BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 005060
         (716 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q5JK20|ARFD_ORYSJ Auxin response factor 4 OS=Oryza sativa subsp. japonica GN=ARF4
           PE=2 SV=1
          Length = 808

 Score =  525 bits (1351), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 325/764 (42%), Positives = 440/764 (57%), Gaps = 111/764 (14%)

Query: 43  LYNELWRACAGPLVYVPRVGDIVYYFLQGHMEQVEAYNSQDDKAELPIYNLPPKILCEVV 102
           LY+ELW ACAGPLV VPRVGD+V+YF QGH+EQVEA  +Q   +++ +Y+LP K+LC V+
Sbjct: 21  LYDELWHACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVADSQMRLYDLPSKLLCRVL 80

Query: 103 YAQLKAEPGTDEVFAQITLLPRPEIDELSLE--VGNSPPLPPKLNVCSFSKKLTPSDTST 160
             +LKAE  TDEV+AQ+ L+P PE +E+++E     S P+  +  V SF K LT SDTST
Sbjct: 81  NVELKAEQDTDEVYAQVMLMPEPEQNEMAVEKTTPTSGPVQARPPVRSFCKTLTASDTST 140

Query: 161 HGGFSVPKRHADECLPPLDMSKDPPLQELVAKDLHGLEWRFRHIYRGQPKRHLLTSGWSV 220
           HGGFSV +RHADECLPPLDM++ PP QELVAKDLH ++WRFRHI+RGQP+RHLL SGWSV
Sbjct: 141 HGGFSVLRRHADECLPPLDMTQSPPTQELVAKDLHSMDWRFRHIFRGQPRRHLLQSGWSV 200

Query: 221 FVTSKKLVAGDVCIFLRGGDGELRVGVRRAMKLQNNASTSVISSLSMQHGILAGAFHAIS 280
           FV+SK+LVAGD  IFLRG +GELRVGVRRAM+  +N  +SVISS SM  G+LA A+HAI+
Sbjct: 201 FVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQLSNVPSSVISSQSMHLGVLATAWHAIN 260

Query: 281 TGTRFTVYYHPWTRPAEFLVPFSQYMKSAEIDYSIGTRFRMVFEGEECADQRIAGTVVGT 340
           T + FTVYY P T P+EF++P+ QYM+S + +YS+G RFRM FEGEE  +QR  GT++G+
Sbjct: 261 TKSMFTVYYKPRTSPSEFIIPYDQYMESVKNNYSVGMRFRMRFEGEEAPEQRFTGTIIGS 320

Query: 341 EDVDHIRWPASEWRCLKVKWDATT-----DSIT----RPARVSPWNIEPIERTHK----- 386
           E++D + WP S WR LKV+WD  +     D ++     PA   P N  P+ R  +     
Sbjct: 321 ENLDPV-WPESSWRSLKVRWDEPSTIPRPDRVSPWKIEPASSPPVNPLPLSRVKRPRPNA 379

Query: 387 ---RPASVQHQQKRLRPNDASSPWFSSLFSNGVFQGQE-------------NRVTGVKAL 430
               P S    ++     D          ++ V QGQE             + VT  K +
Sbjct: 380 PPASPESPILTKEAATKVDTDPAQAQRSQNSTVLQGQEQMTLRSNLTESNDSDVTAHKPM 439

Query: 431 ------GAAKTPLLPSLVRPPNPVWAQM----------QSGLE---NKLKFPMHDPFYMC 471
                  AAK   L    RPP   W Q+          +SG +   +   F M + F   
Sbjct: 440 MWSPSPNAAKAHPLTFQQRPPMDNWMQLGRRETDFKDVRSGSQSFGDSPGFFMQN-FDEA 498

Query: 472 LNRMVSLPGGSLMSPGLSNHWPASPF-----APYEVCETAAQ----SKNLSVPNASS--- 519
            NR+ S         G + H+ + P+      P    E++ Q    SK L   N  S   
Sbjct: 499 PNRLTSF-KNQFQDQGSARHF-SDPYYYVSPQPSLTVESSTQMHTDSKELHFWNGQSTVY 556

Query: 520 -------------ENSGSQMCMALELKDENRT--PLA-------QPNGGSRYMLFG--VN 555
                        +NS S +  +    ++ R   P A       +   GS + +FG  V+
Sbjct: 557 GNSRDRPQNFRFEQNSSSWLNQSFARPEQPRVIRPHASIAPVELEKTEGSGFKIFGFKVD 616

Query: 556 LVNSPPELPSPQMATSNE--LESPCSVPPTSQSSISETIQVSEPSKSVSGILSEK----- 608
             N+P    S  MA ++E  L++P S+   +Q    +T  + E S S +G  +E      
Sbjct: 617 TTNAPNNHLSSPMAATHEPMLQTPSSL---NQLQPVQTDCIPEVSVSTAGTATENEKSGQ 673

Query: 609 ---------QCKNCYVS-RSCTKVIKFGTALGRSVDLTRFHGYDELISELDQMFDFNGSL 658
                    Q K    S RSCTKV K G ALGRSVDL++F  YDEL +ELD+MF+F+G L
Sbjct: 674 QAQQSSKDVQSKTQVASTRSCTKVHKQGVALGRSVDLSKFSNYDELKAELDKMFEFDGEL 733

Query: 659 IDGNSGFHIAYMDDEGDMMLVGDNPWQDFQCAVRRMFICPKEDI 702
           +  N  + I Y D+EGDMMLVGD+PW++F   VR+++I  KE++
Sbjct: 734 VSSNKNWQIVYTDNEGDMMLVGDDPWEEFCSIVRKIYIYTKEEV 777


>sp|Q6YVY0|ARFG_ORYSJ Auxin response factor 7 OS=Oryza sativa subsp. japonica GN=ARF7
           PE=2 SV=1
          Length = 678

 Score =  498 bits (1282), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 301/687 (43%), Positives = 407/687 (59%), Gaps = 79/687 (11%)

Query: 41  NELYNELWRACAGPLVYVPRVGDIVYYFLQGHMEQVEAYNSQDDKAELPIYNLPPKILCE 100
           + LY ELW ACAGPLV VPR G++VYYF QGHMEQ+EA   Q     LP++NLP KILC+
Sbjct: 21  DALYRELWHACAGPLVTVPRQGELVYYFPQGHMEQLEASTDQQLDQHLPLFNLPSKILCK 80

Query: 101 VVYAQLKAEPGTDEVFAQITLLPRPEIDELSLEVGNSPPLPPKLNVCSFSKKLTPSDTST 160
           VV  +L+AE  +DEV+AQI L P  + +EL+      P  P K NV SF K LT SDTST
Sbjct: 81  VVNVELRAETDSDEVYAQIMLQPEADQNELT-SPKPEPHEPEKCNVHSFCKTLTASDTST 139

Query: 161 HGGFSVPKRHADECLPPLDMSKDPPLQELVAKDLHGLEWRFRHIYRGQPKRHLLTSGWSV 220
           HGGFSV +RHA+ECLPPLDM+++PP QELVA+DLHG EW FRHI+RGQP+RHLLT+GWSV
Sbjct: 140 HGGFSVLRRHAEECLPPLDMTQNPPWQELVARDLHGNEWHFRHIFRGQPRRHLLTTGWSV 199

Query: 221 FVTSKKLVAGDVCIFLRGGDGELRVGVRRAMKLQNNASTSVISSLSMQHGILAGAFHAIS 280
           FV+SK+LVAGD  IFLRG +GELRVGVRR M+  NN  +SVISS SM  G+LA A HAIS
Sbjct: 200 FVSSKRLVAGDAFIFLRGENGELRVGVRRLMRQLNNMPSSVISSHSMHLGVLATASHAIS 259

Query: 281 TGTRFTVYYHPWTRPAEFLVPFSQYMKSAEIDYSIGTRFRMVFEGEECADQRIAGTVVGT 340
           TGT F+V+Y P T  +EF+V  ++Y+++     S+G RF+M FEG+E  ++R +GT++G 
Sbjct: 260 TGTLFSVFYKPRTSQSEFVVSANKYLEAKNSKISVGMRFKMRFEGDEAPERRFSGTIIGV 319

Query: 341 EDVDHIRWPASEWRCLKVKWDATTDSITRPARVSPWNIEPIERTHKRPA-SVQHQQKRLR 399
             +    W  S+WR LKV+WD  +  + RP RVSPW +EP+  ++ +P+     + KR R
Sbjct: 320 GSMSTSPWANSDWRSLKVQWDEPS-VVPRPDRVSPWELEPLAVSNSQPSPQPPARNKRAR 378

Query: 400 P--NDASSPWFSSLFSNGVFQGQENRVTGVKALGAAKT-PLLPSLVRPPNPVWA-QMQSG 455
           P  +++ +P    +F  G+++       G    G  +T  L PS    PNP+++  +  G
Sbjct: 379 PPASNSIAPELPPVF--GLWKSSAESTQGFSFSGLQRTQELYPS---SPNPIFSTSLNVG 433

Query: 456 LENKLKFPMHDPFYMCLNRMVSLPGGSLMSPGLSN---HWPASPFAPYEVCETAAQSKNL 512
              K     ++P                    LSN   +WP        + ET A S + 
Sbjct: 434 FSTK-----NEP------------------SALSNKHFYWP--------MRETRANSYSA 462

Query: 513 SVPNASSENSGSQMCMALELKDENRTPLAQPNGGSRYMLFGVNLVNSPPELPSPQMATSN 572
           S+    SE            K E  +       G R  LFG+  ++S  E  SP  A S 
Sbjct: 463 SISKVPSEK-----------KQEPSS------AGCR--LFGIE-ISSAVEATSPLAAVSG 502

Query: 573 ELESPCSVPPTSQSSISETIQVSEPSK-------SVSGILSEKQCKNCYVSRSCTKVIKF 625
             +   +      S  +E+ Q+S+PS        + S   S  + ++  V RSCTKVI  
Sbjct: 503 VGQDQPAA-----SVDAESDQLSQPSHANKSDAPAASSEPSPHETQSRQV-RSCTKVIMQ 556

Query: 626 GTALGRSVDLTRFHGYDELISELDQMFDFNGSLIDGNSGFHIAYMDDEGDMMLVGDNPWQ 685
           G A+GR+VDLTR HGYD+L  +L++MFD  G L      + + Y DDE DMMLVGD+PW 
Sbjct: 557 GMAVGRAVDLTRLHGYDDLRCKLEEMFDIQGELSASLKKWKVVYTDDEDDMMLVGDDPWP 616

Query: 686 DFQCAVRRMFICPKEDIDGVIPSSPNP 712
           +F   V+R++I   E+   + P S  P
Sbjct: 617 EFCSMVKRIYIYTYEEAKQLTPKSKLP 643


>sp|Q8L7G0|ARFA_ARATH Auxin response factor 1 OS=Arabidopsis thaliana GN=ARF1 PE=1 SV=2
          Length = 665

 Score =  474 bits (1221), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 287/686 (41%), Positives = 386/686 (56%), Gaps = 65/686 (9%)

Query: 30  TKHKPAEAGG--KNELYNELWRACAGPLVYVPRVGDIVYYFLQGHMEQVEAYNSQDDKAE 87
           + H   + GG   + L  ELW ACAGPLV +PR G+ VYYF +GHMEQ+EA   Q  + +
Sbjct: 4   SNHSSGKPGGVLSDALCRELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLEQQ 63

Query: 88  LPIYNLPPKILCEVVYAQLKAEPGTDEVFAQITLLPRPEIDELSLEVGNSP-PLPPKLNV 146
           +P +NLP KILC+V+  Q +AEP TDEV+AQITLLP  E+D+      ++P   P K  V
Sbjct: 64  MPSFNLPSKILCKVINIQRRAEPETDEVYAQITLLP--ELDQSEPTSPDAPVQEPEKCTV 121

Query: 147 CSFSKKLTPSDTSTHGGFSVPKRHADECLPPLDMSKDPPLQELVAKDLHGLEWRFRHIYR 206
            SF K LT SDTSTHGGFSV +RHAD+CLPPLDMS+ PP QELVA DLH  EW FRHI+R
Sbjct: 122 HSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNSEWHFRHIFR 181

Query: 207 GQPKRHLLTSGWSVFVTSKKLVAGDVCIFLRGGDGELRVGVRRAMKLQNNASTSVISSLS 266
           GQP+RHLLT+GWSVFV+SKKLVAGD  IFLRG + ELRVGVRR M+ Q N  +SVISS S
Sbjct: 182 GQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVISSHS 241

Query: 267 MQHGILAGAFHAISTGTRFTVYYHPWTRPAEFLVPFSQYMKSAEIDYSIGTRFRMVFEGE 326
           M  G+LA A HAI+TGT F+V+Y P T  +EF+V  ++Y+++     S+G RF+M FEGE
Sbjct: 242 MHIGVLATAAHAITTGTIFSVFYKPRTSRSEFIVSVNRYLEAKTQKLSVGMRFKMRFEGE 301

Query: 327 ECADQRIAGTVVGTEDVDHIRWPASEWRCLKVKWDATTDSITRPARVSPWNIEPIERTHK 386
           E  ++R +GT+VG ++     W  SEWR LKV+WD  + S+ RP RVSPW +EP+     
Sbjct: 302 EAPEKRFSGTIVGVQENKSSVWHDSEWRSLKVQWDEPS-SVFRPERVSPWELEPLVANST 360

Query: 387 RPASVQ--HQQKRLRPNDASSPWFSSLFSNGVFQGQENRVTGVKALGAAKTPLLPSLVRP 444
             +  Q   + KR RP    SP                  TG            PS    
Sbjct: 361 PSSQPQPPQRNKRPRPPGLPSP-----------------ATG------------PSGPVT 391

Query: 445 PNPVWAQMQSGLENKLKFPMHDPFYMCLNRMVSLPGGSLMSPGLS---NHWPASPFAPYE 501
           P+ VW       ++    P   P +    +  +   G   S G+S     WP +      
Sbjct: 392 PDGVW-------KSPADTPSSVPLFSPPAKAATFGHGGNKSFGVSIGSAFWPTN------ 438

Query: 502 VCETAAQSKNLSVPNASSENSGSQMCMALELKDENRTPLAQPNGGSRYMLFGVNLVNSPP 561
             ++AA+S   +  N S+E   +   +      E    +      S   + G   V+ P 
Sbjct: 439 -ADSAAESFASAFNNESTEKKQTNGNVCRLFGFELVENVNVDECFSAASVSGAVAVDQP- 496

Query: 562 ELPSPQMATSNELESPCSVPPTSQSSISETIQVSEPSKSVSGILSEKQCKNCYVSRSCTK 621
                    SNE +S     P + +         +P KS      E Q +     RSCTK
Sbjct: 497 -------VPSNEFDSGQQSEPLNINQSDIPSGSGDPEKSSLRSPQESQSRQI---RSCTK 546

Query: 622 VIKFGTALGRSVDLTRFHGYDELISELDQMFDFNGSLIDGNSGFHIAYMDDEGDMMLVGD 681
           V   G+A+GR++DLTR   Y++L  +L++MFD  G L++    + + Y DDE DMM+VGD
Sbjct: 547 VHMQGSAVGRAIDLTRSECYEDLFKKLEEMFDIKGELLESTKKWQVVYTDDEDDMMMVGD 606

Query: 682 NPWQDFQCAVRRMFICPKEDIDGVIP 707
           +PW +F   VR++FI   E++  + P
Sbjct: 607 DPWNEFCGMVRKIFIYTPEEVKKLSP 632


>sp|Q94JM3|ARFB_ARATH Auxin response factor 2 OS=Arabidopsis thaliana GN=ARF2 PE=1 SV=2
          Length = 859

 Score =  470 bits (1209), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 233/377 (61%), Positives = 273/377 (72%), Gaps = 15/377 (3%)

Query: 4   VGEEGKASGSRRMAAHHRKHMDDALPTKHKPAEAGGKNELYNELWRACAGPLVYVPRVGD 63
           V  EG+ S S R AA  R    +A               LY ELW ACAGPLV VPR  D
Sbjct: 33  VAGEGQKSNSTRSAAAERALDPEAA--------------LYRELWHACAGPLVTVPRQDD 78

Query: 64  IVYYFLQGHMEQVEAYNSQDDKAELPIYNLPPKILCEVVYAQLKAEPGTDEVFAQITLLP 123
            V+YF QGH+EQVEA  +Q  + ++P+Y+LP K+LC V+   LKAE  TDEV+AQITLLP
Sbjct: 79  RVFYFPQGHIEQVEASTNQAAEQQMPLYDLPSKLLCRVINVDLKAEADTDEVYAQITLLP 138

Query: 124 RPEIDELSLEVGNSPPLPPKLNVCSFSKKLTPSDTSTHGGFSVPKRHADECLPPLDMSKD 183
               DE ++E     P PP+  V SF K LT SDTSTHGGFSV +RHADECLPPLDMS+ 
Sbjct: 139 EANQDENAIEKEAPLPPPPRFQVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQ 198

Query: 184 PPLQELVAKDLHGLEWRFRHIYRGQPKRHLLTSGWSVFVTSKKLVAGDVCIFLRGGDGEL 243
           PP QELVAKDLH  EWRFRHI+RGQP+RHLL SGWSVFV+SK+LVAGD  IFLRG +GEL
Sbjct: 199 PPTQELVAKDLHANEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGEL 258

Query: 244 RVGVRRAMKLQNNASTSVISSLSMQHGILAGAFHAISTGTRFTVYYHPWTRPAEFLVPFS 303
           RVGVRRAM+ Q N  +SVISS SM  G+LA A+HAISTGT FTVYY P T P+EF+VPF 
Sbjct: 259 RVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAISTGTMFTVYYKPRTSPSEFIVPFD 318

Query: 304 QYMKSAEIDYSIGTRFRMVFEGEECADQRIAGTVVGTEDVDHIRWPASEWRCLKVKWDAT 363
           QYM+S + +YSIG RF+M FEGEE  +QR  GT+VG E+ D  RWP S+WR LKV+WD T
Sbjct: 319 QYMESVKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEESDPTRWPKSKWRSLKVRWDET 378

Query: 364 TDSITRPARVSPWNIEP 380
           + SI RP RVSPW +EP
Sbjct: 379 S-SIPRPDRVSPWKVEP 394



 Score =  119 bits (297), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 52/94 (55%), Positives = 71/94 (75%)

Query: 616 SRSCTKVIKFGTALGRSVDLTRFHGYDELISELDQMFDFNGSLIDGNSGFHIAYMDDEGD 675
           SRSCTKV K G ALGRSVDL++F  Y+EL++ELD++F+FNG L+     + I Y D+E D
Sbjct: 732 SRSCTKVHKQGIALGRSVDLSKFQNYEELVAELDRLFEFNGELMAPKKDWLIVYTDEEND 791

Query: 676 MMLVGDNPWQDFQCAVRRMFICPKEDIDGVIPSS 709
           MMLVGD+PWQ+F C VR++FI  KE++  + P +
Sbjct: 792 MMLVGDDPWQEFCCMVRKIFIYTKEEVRKMNPGT 825


>sp|Q9XED8|ARFI_ARATH Auxin response factor 9 OS=Arabidopsis thaliana GN=ARF9 PE=1 SV=1
          Length = 638

 Score =  461 bits (1186), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 283/681 (41%), Positives = 388/681 (56%), Gaps = 78/681 (11%)

Query: 35  AEAGGKNELYNELWRACAGPLVYVPRVGDIVYYFLQGHMEQVEAYNSQDDKAEL-PIYNL 93
           A  GG+  LY+ELW+ CAGPLV VP+  + VYYF QGHMEQ+EA   Q D   + P++ L
Sbjct: 2   ANRGGEY-LYDELWKLCAGPLVDVPQAQERVYYFPQGHMEQLEASTQQVDLNTMKPLFVL 60

Query: 94  PPKILCEVVYAQLKAEPGTDEVFAQITLLPR-PEIDELSLEVGNSPPLPPKLNVCSFSKK 152
           PPKILC V+   L+AE  TDEV+AQITL+P   E+DE  +    SPP   +  V SFSK 
Sbjct: 61  PPKILCNVMNVSLQAEKDTDEVYAQITLIPVGTEVDE-PMSPDPSPPELQRPKVHSFSKV 119

Query: 153 LTPSDTSTHGGFSVPKRHADECLPPLDMSKDPPLQELVAKDLHGLEWRFRHIYRGQPKRH 212
           LT SDTSTHGGFSV ++HA ECLPPLDM++  P QELVA+D+HG +W+F+HI+RGQP+RH
Sbjct: 120 LTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAEDVHGYQWKFKHIFRGQPRRH 179

Query: 213 LLTSGWSVFVTSKKLVAGDVCIFLRGGDGELRVGVRRAMKLQNNASTSVISSLSMQHGIL 272
           LLT+GWS FVTSK+LVAGD  +FLRG +GELRVGVRRA   Q++  +SVISS SM  G+L
Sbjct: 180 LLTTGWSTFVTSKRLVAGDTFVFLRGENGELRVGVRRANLQQSSMPSSVISSHSMHLGVL 239

Query: 273 AGAFHAISTGTRFTVYYHPWTRPAEFLVPFSQYMKSAEIDYSIGTRFRMVFEGEECADQR 332
           A A HA  T T F VYY P  R ++F++  ++Y+++    +S+G RF+M FEGE+  ++R
Sbjct: 240 ATARHATQTKTMFIVYYKP--RTSQFIISLNKYLEAMSNKFSVGMRFKMRFEGEDSPERR 297

Query: 333 IAGTVVGTEDVDHIRWPASEWRCLKVKWDATTDSITRPARVSPWNIEPIERTHKRPASVQ 392
            +GTV+G +D     W  S+WRCL+V WD    SI+RP +VSPW IEP   +   P SV 
Sbjct: 298 YSGTVIGVKDCSP-HWKDSKWRCLEVHWDEPA-SISRPNKVSPWEIEPFVNSENVPKSVM 355

Query: 393 HQQKRLRPNDASSPWFSSLFSNGVFQGQENRVTGVKAL--GAAKTPLLPSLVRPPNPVWA 450
            + KR R                       +V+ V AL  G   + L  S++  P     
Sbjct: 356 LKNKRPR-----------------------QVSEVSALDVGITASNLWSSVLTQP----- 387

Query: 451 QMQSGLENKLKFPMHDPFYMCLNRMVSLPGGSLMSPGLSNHWPASPFAPYEVCETAAQSK 510
                         H+    C                +++ W +      +  E A +S 
Sbjct: 388 --------------HEFAQSC----------------ITSQWSSPQQCHRDANEDAKKSD 417

Query: 511 NLSVPNASSENSGSQMCMALELKDENRTPLAQ--PNGGSRYMLFGVNLVNSPPELPSPQM 568
            L     ++  S S +     L D+  +P+ Q  P   + Y LFG++L++S   +P  + 
Sbjct: 418 WL-----NNSYSVSNVAKDSTLNDQMVSPVEQKKPETTANYRLFGIDLMSSSLAVPEEKT 472

Query: 569 ATSNELESPCSVPPTSQSSISETIQVSEPSKS--VSGILSEKQCKNCYVSRSCTKVIKFG 626
           A    +        +     SE  +VSE  K     G   E Q K    +RS TKV   G
Sbjct: 473 APMRPINISKPTMDSHSDPKSEISKVSEEKKQEPAEGSPKEVQSKQSSSTRSRTKVQMQG 532

Query: 627 TALGRSVDLTRFHGYDELISELDQMFDFNGSLIDGNSGFHIAYMDDEGDMMLVGDNPWQD 686
             +GR+VDL    GY+ELI +++++FD  G L   N  + I + DDEGDMMLVGD+PW +
Sbjct: 533 VPVGRAVDLNALKGYNELIDDIEKLFDIKGELRSRNQ-WEIVFTDDEGDMMLVGDDPWPE 591

Query: 687 FQCAVRRMFICPKEDIDGVIP 707
           F   V+R+FI  KE++  + P
Sbjct: 592 FCNMVKRIFIWSKEEVKKMTP 612


>sp|Q2R3F5|ARFW_ORYSJ Auxin response factor 23 OS=Oryza sativa subsp. japonica GN=ARF23
           PE=1 SV=2
          Length = 853

 Score =  456 bits (1174), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 234/401 (58%), Positives = 279/401 (69%), Gaps = 22/401 (5%)

Query: 43  LYNELWRACAGPLVYVPRVGDIVYYFLQGHMEQVEAYNSQDDKAELPIYNLPPKILCEVV 102
           L+ ELW ACAGPLV VPRVG+ V+YF QGH+EQVEA  +Q  +  + +YNLP KILCEV+
Sbjct: 38  LFTELWSACAGPLVTVPRVGEKVFYFPQGHIEQVEASTNQVGEQRMQLYNLPWKILCEVM 97

Query: 103 YAQLKAEPGTDEVFAQITLLPRPEIDELSLEVGNSPPLPP-----KLNVCSFSKKLTPSD 157
             +LKAEP TDEV+AQ+TLLP  +  E +       P  P     +  V SF K LT SD
Sbjct: 98  NVELKAEPDTDEVYAQLTLLPESKQQEDNGSTEEEVPSAPAAGHVRPRVHSFCKTLTASD 157

Query: 158 TSTHGGFSVPKRHADECLPPLDMSKDPPLQELVAKDLHGLEWRFRHIYRGQPKRHLLTSG 217
           TSTHGGFSV +RHADECLPPLDMS+ PP QELVAKDLHG+EWRFRHI+RGQP+RHLL SG
Sbjct: 158 TSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGVEWRFRHIFRGQPRRHLLQSG 217

Query: 218 WSVFVTSKKLVAGDVCIFLRGGDGELRVGVRRAMKLQNNASTSVISSLSMQHGILAGAFH 277
           WSVFV++K+LVAGD  IFLRG +GELRVGVRRAM+ Q N  +SVISS SM  G+LA A+H
Sbjct: 218 WSVFVSAKRLVAGDAFIFLRGENGELRVGVRRAMRQQTNVPSSVISSHSMHLGVLATAWH 277

Query: 278 AISTGTRFTVYYHPWTRPAEFLVPFSQYMKSAEIDYSIGTRFRMVFEGEECADQRIAGTV 337
           A++TGT FTVYY P T PAEF+VP+ +YM+S + +YSIG RF+M FEGEE  +QR  GT+
Sbjct: 278 AVNTGTMFTVYYKPRTSPAEFVVPYDRYMESLKQNYSIGMRFKMRFEGEEAPEQRFTGTI 337

Query: 338 VGTEDVDHIRWPASEWRCLKVKWDATTDSITRPARVSPWNIEPIERTHKRPASVQHQQKR 397
           VG  D D   WP S+WR LKV+WD  + SI RP RVSPW IEP             + KR
Sbjct: 338 VGMGDSDPAGWPESKWRSLKVRWDEAS-SIPRPERVSPWQIEPAVSPPPVNPLPVPRTKR 396

Query: 398 LRPNDASSPWFSSLFS-------------NG---VFQGQEN 422
           LRPN  + P  SS  +             NG    FQ QEN
Sbjct: 397 LRPNATALPADSSAIAKEAATKVVVESEPNGTQRTFQTQEN 437



 Score =  117 bits (294), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 80/199 (40%), Positives = 112/199 (56%), Gaps = 38/199 (19%)

Query: 542 QPNGGSRYMLFGVNLVNSPPELPSPQMATSNELESPCSV-----PPTSQSS------ISE 590
           Q   G+   LFG++L +SP        A S  L+SP SV     P T  ++      ++E
Sbjct: 630 QKAKGASCKLFGIHL-DSP--------AKSEPLKSPSSVVYDGTPQTPGATEWRRPDVTE 680

Query: 591 TIQVSEPSKSVSGI-------LSEK----------QCKNCYVS-RSCTKVIKFGTALGRS 632
             + S+PSK++  +       + EK           CK+  VS RSC KV K G ALGRS
Sbjct: 681 VEKCSDPSKAMKPLDTPQPDSVPEKPSSQQASRNMSCKSQGVSTRSCKKVHKQGIALGRS 740

Query: 633 VDLTRFHGYDELISELDQMFDFNGSLIDGNSGFHIAYMDDEGDMMLVGDNPWQDFQCAVR 692
           VDLT+F+GY+ELI+ELD MFDFNG L      + + Y D+EGDMMLVGD+PW +F   V 
Sbjct: 741 VDLTKFNGYEELIAELDDMFDFNGELKGPKKEWMVVYTDNEGDMMLVGDDPWIEFCDMVH 800

Query: 693 RMFICPKEDIDGVIPSSPN 711
           ++FI  +E++  + P + N
Sbjct: 801 KIFIYTREEVQRMNPGTLN 819


>sp|A2ZET6|ARFW_ORYSI Auxin response factor 23 OS=Oryza sativa subsp. indica GN=ARF23
           PE=2 SV=1
          Length = 853

 Score =  456 bits (1172), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 234/401 (58%), Positives = 279/401 (69%), Gaps = 22/401 (5%)

Query: 43  LYNELWRACAGPLVYVPRVGDIVYYFLQGHMEQVEAYNSQDDKAELPIYNLPPKILCEVV 102
           L+ ELW ACAGPLV VPRVG+ V+YF QGH+EQVEA  +Q  +  + +YNLP KILCEV+
Sbjct: 38  LFTELWSACAGPLVTVPRVGEKVFYFPQGHIEQVEASTNQVGEQRMQLYNLPWKILCEVM 97

Query: 103 YAQLKAEPGTDEVFAQITLLPRPEIDELSLEVGNSPPLPP-----KLNVCSFSKKLTPSD 157
             +LKAEP TDEV+AQ+TLLP  +  E +       P  P     +  V SF K LT SD
Sbjct: 98  NVELKAEPDTDEVYAQLTLLPELKQQEDNGSTEEEVPSAPAAGHVRPRVHSFCKTLTASD 157

Query: 158 TSTHGGFSVPKRHADECLPPLDMSKDPPLQELVAKDLHGLEWRFRHIYRGQPKRHLLTSG 217
           TSTHGGFSV +RHADECLPPLDMS+ PP QELVAKDLHG+EWRFRHI+RGQP+RHLL SG
Sbjct: 158 TSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGVEWRFRHIFRGQPRRHLLQSG 217

Query: 218 WSVFVTSKKLVAGDVCIFLRGGDGELRVGVRRAMKLQNNASTSVISSLSMQHGILAGAFH 277
           WSVFV++K+LVAGD  IFLRG +GELRVGVRRAM+ Q N  +SVISS SM  G+LA A+H
Sbjct: 218 WSVFVSAKRLVAGDAFIFLRGENGELRVGVRRAMRQQTNVPSSVISSHSMHLGVLATAWH 277

Query: 278 AISTGTRFTVYYHPWTRPAEFLVPFSQYMKSAEIDYSIGTRFRMVFEGEECADQRIAGTV 337
           A++TGT FTVYY P T PAEF+VP+ +YM+S + +YSIG RF+M FEGEE  +QR  GT+
Sbjct: 278 AVNTGTMFTVYYKPRTSPAEFVVPYDRYMESLKRNYSIGMRFKMRFEGEEAPEQRFTGTI 337

Query: 338 VGTEDVDHIRWPASEWRCLKVKWDATTDSITRPARVSPWNIEPIERTHKRPASVQHQQKR 397
           VG  D D   WP S+WR LKV+WD  + SI RP RVSPW IEP             + KR
Sbjct: 338 VGMGDSDPAGWPESKWRSLKVRWDEAS-SIPRPERVSPWQIEPAVSPPPVNPLPVPRTKR 396

Query: 398 LRPNDASSPWFSSLFS-------------NG---VFQGQEN 422
           LRPN  + P  SS  +             NG    FQ QEN
Sbjct: 397 LRPNATALPADSSAIAKEAATKVVVESEPNGTQRTFQTQEN 437



 Score =  117 bits (294), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 80/199 (40%), Positives = 112/199 (56%), Gaps = 38/199 (19%)

Query: 542 QPNGGSRYMLFGVNLVNSPPELPSPQMATSNELESPCSV-----PPTSQSS------ISE 590
           Q   G+   LFG++L +SP        A S  L+SP SV     P T  ++      ++E
Sbjct: 630 QKAKGASCKLFGIHL-DSP--------AKSEPLKSPSSVVYDGTPQTPGATEWRRPDVTE 680

Query: 591 TIQVSEPSKSVSGI-------LSEK----------QCKNCYVS-RSCTKVIKFGTALGRS 632
             + S+PSK++  +       + EK           CK+  VS RSC KV K G ALGRS
Sbjct: 681 VEKCSDPSKAMKPLDTPQPDSVPEKPSSQQASRNMSCKSQGVSTRSCKKVHKQGIALGRS 740

Query: 633 VDLTRFHGYDELISELDQMFDFNGSLIDGNSGFHIAYMDDEGDMMLVGDNPWQDFQCAVR 692
           VDLT+F+GY+ELI+ELD MFDFNG L      + + Y D+EGDMMLVGD+PW +F   V 
Sbjct: 741 VDLTKFNGYEELIAELDDMFDFNGELKGPKKEWMVVYTDNEGDMMLVGDDPWIEFCDMVH 800

Query: 693 RMFICPKEDIDGVIPSSPN 711
           ++FI  +E++  + P + N
Sbjct: 801 KIFIYTREEVQRMNPGTLN 819


>sp|Q5NB85|ARFA_ORYSJ Auxin response factor 1 OS=Oryza sativa subsp. japonica GN=ARF1
           PE=2 SV=1
          Length = 699

 Score =  431 bits (1109), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 283/726 (38%), Positives = 398/726 (54%), Gaps = 89/726 (12%)

Query: 39  GKNELYNELWRACAGPLVYVPRVGDIVYYFLQGHMEQVEAYNSQDDKAE-LPIYNLPPKI 97
           G  EL+ ELWRACAGPLV VP+  + V+YFLQGH+EQ++        AE + ++ +P KI
Sbjct: 11  GDPELFAELWRACAGPLVEVPQRDERVFYFLQGHLEQLQEPTDPALLAEQIKMFQVPYKI 70

Query: 98  LCEVVYAQLKAEPGTDEVFAQITLLPRPEIDELSLEVGNSPPLPPKLNVCSFSKKLTPSD 157
           LC+VV  +LKAE  TDEVFAQITL P P+ + L        P  P+  V SF K LTPSD
Sbjct: 71  LCKVVNVELKAETETDEVFAQITLQPDPDQENLPTLPDPPLPEQPRPVVHSFCKILTPSD 130

Query: 158 TSTHGGFSVPKRHADECLPPLDMSKDPPLQELVAKDLHGLEWRFRHIYRGQPKRHLLTSG 217
           TSTHGGFSV +RHA+ECLPPLDMS   P QEL+ KDLHG EWRF+HIYRGQP+RHLLT+G
Sbjct: 131 TSTHGGFSVLRRHANECLPPLDMSMATPTQELITKDLHGSEWRFKHIYRGQPRRHLLTTG 190

Query: 218 WSVFVTSKKLVAGDVCIFLRGGDGELRVGVRRAMKLQNNASTSVISSLSMQHGILAGAFH 277
           WS FVTSKKL++GD  ++LR   GE RVGVRR ++ Q+    SVISS SM  G+LA A H
Sbjct: 191 WSTFVTSKKLISGDAFVYLRSETGEQRVGVRRLVQKQSTMPASVISSQSMHLGVLASASH 250

Query: 278 AISTGTRFTVYYHPWTRPAEFLVPFSQYMKSAEIDYSIGTRFRMVFEGEECADQRIAGTV 337
           AI T + F VYY P    ++++V  ++Y+ ++++ +++G RF+M FEGE+   ++ +GT+
Sbjct: 251 AIKTNSIFLVYYRPRLSQSQYIVSVNKYLAASKVGFNVGMRFKMSFEGEDVPVKKFSGTI 310

Query: 338 VGTEDVDHIRWPASEWRCLKVKWDATTDSITRPARVSPWNIEPIERTHKRPA---SVQHQ 394
           VG  D+  ++W  SEW+ LKV+WD  T+ +  P RVSPW IE  + T   PA    +Q  
Sbjct: 311 VGEGDLS-LQWSGSEWKSLKVQWDEVTN-VNGPERVSPWEIETCDGT--APAINVPLQSA 366

Query: 395 QKRLRPNDASSP------------WFSSLFSNGVFQGQENRVTGVKALGAAKTPLLPSLV 442
            K  RP + S              W S +        Q++  TG+   G+++    P+ +
Sbjct: 367 TKNKRPREPSETIDLQSLEPAQEFWLSGM-------PQQHEKTGI---GSSE----PNCI 412

Query: 443 RPPNPVW--------AQMQSGLENKLKFPMHDPFYMCLNRMVSLPGGSLMSPGL----SN 490
                VW        A   S  +N L        +   N+ VS P  S +S  +    SN
Sbjct: 413 SGHQVVWPGEHPGYGAVSSSVCQNPLVLESWLKDFNSSNKGVS-PTLSEISQKIFQVTSN 471

Query: 491 H-----WPASPFAPYEVCE-TAAQSKNLSVPNASSENSGSQMCMALELKDENRTPLAQPN 544
                 WPA   + Y+  E T+  S N +     +E         +E K E         
Sbjct: 472 EARIATWPAR--SAYQAEEPTSKLSSNTAACGYRTEEVAPNASKVVEGKKEP-------- 521

Query: 545 GGSRYMLFGVNLVNSPPELPSPQMATSNELESPCSVPPTS---QSSISETIQVSEPSKSV 601
             + + LFGV+L      +    ++T+ + +S       S     S  ++ Q+S  SK  
Sbjct: 522 --AMFRLFGVDL------MKCTSISTTTDDKSSVGAGEASAKGTGSHEDSGQLSAFSKVT 573

Query: 602 SGILS------EKQCKNCYVSRSCTKVIKFGTALGRSVDLTRFHGYDELISELDQMFDFN 655
              ++      E Q    Y +R+  KV   G A+GR+VDL    GY++L++EL++MF+  
Sbjct: 574 KEHIAADESPQEIQSHQNYTARTRIKVQMHGNAVGRAVDLANLDGYEQLMNELEEMFNIK 633

Query: 656 GSLIDGNSGFHIAYMDDEGDMMLVGDNPWQDFQCAVRRMFICPKEDIDGVIP-----SSP 710
               D    + +A+ DDEGD M VGD+PW +F   VR++ + P ED   + P     SS 
Sbjct: 634 ----DLKQKWKVAFTDDEGDTMEVGDDPWLEFCQMVRKIVLYPIEDEKKIEPHPKLLSSA 689

Query: 711 NPTPPQ 716
           NP   Q
Sbjct: 690 NPEQDQ 695


>sp|Q2QQX6|ARFX_ORYSJ Auxin response factor 24 OS=Oryza sativa subsp. japonica GN=ARF24
           PE=2 SV=1
          Length = 841

 Score =  426 bits (1095), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 223/383 (58%), Positives = 268/383 (69%), Gaps = 15/383 (3%)

Query: 43  LYNELWRACAGPLVYVPRVGDIVYYFLQGHMEQVEAYNSQ-DDKAELPIYNLPPKILCEV 101
           L+ ELWRACAGPLV VP VG+ V+Y  QGH+EQVEA  +Q  ++   P+YNLP KI C+V
Sbjct: 29  LFVELWRACAGPLVTVPAVGERVFYLPQGHIEQVEASTNQVAEQQGAPLYNLPWKIPCKV 88

Query: 102 VYAQLKAEPGTDEVFAQITLLPRPEIDELSLEVGNS------------PPLPPKLNVCSF 149
           +  +LKAEP TDEV+AQ+TLLP  + D      GN             P    +  V SF
Sbjct: 89  MNVELKAEPDTDEVYAQLTLLPEKQQDGNGSGNGNVSKDKVEEEEVVPPAATERPRVHSF 148

Query: 150 SKKLTPSDTSTHGGFSVPKRHADECLPPLDMSKDPPLQELVAKDLHGLEWRFRHIYRGQP 209
            K LT SDTSTHGGFSV +RHADECLPPLDMS+ PP QELVAKDLHG+EWRFRHI+RGQP
Sbjct: 149 CKTLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPTQELVAKDLHGVEWRFRHIFRGQP 208

Query: 210 KRHLLTSGWSVFVTSKKLVAGDVCIFLRGGDGELRVGVRRAMKLQNNASTSVISSLSMQH 269
           +RHLL SGWSVFV++K+LVAGD  IFLRG +GELRVGVRRAM+ Q N  +SVISS SM  
Sbjct: 209 RRHLLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRAMRQQANIPSSVISSHSMHL 268

Query: 270 GILAGAFHAISTGTRFTVYYHPWTRPAEFLVPFSQYMKSAEIDYSIGTRFRMVFEGEECA 329
           G+LA A+HA++TGT FTVYY P T P+EF+VP   Y +S + ++SIG RF+M FEGEE A
Sbjct: 269 GVLATAWHAVNTGTMFTVYYKPRTSPSEFVVPRDLYKESLKRNHSIGMRFKMTFEGEEAA 328

Query: 330 DQRIAGTVVGTEDVDHIRWPASEWRCLKVKWDATTDSITRPARVSPWNIEPIERTHKRPA 389
           +QR  GT+VG  D D   W  S+WR LKV+WD    S+ RP RVSPW IEP         
Sbjct: 329 EQRFTGTIVGVGDSDPSGWADSKWRSLKVRWDEAA-SVPRPDRVSPWQIEPANSPSPVNP 387

Query: 390 SVQHQQKRLRPND-ASSPWFSSL 411
               + KR RPN  ASSP  S++
Sbjct: 388 LPAPRTKRARPNVLASSPDLSAV 410



 Score =  121 bits (303), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 77/183 (42%), Positives = 103/183 (56%), Gaps = 14/183 (7%)

Query: 542 QPNGGSRYMLFGVNLVNSP--PEL--PSPQMATSNEL------ESPCSVPPTSQSSISET 591
           Q   GS  MLFG++L +SP  PEL    P +A   +L      E  CS P  +   +   
Sbjct: 626 QKAKGSSCMLFGISL-DSPAKPELLISPPSVAFDGKLQQDALEEDECSDPSKTVKPLDGA 684

Query: 592 IQVSEPSKSVS---GILSEKQCKNCYVSRSCTKVIKFGTALGRSVDLTRFHGYDELISEL 648
              S   K  S   G  + +  +    SRSC KV K G ALGRS+DLT+F  YDELI+EL
Sbjct: 685 QHDSAREKHQSCPDGTKNIQSKQQNGSSRSCKKVHKQGIALGRSIDLTKFTCYDELIAEL 744

Query: 649 DQMFDFNGSLIDGNSGFHIAYMDDEGDMMLVGDNPWQDFQCAVRRMFICPKEDIDGVIPS 708
           DQMFDFNG L   +  + + Y D+EGDMMLVGD+PW +F   V ++FI  +E++  + P 
Sbjct: 745 DQMFDFNGELNSSSKNWMVVYTDNEGDMMLVGDDPWNEFCNMVHKIFIYTREEVQKMNPG 804

Query: 709 SPN 711
           + N
Sbjct: 805 ALN 807


>sp|Q9LQE8|ARFN_ARATH Putative auxin response factor 14 OS=Arabidopsis thaliana GN=ARF14
           PE=3 SV=2
          Length = 605

 Score =  412 bits (1058), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 248/669 (37%), Positives = 360/669 (53%), Gaps = 91/669 (13%)

Query: 38  GGKNELYNELWRACAGPLVYVPRVGDIVYYFLQGHMEQVEAYNSQDDKAELPIYNLPPKI 97
           G K+ +Y +LW+ CAGPL  +P++G+ VYYF QGH+E VEA   ++     PI + P K+
Sbjct: 19  GSKSYMYEQLWKLCAGPLCDIPKLGEKVYYFPQGHIELVEASTREELNELQPICDFPSKL 78

Query: 98  LCEVVYAQLKAEPGTDEVFAQITLLPRPEIDELSLEVGNSPPLPPKLNVCSFSKKLTPSD 157
            C V+  QLK E  +DE +A+ITL+P  +  ++ +   N     P +N  SF+K LT SD
Sbjct: 79  QCRVIAIQLKVENNSDETYAEITLMP--DTTQVVIPTQNQNQFRPLVN--SFTKVLTASD 134

Query: 158 TSTHGGFSVPKRHADECLPPLDMSKDPPLQELVAKDLHGLEWRFRHIYRGQPKRHLLTSG 217
           TS HGGFSVPK+HA ECLPPLDMS+  P QE++A DLHG +WRFRHIYRG  +RHLLT G
Sbjct: 135 TSVHGGFSVPKKHAIECLPPLDMSQPLPTQEILAIDLHGNQWRFRHIYRGTAQRHLLTIG 194

Query: 218 WSVFVTSKKLVAGDVCIFLRGGDGELRVGVRRAMKLQNNASTSVISSLSMQHGILAGAFH 277
           W+ F TSKKLV GDV +F+RG  GELRVG+RRA   Q N  +S++S  SM+HGI+A A H
Sbjct: 195 WNAFTTSKKLVEGDVIVFVRGETGELRVGIRRAGHQQGNIPSSIVSIESMRHGIIASAKH 254

Query: 278 AISTGTRFTVYYHPWTRPAEFLVPFSQYMKSAEIDYSIGTRFRMVFEGEECADQRIAGTV 337
           A      F V Y P  R ++F+V + +++      +++G+RF M FEG++ +++R  GT+
Sbjct: 255 AFDNQCMFIVVYKP--RSSQFIVSYDKFLDVVNNKFNVGSRFTMRFEGDDFSERRSFGTI 312

Query: 338 VGTEDVDHIRWPASEWRCLKVKWDATTDSITRPARVSPWNIEPIERTHKRPASVQHQQKR 397
           +G  D     W  SEWR L+V+WD    S  RP +VSPW+IE +                
Sbjct: 313 IGVSDFSP-HWKCSEWRSLEVQWDEFA-SFPRPNQVSPWDIEHL---------------- 354

Query: 398 LRPNDASSPWFSSLFSNGVFQGQENRVTGVKALGAAKTPLLPSLVRPPNPVWAQMQSGLE 457
                  +PW S++  +   + + +R   V  +G++ + LLP       P   Q Q   +
Sbjct: 355 -------TPW-SNVSRSSFLKNKRSR--EVNEIGSSSSHLLP-------PTLTQGQEIGQ 397

Query: 458 NKLKFPMHDPF-YMCLNRMVSLPGGSLMSPGLSNHWPASPFAPYEVCETAAQSKNLSVPN 516
             +  PM+    Y  +      P   LMS      +P  P A            N+  P 
Sbjct: 398 QSMATPMNISLRYRDITEDAMTPSRLLMS------YPVQPMAKLNY-------NNVVTP- 443

Query: 517 ASSENSGSQMCMALELKDENRTPLAQPNGGSRYMLFGVNLVNSPPELPSPQMATSNELES 576
                            +EN T     N  + + LFGV+L  +P  +  P      E+  
Sbjct: 444 ----------------IEENIT----TNAVASFRLFGVSLA-TPSVIKDPVEQIGLEISR 482

Query: 577 PCSVPPTSQSSISETIQVSEPSKSVSGILSEKQCKNCYVSRSCTKVIKFGTALGRSVDLT 636
                   QS I     +  P        +E Q K    +R+CTKV   G  +GR+VDL+
Sbjct: 483 LTQEKKFGQSQI-----LRSP--------TEIQSKQFSSTRTCTKVQMQGVTIGRAVDLS 529

Query: 637 RFHGYDELISELDQMFDFNGSLIDGNSGFHIAYMDDEGDMMLVGDNPWQDFQCAVRRMFI 696
             +GYD+LI EL+++FD  G L    + + IA+ ++E D MLVG++PW +F   V+++FI
Sbjct: 530 VLNGYDQLILELEKLFDLKGQL-QARNQWEIAFTNNEEDKMLVGEDPWPEFCNMVKKIFI 588

Query: 697 CPKEDIDGV 705
             KE++  +
Sbjct: 589 YSKEEVKNL 597


>sp|Q9XID4|ARFL_ARATH Auxin response factor 12 OS=Arabidopsis thaliana GN=ARF12 PE=2 SV=2
          Length = 593

 Score =  407 bits (1046), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 245/660 (37%), Positives = 353/660 (53%), Gaps = 90/660 (13%)

Query: 38  GGKNELYNELWRACAGPLVYVPRVGDIVYYFLQGHMEQVEAYNSQDDKAELPIYNLPPKI 97
           G K+ +Y +LW+ CAGPL  +P++G+ VYYF QGH+E VE    ++     PI +LP K+
Sbjct: 19  GSKSYVYEQLWKLCAGPLCDIPKLGEKVYYFPQGHIELVETSTREELNELQPICDLPSKL 78

Query: 98  LCEVVYAQLKAEPGTDEVFAQITLLPRPEIDELSLEVGNSPPLPPKLNVCSFSKKLTPSD 157
            C V+   LK E  +DE +A+ITL+P  +  ++ +   N     P +N  SF+K LT SD
Sbjct: 79  QCRVIAIHLKVENNSDETYAEITLMP--DTTQVVIPTQNENQFRPLVN--SFTKVLTASD 134

Query: 158 TSTHGGFSVPKRHADECLPPLDMSKDPPLQELVAKDLHGLEWRFRHIYRGQPKRHLLTSG 217
           TS HGGF VPK+HA ECLP LDMS+  P QEL+A DLHG +WRF H YRG P+RHLLT+G
Sbjct: 135 TSAHGGFFVPKKHAIECLPSLDMSQPLPAQELLAIDLHGNQWRFNHNYRGTPQRHLLTTG 194

Query: 218 WSVFVTSKKLVAGDVCIFLRGGDGELRVGVRRAMKLQNNASTSVISSLSMQHGILAGAFH 277
           W+ F TSKKLVAGDV +F+RG  GELRVG+RRA   Q N  +S++S   M+HG++A A H
Sbjct: 195 WNAFTTSKKLVAGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVVASAKH 254

Query: 278 AISTGTRFTVYYHPWTRPAEFLVPFSQYMKSAEIDYSIGTRFRMVFEGEECADQRIAGTV 337
           A      FTV Y P  R ++F+V + +++ +    +++G+RF M  EG++ +++R  GT+
Sbjct: 255 AFDNQCMFTVVYKP--RSSKFIVSYDKFLDAVNNKFNVGSRFTMRLEGDDFSERRCFGTI 312

Query: 338 VGTEDVDHIRWPASEWRCLKVKWDATTDSITRPARVSPWNIEPIERTHKRPASVQHQQKR 397
           +G  D     W  SEWR L+V+WD  T S   P +VSPW+IE +      P S   + KR
Sbjct: 313 IGVSDFSP-HWKCSEWRSLEVQWDEFT-SFPGPKKVSPWDIEHLMPAINVPRSFLLKNKR 370

Query: 398 LRPNDASSPWFSSLFSNGVFQGQENRVTGVKALGAAKTPLLPSLVRPPNPVWAQMQSGLE 457
           LR                           V  +G++ + LLP       P+  Q Q   +
Sbjct: 371 LRE--------------------------VNEIGSSSSHLLP-------PILTQGQENEQ 397

Query: 458 NKLKFPMHDPF-YMCLNRMVSLPGGSLMSPGLSNHWPASPFAPYEVCETAAQSKNLSVPN 516
             +  PM+    Y         P   LMS      +P  P                    
Sbjct: 398 LSVASPMNISLRYRDATEDAMNPSKLLMS------YPVQPMPKL---------------- 435

Query: 517 ASSENSGSQMCMALELKDENRTPLAQPNGGSRYMLFGVNLVNSPPELPSPQMATSNELES 576
               N  +QM   +E     +T       G+ + LFGV L ++PP +  P     +E+  
Sbjct: 436 ----NYNNQMVTEMEENITTKT-------GTNFRLFGVTL-DTPPVIKDPIEEIGSEIS- 482

Query: 577 PCSVPPTSQSSISETIQVSEPSKSVSGILSEKQCKNCYVSRSCTKVIKFGTALGRSVDLT 636
              +    +  +S+T++            +E Q K    SR+CTKV   G  +GR+VDL+
Sbjct: 483 --KLTEGKKFGLSQTLRSP----------TEIQNKQFSSSRTCTKVQMQGVTIGRAVDLS 530

Query: 637 RFHGYDELISELDQMFDFNGSLIDGNSGFHIAYMDDEGDMMLVGDNPWQDFQCAVRRMFI 696
             +GYD+LI EL+++FD  G L   N  + IA+ D + D MLVGD+PW +F   V+++FI
Sbjct: 531 VLNGYDQLILELEKLFDIKGQLQTRNQ-WEIAFTDSDEDKMLVGDDPWPEFCNMVKKIFI 589


>sp|Q9C8N9|ARFU_ARATH Putative auxin response factor 21 OS=Arabidopsis thaliana GN=ARF21
           PE=3 SV=2
          Length = 606

 Score =  404 bits (1039), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 246/666 (36%), Positives = 359/666 (53%), Gaps = 90/666 (13%)

Query: 38  GGKNELYNELWRACAGPLVYVPRVGDIVYYFLQGHMEQVEAYNSQDDKAELPIYNLPPKI 97
           G K+ +Y +LW+ CAGPL  +P++G+ VYYF QG++E V+A   ++     PI +LP K+
Sbjct: 19  GSKSYMYEQLWKLCAGPLCDIPKLGENVYYFPQGNIELVQASTREELNELQPICDLPSKL 78

Query: 98  LCEVVYAQLKAEPGTDEVFAQITLLPRPEIDELSLEVGNSPPLPPKLNVCSFSKKLTPSD 157
            C V+   LK E  +DE++A+ITL+P  +  ++ +   +     P +N  SF+K LT SD
Sbjct: 79  QCRVIAIHLKVENNSDEIYAEITLMP--DTTQVVIPTQSENRFRPLVN--SFTKVLTASD 134

Query: 158 TSTHGGFSVPKRHADECLPPLDMSKDPPLQELVAKDLHGLEWRFRHIYRGQPKRHLLTSG 217
           TS +GGFSVPK+HA ECLPPLDMS+  P QE++A DLH  +WRFRH YRG P+RH LT+G
Sbjct: 135 TSAYGGFSVPKKHAIECLPPLDMSQPLPAQEILAIDLHDNQWRFRHNYRGTPQRHSLTTG 194

Query: 218 WSVFVTSKKLVAGDVCIFLRGGDGELRVGVRRAMKLQNNASTSVISSLSMQHGILAGAFH 277
           W+ F+TSKKLV GDV +F+RG  GELRVG+RRA   Q N  +S++S   M+HG++A A H
Sbjct: 195 WNEFITSKKLVKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVIASAKH 254

Query: 278 AISTGTRFTVYYHPWTRPAEFLVPFSQYMKSAEIDYSIGTRFRMVFEGEECADQRIAGTV 337
           A      F V Y P  R ++F+V + +++ +    +++G+RF M FEG++ +++R  GT+
Sbjct: 255 AFDNQCIFIVVYKP--RSSQFIVSYDKFLDAVNNKFNVGSRFTMRFEGDDFSERRYFGTI 312

Query: 338 VGTEDVDHIRWPASEWRCLKVKWDATTDSITRPARVSPWNIEPIERTHKRPASVQHQQKR 397
           +G  D     W  SEWR L+V+WD    S +RP +VSPW IE +      P S   + KR
Sbjct: 313 IGVSDFSP-HWKCSEWRSLEVQWDEFA-SFSRPNKVSPWEIEHLVPALNVPRSSLLKNKR 370

Query: 398 LRPNDASSPWFSSLFSNGVFQGQENRVTGVKALGAAKTPLLPSLVRPPNPVWAQMQSGLE 457
           LR                           V   G++ + LLP       P+  Q Q   +
Sbjct: 371 LRE--------------------------VNEFGSSSSHLLP-------PILTQGQEIGQ 397

Query: 458 NKLKFPMHDPF-YMCLNRMVSLPGGSLMSPGLSNHWPASPFAPYEVCETAAQSKNLSVPN 516
             +  PM+    Y         P   LMS      +P  P                    
Sbjct: 398 LSVASPMNISLRYRDTTEAAMNPSRLLMS------YPVQPMPKL---------------- 435

Query: 517 ASSENSGSQMCMALELKDENRTPLAQPNGGSRYMLFGVNLVNSPPELPSPQMATSNELES 576
               N  +QM   +E   EN T  A    G+ + LFGV L ++PP +  P     +++  
Sbjct: 436 ----NYNNQMVTQIE---ENITTKA----GTNFRLFGVTL-DTPPMIKDPIKQIGSDI-- 481

Query: 577 PCSVPPTSQSSISETIQVSEPSKSVSGILSEKQCKNCYVSRSCTKVIKFGTALGRSVDLT 636
                    S ++E  +  +     S I  E Q K    SR+CTKV   G  +GR+VDL+
Sbjct: 482 ---------SKLTERKKFGQSQTLRSPI--EIQSKQFSSSRTCTKVQMQGVTIGRAVDLS 530

Query: 637 RFHGYDELISELDQMFDFNGSLIDGNSGFHIAYMDDEGDMMLVGDNPWQDFQCAVRRMFI 696
             +GYD+LI EL+++FD  G L   N  + IA+ D +G  MLVGD+PW +F   V+++ I
Sbjct: 531 VLNGYDQLILELEKLFDIKGQLQTRNQ-WKIAFTDSDGYEMLVGDDPWPEFCKMVKKILI 589

Query: 697 CPKEDI 702
             KE++
Sbjct: 590 YSKEEV 595


>sp|Q0JCZ4|ARFI_ORYSJ Auxin response factor 9 OS=Oryza sativa subsp. japonica GN=ARF9
           PE=2 SV=1
          Length = 673

 Score =  404 bits (1037), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 202/366 (55%), Positives = 261/366 (71%), Gaps = 11/366 (3%)

Query: 41  NELYNELWRACAGPLVYVPRVGDIVYYFLQGHMEQVEAYNSQDDKAELPIYNLPPKILCE 100
           + L+ ELW ACAGPLV VP+ G+ VYYF QGHMEQ+EA  +Q     LP++NLP KILC 
Sbjct: 19  DALFRELWHACAGPLVTVPKRGERVYYFPQGHMEQLEASTNQQLDQYLPMFNLPSKILCS 78

Query: 101 VVYAQLKAEPGTDEVFAQITLLPRPEIDELSLEVGNSPPLPPKLNVC---SFSKKLTPSD 157
           VV  +L+AE  +DEV+AQI L P  +  EL+    +  P    L  C   SF K LT SD
Sbjct: 79  VVNVELRAEADSDEVYAQIMLQPEADQSELT----SLDPELQDLEKCTAHSFCKTLTASD 134

Query: 158 TSTHGGFSVPKRHADECLPPLDMSKDPPLQELVAKDLHGLEWRFRHIYRGQPKRHLLTSG 217
           TSTHGGFSV +RHA+ECLP LDMS++PP QELVAKDLHG EW FRHI+RGQP+RHLLT+G
Sbjct: 135 TSTHGGFSVLRRHAEECLPQLDMSQNPPCQELVAKDLHGTEWHFRHIFRGQPRRHLLTTG 194

Query: 218 WSVFVTSKKLVAGDVCIFLRGGDGELRVGVRRAMKLQNNASTSVISSLSMQHGILAGAFH 277
           WSVFV+SK+LVAGD  IFLRG  GELRVGVRR M+  NN  +SVISS SM  G+LA A H
Sbjct: 195 WSVFVSSKRLVAGDAFIFLRGESGELRVGVRRLMRQVNNMPSSVISSHSMHLGVLATASH 254

Query: 278 AISTGTRFTVYYHPWTRPAEFLVPFSQYMKSAEIDYSIGTRFRMVFEGEECADQRIAGTV 337
           AISTGT F+V+Y P T  +EF+V  ++Y+++ + + S+G RF+M FEG+E  ++R +GT+
Sbjct: 255 AISTGTLFSVFYKPRTSRSEFVVSVNKYLEAKKQNLSVGMRFKMRFEGDEAPERRFSGTI 314

Query: 338 VGTEDVDHIR---WPASEWRCLKVKWDATTDSITRPARVSPWNIEPIERTHKRPASVQHQ 394
           +G   V  +    W  S+W+ LKV+WD  + +I RP RVSPW +EP++ ++ +P     +
Sbjct: 315 IGIGSVPAMSKSPWADSDWKSLKVQWDEPS-AIVRPDRVSPWELEPLDASNPQPPQPPLR 373

Query: 395 QKRLRP 400
            KR RP
Sbjct: 374 NKRARP 379



 Score = 99.0 bits (245), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 46/97 (47%), Positives = 63/97 (64%)

Query: 617 RSCTKVIKFGTALGRSVDLTRFHGYDELISELDQMFDFNGSLIDGNSGFHIAYMDDEGDM 676
           RSCTKVI  G A+GR+VDLT+ +GY +L S+L++MFD  G L      + + Y DDE DM
Sbjct: 547 RSCTKVIMQGMAVGRAVDLTKLNGYGDLRSKLEEMFDIQGDLCPTLKRWQVVYTDDEDDM 606

Query: 677 MLVGDNPWQDFQCAVRRMFICPKEDIDGVIPSSPNPT 713
           MLVGD+PW +F   V+R++I   E+   + P S  P 
Sbjct: 607 MLVGDDPWDEFCSMVKRIYIYSYEEAKLLAPKSKLPV 643


>sp|Q9ZPY6|ARFK_ARATH Auxin response factor 11 OS=Arabidopsis thaliana GN=ARF11 PE=2 SV=3
          Length = 622

 Score =  394 bits (1012), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 203/366 (55%), Positives = 259/366 (70%), Gaps = 14/366 (3%)

Query: 41  NELYNELWRACAGPLVYVPRVGDIVYYFLQGHMEQVEAYNSQDD-KAELPIYNLPPKILC 99
           +ELY ELW+ACAGPLV VPR G+ V+YF QGHMEQ+ A  +Q     E+P++NLPPKILC
Sbjct: 37  DELYTELWKACAGPLVEVPRYGERVFYFPQGHMEQLVASTNQGVVDQEIPVFNLPPKILC 96

Query: 100 EVVYAQLKAEPGTDEVFAQITLLPRPEIDE-LSLEVGNSPPL--PPKLNVCSFSKKLTPS 156
            V+   LKAE  TDEV+AQITL P  +  E  SL+    PPL  P K  V SF K LT S
Sbjct: 97  RVLSVTLKAEHETDEVYAQITLQPEEDQSEPTSLD----PPLVEPAKPTVDSFVKILTAS 152

Query: 157 DTSTHGGFSVPKRHADECLPPLDMSKDPPLQELVAKDLHGLEWRFRHIYRGQPKRHLLTS 216
           DTSTHGGFSV ++HA ECLP LDM++  P QELVA+DLHG EWRF+HI+RGQP+RHLLT+
Sbjct: 153 DTSTHGGFSVLRKHATECLPSLDMTQPTPTQELVARDLHGYEWRFKHIFRGQPRRHLLTT 212

Query: 217 GWSVFVTSKKLVAGDVCIFLRGGDGELRVGVRRAMKLQNNASTSVISSLSMQHGILAGAF 276
           GWS FVTSK+LVAGD  +FLRG  G+LRVGVRR  K Q+    SVISS SM+ G+LA A 
Sbjct: 213 GWSTFVTSKRLVAGDAFVFLRGETGDLRVGVRRLAKQQSTMPASVISSQSMRLGVLATAS 272

Query: 277 HAISTGTRFTVYYHPWTRPAEFLVPFSQYMKSAEIDYSIGTRFRMVFEGEECADQRIAGT 336
           HA++T T F V+Y P  R ++F++  ++YM + +  +S+G R+RM FEGEE  ++   GT
Sbjct: 273 HAVTTTTIFVVFYKP--RISQFIISVNKYMMAMKNGFSLGMRYRMRFEGEESPERIFTGT 330

Query: 337 VVGTEDVDHIRWPASEWRCLKVKWDATTDSITRPARVSPWNIEPIERTHKRPASVQHQ-- 394
           ++G+ D+   +WPAS+WR L+++WD  + SI RP +VSPW IEP   +   P   Q Q  
Sbjct: 331 IIGSGDLSS-QWPASKWRSLQIQWDEPS-SIQRPNKVSPWEIEPFSPSALTPTPTQQQSK 388

Query: 395 QKRLRP 400
            KR RP
Sbjct: 389 SKRSRP 394



 Score = 90.5 bits (223), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 55/152 (36%), Positives = 79/152 (51%), Gaps = 14/152 (9%)

Query: 551 LFGVNLVNSPPELPSPQMATSNELESPCSVPPTSQSSISETIQVSEPSKSVSGILSEKQC 610
           LFG +L + P     P       ++S  S           T +  +P+ S S     K+ 
Sbjct: 458 LFGFDLTSKPASATIPHDKQLISVDSNIS---------DSTTKCQDPNSSNS----PKEQ 504

Query: 611 KNCYVSRSCTKVIKFGTALGRSVDLTRFHGYDELISELDQMFDFNGSLIDGNSGFHIAYM 670
           K    +RS  KV   GTA+GR+VDLT    YDELI EL++MF+  G L      + I + 
Sbjct: 505 KQQTSTRSRIKVQMQGTAVGRAVDLTLLRSYDELIKELEKMFEIEGEL-SPKDKWAIVFT 563

Query: 671 DDEGDMMLVGDNPWQDFQCAVRRMFICPKEDI 702
           DDEGD MLVGD+PW +F    +++FI P +++
Sbjct: 564 DDEGDRMLVGDDPWNEFCKMAKKLFIYPSDEV 595


>sp|Q9C8N7|ARFV_ARATH Auxin response factor 22 OS=Arabidopsis thaliana GN=ARF22 PE=2 SV=2
          Length = 598

 Score =  391 bits (1004), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 244/660 (36%), Positives = 351/660 (53%), Gaps = 92/660 (13%)

Query: 38  GGKNELYNELWRACAGPLVYVPRVGDIVYYFLQGHMEQVEAYNSQDDKAELPIYNLPPKI 97
           G K+ +Y +LW+ CAGPL  +P++G+ +YYF QG++E VEA   ++     PI +LP K+
Sbjct: 19  GSKSYMYEQLWKLCAGPLCDIPKLGEKIYYFPQGNIELVEASTREELNELKPICDLPSKL 78

Query: 98  LCEVVYAQLKAEPGTDEVFAQITLLPRPEIDELSLEVGNSPPLPPKLNVCSFSKKLTPSD 157
            C V+  QLK E  +DE +A+ITL+P  +  ++ +   N     P +N  SF+K LT SD
Sbjct: 79  QCRVIAIQLKVENNSDETYAEITLMP--DTTQVVIPTQNENQFRPLVN--SFTKVLTASD 134

Query: 158 TSTHGGFSVPKRHADECLPPLDMSKDPPLQELVAKDLHGLEWRFRHIYRGQPKRHLLTSG 217
           TS  GGF VPK+HA ECLPPLDMS+  P QEL+A DLHG +WRF H YRG P+RHLLT+G
Sbjct: 135 TS--GGFFVPKKHAIECLPPLDMSQPLPTQELLATDLHGNQWRFNHNYRGTPQRHLLTTG 192

Query: 218 WSVFVTSKKLVAGDVCIFLRGGDGELRVGVRRAMKLQNNASTSVISSLSMQHGILAGAFH 277
           W+ F TSKKLVAGDV +F+RG  GELRVG+RRA   Q N  +S+IS  SM+HG++A A H
Sbjct: 193 WNAFTTSKKLVAGDVIVFVRGETGELRVGIRRAGHQQGNIPSSIISIESMRHGVIASAKH 252

Query: 278 AISTGTRFTVYYHPWTRPAEFLVPFSQYMKSAEIDYSIGTRFRMVFEGEECADQRIAGTV 337
           A      F V Y P  R ++F+V + +++ +    +++G+RF M FEG++ +++R  GT+
Sbjct: 253 AFDNQCMFIVVYKP--RSSQFIVSYDKFLDAVNNKFNVGSRFTMRFEGDDFSERRYFGTI 310

Query: 338 VGTEDVDHIRWPASEWRCLKVKWDATTDSITRPARVSPWNIEPIERTHKRPASVQHQQKR 397
           +G  D     W  SEWR L+V+WD    S +RP +VSPW IE +      P     + KR
Sbjct: 311 IGVSDFSP-HWKCSEWRNLEVQWDEFA-SFSRPNKVSPWEIEHLMPALNVPRPSLLKNKR 368

Query: 398 LRPNDASSPWFSSLFSNGVFQGQENRVTGVKALGAAKTPLLPSLVRPPNPVWAQMQSGLE 457
           LR                           V  +G++ + LLP       P+  Q Q   +
Sbjct: 369 LRE--------------------------VNEIGSSSSHLLP-------PILTQGQEIGQ 395

Query: 458 NKLKFPMHDPF-YMCLNRMVSLPGGSLMSPGLSNHWPASPFAPYEVCETAAQSKNLSVPN 516
             +  PM+    Y      V  P   LMS      +P  P                    
Sbjct: 396 LSVASPMNISLTYRDTTEDVMNPSRLLMS------YPVQPMPKL---------------- 433

Query: 517 ASSENSGSQMCMALELKDENRTPLAQPNGGSRYMLFGVNLVNSPPELPSPQMATSNELES 576
               N  +QM   +E     +T       G+ + LFGV+LV +P  +  P     +E+  
Sbjct: 434 ----NYNNQMVTQIEENITTKT-------GTNFRLFGVSLV-TPSVIKDPIEEIGSEISK 481

Query: 577 PCSVPPTSQSSISETIQVSEPSKSVSGILSEKQCKNCYVSRSCTKVIKFGTALGRSVDLT 636
                 T      ++  +  P        +E Q K    +R+CTKV   G  + R+VDL+
Sbjct: 482 -----LTEGKKFGQSQTLRSP--------TEIQSKQFSSTRTCTKVQMQGVTIERAVDLS 528

Query: 637 RFHGYDELISELDQMFDFNGSLIDGNSGFHIAYMDDEGDMMLVGDNPWQDFQCAVRRMFI 696
             +GYD+LI EL+++FD  G L   N  + IA+ D + D MLVGD+PW +F   V+++ I
Sbjct: 529 VLNGYDQLILELEELFDLKGQLQTRNQ-WEIAFTDSDDDKMLVGDDPWPEFCNMVKKILI 587


>sp|Q9LQE3|ARFO_ARATH Putative auxin response factor 15 OS=Arabidopsis thaliana GN=ARF15
           PE=3 SV=2
          Length = 593

 Score =  389 bits (998), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 239/658 (36%), Positives = 347/658 (52%), Gaps = 90/658 (13%)

Query: 40  KNELYNELWRACAGPLVYVPRVGDIVYYFLQGHMEQVEAYNSQDDKAELPIYNLPPKILC 99
           K+ +Y +LW+ CAGPL  +P++G+ VYYF QG++E VEA   ++     PI +LP K+ C
Sbjct: 21  KSYMYEQLWKLCAGPLCDIPKLGEKVYYFPQGNIELVEASTREELNELQPICDLPSKLQC 80

Query: 100 EVVYAQLKAEPGTDEVFAQITLLPRPEIDELSLEVGNSPPLPPKLNVCSFSKKLTPSDTS 159
            V+   LK E  +DE +A+ITL+P  +  ++ +   N     P +N  SF+K LT SD S
Sbjct: 81  RVIAIHLKVENNSDETYAKITLMP--DTTQVVIPTQNENQFRPLVN--SFTKVLTASDIS 136

Query: 160 THGGFSVPKRHADECLPPLDMSKDPPLQELVAKDLHGLEWRFRHIYRGQPKRHLLTSGWS 219
            +G FSVPK+HA ECLPPLDMS+  P QEL+A DLHG +W FRH YRG P+RHLLT+GW+
Sbjct: 137 ANGVFSVPKKHAIECLPPLDMSQPLPAQELLAIDLHGNQWSFRHSYRGTPQRHLLTTGWN 196

Query: 220 VFVTSKKLVAGDVCIFLRGGDGELRVGVRRAMKLQNNASTSVISSLSMQHGILAGAFHAI 279
            F TSKKLV GDV +F+RG  GELRVG+RRA   Q N  +S++S   M+HG++A A HA 
Sbjct: 197 EFTTSKKLVKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVIASAKHAF 256

Query: 280 STGTRFTVYYHPWTRPAEFLVPFSQYMKSAEIDYSIGTRFRMVFEGEECADQRIAGTVVG 339
                F V Y P  R ++F+V + +++ +    +++G+RF M FEG++ +++R  GT++G
Sbjct: 257 DNQCMFIVVYKP--RSSQFIVSYDKFLDAVNNKFNVGSRFTMRFEGDDLSERRYFGTIIG 314

Query: 340 TEDVDHIRWPASEWRCLKVKWDATTDSITRPARVSPWNIEPIERTHKRPASVQHQQKRLR 399
             +     W  S+WR L+V+WD    S  RP +VSPW IE +      P S   + KRLR
Sbjct: 315 VSNFSP-HWKCSDWRSLEVQWDEFA-SFLRPNKVSPWEIEHLMPALNVPRSSFLKNKRLR 372

Query: 400 PNDASSPWFSSLFSNGVFQGQENRVTGVKALGAAKTPLLPSLVRPPNPVWAQMQSGLENK 459
                                      V   G++ + LLP       P+  Q Q   +  
Sbjct: 373 E--------------------------VNEFGSSSSHLLP-------PILTQGQEIGQLS 399

Query: 460 LKFPMH-DPFYMCLNRMVSLPGGSLMSPGLSNHWPASPFAPYEVCETAAQSKNLSVPNAS 518
           +  PM+    Y         P   LMS      +P  P                      
Sbjct: 400 VASPMNISLLYRETTEDAMNPSRLLMS------YPVQPMP-------------------- 433

Query: 519 SENSGSQMCMALELKDENRTPLAQPNGGSRYMLFGVNLVNSPPELPSPQMATSNELESPC 578
             N  +QM   +E   EN T  A    G+ + LFGV+L  +PP +  P     +++    
Sbjct: 434 KRNYNNQMVTQIE---ENITTKA----GTNFRLFGVSLA-TPPVIKDPIEQIGSDISK-- 483

Query: 579 SVPPTSQSSISETIQVSEPSKSVSGILSEKQCKNCYVSRSCTKVIKFGTALGRSVDLTRF 638
               T      ++  +  P+K         Q K    +R+CTKV   G  +GR+VDL+  
Sbjct: 484 ---LTEGKKFGQSQTLRSPTKI--------QSKQFSSTRTCTKVQMQGVTIGRAVDLSVL 532

Query: 639 HGYDELISELDQMFDFNGSLIDGNSGFHIAYMDDEGDMMLVGDNPWQDFQCAVRRMFI 696
           +GYD+LI EL+++FD  G L   N  + I +   + D MLVGD+PW +F   V+R++I
Sbjct: 533 NGYDQLILELEKLFDLKGQLQTRNQ-WKIIFTGSDEDEMLVGDDPWPEFCNMVKRIYI 589


>sp|Q9C5W9|ARFR_ARATH Auxin response factor 18 OS=Arabidopsis thaliana GN=ARF18 PE=2 SV=1
          Length = 602

 Score =  386 bits (992), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 202/374 (54%), Positives = 262/374 (70%), Gaps = 19/374 (5%)

Query: 40  KNELYNELWRACAGPLVYVPRVGDIVYYFLQGHMEQVEAYNSQD-DKAELPIYNLPPKIL 98
           +++LY ELW+ CAGPLV VPR  + V+YF QGHMEQ+ A  +Q  +  E+P+++LPPKIL
Sbjct: 19  QDQLYTELWKVCAGPLVEVPRAQERVFYFPQGHMEQLVASTNQGINSEEIPVFDLPPKIL 78

Query: 99  CEVVYAQLKAEPGTDEVFAQITLLPRPEIDE-LSLEVGNSPPL--PPKLNVCSFSKKLTP 155
           C V+   LKAE  TDEV+AQITL P  +  E  SL+    PP+  P K    SF K LT 
Sbjct: 79  CRVLDVTLKAEHETDEVYAQITLQPEEDQSEPTSLD----PPIVGPTKQEFHSFVKILTA 134

Query: 156 SDTSTHGGFSVPKRHADECLPPLDMSKDPPLQELVAKDLHGLEWRFRHIYRGQPKRHLLT 215
           SDTSTHGGFSV ++HA ECLP LDM++  P QELV +DLHG EWRF+HI+RGQP+RHLLT
Sbjct: 135 SDTSTHGGFSVLRKHATECLPSLDMTQATPTQELVTRDLHGFEWRFKHIFRGQPRRHLLT 194

Query: 216 SGWSVFVTSKKLVAGDVCIFLRGGDGELRVGVRRAMKLQNNASTSVISSLSMQHGILAGA 275
           +GWS FV+SK+LVAGD  +FLRG +G+LRVGVRR  + Q+   TSVISS SM  G+LA A
Sbjct: 195 TGWSTFVSSKRLVAGDAFVFLRGENGDLRVGVRRLARHQSTMPTSVISSQSMHLGVLATA 254

Query: 276 FHAISTGTRFTVYYHPWTRPAEFLVPFSQYMKSAEIDYSIGTRFRMVFEGEECADQRIAG 335
            HA+ T T F V+Y P  R ++F+V  ++YM++ +  +S+GTRFRM FEGEE  ++   G
Sbjct: 255 SHAVRTTTIFVVFYKP--RISQFIVGVNKYMEAIKHGFSLGTRFRMRFEGEESPERIFTG 312

Query: 336 TVVGTEDVDHIRWPASEWRCLKVKWDATTDSITRPARVSPWNIEPIERTHKRPASVQHQQ 395
           T+VG+ D+   +WPAS+WR L+V+WD  T ++ RP +VSPW IEP   T   P S   QQ
Sbjct: 313 TIVGSGDLSS-QWPASKWRSLQVQWDEPT-TVQRPDKVSPWEIEPFLATS--PISTPAQQ 368

Query: 396 -----KRLRPNDAS 404
                KR RP + S
Sbjct: 369 PQSKCKRSRPIEPS 382



 Score = 91.7 bits (226), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 56/155 (36%), Positives = 79/155 (50%), Gaps = 22/155 (14%)

Query: 549 YMLFGVNLV-NSPPELPSPQMATSNELESPCSVPPTSQSSISETIQVSEPSKSVSGILSE 607
           Y LFG +L  NSP  +P  +        + C  P T  S                  +SE
Sbjct: 440 YRLFGFDLTSNSPAPIPQDKQPMDTCGAAKCQEPITPTS------------------MSE 481

Query: 608 KQCKNCYVSRSCTKVIKFGTALGRSVDLTRFHGYDELISELDQMFDFNGSLIDGNSGFHI 667
           +  K    SRS TKV   G A+GR+VDLT    YDELI EL++MF+  G L+     + +
Sbjct: 482 Q--KKQQTSRSRTKVQMQGIAVGRAVDLTLLKSYDELIDELEEMFEIQGQLL-ARDKWIV 538

Query: 668 AYMDDEGDMMLVGDNPWQDFQCAVRRMFICPKEDI 702
            + DDEGDMML GD+PW +F    +++FI   +++
Sbjct: 539 VFTDDEGDMMLAGDDPWNEFCKMAKKIFIYSSDEV 573


>sp|Q2QM84|ARFY_ORYSJ Auxin response factor 25 OS=Oryza sativa subsp. japonica GN=ARF25
           PE=2 SV=1
          Length = 899

 Score =  348 bits (893), Expect = 8e-95,   Method: Compositional matrix adjust.
 Identities = 188/397 (47%), Positives = 255/397 (64%), Gaps = 23/397 (5%)

Query: 34  PAEAGGKNELYNELWRACAGPLVYVPRVGDIVYYFLQGHMEQVEAYNSQDDKAELPIY-N 92
           P   G +  L +ELW ACAGPLV +P V   V YF QGH EQV A  +++  A++P Y N
Sbjct: 16  PENDGEQRCLNSELWHACAGPLVSLPVVRSRVVYFPQGHSEQVAASTNKEVDAQIPNYPN 75

Query: 93  LPPKILCEVVYAQLKAEPGTDEVFAQITLLPRPEIDELSLEVGNSPPLPPKLNVCS---- 148
           LPP+++C++    + A+  TDEV+AQ+TL P      LS E    P LP +L   S    
Sbjct: 76  LPPQLICQLHNVTMHADAETDEVYAQMTLQP------LSPEEQKEPFLPMELGAASKQPT 129

Query: 149 --FSKKLTPSDTSTHGGFSVPKRHADECLPPLDMSKDPPLQELVAKDLHGLEWRFRHIYR 206
             F K LT SDTSTHGGFSVP+R A++  PPLD S+ PP QEL+A+DLH  EW+FRHI+R
Sbjct: 130 NYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFR 189

Query: 207 GQPKRHLLTSGWSVFVTSKKLVAGDVCIFLRGGDGELRVGVRRAMKLQNNASTSVISSLS 266
           GQPKRHLLT+GWSVFV++K+LVAGD  IF+   + +L +G+RRA + Q    +SV+SS S
Sbjct: 190 GQPKRHLLTTGWSVFVSAKRLVAGDSVIFIWNDNNQLLLGIRRANRQQTVMPSSVLSSDS 249

Query: 267 MQHGILAGAFHAISTGTRFTVYYHPWTRPAEFLVPFSQYMKSA-EIDYSIGTRFRMVFEG 325
           M  G+LA A HA +T +RFT++Y+P   P+EF++P ++Y+K+      S+G RFRM+FE 
Sbjct: 250 MHIGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFET 309

Query: 326 EECADQRIAGTVVGTEDVDHIRWPASEWRCLKVKWDATTDSITRPARVSPWNIEPIERTH 385
           EE + +R  GT+    D+D +RWP S WR +KV WD +T    +P RVS W IEP+    
Sbjct: 310 EESSVRRYMGTITSISDLDSVRWPNSHWRSVKVGWDESTTGDKQP-RVSLWEIEPLTTFP 368

Query: 386 KRPASVQHQQKRLRPNDASSPWFSSLFSNGVFQGQEN 422
             P++   + KR        PW S L  +G+F G  N
Sbjct: 369 MYPSAFPLRLKR--------PWASGLPMHGMFNGGGN 397



 Score = 71.6 bits (174), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 36/88 (40%), Positives = 58/88 (65%), Gaps = 2/88 (2%)

Query: 620 TKVIKFGTALGRSVDLTRFHGYDELISELDQMFDFNGSLID-GNSGFHIAYMDDEGDMML 678
            KV K G+ LGRS+D++RF  Y EL SEL+++F   G L D   SG+ + ++D E D++L
Sbjct: 769 VKVYKSGS-LGRSLDISRFSSYCELRSELERLFGLEGQLEDPVRSGWQLVFVDRENDILL 827

Query: 679 VGDNPWQDFQCAVRRMFICPKEDIDGVI 706
           VGD+PWQ+F  +V  + I   +++  ++
Sbjct: 828 VGDDPWQEFANSVWCIKILSPQEVQQLV 855


>sp|Q653U3|ARFQ_ORYSJ Auxin response factor 17 OS=Oryza sativa subsp. japonica GN=ARF17
           PE=2 SV=1
          Length = 917

 Score =  344 bits (883), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 180/364 (49%), Positives = 245/364 (67%), Gaps = 16/364 (4%)

Query: 27  ALPTKHKPAEAGGKNELYN-ELWRACAGPLVYVPRVGDIVYYFLQGHMEQVEAYNSQDDK 85
            LP +    EA  + +  N ELW ACAGPLV +P VG  V YF QGH EQV A  +++ +
Sbjct: 10  VLPAQAASPEAVEEQKCLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEME 69

Query: 86  AELPIY-NLPPKILCEVVYAQLKAEPGTDEVFAQITLLPRPEIDELSLEVGNSPPLPPKL 144
           +++P Y NLPP+++C++    + A+  TDEV+AQ+TL P      LS +    P LP +L
Sbjct: 70  SQIPNYPNLPPQLICQLHNVTMHADAETDEVYAQMTLQP------LSPQELKDPYLPAEL 123

Query: 145 NVCS------FSKKLTPSDTSTHGGFSVPKRHADECLPPLDMSKDPPLQELVAKDLHGLE 198
              +      F K LT SDTSTHGGFSVP+R A++  PPLD ++ PP QEL+AKDLHG E
Sbjct: 124 GSANKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFTQQPPAQELIAKDLHGNE 183

Query: 199 WRFRHIYRGQPKRHLLTSGWSVFVTSKKLVAGDVCIFLRGGDGELRVGVRRAMKLQNNAS 258
           W+FRHI+RGQPKRHLLT+GWSVFV++K+LVAGD  +F+   + +L +G+RRA + Q    
Sbjct: 184 WKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNDNNQLLLGIRRANRPQTVMP 243

Query: 259 TSVISSLSMQHGILAGAFHAISTGTRFTVYYHPWTRPAEFLVPFSQYMKSA-EIDYSIGT 317
           +SV+SS SM  G+LA A HA ST +RFT++Y+P   P+EF++P S+Y+K+      S+G 
Sbjct: 244 SSVLSSDSMHIGLLAAAAHAASTNSRFTIFYNPRASPSEFVIPLSKYVKAVYHTRISVGM 303

Query: 318 RFRMVFEGEECADQRIAGTVVGTEDVDHIRWPASEWRCLKVKWDATTDSITRPARVSPWN 377
           RFRM+FE EE + +R  GT+ G  D+D  RWP S WR +KV WD +T    +P RVS W 
Sbjct: 304 RFRMLFETEESSVRRYMGTITGISDLDAARWPNSHWRSVKVGWDESTAGERQP-RVSLWE 362

Query: 378 IEPI 381
           IEP+
Sbjct: 363 IEPL 366



 Score = 68.6 bits (166), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 39/105 (37%), Positives = 62/105 (59%), Gaps = 5/105 (4%)

Query: 602 SGILSEKQCKNCYVSR---SCTKVIKFGTALGRSVDLTRFHGYDELISELDQMFDFNGSL 658
           SG +   Q  +  ++R   +  KV K GT  GRS+D+TRF  Y EL  EL ++F   G L
Sbjct: 768 SGYVPCSQNSDQVINRPPATFVKVYKSGT-YGRSLDITRFSSYHELRRELGRLFGLEGQL 826

Query: 659 IDG-NSGFHIAYMDDEGDMMLVGDNPWQDFQCAVRRMFICPKEDI 702
            +   SG+ + ++D E D++LVGD+PWQ+F  +V  + I   +++
Sbjct: 827 ENPLRSGWQLVFVDREDDVLLVGDDPWQEFVNSVSCIKILSPQEV 871


>sp|A2YG67|ARFQ_ORYSI Auxin response factor 17 OS=Oryza sativa subsp. indica GN=ARF17
           PE=2 SV=1
          Length = 917

 Score =  344 bits (883), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 183/380 (48%), Positives = 250/380 (65%), Gaps = 16/380 (4%)

Query: 27  ALPTKHKPAEAGGKNELYN-ELWRACAGPLVYVPRVGDIVYYFLQGHMEQVEAYNSQDDK 85
            LP +    EA  + +  N ELW ACAGPLV +P VG  V YF QGH EQV A  +++ +
Sbjct: 10  VLPAQAASPEAVEEQKCLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEME 69

Query: 86  AELPIY-NLPPKILCEVVYAQLKAEPGTDEVFAQITLLPRPEIDELSLEVGNSPPLPPKL 144
           +++P Y NLPP+++C++    + A+  TDEV+AQ+TL P      LS +    P LP +L
Sbjct: 70  SQIPNYPNLPPQLICQLHNVTMHADAETDEVYAQMTLQP------LSPQELKDPYLPAEL 123

Query: 145 NVCS------FSKKLTPSDTSTHGGFSVPKRHADECLPPLDMSKDPPLQELVAKDLHGLE 198
              +      F K LT SDTSTHGGFSVP+R A++  PPLD ++ PP QEL+AKDLHG E
Sbjct: 124 GSANKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFTQQPPAQELIAKDLHGNE 183

Query: 199 WRFRHIYRGQPKRHLLTSGWSVFVTSKKLVAGDVCIFLRGGDGELRVGVRRAMKLQNNAS 258
           W+FRHI+RGQPKRHLLT+GWSVFV++K+LVAGD  +F+   + +L +G+RRA + Q    
Sbjct: 184 WKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNDNNQLLLGIRRANRPQTVMP 243

Query: 259 TSVISSLSMQHGILAGAFHAISTGTRFTVYYHPWTRPAEFLVPFSQYMKSA-EIDYSIGT 317
           +SV+SS SM  G+LA A HA ST +RFT++Y+P   P+EF++P S+Y+K+      S+G 
Sbjct: 244 SSVLSSDSMHIGLLAAAAHAASTNSRFTIFYNPRASPSEFVIPLSKYVKAVYHTRISVGM 303

Query: 318 RFRMVFEGEECADQRIAGTVVGTEDVDHIRWPASEWRCLKVKWDATTDSITRPARVSPWN 377
           RFRM+FE EE + +R  GT+ G  D+D  RWP S WR +KV WD +T    +P RVS W 
Sbjct: 304 RFRMLFETEESSVRRYMGTITGISDLDAARWPNSHWRSVKVGWDESTAGERQP-RVSLWE 362

Query: 378 IEPIERTHKRPASVQHQQKR 397
           IEP+      P+    + KR
Sbjct: 363 IEPLTTFPMYPSPFPLRLKR 382



 Score = 68.6 bits (166), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/105 (37%), Positives = 62/105 (59%), Gaps = 5/105 (4%)

Query: 602 SGILSEKQCKNCYVSR---SCTKVIKFGTALGRSVDLTRFHGYDELISELDQMFDFNGSL 658
           SG +   Q  +  ++R   +  KV K GT  GRS+D+TRF  Y EL  EL ++F   G L
Sbjct: 768 SGYVPCSQNSDQVINRPPATFVKVYKSGT-YGRSLDITRFSSYHELRRELGRLFGLEGQL 826

Query: 659 IDG-NSGFHIAYMDDEGDMMLVGDNPWQDFQCAVRRMFICPKEDI 702
            +   SG+ + ++D E D++LVGD+PWQ+F  +V  + I   +++
Sbjct: 827 ENPLRSGWQLVFVDREDDVLLVGDDPWQEFVNSVSCIKILSPQEV 871


>sp|Q6H6V4|ARFF_ORYSJ Auxin response factor 6 OS=Oryza sativa subsp. japonica GN=ARF6
           PE=1 SV=1
          Length = 908

 Score =  340 bits (872), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 186/397 (46%), Positives = 257/397 (64%), Gaps = 25/397 (6%)

Query: 34  PAEAGGKNELYNELWRACAGPLVYVPRVGDIVYYFLQGHMEQVEAYNSQDDKAELPIY-N 92
           P  A  +  L +ELW ACAGPLV +P VG  V YF QGH EQV A  +++ ++++P Y N
Sbjct: 18  PEVAEEQKCLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEMESQIPNYPN 77

Query: 93  LPPKILCEVVYAQLKAEPGTDEVFAQITLLPRPEIDELSLEVGNSPPLPPKLNVCS---- 148
           LPP+++C++    + A+  TDEV+AQ+TL P      LS +    P LP +L   S    
Sbjct: 78  LPPQLICQLHNVTMHADAETDEVYAQMTLQP------LSPQELKDPFLPAELGTASKQPT 131

Query: 149 --FSKKLTPSDTSTHGGFSVPKRHADECLPPLDMSKDPPLQELVAKDLHGLEWRFRHIYR 206
             F K LT SDTSTHGGFSVP+R A++  PPLD ++ PP QEL+AKDLHG EW+FRHI+R
Sbjct: 132 NYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFTQQPPAQELMAKDLHGNEWKFRHIFR 191

Query: 207 GQPKRHLLTSGWSVFVTSKKLVAGDVCIFLRGGDGELRVGVRRAMKLQNNASTSVISSLS 266
           GQPKRHLLT+GWSVFV++K+LVAGD  +F+     +L +G+RRA + Q    +SV+SS S
Sbjct: 192 GQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNDSNQLLLGIRRANRPQTVMPSSVLSSDS 251

Query: 267 MQHGILAGAFHAISTGTRFTVYYHPWTRPAEFLVPFSQYMKSA-EIDYSIGTRFRMVFEG 325
           M  G+LA A HA ST +RFT++Y+P   P+EF++P ++Y+K+      S+G RFRM+FE 
Sbjct: 252 MHIGLLAAAAHAASTNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRISVGMRFRMLFET 311

Query: 326 EECADQRIAGTVVGTEDVDHIRWPASEWRCLKVKWDATTDSITRPARVSPWNIEPIERTH 385
           EE + +R  GT+ G  D+D +RW  S WR +KV WD +T    +P RVS W IEP+    
Sbjct: 312 EESSVRRYMGTITGISDLDPVRWMNSHWRSVKVGWDESTAGERQP-RVSLWEIEPLTTFP 370

Query: 386 KRPASVQHQQKRLRPNDASSPWFSSLFSNGVFQGQEN 422
             P+    + KR        PW + L S  ++ G+E+
Sbjct: 371 MYPSPFPLRLKR--------PWPTGLPS--LYGGKED 397



 Score = 68.9 bits (167), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 35/83 (42%), Positives = 54/83 (65%), Gaps = 2/83 (2%)

Query: 621 KVIKFGTALGRSVDLTRFHGYDELISELDQMFDFNGSLIDG-NSGFHIAYMDDEGDMMLV 679
           KV K GT +GR +D+TRF  Y EL SE+ ++F   G L D   SG+ + ++D E D++LV
Sbjct: 781 KVYKSGT-VGRLLDITRFSSYHELRSEVGRLFGLEGQLEDPLRSGWQLVFVDREDDVLLV 839

Query: 680 GDNPWQDFQCAVRRMFICPKEDI 702
           GD+PWQ+F  +V  + I   +++
Sbjct: 840 GDDPWQEFVNSVSCIKILSPQEV 862


>sp|A2X1A1|ARFF_ORYSI Auxin response factor 6 OS=Oryza sativa subsp. indica GN=ARF6 PE=2
           SV=1
          Length = 908

 Score =  340 bits (872), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 186/397 (46%), Positives = 257/397 (64%), Gaps = 25/397 (6%)

Query: 34  PAEAGGKNELYNELWRACAGPLVYVPRVGDIVYYFLQGHMEQVEAYNSQDDKAELPIY-N 92
           P  A  +  L +ELW ACAGPLV +P VG  V YF QGH EQV A  +++ ++++P Y N
Sbjct: 18  PEVAEEQKCLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEMESQIPNYPN 77

Query: 93  LPPKILCEVVYAQLKAEPGTDEVFAQITLLPRPEIDELSLEVGNSPPLPPKLNVCS---- 148
           LPP+++C++    + A+  TDEV+AQ+TL P      LS +    P LP +L   S    
Sbjct: 78  LPPQLICQLHNVTMHADAETDEVYAQMTLQP------LSPQELKDPFLPAELGTASKQPT 131

Query: 149 --FSKKLTPSDTSTHGGFSVPKRHADECLPPLDMSKDPPLQELVAKDLHGLEWRFRHIYR 206
             F K LT SDTSTHGGFSVP+R A++  PPLD ++ PP QEL+AKDLHG EW+FRHI+R
Sbjct: 132 NYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFTQQPPAQELMAKDLHGNEWKFRHIFR 191

Query: 207 GQPKRHLLTSGWSVFVTSKKLVAGDVCIFLRGGDGELRVGVRRAMKLQNNASTSVISSLS 266
           GQPKRHLLT+GWSVFV++K+LVAGD  +F+     +L +G+RRA + Q    +SV+SS S
Sbjct: 192 GQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNDSNQLLLGIRRANRPQTVMPSSVLSSDS 251

Query: 267 MQHGILAGAFHAISTGTRFTVYYHPWTRPAEFLVPFSQYMKSA-EIDYSIGTRFRMVFEG 325
           M  G+LA A HA ST +RFT++Y+P   P+EF++P ++Y+K+      S+G RFRM+FE 
Sbjct: 252 MHIGLLAAAAHAASTNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRISVGMRFRMLFET 311

Query: 326 EECADQRIAGTVVGTEDVDHIRWPASEWRCLKVKWDATTDSITRPARVSPWNIEPIERTH 385
           EE + +R  GT+ G  D+D +RW  S WR +KV WD +T    +P RVS W IEP+    
Sbjct: 312 EESSVRRYMGTITGISDLDPVRWMNSHWRSVKVGWDESTAGERQP-RVSLWEIEPLTTFP 370

Query: 386 KRPASVQHQQKRLRPNDASSPWFSSLFSNGVFQGQEN 422
             P+    + KR        PW + L S  ++ G+E+
Sbjct: 371 MYPSPFPLRLKR--------PWPTGLPS--LYGGKED 397



 Score = 68.9 bits (167), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 35/83 (42%), Positives = 54/83 (65%), Gaps = 2/83 (2%)

Query: 621 KVIKFGTALGRSVDLTRFHGYDELISELDQMFDFNGSLIDG-NSGFHIAYMDDEGDMMLV 679
           KV K GT +GR +D+TRF  Y EL SE+ ++F   G L D   SG+ + ++D E D++LV
Sbjct: 781 KVYKSGT-VGRLLDITRFSSYHELRSEVGRLFGLEGQLEDPLRSGWQLVFVDREDDVLLV 839

Query: 680 GDNPWQDFQCAVRRMFICPKEDI 702
           GD+PWQ+F  +V  + I   +++
Sbjct: 840 GDDPWQEFVNSVSCIKILSPQEV 862


>sp|Q0J951|ARFL_ORYSJ Auxin response factor 12 OS=Oryza sativa subsp. japonica GN=ARF12
           PE=2 SV=1
          Length = 818

 Score =  335 bits (859), Expect = 8e-91,   Method: Compositional matrix adjust.
 Identities = 178/382 (46%), Positives = 246/382 (64%), Gaps = 23/382 (6%)

Query: 40  KNELYNELWRACAGPLVYVPRVGDIVYYFLQGHMEQVEAYNSQDDKAELPIY-NLPPKIL 98
           K  L +ELW ACAGPLV +P VG  V YF QGH EQV A  +++ +  +P Y NLP +++
Sbjct: 25  KKCLNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVEGHIPNYPNLPAQLI 84

Query: 99  CEVVYAQLKAEPGTDEVFAQITLLPRPEIDELSLEVGNSPPLPPKLNVCS------FSKK 152
           C++    + A+  TDEV+AQ+TL P      L+ +  N   LP ++ + S      F K 
Sbjct: 85  CQLHDVTMHADVETDEVYAQMTLQP------LNPQEQNDAYLPAEMGIMSKQPTNYFCKT 138

Query: 153 LTPSDTSTHGGFSVPKRHADECLPPLDMSKDPPLQELVAKDLHGLEWRFRHIYRGQPKRH 212
           LT SDTSTHGGFSVP+R A+   PPLD ++ PP QEL+A+D+H +EW+FRHI+RGQPKRH
Sbjct: 139 LTASDTSTHGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDIEWKFRHIFRGQPKRH 198

Query: 213 LLTSGWSVFVTSKKLVAGDVCIFLRGGDGELRVGVRRAMKLQNNASTSVISSLSMQHGIL 272
           LLT+GWSVFV++K+LVAGD  +F+     +L +G+RRA + Q    +SV+SS SM  G+L
Sbjct: 199 LLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHIGLL 258

Query: 273 AGAFHAISTGTRFTVYYHPWTRPAEFLVPFSQYMKSA-EIDYSIGTRFRMVFEGEECADQ 331
           A A HA +T +RFT++Y+P   P+EF++P S+Y+K+      S+G RFRM+FE EE + +
Sbjct: 259 AAAAHAAATNSRFTIFYNPRASPSEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESSVR 318

Query: 332 RIAGTVVGTEDVDHIRWPASEWRCLKVKWDATTDSITRPARVSPWNIEPIERTHKRPASV 391
           R  GT+    D D +RWP+S WR +KV WD +T    RP RVS W IEP+      P+  
Sbjct: 319 RYMGTITEVSDADPVRWPSSYWRSVKVGWDESTAG-ERPPRVSLWEIEPLTTFPMYPS-- 375

Query: 392 QHQQKRLRPNDASSPWFSSLFS 413
                 L P     PW+S + S
Sbjct: 376 ------LFPLRVKHPWYSGVAS 391



 Score = 76.6 bits (187), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 42/102 (41%), Positives = 63/102 (61%), Gaps = 3/102 (2%)

Query: 602 SGILSEKQCKNCYVSRSCTKVIKFGTALGRSVDLTRFHGYDELISELDQMFDFNGSLID- 660
           SG+L +   +N   +R+  KV K G+ +GRS+D+TRF  Y EL  EL QMF   G L D 
Sbjct: 705 SGLL-QNTGENDPATRTFVKVYKSGS-VGRSLDITRFSNYAELREELGQMFGIKGQLDDP 762

Query: 661 GNSGFHIAYMDDEGDMMLVGDNPWQDFQCAVRRMFICPKEDI 702
             SG+ + ++D E D++L+GD+PW+ F  +V  + I   ED+
Sbjct: 763 DRSGWQLVFVDRENDVLLLGDDPWESFVNSVWYIKILSPEDV 804


>sp|Q258Y5|ARFL_ORYSI Auxin response factor 12 OS=Oryza sativa subsp. indica GN=ARF12
           PE=2 SV=1
          Length = 816

 Score =  335 bits (859), Expect = 8e-91,   Method: Compositional matrix adjust.
 Identities = 178/382 (46%), Positives = 246/382 (64%), Gaps = 23/382 (6%)

Query: 40  KNELYNELWRACAGPLVYVPRVGDIVYYFLQGHMEQVEAYNSQDDKAELPIY-NLPPKIL 98
           K  L +ELW ACAGPLV +P VG  V YF QGH EQV A  +++ +  +P Y NLP +++
Sbjct: 25  KKCLNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVEGHIPNYPNLPAQLI 84

Query: 99  CEVVYAQLKAEPGTDEVFAQITLLPRPEIDELSLEVGNSPPLPPKLNVCS------FSKK 152
           C++    + A+  TDEV+AQ+TL P      L+ +  N   LP ++ + S      F K 
Sbjct: 85  CQLHDVTMHADVETDEVYAQMTLQP------LNPQEQNDAYLPAEMGIMSKQPTNYFCKT 138

Query: 153 LTPSDTSTHGGFSVPKRHADECLPPLDMSKDPPLQELVAKDLHGLEWRFRHIYRGQPKRH 212
           LT SDTSTHGGFSVP+R A+   PPLD ++ PP QEL+A+D+H +EW+FRHI+RGQPKRH
Sbjct: 139 LTASDTSTHGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDIEWKFRHIFRGQPKRH 198

Query: 213 LLTSGWSVFVTSKKLVAGDVCIFLRGGDGELRVGVRRAMKLQNNASTSVISSLSMQHGIL 272
           LLT+GWSVFV++K+LVAGD  +F+     +L +G+RRA + Q    +SV+SS SM  G+L
Sbjct: 199 LLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHIGLL 258

Query: 273 AGAFHAISTGTRFTVYYHPWTRPAEFLVPFSQYMKSA-EIDYSIGTRFRMVFEGEECADQ 331
           A A HA +T +RFT++Y+P   P+EF++P S+Y+K+      S+G RFRM+FE EE + +
Sbjct: 259 AAAAHAAATNSRFTIFYNPRASPSEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESSVR 318

Query: 332 RIAGTVVGTEDVDHIRWPASEWRCLKVKWDATTDSITRPARVSPWNIEPIERTHKRPASV 391
           R  GT+    D D +RWP+S WR +KV WD +T    RP RVS W IEP+      P+  
Sbjct: 319 RYMGTITEVSDADPVRWPSSYWRSVKVGWDESTAG-ERPPRVSLWEIEPLTTFPMYPS-- 375

Query: 392 QHQQKRLRPNDASSPWFSSLFS 413
                 L P     PW+S + S
Sbjct: 376 ------LFPLRVKHPWYSGVAS 391



 Score = 76.6 bits (187), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 42/102 (41%), Positives = 63/102 (61%), Gaps = 3/102 (2%)

Query: 602 SGILSEKQCKNCYVSRSCTKVIKFGTALGRSVDLTRFHGYDELISELDQMFDFNGSLID- 660
           SG+L +   +N   +R+  KV K G+ +GRS+D+TRF  Y EL  EL QMF   G L D 
Sbjct: 703 SGLL-QNTGENDPATRTFVKVYKSGS-VGRSLDITRFSNYAELREELGQMFGIKGQLDDP 760

Query: 661 GNSGFHIAYMDDEGDMMLVGDNPWQDFQCAVRRMFICPKEDI 702
             SG+ + ++D E D++L+GD+PW+ F  +V  + I   ED+
Sbjct: 761 DRSGWQLVFVDRENDVLLLGDDPWESFVNSVWYIKILSPEDV 802


>sp|Q9ZTX9|ARFD_ARATH Auxin response factor 4 OS=Arabidopsis thaliana GN=ARF4 PE=1 SV=1
          Length = 788

 Score =  333 bits (853), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 170/348 (48%), Positives = 225/348 (64%), Gaps = 13/348 (3%)

Query: 43  LYNELWRACAGPLVYVPRVGDIVYYFLQGHMEQVEAYNSQDDKAELPIYNLPPKILCEVV 102
           +Y+ELW ACAGPL  +P+ G++V YF QGH+EQ +A  S     E+P ++L P+I+C VV
Sbjct: 62  IYSELWHACAGPLTCLPKKGNVVVYFPQGHLEQ-DAMVSYSSPLEIPKFDLNPQIVCRVV 120

Query: 103 YAQLKAEPGTDEVFAQITLLPR----------PEIDELSLEVGNSPPLPPKLNVCSFSKK 152
             QL A   TDEV+ Q+TLLP            E+ EL  E   +     K     F K 
Sbjct: 121 NVQLLANKDTDEVYTQVTLLPLQEFSMLNGEGKEVKELGGEEERNGSSSVKRTPHMFCKT 180

Query: 153 LTPSDTSTHGGFSVPKRHADECLPPLDMSKDPPLQELVAKDLHGLEWRFRHIYRGQPKRH 212
           LT SDTSTHGGFSVP+R A++C  PLD  +  P QEL+AKDLHG+EW+FRHIYRGQP+RH
Sbjct: 181 LTASDTSTHGGFSVPRRAAEDCFAPLDYKQQRPSQELIAKDLHGVEWKFRHIYRGQPRRH 240

Query: 213 LLTSGWSVFVTSKKLVAGDVCIFLRGGDGELRVGVRRAMKLQNNASTSVISSLSMQHGIL 272
           LLT+GWS+FV+ K LV+GD  +FLR   GELR+G+RRA + +N    S+I   S  + IL
Sbjct: 241 LLTTGWSIFVSQKNLVSGDAVLFLRDEGGELRLGIRRAARPRNGLPDSIIEKNSCSN-IL 299

Query: 273 AGAFHAISTGTRFTVYYHPWTRPAEFLVPFSQYMKSAEIDYSIGTRFRMVFEGEECADQR 332
           +   +A+ST + F V+Y P    AEF++P+ +Y+ S      IGTRFRM FE ++  ++R
Sbjct: 300 SLVANAVSTKSMFHVFYSPRATHAEFVIPYEKYITSIRSPVCIGTRFRMRFEMDDSPERR 359

Query: 333 IAGTVVGTEDVDHIRWPASEWRCLKVKWDATTDSITRPARVSPWNIEP 380
            AG V G  D+D  RWP S+WRCL V+WD +  S     RVSPW I+P
Sbjct: 360 CAGVVTGVCDLDPYRWPNSKWRCLLVRWDESFVS-DHQERVSPWEIDP 406



 Score = 92.8 bits (229), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 40/87 (45%), Positives = 61/87 (70%)

Query: 617 RSCTKVIKFGTALGRSVDLTRFHGYDELISELDQMFDFNGSLIDGNSGFHIAYMDDEGDM 676
           R CTKV K G+ +GR++DL+R +GYD+L+ EL+++F+  G L D   G+ I Y D E DM
Sbjct: 665 RICTKVHKQGSQVGRAIDLSRLNGYDDLLMELERLFNMEGLLRDPEKGWRILYTDSENDM 724

Query: 677 MLVGDNPWQDFQCAVRRMFICPKEDID 703
           M+VGD+PW DF   V ++ +  KE+++
Sbjct: 725 MVVGDDPWHDFCNVVWKIHLYTKEEVE 751


>sp|Q9ZTX8|ARFF_ARATH Auxin response factor 6 OS=Arabidopsis thaliana GN=ARF6 PE=1 SV=2
          Length = 935

 Score =  330 bits (847), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 175/358 (48%), Positives = 239/358 (66%), Gaps = 16/358 (4%)

Query: 33  KPAEAGGKNELYN-ELWRACAGPLVYVPRVGDIVYYFLQGHMEQVEAYNSQDDKAELPIY 91
           +P E  G+  + N ELW ACAGPLV +P VG  V YF QGH EQV A  +++  A +P Y
Sbjct: 11  QPHEVTGEKRVLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNY 70

Query: 92  -NLPPKILCEVVYAQLKAEPGTDEVFAQITLLPRPEIDELSLEVGNSPPLPPKLNVCS-- 148
            +L P+++C++    + A+  TDEV+AQ+TL P      L+ +    P LP +L V S  
Sbjct: 71  PSLHPQLICQLHNVTMHADVETDEVYAQMTLQP------LNAQEQKDPYLPAELGVPSRQ 124

Query: 149 ----FSKKLTPSDTSTHGGFSVPKRHADECLPPLDMSKDPPLQELVAKDLHGLEWRFRHI 204
               F K LT SDTSTHGGFSVP+R A++  PPLD S+ PP QEL+A+DLH  EW+FRHI
Sbjct: 125 PTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELMARDLHDNEWKFRHI 184

Query: 205 YRGQPKRHLLTSGWSVFVTSKKLVAGDVCIFLRGGDGELRVGVRRAMKLQNNASTSVISS 264
           +RGQPKRHLLT+GWSVFV++K+LVAGD  +F+     +L +G+RRA + Q    +SV+SS
Sbjct: 185 FRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNDKNQLLLGIRRANRPQTVMPSSVLSS 244

Query: 265 LSMQHGILAGAFHAISTGTRFTVYYHPWTRPAEFLVPFSQYMKSA-EIDYSIGTRFRMVF 323
            SM  G+LA A HA +T +RFT++Y+P   P+EF++P ++Y+K+      S+G RFRM+F
Sbjct: 245 DSMHLGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLF 304

Query: 324 EGEECADQRIAGTVVGTEDVDHIRWPASEWRCLKVKWDATTDSITRPARVSPWNIEPI 381
           E EE + +R  GT+ G  D+D  RW  S WR +KV WD +T    +P RVS W IEP+
Sbjct: 305 ETEESSVRRYMGTITGICDLDPTRWANSHWRSVKVGWDESTAGERQP-RVSLWEIEPL 361



 Score = 70.9 bits (172), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 54/165 (32%), Positives = 88/165 (53%), Gaps = 12/165 (7%)

Query: 549 YMLFGVNLVNSPPELP---SPQMATSNELESPCSVPPTS---QSSISETIQVSEPSKSV- 601
           ++LFGVN+ +S   +P   S   +   E     ++P TS    +  S  + ++ PS  + 
Sbjct: 718 HLLFGVNIDSSSLLMPNGMSNLRSIGIEGGDSTTLPFTSSNFNNDFSGNLAMTTPSSCID 777

Query: 602 -SGIL--SEKQCKNCYVSRSCTKVIKFGTALGRSVDLTRFHGYDELISELDQMFDFNGSL 658
            SG L  SE        S +  KV K G+  GRS+D+++F  Y EL SEL +MF   G L
Sbjct: 778 ESGFLQSSENLGSENPQSNTFVKVYKSGS-FGRSLDISKFSSYHELRSELARMFGLEGQL 836

Query: 659 IDG-NSGFHIAYMDDEGDMMLVGDNPWQDFQCAVRRMFICPKEDI 702
            D   SG+ + ++D E D++L+GD+PW +F  +V  + I   +++
Sbjct: 837 EDPVRSGWQLVFVDRENDVLLLGDDPWPEFVSSVWCIKILSPQEV 881


>sp|O23661|ARFC_ARATH Auxin response factor 3 OS=Arabidopsis thaliana GN=ARF3 PE=1 SV=2
          Length = 608

 Score =  330 bits (846), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 163/352 (46%), Positives = 222/352 (63%), Gaps = 33/352 (9%)

Query: 46  ELWRACAGPLVYVPRVGDIVYYFLQGHMEQVEAYNSQDDKAELPIYNLPPKILCEVVYAQ 105
           ELW ACAGPL+ +P+ G +V YF QGH+EQ   +++        IY LPP + C ++  +
Sbjct: 54  ELWHACAGPLISLPKRGSLVLYFPQGHLEQAPDFSA-------AIYGLPPHVFCRILDVK 106

Query: 106 LKAEPGTDEVFAQITLLPRPEIDELSLEVG-----------------NSPPLPPKLNVCS 148
           L AE  TDEV+AQ++LLP  E  E  +  G                 N+P +        
Sbjct: 107 LHAETTTDEVYAQVSLLPESEDIERKVREGIIDVDGGEEDYEVLKRSNTPHM-------- 158

Query: 149 FSKKLTPSDTSTHGGFSVPKRHADECLPPLDMSKDPPLQELVAKDLHGLEWRFRHIYRGQ 208
           F K LT SDTSTHGGFSVP+R A++C PPLD S+  P QEL+A+DLHGLEWRFRHIYRGQ
Sbjct: 159 FCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQPRPSQELLARDLHGLEWRFRHIYRGQ 218

Query: 209 PKRHLLTSGWSVFVTSKKLVAGDVCIFLRGGDGELRVGVRRAMKLQNNASTSVISSLSMQ 268
           P+RHLLT+GWS FV  KKLV+GD  +FLRG DG+LR+GVRRA +++  A+ S   + +M 
Sbjct: 219 PRRHLLTTGWSAFVNKKKLVSGDAVLFLRGDDGKLRLGVRRASQIEGTAALSAQYNQNMN 278

Query: 269 HGILAGAFHAISTGTRFTVYYHPWTRPAEFLVPFSQYMKSAEIDYSIGTRFRMVFEGEEC 328
           H   +   HAIST + F++ Y+P    + F++P  +++K  +  + IG RF+   E E+ 
Sbjct: 279 HNNFSEVAHAISTHSVFSISYNPKASWSNFIIPAPKFLKVVDYPFCIGMRFKARVESEDA 338

Query: 329 ADQRIAGTVVGTEDVDHIRWPASEWRCLKVKWDATTDSITRPARVSPWNIEP 380
           +++R  G + G  D+D IRWP S+WRCL V+WD    +     RVSPW IEP
Sbjct: 339 SERRSPGIISGISDLDPIRWPGSKWRCLLVRWDDIVAN-GHQQRVSPWEIEP 389


>sp|Q9C7I9|ARFT_ARATH Auxin response factor 20 OS=Arabidopsis thaliana GN=ARF20 PE=2 SV=3
          Length = 590

 Score =  330 bits (845), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 164/362 (45%), Positives = 233/362 (64%), Gaps = 10/362 (2%)

Query: 38  GGKNELYNELWRACAGPLVYVPRVGDIVYYFLQGHMEQVEAYNSQDDKAELPIYNLPPKI 97
           G K+ +Y +LW+ CAGPL  +P++G+ VYYF QG++E V+A   ++     PI +LP K+
Sbjct: 19  GSKSYMYEQLWKLCAGPLCDIPKLGENVYYFPQGNIELVDASTREELNELQPICDLPSKL 78

Query: 98  LCEVVYAQLKAEPGTDEVFAQITLLPRPEIDELSLEVGNSPPLPPKLNVCSFSKKLTPSD 157
            C V+   LK E  +DE +A+ITL+P  +  ++ +   +     P +N  SF+K LT SD
Sbjct: 79  QCRVIAIHLKVENNSDETYAEITLMP--DTTQVVIPTQSENQFRPLVN--SFTKVLTASD 134

Query: 158 TSTHGGFSVPKRHADECLPPLDMSKDPPLQELVAKDLHGLEWRFRHIYRGQPKRHLLTSG 217
           TS +GGF VPK+HA ECLPPL +    P QEL+AKDLHG +WRFRH YRG P+RH LT+G
Sbjct: 135 TSAYGGFFVPKKHAIECLPPLPL----PAQELLAKDLHGNQWRFRHSYRGTPQRHSLTTG 190

Query: 218 WSVFVTSKKLVAGDVCIFLRGGDGELRVGVRRAMKLQNNASTSVISSLSMQHGILAGAFH 277
           W+ F TSKKLV GDV +F+RG  GELRVG+RRA   Q N  +S++S   M+HG++A A H
Sbjct: 191 WNEFTTSKKLVKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVIASAKH 250

Query: 278 AISTGTRFTVYYHPWTRPAEFLVPFSQYMKSAEIDYSIGTRFRMVFEGEECADQRIAGTV 337
           A+     F V Y P  R ++F+V + +++ +    + +G+RF M FEG++ +++R  GT+
Sbjct: 251 ALDNQCIFIVVYKPSIRSSQFIVSYDKFLDAMNNKFIVGSRFTMRFEGDDFSERRYFGTI 310

Query: 338 VGTEDVDHIRWPASEWRCLKVKWDATTDSITRPARVSPWNIEPIERTHKRPASVQHQQKR 397
           +G  D     W  SEWR L+V+WD    S +RP +VSPW IE +      P S   + KR
Sbjct: 311 IGVNDFSP-HWKCSEWRSLEVQWDEFA-SFSRPNKVSPWEIEHLMSALNVPRSSLLKNKR 368

Query: 398 LR 399
           LR
Sbjct: 369 LR 370



 Score = 87.0 bits (214), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 62/182 (34%), Positives = 93/182 (51%), Gaps = 22/182 (12%)

Query: 521 NSGSQMCMALELKDENRTPLAQPNGGSRYMLFGVNLVNSPPELPSPQMATSNELESPCSV 580
           N  +QM   +E   EN T  A  N    + LFGV+L            A    ++ P   
Sbjct: 420 NYNNQMVTQIE---ENITTKAVTN----FRLFGVSL------------AIPLVIKDPIEE 460

Query: 581 PPTSQSSISETIQVSEPSKSVSGILSEKQCKNCYVSRSCTKVIKFGTALGRSVDLTRFHG 640
             +  S ++E  +  +     S I  E Q K    +R+CTKV   G  +GR+VDL+  +G
Sbjct: 461 IGSDISKLTEGKKFGQSQTLRSPI--EIQSKQFGSTRTCTKVQMQGVTIGRAVDLSVLNG 518

Query: 641 YDELISELDQMFDFNGSLIDGNSGFHIAYMDDEGDMMLVGDNPWQDFQCAVRRMFICPKE 700
           YD+LI EL+++FD  G L   N  + IA+ D +G  MLVGD+PW +F   V+++ I  KE
Sbjct: 519 YDQLILELEKLFDLKGQLQTRNQ-WKIAFTDSDGYEMLVGDDPWPEFCKMVKKILIYSKE 577

Query: 701 DI 702
           ++
Sbjct: 578 EV 579


>sp|Q9FGV1|ARFH_ARATH Auxin response factor 8 OS=Arabidopsis thaliana GN=ARF8 PE=2 SV=2
          Length = 811

 Score =  327 bits (838), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 171/349 (48%), Positives = 235/349 (67%), Gaps = 11/349 (3%)

Query: 39  GKNELYNELWRACAGPLVYVPRVGDIVYYFLQGHMEQVEAYNSQDDKAELPIY-NLPPKI 97
           G+  L +ELW ACAGPLV +P  G  V YF QGH EQV A  +++    +P Y +LPP++
Sbjct: 15  GEKCLNSELWHACAGPLVSLPSSGSRVVYFPQGHSEQVAATTNKEVDGHIPNYPSLPPQL 74

Query: 98  LCEVVYAQLKAEPGTDEVFAQITLLP-RPEIDE---LSLEVGNSPPLPPKLNVCSFSKKL 153
           +C++    + A+  TDEV+AQ+TL P  PE  +   + +E+G    +P K     F K L
Sbjct: 75  ICQLHNVTMHADVETDEVYAQMTLQPLTPEEQKETFVPIELG----IPSKQPSNYFCKTL 130

Query: 154 TPSDTSTHGGFSVPKRHADECLPPLDMSKDPPLQELVAKDLHGLEWRFRHIYRGQPKRHL 213
           T SDTSTHGGFSVP+R A++  PPLD +  PP QEL+A+DLH +EW+FRHI+RGQPKRHL
Sbjct: 131 TASDTSTHGGFSVPRRAAEKVFPPLDYTLQPPAQELIARDLHDVEWKFRHIFRGQPKRHL 190

Query: 214 LTSGWSVFVTSKKLVAGDVCIFLRGGDGELRVGVRRAMKLQNNASTSVISSLSMQHGILA 273
           LT+GWSVFV++K+LVAGD  IF+R    +L +G+R A + Q    +SV+SS SM  G+LA
Sbjct: 191 LTTGWSVFVSAKRLVAGDSVIFIRNEKNQLFLGIRHATRPQTIVPSSVLSSDSMHIGLLA 250

Query: 274 GAFHAISTGTRFTVYYHPWTRPAEFLVPFSQYMKSA-EIDYSIGTRFRMVFEGEECADQR 332
            A HA +T + FTV++HP    +EF++  S+Y+K+      S+G RFRM+FE EE + +R
Sbjct: 251 AAAHASATNSCFTVFFHPRASQSEFVIQLSKYIKAVFHTRISVGMRFRMLFETEESSVRR 310

Query: 333 IAGTVVGTEDVDHIRWPASEWRCLKVKWDATTDSITRPARVSPWNIEPI 381
             GT+ G  D+D +RWP S WR +KV WD +T    +P RVS W IEP+
Sbjct: 311 YMGTITGISDLDSVRWPNSHWRSVKVGWDESTAGERQP-RVSLWEIEPL 358



 Score = 69.3 bits (168), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 36/95 (37%), Positives = 57/95 (60%), Gaps = 2/95 (2%)

Query: 609 QCKNCYVSRSCTKVIKFGTALGRSVDLTRFHGYDELISELDQMFDFNGSLIDG-NSGFHI 667
           Q  +   +++  KV K G+ +GRS+D++RF  Y EL  EL +MF   G L D   SG+ +
Sbjct: 697 QINSSNQTKNFVKVYKSGS-VGRSLDISRFSSYHELREELGKMFAIEGLLEDPLRSGWQL 755

Query: 668 AYMDDEGDMMLVGDNPWQDFQCAVRRMFICPKEDI 702
            ++D E D++L+GD+PW+ F   V  + I   ED+
Sbjct: 756 VFVDKENDILLLGDDPWESFVNNVWYIKILSPEDV 790


>sp|Q8S983|ARFK_ORYSJ Auxin response factor 11 OS=Oryza sativa subsp. japonica GN=ARF11
           PE=2 SV=1
          Length = 955

 Score =  326 bits (836), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 178/368 (48%), Positives = 237/368 (64%), Gaps = 10/368 (2%)

Query: 38  GGKNELYNELWRACAGPLVYVPRVGDIVYYFLQGHMEQVEAYNSQDDKAELPIY-NLPPK 96
           G K  + +ELW ACAGPLV +P+ G +VYYF QGH EQV A   +   + +P Y NLP +
Sbjct: 31  GAKKVINSELWHACAGPLVCLPQRGSLVYYFPQGHSEQVAATTRKIPNSRIPNYPNLPSQ 90

Query: 97  ILCEVVYAQLKAEPGTDEVFAQITLLP-RPEIDEL---SLEVGNSPPLPPKLNVCSFSKK 152
           +LC+V    L A+  TDEV+AQ+TL P   E D     +L        P +     F K 
Sbjct: 91  LLCQVHNITLHADKDTDEVYAQMTLQPVNSETDVFPIPTLGAYTKSKHPTEY----FCKN 146

Query: 153 LTPSDTSTHGGFSVPKRHADECLPPLDMSKDPPLQELVAKDLHGLEWRFRHIYRGQPKRH 212
           LT SDTSTHGGFSVP+R A++  P LD S  PP QEL+ +DLH   W FRHIYRGQPKRH
Sbjct: 147 LTASDTSTHGGFSVPRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYRGQPKRH 206

Query: 213 LLTSGWSVFVTSKKLVAGDVCIFLRGGDGELRVGVRRAMKLQNNASTSVISSLSMQHGIL 272
           LLT+GWS+FV +K+L AGD  +F+R    +L +GVRRA + Q   S+SV+S+ SM  G+L
Sbjct: 207 LLTTGWSLFVGAKRLKAGDSVLFIRDEKSQLLLGVRRATRQQTMLSSSVLSTDSMHIGVL 266

Query: 273 AGAFHAISTGTRFTVYYHPWTRPAEFLVPFSQYMKSAEIDYSIGTRFRMVFEGEECADQR 332
           A A HA S+G+ FT+YY+P T P+ F++P ++Y K+  +  S+G RF M+FE EE + +R
Sbjct: 267 AAAAHAASSGSSFTIYYNPRTSPSPFVIPVARYNKATYMQPSVGMRFAMMFETEESSKRR 326

Query: 333 IAGTVVGTEDVDHIRWPASEWRCLKVKWDATTDSITRPARVSPWNIEPIERTHKRPASVQ 392
             GTVVG  D D +RWP S+WR L+V+WD       RP RVS W+IE  E T   P+S  
Sbjct: 327 YTGTVVGISDYDPMRWPNSKWRNLQVEWDEHGYG-ERPERVSIWDIETPENTLVFPSSTL 385

Query: 393 HQQKRLRP 400
           + +++  P
Sbjct: 386 NSKRQCLP 393



 Score = 66.2 bits (160), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 36/87 (41%), Positives = 54/87 (62%), Gaps = 2/87 (2%)

Query: 617 RSCTKVIKFGTALGRSVDLTRFHGYDELISELDQMFDFNGSLID-GNSGFHIAYMDDEGD 675
           R+ TKV K G ++GRS+D+T F  Y EL S +  MF   G L   G+S + + Y+D E D
Sbjct: 852 RTYTKVQKQG-SVGRSIDVTGFRNYHELRSAIACMFGLQGKLEHPGSSEWKLVYVDYEND 910

Query: 676 MMLVGDNPWQDFQCAVRRMFICPKEDI 702
           ++LVGD+PW++F   VR + I    ++
Sbjct: 911 VLLVGDDPWEEFINCVRCIRILSPSEV 937


>sp|Q01K26|ARFK_ORYSI Auxin response factor 11 OS=Oryza sativa subsp. indica GN=ARF11
           PE=2 SV=2
          Length = 955

 Score =  326 bits (836), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 178/368 (48%), Positives = 237/368 (64%), Gaps = 10/368 (2%)

Query: 38  GGKNELYNELWRACAGPLVYVPRVGDIVYYFLQGHMEQVEAYNSQDDKAELPIY-NLPPK 96
           G K  + +ELW ACAGPLV +P+ G +VYYF QGH EQV A   +   + +P Y NLP +
Sbjct: 31  GAKKVINSELWHACAGPLVCLPQRGSLVYYFPQGHSEQVAATTRKIPNSRIPNYPNLPSQ 90

Query: 97  ILCEVVYAQLKAEPGTDEVFAQITLLP-RPEIDEL---SLEVGNSPPLPPKLNVCSFSKK 152
           +LC+V    L A+  TDEV+AQ+TL P   E D     +L        P +     F K 
Sbjct: 91  LLCQVHNITLHADKDTDEVYAQMTLQPVNSETDVFPIPTLGAYTKSKHPTEY----FCKN 146

Query: 153 LTPSDTSTHGGFSVPKRHADECLPPLDMSKDPPLQELVAKDLHGLEWRFRHIYRGQPKRH 212
           LT SDTSTHGGFSVP+R A++  P LD S  PP QEL+ +DLH   W FRHIYRGQPKRH
Sbjct: 147 LTASDTSTHGGFSVPRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYRGQPKRH 206

Query: 213 LLTSGWSVFVTSKKLVAGDVCIFLRGGDGELRVGVRRAMKLQNNASTSVISSLSMQHGIL 272
           LLT+GWS+FV +K+L AGD  +F+R    +L +GVRRA + Q   S+SV+S+ SM  G+L
Sbjct: 207 LLTTGWSLFVGAKRLKAGDSVLFIRDEKSQLLLGVRRATRQQTMLSSSVLSTDSMHIGVL 266

Query: 273 AGAFHAISTGTRFTVYYHPWTRPAEFLVPFSQYMKSAEIDYSIGTRFRMVFEGEECADQR 332
           A A HA S+G+ FT+YY+P T P+ F++P ++Y K+  +  S+G RF M+FE EE + +R
Sbjct: 267 AAAAHAASSGSSFTIYYNPRTSPSPFVIPVARYNKATYMQPSVGMRFAMMFETEESSKRR 326

Query: 333 IAGTVVGTEDVDHIRWPASEWRCLKVKWDATTDSITRPARVSPWNIEPIERTHKRPASVQ 392
             GTVVG  D D +RWP S+WR L+V+WD       RP RVS W+IE  E T   P+S  
Sbjct: 327 YTGTVVGISDYDPMRWPNSKWRNLQVEWDEHGYG-ERPERVSIWDIETPENTLVFPSSTL 385

Query: 393 HQQKRLRP 400
           + +++  P
Sbjct: 386 NSKRQCLP 393



 Score = 66.2 bits (160), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 36/87 (41%), Positives = 54/87 (62%), Gaps = 2/87 (2%)

Query: 617 RSCTKVIKFGTALGRSVDLTRFHGYDELISELDQMFDFNGSLID-GNSGFHIAYMDDEGD 675
           R+ TKV K G ++GRS+D+T F  Y EL S +  MF   G L   G+S + + Y+D E D
Sbjct: 852 RTYTKVQKQG-SVGRSIDVTGFRNYHELRSAIACMFGLQGKLEHPGSSEWKLVYVDYEND 910

Query: 676 MMLVGDNPWQDFQCAVRRMFICPKEDI 702
           ++LVGD+PW++F   VR + I    ++
Sbjct: 911 VLLVGDDPWEEFINCVRCIRILSPSEV 937


>sp|P93022|ARFG_ARATH Auxin response factor 7 OS=Arabidopsis thaliana GN=ARF7 PE=1 SV=2
          Length = 1164

 Score =  325 bits (833), Expect = 8e-88,   Method: Compositional matrix adjust.
 Identities = 176/348 (50%), Positives = 232/348 (66%), Gaps = 9/348 (2%)

Query: 38  GGKNELYNELWRACAGPLVYVPRVGDIVYYFLQGHMEQVEAYNSQDDKAELPIY-NLPPK 96
           G +  + +ELW ACAGPL+ +P  G +V YF QGH EQV A + Q     +P Y NLP K
Sbjct: 16  GERRNINSELWHACAGPLISLPPAGSLVVYFPQGHSEQVAA-SMQKQTDFIPSYPNLPSK 74

Query: 97  ILCEVVYAQLKAEPGTDEVFAQITLLPRPEIDELSLEVGNSPPLPPKLNVCS---FSKKL 153
           ++C +    L A+P TDEV+AQ+TL P  + D  +L   +   +  KLN      F K L
Sbjct: 75  LICMLHNVTLNADPETDEVYAQMTLQPVNKYDRDALLASD---MGLKLNRQPNEFFCKTL 131

Query: 154 TPSDTSTHGGFSVPKRHADECLPPLDMSKDPPLQELVAKDLHGLEWRFRHIYRGQPKRHL 213
           T SDTSTHGGFSVP+R A++  P LD S  PP QELVAKD+H   W FRHIYRGQPKRHL
Sbjct: 132 TASDTSTHGGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFRHIYRGQPKRHL 191

Query: 214 LTSGWSVFVTSKKLVAGDVCIFLRGGDGELRVGVRRAMKLQNNASTSVISSLSMQHGILA 273
           LT+GWSVFV++K+L AGD  +F+R G  +L +G+RRA + Q   S+SVISS SM  G+LA
Sbjct: 192 LTTGWSVFVSTKRLFAGDSVLFIRDGKAQLLLGIRRANRQQPALSSSVISSDSMHIGVLA 251

Query: 274 GAFHAISTGTRFTVYYHPWTRPAEFLVPFSQYMKSAEIDYSIGTRFRMVFEGEECADQRI 333
            A HA +  + FT++Y+P   PAEF+VP ++Y K+     S+G RFRM+FE EEC  +R 
Sbjct: 252 AAAHANANNSPFTIFYNPRAAPAEFVVPLAKYTKAMYAQVSLGMRFRMIFETEECGVRRY 311

Query: 334 AGTVVGTEDVDHIRWPASEWRCLKVKWDATTDSITRPARVSPWNIEPI 381
            GTV G  D+D +RW  S+WR L++ WD +  +  RP+RVS W+IEP+
Sbjct: 312 MGTVTGISDLDPVRWKNSQWRNLQIGWDESA-AGDRPSRVSVWDIEPV 358



 Score = 72.8 bits (177), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 36/87 (41%), Positives = 56/87 (64%), Gaps = 2/87 (2%)

Query: 617  RSCTKVIKFGTALGRSVDLTRFHGYDELISELDQMFDFNGSLID-GNSGFHIAYMDDEGD 675
            R+ TKV K G+ +GRS+D+ R+ GYDEL  +L +MF   G L D   S + + Y+D E D
Sbjct: 1037 RTYTKVQKRGS-VGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDWKLVYVDHEND 1095

Query: 676  MMLVGDNPWQDFQCAVRRMFICPKEDI 702
            ++LVGD+PW++F   V+ + I    ++
Sbjct: 1096 ILLVGDDPWEEFVNCVQSIKILSSAEV 1122


>sp|Q8RYC8|ARFS_ARATH Auxin response factor 19 OS=Arabidopsis thaliana GN=ARF19 PE=1 SV=2
          Length = 1086

 Score =  322 bits (824), Expect = 8e-87,   Method: Compositional matrix adjust.
 Identities = 176/348 (50%), Positives = 230/348 (66%), Gaps = 9/348 (2%)

Query: 38  GGKNELYNELWRACAGPLVYVPRVGDIVYYFLQGHMEQVEAYNSQDDKAELPIY-NLPPK 96
           G K  + ++LW ACAGPLV +P VG +V YF QGH EQV A + Q     +P Y NLP K
Sbjct: 15  GEKKPINSQLWHACAGPLVSLPPVGSLVVYFPQGHSEQVAA-SMQKQTDFIPNYPNLPSK 73

Query: 97  ILCEVVYAQLKAEPGTDEVFAQITLLPRPEIDELSLEVGNSPPLPPKLN---VCSFSKKL 153
           ++C +    L A+  TDEV+AQ+TL P  + D  +L   +   +  KLN      F K L
Sbjct: 74  LICLLHSVTLHADTETDEVYAQMTLQPVNKYDREALLASD---MGLKLNRQPTEFFCKTL 130

Query: 154 TPSDTSTHGGFSVPKRHADECLPPLDMSKDPPLQELVAKDLHGLEWRFRHIYRGQPKRHL 213
           T SDTSTHGGFSVP+R A++  PPLD S  PP QE+VAKDLH   W FRHIYRGQPKRHL
Sbjct: 131 TASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVAKDLHDTTWTFRHIYRGQPKRHL 190

Query: 214 LTSGWSVFVTSKKLVAGDVCIFLRGGDGELRVGVRRAMKLQNNASTSVISSLSMQHGILA 273
           LT+GWSVFV++K+L AGD  +F+R    +L +G+RRA +     S+SVISS SM  GILA
Sbjct: 191 LTTGWSVFVSTKRLFAGDSVLFVRDEKSQLMLGIRRANRQTPTLSSSVISSDSMHIGILA 250

Query: 274 GAFHAISTGTRFTVYYHPWTRPAEFLVPFSQYMKSAEIDYSIGTRFRMVFEGEECADQRI 333
            A HA +  + FT++++P   P+EF+VP ++Y K+     S+G RFRM+FE E+C  +R 
Sbjct: 251 AAAHANANSSPFTIFFNPRASPSEFVVPLAKYNKALYAQVSLGMRFRMMFETEDCGVRRY 310

Query: 334 AGTVVGTEDVDHIRWPASEWRCLKVKWDATTDSITRPARVSPWNIEPI 381
            GTV G  D+D +RW  S+WR L+V WD +T    RP+RVS W IEP+
Sbjct: 311 MGTVTGISDLDPVRWKGSQWRNLQVGWDESTAG-DRPSRVSIWEIEPV 357



 Score = 73.6 bits (179), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 37/87 (42%), Positives = 56/87 (64%), Gaps = 2/87 (2%)

Query: 617  RSCTKVIKFGTALGRSVDLTRFHGYDELISELDQMFDFNGSLIDG-NSGFHIAYMDDEGD 675
            R+ TKV K G+ +GRS+D+TR+ GYDEL  +L +MF   G L D   S + + Y D E D
Sbjct: 958  RTYTKVQKRGS-VGRSIDVTRYSGYDELRHDLARMFGIEGQLEDPLTSDWKLVYTDHEND 1016

Query: 676  MMLVGDNPWQDFQCAVRRMFICPKEDI 702
            ++LVGD+PW++F   V+ + I    ++
Sbjct: 1017 ILLVGDDPWEEFVNCVQNIKILSSVEV 1043


>sp|P93024|ARFE_ARATH Auxin response factor 5 OS=Arabidopsis thaliana GN=ARF5 PE=1 SV=3
          Length = 902

 Score =  319 bits (817), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 173/377 (45%), Positives = 237/377 (62%), Gaps = 20/377 (5%)

Query: 36  EAGGKNELYN-ELWRACAGPLVYVPRVGDIVYYFLQGHMEQVEAYNSQDDKAELPIY-NL 93
           ++G +  + N ELW ACAGPLV +P+VG +VYYF QGH EQV     +    ++P Y NL
Sbjct: 43  QSGTRKPVINSELWHACAGPLVCLPQVGSLVYYFSQGHSEQVAVSTRRSATTQVPNYPNL 102

Query: 94  PPKILCEVVYAQLKAEPGTDEVFAQITLLP-RPEID-----ELSLEVGNSPPLPPKLNVC 147
           P +++C+V    L A+  +DE++AQ++L P   E D     +  +  G+  P        
Sbjct: 103 PSQLMCQVHNVTLHADKDSDEIYAQMSLQPVHSERDVFPVPDFGMLRGSKHPTE------ 156

Query: 148 SFSKKLTPSDTSTHGGFSVPKRHADECLPPLDMSKDPPLQELVAKDLHGLEWRFRHIYRG 207
            F K LT SDTSTHGGFSVP+R A++  PPLD S  PP QELV +DLH   W FRHIYRG
Sbjct: 157 FFCKTLTASDTSTHGGFSVPRRAAEKLFPPLDYSAQPPTQELVVRDLHENTWTFRHIYRG 216

Query: 208 QPKRHLLTSGWSVFVTSKKLVAGDVCIFLRGGDGELRVGVRRAMKLQNNASTSVISSLSM 267
           QPKRHLLT+GWS+FV SK+L AGD  +F+R    +L VGVRRA + Q    +SV+S+ SM
Sbjct: 217 QPKRHLLTTGWSLFVGSKRLRAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADSM 276

Query: 268 QHGILAGAFHAISTGTRFTVYYHPWTRPAEFLVPFSQYMKS-AEIDYSIGTRFRMVFEGE 326
             G+LA A HA +  T F ++Y+P   PAEF++P ++Y K+      S+G RF M+FE E
Sbjct: 277 HIGVLAAAAHATANRTPFLIFYNPRACPAEFVIPLAKYRKAICGSQLSVGMRFGMMFETE 336

Query: 327 ECADQRIAGTVVGTEDVDHIRWPASEWRCLKVKWD--ATTDSITRPARVSPWNIEPIERT 384
           +   +R  GT+VG  D+D +RWP S+WR L+V+WD     D   +P RVSPW+IE  E  
Sbjct: 337 DSGKRRYMGTIVGISDLDPLRWPGSKWRNLQVEWDEPGCND---KPTRVSPWDIETPESL 393

Query: 385 HKRPASVQHQQKRLRPN 401
              P+     +++L P+
Sbjct: 394 FIFPSLTSGLKRQLHPS 410



 Score = 68.6 bits (166), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 36/81 (44%), Positives = 54/81 (66%), Gaps = 2/81 (2%)

Query: 617 RSCTKVIKFGTALGRSVDLTRFHGYDELISELDQMFDFNGSLID-GNSGFHIAYMDDEGD 675
           R+ TKV K G ++GRS+D+T F  Y+EL S ++ MF   G L    +SG+ + Y+D E D
Sbjct: 793 RTYTKVQKTG-SVGRSIDVTSFKDYEELKSAIECMFGLEGLLTHPQSSGWKLVYVDYESD 851

Query: 676 MMLVGDNPWQDFQCAVRRMFI 696
           ++LVGD+PW++F   VR + I
Sbjct: 852 VLLVGDDPWEEFVGCVRCIRI 872


>sp|A3B9A0|ARFP_ORYSJ Auxin response factor 16 OS=Oryza sativa subsp. japonica GN=ARF16
           PE=2 SV=1
          Length = 1055

 Score =  318 bits (816), Expect = 7e-86,   Method: Compositional matrix adjust.
 Identities = 172/348 (49%), Positives = 232/348 (66%), Gaps = 9/348 (2%)

Query: 38  GGKNELYNELWRACAGPLVYVPRVGDIVYYFLQGHMEQVEAYNSQDDKAELPIY-NLPPK 96
           G K  + +ELW ACAGPLV +P VG +V YF QGH EQV A +   +   +P Y +LP K
Sbjct: 16  GEKKAINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAA-SMHKELDNIPGYPSLPSK 74

Query: 97  ILCEVVYAQLKAEPGTDEVFAQITLLPRPEIDE---LSLEVGNSPPLPPKLNVCSFSKKL 153
           ++C+++   L A+  TDEV+AQ+TL P  + D    L+ E+G      P    C   K L
Sbjct: 75  LICKLLSLTLHADSETDEVYAQMTLQPVNKYDRDAMLASELGLKQNKQPAEFFC---KTL 131

Query: 154 TPSDTSTHGGFSVPKRHADECLPPLDMSKDPPLQELVAKDLHGLEWRFRHIYRGQPKRHL 213
           T SDTSTHGGFSVP+R A++  PPLD +  PP QEL+AKDLH + W+FRHIYRGQPKRHL
Sbjct: 132 TASDTSTHGGFSVPRRAAEKIFPPLDFTMQPPAQELIAKDLHDISWKFRHIYRGQPKRHL 191

Query: 214 LTSGWSVFVTSKKLVAGDVCIFLRGGDGELRVGVRRAMKLQNNASTSVISSLSMQHGILA 273
           LT+GWSVFV++K+L+AGD  +F+R    +L +G+RRA + Q   S+SV+SS SM  GILA
Sbjct: 192 LTTGWSVFVSTKRLLAGDSVLFIRDEKSQLLLGIRRATRPQPALSSSVLSSDSMHIGILA 251

Query: 274 GAFHAISTGTRFTVYYHPWTRPAEFLVPFSQYMKSAEIDYSIGTRFRMVFEGEECADQRI 333
            A HA +  + FT++Y+P   P+EF++P ++Y K+     S+G RFRM+FE E+   +R 
Sbjct: 252 AAAHAAANSSPFTIFYNPRASPSEFVIPLAKYNKALYTQVSLGMRFRMLFETEDSGVRRY 311

Query: 334 AGTVVGTEDVDHIRWPASEWRCLKVKWDATTDSITRPARVSPWNIEPI 381
            GT+ G  D+D +RW  S WR L+V WD +T S  R  RVS W IEP+
Sbjct: 312 MGTITGIGDLDPVRWKNSHWRNLQVGWDESTAS-ERRTRVSIWEIEPV 358



 Score = 68.9 bits (167), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 35/87 (40%), Positives = 54/87 (62%), Gaps = 2/87 (2%)

Query: 617  RSCTKVIKFGTALGRSVDLTRFHGYDELISELDQMFDFNGSLID-GNSGFHIAYMDDEGD 675
            R+ TKV K G+ +GRS+D+TR+  YDEL  +L  MF   G L D     + + Y+D E D
Sbjct: 940  RTFTKVQKRGS-VGRSIDITRYRDYDELRHDLACMFGIQGQLEDPYRMDWKLVYVDHEND 998

Query: 676  MMLVGDNPWQDFQCAVRRMFICPKEDI 702
            ++LVGD+PW++F   V+ + I    ++
Sbjct: 999  ILLVGDDPWEEFVGCVKSIKILSAAEV 1025


>sp|Q0D9R7|ARFS_ORYSJ Auxin response factor 19 OS=Oryza sativa subsp. japonica GN=ARF19
           PE=2 SV=2
          Length = 1161

 Score =  317 bits (813), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 175/376 (46%), Positives = 230/376 (61%), Gaps = 3/376 (0%)

Query: 43  LYNELWRACAGPLVYVPRVGDIVYYFLQGHMEQVEAYNSQDDKAELPIY-NLPPKILCEV 101
           + +ELW ACAGPLV +P  G +V YF QGH EQV A   +D  A +P Y NLP K++C +
Sbjct: 47  INSELWHACAGPLVSLPPAGSLVVYFPQGHSEQVAASMQKDVDAHVPSYPNLPSKLICLL 106

Query: 102 VYAQLKAEPGTDEVFAQITLLPRPEIDELSLEVGNSPPLPPKLNVCSFSKKLTPSDTSTH 161
               L A+P TDEV+AQ+TL P     + +L++        +     F K LT SDTSTH
Sbjct: 107 HNVTLHADPETDEVYAQMTLQPVTSYGKEALQLSELALKQARPQTEFFCKTLTASDTSTH 166

Query: 162 GGFSVPKRHADECLPPLDMSKDPPLQELVAKDLHGLEWRFRHIYRGQPKRHLLTSGWSVF 221
           GGFSVP+R A++  PPLD S  PP QEL A+DLH   W FRHIYRGQPKRHLLT+GWS+F
Sbjct: 167 GGFSVPRRAAEKIFPPLDFSMQPPAQELQARDLHDNVWTFRHIYRGQPKRHLLTTGWSLF 226

Query: 222 VTSKKLVAGDVCIFLRGGDGELRVGVRRAMKLQNNASTSVISSLSMQHGILAGAFHAIST 281
           V+ K+L AGD  IF+R    +L +G+RRA +   N S+SV+SS SM  GILA A HA + 
Sbjct: 227 VSGKRLFAGDSVIFVRDEKQQLLLGIRRANRQPTNISSSVLSSDSMHIGILAAAAHAAAN 286

Query: 282 GTRFTVYYHPWTRPAEFLVPFSQYMKSAEID-YSIGTRFRMVFEGEECADQRIAGTVVGT 340
            + FT++Y+P   P EF++PF++Y K+   +  S+G RFRM+FE EE   +R  GT+ G 
Sbjct: 287 NSPFTIFYNPRASPTEFVIPFAKYQKAVYGNQISLGMRFRMMFETEELGTRRYMGTITGI 346

Query: 341 EDVDHIRWPASEWRCLKVKWDATTDSITRPARVSPWNIEPIERTHKRPASVQHQQKRLRP 400
            D+D +RW  S+WR L+V WD +     R  RVS W IEP+              KR R 
Sbjct: 347 SDLDPVRWKNSQWRNLQVGWDESAAG-ERRNRVSIWEIEPVAAPFFICPPPFFGAKRPRQ 405

Query: 401 NDASSPWFSSLFSNGV 416
            D  S    +L    +
Sbjct: 406 LDDESSEMENLLKRAM 421



 Score = 72.4 bits (176), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 35/87 (40%), Positives = 56/87 (64%), Gaps = 2/87 (2%)

Query: 617  RSCTKVIKFGTALGRSVDLTRFHGYDELISELDQMFDFNGSLIDGNS-GFHIAYMDDEGD 675
            R+ TKV K G A+GRS+D+++F GYDEL   L +MF   G L +    G+ + Y D E D
Sbjct: 1027 RTFTKVYKRG-AVGRSIDMSQFSGYDELKHALARMFSIEGQLEERQRIGWKLVYKDHEDD 1085

Query: 676  MMLVGDNPWQDFQCAVRRMFICPKEDI 702
            ++L+GD+PW++F   V+ + I   +++
Sbjct: 1086 ILLLGDDPWEEFVGCVKCIRILSPQEV 1112


>sp|A2YAA5|ARFP_ORYSI Auxin response factor 16 OS=Oryza sativa subsp. indica GN=ARF16
           PE=2 SV=1
          Length = 1055

 Score =  317 bits (811), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 171/348 (49%), Positives = 231/348 (66%), Gaps = 9/348 (2%)

Query: 38  GGKNELYNELWRACAGPLVYVPRVGDIVYYFLQGHMEQVEAYNSQDDKAELPIY-NLPPK 96
           G K  + +ELW ACAGPLV +P VG +V YF QGH EQV A +   +   +P Y +LP K
Sbjct: 16  GEKKAINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAA-SMHKELDNIPGYPSLPSK 74

Query: 97  ILCEVVYAQLKAEPGTDEVFAQITLLPRPEIDE---LSLEVGNSPPLPPKLNVCSFSKKL 153
           ++C+++   L A+  TDEV+ Q+TL P  + D    L+ E+G      P    C   K L
Sbjct: 75  LICKLLSLTLHADSETDEVYVQMTLQPVNKYDRDAMLASELGLKQNKQPAEFFC---KTL 131

Query: 154 TPSDTSTHGGFSVPKRHADECLPPLDMSKDPPLQELVAKDLHGLEWRFRHIYRGQPKRHL 213
           T SDTSTHGGFSVP+R A++  PPLD +  PP QEL+AKDLH + W+FRHIYRGQPKRHL
Sbjct: 132 TASDTSTHGGFSVPRRAAEKIFPPLDFTMQPPAQELIAKDLHDISWKFRHIYRGQPKRHL 191

Query: 214 LTSGWSVFVTSKKLVAGDVCIFLRGGDGELRVGVRRAMKLQNNASTSVISSLSMQHGILA 273
           LT+GWSVFV++K+L+AGD  +F+R    +L +G+RRA + Q   S+SV+SS SM  GILA
Sbjct: 192 LTTGWSVFVSTKRLLAGDSVLFIRDEKSQLLLGIRRATRPQPALSSSVLSSDSMHIGILA 251

Query: 274 GAFHAISTGTRFTVYYHPWTRPAEFLVPFSQYMKSAEIDYSIGTRFRMVFEGEECADQRI 333
            A HA +  + FT++Y+P   P+EF++P ++Y K+     S+G RFRM+FE E+   +R 
Sbjct: 252 AAAHAAANSSPFTIFYNPRASPSEFVIPLAKYNKALYTQVSLGMRFRMLFETEDSGVRRY 311

Query: 334 AGTVVGTEDVDHIRWPASEWRCLKVKWDATTDSITRPARVSPWNIEPI 381
            GT+ G  D+D +RW  S WR L+V WD +T S  R  RVS W IEP+
Sbjct: 312 MGTITGIGDLDPVRWKNSHWRNLQVGWDESTAS-ERRTRVSIWEIEPV 358



 Score = 68.9 bits (167), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 35/87 (40%), Positives = 54/87 (62%), Gaps = 2/87 (2%)

Query: 617  RSCTKVIKFGTALGRSVDLTRFHGYDELISELDQMFDFNGSLID-GNSGFHIAYMDDEGD 675
            R+ TKV K G+ +GRS+D+TR+  YDEL  +L  MF   G L D     + + Y+D E D
Sbjct: 940  RTFTKVQKRGS-VGRSIDITRYRDYDELRHDLACMFGIQGQLEDPYRMDWKLVYVDHEND 998

Query: 676  MMLVGDNPWQDFQCAVRRMFICPKEDI 702
            ++LVGD+PW++F   V+ + I    ++
Sbjct: 999  ILLVGDDPWEEFVGCVKSIKILSAAEV 1025


>sp|Q8S985|ARFO_ORYSJ Auxin response factor 15 OS=Oryza sativa subsp. japonica GN=ARF15
           PE=2 SV=1
          Length = 712

 Score =  314 bits (805), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 167/372 (44%), Positives = 225/372 (60%), Gaps = 15/372 (4%)

Query: 34  PAEAGGKNELYNELWRACAGPLVYVPRVGDIVYYFLQGHMEQVEAYNSQDDKAELPIYNL 93
           PA AG    +  ELW ACAGP+  +PR G +V Y  QGH+E +    +    A     + 
Sbjct: 29  PARAGA---VCLELWHACAGPVAPLPRKGGVVVYLPQGHLEHLGDAPAAAAAAAAVPPH- 84

Query: 94  PPKILCEVVYAQLKAEPGTDEVFAQITLLP-RPEIDELSLEVGNSPPLPPKLNVCS---- 148
              + C VV   L A+  TDEV+AQ++L+P + E+   + +         K         
Sbjct: 85  ---VFCRVVDVTLLADAATDEVYAQLSLVPEKEEVARRADDGEGEDGDGMKQRFARMPHM 141

Query: 149 FSKKLTPSDTSTHGGFSVPKRHADECLPPLDMSKDPPLQELVAKDLHGLEWRFRHIYRGQ 208
           F K LT SDTSTHGGFSVP+R A++C PPLD S+  P QELVAKDLH  EWRFRHIYRGQ
Sbjct: 142 FCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHSTEWRFRHIYRGQ 201

Query: 209 PKRHLLTSGWSVFVTSKKLVAGDVCIFLRGGDGELRVGVRRAMKLQNNASTSVISSLSMQ 268
           P+RHLLT+GWS FV  KKLV+GD  +FLRG DGELR+GVRRA +L+N ++   + +    
Sbjct: 202 PRRHLLTTGWSAFVNKKKLVSGDAVLFLRGDDGELRLGVRRAAQLKNGSAFPALYNQCSN 261

Query: 269 HGILAGAFHAISTGTRFTVYYHPWTRPAEFLVPFSQYMKSAEIDYSIGTRFRMVFEGEEC 328
            G LA   HA++T + F +YY+P    +EF+VP+ ++MKS    +S+G RF+M +E E+ 
Sbjct: 262 LGTLANVAHAVATESVFNIYYNPRLSQSEFIVPYWKFMKSLSQPFSVGLRFKMRYESEDA 321

Query: 329 ADQRIAGTVVGTEDVDHIRWPASEWRCLKVKWDATTDSITRPARVSPWNIEPIERTHKRP 388
            ++R  G + G+ D D + W  S+W+CL V+WD   +   RP RVSPW IE         
Sbjct: 322 TERRYTGIITGSGDTDPM-WHGSKWKCLLVRWDDDAE-FRRPNRVSPWEIELTSSVSGSH 379

Query: 389 ASVQHQQKRLRP 400
            S  H  KRL+P
Sbjct: 380 LSTPH-SKRLKP 390


>sp|Q6Z2W3|ARFE_ORYSJ Auxin response factor 5 OS=Oryza sativa subsp. japonica GN=ARF5
           PE=2 SV=2
          Length = 1142

 Score =  314 bits (804), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 167/341 (48%), Positives = 223/341 (65%), Gaps = 3/341 (0%)

Query: 43  LYNELWRACAGPLVYVPRVGDIVYYFLQGHMEQVEAYNSQDDKAELPIY-NLPPKILCEV 101
           + +ELW ACAGPLV +P VG +V YF QGH EQV A   +D  A +P Y NLP K++C +
Sbjct: 41  INSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKDVDAHVPSYPNLPSKLICLL 100

Query: 102 VYAQLKAEPGTDEVFAQITLLPRPEIDELSLEVGNSPPLPPKLNVCSFSKKLTPSDTSTH 161
               L A+P TDEV+AQ+TL P     + +L++        +  +  F K LT SDTSTH
Sbjct: 101 HGVNLHADPDTDEVYAQMTLQPVNTYGKEALQISELALKQARPQMEFFCKTLTASDTSTH 160

Query: 162 GGFSVPKRHADECLPPLDMSKDPPLQELVAKDLHGLEWRFRHIYRGQPKRHLLTSGWSVF 221
           GGFSVP+R A++  PPLD S  PP QEL A+D+H   W FRHIYRGQPKRHLLT+GWS+F
Sbjct: 161 GGFSVPRRAAEKIFPPLDFSMQPPAQELQARDIHDNVWTFRHIYRGQPKRHLLTTGWSLF 220

Query: 222 VTSKKLVAGDVCIFLRGGDGELRVGVRRAMKLQNNASTSVISSLSMQHGILAGAFHAIST 281
           V+ K+L AGD  I +R    +L +G+RRA +   N S+SV+SS SM  G+LA A HA + 
Sbjct: 221 VSGKRLFAGDSVIVVRDEKHQLLLGIRRANRQPTNISSSVLSSDSMHIGVLAAAAHAAAN 280

Query: 282 GTRFTVYYHPWTRPAEFLVPFSQYMKSAEID-YSIGTRFRMVFEGEECADQRIAGTVVGT 340
            + FT++Y+P   P EF++PF++Y K+   +  S+G RFRM+FE EE   +R  GT+ G 
Sbjct: 281 SSPFTIFYNPRASPTEFVIPFAKYQKALYSNQISLGMRFRMMFETEELGTRRYMGTITGI 340

Query: 341 EDVDHIRWPASEWRCLKVKWDATTDSITRPARVSPWNIEPI 381
            D+D +RW  S+WR L+V WD +     R  RVS W IEP+
Sbjct: 341 SDLDPVRWKNSQWRNLQVGWDESAAG-ERRNRVSIWEIEPV 380



 Score = 72.0 bits (175), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 36/87 (41%), Positives = 55/87 (63%), Gaps = 2/87 (2%)

Query: 617  RSCTKVIKFGTALGRSVDLTRFHGYDELISELDQMFDFNGSLIDGNS-GFHIAYMDDEGD 675
            R+ TKV K G A+GRS+D+ R+ GY+EL   L +MF   G L D    G+ + Y D E D
Sbjct: 1009 RTFTKVYKRG-AVGRSIDIGRYSGYEELKHALARMFGIEGQLEDRQRIGWKLVYKDHEDD 1067

Query: 676  MMLVGDNPWQDFQCAVRRMFICPKEDI 702
            ++L+GD+PW++F   VR + I   +++
Sbjct: 1068 ILLLGDDPWEEFVNCVRCIRILSPQEV 1094


>sp|Q0JKI9|ARFB_ORYSJ Auxin response factor 2 OS=Oryza sativa subsp. japonica GN=ARF2
           PE=2 SV=1
          Length = 718

 Score =  311 bits (797), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 176/422 (41%), Positives = 238/422 (56%), Gaps = 39/422 (9%)

Query: 27  ALPTKHKPAEAGGKNELYNELWRACAGPLVYVPRVGDIVYYFLQGHMEQVEAYNSQDDKA 86
           A  T   PAEA     +  ELW ACAGP+  +PR G  V Y  QGH+E + A        
Sbjct: 20  ATGTVTAPAEARAGGAVCLELWHACAGPVAPLPRKGSAVVYLPQGHLEHLGAAPGSG--- 76

Query: 87  ELPIYNLPPKILCEVVYAQLKAEPGTDEVFAQITLLPRPEIDELSLEVGNS--------- 137
             P   +PP + C VV   L A+  TDEV+AQ++L+   E  E  +  G           
Sbjct: 77  --PGAAVPPHVFCRVVDVSLHADAATDEVYAQVSLVADNEEVERRMREGEDGAACDGEGE 134

Query: 138 -----PPLPPKLNVCSFSKKLTPSDTSTHGGFSVPKRHADECLPPLDMSKDPPLQELVAK 192
                P   P +    F K LT SDTSTHGGFSVP+R A++C PPLD S   P QELVAK
Sbjct: 135 DAVKRPARIPHM----FCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSLQRPFQELVAK 190

Query: 193 DLHGLEWRFRHIYRGQPKRHLLTSGWSVFVTSKKLVAGDVCIFLRGGDGELRVGVRRAMK 252
           DLHG EWRFRHIYRGQP+RHLLT+GWS F+  KKLV+GD  +FLRG DGELR+GVRRA +
Sbjct: 191 DLHGTEWRFRHIYRGQPRRHLLTTGWSGFINKKKLVSGDAVLFLRGEDGELRLGVRRAAQ 250

Query: 253 LQNNASTSVISSLSMQHGILAGAFHAISTGTRFTVYYHPWTRPAEFLVPFSQYMKSAEID 312
           L+N +    + +       L+   HA++  + F +YY+P    +EF++P+ ++M+S    
Sbjct: 251 LKNASPFPALHNQISNTSSLSEVAHAVAVKSIFHIYYNPRLSQSEFIIPYWKFMRSFSQP 310

Query: 313 YSIGTRFRMVFEGEECADQRIAGTVVGTEDVDHIRWPASEWRCLKVKWDATTDSITRPAR 372
           +S+G RF++ +E E+ +++R  G ++G+ + D + W  S+W+CL VKWD   +   RP  
Sbjct: 311 FSVGMRFKLRYESEDASERRRTGIIIGSREADPM-WHGSKWKCLVVKWDDDVE-CRRPNG 368

Query: 373 VSPWNIEPIERTHKRPASVQHQQKRLR------------PNDA-SSPWFSSLFSNGVFQG 419
           VSPW IE          S  H  KRL+            PN + SS +  S   + V QG
Sbjct: 369 VSPWEIELSGSVSGSHLSTPH-SKRLKSCFPQVNPDIVLPNGSVSSDFAESARFHKVLQG 427

Query: 420 QE 421
           QE
Sbjct: 428 QE 429


>sp|Q6YZW0|ARFU_ORYSJ Auxin response factor 21 OS=Oryza sativa subsp. japonica GN=ARF21
           PE=2 SV=2
          Length = 1116

 Score =  308 bits (789), Expect = 9e-83,   Method: Compositional matrix adjust.
 Identities = 166/345 (48%), Positives = 222/345 (64%), Gaps = 6/345 (1%)

Query: 42  ELYNELWRACAGPLVYVPRVGDIVYYFLQGHMEQVEAYNSQDDKAELPIY-NLPPKILCE 100
           ++  ELW ACAGPLV +P  G ++ YF QGH EQV A   +D  A++P Y NLP K++C 
Sbjct: 21  KVNQELWYACAGPLVSLPPQGSLIVYFPQGHSEQVAASMRKDADAQIPSYPNLPSKLICI 80

Query: 101 VVYAQLKAEPGTDEVFAQITLLPRPEIDELSLEVGNSPPLPPKLN---VCSFSKKLTPSD 157
           +    + A+P TDEV+A++TL P   + +   E   +  L  K        F K LT SD
Sbjct: 81  LHSVTMLADPDTDEVYARMTLQPVSNVTQCDKETLLASELALKQTRPQTEFFCKTLTASD 140

Query: 158 TSTHGGFSVPKRHADECLPPLDMSKDPPLQELVAKDLHGLEWRFRHIYRGQPKRHLLTSG 217
           TSTHGGFSVP+R A+   P LD S  PP QEL A+DLH   W FRHIYRGQPKRHLLT+G
Sbjct: 141 TSTHGGFSVPRRAAERIFPRLDFSMQPPAQELQARDLHDNVWTFRHIYRGQPKRHLLTTG 200

Query: 218 WSVFVTSKKLVAGDVCIFLRGGDGELRVGVRRAMKLQNNASTSVISSLSMQHGILAGAFH 277
           WS+FV+ K+L+AGD  +F+R    +L +G+RRA +   N S+SV+SS SM  GILA A H
Sbjct: 201 WSLFVSGKRLLAGDSVLFIRDAKQQLLLGIRRANRQPTNLSSSVLSSDSMHIGILAAAAH 260

Query: 278 AISTGTRFTVYYHPWTRPAEFLVPFSQYMKSAEID-YSIGTRFRMVFEGEECADQRIAGT 336
           A +  ++FT+YY+P    +EF++PF++Y K+   +  S+G RFRM+FE EE   +R  GT
Sbjct: 261 AAANNSQFTIYYNPRASTSEFVIPFAKYQKAVYGNQLSLGMRFRMMFETEESGTRRYMGT 320

Query: 337 VVGTEDVDHIRWPASEWRCLKVKWDATTDSITRPARVSPWNIEPI 381
           + G  D+D +RW  S WR ++V WD    +  R  RVS W IEPI
Sbjct: 321 ITGISDLDPVRWKTSHWRNIQVAWDEAAPT-ERRTRVSLWEIEPI 364



 Score = 79.0 bits (193), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 46/119 (38%), Positives = 74/119 (62%), Gaps = 10/119 (8%)

Query: 586  SSISETIQVSEPSKSVSGILSEKQCKNCYVSRSCTKVIKFGTALGRSVDLTRFHGYDELI 645
            S+I++T  ++  S+S +G   ++        R+ TKV K G A+GRS+D+ R+ GYDEL 
Sbjct: 974  SAINDTPFLNRNSRSAAGPAHQRM-------RTYTKVHKRG-AVGRSIDINRYSGYDELK 1025

Query: 646  SELDQMFDFNGSLIDGNS-GFHIAYMDDEGDMMLVGDNPWQDFQCAVRRM-FICPKEDI 702
             ++ +MF   G L D N  G+ + Y D E D++LVGD+PW+DF   VR +  + P+E++
Sbjct: 1026 HDVARMFGIEGQLGDQNRVGWKLVYEDHEKDVLLVGDDPWEDFVKCVRCIRILSPQEEM 1084


>sp|Q9FX25|ARFM_ARATH Auxin response factor 13 OS=Arabidopsis thaliana GN=ARF13 PE=2 SV=3
          Length = 621

 Score =  305 bits (782), Expect = 6e-82,   Method: Compositional matrix adjust.
 Identities = 154/344 (44%), Positives = 220/344 (63%), Gaps = 14/344 (4%)

Query: 40  KNELYNELWRACAGPLVYVPRVGDIVYYFLQGHMEQVEAYNSQDDKAE--LPIYNLPPKI 97
           K  +Y +LW  CAGPL  +P+ G+ VYYF QGH+E +E  NS  D+ +   PI++LP K+
Sbjct: 19  KTYMYEKLWNICAGPLCVLPKPGEKVYYFPQGHIELIE--NSTRDELDHIRPIFDLPSKL 76

Query: 98  LCEVVYAQLKAEPGTDEVFAQITLLPRPEIDELSLEVGNSPPLPPKLNVCSFSKKLTPSD 157
            C VV    K +  TDEV+AQI+L+P    D   +   N+     +  V  FSK LT SD
Sbjct: 77  RCRVVAIDRKVDKNTDEVYAQISLMP----DTTEVMTHNTTMDTRRPIVYFFSKILTASD 132

Query: 158 TSTHGGFSVPKRHADECLPPLDMSKDPPLQELVAKDLHGLEWRFRHIYRGQPKRHLLTS- 216
            S  GG  +PK++A EC PPLDMS+    Q LVAKDL+G EW F+H++RG P+RH+ TS 
Sbjct: 133 VSLSGGLIIPKQYAIECFPPLDMSQPISTQNLVAKDLYGQEWSFKHVFRGTPQRHMFTSG 192

Query: 217 -GWSVFVTSKKLVAGDVCIFLRGGDGELRVGVRRAMKLQNNASTSVISSLSMQHGILAGA 275
            GWSVF T+K+L+ GD+ + LRG +GELR G+RRA   Q +  +SVIS+  MQHG++A  
Sbjct: 193 GGWSVFATTKRLIVGDIFVLLRGENGELRFGIRRAKHQQGHIPSSVISANCMQHGVIASV 252

Query: 276 FHAISTGTRFTVYYHPWTRPAEFLVPFSQYMKSAEIDYSIGTRFRMVFEGEECADQRIAG 335
            +A  T   F V Y P    ++F++ + +++ +   +Y +G+RFRM FEG++ +++R  G
Sbjct: 253 VNAFKTKCMFNVVYKP--SSSQFVISYDKFVDAMNNNYIVGSRFRMQFEGKDFSEKRYDG 310

Query: 336 TVVGTEDVDHIRWPASEWRCLKVKWDATTDSITRPARVSPWNIE 379
           T++G  D+    W  SEWR LKV+WD  +    RP +VSPW+IE
Sbjct: 311 TIIGVNDMSP-HWKDSEWRSLKVQWDELS-PFLRPNQVSPWDIE 352



 Score = 82.0 bits (201), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 41/96 (42%), Positives = 59/96 (61%), Gaps = 1/96 (1%)

Query: 607 EKQCKNCYVSRSCTKVIKFGTALGRSVDLTRFHGYDELISELDQMFDFNGSLIDGNSGFH 666
           E Q      +RS  KV   G A+ R+VDLT  HGY++LI +L+++FD    L   N  + 
Sbjct: 498 EVQSTEFNFTRSRIKVHMQGVAISRAVDLTAMHGYNQLIQKLEELFDLKDELRTRNQ-WE 556

Query: 667 IAYMDDEGDMMLVGDNPWQDFQCAVRRMFICPKEDI 702
           I + ++EG  MLVGD+PW +F    +R+FIC KE+I
Sbjct: 557 IVFTNNEGAEMLVGDDPWPEFCNMAKRIFICSKEEI 592


>sp|Q5JMM1|ARFC_ORYSJ Auxin response factor 3 OS=Oryza sativa subsp. japonica GN=ARF3
           PE=2 SV=1
          Length = 731

 Score =  302 bits (774), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 172/401 (42%), Positives = 230/401 (57%), Gaps = 33/401 (8%)

Query: 46  ELWRACAGPLVYVPRVGDIVYYFLQGHMEQVEAYNSQDDKAELPIYNLPPKILCEVVYAQ 105
           +LW ACAGP+V +PR G  V Y  QGH+    A      + E+ +  LPP + C VV  +
Sbjct: 82  DLWHACAGPVVSLPRRGSAVVYLPQGHLSAAGAGGGI--RGEVAV-ALPPHVACRVVDVE 138

Query: 106 LKAEPGTDEVFAQITLLPRPEIDELSLEVGN---------SPPLPPKLNVCSFSKKLTPS 156
           L A+  TDEV+A++ L    E+ E +L  G                   +  F K LT S
Sbjct: 139 LCADAATDEVYARLALRAEGEVFERNLHGGGIEREDDMEDGDEERKSRMLHMFCKTLTAS 198

Query: 157 DTSTHGGFSVPKRHADECLPPLDMSKDPPLQELVAKDLHGLEWRFRHIYRGQPKRHLLTS 216
           DTSTHGGFSVP+R A++C PPLD  +  P QELVAKDLHG +WRFRHIYRGQP+RHLLT+
Sbjct: 199 DTSTHGGFSVPRRAAEDCFPPLDHKQLRPSQELVAKDLHGAKWRFRHIYRGQPRRHLLTT 258

Query: 217 GWSVFVTSKKLVAGDVCIFLRGGDGELRVGVRRAMKLQNNASTSVISSLSMQHGILAGAF 276
           GWS FV  KKLV+GD  +FLRG DGELR+GVRRA +L+N A     SS S +   L+   
Sbjct: 259 GWSSFVNKKKLVSGDAVLFLRGDDGELRLGVRRATQLKNEAIFKAFSSESSKMRTLSAVA 318

Query: 277 HAISTGTRFTVYYHPWTRPAEFLVPFSQYMKSAEIDYSIGTRFRMVFEGEECADQRIAGT 336
            ++  G+ F + Y+P    +E++VP+ +++KS      IG RF+  FE E+  ++R +G 
Sbjct: 319 DSLKHGSVFHICYNPRATASEYVVPYWKFVKSFNHPVCIGMRFKFHFESED-VNERRSGM 377

Query: 337 VVGTEDVDHIRWPASEWRCLKVKWDATTDSITRPARVSPWNIE----PIERTHKRPASVQ 392
           + G  +VD IRWP S+WR L V+W+  TD  ++  RVSPW IE     I   H   AS  
Sbjct: 378 IAGVSEVDPIRWPGSKWRSLLVRWEDATDCNSQ-NRVSPWEIEIVGGSISVAHSLSASSS 436

Query: 393 HQQKRLRPNDASSPWFSSLFSNG------------VFQGQE 421
            + K     +   P   +L+ NG            V QGQE
Sbjct: 437 KRTKLCPQGNLDVP---ALYGNGRPDSVETEKFPRVLQGQE 474


>sp|Q0DGS1|ARFN_ORYSJ Auxin response factor 14 OS=Oryza sativa subsp. japonica GN=ARF14
           PE=2 SV=2
          Length = 687

 Score =  297 bits (761), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 169/427 (39%), Positives = 242/427 (56%), Gaps = 34/427 (7%)

Query: 46  ELWRACAGPLVYVPRVGDIVYYFLQGHMEQVEAYNSQDDKAELPIYNLPPKILCEVVYAQ 105
           ELW ACAGP V +PR G  + Y  Q H+    A     +        +PP + C VV  +
Sbjct: 23  ELWHACAGPGVALPRRGSALVYLPQAHLA---ADGGGGEVPPAGAAAVPPHVACRVVGVE 79

Query: 106 LKAEPGTDEVFAQITLLPRPEIDELSLEVGNSPPLPPKLNVCS----------FSKKLTP 155
           L+A+  TDEV+A++ L+   E+ + +   G       ++  C           F K LT 
Sbjct: 80  LRADAATDEVYARLALVAEGEMLQRNFREGGGEDGAGEMEGCDAEKKPRMPHMFCKTLTA 139

Query: 156 SDTSTHGGFSVPKRHADECLPPLDMSKDPPLQELVAKDLHGLEWRFRHIYRGQPKRHLLT 215
           SDTSTHGGFSVP+R A++C PPLD     P QEL+A DLHG +W+FRHIYRGQP+RHLLT
Sbjct: 140 SDTSTHGGFSVPRRAAEDCFPPLDYKTVRPSQELIAVDLHGTQWKFRHIYRGQPRRHLLT 199

Query: 216 SGWSVFVTSKKLVAGDVCIFLRGGDGELRVGVRRAMKLQNNASTSVISSLSMQHGILAGA 275
            GWS FV  KKLV+GD  +FLRG DG+LR+GVRRA++L+N A    ++S   +  IL+  
Sbjct: 200 IGWSSFVNRKKLVSGDAVLFLRGDDGQLRLGVRRAVQLRNEALFEPVNSSDSKLRILSSV 259

Query: 276 FHAISTGTRFTVYYHPWTRPAEFLVPFSQYMKSAEIDYSIGTRFRMVFEGEECADQRIAG 335
             ++   + F + ++P +  +EF+VP+ + +KS    +SIG RFR+ +E E+ A++R AG
Sbjct: 260 ASSLENKSVFHICFNPRSGASEFIVPYWRLLKSLNHPFSIGMRFRVCYESED-ANERSAG 318

Query: 336 TVVGTEDVDHIRWPASEWRCLKVKWDATTDSITRPARVSPWNIE----PIERTHKRPASV 391
            + G  +VD IRWP S W+CL V+WD +TDS +   RVSPW IE     +  TH   +  
Sbjct: 319 LISGISEVDPIRWPGSRWKCLLVRWDDSTDS-SHQNRVSPWEIERVGGSVSVTHSLSSGS 377

Query: 392 QHQQKRLRPNDASSPWFSSLFSNG------------VFQGQENRVTGVKALGAAKTPLLP 439
           +  +         +P+   L  NG            V QGQE R +    +  +++P +P
Sbjct: 378 KRTKLHFPQGSLDTPF---LNGNGHPDSMGTENFHRVLQGQEFRGSRSHGVVCSESPGVP 434

Query: 440 SLVRPPN 446
           +   P N
Sbjct: 435 NFQSPDN 441


>sp|Q9SKN5|ARFJ_ARATH Auxin response factor 10 OS=Arabidopsis thaliana GN=ARF10 PE=2 SV=1
          Length = 693

 Score =  249 bits (637), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 152/384 (39%), Positives = 202/384 (52%), Gaps = 58/384 (15%)

Query: 46  ELWRACAGPLVYVPRVGDIVYYFLQGHMEQVEAYNSQDDKAELPIYNLPPKILCEVVYAQ 105
           +LW ACAG +V +P +   V+YF QGH E   A        +     +PP ILC VV  +
Sbjct: 10  QLWHACAGSMVQIPSLNSTVFYFAQGHTEHAHA------PPDFHAPRVPPLILCRVVSVK 63

Query: 106 LKAEPGTDEVFAQITLLPRPEIDELSLE----VGNSPPLPP-----KLNVCSFSKKLTPS 156
             A+  TDEVFA+ITLLP P  ++L LE    +G +PP        K    SF+K LT S
Sbjct: 64  FLADAETDEVFAKITLLPLPG-NDLDLENDAVLGLTPPSSDGNGNGKEKPASFAKTLTQS 122

Query: 157 DTSTHGGFSVPKRHADECLPPLDMSKDPPLQELVAKDLHGLEWRFRHIYRGQPKRHLLTS 216
           D +  GGFSVP+  A+   P LD S +PP+Q ++AKD+HG  W+FRHIYRG P+RHLLT+
Sbjct: 123 DANNGGGFSVPRYCAETIFPRLDYSAEPPVQTVIAKDIHGETWKFRHIYRGTPRRHLLTT 182

Query: 217 GWSVFVTSKKLVAGDVCIFLRGGDGELRVGVRRAMK-------------------LQNNA 257
           GWS FV  KKL+AGD  +FLR   G+L VG+RRA +                   L+++ 
Sbjct: 183 GWSTFVNQKKLIAGDSIVFLRSESGDLCVGIRRAKRGGLGSNAGSDNPYPGFSGFLRDDE 242

Query: 258 STSVISSLSMQHGILAGAFHAISTGTR-----------------FTVYYHPWTRPAEFLV 300
           ST+  S L M         +A +TG                   F V Y+P     EF V
Sbjct: 243 STTTTSKLMMMKRNGNNDGNAAATGRVRVEAVAEAVARAACGQAFEVVYYPRASTPEFCV 302

Query: 301 PFSQYMKSAEIDYSIGTRFRMVFEGEECADQRIA---GTVVGTEDVDHIRWPASEWRCLK 357
             +    +  I +  G RF+M FE E+ +  RI+   GTV   +  D IRWP S WR L+
Sbjct: 303 KAADVRSAMRIRWCSGMRFKMAFETEDSS--RISWFMGTVSAVQVADPIRWPNSPWRLLQ 360

Query: 358 VKWDATTDSITRPARVSPWNIEPI 381
           V WD   D +    RVSPW +E +
Sbjct: 361 VAWDE-PDLLQNVKRVSPWLVELV 383



 Score = 46.2 bits (108), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 43/86 (50%), Gaps = 9/86 (10%)

Query: 621 KVIKFGTALGRSVDLTRFHGYDELISELDQMFDFNGSLIDGNSGF--HIAYMDDEGDMML 678
           KV      +GR++DL+    Y EL  +L +MF      I+  S    H+ Y D  G +  
Sbjct: 584 KVFMESEDVGRTLDLSVIGSYQELYRKLAEMFH-----IEERSDLLTHVVYRDANGVIKR 638

Query: 679 VGDNPWQDFQCAVRRMFICPKEDIDG 704
           +GD P+ DF  A +R+ I  K DI G
Sbjct: 639 IGDEPFSDFMKATKRLTI--KMDIGG 662


>sp|Q9AV47|ARFV_ORYSJ Auxin response factor 22 OS=Oryza sativa subsp. japonica GN=ARF22
           PE=2 SV=1
          Length = 698

 Score =  244 bits (623), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 212/702 (30%), Positives = 297/702 (42%), Gaps = 90/702 (12%)

Query: 46  ELWRACAGPLVYVPRVGDIVYYFLQGHMEQVEAYNSQDDKA-ELPIYNLPPKILCEVVYA 104
           +LW ACAG +V +P     VYYF QGH E  +        A EL    LPP +LC V   
Sbjct: 16  QLWHACAGGMVQMPAPRSRVYYFAQGHAEHADGGGGAAAAAAELGPRALPPLVLCRVEGV 75

Query: 105 QLKAEPGTDEVFAQITLLPRP-------EIDELS-LEVGNSPPLPPKLNVCSFSKKLTPS 156
           Q  A+  +DEV+A+I L P         E DEL  L        P      SF+K LT S
Sbjct: 76  QFLADRDSDEVYAKIRLAPVAPGEAEFREPDELCPLGAAGDAAEPSPEKPTSFAKTLTQS 135

Query: 157 DTSTHGGFSVPKRHADECLPPLDMSKDPPLQELVAKDLHGLEWRFRHIYRGQPKRHLLTS 216
           D +  GGFSVP+  A+   P LD   DPP+Q ++AKD+HG+ W+FRHIYRG P+RHLLT+
Sbjct: 136 DANNGGGFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGVVWKFRHIYRGTPRRHLLTT 195

Query: 217 GWSVFVTSKKLVAGDVCIFLRGGDGELRVGVRRAMKLQNNASTSVISSLSMQHGILAGAF 276
           GWS FV  KKLVAGD  +FLR   GEL VG+RRA ++       +    +  +G   G F
Sbjct: 196 GWSTFVNQKKLVAGDSIVFLRTRHGELCVGIRRAKRMACGGMECMSGWNAPGYG--GGGF 253

Query: 277 HAI------------------------------------STGTRFTVYYHPWTRPAEFLV 300
            A                                     S+G  F V Y+P     +F+V
Sbjct: 254 SAFLKEEESKLMKGHGGGGYMKGKGKVRMADVVEAASLASSGQPFEVAYYPRASTPDFVV 313

Query: 301 PFSQYMKSAEIDYSIGTRFRMVFEGEECADQRIA---GTVVGTEDVDHIRWPASEWRCLK 357
             +    +  I +  G RF+M FE E+ +  RI+   GT+   +  D  RWP S WR L+
Sbjct: 314 KAASVQAAMRIQWCSGMRFKMAFETEDSS--RISWFMGTISSVQVADPNRWPNSPWRLLQ 371

Query: 358 VKWDATTDSITRPARVSPWNIEPIER---THKRPASVQHQQKRLRPNDASSPWFSSLFSN 414
           V WD   D +     VSPW +E +      H  P S   ++ R+ P+      F     N
Sbjct: 372 VTWD-EPDLLQNVKCVSPWLVELVSSIPPIHLGPFSSPRKKLRVPPHPDFP--FEGHLLN 428

Query: 415 GVFQGQENRVTGVKALGAAKTPLLPSLVRPPNPVWAQMQSGLENKLKFPMHDPFYMCLNR 474
            +F G          LG + +PL       P+   A +Q     +   P+ D      ++
Sbjct: 429 PIFHGN--------PLGPSNSPLCCY----PDTAPAGIQGARHAQFGLPLTD------HQ 470

Query: 475 MVSLPGGSLMSPGLSNHWPASPFAPYEVCETAAQSKNLSVPNASSENSGSQMCMALELKD 534
           +  L  G L S   +     +P  P  + +    S   +  N S   S S   +A +  D
Sbjct: 471 LNKLHLGLLHSGSFNRLDAITP--PSRISKGFVVSSAPAHDNISCLLSISTPQVAEKSDD 528

Query: 535 ENRTPLAQPNGGSRYMLFGVNLVNSPPELPSPQMATSNELESPCSVPPTSQSSISETIQV 594
              TP          MLFG  +        S    T +   +  S P  +          
Sbjct: 529 RKTTP--------HIMLFGKAIFTEQQITSSGSTETLSPGVTGNSSPNGNAHKTGNASDG 580

Query: 595 SEPSKSVSGILSEKQCKNCYVSRSCTKVIKFGTALGRSVDLTRFHGYDELISELDQMFDF 654
           S  S  +       +  +  +     KV      +GR++DL+ F  Y+EL   L  MF  
Sbjct: 581 SGSSICIGFSSQGHEASDLGLEAGHCKVFMESEDVGRTIDLSVFGSYEELYGRLADMFGI 640

Query: 655 NGSLIDGNSGFHIAYMDDEGDMMLVGDNPWQDFQCAVRRMFI 696
               I      H+ + D  G +   G+ P+ DF  A RR+ I
Sbjct: 641 EKEEIIN----HLHFRDAAGVVKHPGEVPFSDFMKAARRLTI 678


>sp|Q7XKK6|ARFJ_ORYSJ Auxin response factor 10 OS=Oryza sativa subsp. japonica GN=ARF10
           PE=2 SV=3
          Length = 699

 Score =  241 bits (614), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 148/391 (37%), Positives = 202/391 (51%), Gaps = 61/391 (15%)

Query: 34  PAEAGGKNELYNELWRACAGPLVYVPRVGDIVYYFLQGHMEQVEAYNSQDDKAELPIYNL 93
           P E  G   + ++LW ACAG +  VP VG  VYYF QGH EQ  A        +L    +
Sbjct: 10  PTEGDGGGSVDSQLWAACAGSMSSVPPVGAAVYYFPQGHAEQASA------AVDLSSARV 63

Query: 94  PPKILCEVVYAQLKAEPGTDEVFAQITLLPRPEIDELSLEVG------------NSPPLP 141
           PP + C VV  +  A+  +DEVFA+I L+P    D + ++VG            NS P P
Sbjct: 64  PPLVPCRVVAVRFMADAESDEVFAKIRLVPLRPGDAV-VDVGEAAAAEARREEENSRPRP 122

Query: 142 PKLNVCSFSKKLTPSDTSTHGGFSVPKRHADECLPPLDMSKDPPLQELVAKDLHGLEWRF 201
                 SF+K LT SD +  GGFSVP+  A+   P LD S +PP+Q + AKD+HG+EW F
Sbjct: 123 -----TSFAKTLTQSDANNGGGFSVPRFCAETIFPELDYSSEPPVQSVCAKDVHGVEWTF 177

Query: 202 RHIYRGQPKRHLLTSGWSVFVTSKKLVAGDVCIFLRGGDGELRVGVRRAMK--------- 252
           RHIYRG P+RHLLT+GWS FV  K+L AGD  +F+R   G + VG+RRA +         
Sbjct: 178 RHIYRGTPRRHLLTTGWSPFVNKKQLTAGDSIVFMRDEGGNIHVGLRRAKRGFCSIGGDD 237

Query: 253 ---------------LQNNASTSVISSLSMQHG------ILAGAFHAISTGTRFTVYYHP 291
                          ++ NA+ +     +   G      +L  A  A +TG  F V Y+P
Sbjct: 238 ESLSSIPGWDQYRGLMRRNATATATGGRTPPKGKVPPENVLTAATRA-TTGQPFEVLYYP 296

Query: 292 WTRPAEFLVPFSQYMKSAEIDYSIGTRFRMVFEGEECADQRIA---GTVVGTEDVDHIRW 348
                EF V  +    +  + +  G RF+M FE E+ +  RI+   GTV G +  D +RW
Sbjct: 297 RASTPEFCVRAAAVRTAMAVQWCPGMRFKMAFETEDSS--RISWFMGTVAGVQASDPVRW 354

Query: 349 PASEWRCLKVKWDATTDSITRPARVSPWNIE 379
           P S WR L+V WD   + +    RV PW +E
Sbjct: 355 PQSPWRLLQVTWD-EPELLQNVKRVCPWLVE 384



 Score = 38.9 bits (89), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 41/163 (25%), Positives = 65/163 (39%), Gaps = 26/163 (15%)

Query: 549 YMLFGVNLVNSPPELPSPQMATSNELESPCS-------VPPTSQSSISETIQVSEPSKSV 601
           ++LFG  +      L   Q+   N    P S        P TS+ S S   Q S P+K+ 
Sbjct: 537 FLLFGQAI------LTEEQIKNGNSDGRPASPNWDAEKAPNTSEGSDSGVTQGS-PTKNT 589

Query: 602 SGILSEKQCKNCYVSRSC--------TKVIKFGTALGRSVDLTRFHGYDELISELDQMFD 653
           +   S        +SR+          KV      +GRS+DL+    ++EL + L  MF 
Sbjct: 590 TPSWSLPYFGGNNISRASEYELNPGQCKVFVESETVGRSLDLSALSSFEELYACLSDMFS 649

Query: 654 FNGSLIDGNSGFHIAYMDDEGDMMLVGDNPWQDFQCAVRRMFI 696
                +      H+ Y    G++   GD P+  F  + R++ I
Sbjct: 650 IGSDELRS----HLVYRSPAGEVKHAGDEPFCAFVKSARKLRI 688


>sp|Q01I35|ARFJ_ORYSI Auxin response factor 10 OS=Oryza sativa subsp. indica GN=ARF10
           PE=2 SV=2
          Length = 699

 Score =  241 bits (614), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 148/391 (37%), Positives = 202/391 (51%), Gaps = 61/391 (15%)

Query: 34  PAEAGGKNELYNELWRACAGPLVYVPRVGDIVYYFLQGHMEQVEAYNSQDDKAELPIYNL 93
           P E  G   + ++LW ACAG +  VP VG  VYYF QGH EQ  A        +L    +
Sbjct: 10  PTEGDGGGSVDSQLWAACAGSMSSVPPVGAAVYYFPQGHAEQASA------AVDLSSARV 63

Query: 94  PPKILCEVVYAQLKAEPGTDEVFAQITLLPRPEIDELSLEVG------------NSPPLP 141
           PP + C VV  +  A+  +DEVFA+I L+P    D + ++VG            NS P P
Sbjct: 64  PPLVPCRVVAVRFMADAESDEVFAKIRLVPLRPGDAV-VDVGEAAAAEARREEENSRPRP 122

Query: 142 PKLNVCSFSKKLTPSDTSTHGGFSVPKRHADECLPPLDMSKDPPLQELVAKDLHGLEWRF 201
                 SF+K LT SD +  GGFSVP+  A+   P LD S +PP+Q + AKD+HG+EW F
Sbjct: 123 -----TSFAKTLTQSDANNGGGFSVPRFCAETIFPELDYSSEPPVQSVCAKDVHGVEWTF 177

Query: 202 RHIYRGQPKRHLLTSGWSVFVTSKKLVAGDVCIFLRGGDGELRVGVRRAMK--------- 252
           RHIYRG P+RHLLT+GWS FV  K+L AGD  +F+R   G + VG+RRA +         
Sbjct: 178 RHIYRGTPRRHLLTTGWSPFVNKKQLTAGDSIVFMRDEGGNIHVGLRRAKRGFCSIGGDD 237

Query: 253 ---------------LQNNASTSVISSLSMQHG------ILAGAFHAISTGTRFTVYYHP 291
                          ++ NA+ +     +   G      +L  A  A +TG  F V Y+P
Sbjct: 238 ESLSSIPGWDQYRGLMRRNATATATGGRTPPKGKVPPENVLTAATRA-TTGQPFEVLYYP 296

Query: 292 WTRPAEFLVPFSQYMKSAEIDYSIGTRFRMVFEGEECADQRIA---GTVVGTEDVDHIRW 348
                EF V  +    +  + +  G RF+M FE E+ +  RI+   GTV G +  D +RW
Sbjct: 297 RASTPEFCVRAAAVRTAMAVQWCPGMRFKMAFETEDSS--RISWFMGTVAGVQASDPVRW 354

Query: 349 PASEWRCLKVKWDATTDSITRPARVSPWNIE 379
           P S WR L+V WD   + +    RV PW +E
Sbjct: 355 PQSPWRLLQVTWD-EPELLQNVKRVCPWLVE 384



 Score = 38.9 bits (89), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 41/163 (25%), Positives = 65/163 (39%), Gaps = 26/163 (15%)

Query: 549 YMLFGVNLVNSPPELPSPQMATSNELESPCS-------VPPTSQSSISETIQVSEPSKSV 601
           ++LFG  +      L   Q+   N    P S        P TS+ S S   Q S P+K+ 
Sbjct: 537 FLLFGQAI------LTEEQIKNGNSDGRPASPNWDAEKAPNTSEGSDSGVTQGS-PTKNT 589

Query: 602 SGILSEKQCKNCYVSRSC--------TKVIKFGTALGRSVDLTRFHGYDELISELDQMFD 653
           +   S        +SR+          KV      +GRS+DL+    ++EL + L  MF 
Sbjct: 590 TPSWSLPYFGGNNISRASEYELNPGQCKVFVESETVGRSLDLSALSSFEELYACLSDMFS 649

Query: 654 FNGSLIDGNSGFHIAYMDDEGDMMLVGDNPWQDFQCAVRRMFI 696
                +      H+ Y    G++   GD P+  F  + R++ I
Sbjct: 650 IGSDELRS----HLVYRSPAGEVKHAGDEPFCAFVKSARKLRI 688


>sp|Q6K223|ARFH_ORYSJ Auxin response factor 8 OS=Oryza sativa subsp. japonica GN=ARF8
           PE=2 SV=1
          Length = 681

 Score =  238 bits (607), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 144/370 (38%), Positives = 193/370 (52%), Gaps = 35/370 (9%)

Query: 38  GGKNELYNELWRACAGPLVYVPRVGDIVYYFLQGHMEQVEAYNSQDDKAELPIYNLPPKI 97
           G +  +  +LW ACAG +  VP VG  VYYF QGH E      +     EL    +P  +
Sbjct: 13  GAERCVDRQLWLACAGGMCTVPPVGAAVYYFPQGHAEHALGLAA----PELSAARVPALV 68

Query: 98  LCEVVYAQLKAEPGTDEVFAQITLLPRPEIDELSLEVGNSPPLPPKLNVCSFSKKLTPSD 157
            C V   +  A+P TDEVFA+I L+P    ++  +E   +          SF+K LT SD
Sbjct: 69  PCRVASVRYMADPDTDEVFARIRLVPLRAAEDGDVEEDGAAAGEEHEKPASFAKTLTQSD 128

Query: 158 TSTHGGFSVPKRHADECLPPLDMSKDPPLQELVAKDLHGLEWRFRHIYRGQPKRHLLTSG 217
            +  GGFSVP+  A+   P LD + DPP+Q +VAKD+HG+ W FRHIYRG P+RHLLT+G
Sbjct: 129 ANNGGGFSVPRYCAETIFPRLDYAADPPVQTVVAKDVHGVAWNFRHIYRGTPRRHLLTTG 188

Query: 218 WSVFVTSKKLVAGDVCIFLRGGDGELRVGVRRAMK-----------------------LQ 254
           WS FV  KKLVAGD  +FLRG  G+L VG+RRA +                       ++
Sbjct: 189 WSTFVNQKKLVAGDSIVFLRGDGGDLHVGIRRAKRGFCGGGGGAEEASLPGWDQYGGLMR 248

Query: 255 NNAS--TSVISSLSMQHGILAGAFHAISTGTRFTVYYHPWTRPAEFLVPFSQYMKSAEID 312
            NAS   +      ++   L  A    + G  F V Y+P     EF V  +    +  + 
Sbjct: 249 GNASPCAAAKGRGKVRAEDLVEAARLANGGQPFEVVYYPRASTPEFCVRAAAVRAAMRVQ 308

Query: 313 YSIGTRFRMVFEGEECADQRIA---GTVVGTEDVDHIRWPASEWRCLKVKWDATTDSITR 369
           +  G RF+M FE E+ +  RI+   GTV   +  D IRWP S WR L+V WD   D +  
Sbjct: 309 WCPGMRFKMAFETEDSS--RISWFMGTVASVQVADPIRWPQSPWRLLQVTWD-EPDLLQN 365

Query: 370 PARVSPWNIE 379
             RVSPW +E
Sbjct: 366 VKRVSPWLVE 375



 Score = 37.7 bits (86), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 30/116 (25%), Positives = 52/116 (44%), Gaps = 16/116 (13%)

Query: 582 PTSQSSISETIQVSEPSKSVSGI-LSEKQCKNCYVSRSCTKVIKFGTALGRSVDLTRFHG 640
           PT  +S SE +Q    + +VS + L   QCK          V      +GR++DL+    
Sbjct: 570 PTDNTS-SERLQWFRENSTVSELGLEPGQCK----------VFIESDTVGRNLDLSSLAS 618

Query: 641 YDELISELDQMFDFNGSLIDGNSGFHIAYMDDEGDMMLVGDNPWQDFQCAVRRMFI 696
           +++L   L +MF  + + +       + Y    G++   GD P+ +F    RR+ I
Sbjct: 619 FEQLYGRLSEMFCIDSAELRS----RVLYRGATGEVRHAGDEPFSEFIKLARRLTI 670


>sp|Q93YR9|ARFP_ARATH Auxin response factor 16 OS=Arabidopsis thaliana GN=ARF16 PE=2 SV=1
          Length = 670

 Score =  236 bits (601), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 156/414 (37%), Positives = 217/414 (52%), Gaps = 64/414 (15%)

Query: 34  PAEAGGKNELYNELWRACAGPLVYVPRVGDIVYYFLQGHMEQVEAYNSQDDKAELPIYNL 93
           P + G +  L  +LW ACAG +V +P +   V+YF QGH E   AY+  D    LPI   
Sbjct: 7   PMKGGTEKGLDPQLWHACAGGMVRMPPMNSKVFYFPQGHAEN--AYDCVD-FGNLPI--- 60

Query: 94  PPKILCEVVYAQLKAEPGTDEVFAQITLLPRPEIDELSLEVG----------NSPPLPPK 143
           PP +LC V+  +  A+  +DEVFA++ L+P  + + +  E G          NS   P  
Sbjct: 61  PPMVLCRVLAIKYMADAESDEVFAKLRLIPLKDDEYVDHEYGDGEDSNGFESNSEKTP-- 118

Query: 144 LNVCSFSKKLTPSDTSTHGGFSVPKRHADECLPPLDMSKDPPLQELVAKDLHGLEWRFRH 203
               SF+K LT SD +  GGFSVP+  A+   P LD + +PP+Q ++AKD+HG  W+FRH
Sbjct: 119 ----SFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYNAEPPVQTILAKDVHGDVWKFRH 174

Query: 204 IYRGQPKRHLLTSGWSVFVTSKKLVAGDVCIFLRGGDGELRVGVRRAMK----------- 252
           IYRG P+RHLLT+GWS FV  KKLVAGD  +F+R  +G+L VG+RRA +           
Sbjct: 175 IYRGTPRRHLLTTGWSNFVNQKKLVAGDSIVFMRAENGDLCVGIRRAKRGGIGNGPEYSA 234

Query: 253 --------------LQNNASTSVISS---LSMQHG------ILAGAFHAISTGTRFTVYY 289
                         L+ + S S+  S   L+ + G      ++  A  AIS G  F V Y
Sbjct: 235 GWNPIGGSCGYSSLLREDESNSLRRSNCSLADRKGKVTAESVIEAATLAIS-GRPFEVVY 293

Query: 290 HPWTRPAEFLVPFSQYMKSAEIDYSIGTRFRMVFEGEECADQRIA---GTVVGTEDVDHI 346
           +P    +EF V       +  I +  G RF+M FE E+ +  RI+   GTV      D I
Sbjct: 294 YPRASTSEFCVKALDARAAMRIPWCSGMRFKMAFETEDSS--RISWFMGTVSAVNVSDPI 351

Query: 347 RWPASEWRCLKVKWDATTDSITRPARVSPWNIEPIERTHKRP-ASVQHQQKRLR 399
           RWP S WR L+V WD   D +    RV+PW +E +   H  P  S    +K++R
Sbjct: 352 RWPNSPWRLLQVAWDE-PDLLQNVKRVNPWLVELVSNVHPIPLTSFSPPRKKMR 404



 Score = 40.0 bits (92), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 4/86 (4%)

Query: 621 KVIKFGTALGRSVDLTRFHGYDELISELDQMFDFNGSLIDGNSGFHIAYMDDEGDMMLVG 680
           KV      +GR++DL+    Y+EL  +L  MF    S +  +    + Y D  G +   G
Sbjct: 588 KVFMESDDVGRTLDLSVLGSYEELSRKLSDMFGIKKSEMLSS----VLYRDASGAIKYAG 643

Query: 681 DNPWQDFQCAVRRMFICPKEDIDGVI 706
           + P+ +F    RR+ I  ++  + V+
Sbjct: 644 NEPFSEFLKTARRLTILTEQGSESVV 669


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.317    0.133    0.413 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 286,246,623
Number of Sequences: 539616
Number of extensions: 12628709
Number of successful extensions: 29620
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 152
Number of HSP's successfully gapped in prelim test: 42
Number of HSP's that attempted gapping in prelim test: 29024
Number of HSP's gapped (non-prelim): 294
length of query: 716
length of database: 191,569,459
effective HSP length: 125
effective length of query: 591
effective length of database: 124,117,459
effective search space: 73353418269
effective search space used: 73353418269
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 65 (29.6 bits)