Your job contains 1 sequence.
>005060
MAVVGEEGKASGSRRMAAHHRKHMDDALPTKHKPAEAGGKNELYNELWRACAGPLVYVPR
VGDIVYYFLQGHMEQVEAYNSQDDKAELPIYNLPPKILCEVVYAQLKAEPGTDEVFAQIT
LLPRPEIDELSLEVGNSPPLPPKLNVCSFSKKLTPSDTSTHGGFSVPKRHADECLPPLDM
SKDPPLQELVAKDLHGLEWRFRHIYRGQPKRHLLTSGWSVFVTSKKLVAGDVCIFLRGGD
GELRVGVRRAMKLQNNASTSVISSLSMQHGILAGAFHAISTGTRFTVYYHPWTRPAEFLV
PFSQYMKSAEIDYSIGTRFRMVFEGEECADQRIAGTVVGTEDVDHIRWPASEWRCLKVKW
DATTDSITRPARVSPWNIEPIERTHKRPASVQHQQKRLRPNDASSPWFSSLFSNGVFQGQ
ENRVTGVKALGAAKTPLLPSLVRPPNPVWAQMQSGLENKLKFPMHDPFYMCLNRMVSLPG
GSLMSPGLSNHWPASPFAPYEVCETAAQSKNLSVPNASSENSGSQMCMALELKDENRTPL
AQPNGGSRYMLFGVNLVNSPPELPSPQMATSNELESPCSVPPTSQSSISETIQVSEPSKS
VSGILSEKQCKNCYVSRSCTKVIKFGTALGRSVDLTRFHGYDELISELDQMFDFNGSLID
GNSGFHIAYMDDEGDMMLVGDNPWQDFQCAVRRMFICPKEDIDGVIPSSPNPTPPQ
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 005060
(716 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2174013 - symbol:ARF2 "auxin response factor 2... 1178 7.5e-148 2
TAIR|locus:2025991 - symbol:ARF1 "auxin response factor 1... 1035 3.4e-128 2
TAIR|locus:2138096 - symbol:ARF9 "auxin response factor 9... 996 8.9e-128 2
TAIR|locus:2039124 - symbol:ARF11 "auxin response factor ... 1009 6.5e-123 2
TAIR|locus:2076765 - symbol:ARF18 "auxin response factor ... 980 5.9e-120 2
TAIR|locus:2026145 - symbol:ARF12 "auxin response factor ... 881 1.0e-109 2
TAIR|locus:2014731 - symbol:ARF14 "auxin response factor ... 878 6.4e-108 2
TAIR|locus:2175098 - symbol:ARF4 "auxin response factor 4... 858 2.1e-107 2
TAIR|locus:2009298 - symbol:ARF21 "auxin response factor ... 860 3.5e-107 2
TAIR|locus:2036288 - symbol:ARF22 "auxin response factor ... 868 6.5e-106 2
TAIR|locus:2202205 - symbol:ARF19 "auxin response factor ... 858 3.5e-105 3
TAIR|locus:2204237 - symbol:ARF6 "auxin response factor 6... 857 2.2e-103 2
TAIR|locus:2152642 - symbol:ARF8 "auxin response factor 8... 857 2.8e-103 2
TAIR|locus:2206717 - symbol:ARF20 "auxin response factor ... 839 4.6e-103 2
TAIR|locus:2035454 - symbol:MP "MONOPTEROS" species:3702 ... 837 4.7e-99 2
TAIR|locus:2008991 - symbol:ARF13 "AUXIN RESPONSE FACTOR ... 594 5.4e-91 3
TAIR|locus:2057609 - symbol:ETT "ETTIN" species:3702 "Ara... 827 1.7e-82 1
TAIR|locus:2057517 - symbol:ARF10 "auxin response factor ... 504 3.6e-76 4
TAIR|locus:2126460 - symbol:ARF16 "auxin response factor ... 468 4.5e-64 3
TAIR|locus:2037169 - symbol:ARF23 "auxin response factor ... 525 1.7e-50 1
TAIR|locus:2029436 - symbol:ARF17 "auxin response factor ... 418 1.6e-45 2
TAIR|locus:2039165 - symbol:ABS2 "ABNORMAL SHOOT 2" speci... 169 1.9e-10 1
TAIR|locus:2200950 - symbol:NGA3 "NGATHA3" species:3702 "... 178 1.9e-10 2
TAIR|locus:2041404 - symbol:NGA1 "NGATHA1" species:3702 "... 175 2.2e-10 1
TAIR|locus:2164215 - symbol:DPA4 "DEVELOPMENT-RELATED PcG... 154 6.0e-10 2
TAIR|locus:2090527 - symbol:IAA31 "indole-3-acetic acid i... 150 1.4e-09 1
TAIR|locus:2180557 - symbol:IAA28 "AT5G25890" species:370... 149 1.8e-09 1
TAIR|locus:2098023 - symbol:IAA30 "indole-3-acetic acid i... 146 3.9e-09 1
TAIR|locus:2117007 - symbol:NGA4 "NGATHA4" species:3702 "... 165 3.9e-09 1
TAIR|locus:2041324 - symbol:IAA20 "indole-3-acetic acid i... 144 6.3e-09 1
TAIR|locus:2205319 - symbol:RAV1 "related to ABI3/VP1 1" ... 162 9.3e-09 1
UNIPROTKB|Q6K846 - symbol:IAA9 "Auxin-responsive protein ... 141 1.3e-08 1
TAIR|locus:2018379 - symbol:SHY2 "SHORT HYPOCOTYL 2" spec... 141 1.3e-08 1
TAIR|locus:2170862 - symbol:ATAUX2-11 "AT5G43700" species... 138 2.8e-08 1
TAIR|locus:2129910 - symbol:IAA1 "indole-3-acetic acid in... 137 3.6e-08 1
TAIR|locus:2079537 - symbol:NGA2 "NGATHA2" species:3702 "... 155 3.7e-08 1
TAIR|locus:2090141 - symbol:IAA19 "indole-3-acetic acid i... 141 6.6e-08 1
TAIR|locus:2012438 - symbol:RAV2 "related to ABI3/VP1 2" ... 153 9.9e-08 1
TAIR|locus:2085969 - symbol:EDF3 "ethylene response DNA b... 152 1.1e-07 1
TAIR|locus:2197838 - symbol:IAA12 "indole-3-acetic acid i... 145 2.1e-07 1
TAIR|locus:2031185 - symbol:TEM1 "TEMPRANILLO 1" species:... 154 2.2e-07 2
TAIR|locus:2051154 - symbol:IAA13 "auxin-induced protein ... 141 7.3e-07 1
TAIR|locus:2080782 - symbol:AT3G11580 species:3702 "Arabi... 142 7.7e-07 1
UNIPROTKB|Q652A1 - symbol:IAA26 "Auxin-responsive protein... 122 1.4e-06 1
TAIR|locus:2020255 - symbol:IAA10 "indoleacetic acid-indu... 105 1.5e-06 2
TAIR|locus:2094578 - symbol:IAA2 "indole-3-acetic acid in... 126 1.6e-06 1
TAIR|locus:2195820 - symbol:IAA18 "indole-3-acetic acid i... 117 1.9e-06 2
TAIR|locus:2088324 - symbol:PAP1 "phytochrome-associated ... 115 3.3e-06 2
UNIPROTKB|Q9LG86 - symbol:IAA2 "Auxin-responsive protein ... 134 4.2e-06 1
UNIPROTKB|Q75GK1 - symbol:IAA12 "Auxin-responsive protein... 132 5.7e-06 1
UNIPROTKB|Q6ZL57 - symbol:IAA24 "Auxin-responsive protein... 129 1.1e-05 1
UNIPROTKB|P49679 - symbol:IAA4/5 "Auxin-induced protein I... 125 1.3e-05 1
UNIPROTKB|Q7Y1H8 - symbol:IAA14 "Auxin-responsive protein... 124 2.3e-05 1
TAIR|locus:2139890 - symbol:IAA11 "indole-3-acetic acid i... 105 7.0e-05 2
UNIPROTKB|Q5VRR0 - symbol:IAA20 "Auxin-responsive protein... 118 8.9e-05 1
TAIR|locus:2116592 - symbol:HSL1 "HSI2-like 1" species:37... 130 0.00016 2
ZFIN|ZDB-GENE-050208-261 - symbol:phip "pleckstrin homolo... 104 0.00024 3
TAIR|locus:2034200 - symbol:IAA15 "indole-3-acetic acid i... 114 0.00025 1
UNIPROTKB|Q8LQ74 - symbol:IAA6 "Auxin-responsive protein ... 98 0.00029 2
UNIPROTKB|F1N8L6 - symbol:BRWD3 "Uncharacterized protein"... 119 0.00030 2
UNIPROTKB|Q6AT10 - symbol:IAA15 "Auxin-responsive protein... 114 0.00059 1
UNIPROTKB|Q75GB1 - symbol:IAA17 "Auxin-responsive protein... 116 0.00062 1
ZFIN|ZDB-GENE-041111-120 - symbol:brwd1 "bromodomain and ... 107 0.00075 2
>TAIR|locus:2174013 [details] [associations]
symbol:ARF2 "auxin response factor 2" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0009725 "response
to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IMP;TAS] [GO:0009911 "positive regulation of flower
development" evidence=IMP] [GO:0010047 "fruit dehiscence"
evidence=IMP] [GO:0010150 "leaf senescence" evidence=IMP]
[GO:0010227 "floral organ abscission" evidence=IMP] [GO:0008285
"negative regulation of cell proliferation" evidence=IMP]
[GO:0048481 "ovule development" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009737 "response to abscisic acid
stimulus" evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0042744 "hydrogen peroxide catabolic process"
evidence=RCA] InterPro:IPR003311 InterPro:IPR003340
InterPro:IPR010525 InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362
Pfam:PF06507 PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019
GO:GO:0009737 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0045892 GO:GO:0008285 GO:GO:0009734 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 GO:GO:0010150 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 GO:GO:0009911 GO:GO:0010047
GO:GO:0010227 GO:GO:0048481 EMBL:AY669787 EMBL:AB016880
EMBL:AF336918 EMBL:AF378862 EMBL:BT000784 EMBL:BT001072
EMBL:AK221252 EMBL:AK221254 EMBL:AK221274 EMBL:AK221277
EMBL:AK221282 EMBL:AK221305 EMBL:U89771 EMBL:AJ441313 EMBL:AJ458328
IPI:IPI00518739 RefSeq:NP_201006.2 RefSeq:NP_851244.1
RefSeq:NP_974980.1 UniGene:At.21704 ProteinModelPortal:Q94JM3
SMR:Q94JM3 DIP:DIP-46014N IntAct:Q94JM3 STRING:Q94JM3 PaxDb:Q94JM3
PRIDE:Q94JM3 EnsemblPlants:AT5G62000.1 EnsemblPlants:AT5G62000.2
EnsemblPlants:AT5G62000.3 GeneID:836321 KEGG:ath:AT5G62000
GeneFarm:3364 TAIR:At5g62000 eggNOG:NOG255064 InParanoid:Q94JM3
OMA:HTESVEC PhylomeDB:Q94JM3 ProtClustDB:CLSN2680590
Genevestigator:Q94JM3 GermOnline:AT5G62000 Uniprot:Q94JM3
Length = 859
Score = 1178 (419.7 bits), Expect = 7.5e-148, Sum P(2) = 7.5e-148
Identities = 247/416 (59%), Positives = 290/416 (69%)
Query: 1 MAVVGEEGKASGSRRMAAHHRKHMDDALPTKHKPAEAGGKNELYNELWRACAGPLVYVPR 60
++V GE G+ S S R AA R +D P A LY ELW ACAGPLV VPR
Sbjct: 31 VSVAGE-GQKSNSTRSAAAERA-LD--------PEAA-----LYRELWHACAGPLVTVPR 75
Query: 61 VGDIVYYFLQGHMEQVEAYNSQDDKAELPIYNLPPKILCEVVYAQLKAEPGTDEVFAQIT 120
D V+YF QGH+EQVEA +Q + ++P+Y+LP K+LC V+ LKAE TDEV+AQIT
Sbjct: 76 QDDRVFYFPQGHIEQVEASTNQAAEQQMPLYDLPSKLLCRVINVDLKAEADTDEVYAQIT 135
Query: 121 LLPRPEIDELSLEVGNSPPLPPKLNVCSFSKKLTPSDTSTHGGFSVPKRHADECLPPLDM 180
LLP DE ++E P PP+ V SF K LT SDTSTHGGFSV +RHADECLPPLDM
Sbjct: 136 LLPEANQDENAIEKEAPLPPPPRFQVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDM 195
Query: 181 SKDPPLQELVAKDLHGLEWRFRHIYRGQPKRHLLTSGWSVFVTSKKLVAGDVCIFLRGGD 240
S+ PP QELVAKDLH EWRFRHI+RGQP+RHLL SGWSVFV+SK+LVAGD IFLRG +
Sbjct: 196 SRQPPTQELVAKDLHANEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGEN 255
Query: 241 GELRVGVRRAMKLQNNASTSVISSLSMQHGILAGAFHAISTGTRFTVYYHPWTRPAEFLV 300
GELRVGVRRAM+ Q N +SVISS SM G+LA A+HAISTGT FTVYY P T P+EF+V
Sbjct: 256 GELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAISTGTMFTVYYKPRTSPSEFIV 315
Query: 301 PFSQYMKSAEIDYSIGTRFRMVFEGEECADQRIAGTVVGTEDVDHIRWPASEWRCLKVKW 360
PF QYM+S + +YSIG RF+M FEGEE +QR GT+VG E+ D RWP S+WR LKV+W
Sbjct: 316 PFDQYMESVKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEESDPTRWPKSKWRSLKVRW 375
Query: 361 DATTDSITRPARVSPWNIEPIERTHKRPASVQHQQKRLRPNDA-SSPWFSSLFSNG 415
D T+ SI RP RVSPW +EP + KR R N A SSP S L G
Sbjct: 376 DETS-SIPRPDRVSPWKVEPALAPPALSPVPMPRPKRPRSNIAPSSPDSSMLTREG 430
Score = 287 (106.1 bits), Expect = 7.5e-148, Sum P(2) = 7.5e-148
Identities = 67/171 (39%), Positives = 97/171 (56%)
Query: 551 LFGVNLVNSPPELPSPQMATSNELESPCSVPPTSQSSISETIQVSEPSKSVSGILSEK-- 608
LFG+ L N+ S M+ N L + + + + S+ SKS + +
Sbjct: 656 LFGIPLTNNMNGTDST-MSQRNNLNDAAGLTQIASPKVQDLSDQSKGSKSTNDHREQGRP 714
Query: 609 -QCKNCYV---------SRSCTKVIKFGTALGRSVDLTRFHGYDELISELDQMFDFNGSL 658
Q N + SRSCTKV K G ALGRSVDL++F Y+EL++ELD++F+FNG L
Sbjct: 715 FQTNNPHPKDAQTKTNSSRSCTKVHKQGIALGRSVDLSKFQNYEELVAELDRLFEFNGEL 774
Query: 659 IDGNSGFHIAYMDDEGDMMLVGDNPWQDFQCAVRRMFICPKEDIDGVIPSS 709
+ + I Y D+E DMMLVGD+PWQ+F C VR++FI KE++ + P +
Sbjct: 775 MAPKKDWLIVYTDEENDMMLVGDDPWQEFCCMVRKIFIYTKEEVRKMNPGT 825
>TAIR|locus:2025991 [details] [associations]
symbol:ARF1 "auxin response factor 1" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;IDA;IPI] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;TAS] [GO:0009725 "response to hormone stimulus"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;TAS] [GO:0010150 "leaf
senescence" evidence=IGI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0006306 "DNA methylation" evidence=RCA]
[GO:0006342 "chromatin silencing" evidence=RCA] [GO:0006346
"methylation-dependent chromatin silencing" evidence=RCA]
[GO:0007267 "cell-cell signaling" evidence=RCA] [GO:0009616 "virus
induced gene silencing" evidence=RCA] [GO:0010267 "production of
ta-siRNAs involved in RNA interference" evidence=RCA] [GO:0016246
"RNA interference" evidence=RCA] [GO:0035196 "production of miRNAs
involved in gene silencing by miRNA" evidence=RCA] [GO:0009733
"response to auxin stimulus" evidence=IEP] InterPro:IPR003311
InterPro:IPR003340 InterPro:IPR010525 InterPro:IPR011525
Pfam:PF02309 Pfam:PF02362 Pfam:PF06507 PROSITE:PS50863
PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0045892 GO:GO:0009733
GO:GO:0009734 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0010150 EMBL:AC007258 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 EMBL:U83245 EMBL:AY133723 EMBL:BT002748
IPI:IPI00518211 IPI:IPI00520405 PIR:D96621 RefSeq:NP_001031208.1
RefSeq:NP_176184.1 RefSeq:NP_849830.1 UniGene:At.74832
ProteinModelPortal:Q8L7G0 SMR:Q8L7G0 IntAct:Q8L7G0 STRING:Q8L7G0
EnsemblPlants:AT1G59750.1 EnsemblPlants:AT1G59750.3 GeneID:842268
KEGG:ath:AT1G59750 GeneFarm:3363 TAIR:At1g59750 eggNOG:NOG257828
HOGENOM:HOG000241141 InParanoid:Q8L7G0 KO:K14486 OMA:QMPSFNL
PhylomeDB:Q8L7G0 ProtClustDB:CLSN2679699 Genevestigator:Q8L7G0
GermOnline:AT1G59750 Uniprot:Q8L7G0
Length = 665
Score = 1035 (369.4 bits), Expect = 3.4e-128, Sum P(2) = 3.4e-128
Identities = 208/380 (54%), Positives = 263/380 (69%)
Query: 30 TKHKPAEAGG--KNELYNELWRACAGPLVYVPRVGDIVYYFLQGHMEQVEAYNSQDDKAE 87
+ H + GG + L ELW ACAGPLV +PR G+ VYYF +GHMEQ+EA Q + +
Sbjct: 4 SNHSSGKPGGVLSDALCRELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLEQQ 63
Query: 88 LPIYNLPPKILCEVVYAQLKAEPGTDEVFAQITLLPRPEIDELSLEVGNSPPLPP-KLNV 146
+P +NLP KILC+V+ Q +AEP TDEV+AQITLLP E+D+ ++P P K V
Sbjct: 64 MPSFNLPSKILCKVINIQRRAEPETDEVYAQITLLP--ELDQSEPTSPDAPVQEPEKCTV 121
Query: 147 CSFSKKLTPSDTSTHGGFSVPKRHADECLPPLDMSKDPPLQELVAKDLHGLEWRFRHIYR 206
SF K LT SDTSTHGGFSV +RHAD+CLPPLDMS+ PP QELVA DLH EW FRHI+R
Sbjct: 122 HSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNSEWHFRHIFR 181
Query: 207 GQPKRHLLTSGWSVFVTSKKLVAGDVCIFLRGGDGELRVGVRRAMKLQNNASTSVISSLS 266
GQP+RHLLT+GWSVFV+SKKLVAGD IFLRG + ELRVGVRR M+ Q N +SVISS S
Sbjct: 182 GQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVISSHS 241
Query: 267 MQHGILAGAFHAISTGTRFTVYYHPWTRPAEFLVPFSQYMKSAEIDYSIGTRFRMVFEGE 326
M G+LA A HAI+TGT F+V+Y P T +EF+V ++Y+++ S+G RF+M FEGE
Sbjct: 242 MHIGVLATAAHAITTGTIFSVFYKPRTSRSEFIVSVNRYLEAKTQKLSVGMRFKMRFEGE 301
Query: 327 ECADQRIAGTVVGTEDVDHIRWPASEWRCLKVKWDATTDSITRPARVSPWNIEPIERTHK 386
E ++R +GT+VG ++ W SEWR LKV+WD + S+ RP RVSPW +EP+
Sbjct: 302 EAPEKRFSGTIVGVQENKSSVWHDSEWRSLKVQWDEPS-SVFRPERVSPWELEPLVANST 360
Query: 387 RPASVQHQQKRLRPNDASSP 406
+ Q Q+ RP P
Sbjct: 361 PSSQPQPPQRNKRPRPPGLP 380
Score = 244 (91.0 bits), Expect = 3.4e-128, Sum P(2) = 3.4e-128
Identities = 52/143 (36%), Positives = 79/143 (55%)
Query: 567 QMATSNELESPCSVPPTSQSSISETIQVSEPSKSVSGILSEKQCKNCYVSRSCTKVIKFG 626
Q SNE +S P + + +P KS E Q + RSCTKV G
Sbjct: 495 QPVPSNEFDSGQQSEPLNINQSDIPSGSGDPEKSSLRSPQESQSRQI---RSCTKVHMQG 551
Query: 627 TALGRSVDLTRFHGYDELISELDQMFDFNGSLIDGNSGFHIAYMDDEGDMMLVGDNPWQD 686
+A+GR++DLTR Y++L +L++MFD G L++ + + Y DDE DMM+VGD+PW +
Sbjct: 552 SAVGRAIDLTRSECYEDLFKKLEEMFDIKGELLESTKKWQVVYTDDEDDMMMVGDDPWNE 611
Query: 687 FQCAVRRMFICPKEDIDGVIPSS 709
F VR++FI E++ + P +
Sbjct: 612 FCGMVRKIFIYTPEEVKKLSPKN 634
Score = 51 (23.0 bits), Expect = 8.1e-108, Sum P(2) = 8.1e-108
Identities = 20/67 (29%), Positives = 28/67 (41%)
Query: 536 NRTPLAQPNGGSRYMLFGVNLVNSPPELPSPQMATSNELESPCSVPPTSQSSISETIQVS 595
N TP +QP R N PP LPSP S + +P V + + S S
Sbjct: 358 NSTPSSQPQPPQR------NKRPRPPGLPSPATGPSGPV-TPDGVWKSPADTPSSVPLFS 410
Query: 596 EPSKSVS 602
P+K+ +
Sbjct: 411 PPAKAAT 417
Score = 42 (19.8 bits), Expect = 1.5e-16, Sum P(2) = 1.5e-16
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 21 RKHMDDALP----TKHKPAEAGGKNELYNELW 48
R+H DD LP ++ P + +L+N W
Sbjct: 143 RRHADDCLPPLDMSQQPPWQELVATDLHNSEW 174
>TAIR|locus:2138096 [details] [associations]
symbol:ARF9 "auxin response factor 9" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;TAS] [GO:0009725 "response to hormone stimulus"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR003311 InterPro:IPR003340
InterPro:IPR010525 InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362
Pfam:PF06507 PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009734
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 HOGENOM:HOG000241141
EMBL:AF082176 EMBL:AC002343 EMBL:AL078468 EMBL:AL161560
EMBL:AF344312 EMBL:AK221865 EMBL:AK228263 IPI:IPI00519218
IPI:IPI00657180 PIR:T08917 RefSeq:NP_001031706.1 RefSeq:NP_194129.1
UniGene:At.3396 ProteinModelPortal:Q9XED8 SMR:Q9XED8 IntAct:Q9XED8
PaxDb:Q9XED8 PRIDE:Q9XED8 EnsemblPlants:AT4G23980.1 GeneID:828498
KEGG:ath:AT4G23980 GeneFarm:3373 TAIR:At4g23980 eggNOG:NOG300390
InParanoid:Q9XED8 OMA:YAQITLI PhylomeDB:Q9XED8
ProtClustDB:CLSN2685375 Genevestigator:Q9XED8 Uniprot:Q9XED8
Length = 638
Score = 996 (355.7 bits), Expect = 8.9e-128, Sum P(2) = 8.9e-128
Identities = 200/367 (54%), Positives = 259/367 (70%)
Query: 35 AEAGGKNELYNELWRACAGPLVYVPRVGDIVYYFLQGHMEQVEAYNSQDDKAEL-PIYNL 93
A GG+ LY+ELW+ CAGPLV VP+ + VYYF QGHMEQ+EA Q D + P++ L
Sbjct: 2 ANRGGEY-LYDELWKLCAGPLVDVPQAQERVYYFPQGHMEQLEASTQQVDLNTMKPLFVL 60
Query: 94 PPKILCEVVYAQLKAEPGTDEVFAQITLLP-RPEIDELSLEVGNSPPLPPKLNVCSFSKK 152
PPKILC V+ L+AE TDEV+AQITL+P E+DE + SPP + V SFSK
Sbjct: 61 PPKILCNVMNVSLQAEKDTDEVYAQITLIPVGTEVDE-PMSPDPSPPELQRPKVHSFSKV 119
Query: 153 LTPSDTSTHGGFSVPKRHADECLPPLDMSKDPPLQELVAKDLHGLEWRFRHIYRGQPKRH 212
LT SDTSTHGGFSV ++HA ECLPPLDM++ P QELVA+D+HG +W+F+HI+RGQP+RH
Sbjct: 120 LTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAEDVHGYQWKFKHIFRGQPRRH 179
Query: 213 LLTSGWSVFVTSKKLVAGDVCIFLRGGDGELRVGVRRAMKLQNNASTSVISSLSMQHGIL 272
LLT+GWS FVTSK+LVAGD +FLRG +GELRVGVRRA Q++ +SVISS SM G+L
Sbjct: 180 LLTTGWSTFVTSKRLVAGDTFVFLRGENGELRVGVRRANLQQSSMPSSVISSHSMHLGVL 239
Query: 273 AGAFHAISTGTRFTVYYHPWTRPAEFLVPFSQYMKSAEIDYSIGTRFRMVFEGEECADQR 332
A A HA T T F VYY P R ++F++ ++Y+++ +S+G RF+M FEGE+ ++R
Sbjct: 240 ATARHATQTKTMFIVYYKP--RTSQFIISLNKYLEAMSNKFSVGMRFKMRFEGEDSPERR 297
Query: 333 IAGTVVGTEDVDHIRWPASEWRCLKVKWDATTDSITRPARVSPWNIEPIERTHKRPASVQ 392
+GTV+G +D W S+WRCL+V WD SI+RP +VSPW IEP + P SV
Sbjct: 298 YSGTVIGVKDCSP-HWKDSKWRCLEVHWDEPA-SISRPNKVSPWEIEPFVNSENVPKSVM 355
Query: 393 HQQKRLR 399
+ KR R
Sbjct: 356 LKNKRPR 362
Score = 279 (103.3 bits), Expect = 8.9e-128, Sum P(2) = 8.9e-128
Identities = 66/182 (36%), Positives = 98/182 (53%)
Query: 532 LKDENRTPLAQ--PNGGSRYMLFGVNLVNSPPELPSPQMATSNELESPCSVPPTSQSSIS 589
L D+ +P+ Q P + Y LFG++L++S +P + A + + S
Sbjct: 434 LNDQMVSPVEQKKPETTANYRLFGIDLMSSSLAVPEEKTAPMRPINISKPTMDSHSDPKS 493
Query: 590 ETIQVSEPSKS--VSGILSEKQCKNCYVSRSCTKVIKFGTALGRSVDLTRFHGYDELISE 647
E +VSE K G E Q K +RS TKV G +GR+VDL GY+ELI +
Sbjct: 494 EISKVSEEKKQEPAEGSPKEVQSKQSSSTRSRTKVQMQGVPVGRAVDLNALKGYNELIDD 553
Query: 648 LDQMFDFNGSLIDGNSGFHIAYMDDEGDMMLVGDNPWQDFQCAVRRMFICPKEDIDGVIP 707
++++FD G L N + I + DDEGDMMLVGD+PW +F V+R+FI KE++ + P
Sbjct: 554 IEKLFDIKGELRSRNQ-WEIVFTDDEGDMMLVGDDPWPEFCNMVKRIFIWSKEEVKKMTP 612
Query: 708 SS 709
+
Sbjct: 613 GN 614
>TAIR|locus:2039124 [details] [associations]
symbol:ARF11 "auxin response factor 11" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0009725 "response to hormone stimulus"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0009506 "plasmodesma" evidence=IDA]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 GO:GO:0009506
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009734
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 EMBL:AC006526 EMBL:AC006418
HOGENOM:HOG000241141 EMBL:AY669791 EMBL:AK229757 EMBL:BX837073
EMBL:AK229924 IPI:IPI00544804 IPI:IPI00547357 IPI:IPI00656718
PIR:A84904 RefSeq:NP_001031548.1 RefSeq:NP_182176.2
RefSeq:NP_973701.1 UniGene:At.36497 ProteinModelPortal:Q9ZPY6
SMR:Q9ZPY6 PRIDE:Q9ZPY6 EnsemblPlants:AT2G46530.3 GeneID:819264
KEGG:ath:AT2G46530 GeneFarm:3388 TAIR:At2g46530 eggNOG:NOG303653
InParanoid:Q9ZPY6 OMA:MFEIEGE PhylomeDB:Q9ZPY6
ProtClustDB:CLSN2681223 ArrayExpress:Q9ZPY6 Genevestigator:Q9ZPY6
Uniprot:Q9ZPY6
Length = 622
Score = 1009 (360.2 bits), Expect = 6.5e-123, Sum P(2) = 6.5e-123
Identities = 214/398 (53%), Positives = 274/398 (68%)
Query: 41 NELYNELWRACAGPLVYVPRVGDIVYYFLQGHMEQVEAYNSQD--DKAELPIYNLPPKIL 98
+ELY ELW+ACAGPLV VPR G+ V+YF QGHMEQ+ A +Q D+ E+P++NLPPKIL
Sbjct: 37 DELYTELWKACAGPLVEVPRYGERVFYFPQGHMEQLVASTNQGVVDQ-EIPVFNLPPKIL 95
Query: 99 CEVVYAQLKAEPGTDEVFAQITLLPRPEIDELSLEVGNSPPL--PPKLNVCSFSKKLTPS 156
C V+ LKAE TDEV+AQITL +PE D+ S PPL P K V SF K LT S
Sbjct: 96 CRVLSVTLKAEHETDEVYAQITL--QPEEDQ-SEPTSLDPPLVEPAKPTVDSFVKILTAS 152
Query: 157 DTSTHGGFSVPKRHADECLPPLDMSKDPPLQELVAKDLHGLEWRFRHIYRGQPKRHLLTS 216
DTSTHGGFSV ++HA ECLP LDM++ P QELVA+DLHG EWRF+HI+RGQP+RHLLT+
Sbjct: 153 DTSTHGGFSVLRKHATECLPSLDMTQPTPTQELVARDLHGYEWRFKHIFRGQPRRHLLTT 212
Query: 217 GWSVFVTSKKLVAGDVCIFLRGGDGELRVGVRRAMKLQNNASTSVISSLSMQHGILAGAF 276
GWS FVTSK+LVAGD +FLRG G+LRVGVRR K Q+ SVISS SM+ G+LA A
Sbjct: 213 GWSTFVTSKRLVAGDAFVFLRGETGDLRVGVRRLAKQQSTMPASVISSQSMRLGVLATAS 272
Query: 277 HAISTGTRFTVYYHPWTRPAEFLVPFSQYMKSAEIDYSIGTRFRMVFEGEECADQRIAGT 336
HA++T T F V+Y P R ++F++ ++YM + + +S+G R+RM FEGEE ++ GT
Sbjct: 273 HAVTTTTIFVVFYKP--RISQFIISVNKYMMAMKNGFSLGMRYRMRFEGEESPERIFTGT 330
Query: 337 VVGTEDVDHIRWPASEWRCLKVKWDATTDSITRPARVSPWNIEPIERTHKRPASVQHQQK 396
++G+ D+ +WPAS+WR L+++WD + SI RP +VSPW IEP + P Q Q K
Sbjct: 331 IIGSGDLSS-QWPASKWRSLQIQWDEPS-SIQRPNKVSPWEIEPFSPSALTPTPTQQQSK 388
Query: 397 --RLRPND--ASSPWFSSLFSNGVFQGQENRVTGVKAL 430
R RP SP SS S+ Q E+ + VK L
Sbjct: 389 SKRSRPISEITGSPVASSFLSS-FSQSHESNPS-VKLL 424
Score = 220 (82.5 bits), Expect = 6.5e-123, Sum P(2) = 6.5e-123
Identities = 59/153 (38%), Positives = 85/153 (55%)
Query: 551 LFGVNLVNSPPELPSPQMATSNELESPCSVPPTSQSSISE-TIQVSEPSKSVSGILSEKQ 609
LFG +L + P P +L SV S+IS+ T + +P+ S S K+
Sbjct: 458 LFGFDLTSKPASATIPH---DKQL---ISV----DSNISDSTTKCQDPNSSNS----PKE 503
Query: 610 CKNCYVSRSCTKVIKFGTALGRSVDLTRFHGYDELISELDQMFDFNGSLIDGNSGFHIAY 669
K +RS KV GTA+GR+VDLT YDELI EL++MF+ G L + + I +
Sbjct: 504 QKQQTSTRSRIKVQMQGTAVGRAVDLTLLRSYDELIKELEKMFEIEGELSPKDK-WAIVF 562
Query: 670 MDDEGDMMLVGDNPWQDFQCAVRRMFICPKEDI 702
DDEGD MLVGD+PW +F +++FI P +++
Sbjct: 563 TDDEGDRMLVGDDPWNEFCKMAKKLFIYPSDEV 595
Score = 49 (22.3 bits), Expect = 9.4e-15, Sum P(2) = 9.4e-15
Identities = 13/44 (29%), Positives = 21/44 (47%)
Query: 482 SLMSPGLSNHWPASPFAPYEVCETAAQSKNLSVPNAS-SENSGS 524
S+ P + W PF+P + T Q ++ S + SE +GS
Sbjct: 358 SIQRPNKVSPWEIEPFSPSALTPTPTQQQSKSKRSRPISEITGS 401
Score = 46 (21.3 bits), Expect = 1.9e-14, Sum P(2) = 1.9e-14
Identities = 18/89 (20%), Positives = 35/89 (39%)
Query: 415 GVFQGQENRVTGVKALGAAKTPLLPSLVRPPNPVWAQMQSGLENKLKFPMHDPFYMCLNR 474
GV + VT P + + N M++G +++ M R
Sbjct: 266 GVLATASHAVTTTTIFVVFYKPRISQFIISVNKYMMAMKNGFSLGMRYRMRFEGEESPER 325
Query: 475 MVSLPGGSLMSPG-LSNHWPASPFAPYEV 502
+ + G+++ G LS+ WPAS + ++
Sbjct: 326 IFT---GTIIGSGDLSSQWPASKWRSLQI 351
>TAIR|locus:2076765 [details] [associations]
symbol:ARF18 "auxin response factor 18" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0009725 "response
to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 EMBL:AL132959 HOGENOM:HOG000241141 EMBL:AF334717
EMBL:AY059746 EMBL:AY070463 EMBL:AY091392 EMBL:AK229945
IPI:IPI00524053 PIR:T47975 RefSeq:NP_567119.1 UniGene:At.17167
UniGene:At.69165 ProteinModelPortal:Q9C5W9 SMR:Q9C5W9 IntAct:Q9C5W9
EnsemblPlants:AT3G61830.1 GeneID:825356 KEGG:ath:AT3G61830
GeneFarm:3414 TAIR:At3g61830 eggNOG:NOG268528 InParanoid:Q9C5W9
OMA:RISQFIV PhylomeDB:Q9C5W9 ProtClustDB:CLSN2917487
Genevestigator:Q9C5W9 GermOnline:AT3G61830 Uniprot:Q9C5W9
Length = 602
Score = 980 (350.0 bits), Expect = 5.9e-120, Sum P(2) = 5.9e-120
Identities = 200/371 (53%), Positives = 260/371 (70%)
Query: 40 KNELYNELWRACAGPLVYVPRVGDIVYYFLQGHMEQVEAYNSQD-DKAELPIYNLPPKIL 98
+++LY ELW+ CAGPLV VPR + V+YF QGHMEQ+ A +Q + E+P+++LPPKIL
Sbjct: 19 QDQLYTELWKVCAGPLVEVPRAQERVFYFPQGHMEQLVASTNQGINSEEIPVFDLPPKIL 78
Query: 99 CEVVYAQLKAEPGTDEVFAQITLLPRPEIDELSLEVGNSPPL--PPKLNVCSFSKKLTPS 156
C V+ LKAE TDEV+AQITL +PE D+ S PP+ P K SF K LT S
Sbjct: 79 CRVLDVTLKAEHETDEVYAQITL--QPEEDQ-SEPTSLDPPIVGPTKQEFHSFVKILTAS 135
Query: 157 DTSTHGGFSVPKRHADECLPPLDMSKDPPLQELVAKDLHGLEWRFRHIYRGQPKRHLLTS 216
DTSTHGGFSV ++HA ECLP LDM++ P QELV +DLHG EWRF+HI+RGQP+RHLLT+
Sbjct: 136 DTSTHGGFSVLRKHATECLPSLDMTQATPTQELVTRDLHGFEWRFKHIFRGQPRRHLLTT 195
Query: 217 GWSVFVTSKKLVAGDVCIFLRGGDGELRVGVRRAMKLQNNASTSVISSLSMQHGILAGAF 276
GWS FV+SK+LVAGD +FLRG +G+LRVGVRR + Q+ TSVISS SM G+LA A
Sbjct: 196 GWSTFVSSKRLVAGDAFVFLRGENGDLRVGVRRLARHQSTMPTSVISSQSMHLGVLATAS 255
Query: 277 HAISTGTRFTVYYHPWTRPAEFLVPFSQYMKSAEIDYSIGTRFRMVFEGEECADQRIAGT 336
HA+ T T F V+Y P R ++F+V ++YM++ + +S+GTRFRM FEGEE ++ GT
Sbjct: 256 HAVRTTTIFVVFYKP--RISQFIVGVNKYMEAIKHGFSLGTRFRMRFEGEESPERIFTGT 313
Query: 337 VVGTEDVDHIRWPASEWRCLKVKWDATTDSITRPARVSPWNIEPIERTHKRPASVQHQQ- 395
+VG+ D+ +WPAS+WR L+V+WD T ++ RP +VSPW IEP T Q Q
Sbjct: 314 IVGSGDLSS-QWPASKWRSLQVQWDEPT-TVQRPDKVSPWEIEPFLATSPISTPAQQPQS 371
Query: 396 --KRLRPNDAS 404
KR RP + S
Sbjct: 372 KCKRSRPIEPS 382
Score = 221 (82.9 bits), Expect = 5.9e-120, Sum P(2) = 5.9e-120
Identities = 59/159 (37%), Positives = 81/159 (50%)
Query: 553 GVNLVNS-PPELPSPQMATSNEL-------ESPCSVPPTSQS-SISETIQVSEPSKSVSG 603
G + NS PE P P S L SP +P Q + EP S
Sbjct: 420 GYSSNNSFKPETPPPPTNCSYRLFGFDLTSNSPAPIPQDKQPMDTCGAAKCQEPITPTS- 478
Query: 604 ILSEKQCKNCYVSRSCTKVIKFGTALGRSVDLTRFHGYDELISELDQMFDFNGSLIDGNS 663
+SE+ K SRS TKV G A+GR+VDLT YDELI EL++MF+ G L+
Sbjct: 479 -MSEQ--KKQQTSRSRTKVQMQGIAVGRAVDLTLLKSYDELIDELEEMFEIQGQLL-ARD 534
Query: 664 GFHIAYMDDEGDMMLVGDNPWQDFQCAVRRMFICPKEDI 702
+ + + DDEGDMML GD+PW +F +++FI +++
Sbjct: 535 KWIVVFTDDEGDMMLAGDDPWNEFCKMAKKIFIYSSDEV 573
Score = 54 (24.1 bits), Expect = 2.5e-102, Sum P(2) = 2.5e-102
Identities = 16/47 (34%), Positives = 20/47 (42%)
Query: 543 PNGGSRYMLFGVNLV-NSPPELPSPQMATSNELESPCSVP--PTSQS 586
P Y LFG +L NSP +P + + C P PTS S
Sbjct: 434 PPTNCSYRLFGFDLTSNSPAPIPQDKQPMDTCGAAKCQEPITPTSMS 480
Score = 44 (20.5 bits), Expect = 2.1e-14, Sum P(2) = 2.1e-14
Identities = 9/23 (39%), Positives = 15/23 (65%)
Query: 481 GSLMSPG-LSNHWPASPFAPYEV 502
G+++ G LS+ WPAS + +V
Sbjct: 312 GTIVGSGDLSSQWPASKWRSLQV 334
>TAIR|locus:2026145 [details] [associations]
symbol:ARF12 "auxin response factor 12" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0009725 "response
to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 HOGENOM:HOG000241141 EMBL:AY669792 EMBL:AC007454
IPI:IPI00544760 PIR:C86467 RefSeq:NP_174691.2 UniGene:At.51185
ProteinModelPortal:Q9XID4 SMR:Q9XID4 IntAct:Q9XID4
EnsemblPlants:AT1G34310.1 GeneID:840331 KEGG:ath:AT1G34310
GeneFarm:3390 TAIR:At1g34310 eggNOG:NOG264447 PhylomeDB:Q9XID4
ProtClustDB:CLSN2681760 ArrayExpress:Q9XID4 Genevestigator:Q9XID4
GermOnline:AT1G34310 Uniprot:Q9XID4
Length = 593
Score = 881 (315.2 bits), Expect = 1.0e-109, Sum P(2) = 1.0e-109
Identities = 181/392 (46%), Positives = 251/392 (64%)
Query: 38 GGKNELYNELWRACAGPLVYVPRVGDIVYYFLQGHMEQVEAYNSQDDKAEL-PIYNLPPK 96
G K+ +Y +LW+ CAGPL +P++G+ VYYF QGH+E VE +++++ EL PI +LP K
Sbjct: 19 GSKSYVYEQLWKLCAGPLCDIPKLGEKVYYFPQGHIELVET-STREELNELQPICDLPSK 77
Query: 97 ILCEVVYAQLKAEPGTDEVFAQITLLPRPEIDELSLEVGNSPPLPPKLNVCSFSKKLTPS 156
+ C V+ LK E +DE +A+ITL+P + ++ + N P +N SF+K LT S
Sbjct: 78 LQCRVIAIHLKVENNSDETYAEITLMP--DTTQVVIPTQNENQFRPLVN--SFTKVLTAS 133
Query: 157 DTSTHGGFSVPKRHADECLPPLDMSKDPPLQELVAKDLHGLEWRFRHIYRGQPKRHLLTS 216
DTS HGGF VPK+HA ECLP LDMS+ P QEL+A DLHG +WRF H YRG P+RHLLT+
Sbjct: 134 DTSAHGGFFVPKKHAIECLPSLDMSQPLPAQELLAIDLHGNQWRFNHNYRGTPQRHLLTT 193
Query: 217 GWSVFVTSKKLVAGDVCIFLRGGDGELRVGVRRAMKLQNNASTSVISSLSMQHGILAGAF 276
GW+ F TSKKLVAGDV +F+RG GELRVG+RRA Q N +S++S M+HG++A A
Sbjct: 194 GWNAFTTSKKLVAGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVVASAK 253
Query: 277 HAISTGTRFTVYYHPWTRPAEFLVPFSQYMKSAEIDYSIGTRFRMVFEGEECADQRIAGT 336
HA FTV Y P R ++F+V + +++ + +++G+RF M EG++ +++R GT
Sbjct: 254 HAFDNQCMFTVVYKP--RSSKFIVSYDKFLDAVNNKFNVGSRFTMRLEGDDFSERRCFGT 311
Query: 337 VVGTEDVDHIRWPASEWRCLKVKWDATTDSITRPARVSPWNIEPIERTHKRPASVQHQQK 396
++G D W SEWR L+V+WD T S P +VSPW+IE + P S + K
Sbjct: 312 IIGVSDFSP-HWKCSEWRSLEVQWDEFT-SFPGPKKVSPWDIEHLMPAINVPRSFLLKNK 369
Query: 397 RLRP-NDASSPWFSSLFSNGVFQGQENRVTGV 427
RLR N+ S S L + QGQEN V
Sbjct: 370 RLREVNEIGSS-SSHLLPPILTQGQENEQLSV 400
Score = 223 (83.6 bits), Expect = 1.0e-109, Sum P(2) = 1.0e-109
Identities = 54/151 (35%), Positives = 88/151 (58%)
Query: 546 GSRYMLFGVNLVNSPPELPSPQMATSNELESPCSVPPTSQSSISETIQVSEPSKSVSGIL 605
G+ + LFGV L ++PP + P +E+ + + +S+T++ P++ +
Sbjct: 454 GTNFRLFGVTL-DTPPVIKDPIEEIGSEISK---LTEGKKFGLSQTLR--SPTE-----I 502
Query: 606 SEKQCKNCYVSRSCTKVIKFGTALGRSVDLTRFHGYDELISELDQMFDFNGSLIDGNSGF 665
KQ + SR+CTKV G +GR+VDL+ +GYD+LI EL+++FD G L N +
Sbjct: 503 QNKQFSS---SRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDIKGQLQTRNQ-W 558
Query: 666 HIAYMDDEGDMMLVGDNPWQDFQCAVRRMFI 696
IA+ D + D MLVGD+PW +F V+++FI
Sbjct: 559 EIAFTDSDEDKMLVGDDPWPEFCNMVKKIFI 589
>TAIR|locus:2014731 [details] [associations]
symbol:ARF14 "auxin response factor 14" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 HOGENOM:HOG000241141 eggNOG:NOG264447
ProtClustDB:CLSN2681760 EMBL:AC007887 IPI:IPI00548517 PIR:G86476
RefSeq:NP_174786.1 UniGene:At.39556 ProteinModelPortal:Q9LQE8
SMR:Q9LQE8 IntAct:Q9LQE8 PRIDE:Q9LQE8 EnsemblPlants:AT1G35540.1
GeneID:840450 KEGG:ath:AT1G35540 GeneFarm:3394 TAIR:At1g35540
OMA:DITEDAM PhylomeDB:Q9LQE8 Genevestigator:Q9LQE8 Uniprot:Q9LQE8
Length = 605
Score = 878 (314.1 bits), Expect = 6.4e-108, Sum P(2) = 6.4e-108
Identities = 181/386 (46%), Positives = 249/386 (64%)
Query: 38 GGKNELYNELWRACAGPLVYVPRVGDIVYYFLQGHMEQVEAYNSQDDKAEL-PIYNLPPK 96
G K+ +Y +LW+ CAGPL +P++G+ VYYF QGH+E VEA +++++ EL PI + P K
Sbjct: 19 GSKSYMYEQLWKLCAGPLCDIPKLGEKVYYFPQGHIELVEA-STREELNELQPICDFPSK 77
Query: 97 ILCEVVYAQLKAEPGTDEVFAQITLLPRPEIDELSLEVGNSPPLPPKLNVCSFSKKLTPS 156
+ C V+ QLK E +DE +A+ITL+P + ++ + N P +N SF+K LT S
Sbjct: 78 LQCRVIAIQLKVENNSDETYAEITLMP--DTTQVVIPTQNQNQFRPLVN--SFTKVLTAS 133
Query: 157 DTSTHGGFSVPKRHADECLPPLDMSKDPPLQELVAKDLHGLEWRFRHIYRGQPKRHLLTS 216
DTS HGGFSVPK+HA ECLPPLDMS+ P QE++A DLHG +WRFRHIYRG +RHLLT
Sbjct: 134 DTSVHGGFSVPKKHAIECLPPLDMSQPLPTQEILAIDLHGNQWRFRHIYRGTAQRHLLTI 193
Query: 217 GWSVFVTSKKLVAGDVCIFLRGGDGELRVGVRRAMKLQNNASTSVISSLSMQHGILAGAF 276
GW+ F TSKKLV GDV +F+RG GELRVG+RRA Q N +S++S SM+HGI+A A
Sbjct: 194 GWNAFTTSKKLVEGDVIVFVRGETGELRVGIRRAGHQQGNIPSSIVSIESMRHGIIASAK 253
Query: 277 HAISTGTRFTVYYHPWTRPAEFLVPFSQYMKSAEIDYSIGTRFRMVFEGEECADQRIAGT 336
HA F V Y P R ++F+V + +++ +++G+RF M FEG++ +++R GT
Sbjct: 254 HAFDNQCMFIVVYKP--RSSQFIVSYDKFLDVVNNKFNVGSRFTMRFEGDDFSERRSFGT 311
Query: 337 VVGTEDVDHIRWPASEWRCLKVKWDATTDSITRPARVSPWNIEPIERTHKRPASVQHQQK 396
++G D W SEWR L+V+WD S RP +VSPW+IE + S + K
Sbjct: 312 IIGVSDFSP-HWKCSEWRSLEVQWDEFA-SFPRPNQVSPWDIEHLTPWSNVSRSSFLKNK 369
Query: 397 RLRP-NDASSPWFSSLFSNGVFQGQE 421
R R N+ S S L + QGQE
Sbjct: 370 RSREVNEIGSS-SSHLLPPTLTQGQE 394
Score = 209 (78.6 bits), Expect = 6.4e-108, Sum P(2) = 6.4e-108
Identities = 50/133 (37%), Positives = 77/133 (57%)
Query: 574 LESPCSVP-PTSQSSISETIQVSEPSKSVSGIL---SEKQCKNCYVSRSCTKVIKFGTAL 629
L +P + P Q + + E S IL +E Q K +R+CTKV G +
Sbjct: 463 LATPSVIKDPVEQIGLEISRLTQEKKFGQSQILRSPTEIQSKQFSSTRTCTKVQMQGVTI 522
Query: 630 GRSVDLTRFHGYDELISELDQMFDFNGSLIDGNSGFHIAYMDDEGDMMLVGDNPWQDFQC 689
GR+VDL+ +GYD+LI EL+++FD G L N + IA+ ++E D MLVG++PW +F
Sbjct: 523 GRAVDLSVLNGYDQLILELEKLFDLKGQLQARNQ-WEIAFTNNEEDKMLVGEDPWPEFCN 581
Query: 690 AVRRMFICPKEDI 702
V+++FI KE++
Sbjct: 582 MVKKIFIYSKEEV 594
>TAIR|locus:2175098 [details] [associations]
symbol:ARF4 "auxin response factor 4" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0009725 "response to hormone stimulus"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0010158 "abaxial
cell fate specification" evidence=IGI] [GO:0010050 "vegetative
phase change" evidence=IGI] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003311 InterPro:IPR003340
InterPro:IPR010525 InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362
Pfam:PF06507 PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009734
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 EMBL:AB011483 GO:GO:0010050
HOGENOM:HOG000241141 GO:GO:0010158 EMBL:AF013466 EMBL:AF344313
EMBL:AY080832 EMBL:AY113977 IPI:IPI00525857 RefSeq:NP_200853.1
UniGene:At.6797 ProteinModelPortal:Q9ZTX9 SMR:Q9ZTX9 IntAct:Q9ZTX9
STRING:Q9ZTX9 PaxDb:Q9ZTX9 PRIDE:Q9ZTX9 EnsemblPlants:AT5G60450.1
GeneID:836166 KEGG:ath:AT5G60450 GeneFarm:3367 TAIR:At5g60450
eggNOG:NOG277773 InParanoid:Q9ZTX9 OMA:RILYTDS PhylomeDB:Q9ZTX9
ProtClustDB:CLSN2686689 Genevestigator:Q9ZTX9 GermOnline:AT5G60450
Uniprot:Q9ZTX9
Length = 788
Score = 858 (307.1 bits), Expect = 2.1e-107, Sum P(2) = 2.1e-107
Identities = 176/377 (46%), Positives = 236/377 (62%)
Query: 35 AEAGGKNELYNELWRACAGPLVYVPRVGDIVYYFLQGHMEQVEAYNSQDDKAELPIYNLP 94
+ G + +Y+ELW ACAGPL +P+ G++V YF QGH+EQ +A S E+P ++L
Sbjct: 54 SSTGSASSIYSELWHACAGPLTCLPKKGNVVVYFPQGHLEQ-DAMVSYSSPLEIPKFDLN 112
Query: 95 PKILCEVVYAQLKAEPGTDEVFAQITLLPRPE----------IDELSLEVGNSPPLPPKL 144
P+I+C VV QL A TDEV+ Q+TLLP E + EL E + K
Sbjct: 113 PQIVCRVVNVQLLANKDTDEVYTQVTLLPLQEFSMLNGEGKEVKELGGEEERNGSSSVKR 172
Query: 145 NVCSFSKKLTPSDTSTHGGFSVPKRHADECLPPLDMSKDPPLQELVAKDLHGLEWRFRHI 204
F K LT SDTSTHGGFSVP+R A++C PLD + P QEL+AKDLHG+EW+FRHI
Sbjct: 173 TPHMFCKTLTASDTSTHGGFSVPRRAAEDCFAPLDYKQQRPSQELIAKDLHGVEWKFRHI 232
Query: 205 YRGQPKRHLLTSGWSVFVTSKKLVAGDVCIFLRGGDGELRVGVRRAMKLQNNASTSVISS 264
YRGQP+RHLLT+GWS+FV+ K LV+GD +FLR GELR+G+RRA + +N S+I
Sbjct: 233 YRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRDEGGELRLGIRRAARPRNGLPDSIIEK 292
Query: 265 LSMQHGILAGAFHAISTGTRFTVYYHPWTRPAEFLVPFSQYMKSAEIDYSIGTRFRMVFE 324
S + IL+ +A+ST + F V+Y P AEF++P+ +Y+ S IGTRFRM FE
Sbjct: 293 NSCSN-ILSLVANAVSTKSMFHVFYSPRATHAEFVIPYEKYITSIRSPVCIGTRFRMRFE 351
Query: 325 GEECADQRIAGTVVGTEDVDHIRWPASEWRCLKVKWDATTDSITRPARVSPWNIEP-IER 383
++ ++R AG V G D+D RWP S+WRCL V+WD + S RVSPW I+P +
Sbjct: 352 MDDSPERRCAGVVTGVCDLDPYRWPNSKWRCLLVRWDESFVS-DHQERVSPWEIDPSVSL 410
Query: 384 THKRPASVQHQQKRLRP 400
H S+Q + RP
Sbjct: 411 PH---LSIQSSPRPKRP 424
Score = 224 (83.9 bits), Expect = 2.1e-107, Sum P(2) = 2.1e-107
Identities = 40/87 (45%), Positives = 61/87 (70%)
Query: 617 RSCTKVIKFGTALGRSVDLTRFHGYDELISELDQMFDFNGSLIDGNSGFHIAYMDDEGDM 676
R CTKV K G+ +GR++DL+R +GYD+L+ EL+++F+ G L D G+ I Y D E DM
Sbjct: 665 RICTKVHKQGSQVGRAIDLSRLNGYDDLLMELERLFNMEGLLRDPEKGWRILYTDSENDM 724
Query: 677 MLVGDNPWQDFQCAVRRMFICPKEDID 703
M+VGD+PW DF V ++ + KE+++
Sbjct: 725 MVVGDDPWHDFCNVVWKIHLYTKEEVE 751
Score = 39 (18.8 bits), Expect = 7.2e-88, Sum P(2) = 7.2e-88
Identities = 8/32 (25%), Positives = 15/32 (46%)
Query: 438 LPSLVRPPNPVWAQMQSGLENKLKFPMHDPFY 469
+ L+R P W + + EN + DP++
Sbjct: 702 MEGLLRDPEKGWRILYTDSENDMMVVGDDPWH 733
>TAIR|locus:2009298 [details] [associations]
symbol:ARF21 "auxin response factor 21" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 HOGENOM:HOG000241141 eggNOG:NOG264447
ProtClustDB:CLSN2681760 EMBL:AC023279 EMBL:AC023913 IPI:IPI00539451
PIR:E86468 RefSeq:NP_174701.2 UniGene:At.51930
ProteinModelPortal:Q9C8N9 SMR:Q9C8N9 EnsemblPlants:AT1G34410.1
GeneID:840344 KEGG:ath:AT1G34410 GeneFarm:3425 TAIR:At1g34410
PhylomeDB:Q9C8N9 Genevestigator:Q9C8N9 GermOnline:AT1G34410
Uniprot:Q9C8N9
Length = 606
Score = 860 (307.8 bits), Expect = 3.5e-107, Sum P(2) = 3.5e-107
Identities = 173/385 (44%), Positives = 250/385 (64%)
Query: 38 GGKNELYNELWRACAGPLVYVPRVGDIVYYFLQGHMEQVEAYNSQDDKAEL-PIYNLPPK 96
G K+ +Y +LW+ CAGPL +P++G+ VYYF QG++E V+A +++++ EL PI +LP K
Sbjct: 19 GSKSYMYEQLWKLCAGPLCDIPKLGENVYYFPQGNIELVQA-STREELNELQPICDLPSK 77
Query: 97 ILCEVVYAQLKAEPGTDEVFAQITLLPRPEIDELSLEVGNSPPLPPKLNVCSFSKKLTPS 156
+ C V+ LK E +DE++A+ITL+P + ++ + + P +N SF+K LT S
Sbjct: 78 LQCRVIAIHLKVENNSDEIYAEITLMP--DTTQVVIPTQSENRFRPLVN--SFTKVLTAS 133
Query: 157 DTSTHGGFSVPKRHADECLPPLDMSKDPPLQELVAKDLHGLEWRFRHIYRGQPKRHLLTS 216
DTS +GGFSVPK+HA ECLPPLDMS+ P QE++A DLH +WRFRH YRG P+RH LT+
Sbjct: 134 DTSAYGGFSVPKKHAIECLPPLDMSQPLPAQEILAIDLHDNQWRFRHNYRGTPQRHSLTT 193
Query: 217 GWSVFVTSKKLVAGDVCIFLRGGDGELRVGVRRAMKLQNNASTSVISSLSMQHGILAGAF 276
GW+ F+TSKKLV GDV +F+RG GELRVG+RRA Q N +S++S M+HG++A A
Sbjct: 194 GWNEFITSKKLVKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVIASAK 253
Query: 277 HAISTGTRFTVYYHPWTRPAEFLVPFSQYMKSAEIDYSIGTRFRMVFEGEECADQRIAGT 336
HA F V Y P R ++F+V + +++ + +++G+RF M FEG++ +++R GT
Sbjct: 254 HAFDNQCIFIVVYKP--RSSQFIVSYDKFLDAVNNKFNVGSRFTMRFEGDDFSERRYFGT 311
Query: 337 VVGTEDVDHIRWPASEWRCLKVKWDATTDSITRPARVSPWNIEPIERTHKRPASVQHQQK 396
++G D W SEWR L+V+WD S +RP +VSPW IE + P S + K
Sbjct: 312 IIGVSDFSP-HWKCSEWRSLEVQWDEFA-SFSRPNKVSPWEIEHLVPALNVPRSSLLKNK 369
Query: 397 RLRPNDASSPWFSSLFSNGVFQGQE 421
RLR + S L + QGQE
Sbjct: 370 RLREVNEFGSSSSHLLPPILTQGQE 394
Score = 220 (82.5 bits), Expect = 3.5e-107, Sum P(2) = 3.5e-107
Identities = 56/157 (35%), Positives = 87/157 (55%)
Query: 546 GSRYMLFGVNLVNSPPELPSPQMATSNELESPCSVPPTSQSSISETIQVSEPSKSVSGIL 605
G+ + LFGV L ++PP + P +++ S ++E + + S I
Sbjct: 454 GTNFRLFGVTL-DTPPMIKDPIKQIGSDI-----------SKLTERKKFGQSQTLRSPI- 500
Query: 606 SEKQCKNCYVSRSCTKVIKFGTALGRSVDLTRFHGYDELISELDQMFDFNGSLIDGNSGF 665
E Q K SR+CTKV G +GR+VDL+ +GYD+LI EL+++FD G L N +
Sbjct: 501 -EIQSKQFSSSRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDIKGQLQTRNQ-W 558
Query: 666 HIAYMDDEGDMMLVGDNPWQDFQCAVRRMFICPKEDI 702
IA+ D +G MLVGD+PW +F V+++ I KE++
Sbjct: 559 KIAFTDSDGYEMLVGDDPWPEFCKMVKKILIYSKEEV 595
>TAIR|locus:2036288 [details] [associations]
symbol:ARF22 "auxin response factor 22" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 HOGENOM:HOG000241141 ProtClustDB:CLSN2681760
EMBL:AC023913 EMBL:AY669796 IPI:IPI00545778 PIR:C86468
RefSeq:NP_174699.2 UniGene:At.51186 ProteinModelPortal:Q9C8N7
SMR:Q9C8N7 IntAct:Q9C8N7 EnsemblPlants:AT1G34390.1 GeneID:840341
KEGG:ath:AT1G34390 GeneFarm:3426 TAIR:At1g34390 OMA:NITTNAN
PhylomeDB:Q9C8N7 Genevestigator:Q9C8N7 Uniprot:Q9C8N7
Length = 598
Score = 868 (310.6 bits), Expect = 6.5e-106, Sum P(2) = 6.5e-106
Identities = 180/386 (46%), Positives = 251/386 (65%)
Query: 38 GGKNELYNELWRACAGPLVYVPRVGDIVYYFLQGHMEQVEAYNSQDDKAEL-PIYNLPPK 96
G K+ +Y +LW+ CAGPL +P++G+ +YYF QG++E VEA +++++ EL PI +LP K
Sbjct: 19 GSKSYMYEQLWKLCAGPLCDIPKLGEKIYYFPQGNIELVEA-STREELNELKPICDLPSK 77
Query: 97 ILCEVVYAQLKAEPGTDEVFAQITLLPRPEIDELSLEVGNSPPLPPKLNVCSFSKKLTPS 156
+ C V+ QLK E +DE +A+ITL+P + ++ + N P +N SF+K LT S
Sbjct: 78 LQCRVIAIQLKVENNSDETYAEITLMP--DTTQVVIPTQNENQFRPLVN--SFTKVLTAS 133
Query: 157 DTSTHGGFSVPKRHADECLPPLDMSKDPPLQELVAKDLHGLEWRFRHIYRGQPKRHLLTS 216
DTS GGF VPK+HA ECLPPLDMS+ P QEL+A DLHG +WRF H YRG P+RHLLT+
Sbjct: 134 DTS--GGFFVPKKHAIECLPPLDMSQPLPTQELLATDLHGNQWRFNHNYRGTPQRHLLTT 191
Query: 217 GWSVFVTSKKLVAGDVCIFLRGGDGELRVGVRRAMKLQNNASTSVISSLSMQHGILAGAF 276
GW+ F TSKKLVAGDV +F+RG GELRVG+RRA Q N +S+IS SM+HG++A A
Sbjct: 192 GWNAFTTSKKLVAGDVIVFVRGETGELRVGIRRAGHQQGNIPSSIISIESMRHGVIASAK 251
Query: 277 HAISTGTRFTVYYHPWTRPAEFLVPFSQYMKSAEIDYSIGTRFRMVFEGEECADQRIAGT 336
HA F V Y P R ++F+V + +++ + +++G+RF M FEG++ +++R GT
Sbjct: 252 HAFDNQCMFIVVYKP--RSSQFIVSYDKFLDAVNNKFNVGSRFTMRFEGDDFSERRYFGT 309
Query: 337 VVGTEDVDHIRWPASEWRCLKVKWDATTDSITRPARVSPWNIEPIERTHKRPASVQHQQK 396
++G D W SEWR L+V+WD S +RP +VSPW IE + P + K
Sbjct: 310 IIGVSDFSP-HWKCSEWRNLEVQWDEFA-SFSRPNKVSPWEIEHLMPALNVPRPSLLKNK 367
Query: 397 RLRP-NDASSPWFSSLFSNGVFQGQE 421
RLR N+ S S L + QGQE
Sbjct: 368 RLREVNEIGSS-SSHLLPPILTQGQE 392
Score = 200 (75.5 bits), Expect = 6.5e-106, Sum P(2) = 6.5e-106
Identities = 52/151 (34%), Positives = 84/151 (55%)
Query: 546 GSRYMLFGVNLVNSPPELPSPQMATSNELESPCSVPPTSQSSISETIQVSEPSKSVSGIL 605
G+ + LFGV+LV +P + P +E+ QS +T++ P++ +
Sbjct: 452 GTNFRLFGVSLV-TPSVIKDPIEEIGSEISKLTEGKKFGQS---QTLR--SPTE-----I 500
Query: 606 SEKQCKNCYVSRSCTKVIKFGTALGRSVDLTRFHGYDELISELDQMFDFNGSLIDGNSGF 665
KQ + +R+CTKV G + R+VDL+ +GYD+LI EL+++FD G L N +
Sbjct: 501 QSKQFSS---TRTCTKVQMQGVTIERAVDLSVLNGYDQLILELEELFDLKGQLQTRNQ-W 556
Query: 666 HIAYMDDEGDMMLVGDNPWQDFQCAVRRMFI 696
IA+ D + D MLVGD+PW +F V+++ I
Sbjct: 557 EIAFTDSDDDKMLVGDDPWPEFCNMVKKILI 587
>TAIR|locus:2202205 [details] [associations]
symbol:ARF19 "auxin response factor 19" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA;IDA;TAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0009725 "response to hormone
stimulus" evidence=IEA] [GO:0009733 "response to auxin stimulus"
evidence=RCA;IMP;NAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0048366 "leaf
development" evidence=IGI] [GO:0048527 "lateral root development"
evidence=IGI;RCA] [GO:0009723 "response to ethylene stimulus"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IDA] [GO:0010311
"lateral root formation" evidence=IGI] [GO:0007155 "cell adhesion"
evidence=RCA] [GO:0009741 "response to brassinosteroid stimulus"
evidence=RCA] [GO:0010090 "trichome morphogenesis" evidence=RCA]
[GO:0010583 "response to cyclopentenone" evidence=RCA] [GO:0045010
"actin nucleation" evidence=RCA] [GO:0048765 "root hair cell
differentiation" evidence=RCA] [GO:0071555 "cell wall organization"
evidence=RCA] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0046983 "protein dimerization activity"
evidence=IDA] InterPro:IPR003311 InterPro:IPR003340
InterPro:IPR010525 InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362
Pfam:PF06507 PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0009723 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0046983 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0010311 GO:GO:0048366 HOGENOM:HOG000241141
EMBL:U53672 EMBL:AY008390 EMBL:AY669794 EMBL:AC069143 EMBL:AB493467
EMBL:AJ441312 IPI:IPI00534870 PIR:G86325 RefSeq:NP_173356.1
UniGene:At.10488 ProteinModelPortal:Q8RYC8 SMR:Q8RYC8 IntAct:Q8RYC8
STRING:Q8RYC8 EnsemblPlants:AT1G19220.1 GeneID:838505
KEGG:ath:AT1G19220 GeneFarm:3421 TAIR:At1g19220 eggNOG:NOG331338
InParanoid:Q8RYC8 OMA:WEIEPVI PhylomeDB:Q8RYC8
ProtClustDB:CLSN2914206 Genevestigator:Q8RYC8 GermOnline:AT1G19220
Uniprot:Q8RYC8
Length = 1086
Score = 858 (307.1 bits), Expect = 3.5e-105, Sum P(3) = 3.5e-105
Identities = 176/348 (50%), Positives = 230/348 (66%)
Query: 38 GGKNELYNELWRACAGPLVYVPRVGDIVYYFLQGHMEQVEAYNSQDDKAELPIY-NLPPK 96
G K + ++LW ACAGPLV +P VG +V YF QGH EQV A + Q +P Y NLP K
Sbjct: 15 GEKKPINSQLWHACAGPLVSLPPVGSLVVYFPQGHSEQVAA-SMQKQTDFIPNYPNLPSK 73
Query: 97 ILCEVVYAQLKAEPGTDEVFAQITLLPRPEIDELSLEVGNSPPLPPKLN---VCSFSKKL 153
++C + L A+ TDEV+AQ+TL P + D +L + + KLN F K L
Sbjct: 74 LICLLHSVTLHADTETDEVYAQMTLQPVNKYDREALLASD---MGLKLNRQPTEFFCKTL 130
Query: 154 TPSDTSTHGGFSVPKRHADECLPPLDMSKDPPLQELVAKDLHGLEWRFRHIYRGQPKRHL 213
T SDTSTHGGFSVP+R A++ PPLD S PP QE+VAKDLH W FRHIYRGQPKRHL
Sbjct: 131 TASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVAKDLHDTTWTFRHIYRGQPKRHL 190
Query: 214 LTSGWSVFVTSKKLVAGDVCIFLRGGDGELRVGVRRAMKLQNNASTSVISSLSMQHGILA 273
LT+GWSVFV++K+L AGD +F+R +L +G+RRA + S+SVISS SM GILA
Sbjct: 191 LTTGWSVFVSTKRLFAGDSVLFVRDEKSQLMLGIRRANRQTPTLSSSVISSDSMHIGILA 250
Query: 274 GAFHAISTGTRFTVYYHPWTRPAEFLVPFSQYMKSAEIDYSIGTRFRMVFEGEECADQRI 333
A HA + + FT++++P P+EF+VP ++Y K+ S+G RFRM+FE E+C +R
Sbjct: 251 AAAHANANSSPFTIFFNPRASPSEFVVPLAKYNKALYAQVSLGMRFRMMFETEDCGVRRY 310
Query: 334 AGTVVGTEDVDHIRWPASEWRCLKVKWDATTDSITRPARVSPWNIEPI 381
GTV G D+D +RW S+WR L+V WD +T RP+RVS W IEP+
Sbjct: 311 MGTVTGISDLDPVRWKGSQWRNLQVGWDESTAG-DRPSRVSIWEIEPV 357
Score = 176 (67.0 bits), Expect = 3.5e-105, Sum P(3) = 3.5e-105
Identities = 37/87 (42%), Positives = 56/87 (64%)
Query: 617 RSCTKVIKFGTALGRSVDLTRFHGYDELISELDQMFDFNGSLIDG-NSGFHIAYMDDEGD 675
R+ TKV K G+ +GRS+D+TR+ GYDEL +L +MF G L D S + + Y D E D
Sbjct: 958 RTYTKVQKRGS-VGRSIDVTRYSGYDELRHDLARMFGIEGQLEDPLTSDWKLVYTDHEND 1016
Query: 676 MMLVGDNPWQDFQCAVRRMFICPKEDI 702
++LVGD+PW++F V+ + I ++
Sbjct: 1017 ILLVGDDPWEEFVNCVQNIKILSSVEV 1043
Score = 42 (19.8 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 17/73 (23%), Positives = 28/73 (38%)
Query: 141 PPKLNVCSFSKKLTPSDTSTHGGFS-VPKRHADECLPPLDMSKDPPLQELVAKDLHGLEW 199
P +L + S K +PS + ++ + +PP+ S P L L H L+
Sbjct: 628 PQQLQMQQQSSKPSPSQQLQLQLLQKLQQQQQQQSIPPVSSSLQPQLSALQQTQSHQLQ- 686
Query: 200 RFRHIYRGQPKRH 212
+ QP H
Sbjct: 687 QLLSSQNQQPLAH 699
Score = 41 (19.5 bits), Expect = 3.5e-105, Sum P(3) = 3.5e-105
Identities = 8/37 (21%), Positives = 21/37 (56%)
Query: 363 TTDSITRPARVSPWNIEPIERTHKRPASVQHQQKRLR 399
T + I++ + P ++ ++ ++ QHQQ++L+
Sbjct: 477 TVNHISQQMQAQPAMVKSQQQQQQQQQQHQHQQQQLQ 513
>TAIR|locus:2204237 [details] [associations]
symbol:ARF6 "auxin response factor 6" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0009725 "response to hormone stimulus"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009733 "response
to auxin stimulus" evidence=IMP] [GO:0009908 "flower development"
evidence=IGI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009855 "determination of bilateral symmetry" evidence=RCA]
[GO:0009886 "post-embryonic morphogenesis" evidence=RCA]
[GO:0009887 "organ morphogenesis" evidence=RCA] [GO:0009909
"regulation of flower development" evidence=RCA] [GO:0010014
"meristem initiation" evidence=RCA] [GO:0010051 "xylem and phloem
pattern formation" evidence=RCA] [GO:0010073 "meristem maintenance"
evidence=RCA] [GO:0048439 "flower morphogenesis" evidence=RCA]
[GO:0048481 "ovule development" evidence=RCA] [GO:0048507 "meristem
development" evidence=RCA] [GO:0048519 "negative regulation of
biological process" evidence=RCA] InterPro:IPR003311
InterPro:IPR003340 InterPro:IPR010525 InterPro:IPR011525
Pfam:PF02309 Pfam:PF02362 Pfam:PF06507 PROSITE:PS50863
PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009733 GO:GO:0009734
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC025295
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
GO:GO:0009908 HOGENOM:HOG000241141 EMBL:AF013467 EMBL:AY669788
EMBL:EU550049 EMBL:EU550050 EMBL:EU550051 EMBL:EU550052
EMBL:EU550053 EMBL:EU550054 EMBL:EU550055 EMBL:EU550056
EMBL:EU550057 EMBL:EU550058 EMBL:EU550059 EMBL:EU550060
EMBL:EU550061 EMBL:EU550062 EMBL:EU550063 EMBL:EU550064
EMBL:EU550065 EMBL:EU550066 EMBL:EU550067 EMBL:EU550068
EMBL:EU550069 EMBL:EU550070 EMBL:EU550071 EMBL:EU550072
IPI:IPI00533211 IPI:IPI00656643 PIR:F86427 RefSeq:NP_001031115.1
RefSeq:NP_174323.1 UniGene:At.21939 ProteinModelPortal:Q9ZTX8
SMR:Q9ZTX8 IntAct:Q9ZTX8 STRING:Q9ZTX8 PaxDb:Q9ZTX8 PRIDE:Q9ZTX8
EnsemblPlants:AT1G30330.2 GeneID:839913 KEGG:ath:AT1G30330
GeneFarm:3369 TAIR:At1g30330 eggNOG:NOG288258 InParanoid:Q9ZTX8
OMA:ANSHWRS PhylomeDB:Q9ZTX8 ProtClustDB:CLSN2686713
Genevestigator:Q9ZTX8 GermOnline:AT1G30330 Uniprot:Q9ZTX8
Length = 935
Score = 857 (306.7 bits), Expect = 2.2e-103, Sum P(2) = 2.2e-103
Identities = 179/377 (47%), Positives = 245/377 (64%)
Query: 33 KPAEAGGKNELYN-ELWRACAGPLVYVPRVGDIVYYFLQGHMEQVEAYNSQDDKAELPIY 91
+P E G+ + N ELW ACAGPLV +P VG V YF QGH EQV A +++ A +P Y
Sbjct: 11 QPHEVTGEKRVLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNY 70
Query: 92 -NLPPKILCEVVYAQLKAEPGTDEVFAQITLLPRPEIDELSLEVGNSPPLPPKLNVCS-- 148
+L P+++C++ + A+ TDEV+AQ+TL P L+ + P LP +L V S
Sbjct: 71 PSLHPQLICQLHNVTMHADVETDEVYAQMTLQP------LNAQEQKDPYLPAELGVPSRQ 124
Query: 149 ----FSKKLTPSDTSTHGGFSVPKRHADECLPPLDMSKDPPLQELVAKDLHGLEWRFRHI 204
F K LT SDTSTHGGFSVP+R A++ PPLD S+ PP QEL+A+DLH EW+FRHI
Sbjct: 125 PTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELMARDLHDNEWKFRHI 184
Query: 205 YRGQPKRHLLTSGWSVFVTSKKLVAGDVCIFLRGGDGELRVGVRRAMKLQNNASTSVISS 264
+RGQPKRHLLT+GWSVFV++K+LVAGD +F+ +L +G+RRA + Q +SV+SS
Sbjct: 185 FRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNDKNQLLLGIRRANRPQTVMPSSVLSS 244
Query: 265 LSMQHGILAGAFHAISTGTRFTVYYHPWTRPAEFLVPFSQYMKSA-EIDYSIGTRFRMVF 323
SM G+LA A HA +T +RFT++Y+P P+EF++P ++Y+K+ S+G RFRM+F
Sbjct: 245 DSMHLGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLF 304
Query: 324 EGEECADQRIAGTVVGTEDVDHIRWPASEWRCLKVKWDATTDSITRPARVSPWNIEPIER 383
E EE + +R GT+ G D+D RW S WR +KV WD +T +P RVS W IEP+
Sbjct: 305 ETEESSVRRYMGTITGICDLDPTRWANSHWRSVKVGWDESTAGERQP-RVSLWEIEPLTT 363
Query: 384 THKRPASVQHQQKRLRP 400
P+ + KR P
Sbjct: 364 FPMYPSPFPLRLKRPWP 380
Score = 187 (70.9 bits), Expect = 2.2e-103, Sum P(2) = 2.2e-103
Identities = 67/204 (32%), Positives = 103/204 (50%)
Query: 502 VCETAAQSKNLSVP-NASS--ENSGSQMCMALELKDENRTPLAQPNGGSRYMLFGVNLVN 558
V E QS +VP NA S G + C ++ E + P+ ++LFGVN+ +
Sbjct: 676 VLEQLGQSHTSNVPPNAVSLPPFPGGREC---SIEQEGSA--SDPHS---HLLFGVNIDS 727
Query: 559 SPPELPSPQM-ATSNELESPCS--VPPTSQS---SISETIQVSEPSKSV--SGIL--SEK 608
S +P+ S +E S +P TS + S + ++ PS + SG L SE
Sbjct: 728 SSLLMPNGMSNLRSIGIEGGDSTTLPFTSSNFNNDFSGNLAMTTPSSCIDESGFLQSSEN 787
Query: 609 QCKNCYVSRSCTKVIKFGTALGRSVDLTRFHGYDELISELDQMFDFNGSLIDG-NSGFHI 667
S + KV K G+ GRS+D+++F Y EL SEL +MF G L D SG+ +
Sbjct: 788 LGSENPQSNTFVKVYKSGS-FGRSLDISKFSSYHELRSELARMFGLEGQLEDPVRSGWQL 846
Query: 668 AYMDDEGDMMLVGDNPWQDFQCAV 691
++D E D++L+GD+PW +F +V
Sbjct: 847 VFVDRENDVLLLGDDPWPEFVSSV 870
Score = 47 (21.6 bits), Expect = 1.3e-88, Sum P(2) = 1.3e-88
Identities = 14/49 (28%), Positives = 21/49 (42%)
Query: 488 LSNHWPASPFAPYEVCETAAQSKNLSVPNASSENSGSQMCMALELKDEN 536
+ NH P++ A V +Q + S PN S S + +C D N
Sbjct: 567 VDNHNPSASSAA--VVSAMSQFGSASQPNTSPLQSMTSLCHQQSFSDTN 613
>TAIR|locus:2152642 [details] [associations]
symbol:ARF8 "auxin response factor 8" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS;TAS]
[GO:0009733 "response to auxin stimulus" evidence=IMP] [GO:0009908
"flower development" evidence=IGI] [GO:0009855 "determination of
bilateral symmetry" evidence=RCA] [GO:0009886 "post-embryonic
morphogenesis" evidence=RCA] [GO:0009887 "organ morphogenesis"
evidence=RCA] [GO:0009909 "regulation of flower development"
evidence=RCA] [GO:0010051 "xylem and phloem pattern formation"
evidence=RCA] [GO:0048439 "flower morphogenesis" evidence=RCA]
[GO:0048481 "ovule development" evidence=RCA] [GO:0048507 "meristem
development" evidence=RCA] [GO:0048519 "negative regulation of
biological process" evidence=RCA] InterPro:IPR003311
InterPro:IPR003340 InterPro:IPR010525 InterPro:IPR011525
Pfam:PF02309 Pfam:PF02362 Pfam:PF06507 PROSITE:PS50863
PROSITE:PS50962 SMART:SM01019 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009733 GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0009908 HOGENOM:HOG000241141
ProtClustDB:CLSN2686713 EMBL:AF042196 EMBL:AY669790 EMBL:AB024026
IPI:IPI00525703 IPI:IPI00846789 RefSeq:NP_001078672.1
RefSeq:NP_198518.1 UniGene:At.23446 ProteinModelPortal:Q9FGV1
SMR:Q9FGV1 IntAct:Q9FGV1 STRING:Q9FGV1 PaxDb:Q9FGV1 PRIDE:Q9FGV1
EnsemblPlants:AT5G37020.1 GeneID:833672 KEGG:ath:AT5G37020
GeneFarm:3372 TAIR:At5g37020 eggNOG:NOG292968 InParanoid:Q9FGV1
OMA:NDAYLPA PhylomeDB:Q9FGV1 Genevestigator:Q9FGV1
GermOnline:AT5G37020 Uniprot:Q9FGV1
Length = 811
Score = 857 (306.7 bits), Expect = 2.8e-103, Sum P(2) = 2.8e-103
Identities = 188/426 (44%), Positives = 264/426 (61%)
Query: 39 GKNELYNELWRACAGPLVYVPRVGDIVYYFLQGHMEQVEAYNSQDDKAELPIY-NLPPKI 97
G+ L +ELW ACAGPLV +P G V YF QGH EQV A +++ +P Y +LPP++
Sbjct: 15 GEKCLNSELWHACAGPLVSLPSSGSRVVYFPQGHSEQVAATTNKEVDGHIPNYPSLPPQL 74
Query: 98 LCEVVYAQLKAEPGTDEVFAQITLLP-RPEIDE---LSLEVGNSPPLPPKLNVCSFSKKL 153
+C++ + A+ TDEV+AQ+TL P PE + + +E+G +P K F K L
Sbjct: 75 ICQLHNVTMHADVETDEVYAQMTLQPLTPEEQKETFVPIELG----IPSKQPSNYFCKTL 130
Query: 154 TPSDTSTHGGFSVPKRHADECLPPLDMSKDPPLQELVAKDLHGLEWRFRHIYRGQPKRHL 213
T SDTSTHGGFSVP+R A++ PPLD + PP QEL+A+DLH +EW+FRHI+RGQPKRHL
Sbjct: 131 TASDTSTHGGFSVPRRAAEKVFPPLDYTLQPPAQELIARDLHDVEWKFRHIFRGQPKRHL 190
Query: 214 LTSGWSVFVTSKKLVAGDVCIFLRGGDGELRVGVRRAMKLQNNASTSVISSLSMQHGILA 273
LT+GWSVFV++K+LVAGD IF+R +L +G+R A + Q +SV+SS SM G+LA
Sbjct: 191 LTTGWSVFVSAKRLVAGDSVIFIRNEKNQLFLGIRHATRPQTIVPSSVLSSDSMHIGLLA 250
Query: 274 GAFHAISTGTRFTVYYHPWTRPAEFLVPFSQYMKSA-EIDYSIGTRFRMVFEGEECADQR 332
A HA +T + FTV++HP +EF++ S+Y+K+ S+G RFRM+FE EE + +R
Sbjct: 251 AAAHASATNSCFTVFFHPRASQSEFVIQLSKYIKAVFHTRISVGMRFRMLFETEESSVRR 310
Query: 333 IAGTVVGTEDVDHIRWPASEWRCLKVKWDATTDSITRPARVSPWNIEPIERTHKRPASVQ 392
GT+ G D+D +RWP S WR +KV WD +T +P RVS W IEP+ P+
Sbjct: 311 YMGTITGISDLDSVRWPNSHWRSVKVGWDESTAGERQP-RVSLWEIEPLTTFPMYPSLFP 369
Query: 393 HQQKRLRPNDASSPWFSSLFSNGVFQGQ-ENRVTGVKALGAAKTPLLPSLVRPPNPVWAQ 451
+ KR PW + S +G + +T ++ G + LLP L P ++
Sbjct: 370 LRLKR--------PWHAGTSSLPDGRGDLGSGLTWLRGGGGEQQGLLP-LNYPSVGLFPW 420
Query: 452 MQSGLE 457
MQ L+
Sbjct: 421 MQQRLD 426
Score = 186 (70.5 bits), Expect = 2.8e-103, Sum P(2) = 2.8e-103
Identities = 61/169 (36%), Positives = 91/169 (53%)
Query: 542 QPNGGSRYMLFGVNLVNSPPELPS--PQMATSN-ELE-SPCSVPPTS-QSSISETIQ--V 594
+P LFGV+ +S LPS P+ A+S+ + E SP S+ + Q+S+ +Q
Sbjct: 630 EPGNPQNPSLFGVD-PDSGLFLPSTVPRFASSSGDAEASPMSLTDSGFQNSLYSCMQDTT 688
Query: 595 SEPSKSVSGILSEKQCKNCYVSRSCTKVIKFGTALGRSVDLTRFHGYDELISELDQMFDF 654
E I S Q KN +V KV K G+ +GRS+D++RF Y EL EL +MF
Sbjct: 689 HELLHGAGQINSSNQTKN-FV-----KVYKSGS-VGRSLDISRFSSYHELREELGKMFAI 741
Query: 655 NGSLIDG-NSGFHIAYMDDEGDMMLVGDNPWQDFQCAVRRMFICPKEDI 702
G L D SG+ + ++D E D++L+GD+PW+ F V + I ED+
Sbjct: 742 EGLLEDPLRSGWQLVFVDKENDILLLGDDPWESFVNNVWYIKILSPEDV 790
>TAIR|locus:2206717 [details] [associations]
symbol:ARF20 "auxin response factor 20" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 EMBL:AC069160 HOGENOM:HOG000241141
eggNOG:NOG264447 ProtClustDB:CLSN2681760 EMBL:AY669795
IPI:IPI00656906 PIR:D86473 RefSeq:NP_174758.2 UniGene:At.51187
ProteinModelPortal:Q9C7I9 SMR:Q9C7I9 IntAct:Q9C7I9 PaxDb:Q9C7I9
PRIDE:Q9C7I9 EnsemblPlants:AT1G35240.1 GeneID:840413
KEGG:ath:AT1G35240 GeneFarm:3424 TAIR:At1g35240 PhylomeDB:Q9C7I9
Genevestigator:Q9C7I9 GermOnline:AT1G35240 Uniprot:Q9C7I9
Length = 590
Score = 839 (300.4 bits), Expect = 4.6e-103, Sum P(2) = 4.6e-103
Identities = 166/363 (45%), Positives = 238/363 (65%)
Query: 38 GGKNELYNELWRACAGPLVYVPRVGDIVYYFLQGHMEQVEAYNSQDDKAEL-PIYNLPPK 96
G K+ +Y +LW+ CAGPL +P++G+ VYYF QG++E V+A +++++ EL PI +LP K
Sbjct: 19 GSKSYMYEQLWKLCAGPLCDIPKLGENVYYFPQGNIELVDA-STREELNELQPICDLPSK 77
Query: 97 ILCEVVYAQLKAEPGTDEVFAQITLLPRPEIDELSLEVGNSPPLPPKLNVCSFSKKLTPS 156
+ C V+ LK E +DE +A+ITL+P + ++ + + P +N SF+K LT S
Sbjct: 78 LQCRVIAIHLKVENNSDETYAEITLMP--DTTQVVIPTQSENQFRPLVN--SFTKVLTAS 133
Query: 157 DTSTHGGFSVPKRHADECLPPLDMSKDPPLQELVAKDLHGLEWRFRHIYRGQPKRHLLTS 216
DTS +GGF VPK+HA ECLPPL + P QEL+AKDLHG +WRFRH YRG P+RH LT+
Sbjct: 134 DTSAYGGFFVPKKHAIECLPPLPL----PAQELLAKDLHGNQWRFRHSYRGTPQRHSLTT 189
Query: 217 GWSVFVTSKKLVAGDVCIFLRGGDGELRVGVRRAMKLQNNASTSVISSLSMQHGILAGAF 276
GW+ F TSKKLV GDV +F+RG GELRVG+RRA Q N +S++S M+HG++A A
Sbjct: 190 GWNEFTTSKKLVKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVIASAK 249
Query: 277 HAISTGTRFTVYYHPWTRPAEFLVPFSQYMKSAEIDYSIGTRFRMVFEGEECADQRIAGT 336
HA+ F V Y P R ++F+V + +++ + + +G+RF M FEG++ +++R GT
Sbjct: 250 HALDNQCIFIVVYKPSIRSSQFIVSYDKFLDAMNNKFIVGSRFTMRFEGDDFSERRYFGT 309
Query: 337 VVGTEDVDHIRWPASEWRCLKVKWDATTDSITRPARVSPWNIEPIERTHKRPASVQHQQK 396
++G D W SEWR L+V+WD S +RP +VSPW IE + P S + K
Sbjct: 310 IIGVNDFSP-HWKCSEWRSLEVQWDEFA-SFSRPNKVSPWEIEHLMSALNVPRSSLLKNK 367
Query: 397 RLR 399
RLR
Sbjct: 368 RLR 370
Score = 202 (76.2 bits), Expect = 4.6e-103, Sum P(2) = 4.6e-103
Identities = 42/96 (43%), Positives = 62/96 (64%)
Query: 607 EKQCKNCYVSRSCTKVIKFGTALGRSVDLTRFHGYDELISELDQMFDFNGSLIDGNSGFH 666
E Q K +R+CTKV G +GR+VDL+ +GYD+LI EL+++FD G L N +
Sbjct: 485 EIQSKQFGSTRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDLKGQLQTRNQ-WK 543
Query: 667 IAYMDDEGDMMLVGDNPWQDFQCAVRRMFICPKEDI 702
IA+ D +G MLVGD+PW +F V+++ I KE++
Sbjct: 544 IAFTDSDGYEMLVGDDPWPEFCKMVKKILIYSKEEV 579
Score = 42 (19.8 bits), Expect = 3.9e-12, Sum P(2) = 3.9e-12
Identities = 9/29 (31%), Positives = 14/29 (48%)
Query: 21 RKHMDDALPTKHKPAEAGGKNELYNELWR 49
+KH + LP PA+ +L+ WR
Sbjct: 145 KKHAIECLPPLPLPAQELLAKDLHGNQWR 173
>TAIR|locus:2035454 [details] [associations]
symbol:MP "MONOPTEROS" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA;ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;IEP]
[GO:0009725 "response to hormone stimulus" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS;TAS] [GO:0009733 "response to auxin
stimulus" evidence=IEP;RCA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0042802 "identical protein binding" evidence=IPI]
[GO:0016020 "membrane" evidence=IDA] [GO:0009790 "embryo
development" evidence=IGI] [GO:0009908 "flower development"
evidence=IGI] [GO:0010305 "leaf vascular tissue pattern formation"
evidence=IGI] [GO:0048364 "root development" evidence=IGI]
[GO:0048507 "meristem development" evidence=IGI;RCA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IDA]
[GO:0006346 "methylation-dependent chromatin silencing"
evidence=RCA] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0009741
"response to brassinosteroid stimulus" evidence=RCA] [GO:0009855
"determination of bilateral symmetry" evidence=RCA] [GO:0009886
"post-embryonic morphogenesis" evidence=RCA] [GO:0009887 "organ
morphogenesis" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009944 "polarity specification of
adaxial/abaxial axis" evidence=RCA] [GO:0009965 "leaf
morphogenesis" evidence=RCA] [GO:0010014 "meristem initiation"
evidence=RCA] [GO:0010051 "xylem and phloem pattern formation"
evidence=IMP;RCA] [GO:0010073 "meristem maintenance" evidence=RCA]
[GO:0010090 "trichome morphogenesis" evidence=RCA] [GO:0016246 "RNA
interference" evidence=RCA] [GO:0031048 "chromatin silencing by
small RNA" evidence=RCA] [GO:0045010 "actin nucleation"
evidence=RCA] [GO:0048439 "flower morphogenesis" evidence=RCA]
[GO:0048481 "ovule development" evidence=RCA] [GO:0048519 "negative
regulation of biological process" evidence=RCA] [GO:0048527
"lateral root development" evidence=RCA] [GO:0048765 "root hair
cell differentiation" evidence=RCA] [GO:0051567 "histone H3-K9
methylation" evidence=RCA] [GO:0071555 "cell wall organization"
evidence=RCA] [GO:0009942 "longitudinal axis specification"
evidence=IMP] InterPro:IPR003311 InterPro:IPR003340
InterPro:IPR010525 InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362
Pfam:PF06507 PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0016020 GO:GO:0003700 GO:GO:0006351
GO:GO:0048364 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0044212 GO:GO:0009908 GO:GO:0048507
EMBL:AC007797 KO:K14486 EMBL:AF037228 EMBL:AF037229 EMBL:AF334716
EMBL:BT002050 EMBL:BT008805 EMBL:AB199792 EMBL:U79557 EMBL:EF598523
EMBL:EF598524 EMBL:EF598525 EMBL:EF598526 EMBL:EF598527
EMBL:EF598528 EMBL:EF598529 EMBL:EF598530 EMBL:EF598531
EMBL:EF598532 EMBL:EF598533 EMBL:EF598534 EMBL:EF598535
EMBL:EF598536 EMBL:EF598537 EMBL:EF598538 EMBL:EF598539
EMBL:EF598540 EMBL:EF598541 EMBL:EF598542 EMBL:EF598543
EMBL:EF598544 EMBL:EF598545 EMBL:EF598546 IPI:IPI00538603
PIR:G86331 PIR:T51807 RefSeq:NP_173414.1 UniGene:At.10494
UniGene:At.41731 ProteinModelPortal:P93024 SMR:P93024 IntAct:P93024
STRING:P93024 PaxDb:P93024 PRIDE:P93024 EnsemblPlants:AT1G19850.1
GeneID:838573 KEGG:ath:AT1G19850 GeneFarm:3368 TAIR:At1g19850
eggNOG:NOG291711 InParanoid:P93024 OMA:ARYNKAT PhylomeDB:P93024
ProtClustDB:CLSN2682929 Genevestigator:P93024 GermOnline:AT1G19850
GO:GO:0010305 GO:GO:0009942 Uniprot:P93024
Length = 902
Score = 837 (299.7 bits), Expect = 4.7e-99, Sum P(2) = 4.7e-99
Identities = 181/423 (42%), Positives = 256/423 (60%)
Query: 36 EAGGKNELYN-ELWRACAGPLVYVPRVGDIVYYFLQGHMEQVEAYNSQDDKAELPIY-NL 93
++G + + N ELW ACAGPLV +P+VG +VYYF QGH EQV + ++P Y NL
Sbjct: 43 QSGTRKPVINSELWHACAGPLVCLPQVGSLVYYFSQGHSEQVAVSTRRSATTQVPNYPNL 102
Query: 94 PPKILCEVVYAQLKAEPGTDEVFAQITLLP-RPEIDELSL-EVG--NSPPLPPKLNVCSF 149
P +++C+V L A+ +DE++AQ++L P E D + + G P + F
Sbjct: 103 PSQLMCQVHNVTLHADKDSDEIYAQMSLQPVHSERDVFPVPDFGMLRGSKHPTEF----F 158
Query: 150 SKKLTPSDTSTHGGFSVPKRHADECLPPLDMSKDPPLQELVAKDLHGLEWRFRHIYRGQP 209
K LT SDTSTHGGFSVP+R A++ PPLD S PP QELV +DLH W FRHIYRGQP
Sbjct: 159 CKTLTASDTSTHGGFSVPRRAAEKLFPPLDYSAQPPTQELVVRDLHENTWTFRHIYRGQP 218
Query: 210 KRHLLTSGWSVFVTSKKLVAGDVCIFLRGGDGELRVGVRRAMKLQNNASTSVISSLSMQH 269
KRHLLT+GWS+FV SK+L AGD +F+R +L VGVRRA + Q +SV+S+ SM
Sbjct: 219 KRHLLTTGWSLFVGSKRLRAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHI 278
Query: 270 GILAGAFHAISTGTRFTVYYHPWTRPAEFLVPFSQYMKS-AEIDYSIGTRFRMVFEGEEC 328
G+LA A HA + T F ++Y+P PAEF++P ++Y K+ S+G RF M+FE E+
Sbjct: 279 GVLAAAAHATANRTPFLIFYNPRACPAEFVIPLAKYRKAICGSQLSVGMRFGMMFETEDS 338
Query: 329 ADQRIAGTVVGTEDVDHIRWPASEWRCLKVKWDATTDSITRPARVSPWNIEPIERTHKRP 388
+R GT+VG D+D +RWP S+WR L+V+WD + +P RVSPW+IE E P
Sbjct: 339 GKRRYMGTIVGISDLDPLRWPGSKWRNLQVEWDEPGCN-DKPTRVSPWDIETPESLFIFP 397
Query: 389 ASVQHQQKRLRPND-ASSPWFSSLFSNGVFQGQENRVTGVKALGA----AKTPLLPSLVR 443
+ +++L P+ A + SL + + ++ G+ + A L+ ++R
Sbjct: 398 SLTSGLKRQLHPSYFAGETEWGSLIKRPLIRVPDS-ANGIMPYASFPSMASEQLMKMMMR 456
Query: 444 PPN 446
P N
Sbjct: 457 PHN 459
Score = 166 (63.5 bits), Expect = 4.7e-99, Sum P(2) = 4.7e-99
Identities = 37/86 (43%), Positives = 56/86 (65%)
Query: 617 RSCTKVIKFGTALGRSVDLTRFHGYDELISELDQMFDFNGSLIDG-NSGFHIAYMDDEGD 675
R+ TKV K G+ +GRS+D+T F Y+EL S ++ MF G L +SG+ + Y+D E D
Sbjct: 793 RTYTKVQKTGS-VGRSIDVTSFKDYEELKSAIECMFGLEGLLTHPQSSGWKLVYVDYESD 851
Query: 676 MMLVGDNPWQDFQCAVRRM-FICPKE 700
++LVGD+PW++F VR + + P E
Sbjct: 852 VLLVGDDPWEEFVGCVRCIRILSPTE 877
>TAIR|locus:2008991 [details] [associations]
symbol:ARF13 "AUXIN RESPONSE FACTOR 13" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006863 "purine nucleobase transport" evidence=RCA]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GO:GO:0005634 GO:GO:0009734 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 IPI:IPI00938986 RefSeq:NP_001154393.1
UniGene:At.51184 ProteinModelPortal:F4HT52 SMR:F4HT52 PRIDE:F4HT52
EnsemblPlants:AT1G34170.3 GeneID:840316 KEGG:ath:AT1G34170
OMA:PEFCNMA ArrayExpress:F4HT52 Uniprot:F4HT52
Length = 546
Score = 594 (214.2 bits), Expect = 5.4e-91, Sum P(3) = 5.4e-91
Identities = 121/256 (47%), Positives = 163/256 (63%)
Query: 40 KNELYNELWRACAGPLVYVPRVGDIVYYFLQGHMEQVEAYNSQDDKAE--LPIYNLPPKI 97
K +Y +LW CAGPL +P+ G+ VYYF QGH+E +E NS D+ + PI++LP K+
Sbjct: 19 KTYMYEKLWNICAGPLCVLPKPGEKVYYFPQGHIELIE--NSTRDELDHIRPIFDLPSKL 76
Query: 98 LCEVVYAQLKAEPGTDEVFAQITLLPRPEIDELSLEVGNSPPLPPKLNVCSFSKKLTPSD 157
C VV K + TDEV+AQI+L+P D + N+ + V FSK LT SD
Sbjct: 77 RCRVVAIDRKVDKNTDEVYAQISLMP----DTTEVMTHNTTMDTRRPIVYFFSKILTASD 132
Query: 158 TSTHGGFSVPKRHADECLPPLDMSKDPPLQELVAKDLHGLEWRFRHIYRGQPKRHLLTSG 217
S GG +PK++A EC PPLDMS+ Q LVAKDL+G EW F+H++RG P+RH+ TSG
Sbjct: 133 VSLSGGLIIPKQYAIECFPPLDMSQPISTQNLVAKDLYGQEWSFKHVFRGTPQRHMFTSG 192
Query: 218 --WSVFVTSKKLVAGDVCIFLRGGDGELRVGVRRAMKLQNNASTSVISSLSMQHGILAGA 275
WSVF T+K+L+ GD+ + LRG +GELR G+RRA Q + +SVIS+ MQHG++A
Sbjct: 193 GGWSVFATTKRLIVGDIFVLLRGENGELRFGIRRAKHQQGHIPSSVISANCMQHGVIASV 252
Query: 276 FHAISTGTRFTVYYHP 291
+A T F V Y P
Sbjct: 253 VNAFKTKCMFNVVYKP 268
Score = 195 (73.7 bits), Expect = 5.4e-91, Sum P(3) = 5.4e-91
Identities = 43/110 (39%), Positives = 63/110 (57%)
Query: 593 QVSEPSKSVSGILSEKQCKNCYVSRSCTKVIKFGTALGRSVDLTRFHGYDELISELDQMF 652
Q+ +P K I +E TKV G A+ R+VDLT HGY++LI +L+++F
Sbjct: 411 QMIQPRKE--DITTEATTSCLLFGVDLTKVHMQGVAISRAVDLTAMHGYNQLIQKLEELF 468
Query: 653 DFNGSLIDGNSGFHIAYMDDEGDMMLVGDNPWQDFQCAVRRMFICPKEDI 702
D L N + I + ++EG MLVGD+PW +F +R+FIC KE+I
Sbjct: 469 DLKDELRTRNQ-WEIVFTNNEGAEMLVGDDPWPEFCNMAKRIFICSKEEI 517
Score = 151 (58.2 bits), Expect = 5.4e-91, Sum P(3) = 5.4e-91
Identities = 34/95 (35%), Positives = 59/95 (62%)
Query: 320 RMVFEGEECADQRIAGTVVGTEDVDHIRWPASEWRCLKVKWDATTDSITRPARVSPWNIE 379
RM FEG++ +++R GT++G D+ W SEWR LKV+WD + + RP +VSPW+IE
Sbjct: 269 RMQFEGKDFSEKRYDGTIIGVNDMSP-HWKDSEWRSLKVQWDELSPFL-RPNQVSPWDIE 326
Query: 380 P-IERTHKRPASVQHQQKRLRPNDASSPWFSSLFS 413
I + +S++ ++ L+ N+ + S+L++
Sbjct: 327 HLIPSSDISQSSLKKKKHWLQLNEIGAT-LSNLWT 360
Score = 43 (20.2 bits), Expect = 7.0e-23, Sum P(3) = 7.0e-23
Identities = 14/57 (24%), Positives = 25/57 (43%)
Query: 5 GEEGKASGSRRMAAHHRKHMDDALPTKHKPAEAGGKNELYNELWRACAGPLVYVPRV 61
GE G+ R A H + H+ ++ + + + G + N C +VY PR+
Sbjct: 215 GENGELRFGIRRAKHQQGHIPSSVISANC-MQHGVIASVVNAFKTKCMFNVVYKPRM 270
>TAIR|locus:2057609 [details] [associations]
symbol:ETT "ETTIN" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0009725 "response to hormone
stimulus" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;TAS] [GO:0009850 "auxin
metabolic process" evidence=TAS] [GO:0010158 "abaxial cell fate
specification" evidence=IGI] [GO:0010050 "vegetative phase change"
evidence=IGI;RCA;IMP] [GO:0007389 "pattern specification process"
evidence=RCA] [GO:0009616 "virus induced gene silencing"
evidence=RCA] [GO:0009855 "determination of bilateral symmetry"
evidence=RCA] [GO:0009887 "organ morphogenesis" evidence=RCA]
[GO:0010051 "xylem and phloem pattern formation" evidence=RCA]
[GO:0048438 "floral whorl development" evidence=RCA] [GO:0048439
"flower morphogenesis" evidence=RCA] [GO:0048519 "negative
regulation of biological process" evidence=RCA] [GO:0009733
"response to auxin stimulus" evidence=ISS] InterPro:IPR003340
InterPro:IPR010525 Pfam:PF02362 Pfam:PF06507 PROSITE:PS50863
SMART:SM01019 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0009733 GO:GO:0009734 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0009850 GO:GO:0010050 HOGENOM:HOG000241141
KO:K14486 EMBL:U89296 EMBL:AF007788 EMBL:U78721 EMBL:AF336917
EMBL:AF360313 EMBL:AY056365 EMBL:AB199791 IPI:IPI00527337
PIR:E84750 PIR:T03278 RefSeq:NP_180942.1 UniGene:At.10360
ProteinModelPortal:O23661 SMR:O23661 IntAct:O23661 STRING:O23661
EnsemblPlants:AT2G33860.1 GeneID:817956 KEGG:ath:AT2G33860
GeneFarm:3366 TAIR:At2g33860 eggNOG:NOG315820 InParanoid:O23661
OMA:HESNNES PhylomeDB:O23661 ProtClustDB:CLSN2913114
Genevestigator:O23661 GermOnline:AT2G33860 GO:GO:0010158
Uniprot:O23661
Length = 608
Score = 827 (296.2 bits), Expect = 1.7e-82, P = 1.7e-82
Identities = 162/344 (47%), Positives = 221/344 (64%)
Query: 46 ELWRACAGPLVYVPRVGDIVYYFLQGHMEQVEAYNSQDDKAELPIYNLPPKILCEVVYAQ 105
ELW ACAGPL+ +P+ G +V YF QGH+EQ +++ IY LPP + C ++ +
Sbjct: 54 ELWHACAGPLISLPKRGSLVLYFPQGHLEQAPDFSAA-------IYGLPPHVFCRILDVK 106
Query: 106 LKAEPGTDEVFAQITLLPRPEIDELSLEVG--------NSPPLPPKLNVCS-FSKKLTPS 156
L AE TDEV+AQ++LLP E E + G + + N F K LT S
Sbjct: 107 LHAETTTDEVYAQVSLLPESEDIERKVREGIIDVDGGEEDYEVLKRSNTPHMFCKTLTAS 166
Query: 157 DTSTHGGFSVPKRHADECLPPLDMSKDPPLQELVAKDLHGLEWRFRHIYRGQPKRHLLTS 216
DTSTHGGFSVP+R A++C PPLD S+ P QEL+A+DLHGLEWRFRHIYRGQP+RHLLT+
Sbjct: 167 DTSTHGGFSVPRRAAEDCFPPLDYSQPRPSQELLARDLHGLEWRFRHIYRGQPRRHLLTT 226
Query: 217 GWSVFVTSKKLVAGDVCIFLRGGDGELRVGVRRAMKLQNNASTSVISSLSMQHGILAGAF 276
GWS FV KKLV+GD +FLRG DG+LR+GVRRA +++ A+ S + +M H +
Sbjct: 227 GWSAFVNKKKLVSGDAVLFLRGDDGKLRLGVRRASQIEGTAALSAQYNQNMNHNNFSEVA 286
Query: 277 HAISTGTRFTVYYHPWTRPAEFLVPFSQYMKSAEIDYSIGTRFRMVFEGEECADQRIAGT 336
HAIST + F++ Y+P + F++P +++K + + IG RF+ E E+ +++R G
Sbjct: 287 HAISTHSVFSISYNPKASWSNFIIPAPKFLKVVDYPFCIGMRFKARVESEDASERRSPGI 346
Query: 337 VVGTEDVDHIRWPASEWRCLKVKWDATTDSITRPARVSPWNIEP 380
+ G D+D IRWP S+WRCL V+WD + RVSPW IEP
Sbjct: 347 ISGISDLDPIRWPGSKWRCLLVRWDDIVAN-GHQQRVSPWEIEP 389
>TAIR|locus:2057517 [details] [associations]
symbol:ARF10 "auxin response factor 10" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0035198 "miRNA binding" evidence=ISS] [GO:0007389 "pattern
specification process" evidence=IDA] [GO:0048829 "root cap
development" evidence=IGI;IMP] [GO:0051301 "cell division"
evidence=IGI] [GO:0009734 "auxin mediated signaling pathway"
evidence=IMP] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=IMP] [GO:0009743 "response to carbohydrate
stimulus" evidence=IMP] [GO:0010154 "fruit development"
evidence=IMP] [GO:0031540 "regulation of anthocyanin biosynthetic
process" evidence=IMP] [GO:0048366 "leaf development" evidence=IMP]
[GO:0048441 "petal development" evidence=IMP] [GO:0048442 "sepal
development" evidence=IMP] [GO:0048589 "developmental growth"
evidence=IMP] InterPro:IPR003311 InterPro:IPR003340
InterPro:IPR010525 InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362
Pfam:PF06507 PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009738
GO:GO:0009734 GO:GO:0051301 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0048829 GO:GO:0048589 GO:GO:0009743
GO:GO:0048441 GO:GO:0048442 GO:GO:0010154 GO:GO:0035198
GO:GO:0048366 GO:GO:0007389 EMBL:AF099735 EMBL:AC006283
EMBL:AF325073 EMBL:AF336919 EMBL:EU550097 EMBL:EU550098
EMBL:EU550099 EMBL:EU550100 EMBL:EU550101 EMBL:EU550102
EMBL:EU550103 EMBL:EU550104 EMBL:EU550105 EMBL:EU550106
EMBL:EU550107 EMBL:EU550108 EMBL:EU550109 EMBL:EU550110
EMBL:EU550111 EMBL:EU550112 EMBL:EU550113 EMBL:EU550114
EMBL:EU550115 EMBL:EU550116 EMBL:EU550117 EMBL:EU550118
EMBL:EU550119 EMBL:AK228534 IPI:IPI00530405 PIR:G84683
RefSeq:NP_180402.1 UniGene:At.13730 ProteinModelPortal:Q9SKN5
SMR:Q9SKN5 IntAct:Q9SKN5 STRING:Q9SKN5 PRIDE:Q9SKN5
EnsemblPlants:AT2G28350.1 GeneID:817382 KEGG:ath:AT2G28350
GeneFarm:3383 TAIR:At2g28350 eggNOG:NOG315592 InParanoid:Q9SKN5
OMA:ERESGRC PhylomeDB:Q9SKN5 ProtClustDB:CLSN2913131
ArrayExpress:Q9SKN5 Genevestigator:Q9SKN5 GermOnline:AT2G28350
GO:GO:0031540 Uniprot:Q9SKN5
Length = 693
Score = 504 (182.5 bits), Expect = 3.6e-76, Sum P(4) = 3.6e-76
Identities = 111/225 (49%), Positives = 141/225 (62%)
Query: 46 ELWRACAGPLVYVPRVGDIVYYFLQGHMEQVEAYNSQDDKAELPIYNLPPKILCEVVYAQ 105
+LW ACAG +V +P + V+YF QGH E A D A P +PP ILC VV +
Sbjct: 10 QLWHACAGSMVQIPSLNSTVFYFAQGHTEHAHA--PPDFHA--P--RVPPLILCRVVSVK 63
Query: 106 LKAEPGTDEVFAQITLLPRPEIDELSLE----VGNSPPLPP-----KLNVCSFSKKLTPS 156
A+ TDEVFA+ITLLP P D L LE +G +PP K SF+K LT S
Sbjct: 64 FLADAETDEVFAKITLLPLPGND-LDLENDAVLGLTPPSSDGNGNGKEKPASFAKTLTQS 122
Query: 157 DTSTHGGFSVPKRHADECLPPLDMSKDPPLQELVAKDLHGLEWRFRHIYRGQPKRHLLTS 216
D + GGFSVP+ A+ P LD S +PP+Q ++AKD+HG W+FRHIYRG P+RHLLT+
Sbjct: 123 DANNGGGFSVPRYCAETIFPRLDYSAEPPVQTVIAKDIHGETWKFRHIYRGTPRRHLLTT 182
Query: 217 GWSVFVTSKKLVAGDVCIFLRGGDGELRVGVRRAMK--LQNNAST 259
GWS FV KKL+AGD +FLR G+L VG+RRA + L +NA +
Sbjct: 183 GWSTFVNQKKLIAGDSIVFLRSESGDLCVGIRRAKRGGLGSNAGS 227
Score = 187 (70.9 bits), Expect = 3.6e-76, Sum P(4) = 3.6e-76
Identities = 54/182 (29%), Positives = 80/182 (43%)
Query: 235 FLRGGDGELRVGVRRAMKLQNNASTSVISSLSMQHGILAGAFHAISTGTRFTVYYHPWTR 294
FLR + MK N + ++ ++ +A A + G F V Y+P
Sbjct: 237 FLRDDESTTTTSKLMMMKRNGNNDGNAAATGRVRVEAVAEAVARAACGQAFEVVYYPRAS 296
Query: 295 PAEFLVPFSQYMKSAEIDYSIGTRFRMVFEGEECADQRIA---GTVVGTEDVDHIRWPAS 351
EF V + + I + G RF+M FE E+ + RI+ GTV + D IRWP S
Sbjct: 297 TPEFCVKAADVRSAMRIRWCSGMRFKMAFETEDSS--RISWFMGTVSAVQVADPIRWPNS 354
Query: 352 EWRCLKVKWDATTDSITRPARVSPWNIEPIERTHKRPASVQHQQKRLR-PNDASSPWFSS 410
WR L+V WD D + RVSPW +E + S +K++R P P+ +
Sbjct: 355 PWRLLQVAWDEP-DLLQNVKRVSPWLVELVSNMPTIHLSPFSPRKKIRIPQPFEFPFHGT 413
Query: 411 LF 412
F
Sbjct: 414 KF 415
Score = 106 (42.4 bits), Expect = 3.6e-76, Sum P(4) = 3.6e-76
Identities = 30/86 (34%), Positives = 43/86 (50%)
Query: 621 KVIKFGTALGRSVDLTRFHGYDELISELDQMFDFNGSLIDGNSGF--HIAYMDDEGDMML 678
KV +GR++DL+ Y EL +L +MF I+ S H+ Y D G +
Sbjct: 584 KVFMESEDVGRTLDLSVIGSYQELYRKLAEMFH-----IEERSDLLTHVVYRDANGVIKR 638
Query: 679 VGDNPWQDFQCAVRRMFICPKEDIDG 704
+GD P+ DF A +R+ I K DI G
Sbjct: 639 IGDEPFSDFMKATKRLTI--KMDIGG 662
Score = 46 (21.3 bits), Expect = 3.6e-76, Sum P(4) = 3.6e-76
Identities = 15/63 (23%), Positives = 21/63 (33%)
Query: 515 PNASSENSGSQMCMALELKDENRTPLAQPNGGSRYMLFGVNLVNSPPELPSPQMATSNEL 574
P ++ G MC D N P LFG + +L +N+L
Sbjct: 420 PGFANNGGGESMCYLSN--DNNNAPAGIQGARQAQQLFGSPSPSLLSDLNLSSYTGNNKL 477
Query: 575 ESP 577
SP
Sbjct: 478 HSP 480
Score = 39 (18.8 bits), Expect = 1.1e-57, Sum P(3) = 1.1e-57
Identities = 8/22 (36%), Positives = 15/22 (68%)
Query: 246 GVRRAMKLQNNASTSVISSLSM 267
G R+A +L + S S++S L++
Sbjct: 447 GARQAQQLFGSPSPSLLSDLNL 468
>TAIR|locus:2126460 [details] [associations]
symbol:ARF16 "auxin response factor 16" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA;IDA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0035198 "miRNA binding" evidence=ISS] [GO:0007389 "pattern
specification process" evidence=IDA] [GO:0009733 "response to auxin
stimulus" evidence=IEP] [GO:0048829 "root cap development"
evidence=IGI;IMP] [GO:0051301 "cell division" evidence=IGI]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009733 GO:GO:0009734
GO:GO:0051301 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AL161576 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0048829 GO:GO:0035198 GO:GO:0007389
HOGENOM:HOG000241141 eggNOG:NOG315592 EMBL:AL078464 EMBL:AY059792
EMBL:AY091198 EMBL:EU550120 EMBL:EU550121 EMBL:EU550122
EMBL:EU550123 EMBL:EU550124 EMBL:EU550125 EMBL:EU550126
EMBL:EU550127 EMBL:EU550128 EMBL:EU550129 EMBL:EU550130
EMBL:EU550131 EMBL:EU550132 EMBL:EU550133 EMBL:EU550134
EMBL:EU550135 EMBL:EU550136 EMBL:EU550137 EMBL:EU550138
EMBL:EU550139 EMBL:EU550140 EMBL:EU550141 EMBL:EU550142
EMBL:EU550143 IPI:IPI00528149 PIR:T08984 RefSeq:NP_567841.1
UniGene:At.3365 ProteinModelPortal:Q93YR9 SMR:Q93YR9 IntAct:Q93YR9
STRING:Q93YR9 EnsemblPlants:AT4G30080.1 GeneID:829131
KEGG:ath:AT4G30080 GeneFarm:3406 TAIR:At4g30080 InParanoid:Q93YR9
OMA:GHAENAY PhylomeDB:Q93YR9 ProtClustDB:CLSN2917636
Genevestigator:Q93YR9 GermOnline:AT4G30080 Uniprot:Q93YR9
Length = 670
Score = 468 (169.8 bits), Expect = 4.5e-64, Sum P(3) = 4.5e-64
Identities = 100/223 (44%), Positives = 140/223 (62%)
Query: 34 PAEAGGKNELYNELWRACAGPLVYVPRVGDIVYYFLQGHMEQVEAYNSQDDKAELPIYNL 93
P + G + L +LW ACAG +V +P + V+YF QGH E AY+ D LPI
Sbjct: 7 PMKGGTEKGLDPQLWHACAGGMVRMPPMNSKVFYFPQGHAEN--AYDCVDF-GNLPI--- 60
Query: 94 PPKILCEVVYAQLKAEPGTDEVFAQITLLPRPEIDELSLEVGNSPPLPP-KLN---VCSF 149
PP +LC V+ + A+ +DEVFA++ L+P + + + E G+ + N SF
Sbjct: 61 PPMVLCRVLAIKYMADAESDEVFAKLRLIPLKDDEYVDHEYGDGEDSNGFESNSEKTPSF 120
Query: 150 SKKLTPSDTSTHGGFSVPKRHADECLPPLDMSKDPPLQELVAKDLHGLEWRFRHIYRGQP 209
+K LT SD + GGFSVP+ A+ P LD + +PP+Q ++AKD+HG W+FRHIYRG P
Sbjct: 121 AKTLTQSDANNGGGFSVPRYCAETIFPRLDYNAEPPVQTILAKDVHGDVWKFRHIYRGTP 180
Query: 210 KRHLLTSGWSVFVTSKKLVAGDVCIFLRGGDGELRVGVRRAMK 252
+RHLLT+GWS FV KKLVAGD +F+R +G+L VG+RRA +
Sbjct: 181 RRHLLTTGWSNFVNQKKLVAGDSIVFMRAENGDLCVGIRRAKR 223
Score = 182 (69.1 bits), Expect = 4.5e-64, Sum P(3) = 4.5e-64
Identities = 48/133 (36%), Positives = 66/133 (49%)
Query: 271 ILAGAFHAISTGTRFTVYYHPWTRPAEFLVPFSQYMKSAEIDYSIGTRFRMVFEGEECAD 330
++ A AIS G F V Y+P +EF V + I + G RF+M FE E+ +
Sbjct: 276 VIEAATLAIS-GRPFEVVYYPRASTSEFCVKALDARAAMRIPWCSGMRFKMAFETEDSS- 333
Query: 331 QRIA---GTVVGTEDVDHIRWPASEWRCLKVKWDATTDSITRPARVSPWNIEPIERTHKR 387
RI+ GTV D IRWP S WR L+V WD D + RV+PW +E + H
Sbjct: 334 -RISWFMGTVSAVNVSDPIRWPNSPWRLLQVAWDEP-DLLQNVKRVNPWLVELVSNVHPI 391
Query: 388 P-ASVQHQQKRLR 399
P S +K++R
Sbjct: 392 PLTSFSPPRKKMR 404
Score = 88 (36.0 bits), Expect = 4.5e-64, Sum P(3) = 4.5e-64
Identities = 23/86 (26%), Positives = 41/86 (47%)
Query: 621 KVIKFGTALGRSVDLTRFHGYDELISELDQMFDFNGSLIDGNSGFHIAYMDDEGDMMLVG 680
KV +GR++DL+ Y+EL +L MF S + + + Y D G + G
Sbjct: 588 KVFMESDDVGRTLDLSVLGSYEELSRKLSDMFGIKKSEMLSS----VLYRDASGAIKYAG 643
Query: 681 DNPWQDFQCAVRRMFICPKEDIDGVI 706
+ P+ +F RR+ I ++ + V+
Sbjct: 644 NEPFSEFLKTARRLTILTEQGSESVV 669
Score = 43 (20.2 bits), Expect = 1.5e-49, Sum P(3) = 1.5e-49
Identities = 17/60 (28%), Positives = 24/60 (40%)
Query: 436 PLLPSLVRPPNPVWAQMQSGLENKLKFPMHDPFYMCLNRMVSLPGGSLMSPGLSNHWPAS 495
P L LV +P+ S K++ P H + +N S+P S S L P S
Sbjct: 379 PWLVELVSNVHPIPLTSFSPPRKKMRLPQHPDYNNLIN---SIPVPSFPSNPLIRSSPLS 435
>TAIR|locus:2037169 [details] [associations]
symbol:ARF23 "auxin response factor 23" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
SMART:SM01019 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0009734 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
HOGENOM:HOG000241141 EMBL:AC022314 IPI:IPI00526589 PIR:E96503
RefSeq:NP_175062.1 UniGene:At.52022 ProteinModelPortal:Q9LP07
SMR:Q9LP07 EnsemblPlants:AT1G43950.1 GeneID:840994
KEGG:ath:AT1G43950 GeneFarm:3427 TAIR:At1g43950 OMA:PTENENQ
PhylomeDB:Q9LP07 Genevestigator:Q9LP07 GermOnline:AT1G43950
Uniprot:Q9LP07
Length = 222
Score = 525 (189.9 bits), Expect = 1.7e-50, P = 1.7e-50
Identities = 107/212 (50%), Positives = 144/212 (67%)
Query: 38 GGKNELYNELWRACAGPLVYVPRVGDIVYYFLQGHMEQVEAYNSQDDKAEL-PIYNLPPK 96
G K+ +Y +LW+ CAGPL +P++G+ VYYF QGH+E VEA +++++ EL P +LP K
Sbjct: 19 GSKSYMYEQLWKLCAGPLCDIPKLGEKVYYFPQGHIELVEA-STREELNELQPNCDLPSK 77
Query: 97 ILCEVVYAQLKAEPGTDEVFAQITLLPRPEIDELSLEVGNSPPLPPKLNVCSFSKKLTPS 156
+ C V+ LK E +DE + +ITL+P + ++ + N P +N SF+K LT S
Sbjct: 78 LQCRVIAIHLKVENNSDETYVEITLMP--DTTQVVIPTENENQFRPIVN--SFTKVLTAS 133
Query: 157 DTSTHGGFSVPKRHADECLPPLDMSKDPPLQELVAKDLHGLEWRFRHIYRGQPKRHLLTS 216
DTS G FSVP +HA ECLPPLDMS+ P QEL+A DLHG +WRF+H YR P+ T+
Sbjct: 134 DTSAQGEFSVPCKHAIECLPPLDMSQPIPAQELIAIDLHGNQWRFKHSYR-VPRGD--TT 190
Query: 217 GWSVFVTSKKLVAGDVCIFLRGGDGELRVGVR 248
GW+ F TSKKLV GDV +F RG GELRVG+R
Sbjct: 191 GWNAFTTSKKLVVGDVIVFARGETGELRVGIR 222
>TAIR|locus:2029436 [details] [associations]
symbol:ARF17 "auxin response factor 17" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0009653 "anatomical structure morphogenesis"
evidence=IMP] [GO:0009734 "auxin mediated signaling pathway"
evidence=TAS] [GO:0048830 "adventitious root development"
evidence=IMP] [GO:0009555 "pollen development" evidence=IMP]
InterPro:IPR003340 InterPro:IPR010525 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009734 GO:GO:0009555
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 GO:GO:0048830 GO:GO:0009653
EMBL:AC009243 EMBL:AC012193 EMBL:AY056184 EMBL:BT002749
EMBL:EU550144 EMBL:EU550145 EMBL:EU550146 EMBL:EU550147
EMBL:EU550148 EMBL:EU550149 EMBL:EU550150 EMBL:EU550151
EMBL:EU550152 EMBL:EU550153 EMBL:EU550154 EMBL:EU550155
EMBL:EU550156 EMBL:EU550157 EMBL:EU550158 EMBL:EU550159
EMBL:EU550160 EMBL:EU550161 EMBL:EU550162 EMBL:EU550163
EMBL:EU550164 EMBL:EU550165 EMBL:EU550166 EMBL:EU550167
IPI:IPI00522722 PIR:D96808 RefSeq:NP_565161.1 UniGene:At.26363
ProteinModelPortal:Q84WU6 SMR:Q84WU6 IntAct:Q84WU6 STRING:Q84WU6
PRIDE:Q84WU6 EnsemblPlants:AT1G77850.1 GeneID:844120
KEGG:ath:AT1G77850 GeneFarm:3413 TAIR:At1g77850 eggNOG:NOG325741
OMA:IWRACAG PhylomeDB:Q84WU6 ProtClustDB:CLSN2689276
Genevestigator:Q84WU6 GermOnline:AT1G77850 Uniprot:Q84WU6
Length = 585
Score = 418 (152.2 bits), Expect = 1.6e-45, Sum P(2) = 1.6e-45
Identities = 97/221 (43%), Positives = 123/221 (55%)
Query: 35 AEAGGKN--ELYNELWRACAGPLVYVPRVGDIVYYFLQGHMEQVEAYNSQDDKAELPIYN 92
A AG N E+ +WRACAG V +P + VYYF QGH+E S LP
Sbjct: 6 ATAGDINHREVDPTIWRACAGASVQIPVLHSRVYYFPQGHVEHCCPLLST-----LPSST 60
Query: 93 LPPKILCEVVYAQLKAEPGTDEVFAQITLLPRPEIDELSLEVGN----SPPLPPKLNVCS 148
P + C + QL A+P TDEVFA + L P + + V +
Sbjct: 61 SP--VPCIITSIQLLADPVTDEVFAHLILQPMTQQQFTPTNYSRFGRFDGDVDDNNKVTT 118
Query: 149 FSKKLTPSDTSTHGGFSVPKRHADECLPPLDMSKDPPLQELVAKDLHGLEWRFRHIYRGQ 208
F+K LTPSD + GGFSVP+ AD P L+ DPP+Q+L D+HG W FRHIYRG
Sbjct: 119 FAKILTPSDANNGGGFSVPRFCADSVFPLLNFQIDPPVQKLYVTDIHGAVWDFRHIYRGT 178
Query: 209 PKRHLLTSGWSVFVTSKKLVAGDVCIFLRGGDGELRVGVRR 249
P+RHLLT+GWS FV SKKL+AGD +F+R E+ +GVRR
Sbjct: 179 PRRHLLTTGWSKFVNSKKLIAGDSVVFMRKSADEMFIGVRR 219
Score = 113 (44.8 bits), Expect = 1.6e-45, Sum P(2) = 1.6e-45
Identities = 28/105 (26%), Positives = 49/105 (46%)
Query: 275 AFHAISTGTRFTVYYHPWTRPAEFLVPFSQYMKSAEIDYSIGTRFRMVFEGEECADQRIA 334
A + S G F V ++P +EF+V S + ++ GTR +M E E+ +
Sbjct: 274 AINRASQGLPFEVVFYPAAGWSEFVVRAEDVESSMSMYWTPGTRVKMAMETEDSSRITWF 333
Query: 335 GTVVGTEDVDHIRWPASEWRCLKVKWDATTDSITRPARVSPWNIE 379
+V + + W S W+ L++ WD + + RV+PW +E
Sbjct: 334 QGIVSSTYQETGPWRGSPWKQLQITWDEP-EILQNVKRVNPWQVE 377
Score = 42 (19.8 bits), Expect = 4.5e-38, Sum P(2) = 4.5e-38
Identities = 7/13 (53%), Positives = 10/13 (76%)
Query: 537 RTPLAQPNGGSRY 549
RTP++ +GGS Y
Sbjct: 219 RTPISSSDGGSSY 231
>TAIR|locus:2039165 [details] [associations]
symbol:ABS2 "ABNORMAL SHOOT 2" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0080167 "response to karrikin" evidence=IEP] [GO:0009062 "fatty
acid catabolic process" evidence=RCA] InterPro:IPR003340
Pfam:PF02362 PROSITE:PS50863 SMART:SM01019 GO:GO:0005634
GO:GO:0045892 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0080167 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 EMBL:AC007017 EMBL:AC007135
HSSP:Q9ZWM9 HOGENOM:HOG000239355 EMBL:AK117587 EMBL:AJ441075
IPI:IPI00522172 IPI:IPI00531123 PIR:F84776 RefSeq:NP_181152.2
RefSeq:NP_850260.1 UniGene:At.23308 ProteinModelPortal:Q8GYJ2
SMR:Q8GYJ2 PaxDb:Q8GYJ2 EnsemblPlants:AT2G36080.1 GeneID:818181
KEGG:ath:AT2G36080 TAIR:At2g36080 eggNOG:NOG253490
InParanoid:Q8GYJ2 OMA:AQAVESQ PhylomeDB:Q8GYJ2
ProtClustDB:CLSN2680069 Genevestigator:Q8GYJ2 Uniprot:Q8GYJ2
Length = 244
Score = 169 (64.5 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 46/133 (34%), Positives = 67/133 (50%)
Query: 149 FSKKLTPSDTSTHGGFSVPKRHADECLPPLDMSKDPPLQELVA--KDLHGLEWRFRHIYR 206
F K LTPSD +PK+HA+ P + D + L+ +D G WRFR+ Y
Sbjct: 38 FEKPLTPSDVGKLNRLVIPKQHAERYFPLAAAAADAVEKGLLLCFEDEEGKPWRFRYSYW 97
Query: 207 GQPKRHLLTSGWSVFVTSKKLVAGDVCIFLR--GGDGELRVGVRRAMKLQNNAST--SVI 262
+ ++LT GWS +V K L AGDV +F R G +G RR +++ + V
Sbjct: 98 NSSQSYVLTKGWSRYVKEKHLDAGDVVLFHRHRSDGGRFFIGWRRRGDSSSSSDSYRHVQ 157
Query: 263 SSLSMQHGILAGA 275
S+ S+Q+ AGA
Sbjct: 158 SNASLQYYPHAGA 170
>TAIR|locus:2200950 [details] [associations]
symbol:NGA3 "NGATHA3" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009908
"flower development" evidence=IMP] [GO:0048366 "leaf development"
evidence=IMP] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
SMART:SM01019 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 GO:GO:0009908 GO:GO:0048366
HSSP:Q9ZWM9 EMBL:AC007323 eggNOG:NOG237610 HOGENOM:HOG000239355
EMBL:BX814729 IPI:IPI00536920 PIR:B86141 RefSeq:NP_171611.1
UniGene:At.49492 ProteinModelPortal:Q9MAN1 SMR:Q9MAN1 STRING:Q9MAN1
PRIDE:Q9MAN1 EnsemblPlants:AT1G01030.1 GeneID:839321
KEGG:ath:AT1G01030 TAIR:At1g01030 InParanoid:Q9MAN1 OMA:RNIVGSE
PhylomeDB:Q9MAN1 ProtClustDB:CLSN2912766 Genevestigator:Q9MAN1
Uniprot:Q9MAN1
Length = 358
Score = 178 (67.7 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 41/102 (40%), Positives = 55/102 (53%)
Query: 140 LPPKLNVCSFSKKLTPSDTSTHGGFSVPKRHADECLPPLDMSKDPPLQELVAKDLHGLEW 199
+PP F K +TPSD +PK+HA+ P LD S + L +D +G W
Sbjct: 47 IPPPEKEHMFDKVVTPSDVGKLNRLVIPKQHAERYFP-LDSSNNQNGTLLNFQDRNGKMW 105
Query: 200 RFRHIYRGQPKRHLLTSGWSVFVTSKKLVAGDVCIFLRG-GD 240
RFR+ Y + +++T GWS FV KKL AGD+ F RG GD
Sbjct: 106 RFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRGIGD 147
Score = 42 (19.8 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 10/20 (50%), Positives = 11/20 (55%)
Query: 539 PLAQP--NGGSRYMLFGVNL 556
PL P G R LFGVN+
Sbjct: 272 PLPPPPSTAGKRLRLFGVNM 291
>TAIR|locus:2041404 [details] [associations]
symbol:NGA1 "NGATHA1" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009908
"flower development" evidence=IMP] [GO:0048366 "leaf development"
evidence=IMP] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
SMART:SM01019 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC004411
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
GO:GO:0009908 GO:GO:0048366 EMBL:AC005310 HSSP:Q9ZWM9 EMBL:AK118045
EMBL:BT008534 IPI:IPI00537675 PIR:T02200 RefSeq:NP_566089.1
UniGene:At.36441 ProteinModelPortal:O82799 SMR:O82799 IntAct:O82799
STRING:O82799 EnsemblPlants:AT2G46870.1 GeneID:819300
KEGG:ath:AT2G46870 TAIR:At2g46870 eggNOG:NOG237610
HOGENOM:HOG000239355 InParanoid:O82799 OMA:MECGESG PhylomeDB:O82799
ProtClustDB:CLSN2682823 Genevestigator:O82799 Uniprot:O82799
Length = 310
Score = 175 (66.7 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 43/113 (38%), Positives = 59/113 (52%)
Query: 149 FSKKLTPSDTSTHGGFSVPKRHADECLPPLDMSKDPPLQELVAKDLHGLEWRFRHIYRGQ 208
F K +TPSD +PK+HA+ P LD S + L +DL G WRFR+ Y
Sbjct: 35 FDKVVTPSDVGKLNRLVIPKQHAERFFP-LDSSSNEKGLLLNFEDLTGKSWRFRYSYWNS 93
Query: 209 PKRHLLTSGWSVFVTSKKLVAGDVCIFLR-----GGDGELRVGVRRAMKLQNN 256
+ +++T GWS FV KKL AGD+ F R G D L + RR K+ ++
Sbjct: 94 SQSYVMTKGWSRFVKDKKLDAGDIVSFQRCVGDSGRDSRLFIDWRRRPKVPDH 146
>TAIR|locus:2164215 [details] [associations]
symbol:DPA4 "DEVELOPMENT-RELATED PcG TARGET IN THE APEX
4" species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0009062 "fatty acid catabolic
process" evidence=RCA] [GO:0010073 "meristem maintenance"
evidence=IMP] [GO:0010358 "leaf shaping" evidence=IGI] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0048366 "leaf development" evidence=IGI] InterPro:IPR003340
Pfam:PF02362 PROSITE:PS50863 SMART:SM01019 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0045892 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0010073 EMBL:AB006700 GO:GO:0010358
HSSP:Q9ZWM9 HOGENOM:HOG000239355 IPI:IPI00517655 IPI:IPI00891280
RefSeq:NP_001119177.1 RefSeq:NP_196243.2 UniGene:At.54745
ProteinModelPortal:Q9FNI3 SMR:Q9FNI3 EnsemblPlants:AT5G06250.2
GeneID:830512 KEGG:ath:AT5G06250 TAIR:At5g06250 eggNOG:NOG256843
InParanoid:Q9FNI3 OMA:LECQMDE PhylomeDB:Q9FNI3
ProtClustDB:CLSN2702250 Genevestigator:Q9FNI3 Uniprot:Q9FNI3
Length = 282
Score = 154 (59.3 bits), Expect = 6.0e-10, Sum P(2) = 6.0e-10
Identities = 48/152 (31%), Positives = 71/152 (46%)
Query: 149 FSKKLTPSDTSTHGGFSVPKRHADECLP---------PLDMSKDPPLQELVAKDLHGLEW 199
F K LTPSD +PK+HA++ P D S L +D G W
Sbjct: 46 FEKSLTPSDVGKLNRLVIPKQHAEKYFPLNAVLVSSAAADTSSSEKGMLLSFEDESGKSW 105
Query: 200 RFRHIYRGQPKRHLLTSGWSVFVTSKKLVAGDVCIFLRGGDGELR--VGVRRAMKLQNN- 256
RFR+ Y + ++LT GWS FV K+L GDV F R R +G RR + ++
Sbjct: 106 RFRYSYWNSSQSYVLTKGWSRFVKDKQLDPGDVVFFQRHRSDSRRLFIGWRRRGQGSSSS 165
Query: 257 --ASTSVISSLSMQHGILAGAFHAISTGTRFT 286
A+ S +++ SM G L+ +H I + ++
Sbjct: 166 VAATNSAVNTSSM--GALS--YHQIHATSNYS 193
Score = 58 (25.5 bits), Expect = 6.0e-10, Sum P(2) = 6.0e-10
Identities = 25/73 (34%), Positives = 35/73 (47%)
Query: 509 SKNLSVPNASSENS--GSQMCMALELKDENRTPLAQPNGGSRYM-LFGVNLVNSPPELPS 565
+ N S P + SE S G+ + A E + TP + G SR + LFGVNL E
Sbjct: 189 TSNYSNPPSHSEYSHYGAAVATAAET---HSTPSSSVVGSSRTVRLFGVNLECQMDENDG 245
Query: 566 PQ-MATSNELESP 577
+A + +ESP
Sbjct: 246 DDSVAVATTVESP 258
>TAIR|locus:2090527 [details] [associations]
symbol:IAA31 "indole-3-acetic acid inducible 31"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009733 "response
to auxin stimulus" evidence=TAS] [GO:0009630 "gravitropism"
evidence=IMP] [GO:0048364 "root development" evidence=IMP]
[GO:0048367 "shoot system development" evidence=IMP]
InterPro:IPR003311 InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009733
GO:GO:0009734 GO:GO:0003700 GO:GO:0006351 GO:GO:0048364
GO:GO:0009630 GO:GO:0022621 EMBL:AB022219 HOGENOM:HOG000005696
EMBL:AY054274 EMBL:BT000543 IPI:IPI00540266 RefSeq:NP_188387.1
UniGene:At.22356 IntAct:Q8H174 EnsemblPlants:AT3G17600.1
GeneID:821026 KEGG:ath:AT3G17600 GeneFarm:3238 TAIR:At3g17600
eggNOG:NOG267119 InParanoid:Q8H174 OMA:KITRPER PhylomeDB:Q8H174
ProtClustDB:CLSN2913488 Genevestigator:Q8H174 GermOnline:AT3G17600
Uniprot:Q8H174
Length = 158
Score = 150 (57.9 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 51/142 (35%), Positives = 66/142 (46%)
Query: 564 PSPQMATSNELESPCSVPPTSQSSISETIQVSEPSKS-VSGILSEKQCKNCYVSRSC-TK 621
PSP ++ N L + P TS E Q P KS + L ++ S K
Sbjct: 20 PSPSESSVN-LSLSLTFPSTSPQR--EARQDWPPIKSRLRDTLKGRRLLRRGDDTSLFVK 76
Query: 622 VIKFGTALGRSVDLTRFHGYDELISELDQMFDFNGSLIDGNSG--FHI-AYMDDEGDMML 678
V G +GR +DL F GY+ L+ L MFD S+I GN H+ Y D +GD M+
Sbjct: 77 VYMEGVPIGRKLDLCVFSGYESLLENLSHMFDT--SIICGNRDRKHHVLTYEDKDGDWMM 134
Query: 679 VGDNPWQDFQCAVRRMFICPKE 700
VGD PW F VRR+ I E
Sbjct: 135 VGDIPWDMFLETVRRLKITRPE 156
>TAIR|locus:2180557 [details] [associations]
symbol:IAA28 "AT5G25890" species:3702 "Arabidopsis
thaliana" [GO:0005622 "intracellular" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006417 "regulation of
translation" evidence=ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009733
"response to auxin stimulus" evidence=IMP] [GO:0010102 "lateral
root morphogenesis" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006612 "protein targeting to membrane"
evidence=RCA] [GO:0009963 "positive regulation of flavonoid
biosynthetic process" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA]
InterPro:IPR003311 InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009733
GO:GO:0009734 GO:GO:0003700 GO:GO:0006351 EMBL:AF149413
GO:GO:0010102 EMBL:AC005405 HOGENOM:HOG000238261 KO:K14484
EMBL:AF149816 EMBL:BT000427 EMBL:BT002175 IPI:IPI00545995
PIR:T52143 RefSeq:NP_568478.1 UniGene:At.11439 IntAct:Q9XFM0
EnsemblPlants:AT5G25890.1 GeneID:832658 KEGG:ath:AT5G25890
GeneFarm:3188 TAIR:At5g25890 eggNOG:NOG283222 InParanoid:Q9XFM0
OMA:WEMFVST PhylomeDB:Q9XFM0 ProtClustDB:CLSN2917715
Genevestigator:Q9XFM0 GermOnline:AT5G25890 Uniprot:Q9XFM0
Length = 175
Score = 149 (57.5 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 39/116 (33%), Positives = 60/116 (51%)
Query: 581 PPTSQSSISETIQVSEPSKSVSGILSEKQCKNCYVSRSCTKVIKFGTALGRSVDLTRFHG 640
PP S + T Q+ E K S+++ K YV K+ G +GR V+L+ ++
Sbjct: 53 PPVRSSRRNLTAQLKEEMKKKE---SDEE-KELYV-----KINMEGVPIGRKVNLSAYNN 103
Query: 641 YDELISELDQMFDFNGSLIDGNSGFHIAYMDDEGDMMLVGDNPWQDFQCAVRRMFI 696
Y +L +DQ+F S D N + + Y D EGD +LVGD PW+ F V+R+ +
Sbjct: 104 YQQLSHAVDQLFSKKDSW-DLNRQYTLVYEDTEGDKVLVGDVPWEMFVSTVKRLHV 158
>TAIR|locus:2098023 [details] [associations]
symbol:IAA30 "indole-3-acetic acid inducible 30"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009733 "response
to auxin stimulus" evidence=IEP;RCA;TAS] [GO:0009630 "gravitropism"
evidence=IMP] [GO:0048364 "root development" evidence=IMP]
[GO:0010262 "somatic embryogenesis" evidence=IMP] [GO:0010583
"response to cyclopentenone" evidence=RCA] InterPro:IPR003311
InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009733 GO:GO:0009734
GO:GO:0003700 GO:GO:0006351 GO:GO:0048364 GO:GO:0009630
GO:GO:0010262 EMBL:AL138651 PIR:T48002 HOGENOM:HOG000005696
ProtClustDB:CLSN2683572 EMBL:AY669801 IPI:IPI00529772
RefSeq:NP_191769.1 UniGene:At.50305 IntAct:Q9M1R4 STRING:Q9M1R4
EnsemblPlants:AT3G62100.1 GeneID:825383 KEGG:ath:AT3G62100
GeneFarm:3237 TAIR:At3g62100 eggNOG:NOG324376 InParanoid:Q9M1R4
OMA:EMMIMEE PhylomeDB:Q9M1R4 Genevestigator:Q9M1R4
GermOnline:AT3G62100 Uniprot:Q9M1R4
Length = 172
Score = 146 (56.5 bits), Expect = 3.9e-09, P = 3.9e-09
Identities = 38/101 (37%), Positives = 54/101 (53%)
Query: 604 ILSEKQCKNCY-VSRSCTKVIKFGTALGRSVDLTRFHGYDELISELDQMFDFNGSLIDG- 661
I+ E++ C V KV G +GR +DL +GY +LI+ LD MF N S++
Sbjct: 68 IMEEEEQNECNSVGSFYVKVNMEGVPIGRKIDLLSLNGYHDLITTLDYMF--NASILWAE 125
Query: 662 -----NSGFHI-AYMDDEGDMMLVGDNPWQDFQCAVRRMFI 696
+ H+ Y D EGD M+VGD PW+ F +VRR+ I
Sbjct: 126 EEDMCSEKSHVLTYADKEGDWMMVGDVPWEMFLSSVRRLKI 166
>TAIR|locus:2117007 [details] [associations]
symbol:NGA4 "NGATHA4" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009908
"flower development" evidence=IMP] [GO:0048366 "leaf development"
evidence=IMP] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
SMART:SM01019 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 GO:GO:0009908 GO:GO:0048366
EMBL:AF096370 EMBL:AL161492 HSSP:Q9ZWM9 HOGENOM:HOG000239355
EMBL:FJ873734 EMBL:BT029520 EMBL:AB493670 IPI:IPI00543194
PIR:T01944 RefSeq:NP_192059.4 UniGene:At.34418
ProteinModelPortal:O82595 SMR:O82595 STRING:O82595 PRIDE:O82595
EnsemblPlants:AT4G01500.1 GeneID:826750 KEGG:ath:AT4G01500
TAIR:At4g01500 eggNOG:NOG287578 InParanoid:O82595 OMA:YSSERRE
Genevestigator:O82595 Uniprot:O82595
Length = 333
Score = 165 (63.1 bits), Expect = 3.9e-09, P = 3.9e-09
Identities = 50/175 (28%), Positives = 82/175 (46%)
Query: 149 FSKKLTPSDTSTHGGFSVPKRHADECLPPLDMSKDPPLQELVAKDLHGLEWRFRHIYRGQ 208
F K LTPSD +PK+HA+ P L+ +++ + + +D +G WRFR+ Y
Sbjct: 36 FDKVLTPSDVGKLNRLVIPKQHAENFFP-LEDNQNGTVLDF--QDKNGKMWRFRYSYWNS 92
Query: 209 PKRHLLTSGWSVFVTSKKLVAGDVCIFLRG--GDGELRVGVRRAMKL---QNNASTSVIS 263
+ +++T GWS FV KKL AGD F RG D + RR + + A + +
Sbjct: 93 SQSYVMTKGWSRFVKEKKLFAGDTVSFYRGYIPDDNAQPERRRKIMFIDWRPRAEINFVH 152
Query: 264 SLSMQHGILAGAFHAISTGTRFTVYYHPWTRPAEFLVPF--SQYMKSAEIDYSIG 316
+++ H + G+ T RF ++ P PF +Q+ + + Y G
Sbjct: 153 NIN-NHNFVFGS-PTYPTA-RFYPVTPEYSMPYRSFPPFYQNQFQEREYLGYGYG 204
>TAIR|locus:2041324 [details] [associations]
symbol:IAA20 "indole-3-acetic acid inducible 20"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009733 "response
to auxin stimulus" evidence=IEP;TAS] [GO:0009630 "gravitropism"
evidence=IMP] [GO:0009647 "skotomorphogenesis" evidence=IMP]
[GO:0010588 "cotyledon vascular tissue pattern formation"
evidence=IMP] [GO:0048364 "root development" evidence=IMP]
InterPro:IPR003311 InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009733
GO:GO:0009734 GO:GO:0003700 GO:GO:0006351 GO:GO:0048364
EMBL:AC004411 GO:GO:0009630 GO:GO:0009647 GO:GO:0010588
EMBL:AK117233 EMBL:AF348576 EMBL:U49076 IPI:IPI00547197 PIR:T02188
RefSeq:NP_182222.1 UniGene:At.10480 IntAct:O24410 STRING:O24410
DNASU:819313 EnsemblPlants:AT2G46990.1 GeneID:819313
KEGG:ath:AT2G46990 GeneFarm:3236 TAIR:At2g46990 eggNOG:NOG254610
HOGENOM:HOG000005696 InParanoid:O24410 OMA:KISRANY PhylomeDB:O24410
ProtClustDB:CLSN2683572 Genevestigator:O24410 GermOnline:AT2G46990
Uniprot:O24410
Length = 175
Score = 144 (55.7 bits), Expect = 6.3e-09, P = 6.3e-09
Identities = 39/108 (36%), Positives = 56/108 (51%)
Query: 596 EPSKSVSGILSEKQCKNCYVSRSCTKVIKFGTALGRSVDLTRFHGYDELISELDQMFDFN 655
E ++ V+ + E++ + V KV G +GR +DL +GY +LI LD F FN
Sbjct: 63 EDAEYVAAVEEEEENECNSVGSFYVKVNMEGVPIGRKIDLMSLNGYRDLIRTLD--FMFN 120
Query: 656 GSLIDG------NSGFHI-AYMDDEGDMMLVGDNPWQDFQCAVRRMFI 696
S++ N H+ Y D EGD M+VGD PW+ F VRR+ I
Sbjct: 121 ASILWAEEEDMCNEKSHVLTYADKEGDWMMVGDVPWEMFLSTVRRLKI 168
>TAIR|locus:2205319 [details] [associations]
symbol:RAV1 "related to ABI3/VP1 1" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;ISS;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS] [GO:0009741 "response to
brassinosteroid stimulus" evidence=IEP] [GO:0009910 "negative
regulation of flower development" evidence=IMP] [GO:0048366 "leaf
development" evidence=IMP] [GO:0048527 "lateral root development"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006612 "protein targeting to
membrane" evidence=RCA] [GO:0009963 "positive regulation of
flavonoid biosynthetic process" evidence=RCA] [GO:0010363
"regulation of plant-type hypersensitive response" evidence=RCA]
InterPro:IPR001471 InterPro:IPR003340 InterPro:IPR016177
Pfam:PF00847 Pfam:PF02362 PROSITE:PS50863 PROSITE:PS51032
SMART:SM00380 SMART:SM01019 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005634 GO:GO:0045892 EMBL:AC011810 GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0048527
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0009910 GO:GO:0048366
GO:GO:0009741 EMBL:AB013886 EMBL:AY063855 EMBL:AY091291
IPI:IPI00544013 PIR:T51329 RefSeq:NP_172784.1 UniGene:At.20558
PDB:1WID PDBsum:1WID ProteinModelPortal:Q9ZWM9 SMR:Q9ZWM9
STRING:Q9ZWM9 EnsemblPlants:AT1G13260.1 GeneID:837886
KEGG:ath:AT1G13260 TAIR:At1g13260 eggNOG:NOG266118
HOGENOM:HOG000237484 InParanoid:Q9ZWM9 KO:K09287 OMA:ICETPAI
PhylomeDB:Q9ZWM9 ProtClustDB:CLSN2682511 EvolutionaryTrace:Q9ZWM9
Genevestigator:Q9ZWM9 GermOnline:AT1G13260 Uniprot:Q9ZWM9
Length = 344
Score = 162 (62.1 bits), Expect = 9.3e-09, P = 9.3e-09
Identities = 41/102 (40%), Positives = 56/102 (54%)
Query: 149 FSKKLTPSDTSTHGGFSVPKRHADEC--LPPLDMSKDPPLQELVAKDLHGLEWRFRHIYR 206
F K +TPSD +PK HA++ LP ++S L L +D++G WRFR+ Y
Sbjct: 188 FEKAVTPSDVGKLNRLVIPKHHAEKHFPLPSSNVSVKGVL--LNFEDVNGKVWRFRYSYW 245
Query: 207 GQPKRHLLTSGWSVFVTSKKLVAGDVCIFLR--GGDGELRVG 246
+ ++LT GWS FV K L AGDV F R G D +L +G
Sbjct: 246 NSSQSYVLTKGWSRFVKEKNLRAGDVVSFSRSNGQDQQLYIG 287
>UNIPROTKB|Q6K846 [details] [associations]
symbol:IAA9 "Auxin-responsive protein IAA9" species:39947
"Oryza sativa Japonica Group" [GO:0009733 "response to auxin
stimulus" evidence=IC] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0006355 GO:GO:0006351 HOGENOM:HOG000238261
ProtClustDB:CLSN2695987 EMBL:AC069158 EMBL:AP004240 EMBL:AK073365
RefSeq:NP_001048437.1 UniGene:Os.23256
EnsemblPlants:LOC_Os02g56120.1 EnsemblPlants:LOC_Os02g56120.2
GeneID:4331061 KEGG:dosa:Os02t0805100-01 KEGG:osa:4331061
Gramene:Q6K846 eggNOG:NOG253641 OMA:ARSRACG Uniprot:Q6K846
Length = 182
Score = 141 (54.7 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 37/85 (43%), Positives = 46/85 (54%)
Query: 621 KVIKFGTALGRSVDLTRFHGYDELISELDQMF---DFNGSLIDGN------SGFHIAYMD 671
KV K G A+GR VDL YDEL + L +MF D G N +G + Y D
Sbjct: 96 KVKKEGDAIGRKVDLALHSSYDELAATLARMFPTNDHQGEKKMANDDHGDAAGPVVTYED 155
Query: 672 DEGDMMLVGDNPWQDFQCAVRRMFI 696
+GD MLVGD PW DF +V+R+ I
Sbjct: 156 GDGDWMLVGDVPWDDFARSVKRLKI 180
>TAIR|locus:2018379 [details] [associations]
symbol:SHY2 "SHORT HYPOCOTYL 2" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0009733 "response to auxin stimulus"
evidence=RCA;IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009741 "response to brassinosteroid stimulus" evidence=RCA]
[GO:0048527 "lateral root development" evidence=RCA]
InterPro:IPR003311 InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009733
GO:GO:0006417 GO:GO:0009734 GO:GO:0003700 GO:GO:0006351
EMBL:AC000104 HOGENOM:HOG000238261 KO:K14484
ProtClustDB:CLSN2681778 EMBL:U18406 EMBL:AF332393 EMBL:AY064007
IPI:IPI00519738 PIR:S58491 RefSeq:NP_171920.1 UniGene:At.20801
DIP:DIP-31741N IntAct:Q38822 STRING:Q38822 ProMEX:Q38822
DNASU:839570 EnsemblPlants:AT1G04240.1 GeneID:839570
KEGG:ath:AT1G04240 GeneFarm:3143 TAIR:At1g04240 eggNOG:NOG275456
InParanoid:Q38822 OMA:KNESEHE PhylomeDB:Q38822
Genevestigator:Q38822 GermOnline:AT1G04240 Uniprot:Q38822
Length = 189
Score = 141 (54.7 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 38/105 (36%), Positives = 53/105 (50%)
Query: 606 SEKQCKNCYVSRSCTKVIKFGTALGRSVDLTRFHGYDELISELDQMFDFN-GSLI--DGN 662
SE + + YV KV G R +DL+ + GY EL+ L+ MF F+ G DG
Sbjct: 86 SEHEGQGIYV-----KVSMDGAPYLRKIDLSCYKGYSELLKALEVMFKFSVGEYFERDGY 140
Query: 663 SG--FHIAYMDDEGDMMLVGDNPWQDFQCAVRRMFICPKEDIDGV 705
G F Y D +GD ML+GD PW+ F C +R+ I + G+
Sbjct: 141 KGSDFVPTYEDKDGDWMLIGDVPWEMFICTCKRLRIMKGSEAKGL 185
>TAIR|locus:2170862 [details] [associations]
symbol:ATAUX2-11 "AT5G43700" species:3702 "Arabidopsis
thaliana" [GO:0005622 "intracellular" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006417 "regulation
of translation" evidence=ISS] [GO:0009733 "response to auxin
stimulus" evidence=IEP;ISS;RCA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0007020
"microtubule nucleation" evidence=RCA] [GO:0009736 "cytokinin
mediated signaling pathway" evidence=RCA] [GO:0010583 "response to
cyclopentenone" evidence=RCA] [GO:0003677 "DNA binding"
evidence=ISS] InterPro:IPR003311 InterPro:IPR011525 Pfam:PF02309
PROSITE:PS50962 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009536 GO:GO:0009733 GO:GO:0009734
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AB026651
HOGENOM:HOG000238261 ProtClustDB:CLSN2681778 UniGene:At.47260
EMBL:X53435 EMBL:L15450 EMBL:BT005853 IPI:IPI00523552 PIR:S12243
RefSeq:NP_199183.1 IntAct:P33077 STRING:P33077
EnsemblPlants:AT5G43700.1 GeneID:834390 KEGG:ath:AT5G43700
GeneFarm:3150 TAIR:At5g43700 eggNOG:NOG253406 InParanoid:P33077
OMA:KVYKSYP PhylomeDB:P33077 Genevestigator:P33077
GermOnline:AT5G43700 Uniprot:P33077
Length = 186
Score = 138 (53.6 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 47/146 (32%), Positives = 69/146 (47%)
Query: 569 ATSNELESP----CSVPPTSQSSISETIQVSEPSKSVSGILSEKQCKNCYVSRSCTKVIK 624
AT E+ES + PP +Q ++ S +V SE + + YV KV
Sbjct: 42 ATEKEIESTGKTETASPPKAQIVGWPPVR-SYRKNNVQTKKSESEGQGNYV-----KVSM 95
Query: 625 FGTALGRSVDLTRFHGYDELISELDQMFDFN-GSLID--GNSG--FHIAYMDDEGDMMLV 679
G R +DLT + Y EL+ L+ MF F+ G + G G F Y D +GD MLV
Sbjct: 96 DGAPYLRKIDLTMYKQYPELMKSLENMFKFSVGEYFEREGYKGSDFVPTYEDKDGDWMLV 155
Query: 680 GDNPWQDFQCAVRRMFICPKEDIDGV 705
GD PW+ F + +R+ I ++ G+
Sbjct: 156 GDVPWEMFVSSCKRLRIMKGSEVKGL 181
>TAIR|locus:2129910 [details] [associations]
symbol:IAA1 "indole-3-acetic acid inducible" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0042802 "identical
protein binding" evidence=IPI] [GO:0005515 "protein binding"
evidence=IPI] [GO:0009733 "response to auxin stimulus"
evidence=IEP;RCA] [GO:0009741 "response to brassinosteroid
stimulus" evidence=RCA] [GO:0010583 "response to cyclopentenone"
evidence=RCA] [GO:0048527 "lateral root development" evidence=RCA]
InterPro:IPR003311 InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009733
GO:GO:0006417 GO:GO:0009734 GO:GO:0003700 GO:GO:0006351 EMBL:Z97336
EMBL:AL161539 HOGENOM:HOG000238261 EMBL:L15448 EMBL:AY133714
IPI:IPI00539077 PIR:A71408 RefSeq:NP_193192.1 UniGene:At.43941
IntAct:P49677 STRING:P49677 DNASU:827103 EnsemblPlants:AT4G14560.1
GeneID:827103 KEGG:ath:AT4G14560 GeneFarm:3140 TAIR:At4g14560
eggNOG:NOG329801 InParanoid:P49677 OMA:CQKLRIM PhylomeDB:P49677
ProtClustDB:CLSN2681778 Genevestigator:P49677 GermOnline:AT4G14560
Uniprot:P49677
Length = 168
Score = 137 (53.3 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 46/154 (29%), Positives = 71/154 (46%)
Query: 553 GVNLVNSPPELPSPQMATSNELESPCSVPPTSQSSISETIQVSEPSKSVSGILS-----E 607
G+NL ++ L P +LE C V ++ +++ + S P + + I+
Sbjct: 6 GLNLKDTELRLGLPGAQEEQQLELSC-VRSNNKRKNNDSTEESAPPPAKTQIVGWPPVRS 64
Query: 608 KQCKNCYVSRSCTKVIKFGTALGRSVDLTRFHGYDELISELDQMFDFN-G--SLIDG--N 662
+ N + S KV G R +DL + Y EL+ L+ MF F G S +G
Sbjct: 65 NRKNNNNKNVSYVKVSMDGAPYLRKIDLKMYKNYPELLKALENMFKFTVGEYSEREGYKG 124
Query: 663 SGFHIAYMDDEGDMMLVGDNPWQDFQCAVRRMFI 696
SGF Y D +GD MLVGD PW F + +++ I
Sbjct: 125 SGFVPTYEDKDGDWMLVGDVPWDMFSSSCQKLRI 158
>TAIR|locus:2079537 [details] [associations]
symbol:NGA2 "NGATHA2" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009908
"flower development" evidence=IMP] [GO:0048366 "leaf development"
evidence=IMP] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
SMART:SM01019 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 GO:GO:0009908 GO:GO:0048366
EMBL:AL138642 HSSP:Q9ZWM9 HOGENOM:HOG000239355
ProtClustDB:CLSN2682823 EMBL:AK117646 EMBL:BT025866 EMBL:AY085197
IPI:IPI00523321 PIR:T47989 RefSeq:NP_191756.1 UniGene:At.34201
ProteinModelPortal:Q9M268 SMR:Q9M268 EnsemblPlants:AT3G61970.1
GeneID:825370 KEGG:ath:AT3G61970 TAIR:At3g61970 eggNOG:NOG273145
InParanoid:Q9M268 OMA:SSSMERE PhylomeDB:Q9M268
Genevestigator:Q9M268 Uniprot:Q9M268
Length = 299
Score = 155 (59.6 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 40/113 (35%), Positives = 57/113 (50%)
Query: 149 FSKKLTPSDTSTHGGFSVPKRHADECLPPLDMSKDPPLQE---LVAKDLHGLEWRFRHIY 205
F K +TPSD +PK+HA+ P LD S + L +D G WRFR+ Y
Sbjct: 23 FDKVVTPSDVGKLNRLVIPKQHAERYFP-LDNSTTNDSNKGLLLNFEDRSGNSWRFRYSY 81
Query: 206 RGQPKRHLLTSGWSVFVTSKKLVAGDVCIFLRGG--DGELRVGVRRAMKLQNN 256
+ +++T GWS FV KKL AGD+ F R +L + RR K+ ++
Sbjct: 82 WNSSQSYVMTKGWSRFVKDKKLDAGDIVSFQRDSCNKDKLYIDWRRRPKIPDH 134
>TAIR|locus:2090141 [details] [associations]
symbol:IAA19 "indole-3-acetic acid inducible 19"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0009630 "gravitropism"
evidence=NAS] [GO:0009638 "phototropism" evidence=NAS] [GO:0009733
"response to auxin stimulus" evidence=RCA;NAS;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0080086 "stamen filament development" evidence=IMP] [GO:0009741
"response to brassinosteroid stimulus" evidence=RCA] [GO:0048527
"lateral root development" evidence=RCA] InterPro:IPR003311
InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009733 GO:GO:0009734
GO:GO:0003700 GO:GO:0006351 EMBL:AB022218 EMBL:AC024081
HOGENOM:HOG000238261 KO:K14484 EMBL:AY088753 EMBL:U49075
IPI:IPI00522744 RefSeq:NP_188173.1 UniGene:At.10479 IntAct:O24409
STRING:O24409 EnsemblPlants:AT3G15540.1 GeneID:820793
KEGG:ath:AT3G15540 GeneFarm:3183 TAIR:At3g15540 eggNOG:NOG325225
InParanoid:O24409 OMA:NCEYVTI PhylomeDB:O24409
ProtClustDB:CLSN2679755 Genevestigator:O24409 GermOnline:AT3G15540
GO:GO:0080086 Uniprot:O24409
Length = 197
Score = 141 (54.7 bits), Expect = 6.6e-08, P = 6.6e-08
Identities = 49/152 (32%), Positives = 71/152 (46%)
Query: 568 MATSNELESPCSVPPTSQSSISETIQVSEPSKS-VSG---ILSEKQCKNCYVSRSCTKV- 622
M +S C S +E + S +KS V G + S ++ KN S TKV
Sbjct: 37 MTSSGSNSDQCESGVVSSGGDAEKVNDSPAAKSQVVGWPPVCSYRK-KNSCKEASTTKVG 95
Query: 623 ---IKF---GTALGRSVDLTRFHGYDELISELDQMFDFNG---SLIDGNSGFHIA-YMDD 672
+K G R +DL GYD+L LD++F F G +L DG++ ++ Y D
Sbjct: 96 LGYVKVSMDGVPYLRKMDLGSSQGYDDLAFALDKLFGFRGIGVALKDGDNCEYVTIYEDK 155
Query: 673 EGDMMLVGDNPWQDFQCAVRRMFICPKEDIDG 704
+GD ML GD PW F + +R+ I + D G
Sbjct: 156 DGDWMLAGDVPWGMFLESCKRLRIMKRSDATG 187
>TAIR|locus:2012438 [details] [associations]
symbol:RAV2 "related to ABI3/VP1 2" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0010167 "response to nitrate"
evidence=RCA] [GO:0010200 "response to chitin" evidence=RCA]
[GO:0015706 "nitrate transport" evidence=RCA] InterPro:IPR001471
InterPro:IPR003340 InterPro:IPR016177 Pfam:PF00847 Pfam:PF02362
PROSITE:PS50863 PROSITE:PS51032 SMART:SM00380 SMART:SM01019
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0045892
GO:GO:0009873 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
Gene3D:3.30.730.10 SUPFAM:SSF54171 EMBL:AC011914 EMBL:AC011665
HSSP:Q9ZWM9 eggNOG:NOG266118 HOGENOM:HOG000237484 KO:K09287
ProtClustDB:CLSN2682511 EMBL:AB013887 EMBL:AF360312 EMBL:AY056361
EMBL:AY085908 EMBL:AF003101 IPI:IPI00548727 PIR:T51330
RefSeq:NP_001185352.1 RefSeq:NP_564947.1 UniGene:At.25344
ProteinModelPortal:P82280 SMR:P82280 DIP:DIP-59694N STRING:P82280
PaxDb:P82280 PRIDE:P82280 EnsemblPlants:AT1G68840.1
EnsemblPlants:AT1G68840.2 GeneID:843216 KEGG:ath:AT1G68840
TAIR:At1g68840 InParanoid:P82280 OMA:MDSSCID PhylomeDB:P82280
Genevestigator:P82280 Uniprot:P82280
Length = 352
Score = 153 (58.9 bits), Expect = 9.9e-08, P = 9.9e-08
Identities = 37/92 (40%), Positives = 51/92 (55%)
Query: 149 FSKKLTPSDTSTHGGFSVPKRHADECLPPLDMSKDPPLQELVA---KDLHGLEWRFRHIY 205
F K +TPSD +PK+HA++ P L S P + + V +D++G WRFR+ Y
Sbjct: 188 FEKAVTPSDVGKLNRLVIPKQHAEKHFP-LP-SPSPAVTKGVLINFEDVNGKVWRFRYSY 245
Query: 206 RGQPKRHLLTSGWSVFVTSKKLVAGDVCIFLR 237
+ ++LT GWS FV K L AGDV F R
Sbjct: 246 WNSSQSYVLTKGWSRFVKEKNLRAGDVVTFER 277
>TAIR|locus:2085969 [details] [associations]
symbol:EDF3 "ethylene response DNA binding factor 3"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0009691 "cytokinin biosynthetic
process" evidence=RCA] InterPro:IPR001471 InterPro:IPR003340
InterPro:IPR016177 Pfam:PF00847 Pfam:PF02362 PROSITE:PS50863
PROSITE:PS51032 SMART:SM00380 SMART:SM01019 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009873 EMBL:AB028607
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:Q9ZWM9 eggNOG:NOG266118 HOGENOM:HOG000237484
KO:K09287 ProtClustDB:CLSN2682511 EMBL:AJ441073 EMBL:AK229415
EMBL:AY087951 IPI:IPI00523797 RefSeq:NP_189201.1 UniGene:At.37331
ProteinModelPortal:Q9LS06 SMR:Q9LS06 EnsemblPlants:AT3G25730.1
GeneID:822164 KEGG:ath:AT3G25730 TAIR:At3g25730 InParanoid:Q9LS06
OMA:NAHSKSE Genevestigator:Q9LS06 Uniprot:Q9LS06
Length = 333
Score = 152 (58.6 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 35/94 (37%), Positives = 50/94 (53%)
Query: 149 FSKKLTPSDTSTHGGFSVPKRHADECLP-PLDMSKDPPLQELVA-KDLHGLEWRFRHIYR 206
F K +TPSD +PK A++ P PL + L+ +D++G WRFR+ Y
Sbjct: 183 FEKTVTPSDVGKLNRLVIPKHQAEKHFPLPLGNNNVSVKGMLLNFEDVNGKVWRFRYSYW 242
Query: 207 GQPKRHLLTSGWSVFVTSKKLVAGDVCIFLRGGD 240
+ ++LT GWS FV K+L AGD+ F R D
Sbjct: 243 NSSQSYVLTKGWSRFVKEKRLCAGDLISFKRSND 276
>TAIR|locus:2197838 [details] [associations]
symbol:IAA12 "indole-3-acetic acid inducible 12"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0009733 "response to auxin
stimulus" evidence=IGI] [GO:0009880 "embryonic pattern
specification" evidence=IMP] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0010051 "xylem and phloem
pattern formation" evidence=IMP] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IDA] [GO:0048364 "root
development" evidence=IMP] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0045892 GO:GO:0009733
GO:GO:0009734 GO:GO:0003700 GO:GO:0006351 GO:GO:0048364
GO:GO:0010051 EMBL:AC002376 GO:GO:0009880 HOGENOM:HOG000238261
EMBL:U18414 EMBL:AF332398 EMBL:AY065240 EMBL:AY096535 EMBL:AY088042
IPI:IPI00527949 PIR:S58498 RefSeq:NP_171949.1 UniGene:At.10466
UniGene:At.10797 IntAct:Q38830 STRING:Q38830 PRIDE:Q38830
DNASU:839495 EnsemblPlants:AT1G04550.2 GeneID:839495
KEGG:ath:AT1G04550 GeneFarm:3159 TAIR:At1g04550 eggNOG:NOG330636
InParanoid:Q38830 KO:K14484 OMA:WKERGRI PhylomeDB:Q38830
ProtClustDB:CLSN2681806 Genevestigator:Q38830 Uniprot:Q38830
Length = 239
Score = 145 (56.1 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 36/98 (36%), Positives = 51/98 (52%)
Query: 621 KVIKFGTALGRSVDLTRFHGYDELISELDQMF-DFNGS----------LIDGNSGFHIAY 669
KV G +GR VD+ Y+ L L++MF G+ L+DG+S F + Y
Sbjct: 128 KVNMDGVGIGRKVDMRAHSSYENLAQTLEEMFFGMTGTTCREKVKPLRLLDGSSDFVLTY 187
Query: 670 MDDEGDMMLVGDNPWQDFQCAVRRMFICPKEDIDGVIP 707
D EGD MLVGD PW+ F +V+R+ I + G+ P
Sbjct: 188 EDKEGDWMLVGDVPWRMFINSVKRLRIMGTSEASGLAP 225
>TAIR|locus:2031185 [details] [associations]
symbol:TEM1 "TEMPRANILLO 1" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;NAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0009873 "ethylene mediated signaling pathway" evidence=NAS]
[GO:0048573 "photoperiodism, flowering" evidence=IMP] [GO:0030003
"cellular cation homeostasis" evidence=RCA] [GO:0070838 "divalent
metal ion transport" evidence=RCA] InterPro:IPR001471
InterPro:IPR003340 InterPro:IPR016177 Pfam:PF00847 Pfam:PF02362
PROSITE:PS50863 PROSITE:PS51032 SMART:SM00380 SMART:SM01019
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 EMBL:AC079281
GO:GO:0009873 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0048573 HSSP:Q9ZWM9
HOGENOM:HOG000237484 KO:K09287 ProtClustDB:CLSN2682511
EMBL:AY091069 EMBL:AY122941 IPI:IPI00518546 PIR:A86386
RefSeq:NP_173927.1 UniGene:At.17318 ProteinModelPortal:Q9C6M5
SMR:Q9C6M5 DIP:DIP-59693N PaxDb:Q9C6M5 PRIDE:Q9C6M5
EnsemblPlants:AT1G25560.1 GeneID:839143 KEGG:ath:AT1G25560
TAIR:At1g25560 eggNOG:NOG250438 InParanoid:Q9C6M5 OMA:NDVAVEC
PhylomeDB:Q9C6M5 Genevestigator:Q9C6M5 Uniprot:Q9C6M5
Length = 361
Score = 154 (59.3 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 40/106 (37%), Positives = 55/106 (51%)
Query: 149 FSKKLTPSDTSTHGGFSVPKRHADECLP-P-----LDMSKDPPLQELV-AKDLHGLEWRF 201
F K +TPSD +PK+HA++ P P + M+ P L+ +D G WRF
Sbjct: 195 FEKTVTPSDVGKLNRLVIPKQHAEKHFPLPAMTTAMGMNPSPTKGVLINLEDRTGKVWRF 254
Query: 202 RHIYRGQPKRHLLTSGWSVFVTSKKLVAGDVCIFLR--GGDGELRV 245
R+ Y + ++LT GWS FV K L AGDV F R G D +L +
Sbjct: 255 RYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVCFERSTGPDRQLYI 300
Score = 39 (18.8 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 8/15 (53%), Positives = 10/15 (66%)
Query: 551 LFGVNLVNSPPELPS 565
LFGVN+ N E P+
Sbjct: 315 LFGVNIFNVSNEKPN 329
>TAIR|locus:2051154 [details] [associations]
symbol:IAA13 "auxin-induced protein 13" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009733 "response
to auxin stimulus" evidence=RCA;TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000394 "RNA splicing, via endonucleolytic
cleavage and ligation" evidence=RCA] [GO:0009086 "methionine
biosynthetic process" evidence=RCA] InterPro:IPR003311
InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009733 GO:GO:0009734
GO:GO:0003700 GO:GO:0006351 EMBL:AC002332 HOGENOM:HOG000238261
UniGene:At.10797 ProtClustDB:CLSN2681806 EMBL:U18415 EMBL:AF332399
EMBL:BT005874 EMBL:AY085194 EMBL:Z26543 IPI:IPI00536192
IPI:IPI00548760 PIR:S58499 RefSeq:NP_001118434.1 RefSeq:NP_180889.1
RefSeq:NP_850205.1 UniGene:At.74387 IntAct:Q38831 STRING:Q38831
EnsemblPlants:AT2G33310.2 GeneID:817894 KEGG:ath:AT2G33310
GeneFarm:3160 TAIR:At2g33310 eggNOG:NOG308656 InParanoid:Q38831
OMA:LEDMFFR PhylomeDB:Q38831 Genevestigator:Q38831
GermOnline:AT2G33310 Uniprot:Q38831
Length = 247
Score = 141 (54.7 bits), Expect = 7.3e-07, P = 7.3e-07
Identities = 38/110 (34%), Positives = 53/110 (48%)
Query: 621 KVIKFGTALGRSVDLTRFHGYDELISELDQMF------------DFNGSL--IDGNSGFH 666
KV G A+GR VDL Y+ L L+ MF F L +DG+S F
Sbjct: 133 KVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGLTSQFTKPLRLLDGSSEFV 192
Query: 667 IAYMDDEGDMMLVGDNPWQDFQCAVRRMFICPKEDIDGVIPSSPNPTPPQ 716
+ Y D EGD MLVGD PW+ F +V+R+ + + +G+ + P Q
Sbjct: 193 LTYEDKEGDWMLVGDVPWRMFINSVKRLRVMKTSEANGLAARNQEPNERQ 242
>TAIR|locus:2080782 [details] [associations]
symbol:AT3G11580 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009062
"fatty acid catabolic process" evidence=RCA] InterPro:IPR003340
Pfam:PF02362 PROSITE:PS50863 SMART:SM01019 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 EMBL:AC008153 HSSP:Q9ZWM9 HOGENOM:HOG000239355
EMBL:AJ441076 EMBL:AK175281 EMBL:BT029371 IPI:IPI00539345
IPI:IPI00547561 RefSeq:NP_187765.2 RefSeq:NP_850559.1
UniGene:At.39724 ProteinModelPortal:Q8RYD3 SMR:Q8RYD3
EnsemblPlants:AT3G11580.1 GeneID:820331 KEGG:ath:AT3G11580
TAIR:At3g11580 eggNOG:NOG285931 InParanoid:Q8RYD3 OMA:CHGDAVE
PhylomeDB:Q8RYD3 ProtClustDB:CLSN2918062 Genevestigator:Q8RYD3
Uniprot:Q8RYD3
Length = 267
Score = 142 (55.0 bits), Expect = 7.7e-07, P = 7.7e-07
Identities = 42/127 (33%), Positives = 63/127 (49%)
Query: 149 FSKKLTPSDTSTHGGFSVPKRHADECLPPLDMSKDPPLQELVA----------KDLHGLE 198
F K LTPSD +PK+HA++ P + + + + VA +D G
Sbjct: 29 FEKSLTPSDVGKLNRLVIPKQHAEKYFPLNNNNNNGGSGDDVATTEKGMLLSFEDESGKC 88
Query: 199 WRFRHIYRGQPKRHLLTSGWSVFVTSKKLVAGDVCIFLRGG-D-GELRVGVRRAMKLQNN 256
W+FR+ Y + ++LT GWS +V K L AGDV F R D L +G RR + ++
Sbjct: 89 WKFRYSYWNSSQSYVLTKGWSRYVKDKHLDAGDVVFFQRHRFDLHRLFIGWRRRGEASSS 148
Query: 257 ASTSVIS 263
+ SV+S
Sbjct: 149 PAVSVVS 155
>UNIPROTKB|Q652A1 [details] [associations]
symbol:IAA26 "Auxin-responsive protein IAA26" species:39947
"Oryza sativa Japonica Group" [GO:0009733 "response to auxin
stimulus" evidence=IC] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0006355 GO:GO:0006351 HOGENOM:HOG000238261
EMBL:AP005681 EMBL:AK111128 RefSeq:NP_001063732.1 UniGene:Os.57199
EnsemblPlants:LOC_Os09g35870.1 GeneID:4347643
KEGG:dosa:Os09t0527700-01 KEGG:osa:4347643 Gramene:Q652A1
eggNOG:NOG296772 OMA:WEHAVVY ProtClustDB:CLSN2697868 Uniprot:Q652A1
Length = 140
Score = 122 (48.0 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 31/77 (40%), Positives = 43/77 (55%)
Query: 621 KVIKFGTALGRSVDLTRFHGYDELISELDQMFDFNG-SLIDGNSGF-H-IAYMDDEGDMM 677
KV GT R VD+ + Y EL+ L+ MF + L+DG + H + Y D +GD M
Sbjct: 49 KVSMDGTPYLRKVDVAAYGDYLELVEALNDMFYCSTIGLMDGYGEWEHAVVYEDGDGDWM 108
Query: 678 LVGDNPWQDFQCAVRRM 694
LVGD PW+ F + +RM
Sbjct: 109 LVGDVPWEMFVSSCKRM 125
>TAIR|locus:2020255 [details] [associations]
symbol:IAA10 "indoleacetic acid-induced protein 10"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009733 "response
to auxin stimulus" evidence=TAS] [GO:0010200 "response to chitin"
evidence=IEP;RCA] [GO:0002679 "respiratory burst involved in
defense response" evidence=RCA] [GO:0035556 "intracellular signal
transduction" evidence=RCA] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009733 GO:GO:0009734
GO:GO:0003700 GO:GO:0006351 EMBL:AC002411 GO:GO:0010200 EMBL:U18412
EMBL:AF332396 IPI:IPI00520254 PIR:S58496 RefSeq:NP_171906.1
UniGene:At.21582 IntAct:Q38828 PaxDb:Q38828 PRIDE:Q38828
EnsemblPlants:AT1G04100.1 GeneID:839290 KEGG:ath:AT1G04100
GeneFarm:3157 TAIR:At1g04100 eggNOG:NOG280843 HOGENOM:HOG000238261
InParanoid:Q38828 OMA:RTYRINS PhylomeDB:Q38828
ProtClustDB:CLSN2914368 Genevestigator:Q38828 GermOnline:AT1G04100
Uniprot:Q38828
Length = 261
Score = 105 (42.0 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 21/39 (53%), Positives = 27/39 (69%)
Query: 658 LIDGNSGFHIAYMDDEGDMMLVGDNPWQDFQCAVRRMFI 696
L+DG+S + I Y D +GD MLVGD PWQ F +V R+ I
Sbjct: 212 LLDGSSEYIITYQDKDGDWMLVGDVPWQMFLGSVTRLRI 250
Score = 79 (32.9 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 25/73 (34%), Positives = 35/73 (47%)
Query: 584 SQSSISETIQVSEPSKSVSGILSEKQCKNCYVSRSCT----KVIKFGTALGRSVDLTRFH 639
++ +S IQ E +KSV +++ K C++ S T KV G +GR VDL
Sbjct: 117 TEGGLSSGIQ-KETTKSV--VVAAKNDDACFIKSSRTSMLVKVTMDGVIIGRKVDLNALD 173
Query: 640 GYDELISELDQMF 652
Y L LD MF
Sbjct: 174 SYAALEKTLDLMF 186
>TAIR|locus:2094578 [details] [associations]
symbol:IAA2 "indole-3-acetic acid inducible 2"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009733 "response to auxin stimulus"
evidence=IEP;RCA] [GO:0010583 "response to cyclopentenone"
evidence=RCA] InterPro:IPR003311 InterPro:IPR011525 Pfam:PF02309
PROSITE:PS50962 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0009733 GO:GO:0009734 GO:GO:0003700
GO:GO:0006351 EMBL:AB026655 HOGENOM:HOG000238261
ProtClustDB:CLSN2681778 EMBL:L15449 EMBL:AF027157 EMBL:AF332392
IPI:IPI00527263 RefSeq:NP_188943.1 UniGene:At.23539 IntAct:P49678
STRING:P49678 EnsemblPlants:AT3G23030.1 GeneID:821877
KEGG:ath:AT3G23030 GeneFarm:3142 TAIR:At3g23030 eggNOG:NOG239673
InParanoid:P49678 OMA:CEREGYK PhylomeDB:P49678
Genevestigator:P49678 GermOnline:AT3G23030 Uniprot:P49678
Length = 174
Score = 126 (49.4 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 46/148 (31%), Positives = 62/148 (41%)
Query: 563 LPSPQMATSNELESPCSVPPTSQSSISETIQVSE---PSKS-VSGILSEKQCKNCYVSRS 618
LP E E C V ++ ET E P+K+ + G + + S S
Sbjct: 20 LPGRTEKIKEEQEVSC-VKSNNKRLFEETRDEEESTPPTKTQIVGWPPVRSSRKNNNSVS 78
Query: 619 CTKVIKFGTALGRSVDLTRFHGYDELISELDQMFDFN-GSLID--G--NSGFHIAYMDDE 673
KV G R +DL + Y EL+ L+ MF G + G SGF Y D +
Sbjct: 79 YVKVSMDGAPYLRKIDLKTYKNYPELLKALENMFKVMIGEYCEREGYKGSGFVPTYEDKD 138
Query: 674 GDMMLVGDNPWQDFQCAVRRMFICPKED 701
GD MLVGD PW F + +R+ I D
Sbjct: 139 GDWMLVGDVPWDMFSSSCKRLRIMKGSD 166
>TAIR|locus:2195820 [details] [associations]
symbol:IAA18 "indole-3-acetic acid inducible 18"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009733 "response
to auxin stimulus" evidence=RCA;TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0009694 "jasmonic acid metabolic process"
evidence=RCA] [GO:0009741 "response to brassinosteroid stimulus"
evidence=RCA] [GO:0009753 "response to jasmonic acid stimulus"
evidence=RCA] [GO:0048527 "lateral root development" evidence=RCA]
InterPro:IPR003311 InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0003700 GO:GO:0006351 HOGENOM:HOG000238261
KO:K14484 EMBL:AC015448 EMBL:AF367263 EMBL:AY056062 EMBL:AY088406
EMBL:U49074 IPI:IPI00534235 PIR:H96558 RefSeq:NP_175607.1
UniGene:At.16067 IntAct:O24408 STRING:O24408
EnsemblPlants:AT1G51950.1 GeneID:841623 KEGG:ath:AT1G51950
GeneFarm:3181 TAIR:At1g51950 eggNOG:NOG285609 InParanoid:O24408
OMA:MIPQERR PhylomeDB:O24408 ProtClustDB:CLSN2679451
Genevestigator:O24408 GermOnline:AT1G51950 Uniprot:O24408
Length = 267
Score = 117 (46.2 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 21/49 (42%), Positives = 31/49 (63%)
Query: 658 LIDGNSGFHIAYMDDEGDMMLVGDNPWQDFQCAVRRMFICPKEDIDGVI 706
L+DGN + + Y D+EGD MLVGD PWQ F +V+R+ + +I +
Sbjct: 207 LLDGNGEYTLTYEDNEGDKMLVGDVPWQMFVSSVKRLRVIKTSEISSAL 255
Score = 65 (27.9 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 11/32 (34%), Positives = 21/32 (65%)
Query: 621 KVIKFGTALGRSVDLTRFHGYDELISELDQMF 652
K+ +G +GR VDL+ + Y++L +D++F
Sbjct: 153 KINMYGVPIGRKVDLSAHNSYEQLSFTVDKLF 184
>TAIR|locus:2088324 [details] [associations]
symbol:PAP1 "phytochrome-associated protein 1"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009733 "response
to auxin stimulus" evidence=TAS] [GO:0006995 "cellular response to
nitrogen starvation" evidence=RCA] InterPro:IPR003311
InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009733 GO:GO:0009734
GO:GO:0003700 GO:GO:0006351 EMBL:AP000373 HOGENOM:HOG000238261
UniGene:At.16067 ProtClustDB:CLSN2679451 EMBL:AF088281
EMBL:AF332394 EMBL:AF332401 EMBL:AF386948 EMBL:AY072502
EMBL:AY087745 IPI:IPI00539954 RefSeq:NP_188271.1 UniGene:At.20072
UniGene:At.47260 IntAct:Q8LAL2 EnsemblPlants:AT3G16500.1
GeneID:820898 KEGG:ath:AT3G16500 GeneFarm:3185 TAIR:At3g16500
eggNOG:NOG303951 InParanoid:Q8LAL2 OMA:DEEDHSA PhylomeDB:Q8LAL2
Genevestigator:Q8LAL2 GermOnline:AT3G16500 Uniprot:Q8LAL2
Length = 269
Score = 115 (45.5 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 21/49 (42%), Positives = 30/49 (61%)
Query: 658 LIDGNSGFHIAYMDDEGDMMLVGDNPWQDFQCAVRRMFICPKEDIDGVI 706
L+DG F + Y D+EGD MLVGD PWQ F +V+R+ + +I +
Sbjct: 209 LLDGKGEFTLTYEDNEGDKMLVGDVPWQMFVSSVKRLRVIKSSEISSAL 257
Score = 65 (27.9 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 21/71 (29%), Positives = 36/71 (50%)
Query: 583 TSQSSI-SETIQVSEPSKSVSGILSEKQCKNCYVSRSCTKVIKFGTALGRSVDLTRFHGY 641
TS S + +E+ + +KS G EKQ + K+ G +GR VDL ++ Y
Sbjct: 120 TSSSKLGNESSHGGQINKSDDG---EKQVET-KKEGMFVKINMDGVPIGRKVDLNAYNSY 175
Query: 642 DELISELDQMF 652
++L +D++F
Sbjct: 176 EQLSFVVDKLF 186
>UNIPROTKB|Q9LG86 [details] [associations]
symbol:IAA2 "Auxin-responsive protein IAA2" species:39947
"Oryza sativa Japonica Group" [GO:0009733 "response to auxin
stimulus" evidence=IC] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0006355 GO:GO:0006351 EMBL:AP002743
EMBL:AK100314 RefSeq:NP_001042263.1 UniGene:Os.19952 GeneID:4326775
KEGG:dosa:Os01t0190300-01 KEGG:osa:4326775 Gramene:Q9LG86
eggNOG:NOG325733 OMA:KRIEHAP ProtClustDB:CLSN2691155 Uniprot:Q9LG86
Length = 238
Score = 134 (52.2 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 53/207 (25%), Positives = 84/207 (40%)
Query: 513 SVPNASSENSGSQMCMALELKDENRTPLAQPNGGSRYMLFGVNLVNSPPELPSPQMATSN 572
S ++S + GS A L+ N T ++P+G + +V PP + S+
Sbjct: 33 SSSSSSKPSEGSTAAPAFALRS-NGTNASKPSGAAA----AAPVVGWPPVRSFRRNLASS 87
Query: 573 ELESPCSVPPTSQSSISETIQVSEPSKSVSGILSEKQCKNCYVSRSCTKVIKFGTALGRS 632
S PP SS + S+ + G+ K+ G +GR
Sbjct: 88 SSSSSKQAPPPPSSSPQNGDKASKDGGAEKGMF--------------VKINMDGVPIGRK 133
Query: 633 VDLTRFHGYDELISELDQMF-----------DFN------GSLIDGNSGFHIAYMDDEGD 675
VDL + GY +L + +D++F D G ++ G + + Y DDEGD
Sbjct: 134 VDLAAYGGYAQLSAAVDKLFRGLLAAQSAAADGEADAAAAGEMVGGGE-YTLVYEDDEGD 192
Query: 676 MMLVGDNPWQDFQCAVRRMFICPKEDI 702
MLVGD PWQ F +R+ + D+
Sbjct: 193 RMLVGDVPWQMFIATAKRLRVLKSSDL 219
>UNIPROTKB|Q75GK1 [details] [associations]
symbol:IAA12 "Auxin-responsive protein IAA12" species:39947
"Oryza sativa Japonica Group" [GO:0009733 "response to auxin
stimulus" evidence=IC] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0006355 GO:GO:0006351 HOGENOM:HOG000238261
EMBL:AC145379 EMBL:AK073044 RefSeq:NP_001050714.1 UniGene:Os.9945
STRING:Q75GK1 EnsemblPlants:LOC_Os03g43410.1 GeneID:4333512
KEGG:dosa:Os03t0633800-01 KEGG:osa:4333512 Gramene:Q75GK1
eggNOG:NOG272839 OMA:TCKKLRI ProtClustDB:CLSN2694101 Uniprot:Q75GK1
Length = 226
Score = 132 (51.5 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 33/90 (36%), Positives = 47/90 (52%)
Query: 618 SCTKVIKFGTALGRSVDLTRFHGYDELISELDQMFD-FNGSLIDGN-SGFHIAYMDDEGD 675
S KV G R +DL + GY EL L+ MF F+G+ N S F I Y D +GD
Sbjct: 129 SLVKVSMDGAPYLRKIDLRMYKGYRELREALEAMFVCFSGAADGANPSEFAITYQDKDGD 188
Query: 676 MMLVGDNPWQDFQCAVRRMFICPKEDIDGV 705
+MLVGD P+ F +++ I + + G+
Sbjct: 189 LMLVGDVPFDMFTSTCKKLRIMKRSEATGL 218
>UNIPROTKB|Q6ZL57 [details] [associations]
symbol:IAA24 "Auxin-responsive protein IAA24" species:39947
"Oryza sativa Japonica Group" [GO:0009733 "response to auxin
stimulus" evidence=ISS] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0006355 GO:GO:0006351 EMBL:AP003835
EMBL:AK103483 RefSeq:NP_001059051.1 UniGene:Os.8622
EnsemblPlants:LOC_Os07g08460.1 GeneID:4342573
KEGG:dosa:Os07t0182400-01 KEGG:osa:4342573 Gramene:Q6ZL57
eggNOG:NOG284204 OMA:QHAIAYE ProtClustDB:CLSN2694400 Uniprot:Q6ZL57
Length = 219
Score = 129 (50.5 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 34/80 (42%), Positives = 44/80 (55%)
Query: 621 KVIKFGTALGRSVDLTRFHGYDELISELDQMFD--FNGSLIDGNSG--FHIAYMDDEGDM 676
KV G R VDL GY EL LD +F F+ + DG S F IAY D +GD+
Sbjct: 133 KVSMDGAPYLRKVDLKMCKGYRELREALDLLFTKCFSATASDGCSDGQFAIAYEDKDGDL 192
Query: 677 MLVGDNPWQDFQCAVRRMFI 696
MLVGD PW+ F + +++ I
Sbjct: 193 MLVGDVPWEMFISSCKKLRI 212
>UNIPROTKB|P49679 [details] [associations]
symbol:IAA4/5 "Auxin-induced protein IAA4" species:3888
"Pisum sativum" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003311 InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962
GO:GO:0005634 GO:GO:0009734 GO:GO:0006355 GO:GO:0006351 EMBL:X68215
EMBL:X68216 PIR:S39075 IntAct:P49679 Uniprot:P49679
Length = 189
Score = 125 (49.1 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 51/167 (30%), Positives = 76/167 (45%)
Query: 550 MLFGVNLVNSPPELPSPQMATSNELESPCSVPPTSQSSISETIQVSEPSKS-VSG---IL 605
++ G ++V + + PQ TS E S V T+ I E+ + P+K+ + G I
Sbjct: 23 IIHGSSVVKNNNKRQLPQ--TSEESVSISKV--TNDEHIVESSSAAPPAKAKIVGWPPIR 78
Query: 606 SEKQ--CKNCYVSRSCTKVIKFGTALGRSVDLTRFHGYDELISELDQMFDFN-G--SLID 660
S ++ V KV G R +DL + GY EL+ L+ MF G S +
Sbjct: 79 SYRKNSLHEADVGGIFVKVSMDGAPYLRKIDLRVYGGYSELLKALETMFKLTIGEYSERE 138
Query: 661 GNSGFHIA--YMDDEGDMMLVGDNPWQDFQCAVRRMFICPKEDIDGV 705
G G A Y D +GD MLVGD PW F + +R+ I + G+
Sbjct: 139 GYKGSEYAPTYEDKDGDWMLVGDVPWDMFVTSCKRLRIMKGTEAKGL 185
>UNIPROTKB|Q7Y1H8 [details] [associations]
symbol:IAA14 "Auxin-responsive protein IAA14" species:39947
"Oryza sativa Japonica Group" [GO:0009733 "response to auxin
stimulus" evidence=IC] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0006355 GO:GO:0006351 EMBL:AC093713
EMBL:AK059619 KEGG:dosa:Os03t0797800-01 Gramene:Q7Y1H8
eggNOG:NOG284674 Uniprot:Q7Y1H8
Length = 195
Score = 124 (48.7 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 39/115 (33%), Positives = 55/115 (47%)
Query: 583 TSQSSISETIQVSEPSKSVSGILSEKQCKNCYVSRSCTKVIKFGTALGRSVDLTRFHGYD 642
T QSS S T + +K G +++ KN KV G R VDL + GY
Sbjct: 78 TFQSSSSST---AAAAKGKGGGETDQGRKN-KGGGLYVKVSMDGAPYLRKVDLRMYGGYR 133
Query: 643 ELISELDQMFD-FNGSLIDGNSGFHIAYMDDEGDMMLVGDNPWQDFQCAVRRMFI 696
EL LD +F F+ + F +AY D +GD+ML GD PW F + +++ I
Sbjct: 134 ELRDALDALFGCFSADASASAAHFAVAYEDKDGDLMLAGDVPWDMFISSCKKLRI 188
>TAIR|locus:2139890 [details] [associations]
symbol:IAA11 "indole-3-acetic acid inducible 11"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009733 "response
to auxin stimulus" evidence=RCA;TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0010583
"response to cyclopentenone" evidence=RCA] InterPro:IPR003311
InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962 GO:GO:0009506
GO:GO:0005634 EMBL:CP002687 GO:GO:0009733 GO:GO:0009734
GO:GO:0003700 GO:GO:0006351 EMBL:AL161573 HOGENOM:HOG000238261
IPI:IPI00846427 RefSeq:NP_001078460.1 UniGene:At.25401
STRING:A8MR39 EnsemblPlants:AT4G28640.2 GeneID:828982
KEGG:ath:AT4G28640 OMA:RTADSMA ProtClustDB:CLSN2685745
Genevestigator:A8MR39 Uniprot:A8MR39
Length = 302
Score = 105 (42.0 bits), Expect = 7.0e-05, Sum P(2) = 7.0e-05
Identities = 23/47 (48%), Positives = 28/47 (59%)
Query: 658 LIDGNSGFHIAYMDDEGDMMLVGDNPWQDFQCAVRRMFICPKEDIDG 704
L DG+SG + Y D EGD MLVGD PW F +VRR+ I + G
Sbjct: 194 LPDGSSGLVLTYEDKEGDWMLVGDVPWGMFIGSVRRLRIMKTSEATG 240
Score = 65 (27.9 bits), Expect = 7.0e-05, Sum P(2) = 7.0e-05
Identities = 18/70 (25%), Positives = 35/70 (50%)
Query: 584 SQSSISETIQVSEPSKSVSGILSEKQCKNCYVSRSC-TKVIKFGTALGRSVDLTRFHGYD 642
+Q+ S T +P+ +S +++ + + + S KV G +GR +DL Y+
Sbjct: 105 NQAKASAT---EDPNLEISQAVNKNRSDSTKMRNSMFVKVTMDGIPIGRKIDLNAHKCYE 161
Query: 643 ELISELDQMF 652
L + L++MF
Sbjct: 162 SLSNTLEEMF 171
>UNIPROTKB|Q5VRR0 [details] [associations]
symbol:IAA20 "Auxin-responsive protein IAA20" species:39947
"Oryza sativa Japonica Group" [GO:0009733 "response to auxin
stimulus" evidence=IC] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0006355 GO:GO:0006351 HOGENOM:HOG000238261
EMBL:AB023482 EMBL:AP002536 EMBL:AK102541 RefSeq:NP_001056915.2
UniGene:Os.15798 STRING:Q5VRR0 EnsemblPlants:LOC_Os06g07040.1
GeneID:4340245 KEGG:dosa:Os06t0166500-01 KEGG:osa:4340245
Gramene:Q5VRR0 eggNOG:NOG246219 OMA:KCARRRS ProtClustDB:CLSN2695987
Uniprot:Q5VRR0
Length = 183
Score = 118 (46.6 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 31/81 (38%), Positives = 42/81 (51%)
Query: 621 KVIKFGTALGRSVDLTRFHGYDELISELDQMFDFNGSLIDGNSG-----FHIAYMDDEGD 675
KV G A+GR +DL+ Y EL+ L MF DG+ + + Y D EGD
Sbjct: 102 KVKMEGLAIGRKLDLSILGSYAELLDTLHLMFPSTNQE-DGHDRRRRHPYAVTYEDGEGD 160
Query: 676 MMLVGDNPWQDFQCAVRRMFI 696
M VGD PW+ F +V+R+ I
Sbjct: 161 WMQVGDVPWEAFAKSVKRLKI 181
>TAIR|locus:2116592 [details] [associations]
symbol:HSL1 "HSI2-like 1" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;RCA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0010030 "positive regulation of seed
germination" evidence=IGI] [GO:2000034 "regulation of seed
maturation" evidence=IGI] [GO:0007062 "sister chromatid cohesion"
evidence=RCA] [GO:0009630 "gravitropism" evidence=RCA] [GO:0009790
"embryo development" evidence=RCA] [GO:0009880 "embryonic pattern
specification" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010431 "seed maturation" evidence=RCA]
[GO:0010564 "regulation of cell cycle process" evidence=RCA]
[GO:0043687 "post-translational protein modification" evidence=RCA]
[GO:0045595 "regulation of cell differentiation" evidence=RCA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA] [GO:0048316 "seed development" evidence=RCA]
[GO:0048366 "leaf development" evidence=RCA] [GO:0048825 "cotyledon
development" evidence=RCA] [GO:0051301 "cell division"
evidence=RCA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003340 InterPro:IPR011124 Pfam:PF02362 Pfam:PF07496
PROSITE:PS50863 PROSITE:PS51050 SMART:SM01019 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872 GO:GO:0003677
GO:GO:0010030 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
EMBL:AL021636 EMBL:AL161580 HSSP:Q9ZWM9 eggNOG:NOG244543
HOGENOM:HOG000084353 GO:GO:2000034 EMBL:AB206554 EMBL:AK228013
IPI:IPI00541402 IPI:IPI00931064 PIR:T04644 RefSeq:NP_194929.2
UniGene:At.1885 ProteinModelPortal:Q5CCK4 SMR:Q5CCK4 STRING:Q5CCK4
PaxDb:Q5CCK4 PRIDE:Q5CCK4 EnsemblPlants:AT4G32010.1 GeneID:829332
KEGG:ath:AT4G32010 TAIR:At4g32010 InParanoid:Q5CCK4 OMA:MNALCGA
PhylomeDB:Q5CCK4 ProtClustDB:CLSN2918602 Genevestigator:Q5CCK4
Uniprot:Q5CCK4
Length = 780
Score = 130 (50.8 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 46/152 (30%), Positives = 72/152 (47%)
Query: 121 LLPR--PEI-DELSLEV-GNSPPLPPKLNVCSFSKKLTPSDTSTHGGFSVPKRHADECLP 176
LLPR P I D+ L++ G P L + F K L+ SD G +PK A+ P
Sbjct: 254 LLPRYWPRITDQELLQLSGQYPHLSNSKIIPLFEKVLSASDAGRIGRLVLPKACAEAYFP 313
Query: 177 PLDMSKDPPLQELVAKDLHGLEWRFR-HIYRGQPKRHLLTSGWSVFVTSKKLVAGDVCIF 235
P+ + + PL+ +D+ G EW F+ + R + G + + S +L AGD F
Sbjct: 314 PISLPEGLPLK---IQDIKGKEWVFQFRFWPNNNSRMYVLEGVTPCIQSMQLQAGDTVTF 370
Query: 236 LRGG-DGELRVGVRRAMKLQNNASTSVISSLS 266
R +G+L +G R+A N+ +T + S
Sbjct: 371 SRTEPEGKLVMGYRKAT---NSTATQMFKGSS 399
Score = 47 (21.6 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 19/78 (24%), Positives = 33/78 (42%)
Query: 352 EWRCLKVKWDATTDSITRPARVSPWNIEPIERTHK---RPASVQHQQKRLRPNDASSPWF 408
+W C D S + P +SP + + R K R +K + DAS+
Sbjct: 542 KWSCSDNLLDPGRSSCSAPDELSPREQDTLVRQSKEFKRRRLASSNEKLNQSQDASA--L 599
Query: 409 SSLFSNGVFQ-GQENRVT 425
+SL + G+ G++ +T
Sbjct: 600 NSLGNAGITTTGEQGEIT 617
>ZFIN|ZDB-GENE-050208-261 [details] [associations]
symbol:phip "pleckstrin homology domain interacting
protein" species:7955 "Danio rerio" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR017986
InterPro:IPR001487 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR017956 Pfam:PF00400 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00297
SMART:SM00320 SMART:SM00384 ZFIN:ZDB-GENE-050208-261
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003677
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GeneTree:ENSGT00700000104382 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:CR759802 EMBL:CR735144 IPI:IPI00634562
Ensembl:ENSDART00000138106 Bgee:E9QJ97 Uniprot:E9QJ97
Length = 1805
Score = 104 (41.7 bits), Expect = 0.00024, Sum P(3) = 0.00024
Identities = 38/136 (27%), Positives = 58/136 (42%)
Query: 281 TGTRFTVYYHPWTRPAEFLVPFSQYMKSAEIDYSIGTRFRMVFEGEECADQRIAGTVVGT 340
TG F++ YH +FLV Q+ + + ++ IG RFR V + D GT+
Sbjct: 1020 TGGSFSIKYHDMPDVIDFLVLRQQFDNARQRNWMIGDRFRAVID-----DAWWFGTIESQ 1074
Query: 341 EDVDHIRWPASEWRCLKVKWDATTDSITRPARVSPWNIEPI-------ERTHKRPASVQH 393
E +P S ++C V WD D+ ++SPW++E + E A Q
Sbjct: 1075 EPYQ-AEYPDSLFQCYNVCWD-NGDT----EKMSPWDMEEVPDEVVFPEELGLSMALTQD 1128
Query: 394 QQKRLRPNDASSPWFS 409
+QK L W S
Sbjct: 1129 EQKALLYKPLDGEWGS 1144
Score = 85 (35.0 bits), Expect = 0.00024, Sum P(3) = 0.00024
Identities = 35/105 (33%), Positives = 48/105 (45%)
Query: 6 EEG-KASGSRRMAAHHRKHMDDALPTKHKPAEAGGK-NELYNE-L---------WRACAG 53
E+G K S++ + D ALP K KP E + EL N+ L W
Sbjct: 877 EDGEKKKDSKKERRKEKPDKDGALPKKKKPKEKRKRIPELQNQGLTLEEWLPSNWITDTM 936
Query: 54 P--LVYVPRVGDIVYYFLQGHMEQVEAYNSQDDKAELPIYNLPPK 96
P + P++GD VYYF QGH EAY K + I+++ PK
Sbjct: 937 PRRCPFTPQMGDEVYYFRQGH----EAYVEMAKKNK--IFSINPK 975
Score = 42 (19.8 bits), Expect = 0.00024, Sum P(3) = 0.00024
Identities = 19/68 (27%), Positives = 24/68 (35%)
Query: 400 PNDASSPWFSSLFSNGVFQGQENRVTGVKALGAAKTPLLPSLVRPPNPVWAQMQSGLENK 459
P D SSP +SL NG Q V + T + + PP P+ E K
Sbjct: 1586 PVDHSSPPQNSLHLNGHSQVTVGMVRRGRGRPRLDTQIETPVDTPPPPLPKTSSKKKERK 1645
Query: 460 LKFPMHDP 467
K P
Sbjct: 1646 SKKDTESP 1653
>TAIR|locus:2034200 [details] [associations]
symbol:IAA15 "indole-3-acetic acid inducible 15"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009733 "response
to auxin stimulus" evidence=TAS] InterPro:IPR003311
InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009733 GO:GO:0009734
GO:GO:0003700 GO:GO:0006351 EMBL:AC018848 HOGENOM:HOG000238261
EMBL:AJ441300 IPI:IPI00525123 PIR:F96835 PIR:S58502
RefSeq:NP_178155.1 UniGene:At.33908 IntAct:Q9C966
EnsemblPlants:AT1G80390.1 GeneID:844379 KEGG:ath:AT1G80390
GeneFarm:3170 TAIR:At1g80390 eggNOG:NOG283386 InParanoid:Q9C966
OMA:FTALENM PhylomeDB:Q9C966 ProtClustDB:CLSN2914430
Genevestigator:Q9C966 Uniprot:Q9C966
Length = 179
Score = 114 (45.2 bits), Expect = 0.00025, P = 0.00025
Identities = 32/96 (33%), Positives = 46/96 (47%)
Query: 615 VSRSCTKVIKFGTALGRSVDLTRFHGYDELISELDQMFDFNGSL-----IDGNSGFHIAY 669
V R KV G A R VDL + Y +L + L+ MF ++ ++ F Y
Sbjct: 84 VRRKYVKVALDGAAYLRKVDLGMYDCYGQLFTALENMFQGIITICRVTELERKGEFVATY 143
Query: 670 MDDEGDMMLVGDNPWQDFQCAVRRMFICPKEDIDGV 705
D +GD+MLVGD PW F + +RM + D G+
Sbjct: 144 EDKDGDLMLVGDVPWMMFVESCKRMRLMKTGDAIGL 179
>UNIPROTKB|Q8LQ74 [details] [associations]
symbol:IAA6 "Auxin-responsive protein IAA6" species:39947
"Oryza sativa Japonica Group" [GO:0006417 "regulation of
translation" evidence=ISS] [GO:0009733 "response to auxin stimulus"
evidence=IC] InterPro:IPR003311 InterPro:IPR011525 Pfam:PF02309
PROSITE:PS50962 GO:GO:0005634 GO:GO:0009733 GO:GO:0006417
GO:GO:0009734 GO:GO:0006355 GO:GO:0006351 HOGENOM:HOG000238261
ProtClustDB:CLSN2691827 eggNOG:NOG303951 EMBL:AP003768
EMBL:AK068600 RefSeq:NP_001044208.1 UniGene:Os.75606 STRING:Q8LQ74
DNASU:4326541 EnsemblPlants:LOC_Os01g53880.2
EnsemblPlants:LOC_Os01g53880.3 EnsemblPlants:LOC_Os01g53880.4
EnsemblPlants:LOC_Os01g53880.5 EnsemblPlants:LOC_Os01g53880.6
GeneID:4326541 KEGG:dosa:Os01t0741900-01 KEGG:osa:4326541
Gramene:Q8LQ74 Uniprot:Q8LQ74
Length = 335
Score = 98 (39.6 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 17/45 (37%), Positives = 27/45 (60%)
Query: 658 LIDGNSGFHIAYMDDEGDMMLVGDNPWQDFQCAVRRMFICPKEDI 702
L+DG+ + + Y D EGD MLVGD PW+ F +R+ + ++
Sbjct: 280 LLDGSGEYTLVYEDSEGDRMLVGDVPWKVFVSTAKRLRVLRSSEL 324
Score = 68 (29.0 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 16/46 (34%), Positives = 26/46 (56%)
Query: 612 NCYVSRSCTK--VIKF---GTALGRSVDLTRFHGYDELISELDQMF 652
N V+ +C K ++K G +GR +DL ++ YD L S + Q+F
Sbjct: 207 NAKVTLTCKKNPLVKINMDGIPIGRKIDLAAYNSYDGLSSAVKQLF 252
>UNIPROTKB|F1N8L6 [details] [associations]
symbol:BRWD3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0007010 "cytoskeleton organization" evidence=IEA]
[GO:0008360 "regulation of cell shape" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001487 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00297
SMART:SM00320 GO:GO:0007010 Gene3D:2.130.10.10 PROSITE:PS00678
GO:GO:0008360 InterPro:IPR019775 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GeneTree:ENSGT00700000104382
OMA:MTGNNLP InterPro:IPR011044 SUPFAM:SSF50969 EMBL:AADN02013450
EMBL:AADN02013451 IPI:IPI00578454 Ensembl:ENSGALT00000011586
Uniprot:F1N8L6
Length = 1495
Score = 119 (46.9 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 33/111 (29%), Positives = 50/111 (45%)
Query: 281 TGTRFTVYYHPWTRPAEFLVPFSQYMKSAEIDYSIGTRFRMVFEGEECADQRIAGTVVGT 340
TG F++ YH +FLV Y ++ E ++ IG RFR + + D GTV
Sbjct: 959 TGESFSIKYHDMPDVIDFLVLHQFYNEAKERNWQIGDRFRSIID-----DAWWFGTVESQ 1013
Query: 341 EDVDHIRWPASEWRCLKVKWDATTDSITRPARVSPWNIEPIERTHKRPASV 391
+ +P S ++C V WD ++SPW++EPI P V
Sbjct: 1014 QPFQ-AEYPDSSFQCYSVHWDNNERE-----KMSPWDMEPIPEGTAYPEEV 1058
Score = 62 (26.9 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 15/37 (40%), Positives = 22/37 (59%)
Query: 57 YVPRVGDIVYYFLQGHMEQVEAYNSQDDKAELPIYNL 93
+VP++GD + YF QGH EAY KA++ N+
Sbjct: 881 FVPQMGDEIIYFRQGH----EAYVRAVRKAKIYSINM 913
>UNIPROTKB|Q6AT10 [details] [associations]
symbol:IAA15 "Auxin-responsive protein IAA15" species:39947
"Oryza sativa Japonica Group" [GO:0009733 "response to auxin
stimulus" evidence=IC] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0006355 GO:GO:0006351 HOGENOM:HOG000238261
EMBL:AC144738 EMBL:AK061796 RefSeq:NP_001054800.1 UniGene:Os.4822
EnsemblPlants:LOC_Os05g08570.2 GeneID:4337971
KEGG:dosa:Os05t0178600-01 KEGG:osa:4337971 Gramene:Q6AT10
eggNOG:NOG312815 ProtClustDB:CLSN2691128 Uniprot:Q6AT10
Length = 212
Score = 114 (45.2 bits), Expect = 0.00059, P = 0.00059
Identities = 57/219 (26%), Positives = 96/219 (43%)
Query: 511 NLSVPNASSENSGSQMCMALELKDENRTPLAQPNGGSRYMLFGVNLVNSPPELPSPQMAT 570
++ +S+E+S + L+ +D T L P S + +S P P + A+
Sbjct: 2 SVETERSSTESSAAS---GLDFEDTALT-LRLPGSSSSSSSSSSSSSSSSPSEPDRKRAS 57
Query: 571 S------NELESPCSV-PPTSQSSISETIQVSEPSKS-VSGILSEKQCKNCYVSRSCTKV 622
+ N L S + PP+ ++ + V K+ ++ + + K +V KV
Sbjct: 58 ATDDDPDNRLGSTATESPPSPKARVVGWPPVRAFRKNALAALAAASSSKAKFV-----KV 112
Query: 623 IKFGTALGRSVDLTRFHGYDELISEL-DQMFD-FN----GS----LIDGNSG--FHIAYM 670
G R VDL + GYD+L++ L D+ F F G+ L+D SG + Y
Sbjct: 113 AVDGAPYLRKVDLEAYRGYDQLLAALQDKFFSHFTIRKLGNEEMKLVDAVSGNEYVPTYE 172
Query: 671 DDEGDMMLVGDNPWQDFQCAVRRMFICPKEDIDGVIPSS 709
D +GD MLVGD PW+ F +R+ + + + P S
Sbjct: 173 DKDGDWMLVGDVPWKMFVETCQRLRLMKSSEAVNLAPRS 211
>UNIPROTKB|Q75GB1 [details] [associations]
symbol:IAA17 "Auxin-responsive protein IAA17" species:39947
"Oryza sativa Japonica Group" [GO:0009733 "response to auxin
stimulus" evidence=ISS] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0006355 GO:GO:0006351 HOGENOM:HOG000238261
EMBL:AC145396 EMBL:AC145477 EMBL:AK106192
EnsemblPlants:LOC_Os05g14180.1 KEGG:dosa:Os05t0230700-01
Gramene:Q75GB1 eggNOG:NOG266390 OMA:CKKLKIM Uniprot:Q75GB1
Length = 257
Score = 116 (45.9 bits), Expect = 0.00062, P = 0.00062
Identities = 34/93 (36%), Positives = 47/93 (50%)
Query: 621 KVIKFGTALGRSVDLTRFHGYDELISELDQMFDFNGSLIDGNS-----GFHI-AYMDDEG 674
KV G R VDL + Y +L + L++MF + DG S G ++ Y D +G
Sbjct: 155 KVSMDGAPYLRKVDLKTYKNYKDLSTALEKMFIGFTTGKDGLSESRKDGEYVLTYEDKDG 214
Query: 675 DMMLVGDNPWQDFQCAVRRMFICPKEDIDGVIP 707
D MLVGD PW+ F + RR+ I D G+ P
Sbjct: 215 DWMLVGDVPWEMFANSCRRLRIMKGSDAIGLAP 247
>ZFIN|ZDB-GENE-041111-120 [details] [associations]
symbol:brwd1 "bromodomain and WD repeat domain
containing 1" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001487 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00297
SMART:SM00320 ZFIN:ZDB-GENE-041111-120 Gene3D:2.130.10.10
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR011047
SUPFAM:SSF50998 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GeneTree:ENSGT00700000104382 EMBL:BX088654
EMBL:CT573306 IPI:IPI00898300 Ensembl:ENSDART00000115034
Uniprot:E7F145
Length = 2008
Score = 107 (42.7 bits), Expect = 0.00075, Sum P(2) = 0.00075
Identities = 32/110 (29%), Positives = 51/110 (46%)
Query: 281 TGTRFTVYYHPWTRPAEFLVPFSQYMKSAEIDYSIGTRFRMVFEGEECADQRIAGTVVGT 340
T F++ YH +FLV Y ++ ++ RFR V + D G +V
Sbjct: 866 TDRTFSIKYHDMADVIDFLVLRQSYDEARNRVWTSNDRFRSVID-----DAWWFGAIVCH 920
Query: 341 EDVDHIRWPASEWRCLKVKWDATTDSITRPARVSPWNIEPIERTHKRPAS 390
E +P S ++C KVKWD + T ++SPW++E I ++P S
Sbjct: 921 EPYQS-EYPDSHFQCFKVKWD---NGETE--KLSPWDVEAIPENAEQPES 964
Score = 73 (30.8 bits), Expect = 0.00075, Sum P(2) = 0.00075
Identities = 26/80 (32%), Positives = 34/80 (42%)
Query: 6 EEGKASGSRRMAAHHRKHMDDALPT-KHKPAEAGGKNELYNEL----WRACAGPLV--YV 58
+E A G ++ RKH T KH E+ NE W P +V
Sbjct: 731 DEEPAVGEEETSSP-RKHKKAKSKTPKHSKPRPSINREISNEFRPPAWITDVVPRKSPFV 789
Query: 59 PRVGDIVYYFLQGHMEQVEA 78
P++GD V YF QGH V+A
Sbjct: 790 PQMGDEVIYFRQGHEAYVDA 809
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.133 0.413 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 716 716 0.00084 121 3 11 22 0.42 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 63
No. of states in DFA: 625 (66 KB)
Total size of DFA: 409 KB (2197 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 67.27u 0.15s 67.42t Elapsed: 00:00:02
Total cpu time: 67.28u 0.16s 67.44t Elapsed: 00:00:02
Start: Sat May 11 05:48:29 2013 End: Sat May 11 05:48:31 2013