Query 005056
Match_columns 716
No_of_seqs 376 out of 2667
Neff 8.3
Searched_HMMs 29240
Date Mon Mar 25 14:02:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005056.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/005056hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ihg_A RDME; flavoenzyme, anth 100.0 5.8E-79 2E-83 697.3 55.4 524 40-705 2-535 (535)
2 2r0c_A REBC; flavin adenine di 100.0 2.8E-68 9.7E-73 609.6 48.6 522 41-705 24-548 (549)
3 1pn0_A Phenol 2-monooxygenase; 100.0 2.8E-60 9.4E-65 553.4 53.2 557 41-706 6-648 (665)
4 2qa1_A PGAE, polyketide oxygen 100.0 5.4E-60 1.9E-64 534.5 52.0 488 39-706 7-497 (500)
5 2qa2_A CABE, polyketide oxygen 100.0 8.9E-60 3E-64 532.6 51.9 486 41-706 10-498 (499)
6 2dkh_A 3-hydroxybenzoate hydro 100.0 9.3E-57 3.2E-61 522.8 47.4 547 42-703 31-637 (639)
7 3fmw_A Oxygenase; mithramycin, 100.0 9.5E-54 3.2E-58 489.8 42.6 495 41-707 47-546 (570)
8 4hb9_A Similarities with proba 100.0 1.3E-40 4.4E-45 366.1 25.5 352 44-430 2-383 (412)
9 3rp8_A Flavoprotein monooxygen 100.0 8.7E-37 3E-41 336.4 32.3 341 39-431 19-370 (407)
10 1k0i_A P-hydroxybenzoate hydro 100.0 2.4E-36 8.2E-41 331.3 26.7 338 43-429 2-348 (394)
11 3c96_A Flavin-containing monoo 100.0 1.2E-35 4.1E-40 327.7 31.4 346 41-428 2-369 (410)
12 2x3n_A Probable FAD-dependent 100.0 1.6E-36 5.4E-41 333.4 23.7 341 41-431 4-359 (399)
13 2vou_A 2,6-dihydroxypyridine h 100.0 3.4E-36 1.2E-40 330.7 24.6 335 41-431 3-368 (397)
14 2xdo_A TETX2 protein; tetracyc 100.0 6.2E-35 2.1E-39 320.7 24.8 344 41-432 24-386 (398)
15 3oz2_A Digeranylgeranylglycero 100.0 1.2E-32 4.2E-37 300.5 36.2 329 41-419 2-338 (397)
16 3alj_A 2-methyl-3-hydroxypyrid 100.0 1.6E-33 5.5E-38 307.4 28.3 323 41-426 9-345 (379)
17 3e1t_A Halogenase; flavoprotei 100.0 4.1E-31 1.4E-35 299.8 29.6 349 40-431 4-369 (512)
18 3cgv_A Geranylgeranyl reductas 100.0 5E-31 1.7E-35 288.7 28.4 337 41-430 2-349 (397)
19 3c4a_A Probable tryptophan hyd 100.0 1.5E-32 5.3E-37 299.9 15.4 320 44-434 1-334 (381)
20 3nix_A Flavoprotein/dehydrogen 100.0 5.8E-30 2E-34 282.9 36.0 339 41-420 3-348 (421)
21 3atr_A Conserved archaeal prot 100.0 1.9E-30 6.6E-35 289.9 30.8 333 41-426 4-350 (453)
22 3i3l_A Alkylhalidase CMLS; fla 100.0 1.1E-30 3.9E-35 299.3 28.5 348 39-428 19-378 (591)
23 2pyx_A Tryptophan halogenase; 100.0 3.8E-30 1.3E-34 292.7 23.0 344 41-429 5-413 (526)
24 2gmh_A Electron transfer flavo 100.0 2.9E-28 1E-32 279.9 36.9 332 41-416 33-409 (584)
25 2aqj_A Tryptophan halogenase, 100.0 3.4E-27 1.2E-31 269.2 29.9 340 41-429 3-397 (538)
26 2weu_A Tryptophan 5-halogenase 100.0 4.6E-27 1.6E-31 266.5 28.9 336 44-429 3-405 (511)
27 2bry_A NEDD9 interacting prote 100.0 1.9E-28 6.4E-33 276.4 17.2 308 41-418 90-449 (497)
28 2e4g_A Tryptophan halogenase; 100.0 4.7E-27 1.6E-31 268.6 27.3 339 41-429 23-428 (550)
29 3ihm_A Styrene monooxygenase A 99.9 1.3E-24 4.3E-29 241.0 22.5 326 36-425 15-372 (430)
30 1yvv_A Amine oxidase, flavin-c 99.8 4.6E-17 1.6E-21 173.5 22.6 293 43-399 2-329 (336)
31 2gag_B Heterotetrameric sarcos 99.6 3.3E-15 1.1E-19 163.4 19.2 218 151-417 170-392 (405)
32 3kkj_A Amine oxidase, flavin-c 99.6 3.2E-14 1.1E-18 144.6 16.7 37 43-79 2-38 (336)
33 1ryi_A Glycine oxidase; flavop 99.5 8.5E-14 2.9E-18 151.0 15.4 71 150-247 159-230 (382)
34 1y56_B Sarcosine oxidase; dehy 99.5 2.8E-13 9.5E-18 147.0 16.2 69 151-246 145-215 (382)
35 3dme_A Conserved exported prot 99.4 5.3E-12 1.8E-16 135.6 16.1 72 151-246 146-220 (369)
36 2gf3_A MSOX, monomeric sarcosi 99.4 8.4E-12 2.9E-16 135.4 17.8 173 43-244 3-213 (389)
37 3v76_A Flavoprotein; structura 99.4 3.2E-12 1.1E-16 140.3 13.7 143 39-237 23-187 (417)
38 3nyc_A D-arginine dehydrogenas 99.3 2E-11 6.7E-16 132.0 19.2 69 151-246 150-219 (381)
39 2ywl_A Thioredoxin reductase r 99.3 2.8E-11 9.4E-16 116.8 17.9 118 44-246 2-119 (180)
40 2qcu_A Aerobic glycerol-3-phos 99.3 5E-10 1.7E-14 126.1 28.2 73 151-244 145-219 (501)
41 3dje_A Fructosyl amine: oxygen 99.3 4E-11 1.4E-15 132.6 18.7 62 151-238 157-222 (438)
42 3da1_A Glycerol-3-phosphate de 99.3 9.1E-10 3.1E-14 125.5 30.1 75 151-246 166-242 (561)
43 2i0z_A NAD(FAD)-utilizing dehy 99.3 1.2E-11 4.2E-16 137.2 14.2 166 41-247 24-212 (447)
44 2oln_A NIKD protein; flavoprot 99.3 4.2E-11 1.4E-15 130.5 16.6 175 43-246 4-218 (397)
45 3ps9_A TRNA 5-methylaminomethy 99.3 4.8E-11 1.6E-15 139.4 17.1 70 151-246 413-483 (676)
46 1rp0_A ARA6, thiazole biosynth 99.3 4E-11 1.4E-15 124.8 14.1 143 42-243 38-197 (284)
47 3nlc_A Uncharacterized protein 99.2 3.2E-11 1.1E-15 136.2 13.6 168 41-248 105-292 (549)
48 3pvc_A TRNA 5-methylaminomethy 99.2 7.7E-11 2.6E-15 137.9 15.6 71 151-246 408-479 (689)
49 2gqf_A Hypothetical protein HI 99.2 7.5E-11 2.6E-15 128.9 13.8 142 41-237 2-168 (401)
50 3jsk_A Cypbp37 protein; octame 99.2 1.3E-10 4.4E-15 122.9 14.9 143 42-243 78-257 (344)
51 3nrn_A Uncharacterized protein 99.2 3.6E-10 1.2E-14 124.2 17.3 34 45-78 2-35 (421)
52 3i6d_A Protoporphyrinogen oxid 99.2 2E-10 6.9E-15 127.7 15.3 62 43-105 5-87 (470)
53 3c4n_A Uncharacterized protein 99.1 8.3E-11 2.8E-15 128.8 9.9 174 42-247 35-248 (405)
54 1qo8_A Flavocytochrome C3 fuma 99.1 3.4E-10 1.2E-14 129.4 15.1 162 41-243 119-318 (566)
55 3qj4_A Renalase; FAD/NAD(P)-bi 99.1 4.5E-10 1.5E-14 119.8 14.8 35 44-78 2-39 (342)
56 2cul_A Glucose-inhibited divis 99.1 2E-10 6.8E-15 115.7 11.1 134 42-248 2-136 (232)
57 2uzz_A N-methyl-L-tryptophan o 99.1 7.2E-10 2.5E-14 119.4 16.1 167 43-238 2-205 (372)
58 1y0p_A Fumarate reductase flav 99.1 8.1E-10 2.8E-14 126.4 16.2 160 41-241 124-321 (571)
59 3ka7_A Oxidoreductase; structu 99.1 2.6E-09 8.8E-14 117.3 18.2 35 44-78 1-35 (425)
60 4a9w_A Monooxygenase; baeyer-v 99.1 8.5E-10 2.9E-14 117.6 13.7 131 42-238 2-133 (357)
61 2zbw_A Thioredoxin reductase; 99.0 5.7E-10 2E-14 118.3 11.4 126 41-244 3-128 (335)
62 1chu_A Protein (L-aspartate ox 99.0 1.4E-09 4.9E-14 123.3 15.3 39 39-78 4-42 (540)
63 3ab1_A Ferredoxin--NADP reduct 99.0 8.2E-10 2.8E-14 118.6 12.2 126 41-244 12-138 (360)
64 3itj_A Thioredoxin reductase 1 99.0 6.5E-10 2.2E-14 117.8 10.4 124 41-238 20-143 (338)
65 2gv8_A Monooxygenase; FMO, FAD 99.0 1.3E-09 4.6E-14 120.8 13.1 167 41-239 4-179 (447)
66 3ces_A MNMG, tRNA uridine 5-ca 99.0 2.4E-09 8.2E-14 122.0 15.0 153 42-243 27-187 (651)
67 4at0_A 3-ketosteroid-delta4-5a 99.0 7.2E-09 2.5E-13 116.8 17.6 38 41-78 39-76 (510)
68 1kf6_A Fumarate reductase flav 99.0 4E-09 1.4E-13 121.0 15.7 70 154-244 133-204 (602)
69 2vvm_A Monoamine oxidase N; FA 99.0 6.1E-08 2.1E-12 108.7 24.4 61 43-104 39-114 (495)
70 1vdc_A NTR, NADPH dependent th 99.0 9.4E-10 3.2E-14 116.6 8.9 120 41-238 6-125 (333)
71 3gwf_A Cyclohexanone monooxyge 98.9 2.8E-09 9.6E-14 120.8 12.5 141 41-239 6-149 (540)
72 2zxi_A TRNA uridine 5-carboxym 98.9 6.9E-09 2.3E-13 117.8 15.5 152 42-242 26-185 (637)
73 3axb_A Putative oxidoreductase 98.9 2.1E-09 7.3E-14 119.0 10.9 70 151-246 177-264 (448)
74 2gjc_A Thiazole biosynthetic e 98.9 7.4E-09 2.5E-13 108.8 14.3 143 42-243 64-245 (326)
75 1pj5_A N,N-dimethylglycine oxi 98.9 5.1E-09 1.8E-13 125.1 14.9 71 151-247 147-218 (830)
76 2rgh_A Alpha-glycerophosphate 98.9 1.2E-07 4.1E-12 108.2 25.3 73 152-245 185-259 (571)
77 3k7m_X 6-hydroxy-L-nicotine ox 98.9 1E-07 3.6E-12 104.6 23.7 35 44-78 2-36 (431)
78 3cp8_A TRNA uridine 5-carboxym 98.9 1.1E-08 3.6E-13 116.6 15.7 151 41-240 19-177 (641)
79 1w4x_A Phenylacetone monooxyge 98.9 1.2E-08 4.1E-13 115.9 15.9 142 41-240 14-157 (542)
80 2xve_A Flavin-containing monoo 98.9 9.5E-09 3.3E-13 114.4 13.8 157 44-240 3-169 (464)
81 2bs2_A Quinol-fumarate reducta 98.9 4.4E-08 1.5E-12 113.2 19.5 64 155-239 158-222 (660)
82 3s5w_A L-ornithine 5-monooxyge 98.9 1.2E-08 4.3E-13 113.3 14.2 152 42-237 29-192 (463)
83 3lov_A Protoporphyrinogen oxid 98.9 3.7E-08 1.3E-12 109.8 17.9 62 43-105 4-82 (475)
84 4dgk_A Phytoene dehydrogenase; 98.9 9.3E-08 3.2E-12 107.3 21.3 36 44-79 2-37 (501)
85 2q7v_A Thioredoxin reductase; 98.9 1.2E-08 4.2E-13 107.7 13.1 115 41-237 6-123 (325)
86 3lzw_A Ferredoxin--NADP reduct 98.9 6.8E-09 2.3E-13 109.5 11.1 118 42-238 6-124 (332)
87 2wdq_A Succinate dehydrogenase 98.9 5.3E-08 1.8E-12 111.5 19.1 64 155-239 143-208 (588)
88 1s3e_A Amine oxidase [flavin-c 98.9 1.4E-07 4.7E-12 106.6 22.2 37 42-78 3-39 (520)
89 3f8d_A Thioredoxin reductase ( 98.9 1E-08 3.5E-13 107.6 12.1 112 42-237 14-125 (323)
90 1d4d_A Flavocytochrome C fumar 98.8 3.7E-08 1.3E-12 112.5 17.5 162 41-242 124-322 (572)
91 2q0l_A TRXR, thioredoxin reduc 98.8 1.2E-08 4E-13 106.9 11.9 114 44-239 2-116 (311)
92 4ap3_A Steroid monooxygenase; 98.8 1.6E-08 5.6E-13 114.7 12.8 140 41-238 19-160 (549)
93 3gyx_A Adenylylsulfate reducta 98.8 2.9E-08 1E-12 114.7 14.8 172 40-239 19-235 (662)
94 2h88_A Succinate dehydrogenase 98.8 1.1E-07 3.9E-12 109.1 19.3 169 41-239 16-219 (621)
95 3uox_A Otemo; baeyer-villiger 98.8 2.2E-08 7.5E-13 113.6 13.2 141 41-239 7-149 (545)
96 3fbs_A Oxidoreductase; structu 98.8 3E-08 1E-12 102.7 13.2 112 44-239 3-114 (297)
97 2jae_A L-amino acid oxidase; o 98.8 2.3E-07 7.8E-12 103.8 20.1 40 39-78 7-46 (489)
98 2a87_A TRXR, TR, thioredoxin r 98.8 3.2E-08 1.1E-12 105.0 12.0 115 41-238 12-127 (335)
99 2e5v_A L-aspartate oxidase; ar 98.8 8.2E-08 2.8E-12 107.0 15.7 153 45-242 1-181 (472)
100 3d1c_A Flavin-containing putat 98.7 4.3E-08 1.5E-12 105.2 12.7 140 42-237 3-143 (369)
101 4fk1_A Putative thioredoxin re 98.7 6E-08 2.1E-12 101.5 13.4 38 39-76 2-39 (304)
102 3cty_A Thioredoxin reductase; 98.7 4.1E-08 1.4E-12 103.3 12.1 113 42-238 15-127 (319)
103 1trb_A Thioredoxin reductase; 98.7 4.5E-08 1.5E-12 102.8 12.3 115 41-238 3-117 (320)
104 1c0p_A D-amino acid oxidase; a 98.7 2.1E-08 7.2E-13 107.7 9.7 38 40-77 3-40 (363)
105 4gut_A Lysine-specific histone 98.7 2.8E-08 9.5E-13 116.8 11.1 38 42-79 335-372 (776)
106 1fl2_A Alkyl hydroperoxide red 98.7 6.4E-08 2.2E-12 101.2 11.1 113 43-238 1-116 (310)
107 2a8x_A Dihydrolipoyl dehydroge 98.7 7E-08 2.4E-12 107.4 11.4 144 43-240 3-149 (464)
108 1ojt_A Surface protein; redox- 98.6 7.2E-08 2.5E-12 107.9 10.6 38 41-78 4-41 (482)
109 1jnr_A Adenylylsulfate reducta 98.6 5E-07 1.7E-11 104.5 17.3 38 41-78 20-61 (643)
110 1v59_A Dihydrolipoamide dehydr 98.6 8.9E-08 3E-12 107.0 10.0 37 42-78 4-40 (478)
111 3o0h_A Glutathione reductase; 98.6 4E-07 1.4E-11 101.9 14.7 35 41-75 24-58 (484)
112 2ivd_A PPO, PPOX, protoporphyr 98.6 1.5E-07 5.1E-12 104.9 10.5 63 42-105 15-92 (478)
113 1hyu_A AHPF, alkyl hydroperoxi 98.5 3.1E-07 1.1E-11 103.7 12.3 114 41-237 210-326 (521)
114 4b63_A L-ornithine N5 monooxyg 98.5 7.9E-07 2.7E-11 99.8 15.4 64 151-235 141-212 (501)
115 3urh_A Dihydrolipoyl dehydroge 98.5 8.8E-07 3E-11 99.2 15.4 38 41-78 23-60 (491)
116 3nks_A Protoporphyrinogen oxid 98.5 2.5E-07 8.4E-12 103.1 9.6 35 44-78 3-39 (477)
117 1dxl_A Dihydrolipoamide dehydr 98.4 2.7E-07 9.2E-12 102.8 8.7 37 42-78 5-41 (470)
118 4a5l_A Thioredoxin reductase; 98.4 1.9E-07 6.4E-12 97.8 6.9 34 43-76 4-37 (314)
119 3r9u_A Thioredoxin reductase; 98.4 1.1E-06 3.7E-11 91.7 11.3 111 43-236 4-117 (315)
120 3g3e_A D-amino-acid oxidase; F 98.3 5.2E-08 1.8E-12 104.1 -0.4 33 44-76 1-39 (351)
121 2bc0_A NADH oxidase; flavoprot 98.3 2E-06 6.9E-11 96.3 12.1 37 42-78 34-73 (490)
122 3lad_A Dihydrolipoamide dehydr 98.3 9E-06 3.1E-10 90.6 16.4 36 42-77 2-37 (476)
123 3ics_A Coenzyme A-disulfide re 98.3 2E-06 6.9E-11 98.5 11.1 39 41-79 34-74 (588)
124 3dk9_A Grase, GR, glutathione 98.3 1.2E-05 4.1E-10 89.6 16.7 36 41-76 18-53 (478)
125 1q1r_A Putidaredoxin reductase 98.3 1.5E-06 5.1E-11 95.6 8.9 35 43-77 4-40 (431)
126 3oc4_A Oxidoreductase, pyridin 98.2 3.9E-06 1.3E-10 92.9 11.4 36 44-79 3-40 (452)
127 3iwa_A FAD-dependent pyridine 98.2 3.1E-06 1.1E-10 94.2 10.3 36 43-78 3-40 (472)
128 1mo9_A ORF3; nucleotide bindin 98.2 1.5E-05 5.3E-10 89.8 16.0 37 41-77 41-77 (523)
129 1zmd_A Dihydrolipoyl dehydroge 98.2 2E-06 6.7E-11 95.9 8.6 37 42-78 5-41 (474)
130 1ebd_A E3BD, dihydrolipoamide 98.2 4.8E-06 1.6E-10 92.2 11.3 33 43-75 3-35 (455)
131 3pl8_A Pyranose 2-oxidase; sub 98.2 1.6E-05 5.5E-10 91.4 16.0 39 41-79 44-82 (623)
132 3h8l_A NADH oxidase; membrane 98.2 2.2E-06 7.5E-11 93.5 8.1 33 44-76 2-37 (409)
133 4gcm_A TRXR, thioredoxin reduc 98.2 9.9E-07 3.4E-11 92.3 4.9 37 40-76 3-39 (312)
134 3fpz_A Thiazole biosynthetic e 98.1 1.7E-06 5.7E-11 91.4 6.1 38 41-78 63-102 (326)
135 3dgh_A TRXR-1, thioredoxin red 98.1 2.4E-05 8.1E-10 87.3 15.7 35 41-75 7-41 (483)
136 2qae_A Lipoamide, dihydrolipoy 98.1 2.1E-06 7.3E-11 95.4 7.1 36 43-78 2-37 (468)
137 3klj_A NAD(FAD)-dependent dehy 98.1 5.9E-06 2E-10 89.4 10.4 38 41-78 7-44 (385)
138 3kd9_A Coenzyme A disulfide re 98.1 5.2E-06 1.8E-10 91.8 10.1 36 43-78 3-40 (449)
139 1zk7_A HGII, reductase, mercur 98.1 2E-05 7E-10 87.4 14.9 35 42-76 3-37 (467)
140 2eq6_A Pyruvate dehydrogenase 98.1 1.9E-05 6.6E-10 87.6 14.6 104 44-239 170-273 (464)
141 3l8k_A Dihydrolipoyl dehydroge 98.1 5.5E-06 1.9E-10 92.1 10.1 37 42-78 3-39 (466)
142 3fg2_P Putative rubredoxin red 98.1 7.2E-06 2.5E-10 89.3 10.7 35 44-78 2-38 (404)
143 3lxd_A FAD-dependent pyridine 98.1 5.1E-06 1.8E-10 90.8 9.5 38 41-78 7-46 (415)
144 2cdu_A NADPH oxidase; flavoenz 98.1 5.5E-06 1.9E-10 91.6 9.8 35 44-78 1-37 (452)
145 3qfa_A Thioredoxin reductase 1 98.1 1.5E-05 5.1E-10 89.8 13.3 36 41-76 30-65 (519)
146 3cgb_A Pyridine nucleotide-dis 98.1 5.2E-06 1.8E-10 92.6 9.5 35 44-78 37-73 (480)
147 2yqu_A 2-oxoglutarate dehydrog 98.1 1.7E-05 5.7E-10 87.8 13.3 100 43-239 167-266 (455)
148 1nhp_A NADH peroxidase; oxidor 98.1 1.2E-05 4.2E-10 88.7 12.1 34 45-78 2-37 (447)
149 2v3a_A Rubredoxin reductase; a 98.1 1.6E-05 5.5E-10 85.9 12.3 100 43-238 145-244 (384)
150 3ntd_A FAD-dependent pyridine 98.1 7.2E-06 2.5E-10 93.4 9.8 36 44-79 2-39 (565)
151 2yg5_A Putrescine oxidase; oxi 98.0 5.5E-06 1.9E-10 91.4 7.6 39 41-79 3-41 (453)
152 4gde_A UDP-galactopyranose mut 98.0 2.4E-06 8E-11 95.9 4.6 38 41-78 8-46 (513)
153 2bcg_G Secretory pathway GDP d 98.0 4E-06 1.4E-10 92.8 6.2 38 42-79 10-47 (453)
154 2yqu_A 2-oxoglutarate dehydrog 98.0 7.5E-06 2.6E-10 90.6 8.2 35 44-78 2-36 (455)
155 2hqm_A GR, grase, glutathione 98.0 2.2E-05 7.7E-10 87.4 11.9 36 41-76 9-44 (479)
156 1sez_A Protoporphyrinogen oxid 98.0 6.7E-06 2.3E-10 92.2 7.6 62 42-104 12-88 (504)
157 3sx6_A Sulfide-quinone reducta 98.0 6.1E-06 2.1E-10 90.9 6.6 34 44-77 5-41 (437)
158 3dgz_A Thioredoxin reductase 2 98.0 4.3E-05 1.5E-09 85.4 13.6 36 41-76 4-39 (488)
159 2gqw_A Ferredoxin reductase; f 98.0 9.5E-06 3.3E-10 88.5 7.8 37 42-78 6-44 (408)
160 1xhc_A NADH oxidase /nitrite r 98.0 1.4E-05 4.8E-10 85.9 9.0 34 44-78 9-42 (367)
161 2eq6_A Pyruvate dehydrogenase 98.0 1.9E-05 6.5E-10 87.6 10.3 35 42-76 5-39 (464)
162 1xdi_A RV3303C-LPDA; reductase 98.0 1.4E-05 4.9E-10 89.5 9.2 34 43-76 2-38 (499)
163 1v59_A Dihydrolipoamide dehydr 97.9 8.5E-05 2.9E-09 82.6 15.2 104 43-238 183-288 (478)
164 3ef6_A Toluene 1,2-dioxygenase 97.9 2E-05 6.9E-10 85.9 9.5 35 44-78 3-39 (410)
165 2e1m_A L-glutamate oxidase; L- 97.9 1.4E-05 4.9E-10 85.8 7.3 38 41-78 42-80 (376)
166 3h28_A Sulfide-quinone reducta 97.9 1.7E-05 6E-10 87.0 8.2 35 44-78 3-39 (430)
167 1rsg_A FMS1 protein; FAD bindi 97.9 7E-06 2.4E-10 92.4 4.8 40 39-78 4-44 (516)
168 4eqs_A Coenzyme A disulfide re 97.9 2.9E-05 9.8E-10 85.5 9.6 34 45-78 2-37 (437)
169 2v3a_A Rubredoxin reductase; a 97.9 2.3E-05 7.9E-10 84.6 8.6 35 42-76 3-39 (384)
170 1ebd_A E3BD, dihydrolipoamide 97.8 0.00012 4E-09 81.0 13.4 101 43-237 170-270 (455)
171 1ges_A Glutathione reductase; 97.8 7.6E-05 2.6E-09 82.4 11.9 99 43-238 167-266 (450)
172 1zmd_A Dihydrolipoyl dehydroge 97.8 0.00016 5.6E-09 80.2 14.3 105 43-238 178-283 (474)
173 3s5w_A L-ornithine 5-monooxyge 97.8 0.0002 6.7E-09 79.2 14.8 141 43-236 227-376 (463)
174 2wpf_A Trypanothione reductase 97.8 0.00011 3.9E-09 82.0 12.9 33 42-74 6-39 (495)
175 1y56_A Hypothetical protein PH 97.8 2.5E-05 8.5E-10 87.4 7.3 37 41-78 106-142 (493)
176 2b9w_A Putative aminooxidase; 97.7 2.3E-05 8E-10 85.6 6.2 37 42-78 5-42 (424)
177 1v0j_A UDP-galactopyranose mut 97.7 2E-05 6.8E-10 85.7 5.6 37 42-78 6-43 (399)
178 3hyw_A Sulfide-quinone reducta 97.7 4E-05 1.4E-09 84.1 7.7 33 45-77 4-38 (430)
179 1dxl_A Dihydrolipoamide dehydr 97.7 0.00016 5.4E-09 80.2 12.5 103 43-237 177-279 (470)
180 3hdq_A UDP-galactopyranose mut 97.7 2.5E-05 8.4E-10 84.6 5.6 39 40-78 26-64 (397)
181 4dna_A Probable glutathione re 97.7 2E-05 6.9E-10 87.4 4.7 33 42-74 4-36 (463)
182 2r9z_A Glutathione amide reduc 97.7 0.00019 6.6E-09 79.4 12.4 98 44-237 167-264 (463)
183 1nhp_A NADH peroxidase; oxidor 97.7 0.00019 6.5E-09 79.0 11.8 37 42-78 148-184 (447)
184 1ojt_A Surface protein; redox- 97.6 0.00027 9.1E-09 78.7 12.9 102 43-238 185-287 (482)
185 2iid_A L-amino-acid oxidase; f 97.6 6.7E-05 2.3E-09 83.8 7.8 38 42-79 32-69 (498)
186 4dsg_A UDP-galactopyranose mut 97.6 3.7E-05 1.3E-09 85.7 5.6 38 41-78 7-45 (484)
187 1trb_A Thioredoxin reductase; 97.6 0.00042 1.5E-08 72.1 13.5 100 44-237 146-247 (320)
188 3ic9_A Dihydrolipoamide dehydr 97.6 2.3E-05 7.9E-10 87.6 3.8 35 42-76 7-41 (492)
189 2qae_A Lipoamide, dihydrolipoy 97.6 0.0004 1.4E-08 77.0 13.7 102 43-237 174-276 (468)
190 4b1b_A TRXR, thioredoxin reduc 97.6 0.00021 7.1E-09 80.6 11.5 36 43-78 42-77 (542)
191 1d5t_A Guanine nucleotide diss 97.6 9.5E-05 3.3E-09 81.2 8.2 38 41-78 4-41 (433)
192 2a8x_A Dihydrolipoyl dehydroge 97.6 0.00057 1.9E-08 75.6 14.4 101 43-237 171-271 (464)
193 2hqm_A GR, grase, glutathione 97.6 0.00037 1.3E-08 77.5 13.0 101 43-239 185-287 (479)
194 2bi7_A UDP-galactopyranose mut 97.5 5.1E-05 1.7E-09 82.0 4.8 36 43-78 3-38 (384)
195 2gag_A Heterotetrameric sarcos 97.5 0.00028 9.4E-09 85.3 11.3 37 42-78 127-163 (965)
196 1xdi_A RV3303C-LPDA; reductase 97.5 0.00058 2E-08 76.3 13.2 99 43-238 182-280 (499)
197 3ic9_A Dihydrolipoamide dehydr 97.5 0.00079 2.7E-08 75.1 14.1 101 43-237 174-274 (492)
198 3vrd_B FCCB subunit, flavocyto 97.5 0.00031 1E-08 76.0 10.3 33 45-77 4-38 (401)
199 1i8t_A UDP-galactopyranose mut 97.5 6.3E-05 2.1E-09 80.8 4.6 35 44-78 2-36 (367)
200 3lxd_A FAD-dependent pyridine 97.5 0.00066 2.3E-08 73.9 12.7 99 43-237 152-251 (415)
201 2r9z_A Glutathione amide reduc 97.4 7.4E-05 2.5E-09 82.8 4.9 35 42-76 3-37 (463)
202 1q1r_A Putidaredoxin reductase 97.4 0.0007 2.4E-08 74.1 12.7 99 43-237 149-250 (431)
203 1onf_A GR, grase, glutathione 97.4 0.00064 2.2E-08 76.0 12.4 100 43-238 176-276 (500)
204 3p1w_A Rabgdi protein; GDI RAB 97.4 9.5E-05 3.2E-09 81.7 5.3 38 41-78 18-55 (475)
205 1ges_A Glutathione reductase; 97.4 7.5E-05 2.6E-09 82.5 4.5 35 42-76 3-37 (450)
206 1fec_A Trypanothione reductase 97.4 0.00071 2.4E-08 75.4 12.5 99 43-238 187-289 (490)
207 2vdc_G Glutamate synthase [NAD 97.4 0.0001 3.6E-09 81.4 5.5 37 42-78 121-157 (456)
208 1lvl_A Dihydrolipoamide dehydr 97.4 0.0005 1.7E-08 75.9 11.1 36 43-78 171-206 (458)
209 3ef6_A Toluene 1,2-dioxygenase 97.4 0.00073 2.5E-08 73.5 12.1 99 43-237 143-241 (410)
210 1onf_A GR, grase, glutathione 97.4 9.7E-05 3.3E-09 82.7 5.2 34 43-76 2-35 (500)
211 3g5s_A Methylenetetrahydrofola 97.4 0.00014 4.7E-09 77.4 6.0 34 44-77 2-35 (443)
212 3itj_A Thioredoxin reductase 1 97.4 0.001 3.4E-08 69.6 12.5 36 43-78 173-208 (338)
213 3iwa_A FAD-dependent pyridine 97.4 0.0011 3.7E-08 73.5 13.2 99 43-237 159-258 (472)
214 2cdu_A NADPH oxidase; flavoenz 97.3 0.0011 3.7E-08 73.1 12.5 98 44-237 150-247 (452)
215 2wpf_A Trypanothione reductase 97.3 0.0011 3.7E-08 74.1 12.3 98 43-237 191-292 (495)
216 4b1b_A TRXR, thioredoxin reduc 97.3 0.0014 4.9E-08 73.7 13.3 96 43-236 223-318 (542)
217 2q0l_A TRXR, thioredoxin reduc 97.3 0.0022 7.4E-08 66.4 13.7 35 43-77 143-177 (311)
218 3ntd_A FAD-dependent pyridine 97.3 0.0013 4.5E-08 74.5 12.9 34 44-77 152-185 (565)
219 3k30_A Histamine dehydrogenase 97.3 0.00017 5.7E-09 84.2 5.4 38 41-78 389-426 (690)
220 1lvl_A Dihydrolipoamide dehydr 97.3 0.00018 6E-09 79.7 5.3 34 42-75 4-37 (458)
221 1fl2_A Alkyl hydroperoxide red 97.3 0.0017 6E-08 67.1 12.7 34 44-77 145-178 (310)
222 3dgz_A Thioredoxin reductase 2 97.3 0.0028 9.6E-08 70.5 15.2 101 43-236 185-286 (488)
223 3cgb_A Pyridine nucleotide-dis 97.3 0.0012 4.3E-08 73.2 12.3 35 43-77 186-220 (480)
224 3oc4_A Oxidoreductase, pyridin 97.3 0.0016 5.6E-08 71.6 12.8 96 44-236 148-243 (452)
225 2gqw_A Ferredoxin reductase; f 97.3 0.0014 4.7E-08 71.2 12.1 35 43-77 145-179 (408)
226 3ab1_A Ferredoxin--NADP reduct 97.2 0.0012 4E-08 70.2 11.1 35 44-78 164-198 (360)
227 1m6i_A Programmed cell death p 97.2 0.0018 6E-08 72.3 12.6 98 44-237 181-282 (493)
228 1b37_A Protein (polyamine oxid 97.2 0.00037 1.3E-08 77.3 6.7 37 42-78 3-40 (472)
229 2bc0_A NADH oxidase; flavoprot 97.2 0.0017 5.9E-08 72.3 11.8 36 43-78 194-229 (490)
230 1kdg_A CDH, cellobiose dehydro 97.2 0.00028 9.4E-09 79.9 5.4 38 41-78 5-42 (546)
231 1fec_A Trypanothione reductase 97.1 0.00023 7.7E-09 79.5 4.3 32 43-74 3-35 (490)
232 2zbw_A Thioredoxin reductase; 97.1 0.0034 1.2E-07 65.7 13.2 35 43-77 152-186 (335)
233 3qfa_A Thioredoxin reductase 1 97.1 0.0049 1.7E-07 69.1 15.0 32 44-75 211-242 (519)
234 1o94_A Tmadh, trimethylamine d 97.1 0.00037 1.3E-08 81.7 5.9 37 41-77 387-423 (729)
235 1lqt_A FPRA; NADP+ derivative, 97.1 0.00023 7.8E-09 78.7 3.7 37 42-78 2-45 (456)
236 2x8g_A Thioredoxin glutathione 97.1 0.00031 1.1E-08 80.4 5.0 35 41-75 105-139 (598)
237 3cty_A Thioredoxin reductase; 97.1 0.0035 1.2E-07 65.1 12.7 34 44-77 156-189 (319)
238 1ps9_A 2,4-dienoyl-COA reducta 97.0 0.00047 1.6E-08 80.0 5.3 38 41-78 371-408 (671)
239 1vdc_A NTR, NADPH dependent th 97.0 0.004 1.4E-07 65.0 11.9 36 43-78 159-194 (333)
240 2z3y_A Lysine-specific histone 97.0 0.00055 1.9E-08 79.3 5.6 38 41-78 105-142 (662)
241 2xag_A Lysine-specific histone 97.0 0.0006 2E-08 80.7 5.8 37 42-78 277-313 (852)
242 1xhc_A NADH oxidase /nitrite r 97.0 0.0021 7.3E-08 68.7 9.7 35 44-78 144-178 (367)
243 2q7v_A Thioredoxin reductase; 96.9 0.0064 2.2E-07 63.3 13.0 34 44-77 153-186 (325)
244 3f8d_A Thioredoxin reductase ( 96.9 0.0055 1.9E-07 63.4 12.4 36 43-78 154-189 (323)
245 1m6i_A Programmed cell death p 96.9 0.00047 1.6E-08 77.0 4.3 38 41-78 9-48 (493)
246 4dna_A Probable glutathione re 96.9 0.0025 8.7E-08 70.3 9.8 98 43-237 170-268 (463)
247 3d1c_A Flavin-containing putat 96.9 0.0035 1.2E-07 66.4 10.6 34 44-77 167-200 (369)
248 3r9u_A Thioredoxin reductase; 96.9 0.0069 2.3E-07 62.4 12.5 35 44-78 148-182 (315)
249 3t37_A Probable dehydrogenase; 96.9 0.00059 2E-08 76.7 4.6 38 41-78 15-53 (526)
250 1ju2_A HydroxynitrIle lyase; f 96.8 0.00055 1.9E-08 77.2 4.2 37 41-78 24-60 (536)
251 1cjc_A Protein (adrenodoxin re 96.8 0.00067 2.3E-08 75.0 4.7 36 43-78 6-43 (460)
252 1gte_A Dihydropyrimidine dehyd 96.8 0.00083 2.9E-08 81.7 5.5 37 42-78 186-223 (1025)
253 3ics_A Coenzyme A-disulfide re 96.8 0.0048 1.6E-07 70.3 11.4 105 44-247 188-294 (588)
254 2a87_A TRXR, TR, thioredoxin r 96.7 0.0062 2.1E-07 63.9 10.8 35 43-77 155-189 (335)
255 1gpe_A Protein (glucose oxidas 96.7 0.0012 4.2E-08 75.2 5.6 38 41-78 22-60 (587)
256 3lzw_A Ferredoxin--NADP reduct 96.7 0.0058 2E-07 63.5 10.5 96 43-236 154-249 (332)
257 4g6h_A Rotenone-insensitive NA 96.7 0.0051 1.8E-07 68.6 10.6 59 156-236 273-331 (502)
258 3q9t_A Choline dehydrogenase a 96.7 0.001 3.6E-08 75.4 4.8 37 41-77 4-41 (577)
259 1n4w_A CHOD, cholesterol oxida 96.7 0.001 3.6E-08 74.3 4.6 38 41-78 3-40 (504)
260 3kd9_A Coenzyme A disulfide re 96.6 0.0078 2.7E-07 66.1 11.3 34 44-77 149-182 (449)
261 1coy_A Cholesterol oxidase; ox 96.6 0.0015 5.1E-08 73.2 5.4 38 41-78 9-46 (507)
262 2x8g_A Thioredoxin glutathione 96.6 0.023 7.9E-07 64.8 15.2 32 44-75 287-318 (598)
263 3ayj_A Pro-enzyme of L-phenyla 96.6 0.00098 3.4E-08 76.9 3.5 36 43-78 56-100 (721)
264 4g6h_A Rotenone-insensitive NA 96.5 0.001 3.5E-08 74.3 3.6 37 41-77 40-76 (502)
265 1hyu_A AHPF, alkyl hydroperoxi 96.5 0.013 4.6E-07 65.6 12.7 34 44-77 356-389 (521)
266 2jbv_A Choline oxidase; alcoho 96.5 0.0018 6.3E-08 73.1 5.2 37 42-78 12-49 (546)
267 3l8k_A Dihydrolipoyl dehydroge 96.5 0.012 4E-07 65.0 11.6 36 43-78 172-207 (466)
268 4eqs_A Coenzyme A disulfide re 96.5 0.0076 2.6E-07 66.0 9.9 34 44-77 148-181 (437)
269 3qvp_A Glucose oxidase; oxidor 96.5 0.0016 5.4E-08 73.9 4.5 36 41-76 17-53 (583)
270 1vg0_A RAB proteins geranylger 96.5 0.0028 9.4E-08 72.3 6.4 40 41-80 6-45 (650)
271 3fim_B ARYL-alcohol oxidase; A 96.2 0.0017 6E-08 73.4 3.0 36 43-78 2-38 (566)
272 3gwf_A Cyclohexanone monooxyge 95.9 0.0049 1.7E-07 69.4 4.5 54 43-96 178-231 (540)
273 1cjc_A Protein (adrenodoxin re 95.8 0.05 1.7E-06 59.9 12.5 36 43-78 145-201 (460)
274 3uox_A Otemo; baeyer-villiger 95.7 0.011 3.8E-07 66.6 6.6 55 43-97 185-239 (545)
275 3k30_A Histamine dehydrogenase 95.6 0.033 1.1E-06 64.7 10.4 34 44-77 524-559 (690)
276 3fwz_A Inner membrane protein 95.6 0.012 4.2E-07 53.3 5.3 36 42-77 6-41 (140)
277 2g1u_A Hypothetical protein TM 95.4 0.011 3.6E-07 54.7 4.3 36 43-78 19-54 (155)
278 3klj_A NAD(FAD)-dependent dehy 95.4 0.012 4E-07 63.4 5.1 36 44-79 147-182 (385)
279 1id1_A Putative potassium chan 95.4 0.018 6E-07 53.0 5.5 35 42-76 2-36 (153)
280 3fbs_A Oxidoreductase; structu 95.2 0.04 1.4E-06 56.0 8.1 33 43-76 141-173 (297)
281 1lqt_A FPRA; NADP+ derivative, 95.0 0.091 3.1E-06 57.7 11.0 36 43-78 147-203 (456)
282 3llv_A Exopolyphosphatase-rela 95.0 0.02 6.8E-07 51.8 4.5 33 44-76 7-39 (141)
283 1lss_A TRK system potassium up 94.8 0.022 7.5E-07 51.0 4.4 33 44-76 5-37 (140)
284 2gag_A Heterotetrameric sarcos 94.8 0.069 2.4E-06 64.3 9.9 34 44-77 285-318 (965)
285 1o94_A Tmadh, trimethylamine d 94.5 0.11 3.9E-06 60.5 10.6 33 44-76 529-563 (729)
286 3sx6_A Sulfide-quinone reducta 94.5 0.2 6.7E-06 54.5 11.9 43 190-235 224-267 (437)
287 3ic5_A Putative saccharopine d 94.4 0.028 9.6E-07 48.6 4.0 33 44-76 6-39 (118)
288 1ps9_A 2,4-dienoyl-COA reducta 94.4 0.14 4.8E-06 59.1 11.1 28 43-70 494-521 (671)
289 4gcm_A TRXR, thioredoxin reduc 94.3 0.031 1.1E-06 57.7 4.7 35 44-78 146-180 (312)
290 3c85_A Putative glutathione-re 94.1 0.038 1.3E-06 52.4 4.4 34 43-76 39-73 (183)
291 1gte_A Dihydropyrimidine dehyd 94.0 0.34 1.2E-05 58.7 13.6 33 44-76 333-366 (1025)
292 2hmt_A YUAA protein; RCK, KTN, 93.9 0.049 1.7E-06 48.8 4.5 33 44-76 7-39 (144)
293 4a5l_A Thioredoxin reductase; 93.2 0.055 1.9E-06 55.6 4.2 35 44-78 153-187 (314)
294 3tl2_A Malate dehydrogenase; c 93.2 0.075 2.6E-06 55.2 5.2 38 39-76 4-42 (315)
295 3l4b_C TRKA K+ channel protien 93.1 0.053 1.8E-06 53.0 3.8 33 45-77 2-34 (218)
296 1pzg_A LDH, lactate dehydrogen 93.0 0.086 2.9E-06 55.2 5.3 34 43-76 9-43 (331)
297 3fg2_P Putative rubredoxin red 93.0 0.076 2.6E-06 57.2 5.1 36 44-79 143-178 (404)
298 1zk7_A HGII, reductase, mercur 92.6 0.086 3E-06 57.9 4.9 37 43-79 176-212 (467)
299 4e12_A Diketoreductase; oxidor 92.1 0.13 4.5E-06 52.4 5.2 33 44-76 5-37 (283)
300 3i83_A 2-dehydropantoate 2-red 92.0 0.12 4.2E-06 53.7 4.8 33 44-76 3-35 (320)
301 1f0y_A HCDH, L-3-hydroxyacyl-C 91.9 0.14 4.9E-06 52.7 5.2 32 45-76 17-48 (302)
302 3ghy_A Ketopantoate reductase 91.8 0.15 5.3E-06 53.3 5.4 32 44-75 4-35 (335)
303 3lk7_A UDP-N-acetylmuramoylala 91.8 0.12 4.2E-06 56.6 4.8 35 42-76 8-42 (451)
304 3dfz_A SIRC, precorrin-2 dehyd 91.7 0.17 5.8E-06 49.7 5.2 34 42-75 30-63 (223)
305 3k96_A Glycerol-3-phosphate de 91.6 0.17 5.8E-06 53.6 5.4 34 43-76 29-62 (356)
306 3dk9_A Grase, GR, glutathione 91.2 0.15 5.3E-06 56.1 4.9 37 43-79 187-223 (478)
307 1bg6_A N-(1-D-carboxylethyl)-L 91.2 0.16 5.4E-06 53.5 4.8 33 44-76 5-37 (359)
308 3hn2_A 2-dehydropantoate 2-red 91.2 0.16 5.5E-06 52.6 4.7 32 44-75 3-34 (312)
309 2ewd_A Lactate dehydrogenase,; 91.1 0.18 6E-06 52.5 4.9 33 44-76 5-38 (317)
310 3lad_A Dihydrolipoamide dehydr 91.1 0.17 5.8E-06 55.7 5.1 37 43-79 180-216 (476)
311 3qha_A Putative oxidoreductase 91.0 0.16 5.4E-06 52.2 4.4 36 43-78 15-50 (296)
312 2x5o_A UDP-N-acetylmuramoylala 91.0 0.14 4.7E-06 55.9 4.1 35 44-78 6-40 (439)
313 1y6j_A L-lactate dehydrogenase 90.9 0.2 6.9E-06 52.1 5.1 35 42-76 6-42 (318)
314 1sez_A Protoporphyrinogen oxid 90.9 3.3 0.00011 45.4 15.4 49 189-239 256-310 (504)
315 4dio_A NAD(P) transhydrogenase 90.9 0.2 6.9E-06 53.6 5.2 35 43-77 190-224 (405)
316 3l9w_A Glutathione-regulated p 90.8 0.17 5.7E-06 54.7 4.6 34 44-77 5-38 (413)
317 2dpo_A L-gulonate 3-dehydrogen 90.8 0.17 5.7E-06 52.7 4.4 34 44-77 7-40 (319)
318 3ado_A Lambda-crystallin; L-gu 90.7 0.18 6E-06 52.4 4.4 34 43-76 6-39 (319)
319 2iid_A L-amino-acid oxidase; f 90.7 1.8 6.1E-05 47.5 12.9 44 190-236 254-297 (498)
320 1t2d_A LDH-P, L-lactate dehydr 90.7 0.23 7.7E-06 51.8 5.2 33 44-76 5-38 (322)
321 2hjr_A Malate dehydrogenase; m 90.6 0.23 7.8E-06 51.9 5.2 33 44-76 15-48 (328)
322 1ks9_A KPA reductase;, 2-dehyd 90.5 0.22 7.6E-06 50.5 5.0 33 45-77 2-34 (291)
323 3pqe_A L-LDH, L-lactate dehydr 90.5 0.2 6.9E-06 52.2 4.7 34 42-75 4-39 (326)
324 3h28_A Sulfide-quinone reducta 90.5 0.8 2.7E-05 49.5 9.8 53 158-236 203-255 (430)
325 3p7m_A Malate dehydrogenase; p 90.4 0.25 8.6E-06 51.4 5.2 35 43-77 5-40 (321)
326 4huj_A Uncharacterized protein 90.3 0.14 4.8E-06 50.1 3.1 34 44-77 24-58 (220)
327 2uyy_A N-PAC protein; long-cha 90.3 0.28 9.7E-06 50.7 5.7 35 43-77 30-64 (316)
328 1jw9_B Molybdopterin biosynthe 90.3 0.18 6E-06 50.5 3.9 34 43-76 31-65 (249)
329 4ap3_A Steroid monooxygenase; 90.3 0.26 9E-06 55.3 5.7 55 42-96 190-244 (549)
330 2raf_A Putative dinucleotide-b 90.3 0.27 9.1E-06 47.7 5.1 34 44-77 20-53 (209)
331 3g17_A Similar to 2-dehydropan 90.1 0.19 6.6E-06 51.5 4.1 33 44-76 3-35 (294)
332 1lld_A L-lactate dehydrogenase 90.1 0.23 8E-06 51.4 4.8 33 44-76 8-42 (319)
333 2ew2_A 2-dehydropantoate 2-red 90.1 0.23 7.8E-06 51.1 4.7 32 45-76 5-36 (316)
334 3gg2_A Sugar dehydrogenase, UD 90.1 0.22 7.6E-06 54.4 4.8 33 44-76 3-35 (450)
335 3gvi_A Malate dehydrogenase; N 90.0 0.27 9.1E-06 51.2 5.1 35 43-77 7-42 (324)
336 3urh_A Dihydrolipoyl dehydroge 90.0 0.21 7E-06 55.3 4.5 102 43-236 198-299 (491)
337 2xve_A Flavin-containing monoo 89.9 0.22 7.5E-06 54.7 4.6 35 43-77 197-231 (464)
338 2y0c_A BCEC, UDP-glucose dehyd 89.8 0.24 8.2E-06 54.6 4.8 34 43-76 8-41 (478)
339 3p2y_A Alanine dehydrogenase/p 89.8 0.2 6.9E-06 53.1 3.9 35 43-77 184-218 (381)
340 3g0o_A 3-hydroxyisobutyrate de 89.6 0.27 9.3E-06 50.6 4.8 33 44-76 8-40 (303)
341 4g65_A TRK system potassium up 89.6 0.1 3.4E-06 57.4 1.5 34 44-77 4-37 (461)
342 3l6d_A Putative oxidoreductase 89.6 0.43 1.5E-05 49.2 6.3 34 43-76 9-42 (306)
343 3d0o_A L-LDH 1, L-lactate dehy 89.5 0.26 8.8E-06 51.2 4.5 34 42-75 5-40 (317)
344 2qyt_A 2-dehydropantoate 2-red 89.5 0.19 6.6E-06 51.8 3.5 31 44-74 9-45 (317)
345 1mo9_A ORF3; nucleotide bindin 89.4 0.47 1.6E-05 52.8 6.9 36 44-79 215-250 (523)
346 2gv8_A Monooxygenase; FMO, FAD 89.4 0.28 9.6E-06 53.4 5.0 36 43-78 212-248 (447)
347 4dll_A 2-hydroxy-3-oxopropiona 89.3 0.27 9.3E-06 51.1 4.5 34 44-77 32-65 (320)
348 3oj0_A Glutr, glutamyl-tRNA re 89.2 0.12 4E-06 46.9 1.4 33 44-76 22-54 (144)
349 1kyq_A Met8P, siroheme biosynt 89.1 0.2 6.8E-06 50.8 3.2 34 43-76 13-46 (274)
350 4a7p_A UDP-glucose dehydrogena 89.1 0.32 1.1E-05 53.0 5.0 36 43-78 8-43 (446)
351 1l7d_A Nicotinamide nucleotide 89.0 0.31 1.1E-05 52.0 4.8 35 43-77 172-206 (384)
352 2v6b_A L-LDH, L-lactate dehydr 89.0 0.32 1.1E-05 50.2 4.7 32 45-76 2-35 (304)
353 3doj_A AT3G25530, dehydrogenas 88.9 0.33 1.1E-05 50.2 4.8 34 44-77 22-55 (310)
354 3g79_A NDP-N-acetyl-D-galactos 88.9 0.32 1.1E-05 53.5 4.8 34 44-77 19-54 (478)
355 3qsg_A NAD-binding phosphogluc 88.9 0.36 1.2E-05 50.0 5.0 33 44-76 25-58 (312)
356 1x13_A NAD(P) transhydrogenase 88.9 0.29 9.8E-06 52.7 4.4 35 43-77 172-206 (401)
357 3orq_A N5-carboxyaminoimidazol 88.8 0.45 1.5E-05 50.6 5.9 36 42-77 11-46 (377)
358 3c24_A Putative oxidoreductase 88.7 0.43 1.5E-05 48.5 5.5 33 44-76 12-45 (286)
359 3mog_A Probable 3-hydroxybutyr 88.6 0.4 1.4E-05 52.9 5.5 33 44-76 6-38 (483)
360 1ur5_A Malate dehydrogenase; o 88.6 0.38 1.3E-05 49.7 5.0 33 44-76 3-36 (309)
361 1pjc_A Protein (L-alanine dehy 88.4 0.32 1.1E-05 51.5 4.3 33 44-76 168-200 (361)
362 3ldh_A Lactate dehydrogenase; 88.3 0.48 1.6E-05 49.3 5.5 35 42-76 20-56 (330)
363 3q2o_A Phosphoribosylaminoimid 88.2 0.47 1.6E-05 50.6 5.6 37 41-77 12-48 (389)
364 4gx0_A TRKA domain protein; me 88.1 0.43 1.5E-05 53.7 5.5 57 44-101 349-406 (565)
365 2z3y_A Lysine-specific histone 88.0 6.8 0.00023 44.8 15.6 51 185-236 407-457 (662)
366 2pv7_A T-protein [includes: ch 88.0 0.63 2.2E-05 47.7 6.2 34 44-77 22-56 (298)
367 3ego_A Probable 2-dehydropanto 88.0 0.39 1.3E-05 49.6 4.6 32 44-76 3-34 (307)
368 3eag_A UDP-N-acetylmuramate:L- 88.0 0.36 1.2E-05 50.3 4.4 34 44-77 5-39 (326)
369 2aef_A Calcium-gated potassium 87.9 0.19 6.4E-06 49.6 2.1 34 43-77 9-42 (234)
370 4e21_A 6-phosphogluconate dehy 87.7 0.43 1.5E-05 50.4 4.8 35 42-76 21-55 (358)
371 1guz_A Malate dehydrogenase; o 87.6 0.46 1.6E-05 49.1 4.9 33 45-77 2-36 (310)
372 3ggo_A Prephenate dehydrogenas 87.5 0.52 1.8E-05 48.8 5.3 34 43-76 33-68 (314)
373 3pid_A UDP-glucose 6-dehydroge 87.3 0.36 1.2E-05 52.2 4.0 33 44-77 37-69 (432)
374 3dfu_A Uncharacterized protein 87.3 0.17 5.9E-06 49.9 1.3 32 43-74 6-37 (232)
375 3k6j_A Protein F01G10.3, confi 87.3 0.57 2E-05 51.1 5.5 34 44-77 55-88 (460)
376 1mv8_A GMD, GDP-mannose 6-dehy 87.2 0.38 1.3E-05 52.3 4.2 32 45-76 2-33 (436)
377 3hwr_A 2-dehydropantoate 2-red 87.0 0.47 1.6E-05 49.2 4.6 32 44-76 20-51 (318)
378 2vdc_G Glutamate synthase [NAD 87.0 0.55 1.9E-05 51.3 5.3 36 43-78 264-300 (456)
379 1zcj_A Peroxisomal bifunctiona 86.9 0.57 2E-05 51.3 5.4 34 44-77 38-71 (463)
380 1vpd_A Tartronate semialdehyde 86.8 0.44 1.5E-05 48.7 4.2 33 44-76 6-38 (299)
381 3h8l_A NADH oxidase; membrane 86.7 2 6.7E-05 45.9 9.5 36 359-397 300-335 (409)
382 3h8v_A Ubiquitin-like modifier 86.7 0.5 1.7E-05 48.3 4.5 38 39-76 32-70 (292)
383 1z82_A Glycerol-3-phosphate de 86.6 0.54 1.8E-05 49.0 4.8 35 42-76 13-47 (335)
384 2rcy_A Pyrroline carboxylate r 86.6 0.61 2.1E-05 46.6 5.0 35 44-78 5-43 (262)
385 3pef_A 6-phosphogluconate dehy 86.6 0.5 1.7E-05 48.1 4.5 34 44-77 2-35 (287)
386 2eez_A Alanine dehydrogenase; 86.5 0.49 1.7E-05 50.2 4.5 33 44-76 167-199 (369)
387 3gpi_A NAD-dependent epimerase 86.5 0.7 2.4E-05 46.7 5.5 35 44-78 4-38 (286)
388 3o0h_A Glutathione reductase; 86.4 0.54 1.8E-05 51.8 4.9 98 43-237 191-288 (484)
389 2vns_A Metalloreductase steap3 86.3 0.68 2.3E-05 45.0 5.0 33 44-76 29-61 (215)
390 3vtf_A UDP-glucose 6-dehydroge 86.3 0.62 2.1E-05 50.5 5.1 33 44-76 22-54 (444)
391 1ldn_A L-lactate dehydrogenase 86.3 0.61 2.1E-05 48.3 4.9 33 44-76 7-41 (316)
392 3vku_A L-LDH, L-lactate dehydr 86.2 0.56 1.9E-05 48.8 4.6 34 42-75 8-43 (326)
393 1oju_A MDH, malate dehydrogena 86.0 0.53 1.8E-05 48.2 4.3 32 45-76 2-35 (294)
394 3fi9_A Malate dehydrogenase; s 86.0 0.84 2.9E-05 47.8 5.8 35 42-76 7-44 (343)
395 3d1l_A Putative NADP oxidoredu 86.0 0.7 2.4E-05 46.3 5.1 33 44-76 11-44 (266)
396 2zyd_A 6-phosphogluconate dehy 85.9 0.65 2.2E-05 51.1 5.2 36 41-76 13-48 (480)
397 3dtt_A NADP oxidoreductase; st 85.9 0.6 2E-05 46.4 4.5 36 42-77 18-53 (245)
398 2i6t_A Ubiquitin-conjugating e 85.8 0.57 2E-05 48.2 4.4 33 44-76 15-49 (303)
399 3nep_X Malate dehydrogenase; h 85.8 0.6 2.1E-05 48.3 4.5 33 45-77 2-36 (314)
400 2izz_A Pyrroline-5-carboxylate 85.7 0.71 2.4E-05 47.9 5.1 34 44-77 23-60 (322)
401 3ktd_A Prephenate dehydrogenas 85.7 0.82 2.8E-05 47.9 5.6 33 44-76 9-41 (341)
402 3dgh_A TRXR-1, thioredoxin red 85.7 0.55 1.9E-05 51.7 4.5 100 44-236 188-288 (483)
403 1txg_A Glycerol-3-phosphate de 85.5 0.55 1.9E-05 48.8 4.2 30 45-74 2-31 (335)
404 2vhw_A Alanine dehydrogenase; 85.5 0.6 2.1E-05 49.7 4.5 34 43-76 168-201 (377)
405 1evy_A Glycerol-3-phosphate de 85.3 0.45 1.6E-05 50.3 3.5 32 45-76 17-48 (366)
406 3pdu_A 3-hydroxyisobutyrate de 85.3 0.55 1.9E-05 47.8 4.0 33 45-77 3-35 (287)
407 1ez4_A Lactate dehydrogenase; 85.2 0.68 2.3E-05 48.0 4.6 34 42-75 4-39 (318)
408 4ezb_A Uncharacterized conserv 85.1 0.42 1.4E-05 49.6 3.0 34 44-77 25-59 (317)
409 3cky_A 2-hydroxymethyl glutara 85.1 0.63 2.2E-05 47.5 4.3 33 44-76 5-37 (301)
410 4gwg_A 6-phosphogluconate dehy 85.0 0.87 3E-05 50.0 5.6 34 44-77 5-38 (484)
411 3ond_A Adenosylhomocysteinase; 85.0 0.59 2E-05 51.1 4.2 34 43-76 265-298 (488)
412 3i6i_A Putative leucoanthocyan 84.9 0.82 2.8E-05 47.7 5.2 35 43-77 10-45 (346)
413 1a5z_A L-lactate dehydrogenase 84.8 0.65 2.2E-05 48.2 4.3 32 45-76 2-35 (319)
414 3rui_A Ubiquitin-like modifier 84.8 0.73 2.5E-05 48.0 4.6 36 42-77 33-69 (340)
415 3tri_A Pyrroline-5-carboxylate 84.7 0.96 3.3E-05 45.9 5.4 33 44-76 4-39 (280)
416 1x0v_A GPD-C, GPDH-C, glycerol 84.6 0.45 1.5E-05 49.9 3.0 34 44-77 9-49 (354)
417 3o38_A Short chain dehydrogena 84.6 0.85 2.9E-05 45.5 5.0 34 43-76 22-57 (266)
418 4b63_A L-ornithine N5 monooxyg 84.5 5.7 0.0002 43.7 12.1 35 44-78 247-283 (501)
419 1dlj_A UDP-glucose dehydrogena 84.3 0.6 2.1E-05 50.1 3.9 31 45-76 2-32 (402)
420 2q3e_A UDP-glucose 6-dehydroge 84.2 0.64 2.2E-05 51.0 4.1 34 44-77 6-41 (467)
421 2f1k_A Prephenate dehydrogenas 84.1 0.85 2.9E-05 46.0 4.7 32 45-76 2-33 (279)
422 1zud_1 Adenylyltransferase THI 84.0 0.77 2.6E-05 45.8 4.3 35 42-76 27-62 (251)
423 1zej_A HBD-9, 3-hydroxyacyl-CO 84.0 0.71 2.4E-05 47.3 4.0 34 42-76 11-44 (293)
424 1nyt_A Shikimate 5-dehydrogena 84.0 0.9 3.1E-05 45.9 4.8 33 44-76 120-152 (271)
425 3awd_A GOX2181, putative polyo 83.9 0.93 3.2E-05 44.9 4.9 35 42-76 12-47 (260)
426 3ius_A Uncharacterized conserv 83.9 0.66 2.3E-05 46.7 3.8 33 44-76 6-38 (286)
427 2a9f_A Putative malic enzyme ( 83.9 0.8 2.7E-05 48.5 4.4 36 40-75 185-221 (398)
428 3ce6_A Adenosylhomocysteinase; 83.7 0.72 2.5E-05 50.8 4.2 34 43-76 274-307 (494)
429 4ffl_A PYLC; amino acid, biosy 83.7 0.85 2.9E-05 48.0 4.7 34 45-78 3-36 (363)
430 2o3j_A UDP-glucose 6-dehydroge 83.6 0.69 2.4E-05 50.9 4.1 34 44-77 10-45 (481)
431 4a9w_A Monooxygenase; baeyer-v 83.5 0.7 2.4E-05 47.9 3.9 33 43-76 163-195 (357)
432 1jay_A Coenzyme F420H2:NADP+ o 83.5 0.85 2.9E-05 43.8 4.3 32 45-76 2-34 (212)
433 4e4t_A Phosphoribosylaminoimid 83.5 1.2 4E-05 48.1 5.8 37 41-77 33-69 (419)
434 2egg_A AROE, shikimate 5-dehyd 83.5 0.86 2.9E-05 46.7 4.5 33 44-76 142-175 (297)
435 1hdo_A Biliverdin IX beta redu 83.5 0.93 3.2E-05 42.9 4.5 35 44-78 4-39 (206)
436 2p4q_A 6-phosphogluconate dehy 83.5 1.1 3.8E-05 49.5 5.6 35 43-77 10-44 (497)
437 3gvp_A Adenosylhomocysteinase 83.4 0.79 2.7E-05 49.2 4.2 34 43-76 220-253 (435)
438 1pjq_A CYSG, siroheme synthase 83.4 0.85 2.9E-05 49.9 4.6 33 43-75 12-44 (457)
439 2gf2_A Hibadh, 3-hydroxyisobut 83.2 1 3.4E-05 45.8 4.9 32 45-76 2-33 (296)
440 3uko_A Alcohol dehydrogenase c 83.2 0.98 3.4E-05 47.9 5.0 35 43-77 194-229 (378)
441 3phh_A Shikimate dehydrogenase 83.2 1.1 3.6E-05 45.3 4.9 35 43-77 118-152 (269)
442 3two_A Mannitol dehydrogenase; 83.2 1 3.4E-05 47.2 5.0 35 43-77 177-211 (348)
443 2x6t_A ADP-L-glycero-D-manno-h 82.9 1.1 3.7E-05 46.9 5.1 34 44-77 47-82 (357)
444 2h78_A Hibadh, 3-hydroxyisobut 82.7 0.87 3E-05 46.6 4.2 33 44-76 4-36 (302)
445 2cvz_A Dehydrogenase, 3-hydrox 82.6 1 3.4E-05 45.6 4.6 31 45-76 3-33 (289)
446 1vl6_A Malate oxidoreductase; 82.6 0.96 3.3E-05 47.8 4.4 35 41-75 190-225 (388)
447 3h5n_A MCCB protein; ubiquitin 82.5 0.81 2.8E-05 48.2 3.9 35 42-76 117-152 (353)
448 4aj2_A L-lactate dehydrogenase 82.5 1.2 4E-05 46.5 5.0 34 42-75 18-53 (331)
449 3e8x_A Putative NAD-dependent 82.5 0.98 3.4E-05 44.1 4.3 35 43-77 21-56 (236)
450 2we8_A Xanthine dehydrogenase; 82.5 1.3 4.3E-05 47.2 5.4 37 42-78 203-239 (386)
451 2pgd_A 6-phosphogluconate dehy 82.4 1.2 4.2E-05 48.9 5.5 33 44-76 3-35 (482)
452 2iz1_A 6-phosphogluconate dehy 82.4 1.3 4.3E-05 48.7 5.6 33 44-76 6-38 (474)
453 2g5c_A Prephenate dehydrogenas 82.4 1 3.5E-05 45.4 4.6 32 45-76 3-36 (281)
454 3ew7_A LMO0794 protein; Q8Y8U8 82.3 1.1 3.7E-05 42.9 4.5 32 45-76 2-34 (221)
455 2d4a_B Malate dehydrogenase; a 82.2 1.2 4.1E-05 45.9 5.0 32 45-76 1-33 (308)
456 3vps_A TUNA, NAD-dependent epi 82.1 1.3 4.5E-05 45.1 5.3 34 44-77 8-42 (321)
457 1yj8_A Glycerol-3-phosphate de 82.1 0.97 3.3E-05 47.9 4.4 34 45-78 23-63 (375)
458 1hyh_A L-hicdh, L-2-hydroxyiso 82.0 0.97 3.3E-05 46.5 4.2 32 45-76 3-36 (309)
459 1np3_A Ketol-acid reductoisome 82.0 1.5 5E-05 45.9 5.6 33 44-76 17-49 (338)
460 1b8p_A Protein (malate dehydro 82.0 0.83 2.8E-05 47.6 3.8 33 43-75 5-45 (329)
461 3k5i_A Phosphoribosyl-aminoimi 82.0 1 3.5E-05 48.3 4.6 35 41-76 22-56 (403)
462 3don_A Shikimate dehydrogenase 82.0 0.97 3.3E-05 45.8 4.1 36 43-78 117-153 (277)
463 3i1j_A Oxidoreductase, short c 82.0 1.3 4.3E-05 43.6 5.0 36 41-76 12-48 (247)
464 3gt0_A Pyrroline-5-carboxylate 81.9 1.4 4.9E-05 43.5 5.3 33 44-76 3-39 (247)
465 3d4o_A Dipicolinate synthase s 81.9 1 3.5E-05 46.0 4.3 34 43-76 155-188 (293)
466 1yqg_A Pyrroline-5-carboxylate 81.8 1.1 3.6E-05 44.8 4.3 32 45-76 2-34 (263)
467 3ojo_A CAP5O; rossmann fold, c 81.7 0.79 2.7E-05 49.6 3.5 34 44-77 12-45 (431)
468 1piw_A Hypothetical zinc-type 81.6 1 3.5E-05 47.4 4.3 34 44-77 181-214 (360)
469 2yzh_A Probable thiol peroxida 81.6 14 0.00047 33.6 11.8 133 552-702 21-170 (171)
470 2zqz_A L-LDH, L-lactate dehydr 81.5 1.2 4.1E-05 46.3 4.7 34 42-75 8-43 (326)
471 3gem_A Short chain dehydrogena 81.1 1.2 4.2E-05 44.4 4.6 37 41-77 25-62 (260)
472 3c7a_A Octopine dehydrogenase; 81.0 0.8 2.7E-05 49.1 3.3 30 45-74 4-34 (404)
473 2jsy_A Probable thiol peroxida 80.9 7.7 0.00026 35.1 9.7 136 552-703 18-166 (167)
474 2rir_A Dipicolinate synthase, 80.9 1.2 4E-05 45.7 4.3 34 43-76 157-190 (300)
475 3h2s_A Putative NADH-flavin re 80.7 1.3 4.4E-05 42.6 4.4 32 45-76 2-34 (224)
476 3kcm_A Thioredoxin family prot 80.6 13 0.00043 32.9 10.9 143 553-714 3-153 (154)
477 2hk9_A Shikimate dehydrogenase 80.4 1.3 4.4E-05 44.8 4.4 34 43-76 129-162 (275)
478 1gpj_A Glutamyl-tRNA reductase 80.3 1.2 4.1E-05 47.8 4.4 34 43-76 167-201 (404)
479 2wtb_A MFP2, fatty acid multif 80.3 1.3 4.6E-05 51.2 5.0 34 44-77 313-346 (725)
480 2r6j_A Eugenol synthase 1; phe 80.3 1.5 5.3E-05 44.8 5.1 34 44-77 12-46 (318)
481 1uuf_A YAHK, zinc-type alcohol 80.1 1.2 4E-05 47.2 4.1 33 44-76 196-228 (369)
482 1edz_A 5,10-methylenetetrahydr 80.0 1.2 4.1E-05 46.0 4.0 34 42-75 176-210 (320)
483 3v8b_A Putative dehydrogenase, 80.0 1.4 4.8E-05 44.6 4.6 33 44-76 29-62 (283)
484 3u62_A Shikimate dehydrogenase 80.0 1.6 5.6E-05 43.5 4.9 33 45-77 110-143 (253)
485 2d8a_A PH0655, probable L-thre 80.0 1.6 5.6E-05 45.5 5.2 33 44-76 169-202 (348)
486 3r1i_A Short-chain type dehydr 79.8 1.3 4.6E-05 44.6 4.3 55 20-76 11-66 (276)
487 4gsl_A Ubiquitin-like modifier 79.8 1.4 4.6E-05 49.5 4.6 35 43-77 326-361 (615)
488 2cf5_A Atccad5, CAD, cinnamyl 79.8 1.3 4.4E-05 46.6 4.3 33 44-76 182-214 (357)
489 1pgj_A 6PGDH, 6-PGDH, 6-phosph 79.7 1.6 5.6E-05 47.9 5.3 32 45-76 3-34 (478)
490 2d5c_A AROE, shikimate 5-dehyd 79.6 1.8 6.3E-05 43.2 5.2 32 45-76 118-149 (263)
491 1yqd_A Sinapyl alcohol dehydro 79.5 1.3 4.5E-05 46.7 4.3 33 44-76 189-221 (366)
492 3dhn_A NAD-dependent epimerase 79.4 1.3 4.3E-05 42.9 3.8 35 44-78 5-40 (227)
493 3jyo_A Quinate/shikimate dehyd 79.3 1.9 6.4E-05 43.9 5.2 34 43-76 127-161 (283)
494 3enk_A UDP-glucose 4-epimerase 79.1 1.9 6.6E-05 44.4 5.4 35 44-78 6-41 (341)
495 2dq4_A L-threonine 3-dehydroge 79.0 1.8 6.3E-05 45.0 5.2 34 43-76 165-199 (343)
496 3tnl_A Shikimate dehydrogenase 79.0 1.5 5.2E-05 45.3 4.4 34 43-76 154-188 (315)
497 3sxp_A ADP-L-glycero-D-mannohe 78.8 2.2 7.7E-05 44.5 5.9 36 42-77 9-47 (362)
498 3fpc_A NADP-dependent alcohol 78.7 1.8 6.2E-05 45.2 5.1 33 44-76 168-201 (352)
499 1e3i_A Alcohol dehydrogenase, 78.7 1.5 5.1E-05 46.4 4.4 33 44-76 197-230 (376)
500 3gl3_A Putative thiol:disulfid 78.6 21 0.00072 31.3 11.7 139 552-711 3-149 (152)
No 1
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=100.00 E-value=5.8e-79 Score=697.31 Aligned_cols=524 Identities=30% Similarity=0.433 Sum_probs=425.2
Q ss_pred CCccCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCCCCCCCeeeeChhHHHHHHhhhchHHHHHhcCCCccccceeE
Q 005056 40 NEAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFI 119 (716)
Q Consensus 40 ~~~~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~~~~p~a~~i~~rtmeilr~l~Gl~~~l~~~~~~~~~~~~~~ 119 (716)
++.++||+||||||+||++|+.|+++|++|+||||++.+...+++..++++++++|+++ |+.+++.+.+.+......+.
T Consensus 2 ~~~~~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~~~~~~~~~~~l~~~~~~~l~~l-Gl~~~~~~~~~~~~~~~~~~ 80 (535)
T 3ihg_A 2 NDHEVDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPGLSPYPRAAGQNPRTMELLRIG-GVADEVVRADDIRGTQGDFV 80 (535)
T ss_dssp CCCSEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSSSCCCCCCSCCBCHHHHHHHHHT-TCHHHHHHSCCSSCTTSCCE
T ss_pred CCccCcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCccceECHHHHHHHHHc-CCHHHHHhhCCCccccccee
Confidence 34568999999999999999999999999999999999999999999999999999999 99999999887766554444
Q ss_pred --EeecCCCCceeeccCCCcc---ccccccCCccccccChHHHHHHHHHHHHhcCceeecccccccccccccccceEEeC
Q 005056 120 --YCTSVTGPILGSVDHMQPQ---DFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMG 194 (716)
Q Consensus 120 --~~~~~~g~~l~~~~~~~~~---~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~l~~~~~~~~~v~~g 194 (716)
+.....|..+.+....... .+ ...+|.....++|..|++.|.+.+.+.|+ +|+++
T Consensus 81 ~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~~l~~~L~~~a~~~gv-------------------~i~~~ 140 (535)
T 3ihg_A 81 IRLAESVRGEILRTVSESFDDMVAAT-EPCTPAGWAMLSQDKLEPILLAQARKHGG-------------------AIRFG 140 (535)
T ss_dssp EEEESSSSSCEEEEEESCHHHHHHTT-GGGCSCCCBCCCHHHHHHHHHHHHHHTTC-------------------EEESS
T ss_pred eeEEeccCCceeeecccccccccccc-ccCCCCcccccCHHHHHHHHHHHHHhCCC-------------------EEEeC
Confidence 5566667665532211000 01 11345667789999999999999999887 99999
Q ss_pred cEEEEEEecCC----eEEEEEEeccCCceeeEEEEecEEEecCCCChhhhhhcCCCccccccccceEEEEEecCcccccc
Q 005056 195 HECVSVSATDQ----CINVIASFLKEGKCTERNIQCNILIGTDGAGSTVRKLVGIDLVGEKDLQKLVSVHFLSKDLGDYL 270 (716)
Q Consensus 195 ~~v~~i~~~~~----gv~v~v~~~~~g~~~~~~i~ad~VVgADG~~S~VR~~lgi~~~g~~~~~~~~~i~~~~~~l~~~~ 270 (716)
++|++++++++ +|++++.+ +.+ ..+++|||||+|||++|.||+++|+++.+.......+.+.+.. ++..+.
T Consensus 141 ~~v~~i~~~~~~~~~~v~v~~~~---~~~-~~~i~a~~vV~AdG~~S~vR~~lgi~~~~~~~~~~~~~~~~~~-~~~~~~ 215 (535)
T 3ihg_A 141 TRLLSFRQHDDDAGAGVTARLAG---PDG-EYDLRAGYLVGADGNRSLVRESLGIGRYGHGTLTHMVGVIFDA-DLSGIM 215 (535)
T ss_dssp CEEEEEEEECGGGCSEEEEEEEE---TTE-EEEEEEEEEEECCCTTCHHHHHTTCCEEEEEEEEEEEEEEEEC-CGGGTS
T ss_pred CEEEEEEECCCCccccEEEEEEc---CCC-eEEEEeCEEEECCCCcchHHHHcCCCcCCCCccceEEEEEEec-cChhhc
Confidence 99999999998 98888773 221 3589999999999999999999999998888777777777765 554443
Q ss_pred ccCCCceEEEEEecCceEEEEEecCCCCeEEEEEecCCCC-CCCCCCCHHHHHHHHHHHcCCCCCceeEEeeccceechh
Q 005056 271 LNERPGMLFFIFNTEAIGVLVAHDLKEGEFILQVPFYPPQ-QNLEDFSPEICEKLIFKLVGWELSDIDVIDIKPWVMHAE 349 (716)
Q Consensus 271 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~e~~~~~i~~~~g~~~~~~~i~~~~~w~~~~~ 349 (716)
.......+++++++..+++++.+. .+.|.+.+.+.+.. .....++++.+.+.+++.++.....+++.....|.+...
T Consensus 216 -~~~~~~~~~~~~p~~~~~~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 293 (535)
T 3ihg_A 216 -EPGTTGWYYLHHPEFKGTFGPTDR-PDRHTLFVEYDPDEGERPEDFTPQRCVELIGLALDAPEVKPELVDIQGWEMAAR 293 (535)
T ss_dssp -CTTCCEEEEEECSSCEEEEEECSS-TTEEEEEEEECTTTTCCGGGCCHHHHHHHHHHHHTCSSCCCEEEEEEEEEEEEE
T ss_pred -cCCceEEEEEECCCceEEEEEecC-CCEEEEEEeeCccccCccccCCHHHHHHHHHHHhCCCCCceeEEEeeEeeeeEE
Confidence 234456677788887777776653 35787777655433 345578889999999999987667778888889999999
Q ss_pred hhccceecCCeEEEEccCCccCCCCCCccchhhHhHHHHHHHHHHHHHcCCCchhHHHHHHHHHhHHHHHHHHHHHHHHH
Q 005056 350 VAEKFLCCYNQIILAGDACHRFPPAGGFGMNTGVQDAHNLAWKIASVLKDIAPASILNTYETERKPIAEFNTALSVQNFR 429 (716)
Q Consensus 350 ~a~~~~~~~gRV~LvGDAAH~~~P~gG~G~n~gi~DA~~LawkLa~vl~g~a~~~lL~sY~~eRrp~a~~~~~~s~~~~~ 429 (716)
++++|.. |||||+|||||.|+|++|||||+||+||++|+|+|+.+++|++.+.+|++|++||+|+++.+++.|..+++
T Consensus 294 ~a~~~~~--grv~LvGDAAH~~~P~~GqG~n~ai~DA~~La~~La~~l~g~~~~~lL~~Ye~eR~p~a~~~~~~s~~~~~ 371 (535)
T 3ihg_A 294 IAERWRE--GRVFLAGDAAKVTPPTGGMSGNAAVADGFDLAWKLAAVLQGQAGAGLLDTYEDERKVAAELVVAEALAIYA 371 (535)
T ss_dssp EESCSEE--TTEEECTTTTEECCSTTSCHHHHHHHHHHHHHHHHHHHHTTSSCTTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EECcccc--CCEEEEecccccCCCccCCccccccccHHHHHHHHHHHhcCCCcHHHHHhhHHHHHHHHHHHHHHHHHhhH
Confidence 9999985 99999999999999999999999999999999999999999999999999999999999999999988876
Q ss_pred HhcccccccCCCcchhhhhHHHhhcccCCCCcHHHHHHHHhhHhhhhhhhhhhhcccCCCccchHHHHHHHHHHHcCCcc
Q 005056 430 AAMEVPSALGLDPTIANSVHQLINRVAGSVLPSVLQKALLEGIFKVGRAQLSESLLNESNPLGSSRLAKLRHIFEEGKSL 509 (716)
Q Consensus 430 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~r~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 509 (716)
.++.... .. + ...
T Consensus 372 ~~~~~~~--------~~------------------------------~-----------------------------~~~ 384 (535)
T 3ihg_A 372 QRMAPHM--------AE------------------------------V-----------------------------WDK 384 (535)
T ss_dssp HHTCGGG--------TT------------------------------T-----------------------------SCC
T ss_pred hhccccc--------Cc------------------------------c-----------------------------ccc
Confidence 5421000 00 0 001
Q ss_pred cccccccccCccccCCccccCCCCCCCCCCCCCCCccccccCCCCCCCCCcceeeecccCCCCcceeeeeCCCCCcceEE
Q 005056 510 QLQFPAEDLGFRYLKGALVPDSNCEVGAPEAPTGHRRDFVPSANPGSRLPHMNVRVLSTVRNREIISTLDLVSGDKVEFL 589 (716)
Q Consensus 510 ~~~~~~~~lgy~Y~~~~v~~~~~~~~~~~~~~~~~~~~~~p~~~pG~R~PH~~l~~~~~~~~~~~~st~Dl~~~~~~~f~ 589 (716)
.+++.++++||+|.+++|+.+++.. |. ....|.|+++||+|+||+||.. +++++||+||+|. +||
T Consensus 385 ~~~~~~~~~~~~y~~~~~~~~~~~~------~~-~~~~~~~~~~pG~r~p~~~l~~-----~~~~~~~~dl~g~---~f~ 449 (535)
T 3ihg_A 385 SVGYPETLLGFRYRSSAVLATDDDP------AR-VENPLTPSGRPGFRGPHVLVSR-----HGERLSTVDLFGD---GWT 449 (535)
T ss_dssp CCCHHHHHTSBCCCSTTCCCSCCCC------CS-BCCTTSCCCCTTSBCCCCEEEE-----TTEEEEGGGGCSS---SEE
T ss_pred ccccceeeeCcccCCCceecCCCCC------Cc-ccccCCCCCCCCCcCCCceeec-----CCceeeHHHhcCC---ceE
Confidence 1234467899999999999765421 11 2236899999999999999975 4567999999985 499
Q ss_pred EEEcCCccchHHHHHHHHhhhhcCCceEEEEEcCCCCcchhhhhhccccCCCCccchhhhhhccCCCcchhhhhcccCCc
Q 005056 590 LIIAPVEESYHLARAALKVAEDFKVPTKVCVLWPAGTTNEVEFRSAAELAPWKNYIDVEEVKRSSDSLSWWRICKMTDMG 669 (716)
Q Consensus 590 Ll~~~~~~~~~~~~aa~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~g 669 (716)
||+++++ ..|.+++.++++++|+||+++.|+++ +.|.+ +.|.+.+|+++.|
T Consensus 450 ll~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~d~~--------~~~~~~~~~~~~~ 500 (535)
T 3ihg_A 450 LLAGELG--ADWVAAAEAVSAELGVPVRAYRVGAG-------------------LTDPE--------SAVSERYGIGKAG 500 (535)
T ss_dssp EEECTTC--HHHHHHHHHHHHHHTCCEEEEEBTTT-------------------BBCSS--------CCHHHHHTCTTTC
T ss_pred EEecCCc--cHHHHHHHHHHHhcCCceEEEEeCCc-------------------cccCc--------chHHHHhCCCCCc
Confidence 9998753 57999999999999999999999421 44533 6899999999999
Q ss_pred eEEEcCCceEEEeeCCCCCCChHHHHHHHHHHhhCC
Q 005056 670 AILVRPDDHIAWRSKSGVSGNPKLEMEMAFSAVLGI 705 (716)
Q Consensus 670 avLVRPDg~VaWr~~~~~~~~~~~~l~~~~~~~~~~ 705 (716)
+||||||||||||+.+. ++||.++|.++|++||+|
T Consensus 501 ~~lvRPD~~va~r~~~~-~~~~~~~l~~~~~~~l~~ 535 (535)
T 3ihg_A 501 ASLVRPDGIVAWRTDEA-AADAAQTLEGVLRRVLDR 535 (535)
T ss_dssp EEEECTTSBEEEEESSC-CSSHHHHHHHHHHHHTTC
T ss_pred eEeeCCCceeEEecCCC-CCCHHHHHHHHHHHHhcC
Confidence 99999999999999975 889999999999999986
No 2
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=100.00 E-value=2.8e-68 Score=609.61 Aligned_cols=522 Identities=27% Similarity=0.402 Sum_probs=375.4
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCCCCCCCeeeeChhHHHHHHhhhchHHHHHhcCCCccccceeEE
Q 005056 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIY 120 (716)
Q Consensus 41 ~~~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~~~~p~a~~i~~rtmeilr~l~Gl~~~l~~~~~~~~~~~~~~~ 120 (716)
+.++||+||||||+||++|+.|+++|++|+||||++.+...+++..++++++++|+++ |+.+++.+.+.+........+
T Consensus 24 ~~~~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~~~~~~~~~l~~~~~~~l~~l-Gl~~~~~~~~~~~~~~~~~~~ 102 (549)
T 2r0c_A 24 PIETDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGTITHPRVGTIGPRSMELFRRW-GVAKQIRTAGWPGDHPLDAAW 102 (549)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSCCSSCCCCEECHHHHHHHHHT-TCHHHHHTSSCCTTSBCCEEE
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHc-CChHHHHhhcCCcccccceEE
Confidence 4568999999999999999999999999999999999888999999999999999999 999999988776644333445
Q ss_pred eecCCCCceeeccCCCcccc-ccccCCccccccChHHHHHHHHHHHHhcCceeecccccccccccccccceEEeCcEEEE
Q 005056 121 CTSVTGPILGSVDHMQPQDF-EKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVS 199 (716)
Q Consensus 121 ~~~~~g~~l~~~~~~~~~~~-~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~l~~~~~~~~~v~~g~~v~~ 199 (716)
..+..|..+..++....... ....+|.....++|..|+++|.+.+.+. |+++++|++
T Consensus 103 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~----------------------v~~~~~v~~ 160 (549)
T 2r0c_A 103 VTRVGGHEVYRIPLGTADTRATPEHTPEPDAICPQHWLAPLLAEAVGER----------------------LRTRSRLDS 160 (549)
T ss_dssp ESSBTSCEEEEECCCBTTTSCCCSSCSSCCEECCHHHHHHHHHHHHGGG----------------------EECSEEEEE
T ss_pred eccCCCceeEeecccccccccccCCCCCcccccCHHHHHHHHHHHHHHh----------------------cccCcEEEE
Confidence 55556665544332211100 0012344557899999999999987641 789999999
Q ss_pred EEecCCeEEEEEEeccCCceeeEEEEecEEEecCCCChhhhhhcCCCccccccccceEEEEEecCccccccccCCCceEE
Q 005056 200 VSATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGSTVRKLVGIDLVGEKDLQKLVSVHFLSKDLGDYLLNERPGMLF 279 (716)
Q Consensus 200 i~~~~~gv~v~v~~~~~g~~~~~~i~ad~VVgADG~~S~VR~~lgi~~~g~~~~~~~~~i~~~~~~l~~~~~~~~~~~~~ 279 (716)
+++++++|++++.+..+|+ ..+++|||||+|||++|.||+++|+++.+....+.++.+.+..+++.... ...+...+
T Consensus 161 ~~~~~~~v~v~~~~~~~G~--~~~i~a~~vVgADG~~S~vR~~lg~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 237 (549)
T 2r0c_A 161 FEQRDDHVRATITDLRTGA--TRAVHARYLVACDGASSPTRKALGIDAPPRHRTQVFRNILFRAPELRSLL-GERAALFF 237 (549)
T ss_dssp EEECSSCEEEEEEETTTCC--EEEEEEEEEEECCCTTCHHHHHHTCCCCBSSCCEEEEEEEEECTTHHHHH-GGGCCSEE
T ss_pred EEEeCCEEEEEEEECCCCC--EEEEEeCEEEECCCCCcHHHHHcCCCCCCCcccceEEEEEEECCchHHhc-CCCCceEE
Confidence 9999999988887433353 35799999999999999999999999998877777777777654332222 12234566
Q ss_pred EEEecC-ceEEEEEecCCCCeEEEEEecCCCCCCCCCCCHHHHHHHHHHHcCCCCCceeEEeeccceechhhhccceecC
Q 005056 280 FIFNTE-AIGVLVAHDLKEGEFILQVPFYPPQQNLEDFSPEICEKLIFKLVGWELSDIDVIDIKPWVMHAEVAEKFLCCY 358 (716)
Q Consensus 280 ~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~i~~~~g~~~~~~~i~~~~~w~~~~~~a~~~~~~~ 358 (716)
++++++ ..+++++.+. .+.|.+.++.. . + .++++.+.+.+++.++.. ..+++.....|.+..+++++|+.
T Consensus 238 ~~~~p~~~~~~~~p~~~-~~~~~~~~~~~-~-~---~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~a~~~~~-- 308 (549)
T 2r0c_A 238 FLMLSSSLRFPLRALDG-RGLYRLTVGVD-D-A---SKSTMDSFELVRRAVAFD-TEIEVLSDSEWHLTHRVADSFSA-- 308 (549)
T ss_dssp EEEEETTEEEEEEESSS-SSEEEEEEECS-T-T---CCSCCCHHHHHHHHBCSC-CCCEEEEEEEEEECCEECSCSEE--
T ss_pred EEECCCCcEEEEEEECC-CcEEEEEecCC-C-C---CCCHHHHHHHHHHHhCCC-CceeEEEEecchhHhhhHHhhcC--
Confidence 666776 5556666542 34677665421 1 1 155666788899998863 34677777889998899999984
Q ss_pred CeEEEEccCCccCCCCCCccchhhHhHHHHHHHHHHHHHcCCCchhHHHHHHHHHhHHHHHHHHHHHHHHHHhccccccc
Q 005056 359 NQIILAGDACHRFPPAGGFGMNTGVQDAHNLAWKIASVLKDIAPASILNTYETERKPIAEFNTALSVQNFRAAMEVPSAL 438 (716)
Q Consensus 359 gRV~LvGDAAH~~~P~gG~G~n~gi~DA~~LawkLa~vl~g~a~~~lL~sY~~eRrp~a~~~~~~s~~~~~~~~~~~~~~ 438 (716)
|||||+|||||.|+|++|||||+||+||+||+|||+++++|++.+.+|++|++||+|+++.+++.|..+.+.+......
T Consensus 309 grv~L~GDAAH~~~P~~GqG~n~gi~DA~~La~~La~~l~g~a~~~lL~~Y~~eR~~~a~~~~~~s~~~~~~~~~~~~~- 387 (549)
T 2r0c_A 309 GRVFLTGDAAHTLSPSGGFGMNTGIGSAADLGWKLAATLRGWAGPGLLATYEEERRPVAITSLEEANVNLRRTMDRELP- 387 (549)
T ss_dssp TTEEECGGGTEECCCGGGHHHHHHHHHHHHHHHHHHHHHHTCSCTTTTHHHHHHHHHHHHHHHHC----------CCCC-
T ss_pred CcEEEEccccccCCCccCCccccccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccc-
Confidence 9999999999999999999999999999999999999999998899999999999999999999887766544211000
Q ss_pred CCCcchhhhhHHHhhcccCCCCcHHHHHHHHhhHhhhhhhhhhhhcccCCCccchHHHHHHHHHHHc-CCcccccccccc
Q 005056 439 GLDPTIANSVHQLINRVAGSVLPSVLQKALLEGIFKVGRAQLSESLLNESNPLGSSRLAKLRHIFEE-GKSLQLQFPAED 517 (716)
Q Consensus 439 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~r~~~~~~~~~~~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 517 (716)
+ .+...+|.+...|+.+.+.+.. .....+...+..
T Consensus 388 ---~-----------------------------------------~~~~~~~~~~~~R~~~~~~~~~~~~~~~~~~~~~~ 423 (549)
T 2r0c_A 388 ---P-----------------------------------------GLHDDGPRGERIRAAVAEKLERSGARREFDAPGIH 423 (549)
T ss_dssp ---T-----------------------------------------TTTCCSHHHHHHHHHHHHHHHHTTGGGGGSCHHHH
T ss_pred ---c-----------------------------------------cccccCcchHHHHHHHHHHHHhhcccccccccceE
Confidence 0 0011222333333344444332 111112223457
Q ss_pred cCccccCCccccCCCCCCCCCCCCCCCccccccCCCCCCCCCcceeeecccCCCCcceeeeeCCCCCcceEEEEEcCCcc
Q 005056 518 LGFRYLKGALVPDSNCEVGAPEAPTGHRRDFVPSANPGSRLPHMNVRVLSTVRNREIISTLDLVSGDKVEFLLIIAPVEE 597 (716)
Q Consensus 518 lgy~Y~~~~v~~~~~~~~~~~~~~~~~~~~~~p~~~pG~R~PH~~l~~~~~~~~~~~~st~Dl~~~~~~~f~Ll~~~~~~ 597 (716)
+|++|.+++|+.++.. ++. ...|.|+.+||.|+||+||.+ + +||+||++. +|+||++.+
T Consensus 424 ~~~~Y~~~~l~~~~~~------~~~--~~~~~~~~~~G~r~p~~~l~~------g--~~l~d~~~~---~~~ll~~~~-- 482 (549)
T 2r0c_A 424 FGHTYRSSIVCGEPET------EVA--TGGWRPSARPGARAPHAWLTP------T--TSTLDLFGR---GFVLLSFGT-- 482 (549)
T ss_dssp HCCCCCSTTSCCC-----------------CCCCCCTTSBCCCCBSSS------S--CBGGGGCSS---SEEEEEESC--
T ss_pred eccEeCCccccCCCCC------Ccc--ccccCCCCCCCCcCCCcEeCC------C--cCHHHHcCC---ceEEEEcCC--
Confidence 8999999999833211 111 136889999999999999962 2 699999985 499999864
Q ss_pred chHHHHHHHHhhhhcCCceEEEEEcCCCCcchhhhhhccccCCCCccchhhhhhccCCCcchhhhhcccCCceEEEcCCc
Q 005056 598 SYHLARAALKVAEDFKVPTKVCVLWPAGTTNEVEFRSAAELAPWKNYIDVEEVKRSSDSLSWWRICKMTDMGAILVRPDD 677 (716)
Q Consensus 598 ~~~~~~aa~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~gavLVRPDg 677 (716)
..|..++.++++..|+++.++.++ | ..|. ++++.++|||||||
T Consensus 483 -~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~----------~~~~---~~~~~~~~LvRPDg 525 (549)
T 2r0c_A 483 -TDGVEAVTRAFADRHVPLETVTCH-----------------------A----------PEIH---ALYERAHVLVRPDG 525 (549)
T ss_dssp -CTTHHHHHHHHHHTTCCEEEEEEC-----------------------C----------HHHH---HHHCSSEEEECTTS
T ss_pred -chhHHHHHHHHHHhCCceEEEEec-----------------------c----------chhh---hccCCCEEEECCCC
Confidence 248777777888899999988872 0 2454 45578999999999
Q ss_pred eEEEeeCCCCCCChHHHHHHHHHHhhCC
Q 005056 678 HIAWRSKSGVSGNPKLEMEMAFSAVLGI 705 (716)
Q Consensus 678 ~VaWr~~~~~~~~~~~~l~~~~~~~~~~ 705 (716)
|||||++.. ++++ ..+|.+++|+
T Consensus 526 ~Vaw~~~~~-~~~~----~~~l~~~~~~ 548 (549)
T 2r0c_A 526 HVAWRGDHL-PAEL----GGLVDKVRGA 548 (549)
T ss_dssp BEEEEESSC-CSCH----HHHHHHHTTC
T ss_pred ceEEecCCC-CcCH----HHHHHHHhcc
Confidence 999999854 4554 4467777765
No 3
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=100.00 E-value=2.8e-60 Score=553.35 Aligned_cols=557 Identities=21% Similarity=0.285 Sum_probs=359.9
Q ss_pred CccCCEEEECCCHHHHHHHHHHHh-----CCCCEEEECCCCCCCCCCCeeeeChhHHHHHHhhhchHHHHHhcCCCcccc
Q 005056 41 EAVVPVLIVGAGPVGLVLSILLTK-----LGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLW 115 (716)
Q Consensus 41 ~~~~dVlIVGaGpaGLt~Al~Lar-----~Gi~v~liEr~~~~~~~p~a~~i~~rtmeilr~l~Gl~~~l~~~~~~~~~~ 115 (716)
..++|||||||||+||++|+.|++ +|++|+||||++.+...+++..|+++++|+|+++ |+.+++.+.+.+...+
T Consensus 6 ~~~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~~~~~gra~~l~~~tle~l~~l-Gl~~~l~~~~~~~~~~ 84 (665)
T 1pn0_A 6 ESYCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRSTKVYNGQADGLQCRTLESLKNL-GLADKILSEANDMSTI 84 (665)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSSCCCSCSCCEECHHHHHHHHTT-TCHHHHHTTCBCCCEE
T ss_pred CCCCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCCCCCCCceeEEChHHHHHHHHC-CCHHHHHHhccccceE
Confidence 346899999999999999999999 9999999999998888899999999999999999 9999998877654322
Q ss_pred ceeEEeecCCCCceeeccCCCccccccccCCccccccChHHHHHHHHHHHHhcCceeecccccccccccccccceEEeCc
Q 005056 116 RKFIYCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGH 195 (716)
Q Consensus 116 ~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~l~~~~~~~~~v~~g~ 195 (716)
. .+..+..|......... +.....++.....++|..|+++|.+.+.+.|. .+++|++++
T Consensus 85 ~--~~~~~~~g~i~~~~~~~---~~~~~~~~~~~~~l~q~~le~~L~~~~~~~g~----------------~~v~v~~g~ 143 (665)
T 1pn0_A 85 A--LYNPDENGHIRRTDRIP---DTLPGISRYHQVVLHQGRIERRILDSIAEISD----------------TRIKVERPL 143 (665)
T ss_dssp E--EEEECTTSCEEEEEEEE---SSCTTSCSSCCEECCHHHHHHHHHHHHHHHHT----------------TSSCEECSE
T ss_pred E--EEeCCCCcceEeecccC---cccCCCCCCeeEEeeHHHHHHHHHHHHHhcCC----------------CceEEEeCC
Confidence 1 22222223221100000 00001223345678999999999999998760 002899999
Q ss_pred EEEEEEecC--------CeEEEEEEec---------------------------------------cCCceeeEEEEecE
Q 005056 196 ECVSVSATD--------QCINVIASFL---------------------------------------KEGKCTERNIQCNI 228 (716)
Q Consensus 196 ~v~~i~~~~--------~gv~v~v~~~---------------------------------------~~g~~~~~~i~ad~ 228 (716)
+++++++++ ++|++++... .+|+ .++++|||
T Consensus 144 ~v~~~~~d~~~~~~~~~~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~~~~~~~~~~G~--~~~i~A~~ 221 (665)
T 1pn0_A 144 IPEKMEIDSSKAEDPEAYPVTMTLRYMSEDESTPLQFGHKTENGLFRSNLQTQEEEDANYRLPEGKEAGE--IETVHCKY 221 (665)
T ss_dssp EEEEEEECGGGTTCTTCCCEEEEEEECCGGGSCCCTTCCCCCSSSCCCHHHHHHHHHTSCCCSTTCCTTC--EEEEEEEE
T ss_pred EEEEEEecCcccccCCCCCEEEEEEecccccccccccccccccccccccccccccccccccccccCCCCc--eEEEEeCE
Confidence 999999875 4788887642 1232 35899999
Q ss_pred EEecCCCChhhhhhcCCCccccccccceEEEEEec-CccccccccCCCceEEEEEe-cCceEEEEEecCCCCeEEEEEec
Q 005056 229 LIGTDGAGSTVRKLVGIDLVGEKDLQKLVSVHFLS-KDLGDYLLNERPGMLFFIFN-TEAIGVLVAHDLKEGEFILQVPF 306 (716)
Q Consensus 229 VVgADG~~S~VR~~lgi~~~g~~~~~~~~~i~~~~-~~l~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~ 306 (716)
||||||++|.||+++|+++.|......+..+.... .++. ... ..+++.. +....++++.+ ++.+.+.+.+
T Consensus 222 VVGADG~~S~VR~~lg~~~~g~~~~~~~~v~d~~~~~~~p-----~~~-~~~~~~~~~~g~~~~~P~~--~~~~r~~~~~ 293 (665)
T 1pn0_A 222 VIGCDGGHSWVRRTLGFEMIGEQTDYIWGVLDAVPASNFP-----DIR-SRCAIHSAESGSIMIIPRE--NNLVRFYVQL 293 (665)
T ss_dssp EEECCCTTCHHHHHHTCCCEEEEEEEEEEEEEEEEECCCT-----TTT-SEEEEECSSSCEEEEEECS--TTCEEEEEEE
T ss_pred EEeccCCCCHHHHhcCCCCCCCCccEEEEEEEEEECCCCC-----Ccc-eEEEEEeCCCceEEEEEcC--CCEEEEEEEe
Confidence 99999999999999999988765543332222211 1111 111 1222222 33344444443 3444443332
Q ss_pred CCCC-----CCCCCCCHHHHHHHHHHHcCCCCCceeEE-eeccceechhhhccceecCCeEEEEccCCccCCCCCCccch
Q 005056 307 YPPQ-----QNLEDFSPEICEKLIFKLVGWELSDIDVI-DIKPWVMHAEVAEKFLCCYNQIILAGDACHRFPPAGGFGMN 380 (716)
Q Consensus 307 ~~~~-----~~~~~~~~e~~~~~i~~~~g~~~~~~~i~-~~~~w~~~~~~a~~~~~~~gRV~LvGDAAH~~~P~gG~G~n 380 (716)
.... ......+++.+.+.+++.++.....++.. ....|.+..+++++|+. .|||||+|||||.|+|++|||||
T Consensus 294 ~~~~~~~~~~~~~~~t~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~a~~~~~-~gRV~L~GDAAH~~~P~~GqG~N 372 (665)
T 1pn0_A 294 QARAEKGGRVDRTKFTPEVVIANAKKIFHPYTFDVQQLDWFTAYHIGQRVTEKFSK-DERVFIAGDACHTHSPKAGQGMN 372 (665)
T ss_dssp CC----------CCCCHHHHHHHHHHHHTTSCCEEEEEEEEEEEEEEEEECSCSEE-TTTEEECGGGTEECCSTTCCHHH
T ss_pred CCccccccccCcCCCCHHHHHHHHHHHhCcccCceeeEEEEEeeeccceehhhccc-CCCEEEEECccccCCCcccCCcc
Confidence 2221 12345678888888888887432232221 12334566778899972 39999999999999999999999
Q ss_pred hhHhHHHHHHHHHHHHHcCCCchhHHHHHHHHHhHHHHHHHHHHHHHHHHhcccccccCCCcchhhhhHHHhhcccCCCC
Q 005056 381 TGVQDAHNLAWKIASVLKDIAPASILNTYETERKPIAEFNTALSVQNFRAAMEVPSALGLDPTIANSVHQLINRVAGSVL 460 (716)
Q Consensus 381 ~gi~DA~~LawkLa~vl~g~a~~~lL~sY~~eRrp~a~~~~~~s~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 460 (716)
+||+||+||+|||+.+++|++.+.+|++|++||+|+++.++..+....+.+..-+.....
T Consensus 373 ~gi~DA~nLawkLa~vl~g~a~~~lL~tYe~eR~p~a~~~i~~s~~~~~l~~~~~~~~~~-------------------- 432 (665)
T 1pn0_A 373 TSMMDTYNLGWKLGLVLTGRAKRDILKTYEEERQPFAQALIDFDHQFSRLFSGRPAKDVA-------------------- 432 (665)
T ss_dssp HHHHHHHHHHHHHHHHHTTCBCGGGGHHHHHHHHHHHHHHHHHHHHHHHHHHSCBCSSTT--------------------
T ss_pred hhHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccccc--------------------
Confidence 999999999999999999999999999999999999999998776555443211100000
Q ss_pred cHHHHHHHHhhHhhhhhhhhhhhcccCCCccchHHHHHHHHHHHcCCcccccccccccCccccCCccccCCCCCCCCCCC
Q 005056 461 PSVLQKALLEGIFKVGRAQLSESLLNESNPLGSSRLAKLRHIFEEGKSLQLQFPAEDLGFRYLKGALVPDSNCEVGAPEA 540 (716)
Q Consensus 461 ~~~~~~~~l~~~~~~~r~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lgy~Y~~~~v~~~~~~~~~~~~~ 540 (716)
++.+.. .+.+.+.+.... .| ...++++|.+++++.++..
T Consensus 433 ----------------------------~~~~~~-~~~~~~~~~~~~----~~-~~g~~~~Y~~s~l~~~~~~------- 471 (665)
T 1pn0_A 433 ----------------------------DEMGVS-MDVFKEAFVKGN----EF-ASGTAINYDENLVTDKKSS------- 471 (665)
T ss_dssp ----------------------------CTTSBC-HHHHHHHHHHHH----HH-HTTCCCCCCSBTTBCSTTC-------
T ss_pred ----------------------------cccchh-HHHHHHHHHHhh----cc-ccccCcccCCCcccCCCcc-------
Confidence 000000 011111111100 01 1238899999998854211
Q ss_pred CCCCccccccCCCCCCCCCcceeeecccCCCCcceeeeeCCCCCcceEEEEEcCCcc-chHHHHHHHHhhhhcC------
Q 005056 541 PTGHRRDFVPSANPGSRLPHMNVRVLSTVRNREIISTLDLVSGDKVEFLLIIAPVEE-SYHLARAALKVAEDFK------ 613 (716)
Q Consensus 541 ~~~~~~~~~p~~~pG~R~PH~~l~~~~~~~~~~~~st~Dl~~~~~~~f~Ll~~~~~~-~~~~~~aa~~~a~~~g------ 613 (716)
...+.++.+||.|+||+||... .++..++|+|+++.+ ..|+||++.+.. ...|..++.++++.++
T Consensus 472 ----~~~~~~~~~~G~r~p~~~~~~~---~~g~~~~l~~~l~~~-g~~~ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 543 (665)
T 1pn0_A 472 ----KQELAKNCVVGTRFKSQPVVRH---SEGLWMHFGDRLVTD-GRFRIIVFAGKATDATQMSRIKKFAAYLDSENSVI 543 (665)
T ss_dssp ----CGGGBTTSCTTSBCCCCEEEET---TTTEEEEGGGGCCCS-SCEEEEEEEECTTSHHHHHHHHHHHHHHHSTTSHH
T ss_pred ----ccccCCCCCCcCCCCCCeEEec---CCCcEEEHhHhhccC-CCEEEEEecCCcccchhHHHHHHHHHHhhccccHH
Confidence 1235677899999999999752 145678999999632 248888875321 1348888877777653
Q ss_pred -----------CceEEEEEcCCCCcchhhhhhcc--ccC----CCCccchhhhhhccCCCcchhhhhcccC-Cce-EEEc
Q 005056 614 -----------VPTKVCVLWPAGTTNEVEFRSAA--ELA----PWKNYIDVEEVKRSSDSLSWWRICKMTD-MGA-ILVR 674 (716)
Q Consensus 614 -----------~~~~~~~~~~~~~~~~~~~~~~~--~~~----~~~~~~d~~~~~~~~~~~~~~~~~~~~~-~ga-vLVR 674 (716)
..++++.|.+.... +.+-.... .+. .++.|.|... . ....+.|++.+|+.+ .|+ ||||
T Consensus 544 ~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~p~~~~~~~~~~~~~~~d~~~-~-~~~~~~~~~~~g~~~~~g~~vlvR 620 (665)
T 1pn0_A 544 SRYTPKGADRNSRIDVITIHSCHRD-DIEMHDFPAPALHPKWQYDFIYADCDS-W-HHPHPKSYQAWGVDETKGAVVVVR 620 (665)
T ss_dssp HHHSBTTSCTTSSEEEEEEESSCTT-SCCGGGSCTTTTSCTTCCSSEEECSCC-S-SSCCCCHHHHHTBCTTTCEEEEEC
T ss_pred hhcCCcccCccceeEEEEEecCCCC-ccchhhCCHHHcCcccchheEeecCcc-c-ccccccHHHHcCCCCCCceEEEEC
Confidence 35888888433111 00000000 111 1223444110 0 001257999999997 566 8999
Q ss_pred CCceEEEeeCCCCCCChHHHHHHHHHHhhCCC
Q 005056 675 PDDHIAWRSKSGVSGNPKLEMEMAFSAVLGIK 706 (716)
Q Consensus 675 PDg~VaWr~~~~~~~~~~~~l~~~~~~~~~~~ 706 (716)
||||||||+. . +...+|...|..++...
T Consensus 621 PD~yV~~~~~---~-~~~~~l~~~~~~~~~~~ 648 (665)
T 1pn0_A 621 PDGYTSLVTD---L-EGTAEIDRYFSGILVEP 648 (665)
T ss_dssp TTSBEEEEEC---T-TTHHHHHHHHHTTBCCC
T ss_pred CCCcEEEEec---c-ccHHHHHHHHHHHhcCc
Confidence 9999999986 2 33578999999988653
No 4
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=100.00 E-value=5.4e-60 Score=534.52 Aligned_cols=488 Identities=20% Similarity=0.264 Sum_probs=332.3
Q ss_pred CCCccCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCCCCCCCeeeeChhHHHHHHhhhchHHHHHhcCCCcccccee
Q 005056 39 SNEAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKF 118 (716)
Q Consensus 39 ~~~~~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~~~~p~a~~i~~rtmeilr~l~Gl~~~l~~~~~~~~~~~~~ 118 (716)
++++++||+||||||+||++|+.|+++|++|+||||++.+...+++..++++++++|+++ |+.+++.+. .+. ...
T Consensus 7 ~~~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~l-Gl~~~~~~~-~~~---~~~ 81 (500)
T 2qa1_A 7 HHRSDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVERTGESRGLGFTARTMEVFDQR-GILPRFGEV-ETS---TQG 81 (500)
T ss_dssp -CCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC-CCCCCSEEECHHHHHHHHTT-TCGGGGCSC-CBC---CEE
T ss_pred CccCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCCcceECHHHHHHHHHC-CCHHHHHhc-ccc---ccc
Confidence 346679999999999999999999999999999999999888899999999999999999 998887654 221 111
Q ss_pred EEeecCCCCceeeccCCCccccccccCCc-cccccChHHHHHHHHHHHHhcCceeecccccccccccccccceEEeCcEE
Q 005056 119 IYCTSVTGPILGSVDHMQPQDFEKVVSPV-SVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHEC 197 (716)
Q Consensus 119 ~~~~~~~g~~l~~~~~~~~~~~~~~~~p~-~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~l~~~~~~~~~v~~g~~v 197 (716)
.+ .+..+ +.. .. ..+. ....++|..|+++|.+.+.+.|+ +|+++++|
T Consensus 82 ~~----~~~~~---~~~---~~---~~~~~~~~~i~~~~l~~~L~~~~~~~gv-------------------~v~~~~~v 129 (500)
T 2qa1_A 82 HF----GGLPI---DFG---VL---EGAWQAAKTVPQSVTETHLEQWATGLGA-------------------DIRRGHEV 129 (500)
T ss_dssp EE----TTEEE---EGG---GS---TTGGGCEEEEEHHHHHHHHHHHHHHTTC-------------------EEEETCEE
T ss_pred cc----cceec---ccc---cC---CCCCCceeecCHHHHHHHHHHHHHHCCC-------------------EEECCcEE
Confidence 11 11111 100 00 1111 23578999999999999998887 99999999
Q ss_pred EEEEecCCeEEEEEEeccCCceeeEEEEecEEEecCCCChhhhhhcCCCccccccccceEEEEEecCccccccccCCCce
Q 005056 198 VSVSATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGSTVRKLVGIDLVGEKDLQKLVSVHFLSKDLGDYLLNERPGM 277 (716)
Q Consensus 198 ~~i~~~~~gv~v~v~~~~~g~~~~~~i~ad~VVgADG~~S~VR~~lgi~~~g~~~~~~~~~i~~~~~~l~~~~~~~~~~~ 277 (716)
+++++++++|++++.+ +++ +++++|||||+|||++|.||+++|+++.+......++...+...+ .+..
T Consensus 130 ~~i~~~~~~v~v~~~~---~~g-~~~~~a~~vVgADG~~S~VR~~lg~~~~~~~~~~~~~~~~~~~~~--------~~~~ 197 (500)
T 2qa1_A 130 LSLTDDGAGVTVEVRG---PEG-KHTLRAAYLVGCDGGRSSVRKAAGFDFPGTAATMEMYLADIKGVE--------LQPR 197 (500)
T ss_dssp EEEEEETTEEEEEEEE---TTE-EEEEEESEEEECCCTTCHHHHHTTCCCCEECCCCEEEEEEEESCC--------CCCE
T ss_pred EEEEEcCCeEEEEEEc---CCC-CEEEEeCEEEECCCcchHHHHHcCCCcCCCccceEEEEEEEEeCC--------CCCc
Confidence 9999999999888763 322 357999999999999999999999998887665555555443221 1222
Q ss_pred EEEEEecCceEEEEEecCCCCeEEEEEecCCC--CCCCCCCCHHHHHHHHHHHcCCCCCceeEEeeccceechhhhccce
Q 005056 278 LFFIFNTEAIGVLVAHDLKEGEFILQVPFYPP--QQNLEDFSPEICEKLIFKLVGWELSDIDVIDIKPWVMHAEVAEKFL 355 (716)
Q Consensus 278 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~e~~~~~i~~~~g~~~~~~~i~~~~~w~~~~~~a~~~~ 355 (716)
.++.+.++...++++.+ ++.+.+.+..... .......+.+.+.+.+++.++......++.....|....+++++|+
T Consensus 198 ~~~~~~~~g~~~~~p~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 275 (500)
T 2qa1_A 198 MIGETLPGGMVMVGPLP--GGITRIIVCERGTPPQRRETPPSWHEVADAWKRLTGDDIAHAEPVWVSAFGNATRQVTEYR 275 (500)
T ss_dssp EEEEEETTEEEEEEEET--TTEEEEEEEETTCCC-----CCCHHHHHHHHHHHHSCCCTTSEEEEEEEEECCEEECSCSE
T ss_pred eEEEECCCcEEEEEEcC--CCEEEEEEEcCCCCCccccCCCCHHHHHHHHHHhcCCCCCccceeEEEEeccCcEEccccc
Confidence 34556666554555543 3555554432221 1122456788888899988875433234444456777788899998
Q ss_pred ecCCeEEEEccCCccCCCCCCccchhhHhHHHHHHHHHHHHHcCCCchhHHHHHHHHHhHHHHHHHHHHHHHHHHhcccc
Q 005056 356 CCYNQIILAGDACHRFPPAGGFGMNTGVQDAHNLAWKIASVLKDIAPASILNTYETERKPIAEFNTALSVQNFRAAMEVP 435 (716)
Q Consensus 356 ~~~gRV~LvGDAAH~~~P~gG~G~n~gi~DA~~LawkLa~vl~g~a~~~lL~sY~~eRrp~a~~~~~~s~~~~~~~~~~~ 435 (716)
. |||||+|||||.|+|++|||||+||+||+||+|||+++++|++.+.+|++|++||+|+++.++..+......+..
T Consensus 276 ~--grv~L~GDAAH~~~P~~GqG~n~gi~DA~~La~~La~~~~g~~~~~~L~~Y~~eR~~~~~~~~~~s~~~~~l~~~-- 351 (500)
T 2qa1_A 276 R--GRVILAGDSAHIHLPAGGQGMNTSIQDAVNLGWKLGAVVNGTATEELLDSYHSERHAVGKRLLMNTQAQGLLFLS-- 351 (500)
T ss_dssp E--TTEEECGGGTEECCCCSSCHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--
T ss_pred c--CCEEEEEccccCCCCccccchhhhHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--
Confidence 4 999999999999999999999999999999999999999999899999999999999999999887655443321
Q ss_pred cccCCCcchhhhhHHHhhcccCCCCcHHHHHHHHhhHhhhhhhhhhhhcccCCCccchHHHHHHHHHHHcCCcccccccc
Q 005056 436 SALGLDPTIANSVHQLINRVAGSVLPSVLQKALLEGIFKVGRAQLSESLLNESNPLGSSRLAKLRHIFEEGKSLQLQFPA 515 (716)
Q Consensus 436 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~r~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 515 (716)
.+. .. .++..++. + + ..|.. +..+...+
T Consensus 352 -----~~~-~~----------------~~R~~~~~-~-----------~---~~~~~---~~~~~~~~------------ 379 (500)
T 2qa1_A 352 -----GPE-VQ----------------PLRDVLTE-L-----------I---QYGEV---ARHLAGMV------------ 379 (500)
T ss_dssp -----CGG-GH----------------HHHHHHHH-H-----------H---TSHHH---HHHHHHHH------------
T ss_pred -----Cch-HH----------------HHHHHHHH-h-----------h---cCHHH---HHHHhhhh------------
Confidence 000 00 01110100 0 0 01100 01111111
Q ss_pred cccCccccCCccccCCCCCCCCCCCCCCCccccccCCCCCCCCCcceeeecccCCCCcceeeeeCCCCCcceEEEEEcCC
Q 005056 516 EDLGFRYLKGALVPDSNCEVGAPEAPTGHRRDFVPSANPGSRLPHMNVRVLSTVRNREIISTLDLVSGDKVEFLLIIAPV 595 (716)
Q Consensus 516 ~~lgy~Y~~~~v~~~~~~~~~~~~~~~~~~~~~~p~~~pG~R~PH~~l~~~~~~~~~~~~st~Dl~~~~~~~f~Ll~~~~ 595 (716)
..++++|.++. . +...||.|+||+||.. .+..+||+||++.+ .|+||++.+
T Consensus 380 ~g~~~~Y~~~~----~------------------~~~~~G~r~p~~~l~~-----~~~~~~l~d~~~~~--~~~ll~~~~ 430 (500)
T 2qa1_A 380 SGLEITYDVGT----G------------------SHPLLGKRMPALELTT-----ATRETSSTELLHTA--RGVLLDLAD 430 (500)
T ss_dssp HSTTCCCCCCC----C------------------SCTTTTSBCCCCEEEC-----SSCEEEHHHHTTTC--CEEEEETTC
T ss_pred ccCCCccCCCC----C------------------cCCcCCCCCCCCeeec-----CCCcEeHHHHhCCC--eEEEEEeCC
Confidence 12678897531 0 0125899999999974 22358999999754 499999864
Q ss_pred ccchHHHHHHHHhhhhcCCceEEEEEcCCCCcchhhhhhccccCCCCccchhhhhhccCCCcchhhhhcccCCceEEEcC
Q 005056 596 EESYHLARAALKVAEDFKVPTKVCVLWPAGTTNEVEFRSAAELAPWKNYIDVEEVKRSSDSLSWWRICKMTDMGAILVRP 675 (716)
Q Consensus 596 ~~~~~~~~aa~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~gavLVRP 675 (716)
. ..|..+ +....-.++++... ..+ ...| +++.+.++|||||
T Consensus 431 ~--~~~~~~----~~~~~~~~~~~~~~---------------------~~~---------~~~~---~~~~~~~~~LvRP 471 (500)
T 2qa1_A 431 N--PRLRAR----AAAWSDRVDIVTAV---------------------PGE---------VSAT---SGLRDTTAVLIRP 471 (500)
T ss_dssp C--HHHHHH----HGGGTTTEEEEECE---------------------ECC---------CCTT---SSCTTCCEEEECT
T ss_pred c--ccchhh----hhccccceEEecCc---------------------ccc---------cccc---cccCCCcEEEECC
Confidence 2 234321 11221223332220 000 0123 3567789999999
Q ss_pred CceEEEeeCCCCCCChHHHHHHHHHHhhCCC
Q 005056 676 DDHIAWRSKSGVSGNPKLEMEMAFSAVLGIK 706 (716)
Q Consensus 676 Dg~VaWr~~~~~~~~~~~~l~~~~~~~~~~~ 706 (716)
|||||||++.. . ..|.++|.+++|..
T Consensus 472 Dg~vaw~~~~~--~---~~l~~~l~~~~~~~ 497 (500)
T 2qa1_A 472 DGHVAWAAPGS--H---HDLPMALERWFGAP 497 (500)
T ss_dssp TSBEEEEESSC--S---SCHHHHHHHHHCSC
T ss_pred CcEEEEEeCCc--h---HHHHHHHHHHhCCC
Confidence 99999998742 2 35899999999975
No 5
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=100.00 E-value=8.9e-60 Score=532.63 Aligned_cols=486 Identities=22% Similarity=0.256 Sum_probs=332.5
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCCCCCCCeeeeChhHHHHHHhhhchHHHHHhcCCCccccceeEE
Q 005056 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIY 120 (716)
Q Consensus 41 ~~~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~~~~p~a~~i~~rtmeilr~l~Gl~~~l~~~~~~~~~~~~~~~ 120 (716)
.+++||+||||||+||++|+.|+++|++|+||||++.+...+++..++++++++|+++ |+.+++.+. .+. ....+
T Consensus 10 ~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~l-Gl~~~~~~~-~~~---~~~~~ 84 (499)
T 2qa2_A 10 RSDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQRTGESRGLGFTARTMEVFDQR-GILPAFGPV-ETS---TQGHF 84 (499)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSCCCCCCSEEECHHHHHHHHHT-TCGGGGCSC-CEE---SEEEE
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCceeEECHHHHHHHHHC-CCHHHHHhc-ccc---cccee
Confidence 4568999999999999999999999999999999999888899999999999999999 998887654 221 11111
Q ss_pred eecCCCCceeeccCCCccccccccCCc-cccccChHHHHHHHHHHHHhcCceeecccccccccccccccceEEeCcEEEE
Q 005056 121 CTSVTGPILGSVDHMQPQDFEKVVSPV-SVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVS 199 (716)
Q Consensus 121 ~~~~~g~~l~~~~~~~~~~~~~~~~p~-~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~l~~~~~~~~~v~~g~~v~~ 199 (716)
.+..+ +. .....+. ....++|..|+++|.+.+.+.|+ +|+++++|++
T Consensus 85 ----~~~~~---~~------~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv-------------------~v~~~~~v~~ 132 (499)
T 2qa2_A 85 ----GGRPV---DF------GVLEGAHYGVKAVPQSTTESVLEEWALGRGA-------------------ELLRGHTVRA 132 (499)
T ss_dssp ----TTEEE---EG------GGSTTCCCEEEEEEHHHHHHHHHHHHHHTTC-------------------EEEESCEEEE
T ss_pred ----cceec---cc------ccCCCCCCceEecCHHHHHHHHHHHHHhCCC-------------------EEEcCCEEEE
Confidence 11111 10 0001111 23678999999999999998887 9999999999
Q ss_pred EEecCCeEEEEEEeccCCceeeEEEEecEEEecCCCChhhhhhcCCCccccccccceEEEEEecCccccccccCCCceEE
Q 005056 200 VSATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGSTVRKLVGIDLVGEKDLQKLVSVHFLSKDLGDYLLNERPGMLF 279 (716)
Q Consensus 200 i~~~~~gv~v~v~~~~~g~~~~~~i~ad~VVgADG~~S~VR~~lgi~~~g~~~~~~~~~i~~~~~~l~~~~~~~~~~~~~ 279 (716)
+++++++|++++. ++++ +++++|||||+|||++|.||+++|+++.+......++...+...+ .+...+
T Consensus 133 i~~~~~~v~v~~~---~~~g-~~~~~a~~vVgADG~~S~VR~~lg~~~~~~~~~~~~~~~~v~~~~--------~~~~~~ 200 (499)
T 2qa2_A 133 LTDEGDHVVVEVE---GPDG-PRSLTTRYVVGCDGGRSTVRKAAGFDFPGTSASREMFLADIRGCE--------ITPRPI 200 (499)
T ss_dssp EEECSSCEEEEEE---CSSC-EEEEEEEEEEECCCTTCHHHHHTTCCCCEECCCCCEEEEEEESCC--------CCCEEE
T ss_pred EEEeCCEEEEEEE---cCCC-cEEEEeCEEEEccCcccHHHHHcCCCCCCCCCccEEEEEEEEECC--------CCcceE
Confidence 9999999988876 2322 357999999999999999999999998887665555555443321 122234
Q ss_pred EEEecCceEEEEEecCCCCeEEEEEecCCC--CCCCCCCCHHHHHHHHHHHcCCCCCceeEEeeccceechhhhccceec
Q 005056 280 FIFNTEAIGVLVAHDLKEGEFILQVPFYPP--QQNLEDFSPEICEKLIFKLVGWELSDIDVIDIKPWVMHAEVAEKFLCC 357 (716)
Q Consensus 280 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~e~~~~~i~~~~g~~~~~~~i~~~~~w~~~~~~a~~~~~~ 357 (716)
+.+.++...++++. .++.|.+.+..... .......+.+.+.+.+++.++......++.....|....+++++|+.
T Consensus 201 ~~~~~~g~~~~~P~--~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~- 277 (499)
T 2qa2_A 201 GETVPLGMVMSAPL--GDGVDRIIVCERGAPARRRTGPPPYQEVAAAWQRLTGQDISHGEPVWVSAFGDPARQVSAYRR- 277 (499)
T ss_dssp EEEETTEEEEEEEC--SSSCEEEEEEETTCCCCCCSSSCCHHHHHHHHHHHHSCCCTTCEEEEEEEECCCEEECSCSEE-
T ss_pred EEECCCeEEEEEEc--CCCEEEEEEEecCCCCccccCCCCHHHHHHHHHHHhCCCCCccceeEEEEEeCCcEEcccccC-
Confidence 55666654444444 34555444332221 12234567888888999888754332344444567777788999984
Q ss_pred CCeEEEEccCCccCCCCCCccchhhHhHHHHHHHHHHHHHcCCCchhHHHHHHHHHhHHHHHHHHHHHHHHHHhcccccc
Q 005056 358 YNQIILAGDACHRFPPAGGFGMNTGVQDAHNLAWKIASVLKDIAPASILNTYETERKPIAEFNTALSVQNFRAAMEVPSA 437 (716)
Q Consensus 358 ~gRV~LvGDAAH~~~P~gG~G~n~gi~DA~~LawkLa~vl~g~a~~~lL~sY~~eRrp~a~~~~~~s~~~~~~~~~~~~~ 437 (716)
|||||+|||||.|+|++|||||+||+||+||+|||+++++|++.+.+|++|++||+|+++.++..+..+...+..
T Consensus 278 -grv~L~GDAAH~~~P~~GqG~n~gi~DA~~La~~La~~l~g~~~~~~L~~Ye~eR~~~~~~~~~~s~~~~~l~~~---- 352 (499)
T 2qa2_A 278 -GRVLLAGDSAHVHLPAGGQGMNVSVQDSVNLGWKLAAVVSGRAPAGLLDTYHEERHPVGRRLLMNTQAQGMLFLS---- 352 (499)
T ss_dssp -TTEEECGGGTEEECCCSSCHHHHHHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC----
T ss_pred -CCEEEEecccccCCCccccchhhhHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC----
Confidence 999999999999999999999999999999999999999999889999999999999999999887655443321
Q ss_pred cCCCcchhhhhHHHhhcccCCCCcHHHHHHHHhhHhhhhhhhhhhhcccCCCccchHHHHHHHHHHHcCCcccccccccc
Q 005056 438 LGLDPTIANSVHQLINRVAGSVLPSVLQKALLEGIFKVGRAQLSESLLNESNPLGSSRLAKLRHIFEEGKSLQLQFPAED 517 (716)
Q Consensus 438 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~r~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 517 (716)
.+. .. .++..++. .+ ..|... ..+...+ ..
T Consensus 353 ---~~~-~~----------------~~R~~~~~------------~~---~~~~~~---~~~~~~~------------~~ 382 (499)
T 2qa2_A 353 ---GDE-MQ----------------PLRDVLSE------------LI---RYDEVS---RHLAGMV------------SG 382 (499)
T ss_dssp ---CGG-GH----------------HHHHHHHH------------HH---TSSHHH---HHHHHHH------------HT
T ss_pred ---Cch-HH----------------HHHHHHHH------------hh---cCHHHH---HHHHHHH------------hC
Confidence 000 00 01110100 00 011110 1111111 12
Q ss_pred cCccccCCccccCCCCCCCCCCCCCCCccccccCCCCCCCCCcceeeecccCCCCcceeeeeCCCCCcceEEEEEcCCcc
Q 005056 518 LGFRYLKGALVPDSNCEVGAPEAPTGHRRDFVPSANPGSRLPHMNVRVLSTVRNREIISTLDLVSGDKVEFLLIIAPVEE 597 (716)
Q Consensus 518 lgy~Y~~~~v~~~~~~~~~~~~~~~~~~~~~~p~~~pG~R~PH~~l~~~~~~~~~~~~st~Dl~~~~~~~f~Ll~~~~~~ 597 (716)
++++|.++. . +...||.|+||+||.. .+..+||+||++.+ .|+||++.+.
T Consensus 383 ~~~~Y~~~~----~------------------~~~~~G~r~p~~~l~~-----~~~~~~l~d~~~~~--~~~ll~~~~~- 432 (499)
T 2qa2_A 383 LDIRYEVDG----G------------------DHPLLGMRMPHQELVR-----AHGKTSTTELLHPA--RGVLLDIADD- 432 (499)
T ss_dssp TTCCCCCCS----C------------------SCTTTTSBCCCCEEEC-----SSSEEETTGGGTTC--SEEEEECSCC-
T ss_pred CCCccCCCC----C------------------CCCCCCCCCCCCeeec-----CCCceeHHHHhcCC--eEEEEEecCc-
Confidence 678897531 0 0125899999999974 22358999999754 4999998642
Q ss_pred chHHHHHHHHhhhhcCCceEEEEEcCCCCcchhhhhhccccCCCCccchhhhhhccCCCcchhhhhcccCCceEEEcCCc
Q 005056 598 SYHLARAALKVAEDFKVPTKVCVLWPAGTTNEVEFRSAAELAPWKNYIDVEEVKRSSDSLSWWRICKMTDMGAILVRPDD 677 (716)
Q Consensus 598 ~~~~~~aa~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~gavLVRPDg 677 (716)
..|.. ++....-.++++... ..+ ...| +++.+.++|||||||
T Consensus 433 -~~~~~----~~~~~~~~~~~~~~~---------------------~~~---------~~~~---~~~~~~~~~LvRPDg 474 (499)
T 2qa2_A 433 -AEVRE----AATGWSDRVDIVTAS---------------------LHD---------APPQ---GPLSDARAVLVRPDG 474 (499)
T ss_dssp -HHHHH----HTGGGTTTEEEEECE---------------------ESS---------CCSS---STTTTCSEEEECTTS
T ss_pred -ccchh----hhhcccccEEEecCc---------------------ccc---------cccc---cccCCCcEEEECCCC
Confidence 23332 111222223332210 000 0123 356778999999999
Q ss_pred eEEEeeCCCCCCChHHHHHHHHHHhhCCC
Q 005056 678 HIAWRSKSGVSGNPKLEMEMAFSAVLGIK 706 (716)
Q Consensus 678 ~VaWr~~~~~~~~~~~~l~~~~~~~~~~~ 706 (716)
|||||+... . ..|.++|.+++|..
T Consensus 475 ~vaw~~~~~--~---~~l~~~l~~~~~~~ 498 (499)
T 2qa2_A 475 YVAWISPGS--R---AGLTEALDRWFGPA 498 (499)
T ss_dssp BEEEEESSC--S---SCHHHHHHHHHCSC
T ss_pred EEEEEeCCc--h---HHHHHHHHHhhCCC
Confidence 999998742 2 35899999998854
No 6
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=100.00 E-value=9.3e-57 Score=522.80 Aligned_cols=547 Identities=20% Similarity=0.268 Sum_probs=339.2
Q ss_pred ccCCEEEECCCHHHHHHHHHHHh-CCCCEEEECCCCCCCCCCCeeeeChhHHHHHHhhhchHHHHHhcCCCccccceeEE
Q 005056 42 AVVPVLIVGAGPVGLVLSILLTK-LGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIY 120 (716)
Q Consensus 42 ~~~dVlIVGaGpaGLt~Al~Lar-~Gi~v~liEr~~~~~~~p~a~~i~~rtmeilr~l~Gl~~~l~~~~~~~~~~~~~~~ 120 (716)
.++||+||||||+||++|+.|++ +|++|+||||++.+...+++..++++++++|+++ |+.+++.+.+.+..... .+
T Consensus 31 ~~~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~~~~~g~a~~l~~~t~e~l~~l-Gl~~~~~~~~~~~~~~~--~~ 107 (639)
T 2dkh_A 31 SQVDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEGPMELGQADGIACRTMEMFEAF-EFADSILKEACWINDVT--FW 107 (639)
T ss_dssp SEEEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSSCCSSCSCCEECHHHHHHHHHT-TCHHHHHHHSEEECEEE--EE
T ss_pred CCCcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHc-CcHHHHHHhcccccceE--EE
Confidence 46899999999999999999999 9999999999999888999999999999999999 99999987765432211 11
Q ss_pred eecC--CCCceeeccCCCccccccccCCccccccChHHHHHHHHHHHHhcCceeecccccccccccccccceEEeCcEEE
Q 005056 121 CTSV--TGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECV 198 (716)
Q Consensus 121 ~~~~--~g~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~l~~~~~~~~~v~~g~~v~ 198 (716)
..+. .|... ...... ......++.....++|..|+++|.+.+.+.|+ +++|+++++|+
T Consensus 108 ~~~~~~~g~~~-~~~~~~--~~~~~~~~~~~~~i~q~~l~~~L~~~a~~~g~-----------------~v~v~~~~~v~ 167 (639)
T 2dkh_A 108 KPDPGQPGRIA-RHGRVQ--DTEDGLSEFPHVILNQARVHDHYLERMRNSPS-----------------RLEPHYARRVL 167 (639)
T ss_dssp EECTTSTTCEE-EEEEEE--SSCTTSCSSCEEECCHHHHHHHHHHHHHHSTT-----------------CCCCBCSEEEE
T ss_pred CCCCCCCcceE-eecccC--cccCCCCCCceEeeCHHHHHHHHHHHHHhCCC-----------------CcEEecCCEEE
Confidence 1111 12211 110000 00001123334678999999999999998863 13789999999
Q ss_pred EEEecCC----eEEEEEEec---cCCceeeEEEEecEEEecCCCChhhhhhcCCCccccccccceEEEEEec-Ccccccc
Q 005056 199 SVSATDQ----CINVIASFL---KEGKCTERNIQCNILIGTDGAGSTVRKLVGIDLVGEKDLQKLVSVHFLS-KDLGDYL 270 (716)
Q Consensus 199 ~i~~~~~----gv~v~v~~~---~~g~~~~~~i~ad~VVgADG~~S~VR~~lgi~~~g~~~~~~~~~i~~~~-~~l~~~~ 270 (716)
+++++++ +|++++... .+|+ .++++|||||+|||++|.||+++|+++.|......+..+.... .++..
T Consensus 168 ~l~~~~~~~~~~v~v~~~~~~~~~~G~--~~~i~a~~vVgADG~~S~vR~~lg~~~~g~~~~~~~~~~~~~~~~~~p~-- 243 (639)
T 2dkh_A 168 DVKVDHGAADYPVTVTLERCDAAHAGQ--IETVQARYVVGCDGARSNVRRAIGRQLVGDSANQAWGVMDVLAVTDFPD-- 243 (639)
T ss_dssp EEEECTTCSSCCEEEEEEECSGGGTTC--EEEEEEEEEEECCCTTCHHHHHTTCCCEECSCSCCEEEEEEEEEECCTT--
T ss_pred EEEECCCCCcCCEEEEEEeccccCCCC--eEEEEeCEEEECCCcchHHHHHhCCCCCCCCccceEEEEEEEEccCCCc--
Confidence 9998763 688777631 1343 3589999999999999999999999988766554433332211 11111
Q ss_pred ccCCCceEEEEEecCceEEEEEecCCCC-eEEEEEecCC--CC--CCCCCCCHHHHHHHHHHHcCCCCCceeEEee---c
Q 005056 271 LNERPGMLFFIFNTEAIGVLVAHDLKEG-EFILQVPFYP--PQ--QNLEDFSPEICEKLIFKLVGWELSDIDVIDI---K 342 (716)
Q Consensus 271 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~--~~--~~~~~~~~e~~~~~i~~~~g~~~~~~~i~~~---~ 342 (716)
.. .. +.+..+....++++.+ ++ .+.+.+.+.. .. ......+.+.+.+.+++.++... +++..+ .
T Consensus 244 --~~-~~-~~~~~~~g~~~~~P~~--~~~~~r~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~--~~~~~~~~~~ 315 (639)
T 2dkh_A 244 --VR-YK-VAIQSEQGNVLIIPRE--GGHLVRFYVEMDKLDADERVASRNITVEQLIATAQRVLHPYK--LEVKNVPWWS 315 (639)
T ss_dssp --TT-SE-EEEEETTEEEEEEECT--TSSCEEEEEECC-----------CCCHHHHHHHHHHHHTTSC--EEEEEEEEEE
T ss_pred --cc-ee-EEEEcCCceEEEEEcC--CCcEEEEEEECCCcCcccccccCCCCHHHHHHHHHHHhCccc--CcceeeeEEE
Confidence 11 11 2222244333444433 33 3433333222 11 12234677888888888877422 222222 2
Q ss_pred cceechhhhcccee----------cCCeEEEEccCCccCCCCCCccchhhHhHHHHHHHHHHHHHcCCCchhHHHHHHHH
Q 005056 343 PWVMHAEVAEKFLC----------CYNQIILAGDACHRFPPAGGFGMNTGVQDAHNLAWKIASVLKDIAPASILNTYETE 412 (716)
Q Consensus 343 ~w~~~~~~a~~~~~----------~~gRV~LvGDAAH~~~P~gG~G~n~gi~DA~~LawkLa~vl~g~a~~~lL~sY~~e 412 (716)
.|.+..+++++|+. ..|||||+|||||.|+|++|||||+||+||+||+|||+.+++|++.+.+|++|++|
T Consensus 316 ~~~~~~~~a~~~~~~~~~~~~~~~~~gRV~L~GDAAH~~~P~~GqG~n~ai~DA~nLawkLa~vl~g~a~~~lL~~Ye~e 395 (639)
T 2dkh_A 316 VYEIGQRICAKYDDVVDAVATPDSPLPRVFIAGDACHTHSPKAGQGMNFSMQDSFNLGWKLAAVLRKQCAPELLHTYSSE 395 (639)
T ss_dssp EECCCCEECSCSBSCCCSSCCTTSCCCCEEECGGGTEECCGGGCCTTHHHHHHHHHHHHHHHHHHTTSBCGGGGHHHHHH
T ss_pred ecccccchhhhhhccccccccccCccCcEEEEecccccCCCcccccchhhHHHHHHHHHHHHHHHcCCCcHHHHHHHHHH
Confidence 34456678888870 14999999999999999999999999999999999999999999889999999999
Q ss_pred HhHHHHHHHHHHHHHHHHhcccccccCCCcchhhhhHHHhhcccCCCCcHHHHHHHHhhHhhhhhhhhhhhcccCCCccc
Q 005056 413 RKPIAEFNTALSVQNFRAAMEVPSALGLDPTIANSVHQLINRVAGSVLPSVLQKALLEGIFKVGRAQLSESLLNESNPLG 492 (716)
Q Consensus 413 Rrp~a~~~~~~s~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~r~~~~~~~~~~~~p~~ 492 (716)
|+|+++.+++.+....+.+.. .+.... .... .
T Consensus 396 R~~~a~~~~~~s~~~~~~~~~-------~~~~~~--------------~~~~------------------------~--- 427 (639)
T 2dkh_A 396 RQVVAQQLIDFDREWAKMFSD-------PAKEGG--------------QGGV------------------------D--- 427 (639)
T ss_dssp HHHHHHHHHHHHHHSCC-----------------------------------------------------------C---
T ss_pred HHHHHHHHHHHHHHHHHHhcC-------CCcccc--------------cccc------------------------c---
Confidence 999999988876432211100 000000 0000 0
Q ss_pred hHHHHHHHHHHHcCCcccccccccccCccccCCccccCCCCCCCCCCCCCCCccccccCCCCCCCCCcceeeecccCCCC
Q 005056 493 SSRLAKLRHIFEEGKSLQLQFPAEDLGFRYLKGALVPDSNCEVGAPEAPTGHRRDFVPSANPGSRLPHMNVRVLSTVRNR 572 (716)
Q Consensus 493 ~~~~~~~~~~~~~~~~~~~~~~~~~lgy~Y~~~~v~~~~~~~~~~~~~~~~~~~~~~p~~~pG~R~PH~~l~~~~~~~~~ 572 (716)
...+.+.+.... .| ...+|++|.+|+|+.+++. ..+.+..+||.|+||+||... .++
T Consensus 428 ---~~~~~~~~~~~~----~~-~~g~~~~Y~~s~l~~~~~~------------~~~~~~~~~G~r~p~~~~~~~---~~g 484 (639)
T 2dkh_A 428 ---PKEFQKYFEQHG----RF-TAGVGTHYAPSLLTGQAKH------------QALASGFTVGMRFHSAPVVRV---CDA 484 (639)
T ss_dssp ---HHHHHHHHHHHH----HH-HTTCCCCCCSSSSSCCCTT------------GGGBTTSCTTSBCCCCEEEET---TTC
T ss_pred ---HHHHHHHHHHhc----cc-cccCCcccCCCCccCCCCc------------cccCCCCCCcCCCCCCeEEec---CCC
Confidence 001111111000 01 1238899999998754311 124566789999999999752 145
Q ss_pred cceeeeeCCCCCcceEEEEEcCCccchHHH-HHHHHhhhhc------------------CCceEEEEEcCCCCc-chhhh
Q 005056 573 EIISTLDLVSGDKVEFLLIIAPVEESYHLA-RAALKVAEDF------------------KVPTKVCVLWPAGTT-NEVEF 632 (716)
Q Consensus 573 ~~~st~Dl~~~~~~~f~Ll~~~~~~~~~~~-~aa~~~a~~~------------------g~~~~~~~~~~~~~~-~~~~~ 632 (716)
..++|+||+..+ ..|+||++.+.....|. .++.++++.+ +-.++++.|.+.... .|-..
T Consensus 485 ~~~~l~~~~~~~-g~~~ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 563 (639)
T 2dkh_A 485 KPVQLGHCGKAD-GRWRLYAFAAQNDLAQPESGLLALCRFLEGDAASPLRRFTPAGQDIDSIFDLRAVFPQAYTEVALET 563 (639)
T ss_dssp CEEEGGGGCCSS-SCEEEEEECCTTTTTCTTSHHHHHHHHHHHCTTCHHHHHSCTTSCTTSSEEEEEECSSCGGGCCGGG
T ss_pred CEEEHHHhhccC-CCEEEEEecCCCCchhhHHHHHHHHHHHhhCCccHHHhcCCCCCCcCceEEEEEEecCCCCccchhh
Confidence 678999999632 25999987543211122 2222333322 114777777433110 00000
Q ss_pred hh-----cccc----CCCCccchhhhhhccCCCcchhhhhcccC-Cce-EEEcCCceEEEeeCCCCCCChHHHHHHHHHH
Q 005056 633 RS-----AAEL----APWKNYIDVEEVKRSSDSLSWWRICKMTD-MGA-ILVRPDDHIAWRSKSGVSGNPKLEMEMAFSA 701 (716)
Q Consensus 633 ~~-----~~~~----~~~~~~~d~~~~~~~~~~~~~~~~~~~~~-~ga-vLVRPDg~VaWr~~~~~~~~~~~~l~~~~~~ 701 (716)
.+ .... +.+..|.|.. ..+.+.|++.+|+.+ .|+ |||||||||||+... ++ ...|...|..
T Consensus 564 ~p~~~~~~~~~~~~~~~~~~~~d~~----~~~~~~~~~~~g~~~~~g~~v~vRPD~yv~~~~~~---~~-~~~l~~~~~~ 635 (639)
T 2dkh_A 564 LPALLLPPKGQLGMIDYEKVFSPDL----KNAGQDIFELRGIDRQQGALVVVRPDQYVAQVLPL---GD-HAALSAYFES 635 (639)
T ss_dssp SCGGGSCEETTTTEECCCSEEECCC----SSTTCCHHHHTTBCTTTCEEEEECTTSBEEEEECT---TC-HHHHHHHHHT
T ss_pred CcHhhCCcccccccccceeEEeCCC----cccccchHHHhCCCCCceEEEEECCCCceEEeech---hh-HHHHHHHHHH
Confidence 00 0000 1122344410 000146888899987 354 899999999999762 23 4667877776
Q ss_pred hh
Q 005056 702 VL 703 (716)
Q Consensus 702 ~~ 703 (716)
++
T Consensus 636 ~~ 637 (639)
T 2dkh_A 636 FM 637 (639)
T ss_dssp TB
T ss_pred Hh
Confidence 54
No 7
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=100.00 E-value=9.5e-54 Score=489.81 Aligned_cols=495 Identities=22% Similarity=0.271 Sum_probs=322.9
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCCCCCCCeeeeChhHHHHHHhhhchHHHHHhcCCCccccceeEE
Q 005056 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIY 120 (716)
Q Consensus 41 ~~~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~~~~p~a~~i~~rtmeilr~l~Gl~~~l~~~~~~~~~~~~~~~ 120 (716)
.+++||+||||||+||++|+.|+++|++|+||||.+.+...+++..++++++++|+++ |+++.+.+.+..... . .
T Consensus 47 ~~~~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~~~~~~r~~~l~~~s~~~l~~l-Gl~~~l~~~~~~~~~--~-~- 121 (570)
T 3fmw_A 47 ALTTDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVEPVGHDRAGALHIRTVETLDLR-GLLDRFLEGTQVAKG--L-P- 121 (570)
T ss_dssp ----CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSSCCCSSSCCCBCHHHHHHHHTT-TCHHHHTTSCCBCSB--C-C-
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCCCCCCceEEEECHHHHHHHHHc-CChHHHHhcCcccCC--c-e-
Confidence 4568999999999999999999999999999999999988999999999999999999 999999877654321 0 0
Q ss_pred eecCCCCceeeccCCCccccccccCCc-cccccChHHHHHHHHHHHHhcCceeecccccccccccccccceEEeCcEEEE
Q 005056 121 CTSVTGPILGSVDHMQPQDFEKVVSPV-SVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVS 199 (716)
Q Consensus 121 ~~~~~g~~l~~~~~~~~~~~~~~~~p~-~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~l~~~~~~~~~v~~g~~v~~ 199 (716)
..+.....++ +.....+. ..+.++|..|++.|.+.+.+.|+ +|+++++|++
T Consensus 122 ---~~~~~~~~~~------~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv-------------------~i~~~~~v~~ 173 (570)
T 3fmw_A 122 ---FAGIFTQGLD------FGLVDTRHPYTGLVPQSRTEALLAEHAREAGA-------------------EIPRGHEVTR 173 (570)
T ss_dssp ---BTTBCTTCCB------GGGSCCSCCSBBCCCHHHHHHHHHHHHHHHTE-------------------ECCBSCEEEE
T ss_pred ---eCCccccccc------ccccCCCCCeeEEeCHHHHHHHHHHHHHhCCC-------------------EEEeCCEEEE
Confidence 0111000010 01001111 24578999999999999998887 8999999999
Q ss_pred EEecCCeEEEEEEeccCCceeeEEEEecEEEecCCCChhhhhhcCCCccccccccceEEEEEecCccccccccCCCceEE
Q 005056 200 VSATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGSTVRKLVGIDLVGEKDLQKLVSVHFLSKDLGDYLLNERPGMLF 279 (716)
Q Consensus 200 i~~~~~gv~v~v~~~~~g~~~~~~i~ad~VVgADG~~S~VR~~lgi~~~g~~~~~~~~~i~~~~~~l~~~~~~~~~~~~~ 279 (716)
+++++++|++++.. .+|+ .+++|||||+|||++|.||+++|+++.+..+....+...+...... .. ..
T Consensus 174 l~~~~~~v~v~~~~-~~G~---~~~~a~~vV~ADG~~S~vR~~lGi~~~~~~~~~~~~~~~v~~~~~~------~~--~~ 241 (570)
T 3fmw_A 174 LRQDAEAVEVTVAG-PSGP---YPVRARYGVGCDGGRSTVRRLAADRFPGTEATVRALIGYVTTPERE------VP--RR 241 (570)
T ss_dssp CCBCSSCEEEEEEE-TTEE---EEEEESEEEECSCSSCHHHHHTTCCCCCCCCCEEEEEEECCCCSCS------SC--CC
T ss_pred EEEcCCeEEEEEEe-CCCc---EEEEeCEEEEcCCCCchHHHHcCCCCccceeeeEEEEEEEEecCCC------cc--eE
Confidence 99999999888753 2341 4799999999999999999999999988877666655544332111 00 11
Q ss_pred EEEecCceEEEEEecCCCC---eEEEEEecCCCCCCCCCCCHHHHHHHHHHHcCCCCCceeEE-eeccceechhhhccce
Q 005056 280 FIFNTEAIGVLVAHDLKEG---EFILQVPFYPPQQNLEDFSPEICEKLIFKLVGWELSDIDVI-DIKPWVMHAEVAEKFL 355 (716)
Q Consensus 280 ~~~~~~~~g~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~e~~~~~i~~~~g~~~~~~~i~-~~~~w~~~~~~a~~~~ 355 (716)
+.+.+....++ ..+..++ .+++..+...........+.+.+.+.+++.++......+.. ....|++....+++|+
T Consensus 242 ~~~~~~G~~~~-~~P~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 320 (570)
T 3fmw_A 242 WERTPDGILVL-AFPPEGGLGPGWSSSSTGHSPAADEGPVTLEDLGAAVARVRGTPLTLTEPVSWLSRFGDASRQAKRYR 320 (570)
T ss_dssp CCCCCSSCEEE-CCCC------CEEEEEESCC-----CCCCHHHHHHHTTSSSSCCCCCCSCCEEEEEECCCCEECSCSE
T ss_pred EEecCCEEEEE-EeecCCCeEEEEEEEeCCCCccccccCCCHHHHHHHHHHHhhcccccceeeeeeEEeecccccccccc
Confidence 12223322222 1222333 33333331121223345677788888887777543333333 3456777788899998
Q ss_pred ecCCeEEEEccCCccCCCCCCccchhhHhHHHHHHHHHHHHHcCCCchhHHHHHHHHHhHHHHHHHHHHHHHHHHhcccc
Q 005056 356 CCYNQIILAGDACHRFPPAGGFGMNTGVQDAHNLAWKIASVLKDIAPASILNTYETERKPIAEFNTALSVQNFRAAMEVP 435 (716)
Q Consensus 356 ~~~gRV~LvGDAAH~~~P~gG~G~n~gi~DA~~LawkLa~vl~g~a~~~lL~sY~~eRrp~a~~~~~~s~~~~~~~~~~~ 435 (716)
. |||+|+|||||.++|++|||||+||+||.+|+|+|++++++++.+.+|++|++||++++..++..+....+.+..
T Consensus 321 ~--grv~LvGDAAH~~~P~~GqG~n~gl~DA~~La~~La~~~~g~~~~~lL~~Ye~eR~~~~~~~~~~s~~~~~l~~~-- 396 (570)
T 3fmw_A 321 S--GRVLLAGDAAHVHFPIGGQGLNTGLQDAVNLGWKLAARVRGWGSEELLDTYHDERHPVAERVLLNTRAQLALMRP-- 396 (570)
T ss_dssp E--TTEEECGGGTEECCCCSSCHHHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCS--
T ss_pred c--CCEEEEEecceecCCCcCcCHhHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--
Confidence 4 999999999999999999999999999999999999999999999999999999999999999888655443321
Q ss_pred cccCCCcchhhhhHHHhhcccCCCCcHHHHHHHHhhHhhhhhhhhhhhcccCCCccchHHHHHHHHHHHcCCcccccccc
Q 005056 436 SALGLDPTIANSVHQLINRVAGSVLPSVLQKALLEGIFKVGRAQLSESLLNESNPLGSSRLAKLRHIFEEGKSLQLQFPA 515 (716)
Q Consensus 436 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~r~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 515 (716)
++.....+ +...+.. + ..| .+++.+... .
T Consensus 397 -----~~~~~~~l----------------R~~~~~l------------~---~~~-------~~~~~~~~~--------~ 425 (570)
T 3fmw_A 397 -----DEQHTTPL----------------RGFVEEL------------L---GTD-------EVNRYFTGM--------I 425 (570)
T ss_dssp -----CTTTHHHH----------------HHHHHHH------------T---TSH-------HHHHHHHHH--------H
T ss_pred -----CchHHHHH----------------HHHHHHH------------h---cCH-------HHHHHHHHH--------H
Confidence 11101111 1111110 0 011 111111100 0
Q ss_pred cccCccccCCccccCCCCCCCCCCCCCCCccccccCCCCCCCCCcceeeecccCCCCcceeeeeCCCCCcceEEEEEcCC
Q 005056 516 EDLGFRYLKGALVPDSNCEVGAPEAPTGHRRDFVPSANPGSRLPHMNVRVLSTVRNREIISTLDLVSGDKVEFLLIIAPV 595 (716)
Q Consensus 516 ~~lgy~Y~~~~v~~~~~~~~~~~~~~~~~~~~~~p~~~pG~R~PH~~l~~~~~~~~~~~~st~Dl~~~~~~~f~Ll~~~~ 595 (716)
.-++.+|+.+ .+.++. . ....+|.|+|++.|.. .++..+.++||+..+ .|+||.+.+
T Consensus 426 ~g~~~~Y~~~--~~~~~~--------~-------~~~~~G~r~pd~~l~~----~~g~~~~l~~~l~~~--~~~ll~~~~ 482 (570)
T 3fmw_A 426 TGTDVRYATF--APAASA--------R-------PHPWPGRFAGGLVLSR----PSGEPVPVAELLRSA--RPLLLDLAG 482 (570)
T ss_dssp HSTTCCCCCS--CC------------C-------CCSSTTCBCTTCEECC----STTCCEEHHHHSTTC--CCEEECSSC
T ss_pred hCCCcccCCC--CCCCCC--------C-------CCccccCcCCCceeec----CCCcceeHHHHhcCC--eEEEEEecC
Confidence 1256677654 111000 0 1246999999999974 133457999999865 499998864
Q ss_pred ccchHHHHHHHHhhhhcCCceEEEEEcCCCCcchhhhhhccccCCCCccchhhhhhccCCCcchhhhhcccCCceEEEcC
Q 005056 596 EESYHLARAALKVAEDFKVPTKVCVLWPAGTTNEVEFRSAAELAPWKNYIDVEEVKRSSDSLSWWRICKMTDMGAILVRP 675 (716)
Q Consensus 596 ~~~~~~~~aa~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~gavLVRP 675 (716)
.. .. ..++....-.++++.. . ..+. .+-.+|||||
T Consensus 483 ~~--~~----~~~~~~~~~~~~~~~~--~----------------------------------~~~~---~~~~~~lvrp 517 (570)
T 3fmw_A 483 RA--DL----REATRPWSDRVSVVAG--E----------------------------------ATVE---PPAQALLVRP 517 (570)
T ss_dssp BH--HH----HHTTTTCSSCEEECCC--C----------------------------------SCCS---SCCSEEEECT
T ss_pred Cc--ch----hhhccccCCceEEEec--c----------------------------------cCCC---CCceEEEECC
Confidence 21 22 2223333333333221 0 0000 0115899999
Q ss_pred CceEEEeeCCCCCCChHHHHHHHHHHhhCCCC
Q 005056 676 DDHIAWRSKSGVSGNPKLEMEMAFSAVLGIKP 707 (716)
Q Consensus 676 Dg~VaWr~~~~~~~~~~~~l~~~~~~~~~~~~ 707 (716)
||||||-++. + +....|.++|.+.+|...
T Consensus 518 dg~vaw~~~~--~-~~~~~~~~~~~~w~~~~~ 546 (570)
T 3fmw_A 518 DGYVAWAGSP--A-ATADELRASLARWFGPPA 546 (570)
T ss_dssp TSBEEEEECT--T-CCHHHHHHHHHHHHCCCC
T ss_pred CceEEEecCC--C-CChHHHHHHHHHhcCCCC
Confidence 9999999862 2 234679999999999754
No 8
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=100.00 E-value=1.3e-40 Score=366.14 Aligned_cols=352 Identities=22% Similarity=0.202 Sum_probs=212.6
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCCCCCCC--eeeeChhHHHHHHhhhchHHHHHhcCCCccccceeEEe
Q 005056 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQ--AHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYC 121 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~~~~p~--a~~i~~rtmeilr~l~Gl~~~l~~~~~~~~~~~~~~~~ 121 (716)
.+|+||||||+||++|+.|+++|++|+||||++.+...++ +..++++++++|+++ |+.+.+................
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~~~~~~~G~~i~l~~~~~~~L~~l-g~~~~~~~~~~~~~~~~~~~~~ 80 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSAASSILPGYGIHINSFGKQALQEC-LPAENWLAFEEASRYIGGQSRF 80 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCSSCCCCEEEECHHHHHHHHHH-SCHHHHHHHHHHCEEECCCCEE
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCEEEEecCCCCCcCCCceEEeeCHHHHHHHHHc-CChHHHHHhhhhhcccCcceeE
Confidence 4799999999999999999999999999999998876654 577899999999999 9887764422111100000011
Q ss_pred ecCCCCceeeccCCCccccccccCCccccccChHHHHHHHHHHHHhcCceeecccccccccccccccceEEeCcEEEEEE
Q 005056 122 TSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVS 201 (716)
Q Consensus 122 ~~~~g~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~l~~~~~~~~~v~~g~~v~~i~ 201 (716)
....+..+....... .............+.|..|+++|.+.+ +. +|+|+++|++++
T Consensus 81 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~i~R~~L~~~L~~~~---~~-------------------~v~~~~~v~~~~ 136 (412)
T 4hb9_A 81 YNERMRLLAVHGGIS--PMAGKIISEQRLSISRTELKEILNKGL---AN-------------------TIQWNKTFVRYE 136 (412)
T ss_dssp ECTTSCEEEC----------------CEEEEEHHHHHHHHHTTC---TT-------------------TEECSCCEEEEE
T ss_pred ecCCcceecccCCcc--ccccccccccceEeeHHHHHHHHHhhc---cc-------------------eEEEEEEEEeee
Confidence 111222221111000 000001122335678999999887653 22 789999999999
Q ss_pred ecCC-eEEEEEEeccCCceeeEEEEecEEEecCCCChhhhhhcCCCccccccccceEEEEEecC-ccc----cccc----
Q 005056 202 ATDQ-CINVIASFLKEGKCTERNIQCNILIGTDGAGSTVRKLVGIDLVGEKDLQKLVSVHFLSK-DLG----DYLL---- 271 (716)
Q Consensus 202 ~~~~-gv~v~v~~~~~g~~~~~~i~ad~VVgADG~~S~VR~~lgi~~~g~~~~~~~~~i~~~~~-~l~----~~~~---- 271 (716)
+.++ +|++++. +|+ +++|||||||||++|.||+++++...........+....... ... ....
T Consensus 137 ~~~~~~v~v~~~---dG~----~~~adlvVgADG~~S~vR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (412)
T 4hb9_A 137 HIENGGIKIFFA---DGS----HENVDVLVGADGSNSKVRKQYLPFIERFDVGVSMIIGRARLTPALTALLPQNFRDGTP 209 (412)
T ss_dssp ECTTSCEEEEET---TSC----EEEESEEEECCCTTCHHHHHHSTTCCCEEEEEEEEEEEEECCHHHHHHSCGGGTSSCC
T ss_pred EcCCCeEEEEEC---CCC----EEEeeEEEECCCCCcchHHHhCCCccccccceeEEEEEEecchhhhcchhhhhccCCc
Confidence 8655 5666554 564 689999999999999999999876654332222222211111 000 0000
Q ss_pred ----cCCCceEEEE--EecCceEEEEEecCCCCeEEEEE---ecCCCCCCCCCCCHHHHHHHHHHHcCCCCCce------
Q 005056 272 ----NERPGMLFFI--FNTEAIGVLVAHDLKEGEFILQV---PFYPPQQNLEDFSPEICEKLIFKLVGWELSDI------ 336 (716)
Q Consensus 272 ----~~~~~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~e~~~~~i~~~~g~~~~~~------ 336 (716)
...+...++. ..+....+.... .....+..++ ..........+++.+...+.+++.+..-...+
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~li~~ 288 (412)
T 4hb9_A 210 NSIVPKSPDWLFISMWRAPVNIHVEASL-AEIDNFIVWVYVAATDSLPDNITDFSAEALCDLVQSRMISWDPSLHTLVQQ 288 (412)
T ss_dssp EEECCSSSEEEEEEEEEEESCTTSCGGG-CCEEEEEEEEEEEEGGGSCTTGGGCCHHHHHHHHHHHTTTSCHHHHHHHHT
T ss_pred ceEeecCCCcceeeeeecCCceeEEEec-cCCCceEEEEEecccccccccccccchHHHHHHHHHHhccCChHHHHHHHh
Confidence 0011111110 011000000000 0112222222 11111223345666766666666543211110
Q ss_pred -eEEeeccceec-hhhhccceecCCeEEEEccCCccCCCCCCccchhhHhHHHHHHHHHHHHHcCCCc-hhHHHHHHHHH
Q 005056 337 -DVIDIKPWVMH-AEVAEKFLCCYNQIILAGDACHRFPPAGGFGMNTGVQDAHNLAWKIASVLKDIAP-ASILNTYETER 413 (716)
Q Consensus 337 -~i~~~~~w~~~-~~~a~~~~~~~gRV~LvGDAAH~~~P~gG~G~n~gi~DA~~LawkLa~vl~g~a~-~~lL~sY~~eR 413 (716)
+.....+|... .....+|. .|||+|+|||||.|+|++|||||+||+||++|+|+|+.++++... +.+|++|++||
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~--~grv~LiGDAAH~~~P~~GqG~n~ai~DA~~La~~L~~~~~~~~~~~~aL~~Ye~~R 366 (412)
T 4hb9_A 289 SDMENISPLHLRSMPHLLPWK--SSTVTLLGDAIHNMTPMTGSGANTALRDALLLTQKLASVASGHEELVKAISDYEQQM 366 (412)
T ss_dssp SCTTCCEEEEEEECCCCCCCC--CCSEEECTHHHHCSSCCSSSHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHH
T ss_pred cccceeccchhcccccccccc--ccCEEEEEcccccCCCchhhHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHH
Confidence 00111223222 22345676 599999999999999999999999999999999999999987765 78999999999
Q ss_pred hHHHHHHHHHHHHHHHH
Q 005056 414 KPIAEFNTALSVQNFRA 430 (716)
Q Consensus 414 rp~a~~~~~~s~~~~~~ 430 (716)
+|+++.+++.|.++.+.
T Consensus 367 ~~~~~~~~~~s~~~~~~ 383 (412)
T 4hb9_A 367 RAYANEIVGISLRSAQN 383 (412)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999999877654
No 9
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=100.00 E-value=8.7e-37 Score=336.41 Aligned_cols=341 Identities=16% Similarity=0.141 Sum_probs=222.3
Q ss_pred CCCccCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCCCCCCCeeeeChhHHHHHHhhhchHHHHHhcCCCcccccee
Q 005056 39 SNEAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKF 118 (716)
Q Consensus 39 ~~~~~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~~~~p~a~~i~~rtmeilr~l~Gl~~~l~~~~~~~~~~~~~ 118 (716)
++++++||+||||||+||++|+.|+++|++|+||||.+.+...+++..++++++++|+++ |+.+++.+.+.+... +
T Consensus 19 ~~~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~~~~~~~~~~l~~~~~~~l~~l-g~~~~~~~~~~~~~~---~ 94 (407)
T 3rp8_A 19 YFQGHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKEIKPVGAAISVWPNGVKCMAHL-GMGDIMETFGGPLRR---M 94 (407)
T ss_dssp ----CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSCC----CEEEECHHHHHHHHHT-TCHHHHHHHSCCCCE---E
T ss_pred cCCCCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCcCeeEEECHHHHHHHHHC-CCHHHHHhhcCCCcc---e
Confidence 345668999999999999999999999999999999998888889999999999999999 999999888766532 2
Q ss_pred EEeecCCCCceeeccCCCccccccccCCccccccChHHHHHHHHHHHHhcCceeecccccccccccccccceEEeCcEEE
Q 005056 119 IYCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECV 198 (716)
Q Consensus 119 ~~~~~~~g~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~l~~~~~~~~~v~~g~~v~ 198 (716)
.+.....|..+..++.. .+.. ..+...+.++|..|++.|.+.+.+ + +|+++++|+
T Consensus 95 ~~~~~~~g~~~~~~~~~---~~~~-~~~~~~~~i~r~~l~~~L~~~~~~--~-------------------~i~~~~~v~ 149 (407)
T 3rp8_A 95 AYRDFRSGENMTQFSLA---PLIE-RTGSRPCPVSRAELQREMLDYWGR--D-------------------SVQFGKRVT 149 (407)
T ss_dssp EEEETTTCCEEEEEECH---HHHH-HHSSCCEEEEHHHHHHHHHHHHCG--G-------------------GEEESCCEE
T ss_pred EEEECCCCCEeEEecch---hhhh-hcCCceEEEEHHHHHHHHHHhCCc--C-------------------EEEECCEEE
Confidence 22222225554433221 0000 112334678999999999999876 4 899999999
Q ss_pred EEEecCCeEEEEEEeccCCceeeEEEEecEEEecCCCChhhhhhc-CCCccccccccceEEEEEecCccccccccCCCce
Q 005056 199 SVSATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGSTVRKLV-GIDLVGEKDLQKLVSVHFLSKDLGDYLLNERPGM 277 (716)
Q Consensus 199 ~i~~~~~gv~v~v~~~~~g~~~~~~i~ad~VVgADG~~S~VR~~l-gi~~~g~~~~~~~~~i~~~~~~l~~~~~~~~~~~ 277 (716)
++++++++|++++. +|+ +++||+||+|||.+|.||+.+ +............+...+..+. . ......
T Consensus 150 ~i~~~~~~v~v~~~---~g~----~~~a~~vV~AdG~~S~vr~~l~~~~~~~~~~~~~~~~~~~~~~~---~--~~~~~~ 217 (407)
T 3rp8_A 150 RCEEDADGVTVWFT---DGS----SASGDLLIAADGSHSALRPWVLGFTPQRRYAGYVNWNGLVEIDE---A--LAPGDQ 217 (407)
T ss_dssp EEEEETTEEEEEET---TSC----EEEESEEEECCCTTCSSHHHHHSSCCCCEEEEEEEEEEEEECCT---T--TCCTTE
T ss_pred EEEecCCcEEEEEc---CCC----EEeeCEEEECCCcChHHHHHhcCCCCCCcccCcEEEEEEEeccc---c--cCCCCc
Confidence 99999999877654 453 789999999999999999998 7643211111111111121111 0 111223
Q ss_pred EEEEEecCceEEEEEecCCCCeEEEEEecCCCCCCCCCCCHHHHHHHHHHHcCCCCC----------ceeEEeeccceec
Q 005056 278 LFFIFNTEAIGVLVAHDLKEGEFILQVPFYPPQQNLEDFSPEICEKLIFKLVGWELS----------DIDVIDIKPWVMH 347 (716)
Q Consensus 278 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~i~~~~g~~~~----------~~~i~~~~~w~~~ 347 (716)
...++.++...++++.. ++.+.+.+....+... ..+++...+.+++.+..... ...+.....+...
T Consensus 218 ~~~~~~~~~~~~~~p~~--~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (407)
T 3rp8_A 218 WTTFVGEGKQVSLMPVS--AGRFYFFFDVPLPAGL--AEDRDTLRADLSRYFAGWAPPVQKLIAALDPQTTNRIEIHDIE 293 (407)
T ss_dssp EEEEEETTEEEEEEEET--TTEEEEEEEEECCTTC--SCCTTTHHHHHHHHTTTCCHHHHHHHHHSCGGGCEEEEEEECC
T ss_pred eEEEECCCcEEEEEEcC--CCeEEEEEEeCCCcCC--CCCchhHHHHHHHHhcCCChHHHHHHHcCCccceeEEeeEecC
Confidence 33334555544555443 3454444333222211 11222222333333321110 0011001111111
Q ss_pred hhhhccceecCCeEEEEccCCccCCCCCCccchhhHhHHHHHHHHHHHHHcCCCchhHHHHHHHHHhHHHHHHHHHHHHH
Q 005056 348 AEVAEKFLCCYNQIILAGDACHRFPPAGGFGMNTGVQDAHNLAWKIASVLKDIAPASILNTYETERKPIAEFNTALSVQN 427 (716)
Q Consensus 348 ~~~a~~~~~~~gRV~LvGDAAH~~~P~gG~G~n~gi~DA~~LawkLa~vl~g~a~~~lL~sY~~eRrp~a~~~~~~s~~~ 427 (716)
..++|. .+||+|+|||||.++|++|||+|+||+||.+|+|+|+. .+ ..+.+|++|+++|++++..+++.+...
T Consensus 294 --~~~~~~--~~rv~LvGDAAh~~~P~~GqG~~~al~da~~La~~L~~--~~-~~~~~l~~Y~~~r~~~~~~~~~~s~~~ 366 (407)
T 3rp8_A 294 --PFSRLV--RGRVALLGDAGHSTTPDIGQGGCAAMEDAVVLGAVFRQ--TR-DIAAALREYEAQRCDRVRDLVLKARKR 366 (407)
T ss_dssp --CCSCCE--ETTEEECGGGTCCCCGGGSCHHHHHHHHHHHHHHHHHS--CC-CHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred --CCCcee--cCCEEEEEcccccCCcchhhhHHHHHHHHHHHHHHHhc--CC-CHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 226776 49999999999999999999999999999999999984 23 578899999999999999999988776
Q ss_pred HHHh
Q 005056 428 FRAA 431 (716)
Q Consensus 428 ~~~~ 431 (716)
.+.+
T Consensus 367 ~~~~ 370 (407)
T 3rp8_A 367 CDIT 370 (407)
T ss_dssp HHHH
T ss_pred hhhh
Confidence 6554
No 10
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=100.00 E-value=2.4e-36 Score=331.32 Aligned_cols=338 Identities=18% Similarity=0.227 Sum_probs=221.0
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCC--CCCCCeeeeChhHHHHHHhhhchHHHHHhcCCCccccceeEE
Q 005056 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF--STHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIY 120 (716)
Q Consensus 43 ~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~--~~~p~a~~i~~rtmeilr~l~Gl~~~l~~~~~~~~~~~~~~~ 120 (716)
++||+||||||+||++|+.|+++|++|+||||.+.+ ....++..++++++++|+++ |+.+.+.+.+.+...+ .+
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~g~l~~~~~~~l~~l-g~~~~~~~~~~~~~~~---~~ 77 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHKAGIDNVILERQTPDYVLGRIRAGVLEQGMVDLLREA-GVDRRMARDGLVHEGV---EI 77 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHTCCEEEECSSCHHHHHTCCCCCEECHHHHHHHHHT-TCCHHHHHHCEEESCE---EE
T ss_pred CccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCcccCCCceEeECHHHHHHHHHc-CCcHHHHhcCCccceE---EE
Confidence 479999999999999999999999999999998753 23456678999999999999 9999988766543221 11
Q ss_pred eecCCCCceeeccCCCccccccccCCccccccChHHHHHHHHHHHHhcCceeecccccccccccccccceEEeCcEEEEE
Q 005056 121 CTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSV 200 (716)
Q Consensus 121 ~~~~~g~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~l~~~~~~~~~v~~g~~v~~i 200 (716)
.. .+.. ..++ +.....+.....++|..+.+.|.+.+.+.|+ +|+++++|+++
T Consensus 78 ~~--~~~~-~~~~------~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~-------------------~i~~~~~v~~i 129 (394)
T 1k0i_A 78 AF--AGQR-RRID------LKRLSGGKTVTVYGQTEVTRDLMEAREACGA-------------------TTVYQAAEVRL 129 (394)
T ss_dssp EE--TTEE-EEEC------HHHHHTSCCEEECCHHHHHHHHHHHHHHTTC-------------------EEESSCEEEEE
T ss_pred EE--CCce-EEec------cccccCCCceEEechHHHHHHHHHHHHhcCC-------------------eEEeceeEEEE
Confidence 11 1211 1111 1100112234567889999999999888776 99999999999
Q ss_pred EecC-CeEEEEEEeccCCceeeEEEEecEEEecCCCChhhhhhcCCCccccccccceEEEEEec--CccccccccCCCce
Q 005056 201 SATD-QCINVIASFLKEGKCTERNIQCNILIGTDGAGSTVRKLVGIDLVGEKDLQKLVSVHFLS--KDLGDYLLNERPGM 277 (716)
Q Consensus 201 ~~~~-~gv~v~v~~~~~g~~~~~~i~ad~VVgADG~~S~VR~~lgi~~~g~~~~~~~~~i~~~~--~~l~~~~~~~~~~~ 277 (716)
++++ +++++++. ++|+ +.++++|+||+|||.+|.||+.+++... ..+...+...+.. .+.. ...+..
T Consensus 130 ~~~~~~~~~v~~~--~~g~--~~~~~a~~vV~AdG~~S~vr~~l~~~~~--~~~~~~~~~~~~~~~~~~~----~~~~~~ 199 (394)
T 1k0i_A 130 HDLQGERPYVTFE--RDGE--RLRLDCDYIAGCDGFHGISRQSIPAERL--KVFERVYPFGWLGLLADTP----PVSHEL 199 (394)
T ss_dssp ECTTSSSCEEEEE--ETTE--EEEEECSEEEECCCTTCSTGGGSCGGGC--EEEEEEEEEEEEEEEESSC----CSCSSC
T ss_pred EEecCCceEEEEe--cCCc--EEEEEeCEEEECCCCCcHHHHhcCcccc--ccccccccceeEEEecCCC----CCccce
Confidence 9864 56777663 2553 3479999999999999999999976521 1111111111110 0110 111122
Q ss_pred EEEEEecCceEEEEEecCCCCeEEEEEecCCCCCCCCCCCHHHHHHHHHHHcCC----CCCceeEEeeccceechhhhcc
Q 005056 278 LFFIFNTEAIGVLVAHDLKEGEFILQVPFYPPQQNLEDFSPEICEKLIFKLVGW----ELSDIDVIDIKPWVMHAEVAEK 353 (716)
Q Consensus 278 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~i~~~~g~----~~~~~~i~~~~~w~~~~~~a~~ 353 (716)
++...++...++...+. +.+.+.+...+ ......++++...+.+.+.++. ......+.....|++....+++
T Consensus 200 -~~~~~~~g~~~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (394)
T 1k0i_A 200 -IYANHPRGFALCSQRSA--TRSQYYVQVPL-SEKVEDWSDERFWTELKARLPSEVAEKLVTGPSLEKSIAPLRSFVVEP 275 (394)
T ss_dssp -EEECCTTCCEEEEEEET--TEEEEEEEECT-TCCGGGCCHHHHHHHHHHTSCHHHHHHCCCCCEEEEEEEEEEEEEEEC
T ss_pred -EEEEcCCceEEEEecCC--CcEEEEEEeCC-CCCccccCHHHHHHHHHHhhCcccccccccCcceeeEEEEhhhhhccc
Confidence 22223433333333322 23333222222 2223345666555555544432 1111122222334455556777
Q ss_pred ceecCCeEEEEccCCccCCCCCCccchhhHhHHHHHHHHHHHHHcCCCchhHHHHHHHHHhHHHHHHHHHHHHHHH
Q 005056 354 FLCCYNQIILAGDACHRFPPAGGFGMNTGVQDAHNLAWKIASVLKDIAPASILNTYETERKPIAEFNTALSVQNFR 429 (716)
Q Consensus 354 ~~~~~gRV~LvGDAAH~~~P~gG~G~n~gi~DA~~LawkLa~vl~g~a~~~lL~sY~~eRrp~a~~~~~~s~~~~~ 429 (716)
|. .|||+|+|||||.++|++|||+|+||+||.+|+|+|+..+++. .+.+|++|+++|++++..+++.+..+..
T Consensus 276 ~~--~grv~LvGDAAh~~~P~~GqG~~~ai~da~~La~~L~~~~~~~-~~~~L~~Y~~~r~~~~~~~~~~s~~~~~ 348 (394)
T 1k0i_A 276 MQ--HGRLFLAGDAAHIVPPTGAKGLNLAASDVSTLYRLLLKAYREG-RGELLERYSAICLRRIWKAERFSWWMTS 348 (394)
T ss_dssp SE--ETTEEECGGGTEECCGGGTCHHHHHHHHHHHHHHHHHHHHHHC-CGGGGGGHHHHHHHHHHHHHHHHHHHHH
T ss_pred cc--cCCEEEEechhhcCCCcccchHHHHHHHHHHHHHHHHHHhccC-chHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77 4999999999999999999999999999999999999887553 4789999999999999988887765443
No 11
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=100.00 E-value=1.2e-35 Score=327.70 Aligned_cols=346 Identities=20% Similarity=0.243 Sum_probs=217.5
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCC-EEEECCCCCCCCCCCeeeeChhHHHHHHhhhchHHHHHhcCCCccccceeE
Q 005056 41 EAVVPVLIVGAGPVGLVLSILLTKLGIK-CSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFI 119 (716)
Q Consensus 41 ~~~~dVlIVGaGpaGLt~Al~Lar~Gi~-v~liEr~~~~~~~p~a~~i~~rtmeilr~l~Gl~~~l~~~~~~~~~~~~~~ 119 (716)
|.++||+||||||+||++|+.|+++|++ |+||||.+.+...+++..++++++++|+++ |+.+.+.+.+.+... +.
T Consensus 2 ~~~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~~~~g~g~~l~~~~~~~l~~l-g~~~~l~~~~~~~~~---~~ 77 (410)
T 3c96_A 2 SEPIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEIRPLGVGINIQPAAVEALAEL-GLGPALAATAIPTHE---LR 77 (410)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSCCCCSCEEEECHHHHHHHHHT-TCHHHHHHHSEEECE---EE
T ss_pred CCCCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCcccceeEEEEChHHHHHHHHC-CChHHHHhhCCCcce---EE
Confidence 3468999999999999999999999999 999999998877888999999999999999 999999877654322 22
Q ss_pred EeecCCCCceeeccCCCccccccccCCccccccChHHHHHHHHHHHHhc-CceeecccccccccccccccceEEeCcEEE
Q 005056 120 YCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKL-NFKICTSEGTEGLHNHLLQGREILMGHECV 198 (716)
Q Consensus 120 ~~~~~~g~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~-g~~~~~~~~~~~l~~~~~~~~~v~~g~~v~ 198 (716)
+. +..|..+......... ....+...+.|..|++.|.+.+.+. |. ++|+++++|+
T Consensus 78 ~~-~~~g~~~~~~~~~~~~-----~~~~~~~~i~r~~l~~~L~~~~~~~~g~------------------~~v~~~~~v~ 133 (410)
T 3c96_A 78 YI-DQSGATVWSEPRGVEA-----GNAYPQYSIHRGELQMILLAAVRERLGQ------------------QAVRTGLGVE 133 (410)
T ss_dssp EE-CTTSCEEEEEECGGGG-----TCSSCEEEEEHHHHHHHHHHHHHHHHCT------------------TSEEESEEEE
T ss_pred EE-cCCCCEEeeccCCccc-----cCCCCeeeeeHHHHHHHHHHHHHhhCCC------------------cEEEECCEEE
Confidence 22 2334443321110000 0112235688999999999998763 53 3799999999
Q ss_pred EEEecCCeEEEEEEeccCCceeeEEEEecEEEecCCCChhhhhhcCCCccccccccceEEEEEecCccccccccCCCceE
Q 005056 199 SVSATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGSTVRKLVGIDLVGEKDLQKLVSVHFLSKDLGDYLLNERPGML 278 (716)
Q Consensus 199 ~i~~~~~gv~v~v~~~~~g~~~~~~i~ad~VVgADG~~S~VR~~lgi~~~g~~~~~~~~~i~~~~~~l~~~~~~~~~~~~ 278 (716)
++++ +++|++++.+..+|+ ..+++||+||+|||.+|.||+.++....... +.....+.... ....+ .....
T Consensus 134 ~i~~-~~~v~v~~~~~~~g~--~~~~~ad~vV~AdG~~S~vR~~l~~~~~~~~-~~g~~~~~~~~-~~~~~----~~~~~ 204 (410)
T 3c96_A 134 RIEE-RDGRVLIGARDGHGK--PQALGADVLVGADGIHSAVRAHLHPDQRPLS-HGGITMWRGVT-EFDRF----LDGKT 204 (410)
T ss_dssp EEEE-ETTEEEEEEEETTSC--EEEEEESEEEECCCTTCHHHHHHCTTCCCCE-EEEEEEEEEEE-EESCC----TTSSE
T ss_pred EEec-CCccEEEEecCCCCC--ceEEecCEEEECCCccchhHHHhcCCCCCCC-cCCeeEEEeec-ccccc----cCCCe
Confidence 9999 778887776322353 3479999999999999999999975432111 11111111111 00111 11222
Q ss_pred EEEEec--CceEEEEEecC-----CCCe--EEEEEecCC--CCCCCCCCCH-HHHHHHHHHHcCCCCC--ce-eE----E
Q 005056 279 FFIFNT--EAIGVLVAHDL-----KEGE--FILQVPFYP--PQQNLEDFSP-EICEKLIFKLVGWELS--DI-DV----I 339 (716)
Q Consensus 279 ~~~~~~--~~~g~~~~~~~-----~~~~--~~~~~~~~~--~~~~~~~~~~-e~~~~~i~~~~g~~~~--~~-~i----~ 339 (716)
++++.+ ....++++... .... |++..+... .......+.. ....++++.+-++... .+ ++ .
T Consensus 205 ~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~ 284 (410)
T 3c96_A 205 MIVANDEHWSRLVAYPISARHAAEGKSLVNWVCMVPSAAVGQLDNEADWNRDGRLEDVLPFFADWDLGWFDIRDLLTRNQ 284 (410)
T ss_dssp EEEEECTTCCEEEEEECCHHHHTTTCEEEEEEEEEEHHHHCCCCSSCCTTCBCCHHHHHHHHTTCCBTTBCHHHHHHTCS
T ss_pred EEEecCCCCcEEEEEecCCcccCCCCcEEEEEEEecCcccccCCCccccCCCCCHHHHHHHhcCCCCchhHHHHHHhcCc
Confidence 333333 23333333321 1112 222222110 0001112211 1112233322222110 00 00 0
Q ss_pred eeccceech-hhhccceecCCeEEEEccCCccCCCCCCccchhhHhHHHHHHHHHHHHHcCCCchhHHHHHHHHHhHHHH
Q 005056 340 DIKPWVMHA-EVAEKFLCCYNQIILAGDACHRFPPAGGFGMNTGVQDAHNLAWKIASVLKDIAPASILNTYETERKPIAE 418 (716)
Q Consensus 340 ~~~~w~~~~-~~a~~~~~~~gRV~LvGDAAH~~~P~gG~G~n~gi~DA~~LawkLa~vl~g~a~~~lL~sY~~eRrp~a~ 418 (716)
....|.+.. ..+++|. .|||+|+|||||.|+|++|||+|+||+||.+|+|+|+.. ...+.+|++|+++|++++.
T Consensus 285 ~~~~~~~~~~~~~~~~~--~grv~LvGDAAh~~~P~~GqG~n~ai~Da~~La~~L~~~---~~~~~~L~~Ye~~r~~~~~ 359 (410)
T 3c96_A 285 LILQYPMVDRDPLPHWG--RGRITLLGDAAHLMYPMGANGASQAILDGIELAAALARN---ADVAAALREYEEARRPTAN 359 (410)
T ss_dssp EEEEEEEEECCCCSCCC--BTTEEECTHHHHCCCSSTTCTHHHHHHHHHHHHHHHHHC---SSHHHHHHHHHHHHHHHHH
T ss_pred ccceeecccCCCccccc--cCCEEEEecccCCCCCccchhHHHHHHHHHHHHHHHhcc---CCHHHHHHHHHHHHHHHHH
Confidence 112233322 2356776 499999999999999999999999999999999999863 2467899999999999999
Q ss_pred HHHHHHHHHH
Q 005056 419 FNTALSVQNF 428 (716)
Q Consensus 419 ~~~~~s~~~~ 428 (716)
.++..+.+.+
T Consensus 360 ~~~~~s~~~~ 369 (410)
T 3c96_A 360 KIILANRERE 369 (410)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHhHHHH
Confidence 9988877443
No 12
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=100.00 E-value=1.6e-36 Score=333.40 Aligned_cols=341 Identities=19% Similarity=0.222 Sum_probs=230.9
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCCCCCCCeeeeChhHHHHHHhhhchHHHHHhcCCCccccceeEE
Q 005056 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIY 120 (716)
Q Consensus 41 ~~~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~~~~p~a~~i~~rtmeilr~l~Gl~~~l~~~~~~~~~~~~~~~ 120 (716)
+.++||+||||||+||++|+.|+++|++|+||||++.+...+++..++++++++|+++ |+.+.+...+.+.... .+
T Consensus 4 ~~~~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~~~~~~~~~~l~~~~~~~l~~~-g~~~~~~~~~~~~~~~---~~ 79 (399)
T 2x3n_A 4 DNHIDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARRERAINGADLLKPAGIRVVEAA-GLLAEVTRRGGRVRHE---LE 79 (399)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC---CCCCEECHHHHHHHHHT-TCHHHHHHTTCEEECE---EE
T ss_pred CCcCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCCccCceeeECchHHHHHHHc-CcHHHHHHhCCCccee---EE
Confidence 3458999999999999999999999999999999988877888999999999999999 9999988766544321 11
Q ss_pred eecCCCCceeeccCCCccccccccCCccccccChHHHHHHHHHHHHhc-CceeecccccccccccccccceEEeCcEEEE
Q 005056 121 CTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKL-NFKICTSEGTEGLHNHLLQGREILMGHECVS 199 (716)
Q Consensus 121 ~~~~~g~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~-g~~~~~~~~~~~l~~~~~~~~~v~~g~~v~~ 199 (716)
. ...|..+..++... . ..+.....++|..|.+.|.+.+.+. |+ +|+++++|++
T Consensus 80 ~-~~~g~~~~~~~~~~---~---~~~~~~~~~~r~~l~~~L~~~~~~~~gv-------------------~i~~~~~v~~ 133 (399)
T 2x3n_A 80 V-YHDGELLRYFNYSS---V---DARGYFILMPCESLRRLVLEKIDGEATV-------------------EMLFETRIEA 133 (399)
T ss_dssp E-EETTEEEEEEETTS---S---CGGGCEEECCHHHHHHHHHHHHTTCTTE-------------------EEECSCCEEE
T ss_pred E-eCCCCEEEecchHH---h---cccCccccccHHHHHHHHHHHhhhcCCc-------------------EEEcCCEEEE
Confidence 1 12333332222110 0 1122235789999999999999887 66 9999999999
Q ss_pred EEecCCeE--EEEEEeccCCceeeEEEEecEEEecCCCChhhhhhcCCCcccc--ccccceEEEEEecCccccccccCCC
Q 005056 200 VSATDQCI--NVIASFLKEGKCTERNIQCNILIGTDGAGSTVRKLVGIDLVGE--KDLQKLVSVHFLSKDLGDYLLNERP 275 (716)
Q Consensus 200 i~~~~~gv--~v~v~~~~~g~~~~~~i~ad~VVgADG~~S~VR~~lgi~~~g~--~~~~~~~~i~~~~~~l~~~~~~~~~ 275 (716)
+++++++| ++++. +|+ ++++|+||+|||.+|.||+.+|++.... ...+....+.+..+ .. . +.
T Consensus 134 i~~~~~~v~g~v~~~---~g~----~~~ad~vV~AdG~~s~vr~~lg~~~~~~~p~~~~~~~~~~~~~~-~~-~--~~-- 200 (399)
T 2x3n_A 134 VQRDERHAIDQVRLN---DGR----VLRPRVVVGADGIASYVRRRLLDIDVERRPYPSPMLVGTFALAP-CV-A--ER-- 200 (399)
T ss_dssp EEECTTSCEEEEEET---TSC----EEEEEEEEECCCTTCHHHHHTSCCCCCCCCCSSCEEEEEEECCH-HH-H--HC--
T ss_pred EEEcCCceEEEEEEC---CCC----EEECCEEEECCCCChHHHHHhCCCccccCCCCCCceEEEEEEec-CC-C--CC--
Confidence 99988887 66553 453 6899999999999999999998876543 22220022222111 00 0 11
Q ss_pred ceEEEEEec-CceEEEEEecCCCCeEEEEEecCCCC-CCC-CCCCHHHHHHHHHHHcCCCC--CceeEE---eeccceec
Q 005056 276 GMLFFIFNT-EAIGVLVAHDLKEGEFILQVPFYPPQ-QNL-EDFSPEICEKLIFKLVGWEL--SDIDVI---DIKPWVMH 347 (716)
Q Consensus 276 ~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~e~~~~~i~~~~g~~~--~~~~i~---~~~~w~~~ 347 (716)
. . ..+.+ +...++++.+ ++.+.+.+.+.... ... ...+.+.+.+.++.+ +... ..++.. ....|++.
T Consensus 201 ~-~-~~~~~~~~~~~~~p~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 275 (399)
T 2x3n_A 201 N-R-LYVDSQGGLAYFYPIG--FDRARLVVSFPREEARELMADTRGESLRRRLQRF-VGDESAEAIAAVTGTSRFKGIPI 275 (399)
T ss_dssp E-E-EEECTTSCEEEEEEET--TTEEEEEEECCHHHHHHHHHSTTSHHHHHHHHTT-CCGGGHHHHHTCCCSTTCEECCC
T ss_pred c-c-EEEcCCCcEEEEEEcC--CCEEEEEEEeCccccccccccCCHHHHHHHHhhc-CCcchhhHHhcCCccceEEechh
Confidence 1 2 44556 5555555544 25555554221110 000 012334455555532 2211 112111 12335555
Q ss_pred h-hhhccceecCCeEEEEccCCccCCCCCCccchhhHhHHHHHHHHHHHHHc-CCCchhHHHHHHHHHhHHHHHHHHHHH
Q 005056 348 A-EVAEKFLCCYNQIILAGDACHRFPPAGGFGMNTGVQDAHNLAWKIASVLK-DIAPASILNTYETERKPIAEFNTALSV 425 (716)
Q Consensus 348 ~-~~a~~~~~~~gRV~LvGDAAH~~~P~gG~G~n~gi~DA~~LawkLa~vl~-g~a~~~lL~sY~~eRrp~a~~~~~~s~ 425 (716)
. ...++|.. |||+|+|||||.++|++|||+|+||+||.+|+|+|+..++ +...+.+|++|+++|++++..+++.+.
T Consensus 276 ~~~~~~~~~~--~rv~lvGDAAh~~~P~~GqG~~~al~da~~La~~L~~~~~~~~~~~~~l~~Y~~~r~~~~~~~~~~s~ 353 (399)
T 2x3n_A 276 GYLNLDRYWA--DNVAMLGDAIHNVHPITGQGMNLAIEDASALADALDLALRDACALEDALAGYQAERFPVNQAIVSYGH 353 (399)
T ss_dssp CCEECSCSEE--TTEEECGGGTEECCGGGCCHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hccccccccc--CcEEEEechhccCCCcccccHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHHhccHHHHHHHHHH
Confidence 4 56778874 9999999999999999999999999999999999999876 444578999999999999999998887
Q ss_pred HHHHHh
Q 005056 426 QNFRAA 431 (716)
Q Consensus 426 ~~~~~~ 431 (716)
.+.+.+
T Consensus 354 ~~~~~~ 359 (399)
T 2x3n_A 354 ALATSL 359 (399)
T ss_dssp HHHHHT
T ss_pred Hhhhhh
Confidence 655443
No 13
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=100.00 E-value=3.4e-36 Score=330.65 Aligned_cols=335 Identities=16% Similarity=0.164 Sum_probs=212.9
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCC-CCCCCeeeeChhHHHHHHhhhchHHHHHhcCCCccccceeE
Q 005056 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF-STHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFI 119 (716)
Q Consensus 41 ~~~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~-~~~p~a~~i~~rtmeilr~l~Gl~~~l~~~~~~~~~~~~~~ 119 (716)
+.++||+||||||+||++|+.|+++|++|+||||.+.+ ....++..++++++++|+++ |+.+ ...+.+.. ...
T Consensus 3 ~~~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~g~~l~~~~~~~l~~~-g~~~--~~~~~~~~---~~~ 76 (397)
T 2vou_A 3 PTTDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQPLSGFGTGIVVQPELVHYLLEQ-GVEL--DSISVPSS---SME 76 (397)
T ss_dssp CCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCCCCSCEEECCHHHHHHHHHT-TCCG--GGTCBCCC---EEE
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCccccccccChhHHHHHHHc-CCcc--cccccccc---ceE
Confidence 45689999999999999999999999999999999875 44567888999999999999 8876 33333322 122
Q ss_pred EeecCCCCceeeccCCCccccccccCCccccccChHHHHHHHHHHHHhcCceeecccccccccccccccceEEeCcEEEE
Q 005056 120 YCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVS 199 (716)
Q Consensus 120 ~~~~~~g~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~l~~~~~~~~~v~~g~~v~~ 199 (716)
+.....|..+..... + ...+.+..|.+.|.+.+ .++ +|+++++|++
T Consensus 77 ~~~~~~g~~~~~~~~-----------~--~~~~~~~~l~~~L~~~~--~~~-------------------~i~~~~~v~~ 122 (397)
T 2vou_A 77 YVDALTGERVGSVPA-----------D--WRFTSYDSIYGGLYELF--GPE-------------------RYHTSKCLVG 122 (397)
T ss_dssp EEETTTCCEEEEEEC-----------C--CCEEEHHHHHHHHHHHH--CST-------------------TEETTCCEEE
T ss_pred EEecCCCCccccccC-----------c--ccccCHHHHHHHHHHhC--CCc-------------------EEEcCCEEEE
Confidence 222214443322111 1 12356778888888875 244 8999999999
Q ss_pred EEecCCeEEEEEEeccCCceeeEEEEecEEEecCCCChhhhhhcCCCccccccccceEEEEEecC--ccccccccCCCce
Q 005056 200 VSATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGSTVRKLVGIDLVGEKDLQKLVSVHFLSK--DLGDYLLNERPGM 277 (716)
Q Consensus 200 i~~~~~gv~v~v~~~~~g~~~~~~i~ad~VVgADG~~S~VR~~lgi~~~g~~~~~~~~~i~~~~~--~l~~~~~~~~~~~ 277 (716)
++++++++++++. +|+ ++++|+||+|||.+|.||++++ +.. . .+.....+..... ++...........
T Consensus 123 i~~~~~~v~v~~~---~g~----~~~ad~vV~AdG~~S~vr~~~~-~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (397)
T 2vou_A 123 LSQDSETVQMRFS---DGT----KAEANWVIGADGGASVVRKRLL-GIE-P-TYAGYVTWRGVLQPGEVADDVWNYFNDK 192 (397)
T ss_dssp EEECSSCEEEEET---TSC----EEEESEEEECCCTTCHHHHHHH-CCC-C-EEEEEEEEEEEECTTSSCHHHHHHHTTE
T ss_pred EEecCCEEEEEEC---CCC----EEECCEEEECCCcchhHHHHhc-cCC-C-CccceEEEEEEeeccccChhhhhhhcCc
Confidence 9999998877654 453 6899999999999999999998 542 2 1222221111111 1111000000012
Q ss_pred EEEEEecCceEEEEEecCCCC------eEEEEEecCCCC--CCC---------------CCCCHHHHHHHHHHHcC-CCC
Q 005056 278 LFFIFNTEAIGVLVAHDLKEG------EFILQVPFYPPQ--QNL---------------EDFSPEICEKLIFKLVG-WEL 333 (716)
Q Consensus 278 ~~~~~~~~~~g~~~~~~~~~~------~~~~~~~~~~~~--~~~---------------~~~~~e~~~~~i~~~~g-~~~ 333 (716)
..+...++...++++.+..++ .|++..+..... ... ...+++...++++.+.. +.+
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (397)
T 2vou_A 193 FTYGLLDDGHLIAYPIPGRENAESPRLNFQWYWNVAEGPDLDELMTDVRGIRLPTSVHNNSLNPHNLRQFHSKGESLFKP 272 (397)
T ss_dssp EEEEEETTEEEEEEEECCSSTTSCCEEEEEEEEECCTTHHHHHHTBCTTSCBCSSEECGGGCCHHHHHHHHHHHTTSCHH
T ss_pred eeEEecCCCEEEEEECCCCCCccceeEEEEEEecCCCccchhhhccCCCCcccccccCcccCCHHHHHHHHHHHHhhChH
Confidence 223334443333444432222 244444321100 000 00134444444443321 111
Q ss_pred CceeEE----eeccceechhhhccceecCCeEEEEccCCccCCCCCCccchhhHhHHHHHHHHHHHHHcCCCchhHHHHH
Q 005056 334 SDIDVI----DIKPWVMHAEVAEKFLCCYNQIILAGDACHRFPPAGGFGMNTGVQDAHNLAWKIASVLKDIAPASILNTY 409 (716)
Q Consensus 334 ~~~~i~----~~~~w~~~~~~a~~~~~~~gRV~LvGDAAH~~~P~gG~G~n~gi~DA~~LawkLa~vl~g~a~~~lL~sY 409 (716)
-.+++ ....|.+....+++|.. |||+|+|||||.|+|++|||+|+||+||.+|+++|.. +...+.+|++|
T Consensus 273 -~~~~~~~~~~~~~~~~~~~~~~~~~~--grv~LiGDAAH~~~P~~GqG~n~ai~DA~~La~~L~~---~~~~~~~L~~Y 346 (397)
T 2vou_A 273 -FRDLVLNASSPFVTVVADATVDRMVH--GRVLLIGDAAVTPRPHAAAGGAKASDDARTLAEVFTK---NHDLRGSLQSW 346 (397)
T ss_dssp -HHHHHHHCSSCEEEEEEEBCCSCSEE--TTEEECGGGTSBCCGGGSCHHHHHHHHHHHHHHHHHH---CSCHHHHHHHH
T ss_pred -HHHHHhccCCcceeeeeeecCCceec--CcEEEEeccccccCCcchhhHHHHHHHHHHHHHHHhc---CCCHHHHHHHH
Confidence 00000 01124444456678874 9999999999999999999999999999999999974 33457899999
Q ss_pred HHHHhHHHHHHHHHHHHHHHHh
Q 005056 410 ETERKPIAEFNTALSVQNFRAA 431 (716)
Q Consensus 410 ~~eRrp~a~~~~~~s~~~~~~~ 431 (716)
+++|+|++..+++.|..+.+.+
T Consensus 347 e~~R~~~~~~~~~~s~~~~~~~ 368 (397)
T 2vou_A 347 ETRQLQQGHAYLNKVKKMASRL 368 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999887766554
No 14
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=100.00 E-value=6.2e-35 Score=320.74 Aligned_cols=344 Identities=18% Similarity=0.214 Sum_probs=211.7
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCCCCCCC--eeeeCh-hHHHHHHhhhchHHHHHhcCCCccccce
Q 005056 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQ--AHFINN-RYALVFRKLDGLAEEIERSQPPVDLWRK 117 (716)
Q Consensus 41 ~~~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~~~~p~--a~~i~~-rtmeilr~l~Gl~~~l~~~~~~~~~~~~ 117 (716)
++++||+||||||+||++|+.|+++|++|+||||++.+...+. +..+.+ .++++|+++ |+.+++...+.+...
T Consensus 24 ~~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~g~~~~~~~~~~~~~l~~~-gl~~~~~~~~~~~~~--- 99 (398)
T 2xdo_A 24 LSDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDREARIFGGTLDLHKGSGQEAMKKA-GLLQTYYDLALPMGV--- 99 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSSTTCCCCSCCEECCTTTHHHHHHHT-TCHHHHHHHCBCCCE---
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCccccccCCeeeeCCccHHHHHHhc-ChHHHHHHhhcccce---
Confidence 4568999999999999999999999999999999987654433 344544 569999999 999999876654432
Q ss_pred eEEeecCCCCceeeccCCCccccccccCCccccccChHHHHHHHHHHHHhcCceeecccccccccccccccceEEeCcEE
Q 005056 118 FIYCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHEC 197 (716)
Q Consensus 118 ~~~~~~~~g~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~l~~~~~~~~~v~~g~~v 197 (716)
.+ ....|..+.... .+. ........++|..|++.|.+.+.+ . +|+++++|
T Consensus 100 -~~-~~~~g~~~~~~~--~~~-----~~~~~~~~i~r~~l~~~L~~~~~~--~-------------------~i~~~~~v 149 (398)
T 2xdo_A 100 -NI-ADEKGNILSTKN--VKP-----ENRFDNPEINRNDLRAILLNSLEN--D-------------------TVIWDRKL 149 (398)
T ss_dssp -EE-ECSSSEEEEECC--CGG-----GTTSSCCEECHHHHHHHHHHTSCT--T-------------------SEEESCCE
T ss_pred -EE-ECCCCCchhhcc--ccc-----cCCCCCceECHHHHHHHHHhhcCC--C-------------------EEEECCEE
Confidence 11 122343332210 000 001112357899999999887543 2 78999999
Q ss_pred EEEEecCCeEEEEEEeccCCceeeEEEEecEEEecCCCChhhhhhcCCCcccccccc-ceEEEEEecCcc--ccccccCC
Q 005056 198 VSVSATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGSTVRKLVGIDLVGEKDLQ-KLVSVHFLSKDL--GDYLLNER 274 (716)
Q Consensus 198 ~~i~~~~~gv~v~v~~~~~g~~~~~~i~ad~VVgADG~~S~VR~~lgi~~~g~~~~~-~~~~i~~~~~~l--~~~~~~~~ 274 (716)
++++++++++++++. +|+ ++++|+||+|||.+|.||+.++.... .+.. ..+...+...+. ..+.....
T Consensus 150 ~~i~~~~~~v~v~~~---~g~----~~~ad~vV~AdG~~S~vR~~l~~~~~--~~~g~~~~~~~~~~~~~~~~~~~~~~~ 220 (398)
T 2xdo_A 150 VMLEPGKKKWTLTFE---NKP----SETADLVILANGGMSKVRKFVTDTEV--EETGTFNIQADIHQPEINCPGFFQLCN 220 (398)
T ss_dssp EEEEECSSSEEEEET---TSC----CEEESEEEECSCTTCSCCTTTCCCCC--EEEEEEEEEEEESSHHHHSHHHHHHHT
T ss_pred EEEEECCCEEEEEEC---CCc----EEecCEEEECCCcchhHHhhccCCCc--eEcceEEEEEEeCchhccCchhHhhcC
Confidence 999998888877654 453 68999999999999999999864211 1111 111111111000 00000001
Q ss_pred CceEEEEEecCceEEEEEecCCCCeEEEEEecCCCCCC-----CCCCCHHHHHHHHHHHcCCCCCce-eEE----eeccc
Q 005056 275 PGMLFFIFNTEAIGVLVAHDLKEGEFILQVPFYPPQQN-----LEDFSPEICEKLIFKLVGWELSDI-DVI----DIKPW 344 (716)
Q Consensus 275 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~e~~~~~i~~~~g~~~~~~-~i~----~~~~w 344 (716)
.+. .+.+.++...+..+. .++.+.+.+.+..+... ....+++...+.+.+.+..-...+ +++ ....|
T Consensus 221 ~g~-~~~~~~~~~~~~~p~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 297 (398)
T 2xdo_A 221 GNR-LMASHQGNLLFANPN--NNGALHFGISFKTPDEWKNQTQVDFQNRNSVVDFLLKEFSDWDERYKELIHTTLSFVGL 297 (398)
T ss_dssp TSE-EEEEETTEEEEEEEE--ETTEEEEEEEEECCTTC---CCSCTTCHHHHHHHHHHHTTTSCHHHHHHHHHCSCCEEE
T ss_pred Cce-EEEecCCCeEEEEeC--CCCcEEEEEEEecCcccccccccCcCCHHHHHHHHHHHHcCCChHHHHHHhCcccceee
Confidence 222 334455533222222 33444444332222111 111244444444444432210000 000 01112
Q ss_pred eech-hhhccceecCC--eEEEEccCCccCCCCCCccchhhHhHHHHHHHHHHHHHcCCCchhHHHHHHHHHhHHHHHHH
Q 005056 345 VMHA-EVAEKFLCCYN--QIILAGDACHRFPPAGGFGMNTGVQDAHNLAWKIASVLKDIAPASILNTYETERKPIAEFNT 421 (716)
Q Consensus 345 ~~~~-~~a~~~~~~~g--RV~LvGDAAH~~~P~gG~G~n~gi~DA~~LawkLa~vl~g~a~~~lL~sY~~eRrp~a~~~~ 421 (716)
.+.. ....+|.. .+ ||+|+|||||.++|++|||+|+||+||.+|+|+|+.. .+...+.+|++|+++|++++..++
T Consensus 298 ~~~~~~~~~~~~~-~~~~rv~LiGDAAh~~~P~~GqG~n~ai~Da~~La~~L~~~-~~~~~~~~L~~Y~~~r~~~~~~~~ 375 (398)
T 2xdo_A 298 ATRIFPLEKPWKS-KRPLPITMIGDAAHLMPPFAGQGVNSGLVDALILSDNLADG-KFNSIEEAVKNYEQQMFIYGKEAQ 375 (398)
T ss_dssp EEEECCCCSCCCS-CCSSCEEECTHHHHCCCCTTSCSHHHHHHHHHHHHHHHHSC-CSSSHHHHHHHHHHHHHHHHHHHH
T ss_pred eeEeccCCCCccc-CCCccEEEEeehhccCCCccCccHHHHHHHHHHHHHHHHhc-cCchHHHHHHHHHHHHHHHHHHHH
Confidence 2211 12235542 25 9999999999999999999999999999999999864 121147899999999999999999
Q ss_pred HHHHHHHHHhc
Q 005056 422 ALSVQNFRAAM 432 (716)
Q Consensus 422 ~~s~~~~~~~~ 432 (716)
..+..+...++
T Consensus 376 ~~s~~~~~~~~ 386 (398)
T 2xdo_A 376 EESTQNEIEMF 386 (398)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 98888776543
No 15
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=100.00 E-value=1.2e-32 Score=300.50 Aligned_cols=329 Identities=13% Similarity=0.092 Sum_probs=200.7
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCCC-CCCCeeeeChhHHHHHHhhhchHHHHHhcCCCccccceeE
Q 005056 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFS-THPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFI 119 (716)
Q Consensus 41 ~~~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~~-~~p~a~~i~~rtmeilr~l~Gl~~~l~~~~~~~~~~~~~~ 119 (716)
|.++||+||||||+||++|+.|+++|++|+||||++.+. ...++..|+++.+ +.+ |+......... ......
T Consensus 2 Me~yDViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~~~~~~~g~~l~~~~l---~~l-~~~~~~~~~~~---~~~~~~ 74 (397)
T 3oz2_A 2 METYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLSKGIL---NEA-DIKADRSFIAN---EVKGAR 74 (397)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEETHHH---HHT-TCCCCTTTEEE---EESEEE
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCCCCceecccCHHHH---HHc-CCCchhhhhhc---ccceEE
Confidence 456999999999999999999999999999999998763 3456778877654 444 44221111100 011111
Q ss_pred EeecCCCCceeeccCCCccccccccCCccccccChHHHHHHHHHHHHhcCceeecccccccccccccccceEEeCcEEEE
Q 005056 120 YCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVS 199 (716)
Q Consensus 120 ~~~~~~g~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~l~~~~~~~~~v~~g~~v~~ 199 (716)
. .+..+......... ...+...+.++|..|+..|.+.+.+.|+ ++++++++++
T Consensus 75 ~-~~~~~~~~~~~~~~-------~~~~~~~~~i~R~~~~~~L~~~a~~~G~-------------------~~~~~~~v~~ 127 (397)
T 3oz2_A 75 I-YGPSEKRPIILQSE-------KAGNEVGYVLERDKFDKHLAALAAKAGA-------------------DVWVKSPALG 127 (397)
T ss_dssp E-ECTTCSSCEEEECS-------SSSCCCEEEECHHHHHHHHHHHHHHHTC-------------------EEESSCCEEE
T ss_pred E-EeCCCceEeecccc-------ccCCceeEEEEHHHHHHHHHHHHHhcCc-------------------EEeeeeeeee
Confidence 1 11122111111000 0112234578999999999999999987 9999999999
Q ss_pred EEecCCeEEEEEEeccCCceeeEEEEecEEEecCCCChhhhhhcCCCccccccccceEEEEEecCccccccccCCCceEE
Q 005056 200 VSATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGSTVRKLVGIDLVGEKDLQKLVSVHFLSKDLGDYLLNERPGMLF 279 (716)
Q Consensus 200 i~~~~~gv~v~v~~~~~g~~~~~~i~ad~VVgADG~~S~VR~~lgi~~~g~~~~~~~~~i~~~~~~l~~~~~~~~~~~~~ 279 (716)
+.++++.++..... .+++ ..+++||+||+|||.+|.||+++|+.............+.+..... ...+....
T Consensus 128 ~~~~~~~~~~v~~~-~~~~--~~~~~a~~vIgAdG~~S~vr~~~g~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~ 199 (397)
T 3oz2_A 128 VIKENGKVAGAKIR-HNNE--IVDVRAKMVIAADGFESEFGRWAGLKSVILARNDIISALQYRMINV-----DVDPDYTD 199 (397)
T ss_dssp EEEETTEEEEEEEE-ETTE--EEEEEEEEEEECCCTTCHHHHHHTCGGGCCCGGGEEEEEEEEEESC-----CCCTTEEE
T ss_pred eeeccceeeeeeec-cccc--ceEEEEeEEEeCCccccHHHHHcCCCcccccceeeeeeEEEEeecc-----ccCcccce
Confidence 99988887654432 2332 4689999999999999999999998765544433333333322111 11122222
Q ss_pred EEEe---cCceEEEEEecCCCCeEEEEEecCCCCCCCCCCCHHHHHHHHHHHcCCCC--CceeEEe-eccceechhhhcc
Q 005056 280 FIFN---TEAIGVLVAHDLKEGEFILQVPFYPPQQNLEDFSPEICEKLIFKLVGWEL--SDIDVID-IKPWVMHAEVAEK 353 (716)
Q Consensus 280 ~~~~---~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~i~~~~g~~~--~~~~i~~-~~~w~~~~~~a~~ 353 (716)
+.+. |....++.+. .++.+.+.+....... .......+.+.+++...+ ...+... ...+........+
T Consensus 200 ~~~~~~~~~g~~~~~~~--~~~~~~vg~~~~~~~~----~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 273 (397)
T 3oz2_A 200 FYLGSIAPAGYIWVFPK--GEGMANVGIGSSINWI----HNRFELKNYLDRFIENHPGLKKGQDIQLVTGGVSVSKVKMP 273 (397)
T ss_dssp EECSTTSTTEEEEEEEE--ETTEEEEEEEEETTTS----CSHHHHHHHHHHHHHTCHHHHTSEEEEEEEEEEECCCCCSC
T ss_pred eeeeccCCCceEEEeec--ccceeEEEEeeccchh----hhhhhHHHHHHHHHHhCccccccceeeeeeccccccCcccc
Confidence 2222 2223333333 2344444332211110 122233333433322110 0111111 1112122233345
Q ss_pred ceecCCeEEEEccCCccCCCCCCccchhhHhHHHHHHHHHHHHH-cCCCchhHHHHHHHHHhHHHHH
Q 005056 354 FLCCYNQIILAGDACHRFPPAGGFGMNTGVQDAHNLAWKIASVL-KDIAPASILNTYETERKPIAEF 419 (716)
Q Consensus 354 ~~~~~gRV~LvGDAAH~~~P~gG~G~n~gi~DA~~LawkLa~vl-~g~a~~~lL~sY~~eRrp~a~~ 419 (716)
+. .+||+|+|||||.++|++|||+|+||+|+..||+.|+..+ ++...+.+|+.|+++++.....
T Consensus 274 ~~--~~~v~lvGDAA~~~~P~~G~Gi~~A~~~g~~~A~~i~~~l~~~~~~~~~L~~Ye~~~~~~~~~ 338 (397)
T 3oz2_A 274 IT--MPGLMLVGDAARLIDPITGGGIANAIVSGMYAAQVTKEAIESNDYSPQMMQKYEKLIKERFER 338 (397)
T ss_dssp CE--ETTEEECGGGGTCSCTTTCCCHHHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHHHHH
T ss_pred ee--eeeEEEcccccccCCCCcchhHHHHHHHHHHHHHHHHHHHHcCCccHHHHHHHHHHHHHHHHH
Confidence 55 4899999999999999999999999999999999999877 4566789999999998876543
No 16
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=100.00 E-value=1.6e-33 Score=307.36 Aligned_cols=323 Identities=15% Similarity=0.176 Sum_probs=210.9
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCCCCCCCeeeeChhHHHHHHhhhchHHHHHhcCCCccccceeEE
Q 005056 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIY 120 (716)
Q Consensus 41 ~~~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~~~~p~a~~i~~rtmeilr~l~Gl~~~l~~~~~~~~~~~~~~~ 120 (716)
|..+||+||||||+||++|+.|+++|++|+||||++.+...+++..++++++++|+++ |+.+.+...+.+... +.+
T Consensus 9 m~~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~~~~~~~~~l~~~~~~~l~~~-g~~~~~~~~~~~~~~---~~~ 84 (379)
T 3alj_A 9 GKTRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRAFGAGIYLWHNGLRVLEGL-GALDDVLQGSHTPPT---YET 84 (379)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSCCCCSSEEEEEHHHHHHHHHT-TCHHHHHTTCBCCSC---EEE
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCCCCceEEeCccHHHHHHHc-CCHHHHHhhCCCccc---eEE
Confidence 3468999999999999999999999999999999998877889999999999999999 999999877655432 222
Q ss_pred eecCCCCceeeccCCCccccccccCCccccccChHHHHHHHHHHHHhcCceeecccccccccccccccceEEeCcEEEEE
Q 005056 121 CTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSV 200 (716)
Q Consensus 121 ~~~~~g~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~l~~~~~~~~~v~~g~~v~~i 200 (716)
... |..+...+.. ..+...++|..|+..|.+.+.+.|+ +|+++++|+++
T Consensus 85 ~~~--g~~~~~~~~~----------~~~~~~~~r~~l~~~L~~~~~~~gv-------------------~i~~~~~v~~i 133 (379)
T 3alj_A 85 WMH--NKSVSKETFN----------GLPWRIMTRSHLHDALVNRARALGV-------------------DISVNSEAVAA 133 (379)
T ss_dssp EET--TEEEEEECGG----------GCCEEEEEHHHHHHHHHHHHHHTTC-------------------EEESSCCEEEE
T ss_pred EeC--CceeeeccCC----------CCceEEECHHHHHHHHHHHHHhcCC-------------------EEEeCCEEEEE
Confidence 222 4443322110 1124678899999999999998877 99999999999
Q ss_pred EecCCeEEEEEEeccCCceeeEEEEecEEEecCCCChhhhhhcCCCccccccccceEEEEEecCccccc-cccCCCceEE
Q 005056 201 SATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGSTVRKLVGIDLVGEKDLQKLVSVHFLSKDLGDY-LLNERPGMLF 279 (716)
Q Consensus 201 ~~~~~gv~v~v~~~~~g~~~~~~i~ad~VVgADG~~S~VR~~lgi~~~g~~~~~~~~~i~~~~~~l~~~-~~~~~~~~~~ 279 (716)
++ ++ ++++. +|+ ++++|+||+|||.+|.+|+.+++... ... .....+.+..+ .... .....+...+
T Consensus 134 ~~--~~-~v~~~---~g~----~~~ad~vV~AdG~~s~vr~~l~~~~~-~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~ 200 (379)
T 3alj_A 134 DP--VG-RLTLQ---TGE----VLEADLIVGADGVGSKVRDSIGFKQD-RWV-SKDGLIRLIVP-RMKKELGHGEWDNTI 200 (379)
T ss_dssp ET--TT-EEEET---TSC----EEECSEEEECCCTTCHHHHHHCCCEE-EEE-EEEEEEEEEEE-CCHHHHCSSCTTSEE
T ss_pred Ee--CC-EEEEC---CCC----EEEcCEEEECCCccHHHHHHhcCCCC-cCc-CCcEEEEEEec-hhhccCCcCCccccc
Confidence 88 34 55543 453 68999999999999999999986422 111 11111111111 0000 0000011111
Q ss_pred E---EEecCceEEEEEecCCCCeEEEEEecCCCC---CCCCCCCHHH---HH---HHHHHHcCCCCCceeEEeeccceec
Q 005056 280 F---IFNTEAIGVLVAHDLKEGEFILQVPFYPPQ---QNLEDFSPEI---CE---KLIFKLVGWELSDIDVIDIKPWVMH 347 (716)
Q Consensus 280 ~---~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~e~---~~---~~i~~~~g~~~~~~~i~~~~~w~~~ 347 (716)
. .+.++...++++. .++...+.+.+.... +.+.+.-.+. +. +++...-... ...|.+.
T Consensus 201 ~~~~~~~~~~~~~~~p~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~--------~~~~~~~ 270 (379)
T 3alj_A 201 DMWNFWPRVQRILYSPC--NENELYLGLMAPAADPRGSSVPIDLEVWVEMFPFLEPCLIEAAKLK--------TARYDKY 270 (379)
T ss_dssp EEECCSSSCCEEEEEEC--SSSEEEEEEEECTTCTTTTCSSCCHHHHHHHCGGGHHHHHHHHTCT--------TCCEEEE
T ss_pred ccceEECCCCEEEEEEC--CCCcEEEEEEecCCCCCHHHHHHHHhcCCchhccHHHHHhhCCccc--------eEEeccc
Confidence 1 2344444444443 344433333322211 1111111110 01 2222211011 1223332
Q ss_pred h-hhhccceecCCeEEEEccCCccCCCCCCccchhhHhHHHHHHHHHHHHHcCCCchhHHHHHHHHHhHHHHHHHHHHHH
Q 005056 348 A-EVAEKFLCCYNQIILAGDACHRFPPAGGFGMNTGVQDAHNLAWKIASVLKDIAPASILNTYETERKPIAEFNTALSVQ 426 (716)
Q Consensus 348 ~-~~a~~~~~~~gRV~LvGDAAH~~~P~gG~G~n~gi~DA~~LawkLa~vl~g~a~~~lL~sY~~eRrp~a~~~~~~s~~ 426 (716)
. ..+++|. .|||+|+|||||.++|++|||+|+||+||.+|+|+|+. ....+.+|++|+++|++++..+++.+..
T Consensus 271 ~~~~~~~~~--~~rv~lvGDAAh~~~P~~GqG~~~ai~da~~La~~L~~---~~~~~~~l~~Y~~~r~~~~~~~~~~s~~ 345 (379)
T 3alj_A 271 ETTKLDSWT--RGKVALVGDAAHAMCPALAQGAGCAMVNAFSLSQDLEE---GSSVEDALVAWETRIRPITDRCQALSGD 345 (379)
T ss_dssp EEEEESCSE--ETTEEECTHHHHCCCGGGSCHHHHHHHHHHHHHHHTTS---SSCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCCcc--cCcEEEEEcccCCCCcchhhhHHHHHHHHHHHHHHhcc---ccCHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 2 2356776 49999999999999999999999999999999999974 2234789999999999999999988843
No 17
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=99.98 E-value=4.1e-31 Score=299.81 Aligned_cols=349 Identities=15% Similarity=0.145 Sum_probs=219.9
Q ss_pred CCccCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCCCCCCCeeeeChhHHH-HHHhhhchHHHHHhcCCCcccccee
Q 005056 40 NEAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYAL-VFRKLDGLAEEIERSQPPVDLWRKF 118 (716)
Q Consensus 40 ~~~~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~~~~p~a~~i~~rtme-ilr~l~Gl~~~l~~~~~~~~~~~~~ 118 (716)
++.++||+||||||+||++|+.|+++|++|+||||.+.+... .+..+.+.++. +++.+ |+.+.+...+.+......+
T Consensus 4 ~~~~~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~-~g~~~~~~~~~~~l~~l-gl~~~~~~~~~~~~~~~~~ 81 (512)
T 3e1t_A 4 RPEVFDLIVIGGGPGGSTLASFVAMRGHRVLLLEREAFPRHQ-IGESLLPATVHGICAML-GLTDEMKRAGFPIKRGGTF 81 (512)
T ss_dssp -CEEEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCCC-SCCBCCHHHHTTHHHHT-TCHHHHHTTTCCEECEEEE
T ss_pred CCccCCEEEECcCHHHHHHHHHHHhCCCCEEEEccCCCCCCC-CCcccCcchHHHHHHHh-CcHHHHHHcCCccccCceE
Confidence 355689999999999999999999999999999999865443 35566777664 89998 9999998776554332222
Q ss_pred EEeecCCCCceeeccCCCccccccccCCccccccChHHHHHHHHHHHHhcCceeecccccccccccccccceEEeCcEEE
Q 005056 119 IYCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECV 198 (716)
Q Consensus 119 ~~~~~~~g~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~l~~~~~~~~~v~~g~~v~ 198 (716)
.+.. ..... ........ .......+++++..|.+.|.+.+.+.|+ +|+++++|+
T Consensus 82 ~~~~--~~~~~-~~~~~~~~----~~~~~~~~~v~r~~l~~~L~~~a~~~Gv-------------------~i~~~~~V~ 135 (512)
T 3e1t_A 82 RWGK--EPEPW-TFGFTRHP----DDPYGFAYQVERARFDDMLLRNSERKGV-------------------DVRERHEVI 135 (512)
T ss_dssp ECSS--CSSCE-EEESSSSS----SSTTCCEEBCCHHHHHHHHHHHHHHTTC-------------------EEESSCEEE
T ss_pred EecC--Ccccc-ccccccCC----CCCcceeeEecHHHHHHHHHHHHHhCCC-------------------EEEcCCEEE
Confidence 2111 11110 00110000 0112234678999999999999998887 999999999
Q ss_pred EEEecCCeEE-EEEEeccCCceeeEEEEecEEEecCCCChhhhhhcCCCccccccccceEEEEEecCccccccccCCCce
Q 005056 199 SVSATDQCIN-VIASFLKEGKCTERNIQCNILIGTDGAGSTVRKLVGIDLVGEKDLQKLVSVHFLSKDLGDYLLNERPGM 277 (716)
Q Consensus 199 ~i~~~~~gv~-v~v~~~~~g~~~~~~i~ad~VVgADG~~S~VR~~lgi~~~g~~~~~~~~~i~~~~~~l~~~~~~~~~~~ 277 (716)
+++++++.++ +++.+ .+|+ ..+++||+||+|||.+|.+|+++|+...........+...+.... .. .......
T Consensus 136 ~v~~~~~~v~gv~~~~-~dG~--~~~i~ad~VI~AdG~~S~vr~~lg~~~~~~~~~~~a~~~~~~~~~--~~-~~~~~~~ 209 (512)
T 3e1t_A 136 DVLFEGERAVGVRYRN-TEGV--ELMAHARFIVDASGNRTRVSQAVGERVYSRFFQNVALYGYFENGK--RL-PAPRQGN 209 (512)
T ss_dssp EEEEETTEEEEEEEEC-SSSC--EEEEEEEEEEECCCTTCSSGGGTCCEEECSTTCEEEEEEEEESCC--CC-STTCTTS
T ss_pred EEEEECCEEEEEEEEe-CCCC--EEEEEcCEEEECCCcchHHHHHcCCCccCchhcceEEEEEecCCc--cC-CCCCcCc
Confidence 9999888765 55543 2443 358999999999999999999997654322222222222332211 00 1111222
Q ss_pred EEEEEecCceEEEEEecCCCCeEEEEEecCCCC-CCCCCCCHHHHHHHHH------HHcCCCC-------CceeEEeecc
Q 005056 278 LFFIFNTEAIGVLVAHDLKEGEFILQVPFYPPQ-QNLEDFSPEICEKLIF------KLVGWEL-------SDIDVIDIKP 343 (716)
Q Consensus 278 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~e~~~~~i~------~~~g~~~-------~~~~i~~~~~ 343 (716)
.+..+.+.+..++++ ..++...+.+.+.... .......++.+.++++ +.+.... ..+.+. ..
T Consensus 210 ~~~~~~~~G~~~~~P--l~~~~~~vg~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~l~~~~~~~~~~~~~i~~~--~~ 285 (512)
T 3e1t_A 210 ILSAAFQDGWFWYIP--LSDTLTSVGAVVSREAAEAIKDGHEAALLRYIDRCPIIKEYLAPATRVTTGDYGEIRIR--KD 285 (512)
T ss_dssp EEEEEETTEEEEEEE--CSSSEEEEEEEEEHHHHTTTSSCHHHHHHHHHHTSHHHHHHHTTCEECCSSTTSSCEEE--ES
T ss_pred eEEEEeCCceEEEEE--eCCCeEEEEEEecHHHhhhhcCCHHHHHHHHHHhCchHHHHHhcCccccccccccceee--cc
Confidence 333444544334444 3444443332221110 1111122333443332 2222110 011111 11
Q ss_pred ceechhhhccceecCCeEEEEccCCccCCCCCCccchhhHhHHHHHHHHHHHHHcCCC-chhHHHHHHHHHhHHHHHHHH
Q 005056 344 WVMHAEVAEKFLCCYNQIILAGDACHRFPPAGGFGMNTGVQDAHNLAWKIASVLKDIA-PASILNTYETERKPIAEFNTA 422 (716)
Q Consensus 344 w~~~~~~a~~~~~~~gRV~LvGDAAH~~~P~gG~G~n~gi~DA~~LawkLa~vl~g~a-~~~lL~sY~~eRrp~a~~~~~ 422 (716)
| .....+|. .+||+|+|||||.++|+.|||+|+||+||..|+++|...+++.. .+.+|+.|+++|++....+.+
T Consensus 286 ~---~~~~~~~~--~~~vvlvGDAAh~~~P~~GqG~~~Al~dA~~La~~L~~~l~~~~~~~~aL~~Ye~~~~~~~~~~~~ 360 (512)
T 3e1t_A 286 Y---SYCNTSFW--KNGMALVGDAACFVDPVFSSGVHLATYSALLVARAINTCLAGEMSEQRCFEEFERRYRREYGNFYQ 360 (512)
T ss_dssp C---CEEESCSB--CSSEEECGGGTEECCSTTCCHHHHHHHHHHHHHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred c---cccccccc--cCCEEEEechhhcCCCccccCHHHHHHHHHHHHHHHHHHHcCCccHHHHHHHHHHHHHHHHHHHHH
Confidence 1 11334555 48999999999999999999999999999999999999887653 357899999999999998888
Q ss_pred HHHHHHHHh
Q 005056 423 LSVQNFRAA 431 (716)
Q Consensus 423 ~s~~~~~~~ 431 (716)
.....|...
T Consensus 361 ~~~~~y~~~ 369 (512)
T 3e1t_A 361 FLVAFYDMN 369 (512)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHhhh
Confidence 777666543
No 18
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=99.98 E-value=5e-31 Score=288.67 Aligned_cols=337 Identities=12% Similarity=0.097 Sum_probs=209.0
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCCCC-CCCeeeeChhHHHHHHhhhchHHHHHhcCCCccccceeE
Q 005056 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFST-HPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFI 119 (716)
Q Consensus 41 ~~~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~~~-~p~a~~i~~rtmeilr~l~Gl~~~l~~~~~~~~~~~~~~ 119 (716)
|.++||+||||||+||++|+.|+++|++|+||||++.+.. ..++..+++ ++++.+ |+++...... ..+....
T Consensus 2 m~~~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~~~g~~~~~~~~~~~---~~~~~l-g~~~~~~~~~---~~~~~~~ 74 (397)
T 3cgv_A 2 METYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLSK---GILNEA-DIKADRSFIA---NEVKGAR 74 (397)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEET---HHHHHT-TCCCCTTTEE---EEESEEE
T ss_pred CccCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCcccccccCH---HHHHHc-CCCCChHHhh---hhcceEE
Confidence 3468999999999999999999999999999999986533 445555554 556666 6633211110 1111111
Q ss_pred EeecCCCCceeeccCCCccccccccCCccccccChHHHHHHHHHHHHhcCceeecccccccccccccccceEEeCcEEEE
Q 005056 120 YCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVS 199 (716)
Q Consensus 120 ~~~~~~g~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~l~~~~~~~~~v~~g~~v~~ 199 (716)
+ ....+.....+... . ..+...+.+++..|.+.|.+.+.+.|+ +|+++++|++
T Consensus 75 ~-~~~~~~~~~~~~~~---~----~~~~~~~~~~~~~l~~~L~~~~~~~gv-------------------~i~~~~~v~~ 127 (397)
T 3cgv_A 75 I-YGPSEKRPIILQSE---K----AGNEVGYVLERDKFDKHLAALAAKAGA-------------------DVWVKSPALG 127 (397)
T ss_dssp E-ECTTCSSCEEEC------------CCCEEEECHHHHHHHHHHHHHHHTC-------------------EEESSCCEEE
T ss_pred E-EcCCCCEEEEEecc---c----cCCceeEEEeHHHHHHHHHHHHHhCCC-------------------EEEECCEEEE
Confidence 1 11222220111100 0 012234578999999999999999887 9999999999
Q ss_pred EEecCCeEE-EEEEeccCCceeeEEEEecEEEecCCCChhhhhhcCCCc-cccccccceEEEEEecCccccccccCCCce
Q 005056 200 VSATDQCIN-VIASFLKEGKCTERNIQCNILIGTDGAGSTVRKLVGIDL-VGEKDLQKLVSVHFLSKDLGDYLLNERPGM 277 (716)
Q Consensus 200 i~~~~~gv~-v~v~~~~~g~~~~~~i~ad~VVgADG~~S~VR~~lgi~~-~g~~~~~~~~~i~~~~~~l~~~~~~~~~~~ 277 (716)
++.+++.++ +++.. .+. ..+++||+||+|||.+|.+|+.+|++. ..... .....+.+..... ...+..
T Consensus 128 i~~~~~~v~gv~~~~--~~~--~~~~~a~~vV~A~G~~s~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~-----~~~~~~ 197 (397)
T 3cgv_A 128 VIKENGKVAGAKIRH--NNE--IVDVRAKMVIAADGFESEFGRWAGLKSVILARN-DIISALQYRMINV-----DVDPDY 197 (397)
T ss_dssp EEEETTEEEEEEEEE--TTE--EEEEEEEEEEECCCTTCHHHHHHTCCTTCCCGG-GEEEEEEEEEESC-----CCCTTE
T ss_pred EEEeCCEEEEEEEEE--CCe--EEEEEcCEEEECCCcchHhHHhcCCCccCCChh-heeEEEEEEeccC-----CCCCCc
Confidence 999988877 66653 222 358999999999999999999998766 32111 1111122221110 011223
Q ss_pred EEEEE---ecCceEEEEEecCCCCeEEEEEecCCCCCCCCCCCHHHHHHHHHHHcCC----CCCceeEEeeccceechhh
Q 005056 278 LFFIF---NTEAIGVLVAHDLKEGEFILQVPFYPPQQNLEDFSPEICEKLIFKLVGW----ELSDIDVIDIKPWVMHAEV 350 (716)
Q Consensus 278 ~~~~~---~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~i~~~~g~----~~~~~~i~~~~~w~~~~~~ 350 (716)
..+.+ .++...++++.. ++.+.+.+.+..... .......+.+++++.. ....+.......+++. ..
T Consensus 198 ~~~~~~~~~~~g~~~~~P~~--~~~~~vg~~~~~~~~----~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~-~~ 270 (397)
T 3cgv_A 198 TDFYLGSIAPAGYIWVFPKG--EGMANVGIGSSINWI----HNRFELKNYLDRFIENHPGLKKGQDIQLVTGGVSVS-KV 270 (397)
T ss_dssp EEEECSTTSTTEEEEEEEEE--TTEEEEEEEEETTTC----SCHHHHHHHHHHHHHTCHHHHTSEEEEEEEEEEECC-CC
T ss_pred EEEEeCCcCCCceEEEEECC--CCeEEEEEEeccccc----cCCCCHHHHHHHHHHhCcCCCCCeEEeeeeeeeecC-CC
Confidence 33333 233334444443 344444333222211 1222333334333322 1122222222233332 34
Q ss_pred hccceecCCeEEEEccCCccCCCCCCccchhhHhHHHHHHHHHHHHH-cCCCchhHHHHHHHHHhHHHHHHHHHHHHHHH
Q 005056 351 AEKFLCCYNQIILAGDACHRFPPAGGFGMNTGVQDAHNLAWKIASVL-KDIAPASILNTYETERKPIAEFNTALSVQNFR 429 (716)
Q Consensus 351 a~~~~~~~gRV~LvGDAAH~~~P~gG~G~n~gi~DA~~LawkLa~vl-~g~a~~~lL~sY~~eRrp~a~~~~~~s~~~~~ 429 (716)
.++|. .+||+|+|||||.++|+.|+|+|+|++||..|+++|+..+ ++...+.+|+.|+++|++......+.+....+
T Consensus 271 ~~~~~--~~~v~liGDAa~~~~P~~G~G~~~a~~~a~~la~~l~~~~~~~~~~~~~l~~Y~~~~~~~~~~~~~~~~~~~~ 348 (397)
T 3cgv_A 271 KMPIT--MPGLMLVGDAARLIDPITGGGIANAIVSGMYAAQVTKEAIESNDYSPQMMQKYEKLIKERFERKHLRNWVAKE 348 (397)
T ss_dssp CSCCE--ETTEEECGGGGTCSCTTTCCCHHHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccee--eCCEEEEEccccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56666 3899999999999999999999999999999999999877 56667889999999999988777776655443
Q ss_pred H
Q 005056 430 A 430 (716)
Q Consensus 430 ~ 430 (716)
.
T Consensus 349 ~ 349 (397)
T 3cgv_A 349 K 349 (397)
T ss_dssp H
T ss_pred H
Confidence 3
No 19
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=99.98 E-value=1.5e-32 Score=299.89 Aligned_cols=320 Identities=14% Similarity=0.088 Sum_probs=201.2
Q ss_pred CCEEEECCCHHHHHHHHHHHhC--CCCEEEECCCCCCCCCCCeeeeChhHHHHHHhhhchH-HH-HHhcCCCccccceeE
Q 005056 44 VPVLIVGAGPVGLVLSILLTKL--GIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLA-EE-IERSQPPVDLWRKFI 119 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar~--Gi~v~liEr~~~~~~~p~a~~i~~rtmeilr~l~Gl~-~~-l~~~~~~~~~~~~~~ 119 (716)
.||+||||||+||++|+.|+++ |++|+||||++.+...+++..+++++++.+... ++. +. +.....+. ....
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~---~~~~ 76 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQEVLGWGVVLPGRPGQHPANP-LSYLDAPERLNPQFL---EDFK 76 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTTCCCCSEEEEESCTTTCTTCG-GGGSSCGGGGCCEEE---CCEE
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCCCcceeEEEeCcHHHHhhcCc-chhhhhhHHHhhccc---cceE
Confidence 3799999999999999999999 999999999998877888999998887733332 443 33 32222111 1122
Q ss_pred EeecCCCCceeeccCCCccccccccCCccccccChHHHHHHHHHHHHhcCceeecccccccccccccccceEEeCcEEEE
Q 005056 120 YCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVS 199 (716)
Q Consensus 120 ~~~~~~g~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~l~~~~~~~~~v~~g~~v~~ 199 (716)
+.. .|..+.. ........+.|..|.+.|.+.+.+.|+ +|+++++|++
T Consensus 77 ~~~--~g~~~~~------------~~~~~~~~~~r~~l~~~L~~~~~~~gv-------------------~i~~~~~v~~ 123 (381)
T 3c4a_A 77 LVH--HNEPSLM------------STGVLLCGVERRGLVHALRDKCRSQGI-------------------AIRFESPLLE 123 (381)
T ss_dssp EEE--SSSEEEC------------CCCSCEEEEEHHHHHHHHHHHHHHTTC-------------------EEETTCCCCS
T ss_pred EEe--CCeeEEe------------cCCCceeeecHHHHHHHHHHHHHHCCC-------------------EEEeCCEecc
Confidence 221 2332210 001123467899999999999998887 8999999988
Q ss_pred EEecCCeEEEEEEeccCCceeeEEEEecEEEecCCCChhhhhhc----CCCccccccccceEEEEEecCccccccccCCC
Q 005056 200 VSATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGSTVRKLV----GIDLVGEKDLQKLVSVHFLSKDLGDYLLNERP 275 (716)
Q Consensus 200 i~~~~~gv~v~v~~~~~g~~~~~~i~ad~VVgADG~~S~VR~~l----gi~~~g~~~~~~~~~i~~~~~~l~~~~~~~~~ 275 (716)
+++. . ++++|+||+|||.+|. |+.+ ++...... .. ..+..... ....
T Consensus 124 i~~~-------------~-----~~~ad~vV~AdG~~S~-R~~l~~~~g~~~~~~~---~~--~~~~~~~~-----~~~~ 174 (381)
T 3c4a_A 124 HGEL-------------P-----LADYDLVVLANGVNHK-TAHFTEALVPQVDYGR---NK--YIWYGTSQ-----LFDQ 174 (381)
T ss_dssp GGGC-------------C-----GGGCSEEEECCGGGGG-TCCSSGGGCCCCEEEE---EE--EEEEEESS-----CCSS
T ss_pred chhc-------------c-----cccCCEEEECCCCCch-HHhhhhhcCCCcccCC---cc--EEEEecCC-----CCCc
Confidence 7642 0 2369999999999999 9987 33322110 11 11111000 0011
Q ss_pred ceEEEEEecCceEEEEEecCCCCeEEEEEecCCCC---CCCCCCCHHHHHHHHHHHcCCCCCceeEEeec--cceec-hh
Q 005056 276 GMLFFIFNTEAIGVLVAHDLKEGEFILQVPFYPPQ---QNLEDFSPEICEKLIFKLVGWELSDIDVIDIK--PWVMH-AE 349 (716)
Q Consensus 276 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~e~~~~~i~~~~g~~~~~~~i~~~~--~w~~~-~~ 349 (716)
...++.+.+.+..++...+..++.+.+.+...+.. ..+..++++...+.+++.++......+++... .|... ..
T Consensus 175 ~~~~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~ 254 (381)
T 3c4a_A 175 MNLVFRTHGKDIFIAHAYKYSDTMSTFIVECSEETYARARLGEMSEEASAEYVAKVFQAELGGHGLVSQPGLGWRNFMTL 254 (381)
T ss_dssp EEEEEEEETTEEEEEEEEECSSSCEEEEEEECHHHHHHTTSSSSCHHHHHHHHHHHTHHHHTTCCCBCCTTTCSEEEEEC
T ss_pred ceeeEeeCCCcEEEEEEEEecCCeEEEEEECCccccccCCcccCChHHHHHHHHHHhcccCCCchhhcCCCcceeeeccc
Confidence 11222222332222222333334444433321110 22334565555555554432110112222221 35543 34
Q ss_pred hhccceecCCeEEEEccCCccCCCCCCccchhhHhHHHHHHHHHHHHHcCCCchhHHHHHHHHHhHHHHHHHHHHHHHHH
Q 005056 350 VAEKFLCCYNQIILAGDACHRFPPAGGFGMNTGVQDAHNLAWKIASVLKDIAPASILNTYETERKPIAEFNTALSVQNFR 429 (716)
Q Consensus 350 ~a~~~~~~~gRV~LvGDAAH~~~P~gG~G~n~gi~DA~~LawkLa~vl~g~a~~~lL~sY~~eRrp~a~~~~~~s~~~~~ 429 (716)
.+++|.. |||+|+|||||.|+|++|||+|+||+||.+|||+|+.. ...+.+|++|+++|++++..++..+..+.+
T Consensus 255 ~~~~~~~--grv~LvGDAAh~~~P~~GqG~~~al~Da~~La~~L~~~---~~~~~aL~~Y~~~r~~~~~~~~~~s~~~~~ 329 (381)
T 3c4a_A 255 SHDRCHD--GKLVLLGDALQSGHFSIGHGTTMAVVVAQLLVKALCTE---DGVPAALKRFEERALPLVQLFRGHADNSRV 329 (381)
T ss_dssp CCSCSEE--TTEEECGGGTCCCCGGGCCHHHHHHHHHHHHHHHHHHS---SSHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCccc--CCEEEEEccccccCCCccccHHHHHHHHHHHHHHHhcc---ccHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 5678874 99999999999999999999999999999999999873 345789999999999999999998877766
Q ss_pred Hhccc
Q 005056 430 AAMEV 434 (716)
Q Consensus 430 ~~~~~ 434 (716)
.+...
T Consensus 330 ~~~~~ 334 (381)
T 3c4a_A 330 WFETV 334 (381)
T ss_dssp HHHTC
T ss_pred hhhch
Confidence 55443
No 20
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=99.98 E-value=5.8e-30 Score=282.85 Aligned_cols=339 Identities=14% Similarity=0.121 Sum_probs=216.9
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCCCCCCCeeeeChhHHHHHHhhhchHHHHHhcCCCccccceeEE
Q 005056 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIY 120 (716)
Q Consensus 41 ~~~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~~~~p~a~~i~~rtmeilr~l~Gl~~~l~~~~~~~~~~~~~~~ 120 (716)
+.++||+||||||+||++|+.|+++|++|+||||.+.+. ...+..++++++++++++ |+.+.+.+.+.+......+
T Consensus 3 ~~~~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~~~~-~~~g~~~~~~~~~~l~~~-g~~~~~~~~~~~~~~~~~~-- 78 (421)
T 3nix_A 3 REKVDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQKFPR-FVIGESLLPRCMEHLDEA-GFLDAVKAQGFQQKFGAKF-- 78 (421)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSC-CCSCCBCCGGGHHHHHHT-TCHHHHHHTTCEEECEEEE--
T ss_pred CccCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCC-CcccCcccHhHHHHHHHc-CChHHHHHcCCcccCCcEE--
Confidence 456899999999999999999999999999999997654 356788999999999999 9999998876543221111
Q ss_pred eecCCCCceeeccCCCccccccccCCccccccChHHHHHHHHHHHHhcCceeecccccccccccccccceEEeCcEEEEE
Q 005056 121 CTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSV 200 (716)
Q Consensus 121 ~~~~~g~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~l~~~~~~~~~v~~g~~v~~i 200 (716)
.. +.....++.... .. ..+.....+++..|.+.|.+.+.+.|+ +|+++++|+++
T Consensus 79 ~~---~~~~~~~~~~~~--~~--~~~~~~~~~~r~~~~~~L~~~a~~~gv-------------------~i~~~~~v~~i 132 (421)
T 3nix_A 79 VR---GKEIADFNFSDQ--FS--NGWNWTWQVPRGNFDKTLADEAARQGV-------------------DVEYEVGVTDI 132 (421)
T ss_dssp EE---TTEEEEEETTSC--SS--CSCCCEEECCHHHHHHHHHHHHHHHTC-------------------EEECSEEEEEE
T ss_pred Ee---CCeeEEEeehhh--cC--CCCCceeEECHHHHHHHHHHHHHhCCC-------------------EEEcCCEEEEE
Confidence 11 112211111110 00 112234578999999999999999887 99999999999
Q ss_pred EecCCeEEEEEEeccCCceeeEEEEecEEEecCCCChhhhhhcCCCccccccccceEEEEEecCccccccccCCCceEEE
Q 005056 201 SATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGSTVRKLVGIDLVGEKDLQKLVSVHFLSKDLGDYLLNERPGMLFF 280 (716)
Q Consensus 201 ~~~~~gv~v~v~~~~~g~~~~~~i~ad~VVgADG~~S~VR~~lgi~~~g~~~~~~~~~i~~~~~~l~~~~~~~~~~~~~~ 280 (716)
+.+++++.+++.. .+|+ ..+++||+||+|||.+|.+|+.++++..........+...+......... . .....++
T Consensus 133 ~~~~~~~~v~v~~-~~g~--~~~~~a~~vV~A~G~~s~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~ 207 (421)
T 3nix_A 133 KFFGTDSVTTIED-INGN--KREIEARFIIDASGYGRVIPRMFGLDKPSGFESRRTLFTHIKDVKRPVAA-E-MEGNRIT 207 (421)
T ss_dssp EEETTEEEEEEEE-TTSC--EEEEEEEEEEECCGGGCHHHHHTTCEECCSSCCCEEEEEEEECTTCCC------CCSEEE
T ss_pred EEeCCEEEEEEEc-CCCC--EEEEEcCEEEECCCCchhhHHhcCCCCCCcCCCcEEEEEEECCCcCCCcc-C-CCCeEEE
Confidence 9998888777764 3443 45799999999999999999999987665444444444444321111000 0 1112222
Q ss_pred EEecCceEEEEEecCCCCeEEEEEecCCCC-CCCCCCCHHHHHHHHHHH------cCCCCCceeEEeeccceechhhhcc
Q 005056 281 IFNTEAIGVLVAHDLKEGEFILQVPFYPPQ-QNLEDFSPEICEKLIFKL------VGWELSDIDVIDIKPWVMHAEVAEK 353 (716)
Q Consensus 281 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~e~~~~~i~~~------~g~~~~~~~i~~~~~w~~~~~~a~~ 353 (716)
+......++++..+..++...+.+...+.. .....-.++.+.++++.. +....... ....|........+
T Consensus 208 ~~~~~~~g~~~~~P~~~~~~~vg~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~l~~~~~~~---~~~~~~~~~~~~~~ 284 (421)
T 3nix_A 208 AVVHKPKVWIWVIPFSNGNTSVGFVGEPSYFDEYTGTPEERMRAMIANEGHIAERFKSEEFLF---EPRTIEGYAISASK 284 (421)
T ss_dssp EEEEETTEEEEEEECTTSEEEEEEEECHHHHTTSCSCHHHHHHHHHHTCTTTHHHHTTCCBSS---CCEEEECCCBEESC
T ss_pred EEeCCCCEEEEEEEECCCCEEEEEEecHHHhhhcCCCHHHHHHHHHHhCcHHHHHHhcCcccc---Cceeecccceeeee
Confidence 221112233333344445544443322111 011111223333333321 11110000 11122222333455
Q ss_pred ceecCCeEEEEccCCccCCCCCCccchhhHhHHHHHHHHHHHHHcCCCchhHHHHHHHHHhHHHHHH
Q 005056 354 FLCCYNQIILAGDACHRFPPAGGFGMNTGVQDAHNLAWKIASVLKDIAPASILNTYETERKPIAEFN 420 (716)
Q Consensus 354 ~~~~~gRV~LvGDAAH~~~P~gG~G~n~gi~DA~~LawkLa~vl~g~a~~~lL~sY~~eRrp~a~~~ 420 (716)
+. .+|++|+|||||.++|+.|+|+|+|++||..|++.|+..+++. ....++.|+++++......
T Consensus 285 ~~--~~~v~lvGDAa~~~~P~~G~G~~~A~~~a~~la~~l~~~~~~~-~~~~~~~y~~~~~~~~~~~ 348 (421)
T 3nix_A 285 LY--GDGFVLTGNATEFLDPIFSSGATFAMESGSKGGKLAVQFLKGE-EVNWEKDFVEHMMQGIDTF 348 (421)
T ss_dssp SE--ETTEEECGGGTCBCCSTTCCHHHHHHHHHHHHHHHHHHHHTTC-CCCHHHHTHHHHHHHHHHH
T ss_pred ec--cCCEEEecccccccCCcccccHHHHHHHHHHHHHHHHHHhcCC-chhHHHHHHHHHHHHHHHH
Confidence 65 3899999999999999999999999999999999999988764 3457889999988755433
No 21
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=99.97 E-value=1.9e-30 Score=289.85 Aligned_cols=333 Identities=15% Similarity=0.082 Sum_probs=207.1
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCCC--CCCCeeeeChhHHHHHHhhhchHHHHHhcCCCcccccee
Q 005056 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFS--THPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKF 118 (716)
Q Consensus 41 ~~~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~~--~~p~a~~i~~rtmeilr~l~Gl~~~l~~~~~~~~~~~~~ 118 (716)
++++||+||||||+||++|+.|+++|++|+||||.+.+. ...++..+ ++++|+++ |+.+...... ...+...
T Consensus 4 ~~~~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~~~~~g~~~~g~~l---~~~~l~~l-g~~~~~~~~~--~~~~~~~ 77 (453)
T 3atr_A 4 ELKYDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPWNRIGDKPCGDAV---SKAHFDKL-GMPYPKGEEL--ENKINGI 77 (453)
T ss_dssp EEECSEEEECCSHHHHHHHHHHSSSSCCEEEECSSCGGGTTCSCCCCEE---EHHHHHHT-TCCCCCGGGE--EEEEEEE
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCcccccccc---cHHHHHHh-cCCCCchHHH--Hhhhcce
Confidence 346899999999999999999999999999999998642 33455555 46777777 6643211100 0001111
Q ss_pred EEeecCCCCceeeccCCCccccccccCCccccccChHHHHHHHHHHHHhcCceeecccccccccccccccceEEeCcEEE
Q 005056 119 IYCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECV 198 (716)
Q Consensus 119 ~~~~~~~g~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~l~~~~~~~~~v~~g~~v~ 198 (716)
.+. +..+.. .+ ..+.....++|..|.+.|.+.+.+.|+ +|+++++|+
T Consensus 78 ~~~-~~~~~~----------~~---~~~~~~~~i~r~~l~~~L~~~a~~~gv-------------------~i~~~~~v~ 124 (453)
T 3atr_A 78 KLY-SPDMQT----------VW---TVNGEGFELNAPLYNQRVLKEAQDRGV-------------------EIWDLTTAM 124 (453)
T ss_dssp EEE-CTTSSC----------EE---EEEEEEEEECHHHHHHHHHHHHHHTTC-------------------EEESSEEEE
T ss_pred EEE-CCCCce----------EE---eECCCcEEEcHHHHHHHHHHHHHHcCC-------------------EEEeCcEEE
Confidence 111 111100 00 011224568899999999999998887 999999999
Q ss_pred EEEecCCeEE-EEEEeccCCceeeEEEEecEEEecCCCChhhhhhcCCCccc--ccc---ccceEEEEEecCcccccccc
Q 005056 199 SVSATDQCIN-VIASFLKEGKCTERNIQCNILIGTDGAGSTVRKLVGIDLVG--EKD---LQKLVSVHFLSKDLGDYLLN 272 (716)
Q Consensus 199 ~i~~~~~gv~-v~v~~~~~g~~~~~~i~ad~VVgADG~~S~VR~~lgi~~~g--~~~---~~~~~~i~~~~~~l~~~~~~ 272 (716)
++++++++|+ +++....+|+ ..+++||+||+|||.+|.+|+.++..... ... ....+...+..... .
T Consensus 125 ~i~~~~~~v~gv~~~~~~~G~--~~~~~ad~VV~AdG~~s~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~ 197 (453)
T 3atr_A 125 KPIFEDGYVKGAVLFNRRTNE--ELTVYSKVVVEATGYSRSFRSKLPPELPITEDLDDKDADVAYREVLLTKED-----I 197 (453)
T ss_dssp EEEEETTEEEEEEEEETTTTE--EEEEECSEEEECCGGGCTTGGGSCTTSGGGCCCCGGGEEEEEEEEEEESSC-----C
T ss_pred EEEEECCEEEEEEEEEcCCCc--eEEEEcCEEEECcCCchhhHHhcCCCCCcccCCCcccceeeeEEEEecCCC-----c
Confidence 9999888875 5555321343 35799999999999999999999876421 111 11111111111110 0
Q ss_pred CCCceEEEEEe----cCceEEEEEecCCCCeEEEEEecCCCCCCCCCCCHHHHHHHHHHHcCCCCCceeEEeeccce-ec
Q 005056 273 ERPGMLFFIFN----TEAIGVLVAHDLKEGEFILQVPFYPPQQNLEDFSPEICEKLIFKLVGWELSDIDVIDIKPWV-MH 347 (716)
Q Consensus 273 ~~~~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~i~~~~g~~~~~~~i~~~~~w~-~~ 347 (716)
..+....++++ ++...++++.. ++.+.+.+.+...... .+ ..+.+.+.+++... .....+++....+. ..
T Consensus 198 ~~~~~~~~~~~~~~~~~g~~~~~P~~--~~~~~vg~~~~~~~~~-~~-~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~p~ 272 (453)
T 3atr_A 198 EDHDYLRIFIDQETSPGGYWWYFPKG--KNKVNVGLGIQGGMGY-PS-IHEYYKKYLDKYAP-DVDKSKLLVKGGALVPT 272 (453)
T ss_dssp TTTTEEEEECCTTTSTTSCEEEEEEE--TTEEEEEEEEESSSCC-CC-HHHHHHHHHHHHCT-TEEEEEEEEEEEEEEEC
T ss_pred cCCCeEEEEECCCCCCCcEEEEEECC--CCeEEEEEEecCCCCC-CC-HHHHHHHHHHhhhh-hcCCCeEEeccceeccC
Confidence 01222223332 34444555443 3444443332221111 11 23455566655422 11122333322221 22
Q ss_pred hhhhccceecCCeEEEEccCCccCCCCCCccchhhHhHHHHHHHHHHHHHc-CCCchhHHHHHHHHHhHHHHHHHHHHHH
Q 005056 348 AEVAEKFLCCYNQIILAGDACHRFPPAGGFGMNTGVQDAHNLAWKIASVLK-DIAPASILNTYETERKPIAEFNTALSVQ 426 (716)
Q Consensus 348 ~~~a~~~~~~~gRV~LvGDAAH~~~P~gG~G~n~gi~DA~~LawkLa~vl~-g~a~~~lL~sY~~eRrp~a~~~~~~s~~ 426 (716)
....++|. .+||+|+|||||.++|++|||+|+||+||.+||++|+..++ +...+.+|+.|+++|++.....+..+..
T Consensus 273 ~~~~~~~~--~~~v~lvGDAAh~~~P~~G~G~~~Ai~da~~la~~l~~~l~~~~~~~~~L~~Y~~~r~~~~~~~~~~~~~ 350 (453)
T 3atr_A 273 RRPLYTMA--WNGIIVIGDSGFTVNPVHGGGKGSAMISGYCAAKAILSAFETGDFSASGLWDMNICYVNEYGAKQASLDI 350 (453)
T ss_dssp SSCCSCSE--ETTEEECGGGGTCSCTTTCCCHHHHHHHHHHHHHHHHHHHHHTCCSTTTTTHHHHHHHHHTHHHHHHHHH
T ss_pred CCCCCcee--cCCEEEEeCcccCCCCCccccHHHHHHHHHHHHHHHHHHHHcCCccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34556776 39999999999999999999999999999999999998775 5445789999999999999877766543
No 22
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=99.97 E-value=1.1e-30 Score=299.29 Aligned_cols=348 Identities=16% Similarity=0.189 Sum_probs=220.3
Q ss_pred CCCccCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCCCCCCCeeeeChhHHHHHHhhhchHHHHHhcCCCcccccee
Q 005056 39 SNEAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKF 118 (716)
Q Consensus 39 ~~~~~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~~~~p~a~~i~~rtmeilr~l~Gl~~~l~~~~~~~~~~~~~ 118 (716)
++|+++||+||||||+|+++|+.|+++|++|+||||.+.+.. ..+..+++.++++|+.+ |+.+.+...+........+
T Consensus 19 ~~M~~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~~~~~-~~G~~l~p~~~~~l~~l-Gl~~~l~~~~~~~~~~~~~ 96 (591)
T 3i3l_A 19 SHMTRSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSAFPRY-RVGESLLPGTMSILNRL-GLQEKIDAQNYVKKPSATF 96 (591)
T ss_dssp -CCCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCC-CCCCBCCHHHHHHHHHT-TCHHHHHHHCCEEECEEEE
T ss_pred CcCCCCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCCCCCC-ceeeeECHHHHHHHHHc-CCcHHHHhcCCcccCCcEE
Confidence 335579999999999999999999999999999999976544 34788999999999999 9999988776443222222
Q ss_pred EEeecCCCCceeeccCCCccccccccCCccccccChHHHHHHHHHHHHhcCceeecccccccccccccccceEEeCcEEE
Q 005056 119 IYCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECV 198 (716)
Q Consensus 119 ~~~~~~~g~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~l~~~~~~~~~v~~g~~v~ 198 (716)
.+. .+........... .... ......+++++..|...|.+.+.+.|+ +++++++|+
T Consensus 97 ~~~---~~~~~~~~~~~~~-~~~~-~~~~~~~~v~r~~l~~~L~~~a~~~Gv-------------------~i~~g~~V~ 152 (591)
T 3i3l_A 97 LWG---QDQAPWTFSFAAP-KVAP-WVFDHAVQVKREEFDKLLLDEARSRGI-------------------TVHEETPVT 152 (591)
T ss_dssp ECS---SSCCCEEEECCCC---CT-TCCSCEEECCHHHHHHHHHHHHHHTTC-------------------EEETTCCEE
T ss_pred Eec---CCCccceeecccc-cccc-cccCeeEEEcHHHHHHHHHHHHHhCCC-------------------EEEeCCEEE
Confidence 211 1111101111000 0000 011224578999999999999998887 999999999
Q ss_pred EEEec-CCeEEEEEEeccCCceeeEEEEecEEEecCCCChhhhhhcCCCccccccccceEEEEEecCccccccccCCCce
Q 005056 199 SVSAT-DQCINVIASFLKEGKCTERNIQCNILIGTDGAGSTVRKLVGIDLVGEKDLQKLVSVHFLSKDLGDYLLNERPGM 277 (716)
Q Consensus 199 ~i~~~-~~gv~v~v~~~~~g~~~~~~i~ad~VVgADG~~S~VR~~lgi~~~g~~~~~~~~~i~~~~~~l~~~~~~~~~~~ 277 (716)
+++.+ ++.+.+++.. +|+ ..+++||+||+|||.+|.+|+++++...........+...+..... ........
T Consensus 153 ~v~~~~g~~~~V~~~~--~G~--~~~i~AdlVV~AdG~~S~lr~~lg~~~~~~~~~~~av~~~~~~~~~---~~~~~~~~ 225 (591)
T 3i3l_A 153 DVDLSDPDRVVLTVRR--GGE--SVTVESDFVIDAGGSGGPISRKLGVRQYDEFYRNFAVWSYFKLKDP---FEGDLKGT 225 (591)
T ss_dssp EEECCSTTCEEEEEEE--TTE--EEEEEESEEEECCGGGCHHHHHHTCEEEEEEEEEEEEEEEEECCCS---CCSTTTTC
T ss_pred EEEEcCCCEEEEEEec--CCc--eEEEEcCEEEECCCCcchhHHHcCCCCCCccccceEEEEEEecCcc---ccCCCCCc
Confidence 99875 5566666652 442 3579999999999999999999987643222111122222322110 01112233
Q ss_pred EEEEEecCceEEEEEecCCCCeEEEEEecCCCCCCCCCCCHHHHHHHHHHHcCCCC------Cce----eEEeeccceec
Q 005056 278 LFFIFNTEAIGVLVAHDLKEGEFILQVPFYPPQQNLEDFSPEICEKLIFKLVGWEL------SDI----DVIDIKPWVMH 347 (716)
Q Consensus 278 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~i~~~~g~~~------~~~----~i~~~~~w~~~ 347 (716)
.+..+.+.++.++++ ..++.+.+.+...+.. ...+......++++++....+ ... +......|..
T Consensus 226 ~~~~~~~~G~~w~iP--l~~~~~sv~~~~~~~~--~~~l~~~~~~~~~~~l~~~~p~l~~~l~~~~~~~~~~~~~~~~~- 300 (591)
T 3i3l_A 226 TYSITFEDGWVWMIP--IKDDLYSVGLVVDRSK--SAEVREQGADAFYSSTLAKCAKAMDILGGAEQVDEVRIVQDWSY- 300 (591)
T ss_dssp EEEEEETTEEEEEEE--CSSSEEEEEEEEEGGG--HHHHHHHCHHHHHHHHHTTCHHHHHHHTTCEECSCCEEEEEEEE-
T ss_pred eEEEEcCCcEEEEEE--CCCCeEEEEEEcCHHH--HhhhccCCHHHHHHHHHHhCHHHHHHHhcCccccCceEeccccc-
Confidence 344445554444444 3445555443221111 000000001122222211110 000 0111112322
Q ss_pred hhhhccceecCCeEEEEccCCccCCCCCCccchhhHhHHHHHHHHHHHHHcCCC-chhHHHHHHHHHhHHHHHHHHHHHH
Q 005056 348 AEVAEKFLCCYNQIILAGDACHRFPPAGGFGMNTGVQDAHNLAWKIASVLKDIA-PASILNTYETERKPIAEFNTALSVQ 426 (716)
Q Consensus 348 ~~~a~~~~~~~gRV~LvGDAAH~~~P~gG~G~n~gi~DA~~LawkLa~vl~g~a-~~~lL~sY~~eRrp~a~~~~~~s~~ 426 (716)
...+|. .+||+|+|||||.++|+.|+|+|+|++||..||++|...+.+.. .+.+++.|+++|++......+....
T Consensus 301 --~~~~~~--~~rvvLIGDAAh~~~Pl~GqGinlAl~dA~~LA~~L~~~l~~~~~~~~al~~Y~~~~~~~~~~i~~~~~~ 376 (591)
T 3i3l_A 301 --DTEVFS--ADRFFLCGDAACFTDPLFSQGVHLASQSAVSAAAAIDRITRHGDEKDAVHAWYNRTYREAYEQYHQFLAS 376 (591)
T ss_dssp --EESCSE--ETTEEECGGGTCBCCGGGCCHHHHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred --chhhcc--cCCEEEEccccccCCCcccccHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345665 49999999999999999999999999999999999998876543 4568999999999999999888887
Q ss_pred HH
Q 005056 427 NF 428 (716)
Q Consensus 427 ~~ 428 (716)
.|
T Consensus 377 ~Y 378 (591)
T 3i3l_A 377 FY 378 (591)
T ss_dssp HH
T ss_pred HH
Confidence 77
No 23
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=99.97 E-value=3.8e-30 Score=292.74 Aligned_cols=344 Identities=13% Similarity=0.127 Sum_probs=209.2
Q ss_pred CccCCEEEECCCHHHHHHHHHHHh------------CCCCEEEECCCCCCCCCCCeeeeChhHHHHHHhhhchHHH--HH
Q 005056 41 EAVVPVLIVGAGPVGLVLSILLTK------------LGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEE--IE 106 (716)
Q Consensus 41 ~~~~dVlIVGaGpaGLt~Al~Lar------------~Gi~v~liEr~~~~~~~p~a~~i~~rtmeilr~l~Gl~~~--l~ 106 (716)
+..+||+||||||+|+++|+.|++ .|++|+||||.+.+.... +..+.++++++|+++ |+.+. +.
T Consensus 5 ~~~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~~V~liE~~~~~~~g~-g~~~~p~~~~~l~~l-Gi~e~~~~~ 82 (526)
T 2pyx_A 5 KPITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKLNITLIESPDVATIGV-GEGTWPSMRSTLSKI-GIDENDFIR 82 (526)
T ss_dssp SCCCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSCEEEEEECSSCCCCCS-CEECCTHHHHHHHHH-TCCHHHHHH
T ss_pred CCCCeEEEECCCHHHHHHHHHHHhhhccccccccCCCCCeEEEEeCCCCCCcce-eeechHhHHHHHHHc-CCCHHHHHH
Confidence 346899999999999999999999 999999999977655443 888999999999999 99886 56
Q ss_pred hcCCCccc------cce-------eEEeecCC-CCceeeccCC-------Cc-------------------------ccc
Q 005056 107 RSQPPVDL------WRK-------FIYCTSVT-GPILGSVDHM-------QP-------------------------QDF 140 (716)
Q Consensus 107 ~~~~~~~~------~~~-------~~~~~~~~-g~~l~~~~~~-------~~-------------------------~~~ 140 (716)
+.+..... |.. ..+..... |..+...+.. .. ..+
T Consensus 83 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~v~~q~~~~~~~~~~~~~~~~~~ 162 (526)
T 2pyx_A 83 QCDASFKQGSRFINWCKDPQSNVADSYLHPFSLPHGHQELDLCPYWLPHAEQVSFAEAVCSQQVLTQLGLAPKSIVTAQY 162 (526)
T ss_dssp HTTCEEECEEEEESCSSCCBTTBCCEEEEESSCCTTTTTCCCHHHHGGGTTTSCHHHHHCSHHHHHHTTBCSSCTTSCTT
T ss_pred HcCCEEECCCcccCCCccccCCCCCceecCCCCCCCCCCCChhHHHHhhhhccCchhhcccccchhhhccchhhhhcccc
Confidence 55432111 110 01111110 1000000000 00 000
Q ss_pred ccccCCccccccChHHHHHHHHHHHHh-cCceeecccccccccccccccceEEeCcEEEEEEecCCeEEEEEEeccCCce
Q 005056 141 EKVVSPVSVAHFSQYKLNKLLLKQLEK-LNFKICTSEGTEGLHNHLLQGREILMGHECVSVSATDQCINVIASFLKEGKC 219 (716)
Q Consensus 141 ~~~~~p~~~~~i~q~~Le~~L~~~~~~-~g~~~~~~~~~~~l~~~~~~~~~v~~g~~v~~i~~~~~gv~v~v~~~~~g~~ 219 (716)
. .......++++..|.+.|.+.+.+ .|+ +++++ +|++++++++++.+.+... +|.
T Consensus 163 ~--~~~~~~~~~~r~~l~~~L~~~a~~~~Gv-------------------~i~~~-~v~~i~~~~~g~~~~v~~~-~g~- 218 (526)
T 2pyx_A 163 H--FQNNYGYHLNAAKFSQLLTEHCTQKLGV-------------------THIRD-HVSQIINNQHGDIEKLITK-QNG- 218 (526)
T ss_dssp C--CSSCCEEEECHHHHHHHHHHHHHHTSCC-------------------EEEEC-CEEEEEECTTSCEEEEEES-SSC-
T ss_pred C--CCCCeeEEEcHHHHHHHHHHHHHhcCCC-------------------EEEEe-EEEEEEecCCCcEEEEEEC-CCC-
Confidence 0 011224578999999999999998 787 89999 6999998776654445432 443
Q ss_pred eeEEEEecEEEecCCCChhh-hhhcCCCcccccc---ccceEEEEEecCccccccccCCCceEEEEEecCceEEEEEecC
Q 005056 220 TERNIQCNILIGTDGAGSTV-RKLVGIDLVGEKD---LQKLVSVHFLSKDLGDYLLNERPGMLFFIFNTEAIGVLVAHDL 295 (716)
Q Consensus 220 ~~~~i~ad~VVgADG~~S~V-R~~lgi~~~g~~~---~~~~~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 295 (716)
+++||+||+|||.+|.+ |+.+|+++.+... ....+.+......... ...+.. ...+.+..+.++++.
T Consensus 219 ---~i~ad~vV~AdG~~S~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-~~~~~~~g~~~~~pl-- 289 (526)
T 2pyx_A 219 ---EISGQLFIDCTGAKSLLLGEHLQVPFLSQKSVLFNDRALAIQVPYSDANS---PIASCT-HSTAQPNGWIWDIGL-- 289 (526)
T ss_dssp ---EEECSEEEECSGGGCCCCCCCTCCCEEECHHHHCCCEEEEEEEECSSTTC---CCCSSE-EEEEETTEEEEEEEC--
T ss_pred ---EEEcCEEEECCCcchHHHHHHhCCCcccccccccCccEEEEEeeccCCCC---CCCCce-eEEecCCCeEEEeeC--
Confidence 48999999999999999 6778877643321 1122322222111000 011111 122333333333333
Q ss_pred CCCeEEEEEecCCCCCCCCCCCHHHHHHHHHHHcCCCCCceeEEeeccceechhhhccceecCCeEEEEccCCccCCCCC
Q 005056 296 KEGEFILQVPFYPPQQNLEDFSPEICEKLIFKLVGWELSDIDVIDIKPWVMHAEVAEKFLCCYNQIILAGDACHRFPPAG 375 (716)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~e~~~~~i~~~~g~~~~~~~i~~~~~w~~~~~~a~~~~~~~gRV~LvGDAAH~~~P~g 375 (716)
.+...+..+ +.+. ..+++...+.+++.+......++......|.+.....++|. .|||+|+|||||.++|+.
T Consensus 290 ~~~~~~~~v-~~~~-----~~~~~~~~~~l~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~--~grv~LiGDAAh~~~P~~ 361 (526)
T 2pyx_A 290 PTRKGVGYV-YSSS-----HTNDIDAQKTLFNYLGVDGAAADKLEPRQLAINPGYRAKCW--QNNCIAIGMAAGFIEPLE 361 (526)
T ss_dssp SSEEEEEEE-ECTT-----TCCHHHHHHHHHHHHTCCHHHHHHCCCEEEECCCEEESCSE--ETTEEECGGGTEECCCTT
T ss_pred CCceEEEEE-ecCC-----CCChHHHHHHHHHHHHhcCcccccCCceEEecccCcccccc--CCCEEEEEhhhcccCccc
Confidence 222222221 1111 12344455556555522101111011122333334456666 499999999999999999
Q ss_pred CccchhhHhHHHHHHHHHHHHHcCCCchhHHHHHHHHHhHHHHHHHHHHHHHHH
Q 005056 376 GFGMNTGVQDAHNLAWKIASVLKDIAPASILNTYETERKPIAEFNTALSVQNFR 429 (716)
Q Consensus 376 G~G~n~gi~DA~~LawkLa~vl~g~a~~~lL~sY~~eRrp~a~~~~~~s~~~~~ 429 (716)
|+|+|+||+||..|+..|.. .+...+.+|++|+++|+++.+++.+....++.
T Consensus 362 GqGi~~ai~da~~La~~L~~--~~~~~~~~l~~Y~~~~~~~~~~~~~~~~~~y~ 413 (526)
T 2pyx_A 362 ASALALIEWTASTLAQQLPP--NRMVMDTISARVNERYQQHWQQIIDFLKLHYV 413 (526)
T ss_dssp CHHHHHHHHHHHHHHHTCCS--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHhhh--cCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999988877642 11234689999999999999888876655554
No 24
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=99.97 E-value=2.9e-28 Score=279.90 Aligned_cols=332 Identities=16% Similarity=0.099 Sum_probs=194.2
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhC------CCCEEEECCCCCCCCC-CCeeeeChhHHHHHHhhhchHHHHHhcCCCcc
Q 005056 41 EAVVPVLIVGAGPVGLVLSILLTKL------GIKCSVLEKNKAFSTH-PQAHFINNRYALVFRKLDGLAEEIERSQPPVD 113 (716)
Q Consensus 41 ~~~~dVlIVGaGpaGLt~Al~Lar~------Gi~v~liEr~~~~~~~-p~a~~i~~rtmeilr~l~Gl~~~l~~~~~~~~ 113 (716)
.+++||+||||||+||++|+.|+++ |++|+||||.+.+..+ ..+..+++++++.| + +- +.+.+.+..
T Consensus 33 ~~~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~l~~~~l~~l--l-~~---~~~~g~~~~ 106 (584)
T 2gmh_A 33 AEEADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGACLDPRAFEEL--F-PD---WKEKGAPLN 106 (584)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTTTCCCCCEECTHHHHHH--C-TT---HHHHTCCCC
T ss_pred ccCCCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCCCCccccccccCHHHHHHH--H-HH---HHhcCCcee
Confidence 3468999999999999999999999 9999999999876543 46778899998876 3 22 222333332
Q ss_pred cc---ceeEEeecCCCCceeeccCCCccccccccCCccccccChHHHHHHHHHHHHhcCceeecccccccccccccccce
Q 005056 114 LW---RKFIYCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGRE 190 (716)
Q Consensus 114 ~~---~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~l~~~~~~~~~ 190 (716)
.. ..+.+... .+ .+ .++.. +.. .........++|..|.+.|.+++++.|+ +
T Consensus 107 ~~~~~~~~~~~~~-~~-~~-~~~~~-~~~---~~~~~~~~~v~r~~l~~~L~~~a~~~Gv-------------------~ 160 (584)
T 2gmh_A 107 TPVTEDRFGILTE-KY-RI-PVPIL-PGL---PMNNHGNYVVRLGHLVSWMGEQAEALGV-------------------E 160 (584)
T ss_dssp EECCEEEEEEECS-SC-EE-ECCCC-TTS---TTCCTTCEECCHHHHHHHHHHHHHHTTC-------------------E
T ss_pred eeechhheeeecc-CC-Cc-ccccc-Ccc---ccccCCCEEEeHHHHHHHHHHHHHHcCC-------------------E
Confidence 10 11222111 11 11 11100 000 0111124567899999999999999887 9
Q ss_pred EEeCcEEEEEEecCCe-EE-EEEEec---cCCcee-----eEEEEecEEEecCCCChhhhhhc----CCCcccccc-ccc
Q 005056 191 ILMGHECVSVSATDQC-IN-VIASFL---KEGKCT-----ERNIQCNILIGTDGAGSTVRKLV----GIDLVGEKD-LQK 255 (716)
Q Consensus 191 v~~g~~v~~i~~~~~g-v~-v~v~~~---~~g~~~-----~~~i~ad~VVgADG~~S~VR~~l----gi~~~g~~~-~~~ 255 (716)
|+++++|+++.+++++ |+ |++.+. .+|+.. ..+++||+||+|||++|.+|+++ ++....... ...
T Consensus 161 i~~g~~v~~l~~~~~g~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~S~vr~~l~~~~gl~~~~~p~~~g~ 240 (584)
T 2gmh_A 161 VYPGYAAAEILFHEDGSVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIFAEGCHGHLAKQLYKKFDLRANCEPQTYGI 240 (584)
T ss_dssp EETTCCEEEEEECTTSSEEEEEECCEEECTTSCEEEEEECCCEEECSEEEECCCTTCHHHHHHHHHTTTTTTSCCCCEEE
T ss_pred EEcCCEEEEEEEcCCCCEEEEEeCCccccCCCCcccccCCceEEECCEEEEeeCCCchHHHHHHHHhCCCCCCCchhHHh
Confidence 9999999999987754 43 443310 133200 13799999999999999999887 655322111 111
Q ss_pred eEEEEEecCccccccccCCCceEEEEEe----cC--ceEEEEEecCCCCeEEEEEecCCCCCCCCCCC-HHHHHHHH---
Q 005056 256 LVSVHFLSKDLGDYLLNERPGMLFFIFN----TE--AIGVLVAHDLKEGEFILQVPFYPPQQNLEDFS-PEICEKLI--- 325 (716)
Q Consensus 256 ~~~i~~~~~~l~~~~~~~~~~~~~~~~~----~~--~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~e~~~~~i--- 325 (716)
.+...+..+ .. ...++...+.+. .. ..++++.....++.+.+.+........ ...+ .+.+.+++
T Consensus 241 g~~~~~~v~-~~----~~~~~~~~~~~g~~~~~~~~gg~~~~~~~~~~~~~~vg~~~~~~~~~-~~~~~~~~l~~~~~~p 314 (584)
T 2gmh_A 241 GLKELWVID-EK----KWKPGRVDHTVGWPLDRHTYGGSFLYHLNEGEPLLALGFVVGLDYQN-PYLSPFREFQRWKHHP 314 (584)
T ss_dssp EEEEEEECC-GG----GCCTTEEEEEEETTSCTTSCEEEEEEECCSSSCEEEEEEEEETTCCC-TTCCHHHHHHHHTTST
T ss_pred hhhhheecC-cc----cccCCeEEEEEeccccCCcCCceEEEEecCCCCeEEEEEEEecCccc-ccCChHHHHHHHHhCh
Confidence 111112111 11 112333222221 11 123333332103455544332221111 1112 23333321
Q ss_pred --HHHcCCCCCceeEEee---ccceechhhhccceecCCeEEEEccCCccCCCCCCccchhhHhHHHHHHHHHHHHHc-C
Q 005056 326 --FKLVGWELSDIDVIDI---KPWVMHAEVAEKFLCCYNQIILAGDACHRFPPAGGFGMNTGVQDAHNLAWKIASVLK-D 399 (716)
Q Consensus 326 --~~~~g~~~~~~~i~~~---~~w~~~~~~a~~~~~~~gRV~LvGDAAH~~~P~gG~G~n~gi~DA~~LawkLa~vl~-g 399 (716)
+..+.. .++... ..|.......++|.. +||+|+|||||.++|+.|+|+|+||+||.+|||+|+.+++ +
T Consensus 315 ~i~~~l~~----~~~~~~~~~~~~~~~~~~~~~~~~--~rv~LvGDAAh~~~P~~GqG~~~Ai~da~~LA~~L~~~~~~g 388 (584)
T 2gmh_A 315 SIKPTLEG----GKRIAYGARALNEGGFQSIPKLTF--PGGLLIGCSPGFMNVPKIKGTHTAMKSGTLAAESIFNQLTSE 388 (584)
T ss_dssp TTHHHHTT----CEEEEEEEEEEECCGGGGCCCCEE--TTEEECTTTTCCCBTTTTBCHHHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHhCC----CeEEEecceEccCCCcccCCcccc--CCEEEEcccccccCccccccHHHHHHHHHHHHHHHHHHHHcC
Confidence 222211 122211 112223345667764 9999999999999999999999999999999999999885 4
Q ss_pred C-Cchh---HHHHHHHHHhHH
Q 005056 400 I-APAS---ILNTYETERKPI 416 (716)
Q Consensus 400 ~-a~~~---lL~sY~~eRrp~ 416 (716)
. ..+. +|++|+++|++.
T Consensus 389 ~~~~~~a~~~L~~Ye~~r~~~ 409 (584)
T 2gmh_A 389 NLQSKTIGLHVTEYEDNLKNS 409 (584)
T ss_dssp CCCCSSSSCCCTHHHHHHHTS
T ss_pred CcchhhhhhhHHHHHHHHHHh
Confidence 2 2345 499999999976
No 25
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=99.96 E-value=3.4e-27 Score=269.21 Aligned_cols=340 Identities=13% Similarity=0.118 Sum_probs=205.9
Q ss_pred CccCCEEEECCCHHHHHHHHHHHh---CCCCEEEECCCCCCCCCCCeeeeChhHHH-HHHhhhchHHH--HHhcCCCccc
Q 005056 41 EAVVPVLIVGAGPVGLVLSILLTK---LGIKCSVLEKNKAFSTHPQAHFINNRYAL-VFRKLDGLAEE--IERSQPPVDL 114 (716)
Q Consensus 41 ~~~~dVlIVGaGpaGLt~Al~Lar---~Gi~v~liEr~~~~~~~p~a~~i~~rtme-ilr~l~Gl~~~--l~~~~~~~~~ 114 (716)
+..+||+||||||+|+++|+.|++ .|++|+||||...+.... +..+.+++++ +++.+ |+.+. +.........
T Consensus 3 ~~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~~~~~~~-g~~~~~~~~~~~l~~l-G~~~~~~~~~~~~~~~~ 80 (538)
T 2aqj_A 3 KPIKNIVIVGGGTAGWMAASYLVRALQQQANITLIESAAIPRIGV-GEATIPSLQKVFFDFL-GIPEREWMPQVNGAFKA 80 (538)
T ss_dssp CBCCEEEEECCSHHHHHHHHHHHHHCCSSCEEEEEECSSSCCCCS-CEECCTHHHHHTHHHH-TCCHHHHGGGGTCEEEC
T ss_pred CCCCeEEEECCCHHHHHHHHHHHhhcCCCCEEEEECCCCCCCcCC-CcccchhHHHHHHHHh-CCCHHHHHHhcCchhhC
Confidence 345899999999999999999999 999999999976554333 7888999999 99999 88764 4443322210
Q ss_pred ------cce-------eEEeecCCCCce--eecc-------------CCC----------cccc-------ccccCCccc
Q 005056 115 ------WRK-------FIYCTSVTGPIL--GSVD-------------HMQ----------PQDF-------EKVVSPVSV 149 (716)
Q Consensus 115 ------~~~-------~~~~~~~~g~~l--~~~~-------------~~~----------~~~~-------~~~~~p~~~ 149 (716)
|.. ..+... .|... ...+ ... ..++ .........
T Consensus 81 g~~~~~w~~~l~~~~~~~~~~~-~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 159 (538)
T 2aqj_A 81 AIKFVNWRKSPDPSRDDHFYHL-FGNVPNCDGVPLTHYWLRKREQGFQQPMEYACYPQPGALDGKLAPCLSDGTRQMSHA 159 (538)
T ss_dssp EEEEESCSSSCCTTSCCEEEEE-SSCCCEETTEEHHHHHHHHHHTTCCSCHHHHHCSCHHHHHTTBCSBCTTCCBCSCCE
T ss_pred CccccCcCcccccCCCCceECC-CCccCccccCchhHHHHHhcccccccCccccccccccHhhhccchHhhcCCcCCCcc
Confidence 100 000000 11000 0000 000 0000 000001123
Q ss_pred cccChHHHHHHHHHHHHhcCceeecccccccccccccccceEEeCcEEEEEEecCCeEEEEEEeccCCceeeEEEEecEE
Q 005056 150 AHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSATDQCINVIASFLKEGKCTERNIQCNIL 229 (716)
Q Consensus 150 ~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~l~~~~~~~~~v~~g~~v~~i~~~~~gv~v~v~~~~~g~~~~~~i~ad~V 229 (716)
.++++..|...|.+.+.+.|+ +++++ +|+++++++++..+.+.. .+|+ +++||+|
T Consensus 160 ~~i~~~~l~~~L~~~a~~~gv-------------------~~~~~-~v~~i~~~~~g~~~~v~~-~~g~----~i~ad~v 214 (538)
T 2aqj_A 160 WHFDAHLVADFLKRWAVERGV-------------------NRVVD-EVVDVRLNNRGYISNLLT-KEGR----TLEADLF 214 (538)
T ss_dssp EEECHHHHHHHHHHHHHHTTC-------------------EEEEC-CEEEEEECTTSCEEEEEE-TTSC----EECCSEE
T ss_pred EEEeHHHHHHHHHHHHHHCCC-------------------EEEEe-eEeEEEEcCCCcEEEEEE-CCCc----EEEeCEE
Confidence 578999999999999998887 89999 899999876653333432 2453 6899999
Q ss_pred EecCCCChhhh-hhcCCCcccccc---ccceEEEEEecCccccccccCCCceEEEEEecCceEEEEEecCCCCeEEEEEe
Q 005056 230 IGTDGAGSTVR-KLVGIDLVGEKD---LQKLVSVHFLSKDLGDYLLNERPGMLFFIFNTEAIGVLVAHDLKEGEFILQVP 305 (716)
Q Consensus 230 VgADG~~S~VR-~~lgi~~~g~~~---~~~~~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 305 (716)
|+|||.+|.+| +.+|+.+.+... ....+.+...... .. ....+.. ...+.+.+..++++.. + ...+...
T Consensus 215 V~A~G~~s~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~-~~~~~~~g~~~~~p~~--~-~~~~g~v 287 (538)
T 2aqj_A 215 IDCSGMRGLLINQALKEPFIDMSDYLLCDSAVASAVPNDD--AR-DGVEPYT-SSIAMNSGWTWKIPML--G-RFGSGYV 287 (538)
T ss_dssp EECCGGGCCCCCCCTCCCEEECTTTCCCCEEEEEEEECCH--HH-HCCCSSE-EEEECSSEEEEEEEET--T-EEEEEEE
T ss_pred EECCCCchhhHHHHhCCCccccccccccceEEEEecccCC--cc-cCCCCce-eeeecCCceEEEecCC--C-ceEEEEE
Confidence 99999999995 556776543321 1122222222110 00 0011111 1123333333344432 2 2222222
Q ss_pred cCCCCCCCCCCCHHHHHHHHHHHcCCCCCceeEEeeccceechhhhccceecCCeEEEEccCCccCCCCCCccchhhHhH
Q 005056 306 FYPPQQNLEDFSPEICEKLIFKLVGWELSDIDVIDIKPWVMHAEVAEKFLCCYNQIILAGDACHRFPPAGGFGMNTGVQD 385 (716)
Q Consensus 306 ~~~~~~~~~~~~~e~~~~~i~~~~g~~~~~~~i~~~~~w~~~~~~a~~~~~~~gRV~LvGDAAH~~~P~gG~G~n~gi~D 385 (716)
+.. ...+++...+.+++.++..+. . ....|.+.....++|. .|||+|+|||||.++|+.|+|+|+||+|
T Consensus 288 ~~~-----~~~~~~~~~~~l~~~~~~~~~-~---~~~~~~~~~~~~~~~~--~grvvliGDAAh~~~P~~gqG~~~a~~d 356 (538)
T 2aqj_A 288 FSS-----HFTSRDQATADFLKLWGLSDN-Q---PLNQIKFRVGRNKRAW--VNNCVSIGLSSCFLEPLESTGIYFIYAA 356 (538)
T ss_dssp ECT-----TTSCHHHHHHHHHHHHTCCTT-C---CCEEEECCCEEESCSE--ETTEEECGGGTEECCGGGSCHHHHHHHH
T ss_pred EcC-----CCCChHHHHHHHHHHhcCCCC-C---CceEEeeccccccccc--cCCEEEEcccccccCcchhccHHHHHHH
Confidence 221 122455666677777654221 1 1122333333455665 4999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCCchhHHHHHHHHHhHHHHHHHHHHHHHHH
Q 005056 386 AHNLAWKIASVLKDIAPASILNTYETERKPIAEFNTALSVQNFR 429 (716)
Q Consensus 386 A~~LawkLa~vl~g~a~~~lL~sY~~eRrp~a~~~~~~s~~~~~ 429 (716)
|.+|+..|. .+...+.+|+.|+++|+++.+++.+....++.
T Consensus 357 a~~La~~L~---~~~~~~~~l~~Y~~~~~~~~~~~~~~~~~~y~ 397 (538)
T 2aqj_A 357 LYQLVKHFP---DTSFDPRLSDAFNAEIVHMFDDCRDFVQAHYF 397 (538)
T ss_dssp HHHHHHTCC---BTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 999997764 34456789999999999998887776555553
No 26
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=99.95 E-value=4.6e-27 Score=266.54 Aligned_cols=336 Identities=14% Similarity=0.122 Sum_probs=203.6
Q ss_pred CCEEEECCCHHHHHHHHHHHh---CCCCEEEECCCCCCCCCCCeeeeChhHHHHHHhhhchHHH--HHhcCCCccc----
Q 005056 44 VPVLIVGAGPVGLVLSILLTK---LGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEE--IERSQPPVDL---- 114 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar---~Gi~v~liEr~~~~~~~p~a~~i~~rtmeilr~l~Gl~~~--l~~~~~~~~~---- 114 (716)
+||+||||||+|+++|+.|++ +|++|+||||.+.+. ...+..+.+.++++++.+ |+.+. +.........
T Consensus 3 ~dVvIVGgG~aGl~~A~~La~~~~~G~~V~lvE~~~~~~-~~~g~~~~~~~~~~l~~l-gi~~~~~~~~~~~~~~~~~~~ 80 (511)
T 2weu_A 3 RSVVIVGGGTAGWMTASYLKAAFDDRIDVTLVESGNVRR-IGVGEATFSTVRHFFDYL-GLDEREWLPRCAGGYKLGIRF 80 (511)
T ss_dssp CEEEEECCHHHHHHHHHHHHHHHGGGSEEEEEEC--------CCEECCTTHHHHHHHH-TCCHHHHHHHTTCEEECEEEE
T ss_pred ceEEEECCCHHHHHHHHHHHhhcCCCCEEEEEecCCCCc-eeeccccCcchHHHHHHc-CCCHHHHHHHcCCeEecccee
Confidence 699999999999999999999 999999999986543 334677889999999999 98775 5554322211
Q ss_pred --cce--eEEeecCC------CCce------------------------eeccCCCc----ccc----c------c--cc
Q 005056 115 --WRK--FIYCTSVT------GPIL------------------------GSVDHMQP----QDF----E------K--VV 144 (716)
Q Consensus 115 --~~~--~~~~~~~~------g~~l------------------------~~~~~~~~----~~~----~------~--~~ 144 (716)
|.. ..+..... +..+ ........ ..+ . . ..
T Consensus 81 ~~w~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 160 (511)
T 2weu_A 81 ENWSEPGEYFYHPFERLRVVDGFNMAEWWLAVGDRRTSFSEACYLTHRLCEAKRAPRMLDGSLFASQVDESLGRSTLAEQ 160 (511)
T ss_dssp ESSSSTTCEEEEESCCCCEETTEEHHHHHHHHC----CHHHHHCHHHHHHHTTBCSBCTTSCBCC------CCSCCGGGC
T ss_pred cCCCCCCCceEcCCCCCCCCCCCchHHHHHhccccccCcccccccccCHHHhhhhHHhHhcCCccccccccccccccccC
Confidence 100 00001000 0000 00000000 001 0 0 00
Q ss_pred C--CccccccChHHHHHHHHHHHHhcCceeecccccccccccccccceEEeCcEEEEEEecCCeEEEEEEeccCCceeeE
Q 005056 145 S--PVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSATDQCINVIASFLKEGKCTER 222 (716)
Q Consensus 145 ~--p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~l~~~~~~~~~v~~g~~v~~i~~~~~gv~v~v~~~~~g~~~~~ 222 (716)
. .....++++..|.+.|.+.+.+.|+ +++++ +|+++++++++..+.+.. .+|+
T Consensus 161 ~~~~~~~~~~~~~~l~~~L~~~a~~~gv-------------------~~~~~-~v~~i~~~~~~~~~~v~~-~~g~---- 215 (511)
T 2weu_A 161 RAQFPYAYHFDADEVARYLSEYAIARGV-------------------RHVVD-DVQHVGQDERGWISGVHT-KQHG---- 215 (511)
T ss_dssp CSCCSCEEEECHHHHHHHHHHHHHHTTC-------------------EEEEC-CEEEEEECTTSCEEEEEE-SSSC----
T ss_pred cCCCCeeEEEcHHHHHHHHHHHHHHCCC-------------------EEEEC-eEeEEEEcCCCCEEEEEE-CCCC----
Confidence 0 1224578999999999999998887 89999 999999876663333432 2453
Q ss_pred EEEecEEEecCCCChhhh-hhcCCCccccc---cccceEEEEEecCccccccccCCCceEEEEEecCceEEEEEecCCCC
Q 005056 223 NIQCNILIGTDGAGSTVR-KLVGIDLVGEK---DLQKLVSVHFLSKDLGDYLLNERPGMLFFIFNTEAIGVLVAHDLKEG 298 (716)
Q Consensus 223 ~i~ad~VVgADG~~S~VR-~~lgi~~~g~~---~~~~~~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 298 (716)
+++||+||+|||.+|.+| +.+|+++.+.. .....+.+.+..... . ...+ .....+.+....++++. .+
T Consensus 216 ~~~ad~vV~A~G~~S~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~-~~~~~~~~~g~~~~~P~--~~- 287 (511)
T 2weu_A 216 EISGDLFVDCTGFRGLLINQTLGGRFQSFSDVLPNNRAVALRVPREND-E---DMRP-YTTATAMSAGWMWTIPL--FK- 287 (511)
T ss_dssp EEECSEEEECCGGGCCCCCCCTCCCEEECTTTCCCCEEEEEEEECSSG-G---GCCS-SEEEEEETTEEEEEEEC--SS-
T ss_pred EEEcCEEEECCCcchHHHHHHhCCCCccccccCcccceEEEEeccCCC-C---CCCc-ceeceecCCCcEEEEEC--CC-
Confidence 689999999999999995 55687654321 111222222221110 0 0111 12223344433344433 22
Q ss_pred eEEEEEecCCCCCCCCCCCHHHHHHHHHHHcCCCCC--ceeEEeeccceechhhhccceecCCeEEEEccCCccCCCCCC
Q 005056 299 EFILQVPFYPPQQNLEDFSPEICEKLIFKLVGWELS--DIDVIDIKPWVMHAEVAEKFLCCYNQIILAGDACHRFPPAGG 376 (716)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~e~~~~~i~~~~g~~~~--~~~i~~~~~w~~~~~~a~~~~~~~gRV~LvGDAAH~~~P~gG 376 (716)
...+.+.+.. ...+++...+.+++.++..+. ...++ .+.....+++. .+||+|+|||||.++|+.|
T Consensus 288 ~~~~g~~~~~-----~~~~~~~~~~~l~~~~~~~~~~~~~~~~-----~~~~~~~~~~~--~~rv~liGDAAh~~~P~~g 355 (511)
T 2weu_A 288 RDGNGYVYSD-----EFISPEEAERELRSTVAPGRDDLEANHI-----QMRIGRNERTW--INNCVAVGLSAAFVEPLES 355 (511)
T ss_dssp EEEEEEEECT-----TTSCHHHHHHHHHHHHCTTCTTSCCEEE-----ECCCEEESCSE--ETTEEECGGGTEECCGGGC
T ss_pred ceEEEEEECC-----CCCCHHHHHHHHHHHhCcccccccceeE-----Eeecccccccc--CCCEEEEechhhccCcccc
Confidence 3333222221 123556666677777765421 12222 11222344554 3999999999999999999
Q ss_pred ccchhhHhHHHHHHHHHHHHHcCCCchhHHHHHHHHHhHHHHHHHHHHHHHHH
Q 005056 377 FGMNTGVQDAHNLAWKIASVLKDIAPASILNTYETERKPIAEFNTALSVQNFR 429 (716)
Q Consensus 377 ~G~n~gi~DA~~LawkLa~vl~g~a~~~lL~sY~~eRrp~a~~~~~~s~~~~~ 429 (716)
+|+|+|++||..|++.|. ++...+.+|+.|+++|+++.+.+.+.....+.
T Consensus 356 ~G~~~a~~da~~La~~l~---~~~~~~~~l~~Y~~~~~~~~~~~~~~~~~~y~ 405 (511)
T 2weu_A 356 TGIFFIQHAIEQLVKHFP---GERWDPVLISAYNERMAHMVDGVKEFLVLHYK 405 (511)
T ss_dssp CHHHHHHHHHHHHHHTCC---CTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 999999999999998876 24456789999999999999887776655554
No 27
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=99.95 E-value=1.9e-28 Score=276.44 Aligned_cols=308 Identities=20% Similarity=0.226 Sum_probs=195.8
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCCCCCCCeeeeChhHHHHHHhhhchHHHHHhcCCCccccceeEE
Q 005056 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIY 120 (716)
Q Consensus 41 ~~~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~~~~p~a~~i~~rtmeilr~l~Gl~~~l~~~~~~~~~~~~~~~ 120 (716)
...+||+||||||+||++|+.|+++|++|+||||.+.+.. .+...+.+++++.|+.+ |+.+.... +
T Consensus 90 ~~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~~g~-~~~~~~~~~~~~~l~~~-g~~~~~~~----------~-- 155 (497)
T 2bry_A 90 CTNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIKFSR-HNVLHLWPFTIHDLRAL-GAKKFYGR----------F-- 155 (497)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSSCCC-CCEEECCHHHHHHHHTT-THHHHCTT----------T--
T ss_pred cCCCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccccCC-CCcccCChhHHHHHHHc-CCcccccc----------c--
Confidence 4568999999999999999999999999999999987643 35677889999999998 88653100 0
Q ss_pred eecCCCCceeeccCCCccccccccCCccccccChHHHHHHHHHHHHhcCceeecccccccccccccccceEEeCcEEEEE
Q 005056 121 CTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSV 200 (716)
Q Consensus 121 ~~~~~g~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~l~~~~~~~~~v~~g~~v~~i 200 (716)
. ......+++..++..|.+.+.+.|+ +|+++++|+++
T Consensus 156 ----~--------------------~~~~~~~~~~~l~~~L~~~~~~~gv-------------------~v~~~~~v~~i 192 (497)
T 2bry_A 156 ----C--------------------TGTLDHISIRQLQLLLLKVALLLGV-------------------EIHWGVKFTGL 192 (497)
T ss_dssp ----T--------------------CTTCCEEEHHHHHHHHHHHHHHTTC-------------------EEEESCEEEEE
T ss_pred ----c--------------------ccccccCCHHHHHHHHHHHHHhCCC-------------------EEEeCCEEEEE
Confidence 0 0001246788999999999988877 99999999999
Q ss_pred Eec---CCeEEEEEEeccCCceeeEEEEecEEEecCCCChhhhhhcCCCccccccccceEEEEEecCccccccccCCCce
Q 005056 201 SAT---DQCINVIASFLKEGKCTERNIQCNILIGTDGAGSTVRKLVGIDLVGEKDLQKLVSVHFLSKDLGDYLLNERPGM 277 (716)
Q Consensus 201 ~~~---~~gv~v~v~~~~~g~~~~~~i~ad~VVgADG~~S~VR~~lgi~~~g~~~~~~~~~i~~~~~~l~~~~~~~~~~~ 277 (716)
+++ ++++++++....+|+ ..++++|+||+|||++|.+|+..++++.|...+.....+... ..+.........+.
T Consensus 193 ~~~~~~~~~~~v~~~~~~~g~--~~~i~ad~VV~A~G~~S~~r~~~~~~~~g~~~~~~~~~l~~~-~~~~~~~~~~~~G~ 269 (497)
T 2bry_A 193 QPPPRKGSGWRAQLQPNPPAQ--LASYEFDVLISAAGGKFVPEGFTIREMRGKLAIGITANFVNG-RTVEETQVPEISGV 269 (497)
T ss_dssp ECCCSTTCCBEEEEESCCCHH--HHTCCBSEEEECCCTTCCCTTCEEEEEECSCCEEEEEEEECC-CCHHHHTSCCBCC-
T ss_pred EEecCCCCEEEEEEEECCCCC--EEEEEcCEEEECCCCCcccccccchhhcCceeEeeeeeeeee-ccccccchhhcCce
Confidence 875 346666664211331 236899999999999999998888777776543322211100 00000000001111
Q ss_pred EEEEEecC-----------ceEEEEEecCCCCeEEEEE-ecC------------CCC-C---CCCCCCHHHHH-------
Q 005056 278 LFFIFNTE-----------AIGVLVAHDLKEGEFILQV-PFY------------PPQ-Q---NLEDFSPEICE------- 322 (716)
Q Consensus 278 ~~~~~~~~-----------~~g~~~~~~~~~~~~~~~~-~~~------------~~~-~---~~~~~~~e~~~------- 322 (716)
.+ .+++. ....++..+. +.+.+.. +.. .+. . .....+.+.+.
T Consensus 270 ~~-~~~~~~f~~~~~~~Gi~~~~~~~~~~--~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 346 (497)
T 2bry_A 270 AR-IYNQKFFQSLLKATGIDLENIVYYKD--ETHYFVMTAKKQCLLRLGVLRQDLSETDQLLGKANVVPEALQRFARAAA 346 (497)
T ss_dssp ----CCSSHHHHHHHHHCCCEEEEEEEES--SEEEEEEEECHHHHHHTTSBSSCCSSHHHHTSTTTBCHHHHHHHHHHHH
T ss_pred EE-ecChhhhHhHHhhcCCCcccccccCC--CeEEEEeccccccccccceeeccccchHhhhhhccCCHHHHHHhhcccc
Confidence 11 11110 0111111111 1111111 100 000 0 00112222111
Q ss_pred HHH--------H---HHcCCCCCce-eEEeeccceechhhhccceecCCe-EEEEccCCc-cCCCCCCccchhhHhHHHH
Q 005056 323 KLI--------F---KLVGWELSDI-DVIDIKPWVMHAEVAEKFLCCYNQ-IILAGDACH-RFPPAGGFGMNTGVQDAHN 388 (716)
Q Consensus 323 ~~i--------~---~~~g~~~~~~-~i~~~~~w~~~~~~a~~~~~~~gR-V~LvGDAAH-~~~P~gG~G~n~gi~DA~~ 388 (716)
++- + ..+|.+...+ ++.....|++..+++++|+. || |+|+||||| .++| +|||+|+||+||.+
T Consensus 347 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~r~a~~~~~--gRr~~l~Gda~~~~~~p-~g~G~n~g~~~a~~ 423 (497)
T 2bry_A 347 DFATHGKLGKLEFAQDARGRPDVAAFDFTSMMRAESSARVQEKHGA--RLLLGLVGDCLVEPFWP-LGTGVARGFLAAFD 423 (497)
T ss_dssp HHHTTTTTCSCCBCBCTTSSBCEEEEECSEEEEESCSEEEEEETTE--EEEEEECGGGTBCCCGG-GCCHHHHHHHHHHH
T ss_pred ccchhhccccchhhhhccCCCCCceeeeEEEEecchhhHHHHhcCC--cccceEeccccccCcCc-cccchhhHHHHHHH
Confidence 111 1 1122221222 44556688999999999985 88 999999999 5666 99999999999999
Q ss_pred HHHHHHHHHcCCCchhHHHHHHHHHhHHHH
Q 005056 389 LAWKIASVLKDIAPASILNTYETERKPIAE 418 (716)
Q Consensus 389 LawkLa~vl~g~a~~~lL~sY~~eRrp~a~ 418 (716)
|+|+|+.+++|.+...+| .||+++++
T Consensus 424 l~~~l~~~~~g~~~~~~l----~~r~~~~~ 449 (497)
T 2bry_A 424 AAWMVKRWAEGAGPLEVL----AERESLYQ 449 (497)
T ss_dssp HHHHHHHHHTTCCHHHHH----HHHHHHHT
T ss_pred HHHHHHHHhCCCCccchh----hhHHHHhh
Confidence 999999999999888888 89999775
No 28
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=99.95 E-value=4.7e-27 Score=268.60 Aligned_cols=339 Identities=12% Similarity=0.106 Sum_probs=207.8
Q ss_pred CccCCEEEECCCHHHHHHHHHHHh---CCCCEEEECCCCCCCCCCCeeeeChhHHH-HHHhhhchHHH--HHhcCCCccc
Q 005056 41 EAVVPVLIVGAGPVGLVLSILLTK---LGIKCSVLEKNKAFSTHPQAHFINNRYAL-VFRKLDGLAEE--IERSQPPVDL 114 (716)
Q Consensus 41 ~~~~dVlIVGaGpaGLt~Al~Lar---~Gi~v~liEr~~~~~~~p~a~~i~~rtme-ilr~l~Gl~~~--l~~~~~~~~~ 114 (716)
+..+||+||||||+|+++|+.|++ .|++|+||||.+.+... .+..+.+++++ +++.+ |+.+. +.........
T Consensus 23 ~~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~~~~~~-~g~~~~p~~~~~~l~~l-Gi~~~~~~~~~~~~~~~ 100 (550)
T 2e4g_A 23 GKIDKILIVGGGTAGWMAASYLGKALQGTADITLLQAPDIPTLG-VGEATIPNLQTAFFDFL-GIPEDEWMRECNASYKV 100 (550)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHHHHTTTSSEEEEEECCCCCCCC-CCEECCTHHHHHTHHHH-TCCHHHHHHHTTCEEEC
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhhcCCCCcEEEEeCCCCCccc-eeeeechhHHHHHHHHh-CCChHHHHHhcCCeEEE
Confidence 346899999999999999999999 99999999997654433 46788999999 99999 98765 5544322211
Q ss_pred ------ccee---------------EEeecCCCCc-------eeec----c-----CCC----------ccccc------
Q 005056 115 ------WRKF---------------IYCTSVTGPI-------LGSV----D-----HMQ----------PQDFE------ 141 (716)
Q Consensus 115 ------~~~~---------------~~~~~~~g~~-------l~~~----~-----~~~----------~~~~~------ 141 (716)
|... .+.... |.. +... . ... ..++.
T Consensus 101 g~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~-g~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (550)
T 2e4g_A 101 AIKFINWRTAGEGTSEARELDGGPDHFYHSF-GLLKYHEQIPLSHYWFDRSYRGKTVEPFDYACYKEPVILDANRSPRRL 179 (550)
T ss_dssp EEEEESSSSCCCCCSSCCEETTEESEEEEES-SCCCEETTEEHHHHHHHHHHTTSCCCCHHHHHCSHHHHHHTTBCSBCT
T ss_pred eeeEeecccccccccccccccCCCCeeEecC-CccCCCCcccHHHHHHhhcccccccccccccccchhhHHHhhhhhHhh
Confidence 1100 000000 000 0000 0 000 00000
Q ss_pred -cccCCccccccChHHHHHHHHHHHHhc-CceeecccccccccccccccceEEeCcEEEEEEecCCeEEEEEEeccCCce
Q 005056 142 -KVVSPVSVAHFSQYKLNKLLLKQLEKL-NFKICTSEGTEGLHNHLLQGREILMGHECVSVSATDQCINVIASFLKEGKC 219 (716)
Q Consensus 142 -~~~~p~~~~~i~q~~Le~~L~~~~~~~-g~~~~~~~~~~~l~~~~~~~~~v~~g~~v~~i~~~~~gv~v~v~~~~~g~~ 219 (716)
........+++++..|.+.|.+.+.+. |+ +++++ +|+++++++++..+.+.. .+|+
T Consensus 180 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~~Gv-------------------~i~~~-~V~~i~~~~~g~~~~v~~-~~G~- 237 (550)
T 2e4g_A 180 DGSKVTNYAWHFDAHLVADFLRRFATEKLGV-------------------RHVED-RVEHVQRDANGNIESVRT-ATGR- 237 (550)
T ss_dssp TSCBCSCCEEEECHHHHHHHHHHHHHHHSCC-------------------EEEEC-CEEEEEECTTSCEEEEEE-TTSC-
T ss_pred cCCCCCCcceEEcHHHHHHHHHHHHHhcCCc-------------------EEEEC-eEeEEEEcCCCCEEEEEE-CCCC-
Confidence 000011235689999999999999988 87 89999 999999876663333432 2453
Q ss_pred eeEEEEecEEEecCCCChhh-hhhcCCCccccccc---cceEEEEEecCccccccccCCCceEEEEEecCceEEEEEecC
Q 005056 220 TERNIQCNILIGTDGAGSTV-RKLVGIDLVGEKDL---QKLVSVHFLSKDLGDYLLNERPGMLFFIFNTEAIGVLVAHDL 295 (716)
Q Consensus 220 ~~~~i~ad~VVgADG~~S~V-R~~lgi~~~g~~~~---~~~~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 295 (716)
+++||+||+|||.+|.+ ++.+|+.+.+.... ...+.+...... . .....+... ....+..+.++++..
T Consensus 238 ---~i~ad~vI~A~G~~S~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~-~~~~~~g~~~~ipl~- 309 (550)
T 2e4g_A 238 ---VFDADLFVDCSGFRGLLINKAMEEPFLDMSDHLLNDSAVATQVPHDD--D-ANGVEPFTS-AIAMKSGWTWKIPML- 309 (550)
T ss_dssp ---EEECSEEEECCGGGCCCCCCCTCCCEEECTTTCCCCEEEEEEEECCH--H-HHCCCSSEE-EEECSSEEEEEEECS-
T ss_pred ---EEECCEEEECCCCchhhHHHHhCCCcccccccccccceEEEeecccC--C-cccCCCcee-eeecCCceEEEccCC-
Confidence 68999999999999999 66778765433211 122222221110 0 000111111 112233223333322
Q ss_pred CCCeEEEEEecCCCCCCCCCCCHHHHHHHHHHHcCCCC--CceeEEeeccceechhhhccceecCCeEEEEccCCccCCC
Q 005056 296 KEGEFILQVPFYPPQQNLEDFSPEICEKLIFKLVGWEL--SDIDVIDIKPWVMHAEVAEKFLCCYNQIILAGDACHRFPP 373 (716)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~e~~~~~i~~~~g~~~--~~~~i~~~~~w~~~~~~a~~~~~~~gRV~LvGDAAH~~~P 373 (716)
. .......+.. ...+++...+.+++.++..+ .....+ .+.....+++. .+||+|+|||||.++|
T Consensus 310 -~-~~~~g~v~~~-----~~~~~~~~~~~l~~~~~~~p~l~~~~~i-----~~~~~~~~~~~--~~rvvliGDAAh~~~P 375 (550)
T 2e4g_A 310 -G-RFGTGYVYSS-----RFATEDEAVREFCEMWHLDPETQPLNRI-----RFRVGRNRRAW--VGNCVSIGTSSCFVEP 375 (550)
T ss_dssp -S-EEEEEEEECT-----TTSCHHHHHHHHHHHTTCCTTTSCCEEE-----ECCCEEESCSE--ETTEEECSTTTEECCG
T ss_pred -C-ccceEEEEec-----CCCChHHHHHHHHHhhCcCcccCCCceE-----EecCCCccccc--cCCEEEEehhhcccCc
Confidence 1 2222111111 12355666677777776542 112222 22223345555 3999999999999999
Q ss_pred CCCccchhhHhHHHHHHHHHHHHHcCCCchhHHHHHHHHHhHHHHHHHHHHHHHHH
Q 005056 374 AGGFGMNTGVQDAHNLAWKIASVLKDIAPASILNTYETERKPIAEFNTALSVQNFR 429 (716)
Q Consensus 374 ~gG~G~n~gi~DA~~LawkLa~vl~g~a~~~lL~sY~~eRrp~a~~~~~~s~~~~~ 429 (716)
+.|+|+|+|++||.+|++.|. ++...+.+|++|+++|+++...+.+....++.
T Consensus 376 ~~GqGi~~a~~da~~La~~L~---~~~~~~~~l~~Y~~~~~~~~~~i~~~~~~~y~ 428 (550)
T 2e4g_A 376 LESTGIYFVYAALYQLVKHFP---DKSLNPVLTARFNREIETMFDDTRDFIQAHFY 428 (550)
T ss_dssp GGSCHHHHHHHHHHHHHHTCC---CTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchhhHHHHHHHHHHHHHhcc---ccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999998775 34567889999999999999988887766665
No 29
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=99.93 E-value=1.3e-24 Score=241.00 Aligned_cols=326 Identities=14% Similarity=0.036 Sum_probs=170.6
Q ss_pred ccCCCCccCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCCCCC-C---CeeeeChhHHHHHHhhhchHHHHHhcCCC
Q 005056 36 TIVSNEAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTH-P---QAHFINNRYALVFRKLDGLAEEIERSQPP 111 (716)
Q Consensus 36 ~~~~~~~~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~~~~-p---~a~~i~~rtmeilr~l~Gl~~~l~~~~~~ 111 (716)
|.++..++.||+||||||+||++|+.|+++|++|+||||++..... + ....+...+++.++.+ |+.. ......+
T Consensus 15 ~~~~~~m~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~g~~~~~~~~~~~~~~~~~~l-g~~~-~~~~~~~ 92 (430)
T 3ihm_A 15 VPRGSHMKKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRKPDEYSGLRLLNTVAHNAVTVQREVAL-DVNE-WPSEEFG 92 (430)
T ss_dssp --------CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCCGGGSTTSCCCCCCCBCHHHHHHHHHT-TCCC-SCHHHHC
T ss_pred ecccCcCCCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCChHhhcccccccchhccchhhhhhhhc-Chhh-hhhhccc
Confidence 3343445579999999999999999999999999999998733211 1 1234556788888777 6521 0000011
Q ss_pred ccccceeEEeecCCCCceeeccCCCccccccccCCccccccChHHHHHHHHHHHHhcCceeecccccccccccccccceE
Q 005056 112 VDLWRKFIYCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREI 191 (716)
Q Consensus 112 ~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~l~~~~~~~~~v 191 (716)
. ....... .+... .++.... ......+++..+.+.|.+.+.+.|+ ++
T Consensus 93 ~---~~~~~~~--~~~~~--------~~~~~~~-~~~~~~v~~~~l~~~L~~~~~~~Gv-------------------~v 139 (430)
T 3ihm_A 93 Y---FGHYYYV--GGPQP--------MRFYGDL-KAPSRAVDYRLYQPMLMRALEARGG-------------------KF 139 (430)
T ss_dssp E---EEEEEEE--CSSSC--------EEEEEEE-EEEEBEECHHHHHHHHHHHHHHTTC-------------------EE
T ss_pred c---cceeEEE--CCCCc--------cccchhc-CCcceeecHHHHHHHHHHHHHHcCC-------------------EE
Confidence 1 1111000 11100 0111000 1123567899999999999998887 55
Q ss_pred EeCcEEEEEEecCCeEEEEEEeccCCceeeEEEEecEEEecCCCChhhhhhcCCCcc--ccccccceEE-EEEecCcccc
Q 005056 192 LMGHECVSVSATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGSTVRKLVGIDLV--GEKDLQKLVS-VHFLSKDLGD 268 (716)
Q Consensus 192 ~~g~~v~~i~~~~~gv~v~v~~~~~g~~~~~~i~ad~VVgADG~~S~VR~~lgi~~~--g~~~~~~~~~-i~~~~~~l~~ 268 (716)
++.. +++. +.+ +...++|+||+|||.+|.+|. ++.... .....+..+. ..+.. +..
T Consensus 140 ~~~~-------------v~~~---~l~--~~~~~ad~VV~AdG~~S~~~~-~~~~~~~~~~~~p~r~~~~~~~~g--~~~ 198 (430)
T 3ihm_A 140 CYDA-------------VSAE---DLE--GLSEQYDLLVVCTGKYALGKV-FEKQSENSPFEKPQRALCVGLFKG--IKE 198 (430)
T ss_dssp EECC-------------CCGG---GHH--HHHTTSSEEEECCCCTTGGGG-SCBCGGGCCCSSCSSEEEEEEEES--BCC
T ss_pred EEEe-------------cchh---hhh--hhcccCCEEEECCCCcchHHh-ccCCCCCCcccCCCeeEEEEEEcc--CCC
Confidence 4421 0000 000 001258999999999998874 332211 1111222222 22221 111
Q ss_pred ccccCCCceEEEEEecCceEEEEEecCCCCeEEEEEec-CCCC--CCCCCC----CHHH----HHHHHHHHcC-------
Q 005056 269 YLLNERPGMLFFIFNTEAIGVLVAHDLKEGEFILQVPF-YPPQ--QNLEDF----SPEI----CEKLIFKLVG------- 330 (716)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~----~~e~----~~~~i~~~~g------- 330 (716)
.......+.++.+.+..++++....++...+.+.+ .+.. +..... +++. +.+.++...+
T Consensus 199 ---~~~~~~~~~~~~~~G~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (430)
T 3ihm_A 199 ---APIRAVTMSFSPGHGELIEIPTLSFNGMSTALVLENHIGSDLEVLAHTKYDDDPRAFLDLMLEKLGKHHPSVAERID 275 (430)
T ss_dssp ---CSSCCEEEEEETTTEEEEEEEEEETTEEEEEEEEEECTTSSSGGGGTSCTTTCHHHHHHHHHHHHHHHCHHHHTTBC
T ss_pred ---CCcCeeeeeecCCCcceEEecccCCCcceEEEEEEecCCCcHHHhccccCCCCHHHHHHHHHHHHHHhCccHHHHHh
Confidence 11122233333222222333322122222221111 1211 111111 4442 3333333221
Q ss_pred CCC--C---ceeEEeeccceechhhhccceecCCeEEE-EccCCccCCCCCCccchhhHhHHHHHHHHHHHHHcCCCchh
Q 005056 331 WEL--S---DIDVIDIKPWVMHAEVAEKFLCCYNQIIL-AGDACHRFPPAGGFGMNTGVQDAHNLAWKIASVLKDIAPAS 404 (716)
Q Consensus 331 ~~~--~---~~~i~~~~~w~~~~~~a~~~~~~~gRV~L-vGDAAH~~~P~gG~G~n~gi~DA~~LawkLa~vl~g~a~~~ 404 (716)
... . ...+.....|........+|. .||++| +|||||.++|++|||+|+||+||.+|+|+|+.. +. .+.
T Consensus 276 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~--~~~~~ll~GDAah~~~p~~g~G~~~a~~da~~l~~~l~~~--~~-~~~ 350 (430)
T 3ihm_A 276 PAEFDLANSSLDILQGGVVPAFRDGHATLN--NGKTIIGLGDIQATVDPVLGQGANMASYAAWILGEEILAH--SV-YDL 350 (430)
T ss_dssp TTTCEESSSTTSEEEECCCCEEBCSEEECT--TSCEEEECGGGTEECCGGGCCHHHHHHHHHHHHHHHHHHC--SC-CSH
T ss_pred hchhccccCccceeecceeecccccccccC--CCCEEEEecCccccCCCchhhhHHHHHHHHHHHHHHHHhc--CC-HHH
Confidence 110 0 112222233444444556665 488888 999999999999999999999999999999975 32 678
Q ss_pred HHHHHHHHHh-HHHHHHHHHHH
Q 005056 405 ILNTYETERK-PIAEFNTALSV 425 (716)
Q Consensus 405 lL~sY~~eRr-p~a~~~~~~s~ 425 (716)
+|.+|+.+|+ ++++...+++.
T Consensus 351 ~~~~~~~~r~~~~~~~~~~~~~ 372 (430)
T 3ihm_A 351 RFSEHLERRRQDRVLCATRWTN 372 (430)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999 66666655554
No 30
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.75 E-value=4.6e-17 Score=173.53 Aligned_cols=293 Identities=15% Similarity=0.193 Sum_probs=146.5
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCCCCCCC------------eeeeC---hhHHHHHHhhhchHHHHHh
Q 005056 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQ------------AHFIN---NRYALVFRKLDGLAEEIER 107 (716)
Q Consensus 43 ~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~~~~p~------------a~~i~---~rtmeilr~l~Gl~~~l~~ 107 (716)
++||+||||||+||++|+.|+++|++|+||||.+.+..... ...+. +...++++.+ ..
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~ 74 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKRSDAGALDMGAQYFTARDRRFATAVKQW-------QA 74 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEEETTEEEECSCCCBCCCSHHHHHHHHHH-------HH
T ss_pred CceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCCcccceeEecCCCeEecCCCeEecCCHHHHHHHHHH-------Hh
Confidence 36999999999999999999999999999999976522111 11222 2233333332 11
Q ss_pred cCCCccccc-eeEEeecCCCCceeeccCCCccccccccCCccccccChHHHHHHHHHHHHhcCceeeccccccccccccc
Q 005056 108 SQPPVDLWR-KFIYCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLL 186 (716)
Q Consensus 108 ~~~~~~~~~-~~~~~~~~~g~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~l~~~~~ 186 (716)
.+... .|. .+... ....+.. . ... + .....+..+.. |.+.+.+ ++
T Consensus 75 ~~~~~-~~~~~~~~~---~~~~~~~---~-~~~------~--~~~~~~~~~~~-l~~~l~~-g~---------------- 120 (336)
T 1yvv_A 75 QGHVA-EWTPLLYNF---HAGRLSP---S-PDE------Q--VRWVGKPGMSA-ITRAMRG-DM---------------- 120 (336)
T ss_dssp HTSEE-EECCCEEEE---SSSBCCC---C-CTT------S--CEEEESSCTHH-HHHHHHT-TC----------------
T ss_pred CCCee-eccccceec---cCccccc---C-CCC------C--ccEEcCccHHH-HHHHHHc-cC----------------
Confidence 11111 111 11111 0000000 0 000 0 00111112222 2233322 44
Q ss_pred ccceEEeCcEEEEEEecCCeEEEEEEeccCCceeeEEEEecEEEecCCCChhhhhhcCCC-----ccccccccceEEEEE
Q 005056 187 QGREILMGHECVSVSATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGSTVRKLVGID-----LVGEKDLQKLVSVHF 261 (716)
Q Consensus 187 ~~~~v~~g~~v~~i~~~~~gv~v~v~~~~~g~~~~~~i~ad~VVgADG~~S~VR~~lgi~-----~~g~~~~~~~~~i~~ 261 (716)
+|+++++|+++++++++++++.. +|+ ...++|+||+|||++|.+|...+++ .... .+.....+.+
T Consensus 121 ---~i~~~~~v~~i~~~~~~~~v~~~---~g~---~~~~a~~vV~a~g~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~ 190 (336)
T 1yvv_A 121 ---PVSFSCRITEVFRGEEHWNLLDA---EGQ---NHGPFSHVIIATPAPQASTLLAAAPKLASVVAGV-KMDPTWAVAL 190 (336)
T ss_dssp ---CEECSCCEEEEEECSSCEEEEET---TSC---EEEEESEEEECSCHHHHGGGGTTCHHHHHHHTTC-CEEEEEEEEE
T ss_pred ---cEEecCEEEEEEEeCCEEEEEeC---CCc---CccccCEEEEcCCHHHHHHhhccCHHHHHHHhhc-CccceeEEEE
Confidence 89999999999999999877643 453 2346999999999999998653321 1111 1222232222
Q ss_pred ecCccccccccCCCceEEEEEecCceEEEEEe---cCCCC---eEEEEEecCCCCCCCCCCCHHHHHHH----HHHHcCC
Q 005056 262 LSKDLGDYLLNERPGMLFFIFNTEAIGVLVAH---DLKEG---EFILQVPFYPPQQNLEDFSPEICEKL----IFKLVGW 331 (716)
Q Consensus 262 ~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~~---~~~~~---~~~~~~~~~~~~~~~~~~~~e~~~~~----i~~~~g~ 331 (716)
..+.- + . .+...++ ...+..+++... +...+ .|+++.... ......+.+++.+.+. +++.+|.
T Consensus 191 ~~~~~--~--~-~~~~~~~-~~~~~~~~l~~~~~~p~~~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~~lg~ 263 (336)
T 1yvv_A 191 AFETP--L--Q-TPMQGCF-VQDSPLDWLARNRSKPERDDTLDTWILHATSQ-WSRQNLDASREQVIEHLHGAFAELIDC 263 (336)
T ss_dssp EESSC--C--S-CCCCEEE-ECSSSEEEEEEGGGSTTCCCSSEEEEEEECHH-HHHHTTTSCHHHHHHHHHHHHHTTCSS
T ss_pred EecCC--C--C-CCCCeEE-eCCCceeEEEecCcCCCCCCCCcEEEEEeCHH-HHHHHHhCCHHHHHHHHHHHHHHHhCC
Confidence 22110 0 0 1111112 222223333221 11122 355554210 0112234455544333 3445564
Q ss_pred CCCceeEEeeccceech----hhhccceecCCeEEEEccCCccCCCCCCccchhhHhHHHHHHHHHHHHHcC
Q 005056 332 ELSDIDVIDIKPWVMHA----EVAEKFLCCYNQIILAGDACHRFPPAGGFGMNTGVQDAHNLAWKIASVLKD 399 (716)
Q Consensus 332 ~~~~~~i~~~~~w~~~~----~~a~~~~~~~gRV~LvGDAAH~~~P~gG~G~n~gi~DA~~LawkLa~vl~g 399 (716)
............|.... .....+....+||+|+|||+|. .|+|.|+.++..||..|...++.
T Consensus 264 ~~~~p~~~~~~rw~~a~~~~~~~~~~~~~~~~rl~laGDa~~g------~gv~~a~~sg~~lA~~l~~~~~~ 329 (336)
T 1yvv_A 264 TMPAPVFSLAHRWLYARPAGAHEWGALSDADLGIYVCGDWCLS------GRVEGAWLSGQEAARRLLEHLQL 329 (336)
T ss_dssp CCCCCSEEEEEEEEEEEESSCCCCSCEEETTTTEEECCGGGTT------SSHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCCCCcEEEccccCccCCCCCCCCCeeecCCCCEEEEecCCCC------CCHHHHHHHHHHHHHHHHHHhhh
Confidence 32222333444554321 1111221224899999999973 48999999988888888776543
No 31
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=99.64 E-value=3.3e-15 Score=163.36 Aligned_cols=218 Identities=9% Similarity=0.096 Sum_probs=122.7
Q ss_pred ccChHHHHHHHHHHHHhcCceeecccccccccccccccceEEeCcEEEEEEecCCeEEEEEEeccCCceeeEEEEecEEE
Q 005056 151 HFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSATDQCINVIASFLKEGKCTERNIQCNILI 230 (716)
Q Consensus 151 ~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~l~~~~~~~~~v~~g~~v~~i~~~~~gv~v~v~~~~~g~~~~~~i~ad~VV 230 (716)
.++...+...|.+.+++.|+ +++++++|++++.+++.+. .+.. ++| ++++|+||
T Consensus 170 ~~~~~~~~~~l~~~~~~~g~-------------------~i~~~~~v~~i~~~~~~~~-~v~~-~~g-----~~~a~~vV 223 (405)
T 2gag_B 170 IAKHDHVAWAFARKANEMGV-------------------DIIQNCEVTGFIKDGEKVT-GVKT-TRG-----TIHAGKVA 223 (405)
T ss_dssp BCCHHHHHHHHHHHHHHTTC-------------------EEECSCCEEEEEESSSBEE-EEEE-TTC-----CEEEEEEE
T ss_pred cCCHHHHHHHHHHHHHHCCC-------------------EEEcCCeEEEEEEeCCEEE-EEEe-CCc-----eEECCEEE
Confidence 44556788889999988887 9999999999998776643 2221 233 58999999
Q ss_pred ecCCCCh-hhhhhcCCCccccccccceEEEEEecCccccccccCCCceEEEEEecCceEEEEEecCCCCeEEEEEecCCC
Q 005056 231 GTDGAGS-TVRKLVGIDLVGEKDLQKLVSVHFLSKDLGDYLLNERPGMLFFIFNTEAIGVLVAHDLKEGEFILQVPFYPP 309 (716)
Q Consensus 231 gADG~~S-~VR~~lgi~~~g~~~~~~~~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 309 (716)
.|+|++| .+++.+|+...........+.. . .+... .... ++.++...++.+. .++.+.+.....+.
T Consensus 224 ~a~G~~s~~l~~~~g~~~~~~~~~~~~~~~--~--~~~~~----~~~~---~~~~~~~~y~~p~--~~g~~~ig~~~~~~ 290 (405)
T 2gag_B 224 LAGAGHSSVLAEMAGFELPIQSHPLQALVS--E--LFEPV----HPTV---VMSNHIHVYVSQA--HKGELVMGAGIDSY 290 (405)
T ss_dssp ECCGGGHHHHHHHHTCCCCEEEEEEEEEEE--E--EBCSC----CCSE---EEETTTTEEEEEC--TTSEEEEEEEECSS
T ss_pred ECCchhHHHHHHHcCCCCCccccceeEEEe--c--CCccc----cCce---EEeCCCcEEEEEc--CCCcEEEEeccCCC
Confidence 9999998 6888888765433222222211 1 11111 0111 1122222222221 23455554332211
Q ss_pred CCCCCCCCHHH---HHHHHHHHcCCCCCceeEEeeccceechhhhccceecCCeEEEEccCCccCCCCCCccch-hhHhH
Q 005056 310 QQNLEDFSPEI---CEKLIFKLVGWELSDIDVIDIKPWVMHAEVAEKFLCCYNQIILAGDACHRFPPAGGFGMN-TGVQD 385 (716)
Q Consensus 310 ~~~~~~~~~e~---~~~~i~~~~g~~~~~~~i~~~~~w~~~~~~a~~~~~~~gRV~LvGDAAH~~~P~gG~G~n-~gi~D 385 (716)
.......+++. +.+.+++.+.. ....++. ..|.-. ..+. .++.+++|++. .-.-+...|++ .|+..
T Consensus 291 ~~~~~~~~~~~~~~l~~~~~~~~p~-l~~~~~~--~~w~g~----~~~t--~d~~p~ig~~~-~~~l~~~~G~~g~G~~~ 360 (405)
T 2gag_B 291 NGYGQRGAFHVIQEQMAAAVELFPI-FARAHVL--RTWGGI----VDTT--MDASPIISKTP-IQNLYVNCGWGTGGFKG 360 (405)
T ss_dssp CCCSSCCCTHHHHHHHHHHHHHCGG-GGGCEEC--EEEEEE----EEEE--TTSCCEEEECS-SBTEEEEECCGGGCSTT
T ss_pred CccccCCCHHHHHHHHHHHHHhCCc-cccCCcc--eEEeec----cccC--CCCCCEecccC-CCCEEEEecCCCchhhH
Confidence 11111223333 33344444432 1122332 223211 1122 37889999975 11112334555 78999
Q ss_pred HHHHHHHHHHHHcCCCchhHHHHHHHHHhHHH
Q 005056 386 AHNLAWKIASVLKDIAPASILNTYETERKPIA 417 (716)
Q Consensus 386 A~~LawkLa~vl~g~a~~~lL~sY~~eRrp~a 417 (716)
+.+++|+|+..+.+...+.+++.|+.+|.+..
T Consensus 361 a~~~g~~la~~i~g~~~~~~~~~~~~~R~~~~ 392 (405)
T 2gag_B 361 TPGAGFTLAHTIANDEPHELNKPFSLERFETG 392 (405)
T ss_dssp HHHHHHHHHHHHHHTSCCTTTTTSCSTHHHHT
T ss_pred HHHHHHHHHHHHhCCCCCccccccCcchhcCC
Confidence 99999999999887766678999999987653
No 32
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=99.57 E-value=3.2e-14 Score=144.63 Aligned_cols=37 Identities=30% Similarity=0.539 Sum_probs=34.6
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCCC
Q 005056 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFS 79 (716)
Q Consensus 43 ~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~~ 79 (716)
++||+||||||+||++|+.|+++|++|+||||.+.+.
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~G 38 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSG 38 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCC
Confidence 4899999999999999999999999999999998763
No 33
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=99.52 E-value=8.5e-14 Score=150.96 Aligned_cols=71 Identities=20% Similarity=0.274 Sum_probs=56.5
Q ss_pred cccChHHHHHHHHHHHHhcCceeecccccccccccccccceEEeCcEEEEEEecCCeEEEEEEeccCCceeeEEEEecEE
Q 005056 150 AHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSATDQCINVIASFLKEGKCTERNIQCNIL 229 (716)
Q Consensus 150 ~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~l~~~~~~~~~v~~g~~v~~i~~~~~gv~v~v~~~~~g~~~~~~i~ad~V 229 (716)
..++...+...|.+.+.+.|+ +++++++|++++.+++++.++. ++| +++||+|
T Consensus 159 ~~~~~~~~~~~l~~~~~~~g~-------------------~i~~~~~v~~i~~~~~~~~v~~---~~g-----~~~a~~v 211 (382)
T 1ryi_A 159 VHVEPYFVCKAYVKAAKMLGA-------------------EIFEHTPVLHVERDGEALFIKT---PSG-----DVWANHV 211 (382)
T ss_dssp CBCCHHHHHHHHHHHHHHTTC-------------------EEETTCCCCEEECSSSSEEEEE---TTE-----EEEEEEE
T ss_pred eEEcHHHHHHHHHHHHHHCCC-------------------EEEcCCcEEEEEEECCEEEEEc---CCc-----eEEcCEE
Confidence 356677888999999998887 8999999999998888774432 222 6899999
Q ss_pred EecCCCChh-hhhhcCCCc
Q 005056 230 IGTDGAGST-VRKLVGIDL 247 (716)
Q Consensus 230 VgADG~~S~-VR~~lgi~~ 247 (716)
|.|+|.+|. +.+.+++..
T Consensus 212 V~A~G~~s~~l~~~~~~~~ 230 (382)
T 1ryi_A 212 VVASGVWSGMFFKQLGLNN 230 (382)
T ss_dssp EECCGGGTHHHHHHTTCCC
T ss_pred EECCChhHHHHHHhcCCCC
Confidence 999999987 777777543
No 34
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.48 E-value=2.8e-13 Score=146.96 Aligned_cols=69 Identities=14% Similarity=0.231 Sum_probs=55.4
Q ss_pred ccChHHHHHHHHHHHHhcCceeecccccccccccccccceEEeCcEEEEEEecCCeEE-EEEEeccCCceeeEEEEecEE
Q 005056 151 HFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSATDQCIN-VIASFLKEGKCTERNIQCNIL 229 (716)
Q Consensus 151 ~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~l~~~~~~~~~v~~g~~v~~i~~~~~gv~-v~v~~~~~g~~~~~~i~ad~V 229 (716)
.++...+...|.+.+++.|+ +++++++|++++.++++++ ++. .+| +++||+|
T Consensus 145 ~~~~~~l~~~l~~~~~~~Gv-------------------~i~~~~~v~~i~~~~~~v~gv~~---~~g-----~i~a~~V 197 (382)
T 1y56_B 145 KADPFEATTAFAVKAKEYGA-------------------KLLEYTEVKGFLIENNEIKGVKT---NKG-----IIKTGIV 197 (382)
T ss_dssp EECHHHHHHHHHHHHHHTTC-------------------EEECSCCEEEEEESSSBEEEEEE---TTE-----EEECSEE
T ss_pred eECHHHHHHHHHHHHHHCCC-------------------EEECCceEEEEEEECCEEEEEEE---CCc-----EEECCEE
Confidence 45677888889999998887 9999999999998888765 433 233 5899999
Q ss_pred EecCCCCh-hhhhhcCCC
Q 005056 230 IGTDGAGS-TVRKLVGID 246 (716)
Q Consensus 230 VgADG~~S-~VR~~lgi~ 246 (716)
|.|+|.+| .+.+.+|+.
T Consensus 198 V~A~G~~s~~l~~~~g~~ 215 (382)
T 1y56_B 198 VNATNAWANLINAMAGIK 215 (382)
T ss_dssp EECCGGGHHHHHHHHTCC
T ss_pred EECcchhHHHHHHHcCCC
Confidence 99999998 567777754
No 35
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.37 E-value=5.3e-12 Score=135.61 Aligned_cols=72 Identities=11% Similarity=0.167 Sum_probs=57.5
Q ss_pred ccChHHHHHHHHHHHHhcCceeecccccccccccccccceEEeCcEEEEEEecCCe-EEEEEEeccCCceeeEEEEecEE
Q 005056 151 HFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSATDQC-INVIASFLKEGKCTERNIQCNIL 229 (716)
Q Consensus 151 ~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~l~~~~~~~~~v~~g~~v~~i~~~~~g-v~v~v~~~~~g~~~~~~i~ad~V 229 (716)
.++...+...|.+.+++.|+ +|+++++|++++.++++ +.+++. +|+ ..+++||+|
T Consensus 146 ~~~~~~~~~~l~~~~~~~Gv-------------------~i~~~~~v~~i~~~~~~~~~v~~~---~g~--~~~~~a~~V 201 (369)
T 3dme_A 146 IVDSHALMLAYQGDAESDGA-------------------QLVFHTPLIAGRVRPEGGFELDFG---GAE--PMTLSCRVL 201 (369)
T ss_dssp EECHHHHHHHHHHHHHHTTC-------------------EEECSCCEEEEEECTTSSEEEEEC---TTS--CEEEEEEEE
T ss_pred EECHHHHHHHHHHHHHHCCC-------------------EEECCCEEEEEEEcCCceEEEEEC---CCc--eeEEEeCEE
Confidence 45667888999999999887 99999999999988776 665443 443 247999999
Q ss_pred EecCCCCh-hhhhhc-CCC
Q 005056 230 IGTDGAGS-TVRKLV-GID 246 (716)
Q Consensus 230 VgADG~~S-~VR~~l-gi~ 246 (716)
|.|+|++| .+.+.+ |++
T Consensus 202 V~A~G~~s~~l~~~~~g~~ 220 (369)
T 3dme_A 202 INAAGLHAPGLARRIEGIP 220 (369)
T ss_dssp EECCGGGHHHHHHTEETSC
T ss_pred EECCCcchHHHHHHhcCCC
Confidence 99999998 567777 765
No 36
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=99.37 E-value=8.4e-12 Score=135.42 Aligned_cols=173 Identities=14% Similarity=0.170 Sum_probs=97.3
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCCC--CC--CCeeeeCh------hHHHHH-HhhhchHHHHHhc-CC
Q 005056 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFS--TH--PQAHFINN------RYALVF-RKLDGLAEEIERS-QP 110 (716)
Q Consensus 43 ~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~~--~~--p~a~~i~~------rtmeil-r~l~Gl~~~l~~~-~~ 110 (716)
++||+|||||++|+++|+.|+++|++|+||||..... .. ..+..+.+ ...++. +.+ .+++++.+. +.
T Consensus 3 ~~dvvIIGaG~~Gl~~A~~La~~G~~V~vie~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~l~~~~~~ 81 (389)
T 2gf3_A 3 HFDVIVVGAGSMGMAAGYQLAKQGVKTLLVDAFDPPHTNGSHHGDTRIIRHAYGEGREYVPLALRSQ-ELWYELEKETHH 81 (389)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSSCSSSSSCSSEEEECSSCTTCGGGHHHHHHHH-HHHHHHHHHCSS
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCcchhhhhhhcCCchHHHHHHHHH-HHHHHHHHHhCC
Confidence 4899999999999999999999999999999987543 11 11222211 111221 122 344444332 21
Q ss_pred CccccceeEEeecC-C--------------CCceeeccC-------C--Ccccc-ccccCCccccccChHHHHHHHHHHH
Q 005056 111 PVDLWRKFIYCTSV-T--------------GPILGSVDH-------M--QPQDF-EKVVSPVSVAHFSQYKLNKLLLKQL 165 (716)
Q Consensus 111 ~~~~~~~~~~~~~~-~--------------g~~l~~~~~-------~--~~~~~-~~~~~p~~~~~i~q~~Le~~L~~~~ 165 (716)
+.-......+.... . |.....++. . ..... .....|. ...++...+...|.+.+
T Consensus 82 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~ 160 (389)
T 2gf3_A 82 KIFTKTGVLVFGPKGESAFVAETMEAAKEHSLTVDLLEGDEINKRWPGITVPENYNAIFEPN-SGVLFSENCIRAYRELA 160 (389)
T ss_dssp CCEECCCEEEEEETTCCHHHHHHHHHHHHTTCCCEEEETHHHHHHSTTCCCCTTEEEEEETT-CEEEEHHHHHHHHHHHH
T ss_pred cceeecceEEEcCCCchHHHHHHHHHHHHcCCCcEEcCHHHHHHhCCCcccCCCceEEEeCC-CcEEeHHHHHHHHHHHH
Confidence 11000001111100 0 000000000 0 00000 0000111 12344567888899999
Q ss_pred HhcCceeecccccccccccccccceEEeCcEEEEEEecCCeEEEEEEeccCCceeeEEEEecEEEecCCCChh-hhhhcC
Q 005056 166 EKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGST-VRKLVG 244 (716)
Q Consensus 166 ~~~g~~~~~~~~~~~l~~~~~~~~~v~~g~~v~~i~~~~~gv~v~v~~~~~g~~~~~~i~ad~VVgADG~~S~-VR~~lg 244 (716)
++.|+ +++++++|++++.+++++.++. +++ +++||+||.|+|++|. +.+.++
T Consensus 161 ~~~Gv-------------------~i~~~~~v~~i~~~~~~~~v~~---~~g-----~~~a~~vV~A~G~~~~~l~~~~g 213 (389)
T 2gf3_A 161 EARGA-------------------KVLTHTRVEDFDISPDSVKIET---ANG-----SYTADKLIVSMGAWNSKLLSKLN 213 (389)
T ss_dssp HHTTC-------------------EEECSCCEEEEEECSSCEEEEE---TTE-----EEEEEEEEECCGGGHHHHGGGGT
T ss_pred HHCCC-------------------EEEcCcEEEEEEecCCeEEEEe---CCC-----EEEeCEEEEecCccHHHHhhhhc
Confidence 98887 9999999999998877766543 222 5899999999999975 455555
No 37
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.36 E-value=3.2e-12 Score=140.33 Aligned_cols=143 Identities=18% Similarity=0.261 Sum_probs=90.2
Q ss_pred CCCccCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCCCCC------CCeeeeC------------h-hHHHHHHhhh
Q 005056 39 SNEAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTH------PQAHFIN------------N-RYALVFRKLD 99 (716)
Q Consensus 39 ~~~~~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~~~~------p~a~~i~------------~-rtmeilr~l~ 99 (716)
|++.++||+||||||+||++|+.|+++|++|+||||.+.+... .+....+ + .....+.++
T Consensus 23 M~~~~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~~~~~l~~~- 101 (417)
T 3v76_A 23 MVAEKQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHFCKSALARY- 101 (417)
T ss_dssp -----CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEESSTTTTHHHHHHS-
T ss_pred ccCCCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhhcCHHHHHHHHHhc-
Confidence 3456799999999999999999999999999999999865321 1111110 0 011222222
Q ss_pred c---hHHHHHhcCCCccccceeEEeecCCCCceeeccCCCccccccccCCccccccChHHHHHHHHHHHHhcCceeeccc
Q 005056 100 G---LAEEIERSQPPVDLWRKFIYCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSE 176 (716)
Q Consensus 100 G---l~~~l~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~ 176 (716)
. +.+.+...+.+... ...|. .........+.+.|.+.+++.|+
T Consensus 102 ~~~~~~~~~~~~Gi~~~~--------~~~g~--------------------~~~~~~~~~l~~~L~~~l~~~Gv------ 147 (417)
T 3v76_A 102 RPQDFVALVERHGIGWHE--------KTLGQ--------------------LFCDHSAKDIIRMLMAEMKEAGV------ 147 (417)
T ss_dssp CHHHHHHHHHHTTCCEEE--------CSTTE--------------------EEESSCHHHHHHHHHHHHHHHTC------
T ss_pred CHHHHHHHHHHcCCCcEE--------eeCCE--------------------EeeCCCHHHHHHHHHHHHHHCCC------
Confidence 1 11122222221100 00000 00123466788889999998887
Q ss_pred ccccccccccccceEEeCcEEEEEEecCCeEEEEEEeccCCceeeEEEEecEEEecCCCCh
Q 005056 177 GTEGLHNHLLQGREILMGHECVSVSATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGS 237 (716)
Q Consensus 177 ~~~~l~~~~~~~~~v~~g~~v~~i~~~~~gv~v~v~~~~~g~~~~~~i~ad~VVgADG~~S 237 (716)
+|+++++|++++.+++++.++.. +| +++||+||.|+|++|
T Consensus 148 -------------~i~~~~~V~~i~~~~~~~~V~~~---~g-----~i~ad~VIlAtG~~S 187 (417)
T 3v76_A 148 -------------QLRLETSIGEVERTASGFRVTTS---AG-----TVDAASLVVASGGKS 187 (417)
T ss_dssp -------------EEECSCCEEEEEEETTEEEEEET---TE-----EEEESEEEECCCCSS
T ss_pred -------------EEEECCEEEEEEEeCCEEEEEEC---Cc-----EEEeeEEEECCCCcc
Confidence 99999999999998888665542 33 689999999999999
No 38
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=99.35 E-value=2e-11 Score=131.96 Aligned_cols=69 Identities=19% Similarity=0.354 Sum_probs=55.1
Q ss_pred ccChHHHHHHHHHHHHhcCceeecccccccccccccccceEEeCcEEEEEEecCCeEEEEEEeccCCceeeEEEEecEEE
Q 005056 151 HFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSATDQCINVIASFLKEGKCTERNIQCNILI 230 (716)
Q Consensus 151 ~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~l~~~~~~~~~v~~g~~v~~i~~~~~gv~v~v~~~~~g~~~~~~i~ad~VV 230 (716)
.++...+...|.+.+++.|+ +|+++++|++++.+++++.|+.. +| +++||.||
T Consensus 150 ~~~~~~~~~~l~~~a~~~Gv-------------------~i~~~~~V~~i~~~~~~~~V~t~---~g-----~i~a~~VV 202 (381)
T 3nyc_A 150 DIDTDALHQGYLRGIRRNQG-------------------QVLCNHEALEIRRVDGAWEVRCD---AG-----SYRAAVLV 202 (381)
T ss_dssp EECHHHHHHHHHHHHHHTTC-------------------EEESSCCCCEEEEETTEEEEECS---SE-----EEEESEEE
T ss_pred eECHHHHHHHHHHHHHHCCC-------------------EEEcCCEEEEEEEeCCeEEEEeC---CC-----EEEcCEEE
Confidence 35567888889999998887 99999999999998887554432 33 68999999
Q ss_pred ecCCCCh-hhhhhcCCC
Q 005056 231 GTDGAGS-TVRKLVGID 246 (716)
Q Consensus 231 gADG~~S-~VR~~lgi~ 246 (716)
.|+|++| .+.+.+|+.
T Consensus 203 ~A~G~~s~~l~~~~g~~ 219 (381)
T 3nyc_A 203 NAAGAWCDAIAGLAGVR 219 (381)
T ss_dssp ECCGGGHHHHHHHHTCC
T ss_pred ECCChhHHHHHHHhCCC
Confidence 9999998 466777754
No 39
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.34 E-value=2.8e-11 Score=116.76 Aligned_cols=118 Identities=22% Similarity=0.315 Sum_probs=87.2
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCCCCCCCeeeeChhHHHHHHhhhchHHHHHhcCCCccccceeEEeec
Q 005056 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCTS 123 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~~~~p~a~~i~~rtmeilr~l~Gl~~~l~~~~~~~~~~~~~~~~~~ 123 (716)
++|+||||||+|+.+|..|++.|++|+|||+.+...... . .+ . .
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~~~~~~~--~-----------~~-----------------~------~ 45 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAGLKVLVLDGGRSKVKGV--S-----------RV-----------------P------N 45 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCTTTTC--S-----------CC-----------------C------C
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCcccCc--h-----------hh-----------------h------c
Confidence 689999999999999999999999999999987321100 0 00 0 0
Q ss_pred CCCCceeeccCCCccccccccCCccccccChHHHHHHHHHHHHhcCceeecccccccccccccccceEEeCcEEEEEEec
Q 005056 124 VTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSAT 203 (716)
Q Consensus 124 ~~g~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~l~~~~~~~~~v~~g~~v~~i~~~ 203 (716)
..+ + | ..+....+...|.+.+++.|+ +++++ +|++++.+
T Consensus 46 ~~~-------------~-----~---~~~~~~~~~~~l~~~~~~~gv-------------------~v~~~-~v~~i~~~ 84 (180)
T 2ywl_A 46 YPG-------------L-----L---DEPSGEELLRRLEAHARRYGA-------------------EVRPG-VVKGVRDM 84 (180)
T ss_dssp STT-------------C-----T---TCCCHHHHHHHHHHHHHHTTC-------------------EEEEC-CCCEEEEC
T ss_pred cCC-------------C-----c---CCCCHHHHHHHHHHHHHHcCC-------------------EEEeC-EEEEEEEc
Confidence 000 0 0 123456788888888888887 89999 99999988
Q ss_pred CCeEEEEEEeccCCceeeEEEEecEEEecCCCChhhhhhcCCC
Q 005056 204 DQCINVIASFLKEGKCTERNIQCNILIGTDGAGSTVRKLVGID 246 (716)
Q Consensus 204 ~~gv~v~v~~~~~g~~~~~~i~ad~VVgADG~~S~VR~~lgi~ 246 (716)
++++++++. +| ++++|+||.|+|.++.+++.+|++
T Consensus 85 ~~~~~v~~~---~g-----~i~ad~vI~A~G~~~~~~~~~g~~ 119 (180)
T 2ywl_A 85 GGVFEVETE---EG-----VEKAERLLLCTHKDPTLPSLLGLT 119 (180)
T ss_dssp SSSEEEECS---SC-----EEEEEEEEECCTTCCHHHHHHTCC
T ss_pred CCEEEEEEC---CC-----EEEECEEEECCCCCCCccccCCCC
Confidence 777655432 33 589999999999999888777754
No 40
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=99.31 E-value=5e-10 Score=126.07 Aligned_cols=73 Identities=15% Similarity=0.052 Sum_probs=57.1
Q ss_pred ccChHHHHHHHHHHHHhcCceeecccccccccccccccceEEeCcEEEEEEecCCeEEEEEEeccCCceeeEEEEecEEE
Q 005056 151 HFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSATDQCINVIASFLKEGKCTERNIQCNILI 230 (716)
Q Consensus 151 ~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~l~~~~~~~~~v~~g~~v~~i~~~~~gv~v~v~~~~~g~~~~~~i~ad~VV 230 (716)
.++...+...|.+.+.+.|+ +|+++++|++++.+++.+.+++.+..+|+ ..+|+||+||
T Consensus 145 ~v~~~~l~~~l~~~a~~~Gv-------------------~i~~~~~V~~l~~~~~~~~V~~~d~~~G~--~~~i~A~~VV 203 (501)
T 2qcu_A 145 WVDDARLVLANAQMVVRKGG-------------------EVLTRTRATSARRENGLWIVEAEDIDTGK--KYSWQARGLV 203 (501)
T ss_dssp EECHHHHHHHHHHHHHHTTC-------------------EEECSEEEEEEEEETTEEEEEEEETTTCC--EEEEEESCEE
T ss_pred EEcHHHHHHHHHHHHHHcCC-------------------EEEcCcEEEEEEEeCCEEEEEEEECCCCC--EEEEECCEEE
Confidence 45778899999999999887 99999999999987766666665333453 3579999999
Q ss_pred ecCCCChh-hhhh-cC
Q 005056 231 GTDGAGST-VRKL-VG 244 (716)
Q Consensus 231 gADG~~S~-VR~~-lg 244 (716)
.|+|.+|. +++. ++
T Consensus 204 ~AtG~~s~~l~~~~l~ 219 (501)
T 2qcu_A 204 NATGPWVKQFFDDGMH 219 (501)
T ss_dssp ECCGGGHHHHHHHHTC
T ss_pred ECCChhHHHHHHHhcc
Confidence 99999986 4554 54
No 41
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.30 E-value=4e-11 Score=132.56 Aligned_cols=62 Identities=10% Similarity=0.165 Sum_probs=50.9
Q ss_pred ccChHHHHHHHHHHHHhcCceeecccccccccccccccceEEeCc---EEEEEEecCCeEE-EEEEeccCCceeeEEEEe
Q 005056 151 HFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGH---ECVSVSATDQCIN-VIASFLKEGKCTERNIQC 226 (716)
Q Consensus 151 ~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~l~~~~~~~~~v~~g~---~v~~i~~~~~gv~-v~v~~~~~g~~~~~~i~a 226 (716)
.++...+...|.+.+++.|+ +|++++ +|+++..++++|+ |++. +|+ +++|
T Consensus 157 ~~~~~~~~~~L~~~a~~~Gv-------------------~i~~~t~~~~V~~i~~~~~~v~gV~t~---~G~----~i~A 210 (438)
T 3dje_A 157 WAHARNALVAAAREAQRMGV-------------------KFVTGTPQGRVVTLIFENNDVKGAVTA---DGK----IWRA 210 (438)
T ss_dssp EECHHHHHHHHHHHHHHTTC-------------------EEEESTTTTCEEEEEEETTEEEEEEET---TTE----EEEC
T ss_pred EecHHHHHHHHHHHHHhcCC-------------------EEEeCCcCceEEEEEecCCeEEEEEEC---CCC----EEEC
Confidence 44556788899999999887 999999 9999998888876 5442 452 6899
Q ss_pred cEEEecCCCChh
Q 005056 227 NILIGTDGAGST 238 (716)
Q Consensus 227 d~VVgADG~~S~ 238 (716)
|.||.|+|++|.
T Consensus 211 d~VV~AtG~~s~ 222 (438)
T 3dje_A 211 ERTFLCAGASAG 222 (438)
T ss_dssp SEEEECCGGGGG
T ss_pred CEEEECCCCChh
Confidence 999999999985
No 42
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=99.30 E-value=9.1e-10 Score=125.55 Aligned_cols=75 Identities=13% Similarity=0.026 Sum_probs=60.4
Q ss_pred ccChHHHHHHHHHHHHhcCceeecccccccccccccccceEEeCcEEEEEEecCCeEE-EEEEeccCCceeeEEEEecEE
Q 005056 151 HFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSATDQCIN-VIASFLKEGKCTERNIQCNIL 229 (716)
Q Consensus 151 ~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~l~~~~~~~~~v~~g~~v~~i~~~~~gv~-v~v~~~~~g~~~~~~i~ad~V 229 (716)
.++...|...|.+.+.+.|+ +|+++++|+++..+++++. +++.+..+|+ ..+|+|++|
T Consensus 166 ~vd~~~l~~~L~~~a~~~G~-------------------~i~~~~~V~~l~~~~g~v~gV~~~d~~tg~--~~~i~A~~V 224 (561)
T 3da1_A 166 RTDDARLTLEIMKEAVARGA-------------------VALNYMKVESFIYDQGKVVGVVAKDRLTDT--THTIYAKKV 224 (561)
T ss_dssp ECCHHHHHHHHHHHHHHTTC-------------------EEEESEEEEEEEEETTEEEEEEEEETTTCC--EEEEEEEEE
T ss_pred eEcHHHHHHHHHHHHHHcCC-------------------EEEcCCEEEEEEEcCCeEEEEEEEEcCCCc--eEEEECCEE
Confidence 56678888999999999887 9999999999999888754 5565433443 458999999
Q ss_pred EecCCCCh-hhhhhcCCC
Q 005056 230 IGTDGAGS-TVRKLVGID 246 (716)
Q Consensus 230 VgADG~~S-~VR~~lgi~ 246 (716)
|.|+|.+| .+++.+|+.
T Consensus 225 V~AaG~~s~~l~~~~g~~ 242 (561)
T 3da1_A 225 VNAAGPWVDTLREKDRSK 242 (561)
T ss_dssp EECCGGGHHHHHHTTTCC
T ss_pred EECCCcchHHHHHhcCCC
Confidence 99999998 678887764
No 43
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=99.30 E-value=1.2e-11 Score=137.19 Aligned_cols=166 Identities=18% Similarity=0.264 Sum_probs=93.9
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCCCCC------CCeeeeChhHH-HHHHhhh---c-hHHHHHhcC
Q 005056 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTH------PQAHFINNRYA-LVFRKLD---G-LAEEIERSQ 109 (716)
Q Consensus 41 ~~~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~~~~------p~a~~i~~rtm-eilr~l~---G-l~~~l~~~~ 109 (716)
.+++||+|||||++||++|+.|+++|++|+||||.+.+... .+....+.... +++..+. . +...+....
T Consensus 24 ~~~~dVvIIGgG~aGl~aA~~la~~G~~V~llEk~~~~g~~~~~sg~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (447)
T 2i0z_A 24 AMHYDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEIVKHIPGNGRFLYSAFSIFN 103 (447)
T ss_dssp -CCCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTGGGTCCCEECSCHHHHHHTCTBTGGGGHHHHHHSC
T ss_pred cCCCCEEEECCcHHHHHHHHHHHHCCCCEEEEECCCCCCceeEEeCCCceeccCcccHHHHHHHhccChHHHHHHHHhcC
Confidence 44589999999999999999999999999999998754210 01111111001 1111110 0 000000000
Q ss_pred CCccccceeEEeecCCCCceeeccCCCccccccccCCccccccChHHHHHHHHHHHHhcCceeecccccccccccccccc
Q 005056 110 PPVDLWRKFIYCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGR 189 (716)
Q Consensus 110 ~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~l~~~~~~~~ 189 (716)
..+. ..+... .|-.+... .... ..|. .-....+.+.|.+.+++.|+
T Consensus 104 -~~~~---~~~~~~-~G~~~~~~------~~g~-~~p~---~~~~~~l~~~L~~~~~~~GV------------------- 149 (447)
T 2i0z_A 104 -NEDI---ITFFEN-LGVKLKEE------DHGR-MFPV---SNKAQSVVDALLTRLKDLGV------------------- 149 (447)
T ss_dssp -HHHH---HHHHHH-TTCCEEEC------GGGE-EEET---TCCHHHHHHHHHHHHHHTTC-------------------
T ss_pred -HHHH---HHHHHh-cCCceEEe------eCCE-EECC---CCCHHHHHHHHHHHHHHCCC-------------------
Confidence 0000 000000 00000000 0000 0000 11246778888888888887
Q ss_pred eEEeCcEEEEEEecCCe-EEEEEEeccCCceeeEEEEecEEEecCCCCh-----------hhhhhcCCCc
Q 005056 190 EILMGHECVSVSATDQC-INVIASFLKEGKCTERNIQCNILIGTDGAGS-----------TVRKLVGIDL 247 (716)
Q Consensus 190 ~v~~g~~v~~i~~~~~g-v~v~v~~~~~g~~~~~~i~ad~VVgADG~~S-----------~VR~~lgi~~ 247 (716)
+|+++++|+++..++++ +.+++ .+|+ +++||.||.|+|..| .+++++|+..
T Consensus 150 ~i~~~~~V~~i~~~~~~v~~V~~---~~G~----~i~Ad~VVlAtGg~s~~~~g~tG~g~~la~~~G~~~ 212 (447)
T 2i0z_A 150 KIRTNTPVETIEYENGQTKAVIL---QTGE----VLETNHVVIAVGGKSVPQTGSTGDGYAWAEKAGHTI 212 (447)
T ss_dssp EEECSCCEEEEEEETTEEEEEEE---TTCC----EEECSCEEECCCCSSSGGGSCSSHHHHHHHHTTCCE
T ss_pred EEEeCcEEEEEEecCCcEEEEEE---CCCC----EEECCEEEECCCCCcCCCCCCCcHHHHHHHHCCCCc
Confidence 99999999999987776 34433 2452 589999999999999 7788887764
No 44
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=99.28 E-value=4.2e-11 Score=130.54 Aligned_cols=175 Identities=14% Similarity=0.183 Sum_probs=98.4
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCCCCC--C--CeeeeC-----hhHHHH-HHhhhchHHHHHh-cCCC
Q 005056 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTH--P--QAHFIN-----NRYALV-FRKLDGLAEEIER-SQPP 111 (716)
Q Consensus 43 ~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~~~~--p--~a~~i~-----~rtmei-lr~l~Gl~~~l~~-~~~~ 111 (716)
++||+|||||++||++|+.|+++|++|+||||....... . .+..+. ....++ .+.+ .+++++.+ .+.+
T Consensus 4 ~~DVvIIGaG~~Gl~~A~~La~~G~~V~vlE~~~~~~~~gas~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~ 82 (397)
T 2oln_A 4 SYDVVVVGGGPVGLATAWQVAERGHRVLVLERHTFFNENGGTSGAERHWRLQYTQEDLFRLTLETL-PLWRALESRCERR 82 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTTCSSSSCCSSEEEECSCCSSHHHHHHHHHHH-HHHHHHHHHHTCC
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCCCCCCCCCCcCeEEEeccCcchhhhHHHHHH-HHHHHHHHHhCcc
Confidence 489999999999999999999999999999998755311 1 112221 111111 1222 33333322 1211
Q ss_pred ccccceeEEeecCCC----Cceee-------ccCC----Ccccc----c---------cccCCccccccChHHHHHHHHH
Q 005056 112 VDLWRKFIYCTSVTG----PILGS-------VDHM----QPQDF----E---------KVVSPVSVAHFSQYKLNKLLLK 163 (716)
Q Consensus 112 ~~~~~~~~~~~~~~g----~~l~~-------~~~~----~~~~~----~---------~~~~p~~~~~i~q~~Le~~L~~ 163 (716)
............... ..+.. .... ...+. . ....|. ...+....+...|.+
T Consensus 83 ~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~-~g~~~~~~~~~~l~~ 161 (397)
T 2oln_A 83 LIHEIGSLWFGDTDVVTNEGQISGTAAMMDKLSVRYEWLKATDIERRFGFRGLPRDYEGFLQPD-GGTIDVRGTLAALFT 161 (397)
T ss_dssp CEECCCEEEEECSSCCBTTBCHHHHHHHHHHTTCCCEEEEHHHHHHHHCCCSCCTTCEEEEETT-CEEEEHHHHHHHHHH
T ss_pred HHHHCCcEEEcCCCccchhHHHHHHHHHHHHcCCCceecCHHHHHhhCcCccCCCceeEEEcCC-CCEEcHHHHHHHHHH
Confidence 100001111111000 00000 0000 00000 0 000011 123445677888888
Q ss_pred HHHhcCceeecccccccccccccccceEEeCcEEEEEEecCCeEEEEEEeccCCceeeEEEEecEEEecCCCC-hhhhhh
Q 005056 164 QLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSATDQCINVIASFLKEGKCTERNIQCNILIGTDGAG-STVRKL 242 (716)
Q Consensus 164 ~~~~~g~~~~~~~~~~~l~~~~~~~~~v~~g~~v~~i~~~~~gv~v~v~~~~~g~~~~~~i~ad~VVgADG~~-S~VR~~ 242 (716)
.+.+.|+ +|+++++|++++.++++|+++. +++ +|+||+||.|+|++ +.+++.
T Consensus 162 ~a~~~Gv-------------------~i~~~~~V~~i~~~~~~v~v~t---~~g-----~i~a~~VV~A~G~~s~~l~~~ 214 (397)
T 2oln_A 162 LAQAAGA-------------------TLRAGETVTELVPDADGVSVTT---DRG-----TYRAGKVVLACGPYTNDLLEP 214 (397)
T ss_dssp HHHHTTC-------------------EEEESCCEEEEEEETTEEEEEE---SSC-----EEEEEEEEECCGGGHHHHHGG
T ss_pred HHHHcCC-------------------EEECCCEEEEEEEcCCeEEEEE---CCC-----EEEcCEEEEcCCcChHHHhhh
Confidence 8888887 9999999999999888876532 233 58999999999998 557787
Q ss_pred cCCC
Q 005056 243 VGID 246 (716)
Q Consensus 243 lgi~ 246 (716)
+|+.
T Consensus 215 ~g~~ 218 (397)
T 2oln_A 215 LGAR 218 (397)
T ss_dssp GTCC
T ss_pred cCCC
Confidence 7753
No 45
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=99.26 E-value=4.8e-11 Score=139.45 Aligned_cols=70 Identities=10% Similarity=0.181 Sum_probs=55.0
Q ss_pred ccChHHHHHHHHHHHHhcCceeecccccccccccccccceEEeCcEEEEEEecCCeEEEEEEeccCCceeeEEEEecEEE
Q 005056 151 HFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSATDQCINVIASFLKEGKCTERNIQCNILI 230 (716)
Q Consensus 151 ~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~l~~~~~~~~~v~~g~~v~~i~~~~~gv~v~v~~~~~g~~~~~~i~ad~VV 230 (716)
.++...+...|.+.+++.|+ +|+++++|++++.++++|.++.. +|. +++||.||
T Consensus 413 ~v~p~~l~~aL~~~a~~~Gv-------------------~i~~~t~V~~l~~~~~~v~V~t~---~G~----~i~Ad~VV 466 (676)
T 3ps9_A 413 WLCPAELTRNVLELAQQQGL-------------------QIYYQYQLQNFSRKDDCWLLNFA---GDQ----QATHSVVV 466 (676)
T ss_dssp EECHHHHHHHHHHHHHHTTC-------------------EEEESCCEEEEEEETTEEEEEET---TSC----EEEESEEE
T ss_pred eeCHHHHHHHHHHHHHhCCC-------------------EEEeCCeeeEEEEeCCeEEEEEC---CCC----EEECCEEE
Confidence 45567888899999998887 99999999999999888755432 342 58999999
Q ss_pred ecCCCChh-hhhhcCCC
Q 005056 231 GTDGAGST-VRKLVGID 246 (716)
Q Consensus 231 gADG~~S~-VR~~lgi~ 246 (716)
.|+|..|. +.+.++++
T Consensus 467 lAtG~~s~~l~~~~~lp 483 (676)
T 3ps9_A 467 LANGHQISRFSQTSTLP 483 (676)
T ss_dssp ECCGGGGGCSTTTTTCS
T ss_pred ECCCcchhccccccCCc
Confidence 99999986 44444444
No 46
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.25 E-value=4e-11 Score=124.80 Aligned_cols=143 Identities=14% Similarity=0.235 Sum_probs=91.9
Q ss_pred ccCCEEEECCCHHHHHHHHHHHhC-CCCEEEECCCCCCCCC--C-----CeeeeChhHHHHHHhhhchHHHHHhcCCCcc
Q 005056 42 AVVPVLIVGAGPVGLVLSILLTKL-GIKCSVLEKNKAFSTH--P-----QAHFINNRYALVFRKLDGLAEEIERSQPPVD 113 (716)
Q Consensus 42 ~~~dVlIVGaGpaGLt~Al~Lar~-Gi~v~liEr~~~~~~~--p-----~a~~i~~rtmeilr~l~Gl~~~l~~~~~~~~ 113 (716)
.++||+||||||+||++|+.|+++ |++|+||||.+.+... . ....+.....+.|+++ |+ +..
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~~~~~~~~~~~~~~~~~~~~~l~~~-G~---------~~~ 107 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEI-GV---------AYD 107 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTTTCCSTTCCCEEEETTTHHHHHHH-TC---------CCE
T ss_pred cccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCceecCCcchHHHHcCcHHHHHHHHc-CC---------Ccc
Confidence 458999999999999999999998 9999999998765321 1 1122223334444443 32 110
Q ss_pred ccceeEEeecCCCCceeeccCCCccccccccCCccccccChHHHHHHHHHHHHh-cCceeecccccccccccccccceEE
Q 005056 114 LWRKFIYCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEK-LNFKICTSEGTEGLHNHLLQGREIL 192 (716)
Q Consensus 114 ~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~-~g~~~~~~~~~~~l~~~~~~~~~v~ 192 (716)
. .+. + ........+...|.+++.+ .|+ +++
T Consensus 108 ~----------~~~------------~--------~~~~~~~~~~~~l~~~~~~~~gv-------------------~i~ 138 (284)
T 1rp0_A 108 E----------QDT------------Y--------VVVKHAALFTSTIMSKLLARPNV-------------------KLF 138 (284)
T ss_dssp E----------CSS------------E--------EEESCHHHHHHHHHHHHHTSTTE-------------------EEE
T ss_pred c----------CCC------------E--------EEecCHHHHHHHHHHHHHhcCCC-------------------EEE
Confidence 0 000 0 0011345677777777765 465 999
Q ss_pred eCcEEEEEEecCCeEE-EEEEec----c--CC-ceeeEEEEecEEEecCCCChhhhhhc
Q 005056 193 MGHECVSVSATDQCIN-VIASFL----K--EG-KCTERNIQCNILIGTDGAGSTVRKLV 243 (716)
Q Consensus 193 ~g~~v~~i~~~~~gv~-v~v~~~----~--~g-~~~~~~i~ad~VVgADG~~S~VR~~l 243 (716)
++++|+++..+++.+. +.+... + ++ .....+++||+||.|+|.+|.++...
T Consensus 139 ~~~~V~~i~~~~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~AtG~~s~~~~~~ 197 (284)
T 1rp0_A 139 NAVAAEDLIVKGNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGHDGPFGATG 197 (284)
T ss_dssp ETEEEEEEEEETTEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEECCCSSSTTTTHH
T ss_pred cCcEEEEEEecCCeEEEEEEeccccccccCccccCceEEEECCEEEECCCCchHHHHHH
Confidence 9999999998777653 333210 1 11 01235799999999999999887543
No 47
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=99.24 E-value=3.2e-11 Score=136.24 Aligned_cols=168 Identities=16% Similarity=0.241 Sum_probs=92.9
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCCCCCCCeeeeChhHHHHHHhhhchHHHHHh-------cCCCc-
Q 005056 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIER-------SQPPV- 112 (716)
Q Consensus 41 ~~~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~~~~p~a~~i~~rtmeilr~l~Gl~~~l~~-------~~~~~- 112 (716)
..+.||+||||||+||++|+.|+++|++|+||||.+.... +...+ . +++....- .+...
T Consensus 105 ~~~~DVVIVGgGpaGL~aA~~La~~G~kV~VlEr~~~~~~---------R~~~~---~-g~w~~~~~~~~~~i~~g~gGa 171 (549)
T 3nlc_A 105 NLTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRE---------RTKDT---F-GFWRKRTLNPESNVQFGEGGA 171 (549)
T ss_dssp TCCCCCEEECCSHHHHHHHHHHHHTTCCCEEECSSCCHHH---------HHHHH---H-HHHHHCCCCTTSSSSSSTTGG
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCeEEEEEccCcccc---------cccch---h-cccccccccccccceeccCCc
Confidence 4458999999999999999999999999999999865321 11111 1 22111000 00000
Q ss_pred cccceeEEeecCCCCce------eec-cCCCccccccccCCccccccChHHHHHHHHHHHHhcCceeecccccccccccc
Q 005056 113 DLWRKFIYCTSVTGPIL------GSV-DHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHL 185 (716)
Q Consensus 113 ~~~~~~~~~~~~~g~~l------~~~-~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~l~~~~ 185 (716)
..+..-........... ..+ .............|. ........+...|.+.+++.|+
T Consensus 172 g~~sdgkl~~~i~~~~~~~~~v~~~~~~~G~~~~i~~~~~p~-~G~~~~~~l~~~L~~~l~~~Gv--------------- 235 (549)
T 3nlc_A 172 GTFSDGKLYSQVKDPNFYGRKVITEFVEAGAPEEILYVSKPH-IGTFKLVTMIEKMRATIIELGG--------------- 235 (549)
T ss_dssp GTTSCCCCCCCSCCTTCHHHHHHHHHHHTTCCGGGGTBSSCC-CCHHHHHHHHHHHHHHHHHTTC---------------
T ss_pred ccccCCceEEEeccccccHHHHHHHHHHcCCCceEeeccccc-cccchHHHHHHHHHHHHHhcCC---------------
Confidence 00000000000000000 000 000000000000010 0112235677778888888887
Q ss_pred cccceEEeCcEEEEEEecCCeEE-EEEEeccCCceeeEEEEecEEEecCCCChh----hhhhcCCCcc
Q 005056 186 LQGREILMGHECVSVSATDQCIN-VIASFLKEGKCTERNIQCNILIGTDGAGST----VRKLVGIDLV 248 (716)
Q Consensus 186 ~~~~~v~~g~~v~~i~~~~~gv~-v~v~~~~~g~~~~~~i~ad~VVgADG~~S~----VR~~lgi~~~ 248 (716)
+|+++++|++++.+++++. +++ ++|+ +++||+||.|+|.+|. ..+.+|+.+.
T Consensus 236 ----~I~~~t~V~~I~~~~~~v~gV~l---~~G~----~i~Ad~VVlA~G~~s~~~~~~l~~~Gi~~~ 292 (549)
T 3nlc_A 236 ----EIRFSTRVDDLHMEDGQITGVTL---SNGE----EIKSRHVVLAVGHSARDTFEMLHERGVYME 292 (549)
T ss_dssp ----EEESSCCEEEEEESSSBEEEEEE---TTSC----EEECSCEEECCCTTCHHHHHHHHHTTCCCE
T ss_pred ----EEEeCCEEEEEEEeCCEEEEEEE---CCCC----EEECCEEEECCCCChhhHHHHHHHcCCCcc
Confidence 9999999999998877654 433 2453 6899999999999994 4455676643
No 48
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=99.21 E-value=7.7e-11 Score=137.92 Aligned_cols=71 Identities=10% Similarity=0.063 Sum_probs=54.0
Q ss_pred ccChHHHHHHHHHHHHhcCceeecccccccccccccccceEEeCcEEEEEEecCCeEEEEEEeccCCceeeEEEEecEEE
Q 005056 151 HFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSATDQCINVIASFLKEGKCTERNIQCNILI 230 (716)
Q Consensus 151 ~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~l~~~~~~~~~v~~g~~v~~i~~~~~gv~v~v~~~~~g~~~~~~i~ad~VV 230 (716)
.++...+...|.+.+++.|+ +|+++++|++++.+++++.++.. +|. .+++||.||
T Consensus 408 ~v~p~~l~~aL~~~a~~~Gv-------------------~i~~~t~V~~l~~~~~~v~V~t~---~G~---~~i~Ad~VV 462 (689)
T 3pvc_A 408 WLCPSDLTHALMMLAQQNGM-------------------TCHYQHELQRLKRIDSQWQLTFG---QSQ---AAKHHATVI 462 (689)
T ss_dssp EECHHHHHHHHHHHHHHTTC-------------------EEEESCCEEEEEECSSSEEEEEC----CC---CCEEESEEE
T ss_pred EECHHHHHHHHHHHHHhCCC-------------------EEEeCCeEeEEEEeCCeEEEEeC---CCc---EEEECCEEE
Confidence 34567888889999988887 99999999999998888765542 331 158999999
Q ss_pred ecCCCChh-hhhhcCCC
Q 005056 231 GTDGAGST-VRKLVGID 246 (716)
Q Consensus 231 gADG~~S~-VR~~lgi~ 246 (716)
.|+|+.|. +.+.++++
T Consensus 463 lAtG~~s~~l~~~~~lp 479 (689)
T 3pvc_A 463 LATGHRLPEWEQTHHLP 479 (689)
T ss_dssp ECCGGGTTCSTTTTTSC
T ss_pred ECCCcchhccccccCCc
Confidence 99999976 44444443
No 49
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.20 E-value=7.5e-11 Score=128.87 Aligned_cols=142 Identities=19% Similarity=0.244 Sum_probs=86.9
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCCCCC------CCeee----------e--Chh-HHHHHHhh--h
Q 005056 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTH------PQAHF----------I--NNR-YALVFRKL--D 99 (716)
Q Consensus 41 ~~~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~~~~------p~a~~----------i--~~r-tmeilr~l--~ 99 (716)
|.++||+||||||+|+++|+.|+++|.+|+||||.+.+... .++.. + ++. ....+..+ .
T Consensus 2 M~~~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 81 (401)
T 2gqf_A 2 SQYSENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQNPHFVKSALARYTNW 81 (401)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEECSCTTSTHHHHHHSCHH
T ss_pred CCCCCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhccCCHHHHHHHHHhCCHH
Confidence 45699999999999999999999999999999998764210 00000 0 000 00111111 0
Q ss_pred chHHHHHhcCCCccccceeEEeecCCCCceeeccCCCccccccccCCccccccChHHHHHHHHHHHHhcCceeecccccc
Q 005056 100 GLAEEIERSQPPVDLWRKFIYCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTE 179 (716)
Q Consensus 100 Gl~~~l~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~ 179 (716)
.+.+.+...+.+... ...+ . ..|. . ....+...|.+.+++.|+
T Consensus 82 ~~~~~~~~~Gi~~~~--------~~~g---------------~-~~p~---~-~~~~l~~~L~~~~~~~Gv--------- 124 (401)
T 2gqf_A 82 DFISLVAEQGITYHE--------KELG---------------Q-LFCD---E-GAEQIVEMLKSECDKYGA--------- 124 (401)
T ss_dssp HHHHHHHHTTCCEEE--------CSTT---------------E-EEET---T-CTHHHHHHHHHHHHHHTC---------
T ss_pred HHHHHHHhCCCceEE--------CcCC---------------E-EccC---C-CHHHHHHHHHHHHHHCCC---------
Confidence 111112222221100 0000 0 0010 1 456777888888888887
Q ss_pred cccccccccceEEeCcEEEEEEec----CCeEEEEEEeccCCceeeEEEEecEEEecCCCCh
Q 005056 180 GLHNHLLQGREILMGHECVSVSAT----DQCINVIASFLKEGKCTERNIQCNILIGTDGAGS 237 (716)
Q Consensus 180 ~l~~~~~~~~~v~~g~~v~~i~~~----~~gv~v~v~~~~~g~~~~~~i~ad~VVgADG~~S 237 (716)
+|+++++|+++..+ ++++.++. +++ +++||+||.|+|.+|
T Consensus 125 ----------~i~~~~~v~~i~~~~~g~~~~~~v~~---~~g-----~i~ad~VVlAtG~~s 168 (401)
T 2gqf_A 125 ----------KILLRSEVSQVERIQNDEKVRFVLQV---NST-----QWQCKNLIVATGGLS 168 (401)
T ss_dssp ----------EEECSCCEEEEEECCSCSSCCEEEEE---TTE-----EEEESEEEECCCCSS
T ss_pred ----------EEEeCCEEEEEEcccCcCCCeEEEEE---CCC-----EEECCEEEECCCCcc
Confidence 99999999999876 55655443 122 589999999999999
No 50
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=99.20 E-value=1.3e-10 Score=122.88 Aligned_cols=143 Identities=17% Similarity=0.274 Sum_probs=92.5
Q ss_pred ccCCEEEECCCHHHHHHHHHHHhC--CCCEEEECCCCCCC-------CCCCeeeeChhHHHHHHhhhchHHHHHhcCCCc
Q 005056 42 AVVPVLIVGAGPVGLVLSILLTKL--GIKCSVLEKNKAFS-------THPQAHFINNRYALVFRKLDGLAEEIERSQPPV 112 (716)
Q Consensus 42 ~~~dVlIVGaGpaGLt~Al~Lar~--Gi~v~liEr~~~~~-------~~p~a~~i~~rtmeilr~l~Gl~~~l~~~~~~~ 112 (716)
.++||+||||||+||++|+.|+++ |++|+||||.+.+. .......+.+...+.|+++ |+ +.
T Consensus 78 ~~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg~~~~g~~~~~~~~~~~~~~~L~~~-Gv---------~~ 147 (344)
T 3jsk_A 78 AETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGGAWLGGQLFSAMVMRKPADVFLDEV-GV---------PY 147 (344)
T ss_dssp HBCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTTTTCCBTTCCCEEEETTTHHHHHHH-TC---------CC
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCccccCCccchhhhcchHHHHHHHHc-CC---------cc
Confidence 468999999999999999999998 99999999997653 1122233445556666655 43 11
Q ss_pred cccceeEEeecCCCCceeeccCCCccccccccCCccccccChHHHHHHHHHHHHhc-CceeecccccccccccccccceE
Q 005056 113 DLWRKFIYCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKL-NFKICTSEGTEGLHNHLLQGREI 191 (716)
Q Consensus 113 ~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~-g~~~~~~~~~~~l~~~~~~~~~v 191 (716)
.. .|. +. .......+...|.+.+.+. ++ ++
T Consensus 148 ~~----------~G~-~~-------------------~~~~~~d~~~~L~~~a~~~~gV-------------------~i 178 (344)
T 3jsk_A 148 ED----------EGD-YV-------------------VVKHAALFTSTVLSKVLQRPNV-------------------KL 178 (344)
T ss_dssp EE----------CSS-EE-------------------EESCHHHHHHHHHHHHHTCTTE-------------------EE
T ss_pred cc----------cCC-eE-------------------EEecHHHHHHHHHHHHHhCCCC-------------------EE
Confidence 00 010 00 0112345667888888774 55 99
Q ss_pred EeCcEEEEEEecCC-------------------eEE-EEEEec---cCCc----eeeEEEEecEEEecCCCChhhhhhc
Q 005056 192 LMGHECVSVSATDQ-------------------CIN-VIASFL---KEGK----CTERNIQCNILIGTDGAGSTVRKLV 243 (716)
Q Consensus 192 ~~g~~v~~i~~~~~-------------------gv~-v~v~~~---~~g~----~~~~~i~ad~VVgADG~~S~VR~~l 243 (716)
+++++++++..+++ .|. +.+.+. ..+. ....+|+|++||.|+|..|++++.+
T Consensus 179 ~~~~~V~dLi~~~d~~~~~~~~~~g~~~~~g~~rV~GVv~~~~~v~~~g~~~~~~d~~~i~Ak~VV~ATG~~s~v~~~~ 257 (344)
T 3jsk_A 179 FNATTVEDLITRKHHAESSSSSDDGEAEDEAKVRIAGVVTNWTLVSMHHDDQSAMDPNTINAPVIISTTGHDGPFGAFS 257 (344)
T ss_dssp EETEEEEEEEEEEC----------------CCEEEEEEEEEEHHHHTTSSSSSCCBCEEEECSEEEECCCSSSSSSCHH
T ss_pred EeCCEEEEEEecCCcccccccccccccccCCCceEeEEEeeeeeeeccCCcccccCceEEEcCEEEECCCCCchhhHHH
Confidence 99999999987653 221 111110 1121 0235899999999999999976544
No 51
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=99.17 E-value=3.6e-10 Score=124.19 Aligned_cols=34 Identities=35% Similarity=0.514 Sum_probs=32.6
Q ss_pred CEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCC
Q 005056 45 PVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (716)
Q Consensus 45 dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~ 78 (716)
||+|||||++||++|+.|+++|++|+||||++.+
T Consensus 2 dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~ 35 (421)
T 3nrn_A 2 RAVVVGAGLGGLLAGAFLARNGHEIIVLEKSAMI 35 (421)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred cEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCC
Confidence 8999999999999999999999999999998765
No 52
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=99.17 E-value=2e-10 Score=127.74 Aligned_cols=62 Identities=19% Similarity=0.269 Sum_probs=47.8
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCC------CCEEEECCCCCCCCCCC------------e---eeeChhHHHHHHhhhch
Q 005056 43 VVPVLIVGAGPVGLVLSILLTKLG------IKCSVLEKNKAFSTHPQ------------A---HFINNRYALVFRKLDGL 101 (716)
Q Consensus 43 ~~dVlIVGaGpaGLt~Al~Lar~G------i~v~liEr~~~~~~~p~------------a---~~i~~rtmeilr~l~Gl 101 (716)
..||+|||||++||++|+.|+++| ++|+|+|+++.+....+ + ....+..+++++++ |+
T Consensus 5 ~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~GG~~~s~~~~g~~~d~G~~~~~~~~~~~~~l~~~l-gl 83 (470)
T 3i6d_A 5 KKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRVGGKIQTVKKDGYIIERGPDSFLERKKSAPQLVKDL-GL 83 (470)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSSCTTCCEECCTTCCEESSCCCEETTCTHHHHHHHHT-TC
T ss_pred CCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCCCceEEEeccCCEEeccChhhhhhCCHHHHHHHHHc-CC
Confidence 479999999999999999999999 99999999865532111 1 12256788888888 87
Q ss_pred HHHH
Q 005056 102 AEEI 105 (716)
Q Consensus 102 ~~~l 105 (716)
.+.+
T Consensus 84 ~~~~ 87 (470)
T 3i6d_A 84 EHLL 87 (470)
T ss_dssp CTTE
T ss_pred ccee
Confidence 6544
No 53
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=99.13 E-value=8.3e-11 Score=128.77 Aligned_cols=174 Identities=13% Similarity=0.168 Sum_probs=93.3
Q ss_pred ccCCEEEECCCHHHHHHHHHHHhC--CCCEEEECCCCCCCCCCC--ee-ee-ChhH-----HHH-HHhhhchHHHHHhcC
Q 005056 42 AVVPVLIVGAGPVGLVLSILLTKL--GIKCSVLEKNKAFSTHPQ--AH-FI-NNRY-----ALV-FRKLDGLAEEIERSQ 109 (716)
Q Consensus 42 ~~~dVlIVGaGpaGLt~Al~Lar~--Gi~v~liEr~~~~~~~p~--a~-~i-~~rt-----mei-lr~l~Gl~~~l~~~~ 109 (716)
.++||+|||||++|+++|+.|+++ |++|+||||......... +. .+ .+.. .++ .+.+ .++++ ..+
T Consensus 35 ~~~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~~~~~~~s~~~~g~~i~~~~~~~~~~~~l~~~~~-~~~~~--~~~ 111 (405)
T 3c4n_A 35 EAFDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGGLPNEEGATILAPGVWTAQDIPAGQEAQAEWTR-EQLLG--ALG 111 (405)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSCSSCTTSHHHHCCCEECGGGCCTTCHHHHHHHH-HHHHT--GGG
T ss_pred CcCCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCCCCCcchhccCCcceeecccCCchHHHHHHHHH-HHHHH--HhC
Confidence 458999999999999999999999 999999999864432211 11 22 2111 111 1111 22222 111
Q ss_pred C--Cccccc-eeE-EeecC--CCCceeeccCCCc----------cc-cccccCCccccccChHHHHHHHHHHHHhcCcee
Q 005056 110 P--PVDLWR-KFI-YCTSV--TGPILGSVDHMQP----------QD-FEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKI 172 (716)
Q Consensus 110 ~--~~~~~~-~~~-~~~~~--~g~~l~~~~~~~~----------~~-~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~ 172 (716)
. ...... ... ..... .| .+...+.... .. ......| ....++...+...|.+.+.+.|+
T Consensus 112 ~~~~~~~~~~g~l~~~~~~~~~g-~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~-~~g~v~~~~l~~~L~~~~~~~Gv-- 187 (405)
T 3c4n_A 112 SGKTLEVEDRPLLHLLPAGEGSG-LTPTLDALADFPEALALLDPARLPVARVDP-RALTYRPGSLALLAAQQAIGQGA-- 187 (405)
T ss_dssp SSCCCCEEECCEEEEESSCCSSS-CEEHHHHTTTCHHHHTTSCTTTSCEEEEET-TCEEECHHHHHHHHHHHHHTTTC--
T ss_pred CCCCCcEEeeCeEEehhhHhHCC-CCCHHHHHHhCCCccccccCCcceEEEEcC-CCEEEcHHHHHHHHHHHHHHCCC--
Confidence 1 000000 000 00000 01 0000000000 00 0000111 12345667889999999998887
Q ss_pred ecccccccccccccccceEEeCcEEE---------EEEecCCeEEEEEEeccCCceeeEEEEecEEEecCCCCh-hhhh-
Q 005056 173 CTSEGTEGLHNHLLQGREILMGHECV---------SVSATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGS-TVRK- 241 (716)
Q Consensus 173 ~~~~~~~~l~~~~~~~~~v~~g~~v~---------~i~~~~~gv~v~v~~~~~g~~~~~~i~ad~VVgADG~~S-~VR~- 241 (716)
+++++++|+ +++.+++++.++. ++| +++||+||.|+|++| .+++
T Consensus 188 -----------------~i~~~~~v~~~~g~~~~~~i~~~~~~v~v~~---~~g-----~i~a~~VV~A~G~~s~~l~~~ 242 (405)
T 3c4n_A 188 -----------------GLLLNTRAELVPGGVRLHRLTVTNTHQIVVH---ETR-----QIRAGVIIVAAGAAGPALVEQ 242 (405)
T ss_dssp -----------------EEECSCEEEEETTEEEEECBCC-------CB---CCE-----EEEEEEEEECCGGGHHHHHHH
T ss_pred -----------------EEEcCCEEEeccccccccceEeeCCeEEEEE---CCc-----EEECCEEEECCCccHHHHHHH
Confidence 899999999 8887776653321 122 689999999999999 6887
Q ss_pred hcCCCc
Q 005056 242 LVGIDL 247 (716)
Q Consensus 242 ~lgi~~ 247 (716)
.+|+..
T Consensus 243 ~~g~~~ 248 (405)
T 3c4n_A 243 GLGLHT 248 (405)
T ss_dssp HHCCCC
T ss_pred hcCCCC
Confidence 887654
No 54
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=99.13 E-value=3.4e-10 Score=129.42 Aligned_cols=162 Identities=16% Similarity=0.164 Sum_probs=97.7
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCCCCCC--CeeeeChhHHHHHHhhhchH----------------
Q 005056 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHP--QAHFINNRYALVFRKLDGLA---------------- 102 (716)
Q Consensus 41 ~~~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~~~~p--~a~~i~~rtmeilr~l~Gl~---------------- 102 (716)
..++||||||||++||++|+.|+++|.+|+||||.+.+.... .+..++....+..+.+ |+.
T Consensus 119 ~~~~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~s~gg~~~~~~~~~~~~-g~~ds~~~~~~~~~~~~~~ 197 (566)
T 1qo8_A 119 SETTQVLVVGAGSAGFNASLAAKKAGANVILVDKAPFSGGNSMISAGGMNAVGTKQQTAH-GVEDKVEWFIEDAMKGGRQ 197 (566)
T ss_dssp SEEEEEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHT-TCCCCHHHHHHHHHHHTTT
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCcccccCceeEccCCHHHHHh-CCCCCHHHHHHHHHHhcCC
Confidence 456899999999999999999999999999999998663221 1111211111122222 211
Q ss_pred ------------------HHHHhcCCCccccceeEEeecCCCCceeeccCCCccccccccCCccccccChHHHHHHHHHH
Q 005056 103 ------------------EEIERSQPPVDLWRKFIYCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQ 164 (716)
Q Consensus 103 ------------------~~l~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~ 164 (716)
+.+.+.+.+... .....|.. +.....|. ...+....+...|.+.
T Consensus 198 ~~~~~~~~~~~~~~~~~i~~l~~~Gv~~~~------~~~~~g~~-----------~~r~~~~~-~~~~~~~~l~~~L~~~ 259 (566)
T 1qo8_A 198 QNDIKLVTILAEQSADGVQWLESLGANLDD------LKRSGGAR-----------VDRTHRPH-GGKSSGPEIIDTLRKA 259 (566)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHHTTCCCCE------EECCTTCS-----------SCCEEECS-SSSCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHhccHHHHHHHHhcCCcccc------ccccCCCC-----------CCceeecC-CCCCCHHHHHHHHHHH
Confidence 111112211100 00000000 00000010 0123467788999999
Q ss_pred HHhcCceeecccccccccccccccceEEeCcEEEEEEecC-CeEE-EEEEeccCCceeeEEEEecEEEecCCCChhhhhh
Q 005056 165 LEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSATD-QCIN-VIASFLKEGKCTERNIQCNILIGTDGAGSTVRKL 242 (716)
Q Consensus 165 ~~~~g~~~~~~~~~~~l~~~~~~~~~v~~g~~v~~i~~~~-~gv~-v~v~~~~~g~~~~~~i~ad~VVgADG~~S~VR~~ 242 (716)
+.+.|+ +|+++++|+++..++ +.|+ +++.. .+|+ ..+|+||.||.|+|..|.+|+.
T Consensus 260 ~~~~gv-------------------~i~~~~~v~~l~~~~~g~v~Gv~~~~-~~g~--~~~i~A~~VVlAtGg~s~~~~~ 317 (566)
T 1qo8_A 260 AKEQGI-------------------DTRLNSRVVKLVVNDDHSVVGAVVHG-KHTG--YYMIGAKSVVLATGGYGMNKEM 317 (566)
T ss_dssp HHHTTC-------------------CEECSEEEEEEEECTTSBEEEEEEEE-TTTE--EEEEEEEEEEECCCCCTTCHHH
T ss_pred HHhcCC-------------------EEEeCCEEEEEEECCCCcEEEEEEEe-CCCc--EEEEEcCEEEEecCCcccCHHH
Confidence 998887 999999999999877 6554 44442 2442 3579999999999999987665
Q ss_pred c
Q 005056 243 V 243 (716)
Q Consensus 243 l 243 (716)
+
T Consensus 318 ~ 318 (566)
T 1qo8_A 318 I 318 (566)
T ss_dssp H
T ss_pred H
Confidence 4
No 55
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.12 E-value=4.5e-10 Score=119.83 Aligned_cols=35 Identities=34% Similarity=0.415 Sum_probs=32.7
Q ss_pred CCEEEECCCHHHHHHHHHHHh---CCCCEEEECCCCCC
Q 005056 44 VPVLIVGAGPVGLVLSILLTK---LGIKCSVLEKNKAF 78 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar---~Gi~v~liEr~~~~ 78 (716)
.||+|||||++||++|+.|++ +|++|+||||.+.+
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~~~ 39 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKADDS 39 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSSSS
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCCCC
Confidence 489999999999999999999 99999999998654
No 56
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.12 E-value=2e-10 Score=115.74 Aligned_cols=134 Identities=18% Similarity=0.170 Sum_probs=88.3
Q ss_pred ccCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCCCCCCCeeeeChhHHHHHHhhhchHHHHHhcCCCccccceeEEe
Q 005056 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYC 121 (716)
Q Consensus 42 ~~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~~~~p~a~~i~~rtmeilr~l~Gl~~~l~~~~~~~~~~~~~~~~ 121 (716)
+++||+||||||+|+.+|+.|+++|++|+||||...... ..+++. +.++ .
T Consensus 2 ~~~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~~~~G----~~~~~~-------~~~~---------~---------- 51 (232)
T 2cul_A 2 AAYQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSLDAVM----MPFLPP-------KPPF---------P---------- 51 (232)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTT----CCSSCC-------CSCC---------C----------
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCcCC----cccCcc-------cccc---------c----------
Confidence 458999999999999999999999999999999842110 000100 0000 0
Q ss_pred ecCCCCceeeccCCCccccccccCCccccccChHHHHHHHHHHHHhc-CceeecccccccccccccccceEEeCcEEEEE
Q 005056 122 TSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKL-NFKICTSEGTEGLHNHLLQGREILMGHECVSV 200 (716)
Q Consensus 122 ~~~~g~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~-g~~~~~~~~~~~l~~~~~~~~~v~~g~~v~~i 200 (716)
.+..+..++ + . ..| ++..+...|.+.+++. |+ +++ +++|+++
T Consensus 52 ---~~~~~~~~~-----d--~-~g~------~~~~~~~~l~~~~~~~~gv-------------------~i~-~~~v~~i 94 (232)
T 2cul_A 52 ---PGSLLERAY-----D--P-KDE------RVWAFHARAKYLLEGLRPL-------------------HLF-QATATGL 94 (232)
T ss_dssp ---TTCHHHHHC-----C--T-TCC------CHHHHHHHHHHHHHTCTTE-------------------EEE-ECCEEEE
T ss_pred ---hhhHHhhhc-----c--C-CCC------CHHHHHHHHHHHHHcCCCc-------------------EEE-EeEEEEE
Confidence 000000000 0 0 011 5778889999999886 65 777 5799999
Q ss_pred EecCCeEEEEEEeccCCceeeEEEEecEEEecCCCChhhhhhcCCCcc
Q 005056 201 SATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGSTVRKLVGIDLV 248 (716)
Q Consensus 201 ~~~~~gv~v~v~~~~~g~~~~~~i~ad~VVgADG~~S~VR~~lgi~~~ 248 (716)
..+++.+.. +.. .+|+ +++||+||.|+|.+|..+..+|....
T Consensus 95 ~~~~~~v~~-v~~-~~g~----~i~a~~VV~A~G~~s~~~~~~G~~~~ 136 (232)
T 2cul_A 95 LLEGNRVVG-VRT-WEGP----PARGEKVVLAVGSFLGARLFLGGVVE 136 (232)
T ss_dssp EEETTEEEE-EEE-TTSC----CEECSEEEECCTTCSSCEEEETTEEE
T ss_pred EEeCCEEEE-EEE-CCCC----EEECCEEEECCCCChhhceecCCccC
Confidence 988777532 221 2453 68999999999999998887776543
No 57
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=99.11 E-value=7.2e-10 Score=119.38 Aligned_cols=167 Identities=14% Similarity=0.222 Sum_probs=92.6
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCCCC----CCCeeeeC------hhHHHHH-HhhhchHHHHHhcCCC
Q 005056 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFST----HPQAHFIN------NRYALVF-RKLDGLAEEIERSQPP 111 (716)
Q Consensus 43 ~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~~~----~p~a~~i~------~rtmeil-r~l~Gl~~~l~~~~~~ 111 (716)
++||+|||||++|+++|+.|+++|++|+||||...... +..+..+. ....++. +.+ .+++++...+..
T Consensus 2 ~~dvvIIG~Gi~Gl~~A~~La~~G~~V~vle~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~l~~~~~~ 80 (372)
T 2uzz_A 2 KYDLIIIGSGSVGAAAGYYATRAGLNVLMTDAHMPPHQHGSHHGDTRLIRHAYGEGEKYVPLVLRAQ-MLWDELSRHNED 80 (372)
T ss_dssp CEEEEESCTTHHHHHHHHHHHHTTCCEEEECSSCSSSSSSSCCSSEEEECSSCTTCGGGHHHHHHHH-HHHHHHHTTCSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCCccceeeeccCCCchHHHHHHHHH-HHHHHHHHhCCC
Confidence 47999999999999999999999999999999875421 11121222 1111111 112 333444322210
Q ss_pred ccccc--eeEEeecCC--------------CCceeeccC-------CC---ccccccccCCccccccChHHHHHHHHHHH
Q 005056 112 VDLWR--KFIYCTSVT--------------GPILGSVDH-------MQ---PQDFEKVVSPVSVAHFSQYKLNKLLLKQL 165 (716)
Q Consensus 112 ~~~~~--~~~~~~~~~--------------g~~l~~~~~-------~~---~~~~~~~~~p~~~~~i~q~~Le~~L~~~~ 165 (716)
...+. ......... |.....++. +. .........|. ...++...+...|.+.+
T Consensus 81 ~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~-~g~~~~~~l~~~l~~~~ 159 (372)
T 2uzz_A 81 DPIFVRSGVINLGPADSTFLANVAHSAEQWQLNVEKLDAQGIMARWPEIRVPDNYIGLFETD-SGFLRSELAIKTWIQLA 159 (372)
T ss_dssp SCSEECCCEEEEEETTCHHHHHHHHHHHHTTCCEEEEEHHHHHHHCTTCCCCTTEEEEEESS-CEEEEHHHHHHHHHHHH
T ss_pred ccceeeeceEEEeCCCcHHHHHHHHHHHHcCCCcEecCHHHHHhhCCCccCCCCceEEEeCC-CcEEcHHHHHHHHHHHH
Confidence 01100 001000000 000000000 00 00000000111 12344557888888888
Q ss_pred HhcCceeecccccccccccccccceEEeCcEEEEEEecCCeEEEEEEeccCCceeeEEEEecEEEecCCCChh
Q 005056 166 EKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGST 238 (716)
Q Consensus 166 ~~~g~~~~~~~~~~~l~~~~~~~~~v~~g~~v~~i~~~~~gv~v~v~~~~~g~~~~~~i~ad~VVgADG~~S~ 238 (716)
.+.|+ +++++++|++++.+++++.++. ++| +++||.||.|+|++|.
T Consensus 160 ~~~G~-------------------~i~~~~~V~~i~~~~~~~~v~~---~~g-----~~~a~~vV~a~G~~s~ 205 (372)
T 2uzz_A 160 KEAGC-------------------AQLFNCPVTAIRHDDDGVTIET---ADG-----EYQAKKAIVCAGTWVK 205 (372)
T ss_dssp HHTTC-------------------EEECSCCEEEEEECSSSEEEEE---SSC-----EEEEEEEEECCGGGGG
T ss_pred HHCCC-------------------EEEcCCEEEEEEEcCCEEEEEE---CCC-----eEEcCEEEEcCCccHH
Confidence 88887 8999999999998877765543 234 4899999999999874
No 58
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=99.09 E-value=8.1e-10 Score=126.42 Aligned_cols=160 Identities=15% Similarity=0.172 Sum_probs=94.5
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCCCCCC--CeeeeChhHHHHHHhhhchH----------------
Q 005056 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHP--QAHFINNRYALVFRKLDGLA---------------- 102 (716)
Q Consensus 41 ~~~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~~~~p--~a~~i~~rtmeilr~l~Gl~---------------- 102 (716)
..++||||||||++||++|+.|+++|.+|+||||.+...... .+..++.......+++ |+.
T Consensus 124 ~~~~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~a~gg~~~~~~~~~~~~-g~~ds~~~~~~~~~~~g~~ 202 (571)
T 1y0p_A 124 HDTVDVVVVGSGGAGFSAAISATDSGAKVILIEKEPVIGGNAKLAAGGMNAAWTDQQKAK-KITDSPELMFEDTMKGGQN 202 (571)
T ss_dssp SEECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHT-TCCCCHHHHHHHHHHHTTT
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCchhhcCceEEeCCCHHHHHh-CCCCCHHHHHHHHHHhcCC
Confidence 446899999999999999999999999999999998653221 0111111111112222 211
Q ss_pred ------------------HHHHhcCCCccccceeEEeecCCCCceeeccCCCccccccccCCccccccChHHHHHHHHHH
Q 005056 103 ------------------EEIERSQPPVDLWRKFIYCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQ 164 (716)
Q Consensus 103 ------------------~~l~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~ 164 (716)
+.+.+.+.+... .....|.. +.....+.. .......+...|.+.
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~------~~~~~g~~-----------~~r~~~~~~-g~~~g~~l~~~L~~~ 264 (571)
T 1y0p_A 203 INDPALVKVLSSHSKDSVDWMTAMGADLTD------VGMMGGAS-----------VNRAHRPTG-GAGVGAHVVQVLYDN 264 (571)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHHTTCCCCE------EECCTTCS-----------SCCEEESTT-TCCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHccHHHHHHHHhcCCCCcc------CcccCCcC-----------CCeeEecCC-CCCCHHHHHHHHHHH
Confidence 111111111100 00000000 000000100 013346788889999
Q ss_pred HHhcCceeecccccccccccccccceEEeCcEEEEEEecC-CeEE-EEEEeccCCceeeEEEEecEEEecCCCChhhhh
Q 005056 165 LEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSATD-QCIN-VIASFLKEGKCTERNIQCNILIGTDGAGSTVRK 241 (716)
Q Consensus 165 ~~~~g~~~~~~~~~~~l~~~~~~~~~v~~g~~v~~i~~~~-~gv~-v~v~~~~~g~~~~~~i~ad~VVgADG~~S~VR~ 241 (716)
+.+.|+ +|+++++|+++..++ +.|+ +++.. .+|+ ..+|++|.||.|+|..|..++
T Consensus 265 ~~~~gv-------------------~i~~~~~v~~l~~~~~g~v~Gv~~~~-~~g~--~~~i~a~~VVlAtGg~~~n~~ 321 (571)
T 1y0p_A 265 AVKRNI-------------------DLRMNTRGIEVLKDDKGTVKGILVKG-MYKG--YYWVKADAVILATGGFAKNNE 321 (571)
T ss_dssp HHHTTC-------------------EEESSEEEEEEEECTTSCEEEEEEEE-TTTE--EEEEECSEEEECCCCCTTCHH
T ss_pred HHhcCC-------------------EEEeCCEeeEeEEcCCCeEEEEEEEe-CCCc--EEEEECCeEEEeCCCcccCHH
Confidence 988887 999999999999876 5554 44442 1343 457999999999999987554
No 59
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=99.07 E-value=2.6e-09 Score=117.31 Aligned_cols=35 Identities=29% Similarity=0.437 Sum_probs=33.0
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCC
Q 005056 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~ 78 (716)
+||+|||||++||++|+.|+++|.+|+||||++.+
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~ 35 (425)
T 3ka7_A 1 MKTVVIGAGLGGLLSAARLSKAGHEVEVFERLPIT 35 (425)
T ss_dssp CEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCceEEEeCCCCC
Confidence 38999999999999999999999999999999765
No 60
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=99.06 E-value=8.5e-10 Score=117.60 Aligned_cols=131 Identities=15% Similarity=0.204 Sum_probs=86.5
Q ss_pred ccCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCCCCCCCeeeeChhHHHHHHhhhchHHHHHhcCCCccccceeEEe
Q 005056 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYC 121 (716)
Q Consensus 42 ~~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~~~~p~a~~i~~rtmeilr~l~Gl~~~l~~~~~~~~~~~~~~~~ 121 (716)
.++||+||||||+||++|+.|+++|++|+||||.+.+... ..+ .++++ ....+
T Consensus 2 ~~~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~gg~----~~~--------~~~~~-----~~~~~---------- 54 (357)
T 4a9w_A 2 DSVDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPGGA----WQH--------AWHSL-----HLFSP---------- 54 (357)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSSGG----GGG--------SCTTC-----BCSSC----------
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCc----ccC--------CCCCc-----EecCc----------
Confidence 4589999999999999999999999999999998754210 000 00000 00000
Q ss_pred ecCCCCceeeccCCCccccccccCCccccccChHHHHHHHHHHHHhcCceeecccccccccccccccceEEeCcEEEEEE
Q 005056 122 TSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVS 201 (716)
Q Consensus 122 ~~~~g~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~l~~~~~~~~~v~~g~~v~~i~ 201 (716)
.....+. .+. .........++..+...|.+.+++.++ +++++++|++++
T Consensus 55 -----~~~~~~~-----~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~-------------------~~~~~~~v~~i~ 103 (357)
T 4a9w_A 55 -----AGWSSIP-----GWP--MPASQGPYPARAEVLAYLAQYEQKYAL-------------------PVLRPIRVQRVS 103 (357)
T ss_dssp -----GGGSCCS-----SSC--CCCCSSSSCBHHHHHHHHHHHHHHTTC-------------------CEECSCCEEEEE
T ss_pred -----hhhhhCC-----CCC--CCCCccCCCCHHHHHHHHHHHHHHcCC-------------------EEEcCCEEEEEE
Confidence 0000000 000 001112234577888889998888887 899999999999
Q ss_pred ecCCeEE-EEEEeccCCceeeEEEEecEEEecCCCChh
Q 005056 202 ATDQCIN-VIASFLKEGKCTERNIQCNILIGTDGAGST 238 (716)
Q Consensus 202 ~~~~gv~-v~v~~~~~g~~~~~~i~ad~VVgADG~~S~ 238 (716)
.+++.++ ++. +++ ++++|+||.|+|.+|.
T Consensus 104 ~~~~~~~~v~~---~~g-----~~~~d~vV~AtG~~~~ 133 (357)
T 4a9w_A 104 HFGERLRVVAR---DGR-----QWLARAVISATGTWGE 133 (357)
T ss_dssp EETTEEEEEET---TSC-----EEEEEEEEECCCSGGG
T ss_pred ECCCcEEEEEe---CCC-----EEEeCEEEECCCCCCC
Confidence 9888765 442 233 6899999999999874
No 61
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=99.04 E-value=5.7e-10 Score=118.35 Aligned_cols=126 Identities=23% Similarity=0.327 Sum_probs=86.4
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCCCCCCCeeeeChhHHHHHHhhhchHHHHHhcCCCccccceeEE
Q 005056 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIY 120 (716)
Q Consensus 41 ~~~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~~~~p~a~~i~~rtmeilr~l~Gl~~~l~~~~~~~~~~~~~~~ 120 (716)
+.++||+||||||+|+++|+.|+++|++|+|||+++... |.... . .+... .+
T Consensus 3 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~g--------------------g~~~~---~-~~~~~----~~ 54 (335)
T 2zbw_A 3 ADHTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEPG--------------------GQLTA---L-YPEKY----IY 54 (335)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSC--------------------HHHHH---T-CTTSE----EC
T ss_pred CCcCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCC--------------------Ceeec---c-CCCce----ee
Confidence 456899999999999999999999999999999987532 11100 0 11100 00
Q ss_pred eecCCCCceeeccCCCccccccccCCccccccChHHHHHHHHHHHHhcCceeecccccccccccccccceEEeCcEEEEE
Q 005056 121 CTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSV 200 (716)
Q Consensus 121 ~~~~~g~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~l~~~~~~~~~v~~g~~v~~i 200 (716)
... . ...+....+...|.+.+.+.++ +++++++|+++
T Consensus 55 ----------~~~-----~---------~~~~~~~~~~~~l~~~~~~~~~-------------------~~~~~~~v~~i 91 (335)
T 2zbw_A 55 ----------DVA-----G---------FPKVYAKDLVKGLVEQVAPFNP-------------------VYSLGERAETL 91 (335)
T ss_dssp ----------CST-----T---------CSSEEHHHHHHHHHHHHGGGCC-------------------EEEESCCEEEE
T ss_pred ----------ccC-----C---------CCCCCHHHHHHHHHHHHHHcCC-------------------EEEeCCEEEEE
Confidence 000 0 0013355667777777777766 88999999999
Q ss_pred EecCCeEEEEEEeccCCceeeEEEEecEEEecCCCChhhhhhcC
Q 005056 201 SATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGSTVRKLVG 244 (716)
Q Consensus 201 ~~~~~gv~v~v~~~~~g~~~~~~i~ad~VVgADG~~S~VR~~lg 244 (716)
+.+++.+++++. ++. ++++|+||.|+|.+|...+.++
T Consensus 92 ~~~~~~~~v~~~---~g~----~~~~~~lv~AtG~~~~~p~~~~ 128 (335)
T 2zbw_A 92 EREGDLFKVTTS---QGN----AYTAKAVIIAAGVGAFEPRRIG 128 (335)
T ss_dssp EEETTEEEEEET---TSC----EEEEEEEEECCTTSEEEECCCC
T ss_pred EECCCEEEEEEC---CCC----EEEeCEEEECCCCCCCCCCCCC
Confidence 988776655432 442 6899999999999886655544
No 62
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=99.04 E-value=1.4e-09 Score=123.30 Aligned_cols=39 Identities=33% Similarity=0.451 Sum_probs=35.4
Q ss_pred CCCccCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCC
Q 005056 39 SNEAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (716)
Q Consensus 39 ~~~~~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~ 78 (716)
|...++||||||||++||++|+.|++ |.+|+||||.+..
T Consensus 4 m~~~~~DVvVVG~G~AGl~aAl~la~-G~~V~vlEk~~~~ 42 (540)
T 1chu_A 4 LPEHSCDVLIIGSGAAGLSLALRLAD-QHQVIVLSKGPVT 42 (540)
T ss_dssp CCSEECSEEEECCSHHHHHHHHHHTT-TSCEEEECSSCTT
T ss_pred CCCCCCCEEEECccHHHHHHHHHHhc-CCcEEEEECCCCC
Confidence 44567999999999999999999999 9999999999764
No 63
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=99.03 E-value=8.2e-10 Score=118.59 Aligned_cols=126 Identities=17% Similarity=0.322 Sum_probs=86.5
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCCCCCCCeeeeChhHHHHHHhhhchHHHHHhcCCCccccceeEE
Q 005056 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIY 120 (716)
Q Consensus 41 ~~~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~~~~p~a~~i~~rtmeilr~l~Gl~~~l~~~~~~~~~~~~~~~ 120 (716)
+..+||+||||||+||++|+.|+++|++|+|||+.+.+. |....+ .+.. ..+
T Consensus 12 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~g--------------------g~~~~~----~~~~----~~~ 63 (360)
T 3ab1_A 12 HDMRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLG--------------------GQLAAL----YPEK----HIY 63 (360)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC--------------------HHHHHT----CTTS----EEC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCC--------------------Cccccc----CCCc----ccc
Confidence 345899999999999999999999999999999986532 111100 1110 000
Q ss_pred eecCCCCceeeccCCCccccccccCCccccccChHHHHHHHHHHHHhcCceeecccccccccccccccceEEeCcEEEEE
Q 005056 121 CTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSV 200 (716)
Q Consensus 121 ~~~~~g~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~l~~~~~~~~~v~~g~~v~~i 200 (716)
+.. . ...+.+..+...|.+.+.+.++ +++++++|+++
T Consensus 64 ------------~~~---~---------~~~~~~~~~~~~l~~~~~~~~~-------------------~~~~~~~v~~i 100 (360)
T 3ab1_A 64 ------------DVA---G---------FPEVPAIDLVESLWAQAERYNP-------------------DVVLNETVTKY 100 (360)
T ss_dssp ------------CST---T---------CSSEEHHHHHHHHHHHHHTTCC-------------------EEECSCCEEEE
T ss_pred ------------cCC---C---------CCCCCHHHHHHHHHHHHHHhCC-------------------EEEcCCEEEEE
Confidence 000 0 0123456677778888887776 88999999999
Q ss_pred EecCC-eEEEEEEeccCCceeeEEEEecEEEecCCCChhhhhhcC
Q 005056 201 SATDQ-CINVIASFLKEGKCTERNIQCNILIGTDGAGSTVRKLVG 244 (716)
Q Consensus 201 ~~~~~-gv~v~v~~~~~g~~~~~~i~ad~VVgADG~~S~VR~~lg 244 (716)
+.+++ .+++++. +|+ ++++|+||.|+|.+|..++.++
T Consensus 101 ~~~~~~~~~v~~~---~g~----~~~~~~li~AtG~~~~~~~~~~ 138 (360)
T 3ab1_A 101 TKLDDGTFETRTN---TGN----VYRSRAVLIAAGLGAFEPRKLP 138 (360)
T ss_dssp EECTTSCEEEEET---TSC----EEEEEEEEECCTTCSCCBCCCG
T ss_pred EECCCceEEEEEC---CCc----EEEeeEEEEccCCCcCCCCCCC
Confidence 98765 5555542 443 6899999999999886665543
No 64
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=99.02 E-value=6.5e-10 Score=117.76 Aligned_cols=124 Identities=19% Similarity=0.250 Sum_probs=85.0
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCCCCCCCeeeeChhHHHHHHhhhchHHHHHhcCCCccccceeEE
Q 005056 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIY 120 (716)
Q Consensus 41 ~~~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~~~~p~a~~i~~rtmeilr~l~Gl~~~l~~~~~~~~~~~~~~~ 120 (716)
.+.+||+||||||+||++|+.|+++|++|+||||.+.....+. |.+. ...
T Consensus 20 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~~~~~~g----------------g~~~----~~~---------- 69 (338)
T 3itj_A 20 HVHNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAG----------------GQLT----TTT---------- 69 (338)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTT----------------CGGG----GSS----------
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCCCCCcC----------------cccc----cch----------
Confidence 4568999999999999999999999999999999773322222 1100 000
Q ss_pred eecCCCCceeeccCCCccccccccCCccccccChHHHHHHHHHHHHhcCceeecccccccccccccccceEEeCcEEEEE
Q 005056 121 CTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSV 200 (716)
Q Consensus 121 ~~~~~g~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~l~~~~~~~~~v~~g~~v~~i 200 (716)
.+.. + |.....+....+...|.+.+.+.++ ++++++ ++++
T Consensus 70 -------~~~~--------~-----~~~~~~~~~~~~~~~~~~~~~~~gv-------------------~i~~~~-v~~i 109 (338)
T 3itj_A 70 -------EIEN--------F-----PGFPDGLTGSELMDRMREQSTKFGT-------------------EIITET-VSKV 109 (338)
T ss_dssp -------EECC--------S-----TTCTTCEEHHHHHHHHHHHHHHTTC-------------------EEECSC-EEEE
T ss_pred -------hhcc--------c-----CCCcccCCHHHHHHHHHHHHHHcCC-------------------EEEEeE-EEEE
Confidence 0000 0 0001124466788888888888887 899998 9999
Q ss_pred EecCCeEEEEEEeccCCceeeEEEEecEEEecCCCChh
Q 005056 201 SATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGST 238 (716)
Q Consensus 201 ~~~~~gv~v~v~~~~~g~~~~~~i~ad~VVgADG~~S~ 238 (716)
+.+++.++++.....++ .++.+|+||.|.|.++.
T Consensus 110 ~~~~~~~~v~~~~~~~~----~~~~~d~vvlAtG~~~~ 143 (338)
T 3itj_A 110 DLSSKPFKLWTEFNEDA----EPVTTDAIILATGASAK 143 (338)
T ss_dssp ECSSSSEEEEETTCSSS----CCEEEEEEEECCCEEEC
T ss_pred EEcCCEEEEEEEecCCC----cEEEeCEEEECcCCCcC
Confidence 98888877665321233 36899999999998653
No 65
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=99.01 E-value=1.3e-09 Score=120.76 Aligned_cols=167 Identities=14% Similarity=0.092 Sum_probs=90.7
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCC--CEEEECCCCCCCCCCCeeeeChhHHHHHHhhhchHHHHHhc-CCCc-----
Q 005056 41 EAVVPVLIVGAGPVGLVLSILLTKLGI--KCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERS-QPPV----- 112 (716)
Q Consensus 41 ~~~~dVlIVGaGpaGLt~Al~Lar~Gi--~v~liEr~~~~~~~p~a~~i~~rtmeilr~l~Gl~~~l~~~-~~~~----- 112 (716)
+..+||+||||||+||++|..|+++|+ +|+||||.+.+...-........ .+ ++....... ..+.
T Consensus 4 ~~~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~GG~~~~~~~~~~------~~-~ip~~~~~~~~~~~~~g~~ 76 (447)
T 2gv8_A 4 PTIRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGVWNYTSTLSN------KL-PVPSTNPILTTEPIVGPAA 76 (447)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSSTTCSCCSCCCS------CC-CSSBCCTTCCCCCBCCSSS
T ss_pred CCCCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCCCeecCCCCCCc------cc-ccccccccccccccccccc
Confidence 345899999999999999999999999 99999998654210000000000 00 000000000 0000
Q ss_pred -cccceeEEeecCCCCceeeccCCCccccccccCCccccccChHHHHHHHHHHHHhcCceeecccccccccccccccceE
Q 005056 113 -DLWRKFIYCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREI 191 (716)
Q Consensus 113 -~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~l~~~~~~~~~v 191 (716)
..+....+ ..+..........+ .++. .........++..+.+.|.+.+.+.+. .|
T Consensus 77 ~~~~~~~~~-~~l~~~~~~~~~~~--~~~~--~~~~~~~~~~~~~l~~~l~~~~~~~~~-------------------~i 132 (447)
T 2gv8_A 77 LPVYPSPLY-RDLQTNTPIELMGY--CDQS--FKPQTLQFPHRHTIQEYQRIYAQPLLP-------------------FI 132 (447)
T ss_dssp CCBCCCCCC-TTCBCSSCHHHHSC--TTCC--CCTTCCSSCBHHHHHHHHHHHHGGGGG-------------------GE
T ss_pred cCCccCchh-hhhccCCCHHHhcc--CCCC--CCCCCCCCCCHHHHHHHHHHHHHHhhC-------------------eE
Confidence 00000000 00000000000000 0000 000011234677888888888877654 78
Q ss_pred EeCcEEEEEEecCCeEEEEEEeccCCceeeEEEEecEEEecCCCChhh
Q 005056 192 LMGHECVSVSATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGSTV 239 (716)
Q Consensus 192 ~~g~~v~~i~~~~~gv~v~v~~~~~g~~~~~~i~ad~VVgADG~~S~V 239 (716)
+++++|++++.+++++++++....+|+. .+++++|+||.|+|.+|.-
T Consensus 133 ~~~t~V~~v~~~~~~~~V~~~~~~~G~~-~~~~~~d~VVvAtG~~s~p 179 (447)
T 2gv8_A 133 KLATDVLDIEKKDGSWVVTYKGTKAGSP-ISKDIFDAVSICNGHYEVP 179 (447)
T ss_dssp ECSEEEEEEEEETTEEEEEEEESSTTCC-EEEEEESEEEECCCSSSSB
T ss_pred EeCCEEEEEEeCCCeEEEEEeecCCCCe-eEEEEeCEEEECCCCCCCC
Confidence 9999999999988888887763222420 2468999999999998753
No 66
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=99.00 E-value=2.4e-09 Score=122.00 Aligned_cols=153 Identities=15% Similarity=0.210 Sum_probs=91.4
Q ss_pred ccCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCC-CCCCCCe---eeeCh-hHHHHHHhhhchHHHH-HhcCCCcccc
Q 005056 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA-FSTHPQA---HFINN-RYALVFRKLDGLAEEI-ERSQPPVDLW 115 (716)
Q Consensus 42 ~~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~-~~~~p~a---~~i~~-rtmeilr~l~Gl~~~l-~~~~~~~~~~ 115 (716)
.++||+|||||++|+++|+.|++.|++|+|||++.. ....++. .++.. ...+.++.++|+...+ ...+.
T Consensus 27 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~Cnps~ggia~~~lv~ei~algg~~~~~~d~~gi----- 101 (651)
T 3ces_A 27 DPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDALGGLMAKAIDQAGI----- 101 (651)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSSSEEESTTHHHHHHHHHHTTCSHHHHHHHHEE-----
T ss_pred CcCCEEEECChHHHHHHHHHHHhCCCCEEEEeecccccccccccccccchhhHHHHHHHHHhccHHHHHhhhccc-----
Confidence 458999999999999999999999999999999852 2222221 11111 1222333332221111 11110
Q ss_pred ceeEEeecCCCCceeeccCCCccccccccCCccccccChHHHHHHHHHHHHh-cCceeecccccccccccccccceEEeC
Q 005056 116 RKFIYCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEK-LNFKICTSEGTEGLHNHLLQGREILMG 194 (716)
Q Consensus 116 ~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~-~g~~~~~~~~~~~l~~~~~~~~~v~~g 194 (716)
.+.......|.. .......+++..+...|.+.+++ .|+ +| ++
T Consensus 102 -~f~~l~~~kgpa----------------v~~~r~~~Dr~~~~~~L~e~Le~~~GV-------------------~I-~~ 144 (651)
T 3ces_A 102 -QFRILNASKGPA----------------VRATRAQADRVLYRQAVRTALENQPNL-------------------MI-FQ 144 (651)
T ss_dssp -EEEEESTTSCGG----------------GCEEEEEECHHHHHHHHHHHHHTCTTE-------------------EE-EE
T ss_pred -chhhhhcccCcc----------------cccchhhCCHHHHHHHHHHHHHhCCCC-------------------EE-EE
Confidence 011100000000 00011246777888889998887 465 77 67
Q ss_pred cEEEEEEecCCeEE-EEEEeccCCceeeEEEEecEEEecCCCChhhhhhc
Q 005056 195 HECVSVSATDQCIN-VIASFLKEGKCTERNIQCNILIGTDGAGSTVRKLV 243 (716)
Q Consensus 195 ~~v~~i~~~~~gv~-v~v~~~~~g~~~~~~i~ad~VVgADG~~S~VR~~l 243 (716)
++|+++..+++.|. |.+ .+| .+++||.||.|+|.+|..+...
T Consensus 145 ~~V~~L~~e~g~V~GV~t---~dG----~~I~Ad~VVLATGt~s~~~~i~ 187 (651)
T 3ces_A 145 QAVEDLIVENDRVVGAVT---QMG----LKFRAKAVVLTVGTFLDGKIHI 187 (651)
T ss_dssp CCEEEEEESSSBEEEEEE---TTS----EEEEEEEEEECCSTTTCCEEEC
T ss_pred EEEEEEEecCCEEEEEEE---CCC----CEEECCEEEEcCCCCccCcccc
Confidence 89999988777653 332 245 2789999999999998766543
No 67
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=98.98 E-value=7.2e-09 Score=116.84 Aligned_cols=38 Identities=26% Similarity=0.432 Sum_probs=35.6
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCC
Q 005056 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (716)
Q Consensus 41 ~~~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~ 78 (716)
+.++||||||||++||++|+.|+++|.+|+||||.+..
T Consensus 39 ~~~~DVvVVGaG~AGl~AA~~aa~~G~~V~vlEk~~~~ 76 (510)
T 4at0_A 39 DYEADVVVAGYGIAGVAASIEAARAGADVLVLERTSGW 76 (510)
T ss_dssp SEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCC
Confidence 46699999999999999999999999999999999865
No 68
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=98.98 E-value=4e-09 Score=121.04 Aligned_cols=70 Identities=14% Similarity=0.235 Sum_probs=53.1
Q ss_pred hHHHHHHHHHHHHhcC-ceeecccccccccccccccceEEeCcEEEEEEecCCeEE-EEEEeccCCceeeEEEEecEEEe
Q 005056 154 QYKLNKLLLKQLEKLN-FKICTSEGTEGLHNHLLQGREILMGHECVSVSATDQCIN-VIASFLKEGKCTERNIQCNILIG 231 (716)
Q Consensus 154 q~~Le~~L~~~~~~~g-~~~~~~~~~~~l~~~~~~~~~v~~g~~v~~i~~~~~gv~-v~v~~~~~g~~~~~~i~ad~VVg 231 (716)
...+...|.+.+.+.| + +|+++++++++..+++.|. +.+....+|+ ..+|+|+.||.
T Consensus 133 g~~l~~~L~~~~~~~gnv-------------------~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~--~~~i~A~~VVl 191 (602)
T 1kf6_A 133 GFHMLHTLFQTSLQFPQI-------------------QRFDEHFVLDILVDDGHVRGLVAMNMMEGT--LVQIRANAVVM 191 (602)
T ss_dssp HHHHHHHHHHHHTTCTTE-------------------EEEETEEEEEEEEETTEEEEEEEEETTTTE--EEEEECSCEEE
T ss_pred HHHHHHHHHHHHHhCCCc-------------------EEEeCCEEEEEEEeCCEEEEEEEEEcCCCc--EEEEEcCeEEE
Confidence 4578888989888877 5 9999999999998777543 2233223453 35799999999
Q ss_pred cCCCChhhhhhcC
Q 005056 232 TDGAGSTVRKLVG 244 (716)
Q Consensus 232 ADG~~S~VR~~lg 244 (716)
|+|..|.++....
T Consensus 192 AtGg~s~~~~~~~ 204 (602)
T 1kf6_A 192 ATGGAGRVYRYNT 204 (602)
T ss_dssp CCCCCGGGSSSBS
T ss_pred CCCCCcccccCcC
Confidence 9999999976553
No 69
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=98.96 E-value=6.1e-08 Score=108.70 Aligned_cols=61 Identities=18% Similarity=0.233 Sum_probs=46.8
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCCCCCCC------------eee---eChhHHHHHHhhhchHHH
Q 005056 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQ------------AHF---INNRYALVFRKLDGLAEE 104 (716)
Q Consensus 43 ~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~~~~p~------------a~~---i~~rtmeilr~l~Gl~~~ 104 (716)
++||+|||||++||++|..|+++|++|+|+|+++.+.-+-+ ++. ..+..++.++++ |+.+.
T Consensus 39 ~~~v~iiGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GGr~~t~~~~g~~~d~G~~~~~~~~~~~~~~l~~l-gl~~~ 114 (495)
T 2vvm_A 39 PWDVIVIGGGYCGLTATRDLTVAGFKTLLLEARDRIGGRSWSSNIDGYPYEMGGTWVHWHQSHVWREITRY-KMHNA 114 (495)
T ss_dssp CEEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSBSBTTCCEEEETTEEEECSCCCBCTTSHHHHHHHHHT-TCTTC
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCCEEEEeCCCCCCCcceecccCCeeecCCCeEecCccHHHHHHHHHc-CCcce
Confidence 37999999999999999999999999999999976532211 112 246777777777 76543
No 70
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=98.96 E-value=9.4e-10 Score=116.56 Aligned_cols=120 Identities=18% Similarity=0.200 Sum_probs=80.0
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCCCCCCCeeeeChhHHHHHHhhhchHHHHHhcCCCccccceeEE
Q 005056 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIY 120 (716)
Q Consensus 41 ~~~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~~~~p~a~~i~~rtmeilr~l~Gl~~~l~~~~~~~~~~~~~~~ 120 (716)
+..+||+||||||+|+++|+.|+++|++|+|||+......... |.. ... .
T Consensus 6 ~~~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~~~~~g----------------g~~---~~~-------~---- 55 (333)
T 1vdc_A 6 THNTRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMANDIAPG----------------GQL---TTT-------T---- 55 (333)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTT----------------CGG---GGC-------S----
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCeEEEEeccCccccCCC----------------cee---eec-------c----
Confidence 4568999999999999999999999999999998211100110 100 000 0
Q ss_pred eecCCCCceeeccCCCccccccccCCccccccChHHHHHHHHHHHHhcCceeecccccccccccccccceEEeCcEEEEE
Q 005056 121 CTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSV 200 (716)
Q Consensus 121 ~~~~~g~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~l~~~~~~~~~v~~g~~v~~i 200 (716)
.+.. .|.....+.+..+...|.+.+.+.++ ++++++ ++++
T Consensus 56 -------~~~~-------------~~~~~~~~~~~~~~~~l~~~~~~~gv-------------------~~~~~~-v~~i 95 (333)
T 1vdc_A 56 -------DVEN-------------FPGFPEGILGVELTDKFRKQSERFGT-------------------TIFTET-VTKV 95 (333)
T ss_dssp -------EECC-------------STTCTTCEEHHHHHHHHHHHHHHTTC-------------------EEECCC-CCEE
T ss_pred -------cccc-------------CCCCccCCCHHHHHHHHHHHHHHCCC-------------------EEEEeE-EEEE
Confidence 0000 00001123456777778888888776 888887 8899
Q ss_pred EecCCeEEEEEEeccCCceeeEEEEecEEEecCCCChh
Q 005056 201 SATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGST 238 (716)
Q Consensus 201 ~~~~~gv~v~v~~~~~g~~~~~~i~ad~VVgADG~~S~ 238 (716)
+.+++.+++++ ++ .++++|+||.|+|.++.
T Consensus 96 ~~~~~~~~v~~----~~----~~~~~~~vv~A~G~~~~ 125 (333)
T 1vdc_A 96 DFSSKPFKLFT----DS----KAILADAVILAIGAVAK 125 (333)
T ss_dssp ECSSSSEEEEC----SS----EEEEEEEEEECCCEEEC
T ss_pred EEcCCEEEEEE----CC----cEEEcCEEEECCCCCcC
Confidence 88777766553 33 26899999999999764
No 71
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=98.94 E-value=2.8e-09 Score=120.83 Aligned_cols=141 Identities=18% Similarity=0.202 Sum_probs=87.8
Q ss_pred CccCCEEEECCCHHHHHHHHHHH-hCCCCEEEECCCCCCCCCCCeeeeChhHHHHHHhhhchHHHHHhcCCCccccceeE
Q 005056 41 EAVVPVLIVGAGPVGLVLSILLT-KLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFI 119 (716)
Q Consensus 41 ~~~~dVlIVGaGpaGLt~Al~La-r~Gi~v~liEr~~~~~~~p~a~~i~~rtmeilr~l~Gl~~~l~~~~~~~~~~~~~~ 119 (716)
+.++||+|||||++|+++|+.|+ +.|++|+||||++... |.+....-.+...+....
T Consensus 6 ~~~~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~G--------------------Gtw~~~~ypg~~~d~~s~-- 63 (540)
T 3gwf_A 6 THTVDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPG--------------------GTWYWNRYPGALSDTESH-- 63 (540)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSSC--------------------THHHHCCCTTCEEEEEGG--
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCCC--------------------CcccccCCCCceecCCcc--
Confidence 45689999999999999999999 9999999999987542 111000000000000000
Q ss_pred EeecCCCCceeeccCCCccccccccCCccccccChHHHHHHHHHHHHhcCceeecccccccccccccccceEEeCcEEEE
Q 005056 120 YCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVS 199 (716)
Q Consensus 120 ~~~~~~g~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~l~~~~~~~~~v~~g~~v~~ 199 (716)
...... .. .... ..+......++..+...|.+.+++.++. ..++++++|++
T Consensus 64 ---------~~~~~~-~~-~~~~-~~~~~~~~~~~~ei~~~l~~~~~~~g~~-----------------~~i~~~~~V~~ 114 (540)
T 3gwf_A 64 ---------LYRFSF-DR-DLLQ-ESTWKTTYITQPEILEYLEDVVDRFDLR-----------------RHFKFGTEVTS 114 (540)
T ss_dssp ---------GSSCCS-CH-HHHH-HCCCSBSEEEHHHHHHHHHHHHHHTTCG-----------------GGEEESCCEEE
T ss_pred ---------eeeecc-cc-cccc-CCCCcccCCCHHHHHHHHHHHHHHcCCc-----------------ceeEeccEEEE
Confidence 000000 00 0000 0001112356788888898888887751 27899999999
Q ss_pred EEecCC--eEEEEEEeccCCceeeEEEEecEEEecCCCChhh
Q 005056 200 VSATDQ--CINVIASFLKEGKCTERNIQCNILIGTDGAGSTV 239 (716)
Q Consensus 200 i~~~~~--gv~v~v~~~~~g~~~~~~i~ad~VVgADG~~S~V 239 (716)
++.+++ .+++++. +|+ ++++|+||.|+|..|.-
T Consensus 115 i~~~~~~~~~~V~~~---~G~----~i~ad~lV~AtG~~s~p 149 (540)
T 3gwf_A 115 ALYLDDENLWEVTTD---HGE----VYRAKYVVNAVGLLSAI 149 (540)
T ss_dssp EEEETTTTEEEEEET---TSC----EEEEEEEEECCCSCCSB
T ss_pred EEEeCCCCEEEEEEc---CCC----EEEeCEEEECCcccccC
Confidence 998776 5555543 453 68999999999998743
No 72
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=98.94 E-value=6.9e-09 Score=117.80 Aligned_cols=152 Identities=15% Similarity=0.170 Sum_probs=91.7
Q ss_pred ccCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCC-CCCCCCCe---eeeCh-hHHHHHHhhhchHHHHH-hcCCCcccc
Q 005056 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK-AFSTHPQA---HFINN-RYALVFRKLDGLAEEIE-RSQPPVDLW 115 (716)
Q Consensus 42 ~~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~-~~~~~p~a---~~i~~-rtmeilr~l~Gl~~~l~-~~~~~~~~~ 115 (716)
.++||+|||||++|+++|+.|++.|++|+|||++. .....++. .++.. ...+.++.++|+...+. ..+.
T Consensus 26 ~~yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~~~iG~~~Cnps~GGia~g~lv~eldalgg~~~~~~d~~gi----- 100 (637)
T 2zxi_A 26 DEFDVVVIGGGHAGIEAALAAARMGAKTAMFVLNADTIGQMSCNPAIGGIAKGIVVREIDALGGEMGKAIDQTGI----- 100 (637)
T ss_dssp GCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCCSCSEEECTTHHHHHHHHHHHTCSHHHHHHHHEE-----
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCCEEEEEecccccCCcCccccccccchHHHHHHHHHhhhHHHHHhhhccc-----
Confidence 45899999999999999999999999999999985 22222221 11211 22233333423222211 1110
Q ss_pred ceeEEeecCCCCceeeccCCCccccccccCCccccccChHHHHHHHHHHHHhc-CceeecccccccccccccccceEEeC
Q 005056 116 RKFIYCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKL-NFKICTSEGTEGLHNHLLQGREILMG 194 (716)
Q Consensus 116 ~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~-g~~~~~~~~~~~l~~~~~~~~~v~~g 194 (716)
.+.......|... ......+++..+...|.+.+++. |+ +| ++
T Consensus 101 -~f~~l~~~kGpav----------------~~~r~~~Dr~~~~~~L~~~Le~~~GV-------------------eI-~~ 143 (637)
T 2zxi_A 101 -QFKMLNTRKGKAV----------------QSPRAQADKKRYREYMKKVCENQENL-------------------YI-KQ 143 (637)
T ss_dssp -EEEEESTTSCGGG----------------CEEEEEECHHHHHHHHHHHHHTCTTE-------------------EE-EE
T ss_pred -ceeecccccCccc----------------cchhhhCCHHHHHHHHHHHHHhCCCC-------------------EE-EE
Confidence 0111000001000 00112456788888899988874 55 77 57
Q ss_pred cEEEEEEecCCeEE-EEEEeccCCceeeEEEEecEEEecCCCChhhhhh
Q 005056 195 HECVSVSATDQCIN-VIASFLKEGKCTERNIQCNILIGTDGAGSTVRKL 242 (716)
Q Consensus 195 ~~v~~i~~~~~gv~-v~v~~~~~g~~~~~~i~ad~VVgADG~~S~VR~~ 242 (716)
++|+++..+++.|. |.+ .+|. +++|+.||.|+|..|..+..
T Consensus 144 ~~Vt~L~~e~g~V~GV~t---~dG~----~i~AdaVVLATG~~s~~~~~ 185 (637)
T 2zxi_A 144 EEVVDIIVKNNQVVGVRT---NLGV----EYKTKAVVVTTGTFLNGVIY 185 (637)
T ss_dssp SCEEEEEESSSBEEEEEE---TTSC----EEECSEEEECCTTCBTCEEE
T ss_pred eEEEEEEecCCEEEEEEE---CCCc----EEEeCEEEEccCCCccCcee
Confidence 89999988777654 332 2453 68999999999998766543
No 73
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=98.93 E-value=2.1e-09 Score=119.01 Aligned_cols=70 Identities=20% Similarity=0.285 Sum_probs=53.5
Q ss_pred ccChHHHHHHHHHHHHhcCceeecccccccccccccccceEEeCcEEEEEEe---------------cCCeEEEEEEecc
Q 005056 151 HFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSA---------------TDQCINVIASFLK 215 (716)
Q Consensus 151 ~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~l~~~~~~~~~v~~g~~v~~i~~---------------~~~gv~v~v~~~~ 215 (716)
.++...+...|.+.+++.|+ +|+++++|++++. +++++. .+. .+
T Consensus 177 ~~~~~~l~~~L~~~~~~~Gv-------------------~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~-~V~-t~ 235 (448)
T 3axb_A 177 FLDAEKVVDYYYRRASGAGV-------------------EFIFGRRVVGVELKPRVELGIEGEPLPWQEARAS-AAV-LS 235 (448)
T ss_dssp ECCHHHHHHHHHHHHHHTTC-------------------EEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEE-EEE-ET
T ss_pred EEcHHHHHHHHHHHHHhCCC-------------------EEEcCCeEEEEEecccccccccccccccCCCceE-EEE-eC
Confidence 45667888899999998887 9999999999987 555542 222 12
Q ss_pred CCceeeEEE--EecEEEecCCCChh-hhhhcCCC
Q 005056 216 EGKCTERNI--QCNILIGTDGAGST-VRKLVGID 246 (716)
Q Consensus 216 ~g~~~~~~i--~ad~VVgADG~~S~-VR~~lgi~ 246 (716)
+| ++ +||.||.|.|++|. +.+.+|+.
T Consensus 236 ~g-----~i~~~Ad~VV~AtG~~s~~l~~~~g~~ 264 (448)
T 3axb_A 236 DG-----TRVEVGEKLVVAAGVWSNRLLNPLGID 264 (448)
T ss_dssp TS-----CEEEEEEEEEECCGGGHHHHHGGGTCC
T ss_pred CC-----EEeecCCEEEECCCcCHHHHHHHcCCC
Confidence 34 47 99999999999987 77777654
No 74
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=98.93 E-value=7.4e-09 Score=108.77 Aligned_cols=143 Identities=19% Similarity=0.275 Sum_probs=87.5
Q ss_pred ccCCEEEECCCHHHHHHHHHHHhC--CCCEEEECCCCCCCCC-------CCeeeeChhHHHHHHhhhchHHHHHhcCCCc
Q 005056 42 AVVPVLIVGAGPVGLVLSILLTKL--GIKCSVLEKNKAFSTH-------PQAHFINNRYALVFRKLDGLAEEIERSQPPV 112 (716)
Q Consensus 42 ~~~dVlIVGaGpaGLt~Al~Lar~--Gi~v~liEr~~~~~~~-------p~a~~i~~rtmeilr~l~Gl~~~l~~~~~~~ 112 (716)
.++||+||||||+||++|+.|+++ |.+|+||||.+.+... .+...+.....+.|+.+ |+ +.
T Consensus 64 ~~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg~~~~g~~~~~~~~~~~~~~~L~~~-Gv---------~~ 133 (326)
T 2gjc_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQEL-EI---------PY 133 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCGGGCCCEEEETTTHHHHHHT-TC---------CC
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccccccccccCcccchhhhhhHHHHHHHhh-Cc---------cc
Confidence 457999999999999999999999 9999999998765311 11122333333344333 21 11
Q ss_pred cccceeEEeecCCCCceeeccCCCccccccccCCccccccChHHHHHHHHHHHHhc-CceeecccccccccccccccceE
Q 005056 113 DLWRKFIYCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKL-NFKICTSEGTEGLHNHLLQGREI 191 (716)
Q Consensus 113 ~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~-g~~~~~~~~~~~l~~~~~~~~~v 191 (716)
.. .+.. ........+...|.+++.+. |+ ++
T Consensus 134 ~~----------~g~~--------------------~~~~~~~~~~~~L~~~a~~~~GV-------------------~i 164 (326)
T 2gjc_A 134 ED----------EGDY--------------------VVVKHAALFISTVLSKVLQLPNV-------------------KL 164 (326)
T ss_dssp EE----------CSSE--------------------EEESCHHHHHHHHHHHHHTSTTE-------------------EE
T ss_pred cc----------CCCe--------------------EEEcchHHHHHHHHHHHHHhcCc-------------------EE
Confidence 00 0100 00112346677888888775 55 99
Q ss_pred EeCcEEEEEEecC----C--eEE-EEEEec---cCC----ceeeEEEEe---------------cEEEecCCCChhhhhh
Q 005056 192 LMGHECVSVSATD----Q--CIN-VIASFL---KEG----KCTERNIQC---------------NILIGTDGAGSTVRKL 242 (716)
Q Consensus 192 ~~g~~v~~i~~~~----~--gv~-v~v~~~---~~g----~~~~~~i~a---------------d~VVgADG~~S~VR~~ 242 (716)
+.+++|+++..++ + .|+ +.+... .++ .....+|+| ++||.|+|..|++.+.
T Consensus 165 ~~~~~V~~Ll~~~~~~~g~~rV~GVvv~~~~v~~~g~~~~~~d~~~I~A~G~~~~~~~~~~~~~~~VV~ATG~~~~~~~~ 244 (326)
T 2gjc_A 165 FNATCVEDLVTRPPTEKGEVTVAGVVTNWTLVTQAHGTQCCMDPNVIELAGYKNDGTRDLSQKHGVILSTTGHDGPFGAF 244 (326)
T ss_dssp ETTEEEEEEEECCCC-----CEEEEEEEEHHHHTC---CCCCCCEEEEESCCCSSSCCCSSTTCCEEEECCCCC--CCSH
T ss_pred EecceeeeeeecccccCCCcEEEEEEecceeecccccceeccCceEEEEeeccccccccccccCCEEEECcCCCchHHHH
Confidence 9999999998763 2 332 122110 111 001357999 9999999999988776
Q ss_pred c
Q 005056 243 V 243 (716)
Q Consensus 243 l 243 (716)
+
T Consensus 245 ~ 245 (326)
T 2gjc_A 245 C 245 (326)
T ss_dssp H
T ss_pred H
Confidence 5
No 75
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=98.93 E-value=5.1e-09 Score=125.09 Aligned_cols=71 Identities=14% Similarity=0.212 Sum_probs=53.9
Q ss_pred ccChHHHHHHHHHHHHhcCceeecccccccccccccccceEEeCcEEEEEEecCCeEEEEEEeccCCceeeEEEEecEEE
Q 005056 151 HFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSATDQCINVIASFLKEGKCTERNIQCNILI 230 (716)
Q Consensus 151 ~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~l~~~~~~~~~v~~g~~v~~i~~~~~gv~v~v~~~~~g~~~~~~i~ad~VV 230 (716)
.++...+...|.+.+.+.|+ +|+++++|++++.+++++.. +. .++| +|+||+||
T Consensus 147 ~v~p~~l~~~L~~~a~~~Gv-------------------~i~~~t~V~~i~~~~~~v~~-V~-t~~G-----~i~Ad~VV 200 (830)
T 1pj5_A 147 LASAARAVQLLIKRTESAGV-------------------TYRGSTTVTGIEQSGGRVTG-VQ-TADG-----VIPADIVV 200 (830)
T ss_dssp EECHHHHHHHHHHHHHHTTC-------------------EEECSCCEEEEEEETTEEEE-EE-ETTE-----EEECSEEE
T ss_pred eEcHHHHHHHHHHHHHHcCC-------------------EEECCceEEEEEEeCCEEEE-EE-ECCc-----EEECCEEE
Confidence 44667888999999999887 99999999999988777542 22 1233 68999999
Q ss_pred ecCCCChhh-hhhcCCCc
Q 005056 231 GTDGAGSTV-RKLVGIDL 247 (716)
Q Consensus 231 gADG~~S~V-R~~lgi~~ 247 (716)
.|+|++|.. .+.+|+..
T Consensus 201 ~AaG~~s~~l~~~~g~~~ 218 (830)
T 1pj5_A 201 SCAGFWGAKIGAMIGMAV 218 (830)
T ss_dssp ECCGGGHHHHHHTTTCCC
T ss_pred ECCccchHHHHHHhCCCc
Confidence 999999864 45556543
No 76
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=98.93 E-value=1.2e-07 Score=108.24 Aligned_cols=73 Identities=19% Similarity=0.083 Sum_probs=54.3
Q ss_pred cChHHHHHHHHHHHHhcCceeecccccccccccccccceEEeCcEEEEEEecCCeEE-EEEEeccCCceeeEEEEecEEE
Q 005056 152 FSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSATDQCIN-VIASFLKEGKCTERNIQCNILI 230 (716)
Q Consensus 152 i~q~~Le~~L~~~~~~~g~~~~~~~~~~~l~~~~~~~~~v~~g~~v~~i~~~~~gv~-v~v~~~~~g~~~~~~i~ad~VV 230 (716)
++-..+...|.+.+.+.|+ +|+++++|+++..+++.|. +++.+..+++ ..+|+||.||
T Consensus 185 v~~~~l~~~l~~~a~~~Ga-------------------~i~~~t~V~~l~~~~~~v~gV~~~d~~tg~--~~~i~A~~VV 243 (571)
T 2rgh_A 185 NNDARLVIDNIKKAAEDGA-------------------YLVSKMKAVGFLYEGDQIVGVKARDLLTDE--VIEIKAKLVI 243 (571)
T ss_dssp CCHHHHHHHHHHHHHHTTC-------------------EEESSEEEEEEEEETTEEEEEEEEETTTCC--EEEEEBSCEE
T ss_pred EchHHHHHHHHHHHHHcCC-------------------eEEeccEEEEEEEeCCEEEEEEEEEcCCCC--EEEEEcCEEE
Confidence 4556677778888888887 9999999999998877643 4554322343 3479999999
Q ss_pred ecCCCCh-hhhhhcCC
Q 005056 231 GTDGAGS-TVRKLVGI 245 (716)
Q Consensus 231 gADG~~S-~VR~~lgi 245 (716)
.|.|++| .+++.+++
T Consensus 244 ~AaG~ws~~l~~~~g~ 259 (571)
T 2rgh_A 244 NTSGPWVDKVRNLNFT 259 (571)
T ss_dssp ECCGGGHHHHHTTCCS
T ss_pred ECCChhHHHHHHhhcc
Confidence 9999998 46666554
No 77
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=98.92 E-value=1e-07 Score=104.64 Aligned_cols=35 Identities=31% Similarity=0.400 Sum_probs=32.8
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCC
Q 005056 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~ 78 (716)
+||+|||||++||++|+.|+++|.+|+|||+++..
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~~~~ 36 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTNAGKKVLLLEGGERL 36 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCEEEECCcHHHHHHHHHHHHcCCeEEEEecCCCc
Confidence 69999999999999999999999999999997654
No 78
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=98.91 E-value=1.1e-08 Score=116.63 Aligned_cols=151 Identities=17% Similarity=0.264 Sum_probs=89.8
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCC-CCCCCCeeee-ChhHHHHHHhh---hchHHHH-HhcCCCccc
Q 005056 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA-FSTHPQAHFI-NNRYALVFRKL---DGLAEEI-ERSQPPVDL 114 (716)
Q Consensus 41 ~~~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~-~~~~p~a~~i-~~rtmeilr~l---~Gl~~~l-~~~~~~~~~ 114 (716)
+.++||+|||||++|+++|+.|+++|++|+|||++.. ....++...+ ......+++.+ +|+.... ...+.
T Consensus 19 ~~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~c~ps~gGia~~~lv~el~al~g~~~~~~d~~gi---- 94 (641)
T 3cp8_A 19 SHMYDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVARMSCNPAIGGVAKGQITREIDALGGEMGKAIDATGI---- 94 (641)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCSEEECHHHHHHHHHHHHHTCSHHHHHHHHEE----
T ss_pred cCcCCEEEECccHHHHHHHHHHHHCCCcEEEEEecccccCCCccccchhhhhHHHHHHHHHhcccHHHHHHHhcCC----
Confidence 3458999999999999999999999999999999852 2222221111 11122333332 2222111 11110
Q ss_pred cceeEEeecCCCCceeeccCCCccccccccCCccccccChHHHHHHHHHHHHhc-CceeecccccccccccccccceEEe
Q 005056 115 WRKFIYCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKL-NFKICTSEGTEGLHNHLLQGREILM 193 (716)
Q Consensus 115 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~-g~~~~~~~~~~~l~~~~~~~~~v~~ 193 (716)
.+.......|.. . ......+++..+...|.+.+++. |+ ++ +
T Consensus 95 --~f~~l~~~kgpa-----------v-----~~~r~~~Dr~~l~~~L~~~l~~~~GV-------------------~I-~ 136 (641)
T 3cp8_A 95 --QFRMLNRSKGPA-----------M-----HSPRAQADKTQYSLYMRRIVEHEPNI-------------------DL-L 136 (641)
T ss_dssp --EEEEECSSSCTT-----------T-----CEEEEEECHHHHHHHHHHHHHTCTTE-------------------EE-E
T ss_pred --chhhcccccCcc-----------c-----cchhhhcCHHHHHHHHHHHHHhCCCC-------------------EE-E
Confidence 011100000000 0 00113467888889999888875 55 77 4
Q ss_pred CcEEEEEEecCCeEE-EEEEeccCCceeeEEEEecEEEecCCCChhhh
Q 005056 194 GHECVSVSATDQCIN-VIASFLKEGKCTERNIQCNILIGTDGAGSTVR 240 (716)
Q Consensus 194 g~~v~~i~~~~~gv~-v~v~~~~~g~~~~~~i~ad~VVgADG~~S~VR 240 (716)
+.+|+.+..+++.|+ |++ .+|. +++||.||.|+|.++..+
T Consensus 137 ~~~V~~L~~d~g~V~GV~t---~~G~----~i~Ad~VVLATG~~s~~~ 177 (641)
T 3cp8_A 137 QDTVIGVSANSGKFSSVTV---RSGR----AIQAKAAILACGTFLNGL 177 (641)
T ss_dssp ECCEEEEEEETTEEEEEEE---TTSC----EEEEEEEEECCTTCBTCE
T ss_pred eeEEEEEEecCCEEEEEEE---CCCc----EEEeCEEEECcCCCCCcc
Confidence 568999988777765 433 2453 689999999999987543
No 79
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=98.90 E-value=1.2e-08 Score=115.95 Aligned_cols=142 Identities=20% Similarity=0.175 Sum_probs=87.0
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCCCCCCCeeeeChhHHHHHHhhhchHHHHHhcCCCccccceeEE
Q 005056 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIY 120 (716)
Q Consensus 41 ~~~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~~~~p~a~~i~~rtmeilr~l~Gl~~~l~~~~~~~~~~~~~~~ 120 (716)
+.++||+|||||++|+++|+.|+++|++|+||||.+... |.+. ....|.....
T Consensus 14 ~~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~G--------------------G~w~---~~~~pg~~~d---- 66 (542)
T 1w4x_A 14 PEEVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVG--------------------GVWY---WNRYPGARCD---- 66 (542)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC--------------------THHH---HCCCTTCBCS----
T ss_pred CCCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCC--------------------Cccc---ccCCCceeec----
Confidence 456899999999999999999999999999999987642 1110 0001100000
Q ss_pred eecCCCCceeeccCCCccccccccCCccccccChHHHHHHHHHHHHhcCceeecccccccccccccccceEEeCcEEEEE
Q 005056 121 CTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSV 200 (716)
Q Consensus 121 ~~~~~g~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~l~~~~~~~~~v~~g~~v~~i 200 (716)
....+..... .+..+.. .+......++..+...|.+.+++.+. ...++++++|+++
T Consensus 67 ----~~~~~~~~~f-~~~~~~~--~~~~~~~~~~~~i~~yl~~~~~~~~l-----------------~~~i~~~~~V~~~ 122 (542)
T 1w4x_A 67 ----IESIEYCYSF-SEEVLQE--WNWTERYASQPEILRYINFVADKFDL-----------------RSGITFHTTVTAA 122 (542)
T ss_dssp ----SCTTTSSCCS-CHHHHHH--CCCCBSSCBHHHHHHHHHHHHHHTTG-----------------GGGEECSCCEEEE
T ss_pred ----cccccccccc-Chhhhhc--cCcccccCCHHHHHHHHHHHHHHcCC-----------------CceEEcCcEEEEE
Confidence 0000000000 0000000 00011234678888888887777653 1379999999999
Q ss_pred EecCC--eEEEEEEeccCCceeeEEEEecEEEecCCCChhhh
Q 005056 201 SATDQ--CINVIASFLKEGKCTERNIQCNILIGTDGAGSTVR 240 (716)
Q Consensus 201 ~~~~~--gv~v~v~~~~~g~~~~~~i~ad~VVgADG~~S~VR 240 (716)
+.+++ .+++++. +|+ +++||+||.|+|..|.-+
T Consensus 123 ~~~~~~~~w~V~~~---~G~----~~~ad~vV~AtG~~s~p~ 157 (542)
T 1w4x_A 123 AFDEATNTWTVDTN---HGD----RIRARYLIMASGQLSVPQ 157 (542)
T ss_dssp EEETTTTEEEEEET---TCC----EEEEEEEEECCCSCCCCC
T ss_pred EEcCCCCeEEEEEC---CCC----EEEeCEEEECcCCCCCCC
Confidence 88764 4555442 453 689999999999987543
No 80
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=98.88 E-value=9.5e-09 Score=114.42 Aligned_cols=157 Identities=15% Similarity=0.185 Sum_probs=89.2
Q ss_pred CCEEEECCCHHHHHHHHHHHh---CCCC---EEEECCCCCCCCCCCeeeeChhHHHHHHhhhchHHHHHhcCCCcc--cc
Q 005056 44 VPVLIVGAGPVGLVLSILLTK---LGIK---CSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVD--LW 115 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar---~Gi~---v~liEr~~~~~~~p~a~~i~~rtmeilr~l~Gl~~~l~~~~~~~~--~~ 115 (716)
.||+||||||+||++|..|++ .|++ |+||||.+.+. +...... .. |+. ..+.+.. .+
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~G----G~w~~~~------~~-g~~----~~g~~~~~~~y 67 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWG----GQWNYTW------RT-GLD----ENGEPVHSSMY 67 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSC----GGGSCCS------CC-SBC----TTSSBCCCCCC
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCC----CEeecCC------CC-Ccc----ccCCCCcCccc
Confidence 589999999999999999999 9999 99999987542 0000000 00 100 0000100 00
Q ss_pred ceeEEeecCCCCceeeccCCCccccccccCCccccccChHHHHHHHHHHHHhcCceeecccccccccccccccceEEeCc
Q 005056 116 RKFIYCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGH 195 (716)
Q Consensus 116 ~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~l~~~~~~~~~v~~g~ 195 (716)
... ... .......+.. ..+...........+++..+...|.+.+++.++. ..|++++
T Consensus 68 ~~l--~~~-~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~-----------------~~i~~~~ 124 (464)
T 2xve_A 68 RYL--WSN-GPKECLEFAD---YTFDEHFGKPIASYPPREVLWDYIKGRVEKAGVR-----------------KYIRFNT 124 (464)
T ss_dssp TTC--BCS-SCGGGTCBTT---BCHHHHHSSCCCSSCBHHHHHHHHHHHHHHHTCG-----------------GGEECSE
T ss_pred cch--hhc-CChhhcccCC---CCCCcccCCCCCCCCCHHHHHHHHHHHHHHcCCc-----------------ceEEeCC
Confidence 000 000 0000000000 0000000000122456788888898888888761 1289999
Q ss_pred EEEEEEecCC--eEEEEEEeccCCceeeEEEEecEEEecCCCChhhh
Q 005056 196 ECVSVSATDQ--CINVIASFLKEGKCTERNIQCNILIGTDGAGSTVR 240 (716)
Q Consensus 196 ~v~~i~~~~~--gv~v~v~~~~~g~~~~~~i~ad~VVgADG~~S~VR 240 (716)
+|++++.+++ .+++++....+|+ ..++.+|+||.|+|.+|.-+
T Consensus 125 ~V~~v~~~~~~~~~~V~~~~~~~g~--~~~~~~d~VVvAtG~~s~p~ 169 (464)
T 2xve_A 125 AVRHVEFNEDSQTFTVTVQDHTTDT--IYSEEFDYVVCCTGHFSTPY 169 (464)
T ss_dssp EEEEEEEETTTTEEEEEEEETTTTE--EEEEEESEEEECCCSSSSBC
T ss_pred EEEEEEEcCCCCcEEEEEEEcCCCc--eEEEEcCEEEECCCCCCCCc
Confidence 9999998766 6677765322342 35789999999999876544
No 81
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=98.88 E-value=4.4e-08 Score=113.24 Aligned_cols=64 Identities=13% Similarity=0.033 Sum_probs=48.3
Q ss_pred HHHHHHHHHHHHhcCceeecccccccccccccccceEEeCcEEEEEEecCCeEE-EEEEeccCCceeeEEEEecEEEecC
Q 005056 155 YKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSATDQCIN-VIASFLKEGKCTERNIQCNILIGTD 233 (716)
Q Consensus 155 ~~Le~~L~~~~~~~g~~~~~~~~~~~l~~~~~~~~~v~~g~~v~~i~~~~~gv~-v~v~~~~~g~~~~~~i~ad~VVgAD 233 (716)
..+...|.+.+.+.|+ +|+++++|+++..+++.|. +.+....+|+ ..+|+|+.||.|.
T Consensus 158 ~~l~~~L~~~a~~~gv-------------------~i~~~~~v~~L~~~~g~v~Gv~~~~~~~G~--~~~i~A~~VVlAT 216 (660)
T 2bs2_A 158 HTMLFAVANECLKLGV-------------------SIQDRKEAIALIHQDGKCYGAVVRDLVTGD--IIAYVAKGTLIAT 216 (660)
T ss_dssp HHHHHHHHHHHHHHTC-------------------EEECSEEEEEEEEETTEEEEEEEEETTTCC--EEEEECSEEEECC
T ss_pred HHHHHHHHHHHHhCCC-------------------EEEECcEEEEEEecCCEEEEEEEEECCCCc--EEEEEcCEEEEcc
Confidence 4677888888888887 9999999999987766543 3333223453 4579999999999
Q ss_pred CCChhh
Q 005056 234 GAGSTV 239 (716)
Q Consensus 234 G~~S~V 239 (716)
|..+.+
T Consensus 217 GG~~~~ 222 (660)
T 2bs2_A 217 GGYGRI 222 (660)
T ss_dssp CCCGGG
T ss_pred Ccchhh
Confidence 998864
No 82
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.87 E-value=1.2e-08 Score=113.32 Aligned_cols=152 Identities=17% Similarity=0.246 Sum_probs=85.3
Q ss_pred ccCCEEEECCCHHHHHHHHHHHhCC-----CCEEEECCCCCCCCCCCeeeeChhHH--HHHHhhhchHHHHHhcCCCccc
Q 005056 42 AVVPVLIVGAGPVGLVLSILLTKLG-----IKCSVLEKNKAFSTHPQAHFINNRYA--LVFRKLDGLAEEIERSQPPVDL 114 (716)
Q Consensus 42 ~~~dVlIVGaGpaGLt~Al~Lar~G-----i~v~liEr~~~~~~~p~a~~i~~rtm--eilr~l~Gl~~~l~~~~~~~~~ 114 (716)
..+||+||||||+||++|+.|+++| ++|+||||.+....++.. .+....+ ..++.+ .....|...
T Consensus 29 ~~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g~~~~~-~~~~~~~~~~~~~~l-------~~~~~p~~~ 100 (463)
T 3s5w_A 29 VVHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYRWHGNT-LVSQSELQISFLKDL-------VSLRNPTSP 100 (463)
T ss_dssp CEESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCCSSGGG-CCSSCBCSSCTTSSS-------STTTCTTCT
T ss_pred CcCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCCCcCCC-CCCCCcCCcchhhcc-------ccccCCCCC
Confidence 4579999999999999999999999 999999999865422210 0000000 000000 000000000
Q ss_pred cceeEEeecCCCCceeeccCCCccccccccCCccccccChHHHHHHHHHHHHhcCceeecccccccccccccccceEEeC
Q 005056 115 WRKFIYCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMG 194 (716)
Q Consensus 115 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~l~~~~~~~~~v~~g 194 (716)
+....|... .+.. ..+ ........++..+...|...+.+.+. .++++
T Consensus 101 ~~~~~~l~~-~~~~---------~~~----~~~~~~~~~~~~~~~~l~~~~~~~~~-------------------~i~~~ 147 (463)
T 3s5w_A 101 YSFVNYLHK-HDRL---------VDF----INLGTFYPCRMEFNDYLRWVASHFQE-------------------QSRYG 147 (463)
T ss_dssp TSHHHHHHH-TTCH---------HHH----HHHCCSCCBHHHHHHHHHHHHTTCTT-------------------TEEES
T ss_pred CChhHhhhh-cCce---------eec----ccccCCCCCHHHHHHHHHHHHHHcCC-------------------eEEeC
Confidence 000000000 0000 000 00111234678888888888877765 89999
Q ss_pred cEEEEEEec---CCe--EEEEEEeccCCceeeEEEEecEEEecCCCCh
Q 005056 195 HECVSVSAT---DQC--INVIASFLKEGKCTERNIQCNILIGTDGAGS 237 (716)
Q Consensus 195 ~~v~~i~~~---~~g--v~v~v~~~~~g~~~~~~i~ad~VVgADG~~S 237 (716)
++|++++.+ +.. +++++. ++++.++++++|+||.|+|...
T Consensus 148 ~~V~~i~~~~~~~~~~~~~V~~~---~g~g~~~~~~~d~lVlAtG~~p 192 (463)
T 3s5w_A 148 EEVLRIEPMLSAGQVEALRVISR---NADGEELVRTTRALVVSPGGTP 192 (463)
T ss_dssp EEEEEEEEEEETTEEEEEEEEEE---ETTSCEEEEEESEEEECCCCEE
T ss_pred CEEEEEEEecCCCceEEEEEEEe---cCCCceEEEEeCEEEECCCCCC
Confidence 999999876 333 344444 2222345799999999999743
No 83
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=98.87 E-value=3.7e-08 Score=109.84 Aligned_cols=62 Identities=18% Similarity=0.267 Sum_probs=47.8
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCC--CCEEEECCCCCCCCCC---------------CeeeeChhHHHHHHhhhchHHHH
Q 005056 43 VVPVLIVGAGPVGLVLSILLTKLG--IKCSVLEKNKAFSTHP---------------QAHFINNRYALVFRKLDGLAEEI 105 (716)
Q Consensus 43 ~~dVlIVGaGpaGLt~Al~Lar~G--i~v~liEr~~~~~~~p---------------~a~~i~~rtmeilr~l~Gl~~~l 105 (716)
.+||+|||||++||++|+.|+++| ++|+|+|+++....+. ......+..+++++++ |+.+.+
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~~GG~~~~~~~~g~~~~~g~~~~~~~~~~~~~l~~~l-g~~~~~ 82 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGERLGGKVATYREDGFTIERGPDSYVARKHILTDLIEAI-GLGEKL 82 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSSSBTTCCEECSTTCCEESSCCCEETTSTHHHHHHHHT-TCGGGE
T ss_pred cccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCCCCceeEEEeeCCEEEecCchhhhcccHHHHHHHHHc-CCcceE
Confidence 479999999999999999999999 9999999976542210 0112346788889888 876544
No 84
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=98.86 E-value=9.3e-08 Score=107.27 Aligned_cols=36 Identities=36% Similarity=0.511 Sum_probs=31.0
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCCC
Q 005056 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFS 79 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~~ 79 (716)
.+|+|||||++||++|+.|+++|++|+|+|+++.+.
T Consensus 2 k~VvVIGaG~~GL~aA~~La~~G~~V~VlEa~~~~G 37 (501)
T 4dgk_A 2 KPTTVIGAGFGGLALAIRLQAAGIPVLLLEQRDKPG 37 (501)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEECCC----
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCcEEEEccCCCCC
Confidence 479999999999999999999999999999998763
No 85
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=98.86 E-value=1.2e-08 Score=107.68 Aligned_cols=115 Identities=20% Similarity=0.278 Sum_probs=78.4
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCCCCCCCeeeeChhHHHHHHhhhchHHHHHhcCCCccccceeEE
Q 005056 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIY 120 (716)
Q Consensus 41 ~~~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~~~~p~a~~i~~rtmeilr~l~Gl~~~l~~~~~~~~~~~~~~~ 120 (716)
+..+||+||||||+||++|+.|+++|++|+||||.. + .+. + - ... .
T Consensus 6 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~-~----gg~------------~-~------~~~-~--------- 51 (325)
T 2q7v_A 6 AHDYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKGM-P----GGQ------------I-A------WSE-E--------- 51 (325)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-T----TGG------------G-G------GCS-C---------
T ss_pred cccCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCCC-C----Ccc------------c-c------ccc-c---------
Confidence 456899999999999999999999999999999982 1 110 0 0 000 0
Q ss_pred eecCCCCceeeccCCCccccccccCCccccccChHHHHHHHHHHHHhcCceeecccccccccccccccceEEeCcEEEEE
Q 005056 121 CTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSV 200 (716)
Q Consensus 121 ~~~~~g~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~l~~~~~~~~~v~~g~~v~~i 200 (716)
+... ..+ ...+++..+...|.+.+.+.|+ ++++ .+++++
T Consensus 52 --------~~~~-----~~~--------~~~~~~~~~~~~l~~~~~~~gv-------------------~~~~-~~v~~i 90 (325)
T 2q7v_A 52 --------VENF-----PGF--------PEPIAGMELAQRMHQQAEKFGA-------------------KVEM-DEVQGV 90 (325)
T ss_dssp --------BCCS-----TTC--------SSCBCHHHHHHHHHHHHHHTTC-------------------EEEE-CCEEEE
T ss_pred --------cccC-----CCC--------CCCCCHHHHHHHHHHHHHHcCC-------------------EEEe-eeEEEE
Confidence 0000 000 0123466777888888888877 7777 588888
Q ss_pred Eec--CCe-EEEEEEeccCCceeeEEEEecEEEecCCCCh
Q 005056 201 SAT--DQC-INVIASFLKEGKCTERNIQCNILIGTDGAGS 237 (716)
Q Consensus 201 ~~~--~~g-v~v~v~~~~~g~~~~~~i~ad~VVgADG~~S 237 (716)
+.+ ++. ++++.. +|+ ++++|+||.|+|.++
T Consensus 91 ~~~~~~~~~~~v~~~---~g~----~~~~~~vv~AtG~~~ 123 (325)
T 2q7v_A 91 QHDATSHPYPFTVRG---YNG----EYRAKAVILATGADP 123 (325)
T ss_dssp EECTTSSSCCEEEEE---SSC----EEEEEEEEECCCEEE
T ss_pred EeccCCCceEEEEEC---CCC----EEEeCEEEECcCCCc
Confidence 876 443 555443 443 689999999999865
No 86
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=98.86 E-value=6.8e-09 Score=109.51 Aligned_cols=118 Identities=20% Similarity=0.288 Sum_probs=82.8
Q ss_pred ccCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCCCCCCCeeeeChhHHHHHHhhhchHHHHHhcCCCccccceeEEe
Q 005056 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYC 121 (716)
Q Consensus 42 ~~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~~~~p~a~~i~~rtmeilr~l~Gl~~~l~~~~~~~~~~~~~~~~ 121 (716)
..+||+||||||+||++|+.|+++|++|+|||+.+... |.+... .|..
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~g--------------------G~~~~~----~~~~-------- 53 (332)
T 3lzw_A 6 KVYDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLG--------------------GQLSAL----YPEK-------- 53 (332)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC--------------------HHHHHH----CTTS--------
T ss_pred ccceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCC--------------------ceehhc----CCCc--------
Confidence 34799999999999999999999999999999987531 222110 0110
Q ss_pred ecCCCCceeeccCCCccccccccCCccccccChHHHHHHHHHHHHhcCceeecccccccccccccccceEEeCcEEEEEE
Q 005056 122 TSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVS 201 (716)
Q Consensus 122 ~~~~g~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~l~~~~~~~~~v~~g~~v~~i~ 201 (716)
.+... . . ...++...+...|.+.+.+.++ +++++++|++++
T Consensus 54 ------~~~~~--~---~---------~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~v~~i~ 94 (332)
T 3lzw_A 54 ------YIYDV--A---G---------FPKIRAQELINNLKEQMAKFDQ-------------------TICLEQAVESVE 94 (332)
T ss_dssp ------EECCS--T---T---------CSSEEHHHHHHHHHHHHTTSCC-------------------EEECSCCEEEEE
T ss_pred ------eEecc--C---C---------CCCCCHHHHHHHHHHHHHHhCC-------------------cEEccCEEEEEE
Confidence 00000 0 0 0123456778888888887776 899999999999
Q ss_pred ecCC-eEEEEEEeccCCceeeEEEEecEEEecCCCChh
Q 005056 202 ATDQ-CINVIASFLKEGKCTERNIQCNILIGTDGAGST 238 (716)
Q Consensus 202 ~~~~-gv~v~v~~~~~g~~~~~~i~ad~VVgADG~~S~ 238 (716)
.+++ .+++++. ++ ++.+|+||.|.|.+|.
T Consensus 95 ~~~~~~~~v~~~---~g-----~~~~d~vVlAtG~~~~ 124 (332)
T 3lzw_A 95 KQADGVFKLVTN---EE-----THYSKTVIITAGNGAF 124 (332)
T ss_dssp ECTTSCEEEEES---SE-----EEEEEEEEECCTTSCC
T ss_pred ECCCCcEEEEEC---CC-----EEEeCEEEECCCCCcC
Confidence 8776 5555543 33 3899999999999653
No 87
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=98.86 E-value=5.3e-08 Score=111.48 Aligned_cols=64 Identities=14% Similarity=0.132 Sum_probs=48.4
Q ss_pred HHHHHHHHHHHHhcCceeecccccccccccccccceEEeCcEEEEEEec-CCeEE-EEEEeccCCceeeEEEEecEEEec
Q 005056 155 YKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSAT-DQCIN-VIASFLKEGKCTERNIQCNILIGT 232 (716)
Q Consensus 155 ~~Le~~L~~~~~~~g~~~~~~~~~~~l~~~~~~~~~v~~g~~v~~i~~~-~~gv~-v~v~~~~~g~~~~~~i~ad~VVgA 232 (716)
..+...|.+.+.+.|+ +|+++++|+++..+ ++.|+ +.+.+..+|+ ..+|+|+.||.|
T Consensus 143 ~~l~~~L~~~~~~~gv-------------------~i~~~~~v~~L~~~~~g~v~Gv~~~~~~~g~--~~~i~A~~VVlA 201 (588)
T 2wdq_A 143 HALLHTLYQQNLKNHT-------------------TIFSEWYALDLVKNQDGAVVGCTALCIETGE--VVYFKARATVLA 201 (588)
T ss_dssp HHHHHHHHHHHHHTTC-------------------EEEETEEEEEEEECTTSCEEEEEEEETTTCC--EEEEEEEEEEEC
T ss_pred HHHHHHHHHHHHhCCC-------------------EEEeCcEEEEEEECCCCEEEEEEEEEcCCCe--EEEEEcCEEEEC
Confidence 5678888888888877 99999999999986 45443 3343323443 457999999999
Q ss_pred CCCChhh
Q 005056 233 DGAGSTV 239 (716)
Q Consensus 233 DG~~S~V 239 (716)
+|..|.+
T Consensus 202 tGg~~~~ 208 (588)
T 2wdq_A 202 TGGAGRI 208 (588)
T ss_dssp CCCCGGG
T ss_pred CCCCccc
Confidence 9998864
No 88
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=98.85 E-value=1.4e-07 Score=106.57 Aligned_cols=37 Identities=30% Similarity=0.475 Sum_probs=34.3
Q ss_pred ccCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCC
Q 005056 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (716)
Q Consensus 42 ~~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~ 78 (716)
..+||+|||||++||++|..|+++|++|+|+|+++.+
T Consensus 3 ~~~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~ 39 (520)
T 1s3e_A 3 NKCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRV 39 (520)
T ss_dssp CBCSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCC
Confidence 3579999999999999999999999999999998765
No 89
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.85 E-value=1e-08 Score=107.61 Aligned_cols=112 Identities=16% Similarity=0.210 Sum_probs=77.9
Q ss_pred ccCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCCCCCCCeeeeChhHHHHHHhhhchHHHHHhcCCCccccceeEEe
Q 005056 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYC 121 (716)
Q Consensus 42 ~~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~~~~p~a~~i~~rtmeilr~l~Gl~~~l~~~~~~~~~~~~~~~~ 121 (716)
+.+||+||||||+||++|+.|+++|++|+||||+ + . |.... . +.
T Consensus 14 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~--~----g----------------g~~~~----~-~~--------- 57 (323)
T 3f8d_A 14 EKFDVIIVGLGPAAYGAALYSARYMLKTLVIGET--P----G----------------GQLTE----A-GI--------- 57 (323)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS--T----T----------------GGGGG----C-CE---------
T ss_pred CccCEEEECccHHHHHHHHHHHHCCCcEEEEecc--C----C----------------Ceecc----c-cc---------
Confidence 3589999999999999999999999999999997 1 0 11000 0 00
Q ss_pred ecCCCCceeeccCCCccccccccCCccccccChHHHHHHHHHHHHhcCceeecccccccccccccccceEEeCcEEEEEE
Q 005056 122 TSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVS 201 (716)
Q Consensus 122 ~~~~g~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~l~~~~~~~~~v~~g~~v~~i~ 201 (716)
.... |. ...+....+...|.+.+.+.++ ++++ ++|++++
T Consensus 58 -------~~~~-------------~~-~~~~~~~~~~~~~~~~~~~~~v-------------------~~~~-~~v~~i~ 96 (323)
T 3f8d_A 58 -------VDDY-------------LG-LIEIQASDMIKVFNKHIEKYEV-------------------PVLL-DIVEKIE 96 (323)
T ss_dssp -------ECCS-------------TT-STTEEHHHHHHHHHHHHHTTTC-------------------CEEE-SCEEEEE
T ss_pred -------cccc-------------CC-CCCCCHHHHHHHHHHHHHHcCC-------------------EEEE-EEEEEEE
Confidence 0000 00 0013456777778888888776 7778 8999999
Q ss_pred ecCCeEEEEEEeccCCceeeEEEEecEEEecCCCCh
Q 005056 202 ATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGS 237 (716)
Q Consensus 202 ~~~~gv~v~v~~~~~g~~~~~~i~ad~VVgADG~~S 237 (716)
.+++.++++.. ++. ++.+|+||.|.|...
T Consensus 97 ~~~~~~~v~~~---~g~----~~~~d~lvlAtG~~~ 125 (323)
T 3f8d_A 97 NRGDEFVVKTK---RKG----EFKADSVILGIGVKR 125 (323)
T ss_dssp EC--CEEEEES---SSC----EEEEEEEEECCCCEE
T ss_pred ecCCEEEEEEC---CCC----EEEcCEEEECcCCCC
Confidence 88777766553 343 689999999999874
No 90
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=98.85 E-value=3.7e-08 Score=112.51 Aligned_cols=162 Identities=12% Similarity=0.125 Sum_probs=93.2
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCCCCCC----Ceeee-Ch---------hHH-HHHHhh-------
Q 005056 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHP----QAHFI-NN---------RYA-LVFRKL------- 98 (716)
Q Consensus 41 ~~~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~~~~p----~a~~i-~~---------rtm-eilr~l------- 98 (716)
...+||+|||||++||++|+.|+++|.+|+||||.+.+.... .+... +. .+. ++++.+
T Consensus 124 ~~~~~v~viG~G~aG~~aa~~~~~~g~~v~~~e~~~~~~~~~~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~~ 203 (572)
T 1d4d_A 124 KETTDVVIIGSGGAGLAAAVSARDAGAKVILLEKEPIPGGNTKLAAGGMNAAETKPQAKLGIEDKKQIMIDDTMKGGRNI 203 (572)
T ss_dssp CEECSEEEECCSHHHHHHHHHHHSSSCCEEEECSSSSSCTTGGGCCSCEECCSSSTTGGGTCCCCTHHHHHHHHHHTTTC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCcchhhhCCeeEccCCHHHHHhCCCCCHHHHHHHHHHhcCCC
Confidence 346899999999999999999999999999999998653221 11100 00 000 111100
Q ss_pred -------------hchHHHHHhcCCCccccceeEEeecCCCCceeeccCCCccccccccCCccccccChHHHHHHHHHHH
Q 005056 99 -------------DGLAEEIERSQPPVDLWRKFIYCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQL 165 (716)
Q Consensus 99 -------------~Gl~~~l~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~ 165 (716)
....+.+.+.+.+... .....|... .....+. ........+...|.+.+
T Consensus 204 ~~~~~v~~~~~~~~~~i~~l~~~Gv~~~~------~~~~gg~~~-----------~r~~~~~-~~~~~g~~l~~~L~~~~ 265 (572)
T 1d4d_A 204 NDPELVKVLANNSSDSIDWLTSMGADMTD------VGRMGGASV-----------NRSHRPT-GGAGVGAHVAQVLWDNA 265 (572)
T ss_dssp SCHHHHHHHHHTHHHHHHHHHHHTCCCCE------EECCTTCSS-----------CCEEEST-TTCCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHccHHHHHHHHhcCCcccc------ccccCCCcC-----------CeeEecC-CCCCCHHHHHHHHHHHH
Confidence 0011112222222110 000011000 0000010 01123567888899999
Q ss_pred HhcCceeecccccccccccccccceEEeCcEEEEEEecC-CeEE-EEEEeccCCceeeEEEEecEEEecCCCChhhhhh
Q 005056 166 EKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSATD-QCIN-VIASFLKEGKCTERNIQCNILIGTDGAGSTVRKL 242 (716)
Q Consensus 166 ~~~g~~~~~~~~~~~l~~~~~~~~~v~~g~~v~~i~~~~-~gv~-v~v~~~~~g~~~~~~i~ad~VVgADG~~S~VR~~ 242 (716)
.+.|+ +|+++++|+++..++ +.|+ +.+.. .+|+ ..+|+||.||.|+|..|..++.
T Consensus 266 ~~~gv-------------------~i~~~t~v~~l~~~~~g~v~GV~~~~-~~G~--~~~i~A~~VVlAtGg~~~~~~~ 322 (572)
T 1d4d_A 266 VKRGT-------------------DIRLNSRVVRILEDASGKVTGVLVKG-EYTG--YYVIKADAVVIAAGGFAKNNER 322 (572)
T ss_dssp HHTTC-------------------EEESSEEEEEEEEC--CCEEEEEEEE-TTTE--EEEEECSEEEECCCCCTTCHHH
T ss_pred HHcCC-------------------eEEecCEEEEEEECCCCeEEEEEEEe-CCCc--EEEEEcCEEEEeCCCCccCHHH
Confidence 98887 999999999998776 5543 44432 2343 4579999999999999876543
No 91
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.84 E-value=1.2e-08 Score=106.95 Aligned_cols=114 Identities=21% Similarity=0.338 Sum_probs=79.7
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCC-CEEEECCCCCCCCCCCeeeeChhHHHHHHhhhchHHHHHhcCCCccccceeEEee
Q 005056 44 VPVLIVGAGPVGLVLSILLTKLGI-KCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCT 122 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar~Gi-~v~liEr~~~~~~~p~a~~i~~rtmeilr~l~Gl~~~l~~~~~~~~~~~~~~~~~ 122 (716)
+||+||||||+|+++|+.|+++|+ +|+||||.. +.+...+ .. ..
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~~-----~gg~~~~-------------------~~-~~---------- 46 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRGGVKNAVLFEKGM-----PGGQITG-------------------SS-EI---------- 46 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCSSEEEECSSS-----TTCGGGG-------------------CS-CB----------
T ss_pred ceEEEECccHHHHHHHHHHHHCCCCcEEEEcCCC-----CCccccc-------------------cc-cc----------
Confidence 689999999999999999999999 999999952 1110000 00 00
Q ss_pred cCCCCceeeccCCCccccccccCCccccccChHHHHHHHHHHHHhcCceeecccccccccccccccceEEeCcEEEEEEe
Q 005056 123 SVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSA 202 (716)
Q Consensus 123 ~~~g~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~l~~~~~~~~~v~~g~~v~~i~~ 202 (716)
... |.....+++..+...|.+.+.+.++ ++++ +++++++.
T Consensus 47 -------~~~-------------~~~~~~~~~~~~~~~l~~~~~~~~v-------------------~~~~-~~v~~i~~ 86 (311)
T 2q0l_A 47 -------ENY-------------PGVKEVVSGLDFMQPWQEQCFRFGL-------------------KHEM-TAVQRVSK 86 (311)
T ss_dssp -------CCS-------------TTCCSCBCHHHHHHHHHHHHHTTSC-------------------EEEC-SCEEEEEE
T ss_pred -------ccC-------------CCCcccCCHHHHHHHHHHHHHHcCC-------------------EEEE-EEEEEEEE
Confidence 000 0001134567788888888887776 7777 78999988
Q ss_pred cCCeEEEEEEeccCCceeeEEEEecEEEecCCCChhh
Q 005056 203 TDQCINVIASFLKEGKCTERNIQCNILIGTDGAGSTV 239 (716)
Q Consensus 203 ~~~gv~v~v~~~~~g~~~~~~i~ad~VVgADG~~S~V 239 (716)
+++.+++++. +++ ++++|+||.|+|.++.+
T Consensus 87 ~~~~~~v~~~---~g~----~~~~~~vv~AtG~~~~~ 116 (311)
T 2q0l_A 87 KDSHFVILAE---DGK----TFEAKSVIIATGGSPKR 116 (311)
T ss_dssp ETTEEEEEET---TSC----EEEEEEEEECCCEEECC
T ss_pred cCCEEEEEEc---CCC----EEECCEEEECCCCCCCC
Confidence 8777666543 443 68999999999987644
No 92
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=98.81 E-value=1.6e-08 Score=114.72 Aligned_cols=140 Identities=16% Similarity=0.227 Sum_probs=86.7
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCCCCCCCeeeeChhHHHHHHhhhchHHHHHhcCCCccccceeEE
Q 005056 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIY 120 (716)
Q Consensus 41 ~~~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~~~~p~a~~i~~rtmeilr~l~Gl~~~l~~~~~~~~~~~~~~~ 120 (716)
+.++||+|||||++|+++|+.|++.|++|+||||++.... +.. ....+|+. ...+.....
T Consensus 19 ~~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG----------tw~-~~~ypg~~-----~dv~s~~y~---- 78 (549)
T 4ap3_A 19 TTSYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVGG----------VWY-WNRYPGAR-----CDVESIDYS---- 78 (549)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCT----------HHH-HCCCTTCB-----CSSCTTTSS----
T ss_pred CCCCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCCC----------ccc-cCCCCCce-----eCCCchhcc----
Confidence 4568999999999999999999999999999999875420 000 00011110 000100000
Q ss_pred eecCCCCceeeccCCCccccccccCCccccccChHHHHHHHHHHHHhcCceeecccccccccccccccceEEeCcEEEEE
Q 005056 121 CTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSV 200 (716)
Q Consensus 121 ~~~~~g~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~l~~~~~~~~~v~~g~~v~~i 200 (716)
... .. .... .........++..+...|.+.+++.++. ..++++++|+++
T Consensus 79 -----------~~f-~~-~~~~-~~~~~~~~~~~~ei~~yl~~~~~~~g~~-----------------~~i~~~~~V~~i 127 (549)
T 4ap3_A 79 -----------YSF-SP-ELEQ-EWNWSEKYATQPEILAYLEHVADRFDLR-----------------RDIRFDTRVTSA 127 (549)
T ss_dssp -----------CCS-CH-HHHH-HCCCSSSSCBHHHHHHHHHHHHHHTTCG-----------------GGEECSCCEEEE
T ss_pred -----------ccc-cc-cccc-CCCCccCCCCHHHHHHHHHHHHHHcCCC-----------------ccEEECCEEEEE
Confidence 000 00 0000 0001112456888888898888887751 278999999999
Q ss_pred EecCC--eEEEEEEeccCCceeeEEEEecEEEecCCCChh
Q 005056 201 SATDQ--CINVIASFLKEGKCTERNIQCNILIGTDGAGST 238 (716)
Q Consensus 201 ~~~~~--gv~v~v~~~~~g~~~~~~i~ad~VVgADG~~S~ 238 (716)
+.+++ .+++++. +|+ ++++|+||.|+|..|.
T Consensus 128 ~~~~~~~~w~V~~~---~G~----~i~ad~lV~AtG~~s~ 160 (549)
T 4ap3_A 128 VLDEEGLRWTVRTD---RGD----EVSARFLVVAAGPLSN 160 (549)
T ss_dssp EEETTTTEEEEEET---TCC----EEEEEEEEECCCSEEE
T ss_pred EEcCCCCEEEEEEC---CCC----EEEeCEEEECcCCCCC
Confidence 88776 4455442 453 6899999999998764
No 93
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=98.81 E-value=2.9e-08 Score=114.70 Aligned_cols=172 Identities=15% Similarity=0.081 Sum_probs=94.6
Q ss_pred CCccCCEEEECCCHHHHHHHHHHHhC------CCCEEEECCCCCCCCCCC--e-eeeC----hhHHHH------------
Q 005056 40 NEAVVPVLIVGAGPVGLVLSILLTKL------GIKCSVLEKNKAFSTHPQ--A-HFIN----NRYALV------------ 94 (716)
Q Consensus 40 ~~~~~dVlIVGaGpaGLt~Al~Lar~------Gi~v~liEr~~~~~~~p~--a-~~i~----~rtmei------------ 94 (716)
...++||||||||++||++|+.|+++ |.+|+||||......+.. + .+++ ..+.+.
T Consensus 19 ~~~~~DVvVVG~G~AGL~AAl~aa~~~~~~~pG~~V~vleK~~~~~s~s~AqG~~gi~a~l~~ds~e~~~~~~~~~~~gl 98 (662)
T 3gyx_A 19 VEHSVDLLMVGGGMGNCGAAFEAVRWADKYAPEAKILLVDKASLERSGAVAQGLSAINTYLGDNNADDYVRMVRTDLMGL 98 (662)
T ss_dssp EEEECSEEEECCSHHHHHHHHHHHHHHHHHCTTCCEEEECSSCTTTCSTTTTCEEEECCCCTTSCHHHHHHHHHHHTTTC
T ss_pred ceEEcCEEEECCCHHHHHHHHHHHhhccccCCCCcEEEEEecCCCCCcccccCcchheeecCCCCHHHHHHHHHHhcCCC
Confidence 35579999999999999999999998 999999999865432211 1 1221 111111
Q ss_pred --------HHh-hhchHHHHHhcCCCccccceeEEeecCCCCcee-----eccCCCccccccccCCccccccChHHHHHH
Q 005056 95 --------FRK-LDGLAEEIERSQPPVDLWRKFIYCTSVTGPILG-----SVDHMQPQDFEKVVSPVSVAHFSQYKLNKL 160 (716)
Q Consensus 95 --------lr~-l~Gl~~~l~~~~~~~~~~~~~~~~~~~~g~~l~-----~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~ 160 (716)
+-+ .+...+.+.+.+.+.... ...|.... .+...................+....+.+.
T Consensus 99 ~d~~~v~~l~~~a~~~i~~L~~~Gv~f~~~-------~~~G~~~~g~~~~~fg~~~~~gg~~~~r~~~~~~~~G~~i~~~ 171 (662)
T 3gyx_A 99 VREDLIYDLGRHVDDSVHLFEEWGLPVWIK-------DEHGHNLDGAQAKAAGKSLRNGDKPVRSGRWQIMINGESYKVI 171 (662)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHTCCBCEE-------CSSSCEECHHHHHHHTCCTTTTCCBCCSSTTCEEEEETSHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHcCCCceec-------CCCCccccchhhhccccccccCccccccceecccCCHHHHHHH
Confidence 100 011123334444443210 00111100 000000000000000000112345568888
Q ss_pred HHHHHHhc--CceeecccccccccccccccceEEeCcEEEEEEecCC---eEE-EEEEeccCCceeeEEEEecEEEecCC
Q 005056 161 LLKQLEKL--NFKICTSEGTEGLHNHLLQGREILMGHECVSVSATDQ---CIN-VIASFLKEGKCTERNIQCNILIGTDG 234 (716)
Q Consensus 161 L~~~~~~~--g~~~~~~~~~~~l~~~~~~~~~v~~g~~v~~i~~~~~---gv~-v~v~~~~~g~~~~~~i~ad~VVgADG 234 (716)
|.+.+.+. |+ +|+.++.++++..+++ .|. +.+....+|+ ..+|+|+.||.|.|
T Consensus 172 L~~~a~~~~~gV-------------------~i~~~~~v~dLi~~~~~~g~v~Gv~~~~~~~g~--~~~i~Ak~VVLATG 230 (662)
T 3gyx_A 172 VAEAAKNALGQD-------------------RIIERIFIVKLLLDKNTPNRIAGAVGFNLRANE--VHIFKANAMVVACG 230 (662)
T ss_dssp HHHHHHHHHCTT-------------------TEECSEEECCCEECSSSTTBEEEEEEEESSSSC--EEEEECSEEEECCC
T ss_pred HHHHHHhcCCCc-------------------EEEEceEEEEEEEeCCccceEEEEEEEEcCCCc--EEEEEeCEEEECCC
Confidence 88888887 66 8999999999887766 443 2222223443 46799999999999
Q ss_pred CChhh
Q 005056 235 AGSTV 239 (716)
Q Consensus 235 ~~S~V 239 (716)
..+.+
T Consensus 231 G~g~~ 235 (662)
T 3gyx_A 231 GAVNV 235 (662)
T ss_dssp CBCSS
T ss_pred ccccc
Confidence 98753
No 94
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=98.80 E-value=1.1e-07 Score=109.08 Aligned_cols=169 Identities=15% Similarity=0.132 Sum_probs=93.4
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCCCCCC----Ceee--eC---hhHHH-HHHh-h-----------
Q 005056 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHP----QAHF--IN---NRYAL-VFRK-L----------- 98 (716)
Q Consensus 41 ~~~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~~~~p----~a~~--i~---~rtme-ilr~-l----------- 98 (716)
+.++||||||||++||++|+.|+++|.+|+||||......+. .+.. ++ ..+.+ .+.. +
T Consensus 16 ~~~~DVvVVG~G~AGl~AAl~aa~~G~~V~vlEK~~~~~g~s~~a~GGi~a~~~~~~~ds~~~~~~dtl~~g~~l~d~~~ 95 (621)
T 2h88_A 16 DHEFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSHTVAAQGGINAALGNMEDDNWRWHFYDTVKGSDWLGDQDA 95 (621)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGGGSGGGGCCSCEECCCCSSSCCCHHHHHHHHHHHTTTCSCHHH
T ss_pred cccCCEEEECccHHHHHHHHHHHHCCCcEEEEeccCCCCCCchhhCCCcEecCCCCCCCCHHHHHHHHHHhcCCCCCHHH
Confidence 345899999999999999999999999999999986432211 1111 11 11111 1110 0
Q ss_pred --------hchHHHHHhcCCCccccceeEEeecCCCCceeeccCCCccccccccCCc-cccc---cChHHHHHHHHHHHH
Q 005056 99 --------DGLAEEIERSQPPVDLWRKFIYCTSVTGPILGSVDHMQPQDFEKVVSPV-SVAH---FSQYKLNKLLLKQLE 166 (716)
Q Consensus 99 --------~Gl~~~l~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~p~-~~~~---i~q~~Le~~L~~~~~ 166 (716)
+...+.+.+.+.+.... ..|.............+.. ..+. ..++ .....+...|.+.+.
T Consensus 96 v~~l~~~s~~~i~~L~~~Gv~f~~~--------~~g~~~~~~~gg~s~~~g~-~~~~~R~~~~~d~tG~~l~~~L~~~~~ 166 (621)
T 2h88_A 96 IHYMTEQAPAAVIELENYGMPFSRT--------EEGKIYQRAFGGQSLQFGK-GGQAHRCCCVADRTGHSLLHTLYGRSL 166 (621)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCCBC--------TTSSBCEECCTTCBSTTTT-SCBCCCEECSTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHcCCCcccC--------CCCceeccccCcccccccC-CCcceeEEEecCCCHHHHHHHHHHHHH
Confidence 01122233334332110 0111100000000000000 0000 0011 123477888888888
Q ss_pred hcCceeecccccccccccccccceEEeCcEEEEEEecCCeEE-EEEEeccCCceeeEEEEecEEEecCCCChhh
Q 005056 167 KLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSATDQCIN-VIASFLKEGKCTERNIQCNILIGTDGAGSTV 239 (716)
Q Consensus 167 ~~g~~~~~~~~~~~l~~~~~~~~~v~~g~~v~~i~~~~~gv~-v~v~~~~~g~~~~~~i~ad~VVgADG~~S~V 239 (716)
+.|+ +|+++++++++..+++.|. +.+....+|+ ..+|+|+.||.|+|+.|.+
T Consensus 167 ~~gv-------------------~i~~~~~v~~Li~~~g~v~Gv~~~~~~~G~--~~~i~A~~VVlATGG~~~~ 219 (621)
T 2h88_A 167 RYDT-------------------SYFVEYFALDLLMENGECRGVIALCIEDGT--IHRFRAKNTVIATGGYGRT 219 (621)
T ss_dssp TSCC-------------------EEEETEEEEEEEEETTEEEEEEEEETTTCC--EEEEEEEEEEECCCCCGGG
T ss_pred hCCC-------------------EEEEceEEEEEEEECCEEEEEEEEEcCCCc--EEEEEcCeEEECCCccccc
Confidence 8776 9999999999988766554 3333323453 4579999999999999865
No 95
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=98.80 E-value=2.2e-08 Score=113.61 Aligned_cols=141 Identities=13% Similarity=0.186 Sum_probs=85.8
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCCCCCCCeeeeChhHHHHHHhhhchHHHHHhcCCCccccceeEE
Q 005056 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIY 120 (716)
Q Consensus 41 ~~~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~~~~p~a~~i~~rtmeilr~l~Gl~~~l~~~~~~~~~~~~~~~ 120 (716)
+.++||+|||||++|+++|+.|++.|++|+||||++.... +.. ....+|+ ..+...
T Consensus 7 ~~~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GG----------tw~-~~~yPg~---------~~d~~~---- 62 (545)
T 3uox_A 7 SPALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGG----------TWY-WNRYPGC---------RLDTES---- 62 (545)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCT----------HHH-HCCCTTC---------BCSSCH----
T ss_pred CCCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCC----------ccc-cCCCCce---------eecCch----
Confidence 4568999999999999999999999999999999875421 000 0000110 000000
Q ss_pred eecCCCCceeeccCCCccccccccCCccccccChHHHHHHHHHHHHhcCceeecccccccccccccccceEEeCcEEEEE
Q 005056 121 CTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSV 200 (716)
Q Consensus 121 ~~~~~g~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~l~~~~~~~~~v~~g~~v~~i 200 (716)
....... .+..+. .........++..+...|.+.+++.++. ..++++++|+++
T Consensus 63 -------~~y~~~f-~~~~~~--~~~~~~~~~~~~ei~~yl~~~~~~~~l~-----------------~~i~~~~~V~~~ 115 (545)
T 3uox_A 63 -------YAYGYFA-LKGIIP--EWEWSENFASQPEMLRYVNRAADAMDVR-----------------KHYRFNTRVTAA 115 (545)
T ss_dssp -------HHHCHHH-HTTSST--TCCCSBSSCBHHHHHHHHHHHHHHHTCG-----------------GGEECSCCEEEE
T ss_pred -------hhccccc-Cccccc--CCCccccCCCHHHHHHHHHHHHHHcCCc-----------------CcEEECCEEEEE
Confidence 0000000 000000 0000112346788888888888887651 278999999999
Q ss_pred EecCC--eEEEEEEeccCCceeeEEEEecEEEecCCCChhh
Q 005056 201 SATDQ--CINVIASFLKEGKCTERNIQCNILIGTDGAGSTV 239 (716)
Q Consensus 201 ~~~~~--gv~v~v~~~~~g~~~~~~i~ad~VVgADG~~S~V 239 (716)
+.+++ .+++++. +|+ ++++|+||.|+|..|.-
T Consensus 116 ~~~~~~~~w~V~~~---~G~----~~~ad~lV~AtG~~s~p 149 (545)
T 3uox_A 116 RYVENDRLWEVTLD---NEE----VVTCRFLISATGPLSAS 149 (545)
T ss_dssp EEEGGGTEEEEEET---TTE----EEEEEEEEECCCSCBC-
T ss_pred EEeCCCCEEEEEEC---CCC----EEEeCEEEECcCCCCCC
Confidence 87665 4444442 453 78999999999987643
No 96
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=98.79 E-value=3e-08 Score=102.72 Aligned_cols=112 Identities=13% Similarity=0.094 Sum_probs=77.2
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCCCCCCCeeeeChhHHHHHHhhhchHHHHHhcCCCccccceeEEeec
Q 005056 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCTS 123 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~~~~p~a~~i~~rtmeilr~l~Gl~~~l~~~~~~~~~~~~~~~~~~ 123 (716)
+||+||||||+||++|+.|+++|++|+||||.+.... + +...
T Consensus 3 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~~~-----------------~------------~~~~--------- 44 (297)
T 3fbs_A 3 FDVIIIGGSYAGLSAALQLGRARKNILLVDAGERRNR-----------------F------------ASHS--------- 44 (297)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCCGGG-----------------G------------CSCC---------
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCcccc-----------------c------------chhh---------
Confidence 7999999999999999999999999999999751100 0 0000
Q ss_pred CCCCceeeccCCCccccccccCCccccccChHHHHHHHHHHHHhcCceeecccccccccccccccceEEeCcEEEEEEec
Q 005056 124 VTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSAT 203 (716)
Q Consensus 124 ~~g~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~l~~~~~~~~~v~~g~~v~~i~~~ 203 (716)
. .+ +. ...++...+...|.+.+.+.+. ++++ ..+|++++.+
T Consensus 45 -~-------------~~-----~~-~~~~~~~~~~~~~~~~~~~~~~------------------v~~~-~~~v~~i~~~ 85 (297)
T 3fbs_A 45 -H-------------GF-----LG-QDGKAPGEIIAEARRQIERYPT------------------IHWV-EGRVTDAKGS 85 (297)
T ss_dssp -C-------------SS-----TT-CTTCCHHHHHHHHHHHHTTCTT------------------EEEE-ESCEEEEEEE
T ss_pred -c-------------CC-----cC-CCCCCHHHHHHHHHHHHHhcCC------------------eEEE-EeEEEEEEEc
Confidence 0 00 00 0123456677777777776632 2554 4589999988
Q ss_pred CCeEEEEEEeccCCceeeEEEEecEEEecCCCChhh
Q 005056 204 DQCINVIASFLKEGKCTERNIQCNILIGTDGAGSTV 239 (716)
Q Consensus 204 ~~gv~v~v~~~~~g~~~~~~i~ad~VVgADG~~S~V 239 (716)
++++++++. +++ ++++|+||.|.|.++..
T Consensus 86 ~~~~~v~~~---~g~----~~~~d~vviAtG~~~~~ 114 (297)
T 3fbs_A 86 FGEFIVEID---GGR----RETAGRLILAMGVTDEL 114 (297)
T ss_dssp TTEEEEEET---TSC----EEEEEEEEECCCCEEEC
T ss_pred CCeEEEEEC---CCC----EEEcCEEEECCCCCCCC
Confidence 888766653 443 68999999999997643
No 97
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=98.77 E-value=2.3e-07 Score=103.81 Aligned_cols=40 Identities=33% Similarity=0.497 Sum_probs=36.1
Q ss_pred CCCccCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCC
Q 005056 39 SNEAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (716)
Q Consensus 39 ~~~~~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~ 78 (716)
+.+.+.||+|||||++||++|+.|+++|++|+|+|+++.+
T Consensus 7 ~~~~~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~ 46 (489)
T 2jae_A 7 KVKGSHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRP 46 (489)
T ss_dssp CCCSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred cccCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCC
Confidence 3445689999999999999999999999999999999765
No 98
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=98.75 E-value=3.2e-08 Score=105.05 Aligned_cols=115 Identities=17% Similarity=0.244 Sum_probs=76.7
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCCCCCCCeeeeChhHHHHHHhhhchHHHHHhcCCCccccceeEE
Q 005056 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIY 120 (716)
Q Consensus 41 ~~~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~~~~p~a~~i~~rtmeilr~l~Gl~~~l~~~~~~~~~~~~~~~ 120 (716)
+..+||+||||||+|+++|+.|+++|++|+|||+.. +.+. + . ....
T Consensus 12 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~-----~gg~------------~-------~-~~~~--------- 57 (335)
T 2a87_A 12 HPVRDVIVIGSGPAGYTAALYAARAQLAPLVFEGTS-----FGGA------------L-------M-TTTD--------- 57 (335)
T ss_dssp CCCEEEEEECCHHHHHHHHHHHHHTTCCCEEECCSS-----CSCG------------G-------G-SCSC---------
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEecCC-----CCCc------------e-------e-ccch---------
Confidence 456899999999999999999999999999999752 1110 0 0 0000
Q ss_pred eecCCCCceeeccCCCccccccccCCccccccChHHHHHHHHHHHHhcCceeecccccccccccccccceEEeCcEEEEE
Q 005056 121 CTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSV 200 (716)
Q Consensus 121 ~~~~~g~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~l~~~~~~~~~v~~g~~v~~i 200 (716)
.... |.....+....+...|.+.+.+.++ ++++++ ++++
T Consensus 58 --------~~~~-------------~~~~~~~~~~~~~~~l~~~~~~~~v-------------------~~~~~~-v~~i 96 (335)
T 2a87_A 58 --------VENY-------------PGFRNGITGPELMDEMREQALRFGA-------------------DLRMED-VESV 96 (335)
T ss_dssp --------BCCS-------------TTCTTCBCHHHHHHHHHHHHHHTTC-------------------EEECCC-EEEE
T ss_pred --------hhhc-------------CCCCCCCCHHHHHHHHHHHHHHcCC-------------------EEEEee-EEEE
Confidence 0000 0000123456677777777777776 888887 8888
Q ss_pred EecCCeEEE-EEEeccCCceeeEEEEecEEEecCCCChh
Q 005056 201 SATDQCINV-IASFLKEGKCTERNIQCNILIGTDGAGST 238 (716)
Q Consensus 201 ~~~~~gv~v-~v~~~~~g~~~~~~i~ad~VVgADG~~S~ 238 (716)
+. ++.+++ ++ .++. ++.+|+||.|+|.++.
T Consensus 97 ~~-~~~~~v~~~---~~g~----~~~~d~lviAtG~~~~ 127 (335)
T 2a87_A 97 SL-HGPLKSVVT---ADGQ----THRARAVILAMGAAAR 127 (335)
T ss_dssp EC-SSSSEEEEE---TTSC----EEEEEEEEECCCEEEC
T ss_pred Ee-CCcEEEEEe---CCCC----EEEeCEEEECCCCCcc
Confidence 77 455555 33 2443 6899999999998653
No 99
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=98.75 E-value=8.2e-08 Score=107.04 Aligned_cols=153 Identities=14% Similarity=0.151 Sum_probs=86.3
Q ss_pred CEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCCCCCC---Cee--eeCh---------------------hHHHHHHh-
Q 005056 45 PVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHP---QAH--FINN---------------------RYALVFRK- 97 (716)
Q Consensus 45 dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~~~~p---~a~--~i~~---------------------rtmeilr~- 97 (716)
||||||||++||++|+.|++.|.+|+||||........ .+. .+++ ..++.+-+
T Consensus 1 DVvVIG~G~AGl~aA~~la~~G~~V~viek~~~~g~s~~a~Ggi~~~~~~~d~~~~~~~d~l~~g~~~~d~~~v~~~~~~ 80 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRAGKKVTLISKRIDGGSTPIAKGGVAASVGSDDSPELHAQDTIRVGDGLCDVKTVNYVTSE 80 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSTTCSSGGGCCSCEECCCSTTCCHHHHHHHHHHHHTTCSCHHHHHHHHHH
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCchHHHHhCCeEEeCCCCCCHHHHHHHHHHhcCCcCCHHHHHHHHHH
Confidence 79999999999999999999999999999982111100 011 1111 11111100
Q ss_pred hhchHHHHHhcCCCccccceeEEeecCCCCceeeccCCCccccccccCCccccccChHHHHHHHHHHHHhcCceeecccc
Q 005056 98 LDGLAEEIERSQPPVDLWRKFIYCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEG 177 (716)
Q Consensus 98 l~Gl~~~l~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~ 177 (716)
.+...+.+.+.+.+.+.. .....+. .+..... ........+...|.+.+++.|+
T Consensus 81 ~~~~i~~l~~~Gv~~~~~-----~~~~~g~-----------~~~r~~~---~~d~~g~~l~~~L~~~~~~~gv------- 134 (472)
T 2e5v_A 81 AKNVIETFESWGFEFEED-----LRLEGGH-----------TKRRVLH---RTDETGREIFNFLLKLAREEGI------- 134 (472)
T ss_dssp HHHHHHHHHHTTCCCCSS-----CBCCTTC-----------SSCCEEC---SSSCHHHHHHHHHHHHHHHTTC-------
T ss_pred HHHHHHHHHHcCCCCCcc-----cccccCc-----------CcCcEEE---eCCCCHHHHHHHHHHHHHhCCC-------
Confidence 001223333334332110 0000000 0000000 0112345677888888877776
Q ss_pred cccccccccccceEEeCcEEEEEEecCCeEE-EEEEeccCCceeeEEEEecEEEecCCCChhhhhh
Q 005056 178 TEGLHNHLLQGREILMGHECVSVSATDQCIN-VIASFLKEGKCTERNIQCNILIGTDGAGSTVRKL 242 (716)
Q Consensus 178 ~~~l~~~~~~~~~v~~g~~v~~i~~~~~gv~-v~v~~~~~g~~~~~~i~ad~VVgADG~~S~VR~~ 242 (716)
++++++++ ++..+++.+. +.+. ..+| ++++|.||.|+|+.|.++..
T Consensus 135 ------------~i~~~~~v-~l~~~~~~v~Gv~v~-~~~g-----~~~a~~VVlAtGg~~~~~~~ 181 (472)
T 2e5v_A 135 ------------PIIEDRLV-EIRVKDGKVTGFVTE-KRGL-----VEDVDKLVLATGGYSYLYEY 181 (472)
T ss_dssp ------------CEECCCEE-EEEEETTEEEEEEET-TTEE-----ECCCSEEEECCCCCGGGSSS
T ss_pred ------------EEEECcEE-EEEEeCCEEEEEEEE-eCCC-----eEEeeeEEECCCCCcccCcc
Confidence 89999999 9987776653 2332 1122 46799999999999988754
No 100
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.74 E-value=4.3e-08 Score=105.18 Aligned_cols=140 Identities=16% Similarity=0.249 Sum_probs=82.3
Q ss_pred ccCCEEEECCCHHHHHHHHHHHhCCC-CEEEECCCCCCCCCCCeeeeChhHHHHHHhhhchHHHHHhcCCCccccceeEE
Q 005056 42 AVVPVLIVGAGPVGLVLSILLTKLGI-KCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIY 120 (716)
Q Consensus 42 ~~~dVlIVGaGpaGLt~Al~Lar~Gi-~v~liEr~~~~~~~p~a~~i~~rtmeilr~l~Gl~~~l~~~~~~~~~~~~~~~ 120 (716)
+++||+||||||+|+++|..|+++|+ +|+|||+.+ +. + .+...+. ....... .+
T Consensus 3 ~~~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~-~G----g---------~~~~~~~----------~~~~~~~-~~ 57 (369)
T 3d1c_A 3 QHHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGT-VG----H---------SFKHWPK----------STRTITP-SF 57 (369)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS-TT----H---------HHHTSCT----------TCBCSSC-CC
T ss_pred ccCcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCC-CC----C---------ccccCcc----------cccccCc-ch
Confidence 35899999999999999999999999 999999986 21 1 0100000 0000000 00
Q ss_pred eecCCCCceeeccCCCccccccccCCccccccChHHHHHHHHHHHHhcCceeecccccccccccccccceEEeCcEEEEE
Q 005056 121 CTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSV 200 (716)
Q Consensus 121 ~~~~~g~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~l~~~~~~~~~v~~g~~v~~i 200 (716)
.....|- ............. . ......+++..+...|.+.+++.|+ +++++++|+++
T Consensus 58 ~~~~~g~--~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~l~~~~~~~gv-------------------~i~~~~~v~~i 114 (369)
T 3d1c_A 58 TSNGFGM--PDMNAISMDTSPA-F-TFNEEHISGETYAEYLQVVANHYEL-------------------NIFENTVVTNI 114 (369)
T ss_dssp CCGGGTC--CCTTCSSTTCCHH-H-HHCCSSCBHHHHHHHHHHHHHHTTC-------------------EEECSCCEEEE
T ss_pred hcccCCc--hhhhhcccccccc-c-cccccCCCHHHHHHHHHHHHHHcCC-------------------eEEeCCEEEEE
Confidence 0000000 0000000000000 0 0001134556677778887888777 89999999999
Q ss_pred EecCCeEEEEEEeccCCceeeEEEEecEEEecCCCCh
Q 005056 201 SATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGS 237 (716)
Q Consensus 201 ~~~~~gv~v~v~~~~~g~~~~~~i~ad~VVgADG~~S 237 (716)
+.++++++++.. ++ ++.+|+||.|.|..+
T Consensus 115 ~~~~~~~~v~~~---~g-----~~~~d~vVlAtG~~~ 143 (369)
T 3d1c_A 115 SADDAYYTIATT---TE-----TYHADYIFVATGDYN 143 (369)
T ss_dssp EECSSSEEEEES---SC-----CEEEEEEEECCCSTT
T ss_pred EECCCeEEEEeC---CC-----EEEeCEEEECCCCCC
Confidence 987777666542 33 478999999999876
No 101
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=98.74 E-value=6e-08 Score=101.45 Aligned_cols=38 Identities=24% Similarity=0.490 Sum_probs=32.6
Q ss_pred CCCccCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCC
Q 005056 39 SNEAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (716)
Q Consensus 39 ~~~~~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~ 76 (716)
+.|+++||+||||||+||++|+.|+|+|.+|+|||+..
T Consensus 2 n~M~~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~~ 39 (304)
T 4fk1_A 2 NAMKYIDCAVIGAGPAGLNASLVLGRARKQIALFDNNT 39 (304)
T ss_dssp ----CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSC
T ss_pred CCCCCcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 45778999999999999999999999999999999863
No 102
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.74 E-value=4.1e-08 Score=103.32 Aligned_cols=113 Identities=19% Similarity=0.204 Sum_probs=77.0
Q ss_pred ccCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCCCCCCCeeeeChhHHHHHHhhhchHHHHHhcCCCccccceeEEe
Q 005056 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYC 121 (716)
Q Consensus 42 ~~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~~~~p~a~~i~~rtmeilr~l~Gl~~~l~~~~~~~~~~~~~~~~ 121 (716)
+++||+||||||+|+++|+.|+++|++|+||||.. + .+. + .. .. ..
T Consensus 15 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~-~----gg~------------~-~~------~~-~~--------- 60 (319)
T 3cty_A 15 RDFDVVIVGAGAAGFSAAVYAARSGFSVAILDKAV-A----GGL------------T-AE------AP-LV--------- 60 (319)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSS-T----TGG------------G-GG------CS-CB---------
T ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeCCC-C----Ccc------------c-cc------cc-hh---------
Confidence 46899999999999999999999999999999942 1 110 0 00 00 00
Q ss_pred ecCCCCceeeccCCCccccccccCCccccccChHHHHHHHHHHHHhcCceeecccccccccccccccceEEeCcEEEEEE
Q 005056 122 TSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVS 201 (716)
Q Consensus 122 ~~~~g~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~l~~~~~~~~~v~~g~~v~~i~ 201 (716)
.... .+ ..+....+...|.+.+.+.++ ++++ .++++++
T Consensus 61 --------~~~~-----~~---------~~~~~~~~~~~~~~~~~~~~v-------------------~~~~-~~v~~i~ 98 (319)
T 3cty_A 61 --------ENYL-----GF---------KSIVGSELAKLFADHAANYAK-------------------IREG-VEVRSIK 98 (319)
T ss_dssp --------CCBT-----TB---------SSBCHHHHHHHHHHHHHTTSE-------------------EEET-CCEEEEE
T ss_pred --------hhcC-----CC---------cccCHHHHHHHHHHHHHHcCC-------------------EEEE-eeEEEEE
Confidence 0000 00 123455667777777877776 7777 6899998
Q ss_pred ecCCeEEEEEEeccCCceeeEEEEecEEEecCCCChh
Q 005056 202 ATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGST 238 (716)
Q Consensus 202 ~~~~gv~v~v~~~~~g~~~~~~i~ad~VVgADG~~S~ 238 (716)
.+++.++++. ++. ++.+|+||.|+|.++.
T Consensus 99 ~~~~~~~v~~----~~~----~~~~~~li~AtG~~~~ 127 (319)
T 3cty_A 99 KTQGGFDIET----NDD----TYHAKYVIITTGTTHK 127 (319)
T ss_dssp EETTEEEEEE----SSS----EEEEEEEEECCCEEEC
T ss_pred EeCCEEEEEE----CCC----EEEeCEEEECCCCCcc
Confidence 8777665543 232 6899999999998653
No 103
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.73 E-value=4.5e-08 Score=102.82 Aligned_cols=115 Identities=17% Similarity=0.309 Sum_probs=78.0
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCCCCCCCeeeeChhHHHHHHhhhchHHHHHhcCCCccccceeEE
Q 005056 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIY 120 (716)
Q Consensus 41 ~~~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~~~~p~a~~i~~rtmeilr~l~Gl~~~l~~~~~~~~~~~~~~~ 120 (716)
|+.+||+||||||+|+++|+.|+++|++|+|||+.. +.+. + - .....
T Consensus 3 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~-----~gg~------------~-~-------~~~~~-------- 49 (320)
T 1trb_A 3 TKHSKLLILGSGPAGYTAAVYAARANLQPVLITGME-----KGGQ------------L-T-------TTTEV-------- 49 (320)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHTTTCCCEEECCSS-----TTGG------------G-G-------GCSBC--------
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHCCCcEEEEccCC-----CCce------------E-e-------cchhh--------
Confidence 456899999999999999999999999999999642 1110 0 0 00000
Q ss_pred eecCCCCceeeccCCCccccccccCCccccccChHHHHHHHHHHHHhcCceeecccccccccccccccceEEeCcEEEEE
Q 005056 121 CTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSV 200 (716)
Q Consensus 121 ~~~~~g~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~l~~~~~~~~~v~~g~~v~~i 200 (716)
... |.....+....+...|.+.+.+.++ ++++++ ++++
T Consensus 50 ---------~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~-v~~i 87 (320)
T 1trb_A 50 ---------ENW-------------PGDPNDLTGPLLMERMHEHATKFET-------------------EIIFDH-INKV 87 (320)
T ss_dssp ---------CCS-------------TTCCSSCBHHHHHHHHHHHHHHTTC-------------------EEECCC-EEEE
T ss_pred ---------hhC-------------CCCCCCCCHHHHHHHHHHHHHHCCC-------------------EEEEee-eeEE
Confidence 000 0000123455666777777777776 888886 8888
Q ss_pred EecCCeEEEEEEeccCCceeeEEEEecEEEecCCCChh
Q 005056 201 SATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGST 238 (716)
Q Consensus 201 ~~~~~gv~v~v~~~~~g~~~~~~i~ad~VVgADG~~S~ 238 (716)
+.+++.+++ +. ++. ++.+|+||.|+|.++.
T Consensus 88 ~~~~~~~~v-~~---~~~----~~~~~~lv~AtG~~~~ 117 (320)
T 1trb_A 88 DLQNRPFRL-NG---DNG----EYTCDALIIATGASAR 117 (320)
T ss_dssp ECSSSSEEE-EE---SSC----EEEEEEEEECCCEEEC
T ss_pred EecCCEEEE-Ee---CCC----EEEcCEEEECCCCCcC
Confidence 887777766 32 343 6899999999998753
No 104
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=98.73 E-value=2.1e-08 Score=107.70 Aligned_cols=38 Identities=21% Similarity=0.495 Sum_probs=34.5
Q ss_pred CCccCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCC
Q 005056 40 NEAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (716)
Q Consensus 40 ~~~~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~ 77 (716)
|+.++||+|||||++|+++|+.|+++|++|+||||...
T Consensus 3 m~~~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~~ 40 (363)
T 1c0p_A 3 MHSQKRVVVLGSGVIGLSSALILARKGYSVHILARDLP 40 (363)
T ss_dssp CCCSCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCT
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccCC
Confidence 34568999999999999999999999999999999763
No 105
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=98.72 E-value=2.8e-08 Score=116.84 Aligned_cols=38 Identities=39% Similarity=0.644 Sum_probs=34.5
Q ss_pred ccCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCCC
Q 005056 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFS 79 (716)
Q Consensus 42 ~~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~~ 79 (716)
...||+|||||++||++|+.|++.|++|+|+|+.+.+.
T Consensus 335 ~~~~v~viG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~g 372 (776)
T 4gut_A 335 HNKSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKDRIG 372 (776)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSC
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeccccee
Confidence 45899999999999999999999999999999987553
No 106
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.67 E-value=6.4e-08 Score=101.21 Aligned_cols=113 Identities=18% Similarity=0.298 Sum_probs=76.1
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCCCCCCCeeeeChhHHHHHHhhhchHHHHHhcCCCccccceeEEee
Q 005056 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCT 122 (716)
Q Consensus 43 ~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~~~~p~a~~i~~rtmeilr~l~Gl~~~l~~~~~~~~~~~~~~~~~ 122 (716)
++||+||||||+||++|+.|+++|++|+|||+... |... . ... +
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~li~~~~g----------------------G~~~---~-~~~------~---- 44 (310)
T 1fl2_A 1 AYDVLIVGSGPAGAAAAIYSARKGIRTGLMGERFG----------------------GQIL---D-TVD------I---- 44 (310)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSTT----------------------GGGG---G-CCE------E----
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCC----------------------ceec---c-ccc------c----
Confidence 37999999999999999999999999999986421 1100 0 000 0
Q ss_pred cCCCCceeeccCCCccccccccCCccccccChHHHHHHHHHHHHhcCceeecccccccccccccccceEEeCcEEEEEEe
Q 005056 123 SVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSA 202 (716)
Q Consensus 123 ~~~g~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~l~~~~~~~~~v~~g~~v~~i~~ 202 (716)
. .+. . ....+...+...|.+.+.+.++ +++++++++.++.
T Consensus 45 ----------~-----~~~--~----~~~~~~~~~~~~~~~~~~~~~v-------------------~~~~~~~v~~i~~ 84 (310)
T 1fl2_A 45 ----------E-----NYI--S----VPKTEGQKLAGALKVHVDEYDV-------------------DVIDSQSASKLIP 84 (310)
T ss_dssp ----------C-----CBT--T----BSSEEHHHHHHHHHHHHHTSCE-------------------EEECSCCEEEEEC
T ss_pred ----------c-----ccc--C----cCCCCHHHHHHHHHHHHHHcCC-------------------eEEccCEEEEEEe
Confidence 0 000 0 0012345667777777777776 8999999999976
Q ss_pred cC---CeEEEEEEeccCCceeeEEEEecEEEecCCCChh
Q 005056 203 TD---QCINVIASFLKEGKCTERNIQCNILIGTDGAGST 238 (716)
Q Consensus 203 ~~---~gv~v~v~~~~~g~~~~~~i~ad~VVgADG~~S~ 238 (716)
+. +.+++++. +|+ ++++|+||.|+|.++.
T Consensus 85 ~~~~~~~~~v~~~---~g~----~~~~~~lv~AtG~~~~ 116 (310)
T 1fl2_A 85 AAVEGGLHQIETA---SGA----VLKARSIIVATGAKWR 116 (310)
T ss_dssp CSSTTCCEEEEET---TSC----EEEEEEEEECCCEEEC
T ss_pred cccCCceEEEEEC---CCC----EEEeCEEEECcCCCcC
Confidence 53 25555543 443 6899999999998753
No 107
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.66 E-value=7e-08 Score=107.41 Aligned_cols=144 Identities=16% Similarity=0.189 Sum_probs=82.3
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCCCCCCCeeeeCh---hHHHHHHhhhchHHHHHhcCCCccccceeE
Q 005056 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINN---RYALVFRKLDGLAEEIERSQPPVDLWRKFI 119 (716)
Q Consensus 43 ~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~~~~p~a~~i~~---rtmeilr~l~Gl~~~l~~~~~~~~~~~~~~ 119 (716)
++||+||||||+|+++|+.|+++|++|+||||.. . .+..++. .+..++... ++.+.+........ +.
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~~-~----gG~~~~~g~~psk~ll~~~-~~~~~~~~~~~~~g----~~ 72 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPKY-W----GGVCLNVGCIPSKALLRNA-ELVHIFTKDAKAFG----IS 72 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSC-T----THHHHHHSHHHHHHHHHHH-HHHHHHHHHTTTTT----EE
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCC-C----CCcccccCchhhHHHHHHH-HHHHHHHHHHHhcC----CC
Confidence 5899999999999999999999999999999972 1 1222211 233445544 55555541111110 00
Q ss_pred EeecCCCCceeeccCCCccccccccCCccccccChHHHHHHHHHHHHhcCceeecccccccccccccccceEEeCcEEEE
Q 005056 120 YCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVS 199 (716)
Q Consensus 120 ~~~~~~g~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~l~~~~~~~~~v~~g~~v~~ 199 (716)
.+.. . ++.... .... . -...+...|.+.+.+.++ ++++++.+.
T Consensus 73 -----~~~~---~------~~~~~~-~~~~-~-~~~~l~~~l~~~~~~~gv-------------------~~~~g~~~~- 115 (464)
T 2a8x_A 73 -----GEVT---F------DYGIAY-DRSR-K-VAEGRVAGVHFLMKKNKI-------------------TEIHGYGTF- 115 (464)
T ss_dssp -----ECCE---E------CHHHHH-HHHH-H-HHHHHHHHHHHHHHHTTC-------------------EEECEEEEE-
T ss_pred -----CCCc---c------CHHHHH-HHHH-H-HHHHHHHHHHHHHHhCCC-------------------EEEEeEEEE-
Confidence 0000 0 000000 0000 0 013345556666666666 888887654
Q ss_pred EEecCCeEEEEEEeccCCceeeEEEEecEEEecCCCChhhh
Q 005056 200 VSATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGSTVR 240 (716)
Q Consensus 200 i~~~~~gv~v~v~~~~~g~~~~~~i~ad~VVgADG~~S~VR 240 (716)
.+.+.++++.. +|+ ..++++|+||.|+|.++.+.
T Consensus 116 --id~~~v~V~~~---~G~--~~~~~~d~lViAtG~~~~~~ 149 (464)
T 2a8x_A 116 --ADANTLLVDLN---DGG--TESVTFDNAIIATGSSTRLV 149 (464)
T ss_dssp --SSSSEEEEEET---TSC--CEEEEEEEEEECCCEEECCC
T ss_pred --ecCCeEEEEeC---CCc--eEEEEcCEEEECCCCCCCCC
Confidence 34556555432 342 24789999999999987543
No 108
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.63 E-value=7.2e-08 Score=107.85 Aligned_cols=38 Identities=26% Similarity=0.538 Sum_probs=34.3
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCC
Q 005056 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (716)
Q Consensus 41 ~~~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~ 78 (716)
+.++||+||||||+|+++|+.|++.|++|+||||++..
T Consensus 4 ~~~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~~ 41 (482)
T 1ojt_A 4 DAEYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTL 41 (482)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSCS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCC
Confidence 34689999999999999999999999999999997643
No 109
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=98.61 E-value=5e-07 Score=104.50 Aligned_cols=38 Identities=26% Similarity=0.309 Sum_probs=34.3
Q ss_pred CccCCEEEECCCHHHHHHHHHHH---h-CCCCEEEECCCCCC
Q 005056 41 EAVVPVLIVGAGPVGLVLSILLT---K-LGIKCSVLEKNKAF 78 (716)
Q Consensus 41 ~~~~dVlIVGaGpaGLt~Al~La---r-~Gi~v~liEr~~~~ 78 (716)
..++||||||||++||++|+.|+ + +|.+|+||||....
T Consensus 20 ~~~~DVvVIG~G~AGl~AAl~aa~~~~~~G~~V~vlEK~~~~ 61 (643)
T 1jnr_A 20 VVETDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEKAAVE 61 (643)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHHHTTTTCCEEEECSSCTT
T ss_pred eccCCEEEECcCHHHHHHHHHHhhhhhhCCCeEEEEeCcCCC
Confidence 35689999999999999999999 6 89999999998753
No 110
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.59 E-value=8.9e-08 Score=106.96 Aligned_cols=37 Identities=32% Similarity=0.583 Sum_probs=33.9
Q ss_pred ccCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCC
Q 005056 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (716)
Q Consensus 42 ~~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~ 78 (716)
.++||+||||||+|+++|+.|+++|++|+||||++.+
T Consensus 4 ~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~ 40 (478)
T 1v59_A 4 KSHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKL 40 (478)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCc
Confidence 4589999999999999999999999999999997543
No 111
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=98.58 E-value=4e-07 Score=101.87 Aligned_cols=35 Identities=20% Similarity=0.369 Sum_probs=32.8
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCCEEEECCC
Q 005056 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKN 75 (716)
Q Consensus 41 ~~~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~ 75 (716)
+.++||+||||||+||++|+.|+++|++|+||||.
T Consensus 24 ~~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~ 58 (484)
T 3o0h_A 24 SFDFDLFVIGSGSGGVRAARLAGALGKRVAIAEEY 58 (484)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred cCCCCEEEECcCHHHHHHHHHHHhCcCEEEEEeCC
Confidence 45689999999999999999999999999999994
No 112
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=98.56 E-value=1.5e-07 Score=104.91 Aligned_cols=63 Identities=22% Similarity=0.277 Sum_probs=48.3
Q ss_pred ccCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCCCCCCCee------------ee---ChhHHHHHHhhhchHHHH
Q 005056 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAH------------FI---NNRYALVFRKLDGLAEEI 105 (716)
Q Consensus 42 ~~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~~~~p~a~------------~i---~~rtmeilr~l~Gl~~~l 105 (716)
...||+|||||++||++|..|+++|++|+|+|+++.+..+.+.. .+ .+...++++++ |+.+.+
T Consensus 15 ~~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~GGr~~t~~~~g~~~~~g~~~~~~~~~~~~~~~~~~-gl~~~~ 92 (478)
T 2ivd_A 15 TGMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARLGGAVGTHALAGYLVEQGPNSFLDREPATRALAAAL-NLEGRI 92 (478)
T ss_dssp --CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSSBTTCCEEEETTEEEESSCCCEETTCHHHHHHHHHT-TCGGGE
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceeeeeccCCeeeecChhhhhhhhHHHHHHHHHc-CCccee
Confidence 45799999999999999999999999999999998663222111 11 46788999998 876544
No 113
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.53 E-value=3.1e-07 Score=103.67 Aligned_cols=114 Identities=16% Similarity=0.314 Sum_probs=78.3
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCCCCCCCeeeeChhHHHHHHhhhchHHHHHhcCCCccccceeEE
Q 005056 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIY 120 (716)
Q Consensus 41 ~~~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~~~~p~a~~i~~rtmeilr~l~Gl~~~l~~~~~~~~~~~~~~~ 120 (716)
+..+||+||||||+|+++|+.|+++|++|+|||++.. +... ... ++ +
T Consensus 210 ~~~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~~~G------G~~~--------~~~-~~---------~--------- 256 (521)
T 1hyu_A 210 RDAYDVLIVGSGPAGAAAAVYSARKGIRTGLMGERFG------GQVL--------DTV-DI---------E--------- 256 (521)
T ss_dssp SCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSTT------GGGT--------TCS-CB---------C---------
T ss_pred cCcccEEEECCcHHHHHHHHHHHhCCCeEEEEECCCC------Cccc--------ccc-cc---------c---------
Confidence 4468999999999999999999999999999996421 1000 000 00 0
Q ss_pred eecCCCCceeeccCCCccccccccCCccccccChHHHHHHHHHHHHhcCceeecccccccccccccccceEEeCcEEEEE
Q 005056 121 CTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSV 200 (716)
Q Consensus 121 ~~~~~g~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~l~~~~~~~~~v~~g~~v~~i 200 (716)
.+. ..+ ......+...|.+.+.+.|+ +++++++|+++
T Consensus 257 ------------------~~~--~~~----~~~~~~l~~~l~~~~~~~gv-------------------~v~~~~~v~~i 293 (521)
T 1hyu_A 257 ------------------NYI--SVP----KTEGQKLAGALKAHVSDYDV-------------------DVIDSQSASKL 293 (521)
T ss_dssp ------------------CBT--TBS----SBCHHHHHHHHHHHHHTSCE-------------------EEECSCCEEEE
T ss_pred ------------------ccC--CCC----CCCHHHHHHHHHHHHHHcCC-------------------EEEcCCEEEEE
Confidence 000 000 12456677778888888776 89999999999
Q ss_pred EecC---CeEEEEEEeccCCceeeEEEEecEEEecCCCCh
Q 005056 201 SATD---QCINVIASFLKEGKCTERNIQCNILIGTDGAGS 237 (716)
Q Consensus 201 ~~~~---~gv~v~v~~~~~g~~~~~~i~ad~VVgADG~~S 237 (716)
..+. +.+++++. +|. ++++|+||.|+|+++
T Consensus 294 ~~~~~~~~~~~V~~~---~g~----~~~~d~vVlAtG~~~ 326 (521)
T 1hyu_A 294 VPAATEGGLHQIETA---SGA----VLKARSIIIATGAKW 326 (521)
T ss_dssp ECCSSTTSCEEEEET---TSC----EEEEEEEEECCCEEE
T ss_pred EeccCCCceEEEEEC---CCC----EEEcCEEEECCCCCc
Confidence 7542 35555543 453 689999999999865
No 114
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=98.53 E-value=7.9e-07 Score=99.83 Aligned_cols=64 Identities=11% Similarity=0.107 Sum_probs=50.6
Q ss_pred ccChHHHHHHHHHHHHhcCceeecccccccccccccccceEEeCcEEEEEEecCC--------eEEEEEEeccCCceeeE
Q 005056 151 HFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSATDQ--------CINVIASFLKEGKCTER 222 (716)
Q Consensus 151 ~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~l~~~~~~~~~v~~g~~v~~i~~~~~--------gv~v~v~~~~~g~~~~~ 222 (716)
..+|.++...|...+++++. .|+|+++|++++..+. .++|++.+.++|+ ..
T Consensus 141 ~p~r~E~~~Yl~~~A~~~~~-------------------~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~--~~ 199 (501)
T 4b63_A 141 LPARLEFEDYMRWCAQQFSD-------------------VVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGE--IS 199 (501)
T ss_dssp CCBHHHHHHHHHHHHHTTGG-------------------GEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCC--EE
T ss_pred CCCHHHHHHHHHHHHHHcCC-------------------ceEcceEEEeeccccccccccccceEEEEEecCCCce--EE
Confidence 45789999999999887654 7999999999986542 4677777554453 56
Q ss_pred EEEecEEEecCCC
Q 005056 223 NIQCNILIGTDGA 235 (716)
Q Consensus 223 ~i~ad~VVgADG~ 235 (716)
+++|+.||.|-|.
T Consensus 200 ~~~ar~vVlatG~ 212 (501)
T 4b63_A 200 ARRTRKVVIAIGG 212 (501)
T ss_dssp EEEEEEEEECCCC
T ss_pred EEEeCEEEECcCC
Confidence 8999999999994
No 115
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.52 E-value=8.8e-07 Score=99.19 Aligned_cols=38 Identities=32% Similarity=0.640 Sum_probs=32.9
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCC
Q 005056 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (716)
Q Consensus 41 ~~~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~ 78 (716)
|+++||+||||||+|+++|+.|+++|++|+||||++..
T Consensus 23 m~~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~ 60 (491)
T 3urh_A 23 MMAYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRSTY 60 (491)
T ss_dssp ---CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSS
T ss_pred cccCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCC
Confidence 45699999999999999999999999999999987643
No 116
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=98.48 E-value=2.5e-07 Score=103.06 Aligned_cols=35 Identities=26% Similarity=0.427 Sum_probs=32.9
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCC--CEEEECCCCCC
Q 005056 44 VPVLIVGAGPVGLVLSILLTKLGI--KCSVLEKNKAF 78 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar~Gi--~v~liEr~~~~ 78 (716)
.||+|||||++||++|+.|+++|. +|+|||+++.+
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~~~ 39 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERL 39 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSSSS
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCCCC
Confidence 589999999999999999999999 99999998755
No 117
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.44 E-value=2.7e-07 Score=102.76 Aligned_cols=37 Identities=38% Similarity=0.603 Sum_probs=34.1
Q ss_pred ccCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCC
Q 005056 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (716)
Q Consensus 42 ~~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~ 78 (716)
.++||+||||||+|+++|+.|++.|++|+||||.+..
T Consensus 5 ~~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~~ 41 (470)
T 1dxl_A 5 DENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGAL 41 (470)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSS
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCc
Confidence 4589999999999999999999999999999998654
No 118
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=98.44 E-value=1.9e-07 Score=97.77 Aligned_cols=34 Identities=26% Similarity=0.419 Sum_probs=32.3
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCC
Q 005056 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (716)
Q Consensus 43 ~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~ 76 (716)
.+||+||||||+||++|+.|+++|++|+|||+..
T Consensus 4 ~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~ 37 (314)
T 4a5l_A 4 IHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFM 37 (314)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSS
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEecCC
Confidence 3899999999999999999999999999999875
No 119
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.39 E-value=1.1e-06 Score=91.72 Aligned_cols=111 Identities=19% Similarity=0.249 Sum_probs=75.0
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEE-ECCCCCCCCCCCeeeeChhHHHHHHhhhchHHHHHhcCCCccccceeEEe
Q 005056 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSV-LEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYC 121 (716)
Q Consensus 43 ~~dVlIVGaGpaGLt~Al~Lar~Gi~v~l-iEr~~~~~~~p~a~~i~~rtmeilr~l~Gl~~~l~~~~~~~~~~~~~~~~ 121 (716)
.+||+||||||+||++|+.|+++|++|+| +||. .+ . |... ... ..
T Consensus 4 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~~-~~----g----------------G~~~---~~~-~~--------- 49 (315)
T 3r9u_A 4 MLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEKG-MP----G----------------GQIT---SSS-EI--------- 49 (315)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHTCSCEEEECSS-ST----T----------------GGGG---GCS-CB---------
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCCeEEEEeCC-CC----C----------------ceee---eec-ee---------
Confidence 47999999999999999999999999999 9993 22 1 1100 000 00
Q ss_pred ecCCCCceeeccCCCccccccccCCccccccChHHHHHHHHHHHHhcCceeecccccccccccccccceEEeCcEEEEEE
Q 005056 122 TSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVS 201 (716)
Q Consensus 122 ~~~~g~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~l~~~~~~~~~v~~g~~v~~i~ 201 (716)
. ..|.....++...+...|.+.+.+.++ +++++ +++++
T Consensus 50 --------~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~v-------------------~~~~~-~v~~i- 87 (315)
T 3r9u_A 50 --------E-------------NYPGVAQVMDGISFMAPWSEQCMRFGL-------------------KHEMV-GVEQI- 87 (315)
T ss_dssp --------C-------------CSTTCCSCBCHHHHHHHHHHHHTTTCC-------------------EEECC-CEEEE-
T ss_pred --------c-------------cCCCCCCCCCHHHHHHHHHHHHHHcCc-------------------EEEEE-EEEEE-
Confidence 0 000001123456777778888888776 78888 88888
Q ss_pred ecC--CeEEEEEEeccCCceeeEEEEecEEEecCCCC
Q 005056 202 ATD--QCINVIASFLKEGKCTERNIQCNILIGTDGAG 236 (716)
Q Consensus 202 ~~~--~gv~v~v~~~~~g~~~~~~i~ad~VVgADG~~ 236 (716)
.++ +.+++++. ++ . ++.+|+||.|.|..
T Consensus 88 ~~~~~~~~~v~~~---~~---~-~~~~d~lvlAtG~~ 117 (315)
T 3r9u_A 88 LKNSDGSFTIKLE---GG---K-TELAKAVIVCTGSA 117 (315)
T ss_dssp EECTTSCEEEEET---TS---C-EEEEEEEEECCCEE
T ss_pred ecCCCCcEEEEEe---cC---C-EEEeCEEEEeeCCC
Confidence 666 66664343 22 1 68999999999973
No 120
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=98.34 E-value=5.2e-08 Score=104.05 Aligned_cols=33 Identities=21% Similarity=0.409 Sum_probs=31.3
Q ss_pred CCEEEECCCHHHHHHHHHHHhCC------CCEEEECCCC
Q 005056 44 VPVLIVGAGPVGLVLSILLTKLG------IKCSVLEKNK 76 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar~G------i~v~liEr~~ 76 (716)
.||+|||||++||++|+.|+++| .+|+||||..
T Consensus 1 mdVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~ 39 (351)
T 3g3e_A 1 MRVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRF 39 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSC
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCC
Confidence 38999999999999999999998 9999999986
No 121
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.32 E-value=2e-06 Score=96.25 Aligned_cols=37 Identities=16% Similarity=0.138 Sum_probs=34.0
Q ss_pred ccCCEEEECCCHHHHHHHHHHHhCC---CCEEEECCCCCC
Q 005056 42 AVVPVLIVGAGPVGLVLSILLTKLG---IKCSVLEKNKAF 78 (716)
Q Consensus 42 ~~~dVlIVGaGpaGLt~Al~Lar~G---i~v~liEr~~~~ 78 (716)
+++||+||||||+|+++|..|+++| .+|+|||+.+..
T Consensus 34 m~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~~ 73 (490)
T 2bc0_A 34 WGSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNI 73 (490)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSCC
T ss_pred cCCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCCC
Confidence 4589999999999999999999998 999999998754
No 122
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.29 E-value=9e-06 Score=90.55 Aligned_cols=36 Identities=39% Similarity=0.672 Sum_probs=33.7
Q ss_pred ccCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCC
Q 005056 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (716)
Q Consensus 42 ~~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~ 77 (716)
.++||+||||||+|+++|+.|+++|.+|+||||.+.
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~ 37 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYKG 37 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEECCBC
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCCc
Confidence 458999999999999999999999999999999863
No 123
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.28 E-value=2e-06 Score=98.53 Aligned_cols=39 Identities=18% Similarity=0.221 Sum_probs=34.8
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhC--CCCEEEECCCCCCC
Q 005056 41 EAVVPVLIVGAGPVGLVLSILLTKL--GIKCSVLEKNKAFS 79 (716)
Q Consensus 41 ~~~~dVlIVGaGpaGLt~Al~Lar~--Gi~v~liEr~~~~~ 79 (716)
++..+|+||||||+||++|..|+++ |.+|+||||.+...
T Consensus 34 ~~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~~ 74 (588)
T 3ics_A 34 WGSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYIS 74 (588)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCSS
T ss_pred ccCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCcc
Confidence 3447999999999999999999998 89999999998653
No 124
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.26 E-value=1.2e-05 Score=89.59 Aligned_cols=36 Identities=31% Similarity=0.470 Sum_probs=33.5
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCC
Q 005056 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (716)
Q Consensus 41 ~~~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~ 76 (716)
+.++||+||||||+|+++|+.|+++|.+|+||||..
T Consensus 18 ~~~~dVvIIGgG~aGl~aA~~la~~G~~V~liE~~~ 53 (478)
T 3dk9_A 18 VASYDYLVIGGGSGGLASARRAAELGARAAVVESHK 53 (478)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Confidence 456999999999999999999999999999999874
No 125
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.26 E-value=1.5e-06 Score=95.63 Aligned_cols=35 Identities=23% Similarity=0.316 Sum_probs=32.5
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCC--CEEEECCCCC
Q 005056 43 VVPVLIVGAGPVGLVLSILLTKLGI--KCSVLEKNKA 77 (716)
Q Consensus 43 ~~dVlIVGaGpaGLt~Al~Lar~Gi--~v~liEr~~~ 77 (716)
++||+||||||+|+++|..|+++|. +|+|||+.+.
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~~ 40 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATV 40 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCCS
T ss_pred CCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCCC
Confidence 5799999999999999999999998 7999998864
No 126
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.22 E-value=3.9e-06 Score=92.87 Aligned_cols=36 Identities=22% Similarity=0.383 Sum_probs=33.4
Q ss_pred CCEEEECCCHHHHHHHHHHHhC--CCCEEEECCCCCCC
Q 005056 44 VPVLIVGAGPVGLVLSILLTKL--GIKCSVLEKNKAFS 79 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar~--Gi~v~liEr~~~~~ 79 (716)
.||+||||||+||++|..|+++ |.+|+||||.+...
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~g 40 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVG 40 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCCS
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCc
Confidence 5999999999999999999998 99999999998654
No 127
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.21 E-value=3.1e-06 Score=94.22 Aligned_cols=36 Identities=14% Similarity=0.330 Sum_probs=31.1
Q ss_pred cCCEEEECCCHHHHHHHHHHHhC--CCCEEEECCCCCC
Q 005056 43 VVPVLIVGAGPVGLVLSILLTKL--GIKCSVLEKNKAF 78 (716)
Q Consensus 43 ~~dVlIVGaGpaGLt~Al~Lar~--Gi~v~liEr~~~~ 78 (716)
+.+|+||||||+||++|..|+++ |.+|+||||.+..
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~ 40 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRI 40 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC---
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCcc
Confidence 36999999999999999999999 9999999999865
No 128
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.21 E-value=1.5e-05 Score=89.80 Aligned_cols=37 Identities=16% Similarity=0.255 Sum_probs=34.4
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCC
Q 005056 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (716)
Q Consensus 41 ~~~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~ 77 (716)
+.++||+||||||+|+++|+.|++.|.+|+||||.+.
T Consensus 41 ~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~ 77 (523)
T 1mo9_A 41 PREYDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWPF 77 (523)
T ss_dssp CSCBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSSS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 4568999999999999999999999999999999874
No 129
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.21 E-value=2e-06 Score=95.90 Aligned_cols=37 Identities=35% Similarity=0.593 Sum_probs=34.0
Q ss_pred ccCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCC
Q 005056 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (716)
Q Consensus 42 ~~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~ 78 (716)
.++||+||||||+|+++|..|+++|++|+||||.+.+
T Consensus 5 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~~ 41 (474)
T 1zmd_A 5 IDADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETL 41 (474)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCc
Confidence 4589999999999999999999999999999998643
No 130
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.19 E-value=4.8e-06 Score=92.25 Aligned_cols=33 Identities=42% Similarity=0.668 Sum_probs=31.8
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEECCC
Q 005056 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKN 75 (716)
Q Consensus 43 ~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~ 75 (716)
++||+||||||+|+++|..|++.|.+|+||||.
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~ 35 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKG 35 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 489999999999999999999999999999997
No 131
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=98.19 E-value=1.6e-05 Score=91.44 Aligned_cols=39 Identities=28% Similarity=0.442 Sum_probs=34.7
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCCC
Q 005056 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFS 79 (716)
Q Consensus 41 ~~~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~~ 79 (716)
+.++||+|||||++|+++|+.|+++|++|+||||.+...
T Consensus 44 ~~~~dvvIIG~G~aGl~aA~~l~~~G~~V~liE~~~~~g 82 (623)
T 3pl8_A 44 DIKYDVVIVGSGPIGCTYARELVGAGYKVAMFDIGEIDS 82 (623)
T ss_dssp --CEEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCS
T ss_pred cccCCEEEECCcHHHHHHHHHHHhCCCcEEEEeccCCCC
Confidence 356899999999999999999999999999999987654
No 132
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.18 E-value=2.2e-06 Score=93.52 Aligned_cols=33 Identities=21% Similarity=0.309 Sum_probs=31.4
Q ss_pred CCEEEECCCHHHHHHHHHHHh---CCCCEEEECCCC
Q 005056 44 VPVLIVGAGPVGLVLSILLTK---LGIKCSVLEKNK 76 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar---~Gi~v~liEr~~ 76 (716)
.+|+|||||++||++|..|++ .|++|+|||+++
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~ 37 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSR 37 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCC
Confidence 379999999999999999999 899999999988
No 133
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=98.17 E-value=9.9e-07 Score=92.35 Aligned_cols=37 Identities=24% Similarity=0.543 Sum_probs=33.3
Q ss_pred CCccCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCC
Q 005056 40 NEAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (716)
Q Consensus 40 ~~~~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~ 76 (716)
+.++|||+||||||+||++|+.|+++|++|+||||..
T Consensus 3 te~~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~~~ 39 (312)
T 4gcm_A 3 TEIDFDIAIIGAGPAGMTAAVYASRANLKTVMIERGI 39 (312)
T ss_dssp -CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEecCC
Confidence 3456999999999999999999999999999999853
No 134
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=98.15 E-value=1.7e-06 Score=91.44 Aligned_cols=38 Identities=37% Similarity=0.503 Sum_probs=33.6
Q ss_pred CccCCEEEECCCHHHHHHHHHHHh--CCCCEEEECCCCCC
Q 005056 41 EAVVPVLIVGAGPVGLVLSILLTK--LGIKCSVLEKNKAF 78 (716)
Q Consensus 41 ~~~~dVlIVGaGpaGLt~Al~Lar--~Gi~v~liEr~~~~ 78 (716)
..++||+||||||+||++|+.|++ .|++|+||||.+.+
T Consensus 63 ~~~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~ 102 (326)
T 3fpz_A 63 FAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAP 102 (326)
T ss_dssp TTEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSC
T ss_pred ccCCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCC
Confidence 345899999999999999999975 59999999998765
No 135
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=98.14 E-value=2.4e-05 Score=87.32 Aligned_cols=35 Identities=17% Similarity=0.270 Sum_probs=32.4
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCCEEEECCC
Q 005056 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKN 75 (716)
Q Consensus 41 ~~~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~ 75 (716)
+.++||+||||||+|+++|+.|+++|.+|+||||.
T Consensus 7 ~~~~DvvVIGgG~aGl~aA~~la~~G~~V~liEk~ 41 (483)
T 3dgh_A 7 SYDYDLIVIGGGSAGLACAKEAVLNGARVACLDFV 41 (483)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCEEEEEEec
Confidence 35699999999999999999999999999999963
No 136
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.14 E-value=2.1e-06 Score=95.43 Aligned_cols=36 Identities=39% Similarity=0.636 Sum_probs=33.3
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCC
Q 005056 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (716)
Q Consensus 43 ~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~ 78 (716)
++||+||||||+|+++|+.|++.|++|+||||.+.+
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~~ 37 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMKTACVEKRGAL 37 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCc
Confidence 479999999999999999999999999999998643
No 137
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.14 E-value=5.9e-06 Score=89.42 Aligned_cols=38 Identities=21% Similarity=0.330 Sum_probs=34.2
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCC
Q 005056 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (716)
Q Consensus 41 ~~~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~ 78 (716)
.++++|+||||||+|+++|..|.+.+.+++|||+.+..
T Consensus 7 ~~~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~ 44 (385)
T 3klj_A 7 HKSTKILILGAGPAGFSAAKAALGKCDDITMINSEKYL 44 (385)
T ss_dssp -CBCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSC
T ss_pred cCCCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCC
Confidence 35689999999999999999998889999999999864
No 138
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.14 E-value=5.2e-06 Score=91.76 Aligned_cols=36 Identities=22% Similarity=0.405 Sum_probs=33.2
Q ss_pred cCCEEEECCCHHHHHHHHHHHhC--CCCEEEECCCCCC
Q 005056 43 VVPVLIVGAGPVGLVLSILLTKL--GIKCSVLEKNKAF 78 (716)
Q Consensus 43 ~~dVlIVGaGpaGLt~Al~Lar~--Gi~v~liEr~~~~ 78 (716)
..+|+||||||+||++|..|++. |.+|+||||.+..
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~ 40 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWV 40 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCC
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCcc
Confidence 36999999999999999999998 8999999999855
No 139
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.14 E-value=2e-05 Score=87.44 Aligned_cols=35 Identities=17% Similarity=0.434 Sum_probs=32.8
Q ss_pred ccCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCC
Q 005056 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (716)
Q Consensus 42 ~~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~ 76 (716)
.++||+||||||+|+++|+.|+++|.+|+||||..
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~ 37 (467)
T 1zk7_A 3 PPVQVAVIGSGGAAMAAALKAVEQGAQVTLIERGT 37 (467)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 45899999999999999999999999999999983
No 140
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.13 E-value=1.9e-05 Score=87.58 Aligned_cols=104 Identities=18% Similarity=0.274 Sum_probs=77.7
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCCCCCCCeeeeChhHHHHHHhhhchHHHHHhcCCCccccceeEEeec
Q 005056 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCTS 123 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~~~~p~a~~i~~rtmeilr~l~Gl~~~l~~~~~~~~~~~~~~~~~~ 123 (716)
-+|+|||||++|+-+|..|++.|.+|+|+|+.+.+.+. +
T Consensus 170 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~----------------~------------------------- 208 (464)
T 2eq6_A 170 KRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEILPQ----------------G------------------------- 208 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT----------------S-------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCccccc----------------c-------------------------
Confidence 58999999999999999999999999999998653210 0
Q ss_pred CCCCceeeccCCCccccccccCCccccccChHHHHHHHHHHHHhcCceeecccccccccccccccceEEeCcEEEEEEec
Q 005056 124 VTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSAT 203 (716)
Q Consensus 124 ~~g~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~l~~~~~~~~~v~~g~~v~~i~~~ 203 (716)
...+...|.+.+++.|+ ++++++++++++.+
T Consensus 209 ------------------------------~~~~~~~l~~~l~~~gV-------------------~i~~~~~v~~i~~~ 239 (464)
T 2eq6_A 209 ------------------------------DPETAALLRRALEKEGI-------------------RVRTKTKAVGYEKK 239 (464)
T ss_dssp ------------------------------CHHHHHHHHHHHHHTTC-------------------EEECSEEEEEEEEE
T ss_pred ------------------------------CHHHHHHHHHHHHhcCC-------------------EEEcCCEEEEEEEe
Confidence 01233445566677777 99999999999988
Q ss_pred CCeEEEEEEeccCCceeeEEEEecEEEecCCCChhh
Q 005056 204 DQCINVIASFLKEGKCTERNIQCNILIGTDGAGSTV 239 (716)
Q Consensus 204 ~~gv~v~v~~~~~g~~~~~~i~ad~VVgADG~~S~V 239 (716)
++++++++....+|+ ..++.+|+||.|.|.++..
T Consensus 240 ~~~~~v~~~~~~~g~--~~~i~~D~vv~a~G~~p~~ 273 (464)
T 2eq6_A 240 KDGLHVRLEPAEGGE--GEEVVVDKVLVAVGRKPRT 273 (464)
T ss_dssp TTEEEEEEEETTCCS--CEEEEESEEEECSCEEESC
T ss_pred CCEEEEEEeecCCCc--eeEEEcCEEEECCCcccCC
Confidence 777766654111143 3478999999999987643
No 141
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=98.13 E-value=5.5e-06 Score=92.05 Aligned_cols=37 Identities=19% Similarity=0.259 Sum_probs=33.9
Q ss_pred ccCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCC
Q 005056 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (716)
Q Consensus 42 ~~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~ 78 (716)
+++||+||||||+|+++|+.|+++|++|+||||++..
T Consensus 3 ~~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~ 39 (466)
T 3l8k_A 3 LKYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGEL 39 (466)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSS
T ss_pred ccceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCC
Confidence 4689999999999999999999999999999987643
No 142
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.12 E-value=7.2e-06 Score=89.30 Aligned_cols=35 Identities=26% Similarity=0.483 Sum_probs=32.5
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCC--CEEEECCCCCC
Q 005056 44 VPVLIVGAGPVGLVLSILLTKLGI--KCSVLEKNKAF 78 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar~Gi--~v~liEr~~~~ 78 (716)
.+|+|||||++|+++|..|+++|. +|+|||+.+..
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~ 38 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEKHL 38 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCSCEEEECCSSSS
T ss_pred CCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeCCCCC
Confidence 589999999999999999999999 89999998754
No 143
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.12 E-value=5.1e-06 Score=90.79 Aligned_cols=38 Identities=29% Similarity=0.406 Sum_probs=34.2
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCC--EEEECCCCCC
Q 005056 41 EAVVPVLIVGAGPVGLVLSILLTKLGIK--CSVLEKNKAF 78 (716)
Q Consensus 41 ~~~~dVlIVGaGpaGLt~Al~Lar~Gi~--v~liEr~~~~ 78 (716)
+++++|+|||||++|+++|..|+++|.+ |+|||+.+..
T Consensus 7 ~~~~~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~ 46 (415)
T 3lxd_A 7 AERADVVIVGAGHGGAQAAIALRQNGFEGRVLVIGREPEI 46 (415)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTCCSCEEEEESSSSC
T ss_pred CCCCcEEEECChHHHHHHHHHHHccCcCCCEEEEecCCCC
Confidence 3458999999999999999999999987 9999998754
No 144
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.12 E-value=5.5e-06 Score=91.63 Aligned_cols=35 Identities=17% Similarity=0.197 Sum_probs=32.5
Q ss_pred CCEEEECCCHHHHHHHHHHHhC--CCCEEEECCCCCC
Q 005056 44 VPVLIVGAGPVGLVLSILLTKL--GIKCSVLEKNKAF 78 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar~--Gi~v~liEr~~~~ 78 (716)
+||+||||||+|+++|..|+++ |.+|+|||+.+..
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~~ 37 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDNI 37 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSCC
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCC
Confidence 4899999999999999999998 9999999998754
No 145
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=98.11 E-value=1.5e-05 Score=89.81 Aligned_cols=36 Identities=25% Similarity=0.311 Sum_probs=33.7
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCC
Q 005056 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (716)
Q Consensus 41 ~~~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~ 76 (716)
+.++||+||||||+|+++|+.|++.|.+|+||||.+
T Consensus 30 ~~~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~ 65 (519)
T 3qfa_A 30 SYDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVT 65 (519)
T ss_dssp SCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccC
Confidence 456899999999999999999999999999999975
No 146
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.11 E-value=5.2e-06 Score=92.63 Aligned_cols=35 Identities=17% Similarity=0.419 Sum_probs=32.5
Q ss_pred CCEEEECCCHHHHHHHHHHHhC--CCCEEEECCCCCC
Q 005056 44 VPVLIVGAGPVGLVLSILLTKL--GIKCSVLEKNKAF 78 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar~--Gi~v~liEr~~~~ 78 (716)
.||+||||||+|+++|..|++. |.+|+|||+.+..
T Consensus 37 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~ 73 (480)
T 3cgb_A 37 MNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIY 73 (480)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCC
T ss_pred ceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCC
Confidence 5999999999999999999997 9999999998754
No 147
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.10 E-value=1.7e-05 Score=87.81 Aligned_cols=100 Identities=18% Similarity=0.301 Sum_probs=75.7
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCCCCCCCeeeeChhHHHHHHhhhchHHHHHhcCCCccccceeEEee
Q 005056 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCT 122 (716)
Q Consensus 43 ~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~~~~p~a~~i~~rtmeilr~l~Gl~~~l~~~~~~~~~~~~~~~~~ 122 (716)
.-+|+|||||++|+.+|..|++.|.+|+|+|+.+.+.+. .
T Consensus 167 ~~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~l~~----------------~------------------------ 206 (455)
T 2yqu_A 167 PKRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRILPT----------------M------------------------ 206 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT----------------S------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCccccc----------------c------------------------
Confidence 357999999999999999999999999999998653110 0
Q ss_pred cCCCCceeeccCCCccccccccCCccccccChHHHHHHHHHHHHhcCceeecccccccccccccccceEEeCcEEEEEEe
Q 005056 123 SVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSA 202 (716)
Q Consensus 123 ~~~g~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~l~~~~~~~~~v~~g~~v~~i~~ 202 (716)
...+...|.+.+++.|+ +++++++|++++.
T Consensus 207 -------------------------------~~~~~~~l~~~l~~~Gv-------------------~i~~~~~V~~i~~ 236 (455)
T 2yqu_A 207 -------------------------------DLEVSRAAERVFKKQGL-------------------TIRTGVRVTAVVP 236 (455)
T ss_dssp -------------------------------CHHHHHHHHHHHHHHTC-------------------EEECSCCEEEEEE
T ss_pred -------------------------------CHHHHHHHHHHHHHCCC-------------------EEEECCEEEEEEE
Confidence 01123334555666676 9999999999998
Q ss_pred cCCeEEEEEEeccCCceeeEEEEecEEEecCCCChhh
Q 005056 203 TDQCINVIASFLKEGKCTERNIQCNILIGTDGAGSTV 239 (716)
Q Consensus 203 ~~~gv~v~v~~~~~g~~~~~~i~ad~VVgADG~~S~V 239 (716)
+++++.+++. +|+ ++.+|+||.|.|.++..
T Consensus 237 ~~~~v~v~~~---~g~----~i~~D~vv~A~G~~p~~ 266 (455)
T 2yqu_A 237 EAKGARVELE---GGE----VLEADRVLVAVGRRPYT 266 (455)
T ss_dssp ETTEEEEEET---TSC----EEEESEEEECSCEEECC
T ss_pred eCCEEEEEEC---CCe----EEEcCEEEECcCCCcCC
Confidence 8777665542 343 68999999999987653
No 148
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.10 E-value=1.2e-05 Score=88.70 Aligned_cols=34 Identities=21% Similarity=0.219 Sum_probs=31.9
Q ss_pred CEEEECCCHHHHHHHHHHHhC--CCCEEEECCCCCC
Q 005056 45 PVLIVGAGPVGLVLSILLTKL--GIKCSVLEKNKAF 78 (716)
Q Consensus 45 dVlIVGaGpaGLt~Al~Lar~--Gi~v~liEr~~~~ 78 (716)
||+||||||+|+++|..|+++ |.+|+|||+.+..
T Consensus 2 dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~ 37 (447)
T 1nhp_A 2 KVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFI 37 (447)
T ss_dssp EEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSS
T ss_pred eEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCcc
Confidence 799999999999999999998 9999999998754
No 149
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.08 E-value=1.6e-05 Score=85.87 Aligned_cols=100 Identities=21% Similarity=0.300 Sum_probs=76.6
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCCCCCCCeeeeChhHHHHHHhhhchHHHHHhcCCCccccceeEEee
Q 005056 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCT 122 (716)
Q Consensus 43 ~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~~~~p~a~~i~~rtmeilr~l~Gl~~~l~~~~~~~~~~~~~~~~~ 122 (716)
.-+|+|||||++|+-+|..|++.|.+|+|+|+.+.+... .
T Consensus 145 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~----------------~------------------------ 184 (384)
T 2v3a_A 145 KRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVMPG----------------L------------------------ 184 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT----------------T------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCcchhhc----------------c------------------------
Confidence 358999999999999999999999999999987653210 0
Q ss_pred cCCCCceeeccCCCccccccccCCccccccChHHHHHHHHHHHHhcCceeecccccccccccccccceEEeCcEEEEEEe
Q 005056 123 SVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSA 202 (716)
Q Consensus 123 ~~~g~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~l~~~~~~~~~v~~g~~v~~i~~ 202 (716)
....+...|.+.+++.|+ ++++++++++++.
T Consensus 185 ------------------------------~~~~~~~~l~~~l~~~gv-------------------~i~~~~~v~~i~~ 215 (384)
T 2v3a_A 185 ------------------------------LHPAAAKAVQAGLEGLGV-------------------RFHLGPVLASLKK 215 (384)
T ss_dssp ------------------------------SCHHHHHHHHHHHHTTTC-------------------EEEESCCEEEEEE
T ss_pred ------------------------------cCHHHHHHHHHHHHHcCC-------------------EEEeCCEEEEEEe
Confidence 001234456666677777 9999999999998
Q ss_pred cCCeEEEEEEeccCCceeeEEEEecEEEecCCCChh
Q 005056 203 TDQCINVIASFLKEGKCTERNIQCNILIGTDGAGST 238 (716)
Q Consensus 203 ~~~gv~v~v~~~~~g~~~~~~i~ad~VVgADG~~S~ 238 (716)
+++++.+++. +|+ ++.+|+||.|.|.++.
T Consensus 216 ~~~~~~v~~~---~g~----~i~~d~vv~a~G~~p~ 244 (384)
T 2v3a_A 216 AGEGLEAHLS---DGE----VIPCDLVVSAVGLRPR 244 (384)
T ss_dssp ETTEEEEEET---TSC----EEEESEEEECSCEEEC
T ss_pred cCCEEEEEEC---CCC----EEECCEEEECcCCCcC
Confidence 8777666543 453 6899999999998764
No 150
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.07 E-value=7.2e-06 Score=93.35 Aligned_cols=36 Identities=19% Similarity=0.254 Sum_probs=32.9
Q ss_pred CCEEEECCCHHHHHHHHHHHhC--CCCEEEECCCCCCC
Q 005056 44 VPVLIVGAGPVGLVLSILLTKL--GIKCSVLEKNKAFS 79 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar~--Gi~v~liEr~~~~~ 79 (716)
.+|+||||||+||++|..|+++ |.+|+|||+.+...
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~~ 39 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGEYVS 39 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCSS
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCcc
Confidence 3799999999999999999998 89999999997653
No 151
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=98.03 E-value=5.5e-06 Score=91.44 Aligned_cols=39 Identities=36% Similarity=0.527 Sum_probs=35.6
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCCC
Q 005056 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFS 79 (716)
Q Consensus 41 ~~~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~~ 79 (716)
+.++||+|||||++||++|+.|+++|++|+|+|++..+.
T Consensus 3 ~~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~G 41 (453)
T 2yg5_A 3 TLQRDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRVG 41 (453)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCC
Confidence 456899999999999999999999999999999987653
No 152
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=98.03 E-value=2.4e-06 Score=95.92 Aligned_cols=38 Identities=32% Similarity=0.556 Sum_probs=34.6
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhC-CCCEEEECCCCCC
Q 005056 41 EAVVPVLIVGAGPVGLVLSILLTKL-GIKCSVLEKNKAF 78 (716)
Q Consensus 41 ~~~~dVlIVGaGpaGLt~Al~Lar~-Gi~v~liEr~~~~ 78 (716)
.+++||+|||||++||++|..|+++ |++|+|+|+++.+
T Consensus 8 ~~~~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~ 46 (513)
T 4gde_A 8 DISVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETP 46 (513)
T ss_dssp SEEEEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSC
T ss_pred CCCCCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCC
Confidence 4568999999999999999999985 9999999999865
No 153
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=98.02 E-value=4e-06 Score=92.81 Aligned_cols=38 Identities=26% Similarity=0.376 Sum_probs=35.4
Q ss_pred ccCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCCC
Q 005056 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFS 79 (716)
Q Consensus 42 ~~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~~ 79 (716)
.++||+|||||++||++|+.|+++|.+|+|+||++.+.
T Consensus 10 ~~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~~~G 47 (453)
T 2bcg_G 10 TDYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYG 47 (453)
T ss_dssp CBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCCC
Confidence 56899999999999999999999999999999998663
No 154
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.01 E-value=7.5e-06 Score=90.64 Aligned_cols=35 Identities=46% Similarity=0.761 Sum_probs=32.7
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCC
Q 005056 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~ 78 (716)
+||+||||||+|+++|..|++.|++|+|||+.+..
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~ 36 (455)
T 2yqu_A 2 YDLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEKAL 36 (455)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSS
T ss_pred CCEEEECCChhHHHHHHHHHHCCCeEEEEeCCCCC
Confidence 79999999999999999999999999999998643
No 155
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.00 E-value=2.2e-05 Score=87.42 Aligned_cols=36 Identities=19% Similarity=0.294 Sum_probs=33.0
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCC
Q 005056 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (716)
Q Consensus 41 ~~~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~ 76 (716)
+.++||+||||||+|+++|+.|++.|.+|+||||+.
T Consensus 9 ~~~~dVvVIGgG~aGl~aA~~l~~~g~~V~liE~~~ 44 (479)
T 2hqm_A 9 TKHYDYLVIGGGSGGVASARRAASYGAKTLLVEAKA 44 (479)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTSCCEEEEESSC
T ss_pred cccCCEEEEcCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 346899999999999999999999999999999974
No 156
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=98.00 E-value=6.7e-06 Score=92.16 Aligned_cols=62 Identities=24% Similarity=0.375 Sum_probs=48.7
Q ss_pred ccCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCCCCCC------------Ceeee---ChhHHHHHHhhhchHHH
Q 005056 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHP------------QAHFI---NNRYALVFRKLDGLAEE 104 (716)
Q Consensus 42 ~~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~~~~p------------~a~~i---~~rtmeilr~l~Gl~~~ 104 (716)
..+||+|||||++||++|+.|+++|++|+|+|+++.+..+. .++.+ .+..+++++++ |+.+.
T Consensus 12 ~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~l-gl~~~ 88 (504)
T 1sez_A 12 SAKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGGKLRSVSQDGLIWDEGANTMTESEGDVTFLIDSL-GLREK 88 (504)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSCSSCCEEEETTEEEESSCCCBCCCSHHHHHHHHHT-TCGGG
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCCCceeeeccCCeEEecCCcccccCcHHHHHHHHHc-CCccc
Confidence 45899999999999999999999999999999998763221 11222 46788999998 88654
No 157
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=97.98 E-value=6.1e-06 Score=90.90 Aligned_cols=34 Identities=24% Similarity=0.413 Sum_probs=32.0
Q ss_pred CCEEEECCCHHHHHHHHHHHh---CCCCEEEECCCCC
Q 005056 44 VPVLIVGAGPVGLVLSILLTK---LGIKCSVLEKNKA 77 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar---~Gi~v~liEr~~~ 77 (716)
.+|+|||||++|+++|..|++ .|++|+|||+.+.
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~ 41 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDY 41 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSE
T ss_pred CcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCC
Confidence 589999999999999999999 8999999999874
No 158
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.98 E-value=4.3e-05 Score=85.36 Aligned_cols=36 Identities=25% Similarity=0.405 Sum_probs=33.1
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCC
Q 005056 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (716)
Q Consensus 41 ~~~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~ 76 (716)
..++||+||||||+|+++|+.|+++|.+|+||||.+
T Consensus 4 ~~~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~~ 39 (488)
T 3dgz_A 4 QQSFDLLVIGGGSGGLACAKEAAQLGKKVAVADYVE 39 (488)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEEecc
Confidence 346999999999999999999999999999999854
No 159
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=97.96 E-value=9.5e-06 Score=88.50 Aligned_cols=37 Identities=22% Similarity=0.371 Sum_probs=33.2
Q ss_pred ccCCEEEECCCHHHHHHHHHHHhCCCC--EEEECCCCCC
Q 005056 42 AVVPVLIVGAGPVGLVLSILLTKLGIK--CSVLEKNKAF 78 (716)
Q Consensus 42 ~~~dVlIVGaGpaGLt~Al~Lar~Gi~--v~liEr~~~~ 78 (716)
+++||+||||||+|+++|..|+++|.+ |+|||+.+..
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~~~ 44 (408)
T 2gqw_A 6 LKAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAER 44 (408)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSCSC
T ss_pred CCCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCCCC
Confidence 458999999999999999999999984 9999998653
No 160
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.96 E-value=1.4e-05 Score=85.85 Aligned_cols=34 Identities=32% Similarity=0.485 Sum_probs=31.9
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCC
Q 005056 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~ 78 (716)
.||+||||||+|+++|..|+++| +|+|||+.+..
T Consensus 9 ~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~~~ 42 (367)
T 1xhc_A 9 SKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEPVP 42 (367)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSSSC
T ss_pred CcEEEECCcHHHHHHHHHHhhcC-CEEEEECCCCC
Confidence 69999999999999999999999 99999998754
No 161
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=97.96 E-value=1.9e-05 Score=87.64 Aligned_cols=35 Identities=26% Similarity=0.525 Sum_probs=33.1
Q ss_pred ccCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCC
Q 005056 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (716)
Q Consensus 42 ~~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~ 76 (716)
.++||+||||||+|+++|..|++.|.+|+|||+.+
T Consensus 5 ~~~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~~ 39 (464)
T 2eq6_A 5 KTYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGE 39 (464)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 36899999999999999999999999999999976
No 162
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=97.95 E-value=1.4e-05 Score=89.47 Aligned_cols=34 Identities=21% Similarity=0.488 Sum_probs=32.3
Q ss_pred cCCEEEECCCHHHHHHHHHHHhC---CCCEEEECCCC
Q 005056 43 VVPVLIVGAGPVGLVLSILLTKL---GIKCSVLEKNK 76 (716)
Q Consensus 43 ~~dVlIVGaGpaGLt~Al~Lar~---Gi~v~liEr~~ 76 (716)
++||+||||||+|+++|..|+++ |++|+||||.+
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~ 38 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDG 38 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCC
Confidence 47999999999999999999999 99999999986
No 163
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=97.94 E-value=8.5e-05 Score=82.65 Aligned_cols=104 Identities=19% Similarity=0.346 Sum_probs=76.6
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCCCCCCCeeeeChhHHHHHHhhhchHHHHHhcCCCccccceeEEee
Q 005056 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCT 122 (716)
Q Consensus 43 ~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~~~~p~a~~i~~rtmeilr~l~Gl~~~l~~~~~~~~~~~~~~~~~ 122 (716)
.-+|+|||||++|+-+|..|++.|.+|+|+|+.+.+.+. + +
T Consensus 183 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~----------------~-~---------------------- 223 (478)
T 1v59_A 183 PKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIGAS----------------M-D---------------------- 223 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSSS----------------S-C----------------------
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCccccc----------------c-C----------------------
Confidence 358999999999999999999999999999998743210 0 0
Q ss_pred cCCCCceeeccCCCccccccccCCccccccChHHHHHHHHHHHHhcCceeecccccccccccccccceEEeCcEEEEEEe
Q 005056 123 SVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSA 202 (716)
Q Consensus 123 ~~~g~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~l~~~~~~~~~v~~g~~v~~i~~ 202 (716)
..+...|.+.+++.|+ ++++++++++++.
T Consensus 224 --------------------------------~~~~~~l~~~l~~~gv-------------------~i~~~~~v~~i~~ 252 (478)
T 1v59_A 224 --------------------------------GEVAKATQKFLKKQGL-------------------DFKLSTKVISAKR 252 (478)
T ss_dssp --------------------------------HHHHHHHHHHHHHTTC-------------------EEECSEEEEEEEE
T ss_pred --------------------------------HHHHHHHHHHHHHCCC-------------------EEEeCCEEEEEEE
Confidence 1223445556667777 9999999999987
Q ss_pred --cCCeEEEEEEeccCCceeeEEEEecEEEecCCCChh
Q 005056 203 --TDQCINVIASFLKEGKCTERNIQCNILIGTDGAGST 238 (716)
Q Consensus 203 --~~~gv~v~v~~~~~g~~~~~~i~ad~VVgADG~~S~ 238 (716)
+++.+.+++....+|+ ..++.+|.||.|.|....
T Consensus 253 ~~~~~~~~v~~~~~~~g~--~~~~~~D~vv~a~G~~p~ 288 (478)
T 1v59_A 253 NDDKNVVEIVVEDTKTNK--QENLEAEVLLVAVGRRPY 288 (478)
T ss_dssp ETTTTEEEEEEEETTTTE--EEEEEESEEEECSCEEEC
T ss_pred ecCCCeEEEEEEEcCCCC--ceEEECCEEEECCCCCcC
Confidence 5566666654322332 247899999999997654
No 164
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=97.92 E-value=2e-05 Score=85.91 Aligned_cols=35 Identities=23% Similarity=0.359 Sum_probs=32.4
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCC--EEEECCCCCC
Q 005056 44 VPVLIVGAGPVGLVLSILLTKLGIK--CSVLEKNKAF 78 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar~Gi~--v~liEr~~~~ 78 (716)
.+|+||||||+|+++|..|+++|.+ |+|||+.+..
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~~~ 39 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPHL 39 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSSSS
T ss_pred CCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCCCC
Confidence 4899999999999999999999988 9999998764
No 165
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=97.89 E-value=1.4e-05 Score=85.75 Aligned_cols=38 Identities=42% Similarity=0.570 Sum_probs=34.4
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCCEEEECCC-CCC
Q 005056 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKN-KAF 78 (716)
Q Consensus 41 ~~~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~-~~~ 78 (716)
....+|+|||||++||++|+.|+++|++|+|+|++ ..+
T Consensus 42 ~~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~v 80 (376)
T 2e1m_A 42 GPPKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRV 80 (376)
T ss_dssp CSCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCC
T ss_pred CCCceEEEECCCHHHHHHHHHHHHCCCcEEEEecccccc
Confidence 45689999999999999999999999999999998 543
No 166
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=97.89 E-value=1.7e-05 Score=86.98 Aligned_cols=35 Identities=20% Similarity=0.395 Sum_probs=32.4
Q ss_pred CCEEEECCCHHHHHHHHHHHh--CCCCEEEECCCCCC
Q 005056 44 VPVLIVGAGPVGLVLSILLTK--LGIKCSVLEKNKAF 78 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar--~Gi~v~liEr~~~~ 78 (716)
.+|+|||||++|+++|..|++ .|++|+|||+++..
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~ 39 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYF 39 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEE
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCC
Confidence 589999999999999999999 89999999998653
No 167
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=97.87 E-value=7e-06 Score=92.42 Aligned_cols=40 Identities=35% Similarity=0.481 Sum_probs=35.3
Q ss_pred CCCccCCEEEECCCHHHHHHHHHHHhCC-CCEEEECCCCCC
Q 005056 39 SNEAVVPVLIVGAGPVGLVLSILLTKLG-IKCSVLEKNKAF 78 (716)
Q Consensus 39 ~~~~~~dVlIVGaGpaGLt~Al~Lar~G-i~v~liEr~~~~ 78 (716)
+++.+.||+|||||++||++|..|+++| ++|+|+|++..+
T Consensus 4 ~~~~~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~ri 44 (516)
T 1rsg_A 4 VSPAKKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRV 44 (516)
T ss_dssp --CEEEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSS
T ss_pred CCCCCCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCC
Confidence 3456689999999999999999999999 999999999865
No 168
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=97.87 E-value=2.9e-05 Score=85.51 Aligned_cols=34 Identities=21% Similarity=0.378 Sum_probs=30.8
Q ss_pred CEEEECCCHHHHHHHHHHHhCC--CCEEEECCCCCC
Q 005056 45 PVLIVGAGPVGLVLSILLTKLG--IKCSVLEKNKAF 78 (716)
Q Consensus 45 dVlIVGaGpaGLt~Al~Lar~G--i~v~liEr~~~~ 78 (716)
+|+||||||+|+++|..|+++| .+|+||||.+..
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~~~ 37 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDM 37 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHHCSSSCEEEEESSSCS
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCCCC
Confidence 6999999999999999999998 579999998754
No 169
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=97.87 E-value=2.3e-05 Score=84.63 Aligned_cols=35 Identities=23% Similarity=0.387 Sum_probs=31.4
Q ss_pred ccCCEEEECCCHHHHHHHHHHHhCC--CCEEEECCCC
Q 005056 42 AVVPVLIVGAGPVGLVLSILLTKLG--IKCSVLEKNK 76 (716)
Q Consensus 42 ~~~dVlIVGaGpaGLt~Al~Lar~G--i~v~liEr~~ 76 (716)
.++||+||||||+|+++|..|+++| ++|+|+|++.
T Consensus 3 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~ 39 (384)
T 2v3a_A 3 ERAPLVIIGTGLAGYNLAREWRKLDGETPLLMITADD 39 (384)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSSC
T ss_pred CCCcEEEECChHHHHHHHHHHHhhCCCCCEEEEECCC
Confidence 3489999999999999999999999 6799999875
No 170
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.82 E-value=0.00012 Score=81.01 Aligned_cols=101 Identities=17% Similarity=0.347 Sum_probs=75.9
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCCCCCCCeeeeChhHHHHHHhhhchHHHHHhcCCCccccceeEEee
Q 005056 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCT 122 (716)
Q Consensus 43 ~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~~~~p~a~~i~~rtmeilr~l~Gl~~~l~~~~~~~~~~~~~~~~~ 122 (716)
.-+|+|||||++|+-+|..|++.|.+|+|+|+.+.+.+. +
T Consensus 170 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~----------------~------------------------ 209 (455)
T 1ebd_A 170 PKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEILSG----------------F------------------------ 209 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT----------------S------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccccc----------------c------------------------
Confidence 368999999999999999999999999999988653200 0
Q ss_pred cCCCCceeeccCCCccccccccCCccccccChHHHHHHHHHHHHhcCceeecccccccccccccccceEEeCcEEEEEEe
Q 005056 123 SVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSA 202 (716)
Q Consensus 123 ~~~g~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~l~~~~~~~~~v~~g~~v~~i~~ 202 (716)
...+...|.+.+++.|+ ++++++++++++.
T Consensus 210 -------------------------------~~~~~~~l~~~l~~~gv-------------------~i~~~~~v~~i~~ 239 (455)
T 1ebd_A 210 -------------------------------EKQMAAIIKKRLKKKGV-------------------EVVTNALAKGAEE 239 (455)
T ss_dssp -------------------------------CHHHHHHHHHHHHHTTC-------------------EEEESEEEEEEEE
T ss_pred -------------------------------CHHHHHHHHHHHHHCCC-------------------EEEeCCEEEEEEE
Confidence 01123345556667777 9999999999998
Q ss_pred cCCeEEEEEEeccCCceeeEEEEecEEEecCCCCh
Q 005056 203 TDQCINVIASFLKEGKCTERNIQCNILIGTDGAGS 237 (716)
Q Consensus 203 ~~~gv~v~v~~~~~g~~~~~~i~ad~VVgADG~~S 237 (716)
+++++.+++.. +|+ ..++.+|.||.|.|.+.
T Consensus 240 ~~~~~~v~~~~--~g~--~~~~~~D~vv~a~G~~p 270 (455)
T 1ebd_A 240 REDGVTVTYEA--NGE--TKTIDADYVLVTVGRRP 270 (455)
T ss_dssp ETTEEEEEEEE--TTE--EEEEEESEEEECSCEEE
T ss_pred eCCeEEEEEEe--CCc--eeEEEcCEEEECcCCCc
Confidence 87777666542 332 24789999999999754
No 171
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=97.82 E-value=7.6e-05 Score=82.41 Aligned_cols=99 Identities=18% Similarity=0.213 Sum_probs=73.4
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCCCCCCCeeeeChhHHHHHHhhhchHHHHHhcCCCccccceeEEee
Q 005056 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCT 122 (716)
Q Consensus 43 ~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~~~~p~a~~i~~rtmeilr~l~Gl~~~l~~~~~~~~~~~~~~~~~ 122 (716)
.-+|+|||||++|+-+|..|++.|.+|+|+|+.+.+.. .+ .
T Consensus 167 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~----------------~~-~---------------------- 207 (450)
T 1ges_A 167 PERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPLP----------------SF-D---------------------- 207 (450)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST----------------TS-C----------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCchhh----------------hh-h----------------------
Confidence 35899999999999999999999999999998764310 00 0
Q ss_pred cCCCCceeeccCCCccccccccCCccccccChHHHHHHHHHHHHhcCceeecccccccccccccccceEEeCcEEEEEEe
Q 005056 123 SVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSA 202 (716)
Q Consensus 123 ~~~g~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~l~~~~~~~~~v~~g~~v~~i~~ 202 (716)
..+...|.+.+++.|+ ++++++++++++.
T Consensus 208 --------------------------------~~~~~~l~~~l~~~Gv-------------------~i~~~~~v~~i~~ 236 (450)
T 1ges_A 208 --------------------------------PMISETLVEVMNAEGP-------------------QLHTNAIPKAVVK 236 (450)
T ss_dssp --------------------------------HHHHHHHHHHHHHHSC-------------------EEECSCCEEEEEE
T ss_pred --------------------------------HHHHHHHHHHHHHCCC-------------------EEEeCCEEEEEEE
Confidence 0123345555666676 9999999999988
Q ss_pred cCCe-EEEEEEeccCCceeeEEEEecEEEecCCCChh
Q 005056 203 TDQC-INVIASFLKEGKCTERNIQCNILIGTDGAGST 238 (716)
Q Consensus 203 ~~~g-v~v~v~~~~~g~~~~~~i~ad~VVgADG~~S~ 238 (716)
++++ +.+++. +|+ ++.+|.||.|.|.++.
T Consensus 237 ~~~~~~~v~~~---~g~----~i~~D~vv~a~G~~p~ 266 (450)
T 1ges_A 237 NTDGSLTLELE---DGR----SETVDCLIWAIGREPA 266 (450)
T ss_dssp CTTSCEEEEET---TSC----EEEESEEEECSCEEES
T ss_pred eCCcEEEEEEC---CCc----EEEcCEEEECCCCCcC
Confidence 7654 555443 453 6899999999997653
No 172
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=97.80 E-value=0.00016 Score=80.22 Aligned_cols=105 Identities=19% Similarity=0.333 Sum_probs=76.8
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCCCCCCCeeeeChhHHHHHHhhhchHHHHHhcCCCccccceeEEee
Q 005056 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCT 122 (716)
Q Consensus 43 ~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~~~~p~a~~i~~rtmeilr~l~Gl~~~l~~~~~~~~~~~~~~~~~ 122 (716)
.-+|+|||||++|+-+|..|++.|.+|+|+|+.+.+.+. .+
T Consensus 178 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~---------------~~------------------------ 218 (474)
T 1zmd_A 178 PEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGV---------------GI------------------------ 218 (474)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSCS---------------SC------------------------
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCccCCc---------------cc------------------------
Confidence 358999999999999999999999999999998753211 00
Q ss_pred cCCCCceeeccCCCccccccccCCccccccChHHHHHHHHHHHHhcCceeecccccccccccccccceEEeCcEEEEEEe
Q 005056 123 SVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSA 202 (716)
Q Consensus 123 ~~~g~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~l~~~~~~~~~v~~g~~v~~i~~ 202 (716)
...+...|.+.+++.|+ ++++++++++++.
T Consensus 219 -------------------------------~~~~~~~l~~~l~~~Gv-------------------~i~~~~~v~~i~~ 248 (474)
T 1zmd_A 219 -------------------------------DMEISKNFQRILQKQGF-------------------KFKLNTKVTGATK 248 (474)
T ss_dssp -------------------------------CHHHHHHHHHHHHHTTC-------------------EEECSEEEEEEEE
T ss_pred -------------------------------CHHHHHHHHHHHHHCCC-------------------EEEeCceEEEEEE
Confidence 01123345566677777 9999999999998
Q ss_pred cCCe-EEEEEEeccCCceeeEEEEecEEEecCCCChh
Q 005056 203 TDQC-INVIASFLKEGKCTERNIQCNILIGTDGAGST 238 (716)
Q Consensus 203 ~~~g-v~v~v~~~~~g~~~~~~i~ad~VVgADG~~S~ 238 (716)
++++ +.+++....+++ ..++.+|.||.|.|....
T Consensus 249 ~~~~~~~v~~~~~~~~~--~~~i~~D~vv~a~G~~p~ 283 (474)
T 1zmd_A 249 KSDGKIDVSIEAASGGK--AEVITCDVLLVCIGRRPF 283 (474)
T ss_dssp CTTSCEEEEEEETTSCC--CEEEEESEEEECSCEEEC
T ss_pred cCCceEEEEEEecCCCC--ceEEEcCEEEECcCCCcC
Confidence 7766 666654221222 247899999999997643
No 173
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=97.79 E-value=0.0002 Score=79.20 Aligned_cols=141 Identities=12% Similarity=0.124 Sum_probs=85.3
Q ss_pred cCCEEEECCCHHHHHHHHHHHhC--CCCEEEECCCCCCCCCCC----eeeeChhHHHHHHhhhchH--HHHHhcCCCccc
Q 005056 43 VVPVLIVGAGPVGLVLSILLTKL--GIKCSVLEKNKAFSTHPQ----AHFINNRYALVFRKLDGLA--EEIERSQPPVDL 114 (716)
Q Consensus 43 ~~dVlIVGaGpaGLt~Al~Lar~--Gi~v~liEr~~~~~~~p~----a~~i~~rtmeilr~l~Gl~--~~l~~~~~~~~~ 114 (716)
..+|+|||||.+|+=+|..|++. |.+|++++|.+...+... ...+++...+.+..+ .-. ..+.+.....
T Consensus 227 ~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~~~p~~~~~~~~~~~~p~~~~~~~~l-~~~~~~~~~~~~~~~-- 303 (463)
T 3s5w_A 227 PMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASALKPADDSPFVNEVFAPKFTDLIYSR-EHAERERLLREYHNT-- 303 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSSCCBCCCCHHHHGGGSHHHHHHHHHS-CHHHHHHHHHHTGGG--
T ss_pred CCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCCCcCccCCccchhccChhHHHHHhcC-CHHHHHHHHHHhhcc--
Confidence 45899999999999999999999 999999999986533211 122344444555444 111 1111100000
Q ss_pred cceeEEeecCCCCceeeccCCCccccccccCCccccccChHHHHHHHHHHHHh-cCceeecccccccccccccccceEEe
Q 005056 115 WRKFIYCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEK-LNFKICTSEGTEGLHNHLLQGREILM 193 (716)
Q Consensus 115 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~-~g~~~~~~~~~~~l~~~~~~~~~v~~ 193 (716)
.+.. ..+ .+.....+.+..+.+.. .+ +++++
T Consensus 304 ------------------------~~~~-~~~----~~~~~~~~~l~~~~~~~~~~-------------------v~i~~ 335 (463)
T 3s5w_A 304 ------------------------NYSV-VDT----DLIERIYGVFYRQKVSGIPR-------------------HAFRC 335 (463)
T ss_dssp ------------------------TSSC-BCH----HHHHHHHHHHHHHHHHCCCC-------------------SEEET
T ss_pred ------------------------CCCc-CCH----HHHHHHHHHHHHHHhcCCCC-------------------eEEEe
Confidence 0000 000 00011122222233322 23 49999
Q ss_pred CcEEEEEEecCCeEEEEEEeccCCceeeEEEEecEEEecCCCC
Q 005056 194 GHECVSVSATDQCINVIASFLKEGKCTERNIQCNILIGTDGAG 236 (716)
Q Consensus 194 g~~v~~i~~~~~gv~v~v~~~~~g~~~~~~i~ad~VVgADG~~ 236 (716)
+++|++++.+++++.+++....+|+ ..++.+|+||-|-|..
T Consensus 336 ~~~v~~v~~~~~~~~v~~~~~~~g~--~~~~~~D~Vv~AtG~~ 376 (463)
T 3s5w_A 336 MTTVERATATAQGIELALRDAGSGE--LSVETYDAVILATGYE 376 (463)
T ss_dssp TEEEEEEEEETTEEEEEEEETTTCC--EEEEEESEEEECCCEE
T ss_pred CCEEEEEEecCCEEEEEEEEcCCCC--eEEEECCEEEEeeCCC
Confidence 9999999998888888887554554 4579999999999965
No 174
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=97.79 E-value=0.00011 Score=82.01 Aligned_cols=33 Identities=21% Similarity=0.392 Sum_probs=31.3
Q ss_pred ccCCEEEECCCHHHHHHHHHHHh-CCCCEEEECC
Q 005056 42 AVVPVLIVGAGPVGLVLSILLTK-LGIKCSVLEK 74 (716)
Q Consensus 42 ~~~dVlIVGaGpaGLt~Al~Lar-~Gi~v~liEr 74 (716)
.++||+||||||+|+++|+.|++ .|++|+|||+
T Consensus 6 ~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~ 39 (495)
T 2wpf_A 6 KAFDLVVIGAGSGGLEAGWNAATLYGKRVAVVDV 39 (495)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHHCCCEEEEES
T ss_pred cccCEEEECCChhHHHHHHHHHHhcCCeEEEEec
Confidence 46899999999999999999999 9999999995
No 175
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=97.78 E-value=2.5e-05 Score=87.39 Aligned_cols=37 Identities=27% Similarity=0.539 Sum_probs=33.5
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCC
Q 005056 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (716)
Q Consensus 41 ~~~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~ 78 (716)
...+||+||||||+||++|+.|+++ .+|+|||+.+.+
T Consensus 106 ~~~~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~~~ 142 (493)
T 1y56_A 106 RVVVDVAIIGGGPAGIGAALELQQY-LTVALIEERGWL 142 (493)
T ss_dssp EEEESCCEECCSHHHHHHHHHHTTT-CCEEEECTTSSS
T ss_pred cccCCEEEECccHHHHHHHHHHHhc-CCEEEEeCCCCC
Confidence 3457999999999999999999999 999999998754
No 176
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=97.75 E-value=2.3e-05 Score=85.58 Aligned_cols=37 Identities=30% Similarity=0.571 Sum_probs=34.4
Q ss_pred ccCCEEEECCCHHHHHHHHHHHhCC-CCEEEECCCCCC
Q 005056 42 AVVPVLIVGAGPVGLVLSILLTKLG-IKCSVLEKNKAF 78 (716)
Q Consensus 42 ~~~dVlIVGaGpaGLt~Al~Lar~G-i~v~liEr~~~~ 78 (716)
.+.||+|||||++||++|+.|+++| ++|+|+|+++.+
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~ 42 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHV 42 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCS
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCC
Confidence 4579999999999999999999999 999999998765
No 177
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=97.75 E-value=2e-05 Score=85.67 Aligned_cols=37 Identities=24% Similarity=0.392 Sum_probs=34.3
Q ss_pred ccCCEEEECCCHHHHHHHHHHHhC-CCCEEEECCCCCC
Q 005056 42 AVVPVLIVGAGPVGLVLSILLTKL-GIKCSVLEKNKAF 78 (716)
Q Consensus 42 ~~~dVlIVGaGpaGLt~Al~Lar~-Gi~v~liEr~~~~ 78 (716)
.++||+|||||++||++|..|+++ |++|+|+|+++.+
T Consensus 6 ~~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~ 43 (399)
T 1v0j_A 6 ARFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHI 43 (399)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSS
T ss_pred ccCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCC
Confidence 468999999999999999999999 9999999999754
No 178
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=97.72 E-value=4e-05 Score=84.09 Aligned_cols=33 Identities=21% Similarity=0.393 Sum_probs=30.3
Q ss_pred CEEEECCCHHHHHHHHHHHhCC--CCEEEECCCCC
Q 005056 45 PVLIVGAGPVGLVLSILLTKLG--IKCSVLEKNKA 77 (716)
Q Consensus 45 dVlIVGaGpaGLt~Al~Lar~G--i~v~liEr~~~ 77 (716)
+|+|||||++|+++|..|++.+ ++|+|||+++.
T Consensus 4 ~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~ 38 (430)
T 3hyw_A 4 HVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPY 38 (430)
T ss_dssp EEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSE
T ss_pred cEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCC
Confidence 6999999999999999999876 89999998864
No 179
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.72 E-value=0.00016 Score=80.25 Aligned_cols=103 Identities=17% Similarity=0.348 Sum_probs=76.5
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCCCCCCCeeeeChhHHHHHHhhhchHHHHHhcCCCccccceeEEee
Q 005056 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCT 122 (716)
Q Consensus 43 ~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~~~~p~a~~i~~rtmeilr~l~Gl~~~l~~~~~~~~~~~~~~~~~ 122 (716)
.-+|+|||||++|+-+|..|++.|.+|+|+|+.+.+.+. +
T Consensus 177 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~~----------------~------------------------ 216 (470)
T 1dxl_A 177 PKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEIVPT----------------M------------------------ 216 (470)
T ss_dssp CSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSSSSTT----------------S------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccccc----------------c------------------------
Confidence 358999999999999999999999999999998653210 0
Q ss_pred cCCCCceeeccCCCccccccccCCccccccChHHHHHHHHHHHHhcCceeecccccccccccccccceEEeCcEEEEEEe
Q 005056 123 SVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSA 202 (716)
Q Consensus 123 ~~~g~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~l~~~~~~~~~v~~g~~v~~i~~ 202 (716)
...+...|.+.+++.|+ ++++++++++++.
T Consensus 217 -------------------------------~~~~~~~l~~~l~~~gv-------------------~i~~~~~v~~i~~ 246 (470)
T 1dxl_A 217 -------------------------------DAEIRKQFQRSLEKQGM-------------------KFKLKTKVVGVDT 246 (470)
T ss_dssp -------------------------------CHHHHHHHHHHHHHSSC-------------------CEECSEEEEEEEC
T ss_pred -------------------------------cHHHHHHHHHHHHHcCC-------------------EEEeCCEEEEEEE
Confidence 01123345556667777 8999999999998
Q ss_pred cCCeEEEEEEeccCCceeeEEEEecEEEecCCCCh
Q 005056 203 TDQCINVIASFLKEGKCTERNIQCNILIGTDGAGS 237 (716)
Q Consensus 203 ~~~gv~v~v~~~~~g~~~~~~i~ad~VVgADG~~S 237 (716)
+++++.+++....+|+ ..++.+|.||.|.|...
T Consensus 247 ~~~~~~v~~~~~~~g~--~~~~~~D~vv~a~G~~p 279 (470)
T 1dxl_A 247 SGDGVKLTVEPSAGGE--QTIIEADVVLVSAGRTP 279 (470)
T ss_dssp SSSSEEEEEEESSSCC--CEEEEESEEECCCCEEE
T ss_pred cCCeEEEEEEecCCCc--ceEEECCEEEECCCCCc
Confidence 7777776665322332 24789999999999764
No 180
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=97.71 E-value=2.5e-05 Score=84.55 Aligned_cols=39 Identities=28% Similarity=0.388 Sum_probs=35.2
Q ss_pred CCccCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCC
Q 005056 40 NEAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (716)
Q Consensus 40 ~~~~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~ 78 (716)
....+||+|||||++||++|+.|+++|++|+|+|+++..
T Consensus 26 ~~~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~ 64 (397)
T 3hdq_A 26 ESKGFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHI 64 (397)
T ss_dssp CCCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred cCCCCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCC
Confidence 345689999999999999999999999999999998754
No 181
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=97.69 E-value=2e-05 Score=87.38 Aligned_cols=33 Identities=24% Similarity=0.391 Sum_probs=31.7
Q ss_pred ccCCEEEECCCHHHHHHHHHHHhCCCCEEEECC
Q 005056 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEK 74 (716)
Q Consensus 42 ~~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr 74 (716)
.++||+||||||+||++|+.|+++|++|+||||
T Consensus 4 ~~~DVvVIGaG~aGl~aA~~la~~G~~V~liEk 36 (463)
T 4dna_A 4 FDYDLFVIGGGSGGVRSGRLAAALGKKVAIAEE 36 (463)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTTTCCEEEEES
T ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCEEEEEeC
Confidence 458999999999999999999999999999999
No 182
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=97.68 E-value=0.00019 Score=79.45 Aligned_cols=98 Identities=19% Similarity=0.276 Sum_probs=73.2
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCCCCCCCeeeeChhHHHHHHhhhchHHHHHhcCCCccccceeEEeec
Q 005056 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCTS 123 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~~~~p~a~~i~~rtmeilr~l~Gl~~~l~~~~~~~~~~~~~~~~~~ 123 (716)
-+|+|||||++|+-+|..|++.|.+|+|+|+.+.+.. .+ +
T Consensus 167 ~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~l~----------------~~-~----------------------- 206 (463)
T 2r9z_A 167 KRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLLF----------------QF-D----------------------- 206 (463)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST----------------TS-C-----------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCcccc----------------cc-C-----------------------
Confidence 5799999999999999999999999999998864310 00 0
Q ss_pred CCCCceeeccCCCccccccccCCccccccChHHHHHHHHHHHHhcCceeecccccccccccccccceEEeCcEEEEEEec
Q 005056 124 VTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSAT 203 (716)
Q Consensus 124 ~~g~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~l~~~~~~~~~v~~g~~v~~i~~~ 203 (716)
..+...|.+.+++.|+ ++++++++++++.+
T Consensus 207 -------------------------------~~~~~~l~~~l~~~gv-------------------~i~~~~~v~~i~~~ 236 (463)
T 2r9z_A 207 -------------------------------PLLSATLAENMHAQGI-------------------ETHLEFAVAALERD 236 (463)
T ss_dssp -------------------------------HHHHHHHHHHHHHTTC-------------------EEESSCCEEEEEEE
T ss_pred -------------------------------HHHHHHHHHHHHHCCC-------------------EEEeCCEEEEEEEe
Confidence 0112334555666776 99999999999987
Q ss_pred CCeEEEEEEeccCCceeeEEEEecEEEecCCCCh
Q 005056 204 DQCINVIASFLKEGKCTERNIQCNILIGTDGAGS 237 (716)
Q Consensus 204 ~~gv~v~v~~~~~g~~~~~~i~ad~VVgADG~~S 237 (716)
++++.+++. +|+ . ++.+|.||.|.|.+.
T Consensus 237 ~~~~~v~~~---~G~--~-~i~~D~vv~a~G~~p 264 (463)
T 2r9z_A 237 AQGTTLVAQ---DGT--R-LEGFDSVIWAVGRAP 264 (463)
T ss_dssp TTEEEEEET---TCC--E-EEEESEEEECSCEEE
T ss_pred CCeEEEEEe---CCc--E-EEEcCEEEECCCCCc
Confidence 777655543 453 2 689999999999764
No 183
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=97.65 E-value=0.00019 Score=79.04 Aligned_cols=37 Identities=24% Similarity=0.390 Sum_probs=33.5
Q ss_pred ccCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCC
Q 005056 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (716)
Q Consensus 42 ~~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~ 78 (716)
...+|+|||||++|+.+|..|++.|.+|+|+|+.+.+
T Consensus 148 ~~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~ 184 (447)
T 1nhp_A 148 EVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRP 184 (447)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSST
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCccc
Confidence 3468999999999999999999999999999998743
No 184
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=97.64 E-value=0.00027 Score=78.71 Aligned_cols=102 Identities=20% Similarity=0.247 Sum_probs=75.3
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCCCCCCCeeeeChhHHHHHHhhhchHHHHHhcCCCccccceeEEee
Q 005056 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCT 122 (716)
Q Consensus 43 ~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~~~~p~a~~i~~rtmeilr~l~Gl~~~l~~~~~~~~~~~~~~~~~ 122 (716)
.-+|+|||||++|+-+|..|++.|.+|+|+|+.+.+.+. +
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~~l~~----------------~------------------------ 224 (482)
T 1ojt_A 185 PGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLMQG----------------A------------------------ 224 (482)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSSSSTT----------------S------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccccc----------------c------------------------
Confidence 458999999999999999999999999999987643110 0
Q ss_pred cCCCCceeeccCCCccccccccCCccccccChHHHHHHHHHHHHhcCceeecccccccccccccccceEEeCcEEEEEEe
Q 005056 123 SVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSA 202 (716)
Q Consensus 123 ~~~g~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~l~~~~~~~~~v~~g~~v~~i~~ 202 (716)
...+...|.+.+++.|+ ++++++++++++.
T Consensus 225 -------------------------------~~~~~~~l~~~l~~~gV-------------------~i~~~~~v~~i~~ 254 (482)
T 1ojt_A 225 -------------------------------DRDLVKVWQKQNEYRFD-------------------NIMVNTKTVAVEP 254 (482)
T ss_dssp -------------------------------CHHHHHHHHHHHGGGEE-------------------EEECSCEEEEEEE
T ss_pred -------------------------------CHHHHHHHHHHHHhcCC-------------------EEEECCEEEEEEE
Confidence 01123345555666676 9999999999998
Q ss_pred cCCeEEEEEEeccC-CceeeEEEEecEEEecCCCChh
Q 005056 203 TDQCINVIASFLKE-GKCTERNIQCNILIGTDGAGST 238 (716)
Q Consensus 203 ~~~gv~v~v~~~~~-g~~~~~~i~ad~VVgADG~~S~ 238 (716)
+++++.+++.+..+ |+ ++.+|.||.|-|.+..
T Consensus 255 ~~~~~~v~~~~~~~~g~----~~~~D~vv~a~G~~p~ 287 (482)
T 1ojt_A 255 KEDGVYVTFEGANAPKE----PQRYDAVLVAAGRAPN 287 (482)
T ss_dssp ETTEEEEEEESSSCCSS----CEEESCEEECCCEEEC
T ss_pred cCCeEEEEEeccCCCce----EEEcCEEEECcCCCcC
Confidence 87777666652111 32 5789999999997754
No 185
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=97.63 E-value=6.7e-05 Score=83.82 Aligned_cols=38 Identities=34% Similarity=0.440 Sum_probs=34.8
Q ss_pred ccCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCCC
Q 005056 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFS 79 (716)
Q Consensus 42 ~~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~~ 79 (716)
...||+|||||++||++|..|+++|++|+|+|+++.+.
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~g 69 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPG 69 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSB
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCC
Confidence 45799999999999999999999999999999987653
No 186
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=97.63 E-value=3.7e-05 Score=85.73 Aligned_cols=38 Identities=34% Similarity=0.496 Sum_probs=34.7
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCC-CCEEEECCCCCC
Q 005056 41 EAVVPVLIVGAGPVGLVLSILLTKLG-IKCSVLEKNKAF 78 (716)
Q Consensus 41 ~~~~dVlIVGaGpaGLt~Al~Lar~G-i~v~liEr~~~~ 78 (716)
++.+||+|||||++||++|+.|+++| .+|+|+|+++.+
T Consensus 7 ~~~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~ 45 (484)
T 4dsg_A 7 LLTPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTP 45 (484)
T ss_dssp CCSCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSS
T ss_pred ccCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCC
Confidence 45689999999999999999999999 799999999755
No 187
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=97.62 E-value=0.00042 Score=72.12 Aligned_cols=100 Identities=14% Similarity=0.209 Sum_probs=72.2
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCCCCCCCeeeeChhHHHHHHhhhchHHHHHhcCCCccccceeEEeec
Q 005056 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCTS 123 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~~~~p~a~~i~~rtmeilr~l~Gl~~~l~~~~~~~~~~~~~~~~~~ 123 (716)
-+|+|||+|++|+-+|..|++.|.+|+++++.+.... .
T Consensus 146 ~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~-------~----------------------------------- 183 (320)
T 1trb_A 146 QKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGFRA-------E----------------------------------- 183 (320)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCC-------C-----------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCcccc-------C-----------------------------------
Confidence 5799999999999999999999999999998764310 0
Q ss_pred CCCCceeeccCCCccccccccCCccccccChHHHHHHHHHHHHhcCceeecccccccccccccccceEEeCcEEEEEEec
Q 005056 124 VTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSAT 203 (716)
Q Consensus 124 ~~g~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~l~~~~~~~~~v~~g~~v~~i~~~ 203 (716)
..+...|.+.+++.|+ ++++++++++++.+
T Consensus 184 -------------------------------~~~~~~l~~~l~~~gv-------------------~i~~~~~v~~i~~~ 213 (320)
T 1trb_A 184 -------------------------------KILIKRLMDKVENGNI-------------------ILHTNRTLEEVTGD 213 (320)
T ss_dssp -------------------------------HHHHHHHHHHHHTSSE-------------------EEECSCEEEEEEEC
T ss_pred -------------------------------HHHHHHHHHhcccCCe-------------------EEEcCceeEEEEcC
Confidence 0112234445566676 99999999999887
Q ss_pred CCeEE-EEEEeccC-CceeeEEEEecEEEecCCCCh
Q 005056 204 DQCIN-VIASFLKE-GKCTERNIQCNILIGTDGAGS 237 (716)
Q Consensus 204 ~~gv~-v~v~~~~~-g~~~~~~i~ad~VVgADG~~S 237 (716)
++.++ +++.+..+ |+ ..++.+|.||.|-|...
T Consensus 214 ~~~v~~v~~~~~~~~g~--~~~i~~D~vv~a~G~~p 247 (320)
T 1trb_A 214 QMGVTGVRLRDTQNSDN--IESLDVAGLFVAIGHSP 247 (320)
T ss_dssp SSSEEEEEEECCTTCCC--CEEEECSEEEECSCEEE
T ss_pred CCceEEEEEEeccCCCc--eEEEEcCEEEEEeCCCC
Confidence 65543 55542212 32 34789999999999653
No 188
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=97.62 E-value=2.3e-05 Score=87.62 Aligned_cols=35 Identities=26% Similarity=0.259 Sum_probs=32.8
Q ss_pred ccCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCC
Q 005056 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (716)
Q Consensus 42 ~~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~ 76 (716)
.++||+||||||+|+++|+.|+++|.+|+||||.+
T Consensus 7 ~~~DvvVIGgG~aGl~aA~~la~~G~~V~liE~~~ 41 (492)
T 3ic9_A 7 INVDVAIIGTGTAGMGAYRAAKKHTDKVVLIEGGA 41 (492)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTTCSCEEEEESSC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 45899999999999999999999999999999964
No 189
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=97.61 E-value=0.0004 Score=76.97 Aligned_cols=102 Identities=19% Similarity=0.370 Sum_probs=75.1
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCCCCCCCeeeeChhHHHHHHhhhchHHHHHhcCCCccccceeEEee
Q 005056 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCT 122 (716)
Q Consensus 43 ~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~~~~p~a~~i~~rtmeilr~l~Gl~~~l~~~~~~~~~~~~~~~~~ 122 (716)
.-.|+|||||++|+-+|..|++.|.+|+|+|+.+...+. +
T Consensus 174 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~----------------~------------------------ 213 (468)
T 2qae_A 174 PKTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRCAPT----------------L------------------------ 213 (468)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT----------------S------------------------
T ss_pred CceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCccccc----------------C------------------------
Confidence 358999999999999999999999999999988653210 0
Q ss_pred cCCCCceeeccCCCccccccccCCccccccChHHHHHHHHHHH-HhcCceeecccccccccccccccceEEeCcEEEEEE
Q 005056 123 SVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQL-EKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVS 201 (716)
Q Consensus 123 ~~~g~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~-~~~g~~~~~~~~~~~l~~~~~~~~~v~~g~~v~~i~ 201 (716)
...+...|.+.+ ++.|+ ++++++++++++
T Consensus 214 -------------------------------d~~~~~~l~~~l~~~~gv-------------------~i~~~~~v~~i~ 243 (468)
T 2qae_A 214 -------------------------------DEDVTNALVGALAKNEKM-------------------KFMTSTKVVGGT 243 (468)
T ss_dssp -------------------------------CHHHHHHHHHHHHHHTCC-------------------EEECSCEEEEEE
T ss_pred -------------------------------CHHHHHHHHHHHhhcCCc-------------------EEEeCCEEEEEE
Confidence 011233455556 66776 999999999999
Q ss_pred ecCCeEEEEEEeccCCceeeEEEEecEEEecCCCCh
Q 005056 202 ATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGS 237 (716)
Q Consensus 202 ~~~~gv~v~v~~~~~g~~~~~~i~ad~VVgADG~~S 237 (716)
.+++++.+++.. .+|+ ..++.+|.||.|.|..+
T Consensus 244 ~~~~~~~v~~~~-~~g~--~~~i~~D~vv~a~G~~p 276 (468)
T 2qae_A 244 NNGDSVSLEVEG-KNGK--RETVTCEALLVSVGRRP 276 (468)
T ss_dssp ECSSSEEEEEEC-C-----EEEEEESEEEECSCEEE
T ss_pred EcCCeEEEEEEc-CCCc--eEEEECCEEEECCCccc
Confidence 877777666542 1342 24789999999999765
No 190
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=97.61 E-value=0.00021 Score=80.56 Aligned_cols=36 Identities=17% Similarity=0.281 Sum_probs=33.5
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCC
Q 005056 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (716)
Q Consensus 43 ~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~ 78 (716)
+|||+||||||+|+++|+.++++|.+|+|||+....
T Consensus 42 dYDviVIG~GpaG~~aA~~aa~~G~kValIE~~~~~ 77 (542)
T 4b1b_A 42 DYDYVVIGGGPGGMASAKEAAAHGARVLLFDYVKPS 77 (542)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEECCCCCC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeccccc
Confidence 489999999999999999999999999999987643
No 191
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=97.59 E-value=9.5e-05 Score=81.19 Aligned_cols=38 Identities=21% Similarity=0.391 Sum_probs=34.9
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCC
Q 005056 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (716)
Q Consensus 41 ~~~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~ 78 (716)
+.++||+|||||++||++|+.|++.|++|+|+|+++.+
T Consensus 4 ~~~~~v~iiG~G~~gl~~a~~l~~~g~~v~~~e~~~~~ 41 (433)
T 1d5t_A 4 DEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYY 41 (433)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCc
Confidence 34589999999999999999999999999999998755
No 192
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=97.58 E-value=0.00057 Score=75.63 Aligned_cols=101 Identities=20% Similarity=0.357 Sum_probs=74.9
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCCCCCCCeeeeChhHHHHHHhhhchHHHHHhcCCCccccceeEEee
Q 005056 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCT 122 (716)
Q Consensus 43 ~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~~~~p~a~~i~~rtmeilr~l~Gl~~~l~~~~~~~~~~~~~~~~~ 122 (716)
.-+|+|||||++|+-+|..|++.|.+|+|+|+.+.+.+. +
T Consensus 171 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~----------------~------------------------ 210 (464)
T 2a8x_A 171 PKSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRALPN----------------E------------------------ 210 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT----------------S------------------------
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCccccc----------------c------------------------
Confidence 358999999999999999999999999999998643110 0
Q ss_pred cCCCCceeeccCCCccccccccCCccccccChHHHHHHHHHHHHhcCceeecccccccccccccccceEEeCcEEEEEEe
Q 005056 123 SVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSA 202 (716)
Q Consensus 123 ~~~g~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~l~~~~~~~~~v~~g~~v~~i~~ 202 (716)
...+...+.+.+++.|+ ++++++++++++.
T Consensus 211 -------------------------------~~~~~~~l~~~l~~~gv-------------------~i~~~~~v~~i~~ 240 (464)
T 2a8x_A 211 -------------------------------DADVSKEIEKQFKKLGV-------------------TILTATKVESIAD 240 (464)
T ss_dssp -------------------------------CHHHHHHHHHHHHHHTC-------------------EEECSCEEEEEEE
T ss_pred -------------------------------CHHHHHHHHHHHHHcCC-------------------EEEeCcEEEEEEE
Confidence 00122335555666676 9999999999998
Q ss_pred cCCeEEEEEEeccCCceeeEEEEecEEEecCCCCh
Q 005056 203 TDQCINVIASFLKEGKCTERNIQCNILIGTDGAGS 237 (716)
Q Consensus 203 ~~~gv~v~v~~~~~g~~~~~~i~ad~VVgADG~~S 237 (716)
+++++.+++. ++|+ ..++.+|.||.|-|...
T Consensus 241 ~~~~~~v~~~--~~g~--~~~~~~D~vv~a~G~~p 271 (464)
T 2a8x_A 241 GGSQVTVTVT--KDGV--AQELKAEKVLQAIGFAP 271 (464)
T ss_dssp CSSCEEEEEE--SSSC--EEEEEESEEEECSCEEE
T ss_pred cCCeEEEEEE--cCCc--eEEEEcCEEEECCCCCc
Confidence 7777666654 2342 24789999999999653
No 193
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=97.58 E-value=0.00037 Score=77.48 Aligned_cols=101 Identities=18% Similarity=0.223 Sum_probs=73.5
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCCCCCCCeeeeChhHHHHHHhhhchHHHHHhcCCCccccceeEEee
Q 005056 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCT 122 (716)
Q Consensus 43 ~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~~~~p~a~~i~~rtmeilr~l~Gl~~~l~~~~~~~~~~~~~~~~~ 122 (716)
.-+|+|||||++|+-+|..|++.|.+|+|+|+.+.+... + .
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~----------------~---d-------------------- 225 (479)
T 2hqm_A 185 PKKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETVLRK----------------F---D-------------------- 225 (479)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSSCTT----------------S---C--------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCccccc----------------c---C--------------------
Confidence 357999999999999999999999999999988653110 0 0
Q ss_pred cCCCCceeeccCCCccccccccCCccccccChHHHHHHHHHHHHhcCceeecccccccccccccccceEEeCcEEEEEEe
Q 005056 123 SVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSA 202 (716)
Q Consensus 123 ~~~g~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~l~~~~~~~~~v~~g~~v~~i~~ 202 (716)
..+...|.+.+++.|+ ++++++++++++.
T Consensus 226 --------------------------------~~~~~~l~~~l~~~Gv-------------------~i~~~~~v~~i~~ 254 (479)
T 2hqm_A 226 --------------------------------ECIQNTITDHYVKEGI-------------------NVHKLSKIVKVEK 254 (479)
T ss_dssp --------------------------------HHHHHHHHHHHHHHTC-------------------EEECSCCEEEEEE
T ss_pred --------------------------------HHHHHHHHHHHHhCCe-------------------EEEeCCEEEEEEE
Confidence 0122334555666676 9999999999987
Q ss_pred cCCe--EEEEEEeccCCceeeEEEEecEEEecCCCChhh
Q 005056 203 TDQC--INVIASFLKEGKCTERNIQCNILIGTDGAGSTV 239 (716)
Q Consensus 203 ~~~g--v~v~v~~~~~g~~~~~~i~ad~VVgADG~~S~V 239 (716)
++++ +.+++. +|+ .++.+|.||.|-|.....
T Consensus 255 ~~~~~~~~v~~~---~G~---~~i~~D~vv~a~G~~p~~ 287 (479)
T 2hqm_A 255 NVETDKLKIHMN---DSK---SIDDVDELIWTIGRKSHL 287 (479)
T ss_dssp CC-CCCEEEEET---TSC---EEEEESEEEECSCEEECC
T ss_pred cCCCcEEEEEEC---CCc---EEEEcCEEEECCCCCCcc
Confidence 6555 555443 452 368999999999976543
No 194
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=97.52 E-value=5.1e-05 Score=82.00 Aligned_cols=36 Identities=28% Similarity=0.469 Sum_probs=33.5
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCC
Q 005056 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (716)
Q Consensus 43 ~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~ 78 (716)
+++|+|||||++||++|..|+++|++|+|+|+++..
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~ 38 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHI 38 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCc
Confidence 479999999999999999999999999999998754
No 195
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=97.51 E-value=0.00028 Score=85.29 Aligned_cols=37 Identities=30% Similarity=0.499 Sum_probs=33.9
Q ss_pred ccCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCC
Q 005056 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (716)
Q Consensus 42 ~~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~ 78 (716)
.++||+||||||+|+++|+.|+++|++|+|||+.+.+
T Consensus 127 ~~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~~ 163 (965)
T 2gag_A 127 VHTDVLVVGAGPAGLAAAREASRSGARVMLLDERAEA 163 (965)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred cCCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCC
Confidence 3579999999999999999999999999999998653
No 196
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=97.50 E-value=0.00058 Score=76.35 Aligned_cols=99 Identities=16% Similarity=0.227 Sum_probs=75.0
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCCCCCCCeeeeChhHHHHHHhhhchHHHHHhcCCCccccceeEEee
Q 005056 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCT 122 (716)
Q Consensus 43 ~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~~~~p~a~~i~~rtmeilr~l~Gl~~~l~~~~~~~~~~~~~~~~~ 122 (716)
.-.|+|||||+.|+-+|..|++.|.+|+|+|+.+.+.+. +.
T Consensus 182 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~-----~d---------------------------------- 222 (499)
T 1xdi_A 182 PDHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHVLPY-----ED---------------------------------- 222 (499)
T ss_dssp CSSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSSSSCC-----SS----------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccccc-----cC----------------------------------
Confidence 368999999999999999999999999999988653210 00
Q ss_pred cCCCCceeeccCCCccccccccCCccccccChHHHHHHHHHHHHhcCceeecccccccccccccccceEEeCcEEEEEEe
Q 005056 123 SVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSA 202 (716)
Q Consensus 123 ~~~g~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~l~~~~~~~~~v~~g~~v~~i~~ 202 (716)
..+...|.+.+++.|+ +++++++|++++.
T Consensus 223 --------------------------------~~~~~~l~~~l~~~GV-------------------~i~~~~~V~~i~~ 251 (499)
T 1xdi_A 223 --------------------------------ADAALVLEESFAERGV-------------------RLFKNARAASVTR 251 (499)
T ss_dssp --------------------------------HHHHHHHHHHHHHTTC-------------------EEETTCCEEEEEE
T ss_pred --------------------------------HHHHHHHHHHHHHCCC-------------------EEEeCCEEEEEEE
Confidence 0123345556677777 9999999999998
Q ss_pred cCCeEEEEEEeccCCceeeEEEEecEEEecCCCChh
Q 005056 203 TDQCINVIASFLKEGKCTERNIQCNILIGTDGAGST 238 (716)
Q Consensus 203 ~~~gv~v~v~~~~~g~~~~~~i~ad~VVgADG~~S~ 238 (716)
++++++++. .+|+ ++.+|.||.|-|.++.
T Consensus 252 ~~~~v~v~~---~~g~----~i~aD~Vv~a~G~~p~ 280 (499)
T 1xdi_A 252 TGAGVLVTM---TDGR----TVEGSHALMTIGSVPN 280 (499)
T ss_dssp CSSSEEEEE---TTSC----EEEESEEEECCCEEEC
T ss_pred eCCEEEEEE---CCCc----EEEcCEEEECCCCCcC
Confidence 777765543 2443 6899999999998754
No 197
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=97.49 E-value=0.00079 Score=75.12 Aligned_cols=101 Identities=18% Similarity=0.301 Sum_probs=74.3
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCCCCCCCeeeeChhHHHHHHhhhchHHHHHhcCCCccccceeEEee
Q 005056 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCT 122 (716)
Q Consensus 43 ~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~~~~p~a~~i~~rtmeilr~l~Gl~~~l~~~~~~~~~~~~~~~~~ 122 (716)
.-+|+|||||++|+-+|..|++.|.+|+|+|+.+.+... +.
T Consensus 174 ~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~-----~d---------------------------------- 214 (492)
T 3ic9_A 174 PKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSVANL-----QD---------------------------------- 214 (492)
T ss_dssp CSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCCTTC-----CC----------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccccc-----CC----------------------------------
Confidence 468999999999999999999999999999998753210 00
Q ss_pred cCCCCceeeccCCCccccccccCCccccccChHHHHHHHHHHHHhcCceeecccccccccccccccceEEeCcEEEEEEe
Q 005056 123 SVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSA 202 (716)
Q Consensus 123 ~~~g~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~l~~~~~~~~~v~~g~~v~~i~~ 202 (716)
..+...+.+.+++. + ++++++++++++.
T Consensus 215 --------------------------------~~~~~~l~~~l~~~-V-------------------~i~~~~~v~~i~~ 242 (492)
T 3ic9_A 215 --------------------------------EEMKRYAEKTFNEE-F-------------------YFDAKARVISTIE 242 (492)
T ss_dssp --------------------------------HHHHHHHHHHHHTT-S-------------------EEETTCEEEEEEE
T ss_pred --------------------------------HHHHHHHHHHHhhC-c-------------------EEEECCEEEEEEE
Confidence 01222334444444 5 8999999999998
Q ss_pred cCCeEEEEEEeccCCceeeEEEEecEEEecCCCCh
Q 005056 203 TDQCINVIASFLKEGKCTERNIQCNILIGTDGAGS 237 (716)
Q Consensus 203 ~~~gv~v~v~~~~~g~~~~~~i~ad~VVgADG~~S 237 (716)
+++++++++.. .+|+ ..++.+|.||.|-|...
T Consensus 243 ~~~~v~v~~~~-~~G~--~~~i~~D~Vi~a~G~~p 274 (492)
T 3ic9_A 243 KEDAVEVIYFD-KSGQ--KTTESFQYVLAATGRKA 274 (492)
T ss_dssp CSSSEEEEEEC-TTCC--EEEEEESEEEECSCCEE
T ss_pred cCCEEEEEEEe-CCCc--eEEEECCEEEEeeCCcc
Confidence 88888776642 2342 35799999999999753
No 198
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=97.48 E-value=0.00031 Score=76.05 Aligned_cols=33 Identities=24% Similarity=0.449 Sum_probs=29.8
Q ss_pred CEEEECCCHHHHHHHHHHHhCC--CCEEEECCCCC
Q 005056 45 PVLIVGAGPVGLVLSILLTKLG--IKCSVLEKNKA 77 (716)
Q Consensus 45 dVlIVGaGpaGLt~Al~Lar~G--i~v~liEr~~~ 77 (716)
+|+||||||+|+++|..|+++| ++|+|||+++.
T Consensus 4 kVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~ 38 (401)
T 3vrd_B 4 KVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNET 38 (401)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSS
T ss_pred EEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCC
Confidence 6999999999999999999876 68999998864
No 199
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=97.47 E-value=6.3e-05 Score=80.75 Aligned_cols=35 Identities=37% Similarity=0.450 Sum_probs=32.8
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCC
Q 005056 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~ 78 (716)
+||+|||||++||++|..|+++|++|+|+|+++.+
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~ 36 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHI 36 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSS
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCC
Confidence 68999999999999999999999999999998754
No 200
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=97.46 E-value=0.00066 Score=73.87 Aligned_cols=99 Identities=18% Similarity=0.278 Sum_probs=74.6
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCCCCCCCeeeeChhHHHHHHhhhchHHHHHhcCCCccccceeEEee
Q 005056 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCT 122 (716)
Q Consensus 43 ~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~~~~p~a~~i~~rtmeilr~l~Gl~~~l~~~~~~~~~~~~~~~~~ 122 (716)
.-+|+|||||+.|+-+|..|++.|.+|+++|+.+.+.... +
T Consensus 152 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l~~~---------------~------------------------ 192 (415)
T 3lxd_A 152 AKNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVLARV---------------A------------------------ 192 (415)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTT---------------S------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCchhhhh---------------c------------------------
Confidence 3579999999999999999999999999999887542100 0
Q ss_pred cCCCCceeeccCCCccccccccCCccccccChHHHHHHHHHHHHhcCceeecccccccccccccccceEEeCcEEEEEEe
Q 005056 123 SVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSA 202 (716)
Q Consensus 123 ~~~g~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~l~~~~~~~~~v~~g~~v~~i~~ 202 (716)
...+...+.+.+++.|+ ++++++++++++.
T Consensus 193 -------------------------------~~~~~~~l~~~l~~~GV-------------------~i~~~~~v~~i~~ 222 (415)
T 3lxd_A 193 -------------------------------GEALSEFYQAEHRAHGV-------------------DLRTGAAMDCIEG 222 (415)
T ss_dssp -------------------------------CHHHHHHHHHHHHHTTC-------------------EEEETCCEEEEEE
T ss_pred -------------------------------CHHHHHHHHHHHHhCCC-------------------EEEECCEEEEEEe
Confidence 01234445666677787 9999999999998
Q ss_pred cCCeEE-EEEEeccCCceeeEEEEecEEEecCCCCh
Q 005056 203 TDQCIN-VIASFLKEGKCTERNIQCNILIGTDGAGS 237 (716)
Q Consensus 203 ~~~gv~-v~v~~~~~g~~~~~~i~ad~VVgADG~~S 237 (716)
+++.++ +++. +|+ ++.||+||.|-|...
T Consensus 223 ~~~~v~~v~l~---dG~----~i~aD~Vv~a~G~~p 251 (415)
T 3lxd_A 223 DGTKVTGVRMQ---DGS----VIPADIVIVGIGIVP 251 (415)
T ss_dssp SSSBEEEEEES---SSC----EEECSEEEECSCCEE
T ss_pred cCCcEEEEEeC---CCC----EEEcCEEEECCCCcc
Confidence 776653 3332 453 689999999999754
No 201
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=97.45 E-value=7.4e-05 Score=82.83 Aligned_cols=35 Identities=17% Similarity=0.398 Sum_probs=32.7
Q ss_pred ccCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCC
Q 005056 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (716)
Q Consensus 42 ~~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~ 76 (716)
.++||+||||||+|+++|..|++.|.+|+|||+..
T Consensus 3 ~~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~ 37 (463)
T 2r9z_A 3 QHFDLIAIGGGSGGLAVAEKAAAFGKRVALIESKA 37 (463)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred ccCcEEEECCCHHHHHHHHHHHhCCCcEEEEcCCC
Confidence 45899999999999999999999999999999973
No 202
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=97.44 E-value=0.0007 Score=74.14 Aligned_cols=99 Identities=13% Similarity=0.252 Sum_probs=72.1
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCCCCCCCeeeeChhHHHHHHhhhchHHHHHhcCCCccccceeEEee
Q 005056 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCT 122 (716)
Q Consensus 43 ~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~~~~p~a~~i~~rtmeilr~l~Gl~~~l~~~~~~~~~~~~~~~~~ 122 (716)
.-+|+|||||++|+-+|..|++.|.+|+|+|+.+.+.... +
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~~---------------~------------------------ 189 (431)
T 1q1r_A 149 DNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARVLERV---------------T------------------------ 189 (431)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTT---------------S------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccccch---------------h------------------------
Confidence 3579999999999999999999999999999876431100 0
Q ss_pred cCCCCceeeccCCCccccccccCCccccccChHHHHHHHHHHHHhcCceeecccccccccccccccceEEeCcEEEEEEe
Q 005056 123 SVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSA 202 (716)
Q Consensus 123 ~~~g~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~l~~~~~~~~~v~~g~~v~~i~~ 202 (716)
...+...|.+.+++.|+ ++++++++++++.
T Consensus 190 -------------------------------~~~~~~~l~~~l~~~GV-------------------~i~~~~~v~~i~~ 219 (431)
T 1q1r_A 190 -------------------------------APPVSAFYEHLHREAGV-------------------DIRTGTQVCGFEM 219 (431)
T ss_dssp -------------------------------CHHHHHHHHHHHHHHTC-------------------EEECSCCEEEEEE
T ss_pred -------------------------------hHHHHHHHHHHHHhCCe-------------------EEEeCCEEEEEEe
Confidence 01223345566667777 8999999999987
Q ss_pred --cCCeE-EEEEEeccCCceeeEEEEecEEEecCCCCh
Q 005056 203 --TDQCI-NVIASFLKEGKCTERNIQCNILIGTDGAGS 237 (716)
Q Consensus 203 --~~~gv-~v~v~~~~~g~~~~~~i~ad~VVgADG~~S 237 (716)
+++.+ .+++ .+|+ ++.+|.||.|.|...
T Consensus 220 ~~~~~~v~~v~~---~~G~----~i~~D~Vv~a~G~~p 250 (431)
T 1q1r_A 220 STDQQKVTAVLC---EDGT----RLPADLVIAGIGLIP 250 (431)
T ss_dssp CTTTCCEEEEEE---TTSC----EEECSEEEECCCEEE
T ss_pred ccCCCcEEEEEe---CCCC----EEEcCEEEECCCCCc
Confidence 44554 3333 2453 689999999999754
No 203
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.44 E-value=0.00064 Score=76.03 Aligned_cols=100 Identities=17% Similarity=0.275 Sum_probs=73.3
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCCCCCCCeeeeChhHHHHHHhhhchHHHHHhcCCCccccceeEEee
Q 005056 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCT 122 (716)
Q Consensus 43 ~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~~~~p~a~~i~~rtmeilr~l~Gl~~~l~~~~~~~~~~~~~~~~~ 122 (716)
.-.|+|||||++|+-+|..|++.|.+|+|+|+.+.+.+. + .
T Consensus 176 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~----------------~---d-------------------- 216 (500)
T 1onf_A 176 SKKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRILRK----------------F---D-------------------- 216 (500)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSSCTT----------------S---C--------------------
T ss_pred CCeEEEECChHHHHHHHHHHHHcCCeEEEEecCCccCcc----------------c---c--------------------
Confidence 358999999999999999999999999999987653210 0 0
Q ss_pred cCCCCceeeccCCCccccccccCCccccccChHHHHHHHHHHHHhcCceeecccccccccccccccceEEeCcEEEEEEe
Q 005056 123 SVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSA 202 (716)
Q Consensus 123 ~~~g~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~l~~~~~~~~~v~~g~~v~~i~~ 202 (716)
..+...|.+.+++.|+ ++++++++++++.
T Consensus 217 --------------------------------~~~~~~l~~~l~~~gv-------------------~i~~~~~v~~i~~ 245 (500)
T 1onf_A 217 --------------------------------ESVINVLENDMKKNNI-------------------NIVTFADVVEIKK 245 (500)
T ss_dssp --------------------------------HHHHHHHHHHHHHTTC-------------------EEECSCCEEEEEE
T ss_pred --------------------------------hhhHHHHHHHHHhCCC-------------------EEEECCEEEEEEE
Confidence 0122335556667777 9999999999987
Q ss_pred cCCe-EEEEEEeccCCceeeEEEEecEEEecCCCChh
Q 005056 203 TDQC-INVIASFLKEGKCTERNIQCNILIGTDGAGST 238 (716)
Q Consensus 203 ~~~g-v~v~v~~~~~g~~~~~~i~ad~VVgADG~~S~ 238 (716)
++++ +.+++. +|+ + ++.+|.||.|-|....
T Consensus 246 ~~~~~~~v~~~---~g~--~-~~~~D~vi~a~G~~p~ 276 (500)
T 1onf_A 246 VSDKNLSIHLS---DGR--I-YEHFDHVIYCVGRSPD 276 (500)
T ss_dssp SSTTCEEEEET---TSC--E-EEEESEEEECCCBCCT
T ss_pred cCCceEEEEEC---CCc--E-EEECCEEEECCCCCcC
Confidence 6544 555442 453 1 3899999999997653
No 204
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=97.43 E-value=9.5e-05 Score=81.67 Aligned_cols=38 Identities=34% Similarity=0.468 Sum_probs=35.3
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCC
Q 005056 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (716)
Q Consensus 41 ~~~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~ 78 (716)
+..+||+|||+|++|+++|..|++.|.+|+|+||++..
T Consensus 18 ~~~~dv~iiG~G~~g~~~a~~l~~~g~~v~~~e~~~~~ 55 (475)
T 3p1w_A 18 GEHYDVIILGTGLKECILSGLLSHYGKKILVLDRNPYY 55 (475)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred cccCCEEEECCCHHHHHHHHHHHHCCCcEEEEeccCCC
Confidence 45689999999999999999999999999999999755
No 205
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=97.42 E-value=7.5e-05 Score=82.46 Aligned_cols=35 Identities=20% Similarity=0.377 Sum_probs=32.8
Q ss_pred ccCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCC
Q 005056 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (716)
Q Consensus 42 ~~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~ 76 (716)
.++||+||||||+|+++|..|++.|.+|+||||..
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~ 37 (450)
T 1ges_A 3 KHYDYIAIGGGSGGIASINRAAMYGQKCALIEAKE 37 (450)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTTTCCEEEEESSC
T ss_pred ccCCEEEECCCHHHHHHHHHHHhCCCeEEEEcCCC
Confidence 45899999999999999999999999999999973
No 206
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=97.42 E-value=0.00071 Score=75.45 Aligned_cols=99 Identities=14% Similarity=0.192 Sum_probs=73.8
Q ss_pred cCCEEEECCCHHHHHHHHHHHhC---CCCEEEECCCCCCCCCCCeeeeChhHHHHHHhhhchHHHHHhcCCCccccceeE
Q 005056 43 VVPVLIVGAGPVGLVLSILLTKL---GIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFI 119 (716)
Q Consensus 43 ~~dVlIVGaGpaGLt~Al~Lar~---Gi~v~liEr~~~~~~~p~a~~i~~rtmeilr~l~Gl~~~l~~~~~~~~~~~~~~ 119 (716)
.-+|+|||||++|+-+|..|++. |.+|+|+|+.+.+.+. +
T Consensus 187 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~~----------------~--------------------- 229 (490)
T 1fec_A 187 PKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMILRG----------------F--------------------- 229 (490)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSSSTT----------------S---------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCcccc----------------c---------------------
Confidence 35899999999999999999999 9999999988643110 0
Q ss_pred EeecCCCCceeeccCCCccccccccCCccccccChHHHHHHHHHHHHhcCceeecccccccccccccccceEEeCcEEEE
Q 005056 120 YCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVS 199 (716)
Q Consensus 120 ~~~~~~g~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~l~~~~~~~~~v~~g~~v~~ 199 (716)
...+...|.+.+++.|+ +++++++|++
T Consensus 230 ----------------------------------d~~~~~~l~~~l~~~GV-------------------~i~~~~~v~~ 256 (490)
T 1fec_A 230 ----------------------------------DSELRKQLTEQLRANGI-------------------NVRTHENPAK 256 (490)
T ss_dssp ----------------------------------CHHHHHHHHHHHHHTTE-------------------EEEETCCEEE
T ss_pred ----------------------------------CHHHHHHHHHHHHhCCC-------------------EEEeCCEEEE
Confidence 01123345556667776 9999999999
Q ss_pred EEecCCe-EEEEEEeccCCceeeEEEEecEEEecCCCChh
Q 005056 200 VSATDQC-INVIASFLKEGKCTERNIQCNILIGTDGAGST 238 (716)
Q Consensus 200 i~~~~~g-v~v~v~~~~~g~~~~~~i~ad~VVgADG~~S~ 238 (716)
++.++++ +.+++. +|+ ++.+|.||.|-|.+..
T Consensus 257 i~~~~~~~~~v~~~---~G~----~i~~D~vv~a~G~~p~ 289 (490)
T 1fec_A 257 VTKNADGTRHVVFE---SGA----EADYDVVMLAIGRVPR 289 (490)
T ss_dssp EEECTTSCEEEEET---TSC----EEEESEEEECSCEEES
T ss_pred EEEcCCCEEEEEEC---CCc----EEEcCEEEEccCCCcC
Confidence 9887653 555442 453 6899999999997643
No 207
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=97.41 E-value=0.0001 Score=81.38 Aligned_cols=37 Identities=27% Similarity=0.437 Sum_probs=33.9
Q ss_pred ccCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCC
Q 005056 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (716)
Q Consensus 42 ~~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~ 78 (716)
...+|+||||||+||++|..|++.|++|+|||+.+.+
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~~ 157 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRM 157 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCC
Confidence 4579999999999999999999999999999998653
No 208
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.41 E-value=0.0005 Score=75.94 Aligned_cols=36 Identities=36% Similarity=0.576 Sum_probs=32.8
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCC
Q 005056 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (716)
Q Consensus 43 ~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~ 78 (716)
.-+|+|||||++|+-+|..|++.|.+|+|+|+.+.+
T Consensus 171 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~ 206 (458)
T 1lvl_A 171 PQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERI 206 (458)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCcc
Confidence 357999999999999999999999999999998653
No 209
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=97.40 E-value=0.00073 Score=73.48 Aligned_cols=99 Identities=26% Similarity=0.394 Sum_probs=73.0
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCCCCCCCeeeeChhHHHHHHhhhchHHHHHhcCCCccccceeEEee
Q 005056 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCT 122 (716)
Q Consensus 43 ~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~~~~p~a~~i~~rtmeilr~l~Gl~~~l~~~~~~~~~~~~~~~~~ 122 (716)
..+|+|||||++|+-+|..|++.|.+|+++|+.+.+. + +.+
T Consensus 143 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l---------~------~~~------------------------ 183 (410)
T 3ef6_A 143 ATRLLIVGGGLIGCEVATTARKLGLSVTILEAGDELL---------V------RVL------------------------ 183 (410)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS---------H------HHH------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccc---------h------hhc------------------------
Confidence 3579999999999999999999999999999886532 0 000
Q ss_pred cCCCCceeeccCCCccccccccCCccccccChHHHHHHHHHHHHhcCceeecccccccccccccccceEEeCcEEEEEEe
Q 005056 123 SVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSA 202 (716)
Q Consensus 123 ~~~g~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~l~~~~~~~~~v~~g~~v~~i~~ 202 (716)
...+...+.+.+++.|+ ++++++++++++.
T Consensus 184 -------------------------------~~~~~~~l~~~l~~~GV-------------------~i~~~~~v~~i~~ 213 (410)
T 3ef6_A 184 -------------------------------GRRIGAWLRGLLTELGV-------------------QVELGTGVVGFSG 213 (410)
T ss_dssp -------------------------------CHHHHHHHHHHHHHHTC-------------------EEECSCCEEEEEC
T ss_pred -------------------------------CHHHHHHHHHHHHHCCC-------------------EEEeCCEEEEEec
Confidence 01223345556667777 9999999999987
Q ss_pred cCCeEEEEEEeccCCceeeEEEEecEEEecCCCCh
Q 005056 203 TDQCINVIASFLKEGKCTERNIQCNILIGTDGAGS 237 (716)
Q Consensus 203 ~~~gv~v~v~~~~~g~~~~~~i~ad~VVgADG~~S 237 (716)
++....+++. +|+ ++.||+||.|-|...
T Consensus 214 ~~~~~~v~~~---dg~----~i~aD~Vv~a~G~~p 241 (410)
T 3ef6_A 214 EGQLEQVMAS---DGR----SFVADSALICVGAEP 241 (410)
T ss_dssp SSSCCEEEET---TSC----EEECSEEEECSCEEE
T ss_pred cCcEEEEEEC---CCC----EEEcCEEEEeeCCee
Confidence 6543344443 453 689999999999764
No 210
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.40 E-value=9.7e-05 Score=82.74 Aligned_cols=34 Identities=21% Similarity=0.453 Sum_probs=32.3
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCC
Q 005056 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (716)
Q Consensus 43 ~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~ 76 (716)
++||+||||||+|+++|..|+++|.+|+||||..
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~ 35 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARHNAKVALVEKSR 35 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred ccCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 4899999999999999999999999999999984
No 211
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=97.40 E-value=0.00014 Score=77.42 Aligned_cols=34 Identities=29% Similarity=0.398 Sum_probs=32.3
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCC
Q 005056 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~ 77 (716)
.||+|||||++|+.+|+.|+++|++|+|||+++.
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~~ 35 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRPK 35 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTT
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccCC
Confidence 5899999999999999999999999999999874
No 212
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=97.38 E-value=0.001 Score=69.63 Aligned_cols=36 Identities=25% Similarity=0.388 Sum_probs=32.5
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCC
Q 005056 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (716)
Q Consensus 43 ~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~ 78 (716)
.-.|+|||+|++|+-+|..|++.|.+|+++++.+..
T Consensus 173 ~~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~~ 208 (338)
T 3itj_A 173 NKPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHL 208 (338)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCcc
Confidence 357999999999999999999999999999987653
No 213
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=97.37 E-value=0.0011 Score=73.52 Aligned_cols=99 Identities=21% Similarity=0.395 Sum_probs=75.6
Q ss_pred cCCEEEECCCHHHHHHHHHHHhC-CCCEEEECCCCCCCCCCCeeeeChhHHHHHHhhhchHHHHHhcCCCccccceeEEe
Q 005056 43 VVPVLIVGAGPVGLVLSILLTKL-GIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYC 121 (716)
Q Consensus 43 ~~dVlIVGaGpaGLt~Al~Lar~-Gi~v~liEr~~~~~~~p~a~~i~~rtmeilr~l~Gl~~~l~~~~~~~~~~~~~~~~ 121 (716)
.-+|+|||||++|+-+|..|++. |.+|+++|+.+...... +
T Consensus 159 ~~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~l~~~---------------~----------------------- 200 (472)
T 3iwa_A 159 VSKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQIMPGF---------------T----------------------- 200 (472)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSSSTTT---------------S-----------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCcccccc---------------c-----------------------
Confidence 35799999999999999999999 99999999875431100 0
Q ss_pred ecCCCCceeeccCCCccccccccCCccccccChHHHHHHHHHHHHhcCceeecccccccccccccccceEEeCcEEEEEE
Q 005056 122 TSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVS 201 (716)
Q Consensus 122 ~~~~g~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~l~~~~~~~~~v~~g~~v~~i~ 201 (716)
...+...|.+.+++.|+ ++++++++++++
T Consensus 201 --------------------------------~~~~~~~l~~~l~~~GV-------------------~i~~~~~v~~i~ 229 (472)
T 3iwa_A 201 --------------------------------SKSLSQMLRHDLEKNDV-------------------VVHTGEKVVRLE 229 (472)
T ss_dssp --------------------------------CHHHHHHHHHHHHHTTC-------------------EEECSCCEEEEE
T ss_pred --------------------------------CHHHHHHHHHHHHhcCC-------------------EEEeCCEEEEEE
Confidence 01234456666777777 999999999999
Q ss_pred ecCCeEEEEEEeccCCceeeEEEEecEEEecCCCCh
Q 005056 202 ATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGS 237 (716)
Q Consensus 202 ~~~~gv~v~v~~~~~g~~~~~~i~ad~VVgADG~~S 237 (716)
.+++.+++++. +|+ ++.+|.||.|-|...
T Consensus 230 ~~~~~v~v~~~---~g~----~i~aD~Vv~a~G~~p 258 (472)
T 3iwa_A 230 GENGKVARVIT---DKR----TLDADLVILAAGVSP 258 (472)
T ss_dssp ESSSBEEEEEE---SSC----EEECSEEEECSCEEE
T ss_pred ccCCeEEEEEe---CCC----EEEcCEEEECCCCCc
Confidence 87777776654 453 689999999999753
No 214
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=97.33 E-value=0.0011 Score=73.06 Aligned_cols=98 Identities=18% Similarity=0.325 Sum_probs=71.9
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCCCCCCCeeeeChhHHHHHHhhhchHHHHHhcCCCccccceeEEeec
Q 005056 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCTS 123 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~~~~p~a~~i~~rtmeilr~l~Gl~~~l~~~~~~~~~~~~~~~~~~ 123 (716)
-+|+|||||++|+-+|..|++.|.+|+|+|+.+.+... .+
T Consensus 150 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~---------------~~------------------------- 189 (452)
T 2cdu_A 150 KTITIIGSGYIGAELAEAYSNQNYNVNLIDGHERVLYK---------------YF------------------------- 189 (452)
T ss_dssp SEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSTTTT---------------TS-------------------------
T ss_pred CeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCchhhh---------------hh-------------------------
Confidence 57999999999999999999999999999987643210 00
Q ss_pred CCCCceeeccCCCccccccccCCccccccChHHHHHHHHHHHHhcCceeecccccccccccccccceEEeCcEEEEEEec
Q 005056 124 VTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSAT 203 (716)
Q Consensus 124 ~~g~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~l~~~~~~~~~v~~g~~v~~i~~~ 203 (716)
-..+...|.+.+++.|+ ++++++++++++.+
T Consensus 190 ------------------------------~~~~~~~l~~~l~~~Gv-------------------~i~~~~~v~~i~~~ 220 (452)
T 2cdu_A 190 ------------------------------DKEFTDILAKDYEAHGV-------------------NLVLGSKVAAFEEV 220 (452)
T ss_dssp ------------------------------CHHHHHHHHHHHHHTTC-------------------EEEESSCEEEEEEE
T ss_pred ------------------------------hhhHHHHHHHHHHHCCC-------------------EEEcCCeeEEEEcC
Confidence 01133445566677777 99999999999875
Q ss_pred CCeEEEEEEeccCCceeeEEEEecEEEecCCCCh
Q 005056 204 DQCINVIASFLKEGKCTERNIQCNILIGTDGAGS 237 (716)
Q Consensus 204 ~~gv~v~v~~~~~g~~~~~~i~ad~VVgADG~~S 237 (716)
++.++.. . . +|+ ++.+|.||.|-|...
T Consensus 221 ~~~v~~v-~-~-~g~----~i~~D~vv~a~G~~p 247 (452)
T 2cdu_A 221 DDEIITK-T-L-DGK----EIKSDIAILCIGFRP 247 (452)
T ss_dssp TTEEEEE-E-T-TSC----EEEESEEEECCCEEE
T ss_pred CCeEEEE-E-e-CCC----EEECCEEEECcCCCC
Confidence 6665422 2 2 343 689999999999653
No 215
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=97.31 E-value=0.0011 Score=74.09 Aligned_cols=98 Identities=19% Similarity=0.240 Sum_probs=72.4
Q ss_pred cCCEEEECCCHHHHHHHHHHHhC---CCCEEEECCCCCCCCCCCeeeeChhHHHHHHhhhchHHHHHhcCCCccccceeE
Q 005056 43 VVPVLIVGAGPVGLVLSILLTKL---GIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFI 119 (716)
Q Consensus 43 ~~dVlIVGaGpaGLt~Al~Lar~---Gi~v~liEr~~~~~~~p~a~~i~~rtmeilr~l~Gl~~~l~~~~~~~~~~~~~~ 119 (716)
.-.|+|||||++|+-+|..|++. |.+|+|+|+.+.+... + .
T Consensus 191 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~~----------------~---d----------------- 234 (495)
T 2wpf_A 191 PRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLILRG----------------F---D----------------- 234 (495)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSSCTT----------------S---C-----------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCccccc----------------c---C-----------------
Confidence 35899999999999999999999 9999999987643210 0 0
Q ss_pred EeecCCCCceeeccCCCccccccccCCccccccChHHHHHHHHHHHHhcCceeecccccccccccccccceEEeCcEEEE
Q 005056 120 YCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVS 199 (716)
Q Consensus 120 ~~~~~~g~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~l~~~~~~~~~v~~g~~v~~ 199 (716)
..+...|.+.+++.|+ +++++++|++
T Consensus 235 -----------------------------------~~~~~~l~~~l~~~GV-------------------~i~~~~~v~~ 260 (495)
T 2wpf_A 235 -----------------------------------ETIREEVTKQLTANGI-------------------EIMTNENPAK 260 (495)
T ss_dssp -----------------------------------HHHHHHHHHHHHHTTC-------------------EEEESCCEEE
T ss_pred -----------------------------------HHHHHHHHHHHHhCCC-------------------EEEeCCEEEE
Confidence 0122345555667777 9999999999
Q ss_pred EEecCCe-EEEEEEeccCCceeeEEEEecEEEecCCCCh
Q 005056 200 VSATDQC-INVIASFLKEGKCTERNIQCNILIGTDGAGS 237 (716)
Q Consensus 200 i~~~~~g-v~v~v~~~~~g~~~~~~i~ad~VVgADG~~S 237 (716)
++.++++ +.+++. +|+ ++.+|.||.|-|...
T Consensus 261 i~~~~~~~~~v~~~---~G~----~i~~D~vv~a~G~~p 292 (495)
T 2wpf_A 261 VSLNTDGSKHVTFE---SGK----TLDVDVVMMAIGRIP 292 (495)
T ss_dssp EEECTTSCEEEEET---TSC----EEEESEEEECSCEEE
T ss_pred EEEcCCceEEEEEC---CCc----EEEcCEEEECCCCcc
Confidence 9877543 555443 453 689999999999653
No 216
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=97.31 E-value=0.0014 Score=73.69 Aligned_cols=96 Identities=20% Similarity=0.142 Sum_probs=72.7
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCCCCCCCeeeeChhHHHHHHhhhchHHHHHhcCCCccccceeEEee
Q 005056 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCT 122 (716)
Q Consensus 43 ~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~~~~p~a~~i~~rtmeilr~l~Gl~~~l~~~~~~~~~~~~~~~~~ 122 (716)
.-.++|||||+.|+=+|..|++.|.+|+|+++.... ++..
T Consensus 223 P~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~~~L--------------------~~~D-------------------- 262 (542)
T 4b1b_A 223 PGKTLVVGASYVALECSGFLNSLGYDVTVAVRSIVL--------------------RGFD-------------------- 262 (542)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHHTCCEEEEESSCSS--------------------TTSC--------------------
T ss_pred CceEEEECCCHHHHHHHHHHHhcCCeEEEecccccc--------------------cccc--------------------
Confidence 357999999999999999999999999999874321 0110
Q ss_pred cCCCCceeeccCCCccccccccCCccccccChHHHHHHHHHHHHhcCceeecccccccccccccccceEEeCcEEEEEEe
Q 005056 123 SVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSA 202 (716)
Q Consensus 123 ~~~g~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~l~~~~~~~~~v~~g~~v~~i~~ 202 (716)
.++...|.+.+++.|+ .++.++.+..++.
T Consensus 263 --------------------------------~ei~~~l~~~l~~~gi-------------------~~~~~~~v~~~~~ 291 (542)
T 4b1b_A 263 --------------------------------QQCAVKVKLYMEEQGV-------------------MFKNGILPKKLTK 291 (542)
T ss_dssp --------------------------------HHHHHHHHHHHHHTTC-------------------EEEETCCEEEEEE
T ss_pred --------------------------------hhHHHHHHHHHHhhcc-------------------eeecceEEEEEEe
Confidence 1123345566677776 8999999999999
Q ss_pred cCCeEEEEEEeccCCceeeEEEEecEEEecCCCC
Q 005056 203 TDQCINVIASFLKEGKCTERNIQCNILIGTDGAG 236 (716)
Q Consensus 203 ~~~gv~v~v~~~~~g~~~~~~i~ad~VVgADG~~ 236 (716)
.++.+++.+. +++ ++.+|.|+.|-|.+
T Consensus 292 ~~~~~~v~~~---~~~----~~~~D~vLvAvGR~ 318 (542)
T 4b1b_A 292 MDDKILVEFS---DKT----SELYDTVLYAIGRK 318 (542)
T ss_dssp ETTEEEEEET---TSC----EEEESEEEECSCEE
T ss_pred cCCeEEEEEc---CCC----eEEEEEEEEccccc
Confidence 9998877654 342 56799999999854
No 217
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=97.30 E-value=0.0022 Score=66.40 Aligned_cols=35 Identities=17% Similarity=0.314 Sum_probs=32.1
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCC
Q 005056 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (716)
Q Consensus 43 ~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~ 77 (716)
.-+|+|||+|++|+-+|..|++.|.+|+++++.+.
T Consensus 143 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~ 177 (311)
T 2q0l_A 143 NKEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDG 177 (311)
T ss_dssp TSEEEEECCSHHHHHHHHHHHTTSSEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCCc
Confidence 36899999999999999999999999999998764
No 218
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=97.28 E-value=0.0013 Score=74.52 Aligned_cols=34 Identities=35% Similarity=0.501 Sum_probs=31.7
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCC
Q 005056 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~ 77 (716)
-+|+|||||++|+-+|..|++.|.+|+++|+.+.
T Consensus 152 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 185 (565)
T 3ntd_A 152 EHATVVGGGFIGLEMMESLHHLGIKTTLLELADQ 185 (565)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCc
Confidence 4799999999999999999999999999999764
No 219
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=97.28 E-value=0.00017 Score=84.15 Aligned_cols=38 Identities=34% Similarity=0.484 Sum_probs=34.6
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCC
Q 005056 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (716)
Q Consensus 41 ~~~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~ 78 (716)
..+.||+||||||+||++|..|+++|++|+||||.+..
T Consensus 389 ~~~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~~~ 426 (690)
T 3k30_A 389 ESDARVLVVGAGPSGLEAARALGVRGYDVVLAEAGRDL 426 (690)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred cccceEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCC
Confidence 45689999999999999999999999999999998743
No 220
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.27 E-value=0.00018 Score=79.65 Aligned_cols=34 Identities=35% Similarity=0.578 Sum_probs=32.1
Q ss_pred ccCCEEEECCCHHHHHHHHHHHhCCCCEEEECCC
Q 005056 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKN 75 (716)
Q Consensus 42 ~~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~ 75 (716)
.++||+||||||+|+++|..|++.|.+|+|||+.
T Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~ 37 (458)
T 1lvl_A 4 IQTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEGQ 37 (458)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHTCCEEEECSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEccC
Confidence 4589999999999999999999999999999993
No 221
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=97.27 E-value=0.0017 Score=67.09 Aligned_cols=34 Identities=24% Similarity=0.311 Sum_probs=31.7
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCC
Q 005056 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~ 77 (716)
-+|+|||+|++|+-+|..|++.|.+|+++++.+.
T Consensus 145 ~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~ 178 (310)
T 1fl2_A 145 KRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPE 178 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTBSEEEEECSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCcc
Confidence 5799999999999999999999999999998764
No 222
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.27 E-value=0.0028 Score=70.50 Aligned_cols=101 Identities=20% Similarity=0.243 Sum_probs=72.8
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCCCCCCCeeeeChhHHHHHHhhhchHHHHHhcCCCccccceeEEee
Q 005056 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCT 122 (716)
Q Consensus 43 ~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~~~~p~a~~i~~rtmeilr~l~Gl~~~l~~~~~~~~~~~~~~~~~ 122 (716)
.-.|+|||||++|+-+|..|++.|.+|+|+++..... .+.
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~l~--------------------~~d-------------------- 224 (488)
T 3dgz_A 185 PGKTLVVGASYVALECAGFLTGIGLDTTVMMRSIPLR--------------------GFD-------------------- 224 (488)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCSST--------------------TSC--------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEEcCcccc--------------------cCC--------------------
Confidence 3479999999999999999999999999999753110 000
Q ss_pred cCCCCceeeccCCCccccccccCCccccccChHHHHHHHHHHHHhcCceeecccccccccccccccceEEeCcEEEEEEe
Q 005056 123 SVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSA 202 (716)
Q Consensus 123 ~~~g~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~l~~~~~~~~~v~~g~~v~~i~~ 202 (716)
..+.+.+.+.+++.|+ ++++++++.+++.
T Consensus 225 --------------------------------~~~~~~l~~~l~~~gv-------------------~~~~~~~v~~i~~ 253 (488)
T 3dgz_A 225 --------------------------------QQMSSLVTEHMESHGT-------------------QFLKGCVPSHIKK 253 (488)
T ss_dssp --------------------------------HHHHHHHHHHHHHTTC-------------------EEEETEEEEEEEE
T ss_pred --------------------------------HHHHHHHHHHHHHCCC-------------------EEEeCCEEEEEEE
Confidence 0123345555666776 9999999999987
Q ss_pred c-CCeEEEEEEeccCCceeeEEEEecEEEecCCCC
Q 005056 203 T-DQCINVIASFLKEGKCTERNIQCNILIGTDGAG 236 (716)
Q Consensus 203 ~-~~gv~v~v~~~~~g~~~~~~i~ad~VVgADG~~ 236 (716)
. ++.+.+++...++|+ ..++.+|.||.|-|..
T Consensus 254 ~~~~~~~v~~~~~~~g~--~~~~~~D~vi~a~G~~ 286 (488)
T 3dgz_A 254 LPTNQLQVTWEDHASGK--EDTGTFDTVLWAIGRV 286 (488)
T ss_dssp CTTSCEEEEEEETTTTE--EEEEEESEEEECSCEE
T ss_pred cCCCcEEEEEEeCCCCe--eEEEECCEEEEcccCC
Confidence 4 445666666433343 3568999999999954
No 223
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=97.27 E-value=0.0012 Score=73.21 Aligned_cols=35 Identities=34% Similarity=0.616 Sum_probs=32.3
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCC
Q 005056 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (716)
Q Consensus 43 ~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~ 77 (716)
..+|+|||||++|+-+|..|++.|.+|+|+|+.+.
T Consensus 186 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 220 (480)
T 3cgb_A 186 VEDVTIIGGGAIGLEMAETFVELGKKVRMIERNDH 220 (480)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGGG
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCc
Confidence 46899999999999999999999999999998763
No 224
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=97.25 E-value=0.0016 Score=71.64 Aligned_cols=96 Identities=21% Similarity=0.255 Sum_probs=72.5
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCCCCCCCeeeeChhHHHHHHhhhchHHHHHhcCCCccccceeEEeec
Q 005056 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCTS 123 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~~~~p~a~~i~~rtmeilr~l~Gl~~~l~~~~~~~~~~~~~~~~~~ 123 (716)
-+|+|||||++|+-+|..|++.|.+|+|+|+.+...... +
T Consensus 148 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~---------------~------------------------- 187 (452)
T 3oc4_A 148 QTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLENLLPKY---------------F------------------------- 187 (452)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTT---------------C-------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEEccCcccccc---------------C-------------------------
Confidence 579999999999999999999999999999876431100 0
Q ss_pred CCCCceeeccCCCccccccccCCccccccChHHHHHHHHHHHHhcCceeecccccccccccccccceEEeCcEEEEEEec
Q 005056 124 VTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSAT 203 (716)
Q Consensus 124 ~~g~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~l~~~~~~~~~v~~g~~v~~i~~~ 203 (716)
-..+...|.+.+++.|+ ++++++++++++.+
T Consensus 188 ------------------------------d~~~~~~l~~~l~~~GV-------------------~i~~~~~v~~i~~~ 218 (452)
T 3oc4_A 188 ------------------------------DKEMVAEVQKSLEKQAV-------------------IFHFEETVLGIEET 218 (452)
T ss_dssp ------------------------------CHHHHHHHHHHHHTTTE-------------------EEEETCCEEEEEEC
T ss_pred ------------------------------CHHHHHHHHHHHHHcCC-------------------EEEeCCEEEEEEcc
Confidence 01233445666677776 99999999999987
Q ss_pred CCeEEEEEEeccCCceeeEEEEecEEEecCCCC
Q 005056 204 DQCINVIASFLKEGKCTERNIQCNILIGTDGAG 236 (716)
Q Consensus 204 ~~gv~v~v~~~~~g~~~~~~i~ad~VVgADG~~ 236 (716)
++++.+++ +++ ++.+|.||.|-|..
T Consensus 219 ~~~v~v~~---~~g-----~i~aD~Vv~A~G~~ 243 (452)
T 3oc4_A 219 ANGIVLET---SEQ-----EISCDSGIFALNLH 243 (452)
T ss_dssp SSCEEEEE---SSC-----EEEESEEEECSCCB
T ss_pred CCeEEEEE---CCC-----EEEeCEEEECcCCC
Confidence 77774443 233 58999999999964
No 225
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=97.25 E-value=0.0014 Score=71.21 Aligned_cols=35 Identities=31% Similarity=0.508 Sum_probs=32.5
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCC
Q 005056 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (716)
Q Consensus 43 ~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~ 77 (716)
.-+|+|||||++|+-+|..|++.|.+|+|+|+.+.
T Consensus 145 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 179 (408)
T 2gqw_A 145 QSRLLIVGGGVIGLELAATARTAGVHVSLVETQPR 179 (408)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCc
Confidence 35899999999999999999999999999999874
No 226
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=97.24 E-value=0.0012 Score=70.20 Aligned_cols=35 Identities=26% Similarity=0.408 Sum_probs=32.1
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCC
Q 005056 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~ 78 (716)
-+|+|||+|++|+-+|..|++.|.+|+++++.+..
T Consensus 164 ~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~ 198 (360)
T 3ab1_A 164 KRVVIVGGGDSALDWTVGLIKNAASVTLVHRGHEF 198 (360)
T ss_dssp CEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSC
T ss_pred CcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCCC
Confidence 57999999999999999999999999999988643
No 227
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=97.21 E-value=0.0018 Score=72.29 Aligned_cols=98 Identities=16% Similarity=0.263 Sum_probs=71.3
Q ss_pred CCEEEECCCHHHHHHHHHHHh----CCCCEEEECCCCCCCCCCCeeeeChhHHHHHHhhhchHHHHHhcCCCccccceeE
Q 005056 44 VPVLIVGAGPVGLVLSILLTK----LGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFI 119 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar----~Gi~v~liEr~~~~~~~p~a~~i~~rtmeilr~l~Gl~~~l~~~~~~~~~~~~~~ 119 (716)
-.|+|||||++|+-+|..|++ .|++|+++++.+.+... .+
T Consensus 181 ~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~~~~~---------------~l--------------------- 224 (493)
T 1m6i_A 181 KSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGNMGK---------------IL--------------------- 224 (493)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSSTTTT---------------TS---------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCcccccc---------------cC---------------------
Confidence 579999999999999999987 48899999876532100 00
Q ss_pred EeecCCCCceeeccCCCccccccccCCccccccChHHHHHHHHHHHHhcCceeecccccccccccccccceEEeCcEEEE
Q 005056 120 YCTSVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVS 199 (716)
Q Consensus 120 ~~~~~~g~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~l~~~~~~~~~v~~g~~v~~ 199 (716)
+ ..+...+.+.+++.|+ +++++++|++
T Consensus 225 ---------------------------------~-~~~~~~~~~~l~~~GV-------------------~v~~~~~V~~ 251 (493)
T 1m6i_A 225 ---------------------------------P-EYLSNWTMEKVRREGV-------------------KVMPNAIVQS 251 (493)
T ss_dssp ---------------------------------C-HHHHHHHHHHHHTTTC-------------------EEECSCCEEE
T ss_pred ---------------------------------C-HHHHHHHHHHHHhcCC-------------------EEEeCCEEEE
Confidence 0 1233345566677777 9999999999
Q ss_pred EEecCCeEEEEEEeccCCceeeEEEEecEEEecCCCCh
Q 005056 200 VSATDQCINVIASFLKEGKCTERNIQCNILIGTDGAGS 237 (716)
Q Consensus 200 i~~~~~gv~v~v~~~~~g~~~~~~i~ad~VVgADG~~S 237 (716)
++.+++.+.+++. +|+ ++.||+||.|-|...
T Consensus 252 i~~~~~~~~v~l~---dG~----~i~aD~Vv~a~G~~p 282 (493)
T 1m6i_A 252 VGVSSGKLLIKLK---DGR----KVETDHIVAAVGLEP 282 (493)
T ss_dssp EEEETTEEEEEET---TSC----EEEESEEEECCCEEE
T ss_pred EEecCCeEEEEEC---CCC----EEECCEEEECCCCCc
Confidence 9877666655543 453 689999999999653
No 228
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=97.18 E-value=0.00037 Score=77.27 Aligned_cols=37 Identities=30% Similarity=0.429 Sum_probs=33.2
Q ss_pred ccCCEEEECCCHHHHHHHHHHHhCCC-CEEEECCCCCC
Q 005056 42 AVVPVLIVGAGPVGLVLSILLTKLGI-KCSVLEKNKAF 78 (716)
Q Consensus 42 ~~~dVlIVGaGpaGLt~Al~Lar~Gi-~v~liEr~~~~ 78 (716)
..+||+|||||++||++|+.|++.|+ +|+|+|+++.+
T Consensus 3 ~~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~~~ 40 (472)
T 1b37_A 3 VGPRVIVVGAGMSGISAAKRLSEAGITDLLILEATDHI 40 (472)
T ss_dssp --CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCCCC
Confidence 45799999999999999999999999 89999998765
No 229
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=97.15 E-value=0.0017 Score=72.28 Aligned_cols=36 Identities=22% Similarity=0.404 Sum_probs=32.7
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCC
Q 005056 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (716)
Q Consensus 43 ~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~ 78 (716)
.-+|+|||||++|+-+|..|++.|.+|+|+|+.+.+
T Consensus 194 ~~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~ 229 (490)
T 2bc0_A 194 IKRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTC 229 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSST
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCeEEEEEcccch
Confidence 357999999999999999999999999999998643
No 230
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=97.15 E-value=0.00028 Score=79.92 Aligned_cols=38 Identities=32% Similarity=0.461 Sum_probs=34.4
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCC
Q 005056 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (716)
Q Consensus 41 ~~~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~ 78 (716)
..++||+|||||++|+++|..|++.|++|+|||+....
T Consensus 5 ~~~~D~iIvG~G~aG~~~A~~L~~~g~~VlvlE~g~~~ 42 (546)
T 1kdg_A 5 ATPYDYIIVGAGPGGIIAADRLSEAGKKVLLLERGGPS 42 (546)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC
T ss_pred CCceeEEEECcCHHHHHHHHHHHhCCCeEEEEeCCCCC
Confidence 35689999999999999999999999999999998754
No 231
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=97.13 E-value=0.00023 Score=79.52 Aligned_cols=32 Identities=19% Similarity=0.303 Sum_probs=30.6
Q ss_pred cCCEEEECCCHHHHHHHHHHHh-CCCCEEEECC
Q 005056 43 VVPVLIVGAGPVGLVLSILLTK-LGIKCSVLEK 74 (716)
Q Consensus 43 ~~dVlIVGaGpaGLt~Al~Lar-~Gi~v~liEr 74 (716)
++||+||||||+|+++|+.|++ .|.+|+|||+
T Consensus 3 ~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~ 35 (490)
T 1fec_A 3 AYDLVVIGAGSGGLEAGWNAASLHKKRVAVIDL 35 (490)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHHHCCCEEEEES
T ss_pred cccEEEECCCHHHHHHHHHHHHHcCCEEEEEec
Confidence 5899999999999999999999 9999999994
No 232
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=97.13 E-value=0.0034 Score=65.67 Aligned_cols=35 Identities=20% Similarity=0.295 Sum_probs=32.1
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCC
Q 005056 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (716)
Q Consensus 43 ~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~ 77 (716)
.-+|+|||+|++|+-+|..|++.|.+|+++++.+.
T Consensus 152 ~~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~~ 186 (335)
T 2zbw_A 152 GKRVLIVGGGDSAVDWALNLLDTARRITLIHRRPQ 186 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCCc
Confidence 35799999999999999999999999999998764
No 233
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=97.11 E-value=0.0049 Score=69.14 Aligned_cols=32 Identities=28% Similarity=0.434 Sum_probs=30.0
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEECCC
Q 005056 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKN 75 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~ 75 (716)
-.|+|||||++|+-+|..|++.|.+|+|+++.
T Consensus 211 ~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~ 242 (519)
T 3qfa_A 211 GKTLVVGASYVALECAGFLAGIGLDVTVMVRS 242 (519)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CeEEEECCcHHHHHHHHHHHHcCCeEEEEecc
Confidence 46999999999999999999999999999974
No 234
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=97.10 E-value=0.00037 Score=81.71 Aligned_cols=37 Identities=30% Similarity=0.431 Sum_probs=34.1
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCC
Q 005056 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (716)
Q Consensus 41 ~~~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~ 77 (716)
....+|+||||||+||++|..|+++|++|+|||+.+.
T Consensus 387 ~~~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~ 423 (729)
T 1o94_A 387 KNKDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEK 423 (729)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred cCCceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 3457999999999999999999999999999999875
No 235
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.09 E-value=0.00023 Score=78.67 Aligned_cols=37 Identities=24% Similarity=0.286 Sum_probs=33.4
Q ss_pred ccCCEEEECCCHHHHHHHHHHHh-C------CCCEEEECCCCCC
Q 005056 42 AVVPVLIVGAGPVGLVLSILLTK-L------GIKCSVLEKNKAF 78 (716)
Q Consensus 42 ~~~dVlIVGaGpaGLt~Al~Lar-~------Gi~v~liEr~~~~ 78 (716)
..++|+||||||+|+++|..|++ + |++|+|||+.+.+
T Consensus 2 ~~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~ 45 (456)
T 1lqt_A 2 RPYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTP 45 (456)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSC
T ss_pred CCCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCC
Confidence 35799999999999999999999 7 9999999998653
No 236
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.09 E-value=0.00031 Score=80.44 Aligned_cols=35 Identities=26% Similarity=0.372 Sum_probs=32.5
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCCEEEECCC
Q 005056 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKN 75 (716)
Q Consensus 41 ~~~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~ 75 (716)
...+||+||||||+||++|..|+++|.+|+|||+.
T Consensus 105 ~~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~ 139 (598)
T 2x8g_A 105 KYDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYV 139 (598)
T ss_dssp SSSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred cccccEEEECCCccHHHHHHHHHhCCCeEEEEecc
Confidence 44589999999999999999999999999999984
No 237
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=97.08 E-value=0.0035 Score=65.14 Aligned_cols=34 Identities=18% Similarity=0.333 Sum_probs=31.3
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCC
Q 005056 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~ 77 (716)
-+|+|||||++|+-+|..|++.|.+|+++++.+.
T Consensus 156 ~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~~ 189 (319)
T 3cty_A 156 KRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMPK 189 (319)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTBSEEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCCc
Confidence 5799999999999999999999999999998753
No 238
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=96.98 E-value=0.00047 Score=80.04 Aligned_cols=38 Identities=24% Similarity=0.452 Sum_probs=34.5
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCC
Q 005056 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (716)
Q Consensus 41 ~~~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~ 78 (716)
....||+||||||+|+++|..|+++|++|+|||+.+..
T Consensus 371 ~~~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~ 408 (671)
T 1ps9_A 371 VQKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEI 408 (671)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSS
T ss_pred CCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCC
Confidence 34579999999999999999999999999999998754
No 239
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=96.97 E-value=0.004 Score=65.01 Aligned_cols=36 Identities=28% Similarity=0.523 Sum_probs=32.6
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCC
Q 005056 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (716)
Q Consensus 43 ~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~ 78 (716)
.-+|+|||+|++|+-+|..|++.|.+|+|+++.+.+
T Consensus 159 ~~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~ 194 (333)
T 1vdc_A 159 NKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDAF 194 (333)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTSSEEEEECSSSSC
T ss_pred CCeEEEECCChHHHHHHHHHHhcCCeEEEEecCCcC
Confidence 357999999999999999999999999999988643
No 240
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=96.96 E-value=0.00055 Score=79.31 Aligned_cols=38 Identities=26% Similarity=0.482 Sum_probs=34.7
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCC
Q 005056 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (716)
Q Consensus 41 ~~~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~ 78 (716)
....+|+||||||+||++|..|++.|++|+|+|+++.+
T Consensus 105 ~~~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~~~ 142 (662)
T 2z3y_A 105 KKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRV 142 (662)
T ss_dssp SCCCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred cCCCeEEEECcCHHHHHHHHHHHHCCCeEEEEecCCCC
Confidence 34579999999999999999999999999999998754
No 241
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=96.95 E-value=0.0006 Score=80.71 Aligned_cols=37 Identities=27% Similarity=0.484 Sum_probs=34.3
Q ss_pred ccCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCC
Q 005056 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (716)
Q Consensus 42 ~~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~ 78 (716)
...+|+||||||+||++|+.|+++|++|+|||++..+
T Consensus 277 ~~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~~~~ 313 (852)
T 2xag_A 277 KTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRV 313 (852)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEecCcC
Confidence 4579999999999999999999999999999998765
No 242
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=96.95 E-value=0.0021 Score=68.68 Aligned_cols=35 Identities=26% Similarity=0.484 Sum_probs=32.5
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCC
Q 005056 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~ 78 (716)
-+|+|||||++|+-+|..|++.|.+|+|+|+.+.+
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~ 178 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAMF 178 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHTTCEEEEECSSSCC
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCee
Confidence 58999999999999999999999999999998753
No 243
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=96.92 E-value=0.0064 Score=63.31 Aligned_cols=34 Identities=21% Similarity=0.457 Sum_probs=31.6
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCC
Q 005056 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~ 77 (716)
-+|+|||+|++|+-+|..|++.|.+|+++++.+.
T Consensus 153 ~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~ 186 (325)
T 2q7v_A 153 KKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRDT 186 (325)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCCc
Confidence 5799999999999999999999999999998764
No 244
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=96.92 E-value=0.0055 Score=63.36 Aligned_cols=36 Identities=19% Similarity=0.340 Sum_probs=32.5
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCC
Q 005056 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (716)
Q Consensus 43 ~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~ 78 (716)
..+|+|||+|++|+-+|..|++.|.+|+++++.+..
T Consensus 154 ~~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~~~ 189 (323)
T 3f8d_A 154 NRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTF 189 (323)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHSSEEEEECSSSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCCCC
Confidence 357999999999999999999999999999987643
No 245
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=96.91 E-value=0.00047 Score=76.96 Aligned_cols=38 Identities=16% Similarity=0.420 Sum_probs=33.9
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhC--CCCEEEECCCCCC
Q 005056 41 EAVVPVLIVGAGPVGLVLSILLTKL--GIKCSVLEKNKAF 78 (716)
Q Consensus 41 ~~~~dVlIVGaGpaGLt~Al~Lar~--Gi~v~liEr~~~~ 78 (716)
+.+++|+||||||+|+++|..|+++ |.+|+|||+.+..
T Consensus 9 ~~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~ 48 (493)
T 1m6i_A 9 PSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPEL 48 (493)
T ss_dssp CSEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSC
T ss_pred CCcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCC
Confidence 3468999999999999999999887 8999999998754
No 246
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=96.87 E-value=0.0025 Score=70.32 Aligned_cols=98 Identities=20% Similarity=0.296 Sum_probs=72.5
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCCCCCCCeeeeChhHHHHHHhhhchHHHHHhcCCCccccceeEEee
Q 005056 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCT 122 (716)
Q Consensus 43 ~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~~~~p~a~~i~~rtmeilr~l~Gl~~~l~~~~~~~~~~~~~~~~~ 122 (716)
...|+|||||+.|+-+|..|++.|.+|+++++.+..... +
T Consensus 170 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~~~l~~----------------~------------------------ 209 (463)
T 4dna_A 170 PESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKEILSR----------------F------------------------ 209 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT----------------S------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccccc----------------c------------------------
Confidence 458999999999999999999999999999988632100 0
Q ss_pred cCCCCceeeccCCCccccccccCCccccccChHHHHHHHHHHHHhcCceeecccccccccccccccceEEeCcEEEEEEe
Q 005056 123 SVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSA 202 (716)
Q Consensus 123 ~~~g~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~l~~~~~~~~~v~~g~~v~~i~~ 202 (716)
-..+...|.+.+++.|+ ++++++++.+++.
T Consensus 210 -------------------------------~~~~~~~l~~~l~~~Gv-------------------~i~~~~~v~~i~~ 239 (463)
T 4dna_A 210 -------------------------------DQDMRRGLHAAMEEKGI-------------------RILCEDIIQSVSA 239 (463)
T ss_dssp -------------------------------CHHHHHHHHHHHHHTTC-------------------EEECSCCEEEEEE
T ss_pred -------------------------------CHHHHHHHHHHHHHCCC-------------------EEECCCEEEEEEE
Confidence 01233445666777777 9999999999998
Q ss_pred cCCe-EEEEEEeccCCceeeEEEEecEEEecCCCCh
Q 005056 203 TDQC-INVIASFLKEGKCTERNIQCNILIGTDGAGS 237 (716)
Q Consensus 203 ~~~g-v~v~v~~~~~g~~~~~~i~ad~VVgADG~~S 237 (716)
++++ +.++. .++| . +.+|.||.|-|...
T Consensus 240 ~~~~~~~v~~--~~~g----~-i~aD~Vv~a~G~~p 268 (463)
T 4dna_A 240 DADGRRVATT--MKHG----E-IVADQVMLALGRMP 268 (463)
T ss_dssp CTTSCEEEEE--SSSC----E-EEESEEEECSCEEE
T ss_pred cCCCEEEEEE--cCCC----e-EEeCEEEEeeCccc
Confidence 7666 34431 1244 2 89999999999654
No 247
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=96.87 E-value=0.0035 Score=66.45 Aligned_cols=34 Identities=15% Similarity=0.254 Sum_probs=29.8
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCC
Q 005056 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~ 77 (716)
.+|+|||||++|+-+|..|++.|.+|+|+++.+.
T Consensus 167 ~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~~ 200 (369)
T 3d1c_A 167 GQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTG 200 (369)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECC---
T ss_pred CEEEEECCCcCHHHHHHHHHhcCCeEEEEecCCC
Confidence 4799999999999999999999999999998764
No 248
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=96.86 E-value=0.0069 Score=62.45 Aligned_cols=35 Identities=20% Similarity=0.398 Sum_probs=32.0
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCC
Q 005056 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~ 78 (716)
-.|+|||+|++|+-+|..|++.|.+|+++++.+..
T Consensus 148 ~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~~ 182 (315)
T 3r9u_A 148 KEVAVLGGGDTALEEALYLANICSKIYLIHRRDEF 182 (315)
T ss_dssp SEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSSC
T ss_pred CEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCCC
Confidence 57999999999999999999999999999987643
No 249
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=96.86 E-value=0.00059 Score=76.68 Aligned_cols=38 Identities=21% Similarity=0.363 Sum_probs=33.1
Q ss_pred CccCCEEEECCCHHHHHHHHHHHh-CCCCEEEECCCCCC
Q 005056 41 EAVVPVLIVGAGPVGLVLSILLTK-LGIKCSVLEKNKAF 78 (716)
Q Consensus 41 ~~~~dVlIVGaGpaGLt~Al~Lar-~Gi~v~liEr~~~~ 78 (716)
..++|+||||||++|+++|..|++ .|++|+|||+.+..
T Consensus 15 ~~~yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG~~~ 53 (526)
T 3t37_A 15 APNCDIVIVGGGSAGSLLAARLSEDPDSRVLLIEAGEEP 53 (526)
T ss_dssp --CEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSBCC
T ss_pred CCCeeEEEECccHHHHHHHHHHHhCCCCeEEEEcCCCCC
Confidence 346999999999999999999998 68999999998653
No 250
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=96.84 E-value=0.00055 Score=77.22 Aligned_cols=37 Identities=32% Similarity=0.395 Sum_probs=33.9
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCC
Q 005056 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (716)
Q Consensus 41 ~~~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~ 78 (716)
..++|+||||||++|+++|..|++ |.+|+|||+.+..
T Consensus 24 ~~~yD~IIVGsG~AG~v~A~rLse-g~~VlvLEaG~~~ 60 (536)
T 1ju2_A 24 EGSYDYVIVGGGTSGCPLAATLSE-KYKVLVLERGSLP 60 (536)
T ss_dssp EEEEEEEEECCSTTHHHHHHHHTT-TSCEEEECSSBCG
T ss_pred cCcccEEEECccHHHHHHHHHHhc-CCcEEEEecCCCc
Confidence 456999999999999999999999 9999999998754
No 251
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=96.84 E-value=0.00067 Score=75.00 Aligned_cols=36 Identities=25% Similarity=0.365 Sum_probs=33.2
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCC--CCEEEECCCCCC
Q 005056 43 VVPVLIVGAGPVGLVLSILLTKLG--IKCSVLEKNKAF 78 (716)
Q Consensus 43 ~~dVlIVGaGpaGLt~Al~Lar~G--i~v~liEr~~~~ 78 (716)
.++|+||||||+|+.+|..|+++| ++|+|||+.+.+
T Consensus 6 ~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~ 43 (460)
T 1cjc_A 6 TPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVP 43 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSS
T ss_pred CceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcC
Confidence 479999999999999999999999 999999998753
No 252
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=96.80 E-value=0.00083 Score=81.67 Aligned_cols=37 Identities=24% Similarity=0.522 Sum_probs=33.5
Q ss_pred ccCCEEEECCCHHHHHHHHHHHhCCC-CEEEECCCCCC
Q 005056 42 AVVPVLIVGAGPVGLVLSILLTKLGI-KCSVLEKNKAF 78 (716)
Q Consensus 42 ~~~dVlIVGaGpaGLt~Al~Lar~Gi-~v~liEr~~~~ 78 (716)
...+|+||||||+||++|..|+++|+ +|+||||.+.+
T Consensus 186 ~~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~~ 223 (1025)
T 1gte_A 186 YSAKIALLGAGPASISCASFLARLGYSDITIFEKQEYV 223 (1025)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSC
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCCC
Confidence 35799999999999999999999999 79999998643
No 253
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=96.78 E-value=0.0048 Score=70.32 Aligned_cols=105 Identities=17% Similarity=0.331 Sum_probs=75.6
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCCCCCCCeeeeChhHHHHHHhhhchHHHHHhcCCCccccceeEEeec
Q 005056 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCTS 123 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~~~~p~a~~i~~rtmeilr~l~Gl~~~l~~~~~~~~~~~~~~~~~~ 123 (716)
-+|+|||||++|+-+|..|++.|.+|+|+|+.+..... +
T Consensus 188 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~----------------~------------------------- 226 (588)
T 3ics_A 188 RHATVIGGGFIGVEMVENLRERGIEVTLVEMANQVMPP----------------I------------------------- 226 (588)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT----------------S-------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccccc----------------C-------------------------
Confidence 57999999999999999999999999999987643210 0
Q ss_pred CCCCceeeccCCCccccccccCCccccccChHHHHHHHHHHHHhcCceeecccccccccccccccceEEeCcEEEEEEec
Q 005056 124 VTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSAT 203 (716)
Q Consensus 124 ~~g~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~l~~~~~~~~~v~~g~~v~~i~~~ 203 (716)
...+...|.+.+++.|+ ++++++++++++.+
T Consensus 227 ------------------------------~~~~~~~l~~~l~~~GV-------------------~i~~~~~v~~i~~~ 257 (588)
T 3ics_A 227 ------------------------------DYEMAAYVHEHMKNHDV-------------------ELVFEDGVDALEEN 257 (588)
T ss_dssp ------------------------------CHHHHHHHHHHHHHTTC-------------------EEECSCCEEEEEGG
T ss_pred ------------------------------CHHHHHHHHHHHHHcCC-------------------EEEECCeEEEEecC
Confidence 01123345555666776 89999999999876
Q ss_pred CCeEEEEEEeccCCceeeEEEEecEEEecCCCChh--hhhhcCCCc
Q 005056 204 DQCINVIASFLKEGKCTERNIQCNILIGTDGAGST--VRKLVGIDL 247 (716)
Q Consensus 204 ~~gv~v~v~~~~~g~~~~~~i~ad~VVgADG~~S~--VR~~lgi~~ 247 (716)
+++| ++. +|+ ++.+|.||.|-|.... .-+.+|+..
T Consensus 258 ~~~v--~~~---~g~----~i~~D~Vi~a~G~~p~~~~l~~~g~~~ 294 (588)
T 3ics_A 258 GAVV--RLK---SGS----VIQTDMLILAIGVQPESSLAKGAGLAL 294 (588)
T ss_dssp GTEE--EET---TSC----EEECSEEEECSCEEECCHHHHHTTCCB
T ss_pred CCEE--EEC---CCC----EEEcCEEEEccCCCCChHHHHhcCceE
Confidence 5553 332 453 6899999999997643 334556554
No 254
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=96.71 E-value=0.0062 Score=63.85 Aligned_cols=35 Identities=11% Similarity=0.330 Sum_probs=31.9
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCC
Q 005056 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (716)
Q Consensus 43 ~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~ 77 (716)
.-.|+|||+|++|+-+|..|++.|.+|+++++.+.
T Consensus 155 ~~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~ 189 (335)
T 2a87_A 155 DQDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDE 189 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCc
Confidence 35799999999999999999999999999998754
No 255
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=96.70 E-value=0.0012 Score=75.22 Aligned_cols=38 Identities=32% Similarity=0.336 Sum_probs=35.2
Q ss_pred CccCCEEEECCCHHHHHHHHHHHh-CCCCEEEECCCCCC
Q 005056 41 EAVVPVLIVGAGPVGLVLSILLTK-LGIKCSVLEKNKAF 78 (716)
Q Consensus 41 ~~~~dVlIVGaGpaGLt~Al~Lar-~Gi~v~liEr~~~~ 78 (716)
+.++|++|||+|++|+++|..|++ .|++|+|||+....
T Consensus 22 ~~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~~~ 60 (587)
T 1gpe_A 22 GKTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFYE 60 (587)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSCCC
T ss_pred cccCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCCcc
Confidence 567999999999999999999999 79999999998755
No 256
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=96.70 E-value=0.0058 Score=63.54 Aligned_cols=96 Identities=15% Similarity=0.218 Sum_probs=70.3
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCCCCCCCeeeeChhHHHHHHhhhchHHHHHhcCCCccccceeEEee
Q 005056 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCT 122 (716)
Q Consensus 43 ~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~~~~p~a~~i~~rtmeilr~l~Gl~~~l~~~~~~~~~~~~~~~~~ 122 (716)
.-+|+|||+|++|+-+|..|++.|.+|+++++.+.... ..+
T Consensus 154 ~~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~~~~~--------------------~~~------------------- 194 (332)
T 3lzw_A 154 GRRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDKFRA--------------------HEH------------------- 194 (332)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTTBSEEEEECSSSSCSS--------------------CHH-------------------
T ss_pred CCEEEEECCCHhHHHHHHHHHhhCCeEEEEEecCcCCc--------------------cHH-------------------
Confidence 35799999999999999999999999999998754210 000
Q ss_pred cCCCCceeeccCCCccccccccCCccccccChHHHHHHHHHHHHhcCceeecccccccccccccccceEEeCcEEEEEEe
Q 005056 123 SVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSA 202 (716)
Q Consensus 123 ~~~g~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~l~~~~~~~~~v~~g~~v~~i~~ 202 (716)
..+.+++.|+ +++.++++++++.
T Consensus 195 --------------------------------------~~~~l~~~gv-------------------~~~~~~~v~~i~~ 217 (332)
T 3lzw_A 195 --------------------------------------SVENLHASKV-------------------NVLTPFVPAELIG 217 (332)
T ss_dssp --------------------------------------HHHHHHHSSC-------------------EEETTEEEEEEEC
T ss_pred --------------------------------------HHHHHhcCCe-------------------EEEeCceeeEEec
Confidence 0112345565 8999999999988
Q ss_pred cCCeEEEEEEeccCCceeeEEEEecEEEecCCCC
Q 005056 203 TDQCINVIASFLKEGKCTERNIQCNILIGTDGAG 236 (716)
Q Consensus 203 ~~~gv~v~v~~~~~g~~~~~~i~ad~VVgADG~~ 236 (716)
+++.+.+++.+..+++ ..++.+|.||-|-|..
T Consensus 218 ~~~~~~v~~~~~~~g~--~~~~~~D~vv~a~G~~ 249 (332)
T 3lzw_A 218 EDKIEQLVLEEVKGDR--KEILEIDDLIVNYGFV 249 (332)
T ss_dssp SSSCCEEEEEETTSCC--EEEEECSEEEECCCEE
T ss_pred CCceEEEEEEecCCCc--eEEEECCEEEEeeccC
Confidence 7766566666433443 3578999999998854
No 257
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=96.69 E-value=0.0051 Score=68.63 Aligned_cols=59 Identities=22% Similarity=0.303 Sum_probs=41.9
Q ss_pred HHHHHHHHHHHhcCceeecccccccccccccccceEEeCcEEEEEEecCCeEEEEEEeccCCceeeEEEEecEEEecCCC
Q 005056 156 KLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSATDQCINVIASFLKEGKCTERNIQCNILIGTDGA 235 (716)
Q Consensus 156 ~Le~~L~~~~~~~g~~~~~~~~~~~l~~~~~~~~~v~~g~~v~~i~~~~~gv~v~v~~~~~g~~~~~~i~ad~VVgADG~ 235 (716)
.+...+.+.+++.|+ +|+++++|++++. +++.+.... .+|+....+|.+|+||-|-|.
T Consensus 273 ~~~~~~~~~L~~~GV-------------------~v~~~~~v~~v~~--~~~~~~~~~-~dg~~~~~~i~ad~viwa~Gv 330 (502)
T 4g6h_A 273 KLSSYAQSHLENTSI-------------------KVHLRTAVAKVEE--KQLLAKTKH-EDGKITEETIPYGTLIWATGN 330 (502)
T ss_dssp HHHHHHHHHHHHTTC-------------------EEETTEEEEEECS--SEEEEEEEC-TTSCEEEEEEECSEEEECCCE
T ss_pred HHHHHHHHHHHhcce-------------------eeecCceEEEEeC--CceEEEEEe-cCcccceeeeccCEEEEccCC
Confidence 344556667778887 9999999999864 555554442 345444568999999999995
Q ss_pred C
Q 005056 236 G 236 (716)
Q Consensus 236 ~ 236 (716)
.
T Consensus 331 ~ 331 (502)
T 4g6h_A 331 K 331 (502)
T ss_dssp E
T ss_pred c
Confidence 3
No 258
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=96.68 E-value=0.001 Score=75.45 Aligned_cols=37 Identities=19% Similarity=0.271 Sum_probs=34.0
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCC-CCEEEECCCCC
Q 005056 41 EAVVPVLIVGAGPVGLVLSILLTKLG-IKCSVLEKNKA 77 (716)
Q Consensus 41 ~~~~dVlIVGaGpaGLt~Al~Lar~G-i~v~liEr~~~ 77 (716)
..++|+||||||.+|+++|..|++.| ++|+|||+.+.
T Consensus 4 ~~~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEaG~~ 41 (577)
T 3q9t_A 4 GSHFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAGIG 41 (577)
T ss_dssp TCEEEEEEESCSHHHHHHHHHHTTSTTSCEEEECSSCS
T ss_pred CCcccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 35699999999999999999999998 89999999876
No 259
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=96.66 E-value=0.001 Score=74.35 Aligned_cols=38 Identities=24% Similarity=0.448 Sum_probs=34.3
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCC
Q 005056 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (716)
Q Consensus 41 ~~~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~ 78 (716)
+.++||+|||+|++|+++|..|++.|++|+|||+....
T Consensus 3 ~~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~~ 40 (504)
T 1n4w_A 3 GGYVPAVVIGTGYGAAVSALRLGEAGVQTLMLEMGQLW 40 (504)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCC
Confidence 34689999999999999999999999999999998743
No 260
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=96.62 E-value=0.0078 Score=66.07 Aligned_cols=34 Identities=18% Similarity=0.435 Sum_probs=31.8
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCC
Q 005056 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~ 77 (716)
-+|+|||||++|+-+|..|++.|.+|+|+|+.+.
T Consensus 149 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 182 (449)
T 3kd9_A 149 ENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGER 182 (449)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCc
Confidence 4899999999999999999999999999998764
No 261
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=96.61 E-value=0.0015 Score=73.17 Aligned_cols=38 Identities=32% Similarity=0.586 Sum_probs=34.8
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCC
Q 005056 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (716)
Q Consensus 41 ~~~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~ 78 (716)
+.++|++|||+|++|+++|..|++.|.+|+|||+....
T Consensus 9 ~~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~~ 46 (507)
T 1coy_A 9 GDRVPALVIGSGYGGAVAALRLTQAGIPTQIVEMGRSW 46 (507)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCC
Confidence 45699999999999999999999999999999998753
No 262
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=96.57 E-value=0.023 Score=64.78 Aligned_cols=32 Identities=28% Similarity=0.380 Sum_probs=30.3
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEECCC
Q 005056 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKN 75 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~ 75 (716)
-+|+|||||++|+-+|..|++.|.+|+|+++.
T Consensus 287 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~ 318 (598)
T 2x8g_A 287 GKTLVIGASYVALECAGFLASLGGDVTVMVRS 318 (598)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEECC
Confidence 47999999999999999999999999999986
No 263
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=96.56 E-value=0.00098 Score=76.94 Aligned_cols=36 Identities=28% Similarity=0.457 Sum_probs=33.3
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCC--------CCEEEECCCC-CC
Q 005056 43 VVPVLIVGAGPVGLVLSILLTKLG--------IKCSVLEKNK-AF 78 (716)
Q Consensus 43 ~~dVlIVGaGpaGLt~Al~Lar~G--------i~v~liEr~~-~~ 78 (716)
..+|+|||||++||++|..|++.| ++|+|||+++ ..
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~~~~r~ 100 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEADPDSF 100 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCTTBG
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEeccCccc
Confidence 468999999999999999999999 9999999987 55
No 264
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=96.55 E-value=0.001 Score=74.34 Aligned_cols=37 Identities=16% Similarity=0.170 Sum_probs=33.3
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCC
Q 005056 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (716)
Q Consensus 41 ~~~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~ 77 (716)
..+.+|||||||++|+++|..|++.+++|+|||+++.
T Consensus 40 ~~KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~~ 76 (502)
T 4g6h_A 40 SDKPNVLILGSGWGAISFLKHIDTKKYNVSIISPRSY 76 (502)
T ss_dssp CSSCEEEEECSSHHHHHHHHHSCTTTCEEEEEESSSE
T ss_pred CCCCCEEEECCcHHHHHHHHHhhhCCCcEEEECCCCC
Confidence 3456899999999999999999999999999999863
No 265
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=96.54 E-value=0.013 Score=65.55 Aligned_cols=34 Identities=24% Similarity=0.311 Sum_probs=31.6
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCC
Q 005056 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~ 77 (716)
-+|+|||||++|+-+|..|++.|.+|+++++.+.
T Consensus 356 k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~~ 389 (521)
T 1hyu_A 356 KRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPE 389 (521)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHBSEEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCcc
Confidence 5799999999999999999999999999998764
No 266
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=96.49 E-value=0.0018 Score=73.10 Aligned_cols=37 Identities=16% Similarity=0.308 Sum_probs=34.3
Q ss_pred ccCCEEEECCCHHHHHHHHHHHhC-CCCEEEECCCCCC
Q 005056 42 AVVPVLIVGAGPVGLVLSILLTKL-GIKCSVLEKNKAF 78 (716)
Q Consensus 42 ~~~dVlIVGaGpaGLt~Al~Lar~-Gi~v~liEr~~~~ 78 (716)
.++||+|||+|++|+++|..|++. |.+|+|||+....
T Consensus 12 ~~~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~g~~~ 49 (546)
T 2jbv_A 12 REFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGPDD 49 (546)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSCCC
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCCEEEEecCCcC
Confidence 569999999999999999999998 9999999998754
No 267
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=96.48 E-value=0.012 Score=65.03 Aligned_cols=36 Identities=22% Similarity=0.477 Sum_probs=32.7
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCC
Q 005056 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (716)
Q Consensus 43 ~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~ 78 (716)
.-.|+|||||++|+-+|..|++.|.+|+|+++.+..
T Consensus 172 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~ 207 (466)
T 3l8k_A 172 PQDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDRA 207 (466)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcC
Confidence 357999999999999999999999999999987643
No 268
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=96.47 E-value=0.0076 Score=65.99 Aligned_cols=34 Identities=29% Similarity=0.403 Sum_probs=31.7
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCC
Q 005056 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~ 77 (716)
..|+|||||++|+-+|..|++.|.+|+|+|+.+.
T Consensus 148 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ 181 (437)
T 4eqs_A 148 DKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDK 181 (437)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSC
T ss_pred cEEEEECCccchhhhHHHHHhcCCcceeeeeecc
Confidence 4799999999999999999999999999998764
No 269
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=96.47 E-value=0.0016 Score=73.93 Aligned_cols=36 Identities=31% Similarity=0.403 Sum_probs=33.1
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhC-CCCEEEECCCC
Q 005056 41 EAVVPVLIVGAGPVGLVLSILLTKL-GIKCSVLEKNK 76 (716)
Q Consensus 41 ~~~~dVlIVGaGpaGLt~Al~Lar~-Gi~v~liEr~~ 76 (716)
...+|+||||||.+|+++|..|+.. |++|+|||+.+
T Consensus 17 ~~~yDyIIVGgG~AG~vlA~RLse~~~~~VLlLEaG~ 53 (583)
T 3qvp_A 17 GRTVDYIIAGGGLTGLTTAARLTENPNISVLVIESGS 53 (583)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHTTSTTCCEEEECSSC
T ss_pred CCCccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCC
Confidence 4569999999999999999999975 89999999987
No 270
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=96.46 E-value=0.0028 Score=72.29 Aligned_cols=40 Identities=10% Similarity=0.272 Sum_probs=36.7
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCCCC
Q 005056 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFST 80 (716)
Q Consensus 41 ~~~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~~~ 80 (716)
.+++||+|||+|..|..+|..|++.|.+|++|||++....
T Consensus 6 ~~~~D~~i~GtGl~~~~~a~~~~~~g~~vl~id~~~~~gg 45 (650)
T 1vg0_A 6 PSDFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYGG 45 (650)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCG
T ss_pred CCcCCEEEECCcHHHHHHHHHHHhCCCEEEEEcCCCcccC
Confidence 3479999999999999999999999999999999987643
No 271
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=96.22 E-value=0.0017 Score=73.41 Aligned_cols=36 Identities=31% Similarity=0.352 Sum_probs=33.0
Q ss_pred cCCEEEECCCHHHHHHHHHHHh-CCCCEEEECCCCCC
Q 005056 43 VVPVLIVGAGPVGLVLSILLTK-LGIKCSVLEKNKAF 78 (716)
Q Consensus 43 ~~dVlIVGaGpaGLt~Al~Lar-~Gi~v~liEr~~~~ 78 (716)
++|+||||||++|+++|..|++ .|++|+|||+.+..
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~~~ 38 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGVSD 38 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSBCC
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCCcc
Confidence 4899999999999999999998 69999999998654
No 272
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=95.86 E-value=0.0049 Score=69.42 Aligned_cols=54 Identities=15% Similarity=0.126 Sum_probs=41.7
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCCCCCCCeeeeChhHHHHHH
Q 005056 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFR 96 (716)
Q Consensus 43 ~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~~~~p~a~~i~~rtmeilr 96 (716)
.-+|+|||+|.+|+-+|..|++.|.+|+|++|.+.........-+.+...+.|+
T Consensus 178 ~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~~i~p~~~~~~~~~~~~~l~ 231 (540)
T 3gwf_A 178 GRRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQYSVPVGNRPVNPEQIAEIK 231 (540)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCCCEEECCCCBCCHHHHHHHH
T ss_pred cceEEEECCCchHHHHHHHHHhhCCEEEEEECCCCccccCccCCCCHHHHHHHH
Confidence 458999999999999999999999999999999873111112345666666666
No 273
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=95.85 E-value=0.05 Score=59.86 Aligned_cols=36 Identities=17% Similarity=0.322 Sum_probs=31.7
Q ss_pred cCCEEEECCCHHHHHHHHHHH--------------------hCCC-CEEEECCCCCC
Q 005056 43 VVPVLIVGAGPVGLVLSILLT--------------------KLGI-KCSVLEKNKAF 78 (716)
Q Consensus 43 ~~dVlIVGaGpaGLt~Al~La--------------------r~Gi-~v~liEr~~~~ 78 (716)
.-.|+|||+|.+|+-+|..|+ +.|+ +|+|++|+...
T Consensus 145 ~~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~~~~ 201 (460)
T 1cjc_A 145 CDTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGPL 201 (460)
T ss_dssp SSEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCGG
T ss_pred CCEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEcCChH
Confidence 358999999999999999999 6798 69999998743
No 274
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=95.71 E-value=0.011 Score=66.58 Aligned_cols=55 Identities=13% Similarity=0.173 Sum_probs=41.9
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCCCCCCCeeeeChhHHHHHHh
Q 005056 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRK 97 (716)
Q Consensus 43 ~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~~~~p~a~~i~~rtmeilr~ 97 (716)
.-+|+|||+|++|+-+|..|++.+.+|+||+|.+.........-+.+...+.|+.
T Consensus 185 ~krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~~~i~p~~~~~~~~~~~~~l~~ 239 (545)
T 3uox_A 185 GKRVGVIGTGATGVQIIPIAAETAKELYVFQRTPNWCTPLGNSPMSKEKMDSLRN 239 (545)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTTBSEEEEEESSCCCCEECCCCBCCHHHHHHHHH
T ss_pred CCeEEEECCCccHHHHHHHHHhhCCEEEEEEcCCCccccCCcCCCCHHHHHHHHh
Confidence 3579999999999999999999999999999998642111123456666666653
No 275
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=95.64 E-value=0.033 Score=64.69 Aligned_cols=34 Identities=21% Similarity=0.256 Sum_probs=31.2
Q ss_pred CCEEEEC--CCHHHHHHHHHHHhCCCCEEEECCCCC
Q 005056 44 VPVLIVG--AGPVGLVLSILLTKLGIKCSVLEKNKA 77 (716)
Q Consensus 44 ~dVlIVG--aGpaGLt~Al~Lar~Gi~v~liEr~~~ 77 (716)
-+|+||| ||.+|+-+|..|++.|.+|+++++.+.
T Consensus 524 ~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~ 559 (690)
T 3k30_A 524 KKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQ 559 (690)
T ss_dssp SEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CEEEEEcCCCCccHHHHHHHHHhCCCeeEEEecccc
Confidence 4699999 999999999999999999999998764
No 276
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=95.59 E-value=0.012 Score=53.31 Aligned_cols=36 Identities=31% Similarity=0.380 Sum_probs=32.8
Q ss_pred ccCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCC
Q 005056 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (716)
Q Consensus 42 ~~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~ 77 (716)
.+-.|+|||+|..|..+|..|.+.|++|+++|+++.
T Consensus 6 ~~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~ 41 (140)
T 3fwz_A 6 ICNHALLVGYGRVGSLLGEKLLASDIPLVVIETSRT 41 (140)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 346899999999999999999999999999999753
No 277
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=95.44 E-value=0.011 Score=54.71 Aligned_cols=36 Identities=25% Similarity=0.396 Sum_probs=32.6
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCC
Q 005056 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (716)
Q Consensus 43 ~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~ 78 (716)
...|+|+|+|..|+.+|..|.+.|++|+++++++..
T Consensus 19 ~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~~ 54 (155)
T 2g1u_A 19 SKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEYA 54 (155)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGG
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHH
Confidence 357999999999999999999999999999997643
No 278
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=95.40 E-value=0.012 Score=63.36 Aligned_cols=36 Identities=19% Similarity=0.191 Sum_probs=33.6
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCCC
Q 005056 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFS 79 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~~ 79 (716)
-+|+|||||++|+-+|..|++.|.+|+|+|+.+.+.
T Consensus 147 ~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l 182 (385)
T 3klj_A 147 GKAFIIGGGILGIELAQAIIDSGTPASIGIILEYPL 182 (385)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSC
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccc
Confidence 589999999999999999999999999999998754
No 279
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=95.35 E-value=0.018 Score=53.03 Aligned_cols=35 Identities=11% Similarity=0.180 Sum_probs=32.1
Q ss_pred ccCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCC
Q 005056 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (716)
Q Consensus 42 ~~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~ 76 (716)
.+-.|+|+|+|.+|..+|..|.+.|++|+++|+++
T Consensus 2 ~~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~ 36 (153)
T 1id1_A 2 RKDHFIVCGHSILAINTILQLNQRGQNVTVISNLP 36 (153)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 34679999999999999999999999999999974
No 280
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=95.16 E-value=0.04 Score=56.01 Aligned_cols=33 Identities=12% Similarity=0.324 Sum_probs=29.9
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCC
Q 005056 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (716)
Q Consensus 43 ~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~ 76 (716)
..+|+|||+|++|+-+|..|++.| +|+++++.+
T Consensus 141 ~~~v~vvG~G~~~~e~a~~l~~~g-~v~~v~~~~ 173 (297)
T 3fbs_A 141 QGKIGVIAASPMAIHHALMLPDWG-ETTFFTNGI 173 (297)
T ss_dssp TCEEEEECCSTTHHHHHHHGGGTS-EEEEECTTT
T ss_pred CCEEEEEecCccHHHHHHHhhhcC-cEEEEECCC
Confidence 358999999999999999999999 999998765
No 281
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=95.03 E-value=0.091 Score=57.67 Aligned_cols=36 Identities=19% Similarity=0.392 Sum_probs=30.8
Q ss_pred cCCEEEECCCHHHHHHHHHHHhC--------------------CC-CEEEECCCCCC
Q 005056 43 VVPVLIVGAGPVGLVLSILLTKL--------------------GI-KCSVLEKNKAF 78 (716)
Q Consensus 43 ~~dVlIVGaGpaGLt~Al~Lar~--------------------Gi-~v~liEr~~~~ 78 (716)
.-.|+|||+|.+|+-+|..|++. |. +|+|++|+...
T Consensus 147 ~~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~~~ 203 (456)
T 1lqt_A 147 GARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGPL 203 (456)
T ss_dssp SSEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCGG
T ss_pred CCEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCChh
Confidence 35799999999999999999974 65 89999988743
No 282
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=94.96 E-value=0.02 Score=51.76 Aligned_cols=33 Identities=27% Similarity=0.394 Sum_probs=30.9
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEECCCC
Q 005056 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~ 76 (716)
..|+|+|+|..|..+|..|.++|++|+++|+++
T Consensus 7 ~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 479999999999999999999999999999864
No 283
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=94.83 E-value=0.022 Score=51.01 Aligned_cols=33 Identities=27% Similarity=0.495 Sum_probs=30.6
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEECCCC
Q 005056 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~ 76 (716)
..|+|||+|..|..+|..|.+.|++|+++|+++
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~ 37 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDK 37 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 479999999999999999999999999999864
No 284
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=94.79 E-value=0.069 Score=64.34 Aligned_cols=34 Identities=12% Similarity=0.133 Sum_probs=31.6
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCC
Q 005056 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~ 77 (716)
-.|+|||+|+.|+-+|..|++.|.+|+|+|+.+.
T Consensus 285 k~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~~ 318 (965)
T 2gag_A 285 ARIAVATTNDSAYELVRELAATGGVVAVIDARSS 318 (965)
T ss_dssp SSEEEEESSTTHHHHHHHHGGGTCCSEEEESCSS
T ss_pred CeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCCc
Confidence 5799999999999999999999999999998764
No 285
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=94.51 E-value=0.11 Score=60.52 Aligned_cols=33 Identities=15% Similarity=0.140 Sum_probs=31.1
Q ss_pred CCEEEEC--CCHHHHHHHHHHHhCCCCEEEECCCC
Q 005056 44 VPVLIVG--AGPVGLVLSILLTKLGIKCSVLEKNK 76 (716)
Q Consensus 44 ~dVlIVG--aGpaGLt~Al~Lar~Gi~v~liEr~~ 76 (716)
-+|+||| ||.+|+-+|..|++.|.+|+|+++.+
T Consensus 529 k~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~ 563 (729)
T 1o94_A 529 KRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH 563 (729)
T ss_dssp SEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc
Confidence 5799998 99999999999999999999999876
No 286
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=94.51 E-value=0.2 Score=54.54 Aligned_cols=43 Identities=12% Similarity=0.055 Sum_probs=28.9
Q ss_pred eEEeCcEEEEEEecCCeEEEEEEeccCCc-eeeEEEEecEEEecCCC
Q 005056 190 EILMGHECVSVSATDQCINVIASFLKEGK-CTERNIQCNILIGTDGA 235 (716)
Q Consensus 190 ~v~~g~~v~~i~~~~~gv~v~v~~~~~g~-~~~~~i~ad~VVgADG~ 235 (716)
++++++++++++. +++++.... .+|+ ....++.+|+||.|-|.
T Consensus 224 ~~~~~~~v~~v~~--~~v~~~~~~-~~g~~~~~~~i~~D~vv~~~g~ 267 (437)
T 3sx6_A 224 EAYTNCKVTKVED--NKMYVTQVD-EKGETIKEMVLPVKFGMMIPAF 267 (437)
T ss_dssp EEECSEEEEEEET--TEEEEEEEC-TTSCEEEEEEEECSEEEEECCE
T ss_pred EEEcCCEEEEEEC--CeEEEEecc-cCCccccceEEEEeEEEEcCCC
Confidence 9999999999974 455444322 2232 12357999999999873
No 287
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=94.45 E-value=0.028 Score=48.58 Aligned_cols=33 Identities=24% Similarity=0.460 Sum_probs=30.5
Q ss_pred CCEEEECCCHHHHHHHHHHHhCC-CCEEEECCCC
Q 005056 44 VPVLIVGAGPVGLVLSILLTKLG-IKCSVLEKNK 76 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar~G-i~v~liEr~~ 76 (716)
..|+|+|+|..|..++..|.++| .+|++++|++
T Consensus 6 ~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 6 WNICVVGAGKIGQMIAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCH
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCH
Confidence 47999999999999999999999 8999999864
No 288
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=94.43 E-value=0.14 Score=59.12 Aligned_cols=28 Identities=29% Similarity=0.439 Sum_probs=24.6
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEE
Q 005056 43 VVPVLIVGAGPVGLVLSILLTKLGIKCS 70 (716)
Q Consensus 43 ~~dVlIVGaGpaGLt~Al~Lar~Gi~v~ 70 (716)
.-+|+|||||++|+-+|..|++.|.+++
T Consensus 494 ~~~VvVIGgG~~g~E~A~~l~~~G~~vt 521 (671)
T 1ps9_A 494 GNKVAIIGCGGIGFDTAMYLSQPGESTS 521 (671)
T ss_dssp CSEEEEECCHHHHHHHHHHHTCCSSCGG
T ss_pred CCeEEEECCChhHHHHHHHHHhcCCCcc
Confidence 3589999999999999999999987653
No 289
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=94.30 E-value=0.031 Score=57.68 Aligned_cols=35 Identities=17% Similarity=0.408 Sum_probs=32.6
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCC
Q 005056 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~ 78 (716)
-+|+|||||++|+-+|..|++.|.+|+|+|+.+..
T Consensus 146 k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~ 180 (312)
T 4gcm_A 146 KRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDEL 180 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSC
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEeccccc
Confidence 47999999999999999999999999999998764
No 290
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=94.08 E-value=0.038 Score=52.38 Aligned_cols=34 Identities=26% Similarity=0.219 Sum_probs=31.5
Q ss_pred cCCEEEECCCHHHHHHHHHHHhC-CCCEEEECCCC
Q 005056 43 VVPVLIVGAGPVGLVLSILLTKL-GIKCSVLEKNK 76 (716)
Q Consensus 43 ~~dVlIVGaGpaGLt~Al~Lar~-Gi~v~liEr~~ 76 (716)
...|+|+|+|..|..+|..|.+. |++|+++|+++
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCH
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCH
Confidence 45799999999999999999999 99999999875
No 291
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=93.96 E-value=0.34 Score=58.69 Aligned_cols=33 Identities=15% Similarity=0.264 Sum_probs=30.7
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCC-CEEEECCCC
Q 005056 44 VPVLIVGAGPVGLVLSILLTKLGI-KCSVLEKNK 76 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar~Gi-~v~liEr~~ 76 (716)
-+|+|||||.+|+=+|..|.+.|. +|+|+++++
T Consensus 333 ~~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~ 366 (1025)
T 1gte_A 333 GAVIVLGAGDTAFDCATSALRCGARRVFLVFRKG 366 (1025)
T ss_dssp SEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CcEEEECCChHHHHHHHHHHHcCCCEEEEEEecC
Confidence 389999999999999999999997 899999876
No 292
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=93.86 E-value=0.049 Score=48.84 Aligned_cols=33 Identities=18% Similarity=0.332 Sum_probs=30.7
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEECCCC
Q 005056 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~ 76 (716)
..|+|+|+|..|..+|..|.+.|++|+++++++
T Consensus 7 ~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~ 39 (144)
T 2hmt_A 7 KQFAVIGLGRFGGSIVKELHRMGHEVLAVDINE 39 (144)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCCEEEESCH
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 369999999999999999999999999999864
No 293
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=93.24 E-value=0.055 Score=55.61 Aligned_cols=35 Identities=31% Similarity=0.549 Sum_probs=32.2
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCC
Q 005056 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~ 78 (716)
.+|+|||||..|+-+|..|++.|.+|+|+||....
T Consensus 153 ~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~~~ 187 (314)
T 4a5l_A 153 KVLMVVGGGDAAMEEALHLTKYGSKVIILHRRDAF 187 (314)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSC
T ss_pred CeEEEECCChHHHHHHHHHHHhCCeeeeecccccc
Confidence 57999999999999999999999999999987643
No 294
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=93.23 E-value=0.075 Score=55.23 Aligned_cols=38 Identities=18% Similarity=0.278 Sum_probs=33.3
Q ss_pred CCCccCCEEEECCCHHHHHHHHHHHhCCC-CEEEECCCC
Q 005056 39 SNEAVVPVLIVGAGPVGLVLSILLTKLGI-KCSVLEKNK 76 (716)
Q Consensus 39 ~~~~~~dVlIVGaGpaGLt~Al~Lar~Gi-~v~liEr~~ 76 (716)
|+|...+|.|||+|.+|.++|..|+..|+ +++|+|+.+
T Consensus 4 m~~~~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~~ 42 (315)
T 3tl2_A 4 MTIKRKKVSVIGAGFTGATTAFLLAQKELADVVLVDIPQ 42 (315)
T ss_dssp CCCCCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCGG
T ss_pred cccCCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeccc
Confidence 33445689999999999999999999999 999999874
No 295
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=93.14 E-value=0.053 Score=52.97 Aligned_cols=33 Identities=15% Similarity=0.299 Sum_probs=30.9
Q ss_pred CEEEECCCHHHHHHHHHHHhCCCCEEEECCCCC
Q 005056 45 PVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (716)
Q Consensus 45 dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~ 77 (716)
.|+|||+|..|..+|..|.+.|++|+++|+++.
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~~ 34 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKYGVVIINKDRE 34 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCCEEEEESCHH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 699999999999999999999999999998753
No 296
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=93.02 E-value=0.086 Score=55.24 Aligned_cols=34 Identities=18% Similarity=0.269 Sum_probs=31.5
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCC-CEEEECCCC
Q 005056 43 VVPVLIVGAGPVGLVLSILLTKLGI-KCSVLEKNK 76 (716)
Q Consensus 43 ~~dVlIVGaGpaGLt~Al~Lar~Gi-~v~liEr~~ 76 (716)
..+|.|||||-+|.++|..|++.|+ +++|+|+++
T Consensus 9 ~~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~ 43 (331)
T 1pzg_A 9 RKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVK 43 (331)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCh
Confidence 3589999999999999999999998 999999875
No 297
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=93.00 E-value=0.076 Score=57.16 Aligned_cols=36 Identities=25% Similarity=0.411 Sum_probs=33.4
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCCC
Q 005056 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFS 79 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~~ 79 (716)
-+|+|||+|++|+-+|..|++.|.+|+++|+.+.+.
T Consensus 143 ~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~ 178 (404)
T 3fg2_P 143 KHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRVM 178 (404)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTT
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcch
Confidence 579999999999999999999999999999987654
No 298
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=92.60 E-value=0.086 Score=57.93 Aligned_cols=37 Identities=30% Similarity=0.472 Sum_probs=33.6
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCCC
Q 005056 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFS 79 (716)
Q Consensus 43 ~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~~ 79 (716)
.-+|+|||||++|+-+|..|++.|.+|+|+|+.+.+.
T Consensus 176 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l 212 (467)
T 1zk7_A 176 PERLAVIGSSVVALELAQAFARLGSKVTVLARNTLFF 212 (467)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTT
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEEECCccC
Confidence 3579999999999999999999999999999987653
No 299
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=92.09 E-value=0.13 Score=52.45 Aligned_cols=33 Identities=18% Similarity=0.341 Sum_probs=31.1
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEECCCC
Q 005056 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~ 76 (716)
..|.|||+|..|...|..|++.|++|+++|+++
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~ 37 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINT 37 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 479999999999999999999999999999875
No 300
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=91.97 E-value=0.12 Score=53.72 Aligned_cols=33 Identities=30% Similarity=0.600 Sum_probs=30.7
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEECCCC
Q 005056 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~ 76 (716)
.+|+|||+|-.|.++|..|++.|.+|+++.|.+
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh
Confidence 479999999999999999999999999999853
No 301
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=91.85 E-value=0.14 Score=52.68 Aligned_cols=32 Identities=16% Similarity=0.385 Sum_probs=30.4
Q ss_pred CEEEECCCHHHHHHHHHHHhCCCCEEEECCCC
Q 005056 45 PVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (716)
Q Consensus 45 dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~ 76 (716)
.|.|||+|-.|..+|..|++.|++|+++|+++
T Consensus 17 ~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~ 48 (302)
T 1f0y_A 17 HVTVIGGGLMGAGIAQVAAATGHTVVLVDQTE 48 (302)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 69999999999999999999999999999875
No 302
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=91.78 E-value=0.15 Score=53.31 Aligned_cols=32 Identities=38% Similarity=0.470 Sum_probs=30.1
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEECCC
Q 005056 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKN 75 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~ 75 (716)
.+|.|||+|-.|.++|..|++.|.+|++++|.
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHTTCCEEEECCH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEECh
Confidence 47999999999999999999999999999974
No 303
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=91.78 E-value=0.12 Score=56.57 Aligned_cols=35 Identities=29% Similarity=0.348 Sum_probs=32.3
Q ss_pred ccCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCC
Q 005056 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (716)
Q Consensus 42 ~~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~ 76 (716)
....|+|||.|.+|+++|..|.++|++|.+.|++.
T Consensus 8 ~~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~ 42 (451)
T 3lk7_A 8 ENKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKP 42 (451)
T ss_dssp TTCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 34689999999999999999999999999999876
No 304
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=91.73 E-value=0.17 Score=49.66 Aligned_cols=34 Identities=21% Similarity=0.222 Sum_probs=31.3
Q ss_pred ccCCEEEECCCHHHHHHHHHHHhCCCCEEEECCC
Q 005056 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKN 75 (716)
Q Consensus 42 ~~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~ 75 (716)
....|||||||.+|...+..|.+.|.+|+|++..
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~ 63 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPT 63 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCC
Confidence 4468999999999999999999999999999864
No 305
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=91.58 E-value=0.17 Score=53.55 Aligned_cols=34 Identities=29% Similarity=0.522 Sum_probs=31.5
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCC
Q 005056 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (716)
Q Consensus 43 ~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~ 76 (716)
..+|.|||+|-.|.++|..|++.|.+|++++|++
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~ 62 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKGQKVRLWSYES 62 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCH
T ss_pred CCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 3589999999999999999999999999999864
No 306
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=91.23 E-value=0.15 Score=56.06 Aligned_cols=37 Identities=27% Similarity=0.389 Sum_probs=33.6
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCCC
Q 005056 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFS 79 (716)
Q Consensus 43 ~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~~ 79 (716)
.-.|+|||||++|+-+|..|++.|.+|+|+++.+.+.
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l 223 (478)
T 3dk9_A 187 PGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVL 223 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC
T ss_pred CccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCccc
Confidence 3579999999999999999999999999999987653
No 307
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=91.21 E-value=0.16 Score=53.49 Aligned_cols=33 Identities=15% Similarity=0.212 Sum_probs=30.8
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEECCCC
Q 005056 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~ 76 (716)
.+|.|||+|-.|..+|..|++.|++|++++|++
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~ 37 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDA 37 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 579999999999999999999999999999864
No 308
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=91.19 E-value=0.16 Score=52.57 Aligned_cols=32 Identities=34% Similarity=0.564 Sum_probs=29.8
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEECCC
Q 005056 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKN 75 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~ 75 (716)
.+|+|||+|-.|.++|..|++.|.+|+++.|.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~ 34 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRR 34 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECST
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcC
Confidence 47999999999999999999999999999985
No 309
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=91.11 E-value=0.18 Score=52.48 Aligned_cols=33 Identities=12% Similarity=0.371 Sum_probs=31.0
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCC-CEEEECCCC
Q 005056 44 VPVLIVGAGPVGLVLSILLTKLGI-KCSVLEKNK 76 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar~Gi-~v~liEr~~ 76 (716)
.+|.|||+|-.|.++|..|++.|+ +|+++|+++
T Consensus 5 ~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~ 38 (317)
T 2ewd_A 5 RKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAE 38 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCc
Confidence 579999999999999999999998 999999875
No 310
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=91.08 E-value=0.17 Score=55.65 Aligned_cols=37 Identities=32% Similarity=0.509 Sum_probs=33.7
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCCC
Q 005056 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFS 79 (716)
Q Consensus 43 ~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~~ 79 (716)
.-+|+|||||++|+-+|..|++.|.+|+|+|+.+...
T Consensus 180 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l 216 (476)
T 3lad_A 180 PGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKFL 216 (476)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcC
Confidence 3579999999999999999999999999999987653
No 311
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=91.01 E-value=0.16 Score=52.22 Aligned_cols=36 Identities=14% Similarity=0.158 Sum_probs=33.1
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCC
Q 005056 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (716)
Q Consensus 43 ~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~ 78 (716)
..+|.|||.|-.|..+|..|++.|++|++++|++..
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~ 50 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIEA 50 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTTT
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHHH
Confidence 468999999999999999999999999999998753
No 312
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=90.96 E-value=0.14 Score=55.91 Aligned_cols=35 Identities=23% Similarity=0.325 Sum_probs=32.2
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCC
Q 005056 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~ 78 (716)
..|+|||.|++|+++|..|+++|++|+++|.+...
T Consensus 6 ~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~~ 40 (439)
T 2x5o_A 6 KNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTP 40 (439)
T ss_dssp CCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSSC
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCCc
Confidence 47999999999999999999999999999988754
No 313
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=90.92 E-value=0.2 Score=52.07 Aligned_cols=35 Identities=23% Similarity=0.267 Sum_probs=30.9
Q ss_pred ccCCEEEECCCHHHHHHHHHHHhCCC--CEEEECCCC
Q 005056 42 AVVPVLIVGAGPVGLVLSILLTKLGI--KCSVLEKNK 76 (716)
Q Consensus 42 ~~~dVlIVGaGpaGLt~Al~Lar~Gi--~v~liEr~~ 76 (716)
...+|.|||+|-+|.++|+.|+..|+ +++++|.+.
T Consensus 6 ~~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~ 42 (318)
T 1y6j_A 6 SRSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFK 42 (318)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC-
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 34689999999999999999999998 899999875
No 314
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=90.90 E-value=3.3 Score=45.42 Aligned_cols=49 Identities=10% Similarity=0.083 Sum_probs=35.3
Q ss_pred ceEEeCcEEEEEEecCCe------EEEEEEeccCCceeeEEEEecEEEecCCCChhh
Q 005056 189 REILMGHECVSVSATDQC------INVIASFLKEGKCTERNIQCNILIGTDGAGSTV 239 (716)
Q Consensus 189 ~~v~~g~~v~~i~~~~~g------v~v~v~~~~~g~~~~~~i~ad~VVgADG~~S~V 239 (716)
.+|+++++|++|+.++++ +.|++.. .+|+. ..+++||.||.|-......
T Consensus 256 ~~i~~~~~V~~I~~~~~~~~~~~~~~v~~~~-~~g~~-~~~~~ad~VI~a~p~~~l~ 310 (504)
T 1sez_A 256 DELRLNSRVLELSCSCTEDSAIDSWSIISAS-PHKRQ-SEEESFDAVIMTAPLCDVK 310 (504)
T ss_dssp TTEETTCCEEEEEEECSSSSSSCEEEEEEBC-SSSSC-BCCCEESEEEECSCHHHHH
T ss_pred ceEEcCCeEEEEEecCCCCcccceEEEEEcC-CCCcc-ceeEECCEEEECCCHHHHH
Confidence 379999999999988877 6776642 23310 0267899999999876433
No 315
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=90.88 E-value=0.2 Score=53.56 Aligned_cols=35 Identities=26% Similarity=0.390 Sum_probs=32.4
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCC
Q 005056 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (716)
Q Consensus 43 ~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~ 77 (716)
...|+|+|+|++|+.+|..|...|.+|+++|+++.
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~ 224 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARRLGAVVSATDVRPA 224 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTT
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 46899999999999999999999999999999864
No 316
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=90.85 E-value=0.17 Score=54.72 Aligned_cols=34 Identities=32% Similarity=0.526 Sum_probs=31.9
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCC
Q 005056 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~ 77 (716)
..|+|||.|..|..+|..|.+.|++|++||+++.
T Consensus 5 ~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~ 38 (413)
T 3l9w_A 5 MRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPD 38 (413)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHH
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 5799999999999999999999999999999864
No 317
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=90.83 E-value=0.17 Score=52.68 Aligned_cols=34 Identities=29% Similarity=0.465 Sum_probs=31.6
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCC
Q 005056 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~ 77 (716)
..|.|||+|..|...|..|++.|++|+++|+++.
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~~ 40 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPR 40 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHH
T ss_pred ceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 4799999999999999999999999999998754
No 318
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=90.73 E-value=0.18 Score=52.41 Aligned_cols=34 Identities=29% Similarity=0.472 Sum_probs=31.1
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCC
Q 005056 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (716)
Q Consensus 43 ~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~ 76 (716)
..+|.|||+|.-|..-|..++.+|++|+|+|..+
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~ 39 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCeEEEECCcHHHHHHHHHHHhCCCeEEEEECCH
Confidence 3579999999999999999999999999999765
No 319
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=90.66 E-value=1.8 Score=47.55 Aligned_cols=44 Identities=9% Similarity=0.180 Sum_probs=34.5
Q ss_pred eEEeCcEEEEEEecCCeEEEEEEeccCCceeeEEEEecEEEecCCCC
Q 005056 190 EILMGHECVSVSATDQCINVIASFLKEGKCTERNIQCNILIGTDGAG 236 (716)
Q Consensus 190 ~v~~g~~v~~i~~~~~gv~v~v~~~~~g~~~~~~i~ad~VVgADG~~ 236 (716)
+|+++++|++|+.++++|++++. +|+....+++||+||.|-+..
T Consensus 254 ~i~~~~~V~~I~~~~~~v~v~~~---~~~~~~~~~~ad~vI~t~p~~ 297 (498)
T 2iid_A 254 KVHFNAQVIKIQQNDQKVTVVYE---TLSKETPSVTADYVIVCTTSR 297 (498)
T ss_dssp GEESSCEEEEEEECSSCEEEEEE---CSSSCCCEEEESEEEECSCHH
T ss_pred ccccCCEEEEEEECCCeEEEEEe---cCCcccceEEeCEEEECCChH
Confidence 79999999999999888887765 332112258999999999865
No 320
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=90.65 E-value=0.23 Score=51.79 Aligned_cols=33 Identities=21% Similarity=0.494 Sum_probs=30.8
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCC-CEEEECCCC
Q 005056 44 VPVLIVGAGPVGLVLSILLTKLGI-KCSVLEKNK 76 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar~Gi-~v~liEr~~ 76 (716)
.+|.|||||-+|.++|..|+..|+ +++|+|.+.
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~ 38 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVK 38 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCH
Confidence 479999999999999999999998 999999875
No 321
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=90.56 E-value=0.23 Score=51.92 Aligned_cols=33 Identities=21% Similarity=0.465 Sum_probs=31.0
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCC-CEEEECCCC
Q 005056 44 VPVLIVGAGPVGLVLSILLTKLGI-KCSVLEKNK 76 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar~Gi-~v~liEr~~ 76 (716)
.+|.|||||-.|.++|..|+..|+ +|+|+|++.
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~ 48 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIE 48 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSST
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCH
Confidence 579999999999999999999999 999999875
No 322
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=90.54 E-value=0.22 Score=50.51 Aligned_cols=33 Identities=18% Similarity=0.283 Sum_probs=31.0
Q ss_pred CEEEECCCHHHHHHHHHHHhCCCCEEEECCCCC
Q 005056 45 PVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (716)
Q Consensus 45 dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~ 77 (716)
+|.|||+|..|..+|..|++.|++|++++|++.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~ 34 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGHEVQGWLRVPQ 34 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred eEEEECcCHHHHHHHHHHHhCCCCEEEEEcCcc
Confidence 599999999999999999999999999999864
No 323
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=90.53 E-value=0.2 Score=52.19 Aligned_cols=34 Identities=35% Similarity=0.495 Sum_probs=30.6
Q ss_pred ccCCEEEECCCHHHHHHHHHHHhCCC--CEEEECCC
Q 005056 42 AVVPVLIVGAGPVGLVLSILLTKLGI--KCSVLEKN 75 (716)
Q Consensus 42 ~~~dVlIVGaGpaGLt~Al~Lar~Gi--~v~liEr~ 75 (716)
...+|.|||+|.+|.++|..|+..|+ +++++|.+
T Consensus 4 ~~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~ 39 (326)
T 3pqe_A 4 HVNKVALIGAGFVGSSYAFALINQGITDELVVIDVN 39 (326)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecc
Confidence 34679999999999999999999998 89999975
No 324
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=90.53 E-value=0.8 Score=49.48 Aligned_cols=53 Identities=9% Similarity=0.159 Sum_probs=36.3
Q ss_pred HHHHHHHHHhcCceeecccccccccccccccceEEeCcEEEEEEecCCeEEEEEEeccCCceeeEEEEecEEEecCCCC
Q 005056 158 NKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSATDQCINVIASFLKEGKCTERNIQCNILIGTDGAG 236 (716)
Q Consensus 158 e~~L~~~~~~~g~~~~~~~~~~~l~~~~~~~~~v~~g~~v~~i~~~~~gv~v~v~~~~~g~~~~~~i~ad~VVgADG~~ 236 (716)
...+.+.+++.|+ +++++++|++++. +++ ++...+ ++ ..++.+|+||.|-|..
T Consensus 203 ~~~l~~~l~~~GV-------------------~i~~~~~v~~v~~--~~v--~~~~~~-~~--g~~i~~D~vv~a~G~~ 255 (430)
T 3h28_A 203 KRLVEDLFAERNI-------------------DWIANVAVKAIEP--DKV--IYEDLN-GN--THEVPAKFTMFMPSFQ 255 (430)
T ss_dssp HHHHHHHHHHTTC-------------------EEECSCEEEEECS--SEE--EEECTT-SC--EEEEECSEEEEECEEE
T ss_pred HHHHHHHHHHCCC-------------------EEEeCCEEEEEeC--CeE--EEEecC-CC--ceEEeeeEEEECCCCc
Confidence 3445566777787 9999999999965 343 344222 22 3479999999998854
No 325
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=90.35 E-value=0.25 Score=51.39 Aligned_cols=35 Identities=20% Similarity=0.300 Sum_probs=31.6
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCC-CEEEECCCCC
Q 005056 43 VVPVLIVGAGPVGLVLSILLTKLGI-KCSVLEKNKA 77 (716)
Q Consensus 43 ~~dVlIVGaGpaGLt~Al~Lar~Gi-~v~liEr~~~ 77 (716)
..+|.|||+|.+|.++|..|+..|+ +++|+|.++.
T Consensus 5 ~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~~ 40 (321)
T 3p7m_A 5 RKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQG 40 (321)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCChH
Confidence 3579999999999999999999998 9999998763
No 326
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=90.34 E-value=0.14 Score=50.12 Aligned_cols=34 Identities=26% Similarity=0.373 Sum_probs=31.0
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEE-ECCCCC
Q 005056 44 VPVLIVGAGPVGLVLSILLTKLGIKCSV-LEKNKA 77 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar~Gi~v~l-iEr~~~ 77 (716)
.+|.|||+|-.|.++|..|++.|++|++ ++|++.
T Consensus 24 mkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~~ 58 (220)
T 4huj_A 24 TTYAIIGAGAIGSALAERFTAAQIPAIIANSRGPA 58 (220)
T ss_dssp CCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCGG
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCHH
Confidence 5799999999999999999999999999 888754
No 327
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=90.32 E-value=0.28 Score=50.67 Aligned_cols=35 Identities=20% Similarity=0.258 Sum_probs=31.9
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCC
Q 005056 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (716)
Q Consensus 43 ~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~ 77 (716)
..+|.|||+|-.|..+|..|++.|++|++++|++.
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~~ 64 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAE 64 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSSGG
T ss_pred CCeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCHH
Confidence 35799999999999999999999999999998754
No 328
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=90.31 E-value=0.18 Score=50.54 Aligned_cols=34 Identities=32% Similarity=0.471 Sum_probs=31.4
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCC-CEEEECCCC
Q 005056 43 VVPVLIVGAGPVGLVLSILLTKLGI-KCSVLEKNK 76 (716)
Q Consensus 43 ~~dVlIVGaGpaGLt~Al~Lar~Gi-~v~liEr~~ 76 (716)
...|+|||+|-.|..+|..|++.|+ +++|+|++.
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 4689999999999999999999999 789999875
No 329
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=90.27 E-value=0.26 Score=55.33 Aligned_cols=55 Identities=11% Similarity=0.155 Sum_probs=40.7
Q ss_pred ccCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCCCCCCCeeeeChhHHHHHH
Q 005056 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFR 96 (716)
Q Consensus 42 ~~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~~~~p~a~~i~~rtmeilr 96 (716)
..-+|+|||+|.+|+-+|..|++.|.+|+||+|.+.........-+.+...+.|+
T Consensus 190 ~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~~ilp~~~~~~~~~~~~~l~ 244 (549)
T 4ap3_A 190 TGKRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSANYSIPAGNVPLDDATRAEQK 244 (549)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCCCEEECC----CHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHhhCCEEEEEECCCCccccCcCCCCCHHHHHHHH
Confidence 3458999999999999999999999999999999864111112345666666776
No 330
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=90.25 E-value=0.27 Score=47.70 Aligned_cols=34 Identities=15% Similarity=0.282 Sum_probs=31.9
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCC
Q 005056 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~ 77 (716)
..|.|||+|-.|.++|..|++.|.+|++++|++.
T Consensus 20 ~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~ 53 (209)
T 2raf_A 20 MEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ 53 (209)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 4799999999999999999999999999999875
No 331
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=90.14 E-value=0.19 Score=51.50 Aligned_cols=33 Identities=21% Similarity=0.402 Sum_probs=31.0
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEECCCC
Q 005056 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~ 76 (716)
.+|+|||+|-.|.++|..|++.|.+|++++|+.
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~ 35 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHA 35 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSC
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEecc
Confidence 479999999999999999999999999999984
No 332
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=90.13 E-value=0.23 Score=51.41 Aligned_cols=33 Identities=27% Similarity=0.464 Sum_probs=30.6
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCC--CEEEECCCC
Q 005056 44 VPVLIVGAGPVGLVLSILLTKLGI--KCSVLEKNK 76 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar~Gi--~v~liEr~~ 76 (716)
.+|+|||+|-+|.++|..|++.|+ +|++++++.
T Consensus 8 mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~ 42 (319)
T 1lld_A 8 TKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAK 42 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 479999999999999999999999 999999864
No 333
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=90.12 E-value=0.23 Score=51.08 Aligned_cols=32 Identities=28% Similarity=0.499 Sum_probs=30.1
Q ss_pred CEEEECCCHHHHHHHHHHHhCCCCEEEECCCC
Q 005056 45 PVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (716)
Q Consensus 45 dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~ 76 (716)
+|.|||+|-.|..+|..|++.|++|++++|++
T Consensus 5 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 36 (316)
T 2ew2_A 5 KIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWP 36 (316)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred eEEEECcCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 69999999999999999999999999999864
No 334
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=90.09 E-value=0.22 Score=54.39 Aligned_cols=33 Identities=27% Similarity=0.584 Sum_probs=31.1
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEECCCC
Q 005056 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~ 76 (716)
.+|.|||+|-+|+.+|..|++.|++|+++++++
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~ 35 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDR 35 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCH
Confidence 479999999999999999999999999999875
No 335
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=90.04 E-value=0.27 Score=51.23 Aligned_cols=35 Identities=14% Similarity=0.267 Sum_probs=31.8
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCC-CEEEECCCCC
Q 005056 43 VVPVLIVGAGPVGLVLSILLTKLGI-KCSVLEKNKA 77 (716)
Q Consensus 43 ~~dVlIVGaGpaGLt~Al~Lar~Gi-~v~liEr~~~ 77 (716)
..+|.|||+|-+|.++|..|+..|+ +++|+|.++.
T Consensus 7 ~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~~ 42 (324)
T 3gvi_A 7 RNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAEG 42 (324)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCch
Confidence 3589999999999999999999999 9999998763
No 336
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=89.95 E-value=0.21 Score=55.27 Aligned_cols=102 Identities=20% Similarity=0.337 Sum_probs=77.6
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCCCCCCCeeeeChhHHHHHHhhhchHHHHHhcCCCccccceeEEee
Q 005056 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCT 122 (716)
Q Consensus 43 ~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~~~~p~a~~i~~rtmeilr~l~Gl~~~l~~~~~~~~~~~~~~~~~ 122 (716)
.-+|+|||||++|+-+|..|++.|.+|+|+|+.+..... + .
T Consensus 198 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~----------------~---d-------------------- 238 (491)
T 3urh_A 198 PASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTILGG----------------M---D-------------------- 238 (491)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSSS----------------S---C--------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEecccccccc----------------C---C--------------------
Confidence 357999999999999999999999999999988753210 0 0
Q ss_pred cCCCCceeeccCCCccccccccCCccccccChHHHHHHHHHHHHhcCceeecccccccccccccccceEEeCcEEEEEEe
Q 005056 123 SVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSA 202 (716)
Q Consensus 123 ~~~g~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~l~~~~~~~~~v~~g~~v~~i~~ 202 (716)
..+...+.+.+++.|+ ++++++++++++.
T Consensus 239 --------------------------------~~~~~~l~~~l~~~gV-------------------~v~~~~~v~~i~~ 267 (491)
T 3urh_A 239 --------------------------------GEVAKQLQRMLTKQGI-------------------DFKLGAKVTGAVK 267 (491)
T ss_dssp --------------------------------HHHHHHHHHHHHHTTC-------------------EEECSEEEEEEEE
T ss_pred --------------------------------HHHHHHHHHHHHhCCC-------------------EEEECCeEEEEEE
Confidence 1123344555666676 9999999999999
Q ss_pred cCCeEEEEEEeccCCceeeEEEEecEEEecCCCC
Q 005056 203 TDQCINVIASFLKEGKCTERNIQCNILIGTDGAG 236 (716)
Q Consensus 203 ~~~gv~v~v~~~~~g~~~~~~i~ad~VVgADG~~ 236 (716)
+++++.+++.+.++|+ ..++.+|.||.|-|..
T Consensus 268 ~~~~~~v~~~~~~~g~--~~~i~~D~Vi~a~G~~ 299 (491)
T 3urh_A 268 SGDGAKVTFEPVKGGE--ATTLDAEVVLIATGRK 299 (491)
T ss_dssp ETTEEEEEEEETTSCC--CEEEEESEEEECCCCE
T ss_pred eCCEEEEEEEecCCCc--eEEEEcCEEEEeeCCc
Confidence 8888888776433343 3478999999999965
No 337
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=89.88 E-value=0.22 Score=54.71 Aligned_cols=35 Identities=23% Similarity=0.100 Sum_probs=32.3
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCC
Q 005056 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (716)
Q Consensus 43 ~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~ 77 (716)
.-+|+|||||++|+=+|..|++.|.+|+|+++++.
T Consensus 197 ~k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~~ 231 (464)
T 2xve_A 197 DKTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRTA 231 (464)
T ss_dssp TSEEEEECCSTTHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CCEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECCC
Confidence 35799999999999999999999999999998865
No 338
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=89.83 E-value=0.24 Score=54.60 Aligned_cols=34 Identities=29% Similarity=0.539 Sum_probs=31.6
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCC
Q 005056 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (716)
Q Consensus 43 ~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~ 76 (716)
..+|.|||+|-+|+.+|..|++.|++|+++++++
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~ 41 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQ 41 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CceEEEECcCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 3689999999999999999999999999999875
No 339
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=89.78 E-value=0.2 Score=53.14 Aligned_cols=35 Identities=23% Similarity=0.344 Sum_probs=32.2
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCC
Q 005056 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (716)
Q Consensus 43 ~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~ 77 (716)
...|+|||+|.+|+.+|..|...|.+|+++|+++.
T Consensus 184 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~ 218 (381)
T 3p2y_A 184 PASALVLGVGVAGLQALATAKRLGAKTTGYDVRPE 218 (381)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSGG
T ss_pred CCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 36899999999999999999999999999998863
No 340
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=89.61 E-value=0.27 Score=50.57 Aligned_cols=33 Identities=24% Similarity=0.250 Sum_probs=31.0
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEECCCC
Q 005056 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~ 76 (716)
.+|.|||.|-.|..+|..|++.|++|++++|++
T Consensus 8 ~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 40 (303)
T 3g0o_A 8 FHVGIVGLGSMGMGAARSCLRAGLSTWGADLNP 40 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 579999999999999999999999999999875
No 341
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=89.61 E-value=0.1 Score=57.38 Aligned_cols=34 Identities=26% Similarity=0.426 Sum_probs=31.8
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCC
Q 005056 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~ 77 (716)
+.|+|+|+|-+|..+|-.|...|++|+|||+++.
T Consensus 4 M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~~ 37 (461)
T 4g65_A 4 MKIIILGAGQVGGTLAENLVGENNDITIVDKDGD 37 (461)
T ss_dssp EEEEEECCSHHHHHHHHHTCSTTEEEEEEESCHH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 4699999999999999999999999999999864
No 342
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=89.57 E-value=0.43 Score=49.18 Aligned_cols=34 Identities=21% Similarity=0.491 Sum_probs=31.6
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCC
Q 005056 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (716)
Q Consensus 43 ~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~ 76 (716)
..+|.|||.|-.|..+|..|++.|++|++++|++
T Consensus 9 ~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 42 (306)
T 3l6d_A 9 EFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSP 42 (306)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3589999999999999999999999999999875
No 343
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=89.54 E-value=0.26 Score=51.24 Aligned_cols=34 Identities=21% Similarity=0.390 Sum_probs=30.2
Q ss_pred ccCCEEEECCCHHHHHHHHHHHhCCC--CEEEECCC
Q 005056 42 AVVPVLIVGAGPVGLVLSILLTKLGI--KCSVLEKN 75 (716)
Q Consensus 42 ~~~dVlIVGaGpaGLt~Al~Lar~Gi--~v~liEr~ 75 (716)
...+|.|||+|-+|.++|..|+..|+ .+.|+|.+
T Consensus 5 ~~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~ 40 (317)
T 3d0o_A 5 KGNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLD 40 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 34689999999999999999999986 79999975
No 344
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=89.48 E-value=0.19 Score=51.80 Aligned_cols=31 Identities=23% Similarity=0.441 Sum_probs=29.1
Q ss_pred CCEEEECCCHHHHHHHHHHHhC-----C-CCEEEECC
Q 005056 44 VPVLIVGAGPVGLVLSILLTKL-----G-IKCSVLEK 74 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar~-----G-i~v~liEr 74 (716)
.+|.|||+|..|.++|..|++. | .+|++++|
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc
Confidence 4799999999999999999999 9 99999987
No 345
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=89.43 E-value=0.47 Score=52.84 Aligned_cols=36 Identities=14% Similarity=0.336 Sum_probs=33.4
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCCC
Q 005056 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFS 79 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~~ 79 (716)
-.|+|||||.+|+-+|..|++.|.+|+|+|+.+...
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l 250 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLK 250 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTT
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCccc
Confidence 689999999999999999999999999999988653
No 346
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=89.41 E-value=0.28 Score=53.44 Aligned_cols=36 Identities=19% Similarity=0.002 Sum_probs=32.7
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCC-EEEECCCCCC
Q 005056 43 VVPVLIVGAGPVGLVLSILLTKLGIK-CSVLEKNKAF 78 (716)
Q Consensus 43 ~~dVlIVGaGpaGLt~Al~Lar~Gi~-v~liEr~~~~ 78 (716)
.-+|+|||||++|+=+|..|++.|.+ |+|++|.+..
T Consensus 212 ~k~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~r~~~~ 248 (447)
T 2gv8_A 212 GESVLVVGGASSANDLVRHLTPVAKHPIYQSLLGGGD 248 (447)
T ss_dssp TCCEEEECSSHHHHHHHHHHTTTSCSSEEEECTTCCS
T ss_pred CCEEEEEccCcCHHHHHHHHHHHhCCcEEEEeCCCCc
Confidence 35799999999999999999999999 9999998654
No 347
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=89.28 E-value=0.27 Score=51.06 Aligned_cols=34 Identities=24% Similarity=0.415 Sum_probs=31.5
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCC
Q 005056 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~ 77 (716)
.+|.|||.|-.|..+|..|++.|++|++++|++.
T Consensus 32 ~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 65 (320)
T 4dll_A 32 RKITFLGTGSMGLPMARRLCEAGYALQVWNRTPA 65 (320)
T ss_dssp SEEEEECCTTTHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CEEEEECccHHHHHHHHHHHhCCCeEEEEcCCHH
Confidence 5799999999999999999999999999998753
No 348
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=89.16 E-value=0.12 Score=46.88 Aligned_cols=33 Identities=21% Similarity=0.289 Sum_probs=30.6
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEECCCC
Q 005056 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~ 76 (716)
..|+|||+|..|..+|..|.+.|+++++++|++
T Consensus 22 ~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~ 54 (144)
T 3oj0_A 22 NKILLVGNGMLASEIAPYFSYPQYKVTVAGRNI 54 (144)
T ss_dssp CEEEEECCSHHHHHHGGGCCTTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 579999999999999999999999999999875
No 349
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=89.14 E-value=0.2 Score=50.77 Aligned_cols=34 Identities=26% Similarity=0.404 Sum_probs=31.1
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCC
Q 005056 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (716)
Q Consensus 43 ~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~ 76 (716)
...|||||||.+|+..+..|.+.|.+|+||+...
T Consensus 13 ~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 13 DKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp TCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred CCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 4679999999999999999999999999998654
No 350
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=89.10 E-value=0.32 Score=53.02 Aligned_cols=36 Identities=25% Similarity=0.457 Sum_probs=33.4
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCC
Q 005056 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (716)
Q Consensus 43 ~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~ 78 (716)
.+.+.|||.|-.|+.+|..|++.|++|+++++++..
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~k 43 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDARK 43 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTT
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence 478999999999999999999999999999998764
No 351
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=88.98 E-value=0.31 Score=52.05 Aligned_cols=35 Identities=26% Similarity=0.325 Sum_probs=32.0
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCC
Q 005056 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (716)
Q Consensus 43 ~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~ 77 (716)
...|+|+|+|++|+.++..|...|.+|+++|+++.
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~~ 206 (384)
T 1l7d_A 172 PARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAA 206 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 46899999999999999999999999999998764
No 352
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=88.97 E-value=0.32 Score=50.17 Aligned_cols=32 Identities=25% Similarity=0.398 Sum_probs=29.9
Q ss_pred CEEEECCCHHHHHHHHHHHhCCC--CEEEECCCC
Q 005056 45 PVLIVGAGPVGLVLSILLTKLGI--KCSVLEKNK 76 (716)
Q Consensus 45 dVlIVGaGpaGLt~Al~Lar~Gi--~v~liEr~~ 76 (716)
+|.|||+|-+|.++|..|+..|+ +++++|++.
T Consensus 2 kI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDE 35 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 69999999999999999999999 999999864
No 353
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=88.88 E-value=0.33 Score=50.18 Aligned_cols=34 Identities=29% Similarity=0.432 Sum_probs=31.7
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCC
Q 005056 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~ 77 (716)
.+|.|||.|-.|..+|..|++.|++|++++|++.
T Consensus 22 ~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 55 (310)
T 3doj_A 22 MEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTLS 55 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred CEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 4799999999999999999999999999998764
No 354
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=88.88 E-value=0.32 Score=53.46 Aligned_cols=34 Identities=21% Similarity=0.367 Sum_probs=32.3
Q ss_pred CCEEEECCCHHHHHHHHHHHhC-CC-CEEEECCCCC
Q 005056 44 VPVLIVGAGPVGLVLSILLTKL-GI-KCSVLEKNKA 77 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar~-Gi-~v~liEr~~~ 77 (716)
.+|.|||+|-.|+.+|..|++. |+ +|+++|+++.
T Consensus 19 mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 19 KKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp CEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 4799999999999999999999 99 9999999976
No 355
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=88.88 E-value=0.36 Score=49.98 Aligned_cols=33 Identities=12% Similarity=0.224 Sum_probs=31.1
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCC-CEEEECCCC
Q 005056 44 VPVLIVGAGPVGLVLSILLTKLGI-KCSVLEKNK 76 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar~Gi-~v~liEr~~ 76 (716)
.+|.|||.|-.|..+|..|++.|+ +|+++++++
T Consensus 25 ~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~~ 58 (312)
T 3qsg_A 25 MKLGFIGFGEAASAIASGLRQAGAIDMAAYDAAS 58 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSSC
T ss_pred CEEEEECccHHHHHHHHHHHHCCCCeEEEEcCCC
Confidence 579999999999999999999999 999999875
No 356
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=88.85 E-value=0.29 Score=52.66 Aligned_cols=35 Identities=23% Similarity=0.358 Sum_probs=31.9
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCC
Q 005056 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (716)
Q Consensus 43 ~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~ 77 (716)
...|+|+|+|.+|+.++..|...|.+|+++|+++.
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~~ 206 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRPE 206 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCGG
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 35799999999999999999999999999998753
No 357
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=88.82 E-value=0.45 Score=50.62 Aligned_cols=36 Identities=25% Similarity=0.426 Sum_probs=32.4
Q ss_pred ccCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCC
Q 005056 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (716)
Q Consensus 42 ~~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~ 77 (716)
....|+|+|+|..|..++..+++.|++|++++..+.
T Consensus 11 ~~~~IlIlG~G~lg~~la~aa~~lG~~viv~d~~~~ 46 (377)
T 3orq_A 11 FGATIGIIGGGQLGKMMAQSAQKMGYKVVVLDPSED 46 (377)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 346799999999999999999999999999997654
No 358
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=88.67 E-value=0.43 Score=48.53 Aligned_cols=33 Identities=21% Similarity=0.295 Sum_probs=30.4
Q ss_pred CCEEEECC-CHHHHHHHHHHHhCCCCEEEECCCC
Q 005056 44 VPVLIVGA-GPVGLVLSILLTKLGIKCSVLEKNK 76 (716)
Q Consensus 44 ~dVlIVGa-GpaGLt~Al~Lar~Gi~v~liEr~~ 76 (716)
..|.|||+ |-.|..+|..|.+.|++|++++|++
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~ 45 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAP 45 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 36999999 9999999999999999999999764
No 359
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=88.65 E-value=0.4 Score=52.85 Aligned_cols=33 Identities=15% Similarity=0.329 Sum_probs=31.1
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEECCCC
Q 005056 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~ 76 (716)
.+|.|||+|..|...|..|++.|++|+++|+++
T Consensus 6 ~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~ 38 (483)
T 3mog_A 6 QTVAVIGSGTMGAGIAEVAASHGHQVLLYDISA 38 (483)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 579999999999999999999999999999875
No 360
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=88.60 E-value=0.38 Score=49.72 Aligned_cols=33 Identities=24% Similarity=0.308 Sum_probs=30.4
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCC-CEEEECCCC
Q 005056 44 VPVLIVGAGPVGLVLSILLTKLGI-KCSVLEKNK 76 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar~Gi-~v~liEr~~ 76 (716)
.+|.|||+|-+|..+|..|+..|+ +++++|.+.
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~ 36 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCc
Confidence 479999999999999999999997 999999874
No 361
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=88.35 E-value=0.32 Score=51.52 Aligned_cols=33 Identities=27% Similarity=0.439 Sum_probs=30.8
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEECCCC
Q 005056 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~ 76 (716)
..|+|+|+|.+|+.++..|+..|.+|+++++++
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~ 200 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGLGAQVQIFDINV 200 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 579999999999999999999999999999864
No 362
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=88.29 E-value=0.48 Score=49.29 Aligned_cols=35 Identities=14% Similarity=0.294 Sum_probs=31.2
Q ss_pred ccCCEEEECCCHHHHHHHHHHHhCCC--CEEEECCCC
Q 005056 42 AVVPVLIVGAGPVGLVLSILLTKLGI--KCSVLEKNK 76 (716)
Q Consensus 42 ~~~dVlIVGaGpaGLt~Al~Lar~Gi--~v~liEr~~ 76 (716)
...+|.|||+|.+|.++|..|+..|+ +++++|.+.
T Consensus 20 ~~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~~ 56 (330)
T 3ldh_A 20 SYNKITVVGCDAVGMADAISVLMKDLADEVALVDVME 56 (330)
T ss_dssp CCCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCH
Confidence 34689999999999999999999998 899999853
No 363
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=88.21 E-value=0.47 Score=50.62 Aligned_cols=37 Identities=24% Similarity=0.452 Sum_probs=32.8
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCC
Q 005056 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (716)
Q Consensus 41 ~~~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~ 77 (716)
+....|+|+|+|..|..++..+.+.|++|++++..+.
T Consensus 12 ~~~k~IlIlG~G~~g~~la~aa~~~G~~vi~~d~~~~ 48 (389)
T 3q2o_A 12 LPGKTIGIIGGGQLGRMMALAAKEMGYKIAVLDPTKN 48 (389)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSTT
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCC
Confidence 3445899999999999999999999999999997754
No 364
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=88.15 E-value=0.43 Score=53.75 Aligned_cols=57 Identities=12% Similarity=0.328 Sum_probs=41.6
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCCCCCCC-eeeeChhHHHHHHhhhch
Q 005056 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQ-AHFINNRYALVFRKLDGL 101 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~~~~p~-a~~i~~rtmeilr~l~Gl 101 (716)
-.|+|||+|..|..+|..|.+.|++|+++|+++.....-. ...-++...++|++. |+
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~i~gD~t~~~~L~~a-gi 406 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKPVPFILIDRQESPVCNDHVVVYGDATVGQTLRQA-GI 406 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCSSCCSSCEEESCSSSSTHHHHH-TT
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEECChHHHhhcCCEEEeCCCCHHHHHhc-Cc
Confidence 6899999999999999999999999999999987633221 222223333455555 44
No 365
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=88.03 E-value=6.8 Score=44.80 Aligned_cols=51 Identities=22% Similarity=0.228 Sum_probs=37.4
Q ss_pred ccccceEEeCcEEEEEEecCCeEEEEEEeccCCceeeEEEEecEEEecCCCC
Q 005056 185 LLQGREILMGHECVSVSATDQCINVIASFLKEGKCTERNIQCNILIGTDGAG 236 (716)
Q Consensus 185 ~~~~~~v~~g~~v~~i~~~~~gv~v~v~~~~~g~~~~~~i~ad~VVgADG~~ 236 (716)
+....+|+++++|++|++++++|+|++.+..++. ...+++||+||.|=...
T Consensus 407 La~~l~I~l~~~V~~I~~~~~~v~V~~~~~~~~~-~~~~~~Ad~VI~tvP~~ 457 (662)
T 2z3y_A 407 LAEGLDIKLNTAVRQVRYTASGCEVIAVNTRSTS-QTFIYKCDAVLCTLPLG 457 (662)
T ss_dssp HTTTCEEETTEEEEEEEEETTEEEEEEEESSCTT-CEEEEEESEEEECCCHH
T ss_pred HHhcCceecCCeEEEEEECCCcEEEEEeecccCC-CCeEEEeCEEEECCCHH
Confidence 3344589999999999999999988876321111 12479999999997743
No 366
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=88.01 E-value=0.63 Score=47.71 Aligned_cols=34 Identities=26% Similarity=0.438 Sum_probs=31.2
Q ss_pred CCEEEEC-CCHHHHHHHHHHHhCCCCEEEECCCCC
Q 005056 44 VPVLIVG-AGPVGLVLSILLTKLGIKCSVLEKNKA 77 (716)
Q Consensus 44 ~dVlIVG-aGpaGLt~Al~Lar~Gi~v~liEr~~~ 77 (716)
..|.||| +|-.|.++|..|++.|++|+++++++.
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~ 56 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRASGYPISILDREDW 56 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCG
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCcc
Confidence 3699999 999999999999999999999998753
No 367
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=88.01 E-value=0.39 Score=49.57 Aligned_cols=32 Identities=28% Similarity=0.529 Sum_probs=29.7
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEECCCC
Q 005056 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~ 76 (716)
.+|+|||+|-.|.++|..|+ .|.+|+++.|.+
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~ 34 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQ 34 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHh-cCCceEEEECCH
Confidence 47999999999999999999 999999999864
No 368
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=87.99 E-value=0.36 Score=50.30 Aligned_cols=34 Identities=18% Similarity=0.220 Sum_probs=31.0
Q ss_pred CCEEEECCCHHHHH-HHHHHHhCCCCEEEECCCCC
Q 005056 44 VPVLIVGAGPVGLV-LSILLTKLGIKCSVLEKNKA 77 (716)
Q Consensus 44 ~dVlIVGaGpaGLt-~Al~Lar~Gi~v~liEr~~~ 77 (716)
..|.|||.|.+|++ +|..|.++|++|.+.|++..
T Consensus 5 ~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~ 39 (326)
T 3eag_A 5 KHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMY 39 (326)
T ss_dssp CEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred cEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCC
Confidence 36999999999996 89999999999999999864
No 369
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=87.92 E-value=0.19 Score=49.55 Aligned_cols=34 Identities=18% Similarity=0.069 Sum_probs=30.7
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCC
Q 005056 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (716)
Q Consensus 43 ~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~ 77 (716)
+..|+|+|+|.+|..+|..|.+.|+ |+++|+++.
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~~ 42 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRGSEV-FVLAEDENV 42 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGGG
T ss_pred CCEEEEECCChHHHHHHHHHHhCCe-EEEEECCHH
Confidence 4579999999999999999999999 999999864
No 370
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=87.68 E-value=0.43 Score=50.41 Aligned_cols=35 Identities=26% Similarity=0.398 Sum_probs=31.7
Q ss_pred ccCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCC
Q 005056 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (716)
Q Consensus 42 ~~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~ 76 (716)
...+|.|||.|-.|..+|..|++.|++|++++|++
T Consensus 21 ~~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~ 55 (358)
T 4e21_A 21 QSMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNV 55 (358)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 34689999999999999999999999999999875
No 371
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=87.60 E-value=0.46 Score=49.08 Aligned_cols=33 Identities=21% Similarity=0.368 Sum_probs=29.9
Q ss_pred CEEEECCCHHHHHHHHHHHhC--CCCEEEECCCCC
Q 005056 45 PVLIVGAGPVGLVLSILLTKL--GIKCSVLEKNKA 77 (716)
Q Consensus 45 dVlIVGaGpaGLt~Al~Lar~--Gi~v~liEr~~~ 77 (716)
+|.|||+|-+|.++|..|++. |.+|+++|+++.
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~~ 36 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVVEG 36 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChh
Confidence 689999999999999999985 789999999753
No 372
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=87.54 E-value=0.52 Score=48.78 Aligned_cols=34 Identities=32% Similarity=0.373 Sum_probs=31.1
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCC--CEEEECCCC
Q 005056 43 VVPVLIVGAGPVGLVLSILLTKLGI--KCSVLEKNK 76 (716)
Q Consensus 43 ~~dVlIVGaGpaGLt~Al~Lar~Gi--~v~liEr~~ 76 (716)
..+|.|||.|..|.++|..|.+.|+ +|+++++++
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~ 68 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 68 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCH
Confidence 3579999999999999999999999 899999875
No 373
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=87.31 E-value=0.36 Score=52.21 Aligned_cols=33 Identities=27% Similarity=0.442 Sum_probs=30.4
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCC
Q 005056 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~ 77 (716)
.+|.|||+|-.|+.+|..|++ |++|+++|+++.
T Consensus 37 mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~~ 69 (432)
T 3pid_A 37 MKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQA 69 (432)
T ss_dssp CEEEEECCSHHHHHHHHHHHT-TSEEEEECSCHH
T ss_pred CEEEEECcCHHHHHHHHHHHc-CCeEEEEecCHH
Confidence 479999999999999999998 999999998753
No 374
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=87.27 E-value=0.17 Score=49.87 Aligned_cols=32 Identities=22% Similarity=0.236 Sum_probs=30.0
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEECC
Q 005056 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEK 74 (716)
Q Consensus 43 ~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr 74 (716)
..+|.|||+|..|.++|..|++.|++|+++++
T Consensus 6 ~mkI~IIG~G~~G~sLA~~L~~~G~~V~~~~~ 37 (232)
T 3dfu_A 6 RLRVGIFDDGSSTVNMAEKLDSVGHYVTVLHA 37 (232)
T ss_dssp CCEEEEECCSCCCSCHHHHHHHTTCEEEECSS
T ss_pred CcEEEEEeeCHHHHHHHHHHHHCCCEEEEecC
Confidence 35799999999999999999999999999998
No 375
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=87.25 E-value=0.57 Score=51.07 Aligned_cols=34 Identities=26% Similarity=0.483 Sum_probs=32.1
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCC
Q 005056 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~ 77 (716)
..|.|||+|..|...|..|++.|++|+++|+++.
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~e 88 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQ 88 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECcHH
Confidence 4799999999999999999999999999999875
No 376
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=87.21 E-value=0.38 Score=52.31 Aligned_cols=32 Identities=25% Similarity=0.273 Sum_probs=30.2
Q ss_pred CEEEECCCHHHHHHHHHHHhCCCCEEEECCCC
Q 005056 45 PVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (716)
Q Consensus 45 dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~ 76 (716)
+|.|||+|-+|+.+|..|++.|++|+++++++
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~ 33 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARGHEVIGVDVSS 33 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 58999999999999999999999999999875
No 377
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=87.04 E-value=0.47 Score=49.17 Aligned_cols=32 Identities=28% Similarity=0.466 Sum_probs=29.5
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEECCCC
Q 005056 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~ 76 (716)
.+|.|||+|-.|.++|..|++.|.+|+++ +++
T Consensus 20 ~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~~ 51 (318)
T 3hwr_A 20 MKVAIMGAGAVGCYYGGMLARAGHEVILI-ARP 51 (318)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CCH
T ss_pred CcEEEECcCHHHHHHHHHHHHCCCeEEEE-EcH
Confidence 57999999999999999999999999999 653
No 378
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=86.99 E-value=0.55 Score=51.35 Aligned_cols=36 Identities=14% Similarity=0.163 Sum_probs=32.1
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCC-EEEECCCCCC
Q 005056 43 VVPVLIVGAGPVGLVLSILLTKLGIK-CSVLEKNKAF 78 (716)
Q Consensus 43 ~~dVlIVGaGpaGLt~Al~Lar~Gi~-v~liEr~~~~ 78 (716)
.-+|+|||||.+|+-+|..|.+.|.+ |+|++|++..
T Consensus 264 gk~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~~~ 300 (456)
T 2vdc_G 264 GKHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRDRK 300 (456)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCST
T ss_pred CCEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCCcc
Confidence 35799999999999999999999985 9999988754
No 379
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=86.89 E-value=0.57 Score=51.34 Aligned_cols=34 Identities=24% Similarity=0.467 Sum_probs=31.3
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCC
Q 005056 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~ 77 (716)
..|.|||+|..|...|..|++.|++|+++|+++.
T Consensus 38 ~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~~ 71 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAISFARVGISVVAVESDPK 71 (463)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHH
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 3699999999999999999999999999998753
No 380
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=86.82 E-value=0.44 Score=48.69 Aligned_cols=33 Identities=30% Similarity=0.363 Sum_probs=30.5
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEECCCC
Q 005056 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~ 76 (716)
.+|.|||+|..|..+|..|.+.|++|.++++++
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 38 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNP 38 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 479999999999999999999999999999864
No 381
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=86.72 E-value=2 Score=45.89 Aligned_cols=36 Identities=22% Similarity=0.143 Sum_probs=26.8
Q ss_pred CeEEEEccCCccCCCCCCccchhhHhHHHHHHHHHHHHH
Q 005056 359 NQIILAGDACHRFPPAGGFGMNTGVQDAHNLAWKIASVL 397 (716)
Q Consensus 359 gRV~LvGDAAH~~~P~gG~G~n~gi~DA~~LawkLa~vl 397 (716)
.+||.+||+++.-.|.. ...+...+..+|..|...+
T Consensus 300 ~~vfa~GD~~~~~~~~~---~~~A~~q~~~aa~~i~~~l 335 (409)
T 3h8l_A 300 DNVYAVGDANSMTVPKL---GYLAVMTGRIAAQHLANRL 335 (409)
T ss_dssp TTEEECGGGBTTCCSCC---HHHHHHHHHHHHHHHHHHT
T ss_pred CCEEEeehhccCCCCcH---HHHHHHHHHHHHHHHHHHh
Confidence 68999999998633322 3467888888888887776
No 382
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=86.68 E-value=0.5 Score=48.27 Aligned_cols=38 Identities=37% Similarity=0.512 Sum_probs=33.3
Q ss_pred CCCccCCEEEECCCHHHHHHHHHHHhCCC-CEEEECCCC
Q 005056 39 SNEAVVPVLIVGAGPVGLVLSILLTKLGI-KCSVLEKNK 76 (716)
Q Consensus 39 ~~~~~~dVlIVGaGpaGLt~Al~Lar~Gi-~v~liEr~~ 76 (716)
..-....|+|||+|-.|..+|..|++.|+ +++|+|.+.
T Consensus 32 ~kL~~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~ 70 (292)
T 3h8v_A 32 EKIRTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDK 70 (292)
T ss_dssp CGGGGCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred HHHhCCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCc
Confidence 33456899999999999999999999998 788999775
No 383
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=86.64 E-value=0.54 Score=49.05 Aligned_cols=35 Identities=23% Similarity=0.417 Sum_probs=31.5
Q ss_pred ccCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCC
Q 005056 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (716)
Q Consensus 42 ~~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~ 76 (716)
+..+|.|||+|-.|.++|..|++.|.+|++++|++
T Consensus 13 ~~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~~ 47 (335)
T 1z82_A 13 MEMRFFVLGAGSWGTVFAQMLHENGEEVILWARRK 47 (335)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred cCCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 34789999999999999999999999999999864
No 384
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=86.58 E-value=0.61 Score=46.56 Aligned_cols=35 Identities=14% Similarity=0.138 Sum_probs=31.7
Q ss_pred CCEEEECCCHHHHHHHHHHHhCC----CCEEEECCCCCC
Q 005056 44 VPVLIVGAGPVGLVLSILLTKLG----IKCSVLEKNKAF 78 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar~G----i~v~liEr~~~~ 78 (716)
.+|.|||+|-.|.++|..|++.| .+|.+++|++..
T Consensus 5 m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~~ 43 (262)
T 2rcy_A 5 IKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSKKN 43 (262)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSCCS
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCccc
Confidence 47999999999999999999999 699999998754
No 385
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=86.56 E-value=0.5 Score=48.05 Aligned_cols=34 Identities=18% Similarity=0.310 Sum_probs=31.5
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCC
Q 005056 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~ 77 (716)
.+|.|||.|-.|..+|..|++.|++|++++|++.
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPE 35 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 3699999999999999999999999999998864
No 386
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=86.54 E-value=0.49 Score=50.19 Aligned_cols=33 Identities=27% Similarity=0.535 Sum_probs=30.7
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEECCCC
Q 005056 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~ 76 (716)
..|+|+|+|.+|+.+|..|+..|.+|+++++++
T Consensus 167 ~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~ 199 (369)
T 2eez_A 167 ASVVILGGGTVGTNAAKIALGMGAQVTILDVNH 199 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 579999999999999999999999999998764
No 387
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=86.48 E-value=0.7 Score=46.65 Aligned_cols=35 Identities=31% Similarity=0.434 Sum_probs=32.0
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCC
Q 005056 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~ 78 (716)
..|+|.|+|-.|..++..|.++|++|+++.|+...
T Consensus 4 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~~ 38 (286)
T 3gpi_A 4 SKILIAGCGDLGLELARRLTAQGHEVTGLRRSAQP 38 (286)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEECTTSC
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCccc
Confidence 47999999999999999999999999999998653
No 388
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=86.43 E-value=0.54 Score=51.76 Aligned_cols=98 Identities=22% Similarity=0.448 Sum_probs=75.0
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCCCCCCCeeeeChhHHHHHHhhhchHHHHHhcCCCccccceeEEee
Q 005056 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCT 122 (716)
Q Consensus 43 ~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~~~~p~a~~i~~rtmeilr~l~Gl~~~l~~~~~~~~~~~~~~~~~ 122 (716)
..+|+|||+|++|+-+|..|++.|.+|+++++.+.... .+ .
T Consensus 191 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~----------------~~---~-------------------- 231 (484)
T 3o0h_A 191 PKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGDLILR----------------NF---D-------------------- 231 (484)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST----------------TS---C--------------------
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCCeEEEEECCCcccc----------------cc---C--------------------
Confidence 45899999999999999999999999999999864310 00 0
Q ss_pred cCCCCceeeccCCCccccccccCCccccccChHHHHHHHHHHHHhcCceeecccccccccccccccceEEeCcEEEEEEe
Q 005056 123 SVTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSA 202 (716)
Q Consensus 123 ~~~g~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~l~~~~~~~~~v~~g~~v~~i~~ 202 (716)
..+...|.+.+++.|+ +++++++|++++.
T Consensus 232 --------------------------------~~~~~~l~~~l~~~Gv-------------------~i~~~~~V~~i~~ 260 (484)
T 3o0h_A 232 --------------------------------YDLRQLLNDAMVAKGI-------------------SIIYEATVSQVQS 260 (484)
T ss_dssp --------------------------------HHHHHHHHHHHHHHTC-------------------EEESSCCEEEEEE
T ss_pred --------------------------------HHHHHHHHHHHHHCCC-------------------EEEeCCEEEEEEe
Confidence 1123345556666777 9999999999998
Q ss_pred cCCeEEEEEEeccCCceeeEEEEecEEEecCCCCh
Q 005056 203 TDQCINVIASFLKEGKCTERNIQCNILIGTDGAGS 237 (716)
Q Consensus 203 ~~~gv~v~v~~~~~g~~~~~~i~ad~VVgADG~~S 237 (716)
+++++.+++. +|+ ++.+|.||.|.|..+
T Consensus 261 ~~~~v~v~~~---~g~----~i~aD~Vi~A~G~~p 288 (484)
T 3o0h_A 261 TENCYNVVLT---NGQ----TICADRVMLATGRVP 288 (484)
T ss_dssp CSSSEEEEET---TSC----EEEESEEEECCCEEE
T ss_pred eCCEEEEEEC---CCc----EEEcCEEEEeeCCCc
Confidence 8888766553 453 689999999999654
No 389
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=86.30 E-value=0.68 Score=44.96 Aligned_cols=33 Identities=30% Similarity=0.319 Sum_probs=30.6
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEECCCC
Q 005056 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~ 76 (716)
..|.|||+|-.|..+|..|++.|++|++++|++
T Consensus 29 ~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~ 61 (215)
T 2vns_A 29 PKVGILGSGDFARSLATRLVGSGFKVVVGSRNP 61 (215)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSH
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 479999999999999999999999999999864
No 390
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=86.29 E-value=0.62 Score=50.49 Aligned_cols=33 Identities=24% Similarity=0.391 Sum_probs=31.0
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEECCCC
Q 005056 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~ 76 (716)
..|.|||.|-+||.+|..|++.|++|+.+|.++
T Consensus 22 ~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~ 54 (444)
T 3vtf_A 22 ASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNP 54 (444)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEECSCH
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 579999999999999999999999999999775
No 391
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=86.29 E-value=0.61 Score=48.34 Aligned_cols=33 Identities=30% Similarity=0.538 Sum_probs=29.6
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCC--CEEEECCCC
Q 005056 44 VPVLIVGAGPVGLVLSILLTKLGI--KCSVLEKNK 76 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar~Gi--~v~liEr~~ 76 (716)
.+|.|||+|.+|.++|+.|+..|+ +++++|.+.
T Consensus 7 ~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~ 41 (316)
T 1ldn_A 7 ARVVVIGAGFVGASYVFALMNQGIADEIVLIDANE 41 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCc
Confidence 589999999999999999999886 799999763
No 392
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=86.21 E-value=0.56 Score=48.81 Aligned_cols=34 Identities=24% Similarity=0.392 Sum_probs=30.5
Q ss_pred ccCCEEEECCCHHHHHHHHHHHhCCC--CEEEECCC
Q 005056 42 AVVPVLIVGAGPVGLVLSILLTKLGI--KCSVLEKN 75 (716)
Q Consensus 42 ~~~dVlIVGaGpaGLt~Al~Lar~Gi--~v~liEr~ 75 (716)
...+|.|||+|.+|.++|..|+..|+ +++|+|.+
T Consensus 8 ~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~ 43 (326)
T 3vku_A 8 DHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIF 43 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCC
Confidence 34689999999999999999999998 89999975
No 393
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=86.04 E-value=0.53 Score=48.22 Aligned_cols=32 Identities=19% Similarity=0.134 Sum_probs=29.7
Q ss_pred CEEEECCCHHHHHHHHHHHhCCC--CEEEECCCC
Q 005056 45 PVLIVGAGPVGLVLSILLTKLGI--KCSVLEKNK 76 (716)
Q Consensus 45 dVlIVGaGpaGLt~Al~Lar~Gi--~v~liEr~~ 76 (716)
+|.|||+|.+|.++|..|+..|+ +++|+|+++
T Consensus 2 kI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~ 35 (294)
T 1oju_A 2 KLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAE 35 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCh
Confidence 69999999999999999999998 899999865
No 394
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=86.00 E-value=0.84 Score=47.79 Aligned_cols=35 Identities=17% Similarity=0.247 Sum_probs=30.4
Q ss_pred ccCCEEEECC-CHHHHHHHHHHHhCCC--CEEEECCCC
Q 005056 42 AVVPVLIVGA-GPVGLVLSILLTKLGI--KCSVLEKNK 76 (716)
Q Consensus 42 ~~~dVlIVGa-GpaGLt~Al~Lar~Gi--~v~liEr~~ 76 (716)
...+|.|||+ |-+|.++|..|...|+ +++|+|.+.
T Consensus 7 ~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~ 44 (343)
T 3fi9_A 7 TEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFA 44 (343)
T ss_dssp CSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCH
T ss_pred CCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCc
Confidence 3467999998 9999999999999996 899999753
No 395
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=85.96 E-value=0.7 Score=46.31 Aligned_cols=33 Identities=24% Similarity=0.555 Sum_probs=30.3
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCC-EEEECCCC
Q 005056 44 VPVLIVGAGPVGLVLSILLTKLGIK-CSVLEKNK 76 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar~Gi~-v~liEr~~ 76 (716)
..|.|||+|-.|..+|..|++.|++ |.+++|++
T Consensus 11 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~ 44 (266)
T 3d1l_A 11 TPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTE 44 (266)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSH
T ss_pred CeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCH
Confidence 5799999999999999999999999 89999764
No 396
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=85.95 E-value=0.65 Score=51.11 Aligned_cols=36 Identities=17% Similarity=0.328 Sum_probs=31.9
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCC
Q 005056 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (716)
Q Consensus 41 ~~~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~ 76 (716)
|.+.+|.|||+|-.|..+|..|+++|++|++++|++
T Consensus 13 ~~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~ 48 (480)
T 2zyd_A 13 MSKQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSR 48 (480)
T ss_dssp --CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred cCCCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 456789999999999999999999999999999874
No 397
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=85.95 E-value=0.6 Score=46.36 Aligned_cols=36 Identities=19% Similarity=0.398 Sum_probs=32.3
Q ss_pred ccCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCC
Q 005056 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (716)
Q Consensus 42 ~~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~ 77 (716)
....|.|||+|-.|.++|..|++.|++|++++|++.
T Consensus 18 ~~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~~ 53 (245)
T 3dtt_A 18 QGMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDPK 53 (245)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCChh
Confidence 346799999999999999999999999999998764
No 398
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=85.82 E-value=0.57 Score=48.22 Aligned_cols=33 Identities=21% Similarity=0.533 Sum_probs=29.9
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCC--CEEEECCCC
Q 005056 44 VPVLIVGAGPVGLVLSILLTKLGI--KCSVLEKNK 76 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar~Gi--~v~liEr~~ 76 (716)
.+|.|||||-+|..+|+.|+..|+ +++|+|.+.
T Consensus 15 ~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~ 49 (303)
T 2i6t_A 15 NKITVVGGGELGIACTLAISAKGIADRLVLLDLSE 49 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCc
Confidence 579999999999999999999998 999999875
No 399
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=85.80 E-value=0.6 Score=48.31 Aligned_cols=33 Identities=18% Similarity=0.431 Sum_probs=30.3
Q ss_pred CEEEECCCHHHHHHHHHHHhCCC--CEEEECCCCC
Q 005056 45 PVLIVGAGPVGLVLSILLTKLGI--KCSVLEKNKA 77 (716)
Q Consensus 45 dVlIVGaGpaGLt~Al~Lar~Gi--~v~liEr~~~ 77 (716)
+|.|||+|.+|.++|..|+..|+ +++|+|..+.
T Consensus 2 kv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~ 36 (314)
T 3nep_X 2 KVTVIGAGNVGATVAECVARQDVAKEVVMVDIKDG 36 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCSSEEEEECSSTT
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCchH
Confidence 58999999999999999999998 8999998763
No 400
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=85.72 E-value=0.71 Score=47.91 Aligned_cols=34 Identities=24% Similarity=0.292 Sum_probs=30.9
Q ss_pred CCEEEECCCHHHHHHHHHHHhCC----CCEEEECCCCC
Q 005056 44 VPVLIVGAGPVGLVLSILLTKLG----IKCSVLEKNKA 77 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar~G----i~v~liEr~~~ 77 (716)
.+|.|||+|-.|.++|..|.+.| .+|++++|++.
T Consensus 23 mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~~ 60 (322)
T 2izz_A 23 MSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDMD 60 (322)
T ss_dssp CCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCTT
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCcc
Confidence 47999999999999999999999 79999998753
No 401
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=85.72 E-value=0.82 Score=47.87 Aligned_cols=33 Identities=24% Similarity=0.247 Sum_probs=30.9
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEECCCC
Q 005056 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~ 76 (716)
.+|.|||.|..|.++|..|.+.|++|+++++++
T Consensus 9 ~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~ 41 (341)
T 3ktd_A 9 RPVCILGLGLIGGSLLRDLHAANHSVFGYNRSR 41 (341)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 479999999999999999999999999999875
No 402
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=85.71 E-value=0.55 Score=51.68 Aligned_cols=100 Identities=22% Similarity=0.290 Sum_probs=72.4
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCCCCCCCeeeeChhHHHHHHhhhchHHHHHhcCCCccccceeEEeec
Q 005056 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAFSTHPQAHFINNRYALVFRKLDGLAEEIERSQPPVDLWRKFIYCTS 123 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~~~~p~a~~i~~rtmeilr~l~Gl~~~l~~~~~~~~~~~~~~~~~~ 123 (716)
-+|+|||||++|+-+|..|++.|.+|+|+++..... .+.
T Consensus 188 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~l~--------------------~~d--------------------- 226 (483)
T 3dgh_A 188 GKTLVVGAGYIGLECAGFLKGLGYEPTVMVRSIVLR--------------------GFD--------------------- 226 (483)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCSST--------------------TSC---------------------
T ss_pred CcEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCCCc--------------------ccC---------------------
Confidence 479999999999999999999999999999742110 000
Q ss_pred CCCCceeeccCCCccccccccCCccccccChHHHHHHHHHHHHhcCceeecccccccccccccccceEEeCcEEEEEEec
Q 005056 124 VTGPILGSVDHMQPQDFEKVVSPVSVAHFSQYKLNKLLLKQLEKLNFKICTSEGTEGLHNHLLQGREILMGHECVSVSAT 203 (716)
Q Consensus 124 ~~g~~l~~~~~~~~~~~~~~~~p~~~~~i~q~~Le~~L~~~~~~~g~~~~~~~~~~~l~~~~~~~~~v~~g~~v~~i~~~ 203 (716)
..+...+.+.+++.|+ ++++++++++++.+
T Consensus 227 -------------------------------~~~~~~l~~~l~~~Gv-------------------~i~~~~~v~~i~~~ 256 (483)
T 3dgh_A 227 -------------------------------QQMAELVAASMEERGI-------------------PFLRKTVPLSVEKQ 256 (483)
T ss_dssp -------------------------------HHHHHHHHHHHHHTTC-------------------CEEETEEEEEEEEC
T ss_pred -------------------------------HHHHHHHHHHHHhCCC-------------------EEEeCCEEEEEEEc
Confidence 0123345555667776 89999999999886
Q ss_pred CC-eEEEEEEeccCCceeeEEEEecEEEecCCCC
Q 005056 204 DQ-CINVIASFLKEGKCTERNIQCNILIGTDGAG 236 (716)
Q Consensus 204 ~~-gv~v~v~~~~~g~~~~~~i~ad~VVgADG~~ 236 (716)
++ .+.+++.+..+++ ..++.+|.||.|-|..
T Consensus 257 ~~~~~~v~~~~~~~~~--~~~~~~D~vi~a~G~~ 288 (483)
T 3dgh_A 257 DDGKLLVKYKNVETGE--ESEDVYDTVLWAIGRK 288 (483)
T ss_dssp TTSCEEEEEEETTTCC--EEEEEESEEEECSCEE
T ss_pred CCCcEEEEEecCCCCc--eeEEEcCEEEECcccc
Confidence 55 4666665332232 4578999999999954
No 403
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=85.49 E-value=0.55 Score=48.75 Aligned_cols=30 Identities=33% Similarity=0.463 Sum_probs=28.9
Q ss_pred CEEEECCCHHHHHHHHHHHhCCCCEEEECC
Q 005056 45 PVLIVGAGPVGLVLSILLTKLGIKCSVLEK 74 (716)
Q Consensus 45 dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr 74 (716)
+|.|||+|-.|..+|..|++.|++|++++|
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCCEEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEEc
Confidence 589999999999999999999999999998
No 404
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=85.45 E-value=0.6 Score=49.68 Aligned_cols=34 Identities=26% Similarity=0.468 Sum_probs=31.1
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCC
Q 005056 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (716)
Q Consensus 43 ~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~ 76 (716)
...|+|+|+|.+|+.+|..|+..|.+|+++++++
T Consensus 168 g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~ 201 (377)
T 2vhw_A 168 PADVVVIGAGTAGYNAARIANGMGATVTVLDINI 201 (377)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 4679999999999999999999999999999764
No 405
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=85.32 E-value=0.45 Score=50.27 Aligned_cols=32 Identities=25% Similarity=0.461 Sum_probs=30.1
Q ss_pred CEEEECCCHHHHHHHHHHHhCCCCEEEECCCC
Q 005056 45 PVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (716)
Q Consensus 45 dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~ 76 (716)
+|.|||+|-.|.++|..|++.|++|++++|++
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~ 48 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMNE 48 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSCH
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 69999999999999999999999999999864
No 406
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=85.30 E-value=0.55 Score=47.78 Aligned_cols=33 Identities=24% Similarity=0.364 Sum_probs=31.1
Q ss_pred CEEEECCCHHHHHHHHHHHhCCCCEEEECCCCC
Q 005056 45 PVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (716)
Q Consensus 45 dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~ 77 (716)
+|.|||.|-.|..+|..|++.|++|++++|++.
T Consensus 3 ~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pdu_A 3 TYGFLGLGIMGGPMAANLVRAGFDVTVWNRNPA 35 (287)
T ss_dssp CEEEECCSTTHHHHHHHHHHHTCCEEEECSSGG
T ss_pred eEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 699999999999999999999999999998864
No 407
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=85.19 E-value=0.68 Score=48.02 Aligned_cols=34 Identities=24% Similarity=0.442 Sum_probs=30.2
Q ss_pred ccCCEEEECCCHHHHHHHHHHHhCCC--CEEEECCC
Q 005056 42 AVVPVLIVGAGPVGLVLSILLTKLGI--KCSVLEKN 75 (716)
Q Consensus 42 ~~~dVlIVGaGpaGLt~Al~Lar~Gi--~v~liEr~ 75 (716)
++.+|.|||+|-+|.++|+.|+..++ .+.|+|.+
T Consensus 4 ~~~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~ 39 (318)
T 1ez4_A 4 NHQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVV 39 (318)
T ss_dssp TBCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCC
Confidence 34789999999999999999999887 79999974
No 408
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=85.13 E-value=0.42 Score=49.59 Aligned_cols=34 Identities=9% Similarity=0.085 Sum_probs=31.7
Q ss_pred CCEEEECCCHHHHHHHHHHHhCC-CCEEEECCCCC
Q 005056 44 VPVLIVGAGPVGLVLSILLTKLG-IKCSVLEKNKA 77 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar~G-i~v~liEr~~~ 77 (716)
.+|.|||.|-.|..+|..|++.| ++|+++++++.
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~~ 59 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRFN 59 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGGG
T ss_pred CeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCCc
Confidence 47999999999999999999999 99999999864
No 409
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=85.09 E-value=0.63 Score=47.53 Aligned_cols=33 Identities=21% Similarity=0.400 Sum_probs=30.6
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEECCCC
Q 005056 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~ 76 (716)
..|.|||+|-.|...|..|.+.|++|+++++++
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 37 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLKEGVTVYAFDLME 37 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 579999999999999999999999999999864
No 410
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=85.02 E-value=0.87 Score=50.04 Aligned_cols=34 Identities=12% Similarity=0.307 Sum_probs=31.7
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCC
Q 005056 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~ 77 (716)
.+|.|||.|-.|..+|..|+++|++|++++|++.
T Consensus 5 ~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~~ 38 (484)
T 4gwg_A 5 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVS 38 (484)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTH
T ss_pred CEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 5799999999999999999999999999998763
No 411
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=85.01 E-value=0.59 Score=51.08 Aligned_cols=34 Identities=24% Similarity=0.267 Sum_probs=30.9
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCC
Q 005056 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (716)
Q Consensus 43 ~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~ 76 (716)
...|+|+|+|.+|..+|..|+..|.+|+++|+++
T Consensus 265 GKtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~ 298 (488)
T 3ond_A 265 GKVAVVAGYGDVGKGCAAALKQAGARVIVTEIDP 298 (488)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 4579999999999999999999999999998753
No 412
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=84.89 E-value=0.82 Score=47.65 Aligned_cols=35 Identities=23% Similarity=0.229 Sum_probs=31.6
Q ss_pred cCCEEEECC-CHHHHHHHHHHHhCCCCEEEECCCCC
Q 005056 43 VVPVLIVGA-GPVGLVLSILLTKLGIKCSVLEKNKA 77 (716)
Q Consensus 43 ~~dVlIVGa-GpaGLt~Al~Lar~Gi~v~liEr~~~ 77 (716)
...|+|.|| |-.|..++..|.+.|.+|+++.|.+.
T Consensus 10 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~ 45 (346)
T 3i6i_A 10 KGRVLIAGATGFIGQFVATASLDAHRPTYILARPGP 45 (346)
T ss_dssp -CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSC
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCC
Confidence 357999999 99999999999999999999999863
No 413
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=84.81 E-value=0.65 Score=48.17 Aligned_cols=32 Identities=28% Similarity=0.420 Sum_probs=29.7
Q ss_pred CEEEECCCHHHHHHHHHHHhCCC--CEEEECCCC
Q 005056 45 PVLIVGAGPVGLVLSILLTKLGI--KCSVLEKNK 76 (716)
Q Consensus 45 dVlIVGaGpaGLt~Al~Lar~Gi--~v~liEr~~ 76 (716)
+|.|||+|-.|.++|..|++.|+ +++++|+++
T Consensus 2 kI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~ 35 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDK 35 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCCh
Confidence 58999999999999999999999 999999864
No 414
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=84.77 E-value=0.73 Score=48.02 Aligned_cols=36 Identities=28% Similarity=0.485 Sum_probs=31.9
Q ss_pred ccCCEEEECCCHHHHHHHHHHHhCCC-CEEEECCCCC
Q 005056 42 AVVPVLIVGAGPVGLVLSILLTKLGI-KCSVLEKNKA 77 (716)
Q Consensus 42 ~~~dVlIVGaGpaGLt~Al~Lar~Gi-~v~liEr~~~ 77 (716)
....|+|||+|-.|..+|..|++.|+ +++|+|...-
T Consensus 33 ~~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D~V 69 (340)
T 3rui_A 33 KNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTV 69 (340)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCBC
T ss_pred hCCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCCEe
Confidence 35789999999999999999999999 6888998763
No 415
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=84.67 E-value=0.96 Score=45.88 Aligned_cols=33 Identities=15% Similarity=0.275 Sum_probs=30.9
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCC---CEEEECCCC
Q 005056 44 VPVLIVGAGPVGLVLSILLTKLGI---KCSVLEKNK 76 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar~Gi---~v~liEr~~ 76 (716)
..|.|||+|-.|.++|..|.+.|+ +|++++|++
T Consensus 4 ~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~ 39 (280)
T 3tri_A 4 SNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSL 39 (280)
T ss_dssp SCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSS
T ss_pred CEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCH
Confidence 579999999999999999999999 999999876
No 416
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=84.60 E-value=0.45 Score=49.93 Aligned_cols=34 Identities=18% Similarity=0.229 Sum_probs=31.5
Q ss_pred CCEEEECCCHHHHHHHHHHHhCC-------CCEEEECCCCC
Q 005056 44 VPVLIVGAGPVGLVLSILLTKLG-------IKCSVLEKNKA 77 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar~G-------i~v~liEr~~~ 77 (716)
.+|.|||+|-.|.++|..|++.| .+|++++|++.
T Consensus 9 mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~ 49 (354)
T 1x0v_A 9 KKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEED 49 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCB
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChh
Confidence 47999999999999999999999 89999999865
No 417
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=84.59 E-value=0.85 Score=45.54 Aligned_cols=34 Identities=18% Similarity=0.162 Sum_probs=30.1
Q ss_pred cCCEEEECC-C-HHHHHHHHHHHhCCCCEEEECCCC
Q 005056 43 VVPVLIVGA-G-PVGLVLSILLTKLGIKCSVLEKNK 76 (716)
Q Consensus 43 ~~dVlIVGa-G-paGLt~Al~Lar~Gi~v~liEr~~ 76 (716)
...|||.|| | -.|..+|..|+++|.+|+++.|+.
T Consensus 22 ~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~ 57 (266)
T 3o38_A 22 GKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHE 57 (266)
T ss_dssp TCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCH
Confidence 346999999 7 599999999999999999998864
No 418
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=84.52 E-value=5.7 Score=43.72 Aligned_cols=35 Identities=14% Similarity=0.268 Sum_probs=30.8
Q ss_pred CCEEEECCCHHHHHHHHHHHhC--CCCEEEECCCCCC
Q 005056 44 VPVLIVGAGPVGLVLSILLTKL--GIKCSVLEKNKAF 78 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar~--Gi~v~liEr~~~~ 78 (716)
.+|+|||+|-+|.-.+..|+++ +.+|.++=|.+..
T Consensus 247 KrV~VVG~G~SA~ei~~~L~~~~~~~~v~~~~R~~~~ 283 (501)
T 4b63_A 247 YNIAVLGSGQSAAEIFHDLQKRYPNSRTTLIMRDSAM 283 (501)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSTTCEEEEECSSSSC
T ss_pred cEEEEECCcHHHHHHHHHHHhcCCCceEEEEeCCCcc
Confidence 4699999999999999999876 7899999998754
No 419
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=84.33 E-value=0.6 Score=50.15 Aligned_cols=31 Identities=26% Similarity=0.478 Sum_probs=29.1
Q ss_pred CEEEECCCHHHHHHHHHHHhCCCCEEEECCCC
Q 005056 45 PVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (716)
Q Consensus 45 dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~ 76 (716)
+|.|||+|-+|+.+|..|++ |++|+++++++
T Consensus 2 kI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~ 32 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL-QNEVTIVDILP 32 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT-TSEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHhC-CCEEEEEECCH
Confidence 58999999999999999999 99999999875
No 420
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=84.21 E-value=0.64 Score=51.01 Aligned_cols=34 Identities=24% Similarity=0.422 Sum_probs=30.9
Q ss_pred CCEEEECCCHHHHHHHHHHHhC--CCCEEEECCCCC
Q 005056 44 VPVLIVGAGPVGLVLSILLTKL--GIKCSVLEKNKA 77 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar~--Gi~v~liEr~~~ 77 (716)
.+|.|||.|-.|+.+|..|++. |++|+++++++.
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~~ 41 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNES 41 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHH
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHH
Confidence 3799999999999999999999 899999998753
No 421
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=84.07 E-value=0.85 Score=45.99 Aligned_cols=32 Identities=22% Similarity=0.265 Sum_probs=29.6
Q ss_pred CEEEECCCHHHHHHHHHHHhCCCCEEEECCCC
Q 005056 45 PVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (716)
Q Consensus 45 dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~ 76 (716)
.|.|||+|-.|.++|..|.+.|++|+++++++
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 33 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQ 33 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEEcCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 58999999999999999999999999998764
No 422
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=84.05 E-value=0.77 Score=45.83 Aligned_cols=35 Identities=23% Similarity=0.417 Sum_probs=31.3
Q ss_pred ccCCEEEECCCHHHHHHHHHHHhCCC-CEEEECCCC
Q 005056 42 AVVPVLIVGAGPVGLVLSILLTKLGI-KCSVLEKNK 76 (716)
Q Consensus 42 ~~~dVlIVGaGpaGLt~Al~Lar~Gi-~v~liEr~~ 76 (716)
....|+|||+|-+|..+|..|++.|+ +++|+|.+.
T Consensus 27 ~~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~ 62 (251)
T 1zud_1 27 LDSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDD 62 (251)
T ss_dssp HTCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCB
T ss_pred hcCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 34689999999999999999999999 688899775
No 423
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=83.98 E-value=0.71 Score=47.26 Aligned_cols=34 Identities=18% Similarity=0.335 Sum_probs=30.7
Q ss_pred ccCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCC
Q 005056 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (716)
Q Consensus 42 ~~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~ 76 (716)
.+..|.|||+|.-|...|..|+ .|++|+++|+++
T Consensus 11 ~~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~ 44 (293)
T 1zej_A 11 HHMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSE 44 (293)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CCCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCH
Confidence 3468999999999999999999 999999999875
No 424
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=83.96 E-value=0.9 Score=45.86 Aligned_cols=33 Identities=18% Similarity=0.347 Sum_probs=30.5
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEECCCC
Q 005056 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~ 76 (716)
..|+|+|+|-+|.++|..|++.|.+|+|+.|+.
T Consensus 120 k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~~ 152 (271)
T 1nyt_A 120 LRILLIGAGGASRGVLLPLLSLDCAVTITNRTV 152 (271)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CEEEEECCcHHHHHHHHHHHHcCCEEEEEECCH
Confidence 579999999999999999999999999998774
No 425
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=83.94 E-value=0.93 Score=44.90 Aligned_cols=35 Identities=14% Similarity=0.302 Sum_probs=29.7
Q ss_pred ccCCEEEECC-CHHHHHHHHHHHhCCCCEEEECCCC
Q 005056 42 AVVPVLIVGA-GPVGLVLSILLTKLGIKCSVLEKNK 76 (716)
Q Consensus 42 ~~~dVlIVGa-GpaGLt~Al~Lar~Gi~v~liEr~~ 76 (716)
....|||.|| |-.|..+|..|+++|.+|+++.|+.
T Consensus 12 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~ 47 (260)
T 3awd_A 12 DNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDE 47 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3446899987 7889999999999999999998763
No 426
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=83.86 E-value=0.66 Score=46.72 Aligned_cols=33 Identities=27% Similarity=0.234 Sum_probs=30.7
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEECCCC
Q 005056 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~ 76 (716)
..|+|.|||-.|..++..|.++|++|+++.|++
T Consensus 6 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (286)
T 3ius_A 6 GTLLSFGHGYTARVLSRALAPQGWRIIGTSRNP 38 (286)
T ss_dssp CEEEEETCCHHHHHHHHHHGGGTCEEEEEESCG
T ss_pred CcEEEECCcHHHHHHHHHHHHCCCEEEEEEcCh
Confidence 469999999999999999999999999998865
No 427
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=83.85 E-value=0.8 Score=48.50 Aligned_cols=36 Identities=28% Similarity=0.452 Sum_probs=32.9
Q ss_pred CCccCCEEEECCCHHHHHHHHHHHhCCC-CEEEECCC
Q 005056 40 NEAVVPVLIVGAGPVGLVLSILLTKLGI-KCSVLEKN 75 (716)
Q Consensus 40 ~~~~~dVlIVGaGpaGLt~Al~Lar~Gi-~v~liEr~ 75 (716)
...+..|+|+|||-+|..+|-.|...|. +++++|++
T Consensus 185 ~l~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~ 221 (398)
T 2a9f_A 185 SLDEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKF 221 (398)
T ss_dssp CTTSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CCCccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECC
Confidence 4556899999999999999999999999 99999987
No 428
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=83.73 E-value=0.72 Score=50.76 Aligned_cols=34 Identities=32% Similarity=0.320 Sum_probs=31.1
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCC
Q 005056 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (716)
Q Consensus 43 ~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~ 76 (716)
...|+|||+|.+|..+|..|...|.+|+++|+++
T Consensus 274 GktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~ 307 (494)
T 3ce6_A 274 GKKVLICGYGDVGKGCAEAMKGQGARVSVTEIDP 307 (494)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3579999999999999999999999999999764
No 429
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=83.72 E-value=0.85 Score=48.00 Aligned_cols=34 Identities=26% Similarity=0.408 Sum_probs=31.5
Q ss_pred CEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCC
Q 005056 45 PVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (716)
Q Consensus 45 dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~ 78 (716)
.|+|+|||..|..++..+++.|++++++|.++..
T Consensus 3 ~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~~~ 36 (363)
T 4ffl_A 3 TICLVGGKLQGFEAAYLSKKAGMKVVLVDKNPQA 36 (363)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESCTTC
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCCC
Confidence 5999999999999999999999999999988754
No 430
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=83.57 E-value=0.69 Score=50.93 Aligned_cols=34 Identities=32% Similarity=0.412 Sum_probs=30.8
Q ss_pred CCEEEECCCHHHHHHHHHHHhC--CCCEEEECCCCC
Q 005056 44 VPVLIVGAGPVGLVLSILLTKL--GIKCSVLEKNKA 77 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar~--Gi~v~liEr~~~ 77 (716)
.+|.|||.|-+|+.+|..|+++ |++|+++++++.
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~~ 45 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNTA 45 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHH
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHH
Confidence 3799999999999999999998 799999998753
No 431
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=83.55 E-value=0.7 Score=47.85 Aligned_cols=33 Identities=15% Similarity=0.319 Sum_probs=30.1
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCC
Q 005056 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (716)
Q Consensus 43 ~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~ 76 (716)
.-+|+|||+|++|+-+|..|++.| +|+++++..
T Consensus 163 ~~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~~ 195 (357)
T 4a9w_A 163 GMRVAIIGGGNSGAQILAEVSTVA-ETTWITQHE 195 (357)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTS-EEEEECSSC
T ss_pred CCEEEEECCCcCHHHHHHHHHhhC-CEEEEECCC
Confidence 358999999999999999999999 799999884
No 432
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=83.50 E-value=0.85 Score=43.81 Aligned_cols=32 Identities=28% Similarity=0.450 Sum_probs=29.7
Q ss_pred CEEEEC-CCHHHHHHHHHHHhCCCCEEEECCCC
Q 005056 45 PVLIVG-AGPVGLVLSILLTKLGIKCSVLEKNK 76 (716)
Q Consensus 45 dVlIVG-aGpaGLt~Al~Lar~Gi~v~liEr~~ 76 (716)
+|+||| +|-.|..+|..|.+.|++|++++|++
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~ 34 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRRE 34 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSH
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 589999 99999999999999999999999864
No 433
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=83.49 E-value=1.2 Score=48.14 Aligned_cols=37 Identities=22% Similarity=0.368 Sum_probs=32.4
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCC
Q 005056 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (716)
Q Consensus 41 ~~~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~ 77 (716)
+....|+|+|+|..|..++..+++.|++|++++..+.
T Consensus 33 ~~~~~IlIlG~G~lg~~~~~aa~~lG~~v~v~d~~~~ 69 (419)
T 4e4t_A 33 LPGAWLGMVGGGQLGRMFCFAAQSMGYRVAVLDPDPA 69 (419)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCTT
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCc
Confidence 3446899999999999999999999999999986653
No 434
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=83.49 E-value=0.86 Score=46.74 Aligned_cols=33 Identities=15% Similarity=0.227 Sum_probs=30.6
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCC-CEEEECCCC
Q 005056 44 VPVLIVGAGPVGLVLSILLTKLGI-KCSVLEKNK 76 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar~Gi-~v~liEr~~ 76 (716)
..|+|+|+|.+|.++|..|.+.|+ +++|+.|..
T Consensus 142 ~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~ 175 (297)
T 2egg_A 142 KRILVIGAGGGARGIYFSLLSTAAERIDMANRTV 175 (297)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSH
T ss_pred CEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 579999999999999999999998 899999874
No 435
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=83.47 E-value=0.93 Score=42.86 Aligned_cols=35 Identities=26% Similarity=0.382 Sum_probs=31.7
Q ss_pred CCEEEECC-CHHHHHHHHHHHhCCCCEEEECCCCCC
Q 005056 44 VPVLIVGA-GPVGLVLSILLTKLGIKCSVLEKNKAF 78 (716)
Q Consensus 44 ~dVlIVGa-GpaGLt~Al~Lar~Gi~v~liEr~~~~ 78 (716)
..|+|.|| |-.|..++..|.++|.+|+++.|++..
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~ 39 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSR 39 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGG
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhh
Confidence 46999999 999999999999999999999998653
No 436
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=83.45 E-value=1.1 Score=49.49 Aligned_cols=35 Identities=11% Similarity=0.222 Sum_probs=32.3
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCC
Q 005056 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (716)
Q Consensus 43 ~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~ 77 (716)
...|.|||.|-.|..+|..|+++|++|++++|.+.
T Consensus 10 ~~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~~ 44 (497)
T 2p4q_A 10 SADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQS 44 (497)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSH
T ss_pred CCCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 46899999999999999999999999999998753
No 437
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=83.39 E-value=0.79 Score=49.23 Aligned_cols=34 Identities=26% Similarity=0.269 Sum_probs=31.2
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCC
Q 005056 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (716)
Q Consensus 43 ~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~ 76 (716)
...|+|||.|++|..+|..|...|.+|+++|+++
T Consensus 220 GktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp 253 (435)
T 3gvp_A 220 GKQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDP 253 (435)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 4589999999999999999999999999999864
No 438
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=83.38 E-value=0.85 Score=49.86 Aligned_cols=33 Identities=30% Similarity=0.289 Sum_probs=30.7
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEECCC
Q 005056 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKN 75 (716)
Q Consensus 43 ~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~ 75 (716)
...|||||||.+|...+..|.+.|.+|+|++..
T Consensus 12 ~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~ 44 (457)
T 1pjq_A 12 DRDCLIVGGGDVAERKARLLLEAGARLTVNALT 44 (457)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTBEEEEEESS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCC
Confidence 357999999999999999999999999999964
No 439
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=83.22 E-value=1 Score=45.84 Aligned_cols=32 Identities=25% Similarity=0.325 Sum_probs=30.1
Q ss_pred CEEEECCCHHHHHHHHHHHhCCCCEEEECCCC
Q 005056 45 PVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (716)
Q Consensus 45 dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~ 76 (716)
+|.|||+|-.|..+|..|.+.|++|++++|++
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~ 33 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFP 33 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHTTCCEEEECSST
T ss_pred eEEEEeccHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 58999999999999999999999999999865
No 440
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=83.21 E-value=0.98 Score=47.87 Aligned_cols=35 Identities=23% Similarity=0.273 Sum_probs=30.5
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCC-CEEEECCCCC
Q 005056 43 VVPVLIVGAGPVGLVLSILLTKLGI-KCSVLEKNKA 77 (716)
Q Consensus 43 ~~dVlIVGaGpaGLt~Al~Lar~Gi-~v~liEr~~~ 77 (716)
.-.|+|+|+|++|+.++..+...|. +|+++++.+.
T Consensus 194 g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~ 229 (378)
T 3uko_A 194 GSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSK 229 (378)
T ss_dssp TCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTT
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHH
Confidence 3579999999999999999988999 7999987653
No 441
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=83.18 E-value=1.1 Score=45.27 Aligned_cols=35 Identities=34% Similarity=0.470 Sum_probs=32.1
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCC
Q 005056 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (716)
Q Consensus 43 ~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~ 77 (716)
...|+|+|+|-+|.+.+..|++.|.+++|+.|...
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~~ 152 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRSSR 152 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 46899999999999999999999999999998864
No 442
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=83.18 E-value=1 Score=47.18 Aligned_cols=35 Identities=23% Similarity=0.324 Sum_probs=30.9
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCC
Q 005056 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (716)
Q Consensus 43 ~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~ 77 (716)
.-.|+|+|+|++|++++..+...|.+|+++++.+.
T Consensus 177 g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~ 211 (348)
T 3two_A 177 GTKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNEH 211 (348)
T ss_dssp TCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSST
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 35799999999999999999999999999987754
No 443
>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*
Probab=82.95 E-value=1.1 Score=46.87 Aligned_cols=34 Identities=21% Similarity=0.327 Sum_probs=30.4
Q ss_pred CCEEEECC-CHHHHHHHHHHHhCC-CCEEEECCCCC
Q 005056 44 VPVLIVGA-GPVGLVLSILLTKLG-IKCSVLEKNKA 77 (716)
Q Consensus 44 ~dVlIVGa-GpaGLt~Al~Lar~G-i~v~liEr~~~ 77 (716)
..|+|.|| |-.|..++..|.+.| .+|+++.|...
T Consensus 47 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~ 82 (357)
T 2x6t_A 47 RMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKD 82 (357)
T ss_dssp -CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSS
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCC
Confidence 56999999 999999999999999 99999998754
No 444
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=82.72 E-value=0.87 Score=46.56 Aligned_cols=33 Identities=21% Similarity=0.342 Sum_probs=30.8
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEECCCC
Q 005056 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~ 76 (716)
.+|.|||+|-.|..+|..|++.|++|++++|++
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~ 36 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQ 36 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 369999999999999999999999999999875
No 445
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=82.63 E-value=1 Score=45.60 Aligned_cols=31 Identities=19% Similarity=0.319 Sum_probs=29.1
Q ss_pred CEEEECCCHHHHHHHHHHHhCCCCEEEECCCC
Q 005056 45 PVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (716)
Q Consensus 45 dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~ 76 (716)
.|.|||+|..|...|..|++ |++|++++|++
T Consensus 3 ~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~ 33 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTF 33 (289)
T ss_dssp CEEEECCSTTHHHHHHHHHT-TSCEEEECSST
T ss_pred eEEEEcccHHHHHHHHHHhC-CCeEEEEeCCH
Confidence 69999999999999999999 99999999865
No 446
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=82.61 E-value=0.96 Score=47.82 Aligned_cols=35 Identities=23% Similarity=0.458 Sum_probs=32.3
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCC-CEEEECCC
Q 005056 41 EAVVPVLIVGAGPVGLVLSILLTKLGI-KCSVLEKN 75 (716)
Q Consensus 41 ~~~~dVlIVGaGpaGLt~Al~Lar~Gi-~v~liEr~ 75 (716)
..+..|+|+|||-+|..+|-.|...|. +++++||+
T Consensus 190 l~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 190 IEEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CCCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 456899999999999999999999999 79999987
No 447
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=82.49 E-value=0.81 Score=48.20 Aligned_cols=35 Identities=26% Similarity=0.552 Sum_probs=31.4
Q ss_pred ccCCEEEECCCHHHHHHHHHHHhCCC-CEEEECCCC
Q 005056 42 AVVPVLIVGAGPVGLVLSILLTKLGI-KCSVLEKNK 76 (716)
Q Consensus 42 ~~~dVlIVGaGpaGLt~Al~Lar~Gi-~v~liEr~~ 76 (716)
....|+|||+|-.|..+|..|++.|+ +++|+|.+.
T Consensus 117 ~~~~VlvvG~GglGs~va~~La~aGvg~i~lvD~D~ 152 (353)
T 3h5n_A 117 KNAKVVILGCGGIGNHVSVILATSGIGEIILIDNDQ 152 (353)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEECCB
T ss_pred hCCeEEEECCCHHHHHHHHHHHhCCCCeEEEECCCc
Confidence 35789999999999999999999999 688999765
No 448
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=82.49 E-value=1.2 Score=46.47 Aligned_cols=34 Identities=18% Similarity=0.352 Sum_probs=30.6
Q ss_pred ccCCEEEECCCHHHHHHHHHHHhCCC--CEEEECCC
Q 005056 42 AVVPVLIVGAGPVGLVLSILLTKLGI--KCSVLEKN 75 (716)
Q Consensus 42 ~~~dVlIVGaGpaGLt~Al~Lar~Gi--~v~liEr~ 75 (716)
...+|.|||+|-+|.++|+.|+..|+ +++|+|.+
T Consensus 18 ~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~ 53 (331)
T 4aj2_A 18 PQNKITVVGVGAVGMACAISILMKDLADELALVDVI 53 (331)
T ss_dssp CSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCC
Confidence 34689999999999999999999998 89999975
No 449
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=82.49 E-value=0.98 Score=44.07 Aligned_cols=35 Identities=31% Similarity=0.356 Sum_probs=31.7
Q ss_pred cCCEEEECC-CHHHHHHHHHHHhCCCCEEEECCCCC
Q 005056 43 VVPVLIVGA-GPVGLVLSILLTKLGIKCSVLEKNKA 77 (716)
Q Consensus 43 ~~dVlIVGa-GpaGLt~Al~Lar~Gi~v~liEr~~~ 77 (716)
...|+|.|| |-.|..++..|.++|++|+++.|++.
T Consensus 21 ~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~ 56 (236)
T 3e8x_A 21 GMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEE 56 (236)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGG
T ss_pred CCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChH
Confidence 357999998 99999999999999999999998753
No 450
>2we8_A Xanthine dehydrogenase; oxidoreductase; 2.30A {Mycobacterium smegmatis} PDB: 2we7_A
Probab=82.45 E-value=1.3 Score=47.23 Aligned_cols=37 Identities=19% Similarity=0.228 Sum_probs=33.7
Q ss_pred ccCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCCC
Q 005056 42 AVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKAF 78 (716)
Q Consensus 42 ~~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~~ 78 (716)
....++|+|||.+|..+|..++..|++|+|+|.++..
T Consensus 203 P~~rL~IfGAGhva~ala~~a~~lg~~V~v~D~R~~~ 239 (386)
T 2we8_A 203 PRPRMLVFGAIDFAAAVAQQGAFLGYRVTVCDARPVF 239 (386)
T ss_dssp CCCEEEEECCSTHHHHHHHHHHHTTCEEEEEESCTTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEECCchhh
Confidence 3468999999999999999999999999999988764
No 451
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=82.43 E-value=1.2 Score=48.93 Aligned_cols=33 Identities=12% Similarity=0.306 Sum_probs=30.9
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEECCCC
Q 005056 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~ 76 (716)
.+|.|||+|-.|..+|..|+++|++|.+++|++
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~~ 35 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 35 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred CeEEEEChHHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 479999999999999999999999999999875
No 452
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=82.42 E-value=1.3 Score=48.73 Aligned_cols=33 Identities=15% Similarity=0.292 Sum_probs=30.9
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEECCCC
Q 005056 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~ 76 (716)
.+|.|||+|-.|..+|..|+++|++|.+++|++
T Consensus 6 ~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~~ 38 (474)
T 2iz1_A 6 ANFGVVGMAVMGKNLALNVESRGYTVAIYNRTT 38 (474)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 579999999999999999999999999999864
No 453
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=82.38 E-value=1 Score=45.43 Aligned_cols=32 Identities=34% Similarity=0.395 Sum_probs=29.4
Q ss_pred CEEEECCCHHHHHHHHHHHhCCC--CEEEECCCC
Q 005056 45 PVLIVGAGPVGLVLSILLTKLGI--KCSVLEKNK 76 (716)
Q Consensus 45 dVlIVGaGpaGLt~Al~Lar~Gi--~v~liEr~~ 76 (716)
.|.|||+|..|.++|..|++.|+ +|+++++++
T Consensus 3 ~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~ 36 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 36 (281)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred EEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCH
Confidence 59999999999999999999998 899998764
No 454
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=82.27 E-value=1.1 Score=42.95 Aligned_cols=32 Identities=22% Similarity=0.308 Sum_probs=29.8
Q ss_pred CEEEECC-CHHHHHHHHHHHhCCCCEEEECCCC
Q 005056 45 PVLIVGA-GPVGLVLSILLTKLGIKCSVLEKNK 76 (716)
Q Consensus 45 dVlIVGa-GpaGLt~Al~Lar~Gi~v~liEr~~ 76 (716)
.|+|.|| |-.|..++..|.++|++|+++.|++
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNA 34 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCS
T ss_pred eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCc
Confidence 4999996 9999999999999999999999875
No 455
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=82.22 E-value=1.2 Score=45.89 Aligned_cols=32 Identities=25% Similarity=0.507 Sum_probs=29.2
Q ss_pred CEEEECCCHHHHHHHHHHHhCCC-CEEEECCCC
Q 005056 45 PVLIVGAGPVGLVLSILLTKLGI-KCSVLEKNK 76 (716)
Q Consensus 45 dVlIVGaGpaGLt~Al~Lar~Gi-~v~liEr~~ 76 (716)
+|.|||||-+|.++|+.|+..|+ .++|+|.+.
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~~l~el~L~Di~~ 33 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMRGYDDLLLIARTP 33 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCSCEEEECSST
T ss_pred CEEEECcCHHHHHHHHHHHhCCCCEEEEEcCCh
Confidence 48999999999999999999998 699999874
No 456
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=82.07 E-value=1.3 Score=45.11 Aligned_cols=34 Identities=29% Similarity=0.407 Sum_probs=31.9
Q ss_pred CCEEEECC-CHHHHHHHHHHHhCCCCEEEECCCCC
Q 005056 44 VPVLIVGA-GPVGLVLSILLTKLGIKCSVLEKNKA 77 (716)
Q Consensus 44 ~dVlIVGa-GpaGLt~Al~Lar~Gi~v~liEr~~~ 77 (716)
..|+|.|| |-.|..++..|.++|++|+++.|...
T Consensus 8 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 42 (321)
T 3vps_A 8 HRILITGGAGFIGGHLARALVASGEEVTVLDDLRV 42 (321)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSS
T ss_pred CeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCc
Confidence 57999999 99999999999999999999999876
No 457
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=82.06 E-value=0.97 Score=47.92 Aligned_cols=34 Identities=12% Similarity=0.186 Sum_probs=31.1
Q ss_pred CEEEECCCHHHHHHHHHHHhCC-------CCEEEECCCCCC
Q 005056 45 PVLIVGAGPVGLVLSILLTKLG-------IKCSVLEKNKAF 78 (716)
Q Consensus 45 dVlIVGaGpaGLt~Al~Lar~G-------i~v~liEr~~~~ 78 (716)
+|.|||+|-.|.++|..|++.| .+|++++|++..
T Consensus 23 kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~~ 63 (375)
T 1yj8_A 23 KISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEFV 63 (375)
T ss_dssp CEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC-
T ss_pred EEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChhh
Confidence 6999999999999999999999 999999998653
No 458
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=82.05 E-value=0.97 Score=46.55 Aligned_cols=32 Identities=25% Similarity=0.365 Sum_probs=29.4
Q ss_pred CEEEECCCHHHHHHHHHHHhCC--CCEEEECCCC
Q 005056 45 PVLIVGAGPVGLVLSILLTKLG--IKCSVLEKNK 76 (716)
Q Consensus 45 dVlIVGaGpaGLt~Al~Lar~G--i~v~liEr~~ 76 (716)
+|.|||+|-.|.++|..|++.| .+++++|+++
T Consensus 3 kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~ 36 (309)
T 1hyh_A 3 KIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANE 36 (309)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCH
Confidence 6999999999999999999999 6899999864
No 459
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=82.03 E-value=1.5 Score=45.88 Aligned_cols=33 Identities=24% Similarity=0.302 Sum_probs=30.8
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEECCCC
Q 005056 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~ 76 (716)
..|.|||+|-.|.++|..|++.|++|+++++++
T Consensus 17 ~~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~~ 49 (338)
T 1np3_A 17 KKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSG 49 (338)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECCTT
T ss_pred CEEEEECchHHHHHHHHHHHHCcCEEEEEECCh
Confidence 469999999999999999999999999999875
No 460
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=82.03 E-value=0.83 Score=47.57 Aligned_cols=33 Identities=21% Similarity=0.262 Sum_probs=29.3
Q ss_pred cCCEEEECC-CHHHHHHHHHHHhCCC-------CEEEECCC
Q 005056 43 VVPVLIVGA-GPVGLVLSILLTKLGI-------KCSVLEKN 75 (716)
Q Consensus 43 ~~dVlIVGa-GpaGLt~Al~Lar~Gi-------~v~liEr~ 75 (716)
..+|+|+|| |-+|.+++..|...|+ .+.++|+.
T Consensus 5 ~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~ 45 (329)
T 1b8p_A 5 PMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIP 45 (329)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCS
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCC
Confidence 357999998 9999999999999886 78999876
No 461
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=82.02 E-value=1 Score=48.26 Aligned_cols=35 Identities=26% Similarity=0.366 Sum_probs=31.5
Q ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCC
Q 005056 41 EAVVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (716)
Q Consensus 41 ~~~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~ 76 (716)
|....|+|+|||..|..++..+.+.|++|++++ .+
T Consensus 22 m~~~~I~ilGgG~lg~~l~~aa~~lG~~v~~~d-~~ 56 (403)
T 3k5i_A 22 WNSRKVGVLGGGQLGRMLVESANRLNIQVNVLD-AD 56 (403)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHHTCEEEEEE-ST
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEE-CC
Confidence 345789999999999999999999999999999 54
No 462
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=82.00 E-value=0.97 Score=45.83 Aligned_cols=36 Identities=22% Similarity=0.184 Sum_probs=32.4
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCC-CEEEECCCCCC
Q 005056 43 VVPVLIVGAGPVGLVLSILLTKLGI-KCSVLEKNKAF 78 (716)
Q Consensus 43 ~~dVlIVGaGpaGLt~Al~Lar~Gi-~v~liEr~~~~ 78 (716)
...|+|+|+|-+|.++|..|++.|+ +++|+.|....
T Consensus 117 ~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~ 153 (277)
T 3don_A 117 DAYILILGAGGASKGIANELYKIVRPTLTVANRTMSR 153 (277)
T ss_dssp GCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCGGG
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHH
Confidence 4589999999999999999999999 89999998643
No 463
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=81.99 E-value=1.3 Score=43.61 Aligned_cols=36 Identities=17% Similarity=0.222 Sum_probs=30.2
Q ss_pred CccCCEEEECC-CHHHHHHHHHHHhCCCCEEEECCCC
Q 005056 41 EAVVPVLIVGA-GPVGLVLSILLTKLGIKCSVLEKNK 76 (716)
Q Consensus 41 ~~~~dVlIVGa-GpaGLt~Al~Lar~Gi~v~liEr~~ 76 (716)
.....|+|.|| |-.|..+|..|+++|.+|+++.|+.
T Consensus 12 l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~ 48 (247)
T 3i1j_A 12 LKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTE 48 (247)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCH
Confidence 33456889997 6889999999999999999998863
No 464
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=81.92 E-value=1.4 Score=43.54 Aligned_cols=33 Identities=15% Similarity=0.236 Sum_probs=30.5
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCC----CEEEECCCC
Q 005056 44 VPVLIVGAGPVGLVLSILLTKLGI----KCSVLEKNK 76 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar~Gi----~v~liEr~~ 76 (716)
.+|.|||+|-.|..+|..|.+.|+ +|.+++|++
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~ 39 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNT 39 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCH
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCH
Confidence 479999999999999999999998 999999864
No 465
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=81.87 E-value=1 Score=45.95 Aligned_cols=34 Identities=26% Similarity=0.416 Sum_probs=31.3
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCC
Q 005056 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (716)
Q Consensus 43 ~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~ 76 (716)
...|+|||+|..|..+|..|...|.+|+++++..
T Consensus 155 g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~ 188 (293)
T 3d4o_A 155 GANVAVLGLGRVGMSVARKFAALGAKVKVGARES 188 (293)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 3579999999999999999999999999999874
No 466
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=81.76 E-value=1.1 Score=44.78 Aligned_cols=32 Identities=19% Similarity=0.312 Sum_probs=29.6
Q ss_pred CEEEECCCHHHHHHHHHHHhCC-CCEEEECCCC
Q 005056 45 PVLIVGAGPVGLVLSILLTKLG-IKCSVLEKNK 76 (716)
Q Consensus 45 dVlIVGaGpaGLt~Al~Lar~G-i~v~liEr~~ 76 (716)
.|.|||+|-.|..+|..|++.| .+|.+++|++
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~~ 34 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGA 34 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCSCEEEEECSSH
T ss_pred EEEEECchHHHHHHHHHHHHCCCCeEEEECCCH
Confidence 5899999999999999999999 9999999864
No 467
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=81.72 E-value=0.79 Score=49.59 Aligned_cols=34 Identities=29% Similarity=0.492 Sum_probs=31.1
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCC
Q 005056 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~ 77 (716)
.+..|||.|-+|+.+|..|++.|++|+++|+++.
T Consensus 12 ~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~~ 45 (431)
T 3ojo_A 12 SKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQQ 45 (431)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CccEEEeeCHHHHHHHHHHHHCCCEEEEEECCHH
Confidence 4678999999999999999999999999998853
No 468
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=81.63 E-value=1 Score=47.42 Aligned_cols=34 Identities=24% Similarity=0.402 Sum_probs=30.3
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCC
Q 005056 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~ 77 (716)
-.|+|+|+|++|+.++..++..|.+|+.+++.+.
T Consensus 181 ~~VlV~GaG~vG~~~~qlak~~Ga~Vi~~~~~~~ 214 (360)
T 1piw_A 181 KKVGIVGLGGIGSMGTLISKAMGAETYVISRSSR 214 (360)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEEESSST
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 4799999999999999998889999999997654
No 469
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=81.60 E-value=14 Score=33.62 Aligned_cols=133 Identities=10% Similarity=0.003 Sum_probs=69.9
Q ss_pred CCCCCCCCcceeeecccCCCCcceeeeeCCCCCcceEEEEEcCCccchHHH----HHHHHhhhhcCCceEEEEEcCCCCc
Q 005056 552 ANPGSRLPHMNVRVLSTVRNREIISTLDLVSGDKVEFLLIIAPVEESYHLA----RAALKVAEDFKVPTKVCVLWPAGTT 627 (716)
Q Consensus 552 ~~pG~R~PH~~l~~~~~~~~~~~~st~Dl~~~~~~~f~Ll~~~~~~~~~~~----~aa~~~a~~~g~~~~~~~~~~~~~~ 627 (716)
-.+|..+|.+-|.+ .+|+.+++-|+-|. .+||.+-.+..+.-+ ....++.+++ -.+.++.|..+..+
T Consensus 21 l~~g~~~P~f~l~~----~~G~~~~l~~~~gk----~vvl~f~~~~~C~~C~~~~~~l~~~~~~~-~~v~vv~Is~d~~~ 91 (171)
T 2yzh_A 21 LKVGDRAPEAVVVT----KDLQEKIVGGAKDV----VQVIITVPSLDTPVCETETKKFNEIMAGM-EGVDVTVVSMDLPF 91 (171)
T ss_dssp CCTTSBCCCEEEEE----TTSCEEEESSCCSS----EEEEEECSCTTSHHHHHHHHHHHHHTTTC-TTEEEEEEESSCHH
T ss_pred CCCCCcCCceEEEC----CCCCEeeHHHhCCC----eEEEEEECCCCCCchHHHHHHHHHHHHHc-CCceEEEEeCCCHH
Confidence 35889999998876 36688899998653 566665211112221 1223344444 45777777433111
Q ss_pred chhhhhhccccCCCCccchhhhhhccCCCcchhhhhcccC----------CceEEEcCCceEEEeeCCC---CCCChHHH
Q 005056 628 NEVEFRSAAELAPWKNYIDVEEVKRSSDSLSWWRICKMTD----------MGAILVRPDDHIAWRSKSG---VSGNPKLE 694 (716)
Q Consensus 628 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~----------~gavLVRPDg~VaWr~~~~---~~~~~~~~ 694 (716)
.-.+.........+.-+.|.. .... +.+++.. ...+||-|||.|.++.... ...+ ..+
T Consensus 92 ~~~~~~~~~~~~~~~~l~D~~-------~~~~-~~~gv~~~~~~~~g~~~p~~~liD~~G~i~~~~~~~~~~~~~~-~~~ 162 (171)
T 2yzh_A 92 AQKRFCESFNIQNVTVASDFR-------YRDM-EKYGVLIGEGALKGILARAVFIIDKEGKVAYVQLVPEITEEPN-YDE 162 (171)
T ss_dssp HHHHHHHHTTCCSSEEEECTT-------TCGG-GGGTCBBCSSTTTTSBCCEEEEECTTSBEEEEEECSBTTSCCC-CHH
T ss_pred HHHHHHHHcCCCCeEEeecCc-------cCcH-HHhCCEecccccCCceeeEEEEEcCCCeEEEEEeCCCcCCCCC-HHH
Confidence 001111111111222233410 1345 6677652 4689999999999987421 1122 345
Q ss_pred HHHHHHHh
Q 005056 695 MEMAFSAV 702 (716)
Q Consensus 695 l~~~~~~~ 702 (716)
+.+.|+++
T Consensus 163 ll~~l~~l 170 (171)
T 2yzh_A 163 VVNKVKEL 170 (171)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHhh
Confidence 66666654
No 470
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=81.48 E-value=1.2 Score=46.29 Aligned_cols=34 Identities=24% Similarity=0.392 Sum_probs=29.9
Q ss_pred ccCCEEEECCCHHHHHHHHHHHhCCC--CEEEECCC
Q 005056 42 AVVPVLIVGAGPVGLVLSILLTKLGI--KCSVLEKN 75 (716)
Q Consensus 42 ~~~dVlIVGaGpaGLt~Al~Lar~Gi--~v~liEr~ 75 (716)
.+.+|.|||+|-+|.++|+.|+..++ .+.|+|.+
T Consensus 8 ~~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di~ 43 (326)
T 2zqz_A 8 DHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIF 43 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCC
Confidence 34689999999999999999999886 78899974
No 471
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=81.12 E-value=1.2 Score=44.39 Aligned_cols=37 Identities=27% Similarity=0.403 Sum_probs=30.4
Q ss_pred CccCCEEEECC-CHHHHHHHHHHHhCCCCEEEECCCCC
Q 005056 41 EAVVPVLIVGA-GPVGLVLSILLTKLGIKCSVLEKNKA 77 (716)
Q Consensus 41 ~~~~dVlIVGa-GpaGLt~Al~Lar~Gi~v~liEr~~~ 77 (716)
.....|||.|| |-.|..+|..|+++|.+|+++.|+..
T Consensus 25 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~ 62 (260)
T 3gem_A 25 LSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEH 62 (260)
T ss_dssp --CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChH
Confidence 33456888887 67899999999999999999998763
No 472
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=81.02 E-value=0.8 Score=49.09 Aligned_cols=30 Identities=30% Similarity=0.330 Sum_probs=28.0
Q ss_pred CEEEECCCHHHHHHHHHHHh-CCCCEEEECC
Q 005056 45 PVLIVGAGPVGLVLSILLTK-LGIKCSVLEK 74 (716)
Q Consensus 45 dVlIVGaGpaGLt~Al~Lar-~Gi~v~liEr 74 (716)
+|.|||+|-.|.++|..|++ .|.+|+++++
T Consensus 4 kI~ViGaG~~G~~~a~~La~~~G~~V~~~~~ 34 (404)
T 3c7a_A 4 KVCVCGGGNGAHTLSGLAASRDGVEVRVLTL 34 (404)
T ss_dssp EEEEECCSHHHHHHHHHHTTSTTEEEEEECC
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCEEEEEeC
Confidence 69999999999999999998 4999999984
No 473
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=80.89 E-value=7.7 Score=35.13 Aligned_cols=136 Identities=11% Similarity=0.060 Sum_probs=70.0
Q ss_pred CCCCCCCCcceeeecccCCCCcceeeeeCCCCCcceEEEEEcCCccchHH----HHHHHHhhhhcCCceEEEEEcCCCCc
Q 005056 552 ANPGSRLPHMNVRVLSTVRNREIISTLDLVSGDKVEFLLIIAPVEESYHL----ARAALKVAEDFKVPTKVCVLWPAGTT 627 (716)
Q Consensus 552 ~~pG~R~PH~~l~~~~~~~~~~~~st~Dl~~~~~~~f~Ll~~~~~~~~~~----~~aa~~~a~~~g~~~~~~~~~~~~~~ 627 (716)
..+|..+|.+-|.+ .+|+.+++-|+-|. .+||.+-....+.. .....++.++. -.+.++.|..+..+
T Consensus 18 ~~~G~~~p~f~l~~----~~G~~~~l~~~~gk----~~vl~F~~~~~C~~C~~~~~~l~~l~~~~-~~~~vv~is~d~~~ 88 (167)
T 2jsy_A 18 VKVGDQAPDFTVLT----NSLEEKSLADMKGK----VTIISVIPSIDTGVCDAQTRRFNEEAAKL-GDVNVYTISADLPF 88 (167)
T ss_dssp CCTTSCCCCCEEEB----TTCCEEEHHHHTTS----CEEEEECSCSTTSHHHHTHHHHHHHHHHH-SSCEEEEEECSSGG
T ss_pred cCCCCcCCceEEEC----CCCCEeeHHHhCCC----eEEEEEecCCCCCchHHHHHHHHHHHHHc-CCCEEEEEECCCHH
Confidence 45899999998876 36688899998663 46665432110111 22233445555 45677777332110
Q ss_pred chhhhhhccccCCCCccchhhhhhccCCCcchhhhhcccC-------CceEEEcCCceEEEeeCCCCC-CC-hHHHHHHH
Q 005056 628 NEVEFRSAAELAPWKNYIDVEEVKRSSDSLSWWRICKMTD-------MGAILVRPDDHIAWRSKSGVS-GN-PKLEMEMA 698 (716)
Q Consensus 628 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~-------~gavLVRPDg~VaWr~~~~~~-~~-~~~~l~~~ 698 (716)
.-.+.........+..+.|.. .....+.+++.. ...+||-|||.|.++..+... .. ...++.+.
T Consensus 89 ~~~~~~~~~~~~~~~~~~d~~-------~~~~~~~~~v~~~~~g~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~~l~~~ 161 (167)
T 2jsy_A 89 AQARWCGANGIDKVETLSDHR-------DMSFGEAFGVYIKELRLLARSVFVLDENGKVVYAEYVSEATNHPNYEKPIEA 161 (167)
T ss_dssp GTSCCGGGSSCTTEEEEEGGG-------TCHHHHHTTCBBTTTCSBCCEEEEECTTSCEEEEEECSBTTSCCCSHHHHHH
T ss_pred HHHHHHHhcCCCCceEeeCCc-------hhHHHHHhCCccccCCceeeEEEEEcCCCcEEEEEecCCcCCCCCHHHHHHH
Confidence 000001100010111122200 134555677664 458999999999999753211 11 12456666
Q ss_pred HHHhh
Q 005056 699 FSAVL 703 (716)
Q Consensus 699 ~~~~~ 703 (716)
|++++
T Consensus 162 l~~ll 166 (167)
T 2jsy_A 162 AKALV 166 (167)
T ss_dssp HHHHH
T ss_pred HHHhh
Confidence 66654
No 474
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=80.86 E-value=1.2 Score=45.69 Aligned_cols=34 Identities=21% Similarity=0.383 Sum_probs=31.4
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCC
Q 005056 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (716)
Q Consensus 43 ~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~ 76 (716)
...|+|||+|..|..+|..|...|.+|++++++.
T Consensus 157 g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~ 190 (300)
T 2rir_A 157 GSQVAVLGLGRTGMTIARTFAALGANVKVGARSS 190 (300)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCEEEEEECCH
Confidence 3579999999999999999999999999999874
No 475
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=80.70 E-value=1.3 Score=42.62 Aligned_cols=32 Identities=16% Similarity=0.321 Sum_probs=29.8
Q ss_pred CEEEECC-CHHHHHHHHHHHhCCCCEEEECCCC
Q 005056 45 PVLIVGA-GPVGLVLSILLTKLGIKCSVLEKNK 76 (716)
Q Consensus 45 dVlIVGa-GpaGLt~Al~Lar~Gi~v~liEr~~ 76 (716)
.|+|.|| |-.|..++..|.++|.+|+++.|++
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDP 34 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecc
Confidence 4999998 9999999999999999999999874
No 476
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=80.57 E-value=13 Score=32.87 Aligned_cols=143 Identities=8% Similarity=0.036 Sum_probs=71.9
Q ss_pred CCCCCCCcceeeecccCCCCcceeeeeCCCCCcceEEEEEcCCccchHHHH----HHHHhhhhcC-CceEEEEEcCCCCc
Q 005056 553 NPGSRLPHMNVRVLSTVRNREIISTLDLVSGDKVEFLLIIAPVEESYHLAR----AALKVAEDFK-VPTKVCVLWPAGTT 627 (716)
Q Consensus 553 ~pG~R~PH~~l~~~~~~~~~~~~st~Dl~~~~~~~f~Ll~~~~~~~~~~~~----aa~~~a~~~g-~~~~~~~~~~~~~~ 627 (716)
.+|..+|.+-+.+ .+|+.+++-++-|. .+||.+-. ..+..+. ...++.+... ..+.++.|..+..+
T Consensus 3 ~~G~~~p~~~l~~----~~g~~~~l~~~~gk----~vll~f~~-~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~ 73 (154)
T 3kcm_A 3 LEENPAPDFTLNT----LNGEVVKLSDLKGQ----VVIVNFWA-TWCPPCREEIPSMMRLNAAMAGKPFRMLCVSIDEGG 73 (154)
T ss_dssp CTTSBCCCCEEEC----TTSCEEEGGGGTTS----EEEEEEEC-TTCHHHHHHHHHHHHHHHHTTTSSEEEEEEECCTTH
T ss_pred CCCCCCCCeEEEc----CCCCEEehhhcCCC----EEEEEEEC-CCCHHHHHHHHHHHHHHHHhccCCeEEEEEEcCCcc
Confidence 5899999998876 35677888887542 55655432 1233322 2333444443 35777777332110
Q ss_pred chhhh--hhccccCCCCccchhhhhhccCCCcchhhhhcccCCc-eEEEcCCceEEEeeCCCCCCChHHHHHHHHHHhhC
Q 005056 628 NEVEF--RSAAELAPWKNYIDVEEVKRSSDSLSWWRICKMTDMG-AILVRPDDHIAWRSKSGVSGNPKLEMEMAFSAVLG 704 (716)
Q Consensus 628 ~~~~~--~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~g-avLVRPDg~VaWr~~~~~~~~~~~~l~~~~~~~~~ 704 (716)
.+... ...... .+..+.|. .....+.+++..-- .+||-+||.|.++..+..+.+ ..++.+.|+.++.
T Consensus 74 ~~~~~~~~~~~~~-~~~~~~d~--------~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~-~~~l~~~l~~l~~ 143 (154)
T 3kcm_A 74 KVAVEEFFRKTGF-TLPVLLDA--------DKRVGKLYGTTGVPETFVIDRHGVILKKVVGAMEWD-HPEVIAFLNNELS 143 (154)
T ss_dssp HHHHHHHHHHHCC-CCCEEECT--------TCHHHHHHTCCSBCEEEEECTTSBEEEEEESCCCTT-SHHHHHHHHTC--
T ss_pred hHHHHHHHHHcCC-CeeEEecC--------chHHHHHhCCCCCCeEEEECCCCcEEEEEcCCCccc-cHHHHHHHHHHHH
Confidence 00000 000000 12122221 12455667777665 889999999999876442223 3578889998887
Q ss_pred CCCCCCcccC
Q 005056 705 IKPVNVEGTT 714 (716)
Q Consensus 705 ~~~~~~~~~~ 714 (716)
....+-++++
T Consensus 144 ~~~~~~~~~~ 153 (154)
T 3kcm_A 144 KAREGHHHHH 153 (154)
T ss_dssp ----------
T ss_pred HhhhcccccC
Confidence 7766655543
No 477
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=80.44 E-value=1.3 Score=44.76 Aligned_cols=34 Identities=26% Similarity=0.377 Sum_probs=31.1
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCCCEEEECCCC
Q 005056 43 VVPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (716)
Q Consensus 43 ~~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~ 76 (716)
...|+|||+|-+|.+.|..|.+.|+++++++|++
T Consensus 129 ~~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~~ 162 (275)
T 2hk9_A 129 EKSILVLGAGGASRAVIYALVKEGAKVFLWNRTK 162 (275)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSH
T ss_pred CCEEEEECchHHHHHHHHHHHHcCCEEEEEECCH
Confidence 3579999999999999999999999999999874
No 478
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=80.34 E-value=1.2 Score=47.78 Aligned_cols=34 Identities=29% Similarity=0.423 Sum_probs=30.6
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCC-CEEEECCCC
Q 005056 43 VVPVLIVGAGPVGLVLSILLTKLGI-KCSVLEKNK 76 (716)
Q Consensus 43 ~~dVlIVGaGpaGLt~Al~Lar~Gi-~v~liEr~~ 76 (716)
...|+|||+|..|..+|..|...|. +|++++|..
T Consensus 167 g~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~~ 201 (404)
T 1gpj_A 167 DKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTY 201 (404)
T ss_dssp TCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSH
T ss_pred CCEEEEEChHHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 3579999999999999999999999 899998764
No 479
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=80.34 E-value=1.3 Score=51.22 Aligned_cols=34 Identities=24% Similarity=0.257 Sum_probs=31.6
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEECCCCC
Q 005056 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNKA 77 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~~ 77 (716)
..|.|||+|..|...|..|++.|++|+++|+++.
T Consensus 313 ~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~~ 346 (725)
T 2wtb_A 313 KKVAIIGGGLMGSGIATALILSNYPVILKEVNEK 346 (725)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTTCCEEEECSSHH
T ss_pred cEEEEEcCCHhhHHHHHHHHhCCCEEEEEECCHH
Confidence 3699999999999999999999999999998863
No 480
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=80.28 E-value=1.5 Score=44.80 Aligned_cols=34 Identities=26% Similarity=0.339 Sum_probs=30.9
Q ss_pred CCEEEECC-CHHHHHHHHHHHhCCCCEEEECCCCC
Q 005056 44 VPVLIVGA-GPVGLVLSILLTKLGIKCSVLEKNKA 77 (716)
Q Consensus 44 ~dVlIVGa-GpaGLt~Al~Lar~Gi~v~liEr~~~ 77 (716)
..|+|+|| |-.|..++..|.+.|++|+++.|++.
T Consensus 12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~ 46 (318)
T 2r6j_A 12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNS 46 (318)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTC
T ss_pred CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCC
Confidence 36999997 99999999999999999999999864
No 481
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=80.07 E-value=1.2 Score=47.17 Aligned_cols=33 Identities=21% Similarity=0.287 Sum_probs=29.4
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEECCCC
Q 005056 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~ 76 (716)
-.|||+|+|++|+.++..+...|.+|+++++++
T Consensus 196 ~~VlV~GaG~vG~~aiqlak~~Ga~Vi~~~~~~ 228 (369)
T 1uuf_A 196 KKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSE 228 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSG
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 469999999999999998888999999888764
No 482
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=79.98 E-value=1.2 Score=46.02 Aligned_cols=34 Identities=21% Similarity=0.238 Sum_probs=30.5
Q ss_pred ccCCEEEECCC-HHHHHHHHHHHhCCCCEEEECCC
Q 005056 42 AVVPVLIVGAG-PVGLVLSILLTKLGIKCSVLEKN 75 (716)
Q Consensus 42 ~~~dVlIVGaG-paGLt~Al~Lar~Gi~v~liEr~ 75 (716)
....|+|||+| .+|..+|..|...|..|++++|.
T Consensus 176 ~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~ 210 (320)
T 1edz_A 176 YGKKCIVINRSEIVGRPLAALLANDGATVYSVDVN 210 (320)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSS
T ss_pred CCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCc
Confidence 34689999999 68999999999999999999876
No 483
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=79.97 E-value=1.4 Score=44.58 Aligned_cols=33 Identities=24% Similarity=0.414 Sum_probs=28.3
Q ss_pred CCEEEECC-CHHHHHHHHHHHhCCCCEEEECCCC
Q 005056 44 VPVLIVGA-GPVGLVLSILLTKLGIKCSVLEKNK 76 (716)
Q Consensus 44 ~dVlIVGa-GpaGLt~Al~Lar~Gi~v~liEr~~ 76 (716)
.-|||.|| |-.|..+|..|+++|.+|+++.|+.
T Consensus 29 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~ 62 (283)
T 3v8b_A 29 PVALITGAGSGIGRATALALAADGVTVGALGRTR 62 (283)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 45788886 6789999999999999999998763
No 484
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=79.96 E-value=1.6 Score=43.49 Aligned_cols=33 Identities=27% Similarity=0.505 Sum_probs=30.8
Q ss_pred CEEEECCCHHHHHHHHHHHhCCC-CEEEECCCCC
Q 005056 45 PVLIVGAGPVGLVLSILLTKLGI-KCSVLEKNKA 77 (716)
Q Consensus 45 dVlIVGaGpaGLt~Al~Lar~Gi-~v~liEr~~~ 77 (716)
.|+|+|+|-+|.+++..|.+.|+ +++|+.|...
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~~ 143 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTIE 143 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCHH
T ss_pred eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHH
Confidence 89999999999999999999999 8999999753
No 485
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=79.95 E-value=1.6 Score=45.51 Aligned_cols=33 Identities=36% Similarity=0.484 Sum_probs=29.6
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCC-CEEEECCCC
Q 005056 44 VPVLIVGAGPVGLVLSILLTKLGI-KCSVLEKNK 76 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar~Gi-~v~liEr~~ 76 (716)
-.|+|+|+|++|+.++..++..|. +|+++++++
T Consensus 169 ~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~ 202 (348)
T 2d8a_A 169 KSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSD 202 (348)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCH
Confidence 479999999999999999999999 999998753
No 486
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=79.85 E-value=1.3 Score=44.58 Aligned_cols=55 Identities=15% Similarity=0.132 Sum_probs=32.2
Q ss_pred CCCcccccccccccCCccCCCCccCCEEEECC-CHHHHHHHHHHHhCCCCEEEECCCC
Q 005056 20 PYPYGYTQCRALSDSKTIVSNEAVVPVLIVGA-GPVGLVLSILLTKLGIKCSVLEKNK 76 (716)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~dVlIVGa-GpaGLt~Al~Lar~Gi~v~liEr~~ 76 (716)
+.|........|+.+++ +......|||.|| |-.|..+|..|+++|.+|+++.|+.
T Consensus 11 ~~~~~~~g~~~m~~~~~--~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~ 66 (276)
T 3r1i_A 11 TLEAQTQGPGSMSVLDL--FDLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHS 66 (276)
T ss_dssp ------------CGGGG--GCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSG
T ss_pred ceeccccCCCCcccccc--cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 34454444444444332 2233346889987 6789999999999999999999864
No 487
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=79.84 E-value=1.4 Score=49.51 Aligned_cols=35 Identities=29% Similarity=0.503 Sum_probs=31.6
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCC-CEEEECCCCC
Q 005056 43 VVPVLIVGAGPVGLVLSILLTKLGI-KCSVLEKNKA 77 (716)
Q Consensus 43 ~~dVlIVGaGpaGLt~Al~Lar~Gi-~v~liEr~~~ 77 (716)
...|+|||+|-.|..+|..|++.|+ +++|+|...-
T Consensus 326 ~arVLIVGaGGLGs~vA~~La~aGVG~ItLvD~D~V 361 (615)
T 4gsl_A 326 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTV 361 (615)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCBC
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCCC
Confidence 4689999999999999999999999 6889998763
No 488
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=79.80 E-value=1.3 Score=46.58 Aligned_cols=33 Identities=21% Similarity=0.309 Sum_probs=29.7
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEECCCC
Q 005056 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~ 76 (716)
-.|+|+|+|++|+.++..++..|.+|+++++.+
T Consensus 182 ~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~~~~ 214 (357)
T 2cf5_A 182 LRGGILGLGGVGHMGVKIAKAMGHHVTVISSSN 214 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEEESST
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEeCCh
Confidence 469999999999999999888999999998765
No 489
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=79.74 E-value=1.6 Score=47.86 Aligned_cols=32 Identities=28% Similarity=0.485 Sum_probs=30.2
Q ss_pred CEEEECCCHHHHHHHHHHHhCCCCEEEECCCC
Q 005056 45 PVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (716)
Q Consensus 45 dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~ 76 (716)
+|.|||+|-.|..+|..|+++|++|.+++|++
T Consensus 3 kIgVIG~G~mG~~lA~~La~~G~~V~v~dr~~ 34 (478)
T 1pgj_A 3 DVGVVGLGVMGANLALNIAEKGFKVAVFNRTY 34 (478)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred EEEEEChHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 69999999999999999999999999999864
No 490
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=79.55 E-value=1.8 Score=43.23 Aligned_cols=32 Identities=28% Similarity=0.576 Sum_probs=30.2
Q ss_pred CEEEECCCHHHHHHHHHHHhCCCCEEEECCCC
Q 005056 45 PVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (716)
Q Consensus 45 dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~ 76 (716)
.|+|||+|-+|...|..|.+.|+++++++|+.
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~~ 149 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREAGLEVWVWNRTP 149 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred eEEEECCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 89999999999999999999999999999874
No 491
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=79.47 E-value=1.3 Score=46.67 Aligned_cols=33 Identities=27% Similarity=0.386 Sum_probs=29.9
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEECCCC
Q 005056 44 VPVLIVGAGPVGLVLSILLTKLGIKCSVLEKNK 76 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar~Gi~v~liEr~~ 76 (716)
-.|+|+|+|++|+.++..++..|.+|+++++.+
T Consensus 189 ~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~ 221 (366)
T 1yqd_A 189 KHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSP 221 (366)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 469999999999999999999999999998764
No 492
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=79.42 E-value=1.3 Score=42.85 Aligned_cols=35 Identities=20% Similarity=0.297 Sum_probs=31.7
Q ss_pred CCEEEECC-CHHHHHHHHHHHhCCCCEEEECCCCCC
Q 005056 44 VPVLIVGA-GPVGLVLSILLTKLGIKCSVLEKNKAF 78 (716)
Q Consensus 44 ~dVlIVGa-GpaGLt~Al~Lar~Gi~v~liEr~~~~ 78 (716)
..|+|.|| |-.|..++..|.++|++|+++.|++..
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 40 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEK 40 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGG
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCccc
Confidence 36999996 999999999999999999999998654
No 493
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=79.34 E-value=1.9 Score=43.86 Aligned_cols=34 Identities=32% Similarity=0.462 Sum_probs=30.7
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCC-CEEEECCCC
Q 005056 43 VVPVLIVGAGPVGLVLSILLTKLGI-KCSVLEKNK 76 (716)
Q Consensus 43 ~~dVlIVGaGpaGLt~Al~Lar~Gi-~v~liEr~~ 76 (716)
...|+|+|+|-+|.+++..|++.|+ +++|+.|..
T Consensus 127 ~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~ 161 (283)
T 3jyo_A 127 LDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDT 161 (283)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSH
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCH
Confidence 4579999999999999999999999 599998874
No 494
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=79.10 E-value=1.9 Score=44.43 Aligned_cols=35 Identities=17% Similarity=0.256 Sum_probs=31.4
Q ss_pred CCEEEECC-CHHHHHHHHHHHhCCCCEEEECCCCCC
Q 005056 44 VPVLIVGA-GPVGLVLSILLTKLGIKCSVLEKNKAF 78 (716)
Q Consensus 44 ~dVlIVGa-GpaGLt~Al~Lar~Gi~v~liEr~~~~ 78 (716)
..|+|.|| |-.|..++..|.++|.+|+++.|....
T Consensus 6 ~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~ 41 (341)
T 3enk_A 6 GTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNS 41 (341)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSS
T ss_pred cEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcc
Confidence 47999996 999999999999999999999987653
No 495
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=79.01 E-value=1.8 Score=45.02 Aligned_cols=34 Identities=35% Similarity=0.561 Sum_probs=30.0
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCC-CEEEECCCC
Q 005056 43 VVPVLIVGAGPVGLVLSILLTKLGI-KCSVLEKNK 76 (716)
Q Consensus 43 ~~dVlIVGaGpaGLt~Al~Lar~Gi-~v~liEr~~ 76 (716)
.-.|+|+|+|++|+.++..+...|. +|+.+++.+
T Consensus 165 g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~ 199 (343)
T 2dq4_A 165 GKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNP 199 (343)
T ss_dssp TSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCH
Confidence 3579999999999999999988999 999998753
No 496
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=78.98 E-value=1.5 Score=45.27 Aligned_cols=34 Identities=21% Similarity=0.322 Sum_probs=30.8
Q ss_pred cCCEEEECCCHHHHHHHHHHHhCCC-CEEEECCCC
Q 005056 43 VVPVLIVGAGPVGLVLSILLTKLGI-KCSVLEKNK 76 (716)
Q Consensus 43 ~~dVlIVGaGpaGLt~Al~Lar~Gi-~v~liEr~~ 76 (716)
...|+|+|+|-+|.++|..|++.|+ +|+|+.|.+
T Consensus 154 gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~~ 188 (315)
T 3tnl_A 154 GKKMTICGAGGAATAICIQAALDGVKEISIFNRKD 188 (315)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSS
T ss_pred CCEEEEECCChHHHHHHHHHHHCCCCEEEEEECCC
Confidence 3579999999999999999999999 799999874
No 497
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=78.84 E-value=2.2 Score=44.50 Aligned_cols=36 Identities=31% Similarity=0.395 Sum_probs=31.5
Q ss_pred ccCCEEEECC-CHHHHHHHHHHHh--CCCCEEEECCCCC
Q 005056 42 AVVPVLIVGA-GPVGLVLSILLTK--LGIKCSVLEKNKA 77 (716)
Q Consensus 42 ~~~dVlIVGa-GpaGLt~Al~Lar--~Gi~v~liEr~~~ 77 (716)
....|+|.|| |-.|..++..|.+ .|++|+++.|...
T Consensus 9 ~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~ 47 (362)
T 3sxp_A 9 ENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRS 47 (362)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCc
Confidence 3357999976 9999999999999 9999999998664
No 498
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=78.75 E-value=1.8 Score=45.23 Aligned_cols=33 Identities=30% Similarity=0.464 Sum_probs=28.9
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCC-CEEEECCCC
Q 005056 44 VPVLIVGAGPVGLVLSILLTKLGI-KCSVLEKNK 76 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar~Gi-~v~liEr~~ 76 (716)
-.|+|+|+|++|+.++..+...|. +|+++++.+
T Consensus 168 ~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~ 201 (352)
T 3fpc_A 168 DTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRK 201 (352)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCH
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCH
Confidence 569999999999999988888899 799988653
No 499
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=78.68 E-value=1.5 Score=46.40 Aligned_cols=33 Identities=24% Similarity=0.271 Sum_probs=29.0
Q ss_pred CCEEEECCCHHHHHHHHHHHhCCC-CEEEECCCC
Q 005056 44 VPVLIVGAGPVGLVLSILLTKLGI-KCSVLEKNK 76 (716)
Q Consensus 44 ~dVlIVGaGpaGLt~Al~Lar~Gi-~v~liEr~~ 76 (716)
-.|+|+|+|++|+.++..++..|. +|+++++.+
T Consensus 197 ~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~ 230 (376)
T 1e3i_A 197 STCAVFGLGCVGLSAIIGCKIAGASRIIAIDING 230 (376)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCG
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCH
Confidence 469999999999999998888999 788888654
No 500
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=78.65 E-value=21 Score=31.25 Aligned_cols=139 Identities=11% Similarity=0.047 Sum_probs=70.5
Q ss_pred CCCCCCCCcceeeecccCCCCcceeeeeCCCCCcceEEEEEcCCccchHHHH----HHHHhhhhcC-CceEEEEEcCCCC
Q 005056 552 ANPGSRLPHMNVRVLSTVRNREIISTLDLVSGDKVEFLLIIAPVEESYHLAR----AALKVAEDFK-VPTKVCVLWPAGT 626 (716)
Q Consensus 552 ~~pG~R~PH~~l~~~~~~~~~~~~st~Dl~~~~~~~f~Ll~~~~~~~~~~~~----aa~~~a~~~g-~~~~~~~~~~~~~ 626 (716)
-.+|..+|.+-|.+ +++.+++-|+-|. .+||.+-. ..+..+. ...++.++.. -.+.++.|..+..
T Consensus 3 l~~G~~~P~f~l~~-----~g~~~~l~~~~gk----~vll~f~~-~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~ 72 (152)
T 3gl3_A 3 LDKGDKAPDFALPG-----KTGVVKLSDKTGS----VVYLDFWA-SWCGPCRQSFPWMNQMQAKYKAKGFQVVAVNLDAK 72 (152)
T ss_dssp CCTTSBCCCCEEEB-----SSSEEEGGGGTTS----EEEEEEEC-TTCTHHHHHHHHHHHHHHHHGGGTEEEEEEECCSS
T ss_pred CCCCCcCCceEeeC-----CCCeEeHHHhCCC----EEEEEEEC-CcCHHHHHHHHHHHHHHHHhhcCCeEEEEEECCCC
Confidence 45899999998875 3467788887553 55554432 1122222 2233333332 1266666632211
Q ss_pred cchhhhhhcccc-C-CCCccchhhhhhccCCCcchhhhhcccCCc-eEEEcCCceEEEeeCCCCCCChHHHHHHHHHHhh
Q 005056 627 TNEVEFRSAAEL-A-PWKNYIDVEEVKRSSDSLSWWRICKMTDMG-AILVRPDDHIAWRSKSGVSGNPKLEMEMAFSAVL 703 (716)
Q Consensus 627 ~~~~~~~~~~~~-~-~~~~~~d~~~~~~~~~~~~~~~~~~~~~~g-avLVRPDg~VaWr~~~~~~~~~~~~l~~~~~~~~ 703 (716)
..+....... . .+..+.|. .....+.+++..-- .+||-|||-|.++..+..+ ....+|.+.|...+
T Consensus 73 --~~~~~~~~~~~~~~~~~~~d~--------~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~-~~~~~l~~~i~~~~ 141 (152)
T 3gl3_A 73 --TGDAMKFLAQVPAEFTVAFDP--------KGQTPRLYGVKGMPTSFLIDRNGKVLLQHVGFRP-ADKEALEQQILAAL 141 (152)
T ss_dssp --HHHHHHHHHHSCCCSEEEECT--------TCHHHHHTTCCSSSEEEEECTTSBEEEEEESCCT-TTHHHHHHHHHHHT
T ss_pred --HHHHHHHHHHcCCCCceeECC--------cchhHHHcCCCCCCeEEEECCCCCEEEEEccCCC-cCHHHHHHHHHHHH
Confidence 0000000000 0 11112221 12455567776654 4889999999999875422 33467999999988
Q ss_pred CCCCCCCc
Q 005056 704 GIKPVNVE 711 (716)
Q Consensus 704 ~~~~~~~~ 711 (716)
+..+.+-.
T Consensus 142 ~~~~~~~~ 149 (152)
T 3gl3_A 142 GGNEGHHH 149 (152)
T ss_dssp C-------
T ss_pred cccccccc
Confidence 77655433
Done!