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADWL 623
Query: 63 AHGQQAVELYSEQHRKTSLSHDKLLFGSVQAAIKALWELSVLQKKTPGNRKWKDACGKDG 122
G+Q +E Y R SH++L+ K L+ K ++ +
Sbjct: 624 PAGRQCIEHYRRLRRYCVFSHEELICKMAACPEKLDLNLAAAVHKEMFIMVQEERRLRKA 683
Query: 123 VLTKAIKTRVQMKKEGLQKLPSYFK-LQKMEIDFDLKTERECFSCFYDL----HLSAAGC 177
+L K I + ++E + LP + K + L C+ C L H++ C
Sbjct: 684 LLEKGI---TEAEREAFELLPDDERQCIKCKTTCFLSA-LACYDCPDGLVCLSHINDL-C 738
Query: 178 KCSPDR 183
KCS R
Sbjct: 739 KCSSSR 744
Score = 41 (19.5 bits), Expect = 5.5e-13, Sum P(2) = 5.5e-13
Identities = 11/41 (26%), Positives = 20/41 (48%)
Query: 252 ESEVFPMDCCEQKESSSSSPRVENIVEGNGPCCSRSHVSSE 292
ES +P D E + + P+V+ ++E S V++E
Sbjct: 1323 ESLAYPSD---GGEGTGNMPKVQGLLENGDSVTSPEKVATE 1360
>ZFIN|ZDB-GENE-030131-6279 [details] [associations]
symbol:kdm4ab "lysine (K)-specific demethylase 4A,
genome duplicate b" species:7955 "Danio rerio" [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184
SMART:SM00249 SMART:SM00558 ZFIN:ZDB-GENE-030131-6279 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 eggNOG:COG5141
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
HOGENOM:HOG000231125 OrthoDB:EOG4QRH37 HOVERGEN:HBG080483
IPI:IPI00489014 EMBL:BC047193 UniGene:Dr.24248
ProteinModelPortal:Q802U7 STRING:Q802U7 ArrayExpress:Q802U7
Uniprot:Q802U7
Length = 895
Score = 197 (74.4 bits), Expect = 6.9e-13, Sum P(2) = 6.9e-13
Identities = 34/68 (50%), Positives = 49/68 (72%)
Query: 2 FLVEQVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDW 61
FL ++T +SPS+LK G+P + Q +GEF++TFP YH+GFN GFNCAE+ N A W
Sbjct: 234 FLRHKMTLISPSILKKYGIPFEKITQEAGEFMVTFPYGYHAGFNHGFNCAESTNFATRRW 293
Query: 62 LAHGQQAV 69
+ +G+QA+
Sbjct: 294 IDYGKQAI 301
Score = 60 (26.2 bits), Expect = 6.9e-13, Sum P(2) = 6.9e-13
Identities = 12/45 (26%), Positives = 21/45 (46%)
Query: 301 GTSGLSASHVSVNSHNEGNDETQVMNKKAKVKHEVCIDLNMDVIP 345
G +G + N NEG ++ + +H VC+D +V+P
Sbjct: 353 GEAGAQELRIE-NQSNEGQKKSLAKQRIGTKRHRVCLDFPEEVLP 396
>ZFIN|ZDB-GENE-070705-160 [details] [associations]
symbol:si:ch211-262l3.1 "si:ch211-262l3.1"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001965
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00249
SMART:SM00558 ZFIN:ZDB-GENE-070705-160 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 EMBL:BX640408 EMBL:CABZ01059930
EMBL:CABZ01059931 IPI:IPI00489014 Ensembl:ENSDART00000024302
OMA:VKEWNIC ArrayExpress:F1QNG0 Bgee:F1QNG0 Uniprot:F1QNG0
Length = 895
Score = 197 (74.4 bits), Expect = 6.9e-13, Sum P(2) = 6.9e-13
Identities = 34/68 (50%), Positives = 49/68 (72%)
Query: 2 FLVEQVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDW 61
FL ++T +SPS+LK G+P + Q +GEF++TFP YH+GFN GFNCAE+ N A W
Sbjct: 234 FLRHKMTLISPSILKKYGIPFEKITQEAGEFMVTFPYGYHAGFNHGFNCAESTNFATRRW 293
Query: 62 LAHGQQAV 69
+ +G+QA+
Sbjct: 294 IDYGKQAI 301
Score = 60 (26.2 bits), Expect = 6.9e-13, Sum P(2) = 6.9e-13
Identities = 12/45 (26%), Positives = 21/45 (46%)
Query: 301 GTSGLSASHVSVNSHNEGNDETQVMNKKAKVKHEVCIDLNMDVIP 345
G +G + N NEG ++ + +H VC+D +V+P
Sbjct: 353 GEAGAQELRIE-NQSNEGQKKSLAKQRIGTKRHRVCLDFPEEVLP 396
>UNIPROTKB|F1MYV2 [details] [associations]
symbol:KDM5C "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0032453 "histone demethylase activity (H3-K4 specific)"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 GO:GO:0032453 KO:K11446 CTD:8242
OMA:ISWQGRA EMBL:DAAA02073278 IPI:IPI00703369 RefSeq:NP_776610.2
UniGene:Bt.8145 PRIDE:F1MYV2 Ensembl:ENSBTAT00000019893
GeneID:281490 KEGG:bta:281490 NextBio:20805465 ArrayExpress:F1MYV2
Uniprot:F1MYV2
Length = 1555
Score = 222 (83.2 bits), Expect = 8.9e-13, Sum P(2) = 8.9e-13
Identities = 63/186 (33%), Positives = 90/186 (48%)
Query: 3 LVEQVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWL 62
L + VT ++P+ L + GVPV Q +GEFV+TFPRAYHSGFN G+N AEAVN DWL
Sbjct: 564 LHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADWL 623
Query: 63 AHGQQAVELYSEQHRKTSLSHDKLLFGSVQAAIKALWELSVLQKKTPGNRKWKDACGKDG 122
G+Q +E Y R SH++L+ K L+ K ++ +
Sbjct: 624 PAGRQCIEHYRRLRRYCVFSHEELICKMAACPEKLDLNLAAAVHKEMFIMVQEERRLRKA 683
Query: 123 VLTKAIKTRVQMKKEGLQKLPSYFK-LQKMEIDFDLKTERECFSCFYDL----HLSAAGC 177
+L K I + ++E + LP + K + L C+ C L H++ C
Sbjct: 684 LLEKGI---TEAEREAFELLPDDERQCIKCKTTCFLSA-LACYDCPDGLVCLSHINDL-C 738
Query: 178 KCSPDR 183
KCS R
Sbjct: 739 KCSSSR 744
Score = 39 (18.8 bits), Expect = 8.9e-13, Sum P(2) = 8.9e-13
Identities = 13/42 (30%), Positives = 22/42 (52%)
Query: 239 CSDTDGGLVKMDMES-EVFPMDCCEQKESSSSSPRV-ENIVE 278
C+ G VK +E E + + CE S SSP + ++++E
Sbjct: 865 CAMHQIGDVKGILEQVEAYQAEACEALASLPSSPGLLQSLLE 906
>ASPGD|ASPL0000010243 [details] [associations]
symbol:AN8211 species:162425 "Emericella nidulans"
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0031934 "mating-type
region heterochromatin" evidence=IEA] [GO:0048189 "Lid2 complex"
evidence=IEA] [GO:0031618 "nuclear centromeric heterochromatin"
evidence=IEA] [GO:0034647 "histone demethylase activity
(H3-trimethyl-K4 specific)" evidence=IEA] [GO:0000070 "mitotic
sister chromatid segregation" evidence=IEA] [GO:0030466 "chromatin
silencing at silent mating-type cassette" evidence=IEA] [GO:0034630
"RITS complex localization" evidence=IEA] [GO:0031507
"heterochromatin assembly" evidence=IEA] [GO:0051572 "negative
regulation of histone H3-K4 methylation" evidence=IEA] [GO:0051567
"histone H3-K9 methylation" evidence=IEA] [GO:0030702 "chromatin
silencing at centromere" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 EMBL:BN001302 GO:GO:0016706 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 eggNOG:NOG327026 OrthoDB:EOG44N21B KO:K11446
EMBL:AACD01000143 RefSeq:XP_681480.1 ProteinModelPortal:Q5AU19
EnsemblFungi:CADANIAT00004258 GeneID:2869040 KEGG:ani:AN8211.2
HOGENOM:HOG000160061 OMA:HFGATKT Uniprot:Q5AU19
Length = 1717
Score = 218 (81.8 bits), Expect = 9.2e-13, Sum P(2) = 9.2e-13
Identities = 49/107 (45%), Positives = 62/107 (57%)
Query: 3 LVEQVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWL 62
L + VT + P L+ GV VY + Q +G+FV+TFP+AYH+GFN GFN EAVN APVDW
Sbjct: 692 LFQLVTLMPPDQLRKAGVNVYALDQRAGQFVITFPQAYHAGFNHGFNFNEAVNFAPVDWE 751
Query: 63 AHGQQAVELYSEQHRKTSLSHDKLLFGSV--QAAIK-ALWELSVLQK 106
G VE R SHD+LLF + +I A W LQ+
Sbjct: 752 PFGAAGVERLQAFRRHPCFSHDELLFTAAARDTSISTAKWLAPALQR 798
Score = 44 (20.5 bits), Expect = 9.2e-13, Sum P(2) = 9.2e-13
Identities = 11/34 (32%), Positives = 18/34 (52%)
Query: 334 EVCIDL-NMDVIPDGNESKLLLSDSHGKEAIENL 366
+V DL N D P+ + + ++H EA+E L
Sbjct: 1646 DVFADLTNQDADPEPEQDPEPMENTHANEALELL 1679
>MGI|MGI:99780 [details] [associations]
symbol:Kdm5d "lysine (K)-specific demethylase 5D"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016702
"oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0016706 "oxidoreductase activity, acting
on paired donors, with incorporation or reduction of molecular
oxygen, 2-oxoglutarate as one donor, and incorporation of one atom
each of oxygen into both donors" evidence=IEA] [GO:0032453 "histone
demethylase activity (H3-K4 specific)" evidence=ISO] [GO:0034720
"histone H3-K4 demethylation" evidence=ISO] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
MGI:MGI:99780 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0016706 GO:GO:0016702 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 eggNOG:NOG327026 GeneTree:ENSGT00530000063118
GO:GO:0032453 KO:K11446 HOGENOM:HOG000290719 OrthoDB:EOG4894KP
CTD:8284 EMBL:AF127244 EMBL:AK140971 EMBL:BC059077 EMBL:Z29652
IPI:IPI00123375 IPI:IPI00848809 IPI:IPI00848997 IPI:IPI00850747
PIR:I48776 RefSeq:NP_035549.1 UniGene:Mm.262676
ProteinModelPortal:Q62240 SMR:Q62240 STRING:Q62240
PhosphoSite:Q62240 PRIDE:Q62240 Ensembl:ENSMUST00000055032
GeneID:20592 KEGG:mmu:20592 UCSC:uc009uyz.1 UCSC:uc009uzb.1
InParanoid:Q62240 NextBio:298905 Bgee:Q62240 Genevestigator:Q62240
GermOnline:ENSMUSG00000056673 Uniprot:Q62240
Length = 1548
Score = 222 (83.2 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 64/186 (34%), Positives = 92/186 (49%)
Query: 3 LVEQVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWL 62
L + VT ++P+ L + GVPV Q +GEFV+TFPRAYHSGFN G+N AEAVN DWL
Sbjct: 563 LHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADWL 622
Query: 63 AHGQQAVELYSEQHRKTSLSHDKLLFGSVQAAIKALWELSVLQKKTPGNRKWKDACGKDG 122
G+Q +E Y R SH++L+ K L+V K ++ +
Sbjct: 623 PVGRQCIEHYRRLRRYCVFSHEELICKMAAFPEKLDLNLAVAVHKEMFIMVQEERRLRKT 682
Query: 123 VLTKAIKTRVQMKKEGLQKLPSYFK-LQKMEIDFDLKTERECFSCFYDL----HLSAAGC 177
+L K I + ++E + LP + K + L C+ C L H++ C
Sbjct: 683 LLEKGI---TEAEREAFELLPDDERQCIKCKTTCFLSA-LACYDCPDSLVCLSHINDL-C 737
Query: 178 KCSPDR 183
KCS +R
Sbjct: 738 KCSRNR 743
Score = 38 (18.4 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 10/24 (41%), Positives = 16/24 (66%)
Query: 659 SGQNSVEEEAQLVLRGLFQKASPK 682
SG++ ++EE +LVL K+S K
Sbjct: 1335 SGKDILKEEEELVLNEERIKSSEK 1358
>UNIPROTKB|G4N2P7 [details] [associations]
symbol:MGG_04878 "Lid2 complex component lid2"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR001841
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00184
SMART:SM00249 SMART:SM00501 SMART:SM00558 GO:GO:0005634
EMBL:CM001233 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
KO:K11446 RefSeq:XP_003712359.1 EnsemblFungi:MGG_04878T0
GeneID:2675627 KEGG:mgr:MGG_04878 Uniprot:G4N2P7
Length = 1755
Score = 223 (83.6 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 67/199 (33%), Positives = 93/199 (46%)
Query: 3 LVEQVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWL 62
L + VT L P LK GV VY + Q +G+FV+TFP+AYH+GFN GFN EAVN AP DW
Sbjct: 698 LFQLVTLLPPEQLKKAGVRVYAIDQRAGQFVITFPQAYHAGFNHGFNFNEAVNFAPSDWE 757
Query: 63 AHGQQAVELYSEQHRKTSLSHDKLLFGSVQAAIKALWELSVLQKKTPGNRKW--KDACGK 120
G VE + R+ SHD+LL+ + + + + P + ++ +
Sbjct: 758 PFGLAGVERLQQFRRQPCFSHDELLWTAAEGIASGGLTIQTAKWLAPALERIHSRELAQR 817
Query: 121 DGVLTKAIKTRVQMKKEGLQKLPSYFKLQ-KMEIDFDLKTER-ECFSCFYDLHLSAAGCK 178
+TK K Q S L K+E D D+ E +C C +LS C
Sbjct: 818 QAFVTKH-KDLAQHSCAITGGEDSSCLLSFKVE-DEDVPEEEYQCGYCKVYTYLSRFKCL 875
Query: 179 CSPDRFACLKHANIFCSCE 197
S + CL HA C+
Sbjct: 876 KS-GQVLCLLHAGHHACCD 893
Score = 37 (18.1 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 10/47 (21%), Positives = 21/47 (44%)
Query: 391 QVRSDCNSSNSHKDPNKDQPSCSRVIEGTCSFDVKKLFGVDLSLPHQ 437
Q+ + +H P + P + T F ++KL G ++ L ++
Sbjct: 1417 QIIDNAQDFRNHIGPYCNNPMATASEVETQRFYLRKLEGAEILLAYE 1463
>UNIPROTKB|Q6B0I6 [details] [associations]
symbol:KDM4D "Lysine-specific demethylase 4D" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00558
GO:GO:0005634 GO:GO:0006355 EMBL:CH471065 GO:GO:0046872
GO:GO:0006351 GO:GO:0016568 GO:GO:0016702 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 PDB:4HON PDBsum:4HON eggNOG:NOG317950
OMA:FASKRWI HOGENOM:HOG000231125 KO:K06709 EMBL:AK001113
EMBL:AK056162 EMBL:AP002383 EMBL:BC074739 EMBL:BC119010
EMBL:BC122858 EMBL:AL137545 IPI:IPI00017991 PIR:T46388
RefSeq:NP_060509.2 UniGene:Hs.503598 PDB:3DXT PDB:3DXU PDB:4HOO
PDBsum:3DXT PDBsum:3DXU PDBsum:4HOO ProteinModelPortal:Q6B0I6
SMR:Q6B0I6 DIP:DIP-29606N IntAct:Q6B0I6 STRING:Q6B0I6
PhosphoSite:Q6B0I6 DMDM:239938885 PRIDE:Q6B0I6
Ensembl:ENST00000335080 Ensembl:ENST00000536741
Ensembl:ENST00000570915 Ensembl:ENST00000576429 GeneID:55693
KEGG:hsa:55693 UCSC:uc001pfe.3 CTD:55693 GeneCards:GC11P094706
HGNC:HGNC:25498 MIM:609766 neXtProt:NX_Q6B0I6 PharmGKB:PA164721552
InParanoid:Q6B0I6 OrthoDB:EOG4F7NJR PhylomeDB:Q6B0I6
ChEMBL:CHEMBL6138 EvolutionaryTrace:Q6B0I6 GenomeRNAi:55693
NextBio:60511 Bgee:Q6B0I6 CleanEx:HS_JMJD2D Genevestigator:Q6B0I6
GermOnline:ENSG00000186280 Uniprot:Q6B0I6
Length = 523
Score = 197 (74.4 bits), Expect = 3.4e-12, P = 3.4e-12
Identities = 36/78 (46%), Positives = 51/78 (65%)
Query: 2 FLVEQVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDW 61
FL +V +SP+VLK G+P + Q +GEF++TFP YH+GFN GFNCAEA+N A W
Sbjct: 241 FLRHKVALISPTVLKENGIPFNRITQEAGEFMVTFPYGYHAGFNHGFNCAEAINFATPRW 300
Query: 62 LAHGQQAVELYSEQHRKT 79
+ +G+ A + + R T
Sbjct: 301 IDYGKMASQCSCGEARVT 318
>POMBASE|SPAC1002.05c [details] [associations]
symbol:jmj2 "histone demethylase Jmj2" species:4896
"Schizosaccharomyces pombe" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0000790 "nuclear chromatin" evidence=ISM] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006338 "chromatin remodeling" evidence=IMP] [GO:0008270 "zinc
ion binding" evidence=ISM] [GO:0016577 "histone demethylation"
evidence=IDA] [GO:0032453 "histone demethylase activity (H3-K4
specific)" evidence=IDA] [GO:0034647 "histone demethylase activity
(H3-trimethyl-K4 specific)" evidence=IMP;IDA] [GO:0034648 "histone
demethylase activity (H3-dimethyl-K4 specific)" evidence=IDA]
[GO:0051864 "histone demethylase activity (H3-K36 specific)"
evidence=ISO] InterPro:IPR001606 InterPro:IPR003347
InterPro:IPR004198 Pfam:PF02373 Pfam:PF02928 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00501 SMART:SM00558 PomBase:SPAC1002.05c
EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0003677 GO:GO:0008270
GO:GO:0006338 GO:GO:0000122 GO:GO:0000790 GO:GO:0034648
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 GO:GO:0051864
eggNOG:NOG327026 GO:GO:0034647 OMA:RNISGMT OrthoDB:EOG44N21B
RefSeq:NP_593492.1 ProteinModelPortal:Q9US53
EnsemblFungi:SPAC1002.05c.1 GeneID:2543275 KEGG:spo:SPAC1002.05c
NextBio:20804296 Uniprot:Q9US53
Length = 715
Score = 184 (69.8 bits), Expect = 3.6e-12, Sum P(2) = 3.6e-12
Identities = 38/88 (43%), Positives = 52/88 (59%)
Query: 3 LVEQVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWL 62
L + T ++P L+ GV VY + Q EFV+TFP+++H+G N GFN EAVN AP DWL
Sbjct: 518 LYQLATMINPDELQKRGVDVYFIDQGPNEFVITFPKSFHAGINHGFNINEAVNFAPKDWL 577
Query: 63 AHG--QQAVELYSEQHRKTSLSHDKLLF 88
+G V Y + LSHD L++
Sbjct: 578 LNGFSLNGVLKYQSLLKPPVLSHDMLVY 605
Score = 64 (27.6 bits), Expect = 3.6e-12, Sum P(2) = 3.6e-12
Identities = 13/55 (23%), Positives = 23/55 (41%)
Query: 162 ECFSCFYDLHLSAAGCKCSPDRFACLKHANIFCSCEIDHRFVILRYSTDELNTLV 216
+C C + S C C C H C C++ ++ + L+ +EL L+
Sbjct: 660 QCQHCKAFSYFSQVACSCKSIT-VCPLHIEYLCKCDLSNKTLRLKVDDNELQKLL 713
>MGI|MGI:3606484 [details] [associations]
symbol:Kdm4d "lysine (K)-specific demethylase 4D"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0016702 "oxidoreductase activity,
acting on single donors with incorporation of molecular oxygen,
incorporation of two atoms of oxygen" evidence=IEA] [GO:0033169
"histone H3-K9 demethylation" evidence=IMP] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184
SMART:SM00558 MGI:MGI:3606484 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0006351 GO:GO:0016568 GO:GO:0016702
EMBL:CT485607 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
GeneTree:ENSGT00530000063342 eggNOG:NOG317950 OMA:FASKRWI
HOGENOM:HOG000231125 KO:K06709 CTD:55693 OrthoDB:EOG4F7NJR
EMBL:AK030020 EMBL:AK155227 EMBL:BC112372 IPI:IPI00651810
RefSeq:NP_775609.2 UniGene:Mm.240457 ProteinModelPortal:Q3U2K5
SMR:Q3U2K5 PhosphoSite:Q3U2K5 PRIDE:Q3U2K5 DNASU:244694
Ensembl:ENSMUST00000058796 Ensembl:ENSMUST00000115647 GeneID:244694
KEGG:mmu:244694 UCSC:uc009oen.1 InParanoid:A2CGB5 NextBio:386391
Bgee:Q3U2K5 CleanEx:MM_JMJD2D Genevestigator:Q3U2K5 Uniprot:Q3U2K5
Length = 510
Score = 195 (73.7 bits), Expect = 5.3e-12, P = 5.3e-12
Identities = 41/99 (41%), Positives = 59/99 (59%)
Query: 2 FLVEQVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDW 61
FL +V +SP+VLK G+P + Q +GEF++TFP YH+GFN GFNCAEA+N A W
Sbjct: 238 FLRHKVALISPTVLKENGIPFGRITQEAGEFMVTFPYGYHAGFNHGFNCAEAINFATPRW 297
Query: 62 LAHGQQAVELYSEQHRKTSLSHDKLLFGSVQAAIKALWE 100
+ +G+ A + + R S S D + +Q LW+
Sbjct: 298 IDYGKVASQCSCGEAR-VSFSMDAFV-RILQPERYELWK 334
>UNIPROTKB|F1SMN9 [details] [associations]
symbol:F1SMN9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001965 InterPro:IPR003347
Pfam:PF02373 PROSITE:PS51184 SMART:SM00249 SMART:SM00558
InterPro:IPR002999 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
SMART:SM00333 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 GeneTree:ENSGT00530000063342 OMA:DIIQGER
EMBL:AEMK01181236 EMBL:AEMK01189766 EMBL:CU137711 EMBL:CU481460
EMBL:CU571047 Ensembl:ENSSSCT00000005730 Uniprot:F1SMN9
Length = 1057
Score = 199 (75.1 bits), Expect = 6.3e-12, P = 6.3e-12
Identities = 42/108 (38%), Positives = 66/108 (61%)
Query: 2 FLVEQVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDW 61
FL ++T +SPSVLK G+P + Q +GEF++TFP YH+GFN GFNCAE+ N A V W
Sbjct: 239 FLRHKMTLISPSVLKKYGIPFDKITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATVRW 298
Query: 62 LAHGQQA-VELYSEQHRKTSLSHDKLLFGS-VQAAIKALWELSVLQKK 107
+ +G+ A + + ++ K +L +FG+ + LW +V ++
Sbjct: 299 IDYGKVAKLTMCFTEYVKLTLD----IFGAEILREAYQLWNSNVFLRR 342
>RGD|1591045 [details] [associations]
symbol:Kdm4d "lysine (K)-specific demethylase 4D" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016702
"oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0033169 "histone H3-K9 demethylation"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00558
RGD:1591045 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0006351
GO:GO:0016568 GO:GO:0016702 InterPro:IPR003349 PROSITE:PS51183
Pfam:PF02375 GeneTree:ENSGT00530000063342 eggNOG:NOG317950
HOGENOM:HOG000231125 KO:K06709 CTD:55693 OrthoDB:EOG4F7NJR
EMBL:BC128760 IPI:IPI00767164 RefSeq:NP_001073180.1
RefSeq:XP_003750480.1 RefSeq:XP_003750481.1 UniGene:Rn.202733
ProteinModelPortal:A1A5Q5 SMR:A1A5Q5 PRIDE:A1A5Q5
Ensembl:ENSRNOT00000033932 GeneID:100909834 GeneID:689582
KEGG:rno:100909834 KEGG:rno:689582 UCSC:RGD:1591045 NextBio:738978
Genevestigator:A1A5Q5 Uniprot:A1A5Q5
Length = 510
Score = 194 (73.4 bits), Expect = 6.9e-12, P = 6.9e-12
Identities = 38/83 (45%), Positives = 53/83 (63%)
Query: 2 FLVEQVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDW 61
FL +V +SP+VLK G+P + Q +GEF++TFP YH+GFN GFNCAEA+N A W
Sbjct: 238 FLRHKVALISPTVLKENGIPFGRITQEAGEFMVTFPYGYHAGFNHGFNCAEAINFATPRW 297
Query: 62 LAHGQQAVELYSEQHRKTSLSHD 84
+ +G+ A + + R S S D
Sbjct: 298 IDYGKVASQCSCGEAR-VSFSMD 319
>UNIPROTKB|F5GYH2 [details] [associations]
symbol:KDM4C "Lysine-specific demethylase 4C" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001965
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00249
SMART:SM00558 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AL354707 EMBL:AL137020
EMBL:AL161443 EMBL:AL445592 EMBL:AL513412 HGNC:HGNC:17071
ChiTaRS:KDM4C IPI:IPI01018984 ProteinModelPortal:F5GYH2 SMR:F5GYH2
Ensembl:ENST00000536108 ArrayExpress:F5GYH2 Bgee:F5GYH2
Uniprot:F5GYH2
Length = 629
Score = 195 (73.7 bits), Expect = 7.9e-12, P = 7.9e-12
Identities = 35/67 (52%), Positives = 48/67 (71%)
Query: 2 FLVEQVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDW 61
FL ++T +SPSVLK G+P + Q +GEF++TFP YH+GFN GFNCAE+ N A V W
Sbjct: 58 FLRHKMTLISPSVLKKYGIPFDKITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATVRW 117
Query: 62 LAHGQQA 68
+ +G+ A
Sbjct: 118 IDYGKVA 124
>UNIPROTKB|B2RXH2 [details] [associations]
symbol:KDM4E "Lysine-specific demethylase 4E" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00558
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0006351
GO:GO:0016568 GO:GO:0016702 InterPro:IPR003349 PROSITE:PS51183
Pfam:PF02375 eggNOG:NOG317950 HOGENOM:HOG000231125 EMBL:AP002383
EMBL:BC157851 EMBL:BC157889 EMBL:BC171916 IPI:IPI00887640
RefSeq:NP_001155102.1 UniGene:Hs.714692 PDB:2W2I PDBsum:2W2I
ProteinModelPortal:B2RXH2 SMR:B2RXH2 PRIDE:B2RXH2
Ensembl:ENST00000450979 Ensembl:ENST00000576054 GeneID:390245
KEGG:hsa:390245 UCSC:uc010ruf.1 CTD:390245 GeneCards:GC11P094759
HGNC:HGNC:37098 neXtProt:NX_B2RXH2 PharmGKB:PA165543440 OMA:PESYELW
OrthoDB:EOG45491F BindingDB:B2RXH2 ChEMBL:CHEMBL1293226
EvolutionaryTrace:B2RXH2 GenomeRNAi:390245 NextBio:103576
Uniprot:B2RXH2
Length = 506
Score = 192 (72.6 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 43/112 (38%), Positives = 64/112 (57%)
Query: 2 FLVEQVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDW 61
FL +V +SP+VLK G+P + Q +GEF++TFP YH+GFN GFNCAEA+N A W
Sbjct: 238 FLRHKVALISPTVLKENGIPFNCMTQEAGEFMVTFPYGYHAGFNHGFNCAEAINFATPRW 297
Query: 62 LAHGQQAVELYSEQHRKTSLSHDKLLFGSVQAAIKALW----ELSVLQKKTP 109
+ +G+ A + + T S D + VQ LW +L++++ P
Sbjct: 298 IDYGKMASQCSCGESTVT-FSMDPFV-RIVQPESYELWKHRQDLAIVEHTEP 347
>UNIPROTKB|E1BX38 [details] [associations]
symbol:Gga.52669 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001965
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00249
SMART:SM00558 InterPro:IPR002999 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 SMART:SM00333
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 OMA:QTEKEAP EMBL:AADN02062013
IPI:IPI00735114 Ensembl:ENSGALT00000006511 ArrayExpress:E1BX38
Uniprot:E1BX38
Length = 1095
Score = 196 (74.1 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 33/69 (47%), Positives = 49/69 (71%)
Query: 2 FLVEQVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDW 61
FL ++T +SPS+LK G+P + Q +GEF++TFP YH+GFN GFNCAE+ N A + W
Sbjct: 238 FLRHKMTLISPSILKKYGIPFDRITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATLRW 297
Query: 62 LAHGQQAVE 70
+ +G+ A +
Sbjct: 298 IDYGKMATQ 306
>RGD|1307528 [details] [associations]
symbol:Kdm4c "lysine (K)-specific demethylase 4C" species:10116
"Rattus norvegicus" [GO:0000790 "nuclear chromatin" evidence=ISO]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008284 "positive
regulation of cell proliferation" evidence=ISO] [GO:0019899 "enzyme
binding" evidence=ISO] [GO:0032454 "histone demethylase activity
(H3-K9 specific)" evidence=ISO] [GO:0033169 "histone H3-K9
demethylation" evidence=ISO] [GO:0050681 "androgen receptor
binding" evidence=ISO] InterPro:IPR001965 InterPro:IPR003347
Pfam:PF02373 PROSITE:PS51184 SMART:SM00249 SMART:SM00558
InterPro:IPR002999 RGD:1307528 GO:GO:0046872 GO:GO:0008284
GO:GO:0008270 GO:GO:0006357 GO:GO:0000790 SMART:SM00333
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 GO:GO:0032454 IPI:IPI00959259
Ensembl:ENSRNOT00000009083 UCSC:RGD:1307528 ArrayExpress:F1LS62
Uniprot:F1LS62
Length = 1053
Score = 195 (73.7 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 35/67 (52%), Positives = 48/67 (71%)
Query: 2 FLVEQVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDW 61
FL ++T +SPSVLK G+P + Q +GEF++TFP YH+GFN GFNCAE+ N A V W
Sbjct: 239 FLRHKMTLISPSVLKKYGIPFDKITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATVRW 298
Query: 62 LAHGQQA 68
+ +G+ A
Sbjct: 299 IDYGKVA 305
Score = 51 (23.0 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 18/81 (22%), Positives = 39/81 (48%)
Query: 616 KLLTFGKTTEVNKNSSSGLSCSEAETKSKIFGVALMDEDQNSPSGQNSVEEEAQLVLRGL 675
K ++ G+T ++ SC + S+IF + D+ S +++ E+ +V R
Sbjct: 874 KAISVGQTVITKHRNTRYYSCRVIDVTSQIFYEVMFDDGSFS---RDTFPED--IVSRNC 928
Query: 676 FQKASPKELKVMQRILYSEGR 696
+ P E +V+Q + + +G+
Sbjct: 929 VKLGPPAEGEVIQ-VKWPDGK 948
>CGD|CAL0000662 [details] [associations]
symbol:orf19.5651 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0034721 "histone H3-K4
demethylation, trimethyl-H3-K4-specific" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0034647 "histone
demethylase activity (H3-trimethyl-K4 specific)" evidence=IEA]
[GO:0034648 "histone demethylase activity (H3-dimethyl-K4
specific)" evidence=IEA] InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR019787 Pfam:PF00628 Pfam:PF02373 PROSITE:PS50016
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 CGD:CAL0000662
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR019786 PROSITE:PS01359
EMBL:AACQ01000129 EMBL:AACQ01000128 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 eggNOG:NOG327026 RefSeq:XP_713332.1
RefSeq:XP_713379.1 ProteinModelPortal:Q59UR9 STRING:Q59UR9
GeneID:3644970 GeneID:3645037 KEGG:cal:CaO19.13096
KEGG:cal:CaO19.5651 Uniprot:Q59UR9
Length = 723
Score = 192 (72.6 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 38/85 (44%), Positives = 54/85 (63%)
Query: 3 LVEQVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWL 62
L + VT +SPS L G+P + Q+S EFV+T+P YH+GFNCGFN EAVN A +WL
Sbjct: 419 LHQLVTLMSPSKLVEHGIPCVYADQNSNEFVITYPLVYHAGFNCGFNFNEAVNFAIDEWL 478
Query: 63 AHGQQAVELYSEQHRKTSLSHDKLL 87
G+++V Y ++ +H +LL
Sbjct: 479 EFGEKSVNDYRPIKKENVFNHYELL 503
>UNIPROTKB|E7EV17 [details] [associations]
symbol:KDM4C "Lysine-specific demethylase 4C" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001965
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00249
SMART:SM00558 InterPro:IPR002999 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 SMART:SM00333
EMBL:AL354707 EMBL:AL137020 EMBL:AL161443 EMBL:AL445592
EMBL:AL513412 HGNC:HGNC:17071 ChiTaRS:KDM4C IPI:IPI00910024
ProteinModelPortal:E7EV17 SMR:E7EV17 Ensembl:ENST00000442236
UCSC:uc011lmk.2 ArrayExpress:E7EV17 Bgee:E7EV17 Uniprot:E7EV17
Length = 801
Score = 195 (73.7 bits), Expect = 3.0e-11, Sum P(2) = 3.0e-11
Identities = 35/67 (52%), Positives = 48/67 (71%)
Query: 2 FLVEQVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDW 61
FL ++T +SPSVLK G+P + Q +GEF++TFP YH+GFN GFNCAE+ N A V W
Sbjct: 58 FLRHKMTLISPSVLKKYGIPFDKITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATVRW 117
Query: 62 LAHGQQA 68
+ +G+ A
Sbjct: 118 IDYGKVA 124
Score = 45 (20.9 bits), Expect = 3.0e-11, Sum P(2) = 3.0e-11
Identities = 17/81 (20%), Positives = 38/81 (46%)
Query: 616 KLLTFGKTTEVNKNSSSGLSCSEAETKSKIFGVALMDEDQNSPSGQNSVEEEAQLVLRGL 675
K+++ G+T ++ SC S+ F + D+ S +++ E+ +V R
Sbjct: 622 KVISVGQTVITKHRNTRYYSCRVMAVTSQTFYEVMFDDGSFS---RDTFPED--IVSRDC 676
Query: 676 FQKASPKELKVMQRILYSEGR 696
+ P E +V+Q + + +G+
Sbjct: 677 LKLGPPAEGEVVQ-VKWPDGK 696
Score = 38 (18.4 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 11/32 (34%), Positives = 13/32 (40%)
Query: 446 FLKTDTINGSNVRTSVTDQRFQKKLETCVEPI 477
F D I G R V RF K E +P+
Sbjct: 755 FYGADIIQGERKRQRVLSSRF--KNEYVADPV 784
>UNIPROTKB|E1C6D5 [details] [associations]
symbol:KDM4A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IEA] [GO:0035064 "methylated
histone residue binding" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0051864 "histone demethylase activity (H3-K36 specific)"
evidence=IEA] InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 InterPro:IPR002999
GO:GO:0005737 GO:GO:0005813 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 SMART:SM00333 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 GO:GO:0051864 OMA:KRTAGCC
EMBL:AADN02012723 EMBL:AADN02012724 IPI:IPI00586868
Ensembl:ENSGALT00000016376 Uniprot:E1C6D5
Length = 1017
Score = 202 (76.2 bits), Expect = 3.4e-11, Sum P(2) = 3.4e-11
Identities = 35/68 (51%), Positives = 51/68 (75%)
Query: 2 FLVEQVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDW 61
FL ++T +SPS+LK G+P V Q +GEF++TFP +YH+GFN GFNCAE+ N A + W
Sbjct: 237 FLRHKMTLISPSILKKYGIPFDKVTQEAGEFMITFPYSYHAGFNHGFNCAESTNFATLRW 296
Query: 62 LAHGQQAV 69
+ +G+Q+V
Sbjct: 297 IEYGKQSV 304
Score = 40 (19.1 bits), Expect = 3.4e-11, Sum P(2) = 3.4e-11
Identities = 11/37 (29%), Positives = 18/37 (48%)
Query: 376 EKVLCSGTVKEQDTMQVRSDCNSS--NSHKDPNKDQP 410
+K +G+V EQ+ +V + S S K + QP
Sbjct: 560 KKASATGSVNEQELAEVTKEYIQSMKESKKSKGRRQP 596
>MGI|MGI:1924054 [details] [associations]
symbol:Kdm4c "lysine (K)-specific demethylase 4C"
species:10090 "Mus musculus" [GO:0000790 "nuclear chromatin"
evidence=ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=ISO] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0019899 "enzyme binding"
evidence=ISO;IPI] [GO:0032454 "histone demethylase activity (H3-K9
specific)" evidence=ISO] [GO:0033169 "histone H3-K9 demethylation"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0050681 "androgen receptor binding" evidence=ISO;IPI]
[GO:0055114 "oxidation-reduction process" evidence=IEA]
InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373 PROSITE:PS50016
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 InterPro:IPR002999
MGI:MGI:1924054 GO:GO:0046872 GO:GO:0008284 GO:GO:0008270
GO:GO:0006357 GO:GO:0006351 GO:GO:0000790 GO:GO:0016702
Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5141 PROSITE:PS01359
SMART:SM00333 PROSITE:PS50304 InterPro:IPR003349 PROSITE:PS51183
Pfam:PF02375 SMART:SM00545 GeneTree:ENSGT00530000063342
GO:GO:0032454 HOGENOM:HOG000231125 KO:K06709 OrthoDB:EOG4N5VW5
CTD:23081 OMA:DIIQGER EMBL:AK173023 EMBL:AK053104 EMBL:AK081769
EMBL:AK144103 EMBL:BC020180 EMBL:BC042424 IPI:IPI00470006
RefSeq:NP_001165566.1 RefSeq:NP_659036.1 UniGene:Mm.209059
ProteinModelPortal:Q8VCD7 SMR:Q8VCD7 STRING:Q8VCD7
PhosphoSite:Q8VCD7 PRIDE:Q8VCD7 Ensembl:ENSMUST00000030102
Ensembl:ENSMUST00000077851 GeneID:76804 KEGG:mmu:76804
UCSC:uc008tjj.2 InParanoid:Q8VCD7 NextBio:345851 Bgee:Q8VCD7
CleanEx:MM_JMJD2C Genevestigator:Q8VCD7
GermOnline:ENSMUSG00000028397 Uniprot:Q8VCD7
Length = 1054
Score = 195 (73.7 bits), Expect = 5.0e-11, Sum P(2) = 5.0e-11
Identities = 35/67 (52%), Positives = 48/67 (71%)
Query: 2 FLVEQVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDW 61
FL ++T +SPSVLK G+P + Q +GEF++TFP YH+GFN GFNCAE+ N A V W
Sbjct: 239 FLRHKMTLISPSVLKKYGIPFDKITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATVRW 298
Query: 62 LAHGQQA 68
+ +G+ A
Sbjct: 299 IDYGKVA 305
Score = 46 (21.3 bits), Expect = 5.0e-11, Sum P(2) = 5.0e-11
Identities = 17/81 (20%), Positives = 38/81 (46%)
Query: 616 KLLTFGKTTEVNKNSSSGLSCSEAETKSKIFGVALMDEDQNSPSGQNSVEEEAQLVLRGL 675
K ++ G+T ++ SC + S+ F + D+ S +++ E+ +V R
Sbjct: 875 KAISVGQTVITKHRNTRYYSCRVIDVTSQTFYEVMFDDGSFS---RDTFPED--IVSRNC 929
Query: 676 FQKASPKELKVMQRILYSEGR 696
+ P E +V+Q + + +G+
Sbjct: 930 VKLGPPAEGEVIQ-VKWPDGK 949
>UNIPROTKB|Q9H3R0 [details] [associations]
symbol:KDM4C "Lysine-specific demethylase 4C" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0032454 "histone demethylase activity
(H3-K9 specific)" evidence=IMP;IDA] [GO:0033169 "histone H3-K9
demethylation" evidence=IMP;IDA] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IMP] [GO:0050681 "androgen receptor binding" evidence=IPI]
[GO:0019899 "enzyme binding" evidence=IPI] [GO:0000790 "nuclear
chromatin" evidence=IDA] InterPro:IPR001965 InterPro:IPR003347
Pfam:PF02373 PROSITE:PS50016 PROSITE:PS51184 SMART:SM00249
SMART:SM00558 InterPro:IPR002999 GO:GO:0046872 GO:GO:0008284
GO:GO:0008270 GO:GO:0006357 GO:GO:0006351 GO:GO:0000790
GO:GO:0016702 eggNOG:COG5141 PROSITE:PS01359 SMART:SM00333
PROSITE:PS50304 Pathway_Interaction_DB:ar_pathway
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GO:GO:0032454 HOGENOM:HOG000231125 KO:K06709 OrthoDB:EOG4N5VW5
EMBL:AB037901 EMBL:AB018323 EMBL:AK304032 EMBL:AL354707
EMBL:AL137020 EMBL:AL161443 EMBL:AL445592 EMBL:AL513412
EMBL:BC104859 EMBL:BC104861 EMBL:BC143571 IPI:IPI00027642
IPI:IPI00645825 IPI:IPI00878778 RefSeq:NP_001140166.1
RefSeq:NP_001140167.1 RefSeq:NP_001140168.1 RefSeq:NP_055876.2
UniGene:Hs.709425 PDB:2XDP PDB:2XML PDBsum:2XDP PDBsum:2XML
ProteinModelPortal:Q9H3R0 SMR:Q9H3R0 IntAct:Q9H3R0 STRING:Q9H3R0
PhosphoSite:Q9H3R0 DMDM:97536525 PaxDb:Q9H3R0 PRIDE:Q9H3R0
Ensembl:ENST00000381306 Ensembl:ENST00000381309
Ensembl:ENST00000420847 Ensembl:ENST00000543771 GeneID:23081
KEGG:hsa:23081 UCSC:uc003zkg.3 UCSC:uc003zkh.3 CTD:23081
GeneCards:GC09P006720 H-InvDB:HIX0017555 HGNC:HGNC:17071 MIM:605469
neXtProt:NX_Q9H3R0 PharmGKB:PA164721503 InParanoid:Q9H3R0
OMA:DIIQGER PhylomeDB:Q9H3R0 BindingDB:Q9H3R0 ChEMBL:CHEMBL6175
ChiTaRS:KDM4C EvolutionaryTrace:Q9H3R0 GenomeRNAi:23081
NextBio:44205 ArrayExpress:Q9H3R0 Bgee:Q9H3R0 CleanEx:HS_JMJD2C
Genevestigator:Q9H3R0 GermOnline:ENSG00000107077 Uniprot:Q9H3R0
Length = 1056
Score = 195 (73.7 bits), Expect = 6.4e-11, Sum P(2) = 6.4e-11
Identities = 35/67 (52%), Positives = 48/67 (71%)
Query: 2 FLVEQVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDW 61
FL ++T +SPSVLK G+P + Q +GEF++TFP YH+GFN GFNCAE+ N A V W
Sbjct: 239 FLRHKMTLISPSVLKKYGIPFDKITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATVRW 298
Query: 62 LAHGQQA 68
+ +G+ A
Sbjct: 299 IDYGKVA 305
Score = 45 (20.9 bits), Expect = 6.4e-11, Sum P(2) = 6.4e-11
Identities = 17/81 (20%), Positives = 38/81 (46%)
Query: 616 KLLTFGKTTEVNKNSSSGLSCSEAETKSKIFGVALMDEDQNSPSGQNSVEEEAQLVLRGL 675
K+++ G+T ++ SC S+ F + D+ S +++ E+ +V R
Sbjct: 877 KVISVGQTVITKHRNTRYYSCRVMAVTSQTFYEVMFDDGSFS---RDTFPED--IVSRDC 931
Query: 676 FQKASPKELKVMQRILYSEGR 696
+ P E +V+Q + + +G+
Sbjct: 932 LKLGPPAEGEVVQ-VKWPDGK 951
Score = 38 (18.4 bits), Expect = 3.4e-10, Sum P(2) = 3.4e-10
Identities = 11/32 (34%), Positives = 13/32 (40%)
Query: 446 FLKTDTINGSNVRTSVTDQRFQKKLETCVEPI 477
F D I G R V RF K E +P+
Sbjct: 1010 FYGADIIQGERKRQRVLSSRF--KNEYVADPV 1039
>UNIPROTKB|O94953 [details] [associations]
symbol:KDM4B "Lysine-specific demethylase 4B" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373 PROSITE:PS50016
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 InterPro:IPR002999
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0008270
GO:GO:0006351 GO:GO:0016568 EMBL:CH471139 GO:GO:0016702
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 eggNOG:COG5141 PROSITE:PS01359 SMART:SM00333
PROSITE:PS50304 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 KO:K06709 CTD:23030 EMBL:AB020683 EMBL:AC005595
EMBL:AC022517 EMBL:BC063889 EMBL:BC136611 EMBL:AL133622
IPI:IPI00013205 IPI:IPI00440491 PIR:T43460 RefSeq:NP_055830.1
UniGene:Hs.654816 ProteinModelPortal:O94953 SMR:O94953
DIP:DIP-47283N IntAct:O94953 MINT:MINT-1427202 STRING:O94953
PhosphoSite:O94953 PaxDb:O94953 PRIDE:O94953
Ensembl:ENST00000159111 Ensembl:ENST00000381759 GeneID:23030
KEGG:hsa:23030 UCSC:uc002mbq.4 UCSC:uc010xil.1
GeneCards:GC19P004969 HGNC:HGNC:29136 MIM:609765 neXtProt:NX_O94953
PharmGKB:PA164721452 InParanoid:O94953 OrthoDB:EOG4N5VW5
PhylomeDB:O94953 ChiTaRS:KDM4B GenomeRNAi:23030 NextBio:44006
ArrayExpress:O94953 Bgee:O94953 CleanEx:HS_JMJD2B
Genevestigator:O94953 Uniprot:O94953
Length = 1096
Score = 189 (71.6 bits), Expect = 8.0e-11, P = 8.0e-11
Identities = 32/69 (46%), Positives = 48/69 (69%)
Query: 2 FLVEQVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDW 61
FL ++T +SP +LK G+P + Q +GEF++TFP YH+GFN GFNCAE+ N A + W
Sbjct: 238 FLRHKMTLISPIILKKYGIPFSRITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATLRW 297
Query: 62 LAHGQQAVE 70
+ +G+ A +
Sbjct: 298 IDYGKVATQ 306
>UNIPROTKB|F5GX28 [details] [associations]
symbol:KDM4B "Lysine-specific demethylase 4B" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001965
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00249
SMART:SM00558 InterPro:IPR002999 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 SMART:SM00333 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 EMBL:AC005595
EMBL:AC022517 HGNC:HGNC:29136 ChiTaRS:KDM4B EMBL:AC053467
EMBL:AC093033 EMBL:AC104520 IPI:IPI00922876
ProteinModelPortal:F5GX28 SMR:F5GX28 Ensembl:ENST00000536461
UCSC:uc010xim.2 OMA:QTEKEAP ArrayExpress:F5GX28 Bgee:F5GX28
Uniprot:F5GX28
Length = 1130
Score = 189 (71.6 bits), Expect = 8.3e-11, P = 8.3e-11
Identities = 32/69 (46%), Positives = 48/69 (69%)
Query: 2 FLVEQVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDW 61
FL ++T +SP +LK G+P + Q +GEF++TFP YH+GFN GFNCAE+ N A + W
Sbjct: 238 FLRHKMTLISPIILKKYGIPFSRITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATLRW 297
Query: 62 LAHGQQAVE 70
+ +G+ A +
Sbjct: 298 IDYGKVATQ 306
>UNIPROTKB|E2R243 [details] [associations]
symbol:KDM4B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR007527 Pfam:PF02373 PROSITE:PS50966
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 InterPro:IPR002999
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 SMART:SM00333
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 OMA:QTEKEAP EMBL:AAEX03012537
EMBL:AAEX03012538 EMBL:AAEX03012539 Ensembl:ENSCAFT00000030040
Uniprot:E2R243
Length = 1133
Score = 189 (71.6 bits), Expect = 8.3e-11, P = 8.3e-11
Identities = 32/69 (46%), Positives = 48/69 (69%)
Query: 2 FLVEQVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDW 61
FL ++T +SP +LK G+P + Q +GEF++TFP YH+GFN GFNCAE+ N A + W
Sbjct: 238 FLRHKMTLISPIILKKYGIPFSRITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATLRW 297
Query: 62 LAHGQQAVE 70
+ +G+ A +
Sbjct: 298 IDYGKVATQ 306
>FB|FBgn0053182 [details] [associations]
symbol:Kdm4B "Histone demethylase 4B" species:7227
"Drosophila melanogaster" [GO:0016577 "histone demethylation"
evidence=ISS] [GO:0051864 "histone demethylase activity (H3-K36
specific)" evidence=ISS;IDA;IMP] [GO:0005634 "nucleus"
evidence=ISS] [GO:0070544 "histone H3-K36 demethylation"
evidence=IMP] [GO:0033169 "histone H3-K9 demethylation"
evidence=IDA;IMP] [GO:0032454 "histone demethylase activity (H3-K9
specific)" evidence=IDA;IMP] InterPro:IPR003347 Pfam:PF02373
PROSITE:PS51184 SMART:SM00558 EMBL:AE013599 GO:GO:0005634
GO:GO:0045892 GO:GO:0046872 GO:GO:0006351 GO:GO:0016702
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 GO:GO:0051864 eggNOG:NOG317950
GO:GO:0032454 KO:K06709 RefSeq:NP_001163137.1 RefSeq:NP_001163138.1
RefSeq:NP_001163139.1 RefSeq:NP_788344.2 UniGene:Dm.6975
ProteinModelPortal:Q9V6L0 SMR:Q9V6L0 PaxDb:Q9V6L0
EnsemblMetazoa:FBtr0087770 EnsemblMetazoa:FBtr0302052
EnsemblMetazoa:FBtr0302053 EnsemblMetazoa:FBtr0302054 GeneID:318918
KEGG:dme:Dmel_CG33182 UCSC:CG33182-RA CTD:23030 FlyBase:FBgn0053182
InParanoid:Q9V6L0 OMA:MERWIEY OrthoDB:EOG4NVX19 PhylomeDB:Q9V6L0
GenomeRNAi:318918 NextBio:846567 GermOnline:CG33182 Uniprot:Q9V6L0
Length = 590
Score = 185 (70.2 bits), Expect = 8.7e-11, P = 8.7e-11
Identities = 32/69 (46%), Positives = 48/69 (69%)
Query: 2 FLVEQVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDW 61
+L ++T +SP +LK VPV + Q +GE ++TFP YH+GFN GFNCAE+ N A W
Sbjct: 235 YLRHKMTLISPQILKQHDVPVSKITQEAGEIMITFPFGYHAGFNHGFNCAESTNFAMERW 294
Query: 62 LAHGQQAVE 70
+ +G++AV+
Sbjct: 295 IEYGKRAVQ 303
>ZFIN|ZDB-GENE-070209-38 [details] [associations]
symbol:zgc:153957 "zgc:153957" species:7955 "Danio
rerio" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 InterPro:IPR002999
ZFIN:ZDB-GENE-070209-38 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 SMART:SM00333
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 EMBL:CU468286 IPI:IPI00493629
Ensembl:ENSDART00000087729 ArrayExpress:F1QPD2 Bgee:F1QPD2
Uniprot:F1QPD2
Length = 1482
Score = 190 (71.9 bits), Expect = 9.5e-11, Sum P(2) = 9.5e-11
Identities = 33/69 (47%), Positives = 48/69 (69%)
Query: 2 FLVEQVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDW 61
FL ++T +SPSVLK +P + Q +GEF++TFP YH+GFN GFNCAE+ N A + W
Sbjct: 239 FLRHKMTLISPSVLKKYSIPFDKITQEAGEFMITFPYGYHAGFNHGFNCAESTNFASIRW 298
Query: 62 LAHGQQAVE 70
+ +G+ A +
Sbjct: 299 IDYGKLATQ 307
Score = 52 (23.4 bits), Expect = 9.5e-11, Sum P(2) = 9.5e-11
Identities = 21/108 (19%), Positives = 47/108 (43%)
Query: 290 SSEVVQSEPQRGTSGLSASHVSVNSHNEGNDETQVMNKKAKVKHEVC--IDLNMDVIPDG 347
++ QSEP+ + V++ S + Q +N ++ V + I + +
Sbjct: 499 TNSTAQSEPESTSESDIIVDVTLGSERTAENPNQTLNCES-VSETIAPSIPVTHSLTLHS 557
Query: 348 NESKLLLSDSHGKEA-IENLKAHLSACYQEKVLC--SGTVKEQDTMQV 392
+ +L S+S ++A IE + + ++ + C S KEQ ++ +
Sbjct: 558 TGATVLFSESDSQQAKIETEETVIDTLTEDSIDCGTSALYKEQSSISL 605
Score = 44 (20.5 bits), Expect = 6.4e-10, Sum P(2) = 6.4e-10
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 239 CSDTD-GGLVKMDMESE---VFPMDCCEQKESSSS 269
CSDT+ +D++ E V P + CE E + S
Sbjct: 892 CSDTEVSENAPLDLKQENEEVEPAESCELNEQAGS 926
>ZFIN|ZDB-GENE-120215-3 [details] [associations]
symbol:si:ch211-215f22.3 "si:ch211-215f22.3"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001965
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00249
SMART:SM00558 InterPro:IPR002999 ZFIN:ZDB-GENE-120215-3
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 SMART:SM00333
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 EMBL:BX119315 RefSeq:XP_001921829.2
Ensembl:ENSDART00000151359 GeneID:100003413 KEGG:dre:100003413
Bgee:I3ITH4 Uniprot:I3ITH4
Length = 2012
Score = 186 (70.5 bits), Expect = 9.9e-11, Sum P(3) = 9.9e-11
Identities = 39/99 (39%), Positives = 58/99 (58%)
Query: 2 FLVEQVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDW 61
FL ++T +SPS+L+ G+P V Q +G+F++TFP YH+GFN GFNCAE+ N A W
Sbjct: 240 FLRHKMTLISPSILRKYGIPFEKVTQEAGQFIVTFPYGYHAGFNHGFNCAESTNFATQRW 299
Query: 62 LAHGQQAVELYSEQHRKTSLSHDKLLFGSVQAAIKALWE 100
+ +G+ A L S + +S D + Q LW+
Sbjct: 300 IDYGKLAT-LCSCRKDMVKISMDVFVH-KFQPERYKLWK 336
Score = 61 (26.5 bits), Expect = 9.9e-11, Sum P(3) = 9.9e-11
Identities = 46/215 (21%), Positives = 92/215 (42%)
Query: 240 SDTDGGLVKMDMESEVFPMDCCEQKESSSSSPRVENIVEGNGPCCSRSHVSSEVVQSEPQ 299
++TD G + D ++E F + ++ES + + E VE + S S ++ S P+
Sbjct: 388 ANTDDG--EED-KAEAFS-EKVVKRESDAGKEKAEAEVEKSVRDEEPSSTSEQISSSSPK 443
Query: 300 RGTSGLSASHVSVNSHNEGNDETQVMNKKAKVKHEVCIDLNMDVIPDGNESKLLLSDSHG 359
+ T + ++ NE D+ QV + +V+ + L + D NE + + ++
Sbjct: 444 QNTG---QKRLRSSTDNEAKDDNQVKIEVEEVEKKKA-KLGQNET-DNNEEQSVSAEPDD 498
Query: 360 KEAIENLKAHL-----SACYQEKVLCSGTVKEQD-TMQVRSDCNS--SNSHKDPNK-DQP 410
++A E ++ C + ++ S D T Q R + +S ++S + N D+
Sbjct: 499 EKAEETMETDTPPPQQQECMEAELSTSDPTSSSDITTQQREEESSDVTSSTQSINSVDED 558
Query: 411 SCSRVIEGTCSFDVKKLFGVDLSLPHQQSKLPLVD 445
+ S DV + F V ++ P + L D
Sbjct: 559 VALGGDVASQSEDVTQSFVVQIN-PEDITPTDLTD 592
Score = 55 (24.4 bits), Expect = 4.0e-10, Sum P(3) = 4.0e-10
Identities = 50/226 (22%), Positives = 92/226 (40%)
Query: 205 LRYSTDELNTLVEALEGGLDALKELASKNFKWADCSDTDGGLVKMDMESEVFPMDCCEQK 264
LR STD N + + ++ ++E+ K K ++TD + + +E E
Sbjct: 451 LRSSTD--NEAKDDNQVKIE-VEEVEKKKAKLGQ-NETDNN-EEQSVSAEPDDEKAEETM 505
Query: 265 ESSSSSPRVENIVEGNGPCCSRSHVSSEVVQSEPQRGTSGLSASHVSVNSHNE----GND 320
E+ + P+ + +E S SS++ + + +S +++S S+NS +E G D
Sbjct: 506 ETDTPPPQQQECMEAE-LSTSDPTSSSDITTQQREEESSDVTSSTQSINSVDEDVALGGD 564
Query: 321 ETQVMNKKAKVKHEVCIDLNM-DVIP----DGNESKLLL----SD----SHGKEAIENLK 367
V ++ V + +N D+ P D S + SD S + N
Sbjct: 565 ---VASQSEDVTQSFVVQINPEDITPTDLTDAQPSNITSHPCSSDIPATSFMSVSSSNFS 621
Query: 368 AH-LSACYQEKVLCSGTVKEQDTMQVRSDCNSSN-SHKDPNKDQPS 411
H +S Y C GT + D++ + S N +H + +PS
Sbjct: 622 KHSISFAYT----CDGTTEPSDSINLTPRVPSINVAHISDVQPEPS 663
Score = 46 (21.3 bits), Expect = 9.9e-11, Sum P(3) = 9.9e-11
Identities = 20/83 (24%), Positives = 49/83 (59%)
Query: 592 LSSPIIQAIEALDPNHLCMEYWNHKLLTFGKTTEVN--KNSSSGLSCSEAETKSKIFGVA 649
++S I +++ +P+++ + + K T +T+++ ++ S +S S ++ K +I A
Sbjct: 986 INSAQIDNVQS-EPSNISI---SSKQETSINSTQIDDVQSEPSDISIS-SKNKLRI-NSA 1039
Query: 650 LMDEDQNSPSGQN-SVEEEAQLV 671
+D+ Q++PSG + S E+E ++
Sbjct: 1040 QIDDVQSAPSGISVSSEQETSII 1062
Score = 45 (20.9 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 48/236 (20%), Positives = 97/236 (41%)
Query: 250 DMESEVFPMDCCEQKESSSSSPRVENIVE--GNGPCCSRSHVS---SEV--VQSEPQRGT 302
+++SE + ++ESS +S +++N+ N S+ S +++ VQSEP
Sbjct: 968 NVQSEPSDISIGSKQESSINSAQIDNVQSEPSNISISSKQETSINSTQIDDVQSEPS-DI 1026
Query: 303 SGLSASHVSVNSHNEGNDETQVMNKKAKVKHEVCI-DLNMDVIPDGNESKLLLSDSHGKE 361
S S + + +NS + ++ + E I +D + S + +S H +
Sbjct: 1027 SISSKNKLRINSAQIDDVQSAPSGISVSSEQETSIISAQVDDV-QSEYSDISISSKH-EP 1084
Query: 362 AIENLKAHLSACYQEKVLCSGTVKEQDTMQVRSDCNSSNSHKDPNKDQPSCSRVIEGTCS 421
+I + + E + S K++ + NS+ + D + S S
Sbjct: 1085 SINSTQT--DDIQSEPIDISFGSKQESCI------NSAQMY-DVQSEPSDISISSTQETS 1135
Query: 422 FDVKKLFGVDLSLPHQQSKLPLVDFLKTDTINGS---NVRTSVTDQRFQKKLETCV 474
+ +++ V L P S + F +IN S +V++ +D F + ETC+
Sbjct: 1136 INSAQMYDVQLE-PSDIS----ISFKDKPSINSSQVDDVQSEPSDICFGSEQETCI 1186
Score = 43 (20.2 bits), Expect = 6.4e-09, Sum P(3) = 6.4e-09
Identities = 27/128 (21%), Positives = 52/128 (40%)
Query: 282 PCCSRSHVSSEVVQSEPQRGTSGLSASHVSVNSHNEGNDETQVMNKKAKVKHEVCIDLNM 341
P + +H S VQ EP S ++ H+ + +E ND ++N K ++ ++
Sbjct: 768 PGVNFAHTSD--VQPEPSECESCTNSDHIC-DVQSEANDI--IINSKDEMSINSAHTFDV 822
Query: 342 DVIPDGNESKLL----LSDSHGKEAIENLKAHLSACYQEKVLCSGTVKEQDTMQVRSDCN 397
P N L +S + G + + + ++ + + T V+S+ N
Sbjct: 823 QPEPSDNTVSLTHKPDISSTSGSD-VPSGPGDIT----DSLGYDPDFNSTHTGHVQSESN 877
Query: 398 SSNSHKDP 405
+S HK P
Sbjct: 878 NSPKHKLP 885
>UNIPROTKB|F1N9S1 [details] [associations]
symbol:F1N9S1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0000790 "nuclear chromatin" evidence=IEA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0019899 "enzyme binding"
evidence=IEA] [GO:0032454 "histone demethylase activity (H3-K9
specific)" evidence=IEA] [GO:0050681 "androgen receptor binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 InterPro:IPR002999
GO:GO:0046872 GO:GO:0008284 GO:GO:0008270 GO:GO:0006357
GO:GO:0000790 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 SMART:SM00333
GeneTree:ENSGT00530000063342 GO:GO:0032454 OMA:DIIQGER
EMBL:AADN02066264 EMBL:AADN02066265 EMBL:AADN02066266
EMBL:AADN02066267 EMBL:AADN02066268 EMBL:AADN02066269
EMBL:AADN02066270 EMBL:AADN02066271 EMBL:AADN02066272
EMBL:AADN02066273 EMBL:AADN02066274 EMBL:AADN02066275
EMBL:AADN02066276 EMBL:AADN02066277 EMBL:AADN02066278
EMBL:AADN02066279 EMBL:AADN02066280 EMBL:AADN02066281
EMBL:AADN02066282 EMBL:AADN02066283 IPI:IPI00679881
Ensembl:ENSGALT00000032836 Uniprot:F1N9S1
Length = 998
Score = 195 (73.7 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 34/67 (50%), Positives = 48/67 (71%)
Query: 2 FLVEQVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDW 61
FL ++T +SPS+LK G+P V Q +GEF++TFP YH+GFN GFNCAE+ N A + W
Sbjct: 183 FLRHKMTLISPSILKKYGIPFDKVTQEAGEFMITFPYGYHAGFNHGFNCAESTNFATIRW 242
Query: 62 LAHGQQA 68
+ +G+ A
Sbjct: 243 IDYGKAA 249
Score = 40 (19.1 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 13/40 (32%), Positives = 19/40 (47%)
Query: 635 SCS-EAETKSKIFGVALMDEDQNSPSGQNSVEEEAQLVLR 673
SC EAE+ +K V+ D+ + SG E +V R
Sbjct: 450 SCKKEAESPAKKVNVSTEDDVSDLESGNRVGHGEVPVVKR 489
>TAIR|locus:2146653 [details] [associations]
symbol:ELF6 "EARLY FLOWERING 6" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA;TAS] [GO:0048577 "negative regulation
of short-day photoperiodism, flowering" evidence=IMP] [GO:0048579
"negative regulation of long-day photoperiodism, flowering"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009741 "response to brassinosteroid stimulus" evidence=IMP]
[GO:0009826 "unidimensional cell growth" evidence=IMP] [GO:0033169
"histone H3-K9 demethylation" evidence=IMP] [GO:0009630
"gravitropism" evidence=RCA] [GO:0019344 "cysteine biosynthetic
process" evidence=RCA] [GO:0043687 "post-translational protein
modification" evidence=RCA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=RCA] InterPro:IPR003347
InterPro:IPR007087 InterPro:IPR013087 InterPro:IPR015880
Pfam:PF02373 PROSITE:PS00028 PROSITE:PS50157 PROSITE:PS51184
SMART:SM00355 SMART:SM00558 GO:GO:0005634 EMBL:CP002688
GO:GO:0046872 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
GO:GO:0003676 GO:GO:0009826 GO:GO:0016702 eggNOG:COG5048
Gene3D:3.30.160.60 GO:GO:0048577 GO:GO:0033169 GO:GO:0009741
EMBL:AL391716 GO:GO:0048579 InterPro:IPR003349 PROSITE:PS51183
EMBL:AY664500 EMBL:AK222064 IPI:IPI00540726 RefSeq:NP_196044.2
UniGene:At.10092 UniGene:At.72547 HSSP:P08151
ProteinModelPortal:Q6BDA0 SMR:Q6BDA0 DIP:DIP-46102N IntAct:Q6BDA0
PRIDE:Q6BDA0 EnsemblPlants:AT5G04240.1 GeneID:830303
KEGG:ath:AT5G04240 TAIR:At5g04240 HOGENOM:HOG000239739
InParanoid:Q6BDA0 OMA:CGEAANF PhylomeDB:Q6BDA0
ProtClustDB:CLSN2681632 ArrayExpress:Q6BDA0 Genevestigator:Q6BDA0
Pfam:PF02375 SMART:SM00545 Uniprot:Q6BDA0
Length = 1340
Score = 191 (72.3 bits), Expect = 3.1e-10, Sum P(2) = 3.1e-10
Identities = 37/86 (43%), Positives = 53/86 (61%)
Query: 3 LVEQVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWL 62
L E+ T +SP ++ A G+P +VQ+ GEFV+TFPR+YH GF+ GFNC EA N WL
Sbjct: 358 LGEKTTLVSPEMIVASGIPCCRLVQNPGEFVVTFPRSYHVGFSHGFNCGEAANFGTPQWL 417
Query: 63 AHGQQAVELYSEQHRKTSLSHDKLLF 88
++A + + LSH +LL+
Sbjct: 418 NVAKEAAVRRAAMNYLPMLSHQQLLY 443
Score = 45 (20.9 bits), Expect = 3.1e-10, Sum P(2) = 3.1e-10
Identities = 18/69 (26%), Positives = 31/69 (44%)
Query: 297 EPQRGTSGLSASHVSVNSHNEGNDETQVMNKKAKVKHEVCIDLNMDVIPDGNESKLLLSD 356
EP + LS+S N ++ QV+N + ++ EV N +VI N + +
Sbjct: 1093 EPLESSDILSSS----NGDEASSNGLQVLNDELSMESEVSSSENTEVIEAPNS----MGE 1144
Query: 357 SHGKEAIEN 365
+ K IE+
Sbjct: 1145 AKKKRKIES 1153
>UNIPROTKB|E1BA41 [details] [associations]
symbol:KDM4B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR007527 Pfam:PF02373 PROSITE:PS50966 PROSITE:PS51184
SMART:SM00249 SMART:SM00558 InterPro:IPR002999 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
SMART:SM00333 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 GeneTree:ENSGT00530000063342 KO:K06709 CTD:23030
OMA:QTEKEAP EMBL:DAAA02019590 EMBL:DAAA02019591 EMBL:DAAA02019592
IPI:IPI00689692 RefSeq:XP_002688966.2 RefSeq:XP_584880.4
Ensembl:ENSBTAT00000020586 GeneID:508141 KEGG:bta:508141
Uniprot:E1BA41
Length = 1116
Score = 189 (71.6 bits), Expect = 3.2e-10, Sum P(2) = 3.2e-10
Identities = 32/69 (46%), Positives = 48/69 (69%)
Query: 2 FLVEQVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDW 61
FL ++T +SP +LK G+P + Q +GEF++TFP YH+GFN GFNCAE+ N A + W
Sbjct: 238 FLRHKMTLISPIILKKYGIPFSRITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATLRW 297
Query: 62 LAHGQQAVE 70
+ +G+ A +
Sbjct: 298 IDYGKVATQ 306
Score = 45 (20.9 bits), Expect = 3.2e-10, Sum P(2) = 3.2e-10
Identities = 18/68 (26%), Positives = 36/68 (52%)
Query: 647 GVALMDE------DQNSPSGQ-NSVEEEAQLVLRGLFQKASPKELKVMQRILYSEGRSDE 699
GVAL++E ++ +P EEEAQL+ +G + S ++ + R+ ++ +SD
Sbjct: 431 GVALLEEAGGSTKEEAAPEADPEEEEEEAQLLPQGREAEGSEEDGRGKLRL--AKAKSDR 488
Query: 700 WRVALATL 707
+ + +L
Sbjct: 489 KKKSYGSL 496
>UNIPROTKB|F1PHR7 [details] [associations]
symbol:KDM4C "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050681 "androgen receptor binding"
evidence=IEA] [GO:0032454 "histone demethylase activity (H3-K9
specific)" evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IEA] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0000790 "nuclear
chromatin" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 InterPro:IPR002999
GO:GO:0046872 GO:GO:0008284 GO:GO:0008270 GO:GO:0006357
GO:GO:0000790 SMART:SM00333 InterPro:IPR003349 PROSITE:PS51183
Pfam:PF02375 GeneTree:ENSGT00530000063342 GO:GO:0032454 OMA:DIIQGER
EMBL:AAEX03007833 EMBL:AAEX03007834 EMBL:AAEX03007835
Ensembl:ENSCAFT00000002249 Uniprot:F1PHR7
Length = 1053
Score = 195 (73.7 bits), Expect = 3.3e-10, Sum P(2) = 3.3e-10
Identities = 35/67 (52%), Positives = 48/67 (71%)
Query: 2 FLVEQVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDW 61
FL ++T +SPSVLK G+P + Q +GEF++TFP YH+GFN GFNCAE+ N A V W
Sbjct: 239 FLRHKMTLISPSVLKKYGIPFDKITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATVRW 298
Query: 62 LAHGQQA 68
+ +G+ A
Sbjct: 299 IDYGKVA 305
Score = 38 (18.4 bits), Expect = 3.3e-10, Sum P(2) = 3.3e-10
Identities = 8/26 (30%), Positives = 13/26 (50%)
Query: 396 CNSSNSHKDPNKDQPSCSRVIEGTCS 421
C S+S + N++ S +EG S
Sbjct: 375 CTGSHSKRLKNEEDEEVSPAVEGAQS 400
>RGD|1306378 [details] [associations]
symbol:Kdm4a "lysine (K)-specific demethylase 4A" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0005730
"nucleolus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0005813 "centrosome" evidence=IEA;ISO]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0014898 "cardiac
muscle hypertrophy in response to stress" evidence=ISO] [GO:0016577
"histone demethylation" evidence=ISO] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IEA;ISO] [GO:0035064 "methylated
histone residue binding" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0051864 "histone demethylase activity (H3-K36 specific)"
evidence=IEA;ISO] [GO:0070544 "histone H3-K36 demethylation"
evidence=ISO] InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 InterPro:IPR002999
RGD:1306378 GO:GO:0005737 GO:GO:0005813 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 SMART:SM00333
GeneTree:ENSGT00530000063342 GO:GO:0051864 CTD:9682 KO:K06709
OrthoDB:EOG4QRH37 EMBL:CH474008 IPI:IPI00949993
RefSeq:NP_001101436.1 UniGene:Rn.95937 Ensembl:ENSRNOT00000066165
GeneID:313539 KEGG:rno:313539 UCSC:RGD:1306378 NextBio:666373
Uniprot:D4A2N4
Length = 971
Score = 192 (72.6 bits), Expect = 3.5e-10, Sum P(2) = 3.5e-10
Identities = 35/68 (51%), Positives = 48/68 (70%)
Query: 2 FLVEQVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDW 61
FL ++T +SP +LK G+P V Q +GEF++TFP YH+GFN GFNCAE+ N A W
Sbjct: 146 FLRHKMTLISPLMLKKYGIPFDKVTQEAGEFMITFPYGYHAGFNHGFNCAESTNFATRRW 205
Query: 62 LAHGQQAV 69
+ +G+QAV
Sbjct: 206 IEYGKQAV 213
Score = 40 (19.1 bits), Expect = 3.5e-10, Sum P(2) = 3.5e-10
Identities = 12/36 (33%), Positives = 17/36 (47%)
Query: 675 LFQKASPKELKVMQRILYSEGRSDEWRVALATLIEE 710
+F + K+ K QR++ S R D AL I E
Sbjct: 936 IFTEKEVKQEKKRQRVINSRYREDYIEPALYRAIME 971
>UNIPROTKB|E1BPL5 [details] [associations]
symbol:KDM4A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051864 "histone demethylase activity (H3-K36
specific)" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0035064 "methylated
histone residue binding" evidence=IEA] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 InterPro:IPR002999
GO:GO:0005737 GO:GO:0005813 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 SMART:SM00333 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 GO:GO:0051864 CTD:9682 KO:K06709
OMA:KRTAGCC EMBL:DAAA02009042 IPI:IPI00690786 RefSeq:NP_001193245.1
UniGene:Bt.58925 Ensembl:ENSBTAT00000002687 GeneID:512622
KEGG:bta:512622 NextBio:20870473 Uniprot:E1BPL5
Length = 1066
Score = 193 (73.0 bits), Expect = 3.5e-10, Sum P(2) = 3.5e-10
Identities = 42/99 (42%), Positives = 59/99 (59%)
Query: 2 FLVEQVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDW 61
FL ++T +SP +LK G+P V Q +GEF++TFP YH+GFN GFNCAE+ N A W
Sbjct: 237 FLRHKMTLISPLMLKKYGIPFDKVTQEAGEFMITFPYGYHAGFNHGFNCAESTNFATRRW 296
Query: 62 LAHGQQAVELYSEQHRKTSLSHDKLLFGSVQAAIKALWE 100
+ +G+QAV L S + +S D + Q LW+
Sbjct: 297 IEYGKQAV-LCSCRKDMVKISMD-VFVRKFQPERYKLWK 333
Score = 40 (19.1 bits), Expect = 3.5e-10, Sum P(2) = 3.5e-10
Identities = 12/36 (33%), Positives = 17/36 (47%)
Query: 675 LFQKASPKELKVMQRILYSEGRSDEWRVALATLIEE 710
+F + K+ K QR++ S R D AL I E
Sbjct: 1031 IFTEKEVKQEKKRQRVINSRYREDYIEPALYRAIME 1066
>MGI|MGI:2446210 [details] [associations]
symbol:Kdm4a "lysine (K)-specific demethylase 4A"
species:10090 "Mus musculus" [GO:0005634 "nucleus" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0014898 "cardiac muscle hypertrophy in response to stress"
evidence=IMP] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016577
"histone demethylation" evidence=ISO] [GO:0016702 "oxidoreductase
activity, acting on single donors with incorporation of molecular
oxygen, incorporation of two atoms of oxygen" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=ISO]
[GO:0035064 "methylated histone residue binding" evidence=ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0051864 "histone demethylase activity (H3-K36 specific)"
evidence=ISO] [GO:0055114 "oxidation-reduction process"
evidence=ISO] [GO:0070544 "histone H3-K36 demethylation"
evidence=ISO] InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373
PROSITE:PS50016 PROSITE:PS51184 SMART:SM00249 SMART:SM00558
InterPro:IPR002999 MGI:MGI:2446210 GO:GO:0005737 GO:GO:0005813
GO:GO:0045892 GO:GO:0005730 GO:GO:0046872 GO:GO:0008270
GO:GO:0006351 GO:GO:0016702 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 eggNOG:COG5141 PROSITE:PS01359
SMART:SM00333 PROSITE:PS50304 GO:GO:0035064 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 GO:GO:0051864 CTD:9682 KO:K06709
OMA:KRTAGCC OrthoDB:EOG4QRH37 ChiTaRS:Kdm4A EMBL:AK129187
EMBL:AK054095 EMBL:AK136085 EMBL:AK145066 EMBL:AK145947
EMBL:AL626764 EMBL:BC028866 IPI:IPI00169645 IPI:IPI00648673
RefSeq:NP_001155295.1 RefSeq:NP_759014.2 UniGene:Mm.234234
ProteinModelPortal:Q8BW72 SMR:Q8BW72 STRING:Q8BW72
PhosphoSite:Q8BW72 PRIDE:Q8BW72 Ensembl:ENSMUST00000097911
Ensembl:ENSMUST00000106403 Ensembl:ENSMUST00000106406 GeneID:230674
KEGG:mmu:230674 HOVERGEN:HBG080483 InParanoid:A2A8L8 NextBio:380043
Bgee:Q8BW72 CleanEx:MM_JMJD2A Genevestigator:Q8BW72
GermOnline:ENSMUSG00000033326 Uniprot:Q8BW72
Length = 1064
Score = 192 (72.6 bits), Expect = 4.5e-10, Sum P(2) = 4.5e-10
Identities = 35/68 (51%), Positives = 48/68 (70%)
Query: 2 FLVEQVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDW 61
FL ++T +SP +LK G+P V Q +GEF++TFP YH+GFN GFNCAE+ N A W
Sbjct: 237 FLRHKMTLISPLMLKKYGIPFDKVTQEAGEFMITFPYGYHAGFNHGFNCAESTNFATRRW 296
Query: 62 LAHGQQAV 69
+ +G+QAV
Sbjct: 297 IEYGKQAV 304
Score = 40 (19.1 bits), Expect = 4.5e-10, Sum P(2) = 4.5e-10
Identities = 12/36 (33%), Positives = 17/36 (47%)
Query: 675 LFQKASPKELKVMQRILYSEGRSDEWRVALATLIEE 710
+F + K+ K QR++ S R D AL I E
Sbjct: 1029 IFTEKEVKQEKKRQRVINSRYREDYIEPALYRAIME 1064
>ZFIN|ZDB-GENE-060503-664 [details] [associations]
symbol:kdm4b "lysine (K)-specific demethylase 4B"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001965
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00249
SMART:SM00558 InterPro:IPR002999 ZFIN:ZDB-GENE-060503-664
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
eggNOG:COG5141 SMART:SM00333 InterPro:IPR003349 PROSITE:PS51183
Pfam:PF02375 SMART:SM00545 GeneTree:ENSGT00530000063342
HOGENOM:HOG000231125 KO:K06709 HOVERGEN:HBG080483 CTD:23030
OrthoDB:EOG4N5VW5 EMBL:BX927276 OMA:QTEKEAP EMBL:BC171698
EMBL:BC171700 IPI:IPI00775179 RefSeq:NP_001076274.1
UniGene:Dr.81759 SMR:Q1LUQ0 Ensembl:ENSDART00000034084
Ensembl:ENSDART00000128161 GeneID:556504 KEGG:dre:556504
InParanoid:Q1LUQ0 NextBio:20881518 Uniprot:Q1LUQ0
Length = 1134
Score = 189 (71.6 bits), Expect = 5.4e-10, Sum P(2) = 5.4e-10
Identities = 32/69 (46%), Positives = 47/69 (68%)
Query: 2 FLVEQVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDW 61
FL ++T +SPS+LK +P + Q GEF++TFP YH+GFN GFNCAE+ N A + W
Sbjct: 318 FLRHKMTLISPSILKKYSIPFDRITQEEGEFMITFPYGYHAGFNHGFNCAESTNFATLRW 377
Query: 62 LAHGQQAVE 70
+ +G+ A +
Sbjct: 378 IDYGKMAAQ 386
Score = 43 (20.2 bits), Expect = 5.4e-10, Sum P(2) = 5.4e-10
Identities = 10/31 (32%), Positives = 20/31 (64%)
Query: 305 LSASHVSVNSHN----EGNDETQVMNKKAKV 331
L+AS++ + H E DETQ++ K++++
Sbjct: 980 LNASYIKEHVHRYYQVEFQDETQLLLKRSEI 1010
>UNIPROTKB|Q5RD88 [details] [associations]
symbol:KDM4A "Lysine-specific demethylase 4A" species:9601
"Pongo abelii" [GO:0035064 "methylated histone residue binding"
evidence=ISS] InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373
PROSITE:PS50016 PROSITE:PS51184 SMART:SM00249 SMART:SM00558
InterPro:IPR002999 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0008270 GO:GO:0006351 GO:GO:0016568 GO:GO:0016702
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS01359 SMART:SM00333 PROSITE:PS50304
GO:GO:0035064 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 CTD:9682 KO:K06709 EMBL:CR858028
RefSeq:NP_001125120.1 UniGene:Pab.1791 ProteinModelPortal:Q5RD88
SMR:Q5RD88 GeneID:100172003 KEGG:pon:100172003 InParanoid:Q5RD88
Uniprot:Q5RD88
Length = 1064
Score = 193 (73.0 bits), Expect = 8.2e-10, Sum P(3) = 8.2e-10
Identities = 42/99 (42%), Positives = 59/99 (59%)
Query: 2 FLVEQVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDW 61
FL ++T +SP +LK G+P V Q +GEF++TFP YH+GFN GFNCAE+ N A W
Sbjct: 237 FLRHKMTLISPLMLKKYGIPFDKVTQEAGEFMITFPYGYHAGFNHGFNCAESTNFATRRW 296
Query: 62 LAHGQQAVELYSEQHRKTSLSHDKLLFGSVQAAIKALWE 100
+ +G+QAV L S + +S D + Q LW+
Sbjct: 297 IEYGKQAV-LCSCRKDMVKISMD-VFVRKFQPERYKLWK 333
Score = 41 (19.5 bits), Expect = 8.2e-10, Sum P(3) = 8.2e-10
Identities = 16/57 (28%), Positives = 27/57 (47%)
Query: 268 SSSPRVENIVEGNGPCCSRSHVSSEVVQSEPQRGTSGLSASHVSVNSHNEGNDETQV 324
S S + + G+G SR VSS+ SEP + ++V+S+ +G+ V
Sbjct: 502 SGSKKKSSSSLGSGS--SRDSVSSDSETSEPLSCRAQGQTGVLTVHSYAKGDGRVTV 556
Score = 40 (19.1 bits), Expect = 8.2e-10, Sum P(3) = 8.2e-10
Identities = 12/36 (33%), Positives = 17/36 (47%)
Query: 675 LFQKASPKELKVMQRILYSEGRSDEWRVALATLIEE 710
+F + K+ K QR++ S R D AL I E
Sbjct: 1029 IFTEKEVKQEKKRQRVINSRYREDYIESALYRAIME 1064
Score = 37 (18.1 bits), Expect = 2.1e-09, Sum P(3) = 2.1e-09
Identities = 21/91 (23%), Positives = 36/91 (39%)
Query: 334 EVCIDLNMDVIPDGNESKLLLSDSHGKEAIENLKAHLSACYQ--EKVLCSGTVKEQDTMQ 391
E C + +M+ + DG E L S K I K H C + ++V S ++D
Sbjct: 367 EECPEDDMEGVEDGEEGDL--KTSLAKHRI-GTKRH-RVCLEIPQEVSQSELFPKEDLSS 422
Query: 392 VRSDCNSSNSHKDPNKDQPSCSRVIEGTCSF 422
+ + + P + S R +E +F
Sbjct: 423 EQYEMTECPAALAPVRPTHSSVRQVEDGLTF 453
>UNIPROTKB|E2RFE0 [details] [associations]
symbol:KDM4A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051864 "histone demethylase activity (H3-K36
specific)" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0035064 "methylated
histone residue binding" evidence=IEA] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 InterPro:IPR002999
GO:GO:0005737 GO:GO:0005813 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 SMART:SM00333 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 GO:GO:0051864 CTD:9682 KO:K06709
OMA:KRTAGCC EMBL:AAEX03009807 EMBL:AAEX03009806 RefSeq:XP_851005.1
Ensembl:ENSCAFT00000007898 GeneID:482530 KEGG:cfa:482530
NextBio:20857109 Uniprot:E2RFE0
Length = 1066
Score = 193 (73.0 bits), Expect = 8.2e-10, Sum P(3) = 8.2e-10
Identities = 42/99 (42%), Positives = 59/99 (59%)
Query: 2 FLVEQVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDW 61
FL ++T +SP +LK G+P V Q +GEF++TFP YH+GFN GFNCAE+ N A W
Sbjct: 237 FLRHKMTLISPLMLKKYGIPFDKVTQEAGEFMITFPYGYHAGFNHGFNCAESTNFATRRW 296
Query: 62 LAHGQQAVELYSEQHRKTSLSHDKLLFGSVQAAIKALWE 100
+ +G+QAV L S + +S D + Q LW+
Sbjct: 297 IEYGKQAV-LCSCRKDMVKISMD-VFVRKFQPERYKLWK 333
Score = 41 (19.5 bits), Expect = 8.2e-10, Sum P(3) = 8.2e-10
Identities = 14/47 (29%), Positives = 24/47 (51%)
Query: 281 GPCCSRSHVSSEVVQSEPQRGTSGLSASHVSVNSHNEGNDETQVMNK 327
G SR +SS+ SEP + + ++V+S+ +G D VM +
Sbjct: 515 GSSSSRDSISSDSETSEPLSCRAQGQSGVLTVHSYAKG-DGRVVMGE 560
Score = 40 (19.1 bits), Expect = 8.2e-10, Sum P(3) = 8.2e-10
Identities = 12/36 (33%), Positives = 17/36 (47%)
Query: 675 LFQKASPKELKVMQRILYSEGRSDEWRVALATLIEE 710
+F + K+ K QR++ S R D AL I E
Sbjct: 1031 IFTEKEVKQEKKRQRVINSRYREDYIEPALYRAIME 1066
>UNIPROTKB|O75164 [details] [associations]
symbol:KDM4A "Lysine-specific demethylase 4A" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0051864 "histone demethylase activity (H3-K36 specific)"
evidence=IDA] [GO:0016577 "histone demethylation" evidence=IDA]
[GO:0035064 "methylated histone residue binding" evidence=IDA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IPI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0070544 "histone
H3-K36 demethylation" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813
"centrosome" evidence=IDA] InterPro:IPR001965 InterPro:IPR003347
Pfam:PF02373 PROSITE:PS50016 PROSITE:PS51184 SMART:SM00249
SMART:SM00558 InterPro:IPR002999 GO:GO:0005737 GO:GO:0005813
GO:GO:0045892 GO:GO:0019048 GO:GO:0005730 GO:GO:0046872
GO:GO:0008270 GO:GO:0006351 GO:GO:0016702 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
eggNOG:COG5141 PROSITE:PS01359 SMART:SM00333 PROSITE:PS50304
GO:GO:0035064 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 GO:GO:0051864 PDB:2YBP PDB:2YBS PDBsum:2YBP
PDBsum:2YBS PDB:3U4S PDBsum:3U4S CTD:9682 EMBL:AB014577
EMBL:AL451062 EMBL:AC092815 EMBL:BC002558 IPI:IPI00005666
RefSeq:NP_055478.2 UniGene:Hs.155983 PDB:2GF7 PDB:2GFA PDB:2GP3
PDB:2GP5 PDB:2OQ6 PDB:2OQ7 PDB:2OS2 PDB:2OT7 PDB:2OX0 PDB:2P5B
PDB:2PXJ PDB:2Q8C PDB:2Q8D PDB:2Q8E PDB:2QQR PDB:2QQS PDB:2VD7
PDB:2WWJ PDB:2YBK PDB:3NJY PDB:3PDQ PDB:3RVH PDB:4AI9 PDB:4GD4
PDBsum:2GF7 PDBsum:2GFA PDBsum:2GP3 PDBsum:2GP5 PDBsum:2OQ6
PDBsum:2OQ7 PDBsum:2OS2 PDBsum:2OT7 PDBsum:2OX0 PDBsum:2P5B
PDBsum:2PXJ PDBsum:2Q8C PDBsum:2Q8D PDBsum:2Q8E PDBsum:2QQR
PDBsum:2QQS PDBsum:2VD7 PDBsum:2WWJ PDBsum:2YBK PDBsum:3NJY
PDBsum:3PDQ PDBsum:3RVH PDBsum:4AI9 PDBsum:4GD4
ProteinModelPortal:O75164 SMR:O75164 DIP:DIP-29372N IntAct:O75164
MINT:MINT-2829088 STRING:O75164 PhosphoSite:O75164 PRIDE:O75164
Ensembl:ENST00000372396 GeneID:9682 KEGG:hsa:9682 UCSC:uc001cjx.3
GeneCards:GC01P044115 H-InvDB:HIX0020610 HGNC:HGNC:22978
HPA:HPA007610 MIM:609764 neXtProt:NX_O75164 PharmGKB:PA164721403
HOGENOM:HOG000231125 InParanoid:O75164 KO:K06709 OMA:KRTAGCC
OrthoDB:EOG4QRH37 PhylomeDB:O75164 BindingDB:O75164
ChEMBL:CHEMBL5896 ChiTaRS:Kdm4A EvolutionaryTrace:O75164
GenomeRNAi:9682 NextBio:36361 ArrayExpress:O75164 Bgee:O75164
CleanEx:HS_JMJD2A Genevestigator:O75164 GermOnline:ENSG00000066135
Uniprot:O75164
Length = 1064
Score = 193 (73.0 bits), Expect = 1.0e-09, Sum P(3) = 1.0e-09
Identities = 42/99 (42%), Positives = 59/99 (59%)
Query: 2 FLVEQVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDW 61
FL ++T +SP +LK G+P V Q +GEF++TFP YH+GFN GFNCAE+ N A W
Sbjct: 237 FLRHKMTLISPLMLKKYGIPFDKVTQEAGEFMITFPYGYHAGFNHGFNCAESTNFATRRW 296
Query: 62 LAHGQQAVELYSEQHRKTSLSHDKLLFGSVQAAIKALWE 100
+ +G+QAV L S + +S D + Q LW+
Sbjct: 297 IEYGKQAV-LCSCRKDMVKISMD-VFVRKFQPERYKLWK 333
Score = 40 (19.1 bits), Expect = 1.0e-09, Sum P(3) = 1.0e-09
Identities = 12/36 (33%), Positives = 17/36 (47%)
Query: 675 LFQKASPKELKVMQRILYSEGRSDEWRVALATLIEE 710
+F + K+ K QR++ S R D AL I E
Sbjct: 1029 IFTEKEVKQEKKRQRVINSRYREDYIEPALYRAIME 1064
Score = 40 (19.1 bits), Expect = 1.0e-09, Sum P(3) = 1.0e-09
Identities = 15/57 (26%), Positives = 27/57 (47%)
Query: 268 SSSPRVENIVEGNGPCCSRSHVSSEVVQSEPQRGTSGLSASHVSVNSHNEGNDETQV 324
S S + + G+G SR +SS+ SEP + ++V+S+ +G+ V
Sbjct: 502 SGSKKKSSSSLGSGS--SRDSISSDSETSEPLSCRAQGQTGVLTVHSYAKGDGRVTV 556
Score = 38 (18.4 bits), Expect = 1.6e-09, Sum P(3) = 1.6e-09
Identities = 21/91 (23%), Positives = 36/91 (39%)
Query: 334 EVCIDLNMDVIPDGNESKLLLSDSHGKEAIENLKAHLSACYQ--EKVLCSGTVKEQDTMQ 391
E C + +M+ + DG E L S K I K H C + ++V S ++D
Sbjct: 367 EECPEEDMEGVEDGEEGDL--KTSLAKHRI-GTKRH-RVCLEIPQEVSQSELFPKEDLSS 422
Query: 392 VRSDCNSSNSHKDPNKDQPSCSRVIEGTCSF 422
+ + + P + S R +E +F
Sbjct: 423 EQYEMTECPAALAPVRPTHSSVRQVEDGLTF 453
>MGI|MGI:2442355 [details] [associations]
symbol:Kdm4b "lysine (K)-specific demethylase 4B"
species:10090 "Mus musculus" [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0016702 "oxidoreductase
activity, acting on single donors with incorporation of molecular
oxygen, incorporation of two atoms of oxygen" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] InterPro:IPR001965
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS50016 PROSITE:PS51184
SMART:SM00249 SMART:SM00558 InterPro:IPR002999 MGI:MGI:2442355
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0008270
GO:GO:0006351 GO:GO:0016568 GO:GO:0016702 Gene3D:3.30.40.10
InterPro:IPR013083 eggNOG:COG5141 PROSITE:PS01359 SMART:SM00333
PROSITE:PS50304 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 GeneTree:ENSGT00530000063342 HOGENOM:HOG000231125
KO:K06709 CTD:23030 OrthoDB:EOG4N5VW5 ChiTaRS:KDM4B EMBL:AK129233
EMBL:AK141879 EMBL:BC005480 EMBL:BC007145 IPI:IPI00127444
IPI:IPI00460708 RefSeq:NP_742144.1 UniGene:Mm.45047
ProteinModelPortal:Q91VY5 SMR:Q91VY5 STRING:Q91VY5
PhosphoSite:Q91VY5 PRIDE:Q91VY5 Ensembl:ENSMUST00000025036
GeneID:193796 KEGG:mmu:193796 UCSC:uc008dbu.2 InParanoid:Q91VY5
OMA:QRTRPLI NextBio:371516 Bgee:Q91VY5 CleanEx:MM_JMJD2B
Genevestigator:Q91VY5 GermOnline:ENSMUSG00000024201 Uniprot:Q91VY5
Length = 1086
Score = 189 (71.6 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 32/69 (46%), Positives = 48/69 (69%)
Query: 2 FLVEQVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDW 61
FL ++T +SP +LK G+P + Q +GEF++TFP YH+GFN GFNCAE+ N A + W
Sbjct: 238 FLRHKMTLISPIILKKYGIPFSRITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATLRW 297
Query: 62 LAHGQQAVE 70
+ +G+ A +
Sbjct: 298 IDYGKVATQ 306
Score = 38 (18.4 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 7/17 (41%), Positives = 12/17 (70%)
Query: 680 SPKELKVMQRILYSEGR 696
SP+ L M+ +L ++GR
Sbjct: 1065 SPEYLSFMESLLQAQGR 1081
>TAIR|locus:504955644 [details] [associations]
symbol:REF6 "relative of early flowering 6"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0010228 "vegetative to reproductive phase transition of
meristem" evidence=IMP] [GO:0035067 "negative regulation of histone
acetylation" evidence=IMP] [GO:0009741 "response to brassinosteroid
stimulus" evidence=IMP] [GO:0009826 "unidimensional cell growth"
evidence=IMP] [GO:0033169 "histone H3-K9 demethylation"
evidence=IMP] [GO:0048366 "leaf development" evidence=IMP]
InterPro:IPR003347 InterPro:IPR007087 InterPro:IPR013087
InterPro:IPR015880 Pfam:PF02373 PROSITE:PS00028 PROSITE:PS50157
PROSITE:PS51184 SMART:SM00355 SMART:SM00558 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0006355 GO:GO:0046872
GO:GO:0008270 GO:GO:0006351 GO:GO:0003676 GO:GO:0009826
GO:GO:0016702 Gene3D:3.30.160.60 GO:GO:0010228 GO:GO:0048366
GO:GO:0033169 GO:GO:0009741 GO:GO:0035067 EMBL:AL049659
InterPro:IPR003349 PROSITE:PS51183 HSSP:P08151 Pfam:PF02375
SMART:SM00545 EMBL:AY664499 IPI:IPI00537359 PIR:T06699
RefSeq:NP_680116.2 UniGene:At.3169 ProteinModelPortal:Q9STM3
SMR:Q9STM3 DIP:DIP-46006N IntAct:Q9STM3 PaxDb:Q9STM3 PRIDE:Q9STM3
EnsemblPlants:AT3G48430.1 GeneID:824002 KEGG:ath:AT3G48430
TAIR:At3g48430 eggNOG:NOG303077 HOGENOM:HOG000082763
InParanoid:Q9STM3 OMA:ELVINHE PhylomeDB:Q9STM3
ProtClustDB:CLSN2918915 Genevestigator:Q9STM3 Uniprot:Q9STM3
Length = 1360
Score = 187 (70.9 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 48/127 (37%), Positives = 70/127 (55%)
Query: 3 LVEQVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWL 62
L E+ T +SP V G+P +VQ+ GEFV+TFP AYHSGF+ GFN EA N+A +WL
Sbjct: 299 LGEKTTVMSPEVFVKAGIPCCRLVQNPGEFVVTFPGAYHSGFSHGFNFGEASNIATPEWL 358
Query: 63 AHGQQAVELYSEQHRKTSLSHDKLLFGSVQAAIKALWELSVLQKKTPGNRKWKDACGKDG 122
+ A + + +SH +LL+ V A+ + S+ K P + + KD +G
Sbjct: 359 RMAKDAAIRRAAINYPPMVSHLQLLYDFV-LALGSRVPTSINPK--PRSSRLKDKARSEG 415
Query: 123 V-LTKAI 128
LTK +
Sbjct: 416 ERLTKKL 422
Score = 39 (18.8 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 6/9 (66%), Positives = 7/9 (77%)
Query: 484 CGKLWCSKQ 492
CGK+W S Q
Sbjct: 884 CGKVWMSHQ 892
>ASPGD|ASPL0000057825 [details] [associations]
symbol:AN1060 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR017956 Pfam:PF02373 PROSITE:PS51184
SMART:SM00249 SMART:SM00384 SMART:SM00558 GO:GO:0005634
EMBL:BN001308 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0008168 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
EnsemblFungi:CADANIAT00001580 HOGENOM:HOG000206472 OMA:NIEKQRS
Uniprot:C8VTU6
Length = 1405
Score = 176 (67.0 bits), Expect = 4.2e-09, Sum P(2) = 4.2e-09
Identities = 33/68 (48%), Positives = 48/68 (70%)
Query: 2 FLVEQVTQLSPSVLKAE-GVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVD 60
FL + +SPS+LK++ G+ V +V + GEFV+T+P YHSG+N G+NCAE+VN A
Sbjct: 438 FLRHKTYLVSPSLLKSQYGITVNKMVHYEGEFVITYPYGYHSGYNLGYNCAESVNFATEK 497
Query: 61 WLAHGQQA 68
WL +G+ A
Sbjct: 498 WLDYGRVA 505
Score = 50 (22.7 bits), Expect = 4.2e-09, Sum P(2) = 4.2e-09
Identities = 12/43 (27%), Positives = 21/43 (48%)
Query: 282 PCCSRSHVSSEVVQSEPQRGTSGLSASHVSVNSHNEGNDETQV 324
P +++H+ S+ S Q+ + SH + NSH N+ V
Sbjct: 999 PQVTKAHLQSQQQHSHQQQ-QQNTNGSHSTANSHLPANNFANV 1040
Score = 42 (19.8 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 9/40 (22%), Positives = 20/40 (50%)
Query: 258 MDCCEQKESSSSSPRVENIVEGNGPCCSRSHVSSEVVQSE 297
+D ++KE+ ++ N V+G P R + E+ + +
Sbjct: 1139 LDVLQKKETETAKQEAANKVKGATPKLPRKYAYLELQREQ 1178
>FB|FBgn0033233 [details] [associations]
symbol:Kdm4A "Histone demethylase 4A" species:7227
"Drosophila melanogaster" [GO:0005634 "nucleus" evidence=ISS;IDA]
[GO:0016577 "histone demethylation" evidence=ISS] [GO:0051864
"histone demethylase activity (H3-K36 specific)"
evidence=ISS;IDA;IMP] [GO:0033169 "histone H3-K9 demethylation"
evidence=IMP] [GO:0032454 "histone demethylase activity (H3-K9
specific)" evidence=IMP] [GO:0070544 "histone H3-K36 demethylation"
evidence=IMP] [GO:0010628 "positive regulation of gene expression"
evidence=IMP] InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184
SMART:SM00558 EMBL:AE013599 GO:GO:0005634 GO:GO:0045892
GO:GO:0046872 GO:GO:0006351 GO:GO:0016702 GO:GO:0010628
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 GO:GO:0051864 eggNOG:NOG317950
GO:GO:0032454 EMBL:AY058636 RefSeq:NP_610331.1 UniGene:Dm.4139
ProteinModelPortal:Q9V333 SMR:Q9V333 MINT:MINT-800097 STRING:Q9V333
PaxDb:Q9V333 PRIDE:Q9V333 EnsemblMetazoa:FBtr0088886 GeneID:35744
KEGG:dme:Dmel_CG15835 UCSC:CG15835-RA CTD:9682 FlyBase:FBgn0033233
InParanoid:Q9V333 OMA:FASKRWI OrthoDB:EOG46T1GM PhylomeDB:Q9V333
GenomeRNAi:35744 NextBio:795007 Bgee:Q9V333 GermOnline:CG15835
Uniprot:Q9V333
Length = 495
Score = 163 (62.4 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 28/67 (41%), Positives = 44/67 (65%)
Query: 2 FLVEQVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDW 61
+L ++T +SP VL+ +P + Q +GE ++TFP YH+GFN GFN AE+ N A W
Sbjct: 244 YLRHKMTMISPKVLRQHNIPYNKITQEAGEIMITFPFGYHAGFNHGFNGAESTNFASKRW 303
Query: 62 LAHGQQA 68
+ +G++A
Sbjct: 304 IEYGKRA 310
>SGD|S000000971 [details] [associations]
symbol:RPH1 "JmjC domain-containing histone demethylase"
species:4932 "Saccharomyces cerevisiae" [GO:0001078 "RNA polymerase
II core promoter proximal region sequence-specific DNA binding
transcription factor activity involved in negative regulation of
transcription" evidence=IMP;IDA] [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA;IC] [GO:0043565
"sequence-specific DNA binding" evidence=IMP;IDA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0051864 "histone demethylase activity
(H3-K36 specific)" evidence=IMP;IDA] [GO:0032454 "histone
demethylase activity (H3-K9 specific)" evidence=IDA] [GO:0016577
"histone demethylation" evidence=IMP;IDA] Pfam:PF00096
InterPro:IPR003347 InterPro:IPR007087 InterPro:IPR013087
InterPro:IPR015880 Pfam:PF02373 PROSITE:PS00028 PROSITE:PS50157
PROSITE:PS51184 SMART:SM00355 SMART:SM00558 SGD:S000000971
GO:GO:0005634 GO:GO:0046872 GO:GO:0001078 GO:GO:0043565
GO:GO:0008270 EMBL:BK006939 eggNOG:COG5048 Gene3D:3.30.160.60
EMBL:U18922 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 GeneTree:ENSGT00530000063342 HOGENOM:HOG000112726
OrthoDB:EOG4NGKW6 GO:GO:0051864 GO:GO:0032454 PIR:S50672
RefSeq:NP_011096.1 PDB:3OPT PDB:3OPW PDBsum:3OPT PDBsum:3OPW
ProteinModelPortal:P39956 SMR:P39956 DIP:DIP-5418N IntAct:P39956
MINT:MINT-518485 STRING:P39956 PaxDb:P39956 PeptideAtlas:P39956
EnsemblFungi:YER169W GeneID:856916 KEGG:sce:YER169W CYGD:YER169w
OMA:EFLRHKM EvolutionaryTrace:P39956 NextBio:983368
Genevestigator:P39956 GermOnline:YER169W Uniprot:P39956
Length = 796
Score = 161 (61.7 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 29/67 (43%), Positives = 44/67 (65%)
Query: 2 FLVEQVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDW 61
FL ++ SP +L+ G+ +V H GEF++T+P YH+GFN G+N AE+VN A +W
Sbjct: 284 FLRHKMFLASPKLLQENGIRCNEIVHHEGEFMITYPYGYHAGFNYGYNLAESVNFALEEW 343
Query: 62 LAHGQQA 68
L G++A
Sbjct: 344 LPIGKKA 350
Score = 52 (23.4 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 36/170 (21%), Positives = 64/170 (37%)
Query: 250 DMESEVFPMDCCEQKESSSSSPRVENIVEGNGPCCSRSHVSSEVVQSEPQRGTSGLSASH 309
D E + M S++SSPR+ P SR + S+E+ ++P + + +
Sbjct: 481 DHEDNIVAMSLTSMANSAASSPRL--------PL-SRLNSSNELSNAQPLLDMTNNTLAF 531
Query: 310 VSVNSHNEGNDETQVMNKKAK-VKHEVC---IDLNMDVIP---DGNESKLLLSDSHGKEA 362
N + N + NK + H ++ N+ +I N L +S +
Sbjct: 532 PRPNGPSGLNPLLYISNKNISGISHSAPHSPVNPNISLIKRVKSPNIVTLNISRESSRSP 591
Query: 363 IE-NLKAHLSACYQEKVLCSGTVKEQDTMQVRSDCNSSNSHKDPNKDQPS 411
I N +A Q TV T V + +N K P+ ++P+
Sbjct: 592 IALNYEARQQHSQQHSFSTPSTVSNLST-SVLGPLSDTNDIKTPHPERPN 640
>CGD|CAL0004209 [details] [associations]
symbol:orf19.2730 species:5476 "Candida albicans" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 CGD:CAL0004209
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 EMBL:AACQ01000023
EMBL:AACQ01000025 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
eggNOG:NOG317950 RefSeq:XP_720249.1 RefSeq:XP_720480.1
ProteinModelPortal:Q5AF79 GeneID:3637861 GeneID:3638072
KEGG:cal:CaO19.10244 KEGG:cal:CaO19.2730 Uniprot:Q5AF79
Length = 606
Score = 156 (60.0 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 27/66 (40%), Positives = 41/66 (62%)
Query: 2 FLVEQVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDW 61
FL + +SP+ L+ G+ V H + GEF++T+P YH+GFN +N AE+VN A DW
Sbjct: 271 FLRHKTFMVSPAYLEKHGIRVNHTIHREGEFIITYPYGYHAGFNYDYNLAESVNFALDDW 330
Query: 62 LAHGQQ 67
G++
Sbjct: 331 FEFGKR 336
>UNIPROTKB|Q5AF79 [details] [associations]
symbol:RPH2 "Potential jumonji-like transcriptional
repressor of PHR1" species:237561 "Candida albicans SC5314"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001965
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00249
SMART:SM00558 CGD:CAL0004209 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 EMBL:AACQ01000023 EMBL:AACQ01000025
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 eggNOG:NOG317950
RefSeq:XP_720249.1 RefSeq:XP_720480.1 ProteinModelPortal:Q5AF79
GeneID:3637861 GeneID:3638072 KEGG:cal:CaO19.10244
KEGG:cal:CaO19.2730 Uniprot:Q5AF79
Length = 606
Score = 156 (60.0 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 27/66 (40%), Positives = 41/66 (62%)
Query: 2 FLVEQVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDW 61
FL + +SP+ L+ G+ V H + GEF++T+P YH+GFN +N AE+VN A DW
Sbjct: 271 FLRHKTFMVSPAYLEKHGIRVNHTIHREGEFIITYPYGYHAGFNYDYNLAESVNFALDDW 330
Query: 62 LAHGQQ 67
G++
Sbjct: 331 FEFGKR 336
>UNIPROTKB|F1RUJ7 [details] [associations]
symbol:JARID2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051574 "positive regulation of histone H3-K9
methylation" evidence=IEA] [GO:0048863 "stem cell differentiation"
evidence=IEA] [GO:0048538 "thymus development" evidence=IEA]
[GO:0048536 "spleen development" evidence=IEA] [GO:0035098
"ESC/E(Z) complex" evidence=IEA] [GO:0031061 "negative regulation
of histone methylation" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0001889 "liver development" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR001606
InterPro:IPR003347 InterPro:IPR004198 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00501
SMART:SM00558 GO:GO:0008285 GO:GO:0003677 GO:GO:0048863
GO:GO:0001889 GO:GO:0003682 GO:GO:0000122 GO:GO:0048536
GO:GO:0048538 Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0051574
GO:GO:0035097 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 GO:GO:0031061 GeneTree:ENSGT00530000063118
OMA:QRLACIK EMBL:CT841540 EMBL:CT737348 Ensembl:ENSSSCT00000001155
Uniprot:F1RUJ7
Length = 1232
Score = 156 (60.0 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 33/94 (35%), Positives = 51/94 (54%)
Query: 3 LVEQVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWL 62
++E +SP VL EGV V+ VQ SG+FV+ FP ++ S CG++ +E V+ A W
Sbjct: 972 MLESNVMISPEVLCREGVKVHRAVQQSGQFVVCFPGSFVSKVCCGYSVSETVHFATTQWT 1031
Query: 63 AHGQQAVELYSEQHRKTSLSHDKLLFGSVQAAIK 96
+ G + + +H S +KLL+ QA K
Sbjct: 1032 SMGFETAKEMKRRHIAKPFSMEKLLYQIAQAEAK 1065
>MGI|MGI:104813 [details] [associations]
symbol:Jarid2 "jumonji, AT rich interactive domain 2"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IGI]
[GO:0001889 "liver development" evidence=IMP] [GO:0003677 "DNA
binding" evidence=IDA;TAS] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IMP] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0031061 "negative regulation of histone methylation"
evidence=IDA] [GO:0032452 "histone demethylase activity"
evidence=IDA] [GO:0035097 "histone methyltransferase complex"
evidence=IDA] [GO:0035098 "ESC/E(Z) complex" evidence=IDA]
[GO:0042127 "regulation of cell proliferation" evidence=IMP]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0048536 "spleen development" evidence=IMP]
[GO:0048538 "thymus development" evidence=IMP] [GO:0048863 "stem
cell differentiation" evidence=IMP] [GO:0051574 "positive
regulation of histone H3-K9 methylation" evidence=IDA]
InterPro:IPR001606 InterPro:IPR003347 InterPro:IPR004198
Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00501 SMART:SM00558 MGI:MGI:104813
GO:GO:0008285 GO:GO:0003677 GO:GO:0048863 GO:GO:0001889
GO:GO:0006351 GO:GO:0003682 GO:GO:0016568 GO:GO:0000122
GO:GO:0048536 GO:GO:0048538 Gene3D:1.10.150.60 SUPFAM:SSF46774
EMBL:CH466546 GO:GO:0051574 GO:GO:0035097 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 CTD:3720
eggNOG:NOG327026 HOGENOM:HOG000013203 HOVERGEN:HBG052160 KO:K11478
OrthoDB:EOG4KKZ26 GO:GO:0031061 GeneTree:ENSGT00530000063118
OMA:QRLACIK EMBL:D31967 EMBL:AK045214 EMBL:AK147226 EMBL:AK164134
EMBL:BC003374 EMBL:BC052444 EMBL:BC060695 IPI:IPI00124575
IPI:IPI00955365 PIR:T30254 RefSeq:NP_001191972.1
RefSeq:NP_001191973.1 RefSeq:NP_068678.1 UniGene:Mm.25059 PDB:2RQ5
PDBsum:2RQ5 ProteinModelPortal:Q62315 SMR:Q62315 DIP:DIP-34312N
IntAct:Q62315 MINT:MINT-4792531 STRING:Q62315 PhosphoSite:Q62315
PRIDE:Q62315 Ensembl:ENSMUST00000044608 Ensembl:ENSMUST00000173246
Ensembl:ENSMUST00000173704 GeneID:16468 KEGG:mmu:16468
UCSC:uc007qgr.1 UCSC:uc007qgv.1 InParanoid:Q3TPU4 ChiTaRS:JARID2
EvolutionaryTrace:Q62315 NextBio:289745 Bgee:Q62315
CleanEx:MM_JARID2 Genevestigator:Q62315
GermOnline:ENSMUSG00000038518 Uniprot:Q62315
Length = 1234
Score = 156 (60.0 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 32/94 (34%), Positives = 51/94 (54%)
Query: 3 LVEQVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWL 62
++E +SP VL +G+ V+ VQ SG+FV+ FP ++ S CG+N +E V+ A W
Sbjct: 976 MLESNVMISPEVLCKKGIKVHRTVQQSGQFVVCFPGSFVSKVCCGYNVSETVHFATTQWT 1035
Query: 63 AHGQQAVELYSEQHRKTSLSHDKLLFGSVQAAIK 96
+ G + + +H S +KLL+ QA K
Sbjct: 1036 SMGFETAKEMKRRHIAKPFSMEKLLYQIAQAEAK 1069
>UNIPROTKB|Q9U297 [details] [associations]
symbol:jmjd-2 "Lysine-specific demethylase 4" species:6239
"Caenorhabditis elegans" [GO:0070544 "histone H3-K36 demethylation"
evidence=IMP] [GO:0051864 "histone demethylase activity (H3-K36
specific)" evidence=IMP] [GO:0016577 "histone demethylation"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184
SMART:SM00249 SMART:SM00558 GO:GO:0005634 GO:GO:0045892
GO:GO:0046872 GO:GO:0008270 GO:GO:0006351 GO:GO:0016702
EMBL:AL110490 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 GeneTree:ENSGT00530000063342 GO:GO:0051864
eggNOG:NOG317950 KO:K06709 PIR:T27007 RefSeq:NP_496969.2
ProteinModelPortal:Q9U297 SMR:Q9U297 DIP:DIP-26971N
MINT:MINT-1077527 STRING:Q9U297 PaxDb:Q9U297
EnsemblMetazoa:Y48B6A.11 GeneID:175080 KEGG:cel:CELE_Y48B6A.11
UCSC:Y48B6A.11 CTD:175080 WormBase:Y48B6A.11 HOGENOM:HOG000021888
InParanoid:Q9U297 OMA:SSEHADR NextBio:886668 Uniprot:Q9U297
Length = 922
Score = 164 (62.8 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 29/68 (42%), Positives = 43/68 (63%)
Query: 2 FLVEQVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDW 61
FL + ++P +L+ G+P +VQ EF++TFPR YH GFN G+N AE+ N A W
Sbjct: 317 FLRHKTYLVTPELLRQAGIPYATMVQRPNEFIITFPRGYHMGFNLGYNLAESTNFASQRW 376
Query: 62 LAHGQQAV 69
+ +G+ AV
Sbjct: 377 IDYGKDAV 384
Score = 39 (18.8 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 623 TTEVNKNSSSGLSCSEAETKSKIFGVAL 650
+T + + SSG S SE T+ F AL
Sbjct: 456 STATDSDGSSGSSGSEEATEGSSFMRAL 483
>UNIPROTKB|Q92833 [details] [associations]
symbol:JARID2 "Protein Jumonji" species:9606 "Homo sapiens"
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001889 "liver
development" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0048536 "spleen development" evidence=IEA]
[GO:0048538 "thymus development" evidence=IEA] [GO:0051574
"positive regulation of histone H3-K9 methylation" evidence=ISS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0031061 "negative regulation of histone
methylation" evidence=ISS] [GO:0035098 "ESC/E(Z) complex"
evidence=IDA] [GO:0032452 "histone demethylase activity"
evidence=ISS] [GO:0048863 "stem cell differentiation" evidence=ISS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0003682 "chromatin
binding" evidence=ISS] [GO:0007417 "central nervous system
development" evidence=TAS] InterPro:IPR001606 InterPro:IPR003347
InterPro:IPR004198 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00501 SMART:SM00558
GO:GO:0045892 GO:GO:0008285 GO:GO:0003677 GO:GO:0048863
GO:GO:0007417 GO:GO:0001889 GO:GO:0006351 GO:GO:0003682
GO:GO:0016568 GO:GO:0000122 GO:GO:0048536 GO:GO:0048538
EMBL:CH471087 Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0051574
GO:GO:0035097 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 CTD:3720 eggNOG:NOG327026 HOGENOM:HOG000013203
HOVERGEN:HBG052160 KO:K11478 OrthoDB:EOG4KKZ26 GO:GO:0031061
EMBL:U57592 EMBL:AK292861 EMBL:AK299349 EMBL:AK303610 EMBL:AL136162
EMBL:AL021938 EMBL:BC046184 EMBL:BC046246 IPI:IPI00023756
IPI:IPI00871836 IPI:IPI00955447 RefSeq:NP_001253969.1
RefSeq:NP_004964.2 UniGene:Hs.269059 ProteinModelPortal:Q92833
SMR:Q92833 DIP:DIP-45494N IntAct:Q92833 STRING:Q92833
PhosphoSite:Q92833 DMDM:61252601 PaxDb:Q92833 PRIDE:Q92833
Ensembl:ENST00000341776 Ensembl:ENST00000397311 GeneID:3720
KEGG:hsa:3720 UCSC:uc003nbj.3 GeneCards:GC06P015246 HGNC:HGNC:6196
HPA:HPA044909 MIM:601594 neXtProt:NX_Q92833 PharmGKB:PA29995
InParanoid:Q92833 OMA:QRLACIK GenomeRNAi:3720 NextBio:14577
ArrayExpress:Q92833 Bgee:Q92833 CleanEx:HS_JARID2
Genevestigator:Q92833 GermOnline:ENSG00000008083 Uniprot:Q92833
Length = 1246
Score = 155 (59.6 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 32/94 (34%), Positives = 51/94 (54%)
Query: 3 LVEQVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWL 62
++E +SP VL EG+ V+ VQ SG+FV+ FP ++ S CG++ +E V+ A W
Sbjct: 978 MLESNVMISPEVLCKEGIKVHRTVQQSGQFVVCFPGSFVSKVCCGYSVSETVHFATTQWT 1037
Query: 63 AHGQQAVELYSEQHRKTSLSHDKLLFGSVQAAIK 96
+ G + + +H S +KLL+ QA K
Sbjct: 1038 SMGFETAKEMKRRHIAKPFSMEKLLYQIAQAEAK 1071
>UNIPROTKB|F1MH56 [details] [associations]
symbol:JARID2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051574 "positive regulation of histone H3-K9
methylation" evidence=IEA] [GO:0048863 "stem cell differentiation"
evidence=IEA] [GO:0048538 "thymus development" evidence=IEA]
[GO:0048536 "spleen development" evidence=IEA] [GO:0035098
"ESC/E(Z) complex" evidence=IEA] [GO:0031061 "negative regulation
of histone methylation" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0001889 "liver development" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR001606
InterPro:IPR003347 InterPro:IPR004198 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00501
SMART:SM00558 GO:GO:0008285 GO:GO:0003677 GO:GO:0048863
GO:GO:0001889 GO:GO:0003682 GO:GO:0000122 GO:GO:0048536
GO:GO:0048538 Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0051574
GO:GO:0035097 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 GO:GO:0031061 GeneTree:ENSGT00530000063118
OMA:QRLACIK EMBL:DAAA02055659 EMBL:DAAA02055660 EMBL:DAAA02055661
EMBL:DAAA02055662 IPI:IPI00689067 ProteinModelPortal:F1MH56
Ensembl:ENSBTAT00000017189 NextBio:20874777 Uniprot:F1MH56
Length = 1248
Score = 155 (59.6 bits), Expect = 4.4e-07, P = 4.4e-07
Identities = 32/94 (34%), Positives = 51/94 (54%)
Query: 3 LVEQVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWL 62
++E +SP VL EG+ V+ VQ SG+FV+ FP ++ S CG++ +E V+ A W
Sbjct: 990 MLESNVMISPEVLCREGIKVHRTVQQSGQFVVCFPGSFVSKVCCGYSVSETVHFATTQWT 1049
Query: 63 AHGQQAVELYSEQHRKTSLSHDKLLFGSVQAAIK 96
+ G + + +H S +KLL+ QA K
Sbjct: 1050 SMGFETAKEMKRRHIAKPFSMEKLLYQIAQAEAK 1083
>UNIPROTKB|F1P6D5 [details] [associations]
symbol:JARID2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051574 "positive regulation of histone H3-K9
methylation" evidence=IEA] [GO:0048863 "stem cell differentiation"
evidence=IEA] [GO:0048538 "thymus development" evidence=IEA]
[GO:0048536 "spleen development" evidence=IEA] [GO:0035098
"ESC/E(Z) complex" evidence=IEA] [GO:0031061 "negative regulation
of histone methylation" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0001889 "liver development" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR001606
InterPro:IPR003347 InterPro:IPR004198 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00501
SMART:SM00558 GO:GO:0008285 GO:GO:0003677 GO:GO:0048863
GO:GO:0001889 GO:GO:0003682 GO:GO:0000122 GO:GO:0048536
GO:GO:0048538 Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0051574
GO:GO:0035097 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 GO:GO:0031061 GeneTree:ENSGT00530000063118
EMBL:AAEX03017561 EMBL:AAEX03017558 EMBL:AAEX03017559
EMBL:AAEX03017560 Ensembl:ENSCAFT00000015718 Uniprot:F1P6D5
Length = 1249
Score = 155 (59.6 bits), Expect = 4.4e-07, P = 4.4e-07
Identities = 32/94 (34%), Positives = 51/94 (54%)
Query: 3 LVEQVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWL 62
++E +SP VL EG+ V+ VQ SG+FV+ FP ++ S CG++ +E V+ A W
Sbjct: 981 MLESNVMISPEVLCKEGIKVHRTVQQSGQFVVCFPGSFVSKVCCGYSVSETVHFATTQWT 1040
Query: 63 AHGQQAVELYSEQHRKTSLSHDKLLFGSVQAAIK 96
+ G + + +H S +KLL+ QA K
Sbjct: 1041 SMGFETAKEMKRRHIAKPFSMEKLLYQIAQAEAK 1074
>UNIPROTKB|J9NWC2 [details] [associations]
symbol:JARID2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] InterPro:IPR001606 InterPro:IPR003347
InterPro:IPR004198 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00501 SMART:SM00558
GO:GO:0005634 GO:GO:0003677 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 OMA:QRLACIK EMBL:AAEX03017561
EMBL:AAEX03017558 EMBL:AAEX03017559 EMBL:AAEX03017560
Ensembl:ENSCAFT00000043518 Uniprot:J9NWC2
Length = 1259
Score = 155 (59.6 bits), Expect = 4.4e-07, P = 4.4e-07
Identities = 32/94 (34%), Positives = 51/94 (54%)
Query: 3 LVEQVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWL 62
++E +SP VL EG+ V+ VQ SG+FV+ FP ++ S CG++ +E V+ A W
Sbjct: 991 MLESNVMISPEVLCKEGIKVHRTVQQSGQFVVCFPGSFVSKVCCGYSVSETVHFATTQWT 1050
Query: 63 AHGQQAVELYSEQHRKTSLSHDKLLFGSVQAAIK 96
+ G + + +H S +KLL+ QA K
Sbjct: 1051 SMGFETAKEMKRRHIAKPFSMEKLLYQIAQAEAK 1084
>CGD|CAL0004229 [details] [associations]
symbol:orf19.2743 species:5476 "Candida albicans" [GO:0005575
"cellular_component" evidence=ND] [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0016577 "histone demethylation" evidence=IEA] [GO:0051864
"histone demethylase activity (H3-K36 specific)" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0032454 "histone demethylase activity (H3-K9 specific)"
evidence=IEA] [GO:0001078 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in negative regulation of transcription" evidence=IEA]
InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184
SMART:SM00249 SMART:SM00558 CGD:CAL0004229 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 EMBL:AACQ01000023 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 RefSeq:XP_720493.1
ProteinModelPortal:Q5AFV0 GeneID:3637916 KEGG:cal:CaO19.2743
Uniprot:Q5AFV0
Length = 606
Score = 156 (60.0 bits), Expect = 6.9e-07, Sum P(2) = 6.9e-07
Identities = 27/66 (40%), Positives = 41/66 (62%)
Query: 2 FLVEQVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDW 61
FL + +SP+ L+ G+ V H + GEF++T+P YH+GFN +N AE+VN A DW
Sbjct: 271 FLRHKTFMVSPAYLEKHGIRVNHTIHREGEFIITYPYGYHAGFNYDYNLAESVNFALDDW 330
Query: 62 LAHGQQ 67
G++
Sbjct: 331 FEFGKR 336
Score = 40 (19.1 bits), Expect = 6.9e-07, Sum P(2) = 6.9e-07
Identities = 33/147 (22%), Positives = 59/147 (40%)
Query: 290 SSEVVQSEP-QRGTSGLSASHV-SVNSHNEGNDETQVMNKKAKVKHEVCIDLNMDVIPDG 347
S EVV+ E QR +V + N+H + T+ +K+ + HE + N
Sbjct: 383 SIEVVKVEKIQRKCRKRKQDNVHTTNTHERVS--TKRPHKQPDIPHECALCPNTLQHTKY 440
Query: 348 NES---KLLLSDSHGKEAIENLKAH--LSACYQEKVLC---SGTVKEQDTM-----QVRS 394
+ S +LL +D++G + H ++ + ++ C + TV D + ++R
Sbjct: 441 SHSALFELLQADTYGTTPERPRRVHKICASMFPHQLKCDFKTNTVHGLDDITKNQKKLRC 500
Query: 395 D-CNSSNSHKDPNKDQPSCSRVIEGTC 420
C S C+R GTC
Sbjct: 501 GVCRQSEMGACFQCSYKKCTRAFHGTC 527
>UNIPROTKB|Q5AFV0 [details] [associations]
symbol:RPH1 "Potential jumonji-like transcriptional
repressor of PHR1" species:237561 "Candida albicans SC5314"
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001965
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00249
SMART:SM00558 CGD:CAL0004229 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 EMBL:AACQ01000023 InterPro:IPR003349 PROSITE:PS51183
Pfam:PF02375 RefSeq:XP_720493.1 ProteinModelPortal:Q5AFV0
GeneID:3637916 KEGG:cal:CaO19.2743 Uniprot:Q5AFV0
Length = 606
Score = 156 (60.0 bits), Expect = 6.9e-07, Sum P(2) = 6.9e-07
Identities = 27/66 (40%), Positives = 41/66 (62%)
Query: 2 FLVEQVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDW 61
FL + +SP+ L+ G+ V H + GEF++T+P YH+GFN +N AE+VN A DW
Sbjct: 271 FLRHKTFMVSPAYLEKHGIRVNHTIHREGEFIITYPYGYHAGFNYDYNLAESVNFALDDW 330
Query: 62 LAHGQQ 67
G++
Sbjct: 331 FEFGKR 336
Score = 40 (19.1 bits), Expect = 6.9e-07, Sum P(2) = 6.9e-07
Identities = 33/147 (22%), Positives = 59/147 (40%)
Query: 290 SSEVVQSEP-QRGTSGLSASHV-SVNSHNEGNDETQVMNKKAKVKHEVCIDLNMDVIPDG 347
S EVV+ E QR +V + N+H + T+ +K+ + HE + N
Sbjct: 383 SIEVVKVEKIQRKCRKRKQDNVHTTNTHERVS--TKRPHKQPDIPHECALCPNTLQHTKY 440
Query: 348 NES---KLLLSDSHGKEAIENLKAH--LSACYQEKVLC---SGTVKEQDTM-----QVRS 394
+ S +LL +D++G + H ++ + ++ C + TV D + ++R
Sbjct: 441 SHSALFELLQADTYGTTPERPRRVHKICASMFPHQLKCDFKTNTVHGLDDITKNQKKLRC 500
Query: 395 D-CNSSNSHKDPNKDQPSCSRVIEGTC 420
C S C+R GTC
Sbjct: 501 GVCRQSEMGACFQCSYKKCTRAFHGTC 527
>SGD|S000003880 [details] [associations]
symbol:JHD2 "JmjC domain family histone demethylase specific
for H3-K4" species:4932 "Saccharomyces cerevisiae" [GO:0032453
"histone demethylase activity (H3-K4 specific)" evidence=IDA;IMP]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0016577 "histone demethylation" evidence=IDA;IMP] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR019787 Pfam:PF00628 Pfam:PF02373 PROSITE:PS50016
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 SGD:S000003880
GO:GO:0005634 GO:GO:0005737 EMBL:BK006943 GO:GO:0046872
GO:GO:0008270 GO:GO:0016702 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 eggNOG:NOG327026 GeneTree:ENSGT00530000063118
EMBL:Z49619 EMBL:Z49620 PIR:S57142 RefSeq:NP_012653.1
ProteinModelPortal:P47156 SMR:P47156 DIP:DIP-4835N IntAct:P47156
MINT:MINT-537060 STRING:P47156 PaxDb:P47156 EnsemblFungi:YJR119C
GeneID:853583 KEGG:sce:YJR119C CYGD:YJR119c HOGENOM:HOG000113131
OMA:RNISGMT OrthoDB:EOG44N21B NextBio:974376 Genevestigator:P47156
GermOnline:YJR119C GO:GO:0032453 Uniprot:P47156
Length = 728
Score = 155 (59.6 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 30/70 (42%), Positives = 42/70 (60%)
Query: 3 LVEQVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWL 62
LV ++ P+ K G+PVY VQ E+++TFP+ YH+GFN G+N EAVN WL
Sbjct: 480 LVTLISPYDPN-FKKSGIPVYKAVQKPNEYIITFPKCYHAGFNTGYNFNEAVNFTIDFWL 538
Query: 63 AHGQQAVELY 72
+G A+ Y
Sbjct: 539 PYGFGAITDY 548
Score = 37 (18.1 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 7/19 (36%), Positives = 9/19 (47%)
Query: 606 NHLCMEYWNHKLLTFGKTT 624
NHL + WN T K +
Sbjct: 660 NHLSIRQWNELSTTDSKVS 678
>ZFIN|ZDB-GENE-060503-246 [details] [associations]
symbol:jarid2b "jumonji, AT rich interactive domain
2b" species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0003677
"DNA binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=ISS] [GO:0032452 "histone demethylase activity"
evidence=ISS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0035097 "histone methyltransferase
complex" evidence=ISS] [GO:0035098 "ESC/E(Z) complex" evidence=ISS]
[GO:0051574 "positive regulation of histone H3-K9 methylation"
evidence=ISS] [GO:0031061 "negative regulation of histone
methylation" evidence=ISS] [GO:0048863 "stem cell differentiation"
evidence=ISS] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
InterPro:IPR001606 InterPro:IPR003347 InterPro:IPR004198
Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00558 ZFIN:ZDB-GENE-060503-246
GO:GO:0007275 GO:GO:0045892 GO:GO:0003677 GO:GO:0048863
GO:GO:0006351 GO:GO:0003682 GO:GO:0016568 Gene3D:1.10.150.60
SUPFAM:SSF46774 GO:GO:0051574 GO:GO:0035097 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 eggNOG:NOG327026 HOGENOM:HOG000013203
HOVERGEN:HBG052160 KO:K11478 OrthoDB:EOG4KKZ26 GO:GO:0031061
EMBL:BX842609 EMBL:BX890540 IPI:IPI00500491 RefSeq:NP_001189388.1
UniGene:Dr.108454 Ensembl:ENSDART00000147627 GeneID:558456
KEGG:dre:558456 CTD:558456 GeneTree:ENSGT00530000063118
InParanoid:Q1LVC2 OMA:CDESEIS NextBio:20882479 Bgee:Q1LVC2
Uniprot:Q1LVC2
Length = 1319
Score = 145 (56.1 bits), Expect = 5.6e-06, P = 5.6e-06
Identities = 59/227 (25%), Positives = 103/227 (45%)
Query: 3 LVEQVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWL 62
++E+ +SP VL EG+ V+ VQ SG+FV+ FP A+ S CG++ +E V+ A W+
Sbjct: 1048 MLEKNVMISPEVLCREGIKVHRTVQQSGQFVVVFPGAFVSRVCCGYSVSETVHFATPQWM 1107
Query: 63 AHGQQAVELYSEQHRKTSLSHDKLLFGSVQAAIK-----ALWELSVLQKKTPG-NRKWKD 116
G +A + + S +KLL+ A K L +S L K K +
Sbjct: 1108 NLGYEAAKDLKCRRIAKPFSMEKLLYQIATAEAKRENRLVLSTISSLLKDLRNIEMKQRQ 1167
Query: 117 ACGKDGVLTKAIKTRVQMKKEGLQKLPSYFKLQKMEIDFDLKTERECFSCFYDLHLSAAG 176
+ G+L+ A R + K +K + + +ER C C + +LS
Sbjct: 1168 ELYEAGLLSSA---RYCTHDHNQSPADTRKKPRKW-LALE-SSERRCQMCQHLCYLSMV- 1221
Query: 177 CKCSPDRFACLKHANIFCSCEIDHRFV--ILRYSTDELNTLVEALEG 221
+ + + CL+ A + + R + + RY +++N+LV + G
Sbjct: 1222 VQENENVVFCLECALHYVEKHKNCRGLKMMYRYDEEQINSLVNQVCG 1268
>ZFIN|ZDB-GENE-061218-1 [details] [associations]
symbol:jarid2a "jumonji, AT rich interactive domain
2a" species:7955 "Danio rerio" [GO:0005634 "nucleus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] InterPro:IPR001606 InterPro:IPR003347
InterPro:IPR004198 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00501 SMART:SM00558
ZFIN:ZDB-GENE-061218-1 GO:GO:0005634 GO:GO:0003677
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 GeneTree:ENSGT00530000063118
EMBL:CR391941 IPI:IPI00799170 Ensembl:ENSDART00000086333
Bgee:E7F6J7 Uniprot:E7F6J7
Length = 1171
Score = 151 (58.2 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 28/86 (32%), Positives = 52/86 (60%)
Query: 3 LVEQVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWL 62
++E+ +SP VL+ +GV VY VQHSG+F++ FP + + CG++ +E ++ A + W+
Sbjct: 915 MLERNIMISPEVLRRKGVKVYRTVQHSGQFMVCFPGTFVAKVCCGYSVSETMHFANLQWM 974
Query: 63 AHGQQAVELYSEQHRKTSLSHDKLLF 88
G +A + + + S +KLL+
Sbjct: 975 KLGYEAAKDLKRRRIEEPFSTEKLLY 1000
Score = 41 (19.5 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 669 QLVLRGLFQKASPKELKVMQRILYSE 694
+ LR + ++ SP+ LK+M R YSE
Sbjct: 1096 ECALRYIQKRRSPRGLKMMFR--YSE 1119
>UNIPROTKB|F1NWZ0 [details] [associations]
symbol:JARID2 "Protein Jumonji" species:9031 "Gallus
gallus" [GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001889 "liver
development" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0031061
"negative regulation of histone methylation" evidence=IEA]
[GO:0035098 "ESC/E(Z) complex" evidence=IEA] [GO:0048536 "spleen
development" evidence=IEA] [GO:0048538 "thymus development"
evidence=IEA] [GO:0048863 "stem cell differentiation" evidence=IEA]
[GO:0051574 "positive regulation of histone H3-K9 methylation"
evidence=IEA] InterPro:IPR001606 InterPro:IPR003347
InterPro:IPR004198 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00501 SMART:SM00558
GO:GO:0008285 GO:GO:0003677 GO:GO:0048863 GO:GO:0003682
GO:GO:0000122 Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0051574
GO:GO:0035097 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 IPI:IPI00597467 GO:GO:0031061
GeneTree:ENSGT00530000063118 OMA:QRLACIK EMBL:AADN02027529
EMBL:AADN02027521 EMBL:AADN02027522 EMBL:AADN02027523
EMBL:AADN02027524 EMBL:AADN02027525 EMBL:AADN02027526
EMBL:AADN02027527 EMBL:AADN02027528 Ensembl:ENSGALT00000020740
Uniprot:F1NWZ0
Length = 1220
Score = 138 (53.6 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 29/94 (30%), Positives = 49/94 (52%)
Query: 3 LVEQVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWL 62
++E +SP +L EG+ V+ VQ SG+FV+ FP ++ S CG++ +E V+ A W
Sbjct: 954 MLESNVMISPEILCKEGIRVHRTVQQSGQFVVCFPGSFVSKVCCGYSVSETVHFATTQWT 1013
Query: 63 AHGQQAVELYSEQHRKTSLSHDKLLFGSVQAAIK 96
+ G + + + S +KLL+ A K
Sbjct: 1014 SMGFKTAKEMKRRRIAKPFSMEKLLYQIATAEAK 1047
>UNIPROTKB|Q5F363 [details] [associations]
symbol:JARID2 "Protein Jumonji" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0035098
"ESC/E(Z) complex" evidence=ISS] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0003682 "chromatin
binding" evidence=ISS] [GO:0051574 "positive regulation of histone
H3-K9 methylation" evidence=ISS] [GO:0031061 "negative regulation
of histone methylation" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0032452 "histone demethylase activity"
evidence=ISS] [GO:0048863 "stem cell differentiation" evidence=ISS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISS] InterPro:IPR001606 InterPro:IPR003347
InterPro:IPR004198 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00501 SMART:SM00558
GO:GO:0007275 GO:GO:0045892 GO:GO:0003677 GO:GO:0048863
GO:GO:0006351 GO:GO:0003682 GO:GO:0016568 Gene3D:1.10.150.60
SUPFAM:SSF46774 GO:GO:0051574 GO:GO:0035097 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 EMBL:AJ851787
IPI:IPI00597467 RefSeq:NP_001012880.1 UniGene:Gga.12117
ProteinModelPortal:Q5F363 STRING:Q5F363 GeneID:420839
KEGG:gga:420839 CTD:3720 eggNOG:NOG327026 HOGENOM:HOG000013203
HOVERGEN:HBG052160 InParanoid:Q5F363 KO:K11478 OrthoDB:EOG4KKZ26
NextBio:20823696 GO:GO:0031061 Uniprot:Q5F363
Length = 1233
Score = 138 (53.6 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 29/94 (30%), Positives = 49/94 (52%)
Query: 3 LVEQVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWL 62
++E +SP +L EG+ V+ VQ SG+FV+ FP ++ S CG++ +E V+ A W
Sbjct: 967 MLESNVMISPEILCKEGIRVHRTVQQSGQFVVCFPGSFVSKVCCGYSVSETVHFATTQWT 1026
Query: 63 AHGQQAVELYSEQHRKTSLSHDKLLFGSVQAAIK 96
+ G + + + S +KLL+ A K
Sbjct: 1027 SMGFKTAKEMKRRRIAKPFSMEKLLYQIATAEAK 1060
>UNIPROTKB|Q3YBR2 [details] [associations]
symbol:TBRG1 "Transforming growth factor beta regulator 1"
species:9606 "Homo sapiens" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0007050 "cell
cycle arrest" evidence=IMP] [GO:0008285 "negative regulation of
cell proliferation" evidence=IMP] [GO:0050821 "protein
stabilization" evidence=IMP] [GO:0006260 "DNA replication"
evidence=IMP] [GO:0032066 "nucleolus to nucleoplasm transport"
evidence=IDA] InterPro:IPR003888 InterPro:IPR003889 Pfam:PF05964
Pfam:PF05965 PROSITE:PS51542 PROSITE:PS51543 SMART:SM00541
GO:GO:0005634 GO:GO:0008285 GO:GO:0050821 GO:GO:0006260
GO:GO:0007050 GO:GO:0032066 EMBL:DQ144542 EMBL:AK027527
EMBL:AK074140 EMBL:AY696294 EMBL:AK222936 EMBL:BC109269
EMBL:AL713631 EMBL:AL831881 IPI:IPI00045905 IPI:IPI00431454
IPI:IPI00827518 RefSeq:NP_116200.2 UniGene:Hs.436410 PDB:2WZO
PDBsum:2WZO ProteinModelPortal:Q3YBR2 SMR:Q3YBR2 IntAct:Q3YBR2
STRING:Q3YBR2 PhosphoSite:Q3YBR2 DMDM:121943045 PRIDE:Q3YBR2
Ensembl:ENST00000375005 Ensembl:ENST00000441174 GeneID:84897
KEGG:hsa:84897 UCSC:uc001qaj.4 UCSC:uc001qak.4 UCSC:uc001qal.4
CTD:84897 GeneCards:GC11P124492 HGNC:HGNC:29551 MIM:610614
neXtProt:NX_Q3YBR2 PharmGKB:PA134926528 eggNOG:NOG290127
HOVERGEN:HBG094027 InParanoid:Q3YBR2 OMA:GARKCIN ChiTaRS:TBRG1
EvolutionaryTrace:Q3YBR2 GenomeRNAi:84897 NextBio:75248
ArrayExpress:Q3YBR2 Bgee:Q3YBR2 CleanEx:HS_TBRG1
Genevestigator:Q3YBR2 Uniprot:Q3YBR2
Length = 411
Score = 124 (48.7 bits), Expect = 0.00021, P = 0.00021
Identities = 44/169 (26%), Positives = 73/169 (43%)
Query: 491 KQAIFPKGFRSRVNFYSVLNPEKVCNYISEVLDAGLLGPLFKVTLEECPSETFVNVSAQK 550
+ AI+P G+ S + S+ P++ C Y ++ D G+ P F++ E+ P V+ SA
Sbjct: 208 ESAIYPVGYCSTRIYASMKCPDQKCLYTCQIKDGGVQ-PQFEIVPEDDPQNAIVSSSADA 266
Query: 551 CWEMVLQRLNQEIERQGGLHERGLPHPQSLQSIDGLEMFGFLSSPIIQAIEALDPNHLCM 610
C +L+ ++ + G L LP G + FGF I I++ C+
Sbjct: 267 CHAELLRTISTTM---GKLMPNLLPA--------GADFFGFSHPAIHNLIQSCPGARKCI 315
Query: 611 EY-WNHKLLTFGKTTEVNKNSSSGLSCSEAETKSKIFGVALMDEDQNSP 658
Y W + F + GL ++A + F + DEDQN P
Sbjct: 316 NYQW----VKFDVCKPGDGQLPEGLPENDAAMSFEAFQRQIFDEDQNDP 360
>FB|FBgn0036004 [details] [associations]
symbol:Jarid2 "Jumonji, AT rich interactive domain 2"
species:7227 "Drosophila melanogaster" [GO:0005634 "nucleus"
evidence=ISS] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005719
"nuclear euchromatin" evidence=IDA] [GO:0035098 "ESC/E(Z) complex"
evidence=IDA] [GO:0061085 "regulation of histone H3-K27
methylation" evidence=IMP] [GO:0005700 "polytene chromosome"
evidence=IDA] InterPro:IPR001606 InterPro:IPR003347
InterPro:IPR017956 Pfam:PF01388 Pfam:PF02373 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00384 SMART:SM00558 EMBL:AE014296
GO:GO:0003677 GO:GO:0035098 GO:GO:0005719 GO:GO:0005700
Gene3D:1.10.150.60 SUPFAM:SSF46774 HSSP:Q24573 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 GO:GO:0061085 CTD:3720
KO:K11478 GeneTree:ENSGT00530000063118 FlyBase:FBgn0036004
RefSeq:NP_648324.1 UniGene:Dm.29618 ProteinModelPortal:Q9VT00
SMR:Q9VT00 MINT:MINT-1562739 STRING:Q9VT00
EnsemblMetazoa:FBtr0076468 GeneID:39103 KEGG:dme:Dmel_CG3654
UCSC:CG3654-RD InParanoid:Q9VT00 OMA:HESCEPA PhylomeDB:Q9VT00
GenomeRNAi:39103 NextBio:811931 ArrayExpress:Q9VT00 Bgee:Q9VT00
Uniprot:Q9VT00
Length = 2351
Score = 132 (51.5 bits), Expect = 0.00027, P = 0.00027
Identities = 50/213 (23%), Positives = 86/213 (40%)
Query: 12 PSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLAHGQQAVEL 71
P +L GV + + Q GEF++ FPRAY S G+ +E+V A + WL +
Sbjct: 2137 PHMLTDRGVSLCRIEQKPGEFIVVFPRAYTSSLATGYVVSESVYFATMSWLDLAKDDFRD 2196
Query: 72 YSEQHRKTSLSHDKLLFG-SVQAAIKALWELSVLQKKTPGNRKWKDACGKDGVLTKAIKT 130
E S ++LLF + + L + P D C K+ + ++
Sbjct: 2197 IHESCEPAMFSLEQLLFALGYDQRVNS----EALHQMLP---MLNDVCEKESAAREQLRA 2249
Query: 131 RVQMKKEGLQKLPSYFKLQKMEIDFDLKTERECFSCFYDLHLSAAGCKCSPDRFACLKHA 190
E +Q K +K + E EC C +L++S + CL+HA
Sbjct: 2250 AGVTSTEKVQAEKGQ-KAKKQQQPPYKSIESECDLCRANLYISMV--RTEDGNIYCLQHA 2306
Query: 191 --NIFC-SCEIDHRFVILRYSTDELNTLVEALE 220
N+ + + +I Y+ D++ L+ L+
Sbjct: 2307 LKNLNNGNIQAKQCKLIYAYNVDDIQQLIRQLQ 2339
>MGI|MGI:1100877 [details] [associations]
symbol:Tbrg1 "transforming growth factor beta regulated gene
1" species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO;ISS] [GO:0006260
"DNA replication" evidence=ISO;ISS] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007050 "cell cycle arrest" evidence=ISO;ISS]
[GO:0008285 "negative regulation of cell proliferation"
evidence=ISO;ISS] [GO:0032066 "nucleolus to nucleoplasm transport"
evidence=ISO;ISS] [GO:0050821 "protein stabilization"
evidence=ISO;ISS] InterPro:IPR003888 InterPro:IPR003889
Pfam:PF05964 Pfam:PF05965 PROSITE:PS51542 PROSITE:PS51543
SMART:SM00541 MGI:MGI:1100877 GO:GO:0005634 GO:GO:0008285
GO:GO:0050821 GO:GO:0006260 GO:GO:0007050 GO:GO:0032066 CTD:84897
eggNOG:NOG290127 HOVERGEN:HBG094027 OMA:GARKCIN ChiTaRS:TBRG1
EMBL:DQ144541 EMBL:AK150549 EMBL:AK151075 EMBL:AK151457
EMBL:AK151209 EMBL:AK166547 EMBL:BC021331 EMBL:BC040813
EMBL:BC043022 EMBL:BC065795 IPI:IPI00453544 RefSeq:NP_079565.2
UniGene:Mm.28689 ProteinModelPortal:Q3UB74 SMR:Q3UB74 STRING:Q3UB74
PhosphoSite:Q3UB74 PaxDb:Q3UB74 PRIDE:Q3UB74
Ensembl:ENSMUST00000117654 GeneID:21376 KEGG:mmu:21376
UCSC:uc009ovh.1 GeneTree:ENSGT00390000013374 InParanoid:Q3UB74
OrthoDB:EOG4K3KX2 NextBio:300600 Bgee:Q3UB74 CleanEx:MM_TBRG1
Genevestigator:Q3UB74 Uniprot:Q3UB74
Length = 406
Score = 122 (48.0 bits), Expect = 0.00034, P = 0.00034
Identities = 36/124 (29%), Positives = 60/124 (48%)
Query: 491 KQAIFPKGFRSRVNFYSVLNPEKVCNYISEVLDAGLLGPLFKVTLEECPSETFVNVSAQK 550
+ AI+P G+ S + S+ P++ C Y ++ D G+ P F++ E+ P T V SA
Sbjct: 203 ENAIYPVGYCSTRVYASMKCPDQKCLYTCQIKDGGVQ-PQFEIVPEDDPQNTIVGSSADA 261
Query: 551 CWEMVLQRLNQEIERQGGLHERGLPHPQSLQSIDGLEMFGFLSSPIIQAIEALDPNHLCM 610
C+E +L+ ++ G L +P+P S G + FGF I I++ C+
Sbjct: 262 CYEELLRAISATT---GKL----MPNPLSC----GADFFGFSHPTIHNLIQSCPEAQNCV 310
Query: 611 EY-W 613
Y W
Sbjct: 311 NYQW 314
>UNIPROTKB|G4NIH1 [details] [associations]
symbol:MGG_09841 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR003347
Pfam:PF02373 PROSITE:PS51184 SMART:SM00558 EMBL:CM001236
RefSeq:XP_003720398.1 EnsemblFungi:MGG_09841T0 GeneID:2680840
KEGG:mgr:MGG_09841 Uniprot:G4NIH1
Length = 419
Score = 122 (48.0 bits), Expect = 0.00036, P = 0.00036
Identities = 26/56 (46%), Positives = 32/56 (57%)
Query: 2 FLVEQVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVA 57
F+ T + L+ GV V VVQ +GE V T P AYHSGF+ G+ EAVN A
Sbjct: 287 FMRHNATLDGHAALRRAGVRVVPVVQRAGEIVATLPEAYHSGFSAGYTVCEAVNFA 342
>UNIPROTKB|I3LBA2 [details] [associations]
symbol:LOC100627866 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR003888
InterPro:IPR003889 Pfam:PF05964 Pfam:PF05965 PROSITE:PS51542
PROSITE:PS51543 SMART:SM00541 GO:GO:0005634
GeneTree:ENSGT00390000013374 Ensembl:ENSSSCT00000028534 OMA:LHKESER
Uniprot:I3LBA2
Length = 391
Score = 121 (47.7 bits), Expect = 0.00041, P = 0.00041
Identities = 44/176 (25%), Positives = 74/176 (42%)
Query: 491 KQAIFPKGFRSRVNFYSVLNPEKVCNYISEVLDAGLLGPLFKVTLEECPSETFVNVSAQK 550
+ AI+P G+ S + S+ +P++ C Y ++ D G GP F++ E+ P V+ SA
Sbjct: 188 ESAIYPVGYCSTRIYASMQHPDQECLYTCQIKDGGT-GPQFEIVPEDDPQNAIVSSSADA 246
Query: 551 CWEMVLQRLNQEIERQGGLHERGLPHPQSLQSIDGLEMFGFLSSPIIQAIEALDPNHLCM 610
C +L+ ++ + G L LP G + FGF I I++ C+
Sbjct: 247 CHAELLKTISAAM---GKLMPNMLP--------SGADFFGFSHPTIHNLIQSCPGARKCV 295
Query: 611 EY-WNHKLLTFGKTTEVNKNSSSGLSCSEAETKSKIFGVALMDEDQNSPSGQNSVE 665
Y W + F + ++ T + F DED N P Q S++
Sbjct: 296 SYQW----VKFDVCKPGDGPPPQRQLEDDSATSFEAFQRQTFDEDHNDPILQGSLD 347
>RGD|1305123 [details] [associations]
symbol:Tbrg1 "transforming growth factor beta regulator 1"
species:10116 "Rattus norvegicus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0006260 "DNA
replication" evidence=ISO] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0007050 "cell cycle arrest" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0008285 "negative regulation
of cell proliferation" evidence=ISO] [GO:0032066 "nucleolus to
nucleoplasm transport" evidence=ISO] [GO:0050821 "protein
stabilization" evidence=ISO] InterPro:IPR003888 InterPro:IPR003889
Pfam:PF05964 Pfam:PF05965 PROSITE:PS51542 PROSITE:PS51543
SMART:SM00541 RGD:1305123 GO:GO:0005634 GO:GO:0008285 GO:GO:0050821
GO:GO:0006260 GO:GO:0007050 GO:GO:0032066 CTD:84897
eggNOG:NOG290127 HOVERGEN:HBG094027 GeneTree:ENSGT00390000013374
OrthoDB:EOG4K3KX2 EMBL:BC087142 IPI:IPI00373260
RefSeq:NP_001009344.2 UniGene:Rn.129282 UniGene:Rn.203060
Ensembl:ENSRNOT00000039729 GeneID:300521 KEGG:rno:300521
UCSC:RGD:1305123 HOGENOM:HOG000154516 InParanoid:Q5PQK8
NextBio:647002 Genevestigator:Q5PQK8 Uniprot:Q5PQK8
Length = 406
Score = 121 (47.7 bits), Expect = 0.00044, P = 0.00044
Identities = 36/124 (29%), Positives = 60/124 (48%)
Query: 491 KQAIFPKGFRSRVNFYSVLNPEKVCNYISEVLDAGLLGPLFKVTLEECPSETFVNVSAQK 550
+ AI+P G+ S + S+ P++ C Y ++ D G+ P F++ E+ P T V SA
Sbjct: 203 ENAIYPVGYCSTRVYASMKCPDQKCLYTCQIKDGGVQ-PQFEIVPEDDPRNTIVGSSADA 261
Query: 551 CWEMVLQRLNQEIERQGGLHERGLPHPQSLQSIDGLEMFGFLSSPIIQAIEALDPNHLCM 610
C+E +L+ ++ G L +P+P S G + FGF I I++ C+
Sbjct: 262 CYEELLRAISAAT---GKL----MPNPLSC----GADFFGFSHPTIHNLIQSCPEAQNCV 310
Query: 611 EY-W 613
Y W
Sbjct: 311 NYQW 314
>UNIPROTKB|F1S7B3 [details] [associations]
symbol:TBRG1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR003888
InterPro:IPR003889 Pfam:PF05964 Pfam:PF05965 PROSITE:PS51542
PROSITE:PS51543 SMART:SM00541 GO:GO:0005634 CTD:84897 OMA:GARKCIN
GeneTree:ENSGT00390000013374 EMBL:CU633633 RefSeq:XP_003130068.1
UniGene:Ssc.3839 Ensembl:ENSSSCT00000016561 GeneID:100521637
KEGG:ssc:100521637 Uniprot:F1S7B3
Length = 411
Score = 121 (47.7 bits), Expect = 0.00045, P = 0.00045
Identities = 44/176 (25%), Positives = 74/176 (42%)
Query: 491 KQAIFPKGFRSRVNFYSVLNPEKVCNYISEVLDAGLLGPLFKVTLEECPSETFVNVSAQK 550
+ AI+P G+ S + S+ +P++ C Y ++ D G GP F++ E+ P V+ SA
Sbjct: 208 ESAIYPVGYCSTRIYASMQHPDQECLYTCQIKDGGT-GPQFEIVPEDDPQNAIVSSSADA 266
Query: 551 CWEMVLQRLNQEIERQGGLHERGLPHPQSLQSIDGLEMFGFLSSPIIQAIEALDPNHLCM 610
C +L+ ++ + G L LP G + FGF I I++ C+
Sbjct: 267 CHAELLKTISAAM---GKLMPNMLP--------SGADFFGFSHPTIHNLIQSCPGARKCV 315
Query: 611 EY-WNHKLLTFGKTTEVNKNSSSGLSCSEAETKSKIFGVALMDEDQNSPSGQNSVE 665
Y W + F + ++ T + F DED N P Q S++
Sbjct: 316 SYQW----VKFDVCKPGDGPPPQRQLEDDSATSFEAFQRQTFDEDHNDPILQGSLD 367
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.132 0.394 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 716 716 0.00084 121 3 11 22 0.41 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 112
No. of states in DFA: 626 (67 KB)
Total size of DFA: 404 KB (2195 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 66.66u 0.11s 66.77t Elapsed: 00:00:03
Total cpu time: 66.67u 0.11s 66.78t Elapsed: 00:00:03
Start: Sat May 11 04:26:45 2013 End: Sat May 11 04:26:48 2013
WARNINGS ISSUED: 1