BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005065
(715 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|356542179|ref|XP_003539547.1| PREDICTED: uncharacterized protein LOC100781720 [Glycine max]
Length = 901
Score = 711 bits (1836), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/686 (58%), Positives = 462/686 (67%), Gaps = 79/686 (11%)
Query: 1 MASGPIVEGNDGANREKQRYSESKVYTRKAFKGPKKQNTNATATAAADNTNAPAAAANNV 60
MASGPIV G+DGA +EKQRY+ESKVYTRKAFKGPK + A P V
Sbjct: 256 MASGPIV-GDDGA-KEKQRYTESKVYTRKAFKGPKNKGNAVITVNAVPPPPPPPPPPAAV 313
Query: 61 SAVTTTTATTTTTITTDVTANENNRDENNDVEIDKDGNNGSEGNKNENDATENSKNEYNG 120
+ + T I D +N+ +N DV + NN S
Sbjct: 314 ATTNGGDDGSATVIAVDYNNKDNSTVDNGDVRAKDNSNNASV------------------ 355
Query: 121 TKSFMNQNNGIENNRNENDNEKSSIPEQPTQTLTVADTNLDQQPVVSHLDAASDDSSSLN 180
+PE D N + V S LD SDDSSSLN
Sbjct: 356 ----------------------QPVPE---------DGNSARPQVNSMLDTVSDDSSSLN 384
Query: 181 RQQGGVVVAATTREAPSENGVVAVKSG-DGRVKISLGSSTKREMREIRKKLEIELDTVRS 239
R Q E S GV G + V+ISL S +K+E RE+R++L+ EL+ VRS
Sbjct: 385 RPQD---------EPFSVPGVGERSPGPENCVRISLASRSKQEKRELRRRLQGELNRVRS 435
Query: 240 LVKRIEAKEVQISGGVSNSGVLPVSDVVDNGI--KRGHSEVASVGV-PVTRVGITRPSRP 296
LV RIE K + + GG NS ++ V + NG+ KR HSEVAS V P R P+RP
Sbjct: 436 LVNRIEEK-LGVLGGYGNSDMM-VDRGIGNGVGAKRAHSEVASAVVTPRER----EPTRP 489
Query: 297 LNQLSISTVENSLGLSENVEKEKRTPKANQFYRNSEFLLAKDKFPPAESNKKSKLNGKKQ 356
L+QLS+S +ENS G++E VEKEKRTP ANQFYRNSEFLL KDKFPPAESNKKSKLNGKK
Sbjct: 490 LHQLSVSVLENSQGVTEIVEKEKRTPTANQFYRNSEFLLGKDKFPPAESNKKSKLNGKKH 549
Query: 357 AGNELAHGFGTGSKIFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLG 416
E+ HG G SK+ KSCSALLEKLMKHKHGWVFNAPVDV+ LGLHDYF+II HPMDLG
Sbjct: 550 VEGEMGHGMG--SKLLKSCSALLEKLMKHKHGWVFNAPVDVEGLGLHDYFSIITHPMDLG 607
Query: 417 TVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEY 476
TVK+RLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLL IFE++W +IES Y
Sbjct: 608 TVKSRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLNIFEERWAIIESNY 667
Query: 477 NREMRIGADYEMGFHTPTSRKAPPL-PPPLDMRRILDRSESITHPMDSRLKPISTTPSSR 535
RE+R G DY G +P SRKAPP PPP+DMRRILDRSES+T P K + TPSSR
Sbjct: 668 YREIRYGLDY--GAPSPVSRKAPPFRPPPIDMRRILDRSESMTQPP----KIMGITPSSR 721
Query: 536 TPAPKKPKAKDPHKRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEV 595
TPAPKKPKAKDPHKRDMTY+EKQKLST+LQSLPSEKLD IVQIIKKRNS+L QHDDEIEV
Sbjct: 722 TPAPKKPKAKDPHKRDMTYEEKQKLSTHLQSLPSEKLDAIVQIIKKRNSALSQHDDEIEV 781
Query: 596 DIDSVDAETLWELDRFVTNYKKSLSKNKRKAELANQARAVAQQNVQQQTPAPVVTEVRKE 655
DIDSVD ETLWELDRFVTNYKKSLSKNKRKAELA AR A+QN QQ++ APV E+ KE
Sbjct: 782 DIDSVDTETLWELDRFVTNYKKSLSKNKRKAELAILARERAEQNAQQKSQAPVAVEIPKE 841
Query: 656 IRTDDRIGSTSSPVQVEKQVDNGSRS 681
+ D+R S P Q + VDNGS++
Sbjct: 842 TQADERNVPPSLPEQGQIPVDNGSKT 867
>gi|356546972|ref|XP_003541893.1| PREDICTED: transcription factor GTE4-like [Glycine max]
Length = 640
Score = 705 bits (1820), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/685 (58%), Positives = 460/685 (67%), Gaps = 83/685 (12%)
Query: 1 MASGPIVEGNDGANREKQRYSESKVYTRKAFKGPKKQNTNATATAAADNTNAPAAAANNV 60
MASGPIV G+DGA +EKQRY+ESKVYTRKAFKGPK + NA +T A P AAA
Sbjct: 1 MASGPIV-GDDGA-KEKQRYTESKVYTRKAFKGPKNKG-NAFSTVNA--VPPPTAAA--- 52
Query: 61 SAVTTTTATTTTTITTDVTANENNRDENNDVEIDKDGNNGSEGNKNENDATENSKNEYNG 120
TT + T V N++N NN KD +N + E
Sbjct: 53 ---TTNGGDNGSATATAVDYNKDNSTVNNGDVRAKDNSNNASVLPVPVPVPE-------- 101
Query: 121 TKSFMNQNNGIENNRNENDNEKSSIPEQPTQTLTVADTNLDQQPVVSHLDAASDDSSSLN 180
D N + V S LD SDDSSSLN
Sbjct: 102 ------------------------------------DGNSARPQVNSRLDVISDDSSSLN 125
Query: 181 RQQGGVVVAATTRE-APSENGVVAVKSGDGRVKISLGSSTKREMREIRKKLEIELDTVRS 239
R + + RE +P V +ISL S +K+E RE+R++L+ EL VRS
Sbjct: 126 RPRDEPLSVPGVRERSPGPENCV---------RISLASRSKQEKRELRRRLQGELIRVRS 176
Query: 240 LVKRIEAKEVQISGGVSNSGVLPVSDVVDNGI--KRGHSEVASVGVPVTRVGITRPSRPL 297
LV IE K + + GG NS + V + NGI KR HSEVAS V + P+RPL
Sbjct: 177 LVNGIEEK-LGVLGGYGNSDRM-VDRGIGNGIGAKRAHSEVASA-----VVTLREPTRPL 229
Query: 298 NQLSISTVENSLGLSENVEKEKRTPKANQFYRNSEFLLAKDKFPPAESNKKSKLNGKKQA 357
+QLS+S +ENS G+ E VEKEKRTPKANQFYRNSEFLLAKDKFPPAESNKKSKLNGKK
Sbjct: 230 HQLSVSVLENSQGVGEIVEKEKRTPKANQFYRNSEFLLAKDKFPPAESNKKSKLNGKKHG 289
Query: 358 GNELAHGFGTGSKIFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGT 417
E+ HG G SK+ KSCS+LLEKLMKHKHGWVF+ PVDV+ LGLHDYF+II HPMDLGT
Sbjct: 290 TGEMGHGMG--SKLLKSCSSLLEKLMKHKHGWVFDTPVDVEGLGLHDYFSIITHPMDLGT 347
Query: 418 VKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYN 477
VK+RLNKNWY+SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQL IFE++W +IES YN
Sbjct: 348 VKSRLNKNWYRSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLSNIFEERWAIIESNYN 407
Query: 478 REMRIGADYEMGFHTPTSRKAPPL-PPPLDMRRILDRSESITHPMDSRLKPISTTPSSRT 536
REM G DY G +P SRKAPP PPP+DMRRILDRSES+T P K + TPSSRT
Sbjct: 408 REMTYGLDY--GAPSPVSRKAPPFRPPPIDMRRILDRSESMTQPP----KIMGITPSSRT 461
Query: 537 PAPKKPKAKDPHKRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVD 596
PAPKKPKAKDPHKRDMTY+EKQKLST+LQSLPSEKLD IVQIIKKRNS+L QHDDEIEVD
Sbjct: 462 PAPKKPKAKDPHKRDMTYEEKQKLSTHLQSLPSEKLDAIVQIIKKRNSALSQHDDEIEVD 521
Query: 597 IDSVDAETLWELDRFVTNYKKSLSKNKRKAELANQARAVAQQNVQQQTPAPVVTEVRKEI 656
IDSVD ETLWELDRFVTNYKKSLSKNKRKAELA QAR A+QN QQ++ APV E+ E
Sbjct: 522 IDSVDTETLWELDRFVTNYKKSLSKNKRKAELAIQAREQAEQNAQQKSQAPVEVEIPTET 581
Query: 657 RTDDRIGSTSSPVQVEKQVDNGSRS 681
+ D+R S P Q + VDNGS++
Sbjct: 582 QADERNVPPSLPEQGQVPVDNGSKT 606
>gi|225446551|ref|XP_002276195.1| PREDICTED: transcription factor GTE4-like [Vitis vinifera]
Length = 654
Score = 651 bits (1679), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/566 (61%), Positives = 424/566 (74%), Gaps = 46/566 (8%)
Query: 138 NDNEKSSIPEQPTQTLTVADTNLDQQPV-VSHLDAASDDSSSLNRQQGGVVVAATTREAP 196
N+++ +S P+QP Q + N QQP ++ A SDDSSSL+R + ++ P
Sbjct: 70 NNSDNNSTPQQPVQAVASEHANSSQQPREINAETAVSDDSSSLSR--AHLAEPSSIEAPP 127
Query: 197 SENGVVAVKSG----DGRVKISLGSSTKREMREIRKKLEIELDTVRSLVKRIEAKEVQIS 252
+ NG AVK G + R+KI+L + +K+E RE+R+KL+ ELD VRSLVK+IEAK+V S
Sbjct: 128 AGNG--AVKPGISRLENRIKINLATRSKQETRELRRKLQTELDLVRSLVKKIEAKDVLGS 185
Query: 253 GGVSNSGVLPVSDVVDNGI-KRGHSEVASV--GVPVTRVGITRP---------------S 294
G VVD+ + KR SEVASV P+ + +RP S
Sbjct: 186 EG----------GVVDDSVAKRVSSEVASVNESRPLQQ---SRPLQQSRSFPQAKSLSQS 232
Query: 295 RPLNQLSISTVENSLGLSENVEKEKRTPKANQFYRNSEFLLAKDKFPPAESNKKSKLNGK 354
RPL+QLSIS +ENS G S+ VEKEKRTPKANQFYRNSEFLL K+KFP ESNKK+KLNGK
Sbjct: 233 RPLHQLSISVIENSQGGSDVVEKEKRTPKANQFYRNSEFLLGKEKFP-TESNKKTKLNGK 291
Query: 355 KQAGNELAHGFGTGSKIFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMD 414
K G E +G +K FK+C ALLE+LMKHKHGWVFN+PVDVK LGLHDYF+II PMD
Sbjct: 292 KHGGVEPGYGSAM-NKCFKNCGALLERLMKHKHGWVFNSPVDVKGLGLHDYFSIITDPMD 350
Query: 415 LGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIES 474
LGTVK+RLNKNWYKSP+EFAEDVRLTFHNAMTYNPKGQDVH+MAE L KIFEDKW VIE+
Sbjct: 351 LGTVKSRLNKNWYKSPREFAEDVRLTFHNAMTYNPKGQDVHVMAEVLSKIFEDKWAVIEA 410
Query: 475 EYNREMRIGADYEMGFHTPTSRKAPPLPPPL---DMRRILDRSESITHPMDSRLKPISTT 531
EY+RE+R+G +YEMG TPTSRK P PP L +MRR+LDRSES+T+ +D ++KP++ T
Sbjct: 411 EYSRELRLGYEYEMGLPTPTSRKLPAPPPMLPSHEMRRVLDRSESMTYAVDPKIKPMNYT 470
Query: 532 PSSRTPAPKKPKAKDPHKRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDD 591
P RTP+ KKPKAKDP+KRDMT++EKQKLSTNLQ+LPSEKLDNIV IIK+ NS+L Q +D
Sbjct: 471 PLVRTPSLKKPKAKDPNKRDMTFEEKQKLSTNLQNLPSEKLDNIVHIIKRNNSALCQDND 530
Query: 592 EIEVDIDSVDAETLWELDRFVTNYKKSLSKNKRKAELANQARAVAQQNVQQQTPAPVVTE 651
EIEVDIDSVDAETLWELDR+VTNYKKSLSKNKRKAELA QARA A + +Q++ P PVVTE
Sbjct: 531 EIEVDIDSVDAETLWELDRYVTNYKKSLSKNKRKAELA-QARAEAARKIQERNPVPVVTE 589
Query: 652 VRKEIRTDDRIGSTSSPVQVEKQVDN 677
+E D+R S+SSPVQ EKQ +N
Sbjct: 590 AARETNIDERNISSSSPVQGEKQGEN 615
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/39 (69%), Positives = 31/39 (79%), Gaps = 4/39 (10%)
Query: 1 MASGPIVEGNDGA----NREKQRYSESKVYTRKAFKGPK 35
MASGPIV+G G +REK+R+ ESKVYTRKAFKGPK
Sbjct: 1 MASGPIVDGGGGGGGDGSREKKRWQESKVYTRKAFKGPK 39
>gi|356545057|ref|XP_003540962.1| PREDICTED: transcription factor GTE4-like [Glycine max]
Length = 874
Score = 650 bits (1676), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/540 (66%), Positives = 410/540 (75%), Gaps = 27/540 (5%)
Query: 148 QPTQTLTVADTNLDQQP-VVSHLDAASDD---SSSLNRQQGGVVVAATTREAPSENGVVA 203
QP L V+D + +QP S+L+ D SS +++Q+ ++R+ NGVV
Sbjct: 314 QPLVVL-VSDDSCSRQPDEPSNLNVQLQDDGPSSPIHQQEA----VPSSRDLTLGNGVVE 368
Query: 204 VKSGDGRVKISLGSSTKREMREIRKKLEIELDTVRSLVKRIEAKEVQISGGVSNSGVLPV 263
+ D R+KI+L S +K++MRE+R KLE EL VR LV RIE K+ + GG NS VL +
Sbjct: 369 PQWRD-RIKINLASKSKQQMRELRWKLERELGIVRCLVNRIEVKQRPV-GGYGNSNVL-I 425
Query: 264 SDVVDN--GIKRGHSEVASVGVPVTRVGITRPSRPLNQLSISTVENSLGLSENVEKEKRT 321
++N G KR HSEVAS GVP +RPL+QLS+S +ENS G+ E VEKEKRT
Sbjct: 426 DSGINNVGGAKRAHSEVASAGVPREPAS----TRPLHQLSLSMLENSQGICETVEKEKRT 481
Query: 322 PKANQFYRNSEFLLAKDKFPPAESNKKSKLNGKKQAGNELAHGFGTGSKIFKSCSALLEK 381
PKANQFYRNSEFLLAKDKFPPAESNKKSKLN KKQ G E+ HGFG GSK FKSCS+LLEK
Sbjct: 482 PKANQFYRNSEFLLAKDKFPPAESNKKSKLNWKKQGGGEMGHGFGMGSKFFKSCSSLLEK 541
Query: 382 LMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTF 441
LMKHKHGWVFNAPVDV+ LGLHDYFTII HPMDLGTVK+RLNKNWYKSPKEFAEDVRLTF
Sbjct: 542 LMKHKHGWVFNAPVDVEALGLHDYFTIITHPMDLGTVKSRLNKNWYKSPKEFAEDVRLTF 601
Query: 442 HNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEM--GFHTPTSRKAP 499
NAMTYNP GQDVHIMAEQL KIFED+W +IES+YNREMR G DY +P SR+
Sbjct: 602 RNAMTYNPPGQDVHIMAEQLSKIFEDRWAIIESDYNREMRYGFDYGAVAPALSPLSRRVS 661
Query: 500 PL-PPPLDMRRILDRSESITHPMDSRLKPISTTPSSRTPAPKKPKAKDPHKRDMTYDEKQ 558
PPPLDMRRIL+RSES+T RL +S TPSSRTPAPKKPKAKDPHKRDMT++EKQ
Sbjct: 662 AFTPPPLDMRRILNRSESMTQ--TPRL--MSITPSSRTPAPKKPKAKDPHKRDMTFEEKQ 717
Query: 559 KLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWELDRFVTNYKKS 618
KLSTNLQSLPSEKLD IVQIIKKRNS+L QHDDEIEVDIDSVDAETLWELDRFVTNYKKS
Sbjct: 718 KLSTNLQSLPSEKLDAIVQIIKKRNSALNQHDDEIEVDIDSVDAETLWELDRFVTNYKKS 777
Query: 619 LSKNKRKAELANQARAVA-QQNVQQQTPAPVVTEVRKEIRTDDRIGSTSSPVQVEKQVDN 677
LSKNKRKAELA QARA A QQN Q++ AP + E+ KE TD+R P Q Q DN
Sbjct: 778 LSKNKRKAELA-QARAEALQQNAIQKSQAPAMAEIPKETLTDERNLPQPLPAQRGNQADN 836
Score = 46.2 bits (108), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 41/72 (56%), Gaps = 5/72 (6%)
Query: 1 MASGPIVEGNDGANREKQRYSESKVYTRKAFKGPKKQNTNATATAAADNTNAPAAAANNV 60
MAS P+V G+D A REKQR+ E KVYTR+ K++ NA A+ +N A + N+
Sbjct: 1 MASEPMVGGDDEA-REKQRFGERKVYTRRKV----KKDPNAVASTTENNGTATSTVTNDN 55
Query: 61 SAVTTTTATTTT 72
S +T + T
Sbjct: 56 SVSNSTVQKSNT 67
>gi|147820894|emb|CAN67478.1| hypothetical protein VITISV_035453 [Vitis vinifera]
Length = 660
Score = 649 bits (1675), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/567 (61%), Positives = 426/567 (75%), Gaps = 48/567 (8%)
Query: 138 NDNEKSSIPEQPTQTLTVADTNLDQQPV-VSHLDAASDDSSSLNRQQGGVVVAATTREAP 196
N+++ +S P+QP Q + N QQP ++ A SDDSSSL+R + ++ P
Sbjct: 70 NNSDNNSTPQQPVQAVASEHANSSQQPREINAETAVSDDSSSLSR--AHLAEPSSIEAPP 127
Query: 197 SENGVVAVKSG----DGRVKISLGSSTKREMREIRKKLEIELDTVRSLVKRIEAKEVQIS 252
+ NG AVK G + R+KI+L + +K+E RE+R+KL+ ELD VRSLVK+IEAK+V S
Sbjct: 128 AGNG--AVKPGISRLENRIKINLATRSKQETRELRRKLQTELDLVRSLVKKIEAKDVLGS 185
Query: 253 GGVSNSGVLPVSDVVDNGI-KRGHSEVASV--GVPVTRVGITRP---------------S 294
G VVD+ + KR SEVASV P+ + +RP S
Sbjct: 186 EG----------GVVDDSVAKRVSSEVASVNESRPLQQ---SRPLQQSRSFPQAKSLSQS 232
Query: 295 RPLNQLSISTVENSLGLSENVEKEKRTPKANQFYRNSEFLLAKDKFPPAESNKKSKLNGK 354
RPL+QLSIS +ENS G S+ VEKEKRTPKANQFYRNSEFLL K+KFP ESNKK+KLNGK
Sbjct: 233 RPLHQLSISVIENSQGGSDVVEKEKRTPKANQFYRNSEFLLGKEKFP-TESNKKTKLNGK 291
Query: 355 KQAGNELAHGFGTG-SKIFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPM 413
K G E G+G+ +K FK+C ALLE+LMKHKHGWVFN+PVDVK LGLHDYF+II PM
Sbjct: 292 KHGGVE--PGYGSAMNKCFKNCGALLERLMKHKHGWVFNSPVDVKGLGLHDYFSIITDPM 349
Query: 414 DLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIE 473
DLGTVK+RLNKNWYKSP+EFAEDVRLTFHNAMTYNPKGQDVH+MAE L KIFEDKW VIE
Sbjct: 350 DLGTVKSRLNKNWYKSPREFAEDVRLTFHNAMTYNPKGQDVHVMAEVLSKIFEDKWAVIE 409
Query: 474 SEYNREMRIGADYEMGFHTPTSRKAPPLPPPL---DMRRILDRSESITHPMDSRLKPIST 530
+EY+RE+R+G +YEMG TPTSRK P PP L +MRR+LDRSES+T+ +D ++KP++
Sbjct: 410 AEYSRELRLGYEYEMGLPTPTSRKLPAPPPMLPSHEMRRVLDRSESMTYAVDPKIKPMNY 469
Query: 531 TPSSRTPAPKKPKAKDPHKRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD 590
TP RTP+ KKPKAKDP+KRDMT++EKQKLSTNLQ+LPSEKLDNIV IIK+ NS+L Q +
Sbjct: 470 TPLVRTPSLKKPKAKDPNKRDMTFEEKQKLSTNLQNLPSEKLDNIVHIIKRNNSALCQDN 529
Query: 591 DEIEVDIDSVDAETLWELDRFVTNYKKSLSKNKRKAELANQARAVAQQNVQQQTPAPVVT 650
DEIEVDIDSVDAETLWELDR+VTNYKKSLSKNKRKAELA QARA A + +Q++ P PVVT
Sbjct: 530 DEIEVDIDSVDAETLWELDRYVTNYKKSLSKNKRKAELA-QARAEAARKIQERNPVPVVT 588
Query: 651 EVRKEIRTDDRIGSTSSPVQVEKQVDN 677
E +E D+R S+SSPVQ EKQ +N
Sbjct: 589 EAARETNIDERNISSSSPVQGEKQGEN 615
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/39 (69%), Positives = 31/39 (79%), Gaps = 4/39 (10%)
Query: 1 MASGPIVEGNDGA----NREKQRYSESKVYTRKAFKGPK 35
MASGPIV+G G +REK+R+ ESKVYTRKAFKGPK
Sbjct: 1 MASGPIVDGGGGGGGDGSREKKRWQESKVYTRKAFKGPK 39
>gi|356515098|ref|XP_003526238.1| PREDICTED: uncharacterized protein LOC100780669 [Glycine max]
Length = 971
Score = 647 bits (1668), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 354/537 (65%), Positives = 401/537 (74%), Gaps = 21/537 (3%)
Query: 148 QPTQTLTVADTNLDQ--QPVVSHLDAASDDSSSLNRQQGGVVVAATTREAPSENGVVAVK 205
QP+ L D+ Q +P ++ D SS NRQQ V ++R+ NGV
Sbjct: 411 QPSAVLVSDDSRSRQPDEPSSLNVQQQDDGPSSPNRQQEAV---PSSRDLILGNGVAEPW 467
Query: 206 SGDGRVKISLGSSTKREMREIRKKLEIELDTVRSLVKRIEAKEVQISGGVSNSGVLPVSD 265
D R+KI+L S +K++MRE+R KLE EL VRSLV RIE K+ Q+ GG NS VL +
Sbjct: 468 RRD-RIKINLASKSKQQMRELRWKLESELGVVRSLVNRIEVKQRQV-GGFGNSDVL-IDS 524
Query: 266 VVDN--GIKRGHSEVASVGVPVTRVGITRPSRPLNQLSISTVENSLGLSENVEKEKRTPK 323
++N G KR HSEVAS VP +RPL+QLS+S +EN G+ E VEKEKRTPK
Sbjct: 525 GINNVGGAKRAHSEVASACVPREPAS----TRPLHQLSLSMLENGQGICETVEKEKRTPK 580
Query: 324 ANQFYRNSEFLLAKDKFPPAESNKKSKLNGKKQAGNELAHGFGTGSKIFKSCSALLEKLM 383
ANQFYRNSEFLLAKDKFP AESNKKSKLN KKQ G E+ HGFG GSK FKSCS+LLEKLM
Sbjct: 581 ANQFYRNSEFLLAKDKFPSAESNKKSKLNWKKQGGGEMGHGFGMGSKFFKSCSSLLEKLM 640
Query: 384 KHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHN 443
+HKHGWVFN+PVDV+ LGLHDYFTII HPMDLGTVKTRLNKNWYKSPKEFAEDVRLTF N
Sbjct: 641 RHKHGWVFNSPVDVETLGLHDYFTIITHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFRN 700
Query: 444 AMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEMG--FHTPTSRKAPPL 501
AMTYNP+GQDVHIMAE L KIFED+W +IES+YNREMR G DY +P SR+
Sbjct: 701 AMTYNPQGQDVHIMAELLSKIFEDRWAIIESDYNREMRYGFDYRAAPPAPSPLSRRVSAF 760
Query: 502 -PPPLDMRRILDRSESITHPMDSRLKPISTTPSSRTPAPKKPKAKDPHKRDMTYDEKQKL 560
PPPLDMRRILDRS+S+T RL +S TPSSRTPAPKKPKAKDPHKRDMT++EKQKL
Sbjct: 761 TPPPLDMRRILDRSDSMTQ--TPRL--MSITPSSRTPAPKKPKAKDPHKRDMTFEEKQKL 816
Query: 561 STNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWELDRFVTNYKKSLS 620
STNLQSLPSEKLD IVQIIKKRNS+L QHDDEIEVDIDSVDAETLWELDRFVTNYKKSLS
Sbjct: 817 STNLQSLPSEKLDAIVQIIKKRNSALNQHDDEIEVDIDSVDAETLWELDRFVTNYKKSLS 876
Query: 621 KNKRKAELANQARAVAQQNVQQQTPAPVVTEVRKEIRTDDRIGSTSSPVQVEKQVDN 677
KNKRKAELA QQN Q++ AP + E+ KE +TD+R PVQ Q DN
Sbjct: 877 KNKRKAELARARAEALQQNAIQKSQAPAMAEIPKETQTDERSLPQPLPVQGRNQADN 933
Score = 45.4 bits (106), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 41/72 (56%), Gaps = 5/72 (6%)
Query: 1 MASGPIVEGNDGANREKQRYSESKVYTRKAFKGPKKQNTNATATAAADNTNAPAAAANNV 60
MAS P+V G+D A REKQR+ E KVYTR+ K++ A A+A +N A + N+
Sbjct: 1 MASEPMVGGDDEA-REKQRFGERKVYTRRKV----KKDPKAVASAIENNGTATSTVTNDN 55
Query: 61 SAVTTTTATTTT 72
S +T + T
Sbjct: 56 SVSNSTVQKSNT 67
>gi|449526541|ref|XP_004170272.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor GTE4-like
[Cucumis sativus]
Length = 629
Score = 634 bits (1634), Expect = e-179, Method: Compositional matrix adjust.
Identities = 367/678 (54%), Positives = 438/678 (64%), Gaps = 93/678 (13%)
Query: 1 MASGPIVEGNDGANREKQRYSESKVYTRKAFKGPKKQNTNATATAAADNTNAPAAAANNV 60
MAS PI G D R KQR SE KVY RK F+G K QNT
Sbjct: 1 MASAPIAGGEDEG-RIKQRCSEYKVYRRKTFRGVKNQNT--------------------P 39
Query: 61 SAVTTTTATTTTTITTDVTANENNRDENNDVEIDKDGNNGSEGNKNENDATENSKNEYNG 120
S + T +TTTT DKD N +NEN ++N
Sbjct: 40 SVTPSITVSTTTT--------------------DKDPNI-----RNENATIA----KFNN 70
Query: 121 TKSFMNQNNGIENNRNENDNEKSSIPEQPTQTLTVADTNLDQQPVVSHLDAASDDSSSLN 180
K F N ++ +E E + +QP Q DAAS+D L
Sbjct: 71 VKDFNNNSDQAVPRSSEASEEANLYQQQPLQ------------------DAASEDDD-LT 111
Query: 181 RQQGGVVVAATTREA----PSENGVVAVKSG-DGRVKISLGSSTKREMREIRKKLEIELD 235
R G V V EA PS NG V +KSG D ++ S K+EM+E+R+K E EL+
Sbjct: 112 RLDGQVSVGPAVEEANQDLPSVNGGV-IKSGFDDHNRVDSASKPKQEMQELRRKFESELE 170
Query: 236 TVRSLVKRIEAKEVQISGGVSNSGV--LPVSDVVDNGIKRGHSEVASVGVPVTRVGITRP 293
VR+LVKRIEA + Q++ G ++S V + +SD G HSEV SVGVP T
Sbjct: 171 VVRNLVKRIEAIQGQLNSGHTHSHVSTMEISDNC-RGAYPVHSEVGSVGVP------TEN 223
Query: 294 SRPLNQLSISTVENSLGLSENVEKEKRTPKANQFYRNSEFLLAKDKFPPAESNKKSKLNG 353
SR L QLS+S +EN G+ + +E+EKRTPKANQFYRNSEFLLAKD+ PPAESNKKSKLNG
Sbjct: 224 SRALRQLSLSVMENGKGVHDFMEREKRTPKANQFYRNSEFLLAKDRIPPAESNKKSKLNG 283
Query: 354 KKQAGNELAHGFGTGSKIFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPM 413
KK++ + +GFG G+KIF +C +LLEKLMKHKHGWVFN PVDV+ L LHDYF+IIRHPM
Sbjct: 284 KKRSXAKFNYGFGMGTKIFNACVSLLEKLMKHKHGWVFNTPVDVEGLCLHDYFSIIRHPM 343
Query: 414 DLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIE 473
DLGTVKTRLNKNWYKSPKEFAEDVRLTF NAMTYNPKGQDVHIMAEQLLKIFED+WVVIE
Sbjct: 344 DLGTVKTRLNKNWYKSPKEFAEDVRLTFQNAMTYNPKGQDVHIMAEQLLKIFEDRWVVIE 403
Query: 474 SEYNREMRIGADYEMGFHTPTSRKAPPLPPPLDMRRILDRSESITHPMDSRLKPISTTPS 533
S Y +EMR+G +Y + S + P P PLDMR+IL RS+S+ +P DSR +P+S TPS
Sbjct: 404 SNYYQEMRLGMEYGGPLPSSNSVRGHPRPVPLDMRKILRRSDSLINPADSRTQPMSVTPS 463
Query: 534 SRTPAPKKPKAKDPHKRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEI 593
+RTP+ KKPKAKD KRDMTY+EK+KLSTNLQ+LPSEKLD I+QIIKKRN L Q DDEI
Sbjct: 464 ARTPSLKKPKAKDVFKRDMTYNEKKKLSTNLQNLPSEKLDAILQIIKKRNFELLQQDDEI 523
Query: 594 EVDIDSVDAETLWELDRFVTNYKKSLSKNKRKAELA-NQARAVAQQNVQQQTPAPVVTEV 652
EVDIDSVD ETLWELDR V NY+KSLSKNKRKAELA +ARA A++N Q +
Sbjct: 524 EVDIDSVDTETLWELDRLVMNYRKSLSKNKRKAELAILKARAEAERNDQ--------ANL 575
Query: 653 RKEIRTDDRIGSTSSPVQ 670
+E R D+ S+SSP +
Sbjct: 576 LRETRADENTISSSSPTR 593
>gi|449465695|ref|XP_004150563.1| PREDICTED: transcription factor GTE4-like [Cucumis sativus]
Length = 629
Score = 634 bits (1634), Expect = e-179, Method: Compositional matrix adjust.
Identities = 366/678 (53%), Positives = 438/678 (64%), Gaps = 93/678 (13%)
Query: 1 MASGPIVEGNDGANREKQRYSESKVYTRKAFKGPKKQNTNATATAAADNTNAPAAAANNV 60
MAS PI G D R KQR SE KVY RK F+G K QNT
Sbjct: 1 MASAPIAGGEDEG-RIKQRCSEYKVYRRKTFRGVKNQNT--------------------P 39
Query: 61 SAVTTTTATTTTTITTDVTANENNRDENNDVEIDKDGNNGSEGNKNENDATENSKNEYNG 120
S + T +TTTT DKD N +NEN ++N
Sbjct: 40 SVTPSITVSTTTT--------------------DKDPNI-----RNENATIA----KFNN 70
Query: 121 TKSFMNQNNGIENNRNENDNEKSSIPEQPTQTLTVADTNLDQQPVVSHLDAASDDSSSLN 180
K F N ++ +E E + +QP Q DAAS+D L
Sbjct: 71 VKDFNNNSDQAVPRSSEASEEANLYQQQPLQ------------------DAASEDDD-LT 111
Query: 181 RQQGGVVVAATTREA----PSENGVVAVKSG-DGRVKISLGSSTKREMREIRKKLEIELD 235
R G V V EA PS NG V +KSG D ++ S K+EM+E+R+K E EL+
Sbjct: 112 RLDGQVSVGPAVEEANQDLPSVNGGV-IKSGFDDHNRVDSASKPKQEMQELRRKFESELE 170
Query: 236 TVRSLVKRIEAKEVQISGGVSNSGV--LPVSDVVDNGIKRGHSEVASVGVPVTRVGITRP 293
VR+LVKRIEA + Q++ G ++S V + +SD G HSEV SVGVP T
Sbjct: 171 VVRNLVKRIEAIQGQLNSGHTHSHVSTMEISDNC-RGAYPVHSEVGSVGVP------TEN 223
Query: 294 SRPLNQLSISTVENSLGLSENVEKEKRTPKANQFYRNSEFLLAKDKFPPAESNKKSKLNG 353
SR L QLS+S +EN G+ + +E+EKRTPKANQFYR+SEFLLAKD+ PPAESNKKSKLNG
Sbjct: 224 SRALRQLSLSVMENGKGVHDFMEREKRTPKANQFYRDSEFLLAKDRIPPAESNKKSKLNG 283
Query: 354 KKQAGNELAHGFGTGSKIFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPM 413
KK++ + +GFG G+KIF +C +LLEKLMKHKHGWVFN PVDV+ L LHDYF+IIRHPM
Sbjct: 284 KKRSRQKFNYGFGMGTKIFNACVSLLEKLMKHKHGWVFNTPVDVEGLCLHDYFSIIRHPM 343
Query: 414 DLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIE 473
DLGTVKTRLNKNWYKSPKEFAEDVRLTF NAMTYNPKGQDVHIMAEQLLKIFED+WVVIE
Sbjct: 344 DLGTVKTRLNKNWYKSPKEFAEDVRLTFQNAMTYNPKGQDVHIMAEQLLKIFEDRWVVIE 403
Query: 474 SEYNREMRIGADYEMGFHTPTSRKAPPLPPPLDMRRILDRSESITHPMDSRLKPISTTPS 533
S Y +EMR+G +Y + S + P P PLDMR+IL RS+S+ +P DSR +P+S TPS
Sbjct: 404 SNYYQEMRLGMEYGAPLPSSNSVRGHPRPVPLDMRKILRRSDSLINPADSRTQPMSVTPS 463
Query: 534 SRTPAPKKPKAKDPHKRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEI 593
+RTP+ KKPKAKD KRDMTY+EK+KLSTNLQ+LPSEKLD I+QIIKKRN L Q DDEI
Sbjct: 464 ARTPSLKKPKAKDVFKRDMTYNEKKKLSTNLQNLPSEKLDAILQIIKKRNFELLQQDDEI 523
Query: 594 EVDIDSVDAETLWELDRFVTNYKKSLSKNKRKAELA-NQARAVAQQNVQQQTPAPVVTEV 652
EVDIDSVD ETLWELDR V NY+KSLSKNKRKAELA +ARA A++N Q +
Sbjct: 524 EVDIDSVDTETLWELDRLVMNYRKSLSKNKRKAELAILKARAEAERNDQ--------ANL 575
Query: 653 RKEIRTDDRIGSTSSPVQ 670
+E R D+ S+SSP +
Sbjct: 576 LRETRADENTISSSSPTR 593
>gi|302143389|emb|CBI21950.3| unnamed protein product [Vitis vinifera]
Length = 612
Score = 608 bits (1569), Expect = e-171, Method: Compositional matrix adjust.
Identities = 331/546 (60%), Positives = 401/546 (73%), Gaps = 48/546 (8%)
Query: 138 NDNEKSSIPEQPTQTLTVADTNLDQQPV-VSHLDAASDDSSSLNRQQGGVVVAATTREAP 196
N+++ +S P+QP Q + N QQP ++ A SDDSSSL+R + ++ P
Sbjct: 70 NNSDNNSTPQQPVQAVASEHANSSQQPREINAETAVSDDSSSLSRAH--LAEPSSIEAPP 127
Query: 197 SENGVVAVKSG----DGRVKISLGSSTKREMREIRKKLEIELDTVRSLVKRIEAKEVQIS 252
+ NG AVK G + R+KI+L + +K+E RE+R+KL+ ELD VRSLVK+IEAK+V S
Sbjct: 128 AGNG--AVKPGISRLENRIKINLATRSKQETRELRRKLQTELDLVRSLVKKIEAKDVLGS 185
Query: 253 GGVSNSGVLPVSDVVDNGI-KRGHSEVASVGVPVTRVGITRPSRPLNQLSISTVENSLGL 311
G VVD+ + KR SEVAS SRPL+QLSIS +ENS G
Sbjct: 186 EG----------GVVDDSVAKRVSSEVASAKS-------LSQSRPLHQLSISVIENSQGG 228
Query: 312 SENVEKEKRTPKANQFYRNSEFLLAKDKFPPAESNKKSKLNGKKQAGNELAHGFGTGSKI 371
S+ VEKEKRTPKANQFYRNSEFLL K+KFP ESNKK+KLNGKK G E +G +K
Sbjct: 229 SDVVEKEKRTPKANQFYRNSEFLLGKEKFP-TESNKKTKLNGKKHGGVEPGYGSAM-NKC 286
Query: 372 FKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPK 431
FK+C ALLE+LMKHKHGWVFN+PVDVK LGLHDYF+II PMDLGTVK+RLNKNWYKSP+
Sbjct: 287 FKNCGALLERLMKHKHGWVFNSPVDVKGLGLHDYFSIITDPMDLGTVKSRLNKNWYKSPR 346
Query: 432 EFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEMGFH 491
EFAEDVRLTFHNAMTYNPKGQDVH+MAE L KIFEDKW VIE+E ++ A
Sbjct: 347 EFAEDVRLTFHNAMTYNPKGQDVHVMAEVLSKIFEDKWAVIEAE-----KLPA------- 394
Query: 492 TPTSRKAPPLPPPLDMRRILDRSESITHPMDSRLKPISTTPSSRTPAPKKPKAKDPHKRD 551
PP+ P +MRR+LDRSES+T+ +D ++KP++ TP RTP+ KKPKAKDP+KRD
Sbjct: 395 ------PPPMLPSHEMRRVLDRSESMTYAVDPKIKPMNYTPLVRTPSLKKPKAKDPNKRD 448
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWELDRF 611
MT++EKQKLSTNLQ+LPSEKLDNIV IIK+ NS+L Q +DEIEVDIDSVDAETLWELDR+
Sbjct: 449 MTFEEKQKLSTNLQNLPSEKLDNIVHIIKRNNSALCQDNDEIEVDIDSVDAETLWELDRY 508
Query: 612 VTNYKKSLSKNKRKAELANQARAVAQQNVQQQTPAPVVTEVRKEIRTDDRIGSTSSPVQV 671
VTNYKKSLSKNKRKAELA QARA A + +Q++ P PVVTE +E D+R S+SSPVQ
Sbjct: 509 VTNYKKSLSKNKRKAELA-QARAEAARKIQERNPVPVVTEAARETNIDERNISSSSPVQG 567
Query: 672 EKQVDN 677
EKQ +N
Sbjct: 568 EKQGEN 573
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/39 (69%), Positives = 31/39 (79%), Gaps = 4/39 (10%)
Query: 1 MASGPIVEGNDGA----NREKQRYSESKVYTRKAFKGPK 35
MASGPIV+G G +REK+R+ ESKVYTRKAFKGPK
Sbjct: 1 MASGPIVDGGGGGGGDGSREKKRWQESKVYTRKAFKGPK 39
>gi|357474555|ref|XP_003607562.1| Bromodomain-containing factor [Medicago truncatula]
gi|355508617|gb|AES89759.1| Bromodomain-containing factor [Medicago truncatula]
Length = 980
Score = 544 bits (1402), Expect = e-152, Method: Compositional matrix adjust.
Identities = 281/448 (62%), Positives = 319/448 (71%), Gaps = 42/448 (9%)
Query: 210 RVKISLGSSTKREMREIRKKLEIELDTVRSLVKRIEAKEVQISGGVSNSGVLPVSDVVDN 269
R+KI+L S++K+E +E+ KLE ELD VRSLVKRIE K+ + G +++ VL
Sbjct: 500 RIKINLASTSKQEKQEMCLKLESELDAVRSLVKRIEVKQGYVGGYGNSNVVLGGGITNGG 559
Query: 270 GIKRGHSEVASVGVPVTRVGITRPSRPLNQLSISTVENSLGLSENVEKEKRTPKANQFYR 329
G +R HSE SVGV +P+RPL+QLS +NS SE VEKEKR PKANQFY
Sbjct: 560 GAQRAHSEAGSVGVS------RQPTRPLHQLSFPMFQNSRRASEGVEKEKRMPKANQFYH 613
Query: 330 NSEFLLAKDKFPPAESNKKSKLNGKKQAGNELAHGFGTGSKIFKSCSALLEKLMKHKHGW 389
NSEFLLA DKFPPAESNKKSKLN KKQ G ++ G GSK FKSCS+LLEKLMKH++ W
Sbjct: 614 NSEFLLANDKFPPAESNKKSKLNWKKQGGGDMGLGLQMGSKFFKSCSSLLEKLMKHQYAW 673
Query: 390 VFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNP 449
VFN PVDV LGLHDYFTII +PMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNP
Sbjct: 674 VFNTPVDVDGLGLHDYFTIITNPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNP 733
Query: 450 KGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEMGFHTPTSRKAPPL--PPPLDM 507
KGQDVH MAEQL KIFED+W +IES+YNREMR G DY G +P SR+ P PPPLDM
Sbjct: 734 KGQDVHAMAEQLSKIFEDRWAIIESDYNREMRYGMDY--GAPSPLSRRVPAFTPPPPLDM 791
Query: 508 RRILDRSESITHPMDSRLKPISTTPSSRTPAPKKPKAKDPHKRDMTYDEKQKLSTNLQSL 567
RRILDR E P + ++ TPSSRTPAPKKPKAKDP+KRDMTYDEKQKLSTN
Sbjct: 792 RRILDRQE----PFARTPRSMNNTPSSRTPAPKKPKAKDPNKRDMTYDEKQKLSTN---- 843
Query: 568 PSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWELDRFVTNYKKSLSKNKRKAE 627
DEIEVD D+VDAE LWELDRFV NYKKSLSKNKRKAE
Sbjct: 844 -----------------------DEIEVDFDAVDAEILWELDRFVLNYKKSLSKNKRKAE 880
Query: 628 LANQARAVAQQNVQQQTPAPVVTEVRKE 655
A + RA A QN Q + P ++ +E
Sbjct: 881 QARE-RAEALQNSVQSSQPPATAQIPRE 907
Score = 40.0 bits (92), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 67/163 (41%), Gaps = 31/163 (19%)
Query: 11 DGANREKQRYSESKVYTRKAFKGPKKQNTNATATAAADNTNAPAAAANNVSAVTTTTATT 70
DG RE QRYSE KVY RK FKG K N N T D N P
Sbjct: 7 DGV-REIQRYSEGKVYRRKVFKG-IKINPNIEETVLKDE-NIP----------------- 46
Query: 71 TTTITTDVTANEN-----NRDENNDVEIDKDGNNG-SEGNKNENDAT--ENSKNEYNGTK 122
TTI T T N N N DE + + DGN +EG+ D + + + N +
Sbjct: 47 -TTIVTSDTDNNNGTTLENIDEAPEFAVLGDGNLAKAEGSSRLEDGSSIQQQLGDQNLVE 105
Query: 123 SFMNQNNGIENNRNENDNEKSSIPEQPTQTLTVADTNLDQQPV 165
+ G N+ + E +S QP + +AD N QQ V
Sbjct: 106 EHASSRTGDRNSPQQQLEELNSA--QPHASFQLADGNSPQQKV 146
>gi|225461616|ref|XP_002283002.1| PREDICTED: transcription factor GTE4-like [Vitis vinifera]
Length = 597
Score = 535 bits (1379), Expect = e-149, Method: Compositional matrix adjust.
Identities = 334/602 (55%), Positives = 407/602 (67%), Gaps = 48/602 (7%)
Query: 126 NQNNGIENNRNENDNEKSSIPEQPTQTL--TVADTNLDQQPVVSHLDAASDDSSSLNRQQ 183
N N GI+ N + +++ +Q +QTL T D N Q +S DAASDDSSS
Sbjct: 30 NHNKGIKINNESS-IINNNVAQQSSQTLATTTEDANSLQPQALSRFDAASDDSSS----- 83
Query: 184 GGVVVAATTREAPSENGVVAVKSGDGRVKI-SLGSSTKREMREIRKKLEIELDTVRSLVK 242
A RE + NGV +++ S+ +K E R++R+KL ELD VRSL K
Sbjct: 84 -HTPPAENGRENMNGNGVKPEDPNVEKIRFRSISMRSKVEKRDLRRKLLGELDQVRSLAK 142
Query: 243 RIEAKEVQISGGVSNSGVLPVSDVVD--NGIKRGHSEVASVGVPVTRVGITRPSRPLNQL 300
+++ + Q+SG + + +D +D G R +SEV SVGV + SRP L
Sbjct: 143 KLDTNDGQLSGYAHSQ--VSGNDGLDRGGGALRVNSEVGSVGV--------QDSRPFRGL 192
Query: 301 SISTVENSLGLSENVEKEKRTPKANQFYRNSEFLLAKDKFPPAESNKKSKLNGKKQAGNE 360
S+S + NS G+ E VEKEKRTPKAN++Y+N +F+L KDK PP ESNKK K NG
Sbjct: 193 SVSVMGNSHGIGEFVEKEKRTPKANKYYQNPDFVLGKDKLPPPESNKKPKSNG------- 245
Query: 361 LAHGFGTGSKI---FKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGT 417
G + FK+CS LL KLMKHKHGWVFN PVDVK LGLHDY++II+HPMD GT
Sbjct: 246 ----VGIDKYVAQAFKNCSNLLAKLMKHKHGWVFNNPVDVKGLGLHDYYSIIKHPMDFGT 301
Query: 418 VKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYN 477
VK+RL+KNWYKSP+EFAEDVRLT NAMTYNPKGQDVH MAE+LLKIFE+KW IE++
Sbjct: 302 VKSRLSKNWYKSPREFAEDVRLTLQNAMTYNPKGQDVHCMAEELLKIFEEKWAAIEADL- 360
Query: 478 REMRIGADYEMGFHTPTSRKAPPL----PPPLDMRRILDRSESITHPMDSRLKPISTTPS 533
R G ++ G TPTSRKAP L P + R +DRS S+ P+DS LKP
Sbjct: 361 -YWRFGMGHDAGTPTPTSRKAPYLHHHHSPEM---RTVDRSGSMAMPIDSNLKP-GNFAH 415
Query: 534 SRTPAPKKPKAKDPHKRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEI 593
R P PKKPKAKDPHKRDMTY+EKQKLS+NLQSLPSEKLD+IVQIIKKRNS++ Q DDEI
Sbjct: 416 MRMPVPKKPKAKDPHKRDMTYEEKQKLSSNLQSLPSEKLDHIVQIIKKRNSAVSQQDDEI 475
Query: 594 EVDIDSVDAETLWELDRFVTNYKKSLSKNKRKAELANQARAVAQQNVQQQTPAPVVTEVR 653
EVDIDSVDAETLWELDR+VTNYKKSLSKNKRKAELA QARA + N+Q+ +
Sbjct: 476 EVDIDSVDAETLWELDRYVTNYKKSLSKNKRKAELAFQARANSDHNIQEMYSSSATAGAP 535
Query: 654 KEIRTDDRIGSTSSPVQVEKQVDNGSRSSSSSSSSSDSGSSSSDSDSETSSS-GSEGGNS 712
KE ++D S +SP+Q EKQ DN SSSSSSSSDSGSSSSDSDSE+SS+ GS+ G+S
Sbjct: 536 KETKSDGEHVS-ASPIQAEKQGDNAGGGSSSSSSSSDSGSSSSDSDSESSSAYGSDAGHS 594
Query: 713 PR 714
P+
Sbjct: 595 PK 596
>gi|15221424|ref|NP_172113.1| global transcription factor group E4 [Arabidopsis thaliana]
gi|30679613|ref|NP_849601.1| global transcription factor group E4 [Arabidopsis thaliana]
gi|334182337|ref|NP_001184922.1| global transcription factor group E4 [Arabidopsis thaliana]
gi|75174943|sp|Q9LNC4.1|GTE4_ARATH RecName: Full=Transcription factor GTE4; AltName:
Full=Bromodomain-containing protein GTE4; AltName:
Full=Protein GLOBAL TRANSCRIPTION FACTOR GROUP E4
gi|8844128|gb|AAF80220.1|AC025290_9 Contains similarity to a Ring3 protein from Homo sapiens gi|133157
and contains a bromodomain PF|00439. EST gb|F14211 comes
from this gene [Arabidopsis thaliana]
gi|332189843|gb|AEE27964.1| global transcription factor group E4 [Arabidopsis thaliana]
gi|332189844|gb|AEE27965.1| global transcription factor group E4 [Arabidopsis thaliana]
gi|332189845|gb|AEE27966.1| global transcription factor group E4 [Arabidopsis thaliana]
Length = 766
Score = 529 bits (1362), Expect = e-147, Method: Compositional matrix adjust.
Identities = 309/554 (55%), Positives = 391/554 (70%), Gaps = 33/554 (5%)
Query: 147 EQPTQTLTVADTN---LDQQP--VVSHLDAASDDSSSLNRQ--------------QGGVV 187
E P+QTL++ D + +D+ P V S D D+ +L ++ Q
Sbjct: 185 EAPSQTLSLEDGDTLVVDKNPIEVSSEEDVHVIDADNLIKEAHPENFVERDTTDAQQPAG 244
Query: 188 VAATTREAPSENGVVAVKSGDGRVKISLGSSTKREMREIRKKLEIELDTVRSLVKRIEAK 247
+ + + A + + + DGR++I + S+TK++ EIRKKLE +L+ VR +VK+IE K
Sbjct: 245 LTSDSAHATAAGSMPMEEDADGRIRIHVASTTKQQKEEIRKKLEDQLNVVRGMVKKIEDK 304
Query: 248 EVQISGGVSNSGVLPVSDVVDNGIKRGHSEVASVGVPVTRVGITRPSRPLNQLSISTVEN 307
E +I G ++S VL ++ ++NG R S AS G+P + R RP+NQLSIS +EN
Sbjct: 305 EGEI-GAYNDSRVL-INTGINNGGGRILSGFASAGLPRE---VIRAPRPVNQLSISVLEN 359
Query: 308 SLGLSENVEKEKRTPKANQFYRNSEFLLAKDKFPPAESNKKSKLNGKKQAGNELAHGFGT 367
+ G++E+VEKEKRTPKANQFYRNSEFLL DK PPAESNKKSK + KKQ G+ + HGFG
Sbjct: 360 TQGVNEHVEKEKRTPKANQFYRNSEFLLG-DKLPPAESNKKSKSSSKKQGGD-VGHGFGA 417
Query: 368 GSKIFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWY 427
G+K+FK+CSALLE+LMKHKHGWVFNAPVDVK LGL DY+TII HPMDLGT+K+ L KN Y
Sbjct: 418 GTKVFKNCSALLERLMKHKHGWVFNAPVDVKGLGLLDYYTIIEHPMDLGTIKSALMKNLY 477
Query: 428 KSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYE 487
KSP+EFAEDVRLTFHNAMTYNP+GQDVH+MA LL+IFE++W VIE++YNREMR YE
Sbjct: 478 KSPREFAEDVRLTFHNAMTYNPEGQDVHLMAVTLLQIFEERWAVIEADYNREMRFVTGYE 537
Query: 488 MGFHTPT--SRKAPPL-PPPLDMRRILDRSE--SITHPMDSRLKPISTTPSSRTPAPKKP 542
M TPT SR P + PPP+++R +DR++ + P S TPS RTPA KKP
Sbjct: 538 MNLPTPTMRSRLGPTMPPPPINVRNTIDRADWSNRQPTTTPGRTPTSATPSGRTPALKKP 597
Query: 543 KAKDPHKRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDA 602
KA +P+KRDMTY+EKQKLS +LQ+LP +KLD IVQI+ KRN+++ D+EIEVDIDSVD
Sbjct: 598 KANEPNKRDMTYEEKQKLSGHLQNLPPDKLDAIVQIVNKRNTAVKLRDEEIEVDIDSVDP 657
Query: 603 ETLWELDRFVTNYKKSLSKNKRKAELANQARAVAQQNVQQQ-TPAPVVTEVRKE-IRTDD 660
ETLWELDRFVTNYKK LSK KRKAELA QARA A++N QQQ PAP E +E T
Sbjct: 658 ETLWELDRFVTNYKKGLSKKKRKAELAIQARAEAERNSQQQMAPAPAAHEFSREGGNTAK 717
Query: 661 RIGSTSSPVQVEKQ 674
+ T P QVEKQ
Sbjct: 718 KTLPTPLPSQVEKQ 731
>gi|297843426|ref|XP_002889594.1| DNA-binding bromodomain-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335436|gb|EFH65853.1| DNA-binding bromodomain-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 767
Score = 523 bits (1347), Expect = e-145, Method: Compositional matrix adjust.
Identities = 317/565 (56%), Positives = 396/565 (70%), Gaps = 35/565 (6%)
Query: 147 EQPTQTLTVADTN---LDQQP--VVSHLDAASDDSSSL---------------NRQQGGV 186
E P+QTL+V D N +D+ P V S D D+ +L + QQ
Sbjct: 185 EAPSQTLSVEDGNTLVVDKNPIEVSSEEDVHVVDADNLIKEAHPENFVERDATDAQQPAG 244
Query: 187 VVAATTREAPSENGVVAVKSGDGRVKISLGSSTKREMREIRKKLEIELDTVRSLVKRIEA 246
+ + + R A + + + DGR++I + S+TK++ EIRKKLE +L VR +VK+IE
Sbjct: 245 LTSDSAR-ATAAGSMPMEEDADGRIRIHVASTTKQQKEEIRKKLEDQLSVVRGMVKKIED 303
Query: 247 KEVQISGGVSNSGVLPVSDVVDNGIKRGHSEVASVGVPVTRVGITRPSRPLNQLSISTVE 306
KE +I G ++S VL ++ ++NG R S AS G+P + R RP+NQLSIS +E
Sbjct: 304 KEGEI-GAYNDSRVL-INTGINNGGGRILSGFASAGLPRE---VIRAPRPVNQLSISVLE 358
Query: 307 NSLGLSENVEKEKRTPKANQFYRNSEFLLAKDKFPPAESNKKSKLNGKKQAGNELAHGFG 366
N+ G++E+VEKEKRTPKANQFYR SEFLL DK PPAESNKKSK + KKQ G+ + HGFG
Sbjct: 359 NTQGVNEHVEKEKRTPKANQFYRTSEFLLG-DKLPPAESNKKSKSSSKKQGGD-VGHGFG 416
Query: 367 TGSKIFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNW 426
GSK+FK+CSALLE+LMKHKHGWVFNAPVDVK LGL DY+TII HPMDLGT+K+ L KN
Sbjct: 417 AGSKVFKNCSALLERLMKHKHGWVFNAPVDVKGLGLLDYYTIIEHPMDLGTIKSALMKNL 476
Query: 427 YKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADY 486
YKSP+EFAEDVRLTFHNAMTYNP+GQDVH+MA LL+IFE++W VIE++YNREMR Y
Sbjct: 477 YKSPREFAEDVRLTFHNAMTYNPEGQDVHLMAVTLLQIFEERWAVIEADYNREMRFVTGY 536
Query: 487 EMGF--HTPTSRKAPPLPPP-LDMRRILDRSE--SITHPMDSRLKPISTTPSSRTPAPKK 541
EM HT SR P +PPP +++R +DR++ + P S TPS RTPA KK
Sbjct: 537 EMNLPTHTMRSRLGPTMPPPPINVRNTIDRADWSNRQPTTTPGSTPTSATPSGRTPALKK 596
Query: 542 PKAKDPHKRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVD 601
PKA +P+KRDMTY+EKQKLS +LQ+LP +KLD IVQI+ KRN+++ D+EIEVDIDSVD
Sbjct: 597 PKANEPNKRDMTYEEKQKLSGHLQNLPPDKLDAIVQIVNKRNTAVKLRDEEIEVDIDSVD 656
Query: 602 AETLWELDRFVTNYKKSLSKNKRKAELANQARAVAQQNVQQQ-TPAPVVTEVRKEI-RTD 659
ETLWELDRFVTNYKK LSK KRKAELA QARA A++N QQQ PA V E +E T
Sbjct: 657 PETLWELDRFVTNYKKGLSKKKRKAELAIQARAEAERNSQQQMAPALVAHEFSREGGNTA 716
Query: 660 DRIGSTSSPVQVEKQVDNGSRSSSS 684
+ T P Q+EKQ + SRSSSS
Sbjct: 717 KKTLPTPLPSQMEKQNNETSRSSSS 741
>gi|224146489|ref|XP_002326024.1| global transcription factor group [Populus trichocarpa]
gi|222862899|gb|EEF00406.1| global transcription factor group [Populus trichocarpa]
Length = 393
Score = 502 bits (1293), Expect = e-139, Method: Compositional matrix adjust.
Identities = 253/345 (73%), Positives = 275/345 (79%), Gaps = 15/345 (4%)
Query: 335 LAKDKFPPAESNKKSKLNGKKQAGNELAHGFGTGSKIFKSCSALLEKLMKHKHGWVFNAP 394
L +KFPPAESNKKSKLNGKKQ E GFGTG+KIFK+CSALL+KLMKHKHGWVFN P
Sbjct: 39 LQLNKFPPAESNKKSKLNGKKQGAGESGFGFGTGTKIFKNCSALLDKLMKHKHGWVFNTP 98
Query: 395 VDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDV 454
VDVK LGLHDYF II+HPMDLGTVK+RL KNWYKSP+EFAEDVRLTFHNAM YNPKGQDV
Sbjct: 99 VDVKGLGLHDYFIIIKHPMDLGTVKSRLTKNWYKSPEEFAEDVRLTFHNAMKYNPKGQDV 158
Query: 455 HIMAEQLLKIFEDKWVVIESEYNREMRIGADYEMGFHTPTSRKAPPL-PPPLDMRRILDR 513
H+MAEQLL IFE KW VI+S+Y+ EMR + YE+G TPTSRKAPP PPPLDM RILDR
Sbjct: 159 HVMAEQLLDIFETKWAVIKSDYDHEMRFSSSYEVGIPTPTSRKAPPFVPPPLDMWRILDR 218
Query: 514 SESITHPMDSRLKPISTTPSSRTPAPKKPKAKDPHKRDMTYDEKQKLSTNLQSLPSEKLD 573
SES+T+ PI TP P P AKDP+KRDMTYDEKQKLSTNLQSLPSEKLD
Sbjct: 219 SESMTY-------PIIDTPDP-NPLPLHLLAKDPNKRDMTYDEKQKLSTNLQSLPSEKLD 270
Query: 574 NIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWELDRFVTNYKKSLSKNKRKAELANQAR 633
NIVQIIKKR+S+L QHDDEIEVDIDSVD ETLWELDRFVTNYKKSLSKNKRKAELA QAR
Sbjct: 271 NIVQIIKKRSSALSQHDDEIEVDIDSVDVETLWELDRFVTNYKKSLSKNKRKAELAIQAR 330
Query: 634 AVAQQNVQQQT-PAPVVTEVRKEIRTDDRIGSTSSPVQVEKQVDN 677
A +Q NVQ + P ++ E R ST SP VEK DN
Sbjct: 331 ADSQLNVQHKVKPLTKFLSIKYE-----RNVSTLSPNHVEKLGDN 370
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/41 (65%), Positives = 35/41 (85%)
Query: 211 VKISLGSSTKREMREIRKKLEIELDTVRSLVKRIEAKEVQI 251
VK+ L S +K+E RE+RKKLE EL+ VRSLVK+IEAKE+Q+
Sbjct: 1 VKVDLLSQSKQEKRELRKKLESELELVRSLVKKIEAKELQL 41
>gi|302142921|emb|CBI20216.3| unnamed protein product [Vitis vinifera]
Length = 467
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 238/354 (67%), Positives = 276/354 (77%), Gaps = 12/354 (3%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN 425
G ++ FK+CS LL KLMKHKHGWVFN PVDVK LGLHDY++II+HPMD GTVK+RL+KN
Sbjct: 120 GYVAQAFKNCSNLLAKLMKHKHGWVFNNPVDVKGLGLHDYYSIIKHPMDFGTVKSRLSKN 179
Query: 426 WYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGAD 485
WYKSP+EFAEDVRLT NAMTYNPKGQDVH MAE+LLKIFE+KW IE++ R G
Sbjct: 180 WYKSPREFAEDVRLTLQNAMTYNPKGQDVHCMAEELLKIFEEKWAAIEADLY--WRFGMG 237
Query: 486 YEMGFHTPTSRKAPPL----PPPLDMRRILDRSESITHPMDSRLKPISTTPSSRTPAPKK 541
++ G TPTSRKAP L P + R +DRS S+ P+DS LKP R P PKK
Sbjct: 238 HDAGTPTPTSRKAPYLHHHHSPEM---RTVDRSGSMAMPIDSNLKP-GNFAHMRMPVPKK 293
Query: 542 PKAKDPHKRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVD 601
PKAKDPHKRDMTY+EKQKLS+NLQSLPSEKLD+IVQIIKKRNS++ Q DDEIEVDIDSVD
Sbjct: 294 PKAKDPHKRDMTYEEKQKLSSNLQSLPSEKLDHIVQIIKKRNSAVSQQDDEIEVDIDSVD 353
Query: 602 AETLWELDRFVTNYKKSLSKNKRKAELANQARAVAQQNVQQQTPAPVVTEVRKEIRTDDR 661
AETLWELDR+VTNYKKSLSKNKRKAELA QARA + N+Q+ + KE ++D
Sbjct: 354 AETLWELDRYVTNYKKSLSKNKRKAELAFQARANSDHNIQEMYSSSATAGAPKETKSDGE 413
Query: 662 IGSTSSPVQVEKQVDNGSRSSSSSSSSSDSGSSSSDSDSETSSS-GSEGGNSPR 714
S +SP+Q EKQ DN SSSSSSSSDSGSSSSDSDSE+SS+ GS+ G+SP+
Sbjct: 414 HVS-ASPIQAEKQGDNAGGGSSSSSSSSDSGSSSSDSDSESSSAYGSDAGHSPK 466
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 43/72 (59%), Gaps = 4/72 (5%)
Query: 214 SLGSSTKREMREIRKKLEIELDTVRSLVKRIEAKEVQISGGVSNSGVLPVSDVVD--NGI 271
S+ +K E R++R+KL ELD VRSL K+++ + Q+SG + + +D +D G
Sbjct: 52 SISMRSKVEKRDLRRKLLGELDQVRSLAKKLDTNDGQLSGYAHSQ--VSGNDGLDRGGGA 109
Query: 272 KRGHSEVASVGV 283
R +SEV SVG
Sbjct: 110 LRVNSEVGSVGY 121
>gi|242061170|ref|XP_002451874.1| hypothetical protein SORBIDRAFT_04g009060 [Sorghum bicolor]
gi|241931705|gb|EES04850.1| hypothetical protein SORBIDRAFT_04g009060 [Sorghum bicolor]
Length = 654
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 226/427 (52%), Positives = 277/427 (64%), Gaps = 39/427 (9%)
Query: 233 ELDTVRSLVKRI-EAKEVQISGGVSNSGVLPV------SDVVDNGIKRGHSEVASVGVPV 285
ELD VR L KR+ EA E S LP+ VV+ G + H + VP+
Sbjct: 208 ELDQVRVLSKRLKEAAEALAQREASEPAPLPLMVLPTQQQVVEAGYVQPHFSAGDMAVPM 267
Query: 286 TR--VGITRPSRPLNQ---LSISTVENSLGLSENVEKEKRTPKANQFYRNSEFLLAKDKF 340
+ P R L Q L++S + N E EKEKRTPKANQ Y+NSEFLLAKD+
Sbjct: 268 SAQVAAAVTPGRTLLQRRPLTVSVIHN-----EAFEKEKRTPKANQLYQNSEFLLAKDRI 322
Query: 341 PPAESNKKSKLNGKKQAGNEL---AHGFGTGSKI----FKSCSALLEKLMKHKHGWVFNA 393
PPA+S+ + K K+ L F ++ FK S+LL +LMKHK GWVFN
Sbjct: 323 PPADSHGRKKSKHHKKKHRSLESRGADFDAERRLYSHAFKKSSSLLSRLMKHKFGWVFNK 382
Query: 394 PVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQD 453
PVD LGLHDYFTII+HPMDLGT++ RL+ Y++PKEFAEDVRLTFHNAMTYNPKGQD
Sbjct: 383 PVDPVALGLHDYFTIIKHPMDLGTIRGRLSHGQYRNPKEFAEDVRLTFHNAMTYNPKGQD 442
Query: 454 VHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEMGFHTPTSRKAPPLPPPLDMRRILDR 513
VH MAEQL IFE +W IE+E N + PPP+D+ R L+R
Sbjct: 443 VHFMAEQLSGIFEAQWPEIEAEVNY-----------LASCPPLPKKFPPPPIDL-RFLER 490
Query: 514 SESITHPM--DSRLKPISTTPS-SRTPAPKKPKAKDPHKRDMTYDEKQKLSTNLQSLPSE 570
S+S+ H M D+ +PIS TP+ +RTP+ KKP+AKDP+KRDMT DEK+KLS NLQ+LP E
Sbjct: 491 SDSMRHHMALDTNSRPISHTPTYTRTPSMKKPRAKDPNKRDMTIDEKRKLSENLQNLPPE 550
Query: 571 KLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWELDRFVTNYKKSLSKNKRKAELAN 630
KLD +VQ+IK +N S+ QHDDEIEV+IDS+DAETLWELDRFV NYKK+LSK KRKAE A
Sbjct: 551 KLDAVVQVIKNKNLSVMQHDDEIEVEIDSMDAETLWELDRFVANYKKNLSKQKRKAERAM 610
Query: 631 QARAVAQ 637
AR A+
Sbjct: 611 LARQDAE 617
>gi|413925979|gb|AFW65911.1| hypothetical protein ZEAMMB73_814222 [Zea mays]
gi|413925980|gb|AFW65912.1| hypothetical protein ZEAMMB73_814222 [Zea mays]
Length = 665
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 240/494 (48%), Positives = 307/494 (62%), Gaps = 61/494 (12%)
Query: 171 AASDDSSSLNRQQGGVVVAATTREAPSENGVVAVKSGDGRVKISLGSSTK---REMR-EI 226
A+ D SS LNR GG+ NG GD R + + K R +R E+
Sbjct: 117 ASGDPSSGLNRVGGGI-----------PNG-----HGDDRAAAAAVKAEKARKRRLRSEL 160
Query: 227 RKKLEIELDTVRSLVKRIEAKEVQISGGVSNSGV-LPV------SDVVDNGIKRGHSEVA 279
R+ L ELD VR L +R++ ++ ++ V LP+ VVD G + H +A
Sbjct: 161 RRCLAGELDQVRVLSRRLKEAAEALAQQEASEPVPLPLMVLPTQQQVVDAGYVQ-HQFLA 219
Query: 280 ---SVGVPVTRVGITRPSRPL---NQLSISTVENSLGLSENVEKEKRTPKANQFYRNSEF 333
+V +P P+R L L++S V N E EKEKRTPKANQ Y+NSEF
Sbjct: 220 GDMAVPMPTQIAAAVTPARSLLHRRPLTVSVVHN-----EAFEKEKRTPKANQLYQNSEF 274
Query: 334 LLAKDKFPPAESNKKSKLNGKKQAGNEL---AHGFGTGSKI----FKSCSALLEKLMKHK 386
LLAKD+ PP++S+ + K K+ L F ++ FK S+LL +LMKHK
Sbjct: 275 LLAKDRIPPSDSHVRKKPKHHKKKHRSLESRGADFDAERRLYSHAFKKSSSLLSRLMKHK 334
Query: 387 HGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMT 446
GWVFN PVD LGLHDYFTII+HPMDLGT++ RL++ Y++PKEFAEDVRLTFHNAMT
Sbjct: 335 FGWVFNKPVDPVTLGLHDYFTIIKHPMDLGTIRGRLSRGQYRNPKEFAEDVRLTFHNAMT 394
Query: 447 YNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEMGFHTPTSRKAPPLPPPLD 506
YNPKGQDVH MAEQLL IFE +W IE+E N + P+D
Sbjct: 395 YNPKGQDVHFMAEQLLGIFEAQWPEIEAEVNYLASCPPLPKKFPPP-----------PID 443
Query: 507 MRRILDRSESITH--PMDSRLKPISTTPS-SRTPAPKKPKAKDPHKRDMTYDEKQKLSTN 563
+ R L+RS+S+ H +D+ +PIS TP+ +RTP+ KKP+AKDP+KRDMT DEK+KLS N
Sbjct: 444 L-RFLERSDSMRHHVALDTNSRPISHTPTYTRTPSMKKPRAKDPNKRDMTIDEKRKLSEN 502
Query: 564 LQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWELDRFVTNYKKSLSKNK 623
LQ+LP KLD +VQ+IK +N S+ QHDDEIEV+IDS+DAETLWELDRFV+NYKK+LSK K
Sbjct: 503 LQNLPPVKLDAVVQVIKNKNLSVKQHDDEIEVEIDSMDAETLWELDRFVSNYKKNLSKQK 562
Query: 624 RKAELANQARAVAQ 637
RKAE A AR A+
Sbjct: 563 RKAERAMLARQDAE 576
>gi|413925981|gb|AFW65913.1| hypothetical protein ZEAMMB73_814222 [Zea mays]
Length = 670
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 240/494 (48%), Positives = 307/494 (62%), Gaps = 61/494 (12%)
Query: 171 AASDDSSSLNRQQGGVVVAATTREAPSENGVVAVKSGDGRVKISLGSSTK---REMR-EI 226
A+ D SS LNR GG+ NG GD R + + K R +R E+
Sbjct: 117 ASGDPSSGLNRVGGGI-----------PNG-----HGDDRAAAAAVKAEKARKRRLRSEL 160
Query: 227 RKKLEIELDTVRSLVKRIEAKEVQISGGVSNSGV-LPV------SDVVDNGIKRGHSEVA 279
R+ L ELD VR L +R++ ++ ++ V LP+ VVD G + H +A
Sbjct: 161 RRCLAGELDQVRVLSRRLKEAAEALAQQEASEPVPLPLMVLPTQQQVVDAGYVQ-HQFLA 219
Query: 280 ---SVGVPVTRVGITRPSRPL---NQLSISTVENSLGLSENVEKEKRTPKANQFYRNSEF 333
+V +P P+R L L++S V N E EKEKRTPKANQ Y+NSEF
Sbjct: 220 GDMAVPMPTQIAAAVTPARSLLHRRPLTVSVVHN-----EAFEKEKRTPKANQLYQNSEF 274
Query: 334 LLAKDKFPPAESNKKSKLNGKKQAGNEL---AHGFGTGSKI----FKSCSALLEKLMKHK 386
LLAKD+ PP++S+ + K K+ L F ++ FK S+LL +LMKHK
Sbjct: 275 LLAKDRIPPSDSHVRKKPKHHKKKHRSLESRGADFDAERRLYSHAFKKSSSLLSRLMKHK 334
Query: 387 HGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMT 446
GWVFN PVD LGLHDYFTII+HPMDLGT++ RL++ Y++PKEFAEDVRLTFHNAMT
Sbjct: 335 FGWVFNKPVDPVTLGLHDYFTIIKHPMDLGTIRGRLSRGQYRNPKEFAEDVRLTFHNAMT 394
Query: 447 YNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEMGFHTPTSRKAPPLPPPLD 506
YNPKGQDVH MAEQLL IFE +W IE+E N + P+D
Sbjct: 395 YNPKGQDVHFMAEQLLGIFEAQWPEIEAEVNYLASCPPLPKKFPPP-----------PID 443
Query: 507 MRRILDRSESITH--PMDSRLKPISTTPS-SRTPAPKKPKAKDPHKRDMTYDEKQKLSTN 563
+ R L+RS+S+ H +D+ +PIS TP+ +RTP+ KKP+AKDP+KRDMT DEK+KLS N
Sbjct: 444 L-RFLERSDSMRHHVALDTNSRPISHTPTYTRTPSMKKPRAKDPNKRDMTIDEKRKLSEN 502
Query: 564 LQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWELDRFVTNYKKSLSKNK 623
LQ+LP KLD +VQ+IK +N S+ QHDDEIEV+IDS+DAETLWELDRFV+NYKK+LSK K
Sbjct: 503 LQNLPPVKLDAVVQVIKNKNLSVKQHDDEIEVEIDSMDAETLWELDRFVSNYKKNLSKQK 562
Query: 624 RKAELANQARAVAQ 637
RKAE A AR A+
Sbjct: 563 RKAERAMLARQDAE 576
>gi|255567054|ref|XP_002524509.1| bromodomain-containing protein, putative [Ricinus communis]
gi|223536183|gb|EEF37836.1| bromodomain-containing protein, putative [Ricinus communis]
Length = 553
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 219/451 (48%), Positives = 282/451 (62%), Gaps = 45/451 (9%)
Query: 208 DGRVKISLGSSTKREMREIRKKLEIELDTVRSLVKRIEAKEVQISGGVSNSGVLPVSDVV 267
D +V+ISL +K +RE+++KL ELD VRSL KR+EAKE Q +G G L
Sbjct: 77 DDKVRISLNCGSKSVIRELKRKLVSELDQVRSLKKRLEAKETQFNGSNRTGGTLA----- 131
Query: 268 DNGIKRGHSEVASVGVPVTRVGITRPSRPLNQLSISTVENSLGLSENVEKEKRTPKANQF 327
R +SEV+ VG P SRPL +L+ +T N+ EN++KEK+T K N
Sbjct: 132 -----RVNSEVSYVG-PTN-------SRPLQKLADNTSNNNH--YENLDKEKKTSKVNH- 175
Query: 328 YRNSEFLLAKDKFPPAES-NKKSKLNGKKQAGNELAHGFGTGSKIFKSCSALLEKLMKHK 386
K+K +E+ KK K + + + G E ++FK C LLEKLMKH+
Sbjct: 176 --------KKEKVLGSENIKKKLKTSNEPKKGGEGNIMGRCNREVFKKCEDLLEKLMKHQ 227
Query: 387 HGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMT 446
+GWVFN PVDVK L LHDYF II+HPMDLGTVK+RL KNWYKSPKEFAEDV+LTF+NAM
Sbjct: 228 YGWVFNKPVDVKKLKLHDYFKIIKHPMDLGTVKSRLKKNWYKSPKEFAEDVKLTFNNAMK 287
Query: 447 YNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEMGF--------------HT 492
YN KGQD HIMA+ LLK+FE+ W +IE E+ R+ Y+ G
Sbjct: 288 YNDKGQDAHIMADVLLKLFEEHWAIIEPEFINNERVDMGYDAGLPRPAPNRASAPPAPAP 347
Query: 493 PTSRKAPPLPPPLDMRRILDRSESITHPMDSRLKPIST-TPSSRTPAPKKPKAKDPHKRD 551
+ PL +ILDRSES+T PM+S +K + T R P KKPK DP +R+
Sbjct: 348 SPVLASAPLRKMPSESKILDRSESMTKPMNSSMKAANMATHEGRLPMSKKPKEIDPQRRE 407
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWELDRF 611
MT++EKQ+LS +L +PS+KLD++VQII+KRN L Q DDEIEVDIDS D+ETLWELDR
Sbjct: 408 MTFEEKQRLSADLLDMPSDKLDSVVQIIRKRNPGLCQQDDEIEVDIDSFDSETLWELDRL 467
Query: 612 VTNYKKSLSKNKRKAELANQARAVAQQNVQQ 642
V N+KK L+K+ R AE A QAR A N+++
Sbjct: 468 VNNHKKGLTKDSRIAEPAFQARGEAGHNIEE 498
>gi|125581496|gb|EAZ22427.1| hypothetical protein OsJ_06088 [Oryza sativa Japonica Group]
Length = 656
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 250/491 (50%), Positives = 305/491 (62%), Gaps = 47/491 (9%)
Query: 172 ASDDSSSLNRQQGGVVVAATTREAPSENGVVAVKSGDGRVKISLGSSTKREMREIRKKLE 231
ASDD S+ + GG V NG GD R + +R E+R++L
Sbjct: 121 ASDDVSAGPNRDGGAV----------PNG-----HGDVRAAAEEKARKRRARSELRRQLA 165
Query: 232 IELDTVRSLVKRIEAKEVQISGGVSNSGVLPVSDVVDNGIK-RGHSEVASVGVPVTRV-- 288
ELD VR L KR++A I+ + + LPV HS+ A + PVT +
Sbjct: 166 SELDQVRGLSKRLKAAAEAIAAESAAALALPVVVPPPQLPVGYAHSQFA-LADPVTPIPG 224
Query: 289 ---GITRPSRPLNQLSISTVENSLGLSENVEKEKRTPKANQFYRNSEFLLAKDKFPPAES 345
G P R + Q TV S+ +E+ EKEKRTPKANQ Y+NSEFLLAKDKFPP++S
Sbjct: 225 QVAGAIVPVRSVMQRGPLTV--SVTHTESFEKEKRTPKANQLYQNSEFLLAKDKFPPSDS 282
Query: 346 NKKSKLNGKKQAGNELA-HGFGTG------SKIFKSCSALLEKLMKHKHGWVFNAPVDVK 398
+ + K K+ LA HG G S FK +LL +LMKHK GWVFN PVD
Sbjct: 283 HGRKKPKHHKKKHRSLASHGAGYDAEQRLYSHAFKKSMSLLSRLMKHKFGWVFNKPVDAV 342
Query: 399 NLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMA 458
LGLHDYF II+HPMDLGT+KTRL Y++P+EFA+DVRLTFHNAMTYNPKGQDVH MA
Sbjct: 343 ALGLHDYFAIIKHPMDLGTIKTRLTHGQYRNPREFADDVRLTFHNAMTYNPKGQDVHFMA 402
Query: 459 EQLLKIFEDKWVVIESEYNREMRIGADYEMGFHTPTSRKAPPLPPPLDMRRILDRSESIT 518
EQLL IFE +W IE+E + PPP+D+ R LDRS+S+
Sbjct: 403 EQLLGIFEAQWPEIEAEVQY-----------LASCPPLPNKFPPPPIDV-RFLDRSDSVK 450
Query: 519 HPM--DSRLKPISTTP--SSRTPAPKKPKAKDPHKRDMTYDEKQKLSTNLQSLPSEKLDN 574
H M DS+ +P+S TP S+RTP+ KKPKAKDP KRDMT DEK+KLS NLQ+LP EKLD
Sbjct: 451 HHMVLDSKSRPLSHTPTYSARTPSMKKPKAKDPDKRDMTIDEKRKLSNNLQNLPPEKLDV 510
Query: 575 IVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWELDRFVTNYKKSLSKNKRKAELANQARA 634
+VQIIK +N S+ QHDDEIEV+IDS+D ETLWELDRFV NYKK+LSK KRKAE A AR
Sbjct: 511 VVQIIKNKNLSVRQHDDEIEVEIDSMDTETLWELDRFVANYKKNLSKQKRKAERAMLARQ 570
Query: 635 VAQQNVQQQTP 645
A+ + Q P
Sbjct: 571 DAELHAQHVAP 581
>gi|413936535|gb|AFW71086.1| hypothetical protein ZEAMMB73_942769 [Zea mays]
Length = 671
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 219/432 (50%), Positives = 276/432 (63%), Gaps = 39/432 (9%)
Query: 233 ELDTVRSLVKRIEAKEVQISGGV-SNSGVLPV------SDVVDNGIKRGHSEVASVGVPV 285
ELD VR L KR++ ++ S LP+ VVD G + + VP+
Sbjct: 173 ELDQVRVLSKRLKEAAEALAQQEASEPAPLPMVVLPTQQQVVDAGYVQLQFSAGDMAVPM 232
Query: 286 TR--VGITRPSRPLNQ---LSISTVENSLGLSENVEKEKRTPKANQFYRNSEFLLAKDKF 340
+ P+R + Q L++S V N E EK KRTPKANQ Y+NSEFLLAKD+
Sbjct: 233 SAQIAAAVTPARSMLQRRPLTVSVVHN-----EAFEKVKRTPKANQLYQNSEFLLAKDRI 287
Query: 341 PPAESNKKSKLNGKKQAGNEL---AHGFGTGSKI----FKSCSALLEKLMKHKHGWVFNA 393
PP++S+ + K K+ L F ++ FK S+LL +LMKHK GWVFN
Sbjct: 288 PPSDSHVRKKSKHHKKKHRSLESRGADFDAERRLYSHAFKKSSSLLSRLMKHKFGWVFNK 347
Query: 394 PVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQD 453
PVD LGLHDYFTII+HPMDLGT++ RL++ Y++PKEFAEDVRLTFHNAMTYNPKGQD
Sbjct: 348 PVDPVALGLHDYFTIIKHPMDLGTIRGRLSRGQYRNPKEFAEDVRLTFHNAMTYNPKGQD 407
Query: 454 VHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEMGFHTPTSRKAPPLPPPLDMRRILDR 513
VH MAEQL IFE +W IE+E N + P +D+ L+R
Sbjct: 408 VHFMAEQLSGIFEAQWPEIEAEVNYLASCPPLPKKFPPPP-----------IDLH-FLER 455
Query: 514 SESITHPM--DSRLKPISTTPS-SRTPAPKKPKAKDPHKRDMTYDEKQKLSTNLQSLPSE 570
S+S+ H M D+ +PIS TP+ +RTP+ KKP+AKDP+KRDMT DEK+KLS NLQ+LP E
Sbjct: 456 SDSMRHHMALDTNSRPISHTPTYTRTPSMKKPRAKDPNKRDMTIDEKRKLSENLQNLPPE 515
Query: 571 KLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWELDRFVTNYKKSLSKNKRKAELAN 630
KLD +VQ+IK +N S+ QHDDEIEV+IDS+DAETLWELDRFV NYKK+LSK KRKAE A
Sbjct: 516 KLDAVVQVIKNKNLSVMQHDDEIEVEIDSMDAETLWELDRFVANYKKNLSKQKRKAERAM 575
Query: 631 QARAVAQQNVQQ 642
AR A+ Q+
Sbjct: 576 LARQDAELRAQR 587
>gi|297598920|ref|NP_001046443.2| Os02g0250300 [Oryza sativa Japonica Group]
gi|255670765|dbj|BAF08357.2| Os02g0250300 [Oryza sativa Japonica Group]
Length = 600
Score = 377 bits (969), Expect = e-101, Method: Compositional matrix adjust.
Identities = 250/491 (50%), Positives = 305/491 (62%), Gaps = 47/491 (9%)
Query: 172 ASDDSSSLNRQQGGVVVAATTREAPSENGVVAVKSGDGRVKISLGSSTKREMREIRKKLE 231
ASDD S+ + GG V NG GD R + +R E+R++L
Sbjct: 121 ASDDVSAGPNRDGGAV----------PNG-----HGDVRAAAEEKARKRRARSELRRQLA 165
Query: 232 IELDTVRSLVKRIEAKEVQISGGVSNSGVLPVSDVVDNGIK-RGHSEVASVGVPVTRV-- 288
ELD VR L KR++A I+ + + LPV HS+ A + PVT +
Sbjct: 166 SELDQVRGLSKRLKAAAEAIAAESAAALALPVVVPPPQLPVGYAHSQFA-LADPVTPIPG 224
Query: 289 ---GITRPSRPLNQLSISTVENSLGLSENVEKEKRTPKANQFYRNSEFLLAKDKFPPAES 345
G P R + Q TV S+ +E+ EKEKRTPKANQ Y+NSEFLLAKDKFPP++S
Sbjct: 225 QVAGAIVPVRSVMQRGPLTV--SVTHTESFEKEKRTPKANQLYQNSEFLLAKDKFPPSDS 282
Query: 346 NKKSKLNGKKQAGNELA-HGFGTG------SKIFKSCSALLEKLMKHKHGWVFNAPVDVK 398
+ + K K+ LA HG G S FK +LL +LMKHK GWVFN PVD
Sbjct: 283 HGRKKPKHHKKKHRSLASHGAGYDAEQRLYSHAFKKSMSLLSRLMKHKFGWVFNKPVDAV 342
Query: 399 NLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMA 458
LGLHDYF II+HPMDLGT+KTRL Y++P+EFA+DVRLTFHNAMTYNPKGQDVH MA
Sbjct: 343 ALGLHDYFAIIKHPMDLGTIKTRLTHGQYRNPREFADDVRLTFHNAMTYNPKGQDVHFMA 402
Query: 459 EQLLKIFEDKWVVIESEYNREMRIGADYEMGFHTPTSRKAPPLPPPLDMRRILDRSESIT 518
EQLL IFE +W IE+E + PPP+D+ R LDRS+S+
Sbjct: 403 EQLLGIFEAQWPEIEAEVQY-----------LASCPPLPNKFPPPPIDV-RFLDRSDSVK 450
Query: 519 HPM--DSRLKPISTTP--SSRTPAPKKPKAKDPHKRDMTYDEKQKLSTNLQSLPSEKLDN 574
H M DS+ +P+S TP S+RTP+ KKPKAKDP KRDMT DEK+KLS NLQ+LP EKLD
Sbjct: 451 HHMVLDSKSRPLSHTPTYSARTPSMKKPKAKDPDKRDMTIDEKRKLSNNLQNLPPEKLDV 510
Query: 575 IVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWELDRFVTNYKKSLSKNKRKAELANQARA 634
+VQIIK +N S+ QHDDEIEV+IDS+D ETLWELDRFV NYKK+LSK KRKAE A AR
Sbjct: 511 VVQIIKNKNLSVRQHDDEIEVEIDSMDTETLWELDRFVANYKKNLSKQKRKAERAMLARQ 570
Query: 635 VAQQNVQQQTP 645
A+ + Q P
Sbjct: 571 DAELHAQHVAP 581
>gi|413936534|gb|AFW71085.1| hypothetical protein ZEAMMB73_942769 [Zea mays]
Length = 667
Score = 377 bits (968), Expect = e-101, Method: Compositional matrix adjust.
Identities = 219/432 (50%), Positives = 276/432 (63%), Gaps = 39/432 (9%)
Query: 233 ELDTVRSLVKRIEAKEVQISGGV-SNSGVLPV------SDVVDNGIKRGHSEVASVGVPV 285
ELD VR L KR++ ++ S LP+ VVD G + + VP+
Sbjct: 173 ELDQVRVLSKRLKEAAEALAQQEASEPAPLPMVVLPTQQQVVDAGYVQLQFSAGDMAVPM 232
Query: 286 TR--VGITRPSRPLNQ---LSISTVENSLGLSENVEKEKRTPKANQFYRNSEFLLAKDKF 340
+ P+R + Q L++S V N E EK KRTPKANQ Y+NSEFLLAKD+
Sbjct: 233 SAQIAAAVTPARSMLQRRPLTVSVVHN-----EAFEKVKRTPKANQLYQNSEFLLAKDRI 287
Query: 341 PPAESNKKSKLNGKKQAGNEL---AHGFGTGSKI----FKSCSALLEKLMKHKHGWVFNA 393
PP++S+ + K K+ L F ++ FK S+LL +LMKHK GWVFN
Sbjct: 288 PPSDSHVRKKSKHHKKKHRSLESRGADFDAERRLYSHAFKKSSSLLSRLMKHKFGWVFNK 347
Query: 394 PVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQD 453
PVD LGLHDYFTII+HPMDLGT++ RL++ Y++PKEFAEDVRLTFHNAMTYNPKGQD
Sbjct: 348 PVDPVALGLHDYFTIIKHPMDLGTIRGRLSRGQYRNPKEFAEDVRLTFHNAMTYNPKGQD 407
Query: 454 VHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEMGFHTPTSRKAPPLPPPLDMRRILDR 513
VH MAEQL IFE +W IE+E N + P +D+ L+R
Sbjct: 408 VHFMAEQLSGIFEAQWPEIEAEVNYLASCPPLPKKFPPPP-----------IDLH-FLER 455
Query: 514 SESITHPM--DSRLKPISTTPS-SRTPAPKKPKAKDPHKRDMTYDEKQKLSTNLQSLPSE 570
S+S+ H M D+ +PIS TP+ +RTP+ KKP+AKDP+KRDMT DEK+KLS NLQ+LP E
Sbjct: 456 SDSMRHHMALDTNSRPISHTPTYTRTPSMKKPRAKDPNKRDMTIDEKRKLSENLQNLPPE 515
Query: 571 KLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWELDRFVTNYKKSLSKNKRKAELAN 630
KLD +VQ+IK +N S+ QHDDEIEV+IDS+DAETLWELDRFV NYKK+LSK KRKAE A
Sbjct: 516 KLDAVVQVIKNKNLSVMQHDDEIEVEIDSMDAETLWELDRFVANYKKNLSKQKRKAERAM 575
Query: 631 QARAVAQQNVQQ 642
AR A+ Q+
Sbjct: 576 LARQDAELRAQR 587
>gi|357141014|ref|XP_003572045.1| PREDICTED: transcription factor GTE4-like [Brachypodium distachyon]
Length = 629
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 234/497 (47%), Positives = 303/497 (60%), Gaps = 61/497 (12%)
Query: 185 GVVVAATTREAPSENGVVAVKSGDGRVKISL--GSSTKREMREIRKKLEIELDTVRSLVK 242
G AA + + PS +G AV +G ++ + + +RE ++R++L ELD VR L K
Sbjct: 87 GDPTAAASNDFPSRDGG-AVPNGHADIQAAAEEKAWKRRERSDLRRQLASELDQVRVLSK 145
Query: 243 RI----EAKEVQISGGVSNSGVLPVSDVVDNGIKRGHSEV------------ASVGVPVT 286
R+ EA V+ + V+ ++ +G H + A+ VP
Sbjct: 146 RLKAAGEALAVEAASTPLPLAVVRPPPLLSSGY--AHPQFSGTDALTPIPAQATSAVPPV 203
Query: 287 RVGITRPSRPLNQLSISTVENSLGLSENVEKEKRTPKANQFYRNSEFLLAKDKFPPAESN 346
R + P RPL + E+ EKEKRTPKANQ Y+NSEFLLAKD+ P ++S+
Sbjct: 204 RSFL--PRRPLIVPEVHM--------ESFEKEKRTPKANQLYQNSEFLLAKDRIPASDSH 253
Query: 347 KKSKLNGKKQAGNELAH-GFGTGSKI----FKSCSALLEKLMKHKHGWVFNAPVDVKNLG 401
+ K K+ A G+ + ++ FK S+LL +LMKHK GWVFN PVD LG
Sbjct: 254 GRKKTKHHKKKHRSSADAGYNSEQRLYSHAFKKSSSLLSRLMKHKFGWVFNKPVDPVALG 313
Query: 402 LHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQL 461
LHDYF II+HPMDLGT+K +L + Y++PKEFA+DVRLTFHNAMTYNPKGQDVH MAEQL
Sbjct: 314 LHDYFAIIKHPMDLGTIKAQLTRGQYRNPKEFADDVRLTFHNAMTYNPKGQDVHFMAEQL 373
Query: 462 LKIFEDKWVVIESEYNREMRIGADYEMGFHTPTSRKAPPLPPPLDMRRILDRSESITHPM 521
L IFE +W I++E +Y + PP +D+ R+L+RS+S+ H M
Sbjct: 374 LGIFEAQWPEIQAE--------VEYLASCPPLPKKFPPPP---IDL-RLLERSDSLKHHM 421
Query: 522 --DSRLKPISTTP--SSRTPAPKKPKAKDPHKRDMTYDEKQKLSTNLQSLPSEKLDNIVQ 577
DS+ +P+S TP S RTP+ KKPKAKD KRDMT DEK+KLS NLQ+LP EKLD +VQ
Sbjct: 422 ALDSKSRPLSHTPTYSVRTPSLKKPKAKDLDKRDMTIDEKRKLSNNLQNLPPEKLDIVVQ 481
Query: 578 IIKKRNSSLFQHDDEIEVDIDSVDAETLWELDRFVTNYKKSLSKNKRKAELANQAR---- 633
IIK +N S+ QHDDEIEV+IDS+DAETLWELDRFV N+KK+LSK KRKAE A AR
Sbjct: 482 IIKNKNLSVRQHDDEIEVEIDSMDAETLWELDRFVANFKKNLSKQKRKAERAMLARQDAE 541
Query: 634 -----AVAQQNVQQQTP 645
A Q QQ P
Sbjct: 542 LRALHAAQHQQTSQQPP 558
>gi|326496376|dbj|BAJ94650.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 662
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 232/447 (51%), Positives = 284/447 (63%), Gaps = 44/447 (9%)
Query: 220 KREMR-EIRKKLEIELDTVRSLVKRI----EAKEVQISGGVSNSGVLPVSDVVDNGIKRG 274
KR +R E+R++L ELD VR L KR+ EA V+ S V L + V G
Sbjct: 167 KRRVRSELRRQLASELDQVRVLSKRLKAAGEALAVEASQPVPRPPPLLTAGYVHPQFS-G 225
Query: 275 HSEVASVGVPVTRVGITRPSRPLNQ---LSISTVENSLGLSENVEKEKRTPKANQFYRNS 331
V V PVT P R Q L + V E+++KEKRTPKANQ Y+NS
Sbjct: 226 SDAVTPVPAPVT--ASVPPVRSFLQRRPLIVPEVH-----IESLDKEKRTPKANQLYQNS 278
Query: 332 EFLLAKDKFPPAESN-KKSKLNGKKQAGNELAHGFGTGSKI----FKSCSALLEKLMKHK 386
EFLLAKD+ PP++S+ +K + KK+ + G+ ++ FK S+LL +LMKHK
Sbjct: 279 EFLLAKDRIPPSDSHGRKKTKHHKKKHRSSTGAGYNAEQRLYSHAFKKSSSLLCRLMKHK 338
Query: 387 HGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMT 446
GWVFN PVD LGLHDYF II+HPMDLGT+K +L + Y+ PKEFA DVRLTFHNAMT
Sbjct: 339 FGWVFNKPVDPVALGLHDYFAIIKHPMDLGTIKGQLTRGHYRDPKEFANDVRLTFHNAMT 398
Query: 447 YNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEMGFHTPTSRKAPPLPPPLD 506
YNPKGQDVH MAEQLL IFE +W IE+E DY + PP +D
Sbjct: 399 YNPKGQDVHFMAEQLLGIFEAQWPEIEAE--------VDYLASCPPLPKKFPPPP---ID 447
Query: 507 MRRILDRSESITHPM--DSRLKPISTTP-SSRTPAPKKPKAKDPHKRDMTYDEKQKLSTN 563
+ R+L+RS+S+ M DS+ +PIS TP S RTP+ KKPKAKD KRDMT DEK+KLS N
Sbjct: 448 L-RLLERSDSLKPHMALDSKSRPISHTPISVRTPSLKKPKAKDLDKRDMTIDEKRKLSNN 506
Query: 564 LQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWELDRFVTNYKKSLSKNK 623
LQ+LP EKLD +VQIIK +N S+ QH+DEIEV+IDS+DAETLWELDRFV N+KK+LSK K
Sbjct: 507 LQNLPPEKLDIVVQIIKNKNLSVRQHEDEIEVEIDSMDAETLWELDRFVANFKKNLSKQK 566
Query: 624 RKAELANQARA--------VAQQNVQQ 642
RKAE A AR AQQ QQ
Sbjct: 567 RKAERAMLARQDVELRALHAAQQTSQQ 593
>gi|449439059|ref|XP_004137305.1| PREDICTED: transcription factor GTE4-like [Cucumis sativus]
gi|449483310|ref|XP_004156552.1| PREDICTED: transcription factor GTE4-like [Cucumis sativus]
Length = 538
Score = 365 bits (938), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 212/427 (49%), Positives = 267/427 (62%), Gaps = 48/427 (11%)
Query: 210 RVKISLGSSTKREMREIRKKLEIELDTVRSLVKRIEAKEVQISGGVSNSGVLPVSDVVDN 269
RV+I+L S ++ ++E+ KL+ ELD VRSLVK+ E +E+Q+SG + G +N
Sbjct: 98 RVRINLNSRSRFGIKELTTKLKGELDQVRSLVKKFETQELQLSGYGGDVGHSQSQFSANN 157
Query: 270 GIKRG--------HSEVASVGVPVTRVGITRPSRPLNQLSISTVENSLGLSENVEKEKRT 321
++R +SEV S VP +R+ + ++V + G E EKE
Sbjct: 158 LVERVGTVSTMKVNSEVGSADVPASRL-----------VRCASVAENFG--EFAEKEVSK 204
Query: 322 PKANQFYRNSEFLLAKDKFPPAESNKKSKLNGKKQAGNELAHGFGTGSKIFKSCSALLEK 381
++NS++ K+ P ++ N LNG G + KSCS LLE+
Sbjct: 205 ------HKNSKYASTKE-LPMSDCN----LNG------------GKIGPVLKSCSNLLER 241
Query: 382 LMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTF 441
LMKHK GWVFN PVD K LGLHDY II PMDLGT+K RLNKNWYKSP+EFAEDVRLTF
Sbjct: 242 LMKHKFGWVFNVPVDAKRLGLHDYHKIITKPMDLGTIKMRLNKNWYKSPREFAEDVRLTF 301
Query: 442 HNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEMGFHTPTSRKAPPL 501
NA+TYNPKG+DVH+MAEQL IFE+KW IE + N D TPTSRK+P L
Sbjct: 302 SNAITYNPKGEDVHMMAEQLSNIFEEKWKTIEGKQNVGKGFQVDDGSVLPTPTSRKSPAL 361
Query: 502 PPPLDMRRILDRSESIT-HPMDSRLKPISTTPSSRTPAPKKPKAKDPHKRDMTYDEKQKL 560
R RS+S T H + S K P+ P KKPKAK+ RDMTY+EKQKL
Sbjct: 362 ATRPVESRTFSRSDSTTKHFLTSNPK---QPPTDVAPPDKKPKAKNHEIRDMTYEEKQKL 418
Query: 561 STNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWELDRFVTNYKKSLS 620
S +LQ LPS+KL+N+V+IIKKRN LFQ+DDEIE+DI SVD+ETLWEL+RFV NYKKSL
Sbjct: 419 SIDLQDLPSDKLNNVVKIIKKRNQGLFQNDDEIELDIGSVDSETLWELERFVANYKKSLI 478
Query: 621 KNKRKAE 627
KNKRKA+
Sbjct: 479 KNKRKAD 485
>gi|218190413|gb|EEC72840.1| hypothetical protein OsI_06575 [Oryza sativa Indica Group]
Length = 420
Score = 362 bits (929), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 208/349 (59%), Positives = 247/349 (70%), Gaps = 23/349 (6%)
Query: 308 SLGLSENVEKEKRTPKANQFYRNSEFLLAKDKFPPAESNKKSKLNGKKQAGNELA-HGFG 366
S+ +E+ EKEKRTPKANQ Y+NSEFLLAKDKFPP++S+ + K K+ LA HG G
Sbjct: 9 SVTHTESFEKEKRTPKANQLYQNSEFLLAKDKFPPSDSHGRKKPKHHKKKHRSLASHGAG 68
Query: 367 TG------SKIFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKT 420
S FK +LL +LMKHK GWVFN PVD LGLHDYF II+HPMDLGT+KT
Sbjct: 69 YDAEQRLYSHAFKKSMSLLSRLMKHKFGWVFNKPVDAVALGLHDYFAIIKHPMDLGTIKT 128
Query: 421 RLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREM 480
RL Y++P+EFA+DVRLTFHNAMTYNPKGQDVH MAEQLL IFE +W IE+E
Sbjct: 129 RLTHGQYRNPREFADDVRLTFHNAMTYNPKGQDVHFMAEQLLGIFEVQWPEIEAEVQY-- 186
Query: 481 RIGADYEMGFHTPTSRKAPPLPPPLDMRRILDRSESITHPM--DSRLKPISTTP--SSRT 536
+ PPP+D+ R LDRS+S+ H M DS+ +P+S TP S+RT
Sbjct: 187 ---------LASCPPLPNKFPPPPIDV-RFLDRSDSVKHHMALDSKSRPLSHTPTYSART 236
Query: 537 PAPKKPKAKDPHKRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVD 596
P+ KKPKAKDP KRDMT DEK+KLS NLQ+LP EKLD +VQIIK +N S+ QHDDEIEV+
Sbjct: 237 PSMKKPKAKDPDKRDMTIDEKRKLSNNLQNLPPEKLDVVVQIIKNKNLSVRQHDDEIEVE 296
Query: 597 IDSVDAETLWELDRFVTNYKKSLSKNKRKAELANQARAVAQQNVQQQTP 645
IDS+D ETLWELDRFV NYKK+LSK KRKAE A AR A+ + Q P
Sbjct: 297 IDSMDTETLWELDRFVANYKKNLSKQKRKAERAMLARQDAELHAQHVAP 345
>gi|413947734|gb|AFW80383.1| hypothetical protein ZEAMMB73_461985 [Zea mays]
gi|413947735|gb|AFW80384.1| hypothetical protein ZEAMMB73_461985 [Zea mays]
Length = 490
Score = 341 bits (875), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 205/376 (54%), Positives = 239/376 (63%), Gaps = 45/376 (11%)
Query: 371 IFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSP 430
+FK+CSALL++LMKHKH WVFN PVD LGLHDY TII PMDLGTVK++L Y+SP
Sbjct: 129 VFKTCSALLQRLMKHKHSWVFNTPVDASALGLHDYHTIITKPMDLGTVKSKLAAGQYRSP 188
Query: 431 KEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEMGF 490
+EFA DVRLTF NAMTYNPKGQDVH MAEQLL +FE+KW+ IE+E ++
Sbjct: 189 REFAGDVRLTFRNAMTYNPKGQDVHFMAEQLLNMFEEKWLEIEAELA---------QLSP 239
Query: 491 HTPT-SRKAPPLPPPLDMRRILDRSESITHPMDSRLKPISTTPSSRTPAPKKPKAKDPHK 549
PT S AP P +D R L+RS+S H P T + R P KKPKA++P+K
Sbjct: 240 QPPTPSSAAPRKPKEIDNSRALERSDSTVHAAGMEATP--KTHNGRPPVSKKPKAREPNK 297
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWELD 609
RDMT+ EKQ+LS NLQ LP EKLDN+VQIIKKRNSSL QHDDEIEVDIDS D ETLWELD
Sbjct: 298 RDMTFWEKQRLSNNLQDLPPEKLDNVVQIIKKRNSSLNQHDDEIEVDIDSFDVETLWELD 357
Query: 610 RFVTNYKKSLSKNKRKAEL------------------------ANQARAVAQQNVQQQTP 645
RFVTNY+KS++KNKRKAEL A+Q R A VQ+ P
Sbjct: 358 RFVTNYRKSITKNKRKAELSAVRPDEADPDQEPEKVERVRQDEADQDRIPA---VQEPIP 414
Query: 646 AP--VVTEVRKEIRTDD--RIGSTSSPVQVEKQ--VDNGSRSSSSSSSSSDSGSSSSDSD 699
P V E KEI DD R SSP +E Q + G SSS SSSS SSS
Sbjct: 415 EPESVDVEPPKEIAADDNGRYVGESSPGHLEDQEGENPGRSSSSGSSSSDSGSSSSDTDT 474
Query: 700 SETSSSGSEGGNSPRT 715
+S+ GS+ SPRT
Sbjct: 475 DSSSADGSDAAQSPRT 490
>gi|222617974|gb|EEE54106.1| hypothetical protein OsJ_00865 [Oryza sativa Japonica Group]
Length = 508
Score = 339 bits (869), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 203/378 (53%), Positives = 240/378 (63%), Gaps = 44/378 (11%)
Query: 371 IFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSP 430
+FKSC ALL +LMKHKH WVFN PVD LGLHDY TII PMDLGTVK+RL YKSP
Sbjct: 142 VFKSCGALLARLMKHKHSWVFNTPVDASALGLHDYHTIITKPMDLGTVKSRLAAGHYKSP 201
Query: 431 KEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEMGF 490
+EFA DVRLTF NAM YNPKGQDVH MAEQLL +FE+KW IE+E ++
Sbjct: 202 REFAGDVRLTFQNAMRYNPKGQDVHFMAEQLLNMFEEKWPEIEAEV---------AQLSP 252
Query: 491 HTPT-SRKAPPLPPPLDMRRILDRSESITHPMDSRLKPISTTPSSRTPAPKKPKAKDPHK 549
PT S AP P +D ++L+RS+S H P T R P KKPKA++P+K
Sbjct: 253 QPPTPSSAAPRKPKEIDNSKVLERSDSTVHAAGMEATPKQNT--GRPPVLKKPKAREPNK 310
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWELD 609
R+MT+ EKQ+LS NLQ LP EKLDN+VQIIKKRN SL QHDDEIEVDIDS D ETLWELD
Sbjct: 311 REMTFWEKQRLSNNLQELPPEKLDNVVQIIKKRNLSLSQHDDEIEVDIDSFDVETLWELD 370
Query: 610 RFVTNYKKSLSKNKRKAE--LANQ--------------AR---------AVAQQNVQQQT 644
RFVTNYKKS+SKNKRKAE +A Q AR Q+ +
Sbjct: 371 RFVTNYKKSISKNKRKAENPVAGQDEMNHDIELEKTEHARLDEVEQDQMPPVQETLHNPE 430
Query: 645 PAPVVTEVRKEIRTDD--RIGSTSSPVQVEKQV-DNGSR---SSSSSSSSSDSGSSSSDS 698
P + E KE DD R +SSPV +E Q +N R S SSSS S S S+ +D+
Sbjct: 431 PESIDIEPPKENTADDNERYVGSSSPVHLEDQKGENAGRSSSSGSSSSDSGSSSSAYADT 490
Query: 699 DSETSSS-GSEGGNSPRT 715
D+++SS+ GS+ SPRT
Sbjct: 491 DTDSSSADGSDAAQSPRT 508
>gi|242055997|ref|XP_002457144.1| hypothetical protein SORBIDRAFT_03g001920 [Sorghum bicolor]
gi|241929119|gb|EES02264.1| hypothetical protein SORBIDRAFT_03g001920 [Sorghum bicolor]
Length = 482
Score = 336 bits (862), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 175/307 (57%), Positives = 210/307 (68%), Gaps = 14/307 (4%)
Query: 371 IFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSP 430
+FK+CS LL++LMKHKH WVFN PVD LGLHDY TII PMDLGTVK++L YKSP
Sbjct: 137 VFKTCSVLLQRLMKHKHSWVFNKPVDASALGLHDYHTIITKPMDLGTVKSKLGAGQYKSP 196
Query: 431 KEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEMGF 490
+EFA DVRLTF NAMTYNPKGQDVH MAEQLL +FE+KW IE+E ++
Sbjct: 197 REFAGDVRLTFQNAMTYNPKGQDVHFMAEQLLNMFEEKWPEIEAEV---------AQLSP 247
Query: 491 HTPT-SRKAPPLPPPLDMRRILDRSESITHPMDSRLKPISTTPSSRTPAPKKPKAKDPHK 549
PT S AP P +D R+L+RS+S H P + T R P KKPKA++P+K
Sbjct: 248 QPPTPSSAAPRKPKEIDNSRVLERSDSTVHAAAMEATPKTHT--GRPPVLKKPKAREPNK 305
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWELD 609
RDMT+ EKQ+LS NLQ LP EKLDN+VQIIKKRN SL QHDDEIEVDIDS D ETLWELD
Sbjct: 306 RDMTFWEKQRLSNNLQDLPPEKLDNVVQIIKKRNLSLSQHDDEIEVDIDSFDVETLWELD 365
Query: 610 RFVTNYKKSLSKNKRKAELANQARAVAQQNVQQQTPAPVVTEVRKEIRTDDRIGSTSSPV 669
RFVTNY+KS++KNKRKAEL A + + Q+ V VR++ D+I + P+
Sbjct: 366 RFVTNYRKSITKNKRKAELELSAVRPDEADPDQEPEK--VEHVRQDEPDQDQIPAVQEPI 423
Query: 670 QVEKQVD 676
+ VD
Sbjct: 424 PEREAVD 430
>gi|414875721|tpg|DAA52852.1| TPA: hypothetical protein ZEAMMB73_954621 [Zea mays]
Length = 490
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 204/378 (53%), Positives = 238/378 (62%), Gaps = 47/378 (12%)
Query: 371 IFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSP 430
+FK+C+ALL +LMKHKH WVFN PVD LGLHDY TII PMDLGTVK++L YKSP
Sbjct: 127 VFKTCAALLSRLMKHKHSWVFNKPVDASALGLHDYHTIITKPMDLGTVKSKLGAGQYKSP 186
Query: 431 KEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEMGF 490
+EFA DVRLTF NAMTYNPKGQDVH MAEQLL +FE+KW IE+E ++
Sbjct: 187 REFAGDVRLTFQNAMTYNPKGQDVHFMAEQLLNMFEEKWPEIEAEI---------AQLSP 237
Query: 491 HTPT-SRKAPPLPPP--LDMRRILDRSESITHPMDSRLKPISTTPSSRTPAP---KKPKA 544
PT S AP P P +D R L+RS+S H I TP + T P KKPKA
Sbjct: 238 QPPTPSSAAPKKPKPKEIDNSRPLERSDSTVHAAG-----IEATPKTHTGRPQVLKKPKA 292
Query: 545 KDPHKRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAET 604
++P+KRDMT+ EKQ+LS NLQ LP EKLDN+VQIIKKRN SL QHDDEIEVDIDS D ET
Sbjct: 293 REPNKRDMTFWEKQRLSNNLQDLPPEKLDNVVQIIKKRNLSLSQHDDEIEVDIDSFDVET 352
Query: 605 LWELDRFVTNYKKSLSKNKRKAELA-------------------NQARAVAQQ--NVQQQ 643
LWELDRFVTNY+KS++KNKRKAEL+ Q +A Q VQ+
Sbjct: 353 LWELDRFVTNYRKSITKNKRKAELSAVRPDEADPDQEPEKVEHVRQGKADQDQIPAVQEP 412
Query: 644 TPAPVVTEV--RKEIRTDD--RIGSTSSPVQVEKQV--DNGSRSSSSSSSSSDSGSSSSD 697
P P +V KE DD R SSP +E Q + G SSS SSSS SSS
Sbjct: 413 IPEPETVDVDPPKESAADDNERCVGESSPGHLEDQKGENAGRSSSSGSSSSDSGSSSSDT 472
Query: 698 SDSETSSSGSEGGNSPRT 715
+S+ GS+ G SPRT
Sbjct: 473 DTDSSSADGSDAGQSPRT 490
>gi|357127683|ref|XP_003565508.1| PREDICTED: transcription factor GTE4-like [Brachypodium distachyon]
Length = 494
Score = 333 bits (855), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 181/335 (54%), Positives = 214/335 (63%), Gaps = 40/335 (11%)
Query: 371 IFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSP 430
+FKSC LL +LMKHKHGWVFN PVD LGLHDY TII PMDLGTVK+RL + YKSP
Sbjct: 126 VFKSCGLLLTRLMKHKHGWVFNVPVDASALGLHDYHTIITKPMDLGTVKSRLAEGHYKSP 185
Query: 431 KEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEMGF 490
+EFA +VRLTF NAM YNPKGQDV+ MAEQLL +FE+KW IE+E ++
Sbjct: 186 REFATEVRLTFQNAMKYNPKGQDVYFMAEQLLNMFEEKWPDIEAEIA---------QLSP 236
Query: 491 HTPT-SRKAPPLPPPLDMRRILDRSESITHPMDSRLKPISTTPSSRTPAPKKPKAKDPHK 549
PT S AP P +D R+L+RS+S H P + R P KKPKA++P+K
Sbjct: 237 QPPTPSSAAPKKPREIDNGRVLERSDSTAHAAGLEATPKPHPGTGRPPVLKKPKAREPNK 296
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWELD 609
R+MT+ EKQKLS +LQ LP EKLDN+VQIIKKRNSSL QHDDEIEVDIDS D ETLWELD
Sbjct: 297 REMTFWEKQKLSNDLQDLPPEKLDNVVQIIKKRNSSLNQHDDEIEVDIDSFDVETLWELD 356
Query: 610 RFVTNYKKSLSKNKRKAELA---------------------NQARAVAQQNVQQQTPAPV 648
RFVTNYKKS++KNKRKAEL +++ VQ+ P PV
Sbjct: 357 RFVTNYKKSMTKNKRKAELPVVRQDESEHDPDMEKIEHRRQDESEQEQMLTVQETNPEPV 416
Query: 649 VTEV-------RKEIRTDD--RIGSTSSPVQVEKQ 674
E+ KEI DD R +SSP +E Q
Sbjct: 417 DVELPMVDVEPPKEIAPDDNGRYVGSSSPAHLEDQ 451
>gi|218187737|gb|EEC70164.1| hypothetical protein OsI_00884 [Oryza sativa Indica Group]
Length = 512
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 165/258 (63%), Positives = 187/258 (72%), Gaps = 12/258 (4%)
Query: 371 IFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSP 430
+FKSC ALL +LMKHKH WVFN PVD LGLHDY TII PMDLGTVK+RL YKSP
Sbjct: 92 VFKSCGALLARLMKHKHSWVFNTPVDASALGLHDYHTIITKPMDLGTVKSRLAAGHYKSP 151
Query: 431 KEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEMGF 490
+EFA DVRLTF NAM YNPKGQDVH MAEQLL +FE+KW IE+E ++
Sbjct: 152 REFAGDVRLTFQNAMRYNPKGQDVHFMAEQLLNMFEEKWPEIEAEV---------AQLSP 202
Query: 491 HTPT-SRKAPPLPPPLDMRRILDRSESITHPMDSRLKPISTTPSSRTPAPKKPKAKDPHK 549
PT S AP P +D ++L+RS+S H P T R P KKPKA++P+K
Sbjct: 203 QPPTPSSAAPRKPKEIDNSKVLERSDSTVHAAGMEATPKQNT--GRPPVLKKPKAREPNK 260
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWELD 609
R+MT+ EKQ+LS NLQ LP EKLDN+VQIIKKRN SL QHDDEIEVDIDS D ETLWELD
Sbjct: 261 REMTFWEKQRLSNNLQELPPEKLDNVVQIIKKRNLSLSQHDDEIEVDIDSFDVETLWELD 320
Query: 610 RFVTNYKKSLSKNKRKAE 627
RFVTNYKKS+SKNKRKAE
Sbjct: 321 RFVTNYKKSISKNKRKAE 338
>gi|326489531|dbj|BAK01746.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 510
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 161/268 (60%), Positives = 191/268 (71%), Gaps = 18/268 (6%)
Query: 371 IFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSP 430
+F+SC+ +L +LMKHKHGWVFN PVD LGLHDY TII PMDLGTVK+RL YKSP
Sbjct: 126 VFRSCAVVLARLMKHKHGWVFNVPVDASALGLHDYHTIITKPMDLGTVKSRLAAGHYKSP 185
Query: 431 KEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEMGF 490
+EFA +VRLTF NAM YNPKGQDV+ MAEQLL +FE+KW IE+E ++
Sbjct: 186 REFATEVRLTFQNAMRYNPKGQDVYFMAEQLLNMFEEKWPEIEAEIA---------QLSP 236
Query: 491 HTPTSRKAPP---------LPPPLDMRRILDRSESITHPMDSRLKPISTTPSSRTPAPKK 541
PT APP +D R L+RS+S H P ++R P KK
Sbjct: 237 QPPTPSSAPPKKQKQREREREREMDNARALERSDSTAHAAALEAPPKPQAGTARPPVLKK 296
Query: 542 PKAKDPHKRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVD 601
PKA+DP+KR+MT+ EKQ+LS +LQ LP+EKLDN+VQIIKKRNSSL QHDDEIEVDIDS D
Sbjct: 297 PKARDPNKREMTFWEKQRLSNDLQDLPAEKLDNVVQIIKKRNSSLNQHDDEIEVDIDSFD 356
Query: 602 AETLWELDRFVTNYKKSLSKNKRKAELA 629
ETLWELDRFVTNYKKS++KNKRKAEL+
Sbjct: 357 VETLWELDRFVTNYKKSITKNKRKAELS 384
>gi|414875719|tpg|DAA52850.1| TPA: hypothetical protein ZEAMMB73_954621 [Zea mays]
gi|414875720|tpg|DAA52851.1| TPA: hypothetical protein ZEAMMB73_954621 [Zea mays]
Length = 948
Score = 325 bits (833), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 177/314 (56%), Positives = 209/314 (66%), Gaps = 24/314 (7%)
Query: 369 SKIFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
+ +FK+C+ALL +LMKHKH WVFN PVD LGLHDY TII PMDLGTVK++L YK
Sbjct: 125 APVFKTCAALLSRLMKHKHSWVFNKPVDASALGLHDYHTIITKPMDLGTVKSKLGAGQYK 184
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEM 488
SP+EFA DVRLTF NAMTYNPKGQDVH MAEQLL +FE+KW IE+E ++
Sbjct: 185 SPREFAGDVRLTFQNAMTYNPKGQDVHFMAEQLLNMFEEKWPEIEAEIA---------QL 235
Query: 489 GFHTPT-SRKAPPLPPP--LDMRRILDRSESITHPMDSRLKPISTTPSSRTPAP---KKP 542
PT S AP P P +D R L+RS+S H I TP + T P KKP
Sbjct: 236 SPQPPTPSSAAPKKPKPKEIDNSRPLERSDSTVHAAG-----IEATPKTHTGRPQVLKKP 290
Query: 543 KAKDPHKRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDA 602
KA++P+KRDMT+ EKQ+LS NLQ LP EKLDN+VQIIKKRN SL QHDDEIEVDIDS D
Sbjct: 291 KAREPNKRDMTFWEKQRLSNNLQDLPPEKLDNVVQIIKKRNLSLSQHDDEIEVDIDSFDV 350
Query: 603 ETLWELDRFVTNYKKSLSKNKRKAELANQARAVAQQNVQQQTPAPVVTEVRKEIRTDDRI 662
ETLWELDRFVTNY+KS++KNKRKAEL+ AV V VR+ D+I
Sbjct: 351 ETLWELDRFVTNYRKSITKNKRKAELS----AVRPDEADPDQEPEKVEHVRQGKADQDQI 406
Query: 663 GSTSSPVQVEKQVD 676
+ P+ + VD
Sbjct: 407 PAVQEPIPEPETVD 420
>gi|226495673|ref|NP_001142282.1| uncharacterized protein LOC100274451 [Zea mays]
gi|194707994|gb|ACF88081.1| unknown [Zea mays]
Length = 350
Score = 318 bits (814), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 197/364 (54%), Positives = 227/364 (62%), Gaps = 45/364 (12%)
Query: 383 MKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFH 442
MKHKH WVFN PVD LGLHDY TII PMDLGTVK++L Y+SP+EFA DVRLTF
Sbjct: 1 MKHKHSWVFNTPVDASALGLHDYHTIITKPMDLGTVKSKLAAGQYRSPREFAGDVRLTFR 60
Query: 443 NAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEMGFHTPT-SRKAPPL 501
NAMTYNPKGQDVH MAEQLL +FE+KW+ IE+E ++ PT S AP
Sbjct: 61 NAMTYNPKGQDVHFMAEQLLNMFEEKWLEIEAEL---------AQLSPQPPTPSSAAPRK 111
Query: 502 PPPLDMRRILDRSESITHPMDSRLKPISTTPSSRTPAPKKPKAKDPHKRDMTYDEKQKLS 561
P +D R L+RS+S H P T + R P KKPKA++P+KRDMT+ EKQ+LS
Sbjct: 112 PKEIDNSRALERSDSTVHAAGMEATP--KTHNGRPPVSKKPKAREPNKRDMTFWEKQRLS 169
Query: 562 TNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWELDRFVTNYKKSLSK 621
NLQ LP EKLDN+VQIIKKRNSSL QHDDEIEVDIDS D ETLWELDRFVTNY+KS++K
Sbjct: 170 NNLQDLPPEKLDNVVQIIKKRNSSLNQHDDEIEVDIDSFDVETLWELDRFVTNYRKSITK 229
Query: 622 NKRKAEL------------------------ANQARAVAQQNVQQQTPAP--VVTEVRKE 655
NKRKAEL A+Q R A VQ+ P P V E KE
Sbjct: 230 NKRKAELSAVRPDEADPDQEPEKVERVRQDEADQDRIPA---VQEPIPEPESVDVEPPKE 286
Query: 656 IRTDD--RIGSTSSPVQVEKQ--VDNGSRSSSSSSSSSDSGSSSSDSDSETSSSGSEGGN 711
I DD R SSP +E Q + G SSS SSSS SSS +S+ GS+
Sbjct: 287 IAADDNGRYVGESSPGHLEDQEGENPGRSSSSGSSSSDSGSSSSDTDTDSSSADGSDAAQ 346
Query: 712 SPRT 715
SPRT
Sbjct: 347 SPRT 350
>gi|224056555|ref|XP_002298908.1| global transcription factor group [Populus trichocarpa]
gi|222846166|gb|EEE83713.1| global transcription factor group [Populus trichocarpa]
Length = 411
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 167/346 (48%), Positives = 212/346 (61%), Gaps = 51/346 (14%)
Query: 375 CSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFA 434
C LL KLMKH++GWVFN PVD K L LHDY+ II+HPMDLGTVK+RL+KNWYKSPKEFA
Sbjct: 35 CGELLGKLMKHQYGWVFNEPVDAKKLKLHDYYKIIKHPMDLGTVKSRLSKNWYKSPKEFA 94
Query: 435 EDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEMGF---- 490
EDVRLTF+NAM YN KGQDVH MA++LLKIFE+ W +++ N + R EMGF
Sbjct: 95 EDVRLTFNNAMKYNEKGQDVHAMADKLLKIFEENWANFKAKTNFDKR----GEMGFDASL 150
Query: 491 -----------------HTPTSRKAP------------------------PLPPPLDMRR 509
H P S++ P P PL+ +
Sbjct: 151 PTPALKRAPGPRASSPAHGPASKRVPGPRASSPTSGPASASARAPSPASFPQTMPLETK- 209
Query: 510 ILDRSESITHPMDSRLKPISTTPS-SRTPAPKKPKAKDPHKRDMTYDEKQKLSTNLQSLP 568
LDR++S+T + S++K T + RT KPK + + MTY+EKQKLS +LQSLP
Sbjct: 210 TLDRTDSLTELVHSKMKAAKTVANQGRTSVLNKPKKNETVRGVMTYEEKQKLSIHLQSLP 269
Query: 569 SEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWELDRFVTNYKKSLSKNKRKAEL 628
SEKL+++VQII+KRN LFQ +DEIEVDIDS D ETLWEL +VTNY+KS+ KN+R+AE+
Sbjct: 270 SEKLESVVQIIRKRNPGLFQQEDEIEVDIDSFDNETLWELHGYVTNYQKSMGKNEREAEV 329
Query: 629 ANQARAVAQQNVQQQTPAPVVTEVRKEIRTDDRIGSTSSPVQVEKQ 674
A Q R A + E KE+ + S SSPV+ +Q
Sbjct: 330 ALQGREEAGHKMLGTNMTSATAEAPKELGSVQMTVSASSPVKDHRQ 375
>gi|295828222|gb|ADG37780.1| AT1G06230-like protein [Neslia paniculata]
Length = 210
Score = 305 bits (781), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 151/213 (70%), Positives = 176/213 (82%), Gaps = 5/213 (2%)
Query: 267 VDNGIKRGHSEVASVGVPVTRVGITRPSRPLNQLSISTVENSLGLSENVEKEKRTPKANQ 326
++NG R S AS G+P + R RP+NQLSIS +EN+ G+ E+VEKEKRTPKANQ
Sbjct: 3 INNGGGRILSGFASAGLPRE---VIRAPRPVNQLSISVLENTQGVHEHVEKEKRTPKANQ 59
Query: 327 FYRNSEFLLAKDKFPPAESNKKSKLNGKKQAGNELAHGFGTGSKIFKSCSALLEKLMKHK 386
FYR SEFLL DK PPAESNKKSK + KK G ++ HGFG GSK+FK+CSALLE+LMKHK
Sbjct: 60 FYRTSEFLLG-DKLPPAESNKKSKSSAKKHGG-DVGHGFGAGSKVFKNCSALLERLMKHK 117
Query: 387 HGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMT 446
HGWVFNAPVDVK LGLHDYFTII HPMDLGT+K+ L KN YKSP+EFA+DVRLTFHNAMT
Sbjct: 118 HGWVFNAPVDVKGLGLHDYFTIIEHPMDLGTIKSALTKNMYKSPREFADDVRLTFHNAMT 177
Query: 447 YNPKGQDVHIMAEQLLKIFEDKWVVIESEYNRE 479
YNP GQDVH+MAE LL+IFE++W VIE++YNRE
Sbjct: 178 YNPAGQDVHVMAETLLQIFEERWAVIEADYNRE 210
>gi|295828216|gb|ADG37777.1| AT1G06230-like protein [Capsella grandiflora]
Length = 210
Score = 304 bits (779), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 150/213 (70%), Positives = 175/213 (82%), Gaps = 5/213 (2%)
Query: 267 VDNGIKRGHSEVASVGVPVTRVGITRPSRPLNQLSISTVENSLGLSENVEKEKRTPKANQ 326
++NG R S AS G+P + R RP+NQLSIS +EN+ G+ E+VEKEKRTPKANQ
Sbjct: 3 INNGGGRILSGFASAGLPRE---VIRAPRPVNQLSISVLENTQGVHEHVEKEKRTPKANQ 59
Query: 327 FYRNSEFLLAKDKFPPAESNKKSKLNGKKQAGNELAHGFGTGSKIFKSCSALLEKLMKHK 386
FYR SEFLL DK PPAES KKSK + KK G ++ HGFG GSK+FK+CSALLE+LMKHK
Sbjct: 60 FYRTSEFLLG-DKLPPAESXKKSKSSAKKHGG-DVGHGFGAGSKVFKNCSALLERLMKHK 117
Query: 387 HGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMT 446
HGWVFNAPVDVK LGLHDYFTII HPMDLGT+K+ L KN YKSP+EFA+DVRLTFHNAMT
Sbjct: 118 HGWVFNAPVDVKGLGLHDYFTIIEHPMDLGTIKSALTKNMYKSPREFADDVRLTFHNAMT 177
Query: 447 YNPKGQDVHIMAEQLLKIFEDKWVVIESEYNRE 479
YNP GQDVH+MAE LL+IFE++W VIE++YNRE
Sbjct: 178 YNPAGQDVHLMAETLLQIFEERWAVIEADYNRE 210
>gi|295828210|gb|ADG37774.1| AT1G06230-like protein [Capsella grandiflora]
gi|295828220|gb|ADG37779.1| AT1G06230-like protein [Capsella grandiflora]
Length = 210
Score = 304 bits (779), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 151/213 (70%), Positives = 176/213 (82%), Gaps = 5/213 (2%)
Query: 267 VDNGIKRGHSEVASVGVPVTRVGITRPSRPLNQLSISTVENSLGLSENVEKEKRTPKANQ 326
++NG R S AS G+P + R RP+NQLSIS +EN+ G+ E+VEKEKRTPKANQ
Sbjct: 3 INNGGGRILSGFASAGLPRE---VIRAPRPVNQLSISVLENTQGVHEHVEKEKRTPKANQ 59
Query: 327 FYRNSEFLLAKDKFPPAESNKKSKLNGKKQAGNELAHGFGTGSKIFKSCSALLEKLMKHK 386
FYR SEFLL DK PPAESNKKSK + KK G ++ HGFG GSK+FK+CSALLE+LMKHK
Sbjct: 60 FYRTSEFLLG-DKLPPAESNKKSKSSAKKHGG-DVGHGFGAGSKVFKNCSALLERLMKHK 117
Query: 387 HGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMT 446
HGWVFNAPVDVK LGLHDYFTII HPMDLGT+K+ L KN YKSP+EFA+DVRLTFHNAMT
Sbjct: 118 HGWVFNAPVDVKGLGLHDYFTIIEHPMDLGTIKSALTKNMYKSPREFADDVRLTFHNAMT 177
Query: 447 YNPKGQDVHIMAEQLLKIFEDKWVVIESEYNRE 479
YNP GQDVH+MAE LL+IFE++W VIE++YNRE
Sbjct: 178 YNPAGQDVHLMAETLLQIFEERWAVIEADYNRE 210
>gi|295828214|gb|ADG37776.1| AT1G06230-like protein [Capsella grandiflora]
gi|295828218|gb|ADG37778.1| AT1G06230-like protein [Capsella grandiflora]
Length = 210
Score = 304 bits (779), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 151/213 (70%), Positives = 176/213 (82%), Gaps = 5/213 (2%)
Query: 267 VDNGIKRGHSEVASVGVPVTRVGITRPSRPLNQLSISTVENSLGLSENVEKEKRTPKANQ 326
++NG R S AS G+P + R RP+NQLSIS +EN+ G+ E+VEKEKRTPKANQ
Sbjct: 3 INNGGGRILSGFASAGLPRE---VIRAPRPVNQLSISVLENTQGVHEHVEKEKRTPKANQ 59
Query: 327 FYRNSEFLLAKDKFPPAESNKKSKLNGKKQAGNELAHGFGTGSKIFKSCSALLEKLMKHK 386
FYR SEFLL DK PPAESNKKSK + KK G ++ HGFG GSK+FK+CSALLE+LMKHK
Sbjct: 60 FYRTSEFLLG-DKLPPAESNKKSKSSAKKHGG-DVGHGFGAGSKVFKNCSALLERLMKHK 117
Query: 387 HGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMT 446
HGWVFNAPVDVK LGLHDYFTII HPMDLGT+K+ L KN YKSP+EFA+DVRLTFHNAMT
Sbjct: 118 HGWVFNAPVDVKGLGLHDYFTIIEHPMDLGTIKSALTKNXYKSPREFADDVRLTFHNAMT 177
Query: 447 YNPKGQDVHIMAEQLLKIFEDKWVVIESEYNRE 479
YNP GQDVH+MAE LL+IFE++W VIE++YNRE
Sbjct: 178 YNPAGQDVHLMAETLLQIFEERWAVIEADYNRE 210
>gi|295828212|gb|ADG37775.1| AT1G06230-like protein [Capsella grandiflora]
Length = 210
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 151/213 (70%), Positives = 176/213 (82%), Gaps = 5/213 (2%)
Query: 267 VDNGIKRGHSEVASVGVPVTRVGITRPSRPLNQLSISTVENSLGLSENVEKEKRTPKANQ 326
++NG R S AS G+P + R RP+NQLSIS +EN+ G+ E+VEKEKRTPKANQ
Sbjct: 3 INNGGGRILSGFASAGLPRE---VIRAPRPVNQLSISVLENTQGVHEHVEKEKRTPKANQ 59
Query: 327 FYRNSEFLLAKDKFPPAESNKKSKLNGKKQAGNELAHGFGTGSKIFKSCSALLEKLMKHK 386
FYR SEFLL DK PPAESNKKSK + KK G ++ HGFG GSK+FK+CSALLE+LMKHK
Sbjct: 60 FYRTSEFLLG-DKLPPAESNKKSKSSAKKHGG-DVGHGFGAGSKVFKNCSALLERLMKHK 117
Query: 387 HGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMT 446
HGWVFNAPVDVK LGLHDYFTII HPMDLGT+K+ L KN YKSP+EFA+DVRLTFHNAMT
Sbjct: 118 HGWVFNAPVDVKGLGLHDYFTIIEHPMDLGTIKSALTKNIYKSPREFADDVRLTFHNAMT 177
Query: 447 YNPKGQDVHIMAEQLLKIFEDKWVVIESEYNRE 479
YNP GQDVH+MAE LL+IFE++W VIE++YNRE
Sbjct: 178 YNPAGQDVHLMAETLLQIFEERWAVIEADYNRE 210
>gi|224116690|ref|XP_002317367.1| global transcription factor group [Populus trichocarpa]
gi|222860432|gb|EEE97979.1| global transcription factor group [Populus trichocarpa]
Length = 347
Score = 295 bits (755), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 155/278 (55%), Positives = 183/278 (65%), Gaps = 31/278 (11%)
Query: 371 IFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSP 430
+ K C LL KLMKH++GWVFN PVDVK L LHDYF II+HPMDLGTVK+RL+KNWYKSP
Sbjct: 76 LVKECGELLGKLMKHQYGWVFNVPVDVKMLKLHDYFKIIKHPMDLGTVKSRLSKNWYKSP 135
Query: 431 KEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEMGF 490
KEFAEDVRLTF+NAM YN KGQDVH MA+ LLKIFE+ W ++E N + R Y+
Sbjct: 136 KEFAEDVRLTFNNAMKYNEKGQDVHTMADTLLKIFEENWANFKAETNFDKRGEMGYDASL 195
Query: 491 HTPTSRKA----------------PPLPPPLDM-----RRILDRSESIT---HPMDSRLK 526
TP S++A P P P R L ++S+T HP
Sbjct: 196 QTPASKRASGPHASSPACGSASACAPSPAPFQQTMPLETRTLGGTDSLTELGHP------ 249
Query: 527 PISTTPSSRTPAPKKPKAKDPHKRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSL 586
+ R KKPK KD K MTY+EKQKLS +LQSLPSEKL+++VQII+KRN L
Sbjct: 250 NMKAADQGRASVSKKPK-KDTDKSKMTYEEKQKLSISLQSLPSEKLESVVQIIRKRNPGL 308
Query: 587 FQHDDEIEVDIDSVDAETLWELDRFVTNYKKSLSKNKR 624
FQ +DEIEVDIDS D ETLWEL VTNY+KS+SKN R
Sbjct: 309 FQQEDEIEVDIDSFDNETLWELHSNVTNYRKSISKNDR 346
>gi|297842055|ref|XP_002888909.1| hypothetical protein ARALYDRAFT_316265 [Arabidopsis lyrata subsp.
lyrata]
gi|297334750|gb|EFH65168.1| hypothetical protein ARALYDRAFT_316265 [Arabidopsis lyrata subsp.
lyrata]
Length = 449
Score = 285 bits (729), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 166/348 (47%), Positives = 215/348 (61%), Gaps = 31/348 (8%)
Query: 342 PAESNKKSKLNGKKQAGNELAHGFGTGS--KIFKSCSALLEKLMKHKHGWVFNAPVDVKN 399
P + K NG K++G HG G +I KSC+ LL KLMKHK GWVFN PVD
Sbjct: 86 PVPNKKLKTANGGKKSG---VHGAGDKGTVQILKSCNNLLTKLMKHKSGWVFNTPVDAVR 142
Query: 400 LGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAE 459
LGLHDY TI+ PMDLGTVKTRL+K+WYKSP EFAEDVRLTF+NAM YNP G DVH MAE
Sbjct: 143 LGLHDYHTIVEKPMDLGTVKTRLSKSWYKSPLEFAEDVRLTFNNAMLYNPVGHDVHHMAE 202
Query: 460 QLLKIFEDKWVVIESEY---NREMRIGADYEMGFHTPTSRKAPPLPPPLDMR-------- 508
LL +FE+KW +E++Y NR+ + D ++ H P S + P
Sbjct: 203 FLLNLFEEKWAPLETQYGLLNRKQQPVRDIDL--HAPVSTNTHNIEPFPLPPPPPPTVVE 260
Query: 509 -RILDRSESITHPMDSRLKPISTTPSSRTPAPKKPKAKDPHKRDMTYDEKQKLSTNLQSL 567
R L+R+ESIT+P+ + P+ P+KP + RD+T+DEK++LS +LQ L
Sbjct: 261 NRTLERAESITNPVKPAVLPV---------VPEKPVEEASADRDLTFDEKRRLSEDLQDL 311
Query: 568 PSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWELDRFVTNYKKSLSKNKRKAE 627
P +KL+ +VQIIKK N L Q DDEIE+DIDS+D ETLWEL RFVT YK+ SK K +
Sbjct: 312 PYDKLEAVVQIIKKSNPELSQQDDEIELDIDSLDLETLWELYRFVTEYKERSSKKKEEHG 371
Query: 628 LANQARAVAQQNVQQQTPAPVVTEVRKEIRTDDRIGSTSSPVQVEKQV 675
L ++ A + N Q+ P +VT + T+ +G +SPV+ E V
Sbjct: 372 LDSERDAESFHNSVQE-PNTLVTGLESSKVTE--LGHVASPVRQEVNV 416
Score = 46.6 bits (109), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 87/181 (48%), Gaps = 36/181 (19%)
Query: 211 VKISLGSSTKREMREIRKKLEIELDTVRSLVKRIEA------KEVQISGGVSNSGVLPVS 264
+KISL S +K E+R +++KL+ EL+ VRSL+KR+E K+++ + G SGV
Sbjct: 48 MKISLSSISKLEVRNLKRKLQAELEEVRSLIKRLEPQAPVPNKKLKTANGGKKSGVHGAG 107
Query: 265 D------------VVDNGIKRGHSEVASVGVPVTRVGI----TRPSRPLN------QLSI 302
D ++ +K V + V R+G+ T +P++ +LS
Sbjct: 108 DKGTVQILKSCNNLLTKLMKHKSGWVFNTPVDAVRLGLHDYHTIVEKPMDLGTVKTRLSK 167
Query: 303 STVENSLGLSENVE-----KEKRTPKANQFYRNSEFL--LAKDKFPPAESNKKSKLNGKK 355
S ++ L +E+V P + + +EFL L ++K+ P E+ + LN K+
Sbjct: 168 SWYKSPLEFAEDVRLTFNNAMLYNPVGHDVHHMAEFLLNLFEEKWAPLET-QYGLLNRKQ 226
Query: 356 Q 356
Q
Sbjct: 227 Q 227
>gi|168003377|ref|XP_001754389.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694491|gb|EDQ80839.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 694
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 191/434 (44%), Positives = 242/434 (55%), Gaps = 51/434 (11%)
Query: 221 REMR-EIRKKLEIELDTVRSLVKRIEAK-EVQISGGVSNSGVLPVSDVVDNG-------- 270
RE R E+RKKL+ L+ VR++ +IEA EV G G+ S G
Sbjct: 72 REQRSELRKKLKRGLEEVRTVGCKIEAWLEVLAKGRQRAGGLGSESKQHSQGSEAKSGRG 131
Query: 271 --IKRGHSEVASV-GVPVTRVGIT----------RPSRPLNQLSISTVENSLGLSENVEK 317
+G EVASV P + G T R +R Q S++ E S G EK
Sbjct: 132 AETWQGRKEVASVVSDPASSSGETPRDMPKEMSQREARLARQASVAVPEASGGTPS--EK 189
Query: 318 EKRTPKANQFYRNSEFLLAKDKFPPAESNK-------KSKLNGK--KQAGNELAHGFGTG 368
KRTPKAN Y NSEF+ KDK P E K K L+G+ ++ E A G G
Sbjct: 190 MKRTPKANALYVNSEFVSGKDKMPAPEKAKAKRGVGEKGTLDGRDPRRQKVEAARGKRMG 249
Query: 369 SKIFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
++ K C LL KLM HKHGWVFN PVD + LGLHDY +II+ PMDLGT+K +L+ Y
Sbjct: 250 -EMLKQCMTLLRKLMTHKHGWVFNEPVDAEKLGLHDYHSIIKKPMDLGTIKKKLHLKQYA 308
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNRE-MRIGADYE 487
SP EF ED+RLTF NAMTYNP G DV++MAE L +FE+ W + + E R G + E
Sbjct: 309 SPLEFGEDIRLTFSNAMTYNPVGHDVYVMAELLKNMFEEWWKNMGRKVEEERRRCGKEEE 368
Query: 488 MGFHTPTSRKAPPLPPPLDMRRILDRSESITHPMDSRLKPISTTPSSRTPAPKKPKAKDP 547
M + S + ++RR S+T SSR + KP+ ++
Sbjct: 369 MLANDEDS-----VEESGEVRRGERDVVSLTR----------GKASSRMGSQPKPRPEEV 413
Query: 548 HKRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWE 607
KR MT++EK+KLS NL+ LP +KL+ IVQIIKKRN L Q++DEIEVDIDS D +TLWE
Sbjct: 414 GKRAMTFEEKRKLSVNLERLPGDKLERIVQIIKKRNPDLGQNEDEIEVDIDSFDNDTLWE 473
Query: 608 LDRFVTNYKKSLSK 621
LDRFVTNY KS K
Sbjct: 474 LDRFVTNYMKSRGK 487
>gi|15219397|ref|NP_177458.1| bromodomain-containing protein GTE3 [Arabidopsis thaliana]
gi|75194105|sp|Q9S7T1.1|GTE3_ARATH RecName: Full=Transcription factor GTE3, chloroplastic; AltName:
Full=Bromodomain-containing protein GTE3; AltName:
Full=Protein GLOBAL TRANSCRIPTION FACTOR GROUP E3;
Flags: Precursor
gi|5903104|gb|AAD55662.1|AC008017_35 Highly similar to non intermediate filament IFA binding protein
[Arabidopsis thaliana]
gi|12324313|gb|AAG52122.1|AC010556_4 hypothetical protein; 61711-63380 [Arabidopsis thaliana]
gi|56236042|gb|AAV84477.1| At1g73150 [Arabidopsis thaliana]
gi|332197298|gb|AEE35419.1| bromodomain-containing protein GTE3 [Arabidopsis thaliana]
Length = 461
Score = 280 bits (715), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 156/317 (49%), Positives = 199/317 (62%), Gaps = 26/317 (8%)
Query: 340 FPPAESNKKSKLNGKKQAGNELAHGFGTGSKIFKSCSALLEKLMKHKHGWVFNAPVDVKN 399
F P + K NG K+ G A +I KSC+ LL KLMKHK GW+FN PVDV
Sbjct: 88 FAPVPNKKLKTANGGKKGGVHGAAADKGTVQILKSCNNLLTKLMKHKSGWIFNTPVDVVT 147
Query: 400 LGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAE 459
LGLHDY II+ PMDLGTVKTRL+K+ YKSP EFAEDVRLTF+NAM YNP G DV+ MAE
Sbjct: 148 LGLHDYHNIIKEPMDLGTVKTRLSKSLYKSPLEFAEDVRLTFNNAMLYNPVGHDVYHMAE 207
Query: 460 QLLKIFEDKWVVIESEYNREMRIGADY-EMGFHTPTSR-----KAPPLPPPLDMR----- 508
LL +FE+KWV +E++Y +R ++ FH P S +A PLP P
Sbjct: 208 ILLNLFEEKWVPLETQYELLIRKQQPVRDIDFHAPVSTNTHNVEALPLPAPTPSLSPPPP 267
Query: 509 ------RILDRSESITHPMDSRLKPISTTPSSRTPAPKKPKAKDPHKRDMTYDEKQKLST 562
R L+R+ES+T+P+ + P+ P+K + RD+T+DEK++LS
Sbjct: 268 PKVVENRTLERAESMTNPVKPAVLPV---------VPEKLVEEASANRDLTFDEKRQLSE 318
Query: 563 NLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWELDRFVTNYKKSLSKN 622
+LQ LP +KL+ +VQIIKKR L Q DDEIE+DIDS+D ETLWEL RFVT YK+SLSK
Sbjct: 319 DLQDLPYDKLEAVVQIIKKRTPELSQQDDEIELDIDSLDLETLWELFRFVTEYKESLSKK 378
Query: 623 KRKAELANQARAVAQQN 639
K + L ++ A + N
Sbjct: 379 KEEQGLDSERDAESFHN 395
Score = 42.4 bits (98), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 29/35 (82%)
Query: 211 VKISLGSSTKREMREIRKKLEIELDTVRSLVKRIE 245
+KISL S +K E+R +++KL+ EL+ VRSL+KR+E
Sbjct: 48 MKISLSSISKLEVRNLKRKLQAELEEVRSLIKRLE 82
>gi|345288391|gb|AEN80687.1| AT1G06230-like protein, partial [Capsella rubella]
gi|345288393|gb|AEN80688.1| AT1G06230-like protein, partial [Capsella rubella]
gi|345288395|gb|AEN80689.1| AT1G06230-like protein, partial [Capsella rubella]
gi|345288397|gb|AEN80690.1| AT1G06230-like protein, partial [Capsella rubella]
gi|345288399|gb|AEN80691.1| AT1G06230-like protein, partial [Capsella rubella]
gi|345288401|gb|AEN80692.1| AT1G06230-like protein, partial [Capsella rubella]
gi|345288403|gb|AEN80693.1| AT1G06230-like protein, partial [Capsella rubella]
gi|345288405|gb|AEN80694.1| AT1G06230-like protein, partial [Capsella rubella]
Length = 197
Score = 277 bits (708), Expect = 2e-71, Method: Composition-based stats.
Identities = 144/201 (71%), Positives = 165/201 (82%), Gaps = 5/201 (2%)
Query: 269 NGIKRGHSEVASVGVPVTRVGITRPSRPLNQLSISTVENSLGLSENVEKEKRTPKANQFY 328
NG R S AS G+P + R RP+NQLSIS +EN+ G+ E+VEKEKRTPKANQFY
Sbjct: 1 NGGGRILSGFASAGLPRE---VIRAPRPVNQLSISVLENTQGVHEHVEKEKRTPKANQFY 57
Query: 329 RNSEFLLAKDKFPPAESNKKSKLNGKKQAGNELAHGFGTGSKIFKSCSALLEKLMKHKHG 388
R SEFLL DK PPAESNKKSK + KK G ++ HGFG GSK+FK+CSALLE+LMKHKHG
Sbjct: 58 RTSEFLLG-DKLPPAESNKKSKSSAKKHGG-DVGHGFGAGSKVFKNCSALLERLMKHKHG 115
Query: 389 WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYN 448
WVFNAPVDVK LGLHDYFTII HPMDLGT+K+ L KN YKSP+EFA+DVRLTFHNAMTYN
Sbjct: 116 WVFNAPVDVKGLGLHDYFTIIEHPMDLGTIKSALTKNMYKSPREFADDVRLTFHNAMTYN 175
Query: 449 PKGQDVHIMAEQLLKIFEDKW 469
P GQDVH+MAE LL+IFE++W
Sbjct: 176 PAGQDVHLMAETLLQIFEERW 196
>gi|110736040|dbj|BAE99992.1| hypothetical protein [Arabidopsis thaliana]
Length = 461
Score = 276 bits (706), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 155/317 (48%), Positives = 198/317 (62%), Gaps = 26/317 (8%)
Query: 340 FPPAESNKKSKLNGKKQAGNELAHGFGTGSKIFKSCSALLEKLMKHKHGWVFNAPVDVKN 399
F P + K NG K+ G A +I KSC+ LL KLMKHK GW+FN PVDV
Sbjct: 88 FAPVPNKKLKTANGGKKGGVHGAAADKGTVQILKSCNNLLTKLMKHKSGWIFNTPVDVVT 147
Query: 400 LGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAE 459
LGLHDY II+ PMDL TVKTRL+K+ YKSP EFAEDVRLTF+NAM YNP G DV+ MAE
Sbjct: 148 LGLHDYHNIIKEPMDLETVKTRLSKSLYKSPLEFAEDVRLTFNNAMLYNPVGHDVYHMAE 207
Query: 460 QLLKIFEDKWVVIESEYNREMRIGADY-EMGFHTPTSR-----KAPPLPPPLDMR----- 508
LL +FE+KWV +E++Y +R ++ FH P S +A PLP P
Sbjct: 208 ILLNLFEEKWVPLETQYELLIRKQQPVRDIDFHAPVSTNTHNVEALPLPAPTPSLSPPPP 267
Query: 509 ------RILDRSESITHPMDSRLKPISTTPSSRTPAPKKPKAKDPHKRDMTYDEKQKLST 562
R L+R+ES+T+P+ + P+ P+K + RD+T+DEK++LS
Sbjct: 268 PKVVENRTLERAESMTNPVKPAVLPV---------VPEKLVEEASANRDLTFDEKRQLSE 318
Query: 563 NLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWELDRFVTNYKKSLSKN 622
+LQ LP +KL+ +VQIIKKR L Q DDEIE+DIDS+D ETLWEL RFVT YK+SLSK
Sbjct: 319 DLQDLPYDKLEAVVQIIKKRTPELSQQDDEIELDIDSLDLETLWELFRFVTEYKESLSKK 378
Query: 623 KRKAELANQARAVAQQN 639
K + L ++ A + N
Sbjct: 379 KEEQGLDSERDAESFHN 395
Score = 42.4 bits (98), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 29/35 (82%)
Query: 211 VKISLGSSTKREMREIRKKLEIELDTVRSLVKRIE 245
+KISL S +K E+R +++KL+ EL+ VRSL+KR+E
Sbjct: 48 MKISLSSISKLEVRNLKRKLQAELEEVRSLIKRLE 82
>gi|296088086|emb|CBI35445.3| unnamed protein product [Vitis vinifera]
Length = 564
Score = 271 bits (692), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 156/330 (47%), Positives = 203/330 (61%), Gaps = 38/330 (11%)
Query: 345 SNKKSKLNGKKQAGNELAHGFGTG----------SKIFKSCSALLEKLMKHKHGWVFNAP 394
+NK+ + N KK AGN+ F +G + + K C L KLMKHKH WVFN+P
Sbjct: 146 ANKQQRPNNKKIAGNKRPPPFDSGRGPKRSAAENASLMKLCGQTLTKLMKHKHSWVFNSP 205
Query: 395 VDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDV 454
VDV +GLHDY II+ PMDLGTVK+++ KN Y SP +FA DVRLTF NA+ YNPKG DV
Sbjct: 206 VDVVGMGLHDYHQIIKRPMDLGTVKSKIAKNLYDSPLDFAADVRLTFDNALLYNPKGHDV 265
Query: 455 HIMAEQLLKIFEDKWVVI-----ESEYNREMRIGADYEMGF--HTPT-SRKAPPLPPPLD 506
H+MAEQLL FED + + E E ++E I + + H PT R P P P+
Sbjct: 266 HVMAEQLLARFEDLFKPVYNKLEEDERDQERIIVGELQGSSWNHIPTPERLKKPSPKPVA 325
Query: 507 -----MRRILDRS--------ESITHPMDSR---LKPISTTPSS-RTPAPKKPKAKDPHK 549
M+ + + +S+ P R +KP++T PSS + P KPKAKDP+K
Sbjct: 326 KKPERMQVPIPATGSSNPPSVQSVPTPSPMRAPPVKPLATRPSSGKQP---KPKAKDPNK 382
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWELD 609
R+M+ +EK KL LQSLP EK+D +VQII K+N L Q DEIE+DI++VD ETLWELD
Sbjct: 383 REMSLEEKHKLGLGLQSLPQEKMDQVVQIISKKNGHLTQDGDEIELDIEAVDTETLWELD 442
Query: 610 RFVTNYKKSLSKNKRKAELANQARAVAQQN 639
R VTN+KK +SK KR+A + N A + N
Sbjct: 443 RLVTNWKKMVSKIKRQALMVNNNTAATEVN 472
>gi|449459556|ref|XP_004147512.1| PREDICTED: transcription factor GTE7-like [Cucumis sativus]
gi|449511376|ref|XP_004163939.1| PREDICTED: transcription factor GTE7-like [Cucumis sativus]
Length = 533
Score = 266 bits (680), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 159/376 (42%), Positives = 209/376 (55%), Gaps = 50/376 (13%)
Query: 342 PAESNKKSKLNGKKQA------GNELAHGFGTGSKIFKSCSALLEKLMKHKHGWVFNAPV 395
P K SK G K+ G EL + K+CS +L KLMKHKHGW+FN PV
Sbjct: 130 PKHQKKFSKTLGTKRPLPTSSNGMELKRSNSDNGNLLKACSQILTKLMKHKHGWIFNKPV 189
Query: 396 DVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVH 455
DV +GLHDY+ I++ PMDLG+VK +L K+ Y+SP +FA DVRLTF NAMTYNPKG DVH
Sbjct: 190 DVVGMGLHDYYDIVKRPMDLGSVKVKLGKDAYESPYDFASDVRLTFKNAMTYNPKGHDVH 249
Query: 456 IMAEQLLKIFEDKWVVIESEYNREMRIGADYEMGF------HTPTSRKAPPLPPPLD--M 507
MAEQLL FE+ + + E R Y+ H+ R D
Sbjct: 250 AMAEQLLVRFEELFRPVAEALEEEDRRFCGYQEELPASSWNHSEAERTVKK-----DNIQ 304
Query: 508 RRILDRSESITHPMDSRLKPISTTPSSRTPAP-----------KKPKAKDPHKRDMTYDE 556
++++ ++E + P S P+ +P +TP+P KP+AKDP+KR+MT +E
Sbjct: 305 KQVVKKTEPMKAPSSSSNPPMMQSP-VKTPSPLRAPPVKPLKQPKPRAKDPNKREMTLEE 363
Query: 557 KQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWELDRFVTNYK 616
K KL LQSLP EK++ +VQIIKKRN L Q DEIE+DI++VD ETLWELDR VTN+K
Sbjct: 364 KHKLGIGLQSLPPEKMEQVVQIIKKRNGHLKQDGDEIELDIEAVDTETLWELDRLVTNWK 423
Query: 617 KSLSKNKRKAELANQARAVAQQNVQQQTPAPVVTEVRKEIRT--------------DDRI 662
K +SK KR+A + A ++ V P P EV E + D+
Sbjct: 424 KMMSKIKRQALIT--AASMKPNGV---MPTPEKIEVGSETKKQRKGEAGEEDVDIGDEMP 478
Query: 663 GSTSSPVQVEKQVDNG 678
S PV++EK G
Sbjct: 479 ASNFPPVEIEKDAGGG 494
>gi|297850172|ref|XP_002892967.1| hypothetical protein ARALYDRAFT_312744 [Arabidopsis lyrata subsp.
lyrata]
gi|297338809|gb|EFH69226.1| hypothetical protein ARALYDRAFT_312744 [Arabidopsis lyrata subsp.
lyrata]
Length = 482
Score = 265 bits (676), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 153/338 (45%), Positives = 197/338 (58%), Gaps = 38/338 (11%)
Query: 350 KLNGKKQAGNELAHGFGTGS-KIFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTI 408
KL G + HG G+ +IFK+C++LL KLMKHK WVF+ PVD + LGLHDY I
Sbjct: 110 KLKTGNGGGKKSGHGAEKGTVQIFKNCNSLLTKLMKHKCAWVFHVPVDAEGLGLHDYHNI 169
Query: 409 IRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
++ PMDLGTVKT+L KN YKSP +FAEDVRLTF+NA+ YNP G DVH AE LL +FEDK
Sbjct: 170 VKEPMDLGTVKTKLGKNLYKSPLDFAEDVRLTFNNAILYNPVGHDVHRFAELLLNMFEDK 229
Query: 469 WVVIESEY-NREMRIGADYEMGFHTPTSRKAPPLPPPLDMRR------------------ 509
WV IE +Y N + ++ F P S AP + P +
Sbjct: 230 WVSIEMQYDNLHRKFKPTRDIEFPAPASTIAPIVEPLPAVPTPPSPSPPPPPQPPVLENT 289
Query: 510 ILDRSESITHPMDSRLKPISTTPSSRTPAPKKPKAKDP--HKRDMTYDEKQKLSTNLQSL 567
+R ES+T P++ P + T AP K + ++ + RD+T +EK++LS LQ L
Sbjct: 290 TWEREESMTIPVE---------PEAVTTAPDKAEEEEAPVNNRDLTLEEKRRLSEELQDL 340
Query: 568 PSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWELDRFVTNYKKSLSKNKRKAE 627
P +KL+ +VQIIKK N L Q DDEIE+DIDS+D TLWEL RFVT YK+SLSK
Sbjct: 341 PYDKLETVVQIIKKSNPELSQQDDEIELDIDSLDINTLWELYRFVTGYKESLSKKNEAQG 400
Query: 628 LANQARAVAQQNVQQQTPAPV-------VTEVRKEIRT 658
++ A + N Q+ V VTE K IRT
Sbjct: 401 FGSERDAESVHNSIQEPTTLVTGTNTSRVTESGKAIRT 438
Score = 44.3 bits (103), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 33/45 (73%), Gaps = 1/45 (2%)
Query: 211 VKISLGSSTKREMREIRKKLEIELDTVRSLVKRIEAKEVQISGGV 255
+KISL S +K E+R +++KL+ ELD VRSL+KR + EV + G +
Sbjct: 53 LKISLSSISKLELRNLKRKLKSELDEVRSLIKRFDP-EVNLGGNI 96
>gi|356549487|ref|XP_003543125.1| PREDICTED: uncharacterized protein LOC100802622 [Glycine max]
Length = 531
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 149/329 (45%), Positives = 195/329 (59%), Gaps = 40/329 (12%)
Query: 335 LAKDKFPPAES--NKKSKLNGKKQAGN----------ELAHGFGTGSKIFKSCSALLEKL 382
+ +F P +S K +GKK +GN +L + K CS +L+KL
Sbjct: 103 IGSSEFQPGQSLNGHPKKPSGKKISGNKRPLPSNSAKDLKRSHSEVGNLMKCCSQVLQKL 162
Query: 383 MKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFH 442
+KHKHGWVF APVDV L LHDY II+ PMDLGTVK+ L+KN Y +P +FA DVRLTF+
Sbjct: 163 IKHKHGWVFKAPVDVVGLKLHDYCDIIKQPMDLGTVKSNLSKNVYATPADFASDVRLTFN 222
Query: 443 NAMTYNPKGQDVHIMAEQLLKIFEDKW----------VVIESEYNREMRIGADYEMGFHT 492
NA+ YNPKG DV+ MAEQLL FE+ + +V + E E++ + +
Sbjct: 223 NALAYNPKGHDVYTMAEQLLARFEELYRPVHEKFEGSIVHDRESEEELQ-ASSWSQVEPE 281
Query: 493 PTSRKAPPLPPPLDMRRILDRSESITHPMDSRLKPISTTPSSRTPAP-----------KK 541
+K P+PP L + HP S P+ +P RTP+P K
Sbjct: 282 RVKKKENPIPP-----AKLHKEPPPQHPASSSNPPLVQSP-VRTPSPMRAPPVKPLKQPK 335
Query: 542 PKAKDPHKRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVD 601
PKAKDP+KRDM+ +EK KL LQSLP EK++ +VQII++RN L Q DEIE+DI++VD
Sbjct: 336 PKAKDPNKRDMSLEEKHKLGLGLQSLPPEKMEQVVQIIRRRNGHLKQDGDEIELDIEAVD 395
Query: 602 AETLWELDRFVTNYKKSLSKNKRKAELAN 630
ETLWELDR VTNYKK +SK KR+A + N
Sbjct: 396 TETLWELDRLVTNYKKMVSKIKRQALMGN 424
>gi|359475584|ref|XP_003631709.1| PREDICTED: transcription factor GTE2-like [Vitis vinifera]
Length = 561
Score = 263 bits (671), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 156/337 (46%), Positives = 201/337 (59%), Gaps = 54/337 (16%)
Query: 345 SNKKSKLNGKKQAGNELAHGFGTG----------SKIFKSCSALLEKLMKHKHGWVFNAP 394
+NK+ + N KK AGN+ F +G + + K C L KLMKHKH WVFN+P
Sbjct: 134 ANKQQRPNNKKIAGNKRPPPFDSGRGPKRSAAENASLMKLCGQTLTKLMKHKHSWVFNSP 193
Query: 395 VDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDV 454
VDV +GLHDY II+ PMDLGTVK+++ KN Y SP +FA DVRLTF NA+ YNPKG DV
Sbjct: 194 VDVVGMGLHDYHQIIKRPMDLGTVKSKIAKNLYDSPLDFAADVRLTFDNALLYNPKGHDV 253
Query: 455 HIMAEQLLKIFEDKWVVI-----ESEYNREMRI---------------GADYEMGF---H 491
H+MAEQLL FED + + E E ++E I G + G H
Sbjct: 254 HVMAEQLLARFEDLFKPVYNKLEEDERDQERIIVGGGRGGVSAIAGTSGGEELQGSSWNH 313
Query: 492 TPT-SRKAPPLPPPL-----DMRRILDRS--------ESITHPMDSR---LKPISTTPSS 534
PT R P P P+ M+ + + +S+ P R +KP++T PSS
Sbjct: 314 IPTPERLKKPSPKPVAKKPERMQVPIPATGSSNPPSVQSVPTPSPMRAPPVKPLATRPSS 373
Query: 535 -RTPAPKKPKAKDPHKRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEI 593
+ P KPKAKDP+KR+M+ +EK KL LQSLP EK+D +VQII K+N L Q DEI
Sbjct: 374 GKQP---KPKAKDPNKREMSLEEKHKLGLGLQSLPQEKMDQVVQIISKKNGHLTQDGDEI 430
Query: 594 EVDIDSVDAETLWELDRFVTNYKKSLSKNKRKAELAN 630
E+DI++VD ETLWELDR VTN+KK +SK KR+A + N
Sbjct: 431 ELDIEAVDTETLWELDRLVTNWKKMVSKIKRQALMVN 467
>gi|356554832|ref|XP_003545746.1| PREDICTED: uncharacterized protein LOC100819363 [Glycine max]
Length = 529
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 138/286 (48%), Positives = 174/286 (60%), Gaps = 39/286 (13%)
Query: 371 IFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSP 430
+ K CS +L+KLMKHKHGWVFNAPVD+ L LHDY II+ PMDLGTVK+ L+KN Y +P
Sbjct: 148 LMKCCSQVLQKLMKHKHGWVFNAPVDIVGLKLHDYCDIIKQPMDLGTVKSNLSKNVYATP 207
Query: 431 KEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEY------NREMRIGA 484
+FA DVRLTF+NA+ YNPKG DV+ MAEQLL FE+ + + ++ +RE
Sbjct: 208 ADFASDVRLTFNNALAYNPKGHDVYTMAEQLLARFEELYRPVHEKFEGSISHDRESEEEL 267
Query: 485 DYEMGFHTPTSR----------------KAPPLPPPLDMRRILDRSESITHPMDSRLKPI 528
H R + PPLPP + S P+ P+
Sbjct: 268 QASSWSHVEPERVKKKEKPPPPPPAKLQQEPPLPP----------ASSSNPPLLQ--SPV 315
Query: 529 STTPSSRTPAPK-----KPKAKDPHKRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRN 583
T R P K KPKAKDP+KRDM+ +EK KL LQSLP EK++ +VQII++RN
Sbjct: 316 RTPSPMRVPPVKPLKQPKPKAKDPNKRDMSLEEKHKLGLGLQSLPPEKMEQVVQIIRRRN 375
Query: 584 SSLFQHDDEIEVDIDSVDAETLWELDRFVTNYKKSLSKNKRKAELA 629
L Q DEIE+DI++VD ETLWELDR VTNYKK +SK KR+A +
Sbjct: 376 GHLKQDGDEIELDIEAVDTETLWELDRLVTNYKKMVSKIKRQALMG 421
>gi|112292667|gb|ABI14812.1| chloroplast bromodomain-containing protein [Pachysandra terminalis]
Length = 428
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 140/295 (47%), Positives = 179/295 (60%), Gaps = 43/295 (14%)
Query: 369 SKIFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
S + K C +L KLM+HKHGW+FN PVDV +GLHDY II+HPMDLGTVK + KN Y
Sbjct: 34 SSMMKQCGQILTKLMRHKHGWIFNVPVDVVGMGLHDYNQIIKHPMDLGTVKLNIGKNLYS 93
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLL----KIFEDKWVVIESEYNREMRIGA 484
SP +FA DVRLTF+NA++YNPKG DV+ MAEQLL ++FE + E R++ G
Sbjct: 94 SPLDFASDVRLTFNNALSYNPKGHDVYAMAEQLLVRFEEMFEPAYKKFEDAQQRKISAGE 153
Query: 485 DYEMGFHTPTSRKAPPLPPPLDMRRILD-----RSESITHPMDSRLKPIST--------- 530
+ P+P + R L R HPM P+ST
Sbjct: 154 IRRSSWSHQI-----PMPESIPNRDPLSSSAATRPGGFAHPM-----PLSTPQPQAFPQA 203
Query: 531 --TPSSRTPAPK-------------KPKAKDPHKRDMTYDEKQKLSTNLQSLPSEKLDNI 575
+ S+ PAPK KPKAKDP+KR+M+++EK KL +LQSLP EK++ +
Sbjct: 204 LASTSAPAPAPKPFMAMRSATVKQPKPKAKDPNKREMSFEEKHKLGLSLQSLPQEKMEQV 263
Query: 576 VQIIKKRNSSLFQHDDEIEVDIDSVDAETLWELDRFVTNYKKSLSKNKRKAELAN 630
VQII+KRN L Q DEIE+DI+ VD ETLWELDRFV N KK +SK KR+A ++N
Sbjct: 264 VQIIRKRNGHLAQDGDEIELDIEVVDTETLWELDRFVYNCKKLMSKIKRQALVSN 318
>gi|18394534|ref|NP_564037.1| DNA-binding bromodomain-containing protein [Arabidopsis thaliana]
gi|75151921|sp|Q8H1D7.1|GTE5_ARATH RecName: Full=Transcription factor GTE5, chloroplastic; AltName:
Full=Bromodomain-containing protein GTE5; AltName:
Full=Protein GLOBAL TRANSCRIPTION FACTOR GROUP E5;
Flags: Precursor
gi|23297757|gb|AAN13019.1| unknown protein [Arabidopsis thaliana]
gi|332191516|gb|AEE29637.1| DNA-binding bromodomain-containing protein [Arabidopsis thaliana]
Length = 487
Score = 251 bits (642), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 147/334 (44%), Positives = 191/334 (57%), Gaps = 39/334 (11%)
Query: 357 AGNELAHGFGTGS-KIFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDL 415
G + HG G+ +IFK+C++LL KLMKHK WVFN PVD K LGLHDY I++ PMDL
Sbjct: 117 GGKKSGHGADKGTVQIFKNCNSLLTKLMKHKSAWVFNVPVDAKGLGLHDYHNIVKEPMDL 176
Query: 416 GTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
GTVKT+L K+ YKSP +FAEDVRLTF+NA+ YNP G DV+ AE LL +FEDKWV IE +
Sbjct: 177 GTVKTKLGKSLYKSPLDFAEDVRLTFNNAILYNPIGHDVYRFAELLLNMFEDKWVSIEMQ 236
Query: 476 Y-NREMRIGADYEMGFHTPTSRKAPPLPPPLDMR-----------------------RIL 511
Y N + ++ F P AP + P + R
Sbjct: 237 YDNLHRKFKPTRDIEFPAPAPSIAPIVEPLPAIVPSPSPSSPPPPPPPPVAAPVLENRTW 296
Query: 512 DRSESITHPMDSRLKPISTTPSSRTPAPKKPKAKDPHKRDMTYDEKQKLSTNLQSLPSEK 571
+R ES+T P++ P + + ++ + RD+T +EK++LS LQ LP +K
Sbjct: 297 EREESMTIPVE----PEAVITAPEKAEEEEAPVNN---RDLTLEEKRRLSEELQDLPYDK 349
Query: 572 LDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWELDRFVTNYKKSLSKNKRKAELANQ 631
L+ +VQIIKK N L Q DDEIE+DIDS+D TLWEL RFVT YK+SLSK ++
Sbjct: 350 LETVVQIIKKSNPELSQKDDEIELDIDSLDINTLWELYRFVTGYKESLSKKNEAHGFGSE 409
Query: 632 ARAVAQQNVQQQTPAPV-------VTEVRKEIRT 658
A + N Q+ V VTE K IRT
Sbjct: 410 RDAESVHNSIQEPTTLVSGTTTSRVTESGKAIRT 443
Score = 45.8 bits (107), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Query: 211 VKISLGSSTKREMREIRKKLEIELDTVRSLVKRIEAKEVQISGGVSNSGVLPVSDVVDNG 270
+KISL S +K E+R +++KL+ ELD VRSL+KR + E G ++ SGV+ S V G
Sbjct: 56 LKISLSSISKLEVRNLKRKLKSELDEVRSLIKRFDP-EANPGGSMAKSGVVGRSKKVKTG 114
>gi|224056335|ref|XP_002298808.1| global transcription factor group [Populus trichocarpa]
gi|222846066|gb|EEE83613.1| global transcription factor group [Populus trichocarpa]
Length = 474
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 135/289 (46%), Positives = 188/289 (65%), Gaps = 34/289 (11%)
Query: 369 SKIFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
+++ K+CS +L KLMKHK G++FN+PVDV + LHDY II+ PMDLGTVK++L KN Y+
Sbjct: 171 AQLMKNCSQILSKLMKHKLGYIFNSPVDVVGMQLHDYHDIIKSPMDLGTVKSKLTKNLYE 230
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEM 488
SP++FA DVRLTF+NAM YNPKG +V+++AEQ L FED + I+ ++G D++
Sbjct: 231 SPRDFAADVRLTFNNAMKYNPKGHEVYMLAEQFLTRFEDFYRPIKE------KVGEDFDE 284
Query: 489 GFHTPTS----------RKAPPLPPPL--DMRRILDRSESITHPMDSR--LKP--ISTTP 532
+ R+ P + D ++ +S+ I H M + +P ++ P
Sbjct: 285 EENDQVQEVQASSWDHIRREPERVNQIDDDFMQVTAKSDPIGHQMHQQPLQQPTGLNQNP 344
Query: 533 S-SRTPAPK-----------KPKAKDPHKRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIK 580
+ RTP+P KPKAKDP+KR+M+ +EK KL LQSLP EK++ +VQII+
Sbjct: 345 NLVRTPSPMRMPQVKPVKQPKPKAKDPNKREMSLEEKHKLGVGLQSLPQEKMEQVVQIIR 404
Query: 581 KRNSSLFQHDDEIEVDIDSVDAETLWELDRFVTNYKKSLSKNKRKAELA 629
KRN L Q DEIE+DI++VD ETLWELDRFVTNYKK +SK KR+A +
Sbjct: 405 KRNGHLRQEGDEIELDIEAVDTETLWELDRFVTNYKKMVSKIKRQALMG 453
Score = 43.5 bits (101), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 45/81 (55%), Gaps = 15/81 (18%)
Query: 171 AASDDSSSLNRQQGGVVVAATTREAPSENGVVAVKSGDGRVKISLGSSTKREMREIRKKL 230
AASDD+SS+NR+ +N +G G V ++GS +K+E+ E++ +L
Sbjct: 64 AASDDASSINRR--------------PQNNHQDFNTG-GFVTFNVGSYSKKELIELKNRL 108
Query: 231 EIELDTVRSLVKRIEAKEVQI 251
EL+ +R L RIE+ E QI
Sbjct: 109 VHELEKIRDLKNRIESSESQI 129
>gi|449438275|ref|XP_004136914.1| PREDICTED: uncharacterized protein LOC101209352 [Cucumis sativus]
gi|449521741|ref|XP_004167888.1| PREDICTED: uncharacterized protein LOC101228592 [Cucumis sativus]
Length = 539
Score = 249 bits (637), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 140/306 (45%), Positives = 182/306 (59%), Gaps = 55/306 (17%)
Query: 360 ELAHGFGTGSKIFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVK 419
++ + F G+ + K+C+ +L KLMK K+G +FN PVDV LGLHDY+ II+HPMDLGTVK
Sbjct: 159 QVPNSFEVGN-LMKTCAQILNKLMKQKYGLIFNKPVDVVGLGLHDYYDIIKHPMDLGTVK 217
Query: 420 TRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNRE 479
+ L+KN Y SP +FAEDVRLTF+NAM YNPKG +VHI+AEQ L FE+ ++
Sbjct: 218 STLSKNLYDSPLDFAEDVRLTFNNAMRYNPKGHEVHILAEQWLVKFEEMFL--------- 268
Query: 480 MRIGADYEMGFHTPTSRKAPPLPPPLDMRRILDRSESITH---------------PMD-- 522
P SRK L P L +S S H P++
Sbjct: 269 -------------PVSRKLGALKQPDPYEEEL-QSSSWNHVEEVENVNFNSNGNKPVEVV 314
Query: 523 ---SRLKPISTTPSSRTPAP-----------KKPKAKDPHKRDMTYDEKQKLSTNLQSLP 568
S KP S RTP+P KPKAKDP+KRDM+ +EK +L LQ LP
Sbjct: 315 VPSSLTKPPSVQSPVRTPSPVRAPQVKPVKQPKPKAKDPNKRDMSLEEKHRLGIGLQGLP 374
Query: 569 SEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWELDRFVTNYKKSLSKNKRKAEL 628
EK+D ++QI+KKR+ L Q DEIE+DI++VD ETLWELDR VTN+KK +SK KR+A +
Sbjct: 375 PEKMDQVIQIVKKRSGHLRQDGDEIELDIEAVDTETLWELDRLVTNWKKMMSKVKRQALI 434
Query: 629 ANQARA 634
+ A
Sbjct: 435 NDNTNA 440
>gi|15810439|gb|AAL07107.1| unknown protein [Arabidopsis thaliana]
Length = 487
Score = 249 bits (636), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 146/334 (43%), Positives = 190/334 (56%), Gaps = 39/334 (11%)
Query: 357 AGNELAHGFGTGS-KIFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDL 415
G + HG G+ +IFK+C++LL KLMKHK WVFN PVD K LGLHDY I++ PMDL
Sbjct: 117 GGKKSGHGADKGTVQIFKNCNSLLTKLMKHKSAWVFNVPVDAKGLGLHDYHNIVKEPMDL 176
Query: 416 GTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
GTVK +L K+ YKSP +FAEDVRLTF+NA+ YNP G DV+ AE LL +FEDKWV IE +
Sbjct: 177 GTVKIKLGKSLYKSPLDFAEDVRLTFNNAILYNPIGHDVYRFAELLLNMFEDKWVSIEMQ 236
Query: 476 Y-NREMRIGADYEMGFHTPTSRKAPPLPPPLDMR-----------------------RIL 511
Y N + ++ F P AP + P + R
Sbjct: 237 YDNLHRKFKPTRDIEFPAPAPSIAPIVEPLPAIVPSPSPSSPPPPPPPPVAAPVLENRTW 296
Query: 512 DRSESITHPMDSRLKPISTTPSSRTPAPKKPKAKDPHKRDMTYDEKQKLSTNLQSLPSEK 571
+R ES+T P++ P + + ++ + RD+T +EK++LS LQ LP +K
Sbjct: 297 EREESMTIPVE----PEAVITAPEKAEEEEAPVNN---RDLTLEEKRRLSEELQDLPYDK 349
Query: 572 LDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWELDRFVTNYKKSLSKNKRKAELANQ 631
L+ +VQIIKK N L Q DDEIE+DIDS+D TLWEL RFVT YK+SLSK ++
Sbjct: 350 LETVVQIIKKSNPELSQKDDEIELDIDSLDINTLWELYRFVTGYKESLSKKNEAHGFGSE 409
Query: 632 ARAVAQQNVQQQTPAPV-------VTEVRKEIRT 658
A + N Q+ V VTE K IRT
Sbjct: 410 RDAESVHNSIQEPTTLVSGTTTSRVTESGKAIRT 443
Score = 45.8 bits (107), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Query: 211 VKISLGSSTKREMREIRKKLEIELDTVRSLVKRIEAKEVQISGGVSNSGVLPVSDVVDNG 270
+KISL S +K E+R +++KL+ ELD VRSL+KR + E G ++ SGV+ S V G
Sbjct: 56 LKISLSSISKLEVRNLKRKLKSELDEVRSLIKRFDP-EANPGGSMAKSGVVGRSKKVKTG 114
>gi|9665057|gb|AAF97259.1|AC034106_2 Contains similarity to female sterile homeotic-related protein
Frg-1 from Mus musculus gb|AF045462 and contains a
bromodomain PF|00439 [Arabidopsis thaliana]
Length = 440
Score = 248 bits (633), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 146/341 (42%), Positives = 195/341 (57%), Gaps = 40/341 (11%)
Query: 342 PAESNKKSKLNGKKQ-------AGNELAHGFGTGS-KIFKSCSALLEKLMKHKHGWVFNA 393
P S KS + G+ + G + HG G+ +IFK+C++LL KLMKHK WVFN
Sbjct: 95 PGGSMAKSGVVGRSKKVKTGNGGGKKSGHGADKGTVQIFKNCNSLLTKLMKHKSAWVFNV 154
Query: 394 PVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQD 453
PVD K LGLHDY I++ PMDLGTVKT+L K+ YKSP +FAEDVRLTF+NA+ YNP G D
Sbjct: 155 PVDAKGLGLHDYHNIVKEPMDLGTVKTKLGKSLYKSPLDFAEDVRLTFNNAILYNPIGHD 214
Query: 454 VHIMAEQLLKIFEDKWVVIESEY-NREMRIGADYEMGFHTPTSRKAPPLPPPLDMR---- 508
V+ AE LL +FEDKWV IE +Y N + ++ F P AP + P +
Sbjct: 215 VYRFAELLLNMFEDKWVSIEMQYDNLHRKFKPTRDIEFPAPAPSIAPIVEPLPAIVPSPS 274
Query: 509 -------------------RILDRSESITHPMDSRLKPISTTPSSRTPAPKKPKAKDPHK 549
R +R ES+T P++ P + + ++ +
Sbjct: 275 PSSPPPPPPPPVAAPVLENRTWEREESMTIPVE----PEAVITAPEKAEEEEAPVNN--- 327
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWELD 609
RD+T +EK++LS LQ LP +KL+ +VQIIKK N L Q DDEIE+DIDS+D TLWEL
Sbjct: 328 RDLTLEEKRRLSEELQDLPYDKLETVVQIIKKSNPELSQKDDEIELDIDSLDINTLWELY 387
Query: 610 RFVTNYKKSLSKNKRKAELANQARAVAQQNVQQQTPAPVVT 650
RFVT YK+SLSK ++ A + N Q+ P +V+
Sbjct: 388 RFVTGYKESLSKKNEAHGFGSERDAESVHNSIQE-PTTLVS 427
Score = 45.4 bits (106), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Query: 211 VKISLGSSTKREMREIRKKLEIELDTVRSLVKRIEAKEVQISGGVSNSGVLPVSDVVDNG 270
+KISL S +K E+R +++KL+ ELD VRSL+KR + E G ++ SGV+ S V G
Sbjct: 56 LKISLSSISKLEVRNLKRKLKSELDEVRSLIKRFDP-EANPGGSMAKSGVVGRSKKVKTG 114
>gi|350539095|ref|NP_001234374.1| PSTVd RNA-binding protein Virp1d [Solanum lycopersicum]
gi|10179602|gb|AAG13810.1|AF190891_1 PSTVd RNA-binding protein Virp1a [Solanum lycopersicum]
gi|10179604|gb|AAG13811.1|AF190892_1 PSTVd RNA-binding protein Virp1b [Solanum lycopersicum]
gi|10179606|gb|AAG13812.1|AF190893_1 PSTVd RNA-binding protein Virp1c [Solanum lycopersicum]
gi|10179608|gb|AAG13813.1|AF190894_1 PSTVd RNA-binding protein Virp1d [Solanum lycopersicum]
gi|13186132|emb|CAC33448.1| PSTVd RNA-biding protein, Virp1 [Solanum lycopersicum]
gi|13186134|emb|CAC33449.1| PSTVd RNA-biding protein, Virp1 [Solanum lycopersicum]
gi|13186136|emb|CAC33450.1| PSTVd RNA-biding protein, Virp1 [Solanum lycopersicum]
gi|13186138|emb|CAC33451.1| PSTVd RNA-biding protein, Virp1 [Solanum lycopersicum]
Length = 602
Score = 246 bits (629), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 141/303 (46%), Positives = 179/303 (59%), Gaps = 37/303 (12%)
Query: 364 GFGTGSKIFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLN 423
GT S + K C +L KLMKHK+GW+FN PVD + LGLHDY II+ PMDLGTVK+ L
Sbjct: 186 AIGTES-MMKECRQILAKLMKHKNGWIFNIPVDAEALGLHDYHQIIKRPMDLGTVKSNLA 244
Query: 424 KNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIG 483
KN+Y SP EFA DVRLTF+NA+ YNPK V+ AEQLL FED + ++ + N+
Sbjct: 245 KNFYPSPFEFAADVRLTFNNALLYNPKTDQVNAFAEQLLGRFEDMFRPLQDKMNKLEGGR 304
Query: 484 ADYE--------MGFHTPT-SRKAPPLPPPL-----DMRRILDRSESITHPMDS------ 523
DY H PT R P P P+ R+ + S + T +
Sbjct: 305 RDYHPVDELQGSSWNHIPTPERVKKPKPTPVPNISKKQERMQNHSSASTPSLPVPPPNPP 364
Query: 524 --RLKPISTTPSSRTPAPK--------------KPKAKDPHKRDMTYDEKQKLSTNLQSL 567
+ P+ST R PA K KP+AKDP+KR+M +EK KL LQSL
Sbjct: 365 ARQQSPLSTPSPVRAPAAKPQSAAKVPTMGKQPKPRAKDPNKREMNMEEKHKLGVGLQSL 424
Query: 568 PSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWELDRFVTNYKKSLSKNKRKAE 627
P EK+ +VQII+KRN L Q DEIE+DI+++D ETLWELDRFVTN+KK +SK KR+A
Sbjct: 425 PQEKMPQLVQIIRKRNEHLAQDGDEIELDIEALDTETLWELDRFVTNWKKMVSKTKRQAL 484
Query: 628 LAN 630
+ N
Sbjct: 485 MNN 487
>gi|356554838|ref|XP_003545749.1| PREDICTED: transcription factor GTE11-like [Glycine max]
Length = 536
Score = 246 bits (628), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 146/336 (43%), Positives = 188/336 (55%), Gaps = 53/336 (15%)
Query: 341 PPAESNKKSKLNGKKQAGN---ELAHGFGTGSKIFKSCSALLEKLMKHKHGWVFNAPVDV 397
P SNKK N + N +L + K CS +L+KLMKHKHGW+FNAPVDV
Sbjct: 121 PKKPSNKKVSGNKRPLPSNSATDLKRSHSEVGSLMKGCSQVLQKLMKHKHGWIFNAPVDV 180
Query: 398 KNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIM 457
L L DY+ +I+ PMDLGTVK+ L+ N Y +P +FA DVRLTF+NA+ YNPKG DV+ +
Sbjct: 181 VGLQLTDYYDVIKQPMDLGTVKSNLSMNKYTTPSDFASDVRLTFNNALAYNPKGHDVYTV 240
Query: 458 AEQLLKIFEDKWVVIESEYNREMRIGADYE--------MGFHTPTSR------------- 496
AE LL FE+ + + ++ E +G D E H R
Sbjct: 241 AELLLTRFEELYRPLHEKF--EGSVGHDRESEEELQASSWSHVEPERVKKKENPTPPPPP 298
Query: 497 ------KAPPLPPPLDMRRILDRSESITHPMDSRLKPISTTPSSRTPAPK-----KPKAK 545
+ PP PP + S P+ P+ T R P K KPKAK
Sbjct: 299 PPEKLQQEPPQPP----------ASSSNPPLLQ--SPVRTPSPMRAPPVKPLKQPKPKAK 346
Query: 546 DPHKRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETL 605
DP+KRDM+ +EK KL LQSLP EK++ +VQII++RN L Q DEIE+DI++VD ETL
Sbjct: 347 DPNKRDMSLEEKHKLGLGLQSLPPEKMEQVVQIIRRRNGHLKQDGDEIELDIEAVDTETL 406
Query: 606 WELDRFVTNYKKSLSKNKRKAELANQARAVAQQNVQ 641
WELDR VTNYKK +SK KR+A + N + NVQ
Sbjct: 407 WELDRLVTNYKKMVSKIKRQALMGN----IYNDNVQ 438
>gi|57282316|emb|CAD43284.1| bromodomain-containing RNA-binding protein 1 [Nicotiana
benthamiana]
Length = 615
Score = 245 bits (625), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 141/305 (46%), Positives = 182/305 (59%), Gaps = 47/305 (15%)
Query: 371 IFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSP 430
+ K C +L KLMKHK GW+FN PVD + LGLHDY II+ PMDLGTVK+ L+ +Y +P
Sbjct: 192 MMKECRQVLGKLMKHKSGWIFNTPVDAEALGLHDYHQIIKRPMDLGTVKSNLSNCFYPTP 251
Query: 431 KEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEMGF 490
EFA DVRLTF+NA+ YNPK VH AEQLL FED + I+ + N+ + G+D F
Sbjct: 252 FEFAADVRLTFNNALLYNPKTDQVHGFAEQLLARFEDMFRPIQDKLNK-LDGGSD-RRDF 309
Query: 491 H--------------TPTSRKAP-PLPPPL----DMRRILDRSESITHPMDS-------- 523
H TP K P P P P R + + S ++T P+
Sbjct: 310 HPTDELQGISWNHIPTPERVKKPKPTPAPHISKKQERMMQNHSSALTLPVQQPPDNTPVV 369
Query: 524 RLKPISTTPSS--RTPAPK----------------KPKAKDPHKRDMTYDEKQKLSTNLQ 565
R + + +TPS PAPK KP+AKDP+KR+M+ +EK KL LQ
Sbjct: 370 RQQSLLSTPSPVRAPPAPKPQSSVAAKVPPMGKQPKPRAKDPNKREMSMEEKHKLGVGLQ 429
Query: 566 SLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWELDRFVTNYKKSLSKNKRK 625
SLP EK+ +VQII+KRN L Q DEIE+DI+++D ETLWELDRFVTN+KK +SK KR+
Sbjct: 430 SLPQEKMPQLVQIIRKRNEHLAQDGDEIELDIEALDTETLWELDRFVTNWKKMVSKTKRQ 489
Query: 626 AELAN 630
A + N
Sbjct: 490 ALINN 494
>gi|57282320|emb|CAD43286.1| bromodomain-containing RNA-binding protein 1 [Nicotiana tabacum]
Length = 617
Score = 243 bits (619), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 138/308 (44%), Positives = 176/308 (57%), Gaps = 51/308 (16%)
Query: 371 IFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSP 430
+ K C +L KLMKHK GW+FN PVD K +GLHDY II+ PMDLGTVK+ L N+Y +P
Sbjct: 193 MMKECRQVLAKLMKHKSGWIFNTPVDAKAMGLHDYHQIIKRPMDLGTVKSNLINNFYPTP 252
Query: 431 KEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYN--------REMRI 482
EFA DVRLTF+NA+ YNPK VH AEQLL FED + I+ + N R+ R
Sbjct: 253 FEFAADVRLTFNNALLYNPKTDQVHGFAEQLLARFEDMFRPIQDKLNKLDGGTGRRDFRA 312
Query: 483 -----GADYEMGFHTPTS---RKAPPLPPPL---DMRRILDRSESITHPMDSRLKPISTT 531
G+ + H PT +K P P P R++ S + P +P
Sbjct: 313 IDELQGSSWN---HIPTPERVKKPKPTPAPHISKKQERMMQNHSSASTPSLPVQQPPDNP 369
Query: 532 PSSR------TPAP-----------------------KKPKAKDPHKRDMTYDEKQKLST 562
P R TP+P KP+AKDP+KR+M+ +EK KL
Sbjct: 370 PVVRQQSPLSTPSPVRAPPAAKPQSSVAAKVPPMGKQPKPRAKDPNKREMSMEEKHKLGV 429
Query: 563 NLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWELDRFVTNYKKSLSKN 622
LQSLP EK+ +VQII+KRN L Q DEIE+DI+++D ETLWELDRFVTN+KK +SK
Sbjct: 430 GLQSLPQEKMPQLVQIIRKRNEHLAQDGDEIELDIEALDTETLWELDRFVTNWKKMVSKT 489
Query: 623 KRKAELAN 630
KR+A + N
Sbjct: 490 KRQALINN 497
>gi|224103835|ref|XP_002313212.1| global transcription factor group [Populus trichocarpa]
gi|222849620|gb|EEE87167.1| global transcription factor group [Populus trichocarpa]
Length = 224
Score = 241 bits (614), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 126/256 (49%), Positives = 165/256 (64%), Gaps = 34/256 (13%)
Query: 371 IFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSP 430
+ K+CS +L KLMK K G++FN PVDV L LHDY II++PMDLGTVKT L+KN Y+SP
Sbjct: 1 LMKNCSQILSKLMKQKLGYIFNTPVDVVGLQLHDYHDIIKNPMDLGTVKTNLSKNLYESP 60
Query: 431 KEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEMGF 490
++FA DVRLTF+NAM YNPKG +V+I+AEQ L F+D + I+ + + + +
Sbjct: 61 RDFAADVRLTFNNAMKYNPKGHEVYILAEQFLTRFQDLYRPIKEKQQQPTGMNQNPN-SV 119
Query: 491 HTPTSRKAPPLPPPLDMRRILDRSESITHPMDSRLKPISTTPSSRTPAPKKPKAKDPHKR 550
TP+ + P ++KP+ KPKAKDP+KR
Sbjct: 120 RTPSPMRVP------------------------QVKPLKQP---------KPKAKDPNKR 146
Query: 551 DMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWELDR 610
+M +EK KL LQSLP EK++ +VQII+KRN L Q DEIE+DI++VD ETLWELDR
Sbjct: 147 EMNLEEKHKLGVGLQSLPQEKMEQVVQIIRKRNGHLRQEGDEIELDIEAVDTETLWELDR 206
Query: 611 FVTNYKKSLSKNKRKA 626
FVTNYKK +SK KR+A
Sbjct: 207 FVTNYKKMVSKIKRQA 222
>gi|357476127|ref|XP_003608349.1| Bromodomain-containing protein [Medicago truncatula]
gi|355509404|gb|AES90546.1| Bromodomain-containing protein [Medicago truncatula]
Length = 533
Score = 239 bits (611), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 157/389 (40%), Positives = 215/389 (55%), Gaps = 64/389 (16%)
Query: 346 NKKS---KLNGKKQ---AGNELAHGFGTGSKIFKSCSALLEKLMKHKHGWVFNA-----P 394
NKKS K +G K+ A EL K+C +L KLMK+K GW+FN P
Sbjct: 113 NKKSGSKKFSGNKRPFPAEKELKKSKSEIGDAMKACGQILTKLMKNKSGWIFNTWIFNTP 172
Query: 395 VDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDV 454
V+ L LHDYF II+HPMDLGTVK++L KN Y +P EFA+DV+LTF NA+TYNPKG DV
Sbjct: 173 VNATALNLHDYFDIIKHPMDLGTVKSKLAKNAYSTPAEFADDVKLTFKNALTYNPKGHDV 232
Query: 455 HIMAEQLLKIFEDKWVVIESEYNREMRIGADYEMGF----HTPTSRKAP---------PL 501
+ A QLL+ FE+ + I+ +++ + D E+ H R+ P+
Sbjct: 233 NTAAMQLLEKFEELYRPIQEKFDEK---SFDDELQASSWNHVEPEREREKVKKKDNPIPI 289
Query: 502 PPPLDMRRILDRSESITHPMDSRLKPISTTPS-----SRTPAP-----------KKPKAK 545
PPP + R ES+ P + +P ++ P R P+P KPKA+
Sbjct: 290 PPP-----VAKRQESLPEPASTSNQPSTSNPQLAQSPVRIPSPMRALPVKPLKQPKPKAR 344
Query: 546 DPHKRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETL 605
DP+KR+M +EK KL LQ LP EK++ +VQII+KRN L Q DEIE+D+++VD ETL
Sbjct: 345 DPNKREMNVEEKHKLGLGLQILPPEKMEQVVQIIRKRNGHLEQDGDEIELDMEAVDTETL 404
Query: 606 WELDRFVTNYKKSLSKNKRKAELANQARAVAQQNVQ-------QQTPAPVVTEVRKEIRT 658
WELDR VTN+KK +SK KR+A + N + N + TP P + +K+I T
Sbjct: 405 WELDRLVTNWKKMVSKIKRQALMDNNNVPSNKGNGELPDREKVDATP-PSEGKKQKKIDT 463
Query: 659 --------DDRIGSTSSPVQVEKQVDNGS 679
DD + PV++EK D G+
Sbjct: 464 VDEDVDIGDDMPANNFPPVEIEKDKDMGA 492
>gi|255554567|ref|XP_002518322.1| bromodomain-containing protein, putative [Ricinus communis]
gi|223542542|gb|EEF44082.1| bromodomain-containing protein, putative [Ricinus communis]
Length = 634
Score = 239 bits (609), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 163/421 (38%), Positives = 225/421 (53%), Gaps = 71/421 (16%)
Query: 321 TPKANQFYRNSEFLLAKDKFPPAESNKKSKLNGKKQAGNELAHGFGTGSKIFKSCSALLE 380
TP N +N + K FP A +N K ++L + ++ K C +L
Sbjct: 185 TPNFNGKKQNKKVTGNKRPFPSATTN--YGFVAKDVKRSDLYNSHPENVQLMKKCGQMLT 242
Query: 381 KLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLT 440
KLMKHK G++FN PVDV+ + LHDYF II+ PMDLGTVK +L N Y+SP +FA DVRLT
Sbjct: 243 KLMKHKFGYIFNEPVDVERMNLHDYFEIIKKPMDLGTVKKKLGSNEYESPIDFAADVRLT 302
Query: 441 FHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEY-------NREMRIGADYEMGF--- 490
F+NAM YNPKG +V+ AEQ L FE+ + I + +++ + D E+
Sbjct: 303 FNNAMKYNPKGHEVYTFAEQFLSRFEELFRPIREKLGDFVLDDDQDQIVHHDREIEHEQE 362
Query: 491 ---------------HTPTSRKAPPLPPPLDMRRILDRSESIT-------HPMDSRLKP- 527
H +R+ D+ R+ E++ HP+ + P
Sbjct: 363 HEHEQVHEVQASSWDHHSLNRRGGSG----DIERVKKDQENVLQITSKSDHPIGKSVPPS 418
Query: 528 ISTTPSS------RTPAPK-----------KPKAKDPHKRDMTYDEKQKLSTNLQSLPSE 570
+ + P S RTP+P KPKAKDP+KR+M+ +EK KL LQSLP E
Sbjct: 419 VLSNPQSTSQLPVRTPSPMRAPPVKPVKLPKPKAKDPNKREMSLEEKHKLGVGLQSLPQE 478
Query: 571 KLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWELDRFVTNYKKSLSKNKRKAEL-- 628
K++ +VQII+KRN L Q DEIE+DI++VD ETLWELDRFVTNYKK +SK KR+A +
Sbjct: 479 KMEQVVQIIRKRNGHLRQDGDEIELDIEAVDTETLWELDRFVTNYKKMVSKIKRQALMGI 538
Query: 629 ANQARAVAQQNVQQQTPAPV-VTEVRKEIRTDD-----RIG-----STSSPVQVEKQVDN 677
A AV++ N + +TE +K + D IG S+ PV++EK DN
Sbjct: 539 APTGNAVSEGNKDVSVNERIDITEAKKPKKGDAGDEDVDIGDEMPMSSFPPVEIEK--DN 596
Query: 678 G 678
G
Sbjct: 597 G 597
>gi|217074676|gb|ACJ85698.1| unknown [Medicago truncatula]
Length = 471
Score = 239 bits (609), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 142/325 (43%), Positives = 191/325 (58%), Gaps = 48/325 (14%)
Query: 346 NKKS---KLNGKKQ---AGNELAHGFGTGSKIFKSCSALLEKLMKHKHGWVFNA-----P 394
NKKS K +G K+ A EL K+C +L KLMK+K GW+FN P
Sbjct: 113 NKKSGSKKFSGNKRPFPAEKELKKSKSEIGDAMKACGQILTKLMKNKSGWIFNTWIFNTP 172
Query: 395 VDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDV 454
V+ L LHDYF II+HPMDLGTVK++L KN Y +P EFA+DV+LTF NA+TYNPKG DV
Sbjct: 173 VNATALNLHDYFDIIKHPMDLGTVKSKLAKNAYSTPAEFADDVKLTFKNALTYNPKGHDV 232
Query: 455 HIMAEQLLKIFEDKWVVIESEYNREMRIGADYEMGF----HTPTSRKAP---------PL 501
+ A QLL+ FE+ + I+ +++ + D E+ H R+ P+
Sbjct: 233 NTAAMQLLEKFEELYRPIQEKFDEK---SFDDELQASSWNHVEPEREREKVKKKDNPIPI 289
Query: 502 PPPLDMRRILDRSESITHPMDSRLKPISTTPS-----SRTPAP-----------KKPKAK 545
PPP + R ES+ P + +P ++ P R P+P KPKA+
Sbjct: 290 PPP-----VAKRQESLPEPASTSNQPSTSNPQLAQSPVRIPSPMRALPVKPLKQPKPKAR 344
Query: 546 DPHKRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETL 605
DP+KR+M +EK KL LQ LP EK++ +VQII+KRN L Q DEIE+D+++VD ETL
Sbjct: 345 DPNKREMNVEEKHKLGLGLQILPPEKMEQVVQIIRKRNGHLEQDGDEIELDMEAVDTETL 404
Query: 606 WELDRFVTNYKKSLSKNKRKAELAN 630
WELDR VTN+KK +SK KR+A + N
Sbjct: 405 WELDRLVTNWKKMVSKIKRQALMDN 429
>gi|57282322|emb|CAD43287.1| bromodomain-containing RNA-binding protein 2 [Nicotiana tabacum]
Length = 616
Score = 239 bits (609), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 136/307 (44%), Positives = 173/307 (56%), Gaps = 49/307 (15%)
Query: 371 IFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSP 430
+ K C+ +L KLMKHK GW+FN PVD + LGLHDY II+ P DLGT K+ L+ N+Y +P
Sbjct: 192 MMKECTQVLGKLMKHKSGWIFNTPVDAEALGLHDYHQIIKRPXDLGTXKSNLSNNFYPTP 251
Query: 431 KEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEMGF 490
EFA DVRLTF+NA+ YNPK VH AEQLL FED + I+ + N+ G F
Sbjct: 252 FEFAADVRLTFNNALLYNPKTDQVHGFAEQLLARFEDMFRPIQDKLNK--LDGGSGRRDF 309
Query: 491 H--------------TPTSRKAP-PLPPPL---DMRRILDRSESITHPMDSRLKPISTTP 532
H TP K P P P P R++ S + P +P P
Sbjct: 310 HAIDELQGSSWNHIPTPERVKKPKPTPAPHISKKQERMMQNHSSASTPSLPVQQPPDNPP 369
Query: 533 SSR------TPAP-----------------------KKPKAKDPHKRDMTYDEKQKLSTN 563
R TP+P KP+AKDP+KR+M+ +EK KL
Sbjct: 370 VVRQQSPLSTPSPVRAPPAAKPQSSVAAKVPPMGKQPKPRAKDPNKREMSMEEKHKLGVG 429
Query: 564 LQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWELDRFVTNYKKSLSKNK 623
LQSLP EK+ +VQII+KRN L Q DEIE+DI+++D ETLWELDRFVTN+KK +SK K
Sbjct: 430 LQSLPQEKMPQLVQIIRKRNEHLAQDGDEIELDIEALDTETLWELDRFVTNWKKMVSKTK 489
Query: 624 RKAELAN 630
R+A + N
Sbjct: 490 RQALINN 496
>gi|57282314|emb|CAD43283.1| bromodomain-containing RNA-binding protein 1 [Solanum tuberosum]
Length = 602
Score = 238 bits (608), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 142/313 (45%), Positives = 181/313 (57%), Gaps = 41/313 (13%)
Query: 358 GNELAHG----FGTGSKIFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPM 413
GN + G GT S + K C +L KLMKHK+GW+FN PVD + LGLHDY II+ P+
Sbjct: 176 GNPVGGGGVKAIGTES-MMKECRQILAKLMKHKNGWIFNIPVDAEALGLHDYHQIIKRPI 234
Query: 414 DLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIE 473
DLGTVK+ L KN+Y SP EFA DVRLTF+NA+ YNPK V+ AEQLL FED + ++
Sbjct: 235 DLGTVKSNLAKNFYPSPFEFAADVRLTFNNALLYNPKTDQVNGFAEQLLGRFEDMFRPLQ 294
Query: 474 SEYNREMRIGADYE--------MGFHTPTSR-----KAPPLPP-PLDMRRILDRSESITH 519
+ N+ DY H PT KA P+P R+ + S + T
Sbjct: 295 DKMNKLEGGRRDYHPVDELQGSSWNHIPTPERVKKPKATPVPHISKKQERMQNHSSASTP 354
Query: 520 PMDS--------RLKPISTTPSSRTPAPK--------------KPKAKDPHKRDMTYDEK 557
+ + P+ST R P K KP+AKDP+KR M +EK
Sbjct: 355 SLPVPPPNPPARQQSPLSTPSPVRAPPSKPESAAKVPAMGKQPKPRAKDPNKRVMNMEEK 414
Query: 558 QKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWELDRFVTNYKK 617
KL LQSLP EK+ +VQII+KRN L Q DEIE+DI+++D ETLWELDRFVTN+KK
Sbjct: 415 HKLGVGLQSLPQEKMPQLVQIIRKRNEHLAQDGDEIELDIEALDTETLWELDRFVTNWKK 474
Query: 618 SLSKNKRKAELAN 630
+SK KR+A + N
Sbjct: 475 MVSKTKRQALMIN 487
>gi|57282318|emb|CAD43285.1| bromodomain-containing RNA-binding protein 2 [Nicotiana
benthamiana]
Length = 613
Score = 238 bits (606), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 138/307 (44%), Positives = 176/307 (57%), Gaps = 49/307 (15%)
Query: 371 IFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSP 430
+ K C +L KLMKHK GW+FN PVD + LGLHDY II+ PMDLGTVK+ L+ N Y +P
Sbjct: 192 MMKECRQVLGKLMKHKSGWIFNTPVDAEALGLHDYRQIIKRPMDLGTVKSNLSNNLYPTP 251
Query: 431 KEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEMGF 490
EFA DVRLTF+NA+ YNPK VH+ AE LL FED + + + N+ G F
Sbjct: 252 FEFAADVRLTFNNALLYNPKTDQVHVFAELLLTRFEDMFRPFQDKLNK--LDGGSGRRDF 309
Query: 491 H--------------TPTSRKAP-PLPPPL---DMRRILDRSES-------ITHPMDS-- 523
H TP K P P P P R++ S + P D+
Sbjct: 310 HAIDELQGSSWNHIPTPERVKKPKPTPAPHISKKQERMMQNHSSASTPSLPVQQPPDNPP 369
Query: 524 ---RLKPIST-TPSSRTPAPK----------------KPKAKDPHKRDMTYDEKQKLSTN 563
+ P+ST +P PA K KP+AKDP+KR+M+ +EK KL
Sbjct: 370 VVQQQSPLSTPSPVRAPPAAKPQSSVAAKVPPMEKQPKPRAKDPNKREMSMEEKHKLGVG 429
Query: 564 LQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWELDRFVTNYKKSLSKNK 623
LQSLP EK+ +VQII+KRN L Q DEIE+DI+++D ETLWELDRFVTN+KK +SK K
Sbjct: 430 LQSLPQEKMPQLVQIIRKRNEHLAQDGDEIELDIEALDTETLWELDRFVTNWKKMVSKTK 489
Query: 624 RKAELAN 630
R+A + N
Sbjct: 490 RQALINN 496
>gi|168024468|ref|XP_001764758.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684052|gb|EDQ70457.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 317
Score = 236 bits (602), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 126/251 (50%), Positives = 156/251 (62%), Gaps = 14/251 (5%)
Query: 371 IFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSP 430
+ K C+ LL KLM HKHGWVFN PVD + LGLHDY +II+ PMDLGT+K +L+ Y SP
Sbjct: 77 MLKQCTTLLRKLMTHKHGWVFNEPVDAEKLGLHDYHSIIKKPMDLGTIKKKLHGKGYPSP 136
Query: 431 KEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEMGF 490
EFAED+RLTF NAMTYNP G DV++MAE L IFE+ W +R+M
Sbjct: 137 VEFAEDIRLTFANAMTYNPVGHDVYVMAELLKSIFEEWW----KNMSRKMEEEKRRAEKE 192
Query: 491 HTPTSRKAPPLPPPLDMRRILDRSESITHPMDSRLKPISTTPSSRTPAPKKPKAKDPHKR 550
+ ++RR S+T SSR + KP+ + KR
Sbjct: 193 EEMLLNDEDSVEETGEVRRGERDLSSLTR----------GKTSSRMASQPKPRPDEVGKR 242
Query: 551 DMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWELDR 610
MT++EK+KLS NL+ LP +KL+ IVQIIKKRN L Q++DEIEVDIDS D +TLWELDR
Sbjct: 243 AMTFEEKRKLSVNLERLPGDKLERIVQIIKKRNPDLGQNEDEIEVDIDSFDNDTLWELDR 302
Query: 611 FVTNYKKSLSK 621
FVTNY KS K
Sbjct: 303 FVTNYMKSRGK 313
>gi|302764766|ref|XP_002965804.1| hypothetical protein SELMODRAFT_406866 [Selaginella moellendorffii]
gi|300166618|gb|EFJ33224.1| hypothetical protein SELMODRAFT_406866 [Selaginella moellendorffii]
Length = 706
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 145/360 (40%), Positives = 192/360 (53%), Gaps = 48/360 (13%)
Query: 288 VGITRPSRPLNQLSISTVENSLGLSENVEKEKRTPKANQFYRNSEFLLAKDKFPPAESNK 347
+GI+ L Q S S+ + KEKRTPKANQ Y SE+ AKDK PP E K
Sbjct: 21 IGISTKIEALEQQSRSSGTLGTPGTGGSSKEKRTPKANQMYSTSEYFSAKDKMPPPEKVK 80
Query: 348 -----------KSKLNGKKQAGNELAHGFGTGSKIFKSCSALLEKLMKHKHGWVFNAPVD 396
K ++ K+Q ELA G I K C LL+KL+ HKH WVFN PVD
Sbjct: 81 PKALVPPKKGTKGDIDNKRQR-VELARMKRMGD-IMKQCGTLLKKLITHKHAWVFNEPVD 138
Query: 397 VKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHI 456
LGLHDY +IR PMDLGT+K +L Y++P EFA+DV+LTF NAMTYNP G DV I
Sbjct: 139 AVKLGLHDYHKVIRRPMDLGTIKKKLEGGHYRTPVEFADDVKLTFSNAMTYNPPGHDVFI 198
Query: 457 MAEQLLKIFEDKWVVIESEYNREM-------RIGADYEMGFHTPTSRKAPPLPPPLDMRR 509
MA+ L +IF+++W I+ + E + A+ G P ++
Sbjct: 199 MADILRQIFDERWRCIKEKLEEEQTKCRVEDEVFAEIAQGNPNPA------------LQN 246
Query: 510 ILDRSESITHPMDSRLKPISTTPSSRTPAPKKPKAKDPHKRDMTYDEKQKLSTNLQSL-- 567
+ SI + S KP AP+ +K KR MTY+EK +L NL+ +
Sbjct: 247 LKQSLLSIEDQLSSLKKPAG--------APR--GSKKSGKRQMTYEEKTELGKNLEKVLE 296
Query: 568 --PSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWELDRFVTNYKKSLSKNKRK 625
P +K D IV ++KK N +L Q +D IEVDID +D +TLWEL + V + K KNK++
Sbjct: 297 QNPGDKADEIVLLLKKHNPNLSQSEDTIEVDIDGIDNDTLWELHKMVASCMK--PKNKKR 354
>gi|302823131|ref|XP_002993220.1| hypothetical protein SELMODRAFT_431331 [Selaginella moellendorffii]
gi|300138990|gb|EFJ05740.1| hypothetical protein SELMODRAFT_431331 [Selaginella moellendorffii]
Length = 702
Score = 232 bits (592), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 145/360 (40%), Positives = 192/360 (53%), Gaps = 48/360 (13%)
Query: 288 VGITRPSRPLNQLSISTVENSLGLSENVEKEKRTPKANQFYRNSEFLLAKDKFPPAESNK 347
+GI+ L Q S S+ + KEKRTPKANQ Y SE+ AKDK PP E K
Sbjct: 21 IGISTKIEALEQQSRSSGTLGTPGTGGSSKEKRTPKANQMYSTSEYFSAKDKMPPPEKVK 80
Query: 348 -----------KSKLNGKKQAGNELAHGFGTGSKIFKSCSALLEKLMKHKHGWVFNAPVD 396
K ++ K+Q ELA G I K C LL+KL+ HKH WVFN PVD
Sbjct: 81 PKALVPPKKGTKGDIDNKRQR-VELARMKRMGD-IMKQCGTLLKKLITHKHAWVFNEPVD 138
Query: 397 VKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHI 456
LGLHDY +IR PMDLGT+K +L Y++P EFA+DV+LTF NAMTYNP G DV I
Sbjct: 139 AVKLGLHDYHKVIRRPMDLGTIKKKLEGGHYRTPVEFADDVKLTFSNAMTYNPPGHDVFI 198
Query: 457 MAEQLLKIFEDKWVVIESEYNREM-------RIGADYEMGFHTPTSRKAPPLPPPLDMRR 509
MA+ L +IF+++W I+ + E + A+ G P ++
Sbjct: 199 MADILRQIFDERWRCIKEKLEEEQTKCRVEDEVFAEIAQGNPNPA------------LQN 246
Query: 510 ILDRSESITHPMDSRLKPISTTPSSRTPAPKKPKAKDPHKRDMTYDEKQKLSTNLQSL-- 567
+ SI + S KP AP+ +K KR MTY+EK +L NL+ +
Sbjct: 247 LKQSLLSIEDQLSSLKKPAG--------APR--GSKKSGKRQMTYEEKTELGKNLEKVLE 296
Query: 568 --PSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWELDRFVTNYKKSLSKNKRK 625
P +K D IV ++KK N +L Q +D IEVDID +D +TLWEL + V + K KNK++
Sbjct: 297 QNPGDKADEIVLLLKKHNPNLSQSEDTIEVDIDGIDNDTLWELHKMVASCMK--PKNKKR 354
>gi|357476121|ref|XP_003608346.1| Bromodomain-containing protein [Medicago truncatula]
gi|355509401|gb|AES90543.1| Bromodomain-containing protein [Medicago truncatula]
Length = 518
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 136/337 (40%), Positives = 193/337 (57%), Gaps = 40/337 (11%)
Query: 372 FKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPK 431
K+C +L+KLMK K GW+F++PVD L LHDYF II+HPMDLGTVK++L KN Y +P
Sbjct: 149 MKACGQILQKLMKTKIGWIFSSPVDPVALNLHDYFDIIKHPMDLGTVKSKLAKNAYSTPA 208
Query: 432 EFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEMGF- 490
EFA+DV+LTF NA+TYNPKG DV+ A QLL+ FE+ + I+ +++ + D E+
Sbjct: 209 EFADDVKLTFKNALTYNPKGHDVNTAAMQLLEKFEELYRPIQEKFDEK---SFDDELQAS 265
Query: 491 ---HTPTSRK---------APPLPPPLDMRRIL--DRSESITHPMDSRLKPISTTPSSRT 536
H R+ P+PPP+ R+ L + + + P S P++ +P RT
Sbjct: 266 SWNHVEPERERERVKKKDNPIPIPPPVAKRQELLPEPASTSNQPSTSNPPPLAQSPV-RT 324
Query: 537 PAPKKPKAKDPHKRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVD 596
P+P + P K+ T + LP EK++ +VQII+KRN L Q DEIE+D
Sbjct: 325 PSPTRALPVKPLKQPNT-----SWDLGCRFLPPEKMEQVVQIIRKRNGHLEQDGDEIELD 379
Query: 597 IDSVDAETLWELDRFVTNYKKSLSKNKRKAELANQARAVAQQNVQ-------QQTPAPVV 649
+++VD ETLWELDR VTN+KK +SK KR+A + N + N + TP P
Sbjct: 380 MEAVDTETLWELDRLVTNWKKMVSKIKRQALMDNNNVPSNKGNGELPDREKVDATP-PSE 438
Query: 650 TEVRKEIRT--------DDRIGSTSSPVQVEKQVDNG 678
+ +K+I T DD + PV++EK D G
Sbjct: 439 GKKQKKIDTVDEDVDIGDDMPANDFPPVEIEKDKDMG 475
>gi|242077236|ref|XP_002448554.1| hypothetical protein SORBIDRAFT_06g028960 [Sorghum bicolor]
gi|241939737|gb|EES12882.1| hypothetical protein SORBIDRAFT_06g028960 [Sorghum bicolor]
Length = 458
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 126/323 (39%), Positives = 178/323 (55%), Gaps = 29/323 (8%)
Query: 373 KSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKE 432
K C +L +L K K FNAPV+V+ LGLHDY T+I+ PMDLGTVK L Y S +
Sbjct: 117 KRCGQILTRLRKDKRSVWFNAPVEVERLGLHDYHTVIKRPMDLGTVKEGLAAGRYASHDD 176
Query: 433 FAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEMGFHT 492
FA DVRLTF NA+ YNP G +VH A LL FE + + + E R
Sbjct: 177 FAADVRLTFTNALRYNPVGHEVHTFAGALLAYFERMYKEALANFEEECR----------- 225
Query: 493 PTSRKAPPLPPPLDMRRILDRSESITHPMDSRLKPISTTPSSRTPAPKKPKAKDPHKRDM 552
S + PP P + P+++++KP + R KPKA++P+KR+M
Sbjct: 226 --SLEPPPRPVA-----VELPPPPAAEPVEAKVKPRAGNVRMR-----KPKAREPNKREM 273
Query: 553 TYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWELDRFV 612
+ +EK L L+SLP EK+ N++QI++KRN++ DEIE+DID +D ET WELDRFV
Sbjct: 274 SLEEKNMLRIGLESLPEEKMHNVLQIVRKRNNNPEMLGDEIELDIDEMDVETQWELDRFV 333
Query: 613 TNYKKSLSKNKRKAELANQARAVAQQNVQQQTPAPVVTEVRKEIRTDDR-----IGSTSS 667
TN+ K+L K++R A + A V V + AP V +V + DD + ST+
Sbjct: 334 TNFNKALKKSQRAAMMNGGAADVTSAAVAEDDTAP-VGDVPALVDNDDAESEKPVKSTAM 392
Query: 668 PVQVEKQVDNGSRSSSSSSSSSD 690
QV++ VD G +++ S +
Sbjct: 393 AEQVDEYVDIGDEMPTATYQSME 415
>gi|226530258|ref|NP_001151218.1| bromodomain containing protein [Zea mays]
gi|195645110|gb|ACG42023.1| bromodomain containing protein [Zea mays]
Length = 447
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 125/327 (38%), Positives = 171/327 (52%), Gaps = 38/327 (11%)
Query: 373 KSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKE 432
K C +L +L K K FNAPV+V+ LGLHDY +I+ PMDLGTVK L Y S +
Sbjct: 107 KRCGQILSRLRKDKRSVWFNAPVEVERLGLHDYHAVIKRPMDLGTVKEGLAAGRYASHDD 166
Query: 433 FAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKW----VVIESEYNREMRIGADYEM 488
FA DVRLTF NA+ YNP G +VH A LL FE + V +E E R
Sbjct: 167 FAADVRLTFTNALRYNPVGHEVHTFAGALLAYFERMYKEALVCLEEERKR---------- 216
Query: 489 GFHTPTSRKAPPLPPPLDMRRILDRSESITHPMDSRLKPISTTPSSRTPAPKKPKAKDPH 548
L PP R + K + + R +KPKA++P+
Sbjct: 217 ------------LEPP---RPVAAELPPPPAVEPVEAKAKTRAGNVRM---RKPKAREPN 258
Query: 549 KRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWEL 608
KR+M+ +EK L L SLP EK+ N++QI++KRN++ DEIE+DID +D ET WEL
Sbjct: 259 KREMSLEEKNMLRLGLVSLPEEKMHNVLQIVRKRNNNPEMLGDEIELDIDEMDVETQWEL 318
Query: 609 DRFVTNYKKSLSKNKRKAELANQARAVAQQNVQQQTPAPVVTEVRKEIRTDDR-----IG 663
DRFVTN+ K+L K++R A L V V + AP V +V + DD +
Sbjct: 319 DRFVTNFNKALKKSQRAAMLNGGVADVTSTAVAEDDTAP-VGDVPTLVGNDDAESEEPVK 377
Query: 664 STSSPVQVEKQVDNGSRSSSSSSSSSD 690
ST+ QV++ VD G ++++ S +
Sbjct: 378 STTVAEQVDEYVDIGDEMPAATNQSME 404
>gi|226493082|ref|NP_001142377.1| hypothetical protein [Zea mays]
gi|194708534|gb|ACF88351.1| unknown [Zea mays]
gi|414585390|tpg|DAA35961.1| TPA: hypothetical protein ZEAMMB73_681303 [Zea mays]
Length = 451
Score = 196 bits (498), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 119/330 (36%), Positives = 173/330 (52%), Gaps = 30/330 (9%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN 425
G ++ K C +L +L K K FNAPV+V+ LGLHDY +I+ PMDLGTVK L
Sbjct: 104 GLRGEVRKRCGQILTRLRKDKRSVWFNAPVEVERLGLHDYHAVIKRPMDLGTVKEGLAAG 163
Query: 426 WYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGAD 485
Y S +FA DVRLTF NA+ YNP G +VH A LL FE + + + + +
Sbjct: 164 RYASHDDFAADVRLTFTNALRYNPVGHEVHTFAGALLAYFERMYKEALACFEEDCKRPEP 223
Query: 486 YEMGFHTPTSRKAPPLPPPLDMRRILDRSESITHPMDSRLKPISTTPSSRTPAPKKPKAK 545
T A P+++++KP + R KPKA+
Sbjct: 224 PRPVPPELTPPPA-------------------AEPVEAKVKPRAGNVRMR-----KPKAR 259
Query: 546 DPHKRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETL 605
+P+KR+M+ +EK L L+SLP EK+ N++QI++KRN++ DEIE+DID +D ET
Sbjct: 260 EPNKREMSLEEKNMLRVGLESLPEEKMHNVLQIVRKRNNNPEMLGDEIELDIDEMDVETQ 319
Query: 606 WELDRFVTNYKKSLSKNKRKAELANQARAVAQQNVQQQTPAPVVTEVRKEIRTDDR---- 661
WELDRFV N+ K+L K++R + A V V + AP V+ V + DD
Sbjct: 320 WELDRFVANFNKALKKSQRAVVMNGGAADVTSAAVAENDTAP-VSNVLTLVDNDDVEREK 378
Query: 662 -IGSTSSPVQVEKQVDNGSRSSSSSSSSSD 690
+ S + QV++ VD G +++ S +
Sbjct: 379 PVRSATMAEQVDEYVDIGDEMPTATYQSME 408
>gi|413919577|gb|AFW59509.1| bromodomain containing protein [Zea mays]
Length = 447
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 125/327 (38%), Positives = 170/327 (51%), Gaps = 38/327 (11%)
Query: 373 KSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKE 432
K C +L +L K K FNAPV+V+ LGLHDY +I+ PMDLGTVK L Y S +
Sbjct: 107 KRCGQILSRLRKDKRSVWFNAPVEVERLGLHDYHAVIKRPMDLGTVKEGLAAGRYASHDD 166
Query: 433 FAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKW----VVIESEYNREMRIGADYEM 488
FA DVRLTF NA+ YNP G +VH A LL FE + V +E E R
Sbjct: 167 FAADVRLTFTNALRYNPVGHEVHTFAGALLAYFERMYKEALVCLEEERKR---------- 216
Query: 489 GFHTPTSRKAPPLPPPLDMRRILDRSESITHPMDSRLKPISTTPSSRTPAPKKPKAKDPH 548
L PP R + K + + R +KPKA++P+
Sbjct: 217 ------------LEPP---RPVAAELPPPPAVEPVEAKAKTRAGNVRM---RKPKAREPN 258
Query: 549 KRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWEL 608
KR+M+ +EK L L SLP EK+ N++QI++KRN++ DEIE+DID +D ET WEL
Sbjct: 259 KREMSLEEKNMLRLGLVSLPEEKMHNVLQIVRKRNNNPEMLGDEIELDIDEMDVETQWEL 318
Query: 609 DRFVTNYKKSLSKNKRKAELANQARAVAQQNVQQQTPAPVVTEVRKEIRTDDR-----IG 663
DRFVTN+ K+L K++R A L V V + AP V +V + DD +
Sbjct: 319 DRFVTNFNKALKKSQRAAMLNGGVADVTSTAVAEDDTAP-VGDVPTLVGNDDAESEEPVK 377
Query: 664 STSSPVQVEKQVDNGSRSSSSSSSSSD 690
ST+ QV++ VD G +++ S +
Sbjct: 378 STTVAEQVDEYVDIGDEMPAATYQSME 404
>gi|357166043|ref|XP_003580578.1| PREDICTED: transcription factor GTE7-like [Brachypodium distachyon]
Length = 458
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 109/280 (38%), Positives = 147/280 (52%), Gaps = 26/280 (9%)
Query: 373 KSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKE 432
K C+ +L +L K K FNAPV+V+ LGLHDY +I+ PMDLGTV+ RL Y S
Sbjct: 126 KRCAQILARLQKDKRSIWFNAPVEVERLGLHDYHAVIKSPMDLGTVRARLAAKAYPSHDA 185
Query: 433 FAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEMGFHT 492
FA DVRLTF NA+ YNP G DVHI A LL FE + S + E +
Sbjct: 186 FAADVRLTFSNALRYNPAGHDVHIFAGDLLASFEKMYRAAVSWFEEECK----------- 234
Query: 493 PTSRKAPPLPPPLDMRRILDRSESITHPMDSRLKPISTTPSSRTPAPKKPKAKDPHKRDM 552
R + + + R +KPKA++P+KR+M
Sbjct: 235 ---------------RLAPPPPMPVAAELPPPPVVVPAQVKPRAARMRKPKAREPNKREM 279
Query: 553 TYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWELDRFV 612
+ DEK L L+SLP EK+ N++QI++KRN + DEIE+DID +D ET WELDRFV
Sbjct: 280 SLDEKNMLREGLESLPEEKMHNVLQIVRKRNVNPALLGDEIELDIDEMDIETQWELDRFV 339
Query: 613 TNYKKSLSKNKRKAELANQARAVAQQNVQQQTPAPVVTEV 652
N+ K+L+K++R A + V V + V+T V
Sbjct: 340 NNFNKALNKSRRAAMMNGDGAVVNNATVTEAVNGDVLTLV 379
>gi|125549798|gb|EAY95620.1| hypothetical protein OsI_17475 [Oryza sativa Indica Group]
Length = 456
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 103/254 (40%), Positives = 138/254 (54%), Gaps = 27/254 (10%)
Query: 373 KSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKE 432
K C +L KL K K FNAPV+V LGLHDY +I+ PMDLGTV+ L Y S +
Sbjct: 122 KRCEQILAKLRKDKRSIWFNAPVEVDRLGLHDYHAVIKCPMDLGTVRANLAAGRYPSHDD 181
Query: 433 FAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEMGFHT 492
FA DVRLTF NA+ YNP G +VH A LL FE + S + +E+++
Sbjct: 182 FAADVRLTFSNALRYNPAGHEVHTFAGDLLASFEKMYKASMSWFEQELKLLEPPMPVPPP 241
Query: 493 PTSRKAPPLPPPLDMRRILDRSESITHPMDSRLKPISTTPSSRTPAPKKPKAKDPHKRDM 552
P+ P + +KPKA++P+KRDM
Sbjct: 242 ELPPAT---------------------------APVQVKPRAANVKMRKPKAREPNKRDM 274
Query: 553 TYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWELDRFV 612
T +EK L L+SLP EK+ N++QI++KRN + EIE+DID +D ET WELDRFV
Sbjct: 275 TLEEKNLLRVGLESLPEEKMHNVLQIVRKRNGNPELVGGEIELDIDEMDVETQWELDRFV 334
Query: 613 TNYKKSLSKNKRKA 626
N+KK+L+K++R A
Sbjct: 335 NNFKKALNKSRRAA 348
>gi|115460642|ref|NP_001053921.1| Os04g0623100 [Oryza sativa Japonica Group]
gi|38344165|emb|CAE03496.2| OSJNBa0053K19.4 [Oryza sativa Japonica Group]
gi|38345713|emb|CAD41835.2| OSJNBb0085C12.15 [Oryza sativa Japonica Group]
gi|113565492|dbj|BAF15835.1| Os04g0623100 [Oryza sativa Japonica Group]
gi|215695153|dbj|BAG90344.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 456
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 103/254 (40%), Positives = 138/254 (54%), Gaps = 27/254 (10%)
Query: 373 KSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKE 432
K C +L KL K K FNAPV+V LGLHDY +I+ PMDLGTV+ L Y S +
Sbjct: 122 KRCEQILAKLRKDKRSIWFNAPVEVDRLGLHDYHAVIKCPMDLGTVRANLAAGRYPSHDD 181
Query: 433 FAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEMGFHT 492
FA DVRLTF NA+ YNP G +VH A LL FE + S + +E+++
Sbjct: 182 FAADVRLTFSNALRYNPAGHEVHTFAGDLLASFEKMYKASMSWFEQELKLLEPPMPVPPP 241
Query: 493 PTSRKAPPLPPPLDMRRILDRSESITHPMDSRLKPISTTPSSRTPAPKKPKAKDPHKRDM 552
P+ P + +KPKA++P+KRDM
Sbjct: 242 ELPPAT---------------------------APVQVKPRAANVKMRKPKAREPNKRDM 274
Query: 553 TYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWELDRFV 612
T +EK L L+SLP EK+ N++QI++KRN + EIE+DID +D ET WELDRFV
Sbjct: 275 TLEEKNLLRVGLESLPEEKMHNVLQIVRKRNGNPELVGGEIELDIDEMDVETQWELDRFV 334
Query: 613 TNYKKSLSKNKRKA 626
N+KK+L+K++R A
Sbjct: 335 NNFKKALNKSRRAA 348
>gi|389608049|dbj|BAM17630.1| putative RING3 protein [Oryza sativa Indica Group]
Length = 456
Score = 191 bits (486), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 104/254 (40%), Positives = 141/254 (55%), Gaps = 27/254 (10%)
Query: 373 KSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKE 432
K C +L KL K K FNAPV+V LGLHDY +I+ PMDLGTV+ L Y S +
Sbjct: 122 KRCEQILAKLRKDKRSIWFNAPVEVDRLGLHDYHAVIKCPMDLGTVRANLAAGRYSSHDD 181
Query: 433 FAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEMGFHT 492
FA DVRLTF NA+ YNP G +VH A LL FE + S + +E+++
Sbjct: 182 FAADVRLTFSNALRYNPAGHEVHTFAGDLLASFEKMYKAFMSWFEQELKLLEPPMPVPPP 241
Query: 493 PTSRKAPPLPPPLDMRRILDRSESITHPMDSRLKPISTTPSSRTPAPKKPKAKDPHKRDM 552
P +++KP + R KPKA++P+KR+M
Sbjct: 242 ELPPATAP----------------------AQVKPRAGNVKMR-----KPKAREPNKREM 274
Query: 553 TYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWELDRFV 612
T +EK L L+SLP EK+ N++QI++KRN + EIE+DID +D ET WELDRFV
Sbjct: 275 TLEEKNLLRVGLESLPEEKMHNVLQIVRKRNGNPELVGGEIELDIDEMDVETQWELDRFV 334
Query: 613 TNYKKSLSKNKRKA 626
N+KK+L+K++R A
Sbjct: 335 NNFKKALNKSRRAA 348
>gi|116309747|emb|CAH66790.1| H0215F08.1 [Oryza sativa Indica Group]
gi|116309918|emb|CAH66952.1| B0809H07.7 [Oryza sativa Indica Group]
Length = 456
Score = 191 bits (486), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 104/254 (40%), Positives = 141/254 (55%), Gaps = 27/254 (10%)
Query: 373 KSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKE 432
K C +L KL K K FNAPV+V LGLHDY +I+ PMDLGTV+ L Y S +
Sbjct: 122 KRCEQILAKLRKDKRSIWFNAPVEVDRLGLHDYHAVIKCPMDLGTVRANLAAGRYSSHDD 181
Query: 433 FAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEMGFHT 492
FA DVRLTF NA+ YNP G +VH A LL FE + S + +E+++
Sbjct: 182 FAADVRLTFSNALRYNPAGHEVHTFAGDLLASFEKMYKAFMSWFEQELKLLEPPMPVPPP 241
Query: 493 PTSRKAPPLPPPLDMRRILDRSESITHPMDSRLKPISTTPSSRTPAPKKPKAKDPHKRDM 552
P +++KP + R KPKA++P+KR+M
Sbjct: 242 ELPPATAP----------------------AQVKPRAGNVKMR-----KPKAREPNKREM 274
Query: 553 TYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWELDRFV 612
T +EK L L+SLP EK+ N++QI++KRN + EIE+DID +D ET WELDRFV
Sbjct: 275 TLEEKNLLRVGLESLPEEKMHNVLQIVRKRNGNPELVGGEIELDIDEMDVETQWELDRFV 334
Query: 613 TNYKKSLSKNKRKA 626
N+KK+L+K++R A
Sbjct: 335 NNFKKALNKSRRAA 348
>gi|224121914|ref|XP_002318704.1| global transcription factor group [Populus trichocarpa]
gi|222859377|gb|EEE96924.1| global transcription factor group [Populus trichocarpa]
Length = 613
Score = 191 bits (486), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 127/356 (35%), Positives = 188/356 (52%), Gaps = 33/356 (9%)
Query: 280 SVGVPVTRVGITRPSRPLNQLSISTVENSLGLSENVEKEKRTPKANQFYRNSEFLLAKDK 339
+ GVP + +++ SRP + ++N L E V R + +R+ E K K
Sbjct: 2 TFGVPSQILSLSKMSRPERKDLEIRLKNDL---EQVRILHRKVASLSVHRSFEVSAPKSK 58
Query: 340 --FPPAESNKKSK--LNGKKQAGNELAHGFGTGSKIFKSCSALLEKLMKHKHGWVFNAPV 395
PP + +SK +G+ + A T + + K C LL +LM H+ GW+FN PV
Sbjct: 59 KRAPPGRNGARSKKGTSGRFEPVKSAAPLGITNAMLMKQCETLLNRLMTHQFGWIFNTPV 118
Query: 396 DVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVH 455
DV + + DYFTII+HPMDLGTVK+R+ Y SP FA DVRLTF NAM YNP G D H
Sbjct: 119 DVVKMNIPDYFTIIKHPMDLGTVKSRIISGEYSSPLGFAADVRLTFANAMKYNPPGNDFH 178
Query: 456 IMAEQLLKIFEDKWVVIESEYNREMRIGADYEMGFHTPTSRKAPPLPPPLDMRRILDRSE 515
MAE L K FE +W VIE +++ + AD E P+P D+R ++ +
Sbjct: 179 FMAETLSKFFEVRWKVIE----KKIPVTADVE------------PVPSRADVRMEMETTA 222
Query: 516 SITHPMDSRLKPI---STTPSSRTPAPKKPKAKDPHKRDMTYDEKQKLSTNLQSLPSEKL 572
I + P+ TPS P P ++ MT +E+QKLS L++L +E
Sbjct: 223 HIEKETTTDTPPLKKKKITPSDNKVKP------GPIRKVMTNEERQKLSMELEALLAELP 276
Query: 573 DNIVQIIKKRNSSLFQ-HDDEIEVDIDSVDAETLWELDRFVTNYKKSLSKNKRKAE 627
+NI++ +K+ + + Q +DEIE+DID++ + L+ L + + NY KN+ K E
Sbjct: 277 ENIIEFLKEHSGNAGQTGEDEIEIDIDALGDDILFNLRKLLDNYLLEKQKNQSKVE 332
>gi|389608036|dbj|BAM17618.1| putative RING3 protein [Oryza sativa Japonica Group]
Length = 456
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 104/254 (40%), Positives = 141/254 (55%), Gaps = 27/254 (10%)
Query: 373 KSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKE 432
K C +L KL K K FNAPV+V LGLHDY +I+ PMDLGTV+ L Y S +
Sbjct: 122 KRCEQILAKLRKDKRSIWFNAPVEVDRLGLHDYHAVIKCPMDLGTVRANLAAGRYSSHDD 181
Query: 433 FAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEMGFHT 492
FA DVRLTF NA+ YNP G +VH A LL FE + S + +E+++
Sbjct: 182 FAADVRLTFSNALRYNPAGHEVHTFAGDLLASFEKMYKACMSWFEQELKLLEPPMPVPPP 241
Query: 493 PTSRKAPPLPPPLDMRRILDRSESITHPMDSRLKPISTTPSSRTPAPKKPKAKDPHKRDM 552
P +++KP + R KPKA++P+KR+M
Sbjct: 242 ELPPATAP----------------------AQVKPRAGNVKMR-----KPKAREPNKREM 274
Query: 553 TYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWELDRFV 612
T +EK L L+SLP EK+ N++QI++KRN + EIE+DID +D ET WELDRFV
Sbjct: 275 TLEEKNLLRVGLESLPEEKMHNVLQIVRKRNGNPELVGGEIELDIDEMDVETQWELDRFV 334
Query: 613 TNYKKSLSKNKRKA 626
N+KK+L+K++R A
Sbjct: 335 NNFKKALNKSRRAA 348
>gi|125591685|gb|EAZ32035.1| hypothetical protein OsJ_16213 [Oryza sativa Japonica Group]
Length = 337
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 103/254 (40%), Positives = 138/254 (54%), Gaps = 27/254 (10%)
Query: 373 KSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKE 432
K C +L KL K K FNAPV+V LGLHDY +I+ PMDLGTV+ L Y S +
Sbjct: 3 KRCEQILAKLRKDKRSIWFNAPVEVDRLGLHDYHAVIKCPMDLGTVRANLAAGRYPSHDD 62
Query: 433 FAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEMGFHT 492
FA DVRLTF NA+ YNP G +VH A LL FE + S + +E+++
Sbjct: 63 FAADVRLTFSNALRYNPAGHEVHTFAGDLLASFEKMYKASMSWFEQELKLLEPPMPVPPP 122
Query: 493 PTSRKAPPLPPPLDMRRILDRSESITHPMDSRLKPISTTPSSRTPAPKKPKAKDPHKRDM 552
P + P + +KPKA++P+KRDM
Sbjct: 123 ELPPATAP---------------------------VQVKPRAANVKMRKPKAREPNKRDM 155
Query: 553 TYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWELDRFV 612
T +EK L L+SLP EK+ N++QI++KRN + EIE+DID +D ET WELDRFV
Sbjct: 156 TLEEKNLLRVGLESLPEEKMHNVLQIVRKRNGNPELVGGEIELDIDEMDVETQWELDRFV 215
Query: 613 TNYKKSLSKNKRKA 626
N+KK+L+K++R A
Sbjct: 216 NNFKKALNKSRRAA 229
>gi|356508786|ref|XP_003523135.1| PREDICTED: transcription factor GTE10-like [Glycine max]
Length = 781
Score = 188 bits (477), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 119/315 (37%), Positives = 174/315 (55%), Gaps = 39/315 (12%)
Query: 371 IFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSP 430
+ K C +L +LM H+ GWVFN PVDV L + DYFT+I+HPMDLGTVK R+ Y +P
Sbjct: 207 LMKLCENVLNRLMSHQFGWVFNTPVDVVKLNIPDYFTVIKHPMDLGTVKKRITSGEYSNP 266
Query: 431 KEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEMGF 490
+FA DVRLTF NAM YNP G DVHIMAE L K FE +W IE + + ++
Sbjct: 267 MDFAADVRLTFENAMFYNPAGNDVHIMAETLSKFFETRWKAIEKKIPAIDSVASEPSRPT 326
Query: 491 HTPT--SRKAPPLPPPLDMRRILDRSESITHPMDSRLKPISTTPSSRTPAPKKPKAKDPH 548
H T S + PP + + IT P D+ +KP +P
Sbjct: 327 HVETEISDRVPPT-----------KKKKIT-PNDTNVKP------------------EPV 356
Query: 549 KRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQ-HDDEIEVDIDSVDAETLWE 607
KR MT +EKQKLS L+++ E D+I +++++ + Q +DDEIE+DID++ +TL++
Sbjct: 357 KRIMTVEEKQKLSLELETMIGELPDSISDFLREQSYNEGQINDDEIEIDIDALSDDTLFK 416
Query: 608 LDRFVTNY----KKSLSK-NKRKAELANQARAVAQQNVQQQTPAPVVTEVRKEIRTDDRI 662
L + + +Y +KSL+K + + EL N++ + ++Q V E I +D
Sbjct: 417 LRKLLDDYMLEKQKSLAKAGQCEMELLNES-GFSNSSMQPHKGEEQVEEDVDIIGGNDPP 475
Query: 663 GSTSSPVQVEKQVDN 677
S P+++EK V N
Sbjct: 476 ISNYPPLEIEKDVTN 490
>gi|224136059|ref|XP_002322229.1| global transcription factor group [Populus trichocarpa]
gi|222869225|gb|EEF06356.1| global transcription factor group [Populus trichocarpa]
Length = 709
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 107/265 (40%), Positives = 147/265 (55%), Gaps = 34/265 (12%)
Query: 371 IFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSP 430
+ K C ALL +LM H+ GW+F PVDV L + DYFTII+HPMDLGTVK+++ Y SP
Sbjct: 165 LMKQCEALLNRLMAHQFGWIFKTPVDVVKLNIPDYFTIIKHPMDLGTVKSKIVSGEYSSP 224
Query: 431 KEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEY-------NREMRIG 483
FA DVRLTF NAM YNP G DVH MAE L K FE +W VIE + + RI
Sbjct: 225 LGFAADVRLTFSNAMKYNPPGNDVHSMAETLRKYFEVRWKVIEKKLPVTTGVESMPSRID 284
Query: 484 ADYEMGFHTPTSRKAPPLPPPLDMRRILDRSESITHPMDSRLKPISTTPSSRTPAPKKPK 543
E R+ PPL ++I P D+++KP
Sbjct: 285 VHIERETTVHIERETTTSAPPLKKKKIT--------PSDNKVKP---------------- 320
Query: 544 AKDPHKRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQ-HDDEIEVDIDSVDA 602
+P +R M+ EKQKLS L++L E ++I++ +K+ + + Q +DEIE+DID++
Sbjct: 321 --EPVRRVMSNAEKQKLSMELEALLGELPESIIEFLKEHSGNAGQTGEDEIEIDIDALGD 378
Query: 603 ETLWELDRFVTNYKKSLSKNKRKAE 627
+TL+ L + + NY KN+ KAE
Sbjct: 379 DTLFNLRKLLDNYILEKQKNQSKAE 403
>gi|356516581|ref|XP_003526972.1| PREDICTED: transcription factor GTE10-like [Glycine max]
Length = 786
Score = 186 bits (471), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 146/463 (31%), Positives = 219/463 (47%), Gaps = 105/463 (22%)
Query: 189 AATTREAPSENGVVAVKSGDGRV---KISLGSSTKREMREIRKKLEIELDTVRSLVKRIE 245
A R+ P N +G V SL + + E ++++ +L EL+ VR K+I+
Sbjct: 72 CAPKRKRPGLNTCGGDYAGSFNVPFRHFSLSAMSGFERKDLKVRLTWELEQVREFQKKID 131
Query: 246 AKEVQISGGVSNSGVLPVSDVVDNGIKRGHSEVASVGVPVTRVGITRPSRPLNQLSISTV 305
+ GG+S SD+ RG S G RP + +
Sbjct: 132 GMNSSVVGGLSL-----FSDI------RGCS-----------AGQKRPK-------LESQ 162
Query: 306 ENSLGLSENVEKEKRTPKANQFYRNSEFLLAKDKFPPAESNKKSKLNGKKQAGNELAHGF 365
+++ +S K++ P N P ++ + +L K A ++
Sbjct: 163 HSTMEVSVPPGKKRPVPGHNG--------------PKSKKSMSERLEHAKPAAPVTSYAM 208
Query: 366 GTGSKIFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN 425
+ KSC +L +LM H+ WVFN PVDV L + DYFT+I+HPMDLGTVK R+
Sbjct: 209 -----LMKSCENVLNRLMSHQFAWVFNDPVDVVKLNIPDYFTVIKHPMDLGTVKKRITSG 263
Query: 426 WYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIE----------SE 475
Y +P +FA DVRLTF NAM YNP G DVHIMAE L K FE +W IE SE
Sbjct: 264 EYSNPMDFAADVRLTFDNAMFYNPAGNDVHIMAETLSKFFETRWKAIEKKIPVIDCVASE 323
Query: 476 YNREMRIGADYEMGFHTPTSRKAPPLPPPLDMRRILDRSESITHPMDSRLKPISTTPSSR 535
+R R+ T S + PP + + IT P DS +KP
Sbjct: 324 PSRPTRV--------ETEISDRVPPT-----------KKKKIT-PNDSSVKP-------- 355
Query: 536 TPAPKKPKAKDPHKRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQ-HDDEIE 594
+P KR +T +EKQKLS L+++ E D+IV +++++ + Q +DDEIE
Sbjct: 356 ----------EPVKRIVTVEEKQKLSLELETMIGELPDSIVDFLREQSYNEGQTNDDEIE 405
Query: 595 VDIDSVDAETLWELDRFVTNYKKSLSKNKRKA-----ELANQA 632
+DID++ +TL++L + + +Y K++ KA EL N++
Sbjct: 406 IDIDTLSDDTLFKLRKLLDDYMLEKQKSQAKAGQCEMELLNES 448
>gi|359491054|ref|XP_002279401.2| PREDICTED: LOW QUALITY PROTEIN: transcription factor GTE10-like
[Vitis vinifera]
Length = 770
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 140/429 (32%), Positives = 210/429 (48%), Gaps = 101/429 (23%)
Query: 213 ISLGSSTKREMREIRKKLEIELDTVRSLVKRIEAKEVQISGGVSNSGVL-PVSDV--VDN 269
+SL ++ E R++ ++L++EL VR+ K+I + SN L P SD+ N
Sbjct: 100 LSLSKMSRAERRDLERRLKMELQQVRAFQKKI-------ASLCSNLVPLSPTSDIRSCSN 152
Query: 270 GIKRGHSEVASVGVPVTRVGITRPSRPLNQLSISTVENSLGLSENVEKEKRTPKANQFYR 329
G KR P +++ S+ ++ +++KR P
Sbjct: 153 GQKRP---------------------PKDKIQKSSEAST------HQRKKRPP------- 178
Query: 330 NSEFLLAKDKFPPAESNKKSK--LNGKKQAGNELAHGFGTGSKIFKSCSALLEKLMKHKH 387
PP + K K L+G+ ++ + A + S + K C LL +LM H+
Sbjct: 179 -----------PPGRNVPKMKRGLSGRFESVKQAAPPGTSNSMLMKQCETLLSRLMTHQF 227
Query: 388 GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTY 447
GW+FN PVDV L + DYFT+I+HPMDLGT+K+++ Y SP +FA DVRLTF NAMTY
Sbjct: 228 GWIFNNPVDVVELKIPDYFTVIKHPMDLGTIKSKMASGEYLSPFDFAADVRLTFSNAMTY 287
Query: 448 NPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEMGFHTPTSRKAPPLPPPLDM 507
NP+G DVH MAE L K FE +W IE + LP +D+
Sbjct: 288 NPRGNDVHFMAETLNKFFEMRWKPIEKK-------------------------LPVTIDV 322
Query: 508 RRILDRSESITHPMDSRLKPISTTPSSRTPAPKKPKAK--------DPHKRDMTYDEKQK 559
+ RS D+ L+ I T + R P KK K +P+KR MT +E+
Sbjct: 323 ESLPSRS-------DAHLE-IET--ADRMPPSKKKKVAPTDHKIKMEPNKRIMTKEERHN 372
Query: 560 LSTNLQSLPSEKLDNIVQIIKKRNSSLFQ-HDDEIEVDIDSVDAETLWELDRFVTNYKKS 618
L T L++L E D+IV +K+++ + Q +DEIE+DID++ +TL+ L + + Y
Sbjct: 373 LGTELETLLGELPDDIVDFLKEQSFNENQASEDEIEIDIDALSDDTLFTLRKLLDGYLLE 432
Query: 619 LSKNKRKAE 627
KN K E
Sbjct: 433 KQKNLTKTE 441
>gi|255540327|ref|XP_002511228.1| bromodomain-containing protein, putative [Ricinus communis]
gi|223550343|gb|EEF51830.1| bromodomain-containing protein, putative [Ricinus communis]
Length = 759
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 135/421 (32%), Positives = 209/421 (49%), Gaps = 86/421 (20%)
Query: 213 ISLGSSTKREMREIRKKLEIELDTVRSLVKRIEAKEVQISGGVSNSGVLPVSDVVDNGIK 272
+SL ++ E + ++ + + EL+ VR L K++ S G + + + P SD+
Sbjct: 97 LSLSKMSRFERKNLKLRFKRELEQVRFLYKKV------ASLGSNAAALSPSSDI------ 144
Query: 273 RGHSEVASVGVPVTRVGITRPSRPLNQLSISTVENSLGLSENVEKEKRTPKANQFYRNSE 332
R S+ G+ RP + T+ S +S P++
Sbjct: 145 RSCSD-----------GLKRPP-------LETLHKSYAVS--------APQS-------- 170
Query: 333 FLLAKDKFPPAESNKKSKLNGKKQAGNE--LAHGFGTGSKIFKSCSALLEKLMKHKHGWV 390
K + PP + ++K + K++ E A + + + K C LL +LM H++ WV
Sbjct: 171 ----KKRGPPGRNGARTKKSSHKRSEPEKLAAPVITSNAMLMKQCETLLSRLMLHQYAWV 226
Query: 391 FNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPK 450
FN PVDV+ L + DYFT+I+HPMDLGTVK+++ Y SP FA DVRLTF NAM YNP
Sbjct: 227 FNNPVDVEKLNIPDYFTVIKHPMDLGTVKSKITTGAYSSPLAFAADVRLTFSNAMKYNPP 286
Query: 451 GQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGAD---YEMGFHTPTSRKAPPLPPPLDM 507
G DVH MAE L K FE +W IE + + IGA+ G H T K P P
Sbjct: 287 GNDVHFMAETLSKYFEVRWKAIEKKL--PVTIGAEPVAPRAGIHVETETKIDPTPA---- 340
Query: 508 RRILDRSESITHPMDSRLKPISTTPSSRTPAPKKPKAKDPHKRDMTYDEKQKLSTNLQSL 567
+ + I +DS +K +P ++ M+ +EK KLST L++L
Sbjct: 341 -----KKKKIAQ-IDSMVK------------------LEPFRQVMSNEEKLKLSTELEAL 376
Query: 568 PSEKLDNIVQIIKKRNSSLFQHDD-EIEVDIDSVDAETLWELDRFVTNYKKSLSKNKRKA 626
SE + I+ +K+ + + Q+ + EIE+DID++ +TL+EL + + +Y KN+ KA
Sbjct: 377 LSELPETIIDFLKEHSHNDDQNGEVEIEIDIDTLSDDTLFELRKLLDDYLLEKRKNQAKA 436
Query: 627 E 627
E
Sbjct: 437 E 437
>gi|116309916|emb|CAH66950.1| B0809H07.5 [Oryza sativa Indica Group]
Length = 337
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 101/254 (39%), Positives = 139/254 (54%), Gaps = 27/254 (10%)
Query: 373 KSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKE 432
K C +L KL K K FNAPV+V LGL DY +I+ PMDLGTV+ L Y S +
Sbjct: 3 KRCDQILVKLRKDKRSIWFNAPVEVDRLGLQDYHAVIKCPMDLGTVRANLAAGRYPSHDD 62
Query: 433 FAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEMGFHT 492
FA D+RLTF NA+ YNP G +VH A LL FE + S + +E++I
Sbjct: 63 FAADIRLTFSNALRYNPAGHEVHTFAGDLLASFEKMYKASVSWFEQELKILEPPMPVPPP 122
Query: 493 PTSRKAPPLPPPLDMRRILDRSESITHPMDSRLKPISTTPSSRTPAPKKPKAKDPHKRDM 552
P +++KP + R KPKA++P+KR+M
Sbjct: 123 ELPPAKAP----------------------AQVKPRAGNVKMR-----KPKAREPNKREM 155
Query: 553 TYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWELDRFV 612
T +EK L L+SLP EK+ N++QI++KRN + EIE+DID +D ET W+LDRFV
Sbjct: 156 TLEEKNLLRVGLESLPEEKMHNVLQIVRKRNGNPELVGGEIELDIDEMDVETQWKLDRFV 215
Query: 613 TNYKKSLSKNKRKA 626
+KK+L+K++R A
Sbjct: 216 NKFKKALNKSRRAA 229
>gi|125591682|gb|EAZ32032.1| hypothetical protein OsJ_16210 [Oryza sativa Japonica Group]
Length = 515
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 101/254 (39%), Positives = 138/254 (54%), Gaps = 27/254 (10%)
Query: 373 KSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKE 432
K C +L KL K K FNAPV+V LGL DY +I+ PMDLGTV+ L Y S +
Sbjct: 3 KRCDQILAKLRKDKRSIWFNAPVEVDRLGLQDYHAVIKCPMDLGTVRANLAAGRYPSHDD 62
Query: 433 FAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEMGFHT 492
FA D+RLTF NA+ YNP G +VH A LL FE + S + +E++I
Sbjct: 63 FAADIRLTFSNALRYNPAGHEVHTFAGDLLASFEKMYKASVSWFEQELKILEPPMPVPPP 122
Query: 493 PTSRKAPPLPPPLDMRRILDRSESITHPMDSRLKPISTTPSSRTPAPKKPKAKDPHKRDM 552
P +++KP + R K KA++P+KR+M
Sbjct: 123 ELPPAKAP----------------------AQVKPRAGNVKMR-----KTKAREPNKREM 155
Query: 553 TYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWELDRFV 612
T +EK L L+SLP EK+ N++QI++KRN + EIE+DID +D ET WELDRFV
Sbjct: 156 TLEEKNLLRVGLESLPEEKMHNVLQIVRKRNGNPELVGGEIELDIDEMDVETQWELDRFV 215
Query: 613 TNYKKSLSKNKRKA 626
+KK+L+K++R A
Sbjct: 216 NKFKKALNKSRRAA 229
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/100 (47%), Positives = 68/100 (68%)
Query: 527 PISTTPSSRTPAPKKPKAKDPHKRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSL 586
P P + +K KA++P+KR+MT +EK L L+SLP EK+ N++QI++KRN +
Sbjct: 290 PAQVKPRAGNVKMRKTKAREPNKREMTLEEKNLLRVGLESLPEEKMHNVLQIVRKRNGNP 349
Query: 587 FQHDDEIEVDIDSVDAETLWELDRFVTNYKKSLSKNKRKA 626
EIE+DID +D ET WELDRFV +KK+L+K++R A
Sbjct: 350 ELVGGEIELDIDEMDVETQWELDRFVNKFKKALNKSRRAA 389
>gi|38344163|emb|CAE03494.2| OSJNBa0053K19.2 [Oryza sativa Japonica Group]
gi|38345711|emb|CAD41833.2| OSJNBb0085C12.13 [Oryza sativa Japonica Group]
Length = 299
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 101/254 (39%), Positives = 138/254 (54%), Gaps = 27/254 (10%)
Query: 373 KSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKE 432
K C +L KL K K FNAPV+V LGL DY +I+ PMDLGTV+ L Y S +
Sbjct: 3 KRCDQILAKLRKDKRSIWFNAPVEVDRLGLQDYHAVIKCPMDLGTVRANLAAGRYPSHDD 62
Query: 433 FAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEMGFHT 492
FA D+RLTF NA+ YNP G +VH A LL FE + S + +E++I
Sbjct: 63 FAADIRLTFSNALRYNPAGHEVHTFAGDLLASFEKMYKASVSWFEQELKILEPPMPVPPP 122
Query: 493 PTSRKAPPLPPPLDMRRILDRSESITHPMDSRLKPISTTPSSRTPAPKKPKAKDPHKRDM 552
P +++KP + R K KA++P+KR+M
Sbjct: 123 ELPPAKAP----------------------AQVKPRAGNVKMR-----KTKAREPNKREM 155
Query: 553 TYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWELDRFV 612
T +EK L L+SLP EK+ N++QI++KRN + EIE+DID +D ET WELDRFV
Sbjct: 156 TLEEKNLLRVGLESLPEEKMHNVLQIVRKRNGNPELVGGEIELDIDEMDVETQWELDRFV 215
Query: 613 TNYKKSLSKNKRKA 626
+KK+L+K++R A
Sbjct: 216 NKFKKALNKSRRAA 229
>gi|297723469|ref|NP_001174098.1| Os04g0622700 [Oryza sativa Japonica Group]
gi|255675790|dbj|BAH92826.1| Os04g0622700 [Oryza sativa Japonica Group]
Length = 355
Score = 179 bits (455), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 101/254 (39%), Positives = 138/254 (54%), Gaps = 27/254 (10%)
Query: 373 KSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKE 432
K C +L KL K K FNAPV+V LGL DY +I+ PMDLGTV+ L Y S +
Sbjct: 3 KRCDQILAKLRKDKRSIWFNAPVEVDRLGLQDYHAVIKCPMDLGTVRANLAAGRYPSHDD 62
Query: 433 FAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEMGFHT 492
FA D+RLTF NA+ YNP G +VH A LL FE + S + +E++I
Sbjct: 63 FAADIRLTFSNALRYNPAGHEVHTFAGDLLASFEKMYKASVSWFEQELKILEPPMPVPPP 122
Query: 493 PTSRKAPPLPPPLDMRRILDRSESITHPMDSRLKPISTTPSSRTPAPKKPKAKDPHKRDM 552
P +++KP + R K KA++P+KR+M
Sbjct: 123 ELPPAKAP----------------------AQVKPRAGNVKMR-----KTKAREPNKREM 155
Query: 553 TYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWELDRFV 612
T +EK L L+SLP EK+ N++QI++KRN + EIE+DID +D ET WELDRFV
Sbjct: 156 TLEEKNLLRVGLESLPEEKMHNVLQIVRKRNGNPELVGGEIELDIDEMDVETQWELDRFV 215
Query: 613 TNYKKSLSKNKRKA 626
+KK+L+K++R A
Sbjct: 216 NKFKKALNKSRRAA 229
>gi|356560521|ref|XP_003548540.1| PREDICTED: transcription factor GTE8-like [Glycine max]
Length = 740
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 107/289 (37%), Positives = 153/289 (52%), Gaps = 33/289 (11%)
Query: 342 PAESNKKSKLNGKKQAGNELAHGFGTGSKIFKSCSALLEKLMKHKHGWVFNAPVDVKNLG 401
P E N+ S +GK ++ + + + K C LL++LM H++GWVF PVDV L
Sbjct: 150 PREWNRGS--SGKFESATRTSLLSAANALLMKDCELLLKRLMSHQYGWVFKTPVDVVKLK 207
Query: 402 LHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQL 461
L DYF+II+HPMDLGTVK+++ Y P EFA+DVRLTF NAM YNP+G DVH+MA+ L
Sbjct: 208 LPDYFSIIKHPMDLGTVKSKIAAGEYAGPIEFADDVRLTFSNAMIYNPRGNDVHVMADTL 267
Query: 462 LKIFEDKWVVIESEYNREMRIGADYEMGFHTPTSRKAPPLPPPLDMRRILDRSESITHPM 521
K FE +W IE + R R P P D I T PM
Sbjct: 268 SKYFELRWKAIEKKLPR-----------------RDDVPFPSKPDTYVI-----KTTRPM 305
Query: 522 -DSRLKPISTTPSSRTPAPKKPKAKDPHKRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIK 580
S+ + IST P +P P K+ M+ EK L L+SL E +I+ +K
Sbjct: 306 PPSKKRKISTLPC-------QPVVMPPAKKVMSDQEKHNLGIELESLLGEMPMHIIDFLK 358
Query: 581 KRNSSLFQH-DDEIEVDIDSVDAETLWELDRFVTNYKKSLSKNKRKAEL 628
+ S+ + +DE+E+DID + +TL+ L + + ++ N+ K E+
Sbjct: 359 ENCSNGEECGEDELEIDIDDLKDDTLFALRKLLDDFLLEKQMNETKVEV 407
>gi|297734375|emb|CBI15622.3| unnamed protein product [Vitis vinifera]
Length = 700
Score = 175 bits (443), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 104/290 (35%), Positives = 149/290 (51%), Gaps = 60/290 (20%)
Query: 341 PPAESNKKSK--LNGKKQAGNELAHGFGTGSKIFKSCSALLEKLMKHKHGWVFNAPVDVK 398
PP + K K L+G+ ++ + A + S + K C LL +LM H+ GW+FN PVDV
Sbjct: 128 PPGRNVPKMKRGLSGRFESVKQAAPPGTSNSMLMKQCETLLSRLMTHQFGWIFNNPVDVV 187
Query: 399 NLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMA 458
L + DYFT+I+HPMDLGT+K+++ Y SP +FA DVRLTF NAMTYNP+G DVH MA
Sbjct: 188 ELKIPDYFTVIKHPMDLGTIKSKMASGEYLSPFDFAADVRLTFSNAMTYNPRGNDVHFMA 247
Query: 459 EQLLKIFEDKWVVIESEYNREMRIGADYEMGFHTPTSRKAPPLPPPLDMRRILDRSESIT 518
E L K FE +W P +K P +
Sbjct: 248 ETLNKFFEMRW----------------------KPIEKKLPKV----------------- 268
Query: 519 HPMDSRLKPISTTPSSRTPAPKKPKAKDPHKRDMTYDEKQKLSTNLQSLPSEKLDNIVQI 578
P D ++K +P+KR MT +E+ L T L++L E D+IV
Sbjct: 269 APTDHKIK------------------MEPNKRIMTKEERHNLGTELETLLGELPDDIVDF 310
Query: 579 IKKRNSSLFQ-HDDEIEVDIDSVDAETLWELDRFVTNYKKSLSKNKRKAE 627
+K+++ + Q +DEIE+DID++ +TL+ L + + Y KN K E
Sbjct: 311 LKEQSFNENQASEDEIEIDIDALSDDTLFTLRKLLDGYLLEKQKNLTKTE 360
>gi|357144694|ref|XP_003573382.1| PREDICTED: transcription factor GTE10-like [Brachypodium
distachyon]
Length = 488
Score = 173 bits (439), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 100/258 (38%), Positives = 143/258 (55%), Gaps = 22/258 (8%)
Query: 373 KSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKE 432
K C+ +L K+ K ++ FN PVDV+ L LHDY +IR+PMDLGTVK L Y S +
Sbjct: 134 KRCAQILTKIRKQRNSVWFNKPVDVERLKLHDYHAVIRNPMDLGTVKENLTAGRYHSHEA 193
Query: 433 FAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK------WVVIESEYNREMRIGADY 486
FA+DVRLTF+NA+ YNP G VH A LL FE W E E+ M++
Sbjct: 194 FADDVRLTFNNALRYNPVGHQVHRSAGSLLASFEGMYGEAVSWFEQECEHFEPMQLALPP 253
Query: 487 EMGFHTPTSRKAPPLPPPLDMRRILDRSESITHPMDSRLKPISTTPSSRTPAPKKPKAKD 546
P + + RL+ R P KPKA++
Sbjct: 254 PPMLALPPPPQP-------------LVPVPVRVSPVPRLQEPPRMGPGRRP---KPKARE 297
Query: 547 PHKRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLW 606
P+KR+M+ +EK KL +++LP EK++N++QI++KR+S + +E+D D +D +TLW
Sbjct: 298 PNKREMSDEEKHKLRVEIENLPEEKMENVLQIVQKRSSDPALMGEVVELDFDEMDVDTLW 357
Query: 607 ELDRFVTNYKKSLSKNKR 624
ELDRFV N+KK+L KN++
Sbjct: 358 ELDRFVVNWKKALKKNRQ 375
>gi|449440580|ref|XP_004138062.1| PREDICTED: transcription factor GTE10-like [Cucumis sativus]
gi|449501388|ref|XP_004161353.1| PREDICTED: transcription factor GTE10-like [Cucumis sativus]
Length = 781
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 97/254 (38%), Positives = 137/254 (53%), Gaps = 46/254 (18%)
Query: 372 FKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPK 431
K C LL++LM H GWVFN PVDV L + DYFT+I+HPMDLGTVK++L Y P
Sbjct: 206 LKQCEQLLQRLMSHTFGWVFNTPVDVVKLNIPDYFTVIKHPMDLGTVKSKLTAGEYTHPL 265
Query: 432 EFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEY---NREMRIGADYEM 488
+FA DVRLTF NAMTYNP DVH MA+ L K FE +W IE ++ E R
Sbjct: 266 DFAADVRLTFSNAMTYNPPANDVHTMAKTLSKFFEVRWKTIEKKFPTTTEEQR------- 318
Query: 489 GFHTPTSRKAP-------PLPPPLDMRRILDRSESITHPMDSRLKPISTTPSSRTPAPKK 541
P++ P P+PPP +++ T+ D ++P S
Sbjct: 319 --QVPSATTVPKEAESALPVPPP-------KKTKFPTN--DPDVQPTSVV---------- 357
Query: 542 PKAKDPHKRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVD 601
+ MT EK KLS L++L E ++I+ +K+ +S+ +DEIE+DID++
Sbjct: 358 --------KVMTDQEKHKLSVELEALLGELPESIINFLKEHSSNSQAGEDEIEIDIDALS 409
Query: 602 AETLWELDRFVTNY 615
+TL+ L + + +Y
Sbjct: 410 DDTLFALRKLLDDY 423
>gi|449455878|ref|XP_004145677.1| PREDICTED: transcription factor GTE8-like [Cucumis sativus]
Length = 750
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 119/354 (33%), Positives = 189/354 (53%), Gaps = 42/354 (11%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN 425
T + + K C LL+++M H++ WVFN PVDV L L DYFTII+HPMDLGTVK++L+
Sbjct: 180 ATSAILMKQCEQLLKRVMSHQYAWVFNTPVDVVKLNLPDYFTIIKHPMDLGTVKSKLSSG 239
Query: 426 WYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGAD 485
Y SP +F DVRLTF NAMTYNP G DVH+MA+ L F+ +W IE + + D
Sbjct: 240 AYSSPLDFLADVRLTFSNAMTYNPPGNDVHVMADVLNSYFDMRWKAIEKKLPK-----TD 294
Query: 486 YEMGFHTPTSRKAPPLPPPLDMRRILDRSESITHPMDSRLKPISTTPSSRTPAPKKPKAK 545
G PT + P D+ E++ + ++K +++ P TP P
Sbjct: 295 ---GHSLPTKSR-----PREDV-------ETVKNVPLKKMK-VASRPQEVTPIPS----- 333
Query: 546 DPHKRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQH-DDEIEVDIDSVDAET 604
K MT +EK L L+SL E +I+ +++++S + +DE E+DID + +T
Sbjct: 334 ---KLVMTDEEKLSLGRELESLLGEMPLHIIDFLREQSSGGRECGEDEFEIDIDDLSDDT 390
Query: 605 LWELDRFVTNYKKSLSKNKRKAE-LANQARAVAQQNVQQQTPAPVVTEVRKEIRTDDRIG 663
L++L + + ++ + KN AE + + + V + P ++ + I D G
Sbjct: 391 LFKLRKLLDDHFQEKQKNNASAEPCVIELQMLNDSGVSNSSMQP--SKGSEPIDEDLNGG 448
Query: 664 ------STSSPVQVEKQVDNG---SRSSSSSSSSSDSGSSSSDSDSETSSSGSE 708
S+ +P+++E+ + +R +SS +S DS SS S++DSE + S+
Sbjct: 449 GNEAPVSSCAPMEIERSAMDAIHRNRKCTSSRNSKDSDSSCSENDSECGKTPSQ 502
>gi|449492943|ref|XP_004159148.1| PREDICTED: transcription factor GTE9-like [Cucumis sativus]
Length = 491
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 119/354 (33%), Positives = 189/354 (53%), Gaps = 42/354 (11%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN 425
T + + K C LL+++M H++ WVFN PVDV L L DYFTII+HPMDLGTVK++L+
Sbjct: 131 ATSAILMKQCEQLLKRVMSHQYAWVFNTPVDVVKLNLPDYFTIIKHPMDLGTVKSKLSSG 190
Query: 426 WYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGAD 485
Y SP +F DVRLTF NAMTYNP G DVH+MA+ L F+ +W IE + + D
Sbjct: 191 AYSSPLDFLADVRLTFSNAMTYNPPGNDVHVMADVLNSYFDMRWKAIEKKLPK-----TD 245
Query: 486 YEMGFHTPTSRKAPPLPPPLDMRRILDRSESITHPMDSRLKPISTTPSSRTPAPKKPKAK 545
G PT + P D+ E++ + ++K +++ P TP P
Sbjct: 246 ---GHSLPTKSR-----PREDV-------ETVKNVPLKKMK-VASRPQEVTPIPS----- 284
Query: 546 DPHKRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQH-DDEIEVDIDSVDAET 604
K MT +EK L L+SL E +I+ +++++S + +DE E+DID + +T
Sbjct: 285 ---KLVMTDEEKLSLGRELESLLGEMPLHIIDFLREQSSGGRECGEDEFEIDIDDLSDDT 341
Query: 605 LWELDRFVTNYKKSLSKNKRKAE-LANQARAVAQQNVQQQTPAPVVTEVRKEIRTDDRIG 663
L++L + + ++ + KN AE + + + V + P ++ + I D G
Sbjct: 342 LFKLRKLLDDHFQEKQKNNASAEPCVIELQMLNDSGVSNSSMQP--SKGSEPIDEDLNGG 399
Query: 664 ------STSSPVQVEKQVDNG---SRSSSSSSSSSDSGSSSSDSDSETSSSGSE 708
S+ +P+++E+ + +R +SS +S DS SS S++DSE + S+
Sbjct: 400 GNEAPVSSCAPMEIERSAMDAIHRNRKCTSSRNSKDSDSSCSENDSECGKTPSQ 453
>gi|297814970|ref|XP_002875368.1| hypothetical protein ARALYDRAFT_484508 [Arabidopsis lyrata subsp.
lyrata]
gi|297321206|gb|EFH51627.1| hypothetical protein ARALYDRAFT_484508 [Arabidopsis lyrata subsp.
lyrata]
Length = 814
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 100/249 (40%), Positives = 130/249 (52%), Gaps = 34/249 (13%)
Query: 371 IFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSP 430
+ K C LL+KL H H WVF APVDV L + DY TII+HPMDLGTVK L Y SP
Sbjct: 176 LMKQCDTLLKKLWSHPHSWVFQAPVDVVKLNIPDYLTIIKHPMDLGTVKKNLASGVYSSP 235
Query: 431 KEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEMGF 490
EFA DVRLTF NAMTYNP G DVHIM + L K+FE +W IE +
Sbjct: 236 HEFAADVRLTFTNAMTYNPPGHDVHIMGDILSKLFEARWKTIEKKL-------------- 281
Query: 491 HTPTSRKAPPLPPPLDMRRILDRSESIT-HPMDSRLKPISTTPSS--RTPAPKKPKAKDP 547
P M+ + +IT P D R IS P+ + +P + +P
Sbjct: 282 ------------PACSMQTL----PAITLEPNDERKAAISVPPAKKRKMASPVRESVPEP 325
Query: 548 HKRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQ-HDDEIEVDIDSVDAETLW 606
K MT +E+ +L L+SL E +I+ +KK +S+ + +DEIE+DID + E L
Sbjct: 326 VKPLMTAEERHRLGRQLESLLDELPAHIIDFLKKHSSNGGEIAEDEIEIDIDVLSDEVLV 385
Query: 607 ELDRFVTNY 615
L + Y
Sbjct: 386 TLRNLLDEY 394
>gi|296090258|emb|CBI40077.3| unnamed protein product [Vitis vinifera]
Length = 714
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 115/340 (33%), Positives = 176/340 (51%), Gaps = 45/340 (13%)
Query: 371 IFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSP 430
+ K C LL++LM H+HGWVFN PVD+ L + DYFTII+HPMDLGT+K ++ Y SP
Sbjct: 151 LMKQCETLLKQLMSHQHGWVFNEPVDIVKLNIPDYFTIIKHPMDLGTIKGKIASGAYSSP 210
Query: 431 KEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEMGF 490
+FA DVRLTF NA T+NP G DVH MA+ L K FE +W IE + + G
Sbjct: 211 LDFAADVRLTFSNAQTFNPPGNDVHKMADTLSKFFEVRWKTIEKKLPVTKTQSLPGKYGT 270
Query: 491 HTPTSRKAPPLPPPLDMRRILDRSESITHPMDSRLKPISTTPSSRTPAPKKPKAKDPHKR 550
H + A P+PP S+ + +++T ++P ++
Sbjct: 271 HGEM-KTAKPMPP-------------------SKKRKVTST--------HHEVIQEPVQK 302
Query: 551 DMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQ--HDDEIEVDIDSVDAETLWEL 608
MT DEK+ L +L+ L E I+ ++ +S+ + DDEIEVDI+++ +TL+ L
Sbjct: 303 VMTADEKRNLGRDLEDLLGEIPVQIIDFLRVHSSNGRETGEDDEIEVDIEALSDDTLFTL 362
Query: 609 DRFVTNYKKSLSKNKRKAELAN----QARAVAQQNVQQQTPAPVVTEVRKEIRTDDRIG- 663
+ + +Y + K+ KAE + ++Q P V ++I D +G
Sbjct: 363 RKLLDDYLQEKQKSHGKAEPCEIELLHDSGPSNSSIQ---PCKGNDPVEEDI---DIVGN 416
Query: 664 ----STSSPVQVEKQVDNGSRSSSSSSSSSDSGSSSSDSD 699
S+ PV++EK ++ S S S S+ +SSS+S+
Sbjct: 417 EAPVSSYPPVEIEKDTEHRSSKCVLSRSFSEPDNSSSESE 456
>gi|359488601|ref|XP_002270843.2| PREDICTED: transcription factor GTE8-like [Vitis vinifera]
Length = 739
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 96/259 (37%), Positives = 142/259 (54%), Gaps = 30/259 (11%)
Query: 371 IFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSP 430
+ K C LL++LM H+HGWVFN PVD+ L + DYFTII+HPMDLGT+K ++ Y SP
Sbjct: 174 LMKQCETLLKQLMSHQHGWVFNEPVDIVKLNIPDYFTIIKHPMDLGTIKGKIASGAYSSP 233
Query: 431 KEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEMGF 490
+FA DVRLTF NA T+NP G DVH MA+ L K FE +W IE + + G
Sbjct: 234 LDFAADVRLTFSNAQTFNPPGNDVHKMADTLSKFFEVRWKTIEKKLPVTKTQSLPGKYGT 293
Query: 491 HTPTSRKAPPLPPPLDMRRILDRSESITHPMDSRLKPISTTPSSRTPAPKKPKAKDPHKR 550
H + A P+PP S+ + +++T ++P ++
Sbjct: 294 HGEM-KTAKPMPP-------------------SKKRKVTST--------HHEVIQEPVQK 325
Query: 551 DMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQ--HDDEIEVDIDSVDAETLWEL 608
MT DEK+ L +L+ L E I+ ++ +S+ + DDEIEVDI+++ +TL+ L
Sbjct: 326 VMTADEKRNLGRDLEDLLGEIPVQIIDFLRVHSSNGRETGEDDEIEVDIEALSDDTLFTL 385
Query: 609 DRFVTNYKKSLSKNKRKAE 627
+ + +Y + K+ KAE
Sbjct: 386 RKLLDDYLQEKQKSHGKAE 404
>gi|9294219|dbj|BAB02121.1| unnamed protein product [Arabidopsis thaliana]
Length = 818
Score = 169 bits (429), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 99/249 (39%), Positives = 128/249 (51%), Gaps = 34/249 (13%)
Query: 371 IFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSP 430
+ K C LL KL H H WVF APVDV L + DY T I+HPMDLGTVK L Y SP
Sbjct: 176 LMKQCDTLLRKLWSHPHSWVFQAPVDVVKLNIPDYLTTIKHPMDLGTVKKNLASGVYSSP 235
Query: 431 KEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEMGF 490
EFA DVRLTF NAMTYNP G DVHIM + L K+FE +W I+ +
Sbjct: 236 HEFAADVRLTFTNAMTYNPPGHDVHIMGDILSKLFEARWKTIKKKL-------------- 281
Query: 491 HTPTSRKAPPLPPPLDMRRILDRSESIT-HPMDSRLKPISTTPSS--RTPAPKKPKAKDP 547
PP M+ + ++T P D R IS P+ + +P + +P
Sbjct: 282 ------------PPCSMQTL----PAVTLEPNDERKAAISVPPAKKRKMASPVRESVPEP 325
Query: 548 HKRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQ-HDDEIEVDIDSVDAETLW 606
K MT E+ +L L+SL E +I+ +KK NS+ + +DEIE+DID + E L
Sbjct: 326 VKPLMTEVERHRLGRQLESLLDELPAHIIDFLKKHNSNGGEIAEDEIEIDIDVLSDEVLV 385
Query: 607 ELDRFVTNY 615
L + Y
Sbjct: 386 TLRNLLDEY 394
>gi|15232127|ref|NP_189362.1| global transcription factor group E8 [Arabidopsis thaliana]
gi|327488239|sp|Q9LK27.2|GTE8_ARATH RecName: Full=Transcription factor GTE8; AltName:
Full=Bromodomain-containing protein GTE8; AltName:
Full=Protein GLOBAL TRANSCRIPTION FACTOR GROUP E8
gi|332643763|gb|AEE77284.1| global transcription factor group E8 [Arabidopsis thaliana]
Length = 813
Score = 169 bits (429), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 99/249 (39%), Positives = 128/249 (51%), Gaps = 34/249 (13%)
Query: 371 IFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSP 430
+ K C LL KL H H WVF APVDV L + DY T I+HPMDLGTVK L Y SP
Sbjct: 176 LMKQCDTLLRKLWSHPHSWVFQAPVDVVKLNIPDYLTTIKHPMDLGTVKKNLASGVYSSP 235
Query: 431 KEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEMGF 490
EFA DVRLTF NAMTYNP G DVHIM + L K+FE +W I+ +
Sbjct: 236 HEFAADVRLTFTNAMTYNPPGHDVHIMGDILSKLFEARWKTIKKKL-------------- 281
Query: 491 HTPTSRKAPPLPPPLDMRRILDRSESIT-HPMDSRLKPISTTPSS--RTPAPKKPKAKDP 547
PP M+ + ++T P D R IS P+ + +P + +P
Sbjct: 282 ------------PPCSMQTL----PAVTLEPNDERKAAISVPPAKKRKMASPVRESVPEP 325
Query: 548 HKRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQ-HDDEIEVDIDSVDAETLW 606
K MT E+ +L L+SL E +I+ +KK NS+ + +DEIE+DID + E L
Sbjct: 326 VKPLMTEVERHRLGRQLESLLDELPAHIIDFLKKHNSNGGEIAEDEIEIDIDVLSDEVLV 385
Query: 607 ELDRFVTNY 615
L + Y
Sbjct: 386 TLRNLLDEY 394
>gi|334185652|ref|NP_001189985.1| global transcription factor group E8 [Arabidopsis thaliana]
gi|332643764|gb|AEE77285.1| global transcription factor group E8 [Arabidopsis thaliana]
Length = 764
Score = 169 bits (427), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 99/249 (39%), Positives = 128/249 (51%), Gaps = 34/249 (13%)
Query: 371 IFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSP 430
+ K C LL KL H H WVF APVDV L + DY T I+HPMDLGTVK L Y SP
Sbjct: 127 LMKQCDTLLRKLWSHPHSWVFQAPVDVVKLNIPDYLTTIKHPMDLGTVKKNLASGVYSSP 186
Query: 431 KEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEMGF 490
EFA DVRLTF NAMTYNP G DVHIM + L K+FE +W I+ +
Sbjct: 187 HEFAADVRLTFTNAMTYNPPGHDVHIMGDILSKLFEARWKTIKKKL-------------- 232
Query: 491 HTPTSRKAPPLPPPLDMRRILDRSESIT-HPMDSRLKPISTTPSS--RTPAPKKPKAKDP 547
PP M+ + ++T P D R IS P+ + +P + +P
Sbjct: 233 ------------PPCSMQTL----PAVTLEPNDERKAAISVPPAKKRKMASPVRESVPEP 276
Query: 548 HKRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQ-HDDEIEVDIDSVDAETLW 606
K MT E+ +L L+SL E +I+ +KK NS+ + +DEIE+DID + E L
Sbjct: 277 VKPLMTEVERHRLGRQLESLLDELPAHIIDFLKKHNSNGGEIAEDEIEIDIDVLSDEVLV 336
Query: 607 ELDRFVTNY 615
L + Y
Sbjct: 337 TLRNLLDEY 345
>gi|7573452|emb|CAB87766.1| kinase-like protein [Arabidopsis thaliana]
Length = 703
Score = 168 bits (426), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 112/345 (32%), Positives = 169/345 (48%), Gaps = 35/345 (10%)
Query: 371 IFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSP 430
+ K C ALL++LM H++GWVFN PVDV L + DYF +I HPMDLGTVK +L Y P
Sbjct: 137 LMKQCEALLKRLMSHQYGWVFNTPVDVVKLNILDYFNVIEHPMDLGTVKNKLTSGTYSCP 196
Query: 431 KEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEMGF 490
EFA DVRLTF NAMTYNP G DV++MA+ L K FE +W +E +
Sbjct: 197 SEFAADVRLTFSNAMTYNPPGNDVYVMADTLRKFFEVRWKTLEKKL-------------- 242
Query: 491 HTPTSRKAPPLPPPLDMRRILDRSESITHPMDSRLKPISTTPSSRTPAPKKPKAKDPHKR 550
+ K P LD H + P+ +T A DP KR
Sbjct: 243 ---SGTKVHTEPSNLD-----------AHKEKHIVIPVPMAKKRKTTAVDCENVVDPAKR 288
Query: 551 DMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQ-HDDEIEVDIDSVDAETLWELD 609
MT +++ KL +L+SL +E ++ ++ NS+ DDEIE+DI+ + L++L
Sbjct: 289 VMTDEDRLKLGKDLESL-TEFPAQLINFLRDHNSNEGGIGDDEIEIDINDLSDHALFQLR 347
Query: 610 RFVTNYKKSLSKNK---RKAELANQARAVAQQNVQQQTPAPVVTEVRKEIRTDDRIGSTS 666
+ + + + K E+ +V + Q + + +I ++ S+
Sbjct: 348 DLLDEHLREIQNKKSSVEPCEIELLHGSVPGNSSMQHCDGSELDDEVVDIGENEHPTSSI 407
Query: 667 SPVQVEKQVDNGSRSSSSSSSSSDSGSSSSDSDSETSSSGSEGGN 711
SPV +EK + G+ + ++D SS D+ + +S GS G+
Sbjct: 408 SPVTIEKDLVLGNSNDYPLGCTTD--CSSFDAYNLGNSLGSVSGD 450
>gi|115475161|ref|NP_001061177.1| Os08g0192800 [Oryza sativa Japonica Group]
gi|40253661|dbj|BAD05604.1| putative RNA-binding protein Virp1a [Oryza sativa Japonica Group]
gi|113623146|dbj|BAF23091.1| Os08g0192800 [Oryza sativa Japonica Group]
gi|215678743|dbj|BAG95180.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765310|dbj|BAG87007.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767863|dbj|BAH00092.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222640052|gb|EEE68184.1| hypothetical protein OsJ_26323 [Oryza sativa Japonica Group]
Length = 481
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 112/294 (38%), Positives = 148/294 (50%), Gaps = 45/294 (15%)
Query: 373 KSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKE 432
K C+ +L +L K K FN+PVDV+ L LHDY IIR+PMDLGTVK L Y S +
Sbjct: 139 KRCTQILTRLRKQKISVWFNSPVDVERLKLHDYHAIIRNPMDLGTVKENLAFGRYPSHEA 198
Query: 433 FAEDVRLTFHNAMTYNPKGQDVHIMAEQLLK----IFEDKWVVIESEYNREMRIGADYEM 488
FA DVRLTF NA+ YNP VH A LL ++++ E E R
Sbjct: 199 FATDVRLTFSNALRYNPADHHVHRYASNLLATFEGLYKEALSWFEQECQRLEPPMPLALP 258
Query: 489 GFHTPTSRKAPPLPPPLDMRRILDRSESITHPMDSRLKPISTTPSSRTPAPKKPKAKDPH 548
P PP RI R P KPKA++P+
Sbjct: 259 PPPQPPVPMPMQAPP-----RI--------------------GGGGRRP---KPKAREPN 290
Query: 549 KRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWEL 608
KR+M+ +EK KL + +LP EK+ N++QI++KRN+ + +E+D D +D ETLWEL
Sbjct: 291 KREMSDEEKHKLRVEIGNLPEEKMGNVLQIVQKRNTDPALMGEVVELDFDEMDVETLWEL 350
Query: 609 DRFVTNYKKSLSKNKRKAEL---ANQARAV-------AQQNVQQQTPAPVVTEV 652
DRFV N KK+LSK++R + A A A+ Q NV Q P V E+
Sbjct: 351 DRFVVNCKKALSKSRRTVAMNGDAVDATAIVPTEDDTVQVNVHHQ---PSVVEI 401
>gi|218200605|gb|EEC83032.1| hypothetical protein OsI_28113 [Oryza sativa Indica Group]
Length = 481
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 112/294 (38%), Positives = 148/294 (50%), Gaps = 45/294 (15%)
Query: 373 KSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKE 432
K C+ +L +L K K FN+PVDV+ L LHDY IIR+PMDLGTVK L Y S +
Sbjct: 139 KRCTQILTRLRKQKISVWFNSPVDVERLKLHDYHAIIRNPMDLGTVKENLAFGRYPSHEA 198
Query: 433 FAEDVRLTFHNAMTYNPKGQDVHIMAEQLLK----IFEDKWVVIESEYNREMRIGADYEM 488
FA DVRLTF NA+ YNP VH A LL ++++ E E R
Sbjct: 199 FAADVRLTFSNALRYNPADHHVHRYASNLLATFEGLYKEALSWFEQECQRLEPPMPLALP 258
Query: 489 GFHTPTSRKAPPLPPPLDMRRILDRSESITHPMDSRLKPISTTPSSRTPAPKKPKAKDPH 548
P PP RI R P KPKA++P+
Sbjct: 259 PPPQPPVPMPMQAPP-----RI--------------------GGGGRRP---KPKAREPN 290
Query: 549 KRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWEL 608
KR+M+ +EK KL + +LP EK+ N++QI++KRN+ + +E+D D +D ETLWEL
Sbjct: 291 KREMSDEEKHKLRVEIGNLPEEKMGNVLQIVQKRNTDPALMGEVVELDFDEMDVETLWEL 350
Query: 609 DRFVTNYKKSLSKNKRKAEL---ANQARAV-------AQQNVQQQTPAPVVTEV 652
DRFV N KK+LSK++R + A A A+ Q NV Q P V E+
Sbjct: 351 DRFVVNCKKALSKSRRTVAMNGDAVDATAIVPIEDDTVQVNVHHQ---PSVVEI 401
>gi|18417335|ref|NP_568297.1| bromodomain and extraterminal domain protein 9 [Arabidopsis
thaliana]
gi|75163656|sp|Q93YS6.1|GTE9_ARATH RecName: Full=Transcription factor GTE9; AltName: Full=BROMODOMAIN
AND EXTRATERMINAL DOMAIN PROTEIN 9; Short=AtBET9;
AltName: Full=Bromodomain-containing protein GTE9;
AltName: Full=Protein GLOBAL TRANSCRIPTION FACTOR GROUP
E9
gi|16604681|gb|AAL24133.1| putative kinase [Arabidopsis thaliana]
gi|332004627|gb|AED92010.1| bromodomain and extraterminal domain protein 9 [Arabidopsis
thaliana]
Length = 688
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 111/330 (33%), Positives = 161/330 (48%), Gaps = 34/330 (10%)
Query: 371 IFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSP 430
+ K C ALL++LM H++GWVFN PVDV L + DYF +I HPMDLGTVK +L Y P
Sbjct: 137 LMKQCEALLKRLMSHQYGWVFNTPVDVVKLNILDYFNVIEHPMDLGTVKNKLTSGTYSCP 196
Query: 431 KEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEMGF 490
EFA DVRLTF NAMTYNP G DV++MA+ L K FE +W +E +
Sbjct: 197 SEFAADVRLTFSNAMTYNPPGNDVYVMADTLRKFFEVRWKTLEKKL-------------- 242
Query: 491 HTPTSRKAPPLPPPLDMRRILDRSESITHPMDSRLKPISTTPSSRTPAPKKPKAKDPHKR 550
+ K P LD H + P+ +T A DP KR
Sbjct: 243 ---SGTKVHTEPSNLD-----------AHKEKHIVIPVPMAKKRKTTAVDCENVVDPAKR 288
Query: 551 DMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQ-HDDEIEVDIDSVDAETLWELD 609
MT +++ KL +L+SL +E ++ ++ NS+ DDEIE+DI+ + L++L
Sbjct: 289 VMTDEDRLKLGKDLESL-TEFPAQLINFLRDHNSNEGGIGDDEIEIDINDLSDHALFQLR 347
Query: 610 RFVTNYKKSLSKNK---RKAELANQARAVAQQNVQQQTPAPVVTEVRKEIRTDDRIGSTS 666
+ + + + K E+ +V + Q + + +I ++ S+
Sbjct: 348 DLLDEHLREIQNKKSSVEPCEIELLHGSVPGNSSMQHCDGSELDDEVVDIGENEHPTSSI 407
Query: 667 SPVQVEKQVDNG-SRSSSSSSSSSDSGSSS 695
SPV +EK + G S +S S S D SS
Sbjct: 408 SPVTIEKDLVLGNSNGNSLGSVSGDPKMSS 437
>gi|222422933|dbj|BAH19453.1| AT5G14270 [Arabidopsis thaliana]
Length = 549
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 107/323 (33%), Positives = 159/323 (49%), Gaps = 33/323 (10%)
Query: 371 IFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSP 430
+ K C ALL++LM H++GWVFN PVDV L + DYF +I HPMDLGTVK +L Y P
Sbjct: 137 LMKQCEALLKRLMSHQYGWVFNTPVDVVKLNILDYFNVIEHPMDLGTVKNKLTSGTYSCP 196
Query: 431 KEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEMGF 490
EFA DVRLTF NAMTYNP G DV++MA+ L K FE +W +E +
Sbjct: 197 SEFAADVRLTFSNAMTYNPPGNDVYVMADTLRKFFEVRWKTLEKKL-------------- 242
Query: 491 HTPTSRKAPPLPPPLDMRRILDRSESITHPMDSRLKPISTTPSSRTPAPKKPKAKDPHKR 550
+ K P LD H + P+ +T A DP KR
Sbjct: 243 ---SGTKVHTEPSNLD-----------AHKEKHIVIPVPMAKKRKTTAVDCENVVDPAKR 288
Query: 551 DMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQ-HDDEIEVDIDSVDAETLWELD 609
MT +++ KL +L+SL +E ++ ++ NS+ DDEIE+DI+ + L++L
Sbjct: 289 VMTDEDRLKLGKDLESL-TEFPAQLINFLRDHNSNEGGIGDDEIEIDINDLSDHALFQLR 347
Query: 610 RFVTNYKKSLSKNK---RKAELANQARAVAQQNVQQQTPAPVVTEVRKEIRTDDRIGSTS 666
+ + + + K E+ +V + Q + + +I ++ S+
Sbjct: 348 DLLDEHLREIQNKKSSVEPCEIELLHGSVPGNSSMQHCDGSELDDEVVDIGENEHPTSSI 407
Query: 667 SPVQVEKQVDNGSRSSSSSSSSS 689
SPV +EK + G+ + +S S S
Sbjct: 408 SPVTIEKDLVLGNSNGNSLGSVS 430
>gi|334187679|ref|NP_001190308.1| bromodomain and extraterminal domain protein 9 [Arabidopsis
thaliana]
gi|332004628|gb|AED92011.1| bromodomain and extraterminal domain protein 9 [Arabidopsis
thaliana]
Length = 689
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 111/330 (33%), Positives = 161/330 (48%), Gaps = 34/330 (10%)
Query: 371 IFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSP 430
+ K C ALL++LM H++GWVFN PVDV L + DYF +I HPMDLGTVK +L Y P
Sbjct: 137 LMKQCEALLKRLMSHQYGWVFNTPVDVVKLNILDYFNVIEHPMDLGTVKNKLTSGTYSCP 196
Query: 431 KEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEMGF 490
EFA DVRLTF NAMTYNP G DV++MA+ L K FE +W +E +
Sbjct: 197 SEFAADVRLTFSNAMTYNPPGNDVYVMADTLRKFFEVRWKTLEKKL-------------- 242
Query: 491 HTPTSRKAPPLPPPLDMRRILDRSESITHPMDSRLKPISTTPSSRTPAPKKPKAKDPHKR 550
+ K P LD H + P+ +T A DP KR
Sbjct: 243 ---SGTKVHTEPSNLD-----------AHKEKHIVIPVPMAKKRKTTAVDCENVVDPAKR 288
Query: 551 DMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQ-HDDEIEVDIDSVDAETLWELD 609
MT +++ KL +L+SL +E ++ ++ NS+ DDEIE+DI+ + L++L
Sbjct: 289 VMTDEDRLKLGKDLESL-TEFPAQLINFLRDHNSNEGGIGDDEIEIDINDLSDHALFQLR 347
Query: 610 RFVTNYKKSLSKNK---RKAELANQARAVAQQNVQQQTPAPVVTEVRKEIRTDDRIGSTS 666
+ + + + K E+ +V + Q + + +I ++ S+
Sbjct: 348 DLLDEHLREIQNKKSSVEPCEIELLHGSVPGNSSMQHCDGSELDDEVVDIGENEHPTSSI 407
Query: 667 SPVQVEKQVDNG-SRSSSSSSSSSDSGSSS 695
SPV +EK + G S +S S S D SS
Sbjct: 408 SPVTIEKDLVLGNSNGNSLGSVSGDPKMSS 437
>gi|17064912|gb|AAL32610.1| Unknown protein [Arabidopsis thaliana]
gi|20259928|gb|AAM13311.1| unknown protein [Arabidopsis thaliana]
Length = 503
Score = 167 bits (422), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 98/249 (39%), Positives = 128/249 (51%), Gaps = 34/249 (13%)
Query: 371 IFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSP 430
+ K C LL KL H H WVF APVDV L + DY T I+HPMDLGTVK L Y SP
Sbjct: 176 LMKQCDTLLRKLWSHPHSWVFQAPVDVVKLNIPDYLTTIKHPMDLGTVKKNLASGVYSSP 235
Query: 431 KEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEMGF 490
EFA DVRLTF +AMTYNP G DVHIM + L K+FE +W I+ +
Sbjct: 236 HEFAADVRLTFTDAMTYNPPGHDVHIMGDILSKLFEARWKTIKKKL-------------- 281
Query: 491 HTPTSRKAPPLPPPLDMRRILDRSESIT-HPMDSRLKPISTTPSS--RTPAPKKPKAKDP 547
PP M+ + ++T P D R IS P+ + +P + +P
Sbjct: 282 ------------PPCSMQTL----PAVTLEPNDERKAAISVPPAKKRKMASPVRESVPEP 325
Query: 548 HKRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQ-HDDEIEVDIDSVDAETLW 606
K MT E+ +L L+SL E +I+ +KK NS+ + +DEIE+DID + E L
Sbjct: 326 VKPLMTEVERHRLGRQLESLLDELPAHIIDFLKKHNSNGGEIAEDEIEIDIDVLSDEVLV 385
Query: 607 ELDRFVTNY 615
L + Y
Sbjct: 386 TLRNLLDEY 394
>gi|440790084|gb|ELR11372.1| Bromodomain containing protein [Acanthamoeba castellanii str. Neff]
Length = 844
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 93/249 (37%), Positives = 139/249 (55%), Gaps = 24/249 (9%)
Query: 364 GFGTGSKIFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLN 423
G + S K C LL+ LM HK GW FN PVD L + DYF +I+HPMDLGT+K +L+
Sbjct: 133 GPASLSWALKQCQVLLKTLMTHKFGWPFNQPVDPIALNIPDYFDVIKHPMDLGTIKEQLD 192
Query: 424 KNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIG 483
Y++ +EFAEDVRL F N TYN G D+ +MA L +F +K+ +++++ G
Sbjct: 193 SGSYETEEEFAEDVRLVFTNTFTYNQPGSDIVVMASTLSSLFNEKFEILKAKIEER---G 249
Query: 484 ADYEMGFHTPTSRKAPPLPPPLDMRRILDRSESITHPMDSRLKPISTTPSSRTPAPKKPK 543
D G ++ + D S+ L+ I TP+ R A +
Sbjct: 250 RDAPEGVEE-------------TLKELRDSMSSVQR----ELERIKKTPNGR--AGRAGA 290
Query: 544 AKDPHKRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAE 603
A+D +R MT++EK+KLS + +LPS+ L +V+II +R L +EIE+DID+++
Sbjct: 291 AED--QRPMTFEEKKKLSHAINNLPSDNLGMVVKIIHERMPQLTSSGEEIEIDIDALNPA 348
Query: 604 TLWELDRFV 612
TL L+R+V
Sbjct: 349 TLRHLERYV 357
>gi|297807455|ref|XP_002871611.1| ATBET9 [Arabidopsis lyrata subsp. lyrata]
gi|297317448|gb|EFH47870.1| ATBET9 [Arabidopsis lyrata subsp. lyrata]
Length = 690
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 110/331 (33%), Positives = 165/331 (49%), Gaps = 39/331 (11%)
Query: 371 IFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSP 430
+ K C ALL++LM H++GWVFN PVDV L + DYF +I+HPMDLGTVK +L Y P
Sbjct: 137 LMKQCEALLKRLMSHQYGWVFNTPVDVVKLNILDYFNVIKHPMDLGTVKNKLTSGTYSCP 196
Query: 431 KEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEMGF 490
EFA DVRLTF NAMTYNP G DV +MA+ L K FE +W +E + + +
Sbjct: 197 SEFAADVRLTFSNAMTYNPPGNDVFVMADTLRKFFEVRWKTLEKKLSG---------IKV 247
Query: 491 HTPTSRKAPPLPPPLDMRRILDRSESITHPMDSRLKPISTTPSSRTPAPKKPKAKDPHKR 550
HT + S S H + P+ +T A +P KR
Sbjct: 248 HT-------------------EPSNSDAHEEKHIVIPVPMAKKRKTSAVDCENVSEPVKR 288
Query: 551 DMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQ-HDDEIEVDIDSVDAETLWELD 609
MT +++ KL +L+SL +E ++ ++ NS+ DDEIE+DI+ + L++L
Sbjct: 289 VMTDEDRLKLGKDLESL-TEFPAQLINFLRDHNSNEGGIGDDEIEIDINDLSHHALFQLR 347
Query: 610 RFVTNYKKSLSKNKRK----AELANQARAVAQQNVQQQTPAPVVTEVRKEIRTDDRIGST 665
+ + + S+NK+ E+ +V ++ Q + + +I ++ S+
Sbjct: 348 DLLDEHLRE-SQNKKSSVEPCEIELLHGSVPGNSLMQHCDGSELDDEVIDIGKNEHPKSS 406
Query: 666 SSPVQVEKQV----DNGSRSSSSSSSSSDSG 692
SPV +EK + NG S + S SG
Sbjct: 407 ISPVTIEKDLVLGNSNGIFSFTCLYCHSVSG 437
>gi|357476123|ref|XP_003608347.1| Bromodomain-containing protein [Medicago truncatula]
gi|355509402|gb|AES90544.1| Bromodomain-containing protein [Medicago truncatula]
Length = 390
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 94/220 (42%), Positives = 132/220 (60%), Gaps = 30/220 (13%)
Query: 372 FKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPK 431
K+C +L+KLMK K GW+F++PVD L LHDYF II+HPMDLGTVK++L KN Y +P
Sbjct: 149 MKACGQILQKLMKTKIGWIFSSPVDPVALNLHDYFDIIKHPMDLGTVKSKLAKNAYSTPA 208
Query: 432 EFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEMGF- 490
EFA+DV+LTF NA+TYNPKG DV+ A QLL+ FE+ + I+ +++ + D E+
Sbjct: 209 EFADDVKLTFKNALTYNPKGHDVNTAAMQLLEKFEELYRPIQEKFDEK---SFDDELQAS 265
Query: 491 ---HTPTSRK---------APPLPPPLDMRRIL--DRSESITHPMDSRLKPISTTPSSRT 536
H R+ P+PPP+ R+ L + + + P S P++ +P RT
Sbjct: 266 SWNHVEPERERERVKKKDNPIPIPPPVAKRQELLPEPASTSNQPSTSNPPPLAQSP-VRT 324
Query: 537 PAP-----------KKPKAKDPHKRDMTYDEKQKLSTNLQ 565
P+P KPKA+DP+KR+M +EK KL LQ
Sbjct: 325 PSPTRALPVKPLKQPKPKARDPNKREMNVEEKHKLGLGLQ 364
>gi|413917010|gb|AFW56942.1| hypothetical protein ZEAMMB73_709520 [Zea mays]
Length = 487
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 101/265 (38%), Positives = 141/265 (53%), Gaps = 32/265 (12%)
Query: 373 KSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKE 432
+ C+ +L +L + K FN+PVDV+ L LHDY IIR PMDLGTVK L Y S +
Sbjct: 142 RRCADILTRLRRSKKSVWFNSPVDVEGLKLHDYRAIIRSPMDLGTVKQNLTAGRYPSHEA 201
Query: 433 FAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNR-----EMRIGADYE 487
FA DVRLTF+NA+ YNP VH A LL FE + S + + E + D
Sbjct: 202 FAGDVRLTFNNALRYNPPDHHVHRYAGDLLATFEGMYKEAVSWFEQQRQQLEPPMQLDLL 261
Query: 488 MGFHTPTSRKAPPLPPPLDMRRILDRSESITHPMDSRLKPISTTPSSRTPAPKKPKAKDP 547
P + P+ PL M R P KPKA+ P
Sbjct: 262 PPPPPPQLPVSVPVQAPLRMW------------------------GGRRP---KPKARQP 294
Query: 548 HKRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWE 607
+KR+M +EKQKL +++LP +K+ N++QI++KRN + +E+D D +D ETLWE
Sbjct: 295 NKREMDEEEKQKLRVEIENLPEDKVLNVLQIVQKRNRDPALSGEVVELDFDELDIETLWE 354
Query: 608 LDRFVTNYKKSLSKNKRKAELANQA 632
LDRFV N++K+L K++R + + A
Sbjct: 355 LDRFVVNWRKALKKSQRNSRMNGDA 379
>gi|356513665|ref|XP_003525531.1| PREDICTED: transcription factor GTE8-like [Glycine max]
Length = 739
Score = 166 bits (419), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 101/256 (39%), Positives = 148/256 (57%), Gaps = 34/256 (13%)
Query: 371 IFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSP 430
+ K C LL+++M H+ G VF+ PVD+ + DYFTII+HPMDLGTVK++L Y S
Sbjct: 170 LMKQCETLLKRVMSHQFGKVFDKPVDIVKWNIPDYFTIIKHPMDLGTVKSKLISCEYTSL 229
Query: 431 KEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEMGF 490
+FA DVRLTF NAM+YNP G DVH+MAE L K FE +W IE +I A ++
Sbjct: 230 MDFAADVRLTFSNAMSYNPPGNDVHVMAETLSKYFETRWKPIE-------KILAIDDV-- 280
Query: 491 HTPTSRKAPPLPPPLDMRRILDRSESITHPMDSRLKPISTTPSSRTPAPKKPKAKDPHKR 550
P+ P +++SE + P+ + TP+ P +P KR
Sbjct: 281 --PSEPSKP--------TTCIEKSEIVDPPVKKK----KITPNGTNVKP------EPIKR 320
Query: 551 DMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQ-HDDEIEVDIDSVDAETLWE-- 607
MT +EKQKLS L + E +NI+ +K+++ + Q +DDEIE+DID++ +TL++
Sbjct: 321 IMTGEEKQKLSMELDASVVELPENIIDFLKEQSYNASQINDDEIEIDIDALSDDTLFKLR 380
Query: 608 --LDRFVTNYKKSLSK 621
LD F+ +K+L+K
Sbjct: 381 KLLDDFMLEKQKTLAK 396
>gi|413917011|gb|AFW56943.1| hypothetical protein ZEAMMB73_709520 [Zea mays]
Length = 493
Score = 166 bits (419), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 101/265 (38%), Positives = 141/265 (53%), Gaps = 32/265 (12%)
Query: 373 KSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKE 432
+ C+ +L +L + K FN+PVDV+ L LHDY IIR PMDLGTVK L Y S +
Sbjct: 142 RRCADILTRLRRSKKSVWFNSPVDVEGLKLHDYRAIIRSPMDLGTVKQNLTAGRYPSHEA 201
Query: 433 FAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNR-----EMRIGADYE 487
FA DVRLTF+NA+ YNP VH A LL FE + S + + E + D
Sbjct: 202 FAGDVRLTFNNALRYNPPDHHVHRYAGDLLATFEGMYKEAVSWFEQQRQQLEPPMQLDLL 261
Query: 488 MGFHTPTSRKAPPLPPPLDMRRILDRSESITHPMDSRLKPISTTPSSRTPAPKKPKAKDP 547
P + P+ PL M R P KPKA+ P
Sbjct: 262 PPPPPPQLPVSVPVQAPLRMW------------------------GGRRP---KPKARQP 294
Query: 548 HKRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWE 607
+KR+M +EKQKL +++LP +K+ N++QI++KRN + +E+D D +D ETLWE
Sbjct: 295 NKREMDEEEKQKLRVEIENLPEDKVLNVLQIVQKRNRDPALSGEVVELDFDELDIETLWE 354
Query: 608 LDRFVTNYKKSLSKNKRKAELANQA 632
LDRFV N++K+L K++R + + A
Sbjct: 355 LDRFVVNWRKALKKSQRNSRMNGDA 379
>gi|115447147|ref|NP_001047353.1| Os02g0601800 [Oryza sativa Japonica Group]
gi|47497295|dbj|BAD19337.1| putative global transcription factor group E [Oryza sativa Japonica
Group]
gi|47848299|dbj|BAD22163.1| putative global transcription factor group E [Oryza sativa Japonica
Group]
gi|113536884|dbj|BAF09267.1| Os02g0601800 [Oryza sativa Japonica Group]
gi|222623188|gb|EEE57320.1| hypothetical protein OsJ_07416 [Oryza sativa Japonica Group]
Length = 714
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 112/319 (35%), Positives = 155/319 (48%), Gaps = 40/319 (12%)
Query: 367 TGSKIFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNW 426
T IFK C A+L+KLM K +F++PVD L + DYF II+ PMDLGT++ +L+
Sbjct: 163 TEDAIFKQCDAILKKLMTQKCSNIFDSPVDAVKLNIPDYFQIIKKPMDLGTIRNKLDSGS 222
Query: 427 YKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADY 486
Y SP EFA DVRLTF NAMTYNP+G VH A QL K+FE +W IE + + A
Sbjct: 223 YTSPSEFAADVRLTFSNAMTYNPRGHVVHDYAIQLNKMFESRWRTIEKKLA-SIATEAHV 281
Query: 487 EMGFHTPTSRKAPPLPPPLDMRRILDRSESITHPMDSRLKPISTTPSSRTPAPKKPKAKD 546
E+ RK PP +D SE T + + T S R KPK
Sbjct: 282 EVDRADSKRRKTPP----------VDCSEVST-------ECVRPTESVRPTESVKPK--- 321
Query: 547 PHKRDMTYDEKQKLSTNLQSL------PSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSV 600
MT++EK+ L SL PS +D + Q I L D EIE+DI +V
Sbjct: 322 -----MTFEEKESFGNCLASLSEDPEVPSHIIDLLQQCIDNNTDQL--GDGEIEIDIHAV 374
Query: 601 DAETLWELDRFVTNY--KKSLSKNKRKAELANQARAVAQQNVQQQTPAPVVTEVRKEIRT 658
+ L+EL + V Y ++ S+ + N+A V+ + P V +++
Sbjct: 375 SDDLLFELKKHVDKYLQEREQSQQAKSEPSENEAANVSGLSHSSTNPCKGGDPVEEDV-- 432
Query: 659 DDRIGSTSSPVQVEKQVDN 677
I +SP+ +EK N
Sbjct: 433 --DICGNASPILIEKDAHN 449
>gi|13699186|dbj|BAB41205.1| kinase-like protein [Oryza sativa (japonica cultivar-group)]
Length = 714
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 112/319 (35%), Positives = 155/319 (48%), Gaps = 40/319 (12%)
Query: 367 TGSKIFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNW 426
T IFK C A+L+KLM K +F++PVD L + DYF II+ PMDLGT++ +L+
Sbjct: 163 TEDAIFKQCDAILKKLMTQKCSNIFDSPVDAVKLNIPDYFQIIKKPMDLGTIRNKLDSGS 222
Query: 427 YKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADY 486
Y SP EFA DVRLTF NAMTYNP+G VH A QL K+FE +W IE + + A
Sbjct: 223 YTSPSEFAADVRLTFSNAMTYNPRGHVVHDYAIQLNKMFESRWRTIEKKLA-SIATEAHV 281
Query: 487 EMGFHTPTSRKAPPLPPPLDMRRILDRSESITHPMDSRLKPISTTPSSRTPAPKKPKAKD 546
E+ RK PP +D SE T + + T S R KPK
Sbjct: 282 EVDRADSKRRKTPP----------VDCSEVST-------ECVRPTESVRPTESVKPK--- 321
Query: 547 PHKRDMTYDEKQKLSTNLQSL------PSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSV 600
MT++EK+ L SL PS +D + Q I L D EIE+DI +V
Sbjct: 322 -----MTFEEKESFGNCLASLSEDPEVPSHIIDLLQQCIDNNTDQL--GDGEIEIDIHAV 374
Query: 601 DAETLWELDRFVTNY--KKSLSKNKRKAELANQARAVAQQNVQQQTPAPVVTEVRKEIRT 658
+ L+EL + V Y ++ S+ + N+A V+ + P V +++
Sbjct: 375 SDDLLFELKKHVDKYLQEREQSQQAKSEPSENEAANVSGLSHSSTNPCKGGDPVEEDV-- 432
Query: 659 DDRIGSTSSPVQVEKQVDN 677
I +SP+ +EK N
Sbjct: 433 --DICGNASPILIEKDAHN 449
>gi|218191119|gb|EEC73546.1| hypothetical protein OsI_07959 [Oryza sativa Indica Group]
Length = 714
Score = 157 bits (398), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 112/319 (35%), Positives = 155/319 (48%), Gaps = 40/319 (12%)
Query: 367 TGSKIFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNW 426
T IFK C A+L+KLM K +F++PVD L + DYF II+ PMDLGT++ +L+
Sbjct: 163 TEDAIFKQCDAILKKLMTQKCSNIFDSPVDAVKLNIPDYFQIIKKPMDLGTIRNKLDSGS 222
Query: 427 YKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADY 486
Y SP EFA DVRLTF NAMTYNP+G VH A QL K+FE +W IE + + A
Sbjct: 223 YTSPSEFAADVRLTFSNAMTYNPRGHVVHDYAIQLNKMFESRWRTIEKKLA-SIATEAHV 281
Query: 487 EMGFHTPTSRKAPPLPPPLDMRRILDRSESITHPMDSRLKPISTTPSSRTPAPKKPKAKD 546
E+ RK PP +D SE T + + T S R KPK
Sbjct: 282 EVDRADSKRRKTPP----------VDCSEVST-------ECVRPTESVRPTESVKPK--- 321
Query: 547 PHKRDMTYDEKQKLSTNLQSL------PSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSV 600
MT++EK+ L SL PS +D + Q I L D EIE+DI +V
Sbjct: 322 -----MTFEEKESFGNCLASLSEDPEVPSHIIDLLQQCIDNNTDQL--GDGEIEIDIHAV 374
Query: 601 DAETLWELDRFVTNY--KKSLSKNKRKAELANQARAVAQQNVQQQTPAPVVTEVRKEIRT 658
+ L+EL + V Y ++ S+ + N+A V+ + P V +++
Sbjct: 375 SDDLLFELKKHVDKYLQEREQSQQAKSEPSENEAANVSGLSHSSTNPCKGGDPVEEDV-- 432
Query: 659 DDRIGSTSSPVQVEKQVDN 677
I +SP+ +EK N
Sbjct: 433 --DICGNASPILIEKDAHN 449
>gi|47497296|dbj|BAD19338.1| putative global transcription factor group E [Oryza sativa Japonica
Group]
gi|47848300|dbj|BAD22164.1| putative global transcription factor group E [Oryza sativa Japonica
Group]
gi|215768414|dbj|BAH00643.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 480
Score = 156 bits (394), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 120/360 (33%), Positives = 166/360 (46%), Gaps = 56/360 (15%)
Query: 342 PAESNKKSKLNGKKQAGNELAHG----------------FGTGSKIFKSCSALLEKLMKH 385
PA S+ + K Q GN + G T IFK C A+L+KLM
Sbjct: 122 PALSSSAAPRGKKGQRGNHVVRGAKGRFLPTKPRPEASTVLTEDAIFKQCDAILKKLMTQ 181
Query: 386 KHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAM 445
K +F++PVD L + DYF II+ PMDLGT++ +L+ Y SP EFA DVRLTF NAM
Sbjct: 182 KCSNIFDSPVDAVKLNIPDYFQIIKKPMDLGTIRNKLDSGSYTSPSEFAADVRLTFSNAM 241
Query: 446 TYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEMGFHTPTSRKAPPLPPPL 505
TYNP+G VH A QL K+FE +W IE + + A E+ RK PP
Sbjct: 242 TYNPRGHVVHDYAIQLNKMFESRWRTIEKKLA-SIATEAHVEVDRADSKRRKTPP----- 295
Query: 506 DMRRILDRSESITHPMDSRLKPISTTPSSRTPAPKKPKAKDPHKRDMTYDEKQKLSTNLQ 565
+D SE T + + T S R KPK MT++EK+ L
Sbjct: 296 -----VDCSEVST-------ECVRPTESVRPTESVKPK--------MTFEEKESFGNCLA 335
Query: 566 SL------PSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWELDRFVTNY--KK 617
SL PS +D + Q I L D EIE+DI +V + L+EL + V Y ++
Sbjct: 336 SLSEDPEVPSHIIDLLQQCIDNNTDQL--GDGEIEIDIHAVSDDLLFELKKHVDKYLQER 393
Query: 618 SLSKNKRKAELANQARAVAQQNVQQQTPAPVVTEVRKEIRTDDRIGSTSSPVQVEKQVDN 677
S+ + N+A V+ + P V +++ I +SP+ +EK N
Sbjct: 394 EQSQQAKSEPSENEAANVSGLSHSSTNPCKGGDPVEEDV----DICGNASPILIEKDAHN 449
>gi|356560519|ref|XP_003548539.1| PREDICTED: transcription factor GTE8-like [Glycine max]
Length = 744
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 104/279 (37%), Positives = 151/279 (54%), Gaps = 32/279 (11%)
Query: 352 NGKKQAGNELAHGFGTGSKIFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRH 411
+GK ++ + A + + K C LL++LM H++ WVF PVDV L L DYFTII+
Sbjct: 161 SGKFESAVQSASPSTANAMLMKDCELLLKRLMSHQYAWVFKTPVDVVKLNLPDYFTIIKR 220
Query: 412 PMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVV 471
PMDLGTVK++L Y P EFA+DV+LTF NAM YNP G DVH+MA+ L K FE +W
Sbjct: 221 PMDLGTVKSKLAAGEYAGPLEFADDVKLTFSNAMNYNPSGNDVHLMADTLNKYFELRWKA 280
Query: 472 IESEYNRE--MRIGADYEMGFHTPTSRKAPPLPPPLDMRRILDRSESITHPMDSRLKPIS 529
IE + + + I A + T R+APP S+ + I+
Sbjct: 281 IEKKLPKSDVLPIPAKPDNSEGVKTKRQAPP----------------------SKKRKIA 318
Query: 530 TTPSSRTPAPKKPKAKDPHKRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQH 589
+ P +PK P K+ M+ EK L L+SL E +I+ +K+ +S+ +
Sbjct: 319 SLPP-------QPKVMPPTKKVMSDQEKHDLGRELESLLGEMPMHIIDFLKEHSSNGREC 371
Query: 590 -DDEIEVDIDSVDAETLWELDRFVTNYKKSLSKNKRKAE 627
DDEIE+DID + +TL+ L + + ++ + KNK K E
Sbjct: 372 GDDEIEIDIDDLSDDTLFTLRKLLDDFLQEKQKNKAKVE 410
>gi|255536997|ref|XP_002509565.1| bromodomain-containing protein, putative [Ricinus communis]
gi|223549464|gb|EEF50952.1| bromodomain-containing protein, putative [Ricinus communis]
Length = 718
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 87/220 (39%), Positives = 113/220 (51%), Gaps = 29/220 (13%)
Query: 365 FGTGSKIFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNK 424
T + K C LL +LM H++GWVF PVDV L + DY+TII+HPMDLGT+K+ +
Sbjct: 99 LATNMMVMKQCETLLSRLMSHQYGWVFKEPVDVVKLNIPDYYTIIKHPMDLGTIKSNICS 158
Query: 425 NWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGA 484
Y SP EF DVRLTF NAM YNPKG DVHIMA+ L K FE +W IE + +
Sbjct: 159 GLYSSPLEFLADVRLTFRNAMEYNPKGSDVHIMADTLSKFFEVRWKAIEKKLPK------ 212
Query: 485 DYEMGFHTPTSRKAPPLPPPLDMRRILDRSESITHPMDSRLKPISTTPSSRTPAPKKPKA 544
+ H S+ P R L +E IS + + +
Sbjct: 213 ---IDTHGLPSKSGP--------REDLQITE------------ISPIKKRKISSYQHEIV 249
Query: 545 KDPHKRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNS 584
P +R MT DEKQKL L+SL E +I+ +K +S
Sbjct: 250 AVPVRRVMTDDEKQKLGKELESLLGEMPIHIIDFLKDHSS 289
>gi|242065686|ref|XP_002454132.1| hypothetical protein SORBIDRAFT_04g025160 [Sorghum bicolor]
gi|241933963|gb|EES07108.1| hypothetical protein SORBIDRAFT_04g025160 [Sorghum bicolor]
Length = 711
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 92/247 (37%), Positives = 131/247 (53%), Gaps = 34/247 (13%)
Query: 371 IFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSP 430
+FK C A+L+KLM K+ +FN PVDV L + DYF I++ PMDLGTV+ +L Y SP
Sbjct: 171 VFKQCEAILKKLMTQKYSHIFNVPVDVDKLQIPDYFDIVKTPMDLGTVQKKLESGSYTSP 230
Query: 431 KEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEMGF 490
+FA DVRLTF+NAM YNPKG VH MA QL K+FE +W IE + E+
Sbjct: 231 SDFAADVRLTFNNAMAYNPKGHAVHDMAIQLNKMFESRWRPIEKKLA-SAATEKHVEVDR 289
Query: 491 HTPTSRKAPPLPPPLDMRRILDRSESITHPMDSRLKPISTTPSSRTPAPKKPKAKDPHKR 550
RK PP +DRS+ +T R P+KPK
Sbjct: 290 ADSKRRKTPP----------VDRSD-------------VSTEGVRQTEPEKPK------- 319
Query: 551 DMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKR--NSSLFQHDDEIEVDIDSVDAETLWEL 608
MT +E++ +L S+ E +I +++++ +++ D EIE+DI +V + L+EL
Sbjct: 320 -MTAEEREAFGNSLASISDELPPHIFELLQQCIDSNTDMPGDGEIEIDIQAVSDDMLFEL 378
Query: 609 DRFVTNY 615
+ V Y
Sbjct: 379 KKHVDKY 385
>gi|218195611|gb|EEC78038.1| hypothetical protein OsI_17470 [Oryza sativa Indica Group]
Length = 330
Score = 152 bits (384), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 94/256 (36%), Positives = 128/256 (50%), Gaps = 45/256 (17%)
Query: 373 KSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKE 432
K C +L KL K K FNAPV+V LGL DY +I+ PMDLGTV+ L Y S +
Sbjct: 3 KRCDQILAKLRKDKRSIWFNAPVEVDRLGLQDYHAVIKCPMDLGTVRANLAAGRYPSHDD 62
Query: 433 FAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEMGFHT 492
FA D+RLTF NA+ YNP G +VH A LL FE + S + +E++I
Sbjct: 63 FAADIRLTFSNALRYNPAGHEVHTFAGDLLASFEKMYKASVSWFEQELKILEPPMPVPPP 122
Query: 493 PTSRKAPPLPPPLDMRRILDRSESITHPMDSRLKPISTTPSSRTPAPKKPKAKDPHKRDM 552
P +++KP + R K KA++P+KR+M
Sbjct: 123 ELPPAKAP----------------------AQVKPRAGNVKMR-----KTKAREPNKREM 155
Query: 553 TYDEKQKLSTNLQSLPSEKLDNIVQ--IIKKRNSSLFQHDDEIEVDIDSVDAETLWELDR 610
T +EK N V+ I++KRN + EIE+DID +D ET WELDR
Sbjct: 156 TLEEK----------------NFVEGWIVRKRNGNPELVGGEIELDIDEMDVETQWELDR 199
Query: 611 FVTNYKKSLSKNKRKA 626
FV +KK+L+K++R A
Sbjct: 200 FVNKFKKALNKSRRAA 215
>gi|168002796|ref|XP_001754099.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694653|gb|EDQ81000.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 517
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/242 (35%), Positives = 135/242 (55%), Gaps = 22/242 (9%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNK---NWYKSPKEF 433
+ ++ +HK W F PVDV+ LGLHDY +I PMDLGT+K +++ + Y+ +E
Sbjct: 230 GIWRQISQHKWAWPFLKPVDVEGLGLHDYNDVIEKPMDLGTIKNKMDAKDTSGYQHVQEV 289
Query: 434 AEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKW-VVIESEYNRE--MRIGADYEMGF 490
+D+RL F NAMTYNP+G DVH+M++ L FE+KW +IE + + E D E+
Sbjct: 290 CDDMRLVFSNAMTYNPEGSDVHVMSKTLSDKFEEKWKALIEPKLHFEESKTQQEDNEVQL 349
Query: 491 HTPTSRKAPPLPPPLDMRRILDRSESITHPMDSRLKPISTTPSSRTPAPKKPKAKDPHKR 550
+ + +D +++ ++ +D +L+ + R AP +A
Sbjct: 350 KEAGMQ----VVEEIDTKKLTEQYLLQLEELDKQLEDLK-----RQAAPTCSRA------ 394
Query: 551 DMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWELDR 610
M+ +EK+ L NL LP E L +++QII +RN S + DE+EVDID+ D TLW L R
Sbjct: 395 -MSIEEKRHLGQNLGKLPPENLSHVIQIIAQRNPSFNINSDEVEVDIDAQDPATLWRLQR 453
Query: 611 FV 612
+V
Sbjct: 454 YV 455
>gi|167999165|ref|XP_001752288.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696683|gb|EDQ83021.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 260
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 85/239 (35%), Positives = 130/239 (54%), Gaps = 26/239 (10%)
Query: 381 KLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN---WYKSPKEFAEDV 437
++ +HK W F PVDVK LGLHDY+ +I PMDLGT+K +L+ Y+ +E +DV
Sbjct: 1 QISQHKWAWPFMKPVDVKGLGLHDYYDVIEKPMDLGTIKNKLDVKDGLGYQHVQEVCDDV 60
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKW-VVIESEYNREMRIGADYEMGFHTPTSR 496
RL F NAMTYNP+G DV++M++ L FE+KW +IE + E++ D +
Sbjct: 61 RLVFSNAMTYNPEGSDVYVMSKTLSDKFEEKWKTLIEPKLQEELKRSHD---DSEVQANE 117
Query: 497 KAPPLPPPLDMRRILDRSE---SITHPMDSRLKPISTTPSSRTPAPKKPKAKDPHKRDMT 553
P+ +D +++++ S+ D L K + R M+
Sbjct: 118 GGVPVVEEIDTEKVIEQYALQVSLDCSQDCALS----------------KCRKIMTRAMS 161
Query: 554 YDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWELDRFV 612
+EK+ L +L LP + L +++QII ++N S + DE+EVDID+ D TLW L R+V
Sbjct: 162 VEEKRHLGQSLGRLPPDNLSHVIQIIAQKNPSFNINSDEVEVDIDAQDPATLWRLQRYV 220
>gi|306922427|ref|NP_001105214.2| LOC542112 [Zea mays]
Length = 696
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 91/247 (36%), Positives = 128/247 (51%), Gaps = 36/247 (14%)
Query: 372 FKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPK 431
FK C A+L+KLM K+ +FN PVD+ L + DYF I++ PMDLGTVK +L Y SP
Sbjct: 169 FKQCEAILKKLMTQKYSHIFNVPVDIVKLQIPDYFDIVKTPMDLGTVKKKLESGSYTSPS 228
Query: 432 EFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEMGFH 491
+FA DVRLTF+NAM YNP+G VH MA QL K+FE +W IE + E+
Sbjct: 229 DFAADVRLTFNNAMAYNPRGHAVHDMAIQLNKMFESRWRPIEKKLA-SAATEKHVEVDRA 287
Query: 492 TPTSRKAPPLPPPLDMRRILDRSESITHPMDSRLKPISTTPSSRTPAPKKPKAKDPHKRD 551
RK PP +DRS+ + +R P+ PK
Sbjct: 288 DSKRRKTPP----------VDRSD-------------VSMECARQTEPETPK-------- 316
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKK---RNSSLFQHDDEIEVDIDSVDAETLWEL 608
MT +E++ L S+ E +I +++++ N+ L D EIE+DI +V + L+EL
Sbjct: 317 MTAEEREAFGNCLASISDELPPHIFELLQQCIDSNADL-SGDGEIEIDIHAVSDDLLFEL 375
Query: 609 DRFVTNY 615
+ V Y
Sbjct: 376 KKHVDKY 382
>gi|29569106|gb|AAO84020.1| global transcription factor group E [Zea mays]
Length = 696
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 91/247 (36%), Positives = 128/247 (51%), Gaps = 36/247 (14%)
Query: 372 FKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPK 431
FK C A+L+KLM K+ +FN PVD+ L + DYF I++ PMDLGTVK +L Y SP
Sbjct: 169 FKQCEAILKKLMTQKYSHIFNVPVDIVKLQIPDYFDIVKTPMDLGTVKKKLESGSYTSPS 228
Query: 432 EFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEMGFH 491
+FA DVRLTF+NAM YNP+G VH MA QL K+FE +W IE + E+
Sbjct: 229 DFAADVRLTFNNAMAYNPRGHAVHDMAIQLNKMFESRWRPIEKKLA-SAATEKHVEVDRA 287
Query: 492 TPTSRKAPPLPPPLDMRRILDRSESITHPMDSRLKPISTTPSSRTPAPKKPKAKDPHKRD 551
RK PP +DRS+ + +R P+ PK
Sbjct: 288 DSKRRKTPP----------VDRSD-------------VSMECARQTEPETPK-------- 316
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKK---RNSSLFQHDDEIEVDIDSVDAETLWEL 608
MT +E++ L S+ E +I +++++ N+ L D EIE+DI +V + L+EL
Sbjct: 317 MTAEEREAFGNCLASISDELPPHIFELLQQCIDSNADL-SGDGEIEIDIHAVSDDLLFEL 375
Query: 609 DRFVTNY 615
+ V Y
Sbjct: 376 KKHVDKY 382
>gi|413937647|gb|AFW72198.1| global transcription factor group E [Zea mays]
Length = 696
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 91/247 (36%), Positives = 128/247 (51%), Gaps = 36/247 (14%)
Query: 372 FKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPK 431
FK C A+L+KLM K+ +FN PVD+ L + DYF I++ PMDLGTVK +L Y SP
Sbjct: 169 FKQCEAILKKLMTQKYSHIFNVPVDIVKLQIPDYFDIVKTPMDLGTVKKKLESGSYTSPS 228
Query: 432 EFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEMGFH 491
+FA DVRLTF+NAM YNP+G VH MA QL K+FE +W IE + E+
Sbjct: 229 DFAADVRLTFNNAMAYNPRGHAVHDMAIQLNKMFESRWRPIEKKLA-SAATEKHVEVDRA 287
Query: 492 TPTSRKAPPLPPPLDMRRILDRSESITHPMDSRLKPISTTPSSRTPAPKKPKAKDPHKRD 551
RK PP +DRS+ + +R P+ PK
Sbjct: 288 DSKRRKTPP----------VDRSD-------------VSMECARQTEPETPK-------- 316
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKK---RNSSLFQHDDEIEVDIDSVDAETLWEL 608
MT +E++ L S+ E +I +++++ N+ L D EIE+DI +V + L+EL
Sbjct: 317 MTAEEREAFGNCLASISDELPPHIFELLQQCIDSNADL-SGDGEIEIDIHAVSDDLLFEL 375
Query: 609 DRFVTNY 615
+ V Y
Sbjct: 376 KKHVDKY 382
>gi|356574042|ref|XP_003555161.1| PREDICTED: transcription factor GTE8-like [Glycine max]
Length = 741
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 104/276 (37%), Positives = 149/276 (53%), Gaps = 28/276 (10%)
Query: 353 GKKQAGNELAHGFGTGSKIFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHP 412
GK ++ + A + + K C LL++LM H++ WVFN PVDV L L DYFTII+ P
Sbjct: 159 GKFESAVQSASPSTANAMLMKDCELLLKRLMNHQYAWVFNTPVDVVKLNLPDYFTIIKRP 218
Query: 413 MDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVI 472
MDLGTVK +L Y P EFA+DV+LTF NAM YNP G DVH+MA+ L K FE +W I
Sbjct: 219 MDLGTVKNKLASGEYAGPLEFADDVKLTFSNAMDYNPSGNDVHLMADTLNKYFELRWKAI 278
Query: 473 ESEYNREMRIGADYEMGFHTPTSRKAPPLPPPLDMRRILDRSESITHPMDSRLKPISTTP 532
E + + +D+ LP P + D SE + R P+S
Sbjct: 279 EKKLQK-----SDF--------------LPLPANP----DNSEGVK---TKRQAPLSKKR 312
Query: 533 SSRTPAPKKPKAKDPHKRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQH-DD 591
+ P +P+ P K+ M+ EK L L+S E +I+ +K+ +S+ + DD
Sbjct: 313 KIAS-LPPQPEVMPPTKKVMSDQEKHDLGRELESQLGEMPMHIIDFLKEHSSNGRECGDD 371
Query: 592 EIEVDIDSVDAETLWELDRFVTNYKKSLSKNKRKAE 627
EIE+DID + +TL+ L + + ++ + KNK K E
Sbjct: 372 EIEIDIDDLSDDTLFTLRKLLDDFLQKKQKNKAKVE 407
>gi|413937648|gb|AFW72199.1| hypothetical protein ZEAMMB73_903470 [Zea mays]
Length = 728
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 91/247 (36%), Positives = 128/247 (51%), Gaps = 36/247 (14%)
Query: 372 FKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPK 431
FK C A+L+KLM K+ +FN PVD+ L + DYF I++ PMDLGTVK +L Y SP
Sbjct: 185 FKQCEAILKKLMTQKYSHIFNVPVDIVKLQIPDYFDIVKTPMDLGTVKKKLESGSYTSPS 244
Query: 432 EFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEMGFH 491
+FA DVRLTF+NAM YNP+G VH MA QL K+FE +W IE + E+
Sbjct: 245 DFAADVRLTFNNAMAYNPRGHAVHDMAIQLNKMFESRWRPIEKKLA-SAATEKHVEVDRA 303
Query: 492 TPTSRKAPPLPPPLDMRRILDRSESITHPMDSRLKPISTTPSSRTPAPKKPKAKDPHKRD 551
RK PP +DRS+ + +R P+ PK
Sbjct: 304 DSKRRKTPP----------VDRSD-------------VSMECARQTEPETPK-------- 332
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKK---RNSSLFQHDDEIEVDIDSVDAETLWEL 608
MT +E++ L S+ E +I +++++ N+ L D EIE+DI +V + L+EL
Sbjct: 333 MTAEEREAFGNCLASISDELPPHIFELLQQCIDSNADL-SGDGEIEIDIHAVSDDLLFEL 391
Query: 609 DRFVTNY 615
+ V Y
Sbjct: 392 KKHVDKY 398
>gi|413937645|gb|AFW72196.1| hypothetical protein ZEAMMB73_903470 [Zea mays]
Length = 488
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 91/247 (36%), Positives = 128/247 (51%), Gaps = 36/247 (14%)
Query: 372 FKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPK 431
FK C A+L+KLM K+ +FN PVD+ L + DYF I++ PMDLGTVK +L Y SP
Sbjct: 169 FKQCEAILKKLMTQKYSHIFNVPVDIVKLQIPDYFDIVKTPMDLGTVKKKLESGSYTSPS 228
Query: 432 EFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEMGFH 491
+FA DVRLTF+NAM YNP+G VH MA QL K+FE +W IE + E+
Sbjct: 229 DFAADVRLTFNNAMAYNPRGHAVHDMAIQLNKMFESRWRPIEKKLA-SAATEKHVEVDRA 287
Query: 492 TPTSRKAPPLPPPLDMRRILDRSESITHPMDSRLKPISTTPSSRTPAPKKPKAKDPHKRD 551
RK PP +DRS+ + +R P+ PK
Sbjct: 288 DSKRRKTPP----------VDRSD-------------VSMECARQTEPETPK-------- 316
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKK---RNSSLFQHDDEIEVDIDSVDAETLWEL 608
MT +E++ L S+ E +I +++++ N+ L D EIE+DI +V + L+EL
Sbjct: 317 MTAEEREAFGNCLASISDELPPHIFELLQQCIDSNADL-SGDGEIEIDIHAVSDDLLFEL 375
Query: 609 DRFVTNY 615
+ V Y
Sbjct: 376 KKHVDKY 382
>gi|219888341|gb|ACL54545.1| unknown [Zea mays]
gi|413937646|gb|AFW72197.1| hypothetical protein ZEAMMB73_903470 [Zea mays]
Length = 538
Score = 149 bits (375), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 91/247 (36%), Positives = 128/247 (51%), Gaps = 36/247 (14%)
Query: 372 FKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPK 431
FK C A+L+KLM K+ +FN PVD+ L + DYF I++ PMDLGTVK +L Y SP
Sbjct: 169 FKQCEAILKKLMTQKYSHIFNVPVDIVKLQIPDYFDIVKTPMDLGTVKKKLESGSYTSPS 228
Query: 432 EFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEMGFH 491
+FA DVRLTF+NAM YNP+G VH MA QL K+FE +W IE + E+
Sbjct: 229 DFAADVRLTFNNAMAYNPRGHAVHDMAIQLNKMFESRWRPIEKKLA-SAATEKHVEVDRA 287
Query: 492 TPTSRKAPPLPPPLDMRRILDRSESITHPMDSRLKPISTTPSSRTPAPKKPKAKDPHKRD 551
RK PP +DRS+ + +R P+ PK
Sbjct: 288 DSKRRKTPP----------VDRSD-------------VSMECARQTEPETPK-------- 316
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKK---RNSSLFQHDDEIEVDIDSVDAETLWEL 608
MT +E++ L S+ E +I +++++ N+ L D EIE+DI +V + L+EL
Sbjct: 317 MTAEEREAFGNCLASISDELPPHIFELLQQCIDSNADL-SGDGEIEIDIHAVSDDLLFEL 375
Query: 609 DRFVTNY 615
+ V Y
Sbjct: 376 KKHVDKY 382
>gi|240256475|ref|NP_201137.5| nuclear protein X1 [Arabidopsis thaliana]
gi|327488242|sp|Q9FGW9.2|GTE10_ARATH RecName: Full=Transcription factor GTE10; AltName:
Full=Bromodomain-containing protein GTE10; AltName:
Full=Nuclear protein X1; AltName: Full=Protein GLOBAL
TRANSCRIPTION FACTOR GROUP E10
gi|332010349|gb|AED97732.1| nuclear protein X1 [Arabidopsis thaliana]
Length = 1061
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 96/297 (32%), Positives = 142/297 (47%), Gaps = 46/297 (15%)
Query: 339 KFPPAESNKKSKLNGKKQAGNELAHGFGTGSKIFKSCSALLEKLMKHKHGWVFNAPVDVK 398
K PP S+K+ G + ++ T + + K C LL +L HK GW F PVD
Sbjct: 132 KRPPVRSDKQRNKKGPSRLNVPTSY---TVASVMKECETLLNRLWSHKSGWPFRTPVDPV 188
Query: 399 NLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMA 458
L + DYF +I+HPMDLGT+++RL K Y SP +FA DVRLTF N++ YNP G H MA
Sbjct: 189 MLNIPDYFNVIKHPMDLGTIRSRLCKGEYSSPLDFAADVRLTFSNSIAYNPPGNQFHTMA 248
Query: 459 EQLLKIFEDKWVVIESEYNREMRIGADYEMGFHTPTSRKAPPLPPPLDMRRILDRSESIT 518
+ + K FE W IE +K P PP+
Sbjct: 249 QGISKYFESGWKSIE----------------------KKIPMSKPPV------------- 273
Query: 519 HPMDSRLKPISTTPSSRTPAPKKPKAK-------DPHKRDMTYDEKQKLSTNLQSLPSEK 571
P+ S S P P KK A +P K MT EK+KL +L +L +
Sbjct: 274 IPLTSSASLESEIPFEVAPMRKKEAAMNDNKLRVEPAKLVMTDGEKKKLGQDLMALEEDF 333
Query: 572 LDNIVQIIKKRNSSLFQH-DDEIEVDIDSVDAETLWELDRFVTNYKKSLSKNKRKAE 627
I ++++++ S Q + EIE+DI+++ E L+ + + + +Y + K+ K+E
Sbjct: 334 PQKIADLLREQSGSDGQSGEGEIEIDIEALSDEILFMVRKLLDDYLREKKKSMEKSE 390
>gi|6016737|gb|AAF01563.1|AC009325_33 hypothetical protein [Arabidopsis thaliana]
gi|6091741|gb|AAF03453.1|AC010797_29 hypothetical protein [Arabidopsis thaliana]
Length = 601
Score = 147 bits (372), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/265 (35%), Positives = 140/265 (52%), Gaps = 36/265 (13%)
Query: 372 FKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPK 431
K C +LL++LM +H W+FN PVDV L + DYFTII+HPMDLGTVK++L Y SP
Sbjct: 130 MKQCESLLKRLMSQQHCWLFNTPVDVVKLNIPDYFTIIKHPMDLGTVKSKLTSGTYSSPS 189
Query: 432 EFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEMGFH 491
EF+ DVRLTF NAMTYNP +V+ A+ L K FE +W IE + + G E
Sbjct: 190 EFSADVRLTFRNAMTYNPSDNNVYRFADTLSKFFEVRWKTIEKKSS-----GTKSEPSNL 244
Query: 492 TPTSRKAPPLPPPLDMRRILDRSESITHPMDSRLKPISTTPSSRTPAPKKPKAKDPHKRD 551
+ K +P P+ +R ++ A K+ +P KR
Sbjct: 245 ATLAHKDIAIPEPVAKKRKMN-------------------------AVKRNSLLEPAKRV 279
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQH-DDEIEVDIDSVDAETLWEL-- 608
MT +++ KL +L SL +E I+ ++ +S + DDEIE+DI+ + + L++L
Sbjct: 280 MTDEDRVKLGRDLGSL-TEFPVQIINFLRDHSSKEERSGDDEIEIDINDLSHDALFQLRD 338
Query: 609 --DRFVTNYKKSLSKNKRKAELANQ 631
D F+ +K S + +EL ++
Sbjct: 339 LFDEFLRENQKKDSNGEPWSELEDE 363
>gi|42568797|ref|NP_201366.3| global transcription factor group E7 [Arabidopsis thaliana]
gi|75146221|sp|Q7Y214.1|GTE7_ARATH RecName: Full=Transcription factor GTE7; AltName:
Full=Bromodomain-containing protein GTE7; AltName:
Full=Protein GLOBAL TRANSCRIPTION FACTOR GROUP E7
gi|30793995|gb|AAP40447.1| unknown protein [Arabidopsis thaliana]
gi|110742049|dbj|BAE98957.1| hypothetical protein [Arabidopsis thaliana]
gi|133778882|gb|ABO38781.1| At5g65630 [Arabidopsis thaliana]
gi|332010696|gb|AED98079.1| global transcription factor group E7 [Arabidopsis thaliana]
Length = 590
Score = 147 bits (372), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 93/254 (36%), Positives = 128/254 (50%), Gaps = 59/254 (23%)
Query: 213 ISLGSSTKREMREIRKKLEIELDTVRSLVKRIEAKEVQISGGVSNSGVLPVSDVVDNGIK 272
+L T ++RE++K+ EL +R L +RIE+ + G + +P
Sbjct: 70 FNLAGYTSSQLRELKKRFTSELKQIRILRERIESGTFETQQGYT----IP---------- 115
Query: 273 RGHSEVASVGVPVTRVGITRPSRPLNQLSISTVENSLGLSENVEKEKRTPKANQFYRNSE 332
VP R S PLN + + +N LG PK + +N
Sbjct: 116 ---------EVPAVR------SAPLN--NFTGEKNDLG-----------PKKKKQKKNVS 147
Query: 333 FLLAKDKFPPAESNKKSKLNGKKQAGNELAHGFGTGSKIFKSCSALLEKLMKHKHGWVFN 392
L ++F P++ + L G + +CS +L KLMKHK WVFN
Sbjct: 148 GLKRSNQFGPSDPESEKLLAG-----------------MLNTCSQILVKLMKHKWAWVFN 190
Query: 393 APVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQ 452
PVDV LGLHDY +++ PMDLGTVK L+K +Y SP +FA DVRLTF NAMTYNPKGQ
Sbjct: 191 TPVDVVGLGLHDYHQVVKKPMDLGTVKLNLDKGFYVSPIDFATDVRLTFDNAMTYNPKGQ 250
Query: 453 DVHIMAEQLLKIFE 466
DV+ MA++LL F+
Sbjct: 251 DVYFMADKLLDHFD 264
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 58/90 (64%), Positives = 69/90 (76%)
Query: 541 KPKAKDPHKRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSV 600
KPKAKDP+KR MT +EK KL NLQ LP EKL ++QI++KRN L Q DEIE+DI++V
Sbjct: 393 KPKAKDPNKRLMTMEEKSKLGMNLQDLPPEKLGQLLQILRKRNGHLAQDGDEIELDIEAV 452
Query: 601 DAETLWELDRFVTNYKKSLSKNKRKAELAN 630
D ETLWELDRFVTNYKK SK KR+ + N
Sbjct: 453 DNETLWELDRFVTNYKKMASKIKRQGFIRN 482
>gi|428176256|gb|EKX45141.1| hypothetical protein GUITHDRAFT_108789 [Guillardia theta CCMP2712]
Length = 220
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 88/249 (35%), Positives = 129/249 (51%), Gaps = 50/249 (20%)
Query: 373 KSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKE 432
K C +L++L H + WVFN PVD + LGL DY +I+ PMDLGTVK+ L K +P++
Sbjct: 15 KKCGNILKQLSAHPNSWVFNEPVDAEKLGLPDYHIVIKRPMDLGTVKSNLEKGVLANPQQ 74
Query: 433 FAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEMGFHT 492
F +DV L F NAMTYNP+G DVH+MA+ L +FE KW
Sbjct: 75 FKDDVLLVFRNAMTYNPEGHDVHVMAKTLKVLFEGKW----------------------- 111
Query: 493 PTSRKAPPLPPPLDMRRILDRSESITHPMDSRLKPISTTPSSRTPAPKKPKAKDPHKRDM 552
++E I MD+ S + S+++ A + + D M
Sbjct: 112 -------------------SQNEGII--MDAYNNAGSASESTKSKAGSEDSSLD--NVPM 148
Query: 553 TYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD----DEIEVDIDSVDAETLWEL 608
TY+EK++LS ++ LP ++L ++V I ++NS + DE+EVDID +D TL +L
Sbjct: 149 TYEEKRELSASMNKLPGKRLASVVSFIHEKNSKILMQSGDDPDELEVDIDKLDNATLRQL 208
Query: 609 DRFVTNYKK 617
+R KK
Sbjct: 209 ERIANTKKK 217
>gi|18395937|ref|NP_566151.1| bromodomain and extraterminal domain protein 10 [Arabidopsis
thaliana]
gi|75163747|sp|Q93ZB7.1|GTE11_ARATH RecName: Full=Transcription factor GTE11; AltName: Full=BROMODOMAIN
AND EXTRATERMINAL DOMAIN PROTEIN 10; Short=AtBET10;
AltName: Full=Bromodomain-containing protein GTE11;
AltName: Full=Protein GLOBAL TRANSCRIPTION FACTOR GROUP
E11
gi|16323117|gb|AAL15293.1| AT3g01770/F28J7_10 [Arabidopsis thaliana]
gi|20466526|gb|AAM20580.1| unknown protein [Arabidopsis thaliana]
gi|22136456|gb|AAM91306.1| unknown protein [Arabidopsis thaliana]
gi|332640191|gb|AEE73712.1| bromodomain and extraterminal domain protein 10 [Arabidopsis
thaliana]
Length = 620
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 91/255 (35%), Positives = 135/255 (52%), Gaps = 35/255 (13%)
Query: 372 FKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPK 431
K C +LL++LM +H W+FN PVDV L + DYFTII+HPMDLGTVK++L Y SP
Sbjct: 130 MKQCESLLKRLMSQQHCWLFNTPVDVVKLNIPDYFTIIKHPMDLGTVKSKLTSGTYSSPS 189
Query: 432 EFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEMGFH 491
EF+ DVRLTF NAMTYNP +V+ A+ L K FE +W IE + + G E
Sbjct: 190 EFSADVRLTFRNAMTYNPSDNNVYRFADTLSKFFEVRWKTIEKKSS-----GTKSEPSNL 244
Query: 492 TPTSRKAPPLPPPLDMRRILDRSESITHPMDSRLKPISTTPSSRTPAPKKPKAKDPHKRD 551
+ K +P P+ +R ++ A K+ +P KR
Sbjct: 245 ATLAHKDIAIPEPVAKKRKMN-------------------------AVKRNSLLEPAKRV 279
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQH-DDEIEVDIDSVDAETLWELDR 610
MT +++ KL +L SL +E I+ ++ +S + DDEIE+DI+ + + L++L
Sbjct: 280 MTDEDRVKLGRDLGSL-TEFPVQIINFLRDHSSKEERSGDDEIEIDINDLSHDALFQLRD 338
Query: 611 FVTNYKKSLSKNKRK 625
+ L +N++K
Sbjct: 339 LFDEF---LRENQKK 350
>gi|413937644|gb|AFW72195.1| hypothetical protein ZEAMMB73_903470 [Zea mays]
Length = 494
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 91/247 (36%), Positives = 128/247 (51%), Gaps = 36/247 (14%)
Query: 372 FKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPK 431
FK C A+L+KLM K+ +FN PVD+ L + DYF I++ PMDLGTVK +L Y SP
Sbjct: 169 FKQCEAILKKLMTQKYSHIFNVPVDIVKLQIPDYFDIVKTPMDLGTVKKKLESGSYTSPS 228
Query: 432 EFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEMGFH 491
+FA DVRLTF+NAM YNP+G VH MA QL K+FE +W IE + E+
Sbjct: 229 DFAADVRLTFNNAMAYNPRGHAVHDMAIQLNKMFESRWRPIEKKLA-SAATEKHVEVDRA 287
Query: 492 TPTSRKAPPLPPPLDMRRILDRSESITHPMDSRLKPISTTPSSRTPAPKKPKAKDPHKRD 551
RK PP +DRS+ + +R P+ PK
Sbjct: 288 DSKRRKTPP----------VDRSD-------------VSMECARQTEPETPK-------- 316
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKK---RNSSLFQHDDEIEVDIDSVDAETLWEL 608
MT +E++ L S+ E +I +++++ N+ L D EIE+DI +V + L+EL
Sbjct: 317 MTAEEREAFGNCLASISDELPPHIFELLQQCIDSNADL-SGDGEIEIDIHAVSDDLLFEL 375
Query: 609 DRFVTNY 615
+ V Y
Sbjct: 376 KKHVDKY 382
>gi|297828570|ref|XP_002882167.1| ATBET10 [Arabidopsis lyrata subsp. lyrata]
gi|297328007|gb|EFH58426.1| ATBET10 [Arabidopsis lyrata subsp. lyrata]
Length = 622
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 93/255 (36%), Positives = 136/255 (53%), Gaps = 35/255 (13%)
Query: 372 FKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPK 431
K C LL++LM +H W+FN PVD+ L + DYFTII+HPMDLGTVK++L Y SP
Sbjct: 127 MKQCETLLKRLMSQQHCWLFNTPVDMVKLNIPDYFTIIKHPMDLGTVKSKLTSGTYSSPS 186
Query: 432 EFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEMGFH 491
EF+ DVRLTF NAMTYNP +V+ A+ L K FE +W + + G E
Sbjct: 187 EFSADVRLTFRNAMTYNPSDNNVYRFADTLSKFFEVRWKTFNKKSS-----GTKSEPSNL 241
Query: 492 TPTSRKAPPLPPPLDMRRILDRSESITHPMDSRLKPISTTPSSRTPAPKKPKAKDPHKRD 551
+RK +P PL +R ++ ++ H DS L +P KR
Sbjct: 242 GTLARKDIAMPEPLAKKRKMN---AVNH--DSLL--------------------EPAKRV 276
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQH-DDEIEVDIDSVDAETLWELDR 610
MT +++ KL +L SL +E I+ ++ +S + DDEIE+DI+ + + L++L
Sbjct: 277 MTDEDRVKLGRDLGSL-TEFPVQIINFLRDHSSKEGRSGDDEIEIDINDLSHDALFQLRD 335
Query: 611 FVTNYKKSLSKNKRK 625
+ L +N+RK
Sbjct: 336 LFDEF---LRENQRK 347
>gi|357149985|ref|XP_003575300.1| PREDICTED: transcription factor GTE9-like [Brachypodium distachyon]
Length = 705
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 104/312 (33%), Positives = 149/312 (47%), Gaps = 48/312 (15%)
Query: 371 IFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSP 430
+ K C A+L+KLM K+ +FN PVDV+ L + DY I++HPMDLGT+K +L+ Y SP
Sbjct: 163 VLKQCEAILKKLMTQKYSHIFNVPVDVEKLNIPDYNDIVKHPMDLGTIKKKLDSGSYTSP 222
Query: 431 KEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGAD--YEM 488
FA DVRLTF+NA+TYNP+G VH MA QL KIFE +W +E + AD E+
Sbjct: 223 SSFAADVRLTFNNAITYNPRGHAVHDMAIQLNKIFESRWKTVEKKLASAT---ADPHVEV 279
Query: 489 GFHTPTSRKAPPLPPPLDMRRILDRSESITHPMDSRLKPISTTPSSRTPAPKKPKAKDPH 548
RK PP+ D S P + +KP
Sbjct: 280 DRADSKRRKTPPV-------DCSDLSMECVRPTEI-VKPT-------------------- 311
Query: 549 KRDMTYDEKQKLSTNLQS------LPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDA 602
MT++EK+ L S LP +D + Q I N+ D EIE+DI ++
Sbjct: 312 ---MTFEEKESFGNCLASLSEDPELPGYIIDLLQQCIDSSNTDHL-GDGEIEIDIHALSD 367
Query: 603 ETLWELDRFVTNYKKSLSKNKRKAELA-NQARAVAQQNVQQQTPAPVVTEVRKEIRTDDR 661
+ L EL + V Y + K+E + N+A V+ + P + + + D
Sbjct: 368 DILLELKKQVGKYLQERDNQPTKSEPSENEAVNVSGLSHSSTNPC----KGGEPVEEDVD 423
Query: 662 IGSTSSPVQVEK 673
I +SP+ +EK
Sbjct: 424 ICGNASPILIEK 435
>gi|8978291|dbj|BAA98182.1| unnamed protein product [Arabidopsis thaliana]
Length = 643
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 93/254 (36%), Positives = 128/254 (50%), Gaps = 59/254 (23%)
Query: 213 ISLGSSTKREMREIRKKLEIELDTVRSLVKRIEAKEVQISGGVSNSGVLPVSDVVDNGIK 272
+L T ++RE++K+ EL +R L +RIE+ + G + +P
Sbjct: 125 FNLAGYTSSQLRELKKRFTSELKQIRILRERIESGTFETQQGYT----IP---------- 170
Query: 273 RGHSEVASVGVPVTRVGITRPSRPLNQLSISTVENSLGLSENVEKEKRTPKANQFYRNSE 332
VP R S PLN + + +N LG PK + +N
Sbjct: 171 ---------EVPAVR------SAPLN--NFTGEKNDLG-----------PKKKKQKKNVS 202
Query: 333 FLLAKDKFPPAESNKKSKLNGKKQAGNELAHGFGTGSKIFKSCSALLEKLMKHKHGWVFN 392
L ++F P++ + L G + +CS +L KLMKHK WVFN
Sbjct: 203 GLKRSNQFGPSDPESEKLLAG-----------------MLNTCSQILVKLMKHKWAWVFN 245
Query: 393 APVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQ 452
PVDV LGLHDY +++ PMDLGTVK L+K +Y SP +FA DVRLTF NAMTYNPKGQ
Sbjct: 246 TPVDVVGLGLHDYHQVVKKPMDLGTVKLNLDKGFYVSPIDFATDVRLTFDNAMTYNPKGQ 305
Query: 453 DVHIMAEQLLKIFE 466
DV+ MA++LL F+
Sbjct: 306 DVYFMADKLLDHFD 319
Score = 119 bits (297), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 58/90 (64%), Positives = 69/90 (76%)
Query: 541 KPKAKDPHKRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSV 600
KPKAKDP+KR MT +EK KL NLQ LP EKL ++QI++KRN L Q DEIE+DI++V
Sbjct: 448 KPKAKDPNKRLMTMEEKSKLGMNLQDLPPEKLGQLLQILRKRNGHLAQDGDEIELDIEAV 507
Query: 601 DAETLWELDRFVTNYKKSLSKNKRKAELAN 630
D ETLWELDRFVTNYKK SK KR+ + N
Sbjct: 508 DNETLWELDRFVTNYKKMASKIKRQGFIRN 537
>gi|168062324|ref|XP_001783131.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665381|gb|EDQ52068.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 257
Score = 145 bits (367), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 84/248 (33%), Positives = 135/248 (54%), Gaps = 39/248 (15%)
Query: 372 FKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL---NKNWYK 428
+ ++L ++ HK W F PVDVK LGLHDY+ +I PMDLGT+K ++ + + Y+
Sbjct: 1 MRQVLSILRQISSHKWAWPFMKPVDVKGLGLHDYYEVIEKPMDLGTIKNKMDAKDASGYQ 60
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKW-VVIESEYNREMRIGA--- 484
+E +DVRL F NAM YNP+G DV++M++ L + FE+KW ++E + + E+ I +
Sbjct: 61 HVQEVYQDVRLVFSNAMKYNPEGSDVYVMSKTLSEKFEEKWKTLVEPKLHEEVDIFSGIV 120
Query: 485 DYEMGFHTPTSRKAPPLPPPLDMRRILDRSESITHPMDSRLKPISTTPSSRTPAPKKPKA 544
D+++ F L S +D +L+ + K +A
Sbjct: 121 DHDLHF--------------------LMASTFFLEELDKQLEDL------------KQQA 148
Query: 545 KDPHKRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAET 604
R M+ +E++ L +L LP + L +++QII ++N S + DE+EVDID+ D T
Sbjct: 149 TPKLSRAMSVEERRHLGQSLGRLPPDNLSHVIQIIAQKNPSFNMNSDEVEVDIDAQDPAT 208
Query: 605 LWELDRFV 612
LW L R+V
Sbjct: 209 LWRLQRYV 216
>gi|297740594|emb|CBI30776.3| unnamed protein product [Vitis vinifera]
Length = 573
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 84/238 (35%), Positives = 125/238 (52%), Gaps = 38/238 (15%)
Query: 375 CSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFA 434
C+++L+KLM H GWVFN PVD L + DYF+II PMDLGT+K++L KN Y + +EFA
Sbjct: 59 CTSILKKLMTHPAGWVFNQPVDPVALNIPDYFSIISKPMDLGTIKSKLEKNMYLATEEFA 118
Query: 435 EDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEMGFHTPT 494
DVRLTF NAM YNP +VH MA++L +F +W +++ ++ ++
Sbjct: 119 ADVRLTFANAMLYNPPSNNVHQMAKKLNDLFNTRWKTVDTNWSESSKV------------ 166
Query: 495 SRKAPPLPPPLDMRRILDRSESITHPMDSRLKPISTTPSSRTPAPKKPKAKDPHKRDMTY 554
D +IL T ++S + STTPS H M++
Sbjct: 167 -----------DPGKILSGGRGKT--INSSRQKCSTTPSL-------------HANSMSF 200
Query: 555 DEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWELDRFV 612
++KQKL L + K+ + +R+ Q+ + +EV+ID D ETL EL R +
Sbjct: 201 EDKQKLRKELMEVSRGKMPPYLGGFLRRHGMTCQNIETMEVNIDKFDEETLLELRRVM 258
>gi|359483574|ref|XP_002269681.2| PREDICTED: transcription factor GTE9-like [Vitis vinifera]
Length = 588
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 84/238 (35%), Positives = 125/238 (52%), Gaps = 38/238 (15%)
Query: 375 CSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFA 434
C+++L+KLM H GWVFN PVD L + DYF+II PMDLGT+K++L KN Y + +EFA
Sbjct: 74 CTSILKKLMTHPAGWVFNQPVDPVALNIPDYFSIISKPMDLGTIKSKLEKNMYLATEEFA 133
Query: 435 EDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEMGFHTPT 494
DVRLTF NAM YNP +VH MA++L +F +W +++ ++ ++
Sbjct: 134 ADVRLTFANAMLYNPPSNNVHQMAKKLNDLFNTRWKTVDTNWSESSKV------------ 181
Query: 495 SRKAPPLPPPLDMRRILDRSESITHPMDSRLKPISTTPSSRTPAPKKPKAKDPHKRDMTY 554
D +IL T ++S + STTPS H M++
Sbjct: 182 -----------DPGKILSGGRGKT--INSSRQKCSTTPSL-------------HANSMSF 215
Query: 555 DEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWELDRFV 612
++KQKL L + K+ + +R+ Q+ + +EV+ID D ETL EL R +
Sbjct: 216 EDKQKLRKELMEVSRGKMPPYLGGFLRRHGMTCQNIETMEVNIDKFDEETLLELRRVM 273
>gi|302834497|ref|XP_002948811.1| hypothetical protein VOLCADRAFT_104017 [Volvox carteri f.
nagariensis]
gi|300266002|gb|EFJ50191.1| hypothetical protein VOLCADRAFT_104017 [Volvox carteri f.
nagariensis]
Length = 767
Score = 145 bits (366), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 92/245 (37%), Positives = 126/245 (51%), Gaps = 31/245 (12%)
Query: 371 IFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSP 430
I++ C A+L+ LMK K+ VF PVD G+ DYF I HPMDLGT+KTRL + Y P
Sbjct: 97 IWRMCGAVLDFLMKKKNAIVFLRPVDPVKDGVPDYFKFICHPMDLGTIKTRLRERKYSDP 156
Query: 431 KEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEMGF 490
+EFA DVRL + N TYN G V IM +QL + +E KW +E N E R A
Sbjct: 157 REFAADVRLVWRNCATYNAVGTPVRIMGDQLSEDWERKW----AELNVEQRWDA------ 206
Query: 491 HTPTSRKAPPLPPPLDMRRILDRSESITHPMDSRLKPISTTPSSRTPAPKKPKAKDPHKR 550
+R P PLD +RI + + R+ + P + DP R
Sbjct: 207 -LVATRD--PQTIPLD-QRIASSARQLLQ----RVNSVHVLPDA-----------DPS-R 246
Query: 551 DMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWELD 609
MT EK+KLS L L +L +++ II + + D +EIE+D+D +D +TLW L
Sbjct: 247 TMTTVEKRKLSIALSELQGNQLADVLNIIAENLKDINPDDEEEIELDVDQLDNQTLWRLR 306
Query: 610 RFVTN 614
+ N
Sbjct: 307 EYCDN 311
>gi|224060209|ref|XP_002300086.1| global transcription factor group [Populus trichocarpa]
gi|222847344|gb|EEE84891.1| global transcription factor group [Populus trichocarpa]
Length = 630
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 117/340 (34%), Positives = 176/340 (51%), Gaps = 39/340 (11%)
Query: 371 IFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSP 430
+ K C LL++LM H++GWVFN+PVD+ L + DY+T+I++PMDLGT+K++++ Y SP
Sbjct: 115 LMKQCETLLKRLMSHQYGWVFNSPVDIVKLNIPDYYTVIKNPMDLGTIKSKISSGAYSSP 174
Query: 431 KEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEMGF 490
EF DVRLTF NAM YNP+G D +IMA+ L K FE +W IE + R G
Sbjct: 175 LEFMADVRLTFKNAMVYNPQGSDAYIMADTLNKFFEMRWKAIEKKLPRAGGEVLQENSGP 234
Query: 491 HTPTSRKAPPLPPPLDMRRILDRSESITHPMDSRLKPISTTPSSRTPAPKKPKAKDPHKR 550
H D + T P R T P +P KR
Sbjct: 235 HE-------------------DFETAETSPAKKR----KVTSFQHDIMP------EPGKR 265
Query: 551 DMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQH--DDEIEVDIDSVDAETLWEL 608
MT +E+ L L+SL E NI+ +++ SS +H ++EIE+DID + +TL+ L
Sbjct: 266 GMTDEERLNLGRELESLLGEMPVNIIDFLREHCSS-GRHGGEEEIEIDIDELSDDTLFTL 324
Query: 609 DRFVTNYKKSLSKNKRKA-----ELANQARAVAQQNVQQQTPAPVVTEVRKEIRTDDRIG 663
+ + +Y + KN+ + EL N++ + ++QQ+ + E +I +
Sbjct: 325 RKLLDDYLQEKRKNQTRGEPCEIELLNES-GPSNSSMQQKKGNDLGDE-EIDIGGNGPPV 382
Query: 664 STSSPVQVEKQVDNGSRSSSSSSSSSDSGSSSSDSDSETS 703
S+ PV++EK+ D G +SS SS SS S D +TS
Sbjct: 383 SSYQPVEIEKEKDTGHKSSKISSDSSSESVSGLDQLEQTS 422
>gi|238481625|ref|NP_001154792.1| nuclear protein X1 [Arabidopsis thaliana]
gi|238481627|ref|NP_001154793.1| nuclear protein X1 [Arabidopsis thaliana]
gi|10177441|dbj|BAB10737.1| unnamed protein product [Arabidopsis thaliana]
gi|50253452|gb|AAT71928.1| At5g63330 [Arabidopsis thaliana]
gi|60543335|gb|AAX22265.1| At5g63330 [Arabidopsis thaliana]
gi|332010350|gb|AED97733.1| nuclear protein X1 [Arabidopsis thaliana]
gi|332010351|gb|AED97734.1| nuclear protein X1 [Arabidopsis thaliana]
Length = 477
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 98/297 (32%), Positives = 145/297 (48%), Gaps = 46/297 (15%)
Query: 339 KFPPAESNKKSKLNGKKQAGNELAHGFGTGSKIFKSCSALLEKLMKHKHGWVFNAPVDVK 398
K PP S+K+ G + ++ T + + K C LL +L HK GW F PVD
Sbjct: 132 KRPPVRSDKQRNKKGPSRLNVPTSY---TVASVMKECETLLNRLWSHKSGWPFRTPVDPV 188
Query: 399 NLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMA 458
L + DYF +I+HPMDLGT+++RL K Y SP +FA DVRLTF N++ YNP G H MA
Sbjct: 189 MLNIPDYFNVIKHPMDLGTIRSRLCKGEYSSPLDFAADVRLTFSNSIAYNPPGNQFHTMA 248
Query: 459 EQLLKIFEDKWVVIESEYNREMRIGADYEMGFHTPTSRKAPPLPPPLDMRRILDRSESIT 518
+ + K FE W IE + P S+ PP+ P L S S+
Sbjct: 249 QGISKYFESGWKSIEKK----------------IPMSK--PPVIP-------LTSSASLE 283
Query: 519 HPMDSRLKPISTTPSSRTPAPKKPKAK-------DPHKRDMTYDEKQKLSTNLQSLPSEK 571
S P P KK A +P K MT EK+KL +L +L +
Sbjct: 284 ----------SEIPFEVAPMRKKEAAMNDNKLRVEPAKLVMTDGEKKKLGQDLMALEEDF 333
Query: 572 LDNIVQIIKKRNSSLFQH-DDEIEVDIDSVDAETLWELDRFVTNYKKSLSKNKRKAE 627
I ++++++ S Q + EIE+DI+++ E L+ + + + +Y + K+ K+E
Sbjct: 334 PQKIADLLREQSGSDGQSGEGEIEIDIEALSDEILFMVRKLLDDYLREKKKSMEKSE 390
>gi|297797597|ref|XP_002866683.1| hypothetical protein ARALYDRAFT_919899 [Arabidopsis lyrata subsp.
lyrata]
gi|297312518|gb|EFH42942.1| hypothetical protein ARALYDRAFT_919899 [Arabidopsis lyrata subsp.
lyrata]
Length = 577
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/259 (37%), Positives = 129/259 (49%), Gaps = 69/259 (26%)
Query: 213 ISLGSSTKREMREIRKKLEIELDTVRSLVKRIEAKEVQISGGVSNSGVLPVSDVVDNGIK 272
++ T ++RE++K+ EL+ +R L +RIE SG + +V
Sbjct: 70 FNIAGYTSNQLRELKKRFTSELEQIRILRERIE------SGTFETQQAYTIPEV------ 117
Query: 273 RGHSEVASVGVPVTRVGITRPSRPLNQLSISTVENSLG-----LSENVEKEKRTPKANQF 327
P R S PLN S + +N LG +NV KR NQF
Sbjct: 118 -----------PAVR------SAPLN--SFAGEKNDLGPKKKKQKKNVSGLKR---GNQF 155
Query: 328 YRNSEFLLAKDKFPPAESNKKSKLNGKKQAGNELAHGFGTGSKIFKSCSALLEKLMKHKH 387
A S+ +S+ K AG + +C +L KLMKHK
Sbjct: 156 ---------------ATSDPESE---KLLAG------------MLNTCGQILVKLMKHKW 185
Query: 388 GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTY 447
WVFN PVDV LGLHDY +++ PMDLGTVK L+K +Y SP +FA DVRLTF+NAMTY
Sbjct: 186 AWVFNTPVDVVGLGLHDYHQVVKKPMDLGTVKLNLDKGFYVSPIDFATDVRLTFNNAMTY 245
Query: 448 NPKGQDVHIMAEQLLKIFE 466
NPKGQDV+ MA++LL F+
Sbjct: 246 NPKGQDVYFMADKLLDHFD 264
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/90 (65%), Positives = 69/90 (76%)
Query: 541 KPKAKDPHKRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSV 600
KPKAKDP+KR MT +EK KL NLQ LP EKL +VQI++KRN L Q DEIE+DI++V
Sbjct: 384 KPKAKDPNKRLMTMEEKSKLGMNLQDLPPEKLGQLVQILRKRNGHLAQDGDEIELDIEAV 443
Query: 601 DAETLWELDRFVTNYKKSLSKNKRKAELAN 630
D ETLWELDRFVTNYKK SK KR+ + N
Sbjct: 444 DNETLWELDRFVTNYKKMASKIKRQGFIRN 473
>gi|413921385|gb|AFW61317.1| hypothetical protein ZEAMMB73_074233 [Zea mays]
Length = 770
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 93/277 (33%), Positives = 137/277 (49%), Gaps = 41/277 (14%)
Query: 372 FKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPK 431
FK C+ LL+ LM H F PVD+ L + DYF I++ PMDLGT++ R+ Y +P
Sbjct: 173 FKQCANLLKSLMSHVWASPFLVPVDIVKLNIPDYFQIVKQPMDLGTIQKRMKAGMYSTPP 232
Query: 432 EFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEMGFH 491
EFA DVRLTF NAM YNP DVH+MA+ L K FE +W +IE + +
Sbjct: 233 EFAADVRLTFSNAMNYNPANNDVHLMAKTLSKNFESRWKLIEKKLPKPDE---------K 283
Query: 492 TPTSRKAPPLP---PPL-------DMRRILDRSESITHPM---------------DSRLK 526
P + PP P PP+ +R+ E +T DS
Sbjct: 284 PPQPDEKPPQPVEKPPVRKPTKKNSTKRVSIEKEDLTKKKPSKKSVPKQYIFRGEDSADS 343
Query: 527 PISTTPSSRTPAP---KKPKAKD---PHKRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIK 580
P+ P R +P P D KR MT ++K LS LQS + D++V++I+
Sbjct: 344 PV-LQPKKRKTSPLVQDAPLVGDIVPTRKRIMTSEQKYDLSARLQSYGAFIPDHVVELIR 402
Query: 581 KRNSSLFQHDDEIEVDIDSVDAETLWELDRFVTNYKK 617
+++E+E+D+D++ +TL+EL R + +Y +
Sbjct: 403 SHADYCDANEEELELDMDALGDDTLFELLRLLDDYDR 439
>gi|147826573|emb|CAN72911.1| hypothetical protein VITISV_007433 [Vitis vinifera]
Length = 588
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 83/238 (34%), Positives = 124/238 (52%), Gaps = 38/238 (15%)
Query: 375 CSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFA 434
C+++L+ LM H GWVFN PVD L + DYF+II PMDLGT+K++L KN Y + +EFA
Sbjct: 74 CTSILKXLMTHPAGWVFNQPVDPVALNIPDYFSIISKPMDLGTIKSKLEKNXYLATEEFA 133
Query: 435 EDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEMGFHTPT 494
DVRLTF NAM YNP +VH MA++L +F +W +++ ++ ++
Sbjct: 134 ADVRLTFANAMLYNPPSNNVHQMAKKLNDLFNTRWKTVDTNWSESSKV------------ 181
Query: 495 SRKAPPLPPPLDMRRILDRSESITHPMDSRLKPISTTPSSRTPAPKKPKAKDPHKRDMTY 554
D +IL T ++S + STTPS H M++
Sbjct: 182 -----------DPGKILSGGRGKT--INSSRQKCSTTPSL-------------HANSMSF 215
Query: 555 DEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWELDRFV 612
++KQKL L + K+ + +R+ Q+ + +EV+ID D ETL EL R +
Sbjct: 216 EDKQKLRKELMEVSRGKMPPYLGGFLRRHGMTCQNIETMEVNIDKFDEETLLELRRVM 273
>gi|224116480|ref|XP_002317311.1| global transcription factor group [Populus trichocarpa]
gi|222860376|gb|EEE97923.1| global transcription factor group [Populus trichocarpa]
Length = 567
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 63/109 (57%), Positives = 77/109 (70%)
Query: 371 IFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSP 430
+ + CSALL+ LM H GWVFN PVD L + DYF+II PMDLGTVK++L KN Y S
Sbjct: 86 VTQQCSALLKSLMVHPAGWVFNKPVDPVALNIPDYFSIISIPMDLGTVKSKLGKNCYASI 145
Query: 431 KEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNRE 479
KEFA+D+RLTF NAM YNP +VH MAE+L IFE W +E ++N E
Sbjct: 146 KEFADDIRLTFSNAMLYNPPTNNVHKMAEELNGIFETSWKALEDKWNHE 194
>gi|297826963|ref|XP_002881364.1| imbibition-inducible 1 [Arabidopsis lyrata subsp. lyrata]
gi|297327203|gb|EFH57623.1| imbibition-inducible 1 [Arabidopsis lyrata subsp. lyrata]
Length = 386
Score = 140 bits (353), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 87/266 (32%), Positives = 135/266 (50%), Gaps = 19/266 (7%)
Query: 357 AGNELAHGFGTGS-KIFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDL 415
AG E + G S + + + + ++ +HK W F PVDVK LGLHDY+ +I PMDL
Sbjct: 95 AGKEKSKGKHVSSPDLMRQFATMFRQIAQHKWAWPFLEPVDVKGLGLHDYYKVIEKPMDL 154
Query: 416 GTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
GT+K ++ + Y + +E DVRL F NAM YN + +DV++MAE LL+ FE+KW++I +
Sbjct: 155 GTIKKKMESSEYSNVREIYADVRLVFKNAMRYNEEKEDVYVMAESLLEKFEEKWLLIMPK 214
Query: 476 YNREMRIGADYEMGFHTPTSRKAPPLPPPLDMRRILDRSESITHPMDSRLKPISTTPSSR 535
E + AD E H +++ +M R L + +D +L+ + + R
Sbjct: 215 LVEEEKKQADEEAEKH--ANKQLTLEAAQAEMARDLSNE---LYEIDLQLERLRESVVQR 269
Query: 536 TPAPKKPKAKDPHKRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEV 595
R ++ EK+ LS L L E L ++++ + N S E+E+
Sbjct: 270 C-------------RKLSTQEKKGLSAALGRLSPEDLSKALKMVSESNPSFPAGAPEVEL 316
Query: 596 DIDSVDAETLWELDRFVTNYKKSLSK 621
DID TLW L FV K+ +K
Sbjct: 317 DIDVQTDVTLWRLKVFVQEALKAANK 342
>gi|218199690|gb|EEC82117.1| hypothetical protein OsI_26141 [Oryza sativa Indica Group]
Length = 484
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 58/104 (55%), Positives = 76/104 (73%)
Query: 373 KSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKE 432
+ C ++L+KLM HK GW+FN PVD G+ DYF +IR+PMDLGTVK +L Y +P E
Sbjct: 63 RQCGSILKKLMDHKSGWIFNTPVDPVVYGIPDYFDVIRNPMDLGTVKRKLTSKQYSNPYE 122
Query: 433 FAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEY 476
FA DVRLTF NAM YNP G DVH +A+QL KIF+ +W ++E ++
Sbjct: 123 FAADVRLTFSNAMKYNPPGNDVHAIADQLNKIFDSEWKLLERKW 166
>gi|413921384|gb|AFW61316.1| hypothetical protein ZEAMMB73_074233 [Zea mays]
Length = 558
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 93/277 (33%), Positives = 137/277 (49%), Gaps = 41/277 (14%)
Query: 372 FKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPK 431
FK C+ LL+ LM H F PVD+ L + DYF I++ PMDLGT++ R+ Y +P
Sbjct: 173 FKQCANLLKSLMSHVWASPFLVPVDIVKLNIPDYFQIVKQPMDLGTIQKRMKAGMYSTPP 232
Query: 432 EFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEMGFH 491
EFA DVRLTF NAM YNP DVH+MA+ L K FE +W +IE + +
Sbjct: 233 EFAADVRLTFSNAMNYNPANNDVHLMAKTLSKNFESRWKLIEKKLPKPDE---------K 283
Query: 492 TPTSRKAPPLP---PPL-------DMRRILDRSESITHPM---------------DSRLK 526
P + PP P PP+ +R+ E +T DS
Sbjct: 284 PPQPDEKPPQPVEKPPVRKPTKKNSTKRVSIEKEDLTKKKPSKKSVPKQYIFRGEDSADS 343
Query: 527 PISTTPSSRTPAP---KKPKAKD---PHKRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIK 580
P+ P R +P P D KR MT ++K LS LQS + D++V++I+
Sbjct: 344 PV-LQPKKRKTSPLVQDAPLVGDIVPTRKRIMTSEQKYDLSARLQSYGAFIPDHVVELIR 402
Query: 581 KRNSSLFQHDDEIEVDIDSVDAETLWELDRFVTNYKK 617
+++E+E+D+D++ +TL+EL R + +Y +
Sbjct: 403 SHADYCDANEEELELDMDALGDDTLFELLRLLDDYDR 439
>gi|294462729|gb|ADE76909.1| unknown [Picea sitchensis]
Length = 377
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 95/299 (31%), Positives = 149/299 (49%), Gaps = 36/299 (12%)
Query: 348 KSKLNGKKQ--AGNELAHGFGTGSKIFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDY 405
K LN +KQ A A +++ + S +L ++ +H+ W F PVDVK LGLHDY
Sbjct: 84 KINLNHRKQQEASRREAGCSKRMAELMRQFSTILRQITQHRWAWPFMTPVDVKGLGLHDY 143
Query: 406 FTIIRHPMDLGTVKTRLNKN---WYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLL 462
+I+ PMD GT++ +++ YK+ + EDVRL F NA+TYN DVH+MA+ L
Sbjct: 144 HDVIKKPMDFGTIRRKMDAKDATGYKNVCDICEDVRLVFKNAVTYNDDQSDVHVMAKTLS 203
Query: 463 KIFEDKWVVIESEYNREMRIGADYEMGFHTPTSRKA--PPLPPPLDMRRILDRSESITHP 520
+ FE+KW + + N E E SR+ L D+ ++ + +
Sbjct: 204 QKFEEKWKTLWPKVNEEEARRKKEEAD---ANSREMVDSRLSGETDLEKLGGELDELNEH 260
Query: 521 MDSRLKPISTTPSSRTPAPKKPKAKDPHKRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIK 580
++ + ++ P R M+ +EK++L +L L E L +QII
Sbjct: 261 LEKLRQELA-----------------PKCRMMSVEEKRQLGESLGKLSPEDLTKALQIIA 303
Query: 581 KRNSSLFQHDDEIEVDIDSVDAETLWELDRFV---------TNYKKSLSKNKRKAELAN 630
++N S +DE+E+DID+ DA TLW L FV T+ K+ +K KRK E+ +
Sbjct: 304 QKNPSFIPTEDEVELDIDAQDASTLWRLQYFVKAVLSVQAKTSIAKAQAKTKRKKEICD 362
>gi|224061031|ref|XP_002300324.1| global transcription factor group [Populus trichocarpa]
gi|222847582|gb|EEE85129.1| global transcription factor group [Populus trichocarpa]
Length = 564
Score = 139 bits (351), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 61/109 (55%), Positives = 76/109 (69%)
Query: 371 IFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSP 430
+ + CS+LL+ LM H GWVFN PVD L + DYFT+I +PMDLGTVK++L KN+Y S
Sbjct: 81 VTQQCSSLLKSLMAHPAGWVFNKPVDPVALKIPDYFTVISNPMDLGTVKSKLGKNFYASI 140
Query: 431 KEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNRE 479
EFA D+RLTF NAM YNP +VH MAE+L IFE W +E +N E
Sbjct: 141 NEFAADIRLTFSNAMLYNPPSNNVHRMAEELNGIFETGWKALEENWNHE 189
>gi|30686240|ref|NP_181036.2| Transcription factor GTE6 [Arabidopsis thaliana]
gi|75148956|sp|Q84XV2.1|GTE1_ARATH RecName: Full=Transcription factor GTE1; AltName:
Full=Bromodomain-containing protein GTE1; AltName:
Full=Protein GLOBAL TRANSCRIPTION FACTOR GROUP E1;
AltName: Full=Protein IMBIBITION-INDUCIBLE 1
gi|27803868|gb|AAO22056.1| IMB1 [Arabidopsis thaliana]
gi|110741364|dbj|BAF02232.1| RING3 protein-like [Arabidopsis thaliana]
gi|111074406|gb|ABH04576.1| At2g34900 [Arabidopsis thaliana]
gi|330253943|gb|AEC09037.1| Transcription factor GTE6 [Arabidopsis thaliana]
Length = 386
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 86/266 (32%), Positives = 134/266 (50%), Gaps = 19/266 (7%)
Query: 357 AGNELAHGFGTGS-KIFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDL 415
AG E + G S + + + + ++ +HK W F PVDVK LGLHDY+ +I PMDL
Sbjct: 95 AGKEKSKGKHVSSPDLMRQFATMFRQIAQHKWAWPFLEPVDVKGLGLHDYYKVIEKPMDL 154
Query: 416 GTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
GT+K ++ + Y + +E DVRL F NAM YN + +DV++MAE LL+ FE+KW++I +
Sbjct: 155 GTIKKKMESSEYSNVREIYADVRLVFKNAMRYNEEKEDVYVMAESLLEKFEEKWLLIMPK 214
Query: 476 YNREMRIGADYEMGFHTPTSRKAPPLPPPLDMRRILDRSESITHPMDSRLKPISTTPSSR 535
E + D E H +++ +M R L + +D +L+ + + R
Sbjct: 215 LVEEEKKQVDEEAEKH--ANKQLTMEAAQAEMARDLSNE---LYEIDLQLEKLRESVVQR 269
Query: 536 TPAPKKPKAKDPHKRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEV 595
R ++ EK+ LS L L E L ++++ + N S E+E+
Sbjct: 270 C-------------RKLSTQEKKGLSAALGRLSPEDLSKALKMVSESNPSFPAGAPEVEL 316
Query: 596 DIDSVDAETLWELDRFVTNYKKSLSK 621
DID TLW L FV K+ +K
Sbjct: 317 DIDVQTDVTLWRLKVFVQEALKAANK 342
>gi|115472285|ref|NP_001059741.1| Os07g0507700 [Oryza sativa Japonica Group]
gi|33146482|dbj|BAC79591.1| putative RING3 protein [Oryza sativa Japonica Group]
gi|113611277|dbj|BAF21655.1| Os07g0507700 [Oryza sativa Japonica Group]
gi|215717115|dbj|BAG95478.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 484
Score = 139 bits (349), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 58/104 (55%), Positives = 76/104 (73%)
Query: 373 KSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKE 432
+ C ++L+KLM HK GW+FN PVD G+ DYF +IR+PMDLGTVK +L Y +P E
Sbjct: 63 RQCGSILKKLMDHKSGWIFNTPVDPVVYGIPDYFDVIRNPMDLGTVKRKLTSKQYSNPYE 122
Query: 433 FAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEY 476
FA DVRLTF NAM YNP G DVH +A+QL KIF+ +W ++E ++
Sbjct: 123 FAADVRLTFSNAMKYNPPGNDVHGIADQLNKIFDSEWKLLERKW 166
>gi|222637108|gb|EEE67240.1| hypothetical protein OsJ_24385 [Oryza sativa Japonica Group]
Length = 536
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 58/104 (55%), Positives = 76/104 (73%)
Query: 373 KSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKE 432
+ C ++L+KLM HK GW+FN PVD G+ DYF +IR+PMDLGTVK +L Y +P E
Sbjct: 115 RQCGSILKKLMDHKSGWIFNTPVDPVVYGIPDYFDVIRNPMDLGTVKRKLTSKQYSNPYE 174
Query: 433 FAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEY 476
FA DVRLTF NAM YNP G DVH +A+QL KIF+ +W ++E ++
Sbjct: 175 FAADVRLTFSNAMKYNPPGNDVHGIADQLNKIFDSEWKLLERKW 218
>gi|297789895|ref|XP_002862870.1| hypothetical protein ARALYDRAFT_497270 [Arabidopsis lyrata subsp.
lyrata]
gi|297308629|gb|EFH39129.1| hypothetical protein ARALYDRAFT_497270 [Arabidopsis lyrata subsp.
lyrata]
Length = 547
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 68/138 (49%), Positives = 90/138 (65%), Gaps = 5/138 (3%)
Query: 333 FLLAKDKFPPAESNKKSKLNGKKQAGNELAHGFGTGSKIFK----SCSALLEKLMKHKHG 388
F K+ P + +K ++G K++ N+ K+ +C +L KLMKHK
Sbjct: 128 FAGEKNDLGPKKKKQKKNVSGLKRS-NQFTDSDPESEKLLAGMLNTCGQILVKLMKHKWA 186
Query: 389 WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYN 448
WVFN PVDV LGLHDY +++ PMDLGTVK L+K +Y SP +FA DVRLTF+NAMTYN
Sbjct: 187 WVFNTPVDVVGLGLHDYHQVVKKPMDLGTVKLNLDKGFYVSPIDFATDVRLTFNNAMTYN 246
Query: 449 PKGQDVHIMAEQLLKIFE 466
PKGQDV+ MA++LL F+
Sbjct: 247 PKGQDVYFMADKLLDHFD 264
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 33/52 (63%), Gaps = 5/52 (9%)
Query: 537 PAPKKPKAKDPHKRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQ 588
P K DP+KR MT ++K KL NLQ LP EKL +VQI++KRN L Q
Sbjct: 385 PKAK-----DPNKRLMTIEQKSKLGMNLQDLPPEKLGQLVQILRKRNGHLAQ 431
>gi|3033386|gb|AAC12830.1| putative RING3 protein [Arabidopsis thaliana]
Length = 400
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/267 (32%), Positives = 135/267 (50%), Gaps = 7/267 (2%)
Query: 357 AGNELAHGFGTGS-KIFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDL 415
AG E + G S + + + + ++ +HK W F PVDVK LGLHDY+ +I PMDL
Sbjct: 95 AGKEKSKGKHVSSPDLMRQFATMFRQIAQHKWAWPFLEPVDVKGLGLHDYYKVIEKPMDL 154
Query: 416 GTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
GT+K ++ + Y + +E DVRL F NAM YN + +DV++MAE LL+ FE+KW++I +
Sbjct: 155 GTIKKKMESSEYSNVREIYADVRLVFKNAMRYNEEKEDVYVMAESLLEKFEEKWLLIMPK 214
Query: 476 YNREMRIGADYEMGFHTPTSRKAPPLPPPLDMRRILDRSESITHPMDSRLKPISTTPSSR 535
E + D E H +++ +M R L + +D +L+ + + R
Sbjct: 215 LVEEEKKQVDEEAEKH--ANKQLTMEAAQAEMARDLSNE---LYEIDLQLEKLRESVVQR 269
Query: 536 TPAPKKPKAKDPH-KRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIE 594
+ R ++ EK+ LS L L E L ++++ + N S E+E
Sbjct: 270 CRVRNRVFGVVLEINRKLSTQEKKGLSAALGRLSPEDLSKALKMVSESNPSFPAGAPEVE 329
Query: 595 VDIDSVDAETLWELDRFVTNYKKSLSK 621
+DID TLW L FV K+ +K
Sbjct: 330 LDIDVQTDVTLWRLKVFVQEALKAANK 356
>gi|327488240|sp|Q9LXA7.2|GTE2_ARATH RecName: Full=Transcription factor GTE2; AltName:
Full=Bromodomain-containing protein GTE2; AltName:
Full=Protein GLOBAL TRANSCRIPTION FACTOR GROUP E2
Length = 581
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 62/100 (62%), Positives = 72/100 (72%), Gaps = 1/100 (1%)
Query: 371 IFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSP 430
+ +C +L KLMKHK WVF PVDV LGLHDY I+ PMDLGTVK L K Y+SP
Sbjct: 174 MMTTCGQILVKLMKHKWSWVFLNPVDVVGLGLHDYHRIVDKPMDLGTVKMNLEKGLYRSP 233
Query: 431 KEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWV 470
+FA DVRLTF NAM+YNPKGQDV++MAE+LL F D W
Sbjct: 234 IDFASDVRLTFTNAMSYNPKGQDVYLMAEKLLSQF-DVWF 272
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/102 (47%), Positives = 62/102 (60%), Gaps = 24/102 (23%)
Query: 541 KPKAKDPHKRDMTYDEK------------QKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQ 588
KPKAKDP+KR+MT DEK +KL ++QI++KR L Q
Sbjct: 388 KPKAKDPNKREMTMDEKGKLGVNLQELPPEKLGQ------------LIQILRKRTRDLPQ 435
Query: 589 HDDEIEVDIDSVDAETLWELDRFVTNYKKSLSKNKRKAELAN 630
DEIE+DI+++D ETLWELDRFVTNY+K SK KR+ + N
Sbjct: 436 DGDEIELDIEALDNETLWELDRFVTNYRKMASKIKRQGFIQN 477
>gi|297797327|ref|XP_002866548.1| DNA-binding bromodomain-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312383|gb|EFH42807.1| DNA-binding bromodomain-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 486
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 94/263 (35%), Positives = 144/263 (54%), Gaps = 31/263 (11%)
Query: 367 TGSKIFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNW 426
T + + K C LL +L HK GW F PVD L + DYFT+I+HPMDLGT+++RL K
Sbjct: 166 TVASVMKECETLLNRLWSHKLGWAFRTPVDPVMLNIPDYFTVIKHPMDLGTIRSRLRKGE 225
Query: 427 YKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADY 486
Y SP +FA DVRLTF N++ YNP G H MA+ + K FE W IE +
Sbjct: 226 YSSPLDFAADVRLTFSNSIAYNPPGNQFHTMAQGISKYFETGWKSIEKK----------- 274
Query: 487 EMGFHTPTSRKAPPLPPPLDMRRILDRSESITHPMDSRLKPISTTPSSRTPAPKKPKAK- 545
P ++ PP+ P L S S+ + + P+ +++ A + K +
Sbjct: 275 -----IPVTK--PPVIP-------LTSSASLESEIPFEVAPL----RNKSAAMNESKLRV 316
Query: 546 DPHKRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQ-HDDEIEVDIDSVDAET 604
+P K MT DEK+KLS +L +L E NI ++++++ S Q + EIE+DI+++ ET
Sbjct: 317 EPAKLVMTDDEKKKLSQDLVALEEEFPQNISDLLREQSGSDGQSEEVEIEIDIETLSDET 376
Query: 605 LWELDRFVTNYKKSLSKNKRKAE 627
L+ + + + +Y + K+ K+E
Sbjct: 377 LFMVRKLLDDYLREKKKSLEKSE 399
>gi|15238195|ref|NP_196617.1| global transcription factor group E2 [Arabidopsis thaliana]
gi|7671448|emb|CAB89388.1| bromodomain protein-like [Arabidopsis thaliana]
gi|332004179|gb|AED91562.1| global transcription factor group E2 [Arabidopsis thaliana]
Length = 678
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 62/100 (62%), Positives = 72/100 (72%), Gaps = 1/100 (1%)
Query: 371 IFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSP 430
+ +C +L KLMKHK WVF PVDV LGLHDY I+ PMDLGTVK L K Y+SP
Sbjct: 249 MMTTCGQILVKLMKHKWSWVFLNPVDVVGLGLHDYHRIVDKPMDLGTVKMNLEKGLYRSP 308
Query: 431 KEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWV 470
+FA DVRLTF NAM+YNPKGQDV++MAE+LL F D W
Sbjct: 309 IDFASDVRLTFTNAMSYNPKGQDVYLMAEKLLSQF-DVWF 347
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/102 (47%), Positives = 62/102 (60%), Gaps = 24/102 (23%)
Query: 541 KPKAKDPHKRDMTYDEK------------QKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQ 588
KPKAKDP+KR+MT DEK +KL ++QI++KR L Q
Sbjct: 463 KPKAKDPNKREMTMDEKGKLGVNLQELPPEKLGQ------------LIQILRKRTRDLPQ 510
Query: 589 HDDEIEVDIDSVDAETLWELDRFVTNYKKSLSKNKRKAELAN 630
DEIE+DI+++D ETLWELDRFVTNY+K SK KR+ + N
Sbjct: 511 DGDEIELDIEALDNETLWELDRFVTNYRKMASKIKRQGFIQN 552
>gi|62321808|dbj|BAD95432.1| RING3 protein-like [Arabidopsis thaliana]
Length = 386
Score = 136 bits (343), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 85/266 (31%), Positives = 133/266 (50%), Gaps = 19/266 (7%)
Query: 357 AGNELAHGFGTGS-KIFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDL 415
AG E + G S + + + + ++ +HK W F PVDVK LGLHDY+ +I PMDL
Sbjct: 95 AGKEKSKGKHVSSPDLMRQFATMFRQIAQHKWAWPFLEPVDVKGLGLHDYYKVIEKPMDL 154
Query: 416 GTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
GT+K ++ + Y + +E DVRL F NAM YN + +DV++MAE LL+ FE+KW++I +
Sbjct: 155 GTIKKKMESSEYSNVREIYADVRLVFKNAMRYNEEKEDVYVMAESLLEKFEEKWLLIMPK 214
Query: 476 YNREMRIGADYEMGFHTPTSRKAPPLPPPLDMRRILDRSESITHPMDSRLKPISTTPSSR 535
E + D E H +++ +M R L + +D +L+ + + R
Sbjct: 215 LVEEEKKQVDEEAEKH--ANKQLTMEAAQAEMARDLSNE---LYEIDLQLEKLRESVVQR 269
Query: 536 TPAPKKPKAKDPHKRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEV 595
R ++ EK+ LS L L E L ++++ + N S E+ +
Sbjct: 270 C-------------RKLSTQEKKGLSAALGRLSPEDLSKALKMVSESNPSFPAGAPEVGL 316
Query: 596 DIDSVDAETLWELDRFVTNYKKSLSK 621
DID TLW L FV K+ +K
Sbjct: 317 DIDVQTDVTLWRLKVFVQEALKAANK 342
>gi|357447117|ref|XP_003593834.1| Bromodomain-containing factor [Medicago truncatula]
gi|355482882|gb|AES64085.1| Bromodomain-containing factor [Medicago truncatula]
Length = 520
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 58/105 (55%), Positives = 77/105 (73%)
Query: 375 CSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFA 434
C+ +L+ L+ H + WVF PVD L + DYFT+I HPMDLGT+K +L+KN Y S +EFA
Sbjct: 83 CATILKCLISHPYSWVFKTPVDPVALNIPDYFTVISHPMDLGTIKFKLDKNIYYSKEEFA 142
Query: 435 EDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNRE 479
DVRLTF NAMTYNP DVH+MA++L K+FE KW ++ ++N E
Sbjct: 143 ADVRLTFSNAMTYNPPSNDVHLMAKELNKLFERKWKDMDKKWNFE 187
>gi|449433591|ref|XP_004134581.1| PREDICTED: transcription factor GTE11-like [Cucumis sativus]
gi|449523269|ref|XP_004168646.1| PREDICTED: transcription factor GTE11-like [Cucumis sativus]
Length = 569
Score = 135 bits (340), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 56/104 (53%), Positives = 78/104 (75%)
Query: 373 KSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKE 432
+ CS++L+ LM H+ GWVFN PVD L + DYF+II PMDLGTVK++L +N Y++ +E
Sbjct: 109 QQCSSILKTLMTHRFGWVFNQPVDPVALKIPDYFSIITDPMDLGTVKSKLERNLYQASEE 168
Query: 433 FAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEY 476
FA D+RLTF NAM YNP G VH MA++LL+ FE KW++ + ++
Sbjct: 169 FAADIRLTFSNAMLYNPSGNHVHKMAKELLENFEKKWILPKEKW 212
>gi|356549150|ref|XP_003542960.1| PREDICTED: transcription factor GTE8-like [Glycine max]
Length = 566
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 71/95 (74%)
Query: 375 CSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFA 434
C+ +L+ LM H + WVF PVD L + DYFTII HPMDLGT+K++L +N Y +EFA
Sbjct: 83 CATILKSLMSHSYSWVFLKPVDPVALSIPDYFTIISHPMDLGTIKSKLERNIYSGTEEFA 142
Query: 435 EDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKW 469
+DVRLTF NAM YNP G DVH+MA++L KIF+ KW
Sbjct: 143 DDVRLTFSNAMKYNPPGNDVHMMAKELSKIFDRKW 177
>gi|356557783|ref|XP_003547190.1| PREDICTED: transcription factor GTE8-like [Glycine max]
Length = 565
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 70/95 (73%)
Query: 375 CSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFA 434
C+ +L+ LM H + WVF+ PVD L + DYFTII HPMDLGT+K++L KN Y +EFA
Sbjct: 83 CATILKSLMSHTYSWVFSKPVDPIALSIPDYFTIISHPMDLGTIKSKLEKNIYSGTEEFA 142
Query: 435 EDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKW 469
DVRLTF NAM YNP DVH+MA++L KIF+ KW
Sbjct: 143 ADVRLTFSNAMKYNPPSNDVHLMAKELSKIFDRKW 177
>gi|42571057|ref|NP_973602.1| Transcription factor GTE6 [Arabidopsis thaliana]
gi|330253942|gb|AEC09036.1| Transcription factor GTE6 [Arabidopsis thaliana]
Length = 276
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/250 (32%), Positives = 127/250 (50%), Gaps = 18/250 (7%)
Query: 372 FKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPK 431
+ + + ++ +HK W F PVDVK LGLHDY+ +I PMDLGT+K ++ + Y + +
Sbjct: 1 MRQFATMFRQIAQHKWAWPFLEPVDVKGLGLHDYYKVIEKPMDLGTIKKKMESSEYSNVR 60
Query: 432 EFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEMGFH 491
E DVRL F NAM YN + +DV++MAE LL+ FE+KW++I + E + D E H
Sbjct: 61 EIYADVRLVFKNAMRYNEEKEDVYVMAESLLEKFEEKWLLIMPKLVEEEKKQVDEEAEKH 120
Query: 492 TPTSRKAPPLPPPLDMRRILDRSESITHPMDSRLKPISTTPSSRTPAPKKPKAKDPHKRD 551
+++ +M R L + +D +L+ + + R R
Sbjct: 121 --ANKQLTMEAAQAEMARDLSNE---LYEIDLQLEKLRESVVQRC-------------RK 162
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWELDRF 611
++ EK+ LS L L E L ++++ + N S E+E+DID TLW L F
Sbjct: 163 LSTQEKKGLSAALGRLSPEDLSKALKMVSESNPSFPAGAPEVELDIDVQTDVTLWRLKVF 222
Query: 612 VTNYKKSLSK 621
V K+ +K
Sbjct: 223 VQEALKAANK 232
>gi|302794995|ref|XP_002979261.1| hypothetical protein SELMODRAFT_418860 [Selaginella moellendorffii]
gi|300153029|gb|EFJ19669.1| hypothetical protein SELMODRAFT_418860 [Selaginella moellendorffii]
Length = 700
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 97/282 (34%), Positives = 145/282 (51%), Gaps = 40/282 (14%)
Query: 370 KIFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL---NKNW 426
+IF S +L ++ +HK W F PVDV+ L LHDY+ +I+ PMD T++ ++ + +
Sbjct: 177 RIF---SNILRQVTQHKWAWPFMQPVDVEGLQLHDYYDVIKRPMDFRTIREKMEAKDGSG 233
Query: 427 YKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKW-VVIESEYNRE--MRIG 483
Y+S +E AEDVRL F NAMTYN G DV++MA+ L + FE+K+ V+E + E R
Sbjct: 234 YRSVQEIAEDVRLVFSNAMTYNEVGTDVYVMAKTLSEKFEEKYKFVLEPKLLEEGAKRKQ 293
Query: 484 ADYEMGFHTPTS----------RKAPPLPPPLDMRRILDRSESI----THPMDSRLKPIS 529
E+ H R A + L+ + D E I T L S
Sbjct: 294 EMVELEVHEGEEAKAAEEVALDRMAHEICKKLN--NLEDELEEIKINATSKYRQMLDGFS 351
Query: 530 TTPSSRTPAPKKPKAKDPHKRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQH 589
+ R P M+ +EK++L +L LP L+ ++QII K N S
Sbjct: 352 SYSYLRVCRP------------MSIEEKRQLGQSLGRLPPTGLNRVIQIIAKNNPSFNAA 399
Query: 590 DDEIEVDIDSVDAETLWELDRFVTNYKKSLSKNKRKAELANQ 631
E+EVDID++D TLW+L +V + LS+NK++ E A+Q
Sbjct: 400 VAEVEVDIDALDTGTLWQLHCYV---QMVLSQNKQQVEGADQ 438
>gi|326502374|dbj|BAJ95250.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 315
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 81/203 (39%), Positives = 110/203 (54%), Gaps = 28/203 (13%)
Query: 272 KRGHSEVASVGVPVTRVGITRPSRPLNQLSISTVENSLGLSENVEKEKRTPKANQFYRNS 331
KR +E+ SV R + RP L+I V + G S + P+A + R S
Sbjct: 84 KRFRAELDSV-----RYLLKRP----EFLAIMPVSRAPGFSSSA-----APRAKKVQRGS 129
Query: 332 EFLL-AKDKFPPAESNKKSKLNGKKQAGNELAHGFGTGSKIFKSCSALLEKLMKHKHGWV 390
L AK +F P + + + L + I K C A+L+KLM K +
Sbjct: 130 HVLRGAKGRFLPTKP--------RPETSTVLPE-----ATILKQCEAILKKLMTQKFSHI 176
Query: 391 FNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPK 450
FN PVDV+ L + DY II+HPMDLGT+K +L+ Y SP +FA DVRLTF+NA+TYNP+
Sbjct: 177 FNVPVDVEKLNIPDYNEIIKHPMDLGTIKKKLDSGSYTSPSDFAADVRLTFNNAITYNPR 236
Query: 451 GQDVHIMAEQLLKIFEDKWVVIE 473
G VH MA QL K+FE +W +E
Sbjct: 237 GHAVHDMAIQLNKMFESRWKTVE 259
>gi|1588281|prf||2208296A RING3 protein
Length = 509
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 88/274 (32%), Positives = 131/274 (47%), Gaps = 57/274 (20%)
Query: 372 FKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
+ C+ +L++L+ KH W F PVD LGLHDY II+HPMDL TVK ++ Y+
Sbjct: 185 LEPCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 244
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEM 488
+EFA DVRL F N YNP DV MA +L +FE ++ + E
Sbjct: 245 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDE------------- 291
Query: 489 GFHTPTSRKAPPLPPPLDMRRILDRSESITHPMDSRLKPIS------------TTPSSRT 536
P +R + ++ +++ PIS ++T
Sbjct: 292 ---------------PEQLRAVHEQLAALSQ------GPISKPKRKREKKEKKKKRKAKT 330
Query: 537 PAPKKPKAKDPHKRD----MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-D 591
P P D + + M+YDEK++LS ++ LP EKL +V II+ R SL + +
Sbjct: 331 APPALPTGYDSEEEEESRPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREPSLRDSNPE 390
Query: 592 EIEVDIDSVDAETLWELDRFVTNYKKSLSKNKRK 625
EIE+D +++ TL EL+R+V + L K RK
Sbjct: 391 EIEIDFETLKPSTLRELERYVLS---CLRKKPRK 421
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 52/91 (57%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD LGL DY II+ PMD+GT+K RL N+Y + E +D
Sbjct: 39 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDF 98
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN D+ +MA+ L KIF K
Sbjct: 99 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 129
>gi|255557483|ref|XP_002519772.1| bromodomain-containing protein, putative [Ricinus communis]
gi|223541189|gb|EEF42745.1| bromodomain-containing protein, putative [Ricinus communis]
Length = 570
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/218 (35%), Positives = 116/218 (53%), Gaps = 20/218 (9%)
Query: 304 TVENSLGLSENVEKEKRTPKANQFYRNSEFLLAKDKFPPAESNKKS---KLNGKKQAGNE 360
+V+N+ ++ NVEK N + + K K + K+ + G++Q +
Sbjct: 25 SVKNACDMARNVEK-------NYHSQVCDIENMKQKLTECSAIKRGPSDMVEGQQQKKRK 77
Query: 361 LAHGFGTGSKIFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKT 420
+ G + C++L++ LM H GWVF PVD + L + DYF++I +PMDLGTVK+
Sbjct: 78 MDRG------VIHQCTSLVKSLMNHPCGWVFKEPVDPEKLEIPDYFSVITNPMDLGTVKS 131
Query: 421 RLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREM 480
+L N Y +EFA DVRLTF NA+ YNP VH MAE+L KIFE +W +E ++N ++
Sbjct: 132 KLENNQYFGAEEFAADVRLTFSNALLYNPPLNYVHKMAEKLKKIFETRWKALEEKWNYQI 191
Query: 481 RIGADYEMGFHTPT----SRKAPPLPPPLDMRRILDRS 514
D + P +R+ P PPL + RS
Sbjct: 192 AKDGDGKPFNARPKEVGDTRQKCPQTPPLHKAELPKRS 229
>gi|414588437|tpg|DAA39008.1| TPA: hypothetical protein ZEAMMB73_513409 [Zea mays]
Length = 577
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 57/119 (47%), Positives = 80/119 (67%), Gaps = 1/119 (0%)
Query: 369 SKIFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
S++ + C ++ KL+ HK GW+F PVD G+ DYF +IR PMDLGT+K +L K Y
Sbjct: 59 SRMIRLCGNIVRKLIDHKCGWLFKEPVDPDLYGIPDYFDVIRSPMDLGTIKNKLTKKKYV 118
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYE 487
S +EFA DVRLTF NAM YNP G DVHI A++L ++F+ +W +E ++ R +G D +
Sbjct: 119 SIEEFAADVRLTFSNAMKYNPPGNDVHIFAKELNEMFDSEWESVERKF-RGRNLGQDQQ 176
>gi|359496779|ref|XP_002264867.2| PREDICTED: LOW QUALITY PROTEIN: transcription factor GTE2-like
[Vitis vinifera]
Length = 499
Score = 129 bits (323), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 107/299 (35%), Positives = 155/299 (51%), Gaps = 61/299 (20%)
Query: 161 DQQPVVSHLDAASDDSSSLNRQQGGVVVAATTREAPSENGVVAVKSGDGRVKISLGSSTK 220
++ P S L ++DSSSLNR+ ++ R+ S+ G V +LG+ ++
Sbjct: 65 NEPPAASLLSPVANDSSSLNRK----AISLNDRKESSQGGYVT---------FNLGAYSR 111
Query: 221 REMREIRKKLEIELDTVRSLVKRIEAKEVQISGGVSNSGVLPVSDVVDNGIKRGHSEVAS 280
RE++E++K+L +ELD VR+L RIE+++ + + V P H +
Sbjct: 112 RELKELKKRLLLELDQVRNLRNRIESRDFE------SRSVYPAP----------HLSSSH 155
Query: 281 VGVPVTRVGITRPSRPLNQLSISTVENSLGLSENVEKEKRTPKANQFYRNSEFLLAKDKF 340
G R I+ P P L I +S G + + KEKRTPKANQ Y SEFL+ K+K
Sbjct: 156 GG----REAISTPRPP--PLQIKYALDSPGAAAS--KEKRTPKANQCYPPSEFLIGKNK- 206
Query: 341 PPAESNKKSKLNGKKQAGNELAHGFGTGSK------------------IFKSCSALLEKL 382
S K K++G K++ L G SK + + C +L KL
Sbjct: 207 --TVSPKSKKVSGSKRS---LPVASGRDSKRPMPEPEPEPLMDKLVSSMMRRCGQILTKL 261
Query: 383 MKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTF 441
MKHK GWVFN PVDV LGLHDY I++ PMDLG+VK++L + Y SP +FA D ++F
Sbjct: 262 MKHKFGWVFNKPVDVVGLGLHDYHKIVKQPMDLGSVKSKLERKVYLSPLDFASDREMSF 320
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 45/85 (52%), Positives = 64/85 (75%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWELD 609
R+M+++EK KL NL ++P EK++ +V II+KRN + Q D+IE+DI++VD ETLWELD
Sbjct: 316 REMSFEEKAKLGMNLXNVPPEKMEQLVAIIRKRNPHMAQDGDDIELDIEAVDIETLWELD 375
Query: 610 RFVTNYKKSLSKNKRKAELANQARA 634
RFV+NYKK SK +R+ + NQ A
Sbjct: 376 RFVSNYKKMESKIRRQGLIMNQTLA 400
>gi|302782720|ref|XP_002973133.1| hypothetical protein SELMODRAFT_413595 [Selaginella moellendorffii]
gi|300158886|gb|EFJ25507.1| hypothetical protein SELMODRAFT_413595 [Selaginella moellendorffii]
Length = 585
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 92/277 (33%), Positives = 136/277 (49%), Gaps = 39/277 (14%)
Query: 378 LLEKLMKH-KHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
+LE L + K GWVF PV L DY +I PMDLGTVK+R+ +Y SPK FA D
Sbjct: 213 VLEDLRNYSKEGWVFCQPVQSLWPELVDYTKVIEKPMDLGTVKSRVQSKYYSSPKGFARD 272
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEMGFHTPTSR 496
VRLTF NA+ +N G H +A ++ + FE + +E YNR + A ++ P
Sbjct: 273 VRLTFDNAIRFNAAGSMYHKLALKMRQKFETAFKAVERLYNRPPKPAAKSKI---RPLVE 329
Query: 497 KAPPLPPPLDMRRILDRSESIT---------HPMDSRLKPISTTPSSRT-----PAPKKP 542
AP PPP ++++ + P +K TP SR PAPK
Sbjct: 330 VAP--PPPRQKIEMVEQKPVVAPVVEVIDVKQPEVLEVKEQVATPVSRARDLEFPAPKAK 387
Query: 543 KAK----DPH------------KRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSL 586
K K +P R ++ EK KLS + S P +++ +++I+ +++ L
Sbjct: 388 KVKLMGTNPRLGRQANSLAYGGCRLLSAKEKAKLSELVDSFPEDRMRKVIEIVGEKHPEL 447
Query: 587 FQHDDEIEVDIDSVDAETLWELDRFVTNYKKSLSKNK 623
E+E+D+D +D TL+ L R N++K SKNK
Sbjct: 448 VGA-PEVELDLDKLDKNTLFNLYRLAMNWQK--SKNK 481
>gi|218188757|gb|EEC71184.1| hypothetical protein OsI_03067 [Oryza sativa Indica Group]
Length = 264
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/246 (33%), Positives = 110/246 (44%), Gaps = 72/246 (29%)
Query: 375 CSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFA 434
C LL+KL++H+ GWVF PVD + L L DY+ I PMDLGTV+ RL + Y P FA
Sbjct: 56 CGKLLDKLLEHEDGWVFAEPVDARALRLVDYYLRISDPMDLGTVRRRLERRCYADPWAFA 115
Query: 435 EDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEMGFHTPT 494
DVRLTF+NAM+YN G V+ A +L +IFE W P+
Sbjct: 116 ADVRLTFNNAMSYNSAGDPVYESAAELSEIFEAGW-----------------------PS 152
Query: 495 SRKAPPLPPPLDMRRILDRSESITHPMDSRLKPISTTPSSRTPAPKKPKAKDPHKRDMTY 554
APP PP D R
Sbjct: 153 VLAAPPRPP--DAER--------------------------------------------- 165
Query: 555 DEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWELDRFVTN 614
K++LS L LP + +I+KKR+ L + + +EVD+D D+ TL ELDR V
Sbjct: 166 --KRRLSGLLPRLPVGAQVTVAEIMKKRDGCLREVNGMMEVDLDRADSATLDELDRMVAE 223
Query: 615 YKKSLS 620
+ +L+
Sbjct: 224 HGAALA 229
>gi|444732332|gb|ELW72633.1| Bromodomain testis-specific protein [Tupaia chinensis]
Length = 556
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/249 (33%), Positives = 127/249 (51%), Gaps = 22/249 (8%)
Query: 372 FKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
+ C+ +L++++ KH W F PVDV LGLH+Y+ I+++PMDLGT+K +++ YK
Sbjct: 227 LRHCNEILKEMLAKKHLSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKRKMDNQEYK 286
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQL-LKIFEDKWVVIESEYNREMRIGADYE 487
EFA DVRL F N YNP +V MA L LK + V+ R+++ +
Sbjct: 287 DAYEFAADVRLMFMNCYKYNPPDHEVVSMARMLQLKAVHQQLQVLSQVPFRKLKKKNEKS 346
Query: 488 MGFHTP---TSRKAPPLPPPLDMRRILDRSESITHPMDSRLKPISTTPSSRTPAPKKPKA 544
T+R D M + KP S P R K+
Sbjct: 347 KREKKKAKVTNRD--------------DNPRKKAKQMKLKEKPQSNQPKKRKQQVFALKS 392
Query: 545 KDPHKRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAE 603
+ + + M YDEK+KLS ++ LP +KL +V II+ R SL + DEIE+D +++ A
Sbjct: 393 DEDNAKPMNYDEKRKLSLDINKLPGDKLGRVVHIIQSREPSLRNSNPDEIEIDFETLKAS 452
Query: 604 TLWELDRFV 612
TL EL+++V
Sbjct: 453 TLRELEKYV 461
>gi|328865269|gb|EGG13655.1| bromodomain-containing protein [Dictyostelium fasciculatum]
Length = 1155
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/260 (32%), Positives = 128/260 (49%), Gaps = 38/260 (14%)
Query: 353 GKKQAGNELAHGFGTGSKIFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHP 412
G+++ G + TG+ K C +LE L H+H + F APVD LG+ DYF +++HP
Sbjct: 437 GRRRVGPPTENSL-TGA--MKRCFDILETLSNHQHSYPFLAPVDPVALGILDYFDVVKHP 493
Query: 413 MDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVI 472
MD GT++ L Y+ +EFA D RL F NA YNP VHIMA L IFE K+ +
Sbjct: 494 MDFGTIRNLLLSGVYQEMEEFAIDCRLVFSNAKDYNPPNNPVHIMAITLEDIFERKYSKL 553
Query: 473 ESEYNREMRIGADYEMGFHTPTSRKAPPLPPPLDMRRILDRSESITHPMDSRLKPISTTP 532
++ N E E RI +E H M L+ +
Sbjct: 554 QNTPNLETAEEVSEE--------------------ERIKKLTEENKH-MQKELEKM---- 588
Query: 533 SSRTPAPKKPKAKDPHKRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDE 592
K +++ P + MT +EK +L TN+ LP E+L +++ I+ + Q DE
Sbjct: 589 --------KRESRKPKQPQMTLEEKTQLGTNISFLPPERLRDLISIVSHTLPNTAQ--DE 638
Query: 593 IEVDIDSVDAETLWELDRFV 612
I +D++ +D TL ++++FV
Sbjct: 639 IVIDLEKLDNSTLRKMEQFV 658
>gi|255580043|ref|XP_002530855.1| bromodomain-containing protein, putative [Ricinus communis]
gi|223529579|gb|EEF31529.1| bromodomain-containing protein, putative [Ricinus communis]
Length = 536
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 57/115 (49%), Positives = 76/115 (66%)
Query: 371 IFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSP 430
+ C++L++ LM H GWVF PVD L + DYF+II +PMDLGTVK++L N Y
Sbjct: 82 VIHQCASLVKSLMDHPCGWVFKEPVDPDKLHIPDYFSIITNPMDLGTVKSKLENNQYFES 141
Query: 431 KEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGAD 485
+EFA DVRLTF NA+ YN VH MAE+L KIFE +W +E ++N ++ G D
Sbjct: 142 EEFAADVRLTFSNALLYNTPPNYVHNMAEKLKKIFETRWKALEEKWNYQIPKGGD 196
>gi|357144539|ref|XP_003573328.1| PREDICTED: transcription factor GTE10-like [Brachypodium
distachyon]
Length = 777
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 90/299 (30%), Positives = 137/299 (45%), Gaps = 65/299 (21%)
Query: 371 IFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSP 430
+FK C LL LM+H++G F+ PVD L + DYF I++HPMDLGT++ +LN Y +P
Sbjct: 156 LFKKCQDLLRNLMRHRYGQTFSIPVDPVKLNIPDYFDIVKHPMDLGTIQKKLNSGSYPTP 215
Query: 431 KEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNR--------EMRI 482
EFA DVRLTF NA+ YNP VH MA+ + FE +W IE + R E I
Sbjct: 216 WEFAADVRLTFSNAILYNPHNNVVHQMAKTMSSHFEPRWKPIEKKLPRPEEEPSVVEPSI 275
Query: 483 ---------------------------GADYEMGFH----------TPTSRKAPPL---- 501
GA + F P RKA PL
Sbjct: 276 VEPSDKGAVEKNLIVNKVPSEKKPSNKGAYKKGSFQKEEAVANPVLQPKKRKASPLVQDA 335
Query: 502 --PPPLDMRRILDRSESITHPMDSRLKPISTTPSSRTPAPKKPKAKDPHKRDMTYDEKQK 559
P + M ++++ D+ + P P AP +P + MT +K
Sbjct: 336 PVAPEVQMVQVVE---------DAPVAPAVQVPQVAEDAPVRPTDME----MMTDKQKVD 382
Query: 560 LSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIE-VDIDSVDAETLWELDRFVTNYKK 617
LS LQS +++V+ I++ + D++ +D++++D TL+EL + + +Y +
Sbjct: 383 LSVRLQSYGGFIPEHVVEFIRRHLNDDNDADEDELTIDMNALDDPTLFELQKLLDDYDR 441
>gi|297791027|ref|XP_002863398.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297309233|gb|EFH39657.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 488
Score = 125 bits (314), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 53/98 (54%), Positives = 71/98 (72%)
Query: 375 CSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFA 434
C LL LM+H+ GW+F PVD L + DYF++IR PMDLGTVK++L KN Y + EFA
Sbjct: 66 CLVLLRFLMEHRVGWLFEEPVDPVKLEIPDYFSVIRKPMDLGTVKSKLLKNVYSNADEFA 125
Query: 435 EDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVI 472
DVRLTF NAM YNP G +VH +A+++ +IFE +W ++
Sbjct: 126 ADVRLTFANAMRYNPPGNEVHTIAKEIKEIFEVRWKLL 163
>gi|357134548|ref|XP_003568879.1| PREDICTED: transcription factor GTE8-like, partial [Brachypodium
distachyon]
Length = 574
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 56/104 (53%), Positives = 70/104 (67%)
Query: 373 KSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKE 432
+ C +LEKLM H GW+F+ PVD G+ DYF +IR+PMDLGTVK +L Y S E
Sbjct: 64 RQCKNVLEKLMGHTGGWLFHEPVDPVLFGIPDYFDVIRNPMDLGTVKKKLTNKNYPSTDE 123
Query: 433 FAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEY 476
FA DVRLTF NAM YNP G VH +AEQL IF+ +W + E ++
Sbjct: 124 FAADVRLTFSNAMKYNPPGNFVHTVAEQLNGIFDSEWKLYERKW 167
>gi|413925460|gb|AFW65392.1| hypothetical protein ZEAMMB73_923875 [Zea mays]
Length = 613
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 54/108 (50%), Positives = 73/108 (67%)
Query: 369 SKIFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
S++ + C ++ KL+ HK GW+F PVD + DYF +IR+PMDLGTVK +L K Y
Sbjct: 60 SRMIRLCGNIVRKLIDHKGGWLFKDPVDPDLYKIPDYFDVIRNPMDLGTVKNKLTKKKYV 119
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEY 476
S +EFA DVRLTF NAM YNP G DVH A +L +IF+ +W +E ++
Sbjct: 120 SIEEFAADVRLTFSNAMKYNPPGNDVHAFARELNEIFDSEWESVERKF 167
>gi|125560007|gb|EAZ05455.1| hypothetical protein OsI_27669 [Oryza sativa Indica Group]
Length = 791
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 55/105 (52%), Positives = 71/105 (67%)
Query: 369 SKIFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
++ FK C LL+ L KH+ F APVDV L + DYF II+ PMDLGT++ +LN Y
Sbjct: 160 AEAFKQCGNLLKNLFKHQWAGPFLAPVDVVQLNIPDYFDIIKKPMDLGTIEKKLNAGMYS 219
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIE 473
+P +FA DVRLTF NA+TYNP G DV++M + L IFE +W IE
Sbjct: 220 TPWDFAADVRLTFDNAVTYNPVGNDVNLMGKTLKCIFETRWKFIE 264
>gi|42407711|dbj|BAD08859.1| putative bromodomain-containing protein [Oryza sativa Japonica
Group]
gi|125602058|gb|EAZ41383.1| hypothetical protein OsJ_25901 [Oryza sativa Japonica Group]
Length = 791
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 55/105 (52%), Positives = 71/105 (67%)
Query: 369 SKIFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
++ FK C LL+ L KH+ F APVDV L + DYF II+ PMDLGT++ +LN Y
Sbjct: 160 AEAFKQCGNLLKNLFKHQWAGPFLAPVDVVQLNIPDYFDIIKKPMDLGTIEKKLNAGMYS 219
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIE 473
+P +FA DVRLTF NA+TYNP G DV++M + L IFE +W IE
Sbjct: 220 TPWDFAADVRLTFDNAVTYNPVGNDVNLMGKTLKCIFETRWKFIE 264
>gi|413941779|gb|AFW74428.1| hypothetical protein ZEAMMB73_413666 [Zea mays]
Length = 757
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 52/102 (50%), Positives = 68/102 (66%)
Query: 372 FKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPK 431
FK C+ LL+ +M H F PVD+ L + DYF I++ PMDLGT++ +L Y +P+
Sbjct: 170 FKQCANLLKSIMSHVWAGPFLVPVDIVKLNIPDYFQIVKQPMDLGTIQKKLKAGMYSTPR 229
Query: 432 EFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIE 473
EFA DVRLTF NAM YNP DVH+MA+ L K FE +W +IE
Sbjct: 230 EFAADVRLTFSNAMNYNPVNNDVHLMAKTLSKNFETRWKLIE 271
Score = 47.0 bits (110), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 42/69 (60%)
Query: 549 KRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWEL 608
KR MT ++K +S LQS + D++V+ I+ R ++E+E+DID + +TL+EL
Sbjct: 360 KRMMTSEQKYDISARLQSFGAFIPDHVVEFIRSRVDDCDADEEEMELDIDVLGDDTLFEL 419
Query: 609 DRFVTNYKK 617
+ + +Y +
Sbjct: 420 QQLLDDYDR 428
>gi|159475920|ref|XP_001696062.1| Ring3 protein [Chlamydomonas reinhardtii]
gi|158275233|gb|EDP01011.1| Ring3 protein [Chlamydomonas reinhardtii]
Length = 798
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/243 (33%), Positives = 117/243 (48%), Gaps = 31/243 (12%)
Query: 371 IFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSP 430
I++ C + ++ L+K K+ VF PVD G+ DY I HPMDLGT+K +L + Y P
Sbjct: 94 IWRLCGSTVDYLLKKKNAQVFGRPVDPVRDGVPDYLKFILHPMDLGTIKAKLRERRYNDP 153
Query: 431 KEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEMGF 490
+EFA D+RL + N TYN G V +QL FE KW ++YN E R D M
Sbjct: 154 REFAADMRLVWSNCRTYNQIGTSVRQWGDQLSDDFERKW----ADYNCEQRW--DDLMAT 207
Query: 491 HTPTSRKAPPLPPPLDMRRILDRSESITHPMDSRLKPISTTPSSRTPAPKKPKAKDPHKR 550
P + LD RRI + + ++S P+ R
Sbjct: 208 RDPQNVS-------LD-RRIASSARQLLQRVNSVQLMQEADPT----------------R 243
Query: 551 DMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDD-EIEVDIDSVDAETLWELD 609
MT EK+KLS L L ++L +++ II + + DD EIE+D+D +D TLW L
Sbjct: 244 AMTSVEKRKLSIALSELQGDQLADVLNIIAENLKDVNPDDDEEIELDVDQLDNTTLWRLR 303
Query: 610 RFV 612
+
Sbjct: 304 EYC 306
>gi|326492620|dbj|BAJ90166.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 540
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 67/102 (65%)
Query: 375 CSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFA 434
C +L KLM H GW+F+ PVD G+ DYF +IR+PMDLGTVK +L Y S +FA
Sbjct: 84 CRNILGKLMDHPGGWLFHKPVDPDLFGIPDYFDVIRNPMDLGTVKKKLTNKSYLSTDDFA 143
Query: 435 EDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEY 476
DVRLTF NAMTYNP G VH +AEQL +F +W E ++
Sbjct: 144 ADVRLTFSNAMTYNPPGNQVHTVAEQLNIMFNSEWTSYERKW 185
>gi|19171209|emb|CAD13175.1| viroid RNA-binding protein [Solanum lycopersicum]
Length = 313
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 63/118 (53%), Positives = 79/118 (66%), Gaps = 14/118 (11%)
Query: 527 PISTTPSSRTPAPK--------------KPKAKDPHKRDMTYDEKQKLSTNLQSLPSEKL 572
P+ST R PA K KP+AKDP+KR+M +EK KL LQSLP EK+
Sbjct: 81 PLSTPSPVRAPAAKPQSAAKVPTMGKQPKPRAKDPNKREMNMEEKHKLGVGLQSLPQEKM 140
Query: 573 DNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWELDRFVTNYKKSLSKNKRKAELAN 630
+VQII+KRN L Q DEIE+DI+++D ETLWELDRFVTN+KK +SK KR+A + N
Sbjct: 141 PQLVQIIRKRNEHLAQDGDEIELDIEALDTETLWELDRFVTNWKKMVSKTKRQALMNN 198
>gi|300121324|emb|CBK21704.2| unnamed protein product [Blastocystis hominis]
Length = 304
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 91/278 (32%), Positives = 137/278 (49%), Gaps = 31/278 (11%)
Query: 375 CSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFA 434
C+ L+KLM HK F PVD LGL DYF +++HPMD T+ +++ + +S EFA
Sbjct: 4 CAKSLKKLMMHKWAGPFLHPVDPVALGLSDYFDVVKHPMDFSTILSQIENHELRSKDEFA 63
Query: 435 EDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEM-GFHTP 493
V L F NA+ YN KG DVHIMA +L +F + I + G D + ++ P
Sbjct: 64 SKVNLVFDNALLYNSKGSDVHIMASELQSLFAKEMETITGQI---FAAGPDAQAPTYYVP 120
Query: 494 TSRKAPPLP--PPLDMR--------------RILDRSESITHPMDSRLKPISTTPSSRTP 537
+ R+ PLP PP R R+ + E M SR++ + S T
Sbjct: 121 SRRERAPLPDIPPKLPRVSESRPAKSSAEKARLAQKEE--MEMMKSRIQQLEGELSRMTQ 178
Query: 538 AP-----KKPKAKDPHKRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDE 592
K KA D R MT +EK+ LS + L L+ +V+I+ + + ++
Sbjct: 179 EVNERQGKGEKALD--ARPMTMEEKKALSMEINQLKGSDLEEVVRIVWGQMAGEQMQQND 236
Query: 593 IEVDIDSVDAETLWELDRFVTNYK--KSLSKNKRKAEL 628
IE+D+ ++ ETL +L+R++ K K K +RKA L
Sbjct: 237 IELDLSAMPNETLRKLERYIVQCKEAKKAPKRQRKAHL 274
>gi|242070257|ref|XP_002450405.1| hypothetical protein SORBIDRAFT_05g004810 [Sorghum bicolor]
gi|241936248|gb|EES09393.1| hypothetical protein SORBIDRAFT_05g004810 [Sorghum bicolor]
Length = 605
Score = 122 bits (306), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 53/108 (49%), Positives = 73/108 (67%)
Query: 369 SKIFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
S++ + C ++ KL+ HK GW+F PVD G+ DYF +I +PMDLGTVK +L K Y
Sbjct: 60 SRMIRLCGNIVRKLIDHKGGWLFKEPVDPVLYGIPDYFDVIHNPMDLGTVKNKLTKKQYV 119
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEY 476
S +EFA DVRLTF NAM YNP DVH +A++L IF+ +W +E ++
Sbjct: 120 SIEEFAADVRLTFSNAMKYNPPENDVHKVAKELNGIFDSEWESVERKF 167
>gi|14164429|dbj|BAB55682.1| P0047B08.5 [Oryza sativa Japonica Group]
Length = 370
Score = 122 bits (305), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 82/246 (33%), Positives = 110/246 (44%), Gaps = 72/246 (29%)
Query: 375 CSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFA 434
C LL+KL++H+ GWVF PVD + L L DY+ I PMDLGTV+ RL + Y P FA
Sbjct: 181 CGKLLDKLLEHEDGWVFAEPVDARALRLVDYYLRISDPMDLGTVRRRLERRRYADPWAFA 240
Query: 435 EDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEMGFHTPT 494
DVRLTF+NAM+YN G V+ A +L +IFE W P+
Sbjct: 241 ADVRLTFNNAMSYNSAGDPVYESAAELSEIFEAGW-----------------------PS 277
Query: 495 SRKAPPLPPPLDMRRILDRSESITHPMDSRLKPISTTPSSRTPAPKKPKAKDPHKRDMTY 554
APP PP D R
Sbjct: 278 VLAAPPRPP--DAER--------------------------------------------- 290
Query: 555 DEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWELDRFVTN 614
K++LS L LP + +I+KKR+ L + + +EVD+D D+ TL ELDR V
Sbjct: 291 --KRRLSGLLPRLPVGAQVTVAEIMKKRDGCLREVNGMMEVDLDRADSATLDELDRMVAE 348
Query: 615 YKKSLS 620
+ +L+
Sbjct: 349 HGAALA 354
>gi|326494522|dbj|BAJ94380.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 274
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 67/102 (65%)
Query: 375 CSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFA 434
C +L KLM H GW+F+ PVD G+ DYF +IR+PMDLGTVK +L Y S +FA
Sbjct: 84 CRNILGKLMDHPGGWLFHKPVDPDLFGIPDYFDVIRNPMDLGTVKKKLTNKSYLSTDDFA 143
Query: 435 EDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEY 476
DVRLTF NAMTYNP G VH +AEQL +F +W E ++
Sbjct: 144 ADVRLTFSNAMTYNPPGNQVHTVAEQLNIMFNSEWTSYERKW 185
>gi|224098028|ref|XP_002311109.1| global transcription factor group [Populus trichocarpa]
gi|222850929|gb|EEE88476.1| global transcription factor group [Populus trichocarpa]
Length = 370
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/267 (30%), Positives = 120/267 (44%), Gaps = 47/267 (17%)
Query: 359 NELAHGFGTGSKIFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTV 418
EL FGT +L ++ +HK W F PVDVK LGLHDY+ +I PMD T+
Sbjct: 88 QELMRQFGT----------ILRQITQHKWAWPFMQPVDVKGLGLHDYYEVIDKPMDFSTI 137
Query: 419 KTRL---NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVI--- 472
K ++ + YKS +E DVRL F NAM YN + DVH+MA+ LL FE+KW+
Sbjct: 138 KNQMEAKDGTGYKSVREICADVRLVFKNAMKYNDERSDVHVMAKTLLGKFEEKWLQFLPK 197
Query: 473 -----ESEYNREMRIGADYEMGFHTPTSRKAPPLPPPLDMRRILDRSESITHPMDSRLKP 527
+ E D ++ ++ A L L + +D L+
Sbjct: 198 VTEEEKRREEEEAEAQLDMQLAQEAAHAKMARDLGNEL-------------YEVDMHLEE 244
Query: 528 ISTTPSSRTPAPKKPKAKDPHKRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLF 587
+ + R M+ +EK+KL L L E L ++I+ + N
Sbjct: 245 LREMVVQKC-------------RKMSTEEKRKLGAALTRLSPEDLTKALEIVAQNNPGFQ 291
Query: 588 QHDDEIEVDIDSVDAETLWELDRFVTN 614
+E+++DID+ TLW L FV +
Sbjct: 292 ATAEEVDLDIDAQSETTLWRLKFFVKD 318
>gi|296086052|emb|CBI31493.3| unnamed protein product [Vitis vinifera]
Length = 362
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/304 (28%), Positives = 135/304 (44%), Gaps = 44/304 (14%)
Query: 318 EKRTPKANQFYRNSEFLLAKDKFPPAESNKKSKLNGKKQAGNELAHGFGTGSKIFKSCSA 377
E+R + QFY + K +LN K A A ++ +
Sbjct: 41 EQRVNEVEQFYLTAS---------------KKQLNVSKDASRREAAAAKRMQELMRQFGT 85
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN---WYKSPKEFA 434
+L ++ +HK W F PVDV+ LGLHDY+ +I PMD T+K ++ YK+ +E
Sbjct: 86 ILRQITQHKWAWPFMQPVDVEGLGLHDYYEVIEKPMDFSTIKNKMEAKDGAGYKNVREIC 145
Query: 435 EDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVV----IESEYNREMRIGADYEMGF 490
DVRL F NAM YN + +DVH+MA+ LL FE+KW+ + E R A+ ++
Sbjct: 146 ADVRLVFKNAMKYNDERRDVHVMAKTLLGKFEEKWLQLLPKVAEEDKRREEEEAEAQLDM 205
Query: 491 HTPTSRKAPPLPPPLDMRRILDRSESITHPMDSRLKPISTTPSSRTPAPKKPKAKDPHKR 550
H + R I + I +D ++ I +T
Sbjct: 206 HLAQEAAHAKMA-----RDISNELFEIDMHLDD-IREIIVQKCRKT-------------- 245
Query: 551 DMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWELDR 610
+ +EK+KL L L +E L ++I+ + N S +E+ +DID+ TLW L
Sbjct: 246 --STEEKRKLGAALSRLSAEDLSKALEIVAQSNPSFQATAEEVHLDIDAQRESTLWRLKF 303
Query: 611 FVTN 614
FV +
Sbjct: 304 FVKD 307
>gi|359486529|ref|XP_002276963.2| PREDICTED: transcription factor GTE1-like [Vitis vinifera]
Length = 440
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 122/263 (46%), Gaps = 39/263 (14%)
Query: 359 NELAHGFGTGSKIFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTV 418
EL FGT +L ++ +HK W F PVDV+ LGLHDY+ +I PMD T+
Sbjct: 155 QELMRQFGT----------ILRQITQHKWAWPFMQPVDVEGLGLHDYYEVIEKPMDFSTI 204
Query: 419 KTRLNKN---WYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVV---- 471
K ++ YK+ +E DVRL F NAM YN + +DVH+MA+ LL FE+KW+
Sbjct: 205 KNKMEAKDGAGYKNVREICADVRLVFKNAMKYNDERRDVHVMAKTLLGKFEEKWLQLLPK 264
Query: 472 IESEYNREMRIGADYEMGFHTPTSRKAPPLPPPLDMRRILDRSESITHPMDSRLKPISTT 531
+ E R A+ ++ H + R I + I +D ++ I
Sbjct: 265 VAEEDKRREEEEAEAQLDMHLAQEAAHAKMA-----RDISNELFEIDMHLDD-IREIIVQ 318
Query: 532 PSSRTPAPKKPKAKDPHKRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDD 591
+T + +EK+KL L L +E L ++I+ + N S +
Sbjct: 319 KCRKT----------------STEEKRKLGAALSRLSAEDLSKALEIVAQSNPSFQATAE 362
Query: 592 EIEVDIDSVDAETLWELDRFVTN 614
E+ +DID+ TLW L FV +
Sbjct: 363 EVHLDIDAQRESTLWRLKFFVKD 385
>gi|222618950|gb|EEE55082.1| hypothetical protein OsJ_02819 [Oryza sativa Japonica Group]
Length = 264
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 82/246 (33%), Positives = 110/246 (44%), Gaps = 72/246 (29%)
Query: 375 CSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFA 434
C LL+KL++H+ GWVF PVD + L L DY+ I PMDLGTV+ RL + Y P FA
Sbjct: 56 CGKLLDKLLEHEDGWVFAEPVDARALRLVDYYLRISDPMDLGTVRRRLERRRYADPWAFA 115
Query: 435 EDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEMGFHTPT 494
DVRLTF+NAM+YN G V+ A +L +IFE W P+
Sbjct: 116 ADVRLTFNNAMSYNSAGDPVYESAAELSEIFEAGW-----------------------PS 152
Query: 495 SRKAPPLPPPLDMRRILDRSESITHPMDSRLKPISTTPSSRTPAPKKPKAKDPHKRDMTY 554
APP PP D R
Sbjct: 153 VLAAPPRPP--DAER--------------------------------------------- 165
Query: 555 DEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWELDRFVTN 614
K++LS L LP + +I+KKR+ L + + +EVD+D D+ TL ELDR V
Sbjct: 166 --KRRLSGLLPRLPVGAQVTVAEIMKKRDGCLREVNGMMEVDLDRADSATLDELDRMVAE 223
Query: 615 YKKSLS 620
+ +L+
Sbjct: 224 HGAALA 229
>gi|147779795|emb|CAN62295.1| hypothetical protein VITISV_019973 [Vitis vinifera]
Length = 377
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 139/304 (45%), Gaps = 55/304 (18%)
Query: 328 YRNSEFLLAKDKFPPAESNKKSKLNGKKQAG------NELAHGFGTGSKIFKSCSALLEK 381
Y+ S L KDK S KK + + ++ EL FGT +L +
Sbjct: 62 YKGSSVL--KDKERHVASAKKQQQDASRREAAAAKRMQELMRQFGT----------ILRQ 109
Query: 382 LMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL---NKNWYKSPKEFAEDVR 438
+M+HK F PVDV+ LGLHDY+ +I PMD T+K ++ + YK+ +E DVR
Sbjct: 110 IMQHKWAGPFLHPVDVEGLGLHDYYEVIDKPMDFSTIKNQMEAKDGTGYKNVREICADVR 169
Query: 439 LTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVI--------ESEYNREMRIGADYEMGF 490
L F NAM YN + DVH+MA+ LL FE+KW+ + + E D ++
Sbjct: 170 LVFKNAMKYNDERHDVHVMAKTLLGKFEEKWLQLLPKVAEEEKRREEEEAEAQLDMQLAQ 229
Query: 491 HTPTSRKAPPLPPPLDMRRILDRSESITHPMDSRLKPISTTPSSRTPAPKKPKAKDPHKR 550
++ A + L + +D L+ + R +K R
Sbjct: 230 EAAHAKMAREISNEL-------------YXIDMHLEEV------REMVIRKC-------R 263
Query: 551 DMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWELDR 610
M+ +EK+KL L L +E L ++I+ + N S +E+++DID+ TLW L
Sbjct: 264 KMSTEEKRKLGAALSRLSAEDLSKALEIVAQNNPSFQATAEEVDLDIDAQTESTLWRLKF 323
Query: 611 FVTN 614
FV +
Sbjct: 324 FVKD 327
>gi|357517357|ref|XP_003628967.1| Global transcription factor group [Medicago truncatula]
gi|355522989|gb|AET03443.1| Global transcription factor group [Medicago truncatula]
Length = 365
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 121/254 (47%), Gaps = 37/254 (14%)
Query: 370 KIFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL---NKNW 426
++ + S +L ++ +HK W F PVDV+ LGLHDY+ II PMD GT+K ++ +
Sbjct: 92 ELMRQFSTILRQITQHKWAWPFLEPVDVEGLGLHDYYEIIDKPMDFGTIKNKMEAKDGTG 151
Query: 427 YKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVI--------ESEYNR 478
YK+ +E DVRL F NAM YN + DVH+MA+ L++ FEDKW+++ + +
Sbjct: 152 YKNVREIYADVRLIFKNAMKYNNEKHDVHVMAKTLMEKFEDKWLLLLPKVAEEEKRQIEE 211
Query: 479 EMRIGADYEMGFHTPTSRKAPPLPPPLDMRRILDRSESITHPMDSRLKPISTTPSSRTPA 538
E ++ D + T + A L L+ E M+ R K I
Sbjct: 212 EAQVQMDIHLAQETTYADMAKDLSNELN--------EVGIRLMEFREKVIQNC------- 256
Query: 539 PKKPKAKDPHKRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDID 598
R ++ EK+ L + L E L + ++ + N S DE+ +DI+
Sbjct: 257 -----------RKLSTGEKKALGKAIAKLSPENLQRALDLVAEINPSFESTADEVVLDIN 305
Query: 599 SVDAETLWELDRFV 612
+ T+W L FV
Sbjct: 306 AQSDYTVWRLYHFV 319
>gi|359484096|ref|XP_003633062.1| PREDICTED: transcription factor GTE1-like [Vitis vinifera]
Length = 377
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 139/304 (45%), Gaps = 55/304 (18%)
Query: 328 YRNSEFLLAKDKFPPAESNKKSKLNGKKQAG------NELAHGFGTGSKIFKSCSALLEK 381
Y+ S L KDK S KK + + ++ EL FGT +L +
Sbjct: 62 YKGSSVL--KDKERHVASAKKQQQDASRREAAAVKRMQELMRQFGT----------ILRQ 109
Query: 382 LMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL---NKNWYKSPKEFAEDVR 438
+M+HK F PVDV+ LGLHDY+ +I PMD T+K ++ + YK+ +E DVR
Sbjct: 110 IMQHKWAGPFLHPVDVEGLGLHDYYEVIDKPMDFSTIKNQMEAKDGTGYKNVREICADVR 169
Query: 439 LTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVI--------ESEYNREMRIGADYEMGF 490
L F NAM YN + DVH+MA+ LL FE+KW+ + + E D ++
Sbjct: 170 LVFKNAMKYNDERHDVHVMAKTLLGKFEEKWLQLLPKVAEEEKRREEEEAEAQLDMQLAQ 229
Query: 491 HTPTSRKAPPLPPPLDMRRILDRSESITHPMDSRLKPISTTPSSRTPAPKKPKAKDPHKR 550
++ A + L + +D L+ + R +K R
Sbjct: 230 EAAHAKMAREISNEL-------------YDIDMHLEEV------REMVIRKC-------R 263
Query: 551 DMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWELDR 610
M+ +EK+KL L L +E L ++I+ + N S +E+++DID+ TLW L
Sbjct: 264 KMSTEEKRKLGAALSRLSAEDLSKALEIVAQNNPSFQATAEEVDLDIDAQTESTLWRLKF 323
Query: 611 FVTN 614
FV +
Sbjct: 324 FVKD 327
>gi|356526669|ref|XP_003531939.1| PREDICTED: transcription factor GTE1-like [Glycine max]
Length = 367
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/321 (28%), Positives = 150/321 (46%), Gaps = 59/321 (18%)
Query: 318 EKRTPKANQFYRNSEFL---------LAKDKFPPAESNKKSKLNGKKQAGNELAHGFGTG 368
EK+ + QFY +++ + LAK+K ++ + G K+ + +H +
Sbjct: 30 EKQVTEVEQFYESTDNVQGNNSKGGSLAKEK------GREKHITGTKKPLQDASHTEASS 83
Query: 369 SK----IFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL-- 422
+K + + S +L ++ +HK W F PVDV+ LGLHDY+ II PMD GT+K+++
Sbjct: 84 AKRMQELMRQFSTILRQITQHKWAWPFMDPVDVEGLGLHDYYEIIDKPMDFGTIKSKMEA 143
Query: 423 -NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVI--------E 473
+ Y + +E DVRL F NAM YN + DVH+MA+ LL+ FE+KW+ + +
Sbjct: 144 KDGTGYNNVREIYADVRLIFKNAMKYNNEKNDVHVMAKTLLEKFEEKWLQLLPKVAEEEK 203
Query: 474 SEYNREMRIGADYEMGFHTPTSRKAPPLPPPLDMRRILDRSESITHPMDSRLKPISTTPS 533
+ E + D ++ T + KA + L +D LK +
Sbjct: 204 RQLEEEAQAQLDIQLALETTYANKAKDISTEL-------------CEIDMHLKSLKEMVI 250
Query: 534 SRTPAPKKPKAKDPHKRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQ--HDD 591
+ R ++ EK+ L + L L E L + II + N +FQ +
Sbjct: 251 QQC-------------RKLSTQEKKMLMSALGKLSLENLYRALDIIAETN-PMFQPSSTE 296
Query: 592 EIEVDIDSVDAETLWELDRFV 612
++ +D+D+ TLW L FV
Sbjct: 297 DVVLDLDAQSDYTLWRLKAFV 317
>gi|30694987|ref|NP_199467.2| DNA-binding bromodomain-containing protein [Arabidopsis thaliana]
gi|327488241|sp|Q9LS28.2|GTE12_ARATH RecName: Full=Transcription factor GTE12; AltName:
Full=Bromodomain-containing protein GTE12; AltName:
Full=Protein GLOBAL TRANSCRIPTION FACTOR GROUP E12
gi|26451383|dbj|BAC42791.1| unknown protein [Arabidopsis thaliana]
gi|332008014|gb|AED95397.1| DNA-binding bromodomain-containing protein [Arabidopsis thaliana]
Length = 494
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 68/95 (71%)
Query: 375 CSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFA 434
C ALL LM+H+ GW+F PVD + + DYF +I+ PMDLGTVK++L KN Y + EFA
Sbjct: 73 CLALLRFLMEHRGGWLFKEPVDPVKMEIPDYFNVIQKPMDLGTVKSKLLKNVYSNADEFA 132
Query: 435 EDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKW 469
DVRLTF NAM YNP +VH +A+++ +IFE +W
Sbjct: 133 ADVRLTFANAMHYNPLWNEVHTIAKEINEIFEVRW 167
>gi|255577689|ref|XP_002529721.1| bromodomain-containing protein, putative [Ricinus communis]
gi|223530823|gb|EEF32687.1| bromodomain-containing protein, putative [Ricinus communis]
Length = 391
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/266 (29%), Positives = 121/266 (45%), Gaps = 47/266 (17%)
Query: 360 ELAHGFGTGSKIFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVK 419
EL FGT +L ++ +HK W F PVDVK LGLHDY+ +I PMD T+K
Sbjct: 107 ELMRQFGT----------ILRQITQHKWAWPFMQPVDVKGLGLHDYYEVIDKPMDFSTIK 156
Query: 420 TRL---NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVI---- 472
++ + YK+ +E DVRL F NAM YN + DVH+MA+ LL FE+KW+ +
Sbjct: 157 NQMETKDGTGYKNVREICADVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKV 216
Query: 473 ----ESEYNREMRIGADYEMGFHTPTSRKAPPLPPPLDMRRILDRSESITHPMDSRLKPI 528
+ E D ++ ++ A L L + +D+ L +
Sbjct: 217 TEEEKRREMEEAEAQLDMQLAQEAVHAKMARELSNEL-------------YEIDTHLDEL 263
Query: 529 STTPSSRTPAPKKPKAKDPHKRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQ 588
+ R ++ +EK+KL L L E L ++I+ + N
Sbjct: 264 RDMVVQKC-------------RKISTEEKRKLGAALTRLSPEDLTKALEIVAQNNPGFQA 310
Query: 589 HDDEIEVDIDSVDAETLWELDRFVTN 614
+E+++DID+ TLW L FV +
Sbjct: 311 TAEEVDLDIDAQTESTLWRLKFFVKD 336
>gi|302813758|ref|XP_002988564.1| hypothetical protein SELMODRAFT_159527 [Selaginella moellendorffii]
gi|300143671|gb|EFJ10360.1| hypothetical protein SELMODRAFT_159527 [Selaginella moellendorffii]
Length = 293
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/238 (33%), Positives = 135/238 (56%), Gaps = 21/238 (8%)
Query: 370 KIFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL---NKNW 426
+IF S +L ++ +HK W F PVDV+ L LHDY+ +I+ PMD T++ ++ + +
Sbjct: 68 RIF---SNILRQVTQHKWAWPFMQPVDVEGLQLHDYYDVIKRPMDFRTIREKMEAKDGSG 124
Query: 427 YKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKW-VVIESEY--NREMRIG 483
Y+S +E AEDVRL F NAMTYN G DV++MA+ L + FE+K+ V+E + R++R+
Sbjct: 125 YRSVQEIAEDVRLVFSNAMTYNEVGTDVYVMAKTLSEKFEEKYKFVLEPKLLEERKLRL- 183
Query: 484 ADYEMGFHTPTSRKAPPLPPPLDMRRILDRSESITHPMDSRLKPISTTPSSRTPAPKKPK 543
+G+ T ++++ + L+RS+ + ++ L+ I + +S+
Sbjct: 184 ----IGWLTRSAKRYTSCEARVPSH--LERSQ--LNNLEDELEEIKISATSKYRQMLDGF 235
Query: 544 AKDPH---KRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDID 598
+ + R M+ +EK++L +L LP L+ ++QII K N S E+EVDID
Sbjct: 236 SSYSYLRVCRPMSIEEKRQLGQSLGRLPPTGLNRVIQIIAKNNPSFNAAVAEVEVDID 293
>gi|255641563|gb|ACU21055.1| unknown [Glycine max]
Length = 363
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/321 (28%), Positives = 150/321 (46%), Gaps = 59/321 (18%)
Query: 318 EKRTPKANQFYRNSEFL---------LAKDKFPPAESNKKSKLNGKKQAGNELAHGFGTG 368
EK+ + QFY +++ + LAK+K ++ + G K+ + +H +
Sbjct: 30 EKQVTEVEQFYESTDNVQGNNSKGGSLAKEK------GREKHITGTKKPLQDASHTEASS 83
Query: 369 SK----IFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL-- 422
+K + + S +L ++ +HK W F PVDV+ LGLHDY+ II PMD GT+K+++
Sbjct: 84 AKRMQELMRQFSTILRQITQHKWAWPFMDPVDVEGLGLHDYYEIIDKPMDFGTIKSKMEA 143
Query: 423 -NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVI--------E 473
+ Y + +E DVRL F NAM YN + DVH+MA+ LL+ FE+KW+ + +
Sbjct: 144 KDGTGYNNVREIYADVRLIFKNAMKYNNEKNDVHVMAKTLLEKFEEKWLQLLPKVAEEEK 203
Query: 474 SEYNREMRIGADYEMGFHTPTSRKAPPLPPPLDMRRILDRSESITHPMDSRLKPISTTPS 533
+ E + D ++ T + KA + L +D LK +
Sbjct: 204 RQLEEEAQAQLDIQLALETTYANKAKDISTEL-------------CEIDMHLKSLKEMVI 250
Query: 534 SRTPAPKKPKAKDPHKRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQ--HDD 591
+ R ++ EK+ L + L L E L + II + N +FQ +
Sbjct: 251 QQC-------------RKLSTQEKKMLMSALGKLSLENLYRALDIIAETN-PMFQPSSTE 296
Query: 592 EIEVDIDSVDAETLWELDRFV 612
++ +D+D+ TLW L FV
Sbjct: 297 DVVLDLDAQSDYTLWRLKAFV 317
>gi|8885596|dbj|BAA97526.1| unnamed protein product [Arabidopsis thaliana]
Length = 506
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 68/95 (71%)
Query: 375 CSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFA 434
C ALL LM+H+ GW+F PVD + + DYF +I+ PMDLGTVK++L KN Y + EFA
Sbjct: 85 CLALLRFLMEHRGGWLFKEPVDPVKMEIPDYFNVIQKPMDLGTVKSKLLKNVYSNADEFA 144
Query: 435 EDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKW 469
DVRLTF NAM YNP +VH +A+++ +IFE +W
Sbjct: 145 ADVRLTFANAMHYNPLWNEVHTIAKEINEIFEVRW 179
>gi|297742702|emb|CBI35336.3| unnamed protein product [Vitis vinifera]
Length = 421
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/304 (28%), Positives = 137/304 (45%), Gaps = 55/304 (18%)
Query: 328 YRNSEFLLAKDKFPPAESNKKSKLNGKKQAG------NELAHGFGTGSKIFKSCSALLEK 381
Y+ S L KDK S KK + + ++ EL FGT +L +
Sbjct: 106 YKGSSVL--KDKERHVASAKKQQQDASRREAAAVKRMQELMRQFGT----------ILRQ 153
Query: 382 LMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL---NKNWYKSPKEFAEDVR 438
+M+HK F PVDV+ LGLHDY+ +I PMD T+K ++ + YK+ +E DVR
Sbjct: 154 IMQHKWAGPFLHPVDVEGLGLHDYYEVIDKPMDFSTIKNQMEAKDGTGYKNVREICADVR 213
Query: 439 LTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVI--------ESEYNREMRIGADYEMGF 490
L F NAM YN + DVH+MA+ LL FE+KW+ + + E D ++
Sbjct: 214 LVFKNAMKYNDERHDVHVMAKTLLGKFEEKWLQLLPKVAEEEKRREEEEAEAQLDMQLAQ 273
Query: 491 HTPTSRKAPPLPPPLDMRRILDRSESITHPMDSRLKPISTTPSSRTPAPKKPKAKDPHKR 550
++ A + L + +D L+ + + R
Sbjct: 274 EAAHAKMAREISNEL-------------YDIDMHLEEVREMVIRKC-------------R 307
Query: 551 DMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWELDR 610
M+ +EK+KL L L +E L ++I+ + N S +E+++DID+ TLW L
Sbjct: 308 KMSTEEKRKLGAALSRLSAEDLSKALEIVAQNNPSFQATAEEVDLDIDAQTESTLWRLKF 367
Query: 611 FVTN 614
FV +
Sbjct: 368 FVKD 371
>gi|213406251|ref|XP_002173897.1| bromodomain-containing protein [Schizosaccharomyces japonicus
yFS275]
gi|212001944|gb|EEB07604.1| bromodomain-containing protein [Schizosaccharomyces japonicus
yFS275]
Length = 726
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 140/287 (48%), Gaps = 25/287 (8%)
Query: 373 KSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKS 429
K C A+L++L K +H + F PVD G DYF +I+HPMDLGT++ +LN N Y +
Sbjct: 396 KFCQAVLKELFKKQHETYAYPFYQPVDPVAFGCPDYFKVIKHPMDLGTMQNKLNHNEYAN 455
Query: 430 PKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVV---IESEYNREMRIGADY 486
K+F DV L F N +NP G V++M ++L +F KW E++ + +DY
Sbjct: 456 IKDFEADVNLVFKNCYRFNPPGTPVYLMGKKLETVFRSKWAEKPDFEAQATAQSLSASDY 515
Query: 487 EMG----FHTPTSRKAPPLPPPLDMRRILDRSESITHPMDSRLK--PISTTPSSRTPAPK 540
F + + R ++ + M SR + PIS +R+
Sbjct: 516 YYADNEVFGSDDEYDEEEGEEFEAVNRQINMLQHTLKQMKSRARSNPISRRRRARS---- 571
Query: 541 KPKAKDPHKRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSV 600
++ +P +TY+ + +L+ L +E+L + +I+++ L + DEIE+D+ ++
Sbjct: 572 --QSAEPQYPPITYEMQTELAEQCNYLTAEQLTYVAEILRQAMPWL-RDTDEIEIDVANM 628
Query: 601 DAETLWELDRFVTNYKK---SLSKNKRKAEL---ANQARAVAQQNVQ 641
+ E +++ +V K L ++KRK + A QA + Q Q
Sbjct: 629 EPEVFYQVYYYVCKDKMPTPPLMRDKRKGRVLSEAEQAEKIRQLRAQ 675
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 69/176 (39%), Gaps = 15/176 (8%)
Query: 301 SISTVENSLGLSENVEKEKRTPKANQFYRNSEFLLAKDKFPPAESNKKSKLNGKKQAGNE 360
S V N ENV FY NSE L+ PA + K+Q
Sbjct: 186 SAPVVANDTQPKENVAAGSNYNNTTAFYNNSEVALSHRAPSPAREHVPRPPLTKEQ---- 241
Query: 361 LAHGFGTGSKIFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKT 420
K A+L +L + + F PVD + DY II+HPMDL T++
Sbjct: 242 -----------HKYIQAMLRQLRRCRDSIPFRVPVDPVKQNIPDYPLIIKHPMDLSTMQR 290
Query: 421 RLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEY 476
+L Y S + F +D+ L F N YN V +M + L F + + S Y
Sbjct: 291 KLTNREYDSAQSFIDDMNLMFDNCFLYNGTESPVGVMGKNLQATFTKQLKQLPSSY 346
>gi|410903440|ref|XP_003965201.1| PREDICTED: bromodomain-containing protein 2-like [Takifugu
rubripes]
Length = 546
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 95/290 (32%), Positives = 147/290 (50%), Gaps = 29/290 (10%)
Query: 363 HGFGTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVK 419
HG S+ K C+ +L++++ KH W F PVD L L+DY II+HPMDL TVK
Sbjct: 240 HGL---SERLKFCNVILKEMLSKKHAAYAWPFYEPVDAVALQLNDYHDIIKHPMDLSTVK 296
Query: 420 TRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVI--ESEYN 477
+L++ Y + FA DV+L F N YNP +V A++L +FE + I E
Sbjct: 297 RKLDRGEYPNADSFAADVQLIFSNCYKYNPSHLEVVAHAKKLQGVFEKSFAKIPDEPTGT 356
Query: 478 REMRIGADYEMGFHTPTSRKAPPLPPPLD-MRRILDRSESITH-PMDSRLKP-------- 527
+ + A G T A L + ++ + D +I+ P++ R +
Sbjct: 357 GQAQTAA---FGKSDLTEEGATRLAELQEQVKAVPDHLAAISEVPVNKRKRKDDESKTDR 413
Query: 528 -ISTTPSSRTPAPKKPKAKDPHKR--DMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNS 584
+P+S +P K K DP + +TY+EK +LS ++ LP +KL +VQII+
Sbjct: 414 QTRGSPTSDPGSPCKLKTWDPDNKCLPLTYEEKHQLSLDINRLPGKKLGRVVQIIQTLEP 473
Query: 585 SLFQ-HDDEIEVDIDSVDAETLWELDRFVTNYKKSL-SKNKRKAELANQA 632
S+ + + DEIE+D + + TL L ++V KK L K KR + +NQA
Sbjct: 474 SMCETNPDEIEIDFEVLKPSTLRRLQQYV---KKCLHQKFKRFQKRSNQA 520
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 50/91 (54%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L +H + W F PVD LGL DY II PMDLGT+K RL N+Y + E +D
Sbjct: 39 VVKSLWRHHYAWPFYEPVDAVGLGLADYHKIITSPMDLGTIKKRLENNYYWTASECLQDF 98
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN D+ +MA L KIF K
Sbjct: 99 NTMFTNCYIYNKPTDDIVLMALTLEKIFLQK 129
>gi|345488359|ref|XP_003425887.1| PREDICTED: hypothetical protein LOC100119446 isoform 3 [Nasonia
vitripennis]
Length = 1549
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 64/165 (38%), Positives = 90/165 (54%), Gaps = 20/165 (12%)
Query: 321 TPKANQFYRNSEFLLAKDKFPPAESNKKSKLNGKKQAGNELAHGFGTGSKI-------FK 373
TP AN F + P +S K +K+ ++++G ++ T SK+ K
Sbjct: 348 TPTANSF---------DPIYAPLDS-KNAKIPTRRESGRQIKKPQHTSSKLKDKLSEALK 397
Query: 374 SCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSP 430
SC+ +L++L KH W F PVD + LGLHDY II+ PMDLGTVK +++K Y +
Sbjct: 398 SCNEILKELFSKKHSSYAWPFYKPVDAELLGLHDYHDIIKKPMDLGTVKVKMDKREYNTA 457
Query: 431 KEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
EFA DVRL F N YNP DV MA++L +FE ++ I E
Sbjct: 458 SEFAADVRLIFTNCYKYNPPDHDVVAMAKKLQDVFEMRYAKIPDE 502
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 57/98 (58%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+L+ L KH+ W F PVD K L L DY II+H MDLGT+K RL +Y S KE +D+
Sbjct: 76 VLKPLWKHQFAWPFQQPVDAKKLNLPDYHKIIKHSMDLGTIKKRLENTYYWSGKECVQDL 135
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
F N YN G+DV +MA+ L ++F K + E
Sbjct: 136 NTMFTNCYVYNKPGEDVVVMAQTLERLFLTKVAQMPKE 173
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWEL 608
+ M+YDEK++LS ++ LP +KL +V II+ R SL + DEIE+D +++ TL EL
Sbjct: 703 KPMSYDEKRQLSLDINKLPGDKLGRVVHIIQSREPSLRDSNPDEIEIDFETLKPSTLREL 762
Query: 609 DRFV 612
+ +V
Sbjct: 763 ENYV 766
>gi|350416106|ref|XP_003490842.1| PREDICTED: homeotic protein female sterile-like isoform 2 [Bombus
impatiens]
Length = 1452
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 66/165 (40%), Positives = 90/165 (54%), Gaps = 21/165 (12%)
Query: 321 TPKANQFYRNSEFLLAKDKFPPAESNKKSKLNGKKQAGNEL---AHGFGTG----SKIFK 373
TP AN F E L D K +K+ ++++G ++ H G S+ K
Sbjct: 331 TPTANSF----EPLYKLDP-------KNAKIPTRRESGRQIKKPQHTTGKSKEKLSEALK 379
Query: 374 SCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSP 430
SC+ +L++L KH W F PVD + LGLHDY II+ PMDLGTVKT+++ YK+
Sbjct: 380 SCNEILKELFSKKHSGYAWPFYKPVDAELLGLHDYHDIIKKPMDLGTVKTKMDNREYKTA 439
Query: 431 KEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
+EFA DVRL F N YNP DV MA +L +FE ++ I E
Sbjct: 440 QEFASDVRLIFTNCYKYNPPDHDVVAMARKLQDVFEMRYAKIPDE 484
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 56/99 (56%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
+L+ + KH+ W F PVD K L L DY II+ PMDLGT+K RL +Y S KE +D
Sbjct: 69 GVLKPVWKHQFAWPFQQPVDAKKLNLPDYHKIIKQPMDLGTIKKRLENTYYWSGKECIQD 128
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
F N YN G+DV +MA+ L K+F K + E
Sbjct: 129 FNTMFTNCYVYNKPGEDVVVMAQALEKLFLTKVAQMPKE 167
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWEL 608
+ M+YDEK++LS ++ LP +KL +V II+ R SL + DEIE+D +++ TL EL
Sbjct: 698 KPMSYDEKRQLSLDINKLPGDKLGRVVHIIQSREPSLRDSNPDEIEIDFETLKPSTLREL 757
Query: 609 DRFV 612
+ +V
Sbjct: 758 ESYV 761
>gi|345488357|ref|XP_001603224.2| PREDICTED: hypothetical protein LOC100119446 isoform 1 [Nasonia
vitripennis]
Length = 1549
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 64/165 (38%), Positives = 90/165 (54%), Gaps = 20/165 (12%)
Query: 321 TPKANQFYRNSEFLLAKDKFPPAESNKKSKLNGKKQAGNELAHGFGTGSKI-------FK 373
TP AN F + P +S K +K+ ++++G ++ T SK+ K
Sbjct: 342 TPTANSF---------DPIYAPLDS-KNAKIPTRRESGRQIKKPQHTSSKLKDKLSEALK 391
Query: 374 SCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSP 430
SC+ +L++L KH W F PVD + LGLHDY II+ PMDLGTVK +++K Y +
Sbjct: 392 SCNEILKELFSKKHSSYAWPFYKPVDAELLGLHDYHDIIKKPMDLGTVKVKMDKREYNTA 451
Query: 431 KEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
EFA DVRL F N YNP DV MA++L +FE ++ I E
Sbjct: 452 SEFAADVRLIFTNCYKYNPPDHDVVAMAKKLQDVFEMRYAKIPDE 496
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 57/98 (58%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+L+ L KH+ W F PVD K L L DY II+H MDLGT+K RL +Y S KE +D+
Sbjct: 70 VLKPLWKHQFAWPFQQPVDAKKLNLPDYHKIIKHSMDLGTIKKRLENTYYWSGKECVQDL 129
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
F N YN G+DV +MA+ L ++F K + E
Sbjct: 130 NTMFTNCYVYNKPGEDVVVMAQTLERLFLTKVAQMPKE 167
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWEL 608
+ M+YDEK++LS ++ LP +KL +V II+ R SL + DEIE+D +++ TL EL
Sbjct: 697 KPMSYDEKRQLSLDINKLPGDKLGRVVHIIQSREPSLRDSNPDEIEIDFETLKPSTLREL 756
Query: 609 DRFV 612
+ +V
Sbjct: 757 ENYV 760
>gi|345488355|ref|XP_003425886.1| PREDICTED: hypothetical protein LOC100119446 isoform 2 [Nasonia
vitripennis]
gi|345488361|ref|XP_003425888.1| PREDICTED: hypothetical protein LOC100119446 isoform 4 [Nasonia
vitripennis]
Length = 1555
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 64/165 (38%), Positives = 90/165 (54%), Gaps = 20/165 (12%)
Query: 321 TPKANQFYRNSEFLLAKDKFPPAESNKKSKLNGKKQAGNELAHGFGTGSKI-------FK 373
TP AN F + P +S K +K+ ++++G ++ T SK+ K
Sbjct: 348 TPTANSF---------DPIYAPLDS-KNAKIPTRRESGRQIKKPQHTSSKLKDKLSEALK 397
Query: 374 SCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSP 430
SC+ +L++L KH W F PVD + LGLHDY II+ PMDLGTVK +++K Y +
Sbjct: 398 SCNEILKELFSKKHSSYAWPFYKPVDAELLGLHDYHDIIKKPMDLGTVKVKMDKREYNTA 457
Query: 431 KEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
EFA DVRL F N YNP DV MA++L +FE ++ I E
Sbjct: 458 SEFAADVRLIFTNCYKYNPPDHDVVAMAKKLQDVFEMRYAKIPDE 502
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 57/98 (58%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+L+ L KH+ W F PVD K L L DY II+H MDLGT+K RL +Y S KE +D+
Sbjct: 76 VLKPLWKHQFAWPFQQPVDAKKLNLPDYHKIIKHSMDLGTIKKRLENTYYWSGKECVQDL 135
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
F N YN G+DV +MA+ L ++F K + E
Sbjct: 136 NTMFTNCYVYNKPGEDVVVMAQTLERLFLTKVAQMPKE 173
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWEL 608
+ M+YDEK++LS ++ LP +KL +V II+ R SL + DEIE+D +++ TL EL
Sbjct: 703 KPMSYDEKRQLSLDINKLPGDKLGRVVHIIQSREPSLRDSNPDEIEIDFETLKPSTLREL 762
Query: 609 DRFV 612
+ +V
Sbjct: 763 ENYV 766
>gi|326487788|dbj|BAK05566.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 193
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 53/102 (51%), Positives = 66/102 (64%)
Query: 375 CSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFA 434
C +L KLM H GW+F+ VD G+ DYF +IR+PMDLGTVK +L Y S +FA
Sbjct: 84 CRNILGKLMDHPGGWIFHKLVDPDLFGIPDYFDVIRNPMDLGTVKKKLTNKSYLSTDDFA 143
Query: 435 EDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEY 476
DVRLTF NAMTYNP G VH +AEQL +F +W E ++
Sbjct: 144 ADVRLTFSNAMTYNPPGIQVHTVAEQLNIMFNLEWTSYERKW 185
>gi|350416103|ref|XP_003490841.1| PREDICTED: homeotic protein female sterile-like isoform 1 [Bombus
impatiens]
Length = 1486
Score = 115 bits (289), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 53/110 (48%), Positives = 69/110 (62%), Gaps = 3/110 (2%)
Query: 369 SKIFKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN 425
S+ KSC+ +L++L KH W F PVD + LGLHDY II+ PMDLGTVKT+++
Sbjct: 409 SEALKSCNEILKELFSKKHSGYAWPFYKPVDAELLGLHDYHDIIKKPMDLGTVKTKMDNR 468
Query: 426 WYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
YK+ +EFA DVRL F N YNP DV MA +L +FE ++ I E
Sbjct: 469 EYKTAQEFASDVRLIFTNCYKYNPPDHDVVAMARKLQDVFEMRYAKIPDE 518
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 56/99 (56%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
+L+ + KH+ W F PVD K L L DY II+ PMDLGT+K RL +Y S KE +D
Sbjct: 77 GVLKPVWKHQFAWPFQQPVDAKKLNLPDYHKIIKQPMDLGTIKKRLENTYYWSGKECIQD 136
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
F N YN G+DV +MA+ L K+F K + E
Sbjct: 137 FNTMFTNCYVYNKPGEDVVVMAQALEKLFLTKVAQMPKE 175
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWEL 608
+ M+YDEK++LS ++ LP +KL +V II+ R SL + DEIE+D +++ TL EL
Sbjct: 732 KPMSYDEKRQLSLDINKLPGDKLGRVVHIIQSREPSLRDSNPDEIEIDFETLKPSTLREL 791
Query: 609 DRFV 612
+ +V
Sbjct: 792 ESYV 795
>gi|383859381|ref|XP_003705173.1| PREDICTED: homeotic protein female sterile-like [Megachile
rotundata]
Length = 1489
Score = 115 bits (289), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 53/110 (48%), Positives = 69/110 (62%), Gaps = 3/110 (2%)
Query: 369 SKIFKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN 425
S+ KSC+ +L++L KH W F PVD + LGLHDY II+ PMDLGTVKT+++
Sbjct: 409 SEALKSCNEILKELFSKKHSGYAWPFYKPVDAELLGLHDYHDIIKKPMDLGTVKTKMDNR 468
Query: 426 WYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
YK+ +EFA DVRL F N YNP DV MA +L +FE ++ I E
Sbjct: 469 EYKTAQEFASDVRLIFTNCYKYNPPDHDVVAMARKLQDVFEMRYAKIPDE 518
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 56/99 (56%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
+L+ + KH+ W F PVD K L L DY II+ PMDLGT+K RL +Y S KE +D
Sbjct: 77 GVLKPVWKHQFAWPFQQPVDAKKLNLPDYHKIIKQPMDLGTIKKRLENTYYWSGKECIQD 136
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
F N YN G+DV +MA+ L K+F K + E
Sbjct: 137 FNTMFTNCYVYNKPGEDVVVMAQALEKLFLTKVAQMPKE 175
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWEL 608
+ M+YDEK++LS ++ LP +KL +V II+ R SL + DEIE+D +++ TL EL
Sbjct: 732 KPMSYDEKRQLSLDINKLPGDKLGRVVHIIQSREPSLRDSNPDEIEIDFETLKPSTLREL 791
Query: 609 DRFV 612
+ +V
Sbjct: 792 ESYV 795
>gi|328788637|ref|XP_624214.3| PREDICTED: hypothetical protein LOC551826 [Apis mellifera]
Length = 1492
Score = 115 bits (289), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 53/110 (48%), Positives = 69/110 (62%), Gaps = 3/110 (2%)
Query: 369 SKIFKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN 425
S+ KSC+ +L++L KH W F PVD + LGLHDY II+ PMDLGTVKT+++
Sbjct: 409 SEALKSCNEILKELFSKKHSGYAWPFYKPVDAELLGLHDYHDIIKKPMDLGTVKTKMDNR 468
Query: 426 WYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
YK+ +EFA DVRL F N YNP DV MA +L +FE ++ I E
Sbjct: 469 EYKTAQEFASDVRLIFTNCYKYNPPDHDVVAMARKLQDVFEMRYAKIPDE 518
Score = 95.5 bits (236), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 56/99 (56%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
+L+ + KH+ W F PVD K L L DY II+ PMDLGT+K RL +Y S KE +D
Sbjct: 77 GVLKPVWKHQFAWPFQQPVDAKKLNLPDYHKIIKQPMDLGTIKKRLENTYYWSGKECIQD 136
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
F N YN G+DV +MA+ L K+F K + E
Sbjct: 137 FNTMFTNCYVYNKPGEDVVVMAQALEKLFLTKVAQMPKE 175
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWEL 608
+ M+YDEK++LS ++ LP +KL +V II+ R SL + DEIE+D +++ TL EL
Sbjct: 731 KPMSYDEKRQLSLDINKLPGDKLGRVVHIIQSREPSLRDSNPDEIEIDFETLKPSTLREL 790
Query: 609 DRFV 612
+ +V
Sbjct: 791 ESYV 794
>gi|301118949|ref|XP_002907202.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262105714|gb|EEY63766.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 786
Score = 115 bits (288), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 132/245 (53%), Gaps = 6/245 (2%)
Query: 372 FKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPK 431
K C ++L+ LM + F APVD LG+ DYF +I+ PMDLGT++ L +Y SP
Sbjct: 277 MKKCLSILKGLMANPKAAPFMAPVDPVALGIPDYFHVIKEPMDLGTIRNNLESGFYDSPS 336
Query: 432 EFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEMGFH 491
+FAE VRLTF NA YN VHI A +L+ FE ++ + ++++R G +
Sbjct: 337 DFAEHVRLTFRNATLYNAAHSQVHIYARKLVDDFEKRFKTDGTYSSKKVRGGKGTKGNTK 396
Query: 492 TPTSRKAPPLPPPLDMRRILDRSESITHPMDSRLKPISTTPSSRTPAPKKPK--AKDPHK 549
TS + L + ++ ++R ++ + + + S++ P K ++
Sbjct: 397 RQTSGEDNGL--IMSLKEDIERLKATLEQLQPAMAKAVASKSAKAAKPFKMDDLTEEELN 454
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKR--NSSLFQHDDEIEVDIDSVDAETLWE 607
M+ +K +LS++++ LP +K++ ++QII + ++L +DE+E+DI++ D L
Sbjct: 455 EPMSQMDKARLSSDIKLLPQDKINRVLQIIAEAVPVANLANENDEVELDINAFDTRCLRM 514
Query: 608 LDRFV 612
L+ +V
Sbjct: 515 LEGYV 519
>gi|296421346|ref|XP_002840226.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636440|emb|CAZ84417.1| unnamed protein product [Tuber melanosporum]
Length = 825
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 134/291 (46%), Gaps = 63/291 (21%)
Query: 372 FKSCSALLEKLMK---HKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
+ C +L++L K H + F PVD L + DYF II+ PMDL T+ T+L N Y
Sbjct: 461 LRFCDIVLKELHKKQYHDTAFPFYVPVDPVALNIPDYFKIIKKPMDLSTISTKLKTNQYD 520
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEM 488
S +F D+RL F N +NP Q VH + L IF+ KW ++ Y R+
Sbjct: 521 SASDFEADIRLMFSNCYKFNPSDQHVHKCGKALENIFDQKWAE-KASYTRD-------NP 572
Query: 489 GFHTPTSRKAPPLPPPL-----DMR-----------RILDRSESITHPMDSRLK------ 526
G H+P S + PP+ DM R+L++ S +K
Sbjct: 573 GSHSPVS-----VSPPVEDEDEDMSGDESEDQEQNIRLLEQQLEAMKDQISAMKNGQKKK 627
Query: 527 --P------------------ISTTPSSRTPAPKKPKAKD-PHKRDMTYDEKQKLSTNLQ 565
P +ST P + PKK K K P+ +T ++K +LS +
Sbjct: 628 KTPPATSTKRSKGGSSRKGSLVSTAPPANPSRPKKGKEKKVPY---ITMEQKTELSERIN 684
Query: 566 SLPSEKLDNIVQIIKKRNSSLFQ-HDDEIEVDIDSVDAETLWELDRFVTNY 615
LP+ K+ +++I++ L DDEIE+DID +D +TL++L +VT +
Sbjct: 685 FLPTGKMAYALKMIRENMPDLGNTADDEIELDIDELDPQTLYKLHTYVTRH 735
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 46/95 (48%)
Query: 372 FKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPK 431
K ++ L + K F PVD L + +YF +I +PMDL T++ +LN Y S +
Sbjct: 246 IKYLLVVIRSLRRTKDARPFTMPVDPIKLNVPNYFEVITNPMDLQTMEKKLNNKEYSSSR 305
Query: 432 EFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFE 466
+F D L N +T+N + V + +FE
Sbjct: 306 DFLADFNLILTNCVTFNGREHPVSENGRVMKAVFE 340
>gi|356558209|ref|XP_003547400.1| PREDICTED: transcription factor GTE1-like [Glycine max]
Length = 349
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/249 (30%), Positives = 120/249 (48%), Gaps = 25/249 (10%)
Query: 367 TGSKIFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNK-- 424
T ++ S + ++ + W F PVDV+ LGLHDY+ II PMD GT+K ++N
Sbjct: 86 TMKEVMHQFSIIFHQITHQRWAWPFMEPVDVEGLGLHDYYQIIEKPMDFGTIKRKMNAKD 145
Query: 425 -NWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIG 483
+ YK+ +E DVRL F NAM YN + DVHIMA+ LL+ FE KW+ + + + R
Sbjct: 146 GSGYKNVREIYSDVRLVFENAMKYNGEKNDVHIMAKTLLEKFEKKWLQLLPKVAQAEREK 205
Query: 484 ADYEMGFHTPTSRKAPPLPPPLDMRRILDRSESITHPMDSRLKPISTTPSSRTPAPKKPK 543
+ + +++A D+R L +D +LK + +
Sbjct: 206 EEARVLLEAKRAQEATYAKMTKDIRHAL-------CDVDEQLKNLKEMVIKKC------- 251
Query: 544 AKDPHKRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDD-EIEVDIDSVDA 602
R ++ EK L NL L L + II + + + FQHD ++++D+D
Sbjct: 252 ------RKLSTHEKLALKKNLSRLNGGNLLKAMSIIHEIDPT-FQHDAPQVDLDLDRQSD 304
Query: 603 ETLWELDRF 611
LW+L+ F
Sbjct: 305 FILWKLNLF 313
>gi|332026521|gb|EGI66642.1| Bromodomain-containing protein 2 [Acromyrmex echinatior]
Length = 1559
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/110 (48%), Positives = 68/110 (61%), Gaps = 3/110 (2%)
Query: 369 SKIFKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN 425
S+ KSC+ +L++L KH W F PVD + LGLHDY II+ PMDLGTVKT+++
Sbjct: 449 SEALKSCNDILKELFAKKHSPYAWPFYKPVDAELLGLHDYHDIIKKPMDLGTVKTKMDNR 508
Query: 426 WYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
YK+ EFA DVRL F N YNP DV MA +L IFE ++ + E
Sbjct: 509 QYKTAHEFASDVRLIFTNCYKYNPPDHDVVSMARKLQDIFEMRYAKVPDE 558
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 57/99 (57%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
+L+ + KH+ W F PVD K L L DY II+ PMDLGT+K RL ++Y S KE +D
Sbjct: 115 GVLKPVWKHQFAWPFQQPVDAKKLSLPDYHKIIKKPMDLGTIKKRLENSYYWSGKECIQD 174
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
F N YN G+DV +MA+ L K+F K + E
Sbjct: 175 FNTMFTNCYVYNKPGEDVVVMAQALEKLFLTKVAQMPKE 213
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWEL 608
+ M+YDEK++LS ++ LP +KL +V II+ R SL + DEIE+D +++ TL EL
Sbjct: 775 KPMSYDEKRQLSLDINKLPGDKLGRVVHIIQSREPSLRDSNPDEIEIDFETLKPSTLREL 834
Query: 609 DRFV 612
+ +V
Sbjct: 835 ESYV 838
>gi|427798983|gb|JAA64943.1| Putative bromodomain-containing protein 2, partial [Rhipicephalus
pulchellus]
Length = 852
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 52/113 (46%), Positives = 71/113 (62%), Gaps = 3/113 (2%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G ++ K C+++L++L KH W F PVD + LGLHDY II+HPMDLGTVK ++
Sbjct: 376 GKLTEQMKYCNSILKELFAKKHAGYAWPFYKPVDAELLGLHDYHEIIKHPMDLGTVKQKM 435
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
+ YKSP+EFA DVRL F N YNP +V MA +L +FE ++ + E
Sbjct: 436 DNREYKSPEEFAGDVRLIFTNCYKYNPPDHEVVAMARKLQDVFEMRYAKMPDE 488
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 54/89 (60%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
+++ + KH+ W F PVD L L DY IIRHPMDLGT+K RL +Y S +E ED
Sbjct: 69 VVMKAMWKHQFAWPFQQPVDTVKLNLPDYHRIIRHPMDLGTIKKRLEHCYYSSAQECIED 128
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIF 465
+ F N YN G+DV +MA+ L K+F
Sbjct: 129 FKTMFTNCYVYNKPGEDVVLMAQALEKLF 157
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 48/77 (62%), Gaps = 4/77 (5%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWEL 608
+ M+YDEK++LS ++ LP +KL +V II+ R SL + DEIE+D +++ TL EL
Sbjct: 686 KPMSYDEKRQLSLDINKLPGDKLGRVVHIIQSREPSLRDSNPDEIEIDFETLKPSTLREL 745
Query: 609 DRFVTNYKKSLSKNKRK 625
+ +V + L K RK
Sbjct: 746 ESYVAS---CLRKKPRK 759
>gi|449452116|ref|XP_004143806.1| PREDICTED: transcription factor GTE1-like [Cucumis sativus]
gi|449485919|ref|XP_004157310.1| PREDICTED: transcription factor GTE1-like [Cucumis sativus]
Length = 378
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 124/265 (46%), Gaps = 43/265 (16%)
Query: 359 NELAHGFGTGSKIFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTV 418
EL FGT +L ++ +HK W F PVDV+ LGLHDY+ +I PMD T+
Sbjct: 95 QELMRQFGT----------ILRQISQHKWAWPFMQPVDVEGLGLHDYYEVIDKPMDFSTI 144
Query: 419 KTRL---NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKW------ 469
K ++ + YK+ +E DVRL F NAM YN + DVH+MA+ LL FE+KW
Sbjct: 145 KNQMEAKDGTGYKNVREICSDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPK 204
Query: 470 VVIESEYNREMRIGADYEMGFHTPTSRKAPPLPPPLDMRRILDRSESITHPMDSRLKPIS 529
V E + + A +M ++ M R D S I + +D +L+ +
Sbjct: 205 VTEEEKRREDEEAEALLDMQLAQEAAQAK--------MAR--DISNEI-YEVDMQLEELR 253
Query: 530 TTPSSRTPAPKKPKAKDPHKRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQH 589
R ++ +EK+KL L L E + ++I+ + N S
Sbjct: 254 ELVVQNC-------------RKISTEEKRKLGAALTKLSPEDISKALEIVAENNPSFQAT 300
Query: 590 DDEIEVDIDSVDAETLWELDRFVTN 614
+E+++DID+ TLW L FV +
Sbjct: 301 AEEVDLDIDAQSESTLWRLKFFVKD 325
>gi|281209232|gb|EFA83405.1| bromodomain-containing protein [Polysphondylium pallidum PN500]
Length = 1172
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/260 (30%), Positives = 121/260 (46%), Gaps = 47/260 (18%)
Query: 365 FGTGSKI-----FKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVK 419
F +G I K C +L+ LM H+ G+ F PVD L + DYFT I+HPMD GT++
Sbjct: 520 FPSGDNISLVGPMKRCLEILDFLMNHQMGYPFLVPVDPIALNILDYFTYIKHPMDFGTIR 579
Query: 420 TRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNRE 479
L Y++P EFA D RL F NA YNP VHIMA+ L +FE K+ +E
Sbjct: 580 NSLLDGVYEAPDEFAADCRLVFSNARLYNPPANQVHIMAKTLEDLFEKKYAKALAE---- 635
Query: 480 MRIGADYEMGFHTPTSRKAPPLPP--PLD---MRRILDRSESITHPMDSRLKPISTTPSS 534
PP P P + ++R+ +++T ++ K +
Sbjct: 636 -------------------PPSPEIQPEESEKIKRLTMEMKTMTKELEKMKKESTGGGRG 676
Query: 535 RTPAPKKPKAKDPHKRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQH--DDE 592
R +P D EK L + +L L ++Q+I + +L Q+ +E
Sbjct: 677 RYREAARPMTLD---------EKTHLGAAINALHPSNLPKLIQVI---SHTLDQNTAQEE 724
Query: 593 IEVDIDSVDAETLWELDRFV 612
IE+D++ +D TL L++FV
Sbjct: 725 IEIDLEKLDTGTLRRLEQFV 744
>gi|348538983|ref|XP_003456969.1| PREDICTED: hypothetical protein LOC100693386 [Oreochromis
niloticus]
Length = 1432
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/255 (30%), Positives = 125/255 (49%), Gaps = 27/255 (10%)
Query: 261 LPVSDVVDNGIKRGHSEVASVGVP-VTRVGITRPSRPLNQLSISTVENSLGLSENVEKEK 319
L SDV+ G+ SV P VT G+ P+ P+ Q S + ++ S+ + +
Sbjct: 324 LSASDVLAQGM-------TSVPPPTVTHPGL-HPTVPILQSSPALIKKK---SQKRKADT 372
Query: 320 RTPKANQFYRNSEFLLAKDKFPPAESNKKSKLNGKKQAGNELAHGFGTGSKI-------- 371
TP AN S + A+ + P +S++ SK ++ + + H G G ++
Sbjct: 373 TTPTANDQLSESSPVSAETR-PRRDSSRPSKQPKREASQPDSQHHLGGGLEMGESGTPKR 431
Query: 372 ---FKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN 425
+ C+ L+ +++ KH W F PVD K LGLHDY II+HPMDL T+K +L+
Sbjct: 432 QEQLRWCARLVREMLSKKHVAYAWPFYKPVDAKALGLHDYHEIIKHPMDLSTIKKKLDNR 491
Query: 426 WYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGAD 485
Y+ +EFA DVRL F N YNP DV MA +L +FE ++ + + + +
Sbjct: 492 QYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEMRFAKMPDDPEEPVPVPTP 551
Query: 486 YEMGFHTPTSRKAPP 500
P++R+ PP
Sbjct: 552 SSALHPAPSTRQVPP 566
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 56/98 (57%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+L+ L KH W F APVD L L DY+ II+ PMD+GT+K RL N+Y + +E +D
Sbjct: 89 VLKTLWKHNFAWPFQAPVDAIKLNLPDYYKIIKSPMDMGTIKKRLENNYYWNAQECIQDF 148
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
F N YN G D+ +MAE L K+F K + E
Sbjct: 149 NTMFTNCYIYNKPGDDIVLMAEALEKLFLQKITEMPQE 186
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 50/76 (65%), Gaps = 4/76 (5%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLF-QHDDEIEVDIDSVDAETLWEL 608
+ M+Y+EK++LS ++ LP +KL +V II+ R SL + DEIE+D +++ TL EL
Sbjct: 704 KPMSYEEKRQLSLDINKLPGDKLGRVVHIIQTREPSLKNSNPDEIEIDFETLKPSTLREL 763
Query: 609 DRFVTNYKKSLSKNKR 624
+++V++ L K K+
Sbjct: 764 EKYVSS---CLRKKKK 776
>gi|340729450|ref|XP_003403016.1| PREDICTED: homeotic protein female sterile-like, partial [Bombus
terrestris]
Length = 497
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 53/110 (48%), Positives = 69/110 (62%), Gaps = 3/110 (2%)
Query: 369 SKIFKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN 425
S+ KSC+ +L++L KH W F PVD + LGLHDY II+ PMDLGTVKT+++
Sbjct: 13 SEALKSCNEILKELFSKKHSGYAWPFYKPVDAELLGLHDYHDIIKKPMDLGTVKTKMDNR 72
Query: 426 WYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
YK+ +EFA DVRL F N YNP DV MA +L +FE ++ I E
Sbjct: 73 EYKTAQEFASDVRLIFTNCYKYNPPDHDVVAMARKLQDVFEMRYAKIPDE 122
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 70/138 (50%), Gaps = 10/138 (7%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWEL 608
+ M+YDEK++LS ++ LP +KL +V II+ R SL + DEIE+D +++ TL EL
Sbjct: 336 KPMSYDEKRQLSLDINKLPGDKLGRVVHIIQSREPSLRDSNPDEIEIDFETLKPSTLREL 395
Query: 609 DRFVTNYKKSLSKNKRKAELANQARAVAQQNVQQQTPAPVVTEVRKEI--RTDDRIGSTS 666
+ +V + L K RK R + V ++ + E ++E+ R D G
Sbjct: 396 ESYVAS---CLRKKPRKIYF----RFCNNKKVSGKSKDEQMAEKKQELEKRLQDVTGQLG 448
Query: 667 SPVQVEKQVDNGSRSSSS 684
+ + K+V G S S
Sbjct: 449 NVKKTAKKVGTGGASGPS 466
>gi|432847788|ref|XP_004066150.1| PREDICTED: uncharacterized protein LOC101159647 [Oryzias latipes]
Length = 1469
Score = 113 bits (283), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 53/132 (40%), Positives = 74/132 (56%), Gaps = 3/132 (2%)
Query: 372 FKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
+ C+ LL++++ KH W F PVD K LGLHDY II+HPMDL T+K +L+ Y+
Sbjct: 434 LRFCARLLKEMLSKKHVAYAWPFYKPVDAKALGLHDYHDIIKHPMDLSTIKKKLDNRQYR 493
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEM 488
+EFA DVRL F N YNP DV MA +L +FE ++ + + + A
Sbjct: 494 DAQEFAADVRLMFSNCYKYNPPDHDVVSMARKLQDVFEMRFAKMPDDPEESTPVPAPSLP 553
Query: 489 GFHTPTSRKAPP 500
P+ R+APP
Sbjct: 554 LHPAPSIRQAPP 565
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 64/120 (53%), Gaps = 5/120 (4%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+L+ L KH W F APVD LGL DY+ II+ PMD+GT+K RL N+Y + +E +D
Sbjct: 49 VLKTLWKHHFAWPFQAPVDAVKLGLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 108
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNR-----EMRIGADYEMGFHT 492
F N YN G D+ +MAE L K+F K + E + R G E+G T
Sbjct: 109 NTMFTNCYIYNKPGDDIVLMAEALEKLFLQKITEMPQEETEISVLTKGRRGVRRELGLST 168
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLF-QHDDEIEVDIDSVDAETLWEL 608
+ M+Y+EK++LS ++ LP +KL +V II+ R SL + DEIE+D +++ TL EL
Sbjct: 737 KPMSYEEKRQLSLDINKLPGDKLGRVVHIIQTREPSLKNSNPDEIEIDFETLKPSTLREL 796
Query: 609 DRFVTN 614
+++V++
Sbjct: 797 EKYVSS 802
>gi|55296460|dbj|BAD68656.1| DNA-binding bromodomain-containing protein-like [Oryza sativa
Japonica Group]
gi|55297001|dbj|BAD68476.1| DNA-binding bromodomain-containing protein-like [Oryza sativa
Japonica Group]
Length = 360
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 136/290 (46%), Gaps = 40/290 (13%)
Query: 371 IFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL---NKNWY 427
+ + ++ ++ H+ F PVDV L L DY+ II PMD T++ ++ + N Y
Sbjct: 92 LMRQFGTIVRQITSHEWAEPFLKPVDVVGLQLDDYYKIITKPMDFSTIQKKMEGKDDNKY 151
Query: 428 KSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYE 487
+ +E DVRL F NAM YN + DVHIMA+ LL+ FE+KW+ + + E R D E
Sbjct: 152 NNVREIYSDVRLIFANAMKYNDERHDVHIMAKSLLEKFEEKWLQLLPKVENEERKQKDEE 211
Query: 488 MGFHTPTSRKAPP--LPPPLDMRRILDRSESITHPMDSRLKPISTTPSSRTPAPKKPKAK 545
S P + P + ++ +++ ++ +L+ + +
Sbjct: 212 -------SNGVPKVNISPEEAIAKLAKDTDNELIEINKQLEELRQMVVQKC--------- 255
Query: 546 DPHKRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETL 605
R MT EK+KL L L E+L ++++ + N S DE+E+D+D+ TL
Sbjct: 256 ----RKMTTYEKRKLGAGLCHLSPEELTKALEMVAQDNPSFEAKGDELELDMDAQSETTL 311
Query: 606 WELDRFVTNYKKSLSKN------------KRKAELANQARAVAQQNVQQQ 643
W L FV +++L + KRK E+ N A + V+QQ
Sbjct: 312 WRLKFFV---REALERQANVASGRTDENAKRKREICNALARTASKRVKQQ 358
>gi|330792873|ref|XP_003284511.1| hypothetical protein DICPUDRAFT_75494 [Dictyostelium purpureum]
gi|325085541|gb|EGC38946.1| hypothetical protein DICPUDRAFT_75494 [Dictyostelium purpureum]
Length = 1321
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 50/101 (49%), Positives = 63/101 (62%)
Query: 369 SKIFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
S +FK CS LL++LM+H F PVD LG+ DYF I+ PMD GT+K + Y
Sbjct: 645 SPVFKRCSDLLDELMEHPQAGPFLVPVDPYALGILDYFNFIKRPMDFGTIKNSIVGGVYH 704
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKW 469
+ EFAEDVRL F NA YNP VHIMA+ L +FE+K+
Sbjct: 705 TIDEFAEDVRLVFSNAKAYNPPANLVHIMAKTLEDLFEEKF 745
>gi|47209011|emb|CAF91369.1| unnamed protein product [Tetraodon nigroviridis]
Length = 530
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 86/272 (31%), Positives = 131/272 (48%), Gaps = 34/272 (12%)
Query: 369 SKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN 425
S+ K C+ LL++++ KH W F PVD + L LHDY II++PMDL TVK +++
Sbjct: 258 SERLKFCNVLLKEMLSKKHAAYAWPFYEPVDAEALQLHDYHDIIKYPMDLSTVKRKMDGG 317
Query: 426 WYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGAD 485
Y FA DVRL F N YNP +V A++L +FE + I E + A
Sbjct: 318 EYPDADSFAADVRLIFSNCYRYNPAQLEVVAQAKKLQGVFEKSFAKIPDEPANPGQAPAA 377
Query: 486 YEMGFHTPTSRKAPPLPPPLDMRRILDRSESITHPMDSRLKPISTTPSSR---------- 535
G T +A PL +++ + P RL +S P ++
Sbjct: 378 AS-GKSDRTDERAAPL---AEVQEQAGADQDKAAP--DRLAAVSEVPPNKRKKKDDQNNI 431
Query: 536 ------TPA------PKKPKAKDPHKR--DMTYDEKQKLSTNLQSLPSEKLDNIVQIIKK 581
+P KK K+ DP + +TY+EK +LS ++ LP +KL +VQII+
Sbjct: 432 DRQNRGSPTFDSGNLWKKLKSWDPEAKCLPLTYEEKHQLSLDINRLPGKKLGCVVQIIQT 491
Query: 582 RNSSLFQHD-DEIEVDIDSVDAETLWELDRFV 612
S + + DEIE+D + + TL +L ++V
Sbjct: 492 LEPSTCEANPDEIEIDFEVLKPSTLRQLQQYV 523
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 50/91 (54%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L +H + W F PVD LGL DY II PMDLGT+K RL N+Y + E +D
Sbjct: 40 VVKSLWRHHYAWPFYEPVDAVALGLSDYHKIITSPMDLGTIKKRLENNYYWTASECLQDF 99
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN D+ +MA L KIF K
Sbjct: 100 NTMFTNCYIYNKPTDDIVLMALTLEKIFLQK 130
>gi|66826485|ref|XP_646597.1| bromodomain-containing protein [Dictyostelium discoideum AX4]
gi|74858341|sp|Q55C84.1|Y0170_DICDI RecName: Full=Bromodomain-containing protein DDB_G0270170
gi|60474498|gb|EAL72435.1| bromodomain-containing protein [Dictyostelium discoideum AX4]
Length = 1578
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 52/105 (49%), Positives = 66/105 (62%), Gaps = 2/105 (1%)
Query: 371 IFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSP 430
+FK C LLE+L +H+H F VD LG+ DYF +I+HPMDLGT+K L Y +
Sbjct: 740 VFKRCLDLLEELFEHQHSPPFLVAVDPYALGILDYFDVIKHPMDLGTIKASLIGGGYDTI 799
Query: 431 KEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKW--VVIE 473
+FAED RL F NA TYNP VHIMA+ L +FE + V+IE
Sbjct: 800 DKFAEDCRLVFSNAKTYNPSTNPVHIMAQSLEDVFEKGFPKVLIE 844
>gi|297597282|ref|NP_001043715.2| Os01g0648700 [Oryza sativa Japonica Group]
gi|55296880|dbj|BAD68333.1| PSTVd RNA-biding protein-like [Oryza sativa Japonica Group]
gi|255673505|dbj|BAF05629.2| Os01g0648700 [Oryza sativa Japonica Group]
Length = 238
Score = 112 bits (281), Expect = 6e-22, Method: Composition-based stats.
Identities = 80/246 (32%), Positives = 109/246 (44%), Gaps = 72/246 (29%)
Query: 375 CSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFA 434
C LL+KL++H+ GWVF PVD + L L DY+ I PMDLGTV+ RL + Y P FA
Sbjct: 56 CGKLLDKLLEHEDGWVFAEPVDARALRLVDYYLRISDPMDLGTVRRRLERRRYADPWAFA 115
Query: 435 EDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEMGFHTPT 494
DVRLTF+NAM+YN G V+ A +L +IFE W P+
Sbjct: 116 ADVRLTFNNAMSYNSAGDPVYESAAELSEIFEAGW-----------------------PS 152
Query: 495 SRKAPPLPPPLDMRRILDRSESITHPMDSRLKPISTTPSSRTPAPKKPKAKDPHKRDMTY 554
APP PP + +R
Sbjct: 153 VLAAPPRPPDAERKR--------------------------------------------- 167
Query: 555 DEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWELDRFVTN 614
+LS L LP + +I+KKR+ L + + +EVD+D D+ TL ELDR V
Sbjct: 168 ----RLSGLLPRLPVGAQVTVAEIMKKRDGCLREVNGMMEVDLDRADSATLDELDRMVAE 223
Query: 615 YKKSLS 620
+ +L+
Sbjct: 224 HGAALA 229
>gi|357130613|ref|XP_003566942.1| PREDICTED: transcription factor GTE4-like [Brachypodium distachyon]
Length = 215
Score = 112 bits (280), Expect = 7e-22, Method: Composition-based stats.
Identities = 54/107 (50%), Positives = 72/107 (67%)
Query: 369 SKIFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
++ F C LL++L++H WVF+ PVDV LG+ DY+T+I PMDLGTV +RLN+ Y
Sbjct: 31 ARAFDRCRELLDQLLQHDDAWVFDKPVDVYELGISDYYTMIPDPMDLGTVSSRLNRLRYA 90
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
P+ FAEDVRLTF NAMT+N + V+ A +L +IFE W I E
Sbjct: 91 DPRAFAEDVRLTFRNAMTFNDEDDAVYKSAAELSRIFESGWASILVE 137
>gi|307182453|gb|EFN69688.1| Homeotic protein female sterile [Camponotus floridanus]
Length = 1541
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 52/110 (47%), Positives = 67/110 (60%), Gaps = 3/110 (2%)
Query: 369 SKIFKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN 425
S+ KSC+ +L++L KH W F PVD + LGLHDY II+ PMDLGTVK +++
Sbjct: 433 SEALKSCNDILKELFAKKHSSYAWPFYKPVDAELLGLHDYHEIIKKPMDLGTVKAKMDNR 492
Query: 426 WYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
YK+ EFA DVRL F N YNP DV MA +L IFE ++ + E
Sbjct: 493 QYKTAHEFASDVRLIFTNCYKYNPPDHDVVSMARKLQDIFEMRYAKVPDE 542
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 57/99 (57%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
+L+ + KH+ W F PVD K L L DY II+ PMDLGT+K RL ++Y S KE +D
Sbjct: 100 GVLKPVWKHQFAWPFQQPVDAKKLNLPDYHKIIKKPMDLGTIKKRLENSYYWSGKECIQD 159
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
F N YN G+DV +MA+ L K+F K + E
Sbjct: 160 FNTMFTNCYVYNKPGEDVVVMAQALEKLFLTKVAQMPKE 198
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWEL 608
+ M+YDEK++LS ++ LP +KL +V II+ R SL + DEIE+D +++ TL EL
Sbjct: 760 KPMSYDEKRQLSLDINKLPGDKLGRVVHIIQSREPSLRDSNPDEIEIDFETLKPSTLREL 819
Query: 609 DRFV 612
+ +V
Sbjct: 820 ESYV 823
>gi|322801602|gb|EFZ22243.1| hypothetical protein SINV_03245 [Solenopsis invicta]
Length = 877
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 53/110 (48%), Positives = 68/110 (61%), Gaps = 3/110 (2%)
Query: 369 SKIFKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN 425
S+ KSC+ +L++L KH W F PVD + LGLHDY II+ PMDLGTVKT+++
Sbjct: 390 SEALKSCNDILKELFAKKHSPYAWPFYKPVDAELLGLHDYHEIIKKPMDLGTVKTKMDNR 449
Query: 426 WYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
YK+ EFA DVRL F N YNP DV MA +L IFE ++ + E
Sbjct: 450 QYKTAHEFASDVRLIFTNCYKYNPPDHDVVSMARKLQDIFEMRYAKVPDE 499
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 57/99 (57%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
+L+ + KH+ W F PVD K L L DY II+ PMDLGT+K RL ++Y S KE +D
Sbjct: 59 GVLKPVWKHQFAWPFQQPVDAKKLNLPDYHKIIKKPMDLGTIKKRLENSYYWSGKECIQD 118
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
F N YN G+DV +MA+ L K+F K + E
Sbjct: 119 FNTMFTNCYVYNKPGEDVVVMAQALEKLFLTKVAQMPKE 157
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWEL 608
+ M+YDEK++LS ++ LP +KL +V II+ R SL + DEIE+D +++ TL EL
Sbjct: 715 KPMSYDEKRQLSLDINKLPGDKLGRVVHIIQSREPSLRDSNPDEIEIDFETLKPSTLREL 774
Query: 609 DRFVTN 614
+ +V +
Sbjct: 775 ESYVAS 780
>gi|384486789|gb|EIE78969.1| hypothetical protein RO3G_03674 [Rhizopus delemar RA 99-880]
Length = 489
Score = 112 bits (280), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 94/302 (31%), Positives = 147/302 (48%), Gaps = 61/302 (20%)
Query: 365 FGTGS-KIFKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKT 420
F T S K+ K C +++L K K+ + F PVD L + DY TI++HPMDL T++T
Sbjct: 181 FTTASSKVMKYCLQTVKELKKQKYKHLSFPFLYPVDPVALNIPDYPTIVKHPMDLSTIET 240
Query: 421 RLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWV-----VIESE 475
+LN+N Y SP FA D++L F N YNP ++ +A+QL IF++KW VIE +
Sbjct: 241 KLNRNEYDSPDAFAADIKLMFDNCYLYNPPHLPIYDLAKQLQAIFDEKWAQRPTEVIEEQ 300
Query: 476 YNREMRIG----------ADYEMGFHTPTSRKAPPLPPPLDMRRILDRSESITHPMDSRL 525
++ RI E+ H T I + ESI +
Sbjct: 301 PAKKRRISKVNRANQEDVTIAELERHIAT---------------ISQQIESIKSSSSKKS 345
Query: 526 KPISTTPSSRTPAPKKPKA---------KDPHKRDMTYDE---------KQKLSTNLQSL 567
TT P+P K + + R+M+ DE K++LS ++ +L
Sbjct: 346 PKKRTT----RPSPAKKETGTPPKKKKKRMTKYREMSSDEEDSGFTFEQKRQLSESINNL 401
Query: 568 PSEKLDNIVQIIKKRNSSLFQ-HDDEIEVDIDSVDAETLWELDRFV----TNYKKSLSKN 622
++L+ +V II+ +L ++EIE+DIDS+D TL L+ +V T K +L+KN
Sbjct: 402 TGDQLNEVVDIIRSSMPNLDSVGEEEIELDIDSLDINTLTRLNDYVKSRNTVQKGTLAKN 461
Query: 623 KR 624
++
Sbjct: 462 RK 463
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 62/137 (45%), Gaps = 10/137 (7%)
Query: 330 NSEFLLAKDKFPPAESNKKSKLNGKKQAGNELAHGFGTGSKIFKSCSALLEKLMKHKHGW 389
N F A D P S K+ + G G K C+A++ L KH+
Sbjct: 6 NQTFKSAADTLPSPPSQKQLSITG----------GRPMTKDQMKYCAAIMRNLKKHRDAA 55
Query: 390 VFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNP 449
F PVD L + DY +I+ P+DL + +LN+N Y + +F DVRL F+N YN
Sbjct: 56 PFLNPVDYIKLNVPDYPQVIKRPIDLTLIDQKLNQNEYVTVDDFVADVRLVFNNCFKYNG 115
Query: 450 KGQDVHIMAEQLLKIFE 466
+ ++ + + FE
Sbjct: 116 PEAMISVLCQNVESAFE 132
>gi|125553971|gb|EAY99576.1| hypothetical protein OsI_21551 [Oryza sativa Indica Group]
gi|125595985|gb|EAZ35765.1| hypothetical protein OsJ_20055 [Oryza sativa Japonica Group]
Length = 344
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 84/276 (30%), Positives = 130/276 (47%), Gaps = 42/276 (15%)
Query: 387 HGWV--FNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL---NKNWYKSPKEFAEDVRLTF 441
H W F PVDV L L DY+ II PMD T++ ++ + N Y + +E DVRL F
Sbjct: 90 HEWAEPFLKPVDVVGLQLDDYYKIITKPMDFSTIQKKMEGKDDNKYNNVREIYSDVRLIF 149
Query: 442 HNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEMGFHTPTSRKAPP- 500
NAM YN + DVHIMA+ LL+ FE+KW+ + + E R D E S P
Sbjct: 150 ANAMKYNDERHDVHIMAKSLLEKFEEKWLQLLPKVENEERKQKDEE-------SNGVPKV 202
Query: 501 -LPPPLDMRRILDRSESITHPMDSRLKPISTTPSSRTPAPKKPKAKDPHKRDMTYDEKQK 559
+ P + ++ +++ ++ +L+ + + R MT EK+K
Sbjct: 203 NISPEEAIAKLAKDTDNELIEINKQLEELRQMVVQKC-------------RKMTTYEKRK 249
Query: 560 LSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWELDRFVTNYKKSL 619
L L L E+L ++++ + N S DE+E+D+D+ TLW L FV +++L
Sbjct: 250 LGAGLCHLSPEELTKALEMVAQDNPSFEAKGDELELDMDAQSETTLWRLKFFV---REAL 306
Query: 620 SKN------------KRKAELANQARAVAQQNVQQQ 643
+ KRK E+ N A + V+QQ
Sbjct: 307 ERQANVASGRTDENAKRKREICNALARTASKRVKQQ 342
>gi|357627183|gb|EHJ76955.1| putative bromodomain containing 3 [Danaus plexippus]
Length = 1323
Score = 112 bits (279), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 53/110 (48%), Positives = 66/110 (60%), Gaps = 3/110 (2%)
Query: 369 SKIFKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN 425
S KSC+ +L++L KH W F PVD + LGLHDYF II+ PMDLGTVK ++
Sbjct: 379 SDALKSCNEILKELFSKKHSGYAWPFYKPVDAELLGLHDYFDIIKKPMDLGTVKHNMDHR 438
Query: 426 WYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
YK+ EFA DVRL F N YNP DV MA +L +FE ++ I E
Sbjct: 439 AYKTAAEFAADVRLIFTNCYKYNPPDHDVVAMARKLQDVFEMRYAKIPDE 488
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 60/98 (61%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ + KHK W F+ PVD K L L DY II+ PMDLGT+K RL N+Y S +E +D
Sbjct: 71 VIKAVWKHKFAWPFHQPVDAKKLNLPDYHKIIKKPMDLGTIKKRLESNYYYSAQECIQDF 130
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
F N YN G+DV +MA+ L K+F ++ ++ E
Sbjct: 131 NTMFTNCYVYNKPGEDVVVMAQTLEKLFLNRIAQMDKE 168
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWEL 608
+ M+YDEK++LS ++ LP +KL +V II+ R SL + DEIE+D +++ TL +L
Sbjct: 662 KPMSYDEKRQLSLDINKLPGDKLGKVVHIIQNREPSLRDSNPDEIEIDFETLKPSTLRQL 721
Query: 609 DRFVTN 614
+ +V +
Sbjct: 722 ESYVAS 727
>gi|307213342|gb|EFN88794.1| Homeotic protein female sterile [Harpegnathos saltator]
Length = 1514
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 52/110 (47%), Positives = 68/110 (61%), Gaps = 3/110 (2%)
Query: 369 SKIFKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN 425
S+ K C+ +L++L KH W F PVD + LGLHDY II+ PMDLGTVK++++
Sbjct: 399 SEPLKCCNDILKELFSKKHSGYAWPFYKPVDAELLGLHDYHEIIKKPMDLGTVKSKMDNR 458
Query: 426 WYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
YK+ +EFA DVRL F N YNP DV MA +L IFE ++ I E
Sbjct: 459 EYKTAQEFASDVRLIFTNCYKYNPPDHDVVSMARKLQDIFEMRYAKIPDE 508
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 55/99 (55%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
+L+ + KH+ W F PVD K L L DY II PMDLGT+K RL +Y S KE +D
Sbjct: 69 GVLKPVWKHQFAWPFQQPVDAKKLNLPDYHKIIERPMDLGTIKKRLENTYYWSGKECIQD 128
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
F N YN G+DV +MA+ L K+F K + E
Sbjct: 129 FNTMFTNCYVYNKPGEDVVVMAQALEKLFLTKVAQMPKE 167
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWEL 608
+ M+YDEK++LS ++ LP +KL +V II+ R SL + DEIE+D +++ TL EL
Sbjct: 725 KPMSYDEKRQLSLDINKLPGDKLGRVVHIIQSREPSLRDSNPDEIEIDFETLKPSTLREL 784
Query: 609 DRFV 612
+ +V
Sbjct: 785 ESYV 788
>gi|242009661|ref|XP_002425601.1| Bromodomain-containing protein, putative [Pediculus humanus
corporis]
gi|212509494|gb|EEB12863.1| Bromodomain-containing protein, putative [Pediculus humanus
corporis]
Length = 803
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 51/107 (47%), Positives = 67/107 (62%), Gaps = 3/107 (2%)
Query: 369 SKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN 425
S+ KSC+ +L++L KH W F PVD + LGLHDY II+ PMDLGTVKT+++
Sbjct: 350 SESLKSCNEILKELFSRKHAGYAWPFYKPVDAELLGLHDYHEIIKKPMDLGTVKTKMDNR 409
Query: 426 WYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVI 472
Y++ EFA DVRL F N YNP DV MA +L +FE ++ I
Sbjct: 410 QYRTASEFAADVRLIFTNCYKYNPSTHDVVAMARKLQDVFEMRYAKI 456
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 54/98 (55%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ + HK+ W PVD K L L DY II+ PMDL T+K RL N+Y + KE +D
Sbjct: 64 VIKAVCAHKYAWPLLEPVDAKKLNLPDYHRIIKQPMDLTTIKKRLENNYYWNAKECIQDF 123
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
F N YN +DV +MA+ + K+F K + E
Sbjct: 124 NTMFTNCYVYNQPQEDVVVMAQIVEKLFLTKISTLPKE 161
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 48/77 (62%), Gaps = 4/77 (5%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWEL 608
R M+YDEK++LS ++ LP +KL +V II+ R SL + DEIE+D +++ TL EL
Sbjct: 644 RPMSYDEKRQLSLDINKLPGDKLGRVVHIIQSREPSLRDSNPDEIEIDFETLKPSTLREL 703
Query: 609 DRFVTNYKKSLSKNKRK 625
+ +V + L K RK
Sbjct: 704 EAYVAS---CLRKKPRK 717
>gi|241604623|ref|XP_002405922.1| bromodomain-containing protein 2, brd2, putative [Ixodes
scapularis]
gi|215502589|gb|EEC12083.1| bromodomain-containing protein 2, brd2, putative [Ixodes
scapularis]
Length = 885
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 52/113 (46%), Positives = 70/113 (61%), Gaps = 3/113 (2%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G ++ K C+++L++L KH W F PVD LGLHDY II+HPMDLGTVK ++
Sbjct: 391 GKLTEQMKYCNSILKELFAKKHAGYAWPFYKPVDADLLGLHDYHEIIKHPMDLGTVKQKM 450
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
+ YKSP+EFA DVRL F N YNP +V MA +L +FE ++ + E
Sbjct: 451 DNREYKSPEEFAGDVRLIFTNCYKYNPPDHEVVAMARKLQDVFEMRYAKMPDE 503
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 51/89 (57%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
+++ + KH+ W F PVD L L DY II HPMDLGT+K RL +Y S E +D
Sbjct: 45 VVMKAIWKHQFAWPFQQPVDTVRLNLPDYHRIIDHPMDLGTIKKRLENYYYASASECIQD 104
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIF 465
F N YN G+DV +MA+ L K+F
Sbjct: 105 FNTMFTNCYVYNKPGEDVVLMAQALEKLF 133
Score = 43.5 bits (101), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 36/61 (59%), Gaps = 4/61 (6%)
Query: 566 SLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWELDRFVTNYKKSLSKNKR 624
SLP +KL +V II+ R SL + DEIE+D +++ TL EL+ +V + L K R
Sbjct: 737 SLPCDKLGRVVHIIQSREPSLRDSNPDEIEIDFETLKPSTLRELESYVAS---CLRKKPR 793
Query: 625 K 625
K
Sbjct: 794 K 794
>gi|224109720|ref|XP_002315289.1| global transcription factor group [Populus trichocarpa]
gi|222864329|gb|EEF01460.1| global transcription factor group [Populus trichocarpa]
Length = 318
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 122/267 (45%), Gaps = 47/267 (17%)
Query: 359 NELAHGFGTGSKIFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTV 418
EL FGT +L ++ +HK W F PVDVK L LHDY+ +I PMD T+
Sbjct: 85 QELMRQFGT----------ILRQITQHKWAWPFMQPVDVKGLRLHDYYEVIDKPMDFSTI 134
Query: 419 KTRL---NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVI--- 472
K ++ + YK+ +E + DVRL F NAM YN + DVH+MA+ LL FE+KW+ +
Sbjct: 135 KNQMEAKDGTGYKNVREISADVRLVFKNAMKYNDERSDVHVMAKTLLGKFEEKWLQLLPK 194
Query: 473 -----ESEYNREMRIGADYEMGFHTPTSRKAPPLPPPLDMRRILDRSESITHPMDSRLKP 527
+ + E+ D ++ ++ A L L + +D L+
Sbjct: 195 VTEEEKRREDEEVEAKLDMQLAQEAAHAKMARDLSNEL-------------YEVDMHLEE 241
Query: 528 ISTTPSSRTPAPKKPKAKDPHKRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLF 587
+ + R M+ +EK+KL L L E L ++I+ + N
Sbjct: 242 LRDIVVQKC-------------RKMSTEEKRKLGVALTRLSPEDLTKALEIVARSNPGFQ 288
Query: 588 QHDDEIEVDIDSVDAETLWELDRFVTN 614
+E+++DID+ TLW L V +
Sbjct: 289 ATAEEVDLDIDAQTESTLWRLKFLVKD 315
>gi|213983065|ref|NP_001135690.1| bromodomain containing 4 [Xenopus (Silurana) tropicalis]
gi|197245689|gb|AAI68637.1| Unknown (protein for MGC:186343) [Xenopus (Silurana) tropicalis]
Length = 1364
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 67/106 (63%), Gaps = 5/106 (4%)
Query: 369 SKIFKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN 425
S+ + C+ ++ ++ KH W F PVDV LGLHDY II+HPMDLGT+K +++ N
Sbjct: 376 SEQLRYCAGIIREMFSKKHQAYAWPFYKPVDVDALGLHDYREIIKHPMDLGTIKVKMD-N 434
Query: 426 W-YKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWV 470
W YK KEFA DVRL F N YNP +V IMA +L +FE ++
Sbjct: 435 WDYKDAKEFASDVRLMFSNCYKYNPPDHEVVIMARKLQDVFEMRYA 480
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 55/91 (60%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+L+ L KH+ W F PVDV L L DY II++PMD+GT+K RL ++Y + +E +D
Sbjct: 72 VLKTLWKHQFAWPFQLPVDVVKLNLPDYHKIIKNPMDMGTIKKRLENHYYWNAQECIQDF 131
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN G D+ +MAE L K+F K
Sbjct: 132 NTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 162
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 51/79 (64%), Gaps = 5/79 (6%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLF-QHDDEIEVDIDSVDAETLWEL 608
R M+Y+EK++LS ++ LP EKL +V II+ R SL + DEIE+D +++ TL EL
Sbjct: 641 RPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLREL 700
Query: 609 DRFVTNYKKSLSKNKRKAE 627
+R+VT S + KRK +
Sbjct: 701 ERYVT----SCLRKKRKPQ 715
>gi|432868098|ref|XP_004071410.1| PREDICTED: uncharacterized protein LOC101158947 [Oryzias latipes]
Length = 1443
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 84/173 (48%), Gaps = 15/173 (8%)
Query: 344 ESNKKSKLNGKKQAGNELAHGFGTGSKI------------FKSCSALLEKLMKHKHG--- 388
ES + +KL K ++ G GTG C+AL+ +++ KH
Sbjct: 317 ESTRPTKLMKKDAPDSQHHIGMGTGLGSSSGGLSPRPQDQLGYCAALVREMLSKKHAAYA 376
Query: 389 WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYN 448
W F PVDV LGLHDY II+HPMDL T+K +L Y+ P+EFA DVRL F N YN
Sbjct: 377 WPFYKPVDVDALGLHDYHDIIKHPMDLSTIKAKLENRQYRDPQEFAADVRLMFSNCYKYN 436
Query: 449 PKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEMGFHTPTSRKAPPL 501
P +V MA +L +FE ++ + E + + H + PP+
Sbjct: 437 PPDHEVVAMARKLQDVFEMRFAKMPDEPESKHVVSVPPPSLHHPAPVKPQPPM 489
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 54/92 (58%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
+++ L KH W F APVD L L DY+TII PMDLGT+K RL ++Y + +E +D
Sbjct: 48 VVVKALWKHHFSWPFQAPVDAIKLNLPDYYTIIHTPMDLGTIKKRLENSYYWNAQECIQD 107
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN G D+ +MAE L K+F K
Sbjct: 108 FNTMFTNCYIYNKPGDDIVLMAEALEKVFLQK 139
>gi|162135989|ref|NP_001085290.1| uncharacterized protein LOC443648 [Xenopus laevis]
gi|115313740|gb|AAI23909.1| LOC443648 protein [Xenopus laevis]
gi|159507463|gb|ABW97744.1| bromodomain 4 [Xenopus laevis]
Length = 1351
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 48/110 (43%), Positives = 68/110 (61%), Gaps = 3/110 (2%)
Query: 369 SKIFKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN 425
S+ + C++++ ++ KH W F PVDV+ LGLHDY II+HPMDLGT+K ++
Sbjct: 369 SEQLRYCASIIREMFSKKHQAYAWPFYKPVDVEALGLHDYCEIIKHPMDLGTIKVKMENR 428
Query: 426 WYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
YK +EFA DVRL F N YNP +V IMA +L +FE ++ + E
Sbjct: 429 DYKEAQEFASDVRLMFSNCYKYNPPDHEVVIMARKLQDVFEMRFAKMPDE 478
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 55/92 (59%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
A+L+ L KH+ W F PVDV L L DY II+ PMD+GT+K RL ++Y + +E +D
Sbjct: 69 AVLKTLWKHQFAWPFQLPVDVVKLNLPDYHKIIKTPMDMGTIKKRLENHYYWNAQECIQD 128
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN G D+ +MAE L K+F K
Sbjct: 129 FNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 52/79 (65%), Gaps = 5/79 (6%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLF-QHDDEIEVDIDSVDAETLWEL 608
R M+Y+EK++LS ++ LP EKL +V II+ R SL + DEIE+D +++ TL EL
Sbjct: 634 RPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLREL 693
Query: 609 DRFVTNYKKSLSKNKRKAE 627
+R+VT S + KRK++
Sbjct: 694 ERYVT----SCLRKKRKSQ 708
>gi|47210026|emb|CAF90901.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1594
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 74/132 (56%), Gaps = 3/132 (2%)
Query: 372 FKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
+ C+ L+ +++ KH W F PVDV +LGLHDY+ II+HPMDL T+K +++ Y+
Sbjct: 745 LRFCARLVREMLSRKHASYAWPFYKPVDVTSLGLHDYYDIIKHPMDLSTIKKKMDSRQYR 804
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEM 488
+EFA DVRL F N YNP DV MA L +FE ++ + + + +
Sbjct: 805 DAQEFAADVRLMFSNCYKYNPPDHDVVSMARNLQDVFEMRFAKMPDDPEEAVPVPTPSSA 864
Query: 489 GFHTPTSRKAPP 500
P++R+ PP
Sbjct: 865 LLPAPSTRQVPP 876
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 55/98 (56%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+L+ L KH W F APVD L L DY+ II+ PMD+GT+K RL N+Y + +E D
Sbjct: 467 VLKSLWKHHFAWPFQAPVDAVKLNLPDYYKIIKTPMDMGTIKRRLENNYYWNAQECIHDF 526
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
F N YN G D+ +MAE L K+F K + E
Sbjct: 527 NTMFTNCYIYNKPGDDIVLMAEALEKVFLQKITEMPQE 564
>gi|449674634|ref|XP_002169264.2| PREDICTED: bromodomain-containing protein 4-like [Hydra
magnipapillata]
Length = 1019
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/116 (43%), Positives = 68/116 (58%), Gaps = 3/116 (2%)
Query: 372 FKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
K C+ L+++++ KH W F PV + LGLHDYF II+ PMDLGTVK +++ Y
Sbjct: 302 LKYCNMLIKEMLSKKHEAYAWPFYKPVQAEALGLHDYFDIIKKPMDLGTVKFKMDCREYS 361
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGA 484
SP +FA DVRL F N YNP DV MA +L +FE K+ + E + I A
Sbjct: 362 SPSDFATDVRLIFTNCYKYNPPDHDVVKMARKLQDVFEYKFAKMPDELCSPVAISA 417
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 67/124 (54%), Gaps = 1/124 (0%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
++ ++ +H+ W F PVD L + DY+ I + PMD GT+K +L N Y KE E+
Sbjct: 26 VMRQIQRHQFAWPFAKPVDAVKLKIPDYYEITKRPMDFGTIKKKLEHNDYTCAKECIEEF 85
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEMGFHTPTSRK 497
+L F N YN G+D+ IMAE L K F++K ++ E E+ GA + T TS
Sbjct: 86 KLVFTNCYGYNKPGEDIVIMAEVLEKFFDEKLSMMPPE-EYEIIKGAKTVVKAATSTSES 144
Query: 498 APPL 501
P+
Sbjct: 145 GEPV 148
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 48/70 (68%), Gaps = 1/70 (1%)
Query: 544 AKDPHKRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDA 602
++D R MTYDEK++LS ++ LP +KL +V II+ + SL ++ DEIE+D +++
Sbjct: 541 SEDEEIRAMTYDEKRQLSLDINKLPGDKLGKVVHIIQSKEPSLKGNNPDEIEIDFETLKP 600
Query: 603 ETLWELDRFV 612
TL EL+++V
Sbjct: 601 ATLRELEKYV 610
>gi|198469092|ref|XP_002134216.1| GA26201 [Drosophila pseudoobscura pseudoobscura]
gi|198146712|gb|EDY72843.1| GA26201 [Drosophila pseudoobscura pseudoobscura]
Length = 1981
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 52/110 (47%), Positives = 65/110 (59%), Gaps = 3/110 (2%)
Query: 369 SKIFKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN 425
S KSC+ +L++L KH W F PVD + LGLHDY II+ PMDLGTVK +++
Sbjct: 484 SDALKSCNEILKELFSKKHSGYAWPFYKPVDAEMLGLHDYHDIIKKPMDLGTVKRKMDNR 543
Query: 426 WYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
YKS EFA DVRL F N YNP DV M +L +FE ++ I E
Sbjct: 544 EYKSAPEFAADVRLIFTNCYKYNPPDHDVVAMGRKLQDVFEMRYANIPDE 593
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 60/105 (57%), Gaps = 3/105 (2%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ + KH W F PVD K L L DY II+ PMD+GT+K RL N+Y S KE D
Sbjct: 46 VMKMIWKHHFAWPFQQPVDAKKLNLPDYHKIIKQPMDMGTIKKRLENNYYWSAKETIHDF 105
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRI 482
F+N YN G+DV +MA+ L K+F K IE+ E+ +
Sbjct: 106 NTMFNNCYVYNKPGEDVVVMAQTLEKVFLQK---IETMPKEELEL 147
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 53/92 (57%), Gaps = 8/92 (8%)
Query: 529 STTPSSRTPAPKKPKA-------KDPHKRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKK 581
+T +R + KKP ++ + M+YDEK++LS ++ LP +KL +V II+
Sbjct: 923 ATGAGARGSSKKKPSQVMNFDSEEEDTAKPMSYDEKRQLSLDINKLPGDKLGRVVHIIQN 982
Query: 582 RNSSLFQHD-DEIEVDIDSVDAETLWELDRFV 612
R SL + DEIE+D +++ TL EL+ +V
Sbjct: 983 REPSLRDSNPDEIEIDFETLKPSTLRELESYV 1014
>gi|195480258|ref|XP_002101200.1| GE17489 [Drosophila yakuba]
gi|194188724|gb|EDX02308.1| GE17489 [Drosophila yakuba]
Length = 2036
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 52/110 (47%), Positives = 65/110 (59%), Gaps = 3/110 (2%)
Query: 369 SKIFKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN 425
S KSC+ +L++L KH W F PVD + LGLHDY II+ PMDLGTVK +++
Sbjct: 477 SDALKSCNEILKELFSKKHSGYAWPFYKPVDAEMLGLHDYHDIIKKPMDLGTVKRKMDNR 536
Query: 426 WYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
YKS EFA DVRL F N YNP DV M +L +FE ++ I E
Sbjct: 537 EYKSAPEFAADVRLIFTNCYKYNPPDHDVVAMGRKLQDVFEMRYANIPDE 586
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 60/105 (57%), Gaps = 3/105 (2%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ + KH W F PVD K L L DY II+ PMD+GT+K RL N+Y S KE D
Sbjct: 46 VMKVIWKHHFSWPFQQPVDAKKLNLPDYHKIIKQPMDMGTIKKRLENNYYWSAKETIHDF 105
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRI 482
F+N YN G+DV +MA+ L K+F K IES E+ +
Sbjct: 106 NTMFNNCYVYNKPGEDVVVMAQTLEKVFLQK---IESMPKEELEL 147
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 48/77 (62%), Gaps = 4/77 (5%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWEL 608
+ M+YDEK++LS ++ LP +KL +V II+ R SL + DEIE+D +++ TL EL
Sbjct: 947 KPMSYDEKRQLSLDINKLPGDKLGRVVHIIQNREPSLRDSNPDEIEIDFETLKPSTLREL 1006
Query: 609 DRFVTNYKKSLSKNKRK 625
+ +V + L K RK
Sbjct: 1007 ESYVAS---CLRKKTRK 1020
>gi|442615454|ref|NP_001259321.1| female sterile (1) homeotic, isoform G [Drosophila melanogaster]
gi|440216522|gb|AGB95166.1| female sterile (1) homeotic, isoform G [Drosophila melanogaster]
Length = 2046
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 52/110 (47%), Positives = 65/110 (59%), Gaps = 3/110 (2%)
Query: 369 SKIFKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN 425
S KSC+ +L++L KH W F PVD + LGLHDY II+ PMDLGTVK +++
Sbjct: 478 SDALKSCNEILKELFSKKHSGYAWPFYKPVDAEMLGLHDYHDIIKKPMDLGTVKRKMDNR 537
Query: 426 WYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
YKS EFA DVRL F N YNP DV M +L +FE ++ I E
Sbjct: 538 EYKSAPEFAADVRLIFTNCYKYNPPDHDVVAMGRKLQDVFEMRYANIPDE 587
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 61/105 (58%), Gaps = 3/105 (2%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ + KH W F PVD K L L DY II+ PMD+GT+K RL N+Y S KE +D
Sbjct: 46 VMKVIWKHHFSWPFQQPVDAKKLNLPDYHKIIKQPMDMGTIKKRLENNYYWSAKETIQDF 105
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRI 482
F+N YN G+DV +MA+ L K+F K IES E+ +
Sbjct: 106 NTMFNNCYVYNKPGEDVVVMAQTLEKVFLQK---IESMPKEELEL 147
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWEL 608
+ M+YDEK++LS ++ LP +KL +V II+ R SL + DEIE+D +++ TL EL
Sbjct: 950 KPMSYDEKRQLSLDINKLPGDKLGRVVHIIQNREPSLRDSNPDEIEIDFETLKPSTLREL 1009
Query: 609 DRFV 612
+ +V
Sbjct: 1010 ESYV 1013
>gi|194897170|ref|XP_001978604.1| GG17589 [Drosophila erecta]
gi|190650253|gb|EDV47531.1| GG17589 [Drosophila erecta]
Length = 2024
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 52/110 (47%), Positives = 65/110 (59%), Gaps = 3/110 (2%)
Query: 369 SKIFKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN 425
S KSC+ +L++L KH W F PVD + LGLHDY II+ PMDLGTVK +++
Sbjct: 475 SDALKSCNEILKELFSKKHSGYAWPFYKPVDAEMLGLHDYHDIIKKPMDLGTVKRKMDNR 534
Query: 426 WYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
YKS EFA DVRL F N YNP DV M +L +FE ++ I E
Sbjct: 535 EYKSAPEFAADVRLIFTNCYKYNPPDHDVVAMGRKLQDVFEMRYANIPDE 584
Score = 95.5 bits (236), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 60/105 (57%), Gaps = 3/105 (2%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ + KH W F PVD K L L DY II+ PMD+GT+K RL N+Y S KE D
Sbjct: 46 VMKVIWKHHFSWPFQQPVDAKKLNLPDYHKIIKQPMDMGTIKKRLENNYYWSAKETIHDF 105
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRI 482
F+N YN G+DV +MA+ L K+F K IES E+ +
Sbjct: 106 NTMFNNCYVYNKPGEDVVVMAQTLEKVFLQK---IESMPKEELEL 147
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 49/74 (66%), Gaps = 3/74 (4%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWEL 608
+ M+YDEK++LS ++ LP +KL +V II+ R SL + DEIE+D +++ TL EL
Sbjct: 945 KPMSYDEKRQLSLDINKLPGDKLGRVVHIIQNREPSLRDSNPDEIEIDFETLKPSTLREL 1004
Query: 609 DRFVTNY--KKSLS 620
+ +V + KK++S
Sbjct: 1005 ESYVASCLRKKTVS 1018
>gi|157453|gb|AAA28540.1| 7.6 kb fsh membrane protein [Drosophila melanogaster]
Length = 2038
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 52/110 (47%), Positives = 65/110 (59%), Gaps = 3/110 (2%)
Query: 369 SKIFKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN 425
S KSC+ +L++L KH W F PVD + LGLHDY II+ PMDLGTVK +++
Sbjct: 478 SDALKSCNEILKELFSKKHSGYAWPFYKPVDAEMLGLHDYHDIIKKPMDLGTVKRKMDNR 537
Query: 426 WYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
YKS EFA DVRL F N YNP DV M +L +FE ++ I E
Sbjct: 538 EYKSAPEFAADVRLIFTNCYKYNPPDHDVVAMGRKLQDVFEMRYANIPDE 587
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 61/105 (58%), Gaps = 3/105 (2%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ + KH W F PVD K L L DY II+ PMD+GT+K RL N+Y S KE +D
Sbjct: 46 VMKVIWKHHFSWPFQQPVDAKKLNLPDYHKIIKQPMDMGTIKKRLENNYYWSAKETIQDF 105
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRI 482
F+N YN G+DV +MA+ L K+F K IES E+ +
Sbjct: 106 NTMFNNCYVYNKPGEDVVVMAQTLEKVFLQK---IESMPKEELEL 147
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWEL 608
+ M+YDEK++LS ++ LP +KL +V II+ R SL + DEIE+D +++ TL EL
Sbjct: 950 KPMSYDEKRQLSLDINKLPGDKLGRVVHIIQNREPSLRDSNPDEIEIDFETLKPSTLREL 1009
Query: 609 DRFV 612
+ +V
Sbjct: 1010 ESYV 1013
>gi|24640482|ref|NP_511078.2| female sterile (1) homeotic, isoform B [Drosophila melanogaster]
gi|68067442|sp|P13709.2|FSH_DROME RecName: Full=Homeotic protein female sterile; AltName:
Full=Fragile-chorion membrane protein
gi|22831925|gb|AAF46312.3| female sterile (1) homeotic, isoform B [Drosophila melanogaster]
Length = 2038
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 52/110 (47%), Positives = 65/110 (59%), Gaps = 3/110 (2%)
Query: 369 SKIFKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN 425
S KSC+ +L++L KH W F PVD + LGLHDY II+ PMDLGTVK +++
Sbjct: 478 SDALKSCNEILKELFSKKHSGYAWPFYKPVDAEMLGLHDYHDIIKKPMDLGTVKRKMDNR 537
Query: 426 WYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
YKS EFA DVRL F N YNP DV M +L +FE ++ I E
Sbjct: 538 EYKSAPEFAADVRLIFTNCYKYNPPDHDVVAMGRKLQDVFEMRYANIPDE 587
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 61/105 (58%), Gaps = 3/105 (2%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ + KH W F PVD K L L DY II+ PMD+GT+K RL N+Y S KE +D
Sbjct: 46 VMKVIWKHHFSWPFQQPVDAKKLNLPDYHKIIKQPMDMGTIKKRLENNYYWSAKETIQDF 105
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRI 482
F+N YN G+DV +MA+ L K+F K IES E+ +
Sbjct: 106 NTMFNNCYVYNKPGEDVVVMAQTLEKVFLQK---IESMPKEELEL 147
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWEL 608
+ M+YDEK++LS ++ LP +KL +V II+ R SL + DEIE+D +++ TL EL
Sbjct: 950 KPMSYDEKRQLSLDINKLPGDKLGRVVHIIQNREPSLRDSNPDEIEIDFETLKPSTLREL 1009
Query: 609 DRFV 612
+ +V
Sbjct: 1010 ESYV 1013
>gi|195457098|ref|XP_002075425.1| GK15212 [Drosophila willistoni]
gi|194171510|gb|EDW86411.1| GK15212 [Drosophila willistoni]
Length = 2114
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 52/110 (47%), Positives = 65/110 (59%), Gaps = 3/110 (2%)
Query: 369 SKIFKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN 425
S KSC+ +L++L KH W F PVD + LGLHDY II+ PMDLGTVK +++
Sbjct: 524 SDALKSCNEILKELFSKKHSGYAWPFYKPVDAELLGLHDYHDIIKKPMDLGTVKRKMDNR 583
Query: 426 WYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
YKS EFA DVRL F N YNP DV M +L +FE ++ I E
Sbjct: 584 EYKSAPEFAADVRLIFTNCYKYNPPDHDVVAMGRKLQDVFEMRYANIPDE 633
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 60/105 (57%), Gaps = 3/105 (2%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ + KH W F PVD K L L DY II+ PMD+GT+K RL N+Y S KE D
Sbjct: 87 VMKVIWKHHFSWPFQQPVDAKKLNLPDYHKIIKQPMDMGTIKKRLENNYYWSAKEAILDF 146
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRI 482
F+N YN G+DV +MA+ L K+F K IES E+ +
Sbjct: 147 NTMFNNCYVYNKPGEDVVVMAQTLEKVFLQK---IESMPKEELEL 188
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWEL 608
+ M+YDEK++LS ++ LP +KL +V II+ R SL + DEIE+D +++ TL EL
Sbjct: 988 KPMSYDEKRQLSLDINKLPGDKLGRVVHIIQNREPSLRDSNPDEIEIDFETLKPSTLREL 1047
Query: 609 DRFV 612
+ +V
Sbjct: 1048 ESYV 1051
>gi|195355783|ref|XP_002044367.1| GM11218 [Drosophila sechellia]
gi|194130685|gb|EDW52728.1| GM11218 [Drosophila sechellia]
Length = 1272
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 52/110 (47%), Positives = 65/110 (59%), Gaps = 3/110 (2%)
Query: 369 SKIFKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN 425
S KSC+ +L++L KH W F PVD + LGLHDY II+ PMDLGTVK +++
Sbjct: 480 SDALKSCNEILKELFSKKHSGYAWPFYKPVDAEMLGLHDYHDIIKKPMDLGTVKRKMDNR 539
Query: 426 WYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
YKS EFA DVRL F N YNP DV M +L +FE ++ I E
Sbjct: 540 EYKSAPEFAADVRLIFTNCYKYNPPDHDVVAMGRKLQDVFEMRYANIPDE 589
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 61/105 (58%), Gaps = 3/105 (2%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ + KH W F PVD K L L DY II+ PMD+GT+K RL N+Y S KE +D
Sbjct: 46 VMKVIWKHHFSWPFQQPVDAKKLNLPDYHKIIKQPMDMGTIKKRLENNYYWSAKETIQDF 105
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRI 482
F+N YN G+DV +MA+ L K+F K IES E+ +
Sbjct: 106 NTMFNNCYVYNKPGEDVVVMAQTLEKVFLQK---IESMPKEELEL 147
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 48/77 (62%), Gaps = 4/77 (5%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWEL 608
+ M+YDEK++LS ++ LP +KL +V II+ R SL + DEIE+D +++ TL EL
Sbjct: 899 KPMSYDEKRQLSLDINKLPGDKLGRVVHIIQNREPSLRDSNPDEIEIDFETLKPSTLREL 958
Query: 609 DRFVTNYKKSLSKNKRK 625
+ +V + L K RK
Sbjct: 959 ESYVAS---CLRKKTRK 972
>gi|330414421|gb|AEC13624.1| bromodomain containing protein 2 [Ginglymostoma cirratum]
gi|339895692|dbj|BAK52515.1| bromodomain containing 2 [Ginglymostoma cirratum]
Length = 783
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 69/113 (61%), Gaps = 3/113 (2%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G S+ K C+ +L++L+ KH W F PVD K LGLHDY II+HPMDL T+K ++
Sbjct: 351 GKLSEQLKYCNGILKELLSKKHAAYAWPFYKPVDAKALGLHDYHDIIKHPMDLSTIKRKM 410
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
++ Y+ +EFA DVRL F N YNP DV MA +L +FE ++ + E
Sbjct: 411 DEREYQDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRFAKMPDE 463
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 51/92 (55%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
L++ L KH+ W F PVD L L DY II+ PMD+GT+K RL N+Y S E +D
Sbjct: 95 VLMKALWKHQFAWPFYQPVDAVKLSLPDYHKIIKQPMDMGTIKKRLENNYYWSASECMQD 154
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN D+ +MA+ L K+F K
Sbjct: 155 FNTMFTNCYIYNKPTDDIVLMAQTLEKLFLQK 186
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 51/84 (60%), Gaps = 4/84 (4%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWEL 608
R MTYDEK++LS ++ LP +KL +V II+ R SL + DEIE+D +++ TL EL
Sbjct: 622 RPMTYDEKRQLSLDINKLPGDKLGRVVHIIQSREPSLRDSNPDEIEIDFETLKPSTLREL 681
Query: 609 DRFVTNYKKSLSKNKRKAELANQA 632
+R+V + L K RK QA
Sbjct: 682 ERYVMS---CLRKKPRKPYSKKQA 702
>gi|348690450|gb|EGZ30264.1| hypothetical protein PHYSODRAFT_310264 [Phytophthora sojae]
Length = 1333
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 135/267 (50%), Gaps = 27/267 (10%)
Query: 372 FKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPK 431
K C ++L+ LM + F PVD LG+ DYF +I+ PMDLGT+++ L +Y +P
Sbjct: 333 MKKCLSILKGLMSNPKSAPFLVPVDPVALGIPDYFHVIKEPMDLGTIRSNLETGFYDTPS 392
Query: 432 EFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIG-----ADY 486
FAE VRL F NAM YN VHI A +L+ FE ++ + + + + ++ D
Sbjct: 393 AFAEHVRLVFRNAMLYNAAHSQVHIYARKLMDDFERRFKSLNVKLSTKCKLSDPKSKKDQ 452
Query: 487 EMGFHTPTSRK----------------APPLPPPLDMRRILDRSESITHPMD-SRLKPIS 529
+ G T +S+K + ++ ++R ++ + S K ++
Sbjct: 453 KAG-GTHSSKKIRGGKGTKGNTKRQSSGDDTGLIMSLKEDIERLKATLEQLQPSMAKAVA 511
Query: 530 TTPSSRTPAPKKPK--AKDPHKRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKR--NSS 585
+ P+ P K + ++ M+ +K +LS++++ LP +K++ ++QII + +
Sbjct: 512 SKPTKAAARPFKMEDLTEEELNEPMSQMDKARLSSDIKLLPQDKINRVLQIIAEAVPVAK 571
Query: 586 LFQHDDEIEVDIDSVDAETLWELDRFV 612
L +DE+E+DI++ D L L+ +V
Sbjct: 572 LANENDEVELDINAFDTRCLRMLEGYV 598
>gi|325190099|emb|CCA24581.1| histone acetyltransferase putative [Albugo laibachii Nc14]
Length = 2117
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 72/106 (67%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
LL+ +M+HK GWVF++PVD L + DYF IR PMDLGT+K +L+ +YK + FA D
Sbjct: 1099 VLLKGMMEHKFGWVFSSPVDTVALEIPDYFRTIRRPMDLGTIKKKLDLGFYKHIQHFASD 1158
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRI 482
VRLTF+NA YN +G DVH +A+ +L F ++ +E + N + R+
Sbjct: 1159 VRLTFNNAKLYNSEGSDVHNLAKDMLNDFNVEFRKLEIDINEQERL 1204
>gi|328703281|ref|XP_001944541.2| PREDICTED: hypothetical protein LOC100164694 [Acyrthosiphon pisum]
Length = 1162
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 51/100 (51%), Positives = 63/100 (63%), Gaps = 3/100 (3%)
Query: 372 FKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
K C+ +L++L KH W F PVD LGLHDY II+ PMDLGTVKT+L+ YK
Sbjct: 343 LKGCTEVLKELFTKKHAAYAWPFYKPVDAAWLGLHDYHDIIKKPMDLGTVKTKLDNREYK 402
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
+ K+FA DV L F N YNPK DV MA++L +FE K
Sbjct: 403 NSKDFAADVNLIFSNCYKYNPKDHDVVAMAKKLQAVFEAK 442
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 54/88 (61%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+H W F PVD L L DY +I+ PMDLGTVK RL N+Y E +D+
Sbjct: 80 VMKALWKHQHAWPFYQPVDASKLNLPDYHKVIKTPMDLGTVKKRLENNYYWCADECIQDI 139
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIF 465
F N TYN G+DV +MA+ L KIF
Sbjct: 140 NAMFSNCYTYNKPGEDVVLMAQTLEKIF 167
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 48/77 (62%), Gaps = 4/77 (5%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWEL 608
+ M+YDEK++LS ++ LP +KL +V II+ R SL + DEIE+D +++ TL EL
Sbjct: 646 KPMSYDEKRQLSLDINKLPGDKLGRVVHIIQSREPSLRDSNPDEIEIDFETLKPSTLREL 705
Query: 609 DRFVTNYKKSLSKNKRK 625
+ +V + L K RK
Sbjct: 706 ESYVAS---CLRKKPRK 719
>gi|427785339|gb|JAA58121.1| Putative bromodomain-containing protein 4 [Rhipicephalus
pulchellus]
Length = 1295
Score = 109 bits (272), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 52/130 (40%), Positives = 71/130 (54%), Gaps = 20/130 (15%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHG--------------------WVFNAPVDVKNLGLHDY 405
G ++ K C+++L++L KH W F PVD + LGLHDY
Sbjct: 359 GKLTEQMKYCNSILKELFAKKHAGPSLNARRPRRAQQPRPGYAWPFYKPVDAELLGLHDY 418
Query: 406 FTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIF 465
II+HPMDLGTVK +++ YKSP+EFA DVRL F N YNP +V MA +L +F
Sbjct: 419 HEIIKHPMDLGTVKQKMDNREYKSPEEFAGDVRLIFTNCYKYNPPDHEVVAMARKLQDVF 478
Query: 466 EDKWVVIESE 475
E ++ + E
Sbjct: 479 EMRYAKMPDE 488
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 57/98 (58%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ + KH+ W F PVD L L DY IIRHPMDLGT+K RL +Y S +E ED
Sbjct: 70 VMKAMWKHQFAWPFQQPVDTVKLNLPDYHRIIRHPMDLGTIKKRLEHCYYSSAQECIEDF 129
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
+ F N YN G+DV +MA+ L K+F K + E
Sbjct: 130 KTMFTNCYVYNKPGEDVVLMAQALEKLFLTKITEMPKE 167
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 48/77 (62%), Gaps = 4/77 (5%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLF-QHDDEIEVDIDSVDAETLWEL 608
+ M+YDEK++LS ++ LP +KL +V II+ R SL + DEIE+D +++ TL EL
Sbjct: 686 KPMSYDEKRQLSLDINKLPGDKLGRVVHIIQSREPSLRDSNPDEIEIDFETLKPSTLREL 745
Query: 609 DRFVTNYKKSLSKNKRK 625
+ +V + L K RK
Sbjct: 746 ESYVAS---CLRKKPRK 759
>gi|66912019|gb|AAH97528.1| LOC443648 protein, partial [Xenopus laevis]
Length = 572
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 48/110 (43%), Positives = 68/110 (61%), Gaps = 3/110 (2%)
Query: 369 SKIFKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN 425
S+ + C++++ ++ KH W F PVDV+ LGLHDY II+HPMDLGT+K ++
Sbjct: 369 SEQLRYCASIIREMFSKKHQAYAWPFYKPVDVEALGLHDYCEIIKHPMDLGTIKVKMENR 428
Query: 426 WYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
YK +EFA DVRL F N YNP +V IMA +L +FE ++ + E
Sbjct: 429 DYKEAQEFASDVRLMFSNCYKYNPPDHEVVIMARKLQDVFEMRFAKMPDE 478
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 55/92 (59%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
A+L+ L KH+ W F PVDV L L DY II+ PMD+GT+K RL ++Y + +E +D
Sbjct: 69 AVLKTLWKHQFAWPFQLPVDVVKLNLPDYHKIIKTPMDMGTIKKRLENHYYWNAQECIQD 128
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN G D+ +MAE L K+F K
Sbjct: 129 FNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
>gi|24640484|ref|NP_727228.1| female sterile (1) homeotic, isoform A [Drosophila melanogaster]
gi|45554398|ref|NP_996368.1| female sterile (1) homeotic, isoform E [Drosophila melanogaster]
gi|45554406|ref|NP_996369.1| female sterile (1) homeotic, isoform D [Drosophila melanogaster]
gi|45554416|ref|NP_996370.1| female sterile (1) homeotic, isoform C [Drosophila melanogaster]
gi|281360582|ref|NP_001162699.1| female sterile (1) homeotic, isoform F [Drosophila melanogaster]
gi|157455|gb|AAA28541.1| 5.9 kb fsh membrane protein [Drosophila melanogaster]
gi|22831926|gb|AAN09226.1| female sterile (1) homeotic, isoform A [Drosophila melanogaster]
gi|45446848|gb|AAS65277.1| female sterile (1) homeotic, isoform C [Drosophila melanogaster]
gi|45446849|gb|AAS65278.1| female sterile (1) homeotic, isoform D [Drosophila melanogaster]
gi|45446850|gb|AAS65279.1| female sterile (1) homeotic, isoform E [Drosophila melanogaster]
gi|51092171|gb|AAT94499.1| LD26482p [Drosophila melanogaster]
gi|220945958|gb|ACL85522.1| fs(1)h-PA [synthetic construct]
gi|272506027|gb|ACZ95234.1| female sterile (1) homeotic, isoform F [Drosophila melanogaster]
Length = 1110
Score = 108 bits (271), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 52/110 (47%), Positives = 65/110 (59%), Gaps = 3/110 (2%)
Query: 369 SKIFKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN 425
S KSC+ +L++L KH W F PVD + LGLHDY II+ PMDLGTVK +++
Sbjct: 478 SDALKSCNEILKELFSKKHSGYAWPFYKPVDAEMLGLHDYHDIIKKPMDLGTVKRKMDNR 537
Query: 426 WYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
YKS EFA DVRL F N YNP DV M +L +FE ++ I E
Sbjct: 538 EYKSAPEFAADVRLIFTNCYKYNPPDHDVVAMGRKLQDVFEMRYANIPDE 587
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 61/105 (58%), Gaps = 3/105 (2%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ + KH W F PVD K L L DY II+ PMD+GT+K RL N+Y S KE +D
Sbjct: 46 VMKVIWKHHFSWPFQQPVDAKKLNLPDYHKIIKQPMDMGTIKKRLENNYYWSAKETIQDF 105
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRI 482
F+N YN G+DV +MA+ L K+F K IES E+ +
Sbjct: 106 NTMFNNCYVYNKPGEDVVVMAQTLEKVFLQK---IESMPKEELEL 147
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 48/77 (62%), Gaps = 4/77 (5%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWEL 608
+ M+YDEK++LS ++ LP +KL +V II+ R SL + DEIE+D +++ TL EL
Sbjct: 950 KPMSYDEKRQLSLDINKLPGDKLGRVVHIIQNREPSLRDSNPDEIEIDFETLKPSTLREL 1009
Query: 609 DRFVTNYKKSLSKNKRK 625
+ +V + L K RK
Sbjct: 1010 ESYVAS---CLRKKTRK 1023
>gi|195130189|ref|XP_002009535.1| GI15407 [Drosophila mojavensis]
gi|193907985|gb|EDW06852.1| GI15407 [Drosophila mojavensis]
Length = 2056
Score = 108 bits (271), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 52/110 (47%), Positives = 65/110 (59%), Gaps = 3/110 (2%)
Query: 369 SKIFKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN 425
S KSC+ +L++L KH W F PVD + LGLHDY II+ PMDLGTVK +++
Sbjct: 505 SDALKSCNEILKELFSKKHSGYAWPFYKPVDAELLGLHDYHDIIKKPMDLGTVKRKMDNR 564
Query: 426 WYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
YKS EFA DVRL F N YNP DV M +L +FE ++ I E
Sbjct: 565 EYKSAPEFAADVRLIFTNCYKYNPPDHDVVAMGRKLQDVFEMRYANIPDE 614
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 59/105 (56%), Gaps = 3/105 (2%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ + KH W F PVD K L L DY II+ PMD+GT+K RL N+Y S KE D
Sbjct: 46 VMKVIWKHHFSWPFQQPVDAKKLNLPDYHKIIKQPMDMGTIKKRLENNYYWSAKEAIHDF 105
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRI 482
F N YN G+DV +MA+ L K+F K IES E+ +
Sbjct: 106 NTMFTNCYVYNKPGEDVVVMAQTLEKVFLQK---IESMPKEEIEL 147
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWEL 608
+ M+YDEK++LS ++ LP +KL +V II+ R SL + DEIE+D +++ TL EL
Sbjct: 952 KPMSYDEKRQLSLDINKLPGDKLGRVVHIIQNREPSLRDSNPDEIEIDFETLKPSTLREL 1011
Query: 609 DRFV 612
+ +V
Sbjct: 1012 ESYV 1015
>gi|242091894|ref|XP_002436437.1| hypothetical protein SORBIDRAFT_10g002570 [Sorghum bicolor]
gi|241914660|gb|EER87804.1| hypothetical protein SORBIDRAFT_10g002570 [Sorghum bicolor]
Length = 346
Score = 108 bits (271), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 138/297 (46%), Gaps = 54/297 (18%)
Query: 371 IFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN---WY 427
+ + LL+++ HK W F PVDV L + DY II PMD T++ ++ + Y
Sbjct: 79 LMRQFGVLLKEITSHKDAWPFLKPVDVVTLHIPDYHKIITQPMDFSTIQKKMERKDGTCY 138
Query: 428 KSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWV----VIESEYNREMR-- 481
+ +E DVRL F NAM YN VH+MA+ LL+ FE+KW+ +ESE R+
Sbjct: 139 TNVREICSDVRLIFANAMKYNDDQNVVHLMAKSLLEKFEEKWLHFLPKVESEEKRQKEEE 198
Query: 482 ---IGADYEMGFHTPTSRKAPPLPPPLDMRRILDRSESITHPMDSRLKPISTTPSSRTPA 538
+ A T TSR+ + ++ ++ + ++ +L+ + R
Sbjct: 199 SKGVAA-------TNTSREVA-------IAKLAKDTDDELNQINRKLEELRKMVVHRC-- 242
Query: 539 PKKPKAKDPHKRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDID 598
R MT DEK+KL + L + L+ ++I+ + N S +E+++D+D
Sbjct: 243 -----------RKMTTDEKRKLGAGICHLSPDDLNKALEIVAQDNPSFQTKAEEVDLDMD 291
Query: 599 SVDAETLWELDRFVTNYKKSLSKN------------KRKAELANQARAVAQQNVQQQ 643
+ TLW L FV +++L + KRK E+ N A + +++Q
Sbjct: 292 AQSETTLWRLKFFV---REALERQANVASGKMDENAKRKREICNALAKTASKRIKKQ 345
>gi|443691011|gb|ELT92995.1| hypothetical protein CAPTEDRAFT_169335 [Capitella teleta]
Length = 1173
Score = 108 bits (271), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 48/110 (43%), Positives = 68/110 (61%), Gaps = 3/110 (2%)
Query: 369 SKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN 425
S+ K CS ++++L KH W F PVD LGLHDY +I+ PMDLG+++ +L
Sbjct: 322 SEQMKYCSGVIKELFAKKHAGYAWPFYKPVDADLLGLHDYHEMIKRPMDLGSIRQKLETR 381
Query: 426 WYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
Y+SP EFAE+VRL F N YNP DV +MA++L +FE ++ + E
Sbjct: 382 EYESPAEFAEEVRLIFTNCYRYNPPESDVVMMAKKLQDVFEMRYARMPDE 431
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 54/88 (61%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+L+ L KH+ W F+ PVD L LHDY+ II+HPMD+GT+K RL +Y +E +D
Sbjct: 54 VLKALWKHQFSWPFHTPVDAVKLNLHDYYKIIKHPMDMGTIKKRLENQYYHRAQECIQDW 113
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIF 465
F N TYN G+D+ +M + + K F
Sbjct: 114 NQMFTNCYTYNKAGEDITVMCQAVEKQF 141
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 45/69 (65%), Gaps = 1/69 (1%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWEL 608
+ M+YDEK++LS ++ LP +KL +V II+ R SL + DEIE+D +++ TL EL
Sbjct: 586 KPMSYDEKRQLSLDINKLPGDKLGRVVHIIQSREPSLKDSNPDEIEIDFETLKPSTLREL 645
Query: 609 DRFVTNYKK 617
+ +V + K
Sbjct: 646 EAYVMSCLK 654
>gi|442615456|ref|NP_001259322.1| female sterile (1) homeotic, isoform H [Drosophila melanogaster]
gi|440216523|gb|AGB95167.1| female sterile (1) homeotic, isoform H [Drosophila melanogaster]
Length = 1105
Score = 108 bits (271), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 52/110 (47%), Positives = 65/110 (59%), Gaps = 3/110 (2%)
Query: 369 SKIFKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN 425
S KSC+ +L++L KH W F PVD + LGLHDY II+ PMDLGTVK +++
Sbjct: 473 SDALKSCNEILKELFSKKHSGYAWPFYKPVDAEMLGLHDYHDIIKKPMDLGTVKRKMDNR 532
Query: 426 WYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
YKS EFA DVRL F N YNP DV M +L +FE ++ I E
Sbjct: 533 EYKSAPEFAADVRLIFTNCYKYNPPDHDVVAMGRKLQDVFEMRYANIPDE 582
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 61/105 (58%), Gaps = 3/105 (2%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ + KH W F PVD K L L DY II+ PMD+GT+K RL N+Y S KE +D
Sbjct: 46 VMKVIWKHHFSWPFQQPVDAKKLNLPDYHKIIKQPMDMGTIKKRLENNYYWSAKETIQDF 105
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRI 482
F+N YN G+DV +MA+ L K+F K IES E+ +
Sbjct: 106 NTMFNNCYVYNKPGEDVVVMAQTLEKVFLQK---IESMPKEELEL 147
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 48/77 (62%), Gaps = 4/77 (5%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWEL 608
+ M+YDEK++LS ++ LP +KL +V II+ R SL + DEIE+D +++ TL EL
Sbjct: 945 KPMSYDEKRQLSLDINKLPGDKLGRVVHIIQNREPSLRDSNPDEIEIDFETLKPSTLREL 1004
Query: 609 DRFVTNYKKSLSKNKRK 625
+ +V + L K RK
Sbjct: 1005 ESYVAS---CLRKKTRK 1018
>gi|442615458|ref|NP_001259323.1| female sterile (1) homeotic, isoform I [Drosophila melanogaster]
gi|440216524|gb|AGB95168.1| female sterile (1) homeotic, isoform I [Drosophila melanogaster]
Length = 1115
Score = 108 bits (271), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 52/110 (47%), Positives = 65/110 (59%), Gaps = 3/110 (2%)
Query: 369 SKIFKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN 425
S KSC+ +L++L KH W F PVD + LGLHDY II+ PMDLGTVK +++
Sbjct: 483 SDALKSCNEILKELFSKKHSGYAWPFYKPVDAEMLGLHDYHDIIKKPMDLGTVKRKMDNR 542
Query: 426 WYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
YKS EFA DVRL F N YNP DV M +L +FE ++ I E
Sbjct: 543 EYKSAPEFAADVRLIFTNCYKYNPPDHDVVAMGRKLQDVFEMRYANIPDE 592
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 61/105 (58%), Gaps = 3/105 (2%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ + KH W F PVD K L L DY II+ PMD+GT+K RL N+Y S KE +D
Sbjct: 46 VMKVIWKHHFSWPFQQPVDAKKLNLPDYHKIIKQPMDMGTIKKRLENNYYWSAKETIQDF 105
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRI 482
F+N YN G+DV +MA+ L K+F K IES E+ +
Sbjct: 106 NTMFNNCYVYNKPGEDVVVMAQTLEKVFLQK---IESMPKEELEL 147
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 48/77 (62%), Gaps = 4/77 (5%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWEL 608
+ M+YDEK++LS ++ LP +KL +V II+ R SL + DEIE+D +++ TL EL
Sbjct: 955 KPMSYDEKRQLSLDINKLPGDKLGRVVHIIQNREPSLRDSNPDEIEIDFETLKPSTLREL 1014
Query: 609 DRFVTNYKKSLSKNKRK 625
+ +V + L K RK
Sbjct: 1015 ESYVAS---CLRKKTRK 1028
>gi|159507460|gb|ABW97743.1| bromodomain 4 [Xenopus laevis]
Length = 1366
Score = 108 bits (271), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 47/110 (42%), Positives = 68/110 (61%), Gaps = 3/110 (2%)
Query: 369 SKIFKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN 425
S+ + C+ ++ ++ KH W F PVDV+ LGLHDY II+HPMDLGT+K ++
Sbjct: 368 SEQLRYCAGIVREMFSKKHQAYAWPFYKPVDVETLGLHDYCEIIKHPMDLGTIKVKMENC 427
Query: 426 WYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
YK+ ++FA DVRL F N YNP +V IMA +L +FE ++ + E
Sbjct: 428 DYKNAQDFASDVRLMFSNCYKYNPPDHEVVIMARKLQDVFEMRFAKMPDE 477
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 65/120 (54%), Gaps = 10/120 (8%)
Query: 349 SKLNGKKQAGNELAHGFGTGSKIFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTI 408
++ N K+ N+L + T +L+ L KH+ W F PVDV L L DY+ I
Sbjct: 50 ARPNQPKRQTNQLQYLLKT----------VLKTLWKHQFAWPFQVPVDVVKLNLPDYYKI 99
Query: 409 IRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
I+ PMD+GT+K RL ++Y + +E +D F N YN G D+ +MAE L K+F K
Sbjct: 100 IKTPMDMGTIKKRLENHFYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 159
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 51/79 (64%), Gaps = 5/79 (6%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLF-QHDDEIEVDIDSVDAETLWEL 608
R M+Y+EK++LS ++ LP EKL +V II+ R SL + DEIE+D +++ TL EL
Sbjct: 633 RPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLREL 692
Query: 609 DRFVTNYKKSLSKNKRKAE 627
+R+VT S + KRK +
Sbjct: 693 ERYVT----SCLRKKRKPQ 707
>gi|49118460|gb|AAH73443.1| LOC443648 protein, partial [Xenopus laevis]
Length = 559
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 48/110 (43%), Positives = 68/110 (61%), Gaps = 3/110 (2%)
Query: 369 SKIFKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN 425
S+ + C++++ ++ KH W F PVDV+ LGLHDY II+HPMDLGT+K ++
Sbjct: 369 SEQLRYCASIIREMFSKKHQAYAWPFYKPVDVEALGLHDYCEIIKHPMDLGTIKVKMENR 428
Query: 426 WYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
YK +EFA DVRL F N YNP +V IMA +L +FE ++ + E
Sbjct: 429 DYKEAQEFASDVRLMFSNCYKYNPPDHEVVIMARKLQDVFEMRFAKMPDE 478
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 55/92 (59%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
A+L+ L KH+ W F PVDV L L DY II+ PMD+GT+K RL ++Y + +E +D
Sbjct: 69 AVLKTLWKHQFAWPFQLPVDVVKLNLPDYHKIIKTPMDMGTIKKRLENHYYWNAQECIQD 128
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN G D+ +MAE L K+F K
Sbjct: 129 FNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
>gi|194696466|gb|ACF82317.1| unknown [Zea mays]
gi|413942791|gb|AFW75440.1| transcription factor GTE6 [Zea mays]
Length = 346
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 135/297 (45%), Gaps = 54/297 (18%)
Query: 371 IFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNK---NWY 427
+ + LL+++ HK W F PVDV L L DY II PMD T++ ++ + Y
Sbjct: 79 LMRQFGVLLKEITSHKDAWPFLEPVDVVTLQLPDYHNIITQPMDFSTIQKKMERKDGTCY 138
Query: 428 KSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWV----VIESEYNREMR-- 481
+ +E DVRL F NAM YN +H+MA+ LL+ FE+KW+ +ESE R+
Sbjct: 139 TNVREICSDVRLIFANAMKYNDDQNVIHLMAKSLLEKFEEKWLHFLPKVESEEKRQKEEE 198
Query: 482 ---IGADYEMGFHTPTSRKAPPLPPPLDMRRILDRSESITHPMDSRLKPISTTPSSRTPA 538
+ A T TSR+ + D ++ + ++ +L+ + R
Sbjct: 199 SKGVAA-------TNTSREVAIVKLAKD-------TDDELNQINKKLEELRKMVVHRC-- 242
Query: 539 PKKPKAKDPHKRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDID 598
R MT DEK+KL + L + L ++I+ + N S +E+++D+D
Sbjct: 243 -----------RKMTTDEKRKLGAGICHLSPDDLSKALEIVAQDNPSFQTKAEEVDLDMD 291
Query: 599 SVDAETLWELDRFVTNYKKSLSKN------------KRKAELANQARAVAQQNVQQQ 643
+ TLW L FV +++L + KRK E+ N + +++Q
Sbjct: 292 AQSETTLWRLKFFV---REALERQANVASGKMDENAKRKREICNALAKTTSRRIKKQ 345
>gi|148232443|ref|NP_001086546.1| bromodomain containing 4 [Xenopus laevis]
gi|49899749|gb|AAH76786.1| Brd4-prov protein [Xenopus laevis]
Length = 1362
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 47/110 (42%), Positives = 68/110 (61%), Gaps = 3/110 (2%)
Query: 369 SKIFKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN 425
S+ + C+ ++ ++ KH W F PVDV+ LGLHDY II+HPMDLGT+K ++
Sbjct: 368 SEQLRYCAGIVREMFSKKHQAYAWPFYKPVDVETLGLHDYCEIIKHPMDLGTIKVKMENC 427
Query: 426 WYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
YK+ ++FA DVRL F N YNP +V IMA +L +FE ++ + E
Sbjct: 428 DYKNAQDFASDVRLMFSNCYKYNPPDHEVVIMARKLQDVFEMRFAKMPDE 477
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 65/120 (54%), Gaps = 10/120 (8%)
Query: 349 SKLNGKKQAGNELAHGFGTGSKIFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTI 408
++ N K+ N+L + T +L+ L KH+ W F PVDV L L DY+ I
Sbjct: 50 ARPNQPKRQTNQLQYLLKT----------VLKTLWKHQFAWPFQVPVDVVKLNLPDYYKI 99
Query: 409 IRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
I+ PMD+GT+K RL ++Y + +E +D F N YN G D+ +MAE L K+F K
Sbjct: 100 IKTPMDMGTIKKRLENHFYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 159
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 51/79 (64%), Gaps = 5/79 (6%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLF-QHDDEIEVDIDSVDAETLWEL 608
R M+Y+EK++LS ++ LP EKL +V II+ R SL + DEIE+D +++ TL EL
Sbjct: 633 RPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLREL 692
Query: 609 DRFVTNYKKSLSKNKRKAE 627
+R+VT S + KRK +
Sbjct: 693 ERYVT----SCLRKKRKPQ 707
>gi|395146565|gb|AFN53717.1| putative bromodomain-containing protein [Linum usitatissimum]
Length = 216
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 64/91 (70%)
Query: 373 KSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKE 432
+ CSALL+ L+ H +GW+F+ PVD L + DYFTII +PMDLGT+ ++L+K Y ++
Sbjct: 7 QQCSALLKVLLGHPYGWIFSKPVDPVELNIPDYFTIITNPMDLGTINSKLSKKKYFGAED 66
Query: 433 FAEDVRLTFHNAMTYNPKGQDVHIMAEQLLK 463
FA DVRLTF NAM YNP VH A +L+K
Sbjct: 67 FAADVRLTFANAMLYNPPSNSVHTTALELVK 97
>gi|349805091|gb|AEQ18018.1| hypothetical protein [Hymenochirus curtipes]
Length = 497
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 58/89 (65%)
Query: 387 HGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMT 446
+ W F PVDV+ LGLHDY II+HPMDLGT+K ++ YK P+EFA DVRL F N
Sbjct: 114 YAWPFYKPVDVEALGLHDYCEIIKHPMDLGTIKVKMENREYKEPQEFAADVRLMFSNCYK 173
Query: 447 YNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
YNP +V IMA +L +FE ++ + E
Sbjct: 174 YNPPDHEVVIMARKLQDVFEMRFAKMPDE 202
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 49/71 (69%), Gaps = 2/71 (2%)
Query: 543 KAKDPHK-RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLF-QHDDEIEVDIDSV 600
K ++P + R M+Y+EK++LS ++ LP EKL +V II+ R SSL + DEIE+D +++
Sbjct: 311 KEEEPQRCRPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSRESSLKNSNPDEIEIDFETL 370
Query: 601 DAETLWELDRF 611
TL EL+R+
Sbjct: 371 KPSTLRELERY 381
>gi|198474627|ref|XP_002132733.1| GA25991 [Drosophila pseudoobscura pseudoobscura]
gi|198138474|gb|EDY70135.1| GA25991 [Drosophila pseudoobscura pseudoobscura]
Length = 485
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/110 (47%), Positives = 66/110 (60%), Gaps = 3/110 (2%)
Query: 369 SKIFKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN 425
S+ KSC+ +L L KH W F PVD +NLGL+DY+ II+ PMDLGTVK +L+
Sbjct: 113 SEALKSCNEILMVLFSKKHSAYAWPFYEPVDAQNLGLYDYYNIIKTPMDLGTVKQKLDNR 172
Query: 426 WYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
YKS FA D+RL F N YNP D+ IM E+L FE +V + E
Sbjct: 173 VYKSASAFAADMRLIFSNCYKYNPVHHDIVIMCEKLQLAFEMLYVKVPGE 222
>gi|354487577|ref|XP_003505948.1| PREDICTED: bromodomain-containing protein 2-like [Cricetulus
griseus]
gi|344253000|gb|EGW09104.1| Bromodomain-containing protein 2 [Cricetulus griseus]
Length = 752
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 67/113 (59%), Gaps = 3/113 (2%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G S+ K C+ +L++L+ KH W F PVD LGLHDY II+HPMDL TVK ++
Sbjct: 297 GKLSEQLKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKM 356
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
Y+ +EFA DVRL F N YNP DV +MA +L +FE ++ + E
Sbjct: 357 ENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVVMARKLQDVFEFRYAKMPDE 409
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 54/98 (55%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD LGL DY II+ PMD+GT+K RL N+Y + E +D
Sbjct: 39 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDF 98
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
F N YN D+ +MA+ L KIF K + E
Sbjct: 99 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQE 136
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 49/77 (63%), Gaps = 4/77 (5%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLF-QHDDEIEVDIDSVDAETLWEL 608
R M+YDEK++LS ++ LP EKL +V II+ R SL + +EIE+D +++ TL EL
Sbjct: 591 RPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREPSLRDSNPEEIEIDFETLKPSTLREL 650
Query: 609 DRFVTNYKKSLSKNKRK 625
+R+V + L K RK
Sbjct: 651 ERYVLS---CLRKKPRK 664
>gi|347968593|ref|XP_003436250.1| AGAP002807-PB [Anopheles gambiae str. PEST]
gi|333467932|gb|EGK96763.1| AGAP002807-PB [Anopheles gambiae str. PEST]
Length = 1778
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/110 (47%), Positives = 64/110 (58%), Gaps = 3/110 (2%)
Query: 369 SKIFKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN 425
S KSC+ +L++L KH W F PVD + LGLHDY II+ PMDLGTVK +++
Sbjct: 405 SDALKSCNEILKELFSKKHSGYAWPFYKPVDAELLGLHDYHDIIKKPMDLGTVKRKMDNR 464
Query: 426 WYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
YKS EFA DVRL F N YNP DV M +L +FE + I E
Sbjct: 465 EYKSAPEFAADVRLIFTNCYKYNPPDHDVVAMGRKLQDVFEMRLANIPDE 514
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 57/95 (60%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ + KH+ W F PVD K L L DY II+ PMDLGT+K RL N+Y + KE +D
Sbjct: 44 VMKAVWKHQFSWPFQQPVDAKKLNLPDYHKIIKQPMDLGTIKKRLENNYYWTSKECIQDF 103
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVI 472
F N YN G+DV +MA+ L K+F K ++
Sbjct: 104 NTMFTNCYVYNKPGEDVVVMAQTLEKLFLTKVSLM 138
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWEL 608
+ M+YDEK++LS ++ LP +KL +V II+ R SL + DEIE+D +++ TL EL
Sbjct: 716 KPMSYDEKRQLSLDINKLPGDKLGRVVHIIQSREPSLRDSNPDEIEIDFETLKPSTLREL 775
Query: 609 DRFV 612
+ +V
Sbjct: 776 ESYV 779
>gi|426020760|sp|D4A7T3.1|BRDT_RAT RecName: Full=Bromodomain testis-specific protein
Length = 952
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 67/113 (59%), Gaps = 3/113 (2%)
Query: 372 FKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
K CS +L++++ KH W F PVDV LGLH+Y+ I+++PMDLGT+K +++K YK
Sbjct: 272 LKHCSEILKEMLAKKHLPYAWPFYNPVDVDALGLHNYYDIVKNPMDLGTIKGKMDKQEYK 331
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMR 481
EFA DVRL F N YNP +V MA L +FE + I E MR
Sbjct: 332 DACEFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFEMHFAKIPDEPVESMR 384
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 49/92 (53%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
+L+ L KH W F PVD L L DY+TII PMDL T+K RL +Y+ E D
Sbjct: 37 VVLKALWKHSFSWPFQQPVDAAKLKLPDYYTIIETPMDLSTIKKRLENRYYEKASECVGD 96
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN G D+ +MA+ L K+F K
Sbjct: 97 FNTMFSNCYLYNKPGDDIVVMAQALEKLFMQK 128
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 66/127 (51%), Gaps = 13/127 (10%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWEL 608
+ M YDEK++LS ++ LP +KL IV II+ R SL + DEIE+D +++ A TL EL
Sbjct: 503 KPMNYDEKRQLSLDINKLPGDKLGRIVHIIQSREPSLRNSNPDEIEIDFETLKASTLREL 562
Query: 609 DRFVTNYKKSLSKNKRKAELANQARAVAQQNVQQQTPAPVVTEVRKEIRTDDRIGS---- 664
+++V RK L A+ V + + + + E R+ + ++++
Sbjct: 563 EKYVLACL-------RKRSLKPHAKKVVRSKEELHSEKKLELE-RRLLDVNNQLNCRKRQ 614
Query: 665 TSSPVQV 671
T P +V
Sbjct: 615 TKRPAKV 621
>gi|410919159|ref|XP_003973052.1| PREDICTED: bromodomain-containing protein 3-like [Takifugu
rubripes]
Length = 590
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 47/110 (42%), Positives = 68/110 (61%), Gaps = 3/110 (2%)
Query: 369 SKIFKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN 425
S K CS +L++++ +H W F +PVDV LGLHDY II+ PMDL T++ ++++
Sbjct: 269 SAALKCCSGVLKEMLSKRHYACAWPFYSPVDVVALGLHDYHDIIKQPMDLSTIRKKMDQG 328
Query: 426 WYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
Y P EFA DVRL F N YNP +V MA +L ++FE ++V + E
Sbjct: 329 EYAQPAEFAADVRLMFSNCYKYNPPSHEVVHMARKLQEVFEARYVKVPQE 378
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 52/95 (54%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L +H W F PVD LGL DY+T+I +PMDL T+ RL +Y E +D+
Sbjct: 62 VIKALWRHHFSWPFQRPVDAVALGLPDYYTVITNPMDLSTIMMRLKNKYYWQALECIQDL 121
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVI 472
F N YN G + MA+ L K+ ++K ++
Sbjct: 122 NTMFSNCYVYNQPGDGIVFMAQTLEKLCQEKLTLM 156
>gi|195148234|ref|XP_002015079.1| GL19519 [Drosophila persimilis]
gi|194107032|gb|EDW29075.1| GL19519 [Drosophila persimilis]
Length = 486
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/110 (47%), Positives = 66/110 (60%), Gaps = 3/110 (2%)
Query: 369 SKIFKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN 425
S+ KSC+ +L L KH W F PVD +NLGL+DY+ II+ PMDLGTVK +L+
Sbjct: 113 SEALKSCNEILMVLFSKKHSAYAWPFYEPVDAQNLGLYDYYNIIKTPMDLGTVKQKLDNR 172
Query: 426 WYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
YKS FA D+RL F N YNP D+ IM E+L FE +V + E
Sbjct: 173 VYKSASAFAADMRLIFSNCYKYNPVHHDIVIMCEKLQLAFEMLYVKVPGE 222
>gi|392352984|ref|XP_003751370.1| PREDICTED: bromodomain testis-specific protein [Rattus norvegicus]
Length = 947
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 67/113 (59%), Gaps = 3/113 (2%)
Query: 372 FKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
K CS +L++++ KH W F PVDV LGLH+Y+ I+++PMDLGT+K +++K YK
Sbjct: 272 LKHCSEILKEMLAKKHLPYAWPFYNPVDVDALGLHNYYDIVKNPMDLGTIKGKMDKQEYK 331
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMR 481
EFA DVRL F N YNP +V MA L +FE + I E MR
Sbjct: 332 DACEFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFEMHFAKIPDEPVESMR 384
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 49/92 (53%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
+L+ L KH W F PVD L L DY+TII PMDL T+K RL +Y+ E D
Sbjct: 37 VVLKALWKHSFSWPFQQPVDAAKLKLPDYYTIIETPMDLSTIKKRLENRYYEKASECVGD 96
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN G D+ +MA+ L K+F K
Sbjct: 97 FNTMFSNCYLYNKPGDDIVVMAQALEKLFMQK 128
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWEL 608
+ M YDEK++LS ++ LP +KL IV II+ R SL + DEIE+D +++ A TL EL
Sbjct: 503 KPMNYDEKRQLSLDINKLPGDKLGRIVHIIQSREPSLRNSNPDEIEIDFETLKASTLREL 562
Query: 609 DRFVTNY--KKSLSKNKRKA 626
+++V K+SL + +K
Sbjct: 563 EKYVLACLRKRSLKPHAKKV 582
>gi|403261526|ref|XP_003923169.1| PREDICTED: bromodomain-containing protein 2 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 680
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 66/113 (58%), Gaps = 3/113 (2%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G S+ K C+ +L++L+ KH W F PVD LGLHDY II+HPMDL TVK ++
Sbjct: 224 GKLSEQLKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKM 283
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
Y+ +EFA DVRL F N YNP DV MA +L +FE ++ + E
Sbjct: 284 ENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDE 336
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 49/77 (63%), Gaps = 4/77 (5%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWEL 608
R M+YDEK++LS ++ LP EKL +V II+ R SL + +EIE+D +++ TL EL
Sbjct: 519 RPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREPSLRDSNPEEIEIDFETLKPSTLREL 578
Query: 609 DRFVTNYKKSLSKNKRK 625
+R+V + L K RK
Sbjct: 579 ERYVLS---CLRKKPRK 592
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 33/63 (52%)
Query: 413 MDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVI 472
MD+GT+K RL N+Y + E +D F N YN D+ +MA+ L KIF K +
Sbjct: 1 MDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASM 60
Query: 473 ESE 475
E
Sbjct: 61 PQE 63
>gi|189241564|ref|XP_967957.2| PREDICTED: similar to conserved hypothetical protein [Tribolium
castaneum]
Length = 1321
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 86/170 (50%), Gaps = 32/170 (18%)
Query: 338 DKFPPAESNKKSKLNGKKQAGNELA----------HGFGTGSKIF--------------- 372
D PP ES+K +K++ ++++G ++ H I+
Sbjct: 301 DYNPPLESSKSAKISTRRESGRQIKKPSMDVFVPYHQANITPPIYTSTPQMPAHKPKEKL 360
Query: 373 ----KSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN 425
KSC+ +L++L KH W F PVD + L LHDY II+ PMDLGTVK +++
Sbjct: 361 TEALKSCNEILKELFSKKHSSYAWPFYKPVDAELLMLHDYHDIIKKPMDLGTVKQKMDNR 420
Query: 426 WYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
Y+S +EFA DVRL F N YNP DV MA +L +FE K+ I E
Sbjct: 421 EYRSAQEFAADVRLIFTNCYKYNPSDHDVVAMARKLQDVFEVKFAKIPDE 470
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 56/91 (61%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+L+ + KH+ W F PVD K L L DY II+ PMDLGT+K RL+ N+Y S KE +D
Sbjct: 46 VLKAVWKHQFAWPFRQPVDAKKLNLPDYHQIIQQPMDLGTIKKRLDNNYYWSGKECIQDF 105
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN G+DV +MA+ L K+F K
Sbjct: 106 NTMFTNCYVYNKPGEDVVVMAQTLEKVFLTK 136
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 48/77 (62%), Gaps = 4/77 (5%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWEL 608
+ M+YDEK++LS ++ LP +KL +V II+ R SL + DEIE+D +++ TL EL
Sbjct: 677 KPMSYDEKRQLSLDINKLPGDKLGRVVHIIQSREPSLRDSNPDEIEIDFETLKPSTLREL 736
Query: 609 DRFVTNYKKSLSKNKRK 625
+ +V + L K RK
Sbjct: 737 ESYVAS---CLRKKPRK 750
>gi|392332962|ref|XP_003752750.1| PREDICTED: bromodomain testis-specific protein [Rattus norvegicus]
gi|149028625|gb|EDL83966.1| bromodomain, testis-specific [Rattus norvegicus]
Length = 947
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 67/113 (59%), Gaps = 3/113 (2%)
Query: 372 FKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
K CS +L++++ KH W F PVDV LGLH+Y+ I+++PMDLGT+K +++K YK
Sbjct: 272 LKHCSEILKEMLAKKHLPYAWPFYNPVDVDALGLHNYYDIVKNPMDLGTIKGKMDKQEYK 331
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMR 481
EFA DVRL F N YNP +V MA L +FE + I E MR
Sbjct: 332 DACEFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFEMHFAKIPDEPVESMR 384
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 49/92 (53%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
+L+ L KH W F PVD L L DY+TII PMDL T+K RL +Y+ E D
Sbjct: 37 VVLKALWKHSFSWPFQQPVDAAKLKLPDYYTIIETPMDLSTIKKRLENRYYEKASECVGD 96
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN G D+ +MA+ L K+F K
Sbjct: 97 FNTMFSNCYLYNKPGDDIVVMAQALEKLFMQK 128
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 68/129 (52%), Gaps = 13/129 (10%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWEL 608
+ M YDEK++LS ++ LP +KL IV II+ R SL + DEIE+D +++ A TL EL
Sbjct: 503 KPMNYDEKRQLSLDINKLPGDKLGRIVHIIQSREPSLRNSNPDEIEIDFETLKASTLREL 562
Query: 609 DRFVTNYKKSLSKNKRKAELANQARAVAQQNVQQQTPAPVVTEVRKEIRTDDRIGS---- 664
+++V RK L A+ V + + + + E R+ + ++++
Sbjct: 563 EKYVLACL-------RKRSLKPHAKKVVRSKEELHSEKKLELE-RRLLDVNNQLNCRKRQ 614
Query: 665 TSSPVQVEK 673
T P +VEK
Sbjct: 615 TKRPAKVEK 623
>gi|395832116|ref|XP_003789122.1| PREDICTED: bromodomain-containing protein 2 isoform 2 [Otolemur
garnettii]
Length = 680
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 66/113 (58%), Gaps = 3/113 (2%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G S+ K C+ +L++L+ KH W F PVD LGLHDY II+HPMDL TVK ++
Sbjct: 224 GKLSEQLKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKM 283
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
Y+ +EFA DVRL F N YNP DV MA +L +FE ++ + E
Sbjct: 284 ENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDE 336
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 49/77 (63%), Gaps = 4/77 (5%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWEL 608
R M+YDEK++LS ++ LP EKL +V II+ R SL + +EIE+D +++ TL EL
Sbjct: 519 RPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREPSLRDSNPEEIEIDFETLKPSTLREL 578
Query: 609 DRFVTNYKKSLSKNKRK 625
+R+V + L K RK
Sbjct: 579 ERYVLS---CLRKKPRK 592
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 33/63 (52%)
Query: 413 MDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVI 472
MD+GT+K RL ++Y + E +D F N YN D+ +MA+ L KIF K +
Sbjct: 1 MDMGTIKRRLENSYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASM 60
Query: 473 ESE 475
E
Sbjct: 61 PQE 63
>gi|242058181|ref|XP_002458236.1| hypothetical protein SORBIDRAFT_03g029565 [Sorghum bicolor]
gi|241930211|gb|EES03356.1| hypothetical protein SORBIDRAFT_03g029565 [Sorghum bicolor]
Length = 225
Score = 107 bits (268), Expect = 2e-20, Method: Composition-based stats.
Identities = 57/107 (53%), Positives = 74/107 (69%)
Query: 369 SKIFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
S+ F C ALL+ L++H GWVF+APVD + LGL DY+T++ PMDLGTV RL + Y
Sbjct: 57 SRAFGRCRALLDDLLRHDDGWVFDAPVDARALGLRDYYTVVADPMDLGTVLRRLERRRYV 116
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
P FA+DVRLTF NAM+YN +G V+ A +L IFE +W IE+E
Sbjct: 117 YPTAFADDVRLTFRNAMSYNDEGDPVYESAAELSGIFEARWASIEAE 163
>gi|441594234|ref|XP_004092963.1| PREDICTED: LOW QUALITY PROTEIN: bromodomain-containing protein 2
[Nomascus leucogenys]
Length = 682
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 66/113 (58%), Gaps = 3/113 (2%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G S+ K C+ +L++L+ KH W F PVD LGLHDY II+HPMDL TVK ++
Sbjct: 224 GKLSEQLKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKM 283
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
Y+ +EFA DVRL F N YNP DV MA +L +FE ++ + E
Sbjct: 284 ENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDE 336
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 49/77 (63%), Gaps = 4/77 (5%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWEL 608
R M+YDEK++LS ++ LP EKL +V II+ R SL + +EIE+D +++ TL EL
Sbjct: 521 RPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREPSLRDSNPEEIEIDFETLKPSTLREL 580
Query: 609 DRFVTNYKKSLSKNKRK 625
+R+V + L K RK
Sbjct: 581 ERYVLS---CLRKKPRK 594
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 33/63 (52%)
Query: 413 MDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVI 472
MD+GT+K RL N+Y + E +D F N YN D+ +MA+ L KIF K +
Sbjct: 1 MDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASM 60
Query: 473 ESE 475
E
Sbjct: 61 PQE 63
>gi|426352679|ref|XP_004043837.1| PREDICTED: bromodomain-containing protein 2 isoform 3 [Gorilla
gorilla gorilla]
gi|52545711|emb|CAH56208.1| hypothetical protein [Homo sapiens]
gi|119624067|gb|EAX03662.1| bromodomain containing 2, isoform CRA_a [Homo sapiens]
Length = 681
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 66/113 (58%), Gaps = 3/113 (2%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G S+ K C+ +L++L+ KH W F PVD LGLHDY II+HPMDL TVK ++
Sbjct: 224 GKLSEQLKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKM 283
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
Y+ +EFA DVRL F N YNP DV MA +L +FE ++ + E
Sbjct: 284 ENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDE 336
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 49/77 (63%), Gaps = 4/77 (5%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLF-QHDDEIEVDIDSVDAETLWEL 608
R M+YDEK++LS ++ LP EKL +V II+ R SL + +EIE+D +++ TL EL
Sbjct: 520 RPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREPSLRDSNPEEIEIDFETLKPSTLREL 579
Query: 609 DRFVTNYKKSLSKNKRK 625
+R+V + L K RK
Sbjct: 580 ERYVLS---CLRKKPRK 593
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 33/63 (52%)
Query: 413 MDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVI 472
MD+GT+K RL N+Y + E +D F N YN D+ +MA+ L KIF K +
Sbjct: 1 MDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASM 60
Query: 473 ESE 475
E
Sbjct: 61 PQE 63
>gi|410958888|ref|XP_003986045.1| PREDICTED: bromodomain-containing protein 2 isoform 3 [Felis catus]
Length = 684
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 66/113 (58%), Gaps = 3/113 (2%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G S+ K C+ +L++L+ KH W F PVD LGLHDY II+HPMDL TVK ++
Sbjct: 224 GKLSEQLKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKM 283
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
Y+ +EFA DVRL F N YNP DV MA +L +FE ++ + E
Sbjct: 284 ENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDE 336
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 49/77 (63%), Gaps = 4/77 (5%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWEL 608
R M+YDEK++LS ++ LP EKL +V II+ R SL + +EIE+D +++ TL EL
Sbjct: 522 RPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREPSLRDSNPEEIEIDFETLKPSTLREL 581
Query: 609 DRFVTNYKKSLSKNKRK 625
+R+V + L K RK
Sbjct: 582 ERYVLS---CLRKKPRK 595
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 33/63 (52%)
Query: 413 MDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVI 472
MD+GT+K RL N+Y + E +D F N YN D+ +MA+ L KIF K +
Sbjct: 1 MDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASM 60
Query: 473 ESE 475
E
Sbjct: 61 PQE 63
>gi|363747028|ref|XP_003643891.1| PREDICTED: bromodomain-containing protein 4-like [Gallus gallus]
Length = 1354
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 72/128 (56%), Gaps = 6/128 (4%)
Query: 354 KKQAGNELAHGFGTGSKI---FKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFT 407
KK + H SK+ K CS +++++ KH W F PVDV+ LGLHDY
Sbjct: 348 KKDVPDSQQHMVEKSSKVSEQLKYCSGIIKEMFAKKHAAYAWPFYKPVDVEALGLHDYCD 407
Query: 408 IIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFED 467
II+HPMDL T+K++L Y+ +EFA DVRL F N YNP +V MA +L +FE
Sbjct: 408 IIKHPMDLSTIKSKLENREYRDAQEFAADVRLMFSNCYKYNPADHEVVAMARKLQDVFEM 467
Query: 468 KWVVIESE 475
++ + E
Sbjct: 468 RFAKMPDE 475
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 54/92 (58%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
+L+ L KH+ W F PVD L L DY+ II+ PMD+GT+K RL N+Y + +E +D
Sbjct: 87 VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQD 146
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN G D+ +MAE L K+F K
Sbjct: 147 FNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 178
>gi|297661253|ref|XP_002809177.1| PREDICTED: bromodomain-containing protein 2 isoform 4 [Pongo
abelii]
Length = 681
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 66/113 (58%), Gaps = 3/113 (2%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G S+ K C+ +L++L+ KH W F PVD LGLHDY II+HPMDL TVK ++
Sbjct: 224 GKLSEQLKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKM 283
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
Y+ +EFA DVRL F N YNP DV MA +L +FE ++ + E
Sbjct: 284 ENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDE 336
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 49/77 (63%), Gaps = 4/77 (5%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWEL 608
R M+YDEK++LS ++ LP EKL +V II+ R SL + +EIE+D +++ TL EL
Sbjct: 520 RPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREPSLRDSNPEEIEIDFETLKPSTLREL 579
Query: 609 DRFVTNYKKSLSKNKRK 625
+R+V + L K RK
Sbjct: 580 ERYVLS---CLRKKPRK 593
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 33/63 (52%)
Query: 413 MDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVI 472
MD+GT+K RL N+Y + E +D F N YN D+ +MA+ L KIF K +
Sbjct: 1 MDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASM 60
Query: 473 ESE 475
E
Sbjct: 61 PQE 63
>gi|332823728|ref|XP_001167922.2| PREDICTED: bromodomain-containing protein 2 isoform 7 [Pan
troglodytes]
Length = 680
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 66/113 (58%), Gaps = 3/113 (2%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G S+ K C+ +L++L+ KH W F PVD LGLHDY II+HPMDL TVK ++
Sbjct: 224 GKLSEQLKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKM 283
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
Y+ +EFA DVRL F N YNP DV MA +L +FE ++ + E
Sbjct: 284 ENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDE 336
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 49/77 (63%), Gaps = 4/77 (5%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWEL 608
R M+YDEK++LS ++ LP EKL +V II+ R SL + +EIE+D +++ TL EL
Sbjct: 519 RPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREPSLRDSNPEEIEIDFETLKPSTLREL 578
Query: 609 DRFVTNYKKSLSKNKRK 625
+R+V + L K RK
Sbjct: 579 ERYVLS---CLRKKPRK 592
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 33/63 (52%)
Query: 413 MDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVI 472
MD+GT+K RL N+Y + E +D F N YN D+ +MA+ L KIF K +
Sbjct: 1 MDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASM 60
Query: 473 ESE 475
E
Sbjct: 61 PQE 63
>gi|195565677|ref|XP_002106425.1| GD16134 [Drosophila simulans]
gi|194203801|gb|EDX17377.1| GD16134 [Drosophila simulans]
Length = 1038
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/110 (47%), Positives = 65/110 (59%), Gaps = 3/110 (2%)
Query: 369 SKIFKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN 425
S KSC+ +L++L KH W F PVD + LGLHDY II+ PMDLGTVK +++
Sbjct: 454 SDALKSCNEILKELFSKKHSGYAWPFYKPVDAEMLGLHDYHDIIKKPMDLGTVKRKMDNR 513
Query: 426 WYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
YKS EFA DVRL F N YNP DV M +L +FE ++ I E
Sbjct: 514 EYKSAPEFAADVRLIFTNCYKYNPPDHDVVAMGRKLQDVFEMRYANIPDE 563
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 61/105 (58%), Gaps = 3/105 (2%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ + KH W F PVD K L L DY II+ PMD+GT+K RL N+Y S KE +D
Sbjct: 46 VMKVIWKHHFSWPFQQPVDAKKLNLPDYHKIIKQPMDMGTIKKRLENNYYWSAKETIQDF 105
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRI 482
F+N YN G+DV +MA+ L K+F K IES E+ +
Sbjct: 106 NTMFNNCYVYNKPGEDVVVMAQTLEKVFLQK---IESMPKEELEL 147
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 48/77 (62%), Gaps = 4/77 (5%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWEL 608
+ M+YDEK++LS ++ LP +KL +V II+ R SL + DEIE+D +++ TL EL
Sbjct: 925 KPMSYDEKRQLSLDINKLPGDKLGRVVHIIQNREPSLRDSNPDEIEIDFETLKPSTLREL 984
Query: 609 DRFVTNYKKSLSKNKRK 625
+ +V + L K RK
Sbjct: 985 ESYVAS---CLRKKTRK 998
>gi|194223682|ref|XP_001914731.1| PREDICTED: bromodomain-containing protein 4 [Equus caballus]
Length = 1364
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 74/135 (54%), Gaps = 5/135 (3%)
Query: 369 SKIFKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN 425
S+ K CS +L+++ KH W F PVDV+ LGLHDY II+HPMD+ T+K++L
Sbjct: 351 SEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAR 410
Query: 426 WYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGAD 485
Y+ +EF DVRL F N YNP +V MA +L +FE ++ + E E + A
Sbjct: 411 EYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE--PEEPVVAV 468
Query: 486 YEMGFHTPTSRKAPP 500
PT APP
Sbjct: 469 SSPAVPPPTKVAAPP 483
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 60/107 (56%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+L+ L KH+ W F PVD L L DY+ II+ PMD+GT+K RL N+Y + +E +D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGA 484
F N YN G D+ +MAE L K+F K + +E M + A
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEETEIMIVQA 176
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 51/79 (64%), Gaps = 5/79 (6%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLF-QHDDEIEVDIDSVDAETLWEL 608
+ M+Y+EK++LS ++ LP EKL +V II+ R SL + DEIE+D +++ TL EL
Sbjct: 608 KPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLREL 667
Query: 609 DRFVTNYKKSLSKNKRKAE 627
+R+VT S + KRK +
Sbjct: 668 ERYVT----SCLRKKRKPQ 682
>gi|18308125|gb|AAL67833.1|AF461395_1 bromodomain-containing protein BRD4 long variant [Mus musculus]
Length = 1400
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/140 (38%), Positives = 76/140 (54%), Gaps = 12/140 (8%)
Query: 342 PAESNKKSKLNGKKQAGNELAHGFGTGSKI---FKSCSALLEKLMKHKHG---WVFNAPV 395
P + KK + ++ G E SKI K CS +L+++ KH W F PV
Sbjct: 328 PVKPPKKDVPDSQQHPGPE------KSSKISEQLKCCSGILKEMFAKKHAAYAWPFYKPV 381
Query: 396 DVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVH 455
DV+ LGLHDY II+HPMD+ T+K++L Y+ +EF DVRL F N YNP +V
Sbjct: 382 DVEALGLHDYCDIIKHPMDMSTIKSKLESREYRDAQEFGADVRLMFSNCYKYNPPDHEVV 441
Query: 456 IMAEQLLKIFEDKWVVIESE 475
MA +L +FE ++ + E
Sbjct: 442 AMARKLQDVFEMRFAKMPDE 461
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 60/107 (56%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+L+ L KH+ W F PVD L L DY+ II+ PMD+GT+K RL N+Y + +E +D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGA 484
F N YN G D+ +MAE L K+F K + +E M + A
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEETEIMIVQA 176
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 51/79 (64%), Gaps = 5/79 (6%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLF-QHDDEIEVDIDSVDAETLWEL 608
+ M+Y+EK++LS ++ LP EKL +V II+ R SL + DEIE+D +++ TL EL
Sbjct: 609 KPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLREL 668
Query: 609 DRFVTNYKKSLSKNKRKAE 627
+R+VT S + KRK +
Sbjct: 669 ERYVT----SCLRKKRKPQ 683
>gi|27804346|gb|AAO22237.1| BRD4-NUT fusion oncoprotein [Homo sapiens]
Length = 1846
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 74/135 (54%), Gaps = 5/135 (3%)
Query: 369 SKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN 425
S+ K CS +L+++ KH W F PVDV+ LGLHDY II+HPMD+ T+K++L
Sbjct: 351 SEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAR 410
Query: 426 WYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGAD 485
Y+ +EF DVRL F N YNP +V MA +L +FE ++ + E E + A
Sbjct: 411 EYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE--PEEPVVAV 468
Query: 486 YEMGFHTPTSRKAPP 500
PT APP
Sbjct: 469 SSPAVPPPTKVVAPP 483
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 60/107 (56%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+L+ L KH+ W F PVD L L DY+ II+ PMD+GT+K RL N+Y + +E +D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGA 484
F N YN G D+ +MAE L K+F K + +E M + A
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEETEIMIVQA 176
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 51/79 (64%), Gaps = 5/79 (6%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLF-QHDDEIEVDIDSVDAETLWEL 608
+ M+Y+EK++LS ++ LP EKL +V II+ R SL + DEIE+D +++ TL EL
Sbjct: 608 KPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLREL 667
Query: 609 DRFVTNYKKSLSKNKRKAE 627
+R+VT S + KRK +
Sbjct: 668 ERYVT----SCLRKKRKPQ 682
>gi|395822025|ref|XP_003784325.1| PREDICTED: bromodomain testis-specific protein [Otolemur garnettii]
Length = 928
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/153 (37%), Positives = 82/153 (53%), Gaps = 12/153 (7%)
Query: 339 KFPPAESN-KKSKLNGKKQAGNELAHGFGTGSKI---FKSCSALLEKLMKHKH---GWVF 391
+ PP + N +K+ L +Q N G K+ + CS +L++++ KH W F
Sbjct: 244 RMPPIKENVQKNVLPDSQQQYN-----VGKSVKVTEQLRHCSEILKEMLAKKHFSYAWPF 298
Query: 392 NAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKG 451
PVDV LGLH+Y+ I++HPMDLGT+K +++ YK EFA DVRL F N YNP
Sbjct: 299 YNPVDVNALGLHNYYDIVKHPMDLGTIKGKMDNQEYKDAYEFAADVRLMFMNCYKYNPPD 358
Query: 452 QDVHIMAEQLLKIFEDKWVVIESEYNREMRIGA 484
+V MA+ L +FE + I E M +
Sbjct: 359 HEVVTMAKMLQDVFEMHFAKIPDEPVESMSVCC 391
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 52/92 (56%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
+L+ L KH W F PVD L L DY+TII++PMDL T+K RL +Y E ED
Sbjct: 37 VVLKALWKHSFSWPFQHPVDAVKLKLPDYYTIIKNPMDLNTIKKRLENKYYVKASECIED 96
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
+ F N YN G D+ +MA+ L K+F K
Sbjct: 97 LNTMFSNCYLYNKPGDDIVLMAQALEKLFIQK 128
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWEL 608
+ M YDEK++LS ++ LP +KL +V+II+ R SL + DEIE+D +++ A TL EL
Sbjct: 511 KPMNYDEKRQLSLDINKLPGDKLGRVVRIIQSREPSLRNSNPDEIEIDFETLKASTLREL 570
Query: 609 DRFV 612
+++V
Sbjct: 571 EKYV 574
>gi|312373441|gb|EFR21184.1| hypothetical protein AND_17422 [Anopheles darlingi]
Length = 1442
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/110 (47%), Positives = 64/110 (58%), Gaps = 3/110 (2%)
Query: 369 SKIFKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN 425
S KSC+ +L++L KH W F PVD + LGLHDY II+ PMDLGTVK +++
Sbjct: 23 SDALKSCNEILKELFSKKHSGYAWPFYKPVDAELLGLHDYHDIIKKPMDLGTVKRKMDNR 82
Query: 426 WYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
YKS EFA DVRL F N YNP DV M +L +FE + I E
Sbjct: 83 EYKSAPEFAADVRLIFTNCYKYNPPDHDVVAMGRKLQDVFEMRLANIPDE 132
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 47/75 (62%), Gaps = 4/75 (5%)
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWELDR 610
M+YDEK++LS ++ LP +KL +V II+ R SL + DEIE+D +++ TL EL+
Sbjct: 342 MSYDEKRQLSLDINKLPGDKLGRVVHIIQSREPSLRDSNPDEIEIDFETLKPSTLRELES 401
Query: 611 FVTNYKKSLSKNKRK 625
+V + L K RK
Sbjct: 402 YVAS---CLRKKTRK 413
>gi|291413178|ref|XP_002722853.1| PREDICTED: bromodomain-containing protein 4 [Oryctolagus cuniculus]
Length = 1346
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 74/135 (54%), Gaps = 5/135 (3%)
Query: 369 SKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN 425
S+ K CS +L+++ KH W F PVDV+ LGLHDY II+HPMD+ T+K++L
Sbjct: 351 SEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAR 410
Query: 426 WYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGAD 485
Y+ +EF DVRL F N YNP +V MA +L +FE ++ + E E + A
Sbjct: 411 EYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE--PEEPVVAV 468
Query: 486 YEMGFHTPTSRKAPP 500
PT APP
Sbjct: 469 SSPAVPPPTKVAAPP 483
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 60/107 (56%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+L+ L KH+ W F PVD L L DY+ II+ PMD+GT+K RL N+Y + +E +D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGA 484
F N YN G D+ +MAE L K+F K + +E M + A
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEETEIMIVQA 176
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 51/79 (64%), Gaps = 5/79 (6%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLF-QHDDEIEVDIDSVDAETLWEL 608
+ M+Y+EK++LS ++ LP EKL +V II+ R SL + DEIE+D +++ TL EL
Sbjct: 608 KPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLREL 667
Query: 609 DRFVTNYKKSLSKNKRKAE 627
+R+VT S + KRK +
Sbjct: 668 ERYVT----SCLRKKRKPQ 682
>gi|74184776|dbj|BAE27987.1| unnamed protein product [Mus musculus]
Length = 1401
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/140 (38%), Positives = 76/140 (54%), Gaps = 12/140 (8%)
Query: 342 PAESNKKSKLNGKKQAGNELAHGFGTGSKI---FKSCSALLEKLMKHKHG---WVFNAPV 395
P + KK + ++ G E SKI K CS +L+++ KH W F PV
Sbjct: 329 PVKPPKKDVPDSQQHPGPE------KSSKISEQLKCCSGILKEMFAKKHAAYAWPFYKPV 382
Query: 396 DVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVH 455
DV+ LGLHDY II+HPMD+ T+K++L Y+ +EF DVRL F N YNP +V
Sbjct: 383 DVEALGLHDYCDIIKHPMDMSTIKSKLESREYRDAQEFGADVRLMFSNCYKYNPPDHEVV 442
Query: 456 IMAEQLLKIFEDKWVVIESE 475
MA +L +FE ++ + E
Sbjct: 443 AMARKLQDVFEMRFAKMPDE 462
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 60/107 (56%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+L+ L KH+ W F PVD L L DY+ II+ PMD+GT+K RL N+Y + +E +D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGA 484
F N YN G D+ +MAE L K+F K + +E M + A
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEETEIMIVQA 176
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 51/79 (64%), Gaps = 5/79 (6%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLF-QHDDEIEVDIDSVDAETLWEL 608
+ M+Y+EK++LS ++ LP EKL +V II+ R SL + DEIE+D +++ TL EL
Sbjct: 610 KPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLREL 669
Query: 609 DRFVTNYKKSLSKNKRKAE 627
+R+VT S + KRK +
Sbjct: 670 ERYVT----SCLRKKRKPQ 684
>gi|198282051|ref|NP_001128282.1| bromodomain containing 2 [Xenopus (Silurana) tropicalis]
gi|197245764|gb|AAI68574.1| brd2 protein [Xenopus (Silurana) tropicalis]
Length = 758
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/113 (43%), Positives = 68/113 (60%), Gaps = 3/113 (2%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G S+ K C+ +L++L+ KH W F PVDV LGLHDY+ II+HPMDL T+K ++
Sbjct: 318 GKLSEQLKYCNGILKELLSKKHAAYAWPFYKPVDVSALGLHDYYDIIKHPMDLSTIKKKM 377
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
+ +K +EFA VRL F N YNP DV MA +L +FE ++ + E
Sbjct: 378 DNREFKDAQEFAAAVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDE 430
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 52/92 (56%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
+++ L KH+ W F PVD LGL DY II+ PMD+GT+K RL N+Y S E +D
Sbjct: 65 VVMKSLWKHQFSWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKKRLENNYYWSALECMQD 124
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN D+ +MA+ L K+F K
Sbjct: 125 FNTMFTNCYIYNKPTDDIVLMAQSLEKMFLQK 156
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 49/77 (63%), Gaps = 4/77 (5%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWEL 608
+ MTYDEK++LS ++ LP EKL +V II+ R SL + +EIE+D +++ TL EL
Sbjct: 589 KPMTYDEKRQLSLDINKLPGEKLGRVVHIIQSREPSLRDSNPEEIEIDFETLKPSTLREL 648
Query: 609 DRFVTNYKKSLSKNKRK 625
+R+V + L K RK
Sbjct: 649 ERYVMS---CLRKKPRK 662
>gi|432109400|gb|ELK33657.1| Bromodomain-containing protein 4 [Myotis davidii]
Length = 1183
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 48/115 (41%), Positives = 67/115 (58%), Gaps = 3/115 (2%)
Query: 369 SKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN 425
S+ K CS +L+++ KH W F PVDV+ LGLHDY II+HPMD+ T+K++L
Sbjct: 348 SEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAR 407
Query: 426 WYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREM 480
Y+ +EF DVRL F N YNP +V MA +L +FE ++ + E M
Sbjct: 408 EYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDEPEEPM 462
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 60/107 (56%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+L+ L KH+ W F PVD L L DY+ II+ PMD+GT+K RL N+Y + +E +D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGA 484
F N YN G D+ +MAE L K+F K + +E M + A
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEETEIMIVPA 176
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 51/79 (64%), Gaps = 5/79 (6%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLF-QHDDEIEVDIDSVDAETLWEL 608
+ M+Y+EK++LS ++ LP EKL +V II+ R SL + DEIE+D +++ TL EL
Sbjct: 605 KPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLREL 664
Query: 609 DRFVTNYKKSLSKNKRKAE 627
+R+VT S + KRK +
Sbjct: 665 ERYVT----SCLRKKRKPQ 679
>gi|50400639|sp|Q9ESU6.1|BRD4_MOUSE RecName: Full=Bromodomain-containing protein 4; AltName:
Full=Mitotic chromosome-associated protein; Short=MCAP
gi|9931486|gb|AAG02191.1|AF273217_1 cell proliferation related protein CAP [Mus musculus]
Length = 1400
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/140 (38%), Positives = 76/140 (54%), Gaps = 12/140 (8%)
Query: 342 PAESNKKSKLNGKKQAGNELAHGFGTGSKI---FKSCSALLEKLMKHKHG---WVFNAPV 395
P + KK + ++ G E SKI K CS +L+++ KH W F PV
Sbjct: 328 PVKPPKKDVPDSQQHPGPE------KSSKISEQLKCCSGILKEMFAKKHAAYAWPFYKPV 381
Query: 396 DVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVH 455
DV+ LGLHDY II+HPMD+ T+K++L Y+ +EF DVRL F N YNP +V
Sbjct: 382 DVEALGLHDYCDIIKHPMDMSTIKSKLESREYRDAQEFGADVRLMFSNCYKYNPPDHEVV 441
Query: 456 IMAEQLLKIFEDKWVVIESE 475
MA +L +FE ++ + E
Sbjct: 442 AMARKLQDVFEMRFAKMPDE 461
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 60/107 (56%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+L+ L KH+ W F PVD L L DY+ II+ PMD+GT+K RL N+Y + +E +D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGA 484
F N YN G D+ +MAE L K+F K + +E M + A
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEETEIMIVQA 176
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 51/79 (64%), Gaps = 5/79 (6%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLF-QHDDEIEVDIDSVDAETLWEL 608
+ M+Y+EK++LS ++ LP EKL +V II+ R SL + DEIE+D +++ TL EL
Sbjct: 609 KPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLREL 668
Query: 609 DRFVTNYKKSLSKNKRKAE 627
+R+VT S + KRK +
Sbjct: 669 ERYVT----SCLRKKRKPQ 683
>gi|226342873|ref|NP_065254.3| bromodomain-containing protein 4 isoform 1 [Mus musculus]
gi|148708379|gb|EDL40326.1| bromodomain containing 4, isoform CRA_a [Mus musculus]
gi|148708382|gb|EDL40329.1| bromodomain containing 4, isoform CRA_a [Mus musculus]
Length = 1400
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/140 (38%), Positives = 76/140 (54%), Gaps = 12/140 (8%)
Query: 342 PAESNKKSKLNGKKQAGNELAHGFGTGSKI---FKSCSALLEKLMKHKHG---WVFNAPV 395
P + KK + ++ G E SKI K CS +L+++ KH W F PV
Sbjct: 328 PVKPPKKDVPDSQQHPGPE------KSSKISEQLKCCSGILKEMFAKKHAAYAWPFYKPV 381
Query: 396 DVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVH 455
DV+ LGLHDY II+HPMD+ T+K++L Y+ +EF DVRL F N YNP +V
Sbjct: 382 DVEALGLHDYCDIIKHPMDMSTIKSKLESREYRDAQEFGADVRLMFSNCYKYNPPDHEVV 441
Query: 456 IMAEQLLKIFEDKWVVIESE 475
MA +L +FE ++ + E
Sbjct: 442 AMARKLQDVFEMRFAKMPDE 461
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 60/107 (56%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+L+ L KH+ W F PVD L L DY+ II+ PMD+GT+K RL N+Y + +E +D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGA 484
F N YN G D+ +MAE L K+F K + +E M + A
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEETEIMIVQA 176
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 51/79 (64%), Gaps = 5/79 (6%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLF-QHDDEIEVDIDSVDAETLWEL 608
+ M+Y+EK++LS ++ LP EKL +V II+ R SL + DEIE+D +++ TL EL
Sbjct: 609 KPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLREL 668
Query: 609 DRFVTNYKKSLSKNKRKAE 627
+R+VT S + KRK +
Sbjct: 669 ERYVT----SCLRKKRKPQ 683
>gi|348552081|ref|XP_003461857.1| PREDICTED: bromodomain-containing protein 4-like [Cavia porcellus]
Length = 1373
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/110 (42%), Positives = 66/110 (60%), Gaps = 3/110 (2%)
Query: 369 SKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN 425
S+ K CS +L+++ KH W F PVDV+ LGLHDY II+HPMD+ T+K++L
Sbjct: 351 SEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLESR 410
Query: 426 WYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
Y+ +EF DVRL F N YNP +V MA +L +FE ++ + E
Sbjct: 411 EYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE 460
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 60/107 (56%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+L+ L KH+ W F PVD L L DY+ II+ PMD+GT+K RL N+Y + +E +D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGA 484
F N YN G D+ +MAE L K+F K + +E M + A
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEETEIMIVQA 176
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 51/79 (64%), Gaps = 5/79 (6%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLF-QHDDEIEVDIDSVDAETLWEL 608
+ M+Y+EK++LS ++ LP EKL +V II+ R SL + DEIE+D +++ TL EL
Sbjct: 607 KPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLREL 666
Query: 609 DRFVTNYKKSLSKNKRKAE 627
+R+VT S + KRK +
Sbjct: 667 ERYVT----SCLRKKRKPQ 681
>gi|195655085|gb|ACG47010.1| transcription factor GTE6 [Zea mays]
Length = 346
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 135/297 (45%), Gaps = 54/297 (18%)
Query: 371 IFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNK---NWY 427
+ + LL+++ HK W F PVDV L L DY II PMD T++ ++ + Y
Sbjct: 79 LMRQFGVLLKEITSHKDAWPFLEPVDVVTLQLPDYHNIITQPMDFSTIQKKMERKDGTCY 138
Query: 428 KSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWV----VIESEYNREMR-- 481
+ +E DVRL F NAM YN +H+MA+ LL+ FE+KW+ +ESE R+
Sbjct: 139 TNVREICSDVRLIFANAMKYNDDQNVIHLMAKSLLEKFEEKWLHFLPKVESEEKRQKEEE 198
Query: 482 ---IGADYEMGFHTPTSRKAPPLPPPLDMRRILDRSESITHPMDSRLKPISTTPSSRTPA 538
+ A T TSR+ + D ++ + ++ +L+ + R
Sbjct: 199 SKGVAA-------TNTSREVAIVKLAKD-------TDDELNQINRKLEELRKMVVHRC-- 242
Query: 539 PKKPKAKDPHKRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDID 598
R MT DEK+KL + L + L ++I+ + N S +E+++D+D
Sbjct: 243 -----------RKMTTDEKRKLGAVICHLSPDDLSKALEIVAQDNPSFQTKAEEVDLDMD 291
Query: 599 SVDAETLWELDRFVTNYKKSLSKN------------KRKAELANQARAVAQQNVQQQ 643
+ TLW L FV +++L + KRK E+ N + +++Q
Sbjct: 292 AQSETTLWRLKFFV---REALERQANVASGKMDENAKRKREICNALAKTTSRRIKKQ 345
>gi|84579095|dbj|BAE72981.1| hypothetical protein [Macaca fascicularis]
Length = 617
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 74/135 (54%), Gaps = 5/135 (3%)
Query: 369 SKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN 425
S+ K CS +L+++ KH W F PVDV+ LGLHDY II+HPMD+ T+K++L
Sbjct: 247 SEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAR 306
Query: 426 WYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGAD 485
Y+ +EF DVRL F N YNP +V MA +L +FE ++ + E E + A
Sbjct: 307 EYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE--PEEPVVAV 364
Query: 486 YEMGFHTPTSRKAPP 500
PT APP
Sbjct: 365 SSPAVPPPTKVVAPP 379
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 39/72 (54%)
Query: 413 MDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVI 472
MD+GT+K RL N+Y + +E +D F N YN G D+ +MAE L K+F K +
Sbjct: 1 MDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINEL 60
Query: 473 ESEYNREMRIGA 484
+E M + A
Sbjct: 61 PTEETEIMIVQA 72
>gi|195060207|ref|XP_001995768.1| GH17935 [Drosophila grimshawi]
gi|193896554|gb|EDV95420.1| GH17935 [Drosophila grimshawi]
Length = 1220
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/107 (46%), Positives = 64/107 (59%), Gaps = 3/107 (2%)
Query: 372 FKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
KSC+ +L++L KH W F PVD + LGLHDY II+ PMDLGTVK +++ +K
Sbjct: 515 LKSCNEILKELFSKKHSGCAWPFYKPVDAELLGLHDYHDIIKKPMDLGTVKRKMDNREFK 574
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
S EFA DVRL F N YNP DV M +L +FE ++ I E
Sbjct: 575 SAPEFAADVRLIFTNCYKYNPPDHDVVAMGRKLQDVFEMRYANIPDE 621
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 53/91 (58%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH W F PVD K L L DY II+ PMDLGT+K RL N+Y S KE D+
Sbjct: 46 VMKFLWKHHFSWPFQQPVDAKKLNLPDYHKIIKQPMDLGTIKKRLENNYYWSAKEAVNDI 105
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN G+DV +MA L K++ K
Sbjct: 106 NTMFTNCSVYNKPGEDVVVMAHALEKVYLQK 136
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWEL 608
+ M+YDEK++LS ++ LP +KL +V II+ R SL + DEIE+D +++ TL EL
Sbjct: 989 KPMSYDEKRQLSLDINKLPGDKLGRVVHIIQNREPSLRDSNPDEIEIDFETLKPSTLREL 1048
Query: 609 DRFV 612
+ +V
Sbjct: 1049 ESYV 1052
>gi|197306298|gb|ACH59500.1| DNA-binding bromodomain-containing protein [Pseudotsuga menziesii]
gi|197306300|gb|ACH59501.1| DNA-binding bromodomain-containing protein [Pseudotsuga menziesii]
gi|197306304|gb|ACH59503.1| DNA-binding bromodomain-containing protein [Pseudotsuga menziesii]
gi|197306306|gb|ACH59504.1| DNA-binding bromodomain-containing protein [Pseudotsuga menziesii]
gi|197306308|gb|ACH59505.1| DNA-binding bromodomain-containing protein [Pseudotsuga menziesii]
gi|197306310|gb|ACH59506.1| DNA-binding bromodomain-containing protein [Pseudotsuga menziesii]
gi|197306312|gb|ACH59507.1| DNA-binding bromodomain-containing protein [Pseudotsuga menziesii]
gi|197306314|gb|ACH59508.1| DNA-binding bromodomain-containing protein [Pseudotsuga menziesii]
gi|197306326|gb|ACH59514.1| DNA-binding bromodomain-containing protein [Pseudotsuga menziesii]
gi|197306328|gb|ACH59515.1| DNA-binding bromodomain-containing protein [Pseudotsuga menziesii]
gi|197306330|gb|ACH59516.1| DNA-binding bromodomain-containing protein [Pseudotsuga menziesii]
gi|197306338|gb|ACH59520.1| DNA-binding bromodomain-containing protein [Pseudotsuga menziesii]
gi|197306340|gb|ACH59521.1| DNA-binding bromodomain-containing protein [Pseudotsuga menziesii]
gi|197306342|gb|ACH59522.1| DNA-binding bromodomain-containing protein [Pseudotsuga menziesii]
gi|197306344|gb|ACH59523.1| DNA-binding bromodomain-containing protein [Pseudotsuga macrocarpa]
Length = 139
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/156 (44%), Positives = 89/156 (57%), Gaps = 42/156 (26%)
Query: 436 DVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMR-----------IGA 484
DVRLTF+NAMTYNP G +VH MAEQ+L+ FED+W I +Y E R GA
Sbjct: 3 DVRLTFNNAMTYNPIGHEVHTMAEQMLQFFEDRWKPICDKYEEEKRKLSWSGDDGLLPGA 62
Query: 485 DY---EMGFHTPTS---RKAPPL------PPPLDMRRILDRSESITHPMDSRLKPISTTP 532
++ F PT +K PL PPP ++S +P+ L+P +
Sbjct: 63 SQNIKKLPFCEPTKKNLKKTEPLLGLSPRPPP--------NAKSKANPV---LRPFA--- 108
Query: 533 SSRTPAPKKPKAKDPHKRDMTYDEKQKLSTNLQSLP 568
APKKPKAKDPHKR+MT++EKQKLS +LQSLP
Sbjct: 109 -----APKKPKAKDPHKREMTFEEKQKLSGSLQSLP 139
>gi|47208417|emb|CAF92198.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1579
Score = 107 bits (267), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 63/104 (60%), Gaps = 3/104 (2%)
Query: 375 CSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPK 431
C++L+ +++ KH W F PVD LGLHDY II+HPMDL T+K +L Y+ P+
Sbjct: 443 CASLVREMLSKKHAAYAWPFYKPVDADALGLHDYHDIIKHPMDLSTIKVKLENRQYREPQ 502
Query: 432 EFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
EFA DVRL F N YNP +V MA +L +FE ++ + E
Sbjct: 503 EFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE 546
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 59/130 (45%), Gaps = 32/130 (24%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNL--------------------------------GLHDY 405
+L+ L KH+ W F+APVD L L DY
Sbjct: 51 VLKTLWKHQFAWPFHAPVDAVKLNLPVSVAPRDCSHLDIQYKYYTQFCEVNCQMQSLQDY 110
Query: 406 FTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIF 465
+TII+ PMD+GT+K RL ++Y + +E +D F N YN G D+ +MAE L K+F
Sbjct: 111 YTIIKTPMDMGTIKKRLENSYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKVF 170
Query: 466 EDKWVVIESE 475
K + E
Sbjct: 171 LQKVTEMPQE 180
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 59/92 (64%), Gaps = 5/92 (5%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLF-QHDDEIEVDIDSVDAETLWEL 608
+ MTY+EK++LS ++ LP +KL +V II+ R SL + DEIE+D +++ TL EL
Sbjct: 712 KPMTYEEKRQLSLDINKLPGDKLGRVVHIIQTREPSLKNSNPDEIEIDFETLKPSTLREL 771
Query: 609 DRFVTNYKKSLSKNKR-KAELANQARAVAQQN 639
+R+V++ L K K+ AE ++ A +++N
Sbjct: 772 ERYVSS---CLCKKKKVPAEKPVESMATSRKN 800
>gi|384247311|gb|EIE20798.1| hypothetical protein COCSUDRAFT_43706 [Coccomyxa subellipsoidea
C-169]
Length = 534
Score = 107 bits (267), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 63/104 (60%), Gaps = 4/104 (3%)
Query: 371 IFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSP 430
+ K C ++L+ ++ HK W F PVD+ DY +++ PMDL VK ++ Y +P
Sbjct: 89 VSKQCMSVLKSILAHKWAWPFADPVDLARYA--DYLNVVKSPMDLKWVKRKVEGGQYATP 146
Query: 431 KEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKW--VVI 472
EFA D RL F NA TYNP G DV++MA LL FEDKW VV+
Sbjct: 147 AEFAADFRLVFANAHTYNPPGTDVYVMASTLLARFEDKWNSVVV 190
>gi|33417197|gb|AAH55508.1| Brd2b protein [Danio rerio]
gi|159155579|gb|AAI54432.1| Brd2b protein [Danio rerio]
Length = 558
Score = 107 bits (267), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/135 (40%), Positives = 77/135 (57%), Gaps = 9/135 (6%)
Query: 366 GTGSKIFKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G SK + CS +L++L+ KH W F PVD LGLHDY II+HPMDL T+K ++
Sbjct: 334 GKLSKQLRYCSGVLKELLSKKHVAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTIKRKM 393
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNRE--- 479
++ Y+ ++F+ DVRL F N YNP DV MA +L +FE ++ + E + E
Sbjct: 394 DEREYREAQQFSADVRLMFSNCYKYNPPDHDVVSMARKLQDVFEFRFAKMPDEVSDEEDL 453
Query: 480 --MRIGADYEM-GFH 491
M IG + M G H
Sbjct: 454 SPMPIGRNMGMLGMH 468
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 51/92 (55%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
L++ L +H W F+ PVD L L DY II+ PMD+GT+K RL N+Y+ E +D
Sbjct: 59 VLVKALWRHHFAWPFHEPVDATRLNLPDYHKIIKQPMDMGTIKKRLENNYYRGASECLQD 118
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN D+ +MA+ L K+F K
Sbjct: 119 FNTMFTNCYIYNKPTDDIVLMAQSLEKVFLQK 150
>gi|383417065|gb|AFH31746.1| bromodomain-containing protein 4 isoform short [Macaca mulatta]
gi|387541550|gb|AFJ71402.1| bromodomain-containing protein 4 isoform short [Macaca mulatta]
Length = 721
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 74/135 (54%), Gaps = 5/135 (3%)
Query: 369 SKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN 425
S+ K CS +L+++ KH W F PVDV+ LGLHDY II+HPMD+ T+K++L
Sbjct: 351 SEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAR 410
Query: 426 WYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGAD 485
Y+ +EF DVRL F N YNP +V MA +L +FE ++ + E E + A
Sbjct: 411 EYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE--PEEPVVAV 468
Query: 486 YEMGFHTPTSRKAPP 500
PT APP
Sbjct: 469 SSPAVPPPTKVVAPP 483
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 60/107 (56%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+L+ L KH+ W F PVD L L DY+ II+ PMD+GT+K RL N+Y + +E +D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGA 484
F N YN G D+ +MAE L K+F K + +E M + A
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEETEIMIVQA 176
>gi|219118718|ref|XP_002180126.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217408383|gb|EEC48317.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 1056
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 49/93 (52%), Positives = 62/93 (66%)
Query: 369 SKIFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
+K+ C +L+ LM H+HGWVFN PVD LGL DYF II+ PMDLGT++ RL + Y
Sbjct: 173 AKLKSKCLDVLKGLMAHQHGWVFNGPVDPVELGLVDYFEIIKKPMDLGTIQKRLESSAYH 232
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQL 461
S +F D+ LTF NAM YN G V+ MA+QL
Sbjct: 233 SIDDFKTDIFLTFENAMVYNEDGSVVYDMAKQL 265
>gi|332253606|ref|XP_003275928.1| PREDICTED: bromodomain-containing protein 4 isoform 1 [Nomascus
leucogenys]
Length = 1364
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 47/110 (42%), Positives = 66/110 (60%), Gaps = 3/110 (2%)
Query: 369 SKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN 425
S+ K CS +L+++ KH W F PVDV+ LGLHDY II+HPMD+ T+K++L
Sbjct: 351 SEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAR 410
Query: 426 WYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
Y+ +EF DVRL F N YNP +V MA +L +FE ++ + E
Sbjct: 411 EYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE 460
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 60/107 (56%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+L+ L KH+ W F PVD L L DY+ II+ PMD+GT+K RL N+Y + +E +D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGA 484
F N YN G D+ +MAE L K+F K + +E M + A
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEETEIMIVQA 176
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 51/79 (64%), Gaps = 5/79 (6%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLF-QHDDEIEVDIDSVDAETLWEL 608
+ M+Y+EK++LS ++ LP EKL +V II+ R SL + DEIE+D +++ TL EL
Sbjct: 608 KPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLREL 667
Query: 609 DRFVTNYKKSLSKNKRKAE 627
+R+VT S + KRK +
Sbjct: 668 ERYVT----SCLRKKRKPQ 682
>gi|397484965|ref|XP_003813634.1| PREDICTED: LOW QUALITY PROTEIN: bromodomain-containing protein 4
[Pan paniscus]
Length = 1362
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 47/110 (42%), Positives = 66/110 (60%), Gaps = 3/110 (2%)
Query: 369 SKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN 425
S+ K CS +L+++ KH W F PVDV+ LGLHDY II+HPMD+ T+K++L
Sbjct: 351 SEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAR 410
Query: 426 WYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
Y+ +EF DVRL F N YNP +V MA +L +FE ++ + E
Sbjct: 411 EYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE 460
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 60/107 (56%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+L+ L KH+ W F PVD L L DY+ II+ PMD+GT+K RL N+Y + +E +D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGA 484
F N YN G D+ +MAE L K+F K + +E M + A
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEETEIMIVQA 176
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 51/79 (64%), Gaps = 5/79 (6%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLF-QHDDEIEVDIDSVDAETLWEL 608
+ M+Y+EK++LS ++ LP EKL +V II+ R SL + DEIE+D +++ TL EL
Sbjct: 608 KPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLREL 667
Query: 609 DRFVTNYKKSLSKNKRKAE 627
+R+VT S + KRK +
Sbjct: 668 ERYVT----SCLRKKRKPQ 682
>gi|344239383|gb|EGV95486.1| Bromodomain-containing protein 4 [Cricetulus griseus]
Length = 723
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 47/110 (42%), Positives = 67/110 (60%), Gaps = 3/110 (2%)
Query: 369 SKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN 425
S+ K CS +L+++ KH W F PVDV+ LGLHDY II+HPMD+ T+K++L
Sbjct: 352 SEQLKCCSVILKEMFTKKHASYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLESR 411
Query: 426 WYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
Y+ +EF DVRL F N YNP +V MA +L ++FE ++ + E
Sbjct: 412 EYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQEVFEMRFAKMPDE 461
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 54/92 (58%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
+L+ L KH+ W F PVD L L DY+ II+ PMD+GT+K RL N+Y + +E +D
Sbjct: 69 VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQD 128
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN G D+ +MAE L K+F K
Sbjct: 129 FNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 51/79 (64%), Gaps = 5/79 (6%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLF-QHDDEIEVDIDSVDAETLWEL 608
+ M+Y+EK++LS ++ LP EKL +V II+ R SL + DEIE+D +++ TL EL
Sbjct: 609 KPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLREL 668
Query: 609 DRFVTNYKKSLSKNKRKAE 627
+R+VT S + KRK +
Sbjct: 669 ERYVT----SCLRKKRKPQ 683
>gi|19718731|ref|NP_490597.1| bromodomain-containing protein 4 isoform long [Homo sapiens]
gi|20141192|sp|O60885.2|BRD4_HUMAN RecName: Full=Bromodomain-containing protein 4; AltName:
Full=Protein HUNK1
gi|16589003|gb|AAL26987.1|AF386649_1 bromodomain-containing 4 [Homo sapiens]
gi|119604879|gb|EAW84473.1| bromodomain containing 4, isoform CRA_d [Homo sapiens]
Length = 1362
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 47/110 (42%), Positives = 66/110 (60%), Gaps = 3/110 (2%)
Query: 369 SKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN 425
S+ K CS +L+++ KH W F PVDV+ LGLHDY II+HPMD+ T+K++L
Sbjct: 351 SEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAR 410
Query: 426 WYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
Y+ +EF DVRL F N YNP +V MA +L +FE ++ + E
Sbjct: 411 EYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE 460
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 60/107 (56%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+L+ L KH+ W F PVD L L DY+ II+ PMD+GT+K RL N+Y + +E +D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGA 484
F N YN G D+ +MAE L K+F K + +E M + A
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEETEIMIVQA 176
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 51/79 (64%), Gaps = 5/79 (6%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLF-QHDDEIEVDIDSVDAETLWEL 608
+ M+Y+EK++LS ++ LP EKL +V II+ R SL + DEIE+D +++ TL EL
Sbjct: 608 KPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLREL 667
Query: 609 DRFVTNYKKSLSKNKRKAE 627
+R+VT S + KRK +
Sbjct: 668 ERYVT----SCLRKKRKPQ 682
>gi|354485151|ref|XP_003504747.1| PREDICTED: bromodomain-containing protein 4 [Cricetulus griseus]
Length = 721
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 47/110 (42%), Positives = 67/110 (60%), Gaps = 3/110 (2%)
Query: 369 SKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN 425
S+ K CS +L+++ KH W F PVDV+ LGLHDY II+HPMD+ T+K++L
Sbjct: 352 SEQLKCCSVILKEMFTKKHASYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLESR 411
Query: 426 WYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
Y+ +EF DVRL F N YNP +V MA +L ++FE ++ + E
Sbjct: 412 EYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQEVFEMRFAKMPDE 461
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 54/92 (58%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
+L+ L KH+ W F PVD L L DY+ II+ PMD+GT+K RL N+Y + +E +D
Sbjct: 69 VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQD 128
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN G D+ +MAE L K+F K
Sbjct: 129 FNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 51/79 (64%), Gaps = 5/79 (6%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLF-QHDDEIEVDIDSVDAETLWEL 608
+ M+Y+EK++LS ++ LP EKL +V II+ R SL + DEIE+D +++ TL EL
Sbjct: 609 KPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLREL 668
Query: 609 DRFVTNYKKSLSKNKRKAE 627
+R+VT S + KRK +
Sbjct: 669 ERYVT----SCLRKKRKPQ 683
>gi|426387578|ref|XP_004060242.1| PREDICTED: bromodomain-containing protein 4 [Gorilla gorilla
gorilla]
Length = 1362
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 47/110 (42%), Positives = 66/110 (60%), Gaps = 3/110 (2%)
Query: 369 SKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN 425
S+ K CS +L+++ KH W F PVDV+ LGLHDY II+HPMD+ T+K++L
Sbjct: 351 SEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAR 410
Query: 426 WYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
Y+ +EF DVRL F N YNP +V MA +L +FE ++ + E
Sbjct: 411 EYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE 460
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 60/107 (56%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+L+ L KH+ W F PVD L L DY+ II+ PMD+GT+K RL N+Y + +E +D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGA 484
F N YN G D+ +MAE L K+F K + +E M + A
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEETEIMIVQA 176
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 51/79 (64%), Gaps = 5/79 (6%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLF-QHDDEIEVDIDSVDAETLWEL 608
+ M+Y+EK++LS ++ LP EKL +V II+ R SL + DEIE+D +++ TL EL
Sbjct: 608 KPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLREL 667
Query: 609 DRFVTNYKKSLSKNKRKAE 627
+R+VT S + KRK +
Sbjct: 668 ERYVT----SCLRKKRKPQ 682
>gi|197306302|gb|ACH59502.1| DNA-binding bromodomain-containing protein [Pseudotsuga menziesii]
gi|197306316|gb|ACH59509.1| DNA-binding bromodomain-containing protein [Pseudotsuga menziesii]
gi|197306318|gb|ACH59510.1| DNA-binding bromodomain-containing protein [Pseudotsuga menziesii]
gi|197306320|gb|ACH59511.1| DNA-binding bromodomain-containing protein [Pseudotsuga menziesii]
gi|197306322|gb|ACH59512.1| DNA-binding bromodomain-containing protein [Pseudotsuga menziesii]
gi|197306324|gb|ACH59513.1| DNA-binding bromodomain-containing protein [Pseudotsuga menziesii]
gi|197306332|gb|ACH59517.1| DNA-binding bromodomain-containing protein [Pseudotsuga menziesii]
gi|197306334|gb|ACH59518.1| DNA-binding bromodomain-containing protein [Pseudotsuga menziesii]
gi|197306336|gb|ACH59519.1| DNA-binding bromodomain-containing protein [Pseudotsuga menziesii]
Length = 139
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/140 (45%), Positives = 84/140 (60%), Gaps = 10/140 (7%)
Query: 436 DVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMR-IGADYEMGFHTPT 494
DVRLTF+NAMTYNP G +VH MAEQ+L+ FED+W I +Y E R + + G
Sbjct: 3 DVRLTFNNAMTYNPIGHEVHTMAEQMLQFFEDRWKPICEKYEEEKRKLSWSGDDGLLPGA 62
Query: 495 SRKAPPLPPPLDMRRILDRSESITHPMDSRLKPISTTPSSRTP------APKKPKAKDPH 548
S+ LP ++ L ++E + + +P S P APKKPKAKDPH
Sbjct: 63 SQNIKKLPSCEPTKKNLKKTEPL---LGLSPRPPPNAKSKANPVLRPFAAPKKPKAKDPH 119
Query: 549 KRDMTYDEKQKLSTNLQSLP 568
KR+MT++EKQKLS +LQSLP
Sbjct: 120 KREMTFEEKQKLSGSLQSLP 139
>gi|297703913|ref|XP_002828869.1| PREDICTED: bromodomain-containing protein 4 isoform 2 [Pongo
abelii]
Length = 1363
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 47/110 (42%), Positives = 66/110 (60%), Gaps = 3/110 (2%)
Query: 369 SKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN 425
S+ K CS +L+++ KH W F PVDV+ LGLHDY II+HPMD+ T+K++L
Sbjct: 351 SEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAR 410
Query: 426 WYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
Y+ +EF DVRL F N YNP +V MA +L +FE ++ + E
Sbjct: 411 EYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE 460
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 60/107 (56%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+L+ L KH+ W F PVD L L DY+ II+ PMD+GT+K RL N+Y + +E +D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGA 484
F N YN G D+ +MAE L K+F K + +E M + A
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEETEIMIVQA 176
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 51/79 (64%), Gaps = 5/79 (6%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLF-QHDDEIEVDIDSVDAETLWEL 608
+ M+Y+EK++LS ++ LP EKL +V II+ R SL + DEIE+D +++ TL EL
Sbjct: 608 KPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLREL 667
Query: 609 DRFVTNYKKSLSKNKRKAE 627
+R+VT S + KRK +
Sbjct: 668 ERYVT----SCLRKKRKPQ 682
>gi|403308909|ref|XP_003944882.1| PREDICTED: bromodomain-containing protein 4 [Saimiri boliviensis
boliviensis]
Length = 1334
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 47/110 (42%), Positives = 66/110 (60%), Gaps = 3/110 (2%)
Query: 369 SKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN 425
S+ K CS +L+++ KH W F PVDV+ LGLHDY II+HPMD+ T+K++L
Sbjct: 375 SEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAR 434
Query: 426 WYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
Y+ +EF DVRL F N YNP +V MA +L +FE ++ + E
Sbjct: 435 EYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE 484
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 60/107 (56%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+L+ L KH+ W F PVD L L DY+ II+ PMD+GT+K RL N+Y + +E +D
Sbjct: 94 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 153
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGA 484
F N YN G D+ +MAE L K+F K + +E M + A
Sbjct: 154 NTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEETEIMIVQA 200
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 51/79 (64%), Gaps = 5/79 (6%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLF-QHDDEIEVDIDSVDAETLWEL 608
+ M+Y+EK++LS ++ LP EKL +V II+ R SL + DEIE+D +++ TL EL
Sbjct: 632 KPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLREL 691
Query: 609 DRFVTNYKKSLSKNKRKAE 627
+R+VT S + KRK +
Sbjct: 692 ERYVT----SCLRKKRKPQ 706
>gi|402904600|ref|XP_003915131.1| PREDICTED: bromodomain-containing protein 4 [Papio anubis]
Length = 1300
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 47/110 (42%), Positives = 66/110 (60%), Gaps = 3/110 (2%)
Query: 369 SKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN 425
S+ K CS +L+++ KH W F PVDV+ LGLHDY II+HPMD+ T+K++L
Sbjct: 351 SEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAR 410
Query: 426 WYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
Y+ +EF DVRL F N YNP +V MA +L +FE ++ + E
Sbjct: 411 EYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE 460
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 60/107 (56%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+L+ L KH+ W F PVD L L DY+ II+ PMD+GT+K RL N+Y + +E +D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGA 484
F N YN G D+ +MAE L K+F K + +E M + A
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEETEIMIVQA 176
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 51/79 (64%), Gaps = 5/79 (6%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLF-QHDDEIEVDIDSVDAETLWEL 608
+ M+Y+EK++LS ++ LP EKL +V II+ R SL + DEIE+D +++ TL EL
Sbjct: 608 KPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLREL 667
Query: 609 DRFVTNYKKSLSKNKRKAE 627
+R+VT S + KRK +
Sbjct: 668 ERYVT----SCLRKKRKPQ 682
>gi|325652134|ref|NP_001191701.1| bromodomain-containing protein 4 [Sus scrofa]
gi|321172828|gb|ADW77216.1| bromodomain-containing protein 4 [Sus scrofa]
Length = 1368
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 47/110 (42%), Positives = 66/110 (60%), Gaps = 3/110 (2%)
Query: 369 SKIFKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN 425
S+ K CS +L+++ KH W F PVDV+ LGLHDY II+HPMD+ T+K++L
Sbjct: 351 SEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAR 410
Query: 426 WYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
Y+ +EF DVRL F N YNP +V MA +L +FE ++ + E
Sbjct: 411 EYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE 460
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 60/107 (56%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+L+ L KH+ W F PVD L L DY+ II+ PMD+GT+K RL N+Y + +E +D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGA 484
F N YN G D+ +MAE L K+F K + +E M + A
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEETEIMIVQA 176
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 51/79 (64%), Gaps = 5/79 (6%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLF-QHDDEIEVDIDSVDAETLWEL 608
R M+YDEK++LS ++ LP EKL +V II+ R SL + DEIE+D +++ TL EL
Sbjct: 608 RPMSYDEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLREL 667
Query: 609 DRFVTNYKKSLSKNKRKAE 627
+R+VT S + KRK +
Sbjct: 668 ERYVT----SCLRKKRKPQ 682
>gi|149732108|ref|XP_001496282.1| PREDICTED: bromodomain-containing protein 2-like [Equus caballus]
Length = 804
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 66/113 (58%), Gaps = 3/113 (2%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G S+ K C+ +L++L+ KH W F PVD LGLHDY II+HPMDL TVK ++
Sbjct: 344 GKLSEQLKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKM 403
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
Y+ +EFA DVRL F N YNP DV MA +L +FE ++ + E
Sbjct: 404 ENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDE 456
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 54/98 (55%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD LGL DY II+ PMD+GT+K RL N+Y + E +D
Sbjct: 86 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDF 145
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
F N YN D+ +MA+ L KIF K + E
Sbjct: 146 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQE 183
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 49/77 (63%), Gaps = 4/77 (5%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLF-QHDDEIEVDIDSVDAETLWEL 608
R M+YDEK++LS ++ LP EKL +V II+ R SL + +EIE+D +++ TL EL
Sbjct: 643 RPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREPSLRDSNPEEIEIDFETLKPSTLREL 702
Query: 609 DRFVTNYKKSLSKNKRK 625
+R+V + L K RK
Sbjct: 703 ERYVLS---CLRKKPRK 716
>gi|395847805|ref|XP_003796555.1| PREDICTED: bromodomain-containing protein 4 [Otolemur garnettii]
Length = 1366
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 47/110 (42%), Positives = 66/110 (60%), Gaps = 3/110 (2%)
Query: 369 SKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN 425
S+ K CS +L+++ KH W F PVDV+ LGLHDY II+HPMD+ T+K++L
Sbjct: 351 SEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAR 410
Query: 426 WYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
Y+ +EF DVRL F N YNP +V MA +L +FE ++ + E
Sbjct: 411 EYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE 460
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 60/107 (56%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+L+ L KH+ W F PVD L L DY+ II+ PMD+GT+K RL N+Y + +E +D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGA 484
F N YN G D+ +MAE L K+F K + +E M + A
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEETEIMIVQA 176
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 51/79 (64%), Gaps = 5/79 (6%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLF-QHDDEIEVDIDSVDAETLWEL 608
+ M+Y+EK++LS ++ LP EKL +V II+ R SL + DEIE+D +++ TL EL
Sbjct: 608 KPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLREL 667
Query: 609 DRFVTNYKKSLSKNKRKAE 627
+R+VT S + KRK +
Sbjct: 668 ERYVT----SCLRKKRKPQ 682
>gi|281343180|gb|EFB18764.1| hypothetical protein PANDA_018131 [Ailuropoda melanoleuca]
Length = 1230
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 47/110 (42%), Positives = 66/110 (60%), Gaps = 3/110 (2%)
Query: 369 SKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN 425
S+ K CS +L+++ KH W F PVDV+ LGLHDY II+HPMD+ T+K++L
Sbjct: 351 SEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAR 410
Query: 426 WYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
Y+ +EF DVRL F N YNP +V MA +L +FE ++ + E
Sbjct: 411 EYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE 460
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 60/107 (56%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+L+ L KH+ W F PVD L L DY+ II+ PMD+GT+K RL N+Y + +E +D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGA 484
F N YN G D+ +MAE L K+F K + +E M + A
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEETEIMIVQA 176
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 51/79 (64%), Gaps = 5/79 (6%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLF-QHDDEIEVDIDSVDAETLWEL 608
+ M+Y+EK++LS ++ LP EKL +V II+ R SL + DEIE+D +++ TL EL
Sbjct: 608 KPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLREL 667
Query: 609 DRFVTNYKKSLSKNKRKAE 627
+R+VT S + KRK +
Sbjct: 668 ERYVT----SCLRKKRKPQ 682
>gi|270001347|gb|EEZ97794.1| hypothetical protein TcasGA2_TC030708 [Tribolium castaneum]
Length = 815
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 86/170 (50%), Gaps = 32/170 (18%)
Query: 338 DKFPPAESNKKSKLNGKKQAGNEL----------AHGFGTGSKIF--------------- 372
D PP ES+K +K++ ++++G ++ H I+
Sbjct: 294 DYNPPLESSKSAKISTRRESGRQIKKPSMDVFVPYHQANITPPIYTSTPQMPAHKPKEKL 353
Query: 373 ----KSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN 425
KSC+ +L++L KH W F PVD + L LHDY II+ PMDLGTVK +++
Sbjct: 354 TEALKSCNEILKELFSKKHSSYAWPFYKPVDAELLMLHDYHDIIKKPMDLGTVKQKMDNR 413
Query: 426 WYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
Y+S +EFA DVRL F N YNP DV MA +L +FE K+ I E
Sbjct: 414 EYRSAQEFAADVRLIFTNCYKYNPSDHDVVAMARKLQDVFEVKFAKIPDE 463
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 56/91 (61%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+L+ + KH+ W F PVD K L L DY II+ PMDLGT+K RL+ N+Y S KE +D
Sbjct: 46 VLKAVWKHQFAWPFRQPVDAKKLNLPDYHQIIQQPMDLGTIKKRLDNNYYWSGKECIQDF 105
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN G+DV +MA+ L K+F K
Sbjct: 106 NTMFTNCYVYNKPGEDVVVMAQTLEKVFLTK 136
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWEL 608
+ M+YDEK++LS ++ LP +KL +V II+ R SL + DEIE+D +++ TL EL
Sbjct: 653 KPMSYDEKRQLSLDINKLPGDKLGRVVHIIQSREPSLRDSNPDEIEIDFETLKPSTLREL 712
Query: 609 DRFVTN 614
+ +V +
Sbjct: 713 ESYVAS 718
>gi|344298832|ref|XP_003421095.1| PREDICTED: bromodomain-containing protein 2 [Loxodonta africana]
Length = 798
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 66/113 (58%), Gaps = 3/113 (2%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G S+ K C+ +L++L+ KH W F PVD LGLHDY II+HPMDL TVK ++
Sbjct: 344 GKLSEQLKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKM 403
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
Y+ +EFA DVRL F N YNP DV MA +L +FE ++ + E
Sbjct: 404 ENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDE 456
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 54/98 (55%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD LGL DY II+ PMD+GT+K RL N+Y + E +D
Sbjct: 86 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDF 145
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
F N YN D+ +MA+ L KIF K + E
Sbjct: 146 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQE 183
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 49/77 (63%), Gaps = 4/77 (5%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLF-QHDDEIEVDIDSVDAETLWEL 608
R M+YDEK++LS ++ LP EKL +V II+ R SL + +EIE+D +++ TL EL
Sbjct: 637 RPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREPSLRDSNPEEIEIDFETLKPSTLREL 696
Query: 609 DRFVTNYKKSLSKNKRK 625
+R+V + L K RK
Sbjct: 697 ERYVLS---CLRKKPRK 710
>gi|296197845|ref|XP_002746465.1| PREDICTED: bromodomain-containing protein 2 isoform 1 [Callithrix
jacchus]
Length = 800
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 66/113 (58%), Gaps = 3/113 (2%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G S+ K C+ +L++L+ KH W F PVD LGLHDY II+HPMDL TVK ++
Sbjct: 344 GKLSEQLKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKM 403
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
Y+ +EFA DVRL F N YNP DV MA +L +FE ++ + E
Sbjct: 404 ENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDE 456
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 54/98 (55%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD LGL DY II+ PMD+GT+K RL N+Y + E +D
Sbjct: 86 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDF 145
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
F N YN D+ +MA+ L KIF K + E
Sbjct: 146 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQE 183
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 49/77 (63%), Gaps = 4/77 (5%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLF-QHDDEIEVDIDSVDAETLWEL 608
R M+YDEK++LS ++ LP EKL +V II+ R SL + +EIE+D +++ TL EL
Sbjct: 639 RPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREPSLRDSNPEEIEIDFETLKPSTLREL 698
Query: 609 DRFVTNYKKSLSKNKRK 625
+R+V + L K RK
Sbjct: 699 ERYVLS---CLRKKPRK 712
>gi|3184498|gb|AAC27978.1| R31546_1 [Homo sapiens]
Length = 731
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 74/135 (54%), Gaps = 5/135 (3%)
Query: 369 SKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN 425
S+ K CS +L+++ KH W F PVDV+ LGLHDY II+HPMD+ T+K++L
Sbjct: 362 SEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAR 421
Query: 426 WYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGAD 485
Y+ +EF DVRL F N YNP +V MA +L +FE ++ + E E + A
Sbjct: 422 EYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE--PEEPVVAV 479
Query: 486 YEMGFHTPTSRKAPP 500
PT APP
Sbjct: 480 SSPAVPPPTKVVAPP 494
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 60/108 (55%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
+L+ L KH+ W F PVD L L DY+ II+ PMD+GT+K RL N+Y + +E +D
Sbjct: 80 VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQD 139
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGA 484
F N YN G D+ +MAE L K+F K + +E M + A
Sbjct: 140 FNTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEETEIMIVQA 187
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 51/79 (64%), Gaps = 5/79 (6%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLF-QHDDEIEVDIDSVDAETLWEL 608
+ M+Y+EK++LS ++ LP EKL +V II+ R SL + DEIE+D +++ TL EL
Sbjct: 619 KPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLREL 678
Query: 609 DRFVTNYKKSLSKNKRKAE 627
+R+VT S + KRK +
Sbjct: 679 ERYVT----SCLRKKRKPQ 693
>gi|301785596|ref|XP_002928216.1| PREDICTED: bromodomain-containing protein 4-like [Ailuropoda
melanoleuca]
Length = 1260
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 47/110 (42%), Positives = 66/110 (60%), Gaps = 3/110 (2%)
Query: 369 SKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN 425
S+ K CS +L+++ KH W F PVDV+ LGLHDY II+HPMD+ T+K++L
Sbjct: 351 SEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAR 410
Query: 426 WYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
Y+ +EF DVRL F N YNP +V MA +L +FE ++ + E
Sbjct: 411 EYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE 460
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 60/107 (56%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+L+ L KH+ W F PVD L L DY+ II+ PMD+GT+K RL N+Y + +E +D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGA 484
F N YN G D+ +MAE L K+F K + +E M + A
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEETEIMIVQA 176
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 51/79 (64%), Gaps = 5/79 (6%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLF-QHDDEIEVDIDSVDAETLWEL 608
+ M+Y+EK++LS ++ LP EKL +V II+ R SL + DEIE+D +++ TL EL
Sbjct: 608 KPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLREL 667
Query: 609 DRFVTNYKKSLSKNKRKAE 627
+R+VT S + KRK +
Sbjct: 668 ERYVT----SCLRKKRKPQ 682
>gi|367014125|ref|XP_003681562.1| hypothetical protein TDEL_0E01080 [Torulaspora delbrueckii]
gi|359749223|emb|CCE92351.1| hypothetical protein TDEL_0E01080 [Torulaspora delbrueckii]
Length = 616
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 89/279 (31%), Positives = 135/279 (48%), Gaps = 30/279 (10%)
Query: 372 FKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNW-Y 427
K CS ++++L KH + F PVD L YF ++ PMDLGTV LN NW Y
Sbjct: 252 MKFCSGVVKELTSKKHAAFNYPFLEPVDPVALNCPTYFDYVKEPMDLGTVSKNLN-NWKY 310
Query: 428 KSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWV---VIE----SEYNREM 480
++ +EF DVRL F N +NP+G V+ M +L IF KW +IE E +R
Sbjct: 311 QTLEEFERDVRLVFENCYKFNPEGTIVNQMGHRLEDIFNSKWAERPIIEDYESDEDSRSD 370
Query: 481 RIGADYEMGFH------------TPTSRKAPPLPPPLDMRRI----LDRSESITHPMDSR 524
G DY+ F+ + T+ L LD +I L R E + R
Sbjct: 371 LNGYDYDSEFYNSNDSDSIIDESSITNPAIQYLENQLDRMKIELQQLKRQELDKIRKERR 430
Query: 525 LKPISTTPSSRTPAPKKPKAKDPHKRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNS 584
L + S R+ P K K +TYD K+ ++ ++ LP+ KL+ ++ IIK+
Sbjct: 431 LARGARKRSRRSKRTTDPSRKRRFKTVVTYDMKKVITEHINDLPTAKLEKVIGIIKRSMP 490
Query: 585 SLFQHDDEIEVDIDSVDAETLWEL-DRFVTNYKKSLSKN 622
L + D+E+E+D+D++D T+ L + F Y ++ N
Sbjct: 491 HLAE-DEEVELDLDTLDNSTILTLYNTFFREYDQAHDMN 528
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%)
Query: 391 FNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPK 450
F PVD L + YF ++ PMDLGT++ +L + Y P+E D L N +T+N
Sbjct: 107 FLKPVDPVALNIPKYFETVKKPMDLGTIERKLQNDSYGQPEEVNADFDLMVSNCVTFNGA 166
Query: 451 GQDVHIMAEQLLKIFE 466
+ MA + FE
Sbjct: 167 QATISQMARNIQAAFE 182
>gi|356532581|ref|XP_003534850.1| PREDICTED: transcription factor GTE1-like [Glycine max]
Length = 578
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 109/404 (26%), Positives = 176/404 (43%), Gaps = 74/404 (18%)
Query: 260 VLPVSDVVDNG---IKRGHSEVASVGVPVTRVGITRPSRPLNQLSISTVENSLGLSENVE 316
+L V DV +G +K +E + + +R +L I T G+ E V+
Sbjct: 201 LLFVRDVQKDGAVRLKYCKTEDELANIFTKLLAKSRFEDLRERLEICTYLMQRGVFERVQ 260
Query: 317 K----EKRTPKANQFYR--NSEFLLAKDKFPPAE--SNKKSKLNGKKQAGN------ELA 362
E++ + ++Y N + AKDK K+S+ G + N E+
Sbjct: 261 MCASLEEQVAEVQKYYSTINDQVNNAKDKSQEKHVIGTKRSRQGGSSKEANSSNTMKEVM 320
Query: 363 HGFGTGSKIFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
H F T + ++ +H+ W F PVDV+ LGL DY+ II PMD GT+K ++
Sbjct: 321 HQFST----------IFHQITQHRWAWPFMDPVDVEGLGLSDYYQIIEKPMDFGTIKRKM 370
Query: 423 NK---NWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWV-----VIES 474
+ + YK+ ++ DV L F NAM YN + D+HIMA+ L + FE KW+ V ++
Sbjct: 371 DAKDGSGYKNVRQIYSDVTLVFKNAMKYNDEKTDIHIMAKTLREKFEKKWLQLLPKVAQA 430
Query: 475 EYNREMRIGADYEMGFHTPTSRKAPPLPPPLDMRRILDRSESITHPMDSRLKPISTTPSS 534
E +E + + +A D+R L +D +LK +
Sbjct: 431 ESEKE-----EARALLKAKLAEEAAYANMTKDIRHAL-------CDVDEQLKNL------ 472
Query: 535 RTPAPKKPKAKDPHKRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDD-EI 593
+ KK + H EK L NL L + L + II + + + FQHD ++
Sbjct: 473 KEMVIKKCRKLSTH-------EKLALKKNLNRLNGDNLLKAMAIIHEIDPT-FQHDAPQV 524
Query: 594 EVDIDSVDAETLWELDRFVTNYKKSLSKNKRKAELANQARAVAQ 637
++D+D LW+L+ FV K L +Q +AVA+
Sbjct: 525 DLDLDCQSDFILWKLNMFV------------KEALEDQDKAVAE 556
>gi|332253608|ref|XP_003275929.1| PREDICTED: bromodomain-containing protein 4 isoform 2 [Nomascus
leucogenys]
Length = 722
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 47/110 (42%), Positives = 66/110 (60%), Gaps = 3/110 (2%)
Query: 369 SKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN 425
S+ K CS +L+++ KH W F PVDV+ LGLHDY II+HPMD+ T+K++L
Sbjct: 351 SEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAR 410
Query: 426 WYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
Y+ +EF DVRL F N YNP +V MA +L +FE ++ + E
Sbjct: 411 EYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE 460
Score = 92.4 bits (228), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 60/108 (55%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
+L+ L KH+ W F PVD L L DY+ II+ PMD+GT+K RL N+Y + +E +D
Sbjct: 69 VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQD 128
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGA 484
F N YN G D+ +MAE L K+F K + +E M + A
Sbjct: 129 FNTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEETEIMIVQA 176
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 51/79 (64%), Gaps = 5/79 (6%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLF-QHDDEIEVDIDSVDAETLWEL 608
+ M+Y+EK++LS ++ LP EKL +V II+ R SL + DEIE+D +++ TL EL
Sbjct: 608 KPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLREL 667
Query: 609 DRFVTNYKKSLSKNKRKAE 627
+R+VT S + KRK +
Sbjct: 668 ERYVT----SCLRKKRKPQ 682
>gi|114052340|ref|NP_001039331.1| bromodomain-containing protein 2 [Bos taurus]
gi|108935958|sp|Q32S26.1|BRD2_BOVIN RecName: Full=Bromodomain-containing protein 2
gi|63169167|gb|AAY34703.1| bromodomain containing 2 [Bos taurus]
gi|296474561|tpg|DAA16676.1| TPA: bromodomain-containing protein 2 [Bos taurus]
Length = 803
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 66/113 (58%), Gaps = 3/113 (2%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G S+ K C+ +L++L+ KH W F PVD LGLHDY II+HPMDL TVK ++
Sbjct: 344 GKLSEQLKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKM 403
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
Y+ +EFA DVRL F N YNP DV MA +L +FE ++ + E
Sbjct: 404 ENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDE 456
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 54/98 (55%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD LGL DY II+ PMD+GT+K RL N+Y + E +D
Sbjct: 86 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDF 145
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
F N YN D+ +MA+ L KIF K + E
Sbjct: 146 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQE 183
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 49/77 (63%), Gaps = 4/77 (5%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLF-QHDDEIEVDIDSVDAETLWEL 608
R M+YDEK++LS ++ LP EKL +V II+ R SL + +EIE+D +++ TL EL
Sbjct: 642 RPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREPSLRDSNPEEIEIDFETLKPSTLREL 701
Query: 609 DRFVTNYKKSLSKNKRK 625
+R+V + L K RK
Sbjct: 702 ERYVLS---CLRKKPRK 715
>gi|403261524|ref|XP_003923168.1| PREDICTED: bromodomain-containing protein 2 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 800
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 66/113 (58%), Gaps = 3/113 (2%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G S+ K C+ +L++L+ KH W F PVD LGLHDY II+HPMDL TVK ++
Sbjct: 344 GKLSEQLKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKM 403
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
Y+ +EFA DVRL F N YNP DV MA +L +FE ++ + E
Sbjct: 404 ENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDE 456
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 54/98 (55%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD LGL DY II+ PMD+GT+K RL N+Y + E +D
Sbjct: 86 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDF 145
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
F N YN D+ +MA+ L KIF K + E
Sbjct: 146 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQE 183
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 49/77 (63%), Gaps = 4/77 (5%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLF-QHDDEIEVDIDSVDAETLWEL 608
R M+YDEK++LS ++ LP EKL +V II+ R SL + +EIE+D +++ TL EL
Sbjct: 639 RPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREPSLRDSNPEEIEIDFETLKPSTLREL 698
Query: 609 DRFVTNYKKSLSKNKRK 625
+R+V + L K RK
Sbjct: 699 ERYVLS---CLRKKPRK 712
>gi|395832114|ref|XP_003789121.1| PREDICTED: bromodomain-containing protein 2 isoform 1 [Otolemur
garnettii]
Length = 791
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 66/113 (58%), Gaps = 3/113 (2%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G S+ K C+ +L++L+ KH W F PVD LGLHDY II+HPMDL TVK ++
Sbjct: 335 GKLSEQLKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKM 394
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
Y+ +EFA DVRL F N YNP DV MA +L +FE ++ + E
Sbjct: 395 ENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDE 447
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 54/98 (55%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD LGL DY II+ PMD+GT+K RL ++Y + E +D
Sbjct: 77 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENSYYWAASECMQDF 136
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
F N YN D+ +MA+ L KIF K + E
Sbjct: 137 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQE 174
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 49/77 (63%), Gaps = 4/77 (5%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLF-QHDDEIEVDIDSVDAETLWEL 608
R M+YDEK++LS ++ LP EKL +V II+ R SL + +EIE+D +++ TL EL
Sbjct: 630 RPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREPSLRDSNPEEIEIDFETLKPSTLREL 689
Query: 609 DRFVTNYKKSLSKNKRK 625
+R+V + L K RK
Sbjct: 690 ERYVLS---CLRKKPRK 703
>gi|7657218|ref|NP_055114.1| bromodomain-containing protein 4 isoform short [Homo sapiens]
gi|3115204|emb|CAA72780.1| HUNKI [Homo sapiens]
gi|119604875|gb|EAW84469.1| bromodomain containing 4, isoform CRA_a [Homo sapiens]
gi|410224242|gb|JAA09340.1| bromodomain containing 4 [Pan troglodytes]
gi|410259614|gb|JAA17773.1| bromodomain containing 4 [Pan troglodytes]
gi|410299992|gb|JAA28596.1| bromodomain containing 4 [Pan troglodytes]
Length = 722
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 74/135 (54%), Gaps = 5/135 (3%)
Query: 369 SKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN 425
S+ K CS +L+++ KH W F PVDV+ LGLHDY II+HPMD+ T+K++L
Sbjct: 351 SEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAR 410
Query: 426 WYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGAD 485
Y+ +EF DVRL F N YNP +V MA +L +FE ++ + E E + A
Sbjct: 411 EYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE--PEEPVVAV 468
Query: 486 YEMGFHTPTSRKAPP 500
PT APP
Sbjct: 469 SSPAVPPPTKVVAPP 483
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 60/108 (55%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
+L+ L KH+ W F PVD L L DY+ II+ PMD+GT+K RL N+Y + +E +D
Sbjct: 69 VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQD 128
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGA 484
F N YN G D+ +MAE L K+F K + +E M + A
Sbjct: 129 FNTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEETEIMIVQA 176
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 51/79 (64%), Gaps = 5/79 (6%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLF-QHDDEIEVDIDSVDAETLWEL 608
+ M+Y+EK++LS ++ LP EKL +V II+ R SL + DEIE+D +++ TL EL
Sbjct: 608 KPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLREL 667
Query: 609 DRFVTNYKKSLSKNKRKAE 627
+R+VT S + KRK +
Sbjct: 668 ERYVT----SCLRKKRKPQ 682
>gi|4826806|ref|NP_005095.1| bromodomain-containing protein 2 isoform 1 [Homo sapiens]
gi|164419758|ref|NP_001106653.1| bromodomain-containing protein 2 isoform 1 [Homo sapiens]
gi|426352675|ref|XP_004043835.1| PREDICTED: bromodomain-containing protein 2 isoform 1 [Gorilla
gorilla gorilla]
gi|426352677|ref|XP_004043836.1| PREDICTED: bromodomain-containing protein 2 isoform 2 [Gorilla
gorilla gorilla]
gi|12230989|sp|P25440.2|BRD2_HUMAN RecName: Full=Bromodomain-containing protein 2; AltName:
Full=O27.1.1; AltName: Full=Really interesting new gene
3 protein
gi|577293|dbj|BAA07641.1| KIAA9001 [Homo sapiens]
gi|2980663|emb|CAA43996.1| FSH [Homo sapiens]
gi|52545950|emb|CAH56171.1| hypothetical protein [Homo sapiens]
gi|119624068|gb|EAX03663.1| bromodomain containing 2, isoform CRA_b [Homo sapiens]
gi|119624069|gb|EAX03664.1| bromodomain containing 2, isoform CRA_b [Homo sapiens]
gi|119624071|gb|EAX03666.1| bromodomain containing 2, isoform CRA_b [Homo sapiens]
gi|168277492|dbj|BAG10724.1| bromodomain-containing protein 2 [synthetic construct]
Length = 801
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 66/113 (58%), Gaps = 3/113 (2%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G S+ K C+ +L++L+ KH W F PVD LGLHDY II+HPMDL TVK ++
Sbjct: 344 GKLSEQLKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKM 403
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
Y+ +EFA DVRL F N YNP DV MA +L +FE ++ + E
Sbjct: 404 ENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDE 456
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 54/98 (55%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD LGL DY II+ PMD+GT+K RL N+Y + E +D
Sbjct: 86 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDF 145
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
F N YN D+ +MA+ L KIF K + E
Sbjct: 146 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQE 183
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 49/77 (63%), Gaps = 4/77 (5%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLF-QHDDEIEVDIDSVDAETLWEL 608
R M+YDEK++LS ++ LP EKL +V II+ R SL + +EIE+D +++ TL EL
Sbjct: 640 RPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREPSLRDSNPEEIEIDFETLKPSTLREL 699
Query: 609 DRFVTNYKKSLSKNKRK 625
+R+V + L K RK
Sbjct: 700 ERYVLS---CLRKKPRK 713
>gi|297290567|ref|XP_001115810.2| PREDICTED: hypothetical protein LOC717893 isoform 2 [Macaca
mulatta]
Length = 755
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 66/113 (58%), Gaps = 3/113 (2%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G S+ K C+ +L++L+ KH W F PVD LGLHDY II+HPMDL TVK ++
Sbjct: 297 GKLSEQLKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKM 356
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
Y+ +EFA DVRL F N YNP DV MA +L +FE ++ + E
Sbjct: 357 ENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDE 409
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 54/98 (55%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD LGL DY II+ PMD+GT+K RL N+Y + E +D
Sbjct: 39 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDF 98
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
F N YN D+ +MA+ L KIF K + E
Sbjct: 99 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQE 136
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 49/77 (63%), Gaps = 4/77 (5%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLF-QHDDEIEVDIDSVDAETLWEL 608
R M+YDEK++LS ++ LP EKL +V II+ R SL + +EIE+D +++ TL EL
Sbjct: 594 RPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREPSLRDSNPEEIEIDFETLKPSTLREL 653
Query: 609 DRFVTNYKKSLSKNKRK 625
+R+V + L K RK
Sbjct: 654 ERYVLS---CLRKKPRK 667
>gi|52545923|emb|CAH56179.1| hypothetical protein [Homo sapiens]
Length = 754
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 66/113 (58%), Gaps = 3/113 (2%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G S+ K C+ +L++L+ KH W F PVD LGLHDY II+HPMDL TVK ++
Sbjct: 297 GKLSEQLKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKM 356
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
Y+ +EFA DVRL F N YNP DV MA +L +FE ++ + E
Sbjct: 357 ENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDE 409
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 54/98 (55%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD LGL DY II+ PMD+GT+K RL N+Y + E +D
Sbjct: 39 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDF 98
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
F N YN D+ +MA+ L KIF K + E
Sbjct: 99 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQE 136
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 49/77 (63%), Gaps = 4/77 (5%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLF-QHDDEIEVDIDSVDAETLWEL 608
R M+YDEK++LS ++ LP EKL +V II+ R SL + +EIE+D +++ TL EL
Sbjct: 593 RPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREPSLRDSNPEEIEIDFETLKPSTLREL 652
Query: 609 DRFVTNYKKSLSKNKRK 625
+R+V + L K RK
Sbjct: 653 ERYVLS---CLRKKPRK 666
>gi|313747419|ref|NP_001186385.1| bromodomain-containing protein 2 isoform 3 [Homo sapiens]
gi|426352681|ref|XP_004043838.1| PREDICTED: bromodomain-containing protein 2 isoform 4 [Gorilla
gorilla gorilla]
gi|182769|gb|AAA68890.1| putative [Homo sapiens]
Length = 754
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 66/113 (58%), Gaps = 3/113 (2%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G S+ K C+ +L++L+ KH W F PVD LGLHDY II+HPMDL TVK ++
Sbjct: 297 GKLSEQLKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKM 356
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
Y+ +EFA DVRL F N YNP DV MA +L +FE ++ + E
Sbjct: 357 ENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDE 409
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 54/98 (55%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD LGL DY II+ PMD+GT+K RL N+Y + E +D
Sbjct: 39 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDF 98
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
F N YN D+ +MA+ L KIF K + E
Sbjct: 99 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQE 136
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 49/77 (63%), Gaps = 4/77 (5%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLF-QHDDEIEVDIDSVDAETLWEL 608
R M+YDEK++LS ++ LP EKL +V II+ R SL + +EIE+D +++ TL EL
Sbjct: 593 RPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREPSLRDSNPEEIEIDFETLKPSTLREL 652
Query: 609 DRFVTNYKKSLSKNKRK 625
+R+V + L K RK
Sbjct: 653 ERYVLS---CLRKKPRK 666
>gi|444519083|gb|ELV12566.1| Bromodomain-containing protein 2 [Tupaia chinensis]
Length = 743
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 66/113 (58%), Gaps = 3/113 (2%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G S+ K C+ +L++L+ KH W F PVD LGLHDY II+HPMDL TVK ++
Sbjct: 284 GKLSEQLKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKM 343
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
Y+ +EFA DVRL F N YNP DV MA +L +FE ++ + E
Sbjct: 344 ENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDE 396
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 54/98 (55%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD LGL DY II+ PMD+GT+K RL N+Y + E +D
Sbjct: 89 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDF 148
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
F N YN D+ +MA+ L KIF K + E
Sbjct: 149 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQE 186
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 49/77 (63%), Gaps = 4/77 (5%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWEL 608
R M+YDEK++LS ++ LP EKL +V II+ R SL + +EIE+D +++ TL EL
Sbjct: 582 RPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREPSLRDSNPEEIEIDFETLKPSTLREL 641
Query: 609 DRFVTNYKKSLSKNKRK 625
+R+V + L K RK
Sbjct: 642 ERYVLS---CLRKKPRK 655
>gi|226246640|ref|NP_932762.2| bromodomain-containing protein 4 isoform 2 [Mus musculus]
gi|148708380|gb|EDL40327.1| bromodomain containing 4, isoform CRA_b [Mus musculus]
gi|187951219|gb|AAI38836.1| Bromodomain containing 4 [Mus musculus]
gi|187952057|gb|AAI38835.1| Bromodomain containing 4 [Mus musculus]
Length = 723
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 76/137 (55%), Gaps = 6/137 (4%)
Query: 342 PAESNKKSKLNGKKQAGNELAHGFGTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVK 398
P + KK + ++ G E + S+ K CS +L+++ KH W F PVDV+
Sbjct: 328 PVKPPKKDVPDSQQHPGPEKSSKI---SEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVE 384
Query: 399 NLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMA 458
LGLHDY II+HPMD+ T+K++L Y+ +EF DVRL F N YNP +V MA
Sbjct: 385 ALGLHDYCDIIKHPMDMSTIKSKLESREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMA 444
Query: 459 EQLLKIFEDKWVVIESE 475
+L +FE ++ + E
Sbjct: 445 RKLQDVFEMRFAKMPDE 461
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 60/108 (55%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
+L+ L KH+ W F PVD L L DY+ II+ PMD+GT+K RL N+Y + +E +D
Sbjct: 69 VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQD 128
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGA 484
F N YN G D+ +MAE L K+F K + +E M + A
Sbjct: 129 FNTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEETEIMIVQA 176
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 51/79 (64%), Gaps = 5/79 (6%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLF-QHDDEIEVDIDSVDAETLWEL 608
+ M+Y+EK++LS ++ LP EKL +V II+ R SL + DEIE+D +++ TL EL
Sbjct: 609 KPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLREL 668
Query: 609 DRFVTNYKKSLSKNKRKAE 627
+R+VT S + KRK +
Sbjct: 669 ERYVT----SCLRKKRKPQ 683
>gi|114606788|ref|XP_001167666.1| PREDICTED: bromodomain-containing protein 2 isoform 1 [Pan
troglodytes]
Length = 753
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 66/113 (58%), Gaps = 3/113 (2%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G S+ K C+ +L++L+ KH W F PVD LGLHDY II+HPMDL TVK ++
Sbjct: 297 GKLSEQLKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKM 356
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
Y+ +EFA DVRL F N YNP DV MA +L +FE ++ + E
Sbjct: 357 ENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDE 409
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 54/98 (55%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD LGL DY II+ PMD+GT+K RL N+Y + E +D
Sbjct: 39 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDF 98
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
F N YN D+ +MA+ L KIF K + E
Sbjct: 99 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQE 136
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 49/77 (63%), Gaps = 4/77 (5%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLF-QHDDEIEVDIDSVDAETLWEL 608
R M+YDEK++LS ++ LP EKL +V II+ R SL + +EIE+D +++ TL EL
Sbjct: 592 RPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREPSLRDSNPEEIEIDFETLKPSTLREL 651
Query: 609 DRFVTNYKKSLSKNKRK 625
+R+V + L K RK
Sbjct: 652 ERYVLS---CLRKKPRK 665
>gi|18308127|gb|AAL67834.1|AF461396_1 bromodomain-containing protein BRD4 short variant [Mus musculus]
Length = 723
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 76/137 (55%), Gaps = 6/137 (4%)
Query: 342 PAESNKKSKLNGKKQAGNELAHGFGTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVK 398
P + KK + ++ G E + S+ K CS +L+++ KH W F PVDV+
Sbjct: 328 PVKPPKKDVPDSQQHPGPEKSSKI---SEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVE 384
Query: 399 NLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMA 458
LGLHDY II+HPMD+ T+K++L Y+ +EF DVRL F N YNP +V MA
Sbjct: 385 ALGLHDYCDIIKHPMDMSTIKSKLESREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMA 444
Query: 459 EQLLKIFEDKWVVIESE 475
+L +FE ++ + E
Sbjct: 445 RKLQDVFEMRFAKMPDE 461
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 60/108 (55%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
+L+ L KH+ W F PVD L L DY+ II+ PMD+GT+K RL N+Y + +E +D
Sbjct: 69 VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQD 128
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGA 484
F N YN G D+ +MAE L K+F K + +E M + A
Sbjct: 129 FNTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEETEIMIVQA 176
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 51/79 (64%), Gaps = 5/79 (6%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLF-QHDDEIEVDIDSVDAETLWEL 608
+ M+Y+EK++LS ++ LP EKL +V II+ R SL + DEIE+D +++ TL EL
Sbjct: 609 KPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLREL 668
Query: 609 DRFVTNYKKSLSKNKRKAE 627
+R+VT S + KRK +
Sbjct: 669 ERYVT----SCLRKKRKPQ 683
>gi|410958884|ref|XP_003986043.1| PREDICTED: bromodomain-containing protein 2 isoform 1 [Felis catus]
gi|410958886|ref|XP_003986044.1| PREDICTED: bromodomain-containing protein 2 isoform 2 [Felis catus]
Length = 804
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 66/113 (58%), Gaps = 3/113 (2%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G S+ K C+ +L++L+ KH W F PVD LGLHDY II+HPMDL TVK ++
Sbjct: 344 GKLSEQLKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKM 403
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
Y+ +EFA DVRL F N YNP DV MA +L +FE ++ + E
Sbjct: 404 ENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDE 456
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 54/98 (55%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD LGL DY II+ PMD+GT+K RL N+Y + E +D
Sbjct: 86 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDF 145
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
F N YN D+ +MA+ L KIF K + E
Sbjct: 146 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQE 183
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 49/77 (63%), Gaps = 4/77 (5%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLF-QHDDEIEVDIDSVDAETLWEL 608
R M+YDEK++LS ++ LP EKL +V II+ R SL + +EIE+D +++ TL EL
Sbjct: 642 RPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREPSLRDSNPEEIEIDFETLKPSTLREL 701
Query: 609 DRFVTNYKKSLSKNKRK 625
+R+V + L K RK
Sbjct: 702 ERYVLS---CLRKKPRK 715
>gi|410950660|ref|XP_003982021.1| PREDICTED: bromodomain-containing protein 4 [Felis catus]
Length = 720
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 74/135 (54%), Gaps = 5/135 (3%)
Query: 369 SKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN 425
S+ K CS +L+++ KH W F PVDV+ LGLHDY II+HPMD+ T+K++L
Sbjct: 351 SEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAR 410
Query: 426 WYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGAD 485
Y+ +EF DVRL F N YNP +V MA +L +FE ++ + E E + A
Sbjct: 411 EYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE--PEEPVVAV 468
Query: 486 YEMGFHTPTSRKAPP 500
PT APP
Sbjct: 469 SSPAVPPPTKVAAPP 483
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 60/108 (55%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
+L+ L KH+ W F PVD L L DY+ II+ PMD+GT+K RL N+Y + +E +D
Sbjct: 69 VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQD 128
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGA 484
F N YN G D+ +MAE L K+F K + +E M + A
Sbjct: 129 FNTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEETEIMIVQA 176
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 51/79 (64%), Gaps = 5/79 (6%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLF-QHDDEIEVDIDSVDAETLWEL 608
+ M+Y+EK++LS ++ LP EKL +V II+ R SL + DEIE+D +++ TL EL
Sbjct: 608 KPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLREL 667
Query: 609 DRFVTNYKKSLSKNKRKAE 627
+R+VT S + KRK +
Sbjct: 668 ERYVT----SCLRKKRKPQ 682
>gi|355561582|gb|EHH18214.1| hypothetical protein EGK_14770 [Macaca mulatta]
Length = 862
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 66/113 (58%), Gaps = 3/113 (2%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G S+ K C+ +L++L+ KH W F PVD LGLHDY II+HPMDL TVK ++
Sbjct: 404 GKLSEQLKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKM 463
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
Y+ +EFA DVRL F N YNP DV MA +L +FE ++ + E
Sbjct: 464 ENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDE 516
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 54/98 (55%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD LGL DY II+ PMD+GT+K RL ++ + E ED+
Sbjct: 146 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENSYCWAASECMEDL 205
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
F N YN D+ +MA+ L KIF K + E
Sbjct: 206 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQE 243
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 49/77 (63%), Gaps = 4/77 (5%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLF-QHDDEIEVDIDSVDAETLWEL 608
R M+YDEK++LS ++ LP EKL +V II+ R SL + +EIE+D +++ TL EL
Sbjct: 701 RPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREPSLRDSNPEEIEIDFETLKPSTLREL 760
Query: 609 DRFVTNYKKSLSKNKRK 625
+R+V + L K RK
Sbjct: 761 ERYVLS---CLRKKPRK 774
>gi|148708381|gb|EDL40328.1| bromodomain containing 4, isoform CRA_c [Mus musculus]
Length = 734
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 76/137 (55%), Gaps = 6/137 (4%)
Query: 342 PAESNKKSKLNGKKQAGNELAHGFGTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVK 398
P + KK + ++ G E + S+ K CS +L+++ KH W F PVDV+
Sbjct: 339 PVKPPKKDVPDSQQHPGPEKSSKI---SEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVE 395
Query: 399 NLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMA 458
LGLHDY II+HPMD+ T+K++L Y+ +EF DVRL F N YNP +V MA
Sbjct: 396 ALGLHDYCDIIKHPMDMSTIKSKLESREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMA 455
Query: 459 EQLLKIFEDKWVVIESE 475
+L +FE ++ + E
Sbjct: 456 RKLQDVFEMRFAKMPDE 472
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 60/108 (55%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
+L+ L KH+ W F PVD L L DY+ II+ PMD+GT+K RL N+Y + +E +D
Sbjct: 80 VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQD 139
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGA 484
F N YN G D+ +MAE L K+F K + +E M + A
Sbjct: 140 FNTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEETEIMIVQA 187
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 51/79 (64%), Gaps = 5/79 (6%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLF-QHDDEIEVDIDSVDAETLWEL 608
+ M+Y+EK++LS ++ LP EKL +V II+ R SL + DEIE+D +++ TL EL
Sbjct: 620 KPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLREL 679
Query: 609 DRFVTNYKKSLSKNKRKAE 627
+R+VT S + KRK +
Sbjct: 680 ERYVT----SCLRKKRKPQ 694
>gi|2995269|emb|CAA15818.1| MMRING3.1.1 [Mus musculus]
gi|62945214|dbj|BAD97682.1| bromodomain-containing Brd2 protein [Mus musculus]
Length = 752
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 66/113 (58%), Gaps = 3/113 (2%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G S+ K C+ +L++L+ KH W F PVD LGLHDY II+HPMDL TVK ++
Sbjct: 297 GKLSEQLKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKM 356
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
Y+ +EFA DVRL F N YNP DV MA +L +FE ++ + E
Sbjct: 357 ENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDE 409
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 54/98 (55%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD LGL DY II+ PMD+GT+K RL N+Y + E +D
Sbjct: 39 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDF 98
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
F N YN D+ +MA+ L KIF K + E
Sbjct: 99 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQE 136
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 49/77 (63%), Gaps = 4/77 (5%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLF-QHDDEIEVDIDSVDAETLWEL 608
R M+YDEK++LS ++ LP EKL +V II+ R SL + +EIE+D +++ TL EL
Sbjct: 592 RPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREPSLRDSNPEEIEIDFETLKPSTLREL 651
Query: 609 DRFVTNYKKSLSKNKRK 625
+R+V + L K RK
Sbjct: 652 ERYVLS---CLRKKPRK 665
>gi|426250128|ref|XP_004018790.1| PREDICTED: bromodomain-containing protein 2 [Ovis aries]
Length = 803
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 66/113 (58%), Gaps = 3/113 (2%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G S+ K C+ +L++L+ KH W F PVD LGLHDY II+HPMDL TVK ++
Sbjct: 344 GKLSEQLKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKM 403
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
Y+ +EFA DVRL F N YNP DV MA +L +FE ++ + E
Sbjct: 404 ENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDE 456
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 54/98 (55%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD LGL DY II+ PMD+GT+K RL N+Y + E +D
Sbjct: 86 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDF 145
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
F N YN D+ +MA+ L KIF K + E
Sbjct: 146 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQE 183
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 49/77 (63%), Gaps = 4/77 (5%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLF-QHDDEIEVDIDSVDAETLWEL 608
R M+YDEK++LS ++ LP EKL +V II+ R SL + +EIE+D +++ TL EL
Sbjct: 642 RPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREPSLRDSNPEEIEIDFETLKPSTLREL 701
Query: 609 DRFVTNYKKSLSKNKRK 625
+R+V + L K RK
Sbjct: 702 ERYVLS---CLRKKPRK 715
>gi|109070687|ref|XP_001115845.1| PREDICTED: hypothetical protein LOC717893 isoform 7 [Macaca
mulatta]
gi|109070689|ref|XP_001115854.1| PREDICTED: hypothetical protein LOC717893 isoform 8 [Macaca
mulatta]
Length = 802
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 66/113 (58%), Gaps = 3/113 (2%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G S+ K C+ +L++L+ KH W F PVD LGLHDY II+HPMDL TVK ++
Sbjct: 344 GKLSEQLKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKM 403
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
Y+ +EFA DVRL F N YNP DV MA +L +FE ++ + E
Sbjct: 404 ENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDE 456
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 54/98 (55%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD LGL DY II+ PMD+GT+K RL N+Y + E +D
Sbjct: 86 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDF 145
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
F N YN D+ +MA+ L KIF K + E
Sbjct: 146 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQE 183
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 49/77 (63%), Gaps = 4/77 (5%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLF-QHDDEIEVDIDSVDAETLWEL 608
R M+YDEK++LS ++ LP EKL +V II+ R SL + +EIE+D +++ TL EL
Sbjct: 641 RPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREPSLRDSNPEEIEIDFETLKPSTLREL 700
Query: 609 DRFVTNYKKSLSKNKRK 625
+R+V + L K RK
Sbjct: 701 ERYVLS---CLRKKPRK 714
>gi|397474356|ref|XP_003808648.1| PREDICTED: LOW QUALITY PROTEIN: bromodomain-containing protein 2
[Pan paniscus]
Length = 800
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 66/113 (58%), Gaps = 3/113 (2%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G S+ K C+ +L++L+ KH W F PVD LGLHDY II+HPMDL TVK ++
Sbjct: 344 GKLSEQLKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKM 403
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
Y+ +EFA DVRL F N YNP DV MA +L +FE ++ + E
Sbjct: 404 ENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDE 456
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 54/98 (55%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD LGL DY II+ PMD+GT+K RL N+Y + E +D
Sbjct: 86 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDF 145
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
F N YN D+ +MA+ L KIF K + E
Sbjct: 146 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQE 183
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 49/77 (63%), Gaps = 4/77 (5%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLF-QHDDEIEVDIDSVDAETLWEL 608
R M+YDEK++LS ++ LP EKL +V II+ R SL + +EIE+D +++ TL EL
Sbjct: 639 RPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREPSLRDSNPEEIEIDFETLKPSTLREL 698
Query: 609 DRFVTNYKKSLSKNKRK 625
+R+V + L K RK
Sbjct: 699 ERYVLS---CLRKKPRK 712
>gi|114606772|ref|XP_001168005.1| PREDICTED: bromodomain-containing protein 2 isoform 10 [Pan
troglodytes]
gi|114606774|ref|XP_001168036.1| PREDICTED: bromodomain-containing protein 2 isoform 11 [Pan
troglodytes]
gi|410213772|gb|JAA04105.1| bromodomain containing 2 [Pan troglodytes]
gi|410213774|gb|JAA04106.1| bromodomain containing 2 [Pan troglodytes]
gi|410267650|gb|JAA21791.1| bromodomain containing 2 [Pan troglodytes]
gi|410267652|gb|JAA21792.1| bromodomain containing 2 [Pan troglodytes]
gi|410303978|gb|JAA30589.1| bromodomain containing 2 [Pan troglodytes]
gi|410303980|gb|JAA30590.1| bromodomain containing 2 [Pan troglodytes]
gi|410354717|gb|JAA43962.1| bromodomain containing 2 [Pan troglodytes]
gi|410354719|gb|JAA43963.1| bromodomain containing 2 [Pan troglodytes]
Length = 800
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 66/113 (58%), Gaps = 3/113 (2%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G S+ K C+ +L++L+ KH W F PVD LGLHDY II+HPMDL TVK ++
Sbjct: 344 GKLSEQLKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKM 403
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
Y+ +EFA DVRL F N YNP DV MA +L +FE ++ + E
Sbjct: 404 ENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDE 456
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 54/98 (55%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD LGL DY II+ PMD+GT+K RL N+Y + E +D
Sbjct: 86 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDF 145
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
F N YN D+ +MA+ L KIF K + E
Sbjct: 146 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQE 183
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 49/77 (63%), Gaps = 4/77 (5%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLF-QHDDEIEVDIDSVDAETLWEL 608
R M+YDEK++LS ++ LP EKL +V II+ R SL + +EIE+D +++ TL EL
Sbjct: 639 RPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREPSLRDSNPEEIEIDFETLKPSTLREL 698
Query: 609 DRFVTNYKKSLSKNKRK 625
+R+V + L K RK
Sbjct: 699 ERYVLS---CLRKKPRK 712
>gi|114326383|ref|NP_001041552.1| bromodomain-containing protein 2 [Canis lupus familiaris]
gi|62899715|sp|Q5TJG6.1|BRD2_CANFA RecName: Full=Bromodomain-containing protein 2
gi|55956582|emb|CAI11405.1| bromodomain-containing protein 2 [Canis lupus familiaris]
Length = 803
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 66/113 (58%), Gaps = 3/113 (2%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G S+ K C+ +L++L+ KH W F PVD LGLHDY II+HPMDL TVK ++
Sbjct: 344 GKLSEQLKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKM 403
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
Y+ +EFA DVRL F N YNP DV MA +L +FE ++ + E
Sbjct: 404 ENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDE 456
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 54/98 (55%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD LGL DY II+ PMD+GT+K RL N+Y + E +D
Sbjct: 86 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDF 145
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
F N YN D+ +MA+ L KIF K + E
Sbjct: 146 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQE 183
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 49/77 (63%), Gaps = 4/77 (5%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLF-QHDDEIEVDIDSVDAETLWEL 608
R M+YDEK++LS ++ LP EKL +V II+ R SL + +EIE+D +++ TL EL
Sbjct: 642 RPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREPSLRDSNPEEIEIDFETLKPSTLREL 701
Query: 609 DRFVTNYKKSLSKNKRK 625
+R+V + L K RK
Sbjct: 702 ERYVLS---CLRKKPRK 715
>gi|344283171|ref|XP_003413346.1| PREDICTED: bromodomain-containing protein 4-like [Loxodonta
africana]
Length = 965
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 47/110 (42%), Positives = 66/110 (60%), Gaps = 3/110 (2%)
Query: 369 SKIFKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN 425
S+ K CS +L+++ KH W F PVDV+ LGLHDY II+HPMD+ T+K++L
Sbjct: 351 SEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAR 410
Query: 426 WYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
Y+ +EF DVRL F N YNP +V MA +L +FE ++ + E
Sbjct: 411 EYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE 460
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 54/91 (59%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+L+ L +H+ W F PVD L L DY+ II+ PMD+GT+K RL N+Y + +E +D
Sbjct: 70 VLKTLWRHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN G D+ +MAE L K+F K
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 51/79 (64%), Gaps = 5/79 (6%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLF-QHDDEIEVDIDSVDAETLWEL 608
+ M+Y+EK++LS ++ LP EKL +V II+ R SL + DEIE+D +++ TL EL
Sbjct: 608 KPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLREL 667
Query: 609 DRFVTNYKKSLSKNKRKAE 627
+R+VT S + KRK +
Sbjct: 668 ERYVT----SCLRKKRKPQ 682
>gi|297661251|ref|XP_002809176.1| PREDICTED: bromodomain-containing protein 2 isoform 3 [Pongo
abelii]
Length = 754
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 66/113 (58%), Gaps = 3/113 (2%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G S+ K C+ +L++L+ KH W F PVD LGLHDY II+HPMDL TVK ++
Sbjct: 297 GKLSEQLKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKM 356
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
Y+ +EFA DVRL F N YNP DV MA +L +FE ++ + E
Sbjct: 357 ENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDE 409
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 54/98 (55%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD LGL DY II+ PMD+GT+K RL N+Y + E +D
Sbjct: 39 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDF 98
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
F N YN D+ +MA+ L KIF K + E
Sbjct: 99 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQE 136
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 49/77 (63%), Gaps = 4/77 (5%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLF-QHDDEIEVDIDSVDAETLWEL 608
R M+YDEK++LS ++ LP EKL +V II+ R SL + +EIE+D +++ TL EL
Sbjct: 593 RPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREPSLRDSNPEEIEIDFETLKPSTLREL 652
Query: 609 DRFVTNYKKSLSKNKRK 625
+R+V + L K RK
Sbjct: 653 ERYVLS---CLRKKPRK 666
>gi|166851651|gb|ABY91321.1| RING3 [Sus scrofa]
Length = 756
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 66/113 (58%), Gaps = 3/113 (2%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G S+ K C+ +L++L+ KH W F PVD LGLHDY II+HPMDL TVK ++
Sbjct: 297 GKLSEQLKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKM 356
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
Y+ +EFA DVRL F N YNP DV MA +L +FE ++ + E
Sbjct: 357 ENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDE 409
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 54/98 (55%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD LGL DY II+ PMD+GT+K RL N+Y + E +D
Sbjct: 39 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDF 98
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
F N YN D+ +MA+ L KIF K + E
Sbjct: 99 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQE 136
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 49/77 (63%), Gaps = 4/77 (5%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLF-QHDDEIEVDIDSVDAETLWEL 608
R M+YDEK++LS ++ LP EKL +V II+ R SL + +EIE+D +++ TL EL
Sbjct: 595 RPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREPSLRDSNPEEIEIDFETLKPSTLREL 654
Query: 609 DRFVTNYKKSLSKNKRK 625
+R+V + L K RK
Sbjct: 655 ERYVLS---CLRKKPRK 668
>gi|301757117|ref|XP_002914388.1| PREDICTED: bromodomain-containing protein 2-like [Ailuropoda
melanoleuca]
Length = 803
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 66/113 (58%), Gaps = 3/113 (2%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G S+ K C+ +L++L+ KH W F PVD LGLHDY II+HPMDL TVK ++
Sbjct: 344 GKLSEQLKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKM 403
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
Y+ +EFA DVRL F N YNP DV MA +L +FE ++ + E
Sbjct: 404 ENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDE 456
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 54/98 (55%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD LGL DY II+ PMD+GT+K RL N+Y + E +D
Sbjct: 86 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDF 145
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
F N YN D+ +MA+ L KIF K + E
Sbjct: 146 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQE 183
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 49/77 (63%), Gaps = 4/77 (5%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLF-QHDDEIEVDIDSVDAETLWEL 608
R M+YDEK++LS ++ LP EKL +V II+ R SL + +EIE+D +++ TL EL
Sbjct: 642 RPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREPSLRDSNPEEIEIDFETLKPSTLREL 701
Query: 609 DRFVTNYKKSLSKNKRK 625
+R+V + L K RK
Sbjct: 702 ERYVLS---CLRKKPRK 715
>gi|297661247|ref|XP_002809174.1| PREDICTED: bromodomain-containing protein 2 isoform 1 [Pongo
abelii]
gi|297661249|ref|XP_002809175.1| PREDICTED: bromodomain-containing protein 2 isoform 2 [Pongo
abelii]
Length = 801
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 66/113 (58%), Gaps = 3/113 (2%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G S+ K C+ +L++L+ KH W F PVD LGLHDY II+HPMDL TVK ++
Sbjct: 344 GKLSEQLKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKM 403
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
Y+ +EFA DVRL F N YNP DV MA +L +FE ++ + E
Sbjct: 404 ENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDE 456
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 54/98 (55%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD LGL DY II+ PMD+GT+K RL N+Y + E +D
Sbjct: 86 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDF 145
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
F N YN D+ +MA+ L KIF K + E
Sbjct: 146 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQE 183
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 49/77 (63%), Gaps = 4/77 (5%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLF-QHDDEIEVDIDSVDAETLWEL 608
R M+YDEK++LS ++ LP EKL +V II+ R SL + +EIE+D +++ TL EL
Sbjct: 640 RPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREPSLRDSNPEEIEIDFETLKPSTLREL 699
Query: 609 DRFVTNYKKSLSKNKRK 625
+R+V + L K RK
Sbjct: 700 ERYVLS---CLRKKPRK 713
>gi|170036200|ref|XP_001845953.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167878751|gb|EDS42134.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 848
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 52/110 (47%), Positives = 64/110 (58%), Gaps = 3/110 (2%)
Query: 369 SKIFKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN 425
S KSC+ +L++L KH W F PVD + LGLHDY II+ PMDLGTVK +++
Sbjct: 407 SDALKSCNEILKELFSKKHSGYAWPFYKPVDAELLGLHDYHDIIKKPMDLGTVKRKMDNR 466
Query: 426 WYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
YKS EFA DVRL F N YNP DV M +L +FE + I E
Sbjct: 467 EYKSANEFAADVRLIFTNCYKYNPPDHDVVAMGRKLQDVFEMRLANIPDE 516
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/124 (41%), Positives = 69/124 (55%), Gaps = 2/124 (1%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ + KH+ W F PVD K L L DY II+ PMDLGTVK RL N+Y + KE +D
Sbjct: 68 VMKAVWKHQFSWPFQQPVDAKKLNLPDYHKIIKQPMDLGTVKKRLENNYYWTSKEAIQDF 127
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEMGFHTPTSRK 497
+ F N YN G+DV +MA+ L K+F K V + + EM + TPT R
Sbjct: 128 NIMFSNCYVYNKPGEDVVVMAQTLEKLFLTK-VSLMPKDEVEMDVPNPKGAKKKTPTVRS 186
Query: 498 -APP 500
APP
Sbjct: 187 LAPP 190
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWEL 608
+ M+YDEK++LS ++ LP +KL +V II+ R SL + DEIE+D +++ TL EL
Sbjct: 701 KPMSYDEKRQLSLDINKLPGDKLGRVVHIIQSREPSLRDSNPDEIEIDFETLKPSTLREL 760
Query: 609 DRFV 612
+ +V
Sbjct: 761 ESYV 764
>gi|1370115|emb|CAA65450.1| kinase [Homo sapiens]
Length = 754
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 66/113 (58%), Gaps = 3/113 (2%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G S+ K C+ +L++L+ KH W F PVD LGLHDY II+HPMDL TVK ++
Sbjct: 297 GKLSEQLKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKM 356
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
Y+ +EFA DVRL F N YNP DV MA +L +FE ++ + E
Sbjct: 357 ENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDE 409
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 54/98 (55%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD LGL DY II+ PMD+GT+K RL N+Y + E +D
Sbjct: 39 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDF 98
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
F N YN D+ +MA+ L KIF K + E
Sbjct: 99 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQE 136
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 49/77 (63%), Gaps = 4/77 (5%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLF-QHDDEIEVDIDSVDAETLWEL 608
R M+YDEK++LS ++ LP EKL +V II+ R SL + +EIE+D +++ TL EL
Sbjct: 593 RPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREPSLRDSNPEEIEIDFETLKPSTLREL 652
Query: 609 DRFVTNYKKSLSKNKRK 625
+R+V + L K RK
Sbjct: 653 ERYVLS---CLRKKPRK 666
>gi|426230380|ref|XP_004009251.1| PREDICTED: bromodomain-containing protein 4 [Ovis aries]
Length = 1225
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 47/110 (42%), Positives = 66/110 (60%), Gaps = 3/110 (2%)
Query: 369 SKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN 425
S+ K CS +L+++ KH W F PVDV+ LGLHDY II+HPMD+ T+K++L
Sbjct: 349 SEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAR 408
Query: 426 WYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
Y+ +EF DVRL F N YNP +V MA +L +FE ++ + E
Sbjct: 409 EYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE 458
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 54/91 (59%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+L+ L KH+ W F PVD L L DY+ II+ PMD+GT+K RL N+Y + +E +D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN G D+ +MAE L K+F K
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 51/79 (64%), Gaps = 5/79 (6%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLF-QHDDEIEVDIDSVDAETLWEL 608
+ M+Y+EK++LS ++ LP EKL +V II+ R SL + DEIE+D +++ TL EL
Sbjct: 606 KPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLREL 665
Query: 609 DRFVTNYKKSLSKNKRKAE 627
+R+VT S + KRK +
Sbjct: 666 ERYVT----SCLRKKRKPQ 680
>gi|380815348|gb|AFE79548.1| bromodomain-containing protein 2 isoform 1 [Macaca mulatta]
gi|380815350|gb|AFE79549.1| bromodomain-containing protein 2 isoform 1 [Macaca mulatta]
gi|383420527|gb|AFH33477.1| bromodomain-containing protein 2 isoform 1 [Macaca mulatta]
gi|383420529|gb|AFH33478.1| bromodomain-containing protein 2 isoform 1 [Macaca mulatta]
gi|384948624|gb|AFI37917.1| bromodomain-containing protein 2 isoform 1 [Macaca mulatta]
gi|384948626|gb|AFI37918.1| bromodomain-containing protein 2 isoform 1 [Macaca mulatta]
Length = 802
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 66/113 (58%), Gaps = 3/113 (2%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G S+ K C+ +L++L+ KH W F PVD LGLHDY II+HPMDL TVK ++
Sbjct: 344 GKLSEQLKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKM 403
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
Y+ +EFA DVRL F N YNP DV MA +L +FE ++ + E
Sbjct: 404 ENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDE 456
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 54/98 (55%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD LGL DY II+ PMD+GT+K RL N+Y + E +D
Sbjct: 86 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDF 145
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
F N YN D+ +MA+ L KIF K + E
Sbjct: 146 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQE 183
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 49/77 (63%), Gaps = 4/77 (5%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLF-QHDDEIEVDIDSVDAETLWEL 608
R M+YDEK++LS ++ LP EKL +V II+ R SL + +EIE+D +++ TL EL
Sbjct: 641 RPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREPSLRDSNPEEIEIDFETLKPSTLREL 700
Query: 609 DRFVTNYKKSLSKNKRK 625
+R+V + L K RK
Sbjct: 701 ERYVLS---CLRKKPRK 714
>gi|396080308|ref|NP_571275.2| bromodomain-containing protein 2 isoform 1 [Danio rerio]
gi|157280793|gb|ABV29329.1| bromodomain-containing protein 2a [Danio rerio]
Length = 836
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 48/113 (42%), Positives = 68/113 (60%), Gaps = 3/113 (2%)
Query: 366 GTGSKIFKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G S+ + CS +L++L+ KH W F PVDV +LGLHDY+ II +PMDL T+K ++
Sbjct: 378 GKLSQQLRYCSTILKELLSKKHTAYAWPFYKPVDVSSLGLHDYYDIIMYPMDLSTIKRKM 437
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
+ Y+ +FA DVRL F N YNP DV MA +L +FE ++ + E
Sbjct: 438 DHREYRDALQFAADVRLMFSNCYKYNPPDHDVVAMARRLQDVFEFRFAKMPDE 490
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 53/92 (57%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
AL++ L +H W F+ PVD L L DY+ II+ PMD+GT+K RL N+Y+S E +D
Sbjct: 83 ALVKTLWRHHFAWPFHEPVDAAKLNLPDYYNIIKQPMDMGTIKKRLENNYYRSASECMQD 142
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN D+ +MA+ L K F K
Sbjct: 143 FNTMFTNCYIYNKPTDDIVLMAQSLEKAFLQK 174
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 51/84 (60%), Gaps = 4/84 (4%)
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQ-HDDEIEVDIDSVDAETLWELDR 610
M+YDEK++LS ++ LP EKL +V II+ R SL + +EIE+D +++ TL EL+R
Sbjct: 677 MSYDEKRQLSLDINRLPGEKLGRVVHIIQSREPSLRDTNPEEIEIDFETLKPSTLRELER 736
Query: 611 FVTNYKKSLSKNKRKAELANQARA 634
+V L K RK +A + A
Sbjct: 737 YVM---MCLRKKPRKPFVAIKGSA 757
>gi|157280791|gb|ABV29328.1| bromodomain-containing protein 2a [Danio rerio]
Length = 838
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 48/113 (42%), Positives = 68/113 (60%), Gaps = 3/113 (2%)
Query: 366 GTGSKIFKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G S+ + CS +L++L+ KH W F PVDV +LGLHDY+ II +PMDL T+K ++
Sbjct: 380 GKLSQQLRYCSTILKELLSKKHTAYAWPFYKPVDVSSLGLHDYYDIIMYPMDLSTIKRKM 439
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
+ Y+ +FA DVRL F N YNP DV MA +L +FE ++ + E
Sbjct: 440 DHREYRDALQFAADVRLMFSNCYKYNPPDHDVVAMARRLQDVFEFRFAKMPDE 492
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 53/92 (57%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
AL++ L +H W F+ PVD L L DY+ II+ PMD+GT+K RL N+Y+S E +D
Sbjct: 83 ALVKTLWRHHFAWPFHEPVDAAKLNLPDYYNIIKQPMDMGTIKKRLENNYYRSASECMQD 142
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN D+ +MA+ L K F K
Sbjct: 143 FNTMFTNCYIYNKPTDDIVLMAQSLEKAFLQK 174
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 51/84 (60%), Gaps = 4/84 (4%)
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQ-HDDEIEVDIDSVDAETLWELDR 610
M+YDEK++LS ++ LP EKL +V II+ R SL + +EIE+D +++ TL EL+R
Sbjct: 679 MSYDEKRQLSLDINRLPGEKLGRVVHIIQSREPSLRDTNPEEIEIDFETLKPSTLRELER 738
Query: 611 FVTNYKKSLSKNKRKAELANQARA 634
+V L K RK +A + A
Sbjct: 739 YVM---MCLRKKPRKPFVAIKGSA 759
>gi|351711490|gb|EHB14409.1| Bromodomain-containing protein 4 [Heterocephalus glaber]
Length = 1225
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 47/110 (42%), Positives = 66/110 (60%), Gaps = 3/110 (2%)
Query: 369 SKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN 425
S+ K CS +L+++ KH W F PVDV+ LGLHDY II+HPMD+ T+K++L
Sbjct: 362 SEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLESR 421
Query: 426 WYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
Y+ +EF DVRL F N YNP +V MA +L +FE ++ + E
Sbjct: 422 EYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE 471
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 60/107 (56%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+L+ L KH+ W F PVD L L DY+ II+ PMD+GT+K RL N+Y + +E +D
Sbjct: 104 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 163
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGA 484
F N YN G D+ +MAE L K+F K + +E M + A
Sbjct: 164 NTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEETEIMIVQA 210
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 51/79 (64%), Gaps = 5/79 (6%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLF-QHDDEIEVDIDSVDAETLWEL 608
+ M+Y+EK++LS ++ LP EKL +V II+ R SL + DEIE+D +++ TL EL
Sbjct: 618 KPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLREL 677
Query: 609 DRFVTNYKKSLSKNKRKAE 627
+R+VT S + KRK +
Sbjct: 678 ERYVT----SCLRKKRKPQ 692
>gi|24210305|emb|CAD54663.1| bromodomain containing 2 [Danio rerio]
Length = 806
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 48/113 (42%), Positives = 68/113 (60%), Gaps = 3/113 (2%)
Query: 366 GTGSKIFKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G S+ + CS +L++L+ KH W F PVDV +LGLHDY+ II +PMDL T+K ++
Sbjct: 369 GKLSQQLRYCSTILKELLSKKHTAYAWPFYKPVDVSSLGLHDYYDIIMYPMDLSTIKRKM 428
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
+ Y+ +FA DVRL F N YNP DV MA +L +FE ++ + E
Sbjct: 429 DHREYRDALQFAADVRLMFSNCYKYNPPDHDVVAMARRLQDVFEFRFAKMPDE 481
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 53/92 (57%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
AL++ L +H W F+ PVD L L DY+ II+ PMD+GT+K RL N+Y+S E +D
Sbjct: 72 ALVKTLWRHHFAWPFHEPVDAAKLNLPDYYNIIKQPMDMGTIKKRLENNYYRSASECMQD 131
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN D+ +MA+ L K F K
Sbjct: 132 FNTMFTNCYIYNKPTDDIVLMAQSLEKAFLQK 163
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 51/84 (60%), Gaps = 4/84 (4%)
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQ-HDDEIEVDIDSVDAETLWELDR 610
M+YDEK++LS ++ LP EKL +V II+ R SL + +EIE+D +++ TL EL+R
Sbjct: 647 MSYDEKRQLSLDINRLPGEKLGRVVHIIQSREPSLRDTNPEEIEIDFETLKPSTLRELER 706
Query: 611 FVTNYKKSLSKNKRKAELANQARA 634
+V L K RK +A + A
Sbjct: 707 YVMM---CLRKKPRKPFVAIKGSA 727
>gi|396080310|ref|NP_001257500.1| bromodomain-containing protein 2 isoform 2 [Danio rerio]
gi|94732369|emb|CAK04960.1| bromodomain-containing 2 [Danio rerio]
gi|190337777|gb|AAI63905.1| Bromodomain-containing 2a [Danio rerio]
gi|190339055|gb|AAI63902.1| Bromodomain-containing 2a [Danio rerio]
Length = 832
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 48/113 (42%), Positives = 68/113 (60%), Gaps = 3/113 (2%)
Query: 366 GTGSKIFKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G S+ + CS +L++L+ KH W F PVDV +LGLHDY+ II +PMDL T+K ++
Sbjct: 378 GKLSQQLRYCSTILKELLSKKHTAYAWPFYKPVDVSSLGLHDYYDIIMYPMDLSTIKRKM 437
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
+ Y+ +FA DVRL F N YNP DV MA +L +FE ++ + E
Sbjct: 438 DHREYRDALQFAADVRLMFSNCYKYNPPDHDVVAMARRLQDVFEFRFAKMPDE 490
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 53/92 (57%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
AL++ L +H W F+ PVD L L DY+ II+ PMD+GT+K RL N+Y+S E +D
Sbjct: 83 ALVKTLWRHHFAWPFHEPVDAAKLNLPDYYNIIKQPMDMGTIKKRLENNYYRSASECMQD 142
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN D+ +MA+ L K F K
Sbjct: 143 FNTMFTNCYIYNKPTDDIVLMAQSLEKAFLQK 174
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 51/84 (60%), Gaps = 4/84 (4%)
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQ-HDDEIEVDIDSVDAETLWELDR 610
M+YDEK++LS ++ LP EKL +V II+ R SL + +EIE+D +++ TL EL+R
Sbjct: 673 MSYDEKRQLSLDINRLPGEKLGRVVHIIQSREPSLRDTNPEEIEIDFETLKPSTLRELER 732
Query: 611 FVTNYKKSLSKNKRKAELANQARA 634
+V L K RK +A + A
Sbjct: 733 YVM---MCLRKKPRKPFVAIKGSA 753
>gi|15706263|emb|CAC69989.1| bromodomain containing 2 [Homo sapiens]
Length = 801
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 66/113 (58%), Gaps = 3/113 (2%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G S+ K C+ +L++L+ KH W F PVD LGLHDY II+HPMDL TVK ++
Sbjct: 344 GKLSEQLKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKM 403
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
Y+ +EFA DVRL F N YNP DV MA +L +FE ++ + E
Sbjct: 404 ENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDE 456
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 54/98 (55%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD LGL DY II+ PMD+GT+K RL N+Y + E +D
Sbjct: 86 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDF 145
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
F N YN D+ +MA+ L KIF K + E
Sbjct: 146 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQE 183
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 49/77 (63%), Gaps = 4/77 (5%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLF-QHDDEIEVDIDSVDAETLWEL 608
R M+YDEK++LS ++ LP EKL +V II+ R SL + +EIE+D +++ TL EL
Sbjct: 640 RPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREPSLRDSNPEEIEIDFETLKPSTLREL 699
Query: 609 DRFVTNYKKSLSKNKRK 625
+R+V + L K RK
Sbjct: 700 ERYVLS---CLRKKPRK 713
>gi|178057339|ref|NP_001116557.1| bromodomain-containing protein 2 [Sus scrofa]
gi|147223324|emb|CAN13285.1| bromodomain containing 2 [Sus scrofa]
Length = 803
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 66/113 (58%), Gaps = 3/113 (2%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G S+ K C+ +L++L+ KH W F PVD LGLHDY II+HPMDL TVK ++
Sbjct: 344 GKLSEQLKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKM 403
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
Y+ +EFA DVRL F N YNP DV MA +L +FE ++ + E
Sbjct: 404 ENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDE 456
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 54/98 (55%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD LGL DY II+ PMD+GT+K RL N+Y + E +D
Sbjct: 86 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDF 145
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
F N YN D+ +MA+ L KIF K + E
Sbjct: 146 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQE 183
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 49/77 (63%), Gaps = 4/77 (5%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLF-QHDDEIEVDIDSVDAETLWEL 608
R M+YDEK++LS ++ LP EKL +V II+ R SL + +EIE+D +++ TL EL
Sbjct: 642 RPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREPSLRDSNPEEIEIDFETLKPSTLREL 701
Query: 609 DRFVTNYKKSLSKNKRK 625
+R+V + L K RK
Sbjct: 702 ERYVLS---CLRKKPRK 715
>gi|71067345|ref|NP_034368.2| bromodomain-containing protein 2 [Mus musculus]
gi|326368244|ref|NP_001191902.1| bromodomain-containing protein 2 [Mus musculus]
gi|81894326|sp|Q7JJ13.1|BRD2_MOUSE RecName: Full=Bromodomain-containing protein 2; AltName:
Full=Female sterile homeotic-related protein 1; AltName:
Full=Fsrg-1; AltName: Full=Protein RING3
gi|2995270|emb|CAA15819.1| MMRING3.1.2 [Mus musculus]
gi|3041763|dbj|BAA25416.1| Ring3 [Mus musculus]
gi|3811391|gb|AAC69907.1| RING3 [Mus musculus]
gi|74186521|dbj|BAE34749.1| unnamed protein product [Mus musculus]
gi|74214328|dbj|BAE40404.1| unnamed protein product [Mus musculus]
gi|123233747|emb|CAM17898.1| bromodomain containing 2 [Mus musculus]
gi|148678305|gb|EDL10252.1| bromodomain containing 2 [Mus musculus]
gi|187954015|gb|AAI38657.1| Bromodomain containing 2 [Mus musculus]
gi|223459952|gb|AAI38656.1| Bromodomain containing 2 [Mus musculus]
Length = 798
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 66/113 (58%), Gaps = 3/113 (2%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G S+ K C+ +L++L+ KH W F PVD LGLHDY II+HPMDL TVK ++
Sbjct: 343 GKLSEQLKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKM 402
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
Y+ +EFA DVRL F N YNP DV MA +L +FE ++ + E
Sbjct: 403 ENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDE 455
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 54/98 (55%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD LGL DY II+ PMD+GT+K RL N+Y + E +D
Sbjct: 85 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDF 144
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
F N YN D+ +MA+ L KIF K + E
Sbjct: 145 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQE 182
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 49/77 (63%), Gaps = 4/77 (5%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLF-QHDDEIEVDIDSVDAETLWEL 608
R M+YDEK++LS ++ LP EKL +V II+ R SL + +EIE+D +++ TL EL
Sbjct: 638 RPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREPSLRDSNPEEIEIDFETLKPSTLREL 697
Query: 609 DRFVTNYKKSLSKNKRK 625
+R+V + L K RK
Sbjct: 698 ERYVLS---CLRKKPRK 711
>gi|351703550|gb|EHB06469.1| Bromodomain-containing protein 2 [Heterocephalus glaber]
Length = 798
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 66/113 (58%), Gaps = 3/113 (2%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G S+ K C+ +L++L+ KH W F PVD LGLHDY II+HPMDL TVK ++
Sbjct: 343 GKLSEQLKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKM 402
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
Y+ +EFA DVRL F N YNP DV MA +L +FE ++ + E
Sbjct: 403 ENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDE 455
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 53/98 (54%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD LGL DY II+ PMD+GT+K RL +Y + E +D
Sbjct: 85 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENTYYWAASECMQDF 144
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
F N YN D+ +MA+ L KIF K + E
Sbjct: 145 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQE 182
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 49/77 (63%), Gaps = 4/77 (5%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLF-QHDDEIEVDIDSVDAETLWEL 608
R M+YDEK++LS ++ LP EKL +V II+ R SL + +EIE+D +++ TL EL
Sbjct: 638 RPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREPSLRDSNPEEIEIDFETLKPSTLREL 697
Query: 609 DRFVTNYKKSLSKNKRK 625
+R+V + L K RK
Sbjct: 698 ERYVLS---CLRKKPRK 711
>gi|345326866|ref|XP_001506320.2| PREDICTED: bromodomain-containing protein 4 [Ornithorhynchus
anatinus]
Length = 719
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 48/110 (43%), Positives = 67/110 (60%), Gaps = 3/110 (2%)
Query: 369 SKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN 425
S+ K CS +++++ KH W F PVDV+ LGLHDY II+HPMDL T+K++L
Sbjct: 349 SEQLKYCSGIIKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDLSTIKSKLENR 408
Query: 426 WYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
Y+ +EFA DVRL F N YNP +V MA +L +FE ++ + E
Sbjct: 409 EYRDAQEFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE 458
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 56/99 (56%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
+L+ L KH+ W F PVD L L DY+ II+ PMD+GT++ RL N+Y + E +D
Sbjct: 69 VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIRKRLENNYYWNAHECIQD 128
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
F N YN G D+ +MAE L K+F K + SE
Sbjct: 129 FNTMFTNCYIYNKPGDDIVLMAEALEKLFLQKISELPSE 167
>gi|440909604|gb|ELR59493.1| Bromodomain-containing protein 2 [Bos grunniens mutus]
Length = 810
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 66/113 (58%), Gaps = 3/113 (2%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G S+ K C+ +L++L+ KH W F PVD LGLHDY II+HPMDL TVK ++
Sbjct: 344 GKLSEQLKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKM 403
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
Y+ +EFA DVRL F N YNP DV MA +L +FE ++ + E
Sbjct: 404 ENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDE 456
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 54/98 (55%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD LGL DY II+ PMD+GT+K RL N+Y + E +D
Sbjct: 86 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDF 145
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
F N YN D+ +MA+ L KIF K + E
Sbjct: 146 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQE 183
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 49/77 (63%), Gaps = 4/77 (5%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLF-QHDDEIEVDIDSVDAETLWEL 608
R M+YDEK++LS ++ LP EKL +V II+ R SL + +EIE+D +++ TL EL
Sbjct: 649 RPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREPSLRDSNPEEIEIDFETLKPSTLREL 708
Query: 609 DRFVTNYKKSLSKNKRK 625
+R+V + L K RK
Sbjct: 709 ERYVLS---CLRKKPRK 722
>gi|348576418|ref|XP_003473984.1| PREDICTED: bromodomain-containing protein 2 [Cavia porcellus]
Length = 802
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 66/113 (58%), Gaps = 3/113 (2%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G S+ K C+ +L++L+ KH W F PVD LGLHDY II+HPMDL TVK ++
Sbjct: 343 GKLSEQLKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKM 402
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
Y+ +EFA DVRL F N YNP DV MA +L +FE ++ + E
Sbjct: 403 ENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDE 455
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 53/98 (54%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD LGL DY II+ PMD+GT+K RL +Y + E +D
Sbjct: 85 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENTYYWAASECMQDF 144
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
F N YN D+ +MA+ L KIF K + E
Sbjct: 145 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQE 182
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 49/77 (63%), Gaps = 4/77 (5%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLF-QHDDEIEVDIDSVDAETLWEL 608
R M+YDEK++LS ++ LP EKL +V II+ R SL + +EIE+D +++ TL EL
Sbjct: 641 RPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREPSLRDSNPEEIEIDFETLKPSTLREL 700
Query: 609 DRFVTNYKKSLSKNKRK 625
+R+V + L K RK
Sbjct: 701 ERYVLS---CLRKKPRK 714
>gi|410902639|ref|XP_003964801.1| PREDICTED: uncharacterized protein LOC101061335 [Takifugu rubripes]
Length = 1416
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 63/104 (60%), Gaps = 3/104 (2%)
Query: 375 CSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPK 431
C++L+ +++ KH W F PVD LGLHDY II+HPMDL T+K +L Y+ P+
Sbjct: 374 CASLVREMVSKKHAAYAWPFYKPVDADALGLHDYHDIIKHPMDLSTIKAKLENRQYREPQ 433
Query: 432 EFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
EFA DVRL F N YNP +V MA +L +FE ++ + E
Sbjct: 434 EFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE 477
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 58/98 (59%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+L+ L KH+ W F APVD L L DY+TII+ PMD+GT+K RL ++Y + +E +D
Sbjct: 57 VLKTLWKHQFAWPFQAPVDAVKLNLPDYYTIIKTPMDMGTIKKRLENSYYWNAQECIQDF 116
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
F N YN G D+ +MAE L K+F K + E
Sbjct: 117 NTMFTNCYIYNKPGDDIVLMAEALEKVFLQKVTEMPQE 154
>gi|347968595|ref|XP_312107.4| AGAP002807-PA [Anopheles gambiae str. PEST]
gi|333467931|gb|EAA07774.4| AGAP002807-PA [Anopheles gambiae str. PEST]
Length = 870
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 52/110 (47%), Positives = 64/110 (58%), Gaps = 3/110 (2%)
Query: 369 SKIFKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN 425
S KSC+ +L++L KH W F PVD + LGLHDY II+ PMDLGTVK +++
Sbjct: 405 SDALKSCNEILKELFSKKHSGYAWPFYKPVDAELLGLHDYHDIIKKPMDLGTVKRKMDNR 464
Query: 426 WYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
YKS EFA DVRL F N YNP DV M +L +FE + I E
Sbjct: 465 EYKSAPEFAADVRLIFTNCYKYNPPDHDVVAMGRKLQDVFEMRLANIPDE 514
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 55/91 (60%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ + KH+ W F PVD K L L DY II+ PMDLGT+K RL N+Y + KE +D
Sbjct: 44 VMKAVWKHQFSWPFQQPVDAKKLNLPDYHKIIKQPMDLGTIKKRLENNYYWTSKECIQDF 103
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN G+DV +MA+ L K+F K
Sbjct: 104 NTMFTNCYVYNKPGEDVVVMAQTLEKLFLTK 134
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWEL 608
+ M+YDEK++LS ++ LP +KL +V II+ R SL + DEIE+D +++ TL EL
Sbjct: 716 KPMSYDEKRQLSLDINKLPGDKLGRVVHIIQSREPSLRDSNPDEIEIDFETLKPSTLREL 775
Query: 609 DRFVTN 614
+ +V +
Sbjct: 776 ESYVAS 781
>gi|345787686|ref|XP_541985.3| PREDICTED: LOW QUALITY PROTEIN: bromodomain-containing protein 4
isoform 1 [Canis lupus familiaris]
Length = 1360
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 47/110 (42%), Positives = 66/110 (60%), Gaps = 3/110 (2%)
Query: 369 SKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN 425
S+ K CS +L+++ KH W F PVDV+ LGLHDY II+HPMD+ T+K++L
Sbjct: 351 SEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAR 410
Query: 426 WYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
Y+ +EF DVRL F N YNP +V MA +L +FE ++ + E
Sbjct: 411 EYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE 460
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 60/107 (56%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+L+ L KH+ W F PVD L L DY+ II+ PMD+GT+K RL N+Y + +E +D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGA 484
F N YN G D+ +MAE L K+F K + +E M + A
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEETEIMIVQA 176
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 51/79 (64%), Gaps = 5/79 (6%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLF-QHDDEIEVDIDSVDAETLWEL 608
+ M+Y+EK++LS ++ LP EKL +V II+ R SL + DEIE+D +++ TL EL
Sbjct: 608 KPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLREL 667
Query: 609 DRFVTNYKKSLSKNKRKAE 627
+R+VT S + KRK +
Sbjct: 668 ERYVT----SCLRKKRKPQ 682
>gi|60360108|dbj|BAD90273.1| mKIAA4005 protein [Mus musculus]
Length = 818
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 66/113 (58%), Gaps = 3/113 (2%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G S+ K C+ +L++L+ KH W F PVD LGLHDY II+HPMDL TVK ++
Sbjct: 363 GKLSEQLKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKM 422
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
Y+ +EFA DVRL F N YNP DV MA +L +FE ++ + E
Sbjct: 423 ENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDE 475
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 54/98 (55%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD LGL DY II+ PMD+GT+K RL N+Y + E +D
Sbjct: 105 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDF 164
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
F N YN D+ +MA+ L KIF K + E
Sbjct: 165 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQE 202
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 49/77 (63%), Gaps = 4/77 (5%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLF-QHDDEIEVDIDSVDAETLWEL 608
R M+YDEK++LS ++ LP EKL +V II+ R SL + +EIE+D +++ TL EL
Sbjct: 658 RPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREPSLRDSNPEEIEIDFETLKLSTLREL 717
Query: 609 DRFVTNYKKSLSKNKRK 625
+R+V + L K RK
Sbjct: 718 ERYVLS---CLRKKPRK 731
>gi|410053415|ref|XP_512452.4| PREDICTED: bromodomain-containing protein 4 [Pan troglodytes]
Length = 1161
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 47/110 (42%), Positives = 66/110 (60%), Gaps = 3/110 (2%)
Query: 369 SKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN 425
S+ K CS +L+++ KH W F PVDV+ LGLHDY II+HPMD+ T+K++L
Sbjct: 351 SEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAR 410
Query: 426 WYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
Y+ +EF DVRL F N YNP +V MA +L +FE ++ + E
Sbjct: 411 EYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE 460
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 60/107 (56%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+L+ L KH+ W F PVD L L DY+ II+ PMD+GT+K RL N+Y + +E +D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGA 484
F N YN G D+ +MAE L K+F K + +E M + A
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEETEIMIVQA 176
>gi|47059183|ref|NP_997660.1| bromodomain-containing protein 2 [Rattus norvegicus]
gi|392355205|ref|XP_003751971.1| PREDICTED: bromodomain-containing protein 2-like [Rattus
norvegicus]
gi|81872356|sp|Q6MGA9.1|BRD2_RAT RecName: Full=Bromodomain-containing protein 2; AltName:
Full=Protein RING3
gi|46237556|emb|CAE83937.1| bromodomain-containing 2 [Rattus norvegicus]
gi|149043366|gb|EDL96817.1| bromodomain containing 2, isoform CRA_b [Rattus norvegicus]
Length = 798
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 66/113 (58%), Gaps = 3/113 (2%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G S+ K C+ +L++L+ KH W F PVD LGLHDY II+HPMDL TVK ++
Sbjct: 343 GKLSEQLKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKM 402
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
Y+ +EFA DVRL F N YNP DV MA +L +FE ++ + E
Sbjct: 403 ENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDE 455
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 54/98 (55%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD LGL DY II+ PMD+GT+K RL N+Y + E +D
Sbjct: 85 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDF 144
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
F N YN D+ +MA+ L KIF K + E
Sbjct: 145 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQE 182
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 49/77 (63%), Gaps = 4/77 (5%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLF-QHDDEIEVDIDSVDAETLWEL 608
R M+YDEK++LS ++ LP EKL +V II+ R SL + +EIE+D +++ TL EL
Sbjct: 638 RPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREPSLRDSNPEEIEIDFETLKPSTLREL 697
Query: 609 DRFVTNYKKSLSKNKRK 625
+R+V + L K RK
Sbjct: 698 ERYVLS---CLRKKPRK 711
>gi|417404705|gb|JAA49093.1| Putative transcription initiation factor tfiid subunit bdf1
[Desmodus rotundus]
Length = 799
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 66/113 (58%), Gaps = 3/113 (2%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G S+ K C+ +L++L+ KH W F PVD LGLHDY II+HPMDL TVK ++
Sbjct: 344 GKLSEQLKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKM 403
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
Y+ +EFA DVRL F N YNP DV MA +L +FE ++ + E
Sbjct: 404 ENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDE 456
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 54/98 (55%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD LGL DY II+ PMD+GT+K RL N+Y + E +D
Sbjct: 86 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDF 145
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
F N YN D+ +MA+ L KIF K + E
Sbjct: 146 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQE 183
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 49/77 (63%), Gaps = 4/77 (5%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLF-QHDDEIEVDIDSVDAETLWEL 608
R M+YDEK++LS ++ LP EKL +V II+ R SL + +EIE+D +++ TL EL
Sbjct: 638 RPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREPSLRDSNPEEIEIDFETLKPSTLREL 697
Query: 609 DRFVTNYKKSLSKNKRK 625
+R+V + L K RK
Sbjct: 698 ERYVLS---CLRKKPRK 711
>gi|291396003|ref|XP_002714557.1| PREDICTED: bromodomain containing 2 [Oryctolagus cuniculus]
Length = 802
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 66/113 (58%), Gaps = 3/113 (2%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G S+ K C+ +L++L+ KH W F PVD LGLHDY II+HPMDL TVK ++
Sbjct: 344 GKLSEQLKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKM 403
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
Y+ +EFA DVRL F N YNP DV MA +L +FE ++ + E
Sbjct: 404 ENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDE 456
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 54/98 (55%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD LGL DY II+ PMD+GT+K RL N+Y + E +D
Sbjct: 86 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDF 145
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
F N YN D+ +MA+ L KIF K + E
Sbjct: 146 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQE 183
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 49/77 (63%), Gaps = 4/77 (5%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLF-QHDDEIEVDIDSVDAETLWEL 608
R M+YDEK++LS ++ LP EKL +V II+ R SL + +EIE+D +++ TL EL
Sbjct: 641 RPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREPSLRDSNPEEIEIDFETLKPSTLREL 700
Query: 609 DRFVTNYKKSLSKNKRK 625
+R+V + L K RK
Sbjct: 701 ERYVLS---CLRKKPRK 714
>gi|3273701|gb|AAC24810.1| female sterile homeotic-related protein Frg-1 [Mus musculus]
Length = 798
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 66/113 (58%), Gaps = 3/113 (2%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G S+ K C+ +L++L+ KH W F PVD LGLHDY II+HPMDL TVK ++
Sbjct: 343 GKLSEQLKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKM 402
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
Y+ +EFA DVRL F N YNP DV MA +L +FE ++ + E
Sbjct: 403 ENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDE 455
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 54/98 (55%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD LGL DY II+ PMD+GT+K RL N+Y + E +D
Sbjct: 85 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDF 144
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
F N YN D+ +MA+ L KIF K + E
Sbjct: 145 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQE 182
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 49/77 (63%), Gaps = 4/77 (5%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLF-QHDDEIEVDIDSVDAETLWEL 608
R M+YDEK++LS ++ LP EKL +V II+ R SL + +EIE+D +++ TL EL
Sbjct: 638 RPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREPSLRDSNPEEIEIDFETLKPSTLREL 697
Query: 609 DRFVTNYKKSLSKNKRK 625
+R+V + L K RK
Sbjct: 698 ERYVLS---CLRKKPRK 711
>gi|402866610|ref|XP_003897472.1| PREDICTED: bromodomain-containing protein 2 [Papio anubis]
Length = 804
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 66/113 (58%), Gaps = 3/113 (2%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G S+ K C+ +L++L+ KH W F PVD LGLHDY II+HPMDL TVK ++
Sbjct: 344 GKLSEQLKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKM 403
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
Y+ +EFA DVRL F N YNP DV MA +L +FE ++ + E
Sbjct: 404 ENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDE 456
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 54/98 (55%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD LGL DY II+ PMD+GT+K RL N+Y + E +D
Sbjct: 86 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDF 145
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
F N YN D+ +MA+ L KIF K + E
Sbjct: 146 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQE 183
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLF-QHDDEIEVDIDSVDAETLWEL 608
R M+YDEK++LS ++ LP EKL +V II+ R SL + +EIE+D +++ TL +L
Sbjct: 641 RPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREPSLRDSNPEEIEIDSETLKPSTLRKL 700
Query: 609 DRFV 612
+ ++
Sbjct: 701 ELYM 704
>gi|327264790|ref|XP_003217194.1| PREDICTED: bromodomain-containing protein 4-like [Anolis
carolinensis]
Length = 1344
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 48/110 (43%), Positives = 67/110 (60%), Gaps = 3/110 (2%)
Query: 369 SKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN 425
S+ K CS +++++ KH W F PVDV+ LGLHDY II+HPMDL T+K++L
Sbjct: 353 SEQLKYCSGIIKEMFAKKHAAYAWPFYKPVDVEALGLHDYRDIIKHPMDLSTIKSKLENR 412
Query: 426 WYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
Y+ +EFA DVRL F N YNP +V MA +L +FE ++ + E
Sbjct: 413 DYRDAQEFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE 462
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 54/91 (59%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+L+ L KH+ W F PVD L L DY+ II+ PMD+GT+K RL N+Y + +E +D
Sbjct: 70 VLKTLWKHQFSWPFQQPVDAVKLQLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN G D+ +MAE L K+F K
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
>gi|313747417|ref|NP_001186384.1| bromodomain-containing protein 2 isoform 2 [Homo sapiens]
gi|39645317|gb|AAH63840.1| BRD2 protein [Homo sapiens]
Length = 836
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 66/113 (58%), Gaps = 3/113 (2%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G S+ K C+ +L++L+ KH W F PVD LGLHDY II+HPMDL TVK ++
Sbjct: 344 GKLSEQLKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKM 403
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
Y+ +EFA DVRL F N YNP DV MA +L +FE ++ + E
Sbjct: 404 ENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDE 456
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 54/98 (55%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD LGL DY II+ PMD+GT+K RL N+Y + E +D
Sbjct: 86 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDF 145
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
F N YN D+ +MA+ L KIF K + E
Sbjct: 146 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQE 183
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 49/77 (63%), Gaps = 4/77 (5%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLF-QHDDEIEVDIDSVDAETLWEL 608
R M+YDEK++LS ++ LP EKL +V II+ R SL + +EIE+D +++ TL EL
Sbjct: 675 RPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREPSLRDSNPEEIEIDFETLKPSTLREL 734
Query: 609 DRFVTNYKKSLSKNKRK 625
+R+V + L K RK
Sbjct: 735 ERYVLS---CLRKKPRK 748
>gi|357118940|ref|XP_003561205.1| PREDICTED: transcription factor GTE1-like [Brachypodium distachyon]
Length = 343
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 141/306 (46%), Gaps = 37/306 (12%)
Query: 355 KQAGNELAHGFGTGSKIFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMD 414
+ A N +H G S++ + ++ + H F PVDV L L DY+ II PMD
Sbjct: 61 RYAANGGSHCKGM-SELMRQFGGIIRTVTNHDWAEPFLKPVDVVGLQLDDYYKIITKPMD 119
Query: 415 LGTVKTRL---NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWV- 470
T++ ++ + Y + +E DVRL F NAM YN + DVHIMA+ LL+ FE+KW+
Sbjct: 120 FSTIRNKMEGKDGTKYNNVREIYSDVRLIFANAMKYNDEHHDVHIMAKLLLERFEEKWLH 179
Query: 471 VIESEYNREMRIGADYEMGFHTPTSRKAPPLPPPLDMRRILDRSESITHPMDSRLKPIST 530
++ N E +I + P + P + ++ ++ + ++ +L+ +
Sbjct: 180 LLPKVENEERKIKEE-------PNDVPSTNTSPEAAIAKLAKDTDDELNEINKQLEDLRK 232
Query: 531 TPSSRTPAPKKPKAKDPHKRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD 590
R R MT DEK+KL L L + L ++++ + N S
Sbjct: 233 MVVQRC-------------RKMTTDEKRKLGAGLCHLTPDDLSKALEMVAQDNPSFQISG 279
Query: 591 DEIEVDIDSVDAETLWELDRFVTNYKKSLSK---------NKRKAELANQARAVAQQNVQ 641
+E+++D+D+ TLW L FV + +K KRK E+ N A+A+ N +
Sbjct: 280 EEVDLDMDAQTETTLWRLKFFVREALERQAKAAPDKTDENAKRKREICN---ALAKTNSK 336
Query: 642 QQTPAP 647
+ P
Sbjct: 337 RIKKQP 342
>gi|395513633|ref|XP_003761027.1| PREDICTED: bromodomain-containing protein 4 [Sarcophilus harrisii]
Length = 1379
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 47/110 (42%), Positives = 67/110 (60%), Gaps = 3/110 (2%)
Query: 369 SKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN 425
S+ K C+ +++++ KH W F PVDV+ LGLHDY II+HPMDL T+K++L
Sbjct: 372 SEQLKYCTGIIKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDLSTIKSKLETR 431
Query: 426 WYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
Y+ +EFA DVRL F N YNP +V MA +L +FE ++ + E
Sbjct: 432 EYRDAQEFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE 481
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 53/92 (57%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
+L+ L KH+ W F PVD L L DY+ II+ PMD+GT+K RL N+Y + E +D
Sbjct: 69 VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAHECIQD 128
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN G D+ +MAE L K+F K
Sbjct: 129 FNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 51/79 (64%), Gaps = 5/79 (6%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLF-QHDDEIEVDIDSVDAETLWEL 608
+ M+Y+EK++LS ++ LP EKL +V II+ R SL + DEIE+D +++ TL EL
Sbjct: 629 KPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLREL 688
Query: 609 DRFVTNYKKSLSKNKRKAE 627
+R+VT S + KRK +
Sbjct: 689 ERYVT----SCLRKKRKPQ 703
>gi|431916886|gb|ELK16646.1| Bromodomain-containing protein 2 [Pteropus alecto]
Length = 833
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 66/113 (58%), Gaps = 3/113 (2%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G S+ K C+ +L++L+ KH W F PVD LGLHDY II+HPMDL TVK ++
Sbjct: 375 GKLSEQLKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKM 434
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
Y+ +EFA DVRL F N YNP DV MA +L +FE ++ + E
Sbjct: 435 ENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDE 487
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 54/98 (55%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD LGL DY II+ PMD+GT+K RL N+Y + E +D
Sbjct: 117 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDF 176
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
F N YN D+ +MA+ L KIF K + E
Sbjct: 177 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQE 214
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 49/77 (63%), Gaps = 4/77 (5%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLF-QHDDEIEVDIDSVDAETLWEL 608
R M+YDEK++LS ++ LP EKL +V II+ R SL + +EIE+D +++ TL EL
Sbjct: 672 RPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREPSLRDSNPEEIEIDFETLKPSTLREL 731
Query: 609 DRFVTNYKKSLSKNKRK 625
+R+V + L K RK
Sbjct: 732 ERYVLS---CLRKKPRK 745
>gi|115530796|emb|CAL49346.1| bromodomain containing 2 [Xenopus (Silurana) tropicalis]
Length = 529
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 49/113 (43%), Positives = 68/113 (60%), Gaps = 3/113 (2%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G S+ K C+ +L++L+ KH W F PVDV LGLHDY+ II+HPMDL T+K ++
Sbjct: 338 GKLSEQLKYCNGILKELLSKKHAAYAWPFYKPVDVSALGLHDYYDIIKHPMDLSTIKKKM 397
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
+ +K +EFA VRL F N YNP DV MA +L +FE ++ + E
Sbjct: 398 DNREFKDAQEFAAAVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDE 450
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 52/92 (56%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
+++ L KH+ W F PVD LGL DY II+ PMD+GT+K RL N+Y S E +D
Sbjct: 85 VVMKSLWKHQFSWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKKRLENNYYWSALECMQD 144
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN D+ +MA+ L K+F K
Sbjct: 145 FNTMFTNCYIYNKPTDDIVLMAQSLEKMFLQK 176
>gi|52350614|gb|AAH82782.1| Brd4 protein, partial [Mus musculus]
Length = 582
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 76/137 (55%), Gaps = 6/137 (4%)
Query: 342 PAESNKKSKLNGKKQAGNELAHGFGTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVK 398
P + KK + ++ G E + S+ K CS +L+++ KH W F PVDV+
Sbjct: 328 PVKPPKKDVPDSQQHPGPEKSSKI---SEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVE 384
Query: 399 NLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMA 458
LGLHDY II+HPMD+ T+K++L Y+ +EF DVRL F N YNP +V MA
Sbjct: 385 ALGLHDYCDIIKHPMDMSTIKSKLESREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMA 444
Query: 459 EQLLKIFEDKWVVIESE 475
+L +FE ++ + E
Sbjct: 445 RKLQDVFEMRFAKMPDE 461
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 60/107 (56%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+L+ L KH+ W F PVD L L DY+ II+ PMD+GT+K RL N+Y + +E +D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGA 484
F N YN G D+ +MAE L K+F K + +E M + A
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEETEIMIVQA 176
>gi|71681018|gb|AAI00642.1| Brd4 protein, partial [Rattus norvegicus]
Length = 566
Score = 106 bits (264), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 76/137 (55%), Gaps = 6/137 (4%)
Query: 342 PAESNKKSKLNGKKQAGNELAHGFGTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVK 398
P + KK + ++ G E + S+ K CS +L+++ KH W F PVDV+
Sbjct: 328 PVKPPKKDVPDSQQHPGPEKSSKI---SEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVE 384
Query: 399 NLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMA 458
LGLHDY II+HPMD+ T+K++L Y+ +EF DVRL F N YNP +V MA
Sbjct: 385 ALGLHDYCDIIKHPMDMSTIKSKLESREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMA 444
Query: 459 EQLLKIFEDKWVVIESE 475
+L +FE ++ + E
Sbjct: 445 RKLQDVFEMRFAKMPDE 461
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 60/107 (56%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+L+ L KH+ W F PVD L L DY+ II+ PMD+GT+K RL N+Y + +E +D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGA 484
F N YN G D+ +MAE L K+F K + +E M + A
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEETEIMIVQA 176
>gi|326936210|ref|XP_003214150.1| PREDICTED: bromodomain-containing protein 4-like, partial
[Meleagris gallopavo]
Length = 697
Score = 106 bits (264), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 72/128 (56%), Gaps = 6/128 (4%)
Query: 354 KKQAGNELAHGFGTGSKI---FKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFT 407
KK + H SK+ K CS +++++ KH W F PVDV+ LGLHDY
Sbjct: 256 KKDVPDSQQHMVEKSSKVSEQLKYCSGIIKEMFAKKHAAYAWPFYKPVDVEALGLHDYCD 315
Query: 408 IIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFED 467
II+HPMDL T+K++L Y+ +EFA DVRL F N YNP +V MA +L +FE
Sbjct: 316 IIKHPMDLSTIKSKLENREYRDAQEFAADVRLMFSNCYKYNPADHEVVAMARKLQDVFEM 375
Query: 468 KWVVIESE 475
++ + E
Sbjct: 376 RFAKMPDE 383
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 54/92 (58%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
+L+ L KH+ W F PVD L L DY+ II+ PMD+GT+K RL N+Y + +E +D
Sbjct: 69 VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQD 128
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN G D+ +MAE L K+F K
Sbjct: 129 FNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
>gi|326490245|dbj|BAJ84786.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 352
Score = 106 bits (264), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 117/250 (46%), Gaps = 32/250 (12%)
Query: 371 IFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL---NKNWY 427
+ + + ++ ++ H+ F PVDV L L DY+ II PMD T++ ++ + Y
Sbjct: 86 LMRQLAGIIRQITSHEWSAPFLQPVDVVGLQLDDYYKIITKPMDFSTIQNKMEGKDGTKY 145
Query: 428 KSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVV----IESEYNREMRIG 483
KS +E DVRL F NAMTYN + DVHIMA+ LL+ FE+KW+ +E+E ++
Sbjct: 146 KSVREIYSDVRLIFTNAMTYNDELHDVHIMAKLLLEKFEEKWLQLLPKVENEERKQQMET 205
Query: 484 ADYEMGFHTPTSRKAPPLPPPLDMRRILDRSESITHPMDSRLKPIS-TTPSSRTPAPKKP 542
D PT+ +P D + D L I+ R ++
Sbjct: 206 ND------APTTDTSPE-----------DAIAQLAKDTDDELNEINKQLEELRNMVVQRC 248
Query: 543 KAKDPHKRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDA 602
K MT DEK+KL L L E ++++ + N +E+++D+D+
Sbjct: 249 KK-------MTTDEKRKLGAGLCHLTPEDFSKALELVAQDNPDFQTTAEELDLDMDAQSE 301
Query: 603 ETLWELDRFV 612
TLW L FV
Sbjct: 302 TTLWRLKFFV 311
>gi|74354344|gb|AAI03774.1| Brd4 protein, partial [Mus musculus]
Length = 557
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 76/137 (55%), Gaps = 6/137 (4%)
Query: 342 PAESNKKSKLNGKKQAGNELAHGFGTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVK 398
P + KK + ++ G E + S+ K CS +L+++ KH W F PVDV+
Sbjct: 328 PVKPPKKDVPDSQQHPGPEKSSKI---SEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVE 384
Query: 399 NLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMA 458
LGLHDY II+HPMD+ T+K++L Y+ +EF DVRL F N YNP +V MA
Sbjct: 385 ALGLHDYCDIIKHPMDMSTIKSKLESREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMA 444
Query: 459 EQLLKIFEDKWVVIESE 475
+L +FE ++ + E
Sbjct: 445 RKLQDVFEMRFAKMPDE 461
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 60/107 (56%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+L+ L KH+ W F PVD L L DY+ II+ PMD+GT+K RL N+Y + +E +D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGA 484
F N YN G D+ +MAE L K+F K + +E M + A
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEETEIMIVQA 176
>gi|74181884|dbj|BAE32643.1| unnamed protein product [Mus musculus]
Length = 545
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 76/137 (55%), Gaps = 6/137 (4%)
Query: 342 PAESNKKSKLNGKKQAGNELAHGFGTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVK 398
P + KK + ++ G E + S+ K CS +L+++ KH W F PVDV+
Sbjct: 328 PVKPPKKDVPDSQQHPGPEKSSKI---SEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVE 384
Query: 399 NLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMA 458
LGLHDY II+HPMD+ T+K++L Y+ +EF DVRL F N YNP +V MA
Sbjct: 385 ALGLHDYCDIIKHPMDMSTIKSKLESREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMA 444
Query: 459 EQLLKIFEDKWVVIESE 475
+L +FE ++ + E
Sbjct: 445 RKLQDVFEMRFAKMPDE 461
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 60/107 (56%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+L+ L KH+ W F PVD L L DY+ II+ PMD+GT+K RL N+Y + +E +D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGA 484
F N YN G D+ +MAE L K+F K + +E M + A
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEETEIMIVQA 176
>gi|380792783|gb|AFE68267.1| bromodomain-containing protein 4 isoform short, partial [Macaca
mulatta]
Length = 553
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 74/135 (54%), Gaps = 5/135 (3%)
Query: 369 SKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN 425
S+ K CS +L+++ KH W F PVDV+ LGLHDY II+HPMD+ T+K++L
Sbjct: 351 SEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAR 410
Query: 426 WYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGAD 485
Y+ +EF DVRL F N YNP +V MA +L +FE ++ + E E + A
Sbjct: 411 EYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE--PEEPVVAV 468
Query: 486 YEMGFHTPTSRKAPP 500
PT APP
Sbjct: 469 SSPAVPPPTKVVAPP 483
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 54/91 (59%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+L+ L KH+ W F PVD L L DY+ II+ PMD+GT+K RL N+Y + +E +D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN G D+ +MAE L K+F K
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
>gi|45501005|gb|AAH67129.1| BRD4 protein, partial [Homo sapiens]
gi|116283901|gb|AAH47888.1| BRD4 protein [Homo sapiens]
Length = 548
Score = 105 bits (263), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 74/135 (54%), Gaps = 5/135 (3%)
Query: 369 SKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN 425
S+ K CS +L+++ KH W F PVDV+ LGLHDY II+HPMD+ T+K++L
Sbjct: 351 SEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAR 410
Query: 426 WYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGAD 485
Y+ +EF DVRL F N YNP +V MA +L +FE ++ + E E + A
Sbjct: 411 EYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE--PEEPVVAV 468
Query: 486 YEMGFHTPTSRKAPP 500
PT APP
Sbjct: 469 SSPAVPPPTKVVAPP 483
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 54/91 (59%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+L+ L KH+ W F PVD L L DY+ II+ PMD+GT+K RL N+Y + +E +D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN G D+ +MAE L K+F K
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
>gi|60649450|gb|AAH91649.1| BRD4 protein, partial [Homo sapiens]
Length = 550
Score = 105 bits (263), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 74/135 (54%), Gaps = 5/135 (3%)
Query: 369 SKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN 425
S+ K CS +L+++ KH W F PVDV+ LGLHDY II+HPMD+ T+K++L
Sbjct: 351 SEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAR 410
Query: 426 WYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGAD 485
Y+ +EF DVRL F N YNP +V MA +L +FE ++ + E E + A
Sbjct: 411 EYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE--PEEPVVAV 468
Query: 486 YEMGFHTPTSRKAPP 500
PT APP
Sbjct: 469 SSPAVPPPTKVVAPP 483
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 54/91 (59%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+L+ L KH+ W F PVD L L DY+ II+ PMD+GT+K RL N+Y + +E +D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN G D+ +MAE L K+F K
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
>gi|116283228|gb|AAH00156.1| BRD4 protein [Homo sapiens]
gi|116283846|gb|AAH38988.1| BRD4 protein [Homo sapiens]
Length = 549
Score = 105 bits (263), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 74/135 (54%), Gaps = 5/135 (3%)
Query: 369 SKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN 425
S+ K CS +L+++ KH W F PVDV+ LGLHDY II+HPMD+ T+K++L
Sbjct: 351 SEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAR 410
Query: 426 WYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGAD 485
Y+ +EF DVRL F N YNP +V MA +L +FE ++ + E E + A
Sbjct: 411 EYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE--PEEPVVAV 468
Query: 486 YEMGFHTPTSRKAPP 500
PT APP
Sbjct: 469 SSPAVPPPTKVVAPP 483
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 54/91 (59%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+L+ L KH+ W F PVD L L DY+ II+ PMD+GT+K RL N+Y + +E +D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN G D+ +MAE L K+F K
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
>gi|33879612|gb|AAH30158.1| BRD4 protein, partial [Homo sapiens]
Length = 548
Score = 105 bits (263), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 74/135 (54%), Gaps = 5/135 (3%)
Query: 369 SKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN 425
S+ K CS +L+++ KH W F PVDV+ LGLHDY II+HPMD+ T+K++L
Sbjct: 351 SEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAR 410
Query: 426 WYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGAD 485
Y+ +EF DVRL F N YNP +V MA +L +FE ++ + E E + A
Sbjct: 411 EYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE--PEEPVVAV 468
Query: 486 YEMGFHTPTSRKAPP 500
PT APP
Sbjct: 469 SSPAVPPPTKVVAPP 483
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 54/91 (59%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+L+ L KH+ W F PVD L L DY+ II+ PMD+GT+K RL N+Y + +E +D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN G D+ +MAE L K+F K
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
>gi|71052031|gb|AAH35266.1| BRD4 protein [Homo sapiens]
gi|119604876|gb|EAW84470.1| bromodomain containing 4, isoform CRA_b [Homo sapiens]
gi|119604877|gb|EAW84471.1| bromodomain containing 4, isoform CRA_b [Homo sapiens]
Length = 794
Score = 105 bits (263), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 74/135 (54%), Gaps = 5/135 (3%)
Query: 369 SKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN 425
S+ K CS +L+++ KH W F PVDV+ LGLHDY II+HPMD+ T+K++L
Sbjct: 351 SEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAR 410
Query: 426 WYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGAD 485
Y+ +EF DVRL F N YNP +V MA +L +FE ++ + E E + A
Sbjct: 411 EYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE--PEEPVVAV 468
Query: 486 YEMGFHTPTSRKAPP 500
PT APP
Sbjct: 469 SSPAVPPPTKVVAPP 483
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 54/91 (59%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+L+ L KH+ W F PVD L L DY+ II+ PMD+GT+K RL N+Y + +E +D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN G D+ +MAE L K+F K
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 51/79 (64%), Gaps = 5/79 (6%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLF-QHDDEIEVDIDSVDAETLWEL 608
+ M+Y+EK++LS ++ LP EKL +V II+ R SL + DEIE+D +++ TL EL
Sbjct: 608 KPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLREL 667
Query: 609 DRFVTNYKKSLSKNKRKAE 627
+R+VT S + KRK +
Sbjct: 668 ERYVT----SCLRKKRKPQ 682
>gi|395533918|ref|XP_003768996.1| PREDICTED: bromodomain-containing protein 2-like [Sarcophilus
harrisii]
Length = 800
Score = 105 bits (263), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 66/113 (58%), Gaps = 3/113 (2%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G S+ K C+ +L++L+ KH W F PVD LGLHDY II+HPMDL TVK ++
Sbjct: 345 GKLSEQLKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKM 404
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
Y+ +EFA DVRL F N YNP DV MA +L +FE ++ + E
Sbjct: 405 ENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDE 457
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 55/98 (56%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD LGL DY II+ PMD+GT+K RL N+Y E +D
Sbjct: 86 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWLASECMQDF 145
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
F N YN D+ +MA+ L KIF K ++ SE
Sbjct: 146 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVALMPSE 183
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 49/77 (63%), Gaps = 4/77 (5%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWEL 608
R M+YDEK++LS ++ LP EKL +V II+ R SL + +EIE+D +++ TL EL
Sbjct: 641 RPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREPSLRDSNPEEIEIDFETLKPSTLREL 700
Query: 609 DRFVTNYKKSLSKNKRK 625
+R+V + L K RK
Sbjct: 701 ERYVLS---CLRKKPRK 714
>gi|126309678|ref|XP_001369391.1| PREDICTED: bromodomain-containing protein 2-like [Monodelphis
domestica]
Length = 801
Score = 105 bits (263), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 66/113 (58%), Gaps = 3/113 (2%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G S+ K C+ +L++L+ KH W F PVD LGLHDY II+HPMDL TVK ++
Sbjct: 345 GKLSEQLKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKM 404
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
Y+ +EFA DVRL F N YNP DV MA +L +FE ++ + E
Sbjct: 405 ENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDE 457
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 55/98 (56%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD LGL DY II+ PMD+GT+K RL N+Y E +D
Sbjct: 86 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWLASECMQDF 145
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
F N YN D+ +MA+ L KIF K ++ SE
Sbjct: 146 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVALMPSE 183
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 49/77 (63%), Gaps = 4/77 (5%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWEL 608
R M+YDEK++LS ++ LP EKL +V II+ R SL + +EIE+D +++ TL EL
Sbjct: 642 RPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREPSLRDSNPEEIEIDFETLKPSTLREL 701
Query: 609 DRFVTNYKKSLSKNKRK 625
+R+V + L K RK
Sbjct: 702 ERYVLS---CLRKKPRK 715
>gi|339245937|ref|XP_003374602.1| putative bromodomain protein [Trichinella spiralis]
gi|316972199|gb|EFV55887.1| putative bromodomain protein [Trichinella spiralis]
Length = 847
Score = 105 bits (263), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 48/113 (42%), Positives = 69/113 (61%), Gaps = 4/113 (3%)
Query: 361 LAHGF-GTGSKIFKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLG 416
+ H + G ++ K C ++++L+ +H W F PVDV+ LGLHDY+ +I PMDLG
Sbjct: 358 MKHKYKGKLNEQMKFCYGIVKELLSKRHSEYAWPFYKPVDVEGLGLHDYYDVIEVPMDLG 417
Query: 417 TVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKW 469
TV+ +L Y SP EFA DVRL F N YNP +V MA+ + +IFE ++
Sbjct: 418 TVRRKLECREYGSPSEFAADVRLIFSNCYRYNPPDHEVVKMAKTISEIFEQRF 470
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 60/98 (61%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+L +++HKH W F+ PVD L L DY II+ PMDLGT++ RL +Y S ++ +D
Sbjct: 109 VLRAVLRHKHSWPFSKPVDAAKLNLVDYHDIIKRPMDLGTIEKRLRNCYYYSSQQSMQDF 168
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
F N TYNP G D+ +MA+ L K+F +K + SE
Sbjct: 169 MTMFTNCYTYNPPGSDIVVMAQALEKVFLEKIAHMPSE 206
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 47/74 (63%), Gaps = 4/74 (5%)
Query: 553 TYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSL-FQHDDEIEVDIDSVDAETLWELDRF 611
TYDEK++LS ++ LP +KL +VQII+ R +L + DEIE+D +++ TL EL+ +
Sbjct: 681 TYDEKRQLSLDINKLPGDKLGRVVQIIQAREPALRLSNLDEIEIDFETLKPATLRELEAY 740
Query: 612 VTNYKKSLSKNKRK 625
V + L K RK
Sbjct: 741 VAS---CLKKKVRK 751
>gi|355673426|gb|AER95168.1| bromodomain containing 4 [Mustela putorius furo]
Length = 551
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 74/135 (54%), Gaps = 5/135 (3%)
Query: 369 SKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN 425
S+ K CS +L+++ KH W F PVDV+ LGLHDY II+HPMD+ T+K++L
Sbjct: 361 SEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAR 420
Query: 426 WYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGAD 485
Y+ +EF DVRL F N YNP +V MA +L +FE ++ + E E + A
Sbjct: 421 EYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE--PEEPVVAV 478
Query: 486 YEMGFHTPTSRKAPP 500
PT APP
Sbjct: 479 SSPAVPPPTKVVAPP 493
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 54/92 (58%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
+L+ L KH+ W F PVD L L DY+ II+ PMD+GT+K RL N+Y + +E +D
Sbjct: 79 VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQD 138
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN G D+ +MAE L K+F K
Sbjct: 139 FNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 170
>gi|348536160|ref|XP_003455565.1| PREDICTED: bromodomain-containing protein 3 [Oreochromis niloticus]
Length = 678
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 46/107 (42%), Positives = 64/107 (59%), Gaps = 3/107 (2%)
Query: 372 FKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
K C A+L++++ KH W F PVD + L LHDY II+HPMDL T++ +++K Y
Sbjct: 308 MKHCDAILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTIRKKMDKGEYS 367
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
P+ FA DVRL F N YNP +V MA +L +FE ++ I E
Sbjct: 368 DPQSFATDVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKIPDE 414
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 53/91 (58%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD L LHDY +I++PMD+GT+K RL N+Y S E +D
Sbjct: 43 VVKTLWKHQFAWPFYQPVDAIKLCLHDYHKVIKNPMDMGTIKKRLENNYYWSASEAMQDF 102
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN D+ +MA+ L KIF K
Sbjct: 103 NTMFTNCYIYNKPTDDIVLMAQALEKIFLQK 133
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 49/75 (65%), Gaps = 4/75 (5%)
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWELDR 610
M+YDEK++LS ++ LP EKL +V II+ R SL + DEIE+D +++ TL EL+R
Sbjct: 566 MSYDEKRQLSLDINRLPGEKLGRVVHIIQTREPSLRDSNPDEIEIDFETLKPSTLRELER 625
Query: 611 FVTNYKKSLSKNKRK 625
+V K L K +RK
Sbjct: 626 YV---KSCLQKKQRK 637
>gi|224057894|ref|XP_002299377.1| global transcription factor group [Populus trichocarpa]
gi|222846635|gb|EEE84182.1| global transcription factor group [Populus trichocarpa]
Length = 224
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 75/237 (31%), Positives = 117/237 (49%), Gaps = 21/237 (8%)
Query: 381 KLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL---NKNWYKSPKEFAEDV 437
++ +HK W F PVDV+ L LHDY+ +I PMD T+K R+ + YK+ +E DV
Sbjct: 4 QIAQHKWAWPFLEPVDVEGLCLHDYYEVIEKPMDFRTIKNRMEAKDGTGYKNVREIYADV 63
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEMGFHTPTSRK 497
RL F NAM YN + DVH+MA LL+ FE+KW+ + + E + + T + K
Sbjct: 64 RLVFKNAMKYNDERDDVHVMARTLLEKFEEKWLQLLPKVAEEEKRREKEQTA--TQVATK 121
Query: 498 APPLPPPLDMRRILDRSESITHPMDSRLKPISTTPSSRTPAPKKPKAKDPHKRDMTYDEK 557
+M + D S + H +D +L+ I + R ++ +EK
Sbjct: 122 LAEESSYANMAQ--DLSNEL-HGVDMQLERIREMVVRNS-------------RKISTEEK 165
Query: 558 QKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWELDRFVTN 614
+KL T L L + L ++I+ + N S E+ +D+D+ TLW L FV +
Sbjct: 166 KKLGTALTQLSHQDLIRALEIVAEHNPSFQATAQEVNLDMDTQSDVTLWRLKVFVQD 222
>gi|20302741|gb|AAM18869.1|AF391288_5 unknown [Branchiostoma floridae]
Length = 664
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 49/107 (45%), Positives = 64/107 (59%), Gaps = 3/107 (2%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G S K C +++++ KH W F PVD LGLHDY II+HPMDLGTVK ++
Sbjct: 356 GKLSAQLKYCQGIIKEMFAKKHAAYAWPFYEPVDADLLGLHDYHEIIKHPMDLGTVKKKM 415
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKW 469
+ YKS +EFA D+R+ F N YNP DV MA +L +FE K+
Sbjct: 416 DTREYKSAQEFASDMRMIFSNCYRYNPPEHDVVQMARKLQDVFEMKY 462
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 56/92 (60%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
+++ + KH W F+ PVD L + DY II+ PMDLGT+K RL N+Y S KE +D
Sbjct: 47 VVMKAVWKHNFAWPFHEPVDWVKLNIPDYPKIIKTPMDLGTIKKRLETNYYYSAKECIQD 106
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
L F N YN G+DV++MA+ L K+F K
Sbjct: 107 FNLMFTNCYVYNKPGEDVYLMAQTLEKLFLQK 138
>gi|297466946|ref|XP_002704782.1| PREDICTED: LOW QUALITY PROTEIN: bromodomain-containing protein 4
[Bos taurus]
Length = 1368
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 46/110 (41%), Positives = 66/110 (60%), Gaps = 3/110 (2%)
Query: 369 SKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN 425
S+ K C+ +L+++ KH W F PVDV+ LGLHDY II+HPMD+ T+K++L
Sbjct: 351 SEQLKCCNGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAR 410
Query: 426 WYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
Y+ +EF DVRL F N YNP +V MA +L +FE ++ + E
Sbjct: 411 EYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE 460
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 54/91 (59%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+L+ L KH+ W F PVD L L DY+ II+ PMD+GT+K RL N+Y + +E +D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN G D+ +MAE L K+F K
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 51/79 (64%), Gaps = 5/79 (6%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLF-QHDDEIEVDIDSVDAETLWEL 608
+ M+Y+EK++LS ++ LP EKL +V II+ R SL + DEIE+D +++ TL EL
Sbjct: 608 KPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLREL 667
Query: 609 DRFVTNYKKSLSKNKRKAE 627
+R+VT S + KRK +
Sbjct: 668 ERYVT----SCLRKKRKPQ 682
>gi|297476378|ref|XP_002688607.1| PREDICTED: LOW QUALITY PROTEIN: bromodomain-containing protein 4
[Bos taurus]
gi|296486110|tpg|DAA28223.1| TPA: bromodomain containing 4 [Bos taurus]
Length = 1368
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 46/110 (41%), Positives = 66/110 (60%), Gaps = 3/110 (2%)
Query: 369 SKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN 425
S+ K C+ +L+++ KH W F PVDV+ LGLHDY II+HPMD+ T+K++L
Sbjct: 351 SEQLKCCNGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAR 410
Query: 426 WYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
Y+ +EF DVRL F N YNP +V MA +L +FE ++ + E
Sbjct: 411 EYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE 460
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 54/91 (59%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+L+ L KH+ W F PVD L L DY+ II+ PMD+GT+K RL N+Y + +E +D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN G D+ +MAE L K+F K
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 51/79 (64%), Gaps = 5/79 (6%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLF-QHDDEIEVDIDSVDAETLWEL 608
+ M+Y+EK++LS ++ LP EKL +V II+ R SL + DEIE+D +++ TL EL
Sbjct: 608 KPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLREL 667
Query: 609 DRFVTNYKKSLSKNKRKAE 627
+R+VT S + KRK +
Sbjct: 668 ERYVT----SCLRKKRKPQ 682
>gi|432094627|gb|ELK26133.1| Bromodomain-containing protein 2 [Myotis davidii]
Length = 881
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 66/113 (58%), Gaps = 3/113 (2%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G S+ K C+ +L++L+ KH W F PVD LGLHDY II+HPMDL TVK ++
Sbjct: 428 GKLSEQLKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKM 487
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
Y+ +EFA DVRL F N YNP DV MA +L +FE ++ + E
Sbjct: 488 ENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDE 540
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 52/91 (57%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD LGL DY II+ PMD+GT+K RL N+Y + E +D
Sbjct: 170 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDF 229
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN D+ +MA+ L KIF K
Sbjct: 230 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 260
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 49/77 (63%), Gaps = 4/77 (5%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWEL 608
R M+YDEK++LS ++ LP EKL +V II+ R SL + +EIE+D +++ TL EL
Sbjct: 720 RPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREPSLRDSNPEEIEIDFETLKPSTLREL 779
Query: 609 DRFVTNYKKSLSKNKRK 625
+R+V + L K RK
Sbjct: 780 ERYVLS---CLRKKPRK 793
>gi|67972378|dbj|BAE02531.1| unnamed protein product [Macaca fascicularis]
Length = 776
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 66/113 (58%), Gaps = 3/113 (2%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G S+ K C+ +L++L+ KH W F PVD LGLHDY II+HPMDL TVK ++
Sbjct: 297 GKLSEQLKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKM 356
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
Y+ +EFA DVRL F N YNP DV MA +L +FE ++ + E
Sbjct: 357 ENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDE 409
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 52/91 (57%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD LGL DY II+ PMD+GT+K RL N+Y + E +D
Sbjct: 39 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDF 98
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN D+ +MA+ L KIF K
Sbjct: 99 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 129
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 49/77 (63%), Gaps = 4/77 (5%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLF-QHDDEIEVDIDSVDAETLWEL 608
R M+YDEK++LS ++ LP EKL +V II+ R SL + +EIE+D +++ TL EL
Sbjct: 594 RPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREPSLRDSNPEEIEIDFETLKPSTLREL 653
Query: 609 DRFVTNYKKSLSKNKRK 625
+R+V + L K RK
Sbjct: 654 ERYVLS---CLRKKPRK 667
>gi|390466206|ref|XP_003733541.1| PREDICTED: LOW QUALITY PROTEIN: bromodomain testis-specific
protein-like [Callithrix jacchus]
Length = 932
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 67/116 (57%), Gaps = 3/116 (2%)
Query: 372 FKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
+ CS +L++++ KH W F PVDV LGLH+Y+ I+++PMDLGT+K +++ YK
Sbjct: 272 LRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMDNQEYK 331
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGA 484
EFA DVRL F N YNP +V MA L +FE + +I E M +
Sbjct: 332 DAYEFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFAMIPDEPVESMSLCC 387
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 51/92 (55%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
+L+ L KH W F PVD L L DY+TII++PMDL T+K RL +Y E ED
Sbjct: 38 VILKDLWKHDFSWPFQRPVDAVKLKLPDYYTIIKNPMDLNTIKKRLENKYYVKASECIED 97
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN G D+ +MA+ L ++F K
Sbjct: 98 FNTMFSNCYLYNKPGDDIVLMAQALEELFMQK 129
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 78/145 (53%), Gaps = 10/145 (6%)
Query: 541 KPKAKDPHKRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDS 599
KP+ +D + + M YDEK++LS ++ LP +KL +V II+ R SL DEIE+D ++
Sbjct: 499 KPEDED-NAKPMNYDEKRQLSLDINKLPGDKLGQVVNIIQSREPSLRNSSLDEIEIDFET 557
Query: 600 VDAETLWELDRFVTNY--KKSLSKNKRKAELANQARAVAQQNVQQQTPAPVVTEVRKEIR 657
+ A TL EL+++V+ K+ L +K + + +Q ++++ +V ++
Sbjct: 558 LKASTLRELEKYVSACLRKRPLKPPAKKTMSKEELHSQKKQELEKR-----FLDVNNQLN 612
Query: 658 TDDRIGSTSSPVQVEKQVDNGSRSS 682
+ R S Q K V +GSR S
Sbjct: 613 SRKR-QRKSEKTQPPKAVGSGSRLS 636
>gi|391337779|ref|XP_003743242.1| PREDICTED: bromodomain testis-specific protein-like [Metaseiulus
occidentalis]
Length = 802
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 47/113 (41%), Positives = 69/113 (61%), Gaps = 3/113 (2%)
Query: 366 GTGSKIFKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G ++ K C++++++L KH W F VDV+ LGLHDY+ II PMDLGT+KT++
Sbjct: 390 GKMTEKLKYCNSIIKELFAKKHSAYAWPFYTAVDVEGLGLHDYYDIITQPMDLGTIKTKM 449
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
+ Y++P +F DVRL F N YNP +V MA +L +FE K + +E
Sbjct: 450 ERREYRNPDDFCNDVRLVFMNCYKYNPADHEVVKMARKLQDVFEMKLTKMPNE 502
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 54/98 (55%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ + KH W F PVD L L DYF II+ PMDLGT+K RL +Y +E D
Sbjct: 79 VMKAVWKHNFAWPFQQPVDTIKLNLPDYFKIIKVPMDLGTIKKRLENCYYYDAQECINDF 138
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
+ F N YN G+DV +MA+ L K+F K + E
Sbjct: 139 NVLFSNCYIYNKPGEDVVLMAQSLEKLFLSKLAEMPQE 176
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 50/77 (64%), Gaps = 4/77 (5%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWEL 608
+ M+YDEK++LS ++ LP +KL +V II+ R SL + DEIE+D +++ TL EL
Sbjct: 635 KPMSYDEKRQLSLDINKLPGDKLGRVVHIIQSREPSLRDSNPDEIEIDFETLKPSTLREL 694
Query: 609 DRFVTNYKKSLSKNKRK 625
+ +V + L++N +K
Sbjct: 695 ESYVAS---CLARNAKK 708
>gi|28278510|gb|AAH45866.1| Brd2a protein [Danio rerio]
Length = 586
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/113 (42%), Positives = 68/113 (60%), Gaps = 3/113 (2%)
Query: 366 GTGSKIFKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G S+ + CS +L++L+ KH W F PVDV +LGLHDY+ II +PMDL T+K ++
Sbjct: 380 GKLSQQLRYCSTILKELLSKKHTAYAWPFYKPVDVSSLGLHDYYDIIMYPMDLSTIKRKM 439
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
+ Y+ +FA DVRL F N YNP DV MA +L +FE ++ + E
Sbjct: 440 DHREYRDALQFAADVRLMFSNCYKYNPPDHDVVAMARRLQDVFEFRFAKMPDE 492
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 53/92 (57%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
AL+ L +H W F+ PVD L L DY+ II+ PMD+GT+K RL N+Y+S E +D
Sbjct: 83 ALVRMLWRHHFAWPFHEPVDAAKLNLPDYYNIIKQPMDMGTIKKRLENNYYRSASECMQD 142
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
+ F N YN D+ +MA+ L K F K
Sbjct: 143 LNTMFTNCYIYNKPTDDIVLMAQSLEKAFLQK 174
>gi|301112310|ref|XP_002905234.1| histone acetyltransferase, putative [Phytophthora infestans T30-4]
gi|262095564|gb|EEY53616.1| histone acetyltransferase, putative [Phytophthora infestans T30-4]
Length = 2294
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/103 (48%), Positives = 65/103 (63%), Gaps = 11/103 (10%)
Query: 379 LEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVR 438
L +M+HK GWVFN PVD L + +YF I+R PMDLGTVK +L YK +EFA DVR
Sbjct: 1303 LRGMMEHKFGWVFNTPVDPVALNIPNYFKIVRKPMDLGTVKKKLELGIYKHTEEFAYDVR 1362
Query: 439 LTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMR 481
TF NAM YN + QDV+ +A+ +L +++N EMR
Sbjct: 1363 TTFQNAMQYNSEDQDVYSLAKDML-----------ADFNSEMR 1394
>gi|162287117|ref|NP_001104751.1| bromodomain-containing protein 4 [Danio rerio]
gi|159507457|gb|ABW97742.1| bromodomain 4 [Danio rerio]
Length = 1444
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/107 (42%), Positives = 62/107 (57%), Gaps = 3/107 (2%)
Query: 372 FKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
+ CS +++ + KH W F PVDV LGLHDY II+HPMDL T+K +L Y+
Sbjct: 364 LRYCSGIVKDMFAKKHAAYAWPFYKPVDVDTLGLHDYHDIIKHPMDLSTIKDKLETRQYR 423
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
+EFA DVRL F N YNP +V MA +L +FE ++ + E
Sbjct: 424 EAQEFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE 470
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 56/91 (61%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+L+ L KH+ W F+APVD L L DY+ II++PMD+GT+K RL +Y S +E +D
Sbjct: 55 VLKSLWKHQFAWPFHAPVDAVKLNLPDYYKIIKNPMDMGTIKKRLESAFYTSAQECIQDF 114
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN G D+ +MAE L K+F K
Sbjct: 115 NTMFTNCYIYNKPGDDIVLMAEALEKVFLTK 145
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 51/78 (65%), Gaps = 4/78 (5%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLF-QHDDEIEVDIDSVDAETLWEL 608
+ M+Y+EK++LS ++ LP +KL +V II+ R SL + DEIE+D +++ TL EL
Sbjct: 656 KPMSYEEKRQLSLDINKLPGDKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLREL 715
Query: 609 DRFVTNYKKSLSKNKRKA 626
+R+V++ L K K+ A
Sbjct: 716 ERYVSS---CLRKKKKPA 730
>gi|428180935|gb|EKX49800.1| hypothetical protein GUITHDRAFT_67457 [Guillardia theta CCMP2712]
Length = 117
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/96 (52%), Positives = 62/96 (64%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN 425
G S+ K C +L+ L HKHGWVF+ PVD L + DY II+ PMDLGTV+T L+
Sbjct: 3 GQKSEWVKKCIGILKVLKNHKHGWVFSEPVDPVKLNIPDYLEIIKKPMDLGTVRTHLDNG 62
Query: 426 WYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQL 461
+P+EF +V LTF NAM YNP DVHIMA+ L
Sbjct: 63 TITNPEEFKTNVVLTFDNAMRYNPSNHDVHIMAKTL 98
>gi|348686369|gb|EGZ26184.1| hypothetical protein PHYSODRAFT_483048 [Phytophthora sojae]
Length = 2258
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/109 (47%), Positives = 66/109 (60%), Gaps = 11/109 (10%)
Query: 373 KSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKE 432
K +L+ +M HK GWVFN PVD L + +YF IIR PMDLGTVK +L YK E
Sbjct: 1270 KKLEVILKGMMDHKFGWVFNTPVDPVALNIPNYFKIIRKPMDLGTVKKKLEAGIYKHTDE 1329
Query: 433 FAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMR 481
FA +VR TF NAM YN + QDV+ +A+ +L S++N EMR
Sbjct: 1330 FANEVRTTFENAMQYNSEDQDVYSLAKDML-----------SDFNGEMR 1367
>gi|255565481|ref|XP_002523731.1| bromodomain-containing protein, putative [Ricinus communis]
gi|223537035|gb|EEF38671.1| bromodomain-containing protein, putative [Ricinus communis]
Length = 532
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/107 (45%), Positives = 68/107 (63%), Gaps = 5/107 (4%)
Query: 371 IFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSP 430
+ C++L++ LM H GWVF PV+ L + II +PMDLGTVK++L + Y
Sbjct: 81 VIHQCASLVKSLMDHPCGWVFKEPVNPDKLKI-----IITNPMDLGTVKSKLENDRYFRI 135
Query: 431 KEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYN 477
+EFA DVRLTF NA+ NP VH MAE+L +IFE +W +E ++N
Sbjct: 136 EEFAADVRLTFSNALLCNPPPNCVHKMAEKLKRIFETRWNALEEKWN 182
>gi|403284014|ref|XP_003933383.1| PREDICTED: bromodomain testis-specific protein [Saimiri boliviensis
boliviensis]
Length = 1132
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/107 (42%), Positives = 64/107 (59%), Gaps = 3/107 (2%)
Query: 372 FKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
+ CS +L++++ KH W F PVDV LGLH+Y+ I+++PMDLGT+K +++ YK
Sbjct: 458 LRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMDNQEYK 517
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
EFA DVRL F N YNP +V MA L +FE + I E
Sbjct: 518 DAYEFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFATIPDE 564
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 51/92 (55%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
+L+ L KH W F PVD L L DY+TII++PMDL T+K RL +Y E ED
Sbjct: 220 VILKDLWKHDLSWPFQRPVDAVKLKLPDYYTIIKNPMDLNTIKKRLENKYYVKASECIED 279
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN G D+ +MA+ L ++F K
Sbjct: 280 FNTMFSNCYLYNKPGDDIVLMAQALEELFMQK 311
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 62/94 (65%), Gaps = 4/94 (4%)
Query: 541 KPKAKDPHKRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDS 599
KP+ +D + + M YDEK++LS ++ LP +KL +V II+ R SL + DEIE+D ++
Sbjct: 685 KPEDED-NAKPMNYDEKRQLSLDINKLPGDKLGRVVHIIQSREPSLRNSNPDEIEIDFET 743
Query: 600 VDAETLWELDRFVTNY--KKSLSKNKRKAELANQ 631
+ A TL EL+++V+ K+ L ++A+++N+
Sbjct: 744 LKASTLRELEKYVSACLRKRPLKPPAKRAKMSNE 777
>gi|2780777|dbj|BAA24378.1| Ring3 [Mus musculus]
gi|2780779|dbj|BAA24379.1| Ring3 [Mus musculus]
Length = 503
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 66/113 (58%), Gaps = 3/113 (2%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G S+ K C+ +L++L+ KH W F PVD LGLHDY II+HPMDL TVK ++
Sbjct: 297 GKLSEQLKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKM 356
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
Y+ +EFA DVRL F N YNP DV MA +L +FE ++ + E
Sbjct: 357 ENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDE 409
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 52/91 (57%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD LGL DY II+ PMD+GT+K RL N+Y + E +D
Sbjct: 39 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDF 98
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN D+ +MA+ L KIF K
Sbjct: 99 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 129
>gi|2780775|dbj|BAA24377.1| Ring3 [Mus musculus]
Length = 549
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 66/113 (58%), Gaps = 3/113 (2%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G S+ K C+ +L++L+ KH W F PVD LGLHDY II+HPMDL TVK ++
Sbjct: 343 GKLSEQLKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKM 402
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
Y+ +EFA DVRL F N YNP DV MA +L +FE ++ + E
Sbjct: 403 ENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDE 455
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 52/91 (57%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD LGL DY II+ PMD+GT+K RL N+Y + E +D
Sbjct: 85 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDF 144
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN D+ +MA+ L KIF K
Sbjct: 145 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 175
>gi|71897271|ref|NP_001025845.1| bromodomain-containing protein 2 [Gallus gallus]
gi|1370092|emb|CAA65449.1| kinase [Gallus gallus]
Length = 729
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/113 (43%), Positives = 64/113 (56%), Gaps = 3/113 (2%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G S+ K C+ +L++L+ KH W F PVD LGLHDY II+HPMDL T+K ++
Sbjct: 291 GKLSEQLKYCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHEIIKHPMDLSTIKRKM 350
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
Y +EFA DVRL F N YNP DV MA +L +FE + + E
Sbjct: 351 ENRDYHDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFSYAKMPDE 403
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 51/91 (56%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD LGL DY II+ PMD+GT+K RL N+Y E +D
Sbjct: 39 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWGAAECMQDF 98
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN D+ +MA+ L KIF K
Sbjct: 99 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 129
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 49/77 (63%), Gaps = 4/77 (5%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWEL 608
+ MTYDEK++LS ++ LP EKL +V II+ R SL + +EIE+D +++ TL EL
Sbjct: 568 KPMTYDEKRQLSLDINKLPGEKLGRVVHIIQSREPSLRDSNPEEIEIDFETLKPSTLREL 627
Query: 609 DRFVTNYKKSLSKNKRK 625
+R+V + L K RK
Sbjct: 628 ERYVLS---CLRKKPRK 641
>gi|427780035|gb|JAA55469.1| Putative bromodomain-containing protein 2 [Rhipicephalus
pulchellus]
Length = 873
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 58/89 (65%)
Query: 387 HGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMT 446
+ W F PVD + LGLHDY II+HPMDLGTVK +++ YKSP+EFA DVRL F N
Sbjct: 419 YAWPFYKPVDAELLGLHDYHEIIKHPMDLGTVKQKMDNREYKSPEEFAGDVRLIFTNCYK 478
Query: 447 YNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
YNP +V MA +L +FE ++ + E
Sbjct: 479 YNPPDHEVVAMARKLQDVFEMRYAKMPDE 507
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 54/89 (60%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
+++ + KH+ W F PVD L L DY IIRHPMDLGT+K RL +Y S +E ED
Sbjct: 69 VVMKAMWKHQFAWPFQQPVDTVKLNLPDYHRIIRHPMDLGTIKKRLEHCYYSSAQECIED 128
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIF 465
+ F N YN G+DV +MA+ L K+F
Sbjct: 129 FKTMFTNCYVYNKPGEDVVLMAQALEKLF 157
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 48/77 (62%), Gaps = 4/77 (5%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWEL 608
+ M+YDEK++LS ++ LP +KL +V II+ R SL + DEIE+D +++ TL EL
Sbjct: 705 KPMSYDEKRQLSLDINKLPGDKLGRVVHIIQSREPSLRDSNPDEIEIDFETLKPSTLREL 764
Query: 609 DRFVTNYKKSLSKNKRK 625
+ +V + L K RK
Sbjct: 765 ESYVAS---CLRKKPRK 778
>gi|332887140|dbj|BAJ53019.2| Bromodomain-containing protein 2 precursor [Gallus gallus]
Length = 733
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/113 (43%), Positives = 64/113 (56%), Gaps = 3/113 (2%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G S+ K C+ +L++L+ KH W F PVD LGLHDY II+HPMDL T+K ++
Sbjct: 295 GKLSEQLKYCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHEIIKHPMDLSTIKRKM 354
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
Y +EFA DVRL F N YNP DV MA +L +FE + + E
Sbjct: 355 ENRDYHDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFSYAKMPDE 407
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 51/91 (56%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD LGL DY II+ PMD+GT+K RL N+Y E +D
Sbjct: 39 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWGAAECMQDF 98
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN D+ +MA+ L KIF K
Sbjct: 99 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 129
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 49/77 (63%), Gaps = 4/77 (5%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWEL 608
+ MTYDEK++LS ++ LP EKL +V II+ R SL + +EIE+D +++ TL EL
Sbjct: 572 KPMTYDEKRQLSLDINKLPGEKLGRVVHIIQSREPSLRDSNPEEIEIDFETLKPSTLREL 631
Query: 609 DRFVTNYKKSLSKNKRK 625
+R+V + L K RK
Sbjct: 632 ERYVLS---CLRKKPRK 645
>gi|197304453|dbj|BAG69393.1| bromodomain-containing protein 2 precursor [Gallus gallus]
Length = 733
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/113 (43%), Positives = 64/113 (56%), Gaps = 3/113 (2%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G S+ K C+ +L++L+ KH W F PVD LGLHDY II+HPMDL T+K ++
Sbjct: 295 GKLSEQLKYCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHEIIKHPMDLSTIKRKM 354
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
Y +EFA DVRL F N YNP DV MA +L +FE + + E
Sbjct: 355 ENRDYHDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFSYAKMPDE 407
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 51/91 (56%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD LGL DY II+ PMD+GT+K RL N+Y E +D
Sbjct: 39 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWGAAECMQDF 98
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN D+ +MA+ L KIF K
Sbjct: 99 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 129
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 49/77 (63%), Gaps = 4/77 (5%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWEL 608
+ MTYDEK++LS ++ LP EKL +V II+ R SL + +EIE+D +++ TL EL
Sbjct: 572 KPMTYDEKRQLSLDINKLPGEKLGRVVHIIQSREPSLRDSNPEEIEIDFETLKPSTLREL 631
Query: 609 DRFVTNYKKSLSKNKRK 625
+R+V + L K RK
Sbjct: 632 ERYVLS---CLRKKPRK 645
>gi|148356975|dbj|BAF62999.1| Bromodomain-containing protein 2 precursor [Gallus gallus]
gi|197304348|dbj|BAG69295.1| bromodomain-containing protein 2 precursor [Gallus gallus]
gi|197304378|dbj|BAG69323.1| bromodomain-containing protein 2 precursor [Gallus gallus]
gi|197304408|dbj|BAG69351.1| bromodomain-containing protein 2 precursor [Gallus gallus]
gi|197304468|dbj|BAG69407.1| bromodomain-containing protein 2 precursor [Gallus gallus]
gi|197304482|dbj|BAG69420.1| bromodomain-containing protein 2 precursor [Gallus gallus]
gi|197304512|dbj|BAG69448.1| bromodomain-containing protein 2 precursor [Gallus gallus]
gi|197304526|dbj|BAG69461.1| bromodomain-containing protein 2 precursor [Gallus gallus]
gi|261863985|gb|ACY01481.1| bromodomain-containing protein 2 precursor [Gallus gallus]
gi|261863995|gb|ACY01490.1| bromodomain-containing protein 2 precursor [Gallus gallus]
Length = 733
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/113 (43%), Positives = 64/113 (56%), Gaps = 3/113 (2%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G S+ K C+ +L++L+ KH W F PVD LGLHDY II+HPMDL T+K ++
Sbjct: 295 GKLSEQLKYCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHEIIKHPMDLSTIKRKM 354
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
Y +EFA DVRL F N YNP DV MA +L +FE + + E
Sbjct: 355 ENRDYHDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFSYAKMPDE 407
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 51/91 (56%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD LGL DY II+ PMD+GT+K RL N+Y E +D
Sbjct: 39 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWGAAECMQDF 98
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN D+ +MA+ L KIF K
Sbjct: 99 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 129
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 49/77 (63%), Gaps = 4/77 (5%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWEL 608
+ MTYDEK++LS ++ LP EKL +V II+ R SL + +EIE+D +++ TL EL
Sbjct: 572 KPMTYDEKRQLSLDINKLPGEKLGRVVHIIQSREPSLRDSNPEEIEIDFETLKPSTLREL 631
Query: 609 DRFVTNYKKSLSKNKRK 625
+R+V + L K RK
Sbjct: 632 ERYVLS---CLRKKPRK 645
>gi|133777453|gb|AAI14644.1| BRD2 protein [Bos taurus]
Length = 558
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 66/113 (58%), Gaps = 3/113 (2%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G S+ K C+ +L++L+ KH W F PVD LGLHDY II+HPMDL TVK ++
Sbjct: 344 GKLSEQLKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKM 403
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
Y+ +EFA DVRL F N YNP DV MA +L +FE ++ + E
Sbjct: 404 ENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDE 456
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 52/91 (57%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD LGL DY II+ PMD+GT+K RL N+Y + E +D
Sbjct: 86 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDF 145
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN D+ +MA+ L KIF K
Sbjct: 146 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 176
>gi|55725298|emb|CAH89514.1| hypothetical protein [Pongo abelii]
Length = 546
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 66/113 (58%), Gaps = 3/113 (2%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G S+ K C+ +L++L+ KH W F PVD LGLHDY II+HPMDL TVK ++
Sbjct: 344 GKLSEQLKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKM 403
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
Y+ +EFA DVRL F N YNP DV MA +L +FE ++ + E
Sbjct: 404 ENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDE 456
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 54/98 (55%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD LGL DY II+ PMD+GT+K RL N+Y + E +D
Sbjct: 86 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDF 145
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
F N YN D+ +MA+ L KIF K + E
Sbjct: 146 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQE 183
>gi|47212213|emb|CAF94980.1| unnamed protein product [Tetraodon nigroviridis]
Length = 642
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/107 (42%), Positives = 64/107 (59%), Gaps = 3/107 (2%)
Query: 372 FKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
K C A+L++++ KH W F PVD + L LHDY II+HPMDL T++ +++K Y
Sbjct: 287 MKHCDAILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTIRKKMDKGEYS 346
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
P+ FA DVRL F N YNP +V MA +L +FE ++ I E
Sbjct: 347 EPQSFATDVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKIPDE 393
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 51/91 (56%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD L L DY +I++PMD+GT+K RL N+Y S +D
Sbjct: 27 VVKTLWKHQFAWPFYQPVDAIKLCLADYHKVIKNPMDMGTIKKRLENNYYWSASGAMQDF 86
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN D+ +MA+ L KIF K
Sbjct: 87 NTMFTNCYIYNKPTDDIVLMAQALEKIFLQK 117
>gi|224013522|ref|XP_002296425.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220968777|gb|EED87121.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 1718
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 69/113 (61%)
Query: 369 SKIFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
+K+ C +L +L H+HGWVF PVD LGL DYF +I+ PMDLGT+ RL+ Y
Sbjct: 829 AKLKLKCVEILRELQIHEHGWVFATPVDPVELGLDDYFDVIKKPMDLGTISRRLDNGSYH 888
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMR 481
+ +F DVRLTF NAM YN + VH MA++L K F+ + + + +E R
Sbjct: 889 AFDDFKSDVRLTFENAMKYNDENSVVHEMAKELKKKFDTDYKKLMKQLEKEHR 941
>gi|7512236|pir||T28145 RING3 kinase - chicken
gi|3129967|emb|CAA18965.1| RING3 kinase [synthetic construct]
gi|197304363|dbj|BAG69309.1| bromodomain-containing protein 2 precursor [Gallus gallus]
gi|197304393|dbj|BAG69337.1| bromodomain-containing protein 2 precursor [Gallus gallus]
gi|197304423|dbj|BAG69365.1| bromodomain-containing protein 2 precursor [Gallus gallus]
gi|197304438|dbj|BAG69379.1| bromodomain-containing protein 2 precursor [Gallus gallus]
gi|197304497|dbj|BAG69434.1| bromodomain-containing protein 2 precursor [Gallus gallus]
Length = 733
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/113 (43%), Positives = 64/113 (56%), Gaps = 3/113 (2%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G S+ K C+ +L++L+ KH W F PVD LGLHDY II+HPMDL T+K ++
Sbjct: 295 GKLSEQLKYCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHEIIKHPMDLSTIKRKM 354
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
Y +EFA DVRL F N YNP DV MA +L +FE + + E
Sbjct: 355 ENRDYHDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFSYAKMPDE 407
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 51/91 (56%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD LGL DY II+ PMD+GT+K RL N+Y E +D
Sbjct: 39 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWGAAECMQDF 98
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN D+ +MA+ L KIF K
Sbjct: 99 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 129
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 49/77 (63%), Gaps = 4/77 (5%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWEL 608
+ MTYDEK++LS ++ LP EKL +V II+ R SL + +EIE+D +++ TL EL
Sbjct: 572 KPMTYDEKRQLSLDINKLPGEKLGRVVHIIQSREPSLRDSNPEEIEIDFETLKPSTLREL 631
Query: 609 DRFVTNYKKSLSKNKRK 625
+R+V + L K RK
Sbjct: 632 ERYVLS---CLRKKPRK 645
>gi|169730373|gb|ACA64774.1| bromodomain-containing protein 2 [Meleagris gallopavo]
Length = 779
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/113 (43%), Positives = 64/113 (56%), Gaps = 3/113 (2%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G S+ K C+ +L++L+ KH W F PVD LGLHDY II+HPMDL T+K ++
Sbjct: 341 GKLSEQLKYCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHEIIKHPMDLSTIKRKM 400
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
Y +EFA DVRL F N YNP DV MA +L +FE + + E
Sbjct: 401 ENRDYHDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFSYAKMPDE 453
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 51/91 (56%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD LGL DY II+ PMD+GT+K RL N+Y E +D
Sbjct: 85 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWGAAECMQDF 144
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN D+ +MA+ L KIF K
Sbjct: 145 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 175
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 49/77 (63%), Gaps = 4/77 (5%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWEL 608
+ MTYDEK++LS ++ LP EKL +V II+ R SL + +EIE+D +++ TL EL
Sbjct: 618 KPMTYDEKRQLSLDINKLPGEKLGRVVHIIQSREPSLRDSNPEEIEIDFETLKPSTLREL 677
Query: 609 DRFVTNYKKSLSKNKRK 625
+R+V + L K RK
Sbjct: 678 ERYVLS---CLRKKPRK 691
>gi|34392374|dbj|BAC82511.1| Serine threonine Kinase [Coturnix japonica]
Length = 735
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/113 (43%), Positives = 64/113 (56%), Gaps = 3/113 (2%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G S+ K C+ +L++L+ KH W F PVD LGLHDY II+HPMDL T+K ++
Sbjct: 295 GKLSEQLKYCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHEIIKHPMDLSTIKRKM 354
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
Y +EFA DVRL F N YNP DV MA +L +FE + + E
Sbjct: 355 ENRDYHDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFSYAKMPDE 407
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 51/91 (56%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD LGL DY II+ PMD+GT+K RL N+Y E +D
Sbjct: 39 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWGAAECMQDF 98
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN D+ +MA+ L KIF K
Sbjct: 99 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 129
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 49/77 (63%), Gaps = 4/77 (5%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWEL 608
+ MTYDEK++LS ++ LP EKL +V II+ R SL + +EIE+D +++ TL EL
Sbjct: 574 KPMTYDEKRQLSLDINKLPGEKLGRVVHIIQSREPSLRDSNPEEIEIDFETLKPSTLREL 633
Query: 609 DRFVTNYKKSLSKNKRK 625
+R+V + L K RK
Sbjct: 634 ERYVLS---CLRKKPRK 647
>gi|384254936|gb|AFH75302.1| BRD2 [Lyrurus tetrix]
Length = 779
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/113 (43%), Positives = 64/113 (56%), Gaps = 3/113 (2%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G S+ K C+ +L++L+ KH W F PVD LGLHDY II+HPMDL T+K ++
Sbjct: 341 GKLSEQLKYCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHEIIKHPMDLSTIKRKM 400
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
Y +EFA DVRL F N YNP DV MA +L +FE + + E
Sbjct: 401 ENRDYHDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFSYAKMPDE 453
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 51/91 (56%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD LGL DY II+ PMD+GT+K RL N+Y E +D
Sbjct: 85 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWGAAECMQDF 144
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN D+ +MA+ L KIF K
Sbjct: 145 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 175
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 49/77 (63%), Gaps = 4/77 (5%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWEL 608
+ MTYDEK++LS ++ LP EKL +V II+ R SL + +EIE+D +++ TL EL
Sbjct: 618 KPMTYDEKRQLSLDINKLPGEKLGRVVHIIQSREPSLRDSNPEEIEIDFETLKPSTLREL 677
Query: 609 DRFVTNYKKSLSKNKRK 625
+R+V + L K RK
Sbjct: 678 ERYVLS---CLRKKPRK 691
>gi|197304540|dbj|BAG69474.1| bromodomain-containing protein 2 precursor [Gallus gallus]
Length = 733
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/113 (43%), Positives = 64/113 (56%), Gaps = 3/113 (2%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G S+ K C+ +L++L+ KH W F PVD LGLHDY II+HPMDL T+K ++
Sbjct: 295 GKLSEQLKYCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHEIIKHPMDLSTIKRKM 354
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
Y +EFA DVRL F N YNP DV MA +L +FE + + E
Sbjct: 355 ENRDYHDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFSYAKMPDE 407
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 51/91 (56%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD LGL DY II+ PMD+GT+K RL N+Y E +D
Sbjct: 39 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKLPMDMGTIKRRLENNYYWGAAECMQDF 98
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN D+ +MA+ L KIF K
Sbjct: 99 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 129
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 49/77 (63%), Gaps = 4/77 (5%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWEL 608
+ MTYDEK++LS ++ LP EKL +V II+ R SL + +EIE+D +++ TL EL
Sbjct: 572 KPMTYDEKRQLSLDINKLPGEKLGRVVHIIQSREPSLRDSNPEEIEIDFETLKPSTLREL 631
Query: 609 DRFVTNYKKSLSKNKRK 625
+R+V + L K RK
Sbjct: 632 ERYVLS---CLRKKPRK 645
>gi|12802525|gb|AAK07919.1|AF318183_1 ring 3 [Mus musculus]
Length = 503
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 66/113 (58%), Gaps = 3/113 (2%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G S+ K C+ +L++L+ KH W F PVD LGLHDY II+HPMDL TVK ++
Sbjct: 343 GKLSEQLKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKM 402
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
Y+ +EFA DVRL F N YNP DV MA +L +FE ++ + E
Sbjct: 403 ENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDE 455
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 52/91 (57%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD LGL DY II+ PMD+GT+K RL N+Y + E +D
Sbjct: 85 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDF 144
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN D+ +MA+ L KIF K
Sbjct: 145 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 175
>gi|395146456|gb|AFN53616.1| BRD2 [Chrysolophus pictus]
Length = 733
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/113 (43%), Positives = 64/113 (56%), Gaps = 3/113 (2%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G S+ K C+ +L++L+ KH W F PVD LGLHDY II+HPMDL T+K ++
Sbjct: 295 GKLSEQLKYCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHEIIKHPMDLSTIKRKM 354
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
Y +EFA DVRL F N YNP DV MA +L +FE + + E
Sbjct: 355 ENRDYHDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFSYAKMPDE 407
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 51/91 (56%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD LGL DY II+ PMD+GT+K RL N+Y E +D
Sbjct: 39 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWGAAECMQDF 98
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN D+ +MA+ L KIF K
Sbjct: 99 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 129
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 49/77 (63%), Gaps = 4/77 (5%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWEL 608
+ MTYDEK++LS ++ LP EKL +V II+ R SL + +EIE+D +++ TL EL
Sbjct: 572 KPMTYDEKRQLSLDINKLPGEKLGRVVHIIQSREPSLRDSNPEEIEIDFETLKPSTLREL 631
Query: 609 DRFVTNYKKSLSKNKRK 625
+R+V + L K RK
Sbjct: 632 ERYVLS---CLRKKPRK 645
>gi|321456065|gb|EFX67182.1| hypothetical protein DAPPUDRAFT_302185 [Daphnia pulex]
Length = 754
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/103 (46%), Positives = 63/103 (61%), Gaps = 3/103 (2%)
Query: 373 KSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKS 429
K+C+ +L++L KH W F PVD LGLHDY II+ PMDLGTVK +++ Y+S
Sbjct: 354 KACNEILKELFSKKHSGYAWPFYKPVDAGLLGLHDYHDIIKKPMDLGTVKAKMDGREYRS 413
Query: 430 PKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVI 472
EFA DVR+ F N YNP DV MA +L +FE ++ I
Sbjct: 414 AAEFASDVRMIFTNCYKYNPPDHDVVAMARKLQDVFEMRYAKI 456
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/88 (50%), Positives = 57/88 (64%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ + KH W F+ PVD K LGL DYF II++PMDLGTVK RL N+Y S KE +D
Sbjct: 88 VMKAVWKHSFAWPFHQPVDAKKLGLPDYFKIIKYPMDLGTVKKRLENNYYWSAKECIQDF 147
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIF 465
F N YN G+DV +MA+ L K+F
Sbjct: 148 NTMFTNCYVYNKPGEDVVLMAQTLEKLF 175
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWELDR 610
M+YDEK++LS ++ LP +KL +V II+ R SL + DEIE+D +++ TL EL+
Sbjct: 594 MSYDEKRQLSLDINKLPGDKLGRVVHIIQSREPSLRDSNPDEIEIDFETLKPSTLRELES 653
Query: 611 FVTN 614
+V +
Sbjct: 654 YVAS 657
>gi|123233748|emb|CAM17899.1| bromodomain containing 2 [Mus musculus]
Length = 473
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 66/113 (58%), Gaps = 3/113 (2%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G S+ K C+ +L++L+ KH W F PVD LGLHDY II+HPMDL TVK ++
Sbjct: 343 GKLSEQLKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKM 402
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
Y+ +EFA DVRL F N YNP DV MA +L +FE ++ + E
Sbjct: 403 ENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDE 455
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 52/91 (57%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD LGL DY II+ PMD+GT+K RL N+Y + E +D
Sbjct: 85 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDF 144
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN D+ +MA+ L KIF K
Sbjct: 145 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 175
>gi|356565711|ref|XP_003551081.1| PREDICTED: uncharacterized protein LOC100797746 [Glycine max]
Length = 738
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 64/103 (62%), Gaps = 3/103 (2%)
Query: 371 IFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL---NKNWY 427
+ + +L ++ +HK W F PVD++ LGLHDY+ +I PMD T+K ++ + Y
Sbjct: 469 LMRQFGTILRQITQHKWAWPFMQPVDIEGLGLHDYYEVIDKPMDFSTIKNQMEAKDGTGY 528
Query: 428 KSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWV 470
K +E DVRL F NAM YN + DVH+MA+ LL FE+KW+
Sbjct: 529 KHVREICADVRLVFKNAMKYNDERSDVHVMAKTLLSKFEEKWL 571
Score = 43.1 bits (100), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 12/93 (12%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWELD 609
R M+ +EK+KL L L E L ++I+ + N S +E+++D+D+ TLW L
Sbjct: 633 RKMSTEEKRKLGDALTRLSPEDLSKALEIVAQNNPSFQATAEEVDLDMDAQSESTLWRLK 692
Query: 610 RFVTNYKKSLSK------------NKRKAELAN 630
FV + K NKRK EL +
Sbjct: 693 FFVKEALEVQGKNSGSMGGNENQNNKRKRELCD 725
>gi|74190894|dbj|BAE28228.1| unnamed protein product [Mus musculus]
Length = 473
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 66/113 (58%), Gaps = 3/113 (2%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G S+ K C+ +L++L+ KH W F PVD LGLHDY II+HPMDL TVK ++
Sbjct: 343 GKLSEQLKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKM 402
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
Y+ +EFA DVRL F N YNP DV MA +L +FE ++ + E
Sbjct: 403 ENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDE 455
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 52/91 (57%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD LGL DY II+ PMD+GT+K RL N+Y + E +D
Sbjct: 85 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDF 144
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN D+ +MA+ L KIF K
Sbjct: 145 NTMFTNCYIYNKPTDDIVLMAQTLKKIFLQK 175
>gi|19171509|emb|CAC84085.1| hypothetical protein [Takifugu rubripes]
Length = 701
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 46/107 (42%), Positives = 64/107 (59%), Gaps = 3/107 (2%)
Query: 372 FKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
K C A+L++++ KH W F PVD + L LHDY II+HPMDL T++ +++K Y
Sbjct: 297 MKHCDAILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTIRKKMDKGEYN 356
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
P+ FA DVRL F N YNP +V MA +L +FE ++ I E
Sbjct: 357 EPQSFATDVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKIPDE 403
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 52/91 (57%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD L L DY +I++PMD+GT+K RL N+Y S E +D
Sbjct: 43 VVKTLWKHQFAWPFYQPVDAIKLCLADYHKVIKNPMDMGTIKKRLENNYYWSASEAMQDF 102
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN D+ +MA+ L KIF K
Sbjct: 103 NTMFTNCYIYNKPTDDIVLMAQALEKIFLQK 133
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 49/75 (65%), Gaps = 4/75 (5%)
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWELDR 610
M+YDEK++LS ++ LP EKL +V II+ R SL + DEIE+D +++ TL EL+R
Sbjct: 551 MSYDEKRQLSLDINRLPGEKLGRVVHIIQTREPSLRDSNPDEIEIDFETLKPSTLRELER 610
Query: 611 FVTNYKKSLSKNKRK 625
+V K L K +RK
Sbjct: 611 YV---KSCLQKKQRK 622
>gi|443611854|gb|AGC96178.1| bromodomain-containing protein 2 [Tympanuchus cupido]
Length = 779
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 49/113 (43%), Positives = 64/113 (56%), Gaps = 3/113 (2%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G S+ K C+ +L++L+ KH W F PVD LGLHDY II+HPMDL T+K ++
Sbjct: 341 GKLSEQLKYCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHEIIKHPMDLSTIKRKM 400
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
Y +EFA DVRL F N YNP DV MA +L +FE + + E
Sbjct: 401 ENRDYHDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFSYAKMPDE 453
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 51/91 (56%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD LGL DY II+ PMD+GT+K RL N+Y E +D
Sbjct: 85 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWGAAECMQDF 144
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN D+ +MA+ L KIF K
Sbjct: 145 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 175
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 49/77 (63%), Gaps = 4/77 (5%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWEL 608
+ MTYDEK++LS ++ LP EKL +V II+ R SL + +EIE+D +++ TL EL
Sbjct: 618 KPMTYDEKRQLSLDINKLPGEKLGRVVHIIQSREPSLRDSNPEEIEIDFETLKPSTLREL 677
Query: 609 DRFVTNYKKSLSKNKRK 625
+R+V + L K RK
Sbjct: 678 ERYVLS---CLRKKPRK 691
>gi|325193402|emb|CCA27731.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 2004
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/103 (46%), Positives = 61/103 (59%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
LL KLM+ +HGW FN+PVD + DYF II+ PMDLG +K RL Y S FA DV
Sbjct: 732 LLTKLMESEHGWAFNSPVDPVQWNIPDYFDIIKCPMDLGAIKKRLENEHYNSVDAFAADV 791
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREM 480
RL F N + YN +I A+QLL FE I+S+ R++
Sbjct: 792 RLVFENCIAYNSSTNKFNIAAKQLLTQFEKNLTSIKSQLERQL 834
>gi|27696271|gb|AAH43784.1| Brd2-A-prov protein, partial [Xenopus laevis]
Length = 539
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/113 (41%), Positives = 67/113 (59%), Gaps = 3/113 (2%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G S+ K C+ +L++L+ KH W F PVDV LGLHDY+ II+HPMD+ T+K ++
Sbjct: 338 GKLSEQLKYCNGILKELLSKKHAAYAWPFYKPVDVSALGLHDYYDIIKHPMDMSTIKKKM 397
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
+ +K +EFA +RL F N YNP DV MA +L +FE + + E
Sbjct: 398 DSREFKDAQEFAAAIRLMFSNCYKYNPPDHDVVAMARKLQDVFEFSYAKMPDE 450
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 53/92 (57%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
A+++ L KH+ W F PVD LGL DY II+ PMD+GTVK RL N+Y S E +D
Sbjct: 85 AVVKSLWKHQFSWPFRQPVDAVKLGLPDYHKIIKQPMDMGTVKKRLENNYYWSALECMQD 144
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN D+ +MA+ L K+F K
Sbjct: 145 FNTMFTNCYIYNKPTDDIVLMAQSLEKMFLQK 176
>gi|161611729|gb|AAI55902.1| Brd2-a protein [Xenopus laevis]
Length = 517
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/113 (41%), Positives = 67/113 (59%), Gaps = 3/113 (2%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G S+ K C+ +L++L+ KH W F PVDV LGLHDY+ II+HPMD+ T+K ++
Sbjct: 318 GKLSEQLKYCNGILKELLSKKHAAYAWPFYKPVDVSALGLHDYYDIIKHPMDMSTIKKKM 377
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
+ +K +EFA +RL F N YNP DV MA +L +FE + + E
Sbjct: 378 DSREFKDAQEFAAAIRLMFSNCYKYNPPDHDVVAMARKLQDVFEFSYAKMPDE 430
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 53/92 (57%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
A+++ L KH+ W F PVD LGL DY II+ PMD+GTVK RL N+Y S E +D
Sbjct: 65 AVVKSLWKHQFSWPFRQPVDAVKLGLPDYHKIIKQPMDMGTVKKRLENNYYWSALECMQD 124
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN D+ +MA+ L K+F K
Sbjct: 125 FNTMFTNCYIYNKPTDDIVLMAQSLEKMFLQK 156
>gi|120577456|gb|AAI30180.1| Brd2-a protein [Xenopus laevis]
Length = 518
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/113 (41%), Positives = 67/113 (59%), Gaps = 3/113 (2%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G S+ K C+ +L++L+ KH W F PVDV LGLHDY+ II+HPMD+ T+K ++
Sbjct: 318 GKLSEQLKYCNGILKELLSKKHAAYAWPFYKPVDVSALGLHDYYDIIKHPMDMSTIKKKM 377
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
+ +K +EFA +RL F N YNP DV MA +L +FE + + E
Sbjct: 378 DSREFKDAQEFAAAIRLMFSNCYKYNPPDHDVVAMARKLQDVFEFSYAKMPDE 430
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 53/92 (57%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
A+++ L KH+ W F PVD LGL DY II+ PMD+GTVK RL N+Y S E +D
Sbjct: 65 AVVKSLWKHQFSWPFRQPVDAVKLGLPDYHKIIKQPMDMGTVKKRLENNYYWSALECMQD 124
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN D+ +MA+ L K+F K
Sbjct: 125 FNTMFTNCYIYNKPTDDIVLMAQSLEKMFLQK 156
>gi|54311476|gb|AAH84758.1| Brd2-A-prov protein, partial [Xenopus laevis]
Length = 525
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/113 (41%), Positives = 67/113 (59%), Gaps = 3/113 (2%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G S+ K C+ +L++L+ KH W F PVDV LGLHDY+ II+HPMD+ T+K ++
Sbjct: 318 GKLSEQLKYCNGILKELLSKKHAAYAWPFYKPVDVSALGLHDYYDIIKHPMDMSTIKKKM 377
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
+ +K +EFA +RL F N YNP DV MA +L +FE + + E
Sbjct: 378 DSREFKDAQEFAAAIRLMFSNCYKYNPPDHDVVAMARKLQDVFEFSYAKMPDE 430
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 53/92 (57%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
A+++ L KH+ W F PVD LGL DY II+ PMD+GTVK RL N+Y S E +D
Sbjct: 65 AVVKSLWKHQFSWPFRQPVDAVKLGLPDYHKIIKQPMDMGTVKKRLENNYYWSALECMQD 124
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN D+ +MA+ L K+F K
Sbjct: 125 FNTMFTNCYIYNKPTDDIVLMAQSLEKMFLQK 156
>gi|76780317|gb|AAI06310.1| Brd2-A-prov protein, partial [Xenopus laevis]
Length = 517
Score = 103 bits (257), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 47/113 (41%), Positives = 67/113 (59%), Gaps = 3/113 (2%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G S+ K C+ +L++L+ KH W F PVDV LGLHDY+ II+HPMD+ T+K ++
Sbjct: 318 GKLSEQLKYCNGILKELLSKKHAAYAWPFYKPVDVSALGLHDYYDIIKHPMDMSTIKKKM 377
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
+ +K +EFA +RL F N YNP DV MA +L +FE + + E
Sbjct: 378 DSREFKDAQEFAAAIRLMFSNCYKYNPPDHDVVAMARKLQDVFEFSYAKMPDE 430
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 53/92 (57%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
A+++ L KH+ W F PVD LGL DY II+ PMD+GTVK RL N+Y S E +D
Sbjct: 65 AVVKSLWKHQFSWPFRQPVDAVKLGLPDYHKIIKQPMDMGTVKKRLENNYYWSALECMQD 124
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN D+ +MA+ L K+F K
Sbjct: 125 FNTMFTNCYIYNKPTDDIVLMAQSLEKMFLQK 156
>gi|326495086|dbj|BAJ85639.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 269
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 117/245 (47%), Gaps = 23/245 (9%)
Query: 371 IFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL---NKNWY 427
+ + + ++ ++ H+ F PVDV L L DY II PMD T++ ++ + Y
Sbjct: 4 LMRQLAGIIRQITSHEWSAPFLQPVDVVGLQLDDYHKIITKPMDFSTIQNKMEGKDGTKY 63
Query: 428 KSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYE 487
KS +E DVRL F+NAMTYN + DVHIMA+ LL FE+KW+ + + E R +
Sbjct: 64 KSVREIYSDVRLIFNNAMTYNDEHHDVHIMAKLLLDKFEEKWLQLLPKVENEERKHVEPN 123
Query: 488 MGFHTPTSRKAPPLPPPLDMRRILDRSESITHPMDSRLKPISTTPSSRTPAPKKPKAKDP 547
T TS P + ++ ++ + ++ +L+ + R
Sbjct: 124 DAPTTDTS-------PEDAIAKLAKDTDDELNEINRQLEELRNMVVQRC----------- 165
Query: 548 HKRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWE 607
+ MT DEK+KL L L E L ++++ + N +E+ +D+D+ TLW
Sbjct: 166 --KKMTTDEKRKLGAGLCHLTPEDLSKALELVAQDNPDFQTTAEEVHLDMDAQSETTLWR 223
Query: 608 LDRFV 612
L FV
Sbjct: 224 LKFFV 228
>gi|291398522|ref|XP_002715912.1| PREDICTED: Bromodomain testis-specific protein-like [Oryctolagus
cuniculus]
Length = 953
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 64/104 (61%), Gaps = 3/104 (2%)
Query: 372 FKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
+ CS +L++++ KH W F PVDV LGLH+Y+ I+++PMDLGT+K +++ + YK
Sbjct: 270 LRHCSEILKEMLAKKHLPYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKGKMDSHQYK 329
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVI 472
EFA DVRL F N YNP +V MA L +FE + I
Sbjct: 330 DACEFAADVRLMFMNCYKYNPPDHEVVTMARTLQDVFEMHFARI 373
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 50/92 (54%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
+L+ L KH W F PVD L L DY+TII+ PMDL T+K RL +Y E ED
Sbjct: 37 VVLKALWKHSFSWPFQQPVDAVKLKLPDYYTIIKSPMDLNTIKKRLENKYYVKASECIED 96
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN G D+ +MA+ L K+F K
Sbjct: 97 FNTMFSNCYLYNKPGDDIVLMAQTLEKLFMQK 128
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 56/95 (58%), Gaps = 14/95 (14%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWEL 608
+ M YDEK++LS ++ LP +KL +V II+ R SL + DEIE+D +++ A TL EL
Sbjct: 505 KPMNYDEKRQLSLDINKLPGDKLGRVVHIIQSREPSLSDSNPDEIEIDFETLKASTLREL 564
Query: 609 DRFV----------TNYKKSLSKNKRKAELANQAR 633
+++V +N KK++ K K EL Q R
Sbjct: 565 EKYVAACLRKRPLKSNAKKTM---KSKEELHLQKR 596
>gi|395530391|ref|XP_003767279.1| PREDICTED: bromodomain testis-specific protein [Sarcophilus
harrisii]
Length = 840
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 66/115 (57%), Gaps = 3/115 (2%)
Query: 372 FKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
K C+ +L+++ KH W F PVDV LGLH+Y+ ++++PMDLGT+K +++ YK
Sbjct: 213 LKYCNEILKEMFAKKHVAYAWPFYKPVDVTALGLHNYYDVVKNPMDLGTIKKKMDNQEYK 272
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIG 483
EFA DVRL F N YNP +V MA L +FE ++ I E M I
Sbjct: 273 DAHEFAADVRLMFMNCYKYNPPDHEVVAMARTLQDVFEMQFAKIPDEPIERMPIC 327
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 40/67 (59%)
Query: 402 LHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQL 461
+ DY++II+ PMDL T+K RL +Y E ED++ F N YN G D+ +MA+ L
Sbjct: 1 MMDYYSIIKKPMDLSTIKKRLEHKYYVKSSECIEDLKTMFANCYLYNKPGDDIVLMAQAL 60
Query: 462 LKIFEDK 468
K+F K
Sbjct: 61 EKLFTQK 67
Score = 43.5 bits (101), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 44/80 (55%), Gaps = 14/80 (17%)
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAE-----TL 605
M YDEK++LS ++ LP +KL +V II+ R SL + DEIE+D E TL
Sbjct: 452 MNYDEKRQLSLDINKLPGDKLGRVVHIIESREPSLRNSNPDEIEID-----FETLKASTL 506
Query: 606 WELDRFVTNYKKSLSKNKRK 625
EL+++V L K RK
Sbjct: 507 RELEKYVMA---CLRKRPRK 523
>gi|355673420|gb|AER95166.1| bromodomain containing 2 [Mustela putorius furo]
Length = 613
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 49/113 (43%), Positives = 65/113 (57%), Gaps = 3/113 (2%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G S+ K C+ +L++L+ KH W F PVD LGLHDY II+HPMDL TV ++
Sbjct: 352 GKLSEQLKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVXRKM 411
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
Y+ +EFA DVRL F N YNP DV MA +L +FE ++ + E
Sbjct: 412 ENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDE 464
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 54/98 (55%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD LGL DY II+ PMD+GT+K RL N+Y + E +D
Sbjct: 94 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDF 153
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
F N YN D+ +MA+ L KIF K + E
Sbjct: 154 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQE 191
>gi|297819940|ref|XP_002877853.1| hypothetical protein ARALYDRAFT_485593 [Arabidopsis lyrata subsp.
lyrata]
gi|297323691|gb|EFH54112.1| hypothetical protein ARALYDRAFT_485593 [Arabidopsis lyrata subsp.
lyrata]
Length = 371
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 115/247 (46%), Gaps = 21/247 (8%)
Query: 371 IFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL---NKNWY 427
+ + + ++ +HK W F PV+V+ LGLHDYF +I PMD T+K ++ + Y
Sbjct: 96 LMRQFGTIFRQITQHKCAWPFMHPVNVEGLGLHDYFEVIDKPMDFSTIKNQMEAKDGTGY 155
Query: 428 KSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYE 487
K + D+RL F NAM YN + DV+ MA++LL+ FE+KW + + +++
Sbjct: 156 KHVLQVYADMRLVFENAMNYNEETSDVYSMAKKLLEKFEEKW----AHFLPKVQEEEKIR 211
Query: 488 MGFHTPTSRKAPPLPPPLDMRRILDRSESITHPMDSRLKPISTTPSSRTPAPKKPKAKDP 547
+ +A ++ D I H D L+ + R
Sbjct: 212 EEEEKQAATEALLAKEASHIKTTRDLGNEICHANDE-LEKLMRKVVERC----------- 259
Query: 548 HKRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWE 607
R +T +EK+ + L L + L ++ I+ + + S +E+ +++D +D TLW
Sbjct: 260 --RKITIEEKRNIGLALLKLSPDDLQKVLGIVAQADPSFQPRAEEVSIEMDILDEPTLWR 317
Query: 608 LDRFVTN 614
L FV +
Sbjct: 318 LKFFVKD 324
>gi|268564300|ref|XP_002639068.1| C. briggsae CBR-TAG-332 protein [Caenorhabditis briggsae]
Length = 747
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 58/102 (56%), Gaps = 3/102 (2%)
Query: 371 IFKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWY 427
I K C LL + K+ WVF PVD +GLHDY II+HPMD+ T+K +L Y
Sbjct: 252 IMKPCIKLLAEFYNKKYQEFAWVFYEPVDAATMGLHDYHNIIKHPMDMKTIKKKLEAGQY 311
Query: 428 KSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKW 469
K P EF D+RL +N +TYNP G V+ + ++F KW
Sbjct: 312 KEPAEFESDIRLMINNCLTYNPVGDPVNSFGLRFQEVFNKKW 353
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 51/91 (56%)
Query: 376 SALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAE 435
+ +L++ KHKH W F PVD L + Y I PMDL T+++RL +Y S +E +
Sbjct: 49 TVVLKEAAKHKHVWPFQKPVDAHTLCIPLYHERITRPMDLKTIESRLKSVYYTSAQECID 108
Query: 436 DVRLTFHNAMTYNPKGQDVHIMAEQLLKIFE 466
D+ F N +N K DV IMA+ + ++ +
Sbjct: 109 DIEQVFQNCYMFNGKEDDVTIMAQNVHEVIK 139
Score = 46.6 bits (109), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQH----DDEIEVDIDSVDAETLWE 607
++YDEK+ LS + LP + L I+ II +R++S H + EIE+D +S+ L E
Sbjct: 528 LSYDEKRNLSHEVNRLPPQHLSTIIAIITRRDNSALNHQSIDESEIELDFESLGDMCLRE 587
Query: 608 LDRFV 612
+ F+
Sbjct: 588 MSAFM 592
>gi|348513555|ref|XP_003444307.1| PREDICTED: bromodomain-containing protein 2-like [Oreochromis
niloticus]
Length = 810
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 46/110 (41%), Positives = 68/110 (61%), Gaps = 3/110 (2%)
Query: 369 SKIFKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN 425
S+ + C+ +L++L+ +H W F PVD LGLHDY II HPMDL T+K ++++
Sbjct: 262 SEQLRCCNDILKELLSKRHSAYAWPFYVPVDAAALGLHDYHDIITHPMDLSTIKKKMDQR 321
Query: 426 WYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
Y + KEFA DVRL F N YNP +V MA +L ++FE +++ + E
Sbjct: 322 EYGNAKEFAADVRLMFSNCYKYNPPSNEVVHMARKLQEVFEARYLKLPHE 371
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 54/92 (58%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
+L+ L +H++ W F+ PVD L L DY+TII +PMDLGT+K RL ++Y + +D
Sbjct: 38 VVLQALWRHQYSWPFHQPVDAVALCLPDYYTIITNPMDLGTIKKRLKNSYYWQAVDCIDD 97
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN G D+ MA+ L K+F K
Sbjct: 98 FNTMFTNCYVYNQPGDDIVFMAKTLEKLFLQK 129
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 5/85 (5%)
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWELDR 610
MTY EK++L ++ LP +KL +V+II R S L +EIEVD + TL L R
Sbjct: 508 MTYQEKKQLKLDINKLPGDKLGKLVKIIHTRESCLRDSTLEEIEVDFGILKPSTLRALQR 567
Query: 611 FV----TNYKKSLSKNKRKAELANQ 631
FV T K+++KN+ K A Q
Sbjct: 568 FVAECLTKSVKNVTKNRPKPTGAMQ 592
>gi|325187425|emb|CCA21963.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 950
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 81/271 (29%), Positives = 126/271 (46%), Gaps = 33/271 (12%)
Query: 371 IFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSP 430
+ K C +++++LM + F PVD LG+ DYF +I+ PMDLGT++ L +Y
Sbjct: 402 MLKKCHSIIKRLMANSKAGPFLTPVDPVALGIPDYFKVIKEPMDLGTIRQNLESGFYSDA 461
Query: 431 KEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIF------------------------E 466
E VRL F NAM YN VHI A++L+ F E
Sbjct: 462 SILIEHVRLVFSNAMLYNAAHSQVHIFAQKLMDDFGKRIRNANIKYNSPISESGFRPRLE 521
Query: 467 DKWVVIESEYNREMRIGADYEMGFHTPTSRKAPPLPPPL--DMRRILDRSESITHPMDSR 524
D+ +S N+++R G + S L L D+ R+ E + P SR
Sbjct: 522 DRSKTKQS--NKKLRGGKGAKGNSKRRMSCDDQGLINSLREDIERLKATLEQL-QPGTSR 578
Query: 525 -LKPISTTPSSRTPAPKKPKAKDPHKRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKR- 582
P + P+SR P + ++ R M+ E KLS +++ LP K+ ++QII +
Sbjct: 579 NGTPKQSKPTSR-PFKMEDLTEEELNRAMSKWEISKLSADIKLLPQNKISRVLQIISEAV 637
Query: 583 -NSSLFQHDDEIEVDIDSVDAETLWELDRFV 612
++L +DEIE+D +S D L L+ +V
Sbjct: 638 PVANLMNENDEIELDFESFDTRCLRMLEGYV 668
>gi|390352946|ref|XP_003728004.1| PREDICTED: uncharacterized protein LOC100892105 [Strongylocentrotus
purpuratus]
Length = 1350
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 51/119 (42%), Positives = 66/119 (55%), Gaps = 6/119 (5%)
Query: 363 HGFGTGSKI---FKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLG 416
H G K+ K C ++++LM KH W F PVD LGLHDY II+ PMD+G
Sbjct: 348 HQKGKKGKLTAQLKYCYGVIKELMSKKHSAYAWPFFKPVDADVLGLHDYHEIIKTPMDMG 407
Query: 417 TVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
TVK +L YK+ +FA +VRL F N YNP DV MA +L +FE K+ + E
Sbjct: 408 TVKVKLENRDYKNANDFAANVRLIFTNCYKYNPPDHDVVGMARKLQNVFEVKFAKMPDE 466
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 57/98 (58%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F+ PVD L L DYF II+ PMDLGT+K RL +Y S KE D
Sbjct: 47 VMKALWKHQFAWPFHHPVDPTKLALLDYFKIIKTPMDLGTIKKRLESIYYHSAKECISDF 106
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
L F N YN G+DV +MA+ L K+F K + E
Sbjct: 107 NLMFTNCYVYNKPGEDVVLMAQALEKLFLTKVAQMPQE 144
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 53/91 (58%), Gaps = 9/91 (9%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQH-DDEIEVDIDSVDAETLWEL 608
+ M+YDEK++LS ++ LP +KL +V II+ R SL DEIE+D +++ TL EL
Sbjct: 664 KPMSYDEKRQLSLDINKLPGDKLGKVVHIIQSREPSLKDSTPDEIEIDFETLKPSTLREL 723
Query: 609 DRFVTN--------YKKSLSKNKRKAELANQ 631
+++V Y K +K+K+ A+ Q
Sbjct: 724 EKYVMQCLRKRPKAYNKGQTKSKQDAQKEKQ 754
>gi|401840059|gb|EJT42981.1| BDF1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 695
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 132/278 (47%), Gaps = 32/278 (11%)
Query: 372 FKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
K C +L++L+ +H + F PVD ++ L YF ++ PMDLGT+ +LN Y+
Sbjct: 327 MKFCQNILKELVAKRHASYNYPFLEPVDPVSMNLPTYFDYVKEPMDLGTIAKKLNDWEYQ 386
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWV----VIESEYNREMRIGA 484
+ ++F DVRL F N +NP G V++M +L ++F KW + E + + + R
Sbjct: 387 TMEDFERDVRLVFKNCYKFNPDGTIVNMMGHRLEEVFNSKWADRPNLDEYDSDEDSRNQG 446
Query: 485 DYE----------MGFHTPTSRKAPPLPPPLDMRRI----LDRSESITHPMDSRLKPIST 530
DYE + T+ L L ++ L + E + RL S
Sbjct: 447 DYEDYESEYSESDIDETIITNPAIQYLEEQLARMKVELQQLKKQELEKIRKERRLARGSK 506
Query: 531 TPSSRTPAPKKPKAKDPH-KRD--------MTYDEKQKLSTNLQSLPSEKLDNIVQIIKK 581
R+ K+ H +RD +TYD K+ ++ + LP+ KL+ + IIKK
Sbjct: 507 KRGKRSKGRSGSKSASSHGRRDKKNKLKTVVTYDMKRIITERINDLPTSKLERAIDIIKK 566
Query: 582 RNSSLFQHDDEIEVDIDSVDAETLWEL-DRFVTNYKKS 618
++ DDE+E+D+D++D T+ L + F Y+ S
Sbjct: 567 SMPNI-SEDDEVELDLDTLDNHTILTLYNTFFRQYESS 603
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%)
Query: 391 FNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPK 450
F PVD L + YF ++ PMDL T++ +LN Y+ P++ ED L +N++ +N
Sbjct: 182 FLQPVDPVKLDIPFYFNYVKRPMDLSTIERKLNVGAYEFPEQITEDFNLMVNNSIRFNGP 241
Query: 451 GQDVHIMAEQLLKIFE 466
+ MA + FE
Sbjct: 242 NAGISQMARNIQASFE 257
>gi|397567839|gb|EJK45812.1| hypothetical protein THAOC_35556, partial [Thalassiosira oceanica]
Length = 1238
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 46/92 (50%), Positives = 62/92 (67%)
Query: 375 CSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFA 434
CS +L+ L H+HGWVF PV+ LG+ DYF II+ PMDLGT+ +L++ Y S ++F
Sbjct: 740 CSEILKSLQNHEHGWVFATPVNPVELGIDDYFDIIKKPMDLGTIGEKLDQELYHSFEDFR 799
Query: 435 EDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFE 466
DV+LTF NAM YN + VH MA+ L K F+
Sbjct: 800 ADVQLTFENAMKYNEEQTVVHDMAKALKKKFD 831
>gi|405967643|gb|EKC32780.1| Bromodomain testis-specific protein [Crassostrea gigas]
Length = 1173
Score = 102 bits (254), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 44/96 (45%), Positives = 59/96 (61%)
Query: 380 EKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRL 439
E++ + + W F PVD LGLHDY II+ PMDLGT+K ++ YK+ +FAEDVRL
Sbjct: 359 EQVGEKAYAWPFYKPVDADVLGLHDYHDIIKKPMDLGTIKKKMESREYKTAAQFAEDVRL 418
Query: 440 TFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
F N YNP DV +MA +L +FE K+ + E
Sbjct: 419 IFTNCYRYNPTDSDVVVMARKLQDVFEVKYATMPEE 454
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 60/100 (60%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+L+ + +H++ W F+ PVD+K L L DY+ II+ PMDLGT+K RL N+Y S E +D
Sbjct: 85 VLKAVWRHQYAWPFHKPVDIKLLNLPDYYDIIKQPMDLGTIKERLETNFYYSATECIQDF 144
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYN 477
F N YN +D+ +MA+ L K+F K + E N
Sbjct: 145 NQMFTNCYIYNNPKEDIVLMAQVLEKLFLQKVAQMPPESN 184
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 50/77 (64%), Gaps = 4/77 (5%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWEL 608
+ MTYDEK++LS ++ LP +KL +V II+ R SL + DEIE+D +++ TL EL
Sbjct: 629 KPMTYDEKRQLSLDINKLPGDKLGRVVYIIQSREPSLRDSNPDEIEIDFETLKPSTLREL 688
Query: 609 DRFVTNYKKSLSKNKRK 625
+ +V + L KNKRK
Sbjct: 689 ESYVMS---CLKKNKRK 702
>gi|73959570|ref|XP_867048.1| PREDICTED: bromodomain testis-specific protein isoform 3 [Canis
lupus familiaris]
Length = 668
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 46/107 (42%), Positives = 64/107 (59%), Gaps = 3/107 (2%)
Query: 372 FKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
+ CS +L++++ KH W F PVDV LGLH+Y+ I+++PMDLGT+K +++ YK
Sbjct: 273 LRHCSEILKEMLAKKHLSYAWPFYNPVDVHALGLHNYYDIVKNPMDLGTIKGKMDNQEYK 332
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
EFA DVRL F N YNP +V MA L +FE + I E
Sbjct: 333 DAYEFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFEMHFAKIPDE 379
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 51/91 (56%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+L+ L KH W F PVD L L DY+TII+ PMDL T+K RL +Y E ED
Sbjct: 38 VLKALWKHSFSWPFQQPVDAVKLKLPDYYTIIKTPMDLNTIKKRLEHKYYVRASECIEDF 97
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
+ F N YN G D+ +MA+ L K+F K
Sbjct: 98 NIMFSNCYLYNKPGDDIVLMAQALEKLFRQK 128
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 50/73 (68%), Gaps = 2/73 (2%)
Query: 541 KPKAKDPHKRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDS 599
KP+ +D + + M YDEK++LS ++ LP +KL +V II+ R SL + DEIE+D ++
Sbjct: 499 KPEDED-NAKPMNYDEKRQLSLDINKLPGDKLGRVVHIIQSREPSLRNSNPDEIEIDFET 557
Query: 600 VDAETLWELDRFV 612
+ A TL EL+++V
Sbjct: 558 LKASTLRELEKYV 570
>gi|156356469|ref|XP_001623945.1| predicted protein [Nematostella vectensis]
gi|156210690|gb|EDO31845.1| predicted protein [Nematostella vectensis]
Length = 467
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 48/107 (44%), Positives = 60/107 (56%), Gaps = 3/107 (2%)
Query: 372 FKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
K CS +L+ + KH W F PVD + LGLHDY II+ PMD+ +K +L Y
Sbjct: 287 LKYCSTILKDMFSKKHYAYAWPFYKPVDAEALGLHDYHDIIKQPMDMTEIKNKLENRAYD 346
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
SP EFA D+RL F N YNP DV MA QL +FE K+ + E
Sbjct: 347 SPSEFAADIRLMFSNCYRYNPPDHDVVKMARQLQDVFEMKFAKMPEE 393
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/107 (42%), Positives = 62/107 (57%), Gaps = 1/107 (0%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+L+ L +H H W F PVD L L DY TII+ PMDLGT+K +L N Y +E ED
Sbjct: 26 VLKGLWRHHHAWPFREPVDAVKLNLPDYHTIIKKPMDLGTIKKKLENNEYPCAQECIEDF 85
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGA 484
RL +N TYN G D+ +M + + K+F K ++ E +E+ IG
Sbjct: 86 RLMINNCYTYNKPGDDIVLMCQSMDKLFHQKIAMMPPE-EKEIIIGV 131
>gi|327290160|ref|XP_003229792.1| PREDICTED: bromodomain-containing protein 2-like [Anolis
carolinensis]
Length = 794
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 78/152 (51%), Gaps = 17/152 (11%)
Query: 341 PPAESNKKSKLNGKKQAGNEL--------------AHGFGTGSKIFKSCSALLEKLMKHK 386
P AE K +K+ ++++G + G S+ K C+ +L++L+ K
Sbjct: 311 PLAEGGKAAKIPARRESGRPIKPPRKDLPDSQQHQTSKRGKLSEQLKYCNGILKELVSKK 370
Query: 387 HG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHN 443
H W F PVD LGLHDY II++PMDL T+K ++ Y+ +EFA DVRL F N
Sbjct: 371 HAAYAWPFYKPVDASALGLHDYHEIIKYPMDLSTIKRKMENRDYRDAQEFASDVRLMFSN 430
Query: 444 AMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
YNP DV MA +L +FE + + E
Sbjct: 431 CYKYNPPDHDVVAMARKLQDVFEFSYAKMPDE 462
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 52/92 (56%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
+++ L KH+ W F PVD LGL DY II+ PMD+GT+K RL N+Y S E +D
Sbjct: 82 VVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWSSAECMQD 141
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN D+ +MA+ L KIF K
Sbjct: 142 FNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 173
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 52/84 (61%), Gaps = 5/84 (5%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWEL 608
R M+YDEK++LS ++ LP EKL +V II+ R SL + +EIE+D +++ TL EL
Sbjct: 629 RPMSYDEKRQLSLDINKLPGEKLGRVVHIIQSREPSLRDSNPEEIEIDFETLKPSTLREL 688
Query: 609 DRFVTNYKKSLSKNKRKAELANQA 632
+R+V S + K + +++A
Sbjct: 689 ERYVL----SCLRKKPRKPYSSEA 708
>gi|431897072|gb|ELK06336.1| Bromodomain testis-specific protein, partial [Pteropus alecto]
Length = 931
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/113 (41%), Positives = 67/113 (59%), Gaps = 3/113 (2%)
Query: 366 GTGSKIFKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G ++ + CS +L++++ KH W F PVDV LGLH+Y+ I+++PMDLGT+K ++
Sbjct: 274 GKVTEQLRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKRKM 333
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
+ YK EFA DVRL F N YNP +V MA L +FE + I E
Sbjct: 334 DNQEYKDAYEFAADVRLMFVNCYKYNPPDHEVVAMARMLQDVFEMHFAKIPDE 386
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 51/92 (55%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
+L+ L KH W F PVD L L DY+TII+ PMDL T+K RL +Y E ED
Sbjct: 44 VVLKALWKHSFSWPFQQPVDAMKLKLPDYYTIIKKPMDLSTIKKRLEHKYYVQASECIED 103
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
+ F N YN G D+ +MA+ L K+F K
Sbjct: 104 FNMMFSNCYLYNKTGDDIVLMAQALEKLFRQK 135
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 57/91 (62%), Gaps = 1/91 (1%)
Query: 523 SRLKPISTTPSSRTPAPKKPKAKDPHKRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKR 582
++LKP S P P K++D + + M YDEK++LS ++ LP +KL +V II+ R
Sbjct: 485 AKLKPKSNQPKKSIQQPFALKSEDDNVKPMNYDEKRQLSLDINKLPGDKLGRVVHIIQSR 544
Query: 583 NSSLFQHD-DEIEVDIDSVDAETLWELDRFV 612
SL + DEIE+D +++ A TL EL+++V
Sbjct: 545 EPSLRNSNPDEIEIDFETLKATTLRELEKYV 575
>gi|351697075|gb|EHA99993.1| Bromodomain testis-specific protein [Heterocephalus glaber]
Length = 832
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/107 (42%), Positives = 66/107 (61%), Gaps = 3/107 (2%)
Query: 372 FKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
K C+ +L++++ KH W F++PVDV LGLH+Y+ I+++PMDLGT+K +++ YK
Sbjct: 226 LKHCNEILKEMLSKKHFSYAWPFHSPVDVNALGLHNYYDIVKNPMDLGTIKKKMDNQEYK 285
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
EFA DVRL F N YN D+ MA+ L +FE + I E
Sbjct: 286 DAYEFAADVRLMFMNCYKYNSPDHDIVAMAKTLQDVFEVHFAKISDE 332
>gi|426218805|ref|XP_004003627.1| PREDICTED: bromodomain testis-specific protein [Ovis aries]
Length = 969
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/107 (42%), Positives = 63/107 (58%), Gaps = 3/107 (2%)
Query: 372 FKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
+ CS +L++++ KH W F PVDV LGLH+Y+ I++ PMDLGT+K +++ YK
Sbjct: 307 LRHCSEILKEMLGKKHLSYAWPFYNPVDVNALGLHNYYDIVKTPMDLGTIKAKMDNQEYK 366
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
EFA DVRL F N YNP +V MA L +FE + I E
Sbjct: 367 DAYEFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFEVHFAKIPDE 413
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 51/92 (55%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
+L+ L KH W F PVD L L DY+TII++PMDL T+K RL +Y E ED
Sbjct: 72 VVLKALWKHSFSWPFQQPVDAVKLKLPDYYTIIKNPMDLNTIKKRLEHKYYVKASECIED 131
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN G D+ +MA+ L K+F K
Sbjct: 132 FNTMFSNCYLYNKPGDDIVLMAQALEKLFRQK 163
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 54/94 (57%), Gaps = 2/94 (2%)
Query: 521 MDSRLKPISTTPSSRTPAPKKPKAKDP-HKRDMTYDEKQKLSTNLQSLPSEKLDNIVQII 579
M + KP P R P K++D + + M YDEK++LS ++ LP +KL +V II
Sbjct: 512 MKLKEKPKRNLPKKRKPQVFTMKSEDEDNAKPMNYDEKRQLSLDINKLPGDKLGRVVHII 571
Query: 580 KKRNSSLFQHD-DEIEVDIDSVDAETLWELDRFV 612
+ R SL DEIE+D +++ + TL EL ++V
Sbjct: 572 QSREPSLRNSSPDEIEIDFETLKSSTLRELQKYV 605
>gi|410033225|ref|XP_003949509.1| PREDICTED: bromodomain testis-specific protein [Pan troglodytes]
Length = 797
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/107 (42%), Positives = 64/107 (59%), Gaps = 3/107 (2%)
Query: 372 FKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
+ CS +L++++ KH W F PVDV LGLH+Y+ I+++PMDLGT+K +++ YK
Sbjct: 200 LRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMDNQEYK 259
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
+FA DVRL F N YNP +V MA L +FE + I E
Sbjct: 260 DAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKIPIE 306
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWEL 608
+ M YDEK++LS N+ LP +KL +V II+ R SL + DEIE+D +++ A TL EL
Sbjct: 435 KPMNYDEKRQLSLNINKLPGDKLGRVVHIIQSREPSLSNSNPDEIEIDFETLKASTLREL 494
Query: 609 DRFVT 613
+++V+
Sbjct: 495 EKYVS 499
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 29/57 (50%)
Query: 413 MDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKW 469
MDL T+K RL +Y E ED F N YN G D+ +MA+ L K+F K
Sbjct: 1 MDLNTIKKRLENKYYMKASECIEDFNTMFSNCYLYNKPGDDIVLMAQALEKLFMQKL 57
>gi|440906896|gb|ELR57110.1| Bromodomain testis-specific protein [Bos grunniens mutus]
Length = 964
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/107 (42%), Positives = 63/107 (58%), Gaps = 3/107 (2%)
Query: 372 FKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
+ CS +L++++ KH W F PVDV LGLH+Y+ I++ PMDLGT+K +++ YK
Sbjct: 272 LRHCSEILKEMLGKKHLSYAWPFYNPVDVNALGLHNYYDIVKTPMDLGTIKAKMDNQEYK 331
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
EFA DVRL F N YNP +V MA L +FE + I E
Sbjct: 332 DAYEFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFEMHFAKIPDE 378
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 51/92 (55%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
+L+ L KH W F PVD L L DY+TII++PMDL T+K RL +Y E ED
Sbjct: 37 VVLKALWKHSFSWPFQQPVDAVKLKLPDYYTIIKNPMDLNTIKKRLEHKYYVKASECIED 96
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN G D+ +MA+ L K+F K
Sbjct: 97 FNTMFSNCYLYNKPGDDIVLMAQALEKLFRQK 128
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 49/77 (63%), Gaps = 3/77 (3%)
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWELDR 610
M YDEK++LS ++ LP +KL +V II+ R SL + DEIE+D +++ + TL EL +
Sbjct: 509 MNYDEKRQLSLDINKLPGDKLGRVVHIIQSREPSLRNSNPDEIEIDFETLKSSTLRELQK 568
Query: 611 FVTNY--KKSLSKNKRK 625
+V K+SL N ++
Sbjct: 569 YVAGCLRKRSLKPNGKR 585
>gi|365759249|gb|EHN01049.1| Bdf1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 695
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 132/281 (46%), Gaps = 38/281 (13%)
Query: 372 FKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
K C +L++L+ +H + F PVD ++ L YF ++ PMDLGT+ +LN Y+
Sbjct: 327 MKFCQNILKELVAKRHASYNYPFLEPVDPVSMNLPTYFDYVKEPMDLGTIAKKLNDWEYQ 386
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWV----VIESEYNREMRIGA 484
+ ++F DVRL F N +NP G V++M +L ++F KW + E + + + R
Sbjct: 387 TMEDFERDVRLVFKNCYKFNPDGTIVNMMGHRLEEVFNSKWADRPNLDEYDSDEDSRNQG 446
Query: 485 DY-------------EMGFHTPTSRKAPPLPPPLDMRRI----LDRSESITHPMDSRLKP 527
DY E+ P + L L ++ L + E + RL
Sbjct: 447 DYEDYESEYSESDIDEIIITNPAIQY---LEEQLARMKVELQQLKKQELEKIRKERRLAR 503
Query: 528 ISTTPSSRTPAPKKPKAKDPH-KRD--------MTYDEKQKLSTNLQSLPSEKLDNIVQI 578
S R+ K+ H +RD +TYD K+ ++ + LP+ KL+ + I
Sbjct: 504 GSKKRGKRSKGRSGSKSASSHGRRDKKNKLKTVVTYDMKRIITERINDLPTSKLERAIDI 563
Query: 579 IKKRNSSLFQHDDEIEVDIDSVDAETLWEL-DRFVTNYKKS 618
IKK ++ DDE+E+D+D++D T+ L + F Y+ S
Sbjct: 564 IKKSMPNI-SEDDEVELDLDTLDNHTILTLYNTFFRQYESS 603
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%)
Query: 391 FNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPK 450
F PVD L + YF ++ PMDL T++ +LN Y+ P++ ED L +N++ +N
Sbjct: 182 FLQPVDPVKLDIPFYFNYVKRPMDLSTIERKLNVGAYEFPEQITEDFNLMVNNSIRFNGP 241
Query: 451 GQDVHIMAEQLLKIFE 466
+ MA + FE
Sbjct: 242 NAGISQMARNIQASFE 257
>gi|219118433|ref|XP_002179989.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217408246|gb|EEC48180.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 1603
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/101 (45%), Positives = 63/101 (62%)
Query: 379 LEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVR 438
L+ L H+H WVFN PVD LGL DYF +I+ PMDLGT++ +L Y+ +F E V
Sbjct: 582 LKTLQSHQHAWVFNTPVDPVELGLPDYFEVIKKPMDLGTIRKKLENGVYQRLDDFKEHVL 641
Query: 439 LTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNRE 479
LTF NAM YNP+G V+ MA ++ F+ +V + + N E
Sbjct: 642 LTFDNAMMYNPEGSVVYNMANEMKVKFQSDFVKLMEQLNAE 682
>gi|145347283|ref|XP_001418103.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578331|gb|ABO96396.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 859
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 61/100 (61%)
Query: 371 IFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSP 430
+ + C +L KHK+ +F PVD K G+ DYF II++PMD+GTVKT+L+ Y +P
Sbjct: 271 MIRRCREVLIASKKHKYHKIFLVPVDPKKHGVPDYFDIIKNPMDMGTVKTKLDTKAYLNP 330
Query: 431 KEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWV 470
EF D+RL F N + YN D +M E + ++FE W+
Sbjct: 331 AEFCADMRLIFSNGLLYNGTASDAGVMTETVRQLFETAWL 370
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 51/83 (61%), Gaps = 4/83 (4%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQ-HDDEIEVDIDSVDAETLWEL 608
RDMT+DEK +L+ L LP +K D +VQI+ + +L Q +DEIE++I+ + A TLW+L
Sbjct: 517 RDMTFDEKSELTMLLGELPEDKQDRVVQIVSEAKQALGQGEEDEIEINIEELPAATLWKL 576
Query: 609 DRFVTNYKKSLSKNKRKAELANQ 631
++V L KRK A Q
Sbjct: 577 HKYVNGV---LRPKKRKLNAAEQ 596
>gi|63054449|ref|NP_588301.2| Swr1 complex bromodomain subunit Brf1 [Schizosaccharomyces pombe
972h-]
gi|46397302|sp|Q9Y7N0.1|BDF1_SCHPO RecName: Full=SWR1 complex bromodomain subunit bdf1
gi|157310522|emb|CAB41059.2| Swr1 complex bromodomain subunit Brf1 [Schizosaccharomyces pombe]
Length = 578
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 63/101 (62%), Gaps = 3/101 (2%)
Query: 372 FKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
+ CS +L++L K ++ + F PVD DYF +I+ PMDL T++++LNKN Y
Sbjct: 257 MRFCSTVLKELYKRQYESFAFPFYQPVDPVACDCPDYFDVIKEPMDLSTIQSKLNKNEYS 316
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKW 469
+ +EF D+ L F+N TYNP G VH+M QL +F++KW
Sbjct: 317 TLEEFESDILLMFNNCFTYNPPGTPVHVMGRQLENVFKEKW 357
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 53/94 (56%)
Query: 373 KSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKE 432
K C A++ +L + K+ F PVD + DY TI+++PMDLGT++ +L Y P+E
Sbjct: 91 KYCLAIVRQLKRTKNSAPFKVPVDPIKQNIPDYPTIVKNPMDLGTIEKKLTSYEYSVPQE 150
Query: 433 FAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFE 466
F +D+ L F N YN V M + L ++FE
Sbjct: 151 FIDDMNLMFSNCFLYNGTESPVGSMGKALQEVFE 184
>gi|194211115|ref|XP_001493233.2| PREDICTED: bromodomain testis-specific protein-like isoform 2
[Equus caballus]
Length = 928
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/107 (42%), Positives = 63/107 (58%), Gaps = 3/107 (2%)
Query: 372 FKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
+ CS +L++++ KH W F PVDV LGLH+Y+ +++ PMDLGT+K +++ YK
Sbjct: 272 LRHCSEILKEMLAKKHLSYAWPFYNPVDVNALGLHNYYDVVKKPMDLGTIKGKMDNQEYK 331
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
EFA DVRL F N YNP +V MA L +FE + I E
Sbjct: 332 DAYEFAADVRLMFMNCYRYNPPDHEVVTMARMLQDVFEMHFAKIPDE 378
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 51/92 (55%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
+L+ L KH W F PVD L L DY+TII++PMDL T++ RL +Y E ED
Sbjct: 37 VVLKALWKHGFSWPFQQPVDAVKLQLPDYYTIIKNPMDLNTIQKRLEHKYYVKASECIED 96
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN G D+ +MA+ L K+F K
Sbjct: 97 FNTMFSNCYLYNKPGDDIVLMAQALEKLFRQK 128
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWEL 608
+ M+YDEK++LS ++ LP +KL +V II+ R SL + DEIE+D +++ A TL EL
Sbjct: 507 KPMSYDEKRQLSLDINKLPGDKLGRVVHIIQSREPSLRNSNPDEIEIDFETLKASTLREL 566
Query: 609 DRFV 612
+++V
Sbjct: 567 EKYV 570
>gi|410967748|ref|XP_003990377.1| PREDICTED: bromodomain testis-specific protein [Felis catus]
Length = 939
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/107 (42%), Positives = 64/107 (59%), Gaps = 3/107 (2%)
Query: 372 FKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
+ CS +L++++ KH W F PVDV LGLH+Y+ I+++PMDLGT+K +++ YK
Sbjct: 273 LRHCSEILKEMLAKKHLSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKGKMDNQEYK 332
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
EFA DVRL F N YNP +V MA L +FE + I E
Sbjct: 333 DAYEFAADVRLMFMNCYKYNPPDHEVVTMARTLQDVFEMHFAKIPDE 379
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 51/92 (55%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
+L+ L +H W F PVD L L DY+TII+ PMDL T+K RL +Y E ED
Sbjct: 37 VVLKALWRHNFSWPFQQPVDAVKLKLPDYYTIIKTPMDLNTIKKRLEHKYYMKASECIED 96
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
+ F N YN G D+ +MA+ L K+F K
Sbjct: 97 FNIMFSNCYLYNKPGDDIVLMAQALEKLFRQK 128
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 57/98 (58%), Gaps = 9/98 (9%)
Query: 524 RLKPISTTPSSRTPAPKKPKAK--------DPHKRDMTYDEKQKLSTNLQSLPSEKLDNI 575
+ K + S++ PKK K + D + + M YDEK++LS ++ LP +KL +
Sbjct: 473 KFKQMKLKEKSKSNQPKKRKQQVLALKPEDDANAKPMNYDEKRQLSLDINKLPGDKLGRV 532
Query: 576 VQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWELDRFV 612
V II+ R SL + DEIE+D +++ A TL EL+++V
Sbjct: 533 VHIIQSREPSLRNSNPDEIEIDFETLKASTLRELEKYV 570
>gi|355558166|gb|EHH14946.1| hypothetical protein EGK_00962, partial [Macaca mulatta]
Length = 897
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/107 (42%), Positives = 64/107 (59%), Gaps = 3/107 (2%)
Query: 372 FKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
+ CS +L++++ KH W F PVDV LGLH+Y+ I+++PMDLGT+K +++ YK
Sbjct: 280 LRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMDNQEYK 339
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
+FA DVRL F N YNP +V MA L +FE + I E
Sbjct: 340 DAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKIPVE 386
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 51/92 (55%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
+L+ L KH W F PVD L L DY+TII++PMDL T+K RL +Y E ED
Sbjct: 45 VVLKDLWKHSFSWPFQRPVDAVKLKLPDYYTIIKNPMDLNTIKKRLENKYYVKASECIED 104
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN G D+ +MA+ L K+F K
Sbjct: 105 FNTMFSNCYLYNKPGDDIVLMAQALEKLFMQK 136
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWEL 608
+ M YDEK++LS N+ LP +KL +V II+ R SL + DEIE+D +++ A TL EL
Sbjct: 515 KPMNYDEKRQLSLNINKLPGDKLGRVVHIIQSREPSLSNSNPDEIEIDFETLKASTLREL 574
Query: 609 DRFVT 613
+++V+
Sbjct: 575 EKYVS 579
>gi|340381558|ref|XP_003389288.1| PREDICTED: bromodomain-containing protein 2-like [Amphimedon
queenslandica]
Length = 1057
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 59/101 (58%), Gaps = 3/101 (2%)
Query: 372 FKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
+ C ++++ KH W F PVDVK LGLHDY II+ PMDL T+K +L Y+
Sbjct: 456 LRYCLSIVKDFFSKKHQASAWPFYNPVDVKGLGLHDYLDIIKQPMDLTTLKKKLEDREYE 515
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKW 469
P +FA D+RL F N YNP DV MA ++ IFE K+
Sbjct: 516 DPSQFAADMRLIFTNCYKYNPPEHDVVKMARKVQDIFEFKF 556
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 54/94 (57%)
Query: 382 LMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTF 441
+ +H + W F+ PVD L + DYF II+ PMDL +K +L+ N Y S KE +D + F
Sbjct: 208 IWRHHYAWPFHKPVDPVALNIPDYFNIIKRPMDLTLIKKQLDHNGYSSAKECIQDFKTMF 267
Query: 442 HNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
+N TYN DV M + L ++F+ K + +E
Sbjct: 268 NNCYTYNKPTDDVVFMCQALERLFDQKVTGMPAE 301
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 73/132 (55%), Gaps = 11/132 (8%)
Query: 516 SITHPMDSRLKPI-STTPSSRTPAPKKPKAKDPHKRDMTYDEKQKLSTNLQSLPSEKLDN 574
S + P+ L+P S + RTP +P + + + MTYDEK++LS ++ LP L+
Sbjct: 672 STSTPLLPTLQPKKSKSAKKRTPLNWQPSSDEEDVKPMTYDEKRQLSLDINKLPGVTLNR 731
Query: 575 IVQIIKKRNSSLFQ-HDDEIEVDIDSVDAETLWELDRFVTNY---------KKSLSKNKR 624
+V II+ R ++ + DEIE+D +++ TL EL+++V + KS+ K+
Sbjct: 732 VVHIIQMRERTIKDGNPDEIEIDFETLKPATLRELEKYVNSVLKKQKRPPTNKSMDAAKK 791
Query: 625 KAELANQARAVA 636
+AEL + + V+
Sbjct: 792 RAELEKRLQDVS 803
>gi|334321601|ref|XP_001377106.2| PREDICTED: bromodomain testis-specific protein [Monodelphis
domestica]
Length = 1066
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 65/115 (56%), Gaps = 3/115 (2%)
Query: 372 FKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
K C+ +L+++ KH W F PVDV LGLH+Y+ +++ PMDLGT+K +++ YK
Sbjct: 274 LKYCNEILKEMFAKKHLAYAWPFYKPVDVTALGLHNYYDVVKSPMDLGTIKKKMDNQEYK 333
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIG 483
EFA DVRL F N YNP +V MA L +FE ++ I E M I
Sbjct: 334 DAHEFAADVRLMFMNCYKYNPPDHEVVTMARTLQDVFEMQFAKIPDEPIERMPIC 388
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 55/99 (55%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
+L+ L +H W F PVD L L DY++II+ PMDL T+K RL +Y E ED
Sbjct: 37 VVLKALWRHSFSWPFQQPVDAAKLKLPDYYSIIKKPMDLSTIKKRLEHKYYVKSSECVED 96
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
++ F N YN G D+ +MA+ L K+F K + SE
Sbjct: 97 LKTMFTNCYLYNKPGDDIVLMAQALEKLFMQKMSQMPSE 135
Score = 43.9 bits (102), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 45/82 (54%), Gaps = 14/82 (17%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAE----- 603
+ M YDEK++LS ++ LP +KL +V II+ R SL + DEIE+ D E
Sbjct: 511 KPMNYDEKRQLSLDINKLPGDKLGRVVHIIESREPSLRNSNPDEIEI-----DFETLKAS 565
Query: 604 TLWELDRFVTNYKKSLSKNKRK 625
TL EL+++V L K RK
Sbjct: 566 TLRELEKYVMA---CLRKRPRK 584
>gi|402855238|ref|XP_003892238.1| PREDICTED: bromodomain testis-specific protein isoform 4 [Papio
anubis]
gi|402855240|ref|XP_003892239.1| PREDICTED: bromodomain testis-specific protein isoform 5 [Papio
anubis]
Length = 899
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/107 (42%), Positives = 64/107 (59%), Gaps = 3/107 (2%)
Query: 372 FKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
+ CS +L++++ KH W F PVDV LGLH+Y+ I+++PMDLGT+K +++ YK
Sbjct: 227 LRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMDNQEYK 286
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
+FA DVRL F N YNP +V MA L +FE + I E
Sbjct: 287 DAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKIPVE 333
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWEL 608
+ M YDEK++LS N+ LP +KL +V II+ R SL + DEIE+D +++ A TL EL
Sbjct: 462 KPMNYDEKRQLSLNINKLPGDKLGRVVHIIQSREPSLSNSNPDEIEIDFETLKASTLREL 521
Query: 609 DRFVT 613
+++V+
Sbjct: 522 EKYVS 526
>gi|255084403|ref|XP_002508776.1| bromodomain-containing protein [Micromonas sp. RCC299]
gi|226524053|gb|ACO70034.1| bromodomain-containing protein [Micromonas sp. RCC299]
Length = 852
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 59/105 (56%), Gaps = 5/105 (4%)
Query: 371 IFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNK-----N 425
+ K C L + KHK+ W FN PVD L + DYF II++PMD GT+K +L+K
Sbjct: 253 LMKECRECLSSVRKHKYAWAFNKPVDPIALHIPDYFDIIKNPMDFGTIKEKLDKKSQQNG 312
Query: 426 WYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWV 470
Y P+EFA+D+RL F N YN D +M L + FE W+
Sbjct: 313 AYSGPQEFADDMRLVFDNCALYNTPDSDAGLMGSTLQQEFEKAWL 357
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 56/85 (65%), Gaps = 1/85 (1%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLF-QHDDEIEVDIDSVDAETLWEL 608
RDM+Y EKQ+L+ L LP +K +VQI+ +R++ + DD IE++I+ +D+ TLW+L
Sbjct: 509 RDMSYAEKQELTELLGELPEDKQARVVQIVAERHAEMGGAEDDLIEINIEELDSVTLWKL 568
Query: 609 DRFVTNYKKSLSKNKRKAELANQAR 633
DR+V + K K +A++ +A+
Sbjct: 569 DRYVRSCLKPKKKKPTQADMLLEAQ 593
>gi|355745448|gb|EHH50073.1| hypothetical protein EGM_00839, partial [Macaca fascicularis]
Length = 957
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/107 (42%), Positives = 64/107 (59%), Gaps = 3/107 (2%)
Query: 372 FKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
+ CS +L++++ KH W F PVDV LGLH+Y+ I+++PMDLGT+K +++ YK
Sbjct: 284 LRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMDNQEYK 343
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
+FA DVRL F N YNP +V MA L +FE + I E
Sbjct: 344 DAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKIPVE 390
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 51/92 (55%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
+L+ L KH W F PVD L L DY+TII++PMDL T+K RL +Y E ED
Sbjct: 49 VVLKDLWKHSFSWPFQRPVDAVKLKLPDYYTIIKNPMDLNTIKKRLENKYYVKASECIED 108
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN G D+ +MA+ L K+F K
Sbjct: 109 FNTMFSNCYLYNKPGDDIVLMAQALEKLFVQK 140
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWEL 608
+ M YDEK++LS N+ LP +KL +V II+ R SL + DEIE+D +++ A TL EL
Sbjct: 519 KPMNYDEKRQLSLNINKLPGDKLGRVVHIIQSREPSLSNSNPDEIEIDFETLKASTLREL 578
Query: 609 DRFVT 613
+++V+
Sbjct: 579 EKYVS 583
>gi|426330336|ref|XP_004026173.1| PREDICTED: bromodomain testis-specific protein [Gorilla gorilla
gorilla]
Length = 883
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 64/107 (59%), Gaps = 3/107 (2%)
Query: 372 FKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
+ CS +L++++ KH W F PVD+ LGLH+Y+ I+++PMDLGT+K +++ YK
Sbjct: 210 LRHCSEILKEMLAKKHFSYAWPFYNPVDINALGLHNYYDIVKNPMDLGTIKEKMDNQEYK 269
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
+FA DVRL F N YNP +V MA L +FE + I E
Sbjct: 270 DAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKIPIE 316
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 38/65 (58%)
Query: 404 DYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLK 463
DY+TII++PMDL T+K RL +Y E ED F N YN G D+ +MA+ L K
Sbjct: 2 DYYTIIKNPMDLNTIKKRLENKYYGKASECIEDFNTMFSNCYLYNKPGDDIVLMAQALEK 61
Query: 464 IFEDK 468
+F K
Sbjct: 62 LFMQK 66
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWELDR 610
M YDEK++LS N+ LP +KL +V II+ R SL + DEIE+D +++ A TL EL++
Sbjct: 447 MNYDEKRQLSLNINKLPGDKLGRVVHIIQSREPSLSNSNADEIEIDFETLKASTLRELEK 506
Query: 611 FVT 613
+V+
Sbjct: 507 YVS 509
>gi|348511137|ref|XP_003443101.1| PREDICTED: bromodomain-containing protein 2-like [Oreochromis
niloticus]
Length = 819
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/117 (41%), Positives = 66/117 (56%), Gaps = 3/117 (2%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G S + CS LL+ ++ KH W F PVD LGLHDY II+ PMDL T+K ++
Sbjct: 367 GKLSPQLRYCSGLLKDMLSKKHAAYAWPFYTPVDAAALGLHDYHDIIKCPMDLSTIKRKM 426
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNRE 479
+ Y+ ++FA DVRL F N YNP DV MA +L +FE ++ + E + E
Sbjct: 427 DCREYRDAQQFASDVRLMFSNCYKYNPPDHDVVGMARKLQDVFEFRFAKMPDEPHME 483
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 51/91 (56%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
L++ L +H W F PVD L L DY II+ PMD+GT+K RL N+Y+S E +D
Sbjct: 82 LMKSLWRHHFAWPFQEPVDAYKLNLPDYHKIIKQPMDMGTIKKRLENNFYRSASECIQDF 141
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN D+ +MA+ L KIF K
Sbjct: 142 NTMFTNCYIYNKPTDDIVLMAQSLEKIFLQK 172
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 56/100 (56%), Gaps = 10/100 (10%)
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQ-HDDEIEVDIDSVDAETLWELDR 610
M+YDEK++LS ++ LP EKL +V II+ R SL + +EIE+D +++ TL EL+R
Sbjct: 661 MSYDEKRQLSLDINKLPGEKLGRVVHIIQSREPSLRDTNPEEIEIDFETLKPSTLKELER 720
Query: 611 FVTN---------YKKSLSKNKRKAELANQARAVAQQNVQ 641
+V Y + S K K EL + R ++ +Q
Sbjct: 721 YVMTCLRKKPRKPYAEQGSIGKSKEELTLEKRRELERRLQ 760
>gi|425906067|sp|Q4R8Y1.3|BRDT_MACFA RecName: Full=Bromodomain testis-specific protein
Length = 947
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/107 (42%), Positives = 64/107 (59%), Gaps = 3/107 (2%)
Query: 372 FKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
+ CS +L++++ KH W F PVDV LGLH+Y+ I+++PMDLGT+K +++ YK
Sbjct: 273 LRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMDNQEYK 332
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
+FA DVRL F N YNP +V MA L +FE + I E
Sbjct: 333 DAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKIPVE 379
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 51/92 (55%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
+L+ L KH W F PVD L L DY+TII++PMDL T+K RL +Y E ED
Sbjct: 38 VVLKDLWKHSFSWPFQRPVDAVKLKLPDYYTIIKNPMDLNTIKKRLENKYYVKASECIED 97
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN G D+ +MA+ L K+F K
Sbjct: 98 FNTMFSNCYLYNKPGDDIVLMAQALEKLFVQK 129
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWEL 608
+ M YDEK++LS N+ LP +KL +V II+ R SL + DEIE+D +++ A TL EL
Sbjct: 508 KPMNYDEKRQLSLNINKLPGDKLGRVVHIIQSREPSLSNSNPDEIEIDFETLKASTLREL 567
Query: 609 DRFVT 613
+++V+
Sbjct: 568 EKYVS 572
>gi|332809506|ref|XP_003339041.1| PREDICTED: bromodomain testis-specific protein [Pan troglodytes]
gi|332809508|ref|XP_003308259.1| PREDICTED: bromodomain testis-specific protein isoform 2 [Pan
troglodytes]
Length = 824
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/107 (42%), Positives = 64/107 (59%), Gaps = 3/107 (2%)
Query: 372 FKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
+ CS +L++++ KH W F PVDV LGLH+Y+ I+++PMDLGT+K +++ YK
Sbjct: 227 LRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMDNQEYK 286
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
+FA DVRL F N YNP +V MA L +FE + I E
Sbjct: 287 DAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKIPIE 333
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWEL 608
+ M YDEK++LS N+ LP +KL +V II+ R SL + DEIE+D +++ A TL EL
Sbjct: 462 KPMNYDEKRQLSLNINKLPGDKLGRVVHIIQSREPSLSNSNPDEIEIDFETLKASTLREL 521
Query: 609 DRFVT 613
+++V+
Sbjct: 522 EKYVS 526
>gi|354480438|ref|XP_003502414.1| PREDICTED: bromodomain testis-specific protein-like [Cricetulus
griseus]
Length = 839
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/107 (42%), Positives = 63/107 (58%), Gaps = 3/107 (2%)
Query: 372 FKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
K CS +L++++ KH W F PVD LGLH+Y+ I+++PMDLGT+K +++ YK
Sbjct: 272 LKYCSEILKEMLAKKHLSYAWPFYNPVDADALGLHNYYDIVKNPMDLGTIKGKMDNQEYK 331
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
EFA DVRL F N YNP +V MA L +FE + I E
Sbjct: 332 DAYEFAADVRLMFMNCYKYNPPDHEVVSMARMLQDVFEMHFAKIPDE 378
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 50/92 (54%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
+L+ L KH W F PVD L L DY+TII+ PMDL T+K RL +Y E ED
Sbjct: 37 VVLKALWKHSFSWPFQQPVDAVKLKLPDYYTIIKTPMDLNTIKKRLENKYYVKASECIED 96
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN G D+ +MA+ L K+F K
Sbjct: 97 FNTMFSNCYLYNKPGDDIVLMAQALEKLFLQK 128
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWEL 608
+ M YDEK++LS ++ LP EKL IV II+ R SL + DEIE+D +++ TL EL
Sbjct: 504 KPMNYDEKRQLSLDINKLPGEKLGRIVHIIQSREPSLRNSNPDEIEIDFETLKPSTLREL 563
Query: 609 DRFV 612
+++V
Sbjct: 564 EKYV 567
>gi|67967916|dbj|BAE00440.1| unnamed protein product [Macaca fascicularis]
Length = 609
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/107 (42%), Positives = 65/107 (60%), Gaps = 3/107 (2%)
Query: 372 FKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
+ CS +L++++ KH W F PVDV LGLH+Y+ I+++PMDLGT+K +++ YK
Sbjct: 273 LRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMDNQEYK 332
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
+FA DVRL F N YNP +V MA +L +FE + I E
Sbjct: 333 DAYKFAADVRLMFMNCYKYNPPDHEVVTMARRLQDVFETHFSKIPVE 379
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 51/92 (55%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
+L+ L KH W F PVD L L DY+TII++PMDL T+K RL +Y E ED
Sbjct: 38 VVLKDLWKHSFSWPFQRPVDAVKLKLPDYYTIIKNPMDLNTIKKRLENKYYVKASECIED 97
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN G D+ +MA+ L K+F K
Sbjct: 98 FNTMFSNCYLYNKPGDDIVLMAQALEKLFMQK 129
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWEL 608
+ M YDEK++LS N+ LP +KL +V II+ R SL + DEIE+D +++ A TL EL
Sbjct: 508 KPMNYDEKRQLSLNINKLPGDKLGRVVHIIQSREPSLSNSNPDEIEIDFETLKASTLREL 567
Query: 609 DRFVT 613
+++V+
Sbjct: 568 EKYVS 572
>gi|261278848|pdb|3JVL|A Chain A, Crystal Structure Of Bromodomain 2 Of Mouse Brd4
gi|261278849|pdb|3JVM|A Chain A, Crystal Structure Of Bromodomain 2 Of Mouse Brd4
Length = 120
Score = 100 bits (250), Expect = 2e-18, Method: Composition-based stats.
Identities = 50/114 (43%), Positives = 68/114 (59%), Gaps = 6/114 (5%)
Query: 368 GSKI---FKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTR 421
GSKI K CS +L+++ KH W F PVDV+ LGLHDY II+HPMD+ T+K++
Sbjct: 4 GSKISEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSK 63
Query: 422 LNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
L Y+ +EF DVRL F N YNP +V MA +L +FE ++ + E
Sbjct: 64 LESREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE 117
>gi|338797768|ref|NP_001229739.1| bromodomain testis-specific protein isoform d [Homo sapiens]
gi|119593515|gb|EAW73109.1| bromodomain, testis-specific, isoform CRA_b [Homo sapiens]
Length = 874
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 64/107 (59%), Gaps = 3/107 (2%)
Query: 372 FKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
+ CS +L++++ KH W F PVDV LGLH+Y+ ++++PMDLGT+K +++ YK
Sbjct: 200 LRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDVVKNPMDLGTIKEKMDNQEYK 259
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
+FA DVRL F N YNP +V MA L +FE + I E
Sbjct: 260 DAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKIPIE 306
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWELDR 610
M YDEK++LS N+ LP +KL +V II+ R SL + DEIE+D +++ A TL EL++
Sbjct: 437 MNYDEKRQLSLNINKLPGDKLGRVVHIIQSREPSLSNSNPDEIEIDFETLKASTLRELEK 496
Query: 611 FVT 613
+V+
Sbjct: 497 YVS 499
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 29/57 (50%)
Query: 413 MDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKW 469
MDL T+K RL +Y E ED F N YN G D+ +MA+ L K+F K
Sbjct: 1 MDLNTIKKRLENKYYAKASECIEDFNTMFSNCYLYNKPGDDIVLMAQALEKLFMQKL 57
>gi|392885383|ref|NP_491384.3| Protein BET-1, isoform a [Caenorhabditis elegans]
gi|351060603|emb|CCD68309.1| Protein BET-1, isoform a [Caenorhabditis elegans]
Length = 853
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 97/220 (44%), Gaps = 49/220 (22%)
Query: 372 FKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
K C LL K+ W FN PVD + LGLHDY II+ PMDL ++K ++ YK
Sbjct: 263 MKPCLKLLNDFSTKKYQEFAWPFNEPVDAEQLGLHDYHKIIKEPMDLKSMKAKMESGAYK 322
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEM 488
P +F DVRL N YNP G VH + ++F+ +W + +R +
Sbjct: 323 EPSDFEHDVRLMLRNCFLYNPVGDPVHSFGLRFQEVFDRRWAELGDSSSRASSVA----- 377
Query: 489 GFHTPTSRKAPPLPPPLDMRRILDRSESITHPMDSRLKPISTTPS-SRTPAPKKPK-AKD 546
P S PI+ TP +++ APK+PK ++
Sbjct: 378 ----PQS------------------------------APIAPTPKVAKSSAPKEPKESRK 403
Query: 547 PHKRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSL 586
HK++ T++ S +L +++N + +I++R L
Sbjct: 404 EHKKETTFEASGAKSEDLM-----QINNALSMIREREEKL 438
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 49/90 (54%)
Query: 376 SALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAE 435
+ +L++ KHKH W F PVD L + Y + PMDL T++ RL +Y +E +
Sbjct: 49 TTVLKEAGKHKHVWPFQKPVDAVALCIPLYHERVARPMDLKTIENRLKSTYYTCAQECID 108
Query: 436 DVRLTFHNAMTYNPKGQDVHIMAEQLLKIF 465
D+ F N T+N K DV IMA+ + ++
Sbjct: 109 DIETVFQNCYTFNGKEDDVTIMAQNVHEVI 138
Score = 47.8 bits (112), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 44/69 (63%), Gaps = 4/69 (5%)
Query: 548 HKRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRN-SSLFQH---DDEIEVDIDSVDAE 603
+K +TY+EK+ LS + +LP+ +L+ I+ II++R S+L Q D E+E+D +S+
Sbjct: 522 NKMALTYEEKRNLSNLINNLPNNQLNTIISIIQRRERSALMQQQLDDSEVELDFESLGDM 581
Query: 604 TLWELDRFV 612
L E+ F+
Sbjct: 582 CLREMGAFI 590
>gi|402855232|ref|XP_003892235.1| PREDICTED: bromodomain testis-specific protein isoform 1 [Papio
anubis]
gi|402855234|ref|XP_003892236.1| PREDICTED: bromodomain testis-specific protein isoform 2 [Papio
anubis]
gi|402855236|ref|XP_003892237.1| PREDICTED: bromodomain testis-specific protein isoform 3 [Papio
anubis]
Length = 945
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/107 (42%), Positives = 64/107 (59%), Gaps = 3/107 (2%)
Query: 372 FKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
+ CS +L++++ KH W F PVDV LGLH+Y+ I+++PMDLGT+K +++ YK
Sbjct: 273 LRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMDNQEYK 332
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
+FA DVRL F N YNP +V MA L +FE + I E
Sbjct: 333 DAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKIPVE 379
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 51/92 (55%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
+L+ L KH W F PVD L L DY+TII++PMDL T+K RL +Y E ED
Sbjct: 38 VVLKDLWKHSFSWPFQRPVDAVKLKLPDYYTIIKNPMDLNTIKKRLENKYYVKASECIED 97
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN G D+ +MA+ L K+F K
Sbjct: 98 FNTMFSNCYLYNKPGDDIVLMAQALEKLFMQK 129
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWEL 608
+ M YDEK++LS N+ LP +KL +V II+ R SL + DEIE+D +++ A TL EL
Sbjct: 508 KPMNYDEKRQLSLNINKLPGDKLGRVVHIIQSREPSLSNSNPDEIEIDFETLKASTLREL 567
Query: 609 DRFVT 613
+++V+
Sbjct: 568 EKYVS 572
>gi|387014800|gb|AFJ49519.1| bromodomain-containing protein 2-like [Crotalus adamanteus]
Length = 715
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/113 (41%), Positives = 65/113 (57%), Gaps = 3/113 (2%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G S+ K C+ +L++L+ +H W F PVD LGLHDY II+HPMDL ++K ++
Sbjct: 349 GKLSEQLKYCNGILKELVSKRHAAYAWPFYKPVDASALGLHDYHEIIKHPMDLSSIKRKM 408
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
Y+ +EFA DVRL F N YNP DV MA +L +FE + + E
Sbjct: 409 ENREYRDAQEFASDVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFSYAKMPDE 461
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 51/91 (56%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD LGL DY II+ PMD+GT+K RL +Y S E +D
Sbjct: 87 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENGYYWSSGECMQDF 146
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN D+ +MA+ L KIF K
Sbjct: 147 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 177
>gi|397473969|ref|XP_003808466.1| PREDICTED: bromodomain testis-specific protein isoform 4 [Pan
paniscus]
gi|397473971|ref|XP_003808467.1| PREDICTED: bromodomain testis-specific protein isoform 5 [Pan
paniscus]
Length = 901
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/107 (42%), Positives = 64/107 (59%), Gaps = 3/107 (2%)
Query: 372 FKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
+ CS +L++++ KH W F PVDV LGLH+Y+ I+++PMDLGT+K +++ YK
Sbjct: 227 LRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMDNQEYK 286
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
+FA DVRL F N YNP +V MA L +FE + I E
Sbjct: 287 DAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKIPIE 333
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWEL 608
+ M YDEK++LS N+ LP +KL +V II+ R SL + DEIE+D +++ A TL EL
Sbjct: 462 KPMNYDEKRQLSLNINKLPGDKLGRVVHIIQSREPSLSNSNPDEIEIDFETLKASTLREL 521
Query: 609 DRFVT 613
+++V+
Sbjct: 522 EKYVS 526
>gi|120431736|ref|NP_473395.2| bromodomain testis-specific protein isoform A [Mus musculus]
gi|425906068|sp|Q91Y44.3|BRDT_MOUSE RecName: Full=Bromodomain testis-specific protein; AltName:
Full=Bromodomain-containing female sterile homeotic-like
protein; AltName: Full=RING3-like protein
gi|148688221|gb|EDL20168.1| bromodomain, testis-specific [Mus musculus]
Length = 956
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/107 (42%), Positives = 63/107 (58%), Gaps = 3/107 (2%)
Query: 372 FKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
K CS +L++++ KH W F PVD LGLH+Y+ ++++PMDLGT+K +++ YK
Sbjct: 272 LKHCSEILKEMLAKKHLPYAWPFYNPVDADALGLHNYYDVVKNPMDLGTIKGKMDNQEYK 331
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
EFA DVRL F N YNP +V MA L +FE + I E
Sbjct: 332 DAYEFAADVRLMFMNCYKYNPPDHEVVAMARTLQDVFELHFAKIPDE 378
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 51/92 (55%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
+L+ L KH W F PVD L L DY+TII+ PMDL T+K RL +Y+ E ED
Sbjct: 37 VVLKALWKHGFSWPFQQPVDAVKLKLPDYYTIIKTPMDLNTIKKRLENKYYEKASECIED 96
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN G D+ +MA+ L K+F K
Sbjct: 97 FNTMFSNCYLYNKTGDDIVVMAQALEKLFMQK 128
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 50/80 (62%), Gaps = 3/80 (3%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWEL 608
+ M YDEK++LS ++ LP +KL IV II+ R SL + DEIE+D +++ A TL EL
Sbjct: 504 KPMNYDEKRQLSLDINKLPGDKLGRIVHIIQSREPSLRNSNPDEIEIDFETLKASTLREL 563
Query: 609 DRFVTNY--KKSLSKNKRKA 626
+++V K+SL +K
Sbjct: 564 EKYVLACLRKRSLKPQAKKV 583
>gi|395730261|ref|XP_002810633.2| PREDICTED: LOW QUALITY PROTEIN: bromodomain testis-specific protein
[Pongo abelii]
Length = 1038
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/107 (42%), Positives = 64/107 (59%), Gaps = 3/107 (2%)
Query: 372 FKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
K CS +L++++ KH W F PVDV LGLH+Y+ I+++PMDLGT+K +++ YK
Sbjct: 344 LKHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMDNQEYK 403
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
+FA DVRL F N YNP +V MA L +FE + I E
Sbjct: 404 DAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKIPVE 450
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 51/92 (55%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
+L+ L KH W F PVD L L DY+TII++PMDL T+K RL +Y E ED
Sbjct: 110 VVLKDLWKHSFSWPFQRPVDAVKLKLPDYYTIIKNPMDLNTIKKRLENKYYAKASECIED 169
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN G D+ +MA+ L K+F K
Sbjct: 170 FNTMFSNCYLYNKPGDDIVLMAQTLEKLFMQK 201
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWEL 608
+ M YDEK++LS N+ LP +KL +V+II+ R SL + DEIE+D +++ A TL EL
Sbjct: 579 KPMNYDEKRQLSLNINKLPGDKLGRVVRIIQSREPSLSSSNPDEIEIDFETLKASTLREL 638
Query: 609 DRFVT 613
+++V+
Sbjct: 639 EKYVS 643
>gi|332809502|ref|XP_524767.3| PREDICTED: bromodomain testis-specific protein isoform 4 [Pan
troglodytes]
gi|332809504|ref|XP_003308258.1| PREDICTED: bromodomain testis-specific protein isoform 1 [Pan
troglodytes]
gi|410033223|ref|XP_003949508.1| PREDICTED: bromodomain testis-specific protein [Pan troglodytes]
Length = 870
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/107 (42%), Positives = 64/107 (59%), Gaps = 3/107 (2%)
Query: 372 FKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
+ CS +L++++ KH W F PVDV LGLH+Y+ I+++PMDLGT+K +++ YK
Sbjct: 273 LRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMDNQEYK 332
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
+FA DVRL F N YNP +V MA L +FE + I E
Sbjct: 333 DAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKIPIE 379
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 51/92 (55%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
+L+ L KH W F PVD L L DY+TII++PMDL T+K RL +Y E ED
Sbjct: 38 VVLKDLWKHSFSWPFQRPVDAVKLKLPDYYTIIKNPMDLNTIKKRLENKYYMKASECIED 97
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN G D+ +MA+ L K+F K
Sbjct: 98 FNTMFSNCYLYNKPGDDIVLMAQALEKLFMQK 129
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWEL 608
+ M YDEK++LS N+ LP +KL +V II+ R SL + DEIE+D +++ A TL EL
Sbjct: 508 KPMNYDEKRQLSLNINKLPGDKLGRVVHIIQSREPSLSNSNPDEIEIDFETLKASTLREL 567
Query: 609 DRFVT 613
+++V+
Sbjct: 568 EKYVS 572
>gi|157126758|ref|XP_001654739.1| hypothetical protein AaeL_AAEL002090 [Aedes aegypti]
gi|108882525|gb|EAT46750.1| AAEL002090-PA, partial [Aedes aegypti]
Length = 506
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/107 (46%), Positives = 63/107 (58%), Gaps = 3/107 (2%)
Query: 372 FKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
+SC+ +L++L KH W F PVD + LGLHDY II+ PMDLGTVK +++ YK
Sbjct: 322 MRSCNEILKELFSKKHSGYAWPFYKPVDAELLGLHDYHDIIKKPMDLGTVKRKMDNREYK 381
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
S EFA DVRL F N YNP DV M +L +FE + I E
Sbjct: 382 SANEFAADVRLIFTNCYKYNPPDHDVVAMGRKLQDVFEMRLANIPDE 428
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 45/107 (42%), Positives = 63/107 (58%), Gaps = 1/107 (0%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ + KH+ W F PVD K L L DY II+ PMDLGT+K RL N+Y + KE +D
Sbjct: 24 VMKAVWKHQFSWPFQQPVDAKKLNLPDYHKIIKQPMDLGTIKKRLENNYYWTSKESIQDF 83
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGA 484
+ F N YN G+DV +MA+ L K+F K ++ E EM + A
Sbjct: 84 NIMFSNCYVYNKPGEDVVVMAQALEKLFLTKVSLMPKE-EVEMEVPA 129
>gi|389632607|ref|XP_003713956.1| hypothetical protein MGG_08925 [Magnaporthe oryzae 70-15]
gi|351646289|gb|EHA54149.1| hypothetical protein MGG_08925 [Magnaporthe oryzae 70-15]
Length = 1021
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 61/106 (57%), Gaps = 3/106 (2%)
Query: 372 FKSCSALLEKLMKHK-HG--WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
K C +L+ L K K HG W+F PVD G Y++II+ PMDLGT+ +L + Y+
Sbjct: 595 LKYCDDILKDLAKPKSHGIAWIFAKPVDETRDGAPGYYSIIKKPMDLGTMTVKLQEGKYR 654
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIES 474
S +F D L +N T+NP G DVH +A L F+DKW I++
Sbjct: 655 SAADFKADFDLMLNNCFTFNPAGTDVHALARNLEAYFQDKWAGIDA 700
>gi|343962325|dbj|BAK62750.1| bromodomain testis-specific protein [Pan troglodytes]
Length = 947
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/107 (42%), Positives = 64/107 (59%), Gaps = 3/107 (2%)
Query: 372 FKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
+ CS +L++++ KH W F PVDV LGLH+Y+ I+++PMDLGT+K +++ YK
Sbjct: 273 LRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMDNQEYK 332
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
+FA DVRL F N YNP +V MA L +FE + I E
Sbjct: 333 DAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKIPIE 379
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 51/92 (55%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
+L+ L KH W F PVD L L DY+TII++PMDL T+K RL +Y E ED
Sbjct: 38 VVLKDLWKHSFSWPFQRPVDAVKLKLPDYYTIIKNPMDLNTIKKRLENKYYMKASECIED 97
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN G D+ +MA+ L K+F K
Sbjct: 98 FNTMFSNCYLYNKPGDDIVLMAQALEKLFMQK 129
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWEL 608
+ M YDEK++LS N+ LP +KL +V II+ R SL + DEIE+D +++ A TL EL
Sbjct: 508 KPMNYDEKRQLSLNINKLPGDKLGRVVHIIQSREPSLSNSNPDEIEIDFETLKASTLREL 567
Query: 609 DRFVT 613
+++V+
Sbjct: 568 EKYVS 572
>gi|13957951|gb|AAK50736.1| bromodomain-containing female sterile homeotic-like protein [Mus
musculus]
Length = 956
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/107 (42%), Positives = 63/107 (58%), Gaps = 3/107 (2%)
Query: 372 FKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
K CS +L++++ KH W F PVD LGLH+Y+ ++++PMDLGT+K +++ YK
Sbjct: 272 LKHCSEILKEMLAKKHLPYAWPFYNPVDADALGLHNYYDVVKNPMDLGTIKGKMDNQEYK 331
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
EFA DVRL F N YNP +V MA L +FE + I E
Sbjct: 332 DAYEFAADVRLMFMNCYKYNPPDHEVVAMARTLQDVFELHFAKIPDE 378
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 51/92 (55%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
+L+ L KH W F PVD L L DY+TII+ PMDL T+K RL +Y+ E ED
Sbjct: 37 VVLKALWKHGFSWPFQQPVDAVKLKLPDYYTIIKTPMDLNTIKKRLENKYYEKASECIED 96
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN G D+ +MA+ L K+F K
Sbjct: 97 FNTMFSNCYLYNKTGDDIVVMAQALEKLFMQK 128
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 50/80 (62%), Gaps = 3/80 (3%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWEL 608
+ M YDEK++LS ++ LP +KL IV II+ R SL + DEIE+D +++ A TL EL
Sbjct: 504 KPMNYDEKRQLSLDINKLPGDKLGRIVHIIQSREPSLRNSNPDEIEIDFETLKASTLREL 563
Query: 609 DRFVTNY--KKSLSKNKRKA 626
+++V K+SL +K
Sbjct: 564 EKYVLACLRKRSLKPQAKKV 583
>gi|221044240|dbj|BAH13797.1| unnamed protein product [Homo sapiens]
Length = 901
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 64/107 (59%), Gaps = 3/107 (2%)
Query: 372 FKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
+ CS +L++++ KH W F PVDV LGLH+Y+ ++++PMDLGT+K +++ YK
Sbjct: 227 LRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDVVKNPMDLGTIKEKMDNQEYK 286
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
+FA DVRL F N YNP +V MA L +FE + I E
Sbjct: 287 DAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKIPIE 333
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWEL 608
+ M YDEK++LS N+ LP +KL +V II+ R SL + DEIE+D +++ A TL EL
Sbjct: 462 KPMNYDEKRQLSLNINKLPGDKLGRVVHIIQSREPSLSNSNPDEIEIDFETLKASTLREL 521
Query: 609 DRFVT 613
+++V+
Sbjct: 522 EKYVS 526
>gi|213405871|ref|XP_002173707.1| bromodomain-containing protein [Schizosaccharomyces japonicus
yFS275]
gi|212001754|gb|EEB07414.1| bromodomain-containing protein [Schizosaccharomyces japonicus
yFS275]
Length = 596
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 63/102 (61%), Gaps = 3/102 (2%)
Query: 372 FKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
+ CS ++++L K ++ + F PVD DYF II+HPMDL TV+ +LN Y+
Sbjct: 228 MRFCSTIIKELHKRQYSTFAYPFYQPVDPVACDCPDYFDIIKHPMDLSTVQKKLNNGEYE 287
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWV 470
+P +F D+RL F+N TYNP G VH M +L +F++KW+
Sbjct: 288 TPSDFEADIRLIFNNCYTYNPVGTPVHEMGRKLEAVFDEKWL 329
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 56/94 (59%)
Query: 373 KSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKE 432
K C A++ +L + K F APVD + DY TII+HPMDLGT++ RL + Y S +E
Sbjct: 67 KYCLAIVRQLKRTKDSIPFRAPVDPVKQNIPDYPTIIKHPMDLGTIEKRLTGHIYNSAQE 126
Query: 433 FAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFE 466
F +D+RL F N TYN V +M + + IFE
Sbjct: 127 FIDDMRLMFSNCFTYNGTTSPVGVMGKNIETIFE 160
>gi|440473196|gb|ELQ42011.1| hypothetical protein OOU_Y34scaffold00240g18 [Magnaporthe oryzae
Y34]
gi|440484338|gb|ELQ64424.1| hypothetical protein OOW_P131scaffold00625g16 [Magnaporthe oryzae
P131]
Length = 1000
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 61/106 (57%), Gaps = 3/106 (2%)
Query: 372 FKSCSALLEKLMKHK-HG--WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
K C +L+ L K K HG W+F PVD G Y++II+ PMDLGT+ +L + Y+
Sbjct: 574 LKYCDDILKDLAKPKSHGIAWIFAKPVDETRDGAPGYYSIIKKPMDLGTMTVKLQEGKYR 633
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIES 474
S +F D L +N T+NP G DVH +A L F+DKW I++
Sbjct: 634 SAADFKADFDLMLNNCFTFNPAGTDVHALARNLEAYFQDKWAGIDA 679
>gi|397473963|ref|XP_003808463.1| PREDICTED: bromodomain testis-specific protein isoform 1 [Pan
paniscus]
gi|397473965|ref|XP_003808464.1| PREDICTED: bromodomain testis-specific protein isoform 2 [Pan
paniscus]
gi|397473967|ref|XP_003808465.1| PREDICTED: bromodomain testis-specific protein isoform 3 [Pan
paniscus]
Length = 947
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/107 (42%), Positives = 64/107 (59%), Gaps = 3/107 (2%)
Query: 372 FKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
+ CS +L++++ KH W F PVDV LGLH+Y+ I+++PMDLGT+K +++ YK
Sbjct: 273 LRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMDNQEYK 332
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
+FA DVRL F N YNP +V MA L +FE + I E
Sbjct: 333 DAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKIPIE 379
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 51/92 (55%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
+L+ L KH W F PVD L L DY+TII++PMDL T+K RL +Y E ED
Sbjct: 38 VVLKDLWKHSFSWPFQRPVDAVKLKLPDYYTIIKNPMDLNTIKKRLENKYYVKASECIED 97
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN G D+ +MA+ L K+F K
Sbjct: 98 FNTMFSNCYLYNKPGDDIVLMAQALEKLFMQK 129
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWEL 608
+ M YDEK++LS N+ LP +KL +V II+ R SL + DEIE+D +++ A TL EL
Sbjct: 508 KPMNYDEKRQLSLNINKLPGDKLGRVVHIIQSREPSLSNSNPDEIEIDFETLKASTLREL 567
Query: 609 DRFVT 613
+++V+
Sbjct: 568 EKYVS 572
>gi|338797761|ref|NP_001229737.1| bromodomain testis-specific protein isoform c [Homo sapiens]
gi|338797763|ref|NP_001229736.1| bromodomain testis-specific protein isoform c [Homo sapiens]
Length = 901
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 64/107 (59%), Gaps = 3/107 (2%)
Query: 372 FKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
+ CS +L++++ KH W F PVDV LGLH+Y+ ++++PMDLGT+K +++ YK
Sbjct: 227 LRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDVVKNPMDLGTIKEKMDNQEYK 286
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
+FA DVRL F N YNP +V MA L +FE + I E
Sbjct: 287 DAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKIPIE 333
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWEL 608
+ M YDEK++LS N+ LP +KL +V II+ R SL + DEIE+D +++ A TL EL
Sbjct: 462 KPMNYDEKRQLSLNINKLPGDKLGRVVHIIQSREPSLSNSNPDEIEIDFETLKASTLREL 521
Query: 609 DRFVT 613
+++V+
Sbjct: 522 EKYVS 526
>gi|221046272|dbj|BAH14813.1| unnamed protein product [Homo sapiens]
Length = 901
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 64/107 (59%), Gaps = 3/107 (2%)
Query: 372 FKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
+ CS +L++++ KH W F PVDV LGLH+Y+ ++++PMDLGT+K +++ YK
Sbjct: 227 LRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDVVKNPMDLGTIKEKMDNQEYK 286
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
+FA DVRL F N YNP +V MA L +FE + I E
Sbjct: 287 DAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKIPIE 333
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWEL 608
+ M YDEK++LS N+ LP +KL +V II+ R SL + DEIE+D +++ A TL EL
Sbjct: 462 KPMNYDEKRQLSLNINKLPGDKLGRVVHIIQSREPSLSNSNPDEIEIDFETLKASTLREL 521
Query: 609 DRFVT 613
+++V+
Sbjct: 522 EKYVS 526
>gi|50303459|ref|XP_451671.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49640803|emb|CAH02064.1| KLLA0B03113p [Kluyveromyces lactis]
Length = 661
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 131/284 (46%), Gaps = 42/284 (14%)
Query: 372 FKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNW-Y 427
K C +L++L+ K+ + F PVD L YF ++ PMDLGTV+ +LN NW Y
Sbjct: 282 MKFCQQVLKELLSKKYSSFNYPFLEPVDPVALNCPTYFDFVKEPMDLGTVQKKLN-NWEY 340
Query: 428 KSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKW----VVIESEYNREMRIG 483
++ +EF DVRL F N +NP+G V++M +L +F KW V+ E E E G
Sbjct: 341 QTSEEFEHDVRLVFKNCYAFNPEGTIVNMMGHRLEDVFNSKWADRPVIPEEESADE---G 397
Query: 484 ADYEMGFHTP-------------TSRKAPPLPPPLDMRRI---------LDRSESITHPM 521
+ E G+ + T+ L L+ +I LDR
Sbjct: 398 GESEDGYESDEPSEEEQIDETQITNPAIQYLEQQLERMKIELQQLKKQELDRIRKERRAA 457
Query: 522 DSRLKPISTTPSSRTPAPK------KPKAKDPHKRDMTYDEKQKLSTNLQSLPSEKLDNI 575
+ +KP ++ A K + K+ K +TYD K+ +S + LP KL+
Sbjct: 458 RASMKPKRKGKGTKRKATANSKSMGKRRKKNSLKVVVTYDMKRTISERIGDLPEGKLEKA 517
Query: 576 VQIIKKRNSSLFQHDDEIEVDIDSVDAETLWEL-DRFVTNYKKS 618
V II+K + DDE+E+DI+ +D T+ L + F Y S
Sbjct: 518 VDIIRKSMPEI-GADDEVELDIEQLDETTILTLYNTFFRKYDTS 560
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%)
Query: 391 FNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPK 450
F+ PVD L + YF I PMDL T++ +LN + Y++P++ +D L N + +N
Sbjct: 139 FHKPVDPVALNIPLYFNYIPRPMDLSTIERKLNLDAYETPEQVTDDFNLMVSNCIKFNGD 198
Query: 451 GQDVHIMAEQLLKIFE 466
+ MA + FE
Sbjct: 199 KAVISQMARNIQASFE 214
>gi|149034725|gb|EDL89462.1| bromodomain containing 4, isoform CRA_a [Rattus norvegicus]
Length = 915
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 98/202 (48%), Gaps = 20/202 (9%)
Query: 278 VASVGVPV-TRVGITRPSRPLNQLSISTVENSLGLSENVEKEKRTPKANQFYRNSEFLLA 336
+A+ PV T+ G+ R + +I + L+ + K P+ R S
Sbjct: 276 IATTPQPVKTKKGVKRKADTTTPTTIDPIHEPPSLAPEPKTAKLGPR-----RESSR--- 327
Query: 337 KDKFPPAESNKKSKLNGKKQAGNELAHGFGTGSKIFKSCSALLEKLMKHKH---GWVFNA 393
P + KK + ++ G E + S+ K CS +L+++ KH W F
Sbjct: 328 -----PVKPPKKDVPDSQQHPGPEKSSKI---SEQLKCCSGILKEMFAKKHAAYAWPFYK 379
Query: 394 PVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQD 453
PVDV+ LGLHDY II+HPMD+ T+K++L Y+ +EF DVRL F N YNP +
Sbjct: 380 PVDVEALGLHDYCDIIKHPMDMSTIKSKLESREYRDAQEFGADVRLMFSNCYKYNPPDHE 439
Query: 454 VHIMAEQLLKIFEDKWVVIESE 475
V MA +L +FE ++ + E
Sbjct: 440 VVAMARKLQDVFEMRFAKMPDE 461
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 60/107 (56%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+L+ L KH+ W F PVD L L DY+ II+ PMD+GT+K RL N+Y + +E +D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGA 484
F N YN G D+ +MAE L K+F K + +E M + A
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEETEIMIVQA 176
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 51/79 (64%), Gaps = 5/79 (6%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLF-QHDDEIEVDIDSVDAETLWEL 608
+ M+Y+EK++LS ++ LP EKL +V II+ R SL + DEIE+D +++ TL EL
Sbjct: 609 KPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLREL 668
Query: 609 DRFVTNYKKSLSKNKRKAE 627
+R+VT S + KRK +
Sbjct: 669 ERYVT----SCLRKKRKPQ 683
>gi|338797757|ref|NP_001229735.1| bromodomain testis-specific protein isoform a [Homo sapiens]
Length = 951
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 64/107 (59%), Gaps = 3/107 (2%)
Query: 372 FKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
+ CS +L++++ KH W F PVDV LGLH+Y+ ++++PMDLGT+K +++ YK
Sbjct: 277 LRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDVVKNPMDLGTIKEKMDNQEYK 336
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
+FA DVRL F N YNP +V MA L +FE + I E
Sbjct: 337 DAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKIPIE 383
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 51/92 (55%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
+L+ L KH W F PVD L L DY+TII++PMDL T+K RL +Y E ED
Sbjct: 38 VVLKDLWKHSFSWPFQRPVDAVKLQLPDYYTIIKNPMDLNTIKKRLENKYYAKASECIED 97
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN G D+ +MA+ L K+F K
Sbjct: 98 FNTMFSNCYLYNKPGDDIVLMAQALEKLFMQK 129
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWEL 608
+ M YDEK++LS N+ LP +KL +V II+ R SL + DEIE+D +++ A TL EL
Sbjct: 512 KPMNYDEKRQLSLNINKLPGDKLGRVVHIIQSREPSLSNSNPDEIEIDFETLKASTLREL 571
Query: 609 DRFVT 613
+++V+
Sbjct: 572 EKYVS 576
>gi|390352956|ref|XP_003728006.1| PREDICTED: bromodomain-containing protein 2-like, partial
[Strongylocentrotus purpuratus]
Length = 568
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/107 (44%), Positives = 62/107 (57%), Gaps = 3/107 (2%)
Query: 372 FKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
K C ++++LM KH W F PVD GLHDY II+ PMD+GT+K +L YK
Sbjct: 422 LKFCYGVIKELMSKKHSVYAWPFFKPVDADVFGLHDYHEIIKTPMDMGTIKVKLENRDYK 481
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
+ +FA DVRL F N YNP+ DV MA +L +FE K+ I E
Sbjct: 482 NANDFAADVRLIFRNCYKYNPRDNDVVKMARKLENVFEVKFAKISDE 528
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 55/89 (61%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
+L+ L KH+ W F+ PVD L L DY+ II+ PMDLGT+K RL +Y S KE D
Sbjct: 208 VVLKALWKHQFAWPFHHPVDPTKLALPDYYKIIKTPMDLGTIKKRLESIYYHSAKECISD 267
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIF 465
+L F N ++ G+DV +MA+ L K+F
Sbjct: 268 FKLVFTNCYLHDKPGEDVVLMAQALEKLF 296
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 37/62 (59%)
Query: 404 DYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLK 463
DY II+ PMDLGT+K RL +Y S KE D L F N +N G+DV MA+ L K
Sbjct: 1 DYLKIIKTPMDLGTIKKRLESIYYHSAKECISDFNLVFTNCYLHNKPGEDVVFMAQALEK 60
Query: 464 IF 465
+F
Sbjct: 61 LF 62
>gi|226694198|sp|Q58F21.4|BRDT_HUMAN RecName: Full=Bromodomain testis-specific protein; AltName:
Full=Cancer/testis antigen 9; Short=CT9; AltName:
Full=RING3-like protein
gi|108752098|gb|AAI11928.1| BRDT protein [synthetic construct]
gi|110645559|gb|AAI18499.1| BRDT protein [synthetic construct]
Length = 947
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 64/107 (59%), Gaps = 3/107 (2%)
Query: 372 FKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
+ CS +L++++ KH W F PVDV LGLH+Y+ ++++PMDLGT+K +++ YK
Sbjct: 273 LRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDVVKNPMDLGTIKEKMDNQEYK 332
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
+FA DVRL F N YNP +V MA L +FE + I E
Sbjct: 333 DAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKIPIE 379
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 51/92 (55%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
+L+ L KH W F PVD L L DY+TII++PMDL T+K RL +Y E ED
Sbjct: 38 VVLKDLWKHSFSWPFQRPVDAVKLQLPDYYTIIKNPMDLNTIKKRLENKYYAKASECIED 97
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN G D+ +MA+ L K+F K
Sbjct: 98 FNTMFSNCYLYNKPGDDIVLMAQALEKLFMQK 129
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWEL 608
+ M YDEK++LS N+ LP +KL +V II+ R SL + DEIE+D +++ A TL EL
Sbjct: 508 KPMNYDEKRQLSLNINKLPGDKLGRVVHIIQSREPSLSNSNPDEIEIDFETLKASTLREL 567
Query: 609 DRFVT 613
+++V+
Sbjct: 568 EKYVS 572
>gi|221044398|dbj|BAH13876.1| unnamed protein product [Homo sapiens]
Length = 951
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 64/107 (59%), Gaps = 3/107 (2%)
Query: 372 FKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
+ CS +L++++ KH W F PVDV LGLH+Y+ ++++PMDLGT+K +++ YK
Sbjct: 277 LRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDVVKNPMDLGTIKEKMDNQEYK 336
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
+FA DVRL F N YNP +V MA L +FE + I E
Sbjct: 337 DAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKIPIE 383
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 51/92 (55%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
+L+ L KH W F PVD L L DY+TII++PMDL T+K RL +Y E ED
Sbjct: 38 VVLKNLWKHSFSWPFQRPVDAVKLKLPDYYTIIKNPMDLNTIKKRLENKYYAKASECIED 97
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN G D+ +MA+ L K+F K
Sbjct: 98 FNTMFSNCYLYNKPGDDIVLMAQALEKLFMQK 129
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWEL 608
+ M YDEK++LS N+ LP +KL +V II+ R SL + DEIE+D +++ A TL EL
Sbjct: 512 KPMNYDEKRQLSLNINKLPGDKLGRVVHIIQSREPSLSNSNPDEIEIDFETLKASTLREL 571
Query: 609 DRFVT 613
+++V+
Sbjct: 572 EKYVS 576
>gi|303287933|ref|XP_003063255.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226455087|gb|EEH52391.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 120
Score = 100 bits (248), Expect = 3e-18, Method: Composition-based stats.
Identities = 47/109 (43%), Positives = 63/109 (57%)
Query: 362 AHGFGTGSKIFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTR 421
A T + + +C +L L +HK+ +VF PVD LG+ DY +I+ PMDLGTV +
Sbjct: 7 AEATATRTHVLAACEKVLNALKRHKYYFVFEHPVDPVALGIPDYPDVIKDPMDLGTVGDK 66
Query: 422 LNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWV 470
L + Y P+EF D RLTF N TYN G D H M + +LK FE W+
Sbjct: 67 LARGGYLHPREFEYDCRLTFQNCKTYNSPGTDAHSMGDAMLKEFEKNWL 115
>gi|297279234|ref|XP_001100884.2| PREDICTED: bromodomain testis-specific protein-like [Macaca
mulatta]
Length = 983
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/107 (42%), Positives = 64/107 (59%), Gaps = 3/107 (2%)
Query: 372 FKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
+ CS +L++++ KH W F PVDV LGLH+Y+ I+++PMDLGT+K +++ YK
Sbjct: 309 LRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMDNQEYK 368
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
+FA DVRL F N YNP +V MA L +FE + I E
Sbjct: 369 DAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKIPVE 415
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWEL 608
+ M YDEK++LS N+ LP +KL +V II+ R SL + DEIE+D +++ A TL EL
Sbjct: 544 KPMNYDEKRQLSLNINKLPGDKLGRVVHIIQSREPSLSNSNPDEIEIDFETLKASTLREL 603
Query: 609 DRFVT 613
+++V+
Sbjct: 604 EKYVS 608
>gi|46399198|ref|NP_001717.2| bromodomain testis-specific protein isoform b [Homo sapiens]
gi|46399200|ref|NP_997072.1| bromodomain testis-specific protein isoform b [Homo sapiens]
gi|338797755|ref|NP_001229734.1| bromodomain testis-specific protein isoform b [Homo sapiens]
Length = 947
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 64/107 (59%), Gaps = 3/107 (2%)
Query: 372 FKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
+ CS +L++++ KH W F PVDV LGLH+Y+ ++++PMDLGT+K +++ YK
Sbjct: 273 LRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDVVKNPMDLGTIKEKMDNQEYK 332
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
+FA DVRL F N YNP +V MA L +FE + I E
Sbjct: 333 DAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKIPIE 379
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 51/92 (55%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
+L+ L KH W F PVD L L DY+TII++PMDL T+K RL +Y E ED
Sbjct: 38 VVLKDLWKHSFSWPFQRPVDAVKLQLPDYYTIIKNPMDLNTIKKRLENKYYAKASECIED 97
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN G D+ +MA+ L K+F K
Sbjct: 98 FNTMFSNCYLYNKPGDDIVLMAQALEKLFMQK 129
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWEL 608
+ M YDEK++LS N+ LP +KL +V II+ R SL + DEIE+D +++ A TL EL
Sbjct: 508 KPMNYDEKRQLSLNINKLPGDKLGRVVHIIQSREPSLSNSNPDEIEIDFETLKASTLREL 567
Query: 609 DRFVT 613
+++V+
Sbjct: 568 EKYVS 572
>gi|119593512|gb|EAW73106.1| bromodomain, testis-specific, isoform CRA_a [Homo sapiens]
gi|119593513|gb|EAW73107.1| bromodomain, testis-specific, isoform CRA_a [Homo sapiens]
gi|119593514|gb|EAW73108.1| bromodomain, testis-specific, isoform CRA_a [Homo sapiens]
gi|119593516|gb|EAW73110.1| bromodomain, testis-specific, isoform CRA_a [Homo sapiens]
gi|119593517|gb|EAW73111.1| bromodomain, testis-specific, isoform CRA_a [Homo sapiens]
gi|208965898|dbj|BAG72963.1| bromodomain, testis-specific [synthetic construct]
Length = 947
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 64/107 (59%), Gaps = 3/107 (2%)
Query: 372 FKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
+ CS +L++++ KH W F PVDV LGLH+Y+ ++++PMDLGT+K +++ YK
Sbjct: 273 LRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDVVKNPMDLGTIKEKMDNQEYK 332
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
+FA DVRL F N YNP +V MA L +FE + I E
Sbjct: 333 DAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKIPIE 379
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 51/92 (55%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
+L+ L KH W F PVD L L DY+TII++PMDL T+K RL +Y E ED
Sbjct: 38 VVLKDLWKHSFSWPFQRPVDAVKLKLPDYYTIIKNPMDLNTIKKRLENKYYAKASECIED 97
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN G D+ +MA+ L K+F K
Sbjct: 98 FNTMFSNCYLYNKPGDDIVLMAQALEKLFMQK 129
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWEL 608
+ M YDEK++LS N+ LP +KL +V II+ R SL + DEIE+D +++ A TL EL
Sbjct: 508 KPMNYDEKRQLSLNINKLPGDKLGRVVHIIQSREPSLSNSNPDEIEIDFETLKASTLREL 567
Query: 609 DRFVT 613
+++V+
Sbjct: 568 EKYVS 572
>gi|441637323|ref|XP_004090057.1| PREDICTED: bromodomain testis-specific protein [Nomascus
leucogenys]
Length = 872
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 64/107 (59%), Gaps = 3/107 (2%)
Query: 372 FKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
+ CS +L++++ KH W F PVDV LGLH+Y+ I+++PMDLGT+K +++ Y+
Sbjct: 200 LRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMDNQEYE 259
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
+FA DVRL F N YNP +V MA L +FE + I E
Sbjct: 260 DAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKIPVE 306
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWEL 608
+ M YDEK++LS N+ LP +KL +V II+ R SL + DEIE+D +++ A TL EL
Sbjct: 435 KPMNYDEKRQLSLNINKLPGDKLGRVVHIIQSREPSLSSSNPDEIEIDFETLKASTLREL 494
Query: 609 DRFVT 613
+++V+
Sbjct: 495 EKYVS 499
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 29/57 (50%)
Query: 413 MDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKW 469
MDL T+K RL +Y E ED F N YN G D+ +MA+ L K+F K
Sbjct: 1 MDLNTIKKRLENKYYAKASECIEDFNTMFSNCYLYNKPGDDIVLMAQALEKLFMQKL 57
>gi|33355659|gb|AAQ16198.1| testis-specific BRDT protein [Homo sapiens]
Length = 960
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 64/107 (59%), Gaps = 3/107 (2%)
Query: 372 FKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
+ CS +L++++ KH W F PVDV LGLH+Y+ ++++PMDLGT+K +++ YK
Sbjct: 286 LRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDVVKNPMDLGTIKEKMDNQEYK 345
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
+FA DVRL F N YNP +V MA L +FE + I E
Sbjct: 346 DAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKIPIE 392
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 51/92 (55%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
+L+ L KH W F PVD L L DY+TII++PMDL T+K RL +Y E ED
Sbjct: 51 VVLKDLWKHSFSWPFQRPVDAVKLKLPDYYTIIKNPMDLNTIKKRLENKYYAKASECIED 110
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN G D+ +MA+ L K+F K
Sbjct: 111 FNTMFSNCYLYNKPGDDIVLMAQALEKLFMQK 142
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWEL 608
+ M YDEK++LS N+ LP +KL +V II+ R SL + DE+E+D +++ A TL EL
Sbjct: 521 KPMNYDEKRQLSLNINKLPGDKLGRVVHIIQSREPSLSNSNPDEMEIDFETLKASTLREL 580
Query: 609 DRFVT 613
+++V+
Sbjct: 581 EKYVS 585
>gi|407043630|gb|EKE42060.1| bromodomain containing protein [Entamoeba nuttalli P19]
Length = 265
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 50/107 (46%), Positives = 68/107 (63%)
Query: 375 CSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFA 434
C +++++LMK VF PVD + + +YF II+ PMDLGTV ++ KN Y S EF+
Sbjct: 69 CMSVMKQLMKVSESEVFMEPVDPEIWNIPNYFDIIKTPMDLGTVIKKIKKNMYYSIDEFS 128
Query: 435 EDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMR 481
DVRLTF NAMT+NP G VH AE+L KIFE+ + E N ++
Sbjct: 129 NDVRLTFTNAMTFNPPGNYVHSYAEKLYKIFENYYRHCIRELNHHLK 175
>gi|357490537|ref|XP_003615556.1| Bromodomain-containing protein [Medicago truncatula]
gi|355516891|gb|AES98514.1| Bromodomain-containing protein [Medicago truncatula]
Length = 322
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 114/241 (47%), Gaps = 39/241 (16%)
Query: 379 LEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL---NKNWYKSPKEFAE 435
++ K K W F PVDV+ LGL+DY+ II PMD T+K R+ + + YK+ +E
Sbjct: 86 FSQIAKDKWAWPFLDPVDVEGLGLYDYYQIIEKPMDFSTIKIRMEAKDGSGYKNVREIYA 145
Query: 436 DVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIES--EYNREMRIGADYEMGFHTP 493
DVRL F NAM YN + DVH+MA+ LL+ FE+ E+ E N+ + A Y
Sbjct: 146 DVRLIFKNAMKYNDEKNDVHVMAKTLLEKFENDLSKEEAHEELNKRLAQEATYA------ 199
Query: 494 TSRKAPPLPPPLDMRRILDRSESITHPMDSRLKPISTTPSSRTPAPKKPKAKDPHKRDMT 553
+M R L S +D L+ + TT S+ R ++
Sbjct: 200 ------------NMTRELSTELS---KVDMALRSLKTTAISQC-------------RKLS 231
Query: 554 YDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWELDRFVT 613
+ EK L+ L + + ++I+K+ N + D + +D+DS TL+ L FV
Sbjct: 232 HPEKLILANAFTKLSPDNIVKALEIVKESNPNFKDRIDMVTLDLDSQSDYTLFRLHMFVK 291
Query: 614 N 614
N
Sbjct: 292 N 292
>gi|67481051|ref|XP_655875.1| bromodomain protein [Entamoeba histolytica HM-1:IMSS]
gi|56473058|gb|EAL50506.1| bromodomain protein, putative [Entamoeba histolytica HM-1:IMSS]
gi|449705918|gb|EMD45867.1| bromo domain containing protein [Entamoeba histolytica KU27]
Length = 265
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 50/107 (46%), Positives = 68/107 (63%)
Query: 375 CSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFA 434
C +++++LMK VF PVD + + +YF II+ PMDLGTV ++ KN Y S EF+
Sbjct: 69 CMSVMKQLMKVSESEVFMEPVDPEIWNIPNYFDIIKTPMDLGTVIKKIKKNMYYSIDEFS 128
Query: 435 EDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMR 481
DVRLTF NAMT+NP G VH AE+L KIFE+ + E N ++
Sbjct: 129 NDVRLTFTNAMTFNPPGNYVHSYAEKLYKIFENYYRHCIRELNHHLK 175
>gi|226493721|ref|NP_001146156.1| uncharacterized protein LOC100279725 [Zea mays]
gi|219885991|gb|ACL53370.1| unknown [Zea mays]
gi|413921106|gb|AFW61038.1| hypothetical protein ZEAMMB73_947765 [Zea mays]
Length = 484
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 50/94 (53%), Positives = 59/94 (62%)
Query: 373 KSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKE 432
K C+ +L +L + K FN+PVDV+ L LHDY IIR PMDLGTVK L Y S +
Sbjct: 140 KRCADILMRLRRSKKSVWFNSPVDVEGLKLHDYRAIIRSPMDLGTVKQNLTAGRYPSHEA 199
Query: 433 FAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFE 466
FA DVRLTF+NA+ YNP VH A LL FE
Sbjct: 200 FAGDVRLTFNNALRYNPPDHHVHRYAGNLLASFE 233
>gi|159164649|pdb|2I8N|A Chain A, Solution Structure Of The Second Bromodomain Of Brd4
Length = 114
Score = 99.8 bits (247), Expect = 4e-18, Method: Composition-based stats.
Identities = 45/98 (45%), Positives = 60/98 (61%), Gaps = 3/98 (3%)
Query: 372 FKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
K CS +L+++ KH W F PVDV+ LGLHDY II+HPMD+ T+K++L Y+
Sbjct: 3 LKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAREYR 62
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFE 466
+EF DVRL F N YNP +V MA +L +FE
Sbjct: 63 DAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFE 100
>gi|224007327|ref|XP_002292623.1| hypothetical protein THAPSDRAFT_269496 [Thalassiosira pseudonana
CCMP1335]
gi|220971485|gb|EED89819.1| hypothetical protein THAPSDRAFT_269496 [Thalassiosira pseudonana
CCMP1335]
Length = 865
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 45/97 (46%), Positives = 61/97 (62%)
Query: 371 IFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSP 430
I + C L+ KL H+HGWVF PVD LG+ DYF I++HPMDL V+T+L YK
Sbjct: 50 ITRKCLPLVRKLYNHEHGWVFKDPVDPVELGIPDYFDIVQHPMDLALVETKLENGVYKDL 109
Query: 431 KEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFED 467
F D +L F NA+ +N + DV MA+QLL +F++
Sbjct: 110 DSFERDTKLVFENAILFNGEKNDVGGMAKQLLFMFDE 146
>gi|345311855|ref|XP_001520339.2| PREDICTED: bromodomain testis-specific protein-like, partial
[Ornithorhynchus anatinus]
Length = 431
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 46/107 (42%), Positives = 64/107 (59%), Gaps = 3/107 (2%)
Query: 372 FKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
K C+ +L++L KH W F PVDV LGLH+Y+ ++++PMDLGT+K ++N YK
Sbjct: 278 LKHCNEILKELFSKKHLSYAWPFYKPVDVTALGLHNYYDVVKNPMDLGTIKKKMNNQNYK 337
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
EFA DVRL F N YNP ++ MA L +FE ++ I E
Sbjct: 338 DAHEFAADVRLMFMNCYKYNPPDHEIVGMARTLQDVFEMQFAKIPDE 384
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 50/92 (54%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
+++ + KH W F PVD L L DY+ II++PMDL T+K RL +Y E ED
Sbjct: 36 VVIKAIWKHSFSWPFQQPVDAVKLRLPDYYRIIKNPMDLSTIKKRLEYKYYVKASECVED 95
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN G D+ +MA+ L K+F K
Sbjct: 96 FNTMFTNCYLYNKPGDDIVLMAQALEKVFLQK 127
>gi|291243780|ref|XP_002741778.1| PREDICTED: bromodomain containing 2-like [Saccoglossus kowalevskii]
Length = 821
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 61/98 (62%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ + KH+ W F+APV+ LGL DYF II++PMDLGT+K RL N+Y S K+ D
Sbjct: 109 VMKAVWKHQFAWPFHAPVNPAELGLPDYFDIIKNPMDLGTIKKRLESNYYYSAKDCISDF 168
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
L F N YN G+DV +MA+ L K+F K + E
Sbjct: 169 NLMFTNCYLYNKPGEDVVLMAQALEKLFLTKVAQMPQE 206
>gi|412988890|emb|CCO15481.1| bromodomain-containing protein [Bathycoccus prasinos]
Length = 947
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 65/112 (58%), Gaps = 4/112 (3%)
Query: 371 IFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSP 430
+ KSC +L + ++K W+F PVD LG+ DY+ I+++PMDLG VK +L+ Y P
Sbjct: 325 LIKSCRDVLNHVKRNKFHWIFTQPVDAVKLGIPDYYEIVKNPMDLGKVKEKLDGKKYTWP 384
Query: 431 KEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRI 482
+FA+D+RL F N YN D M E + FE+ WV +YN E ++
Sbjct: 385 TDFADDMRLIFDNCALYNGTTTDAGQMGETVRGAFEEGWV----KYNVEQKM 432
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 530 TTPSSRTPAPKKPKAKDPH---KRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSL 586
TP S+ +K D R+MT+DEK L+ +LQ LP K + ++ I+++ +++
Sbjct: 546 ATPQSKVTKDRKYIELDQEPLPTREMTFDEKHALTMSLQELPESKQEMVITIVQEGQAAM 605
Query: 587 FQHD-DEIEVDIDSVDAETLWELDRFV 612
+ + DEIE++I+ +D++TLW L R+
Sbjct: 606 GKAEGDEIEINIEELDSKTLWRLQRYC 632
>gi|2554915|gb|AAB87862.1| BRDT [Homo sapiens]
Length = 947
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 63/107 (58%), Gaps = 3/107 (2%)
Query: 372 FKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
+ CS +L++++ KH W F PVDV LGLH+Y+ ++++PMDLGT+K +++ YK
Sbjct: 273 LRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDVVKNPMDLGTIKEKMDNQEYK 332
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
FA DVRL F N YNP +V MA L +FE + I E
Sbjct: 333 DAYSFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKIPIE 379
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 51/92 (55%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
+L+ L KH W F PVD L L DY+TII++PMDL T+K RL +Y E ED
Sbjct: 38 VVLKDLWKHSFSWPFQRPVDAVKLKLPDYYTIIKNPMDLNTIKKRLENKYYAKASECIED 97
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN G D+ +MA+ L K+F K
Sbjct: 98 FNTMFSNCYLYNKPGDDIVLMAQALEKLFMQK 129
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWEL 608
+ M YDEK++LS N+ LP +KL +V II+ R SL + DEIE+D +++ A TL EL
Sbjct: 508 KPMNYDEKRQLSLNINKLPGDKLGRVVHIIQSREPSLSNSNPDEIEIDFETLKASTLREL 567
Query: 609 DRFVT 613
+++V+
Sbjct: 568 EKYVS 572
>gi|332221880|ref|XP_003260091.1| PREDICTED: bromodomain testis-specific protein isoform 3 [Nomascus
leucogenys]
gi|441637320|ref|XP_004090056.1| PREDICTED: bromodomain testis-specific protein [Nomascus
leucogenys]
Length = 899
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 64/107 (59%), Gaps = 3/107 (2%)
Query: 372 FKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
+ CS +L++++ KH W F PVDV LGLH+Y+ I+++PMDLGT+K +++ Y+
Sbjct: 227 LRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMDNQEYE 286
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
+FA DVRL F N YNP +V MA L +FE + I E
Sbjct: 287 DAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKIPVE 333
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWEL 608
+ M YDEK++LS N+ LP +KL +V II+ R SL + DEIE+D +++ A TL EL
Sbjct: 462 KPMNYDEKRQLSLNINKLPGDKLGRVVHIIQSREPSLSSSNPDEIEIDFETLKASTLREL 521
Query: 609 DRFVT 613
+++V+
Sbjct: 522 EKYVS 526
>gi|213512228|ref|NP_001094373.1| bromodomain containing 4 [Rattus norvegicus]
Length = 1403
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 98/205 (47%), Gaps = 26/205 (12%)
Query: 278 VASVGVPV-TRVGITRPSRPLNQLSISTVENSLGLSENVEKEKRTPKANQFYRNSEFLLA 336
+A+ PV T+ G+ R + +I + L+ + K P+ R S
Sbjct: 276 IATTPQPVKTKKGVKRKADTTTPTTIDPIHEPPSLAPEPKTAKLGPR-----RESSR--- 327
Query: 337 KDKFPPAESNKKSKLNGKKQAGNELAHGFGTGSKI---FKSCSALLEKLMKHKH---GWV 390
P + KK + ++ G E SKI K CS +L+++ KH W
Sbjct: 328 -----PVKPPKKDVPDSQQHPGPE------KSSKISEQLKCCSGILKEMFAKKHAAYAWP 376
Query: 391 FNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPK 450
F PVDV+ LGLHDY II+HPMD+ T+K++L Y+ +EF DVRL F N YNP
Sbjct: 377 FYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLESREYRDAQEFGADVRLMFSNCYKYNPP 436
Query: 451 GQDVHIMAEQLLKIFEDKWVVIESE 475
+V MA +L +FE ++ + E
Sbjct: 437 DHEVVAMARKLQDVFEMRFAKMPDE 461
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 60/107 (56%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+L+ L KH+ W F PVD L L DY+ II+ PMD+GT+K RL N+Y + +E +D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGA 484
F N YN G D+ +MAE L K+F K + +E M + A
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEETEIMIVQA 176
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 51/79 (64%), Gaps = 5/79 (6%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLF-QHDDEIEVDIDSVDAETLWEL 608
+ M+Y+EK++LS ++ LP EKL +V II+ R SL + DEIE+D +++ TL EL
Sbjct: 609 KPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLREL 668
Query: 609 DRFVTNYKKSLSKNKRKAE 627
+R+VT S + KRK +
Sbjct: 669 ERYVT----SCLRKKRKPQ 683
>gi|183396808|ref|NP_001116861.1| bromodomain containing 3a [Danio rerio]
Length = 683
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 48/118 (40%), Positives = 67/118 (56%), Gaps = 5/118 (4%)
Query: 363 HGFGTG--SKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGT 417
HG G S+ K C +L++++ KH W F PVD + L LHDY II+HPMDL T
Sbjct: 285 HGGKKGRLSEQLKYCDVILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLST 344
Query: 418 VKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
VK +++ Y+ + FA DVRL F N YNP +V MA +L +FE ++ + E
Sbjct: 345 VKKKMDSREYQDAQTFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE 402
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 55/98 (56%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD LGL DY II++PMD+GT+K RL +Y S E +D
Sbjct: 42 VVKTLWKHQFAWPFYQPVDAVKLGLPDYHKIIKNPMDMGTIKKRLESVYYYSASECMQDF 101
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
F N YN D+ +MA+ L KIF K ++ E
Sbjct: 102 NTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVALMPQE 139
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 49/75 (65%), Gaps = 4/75 (5%)
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWELDR 610
MTYDEK++LS ++ LP EKL +V II+ R SL + DEIE+D +++ TL EL+R
Sbjct: 575 MTYDEKRQLSLDINRLPGEKLGRVVHIIQSREPSLRDSNPDEIEIDFETLKPSTLRELER 634
Query: 611 FVTNYKKSLSKNKRK 625
+V K L K +RK
Sbjct: 635 YV---KSCLQKKQRK 646
>gi|32564850|ref|NP_871879.1| Protein BET-1, isoform b [Caenorhabditis elegans]
gi|351060598|emb|CCD68304.1| Protein BET-1, isoform b [Caenorhabditis elegans]
Length = 765
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 101/220 (45%), Gaps = 49/220 (22%)
Query: 372 FKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
K C LL K+ W FN PVD + LGLHDY II+ PMDL ++K ++ YK
Sbjct: 263 MKPCLKLLNDFSTKKYQEFAWPFNEPVDAEQLGLHDYHKIIKEPMDLKSMKAKMESGAYK 322
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEM 488
P +F DVRL N YNP G VH + ++F+ +W E+
Sbjct: 323 EPSDFEHDVRLMLRNCFLYNPVGDPVHSFGLRFQEVFDRRWA----------------EL 366
Query: 489 GFHTPTSRKAPPLPPPLDMRRILDRSESITHPMDSRLKPISTTPS-SRTPAPKKPK-AKD 546
G + R+ S+ P + PI+ TP +++ APK+PK ++
Sbjct: 367 GDSS-------------------SRASSVA-PQSA---PIAPTPKVAKSSAPKEPKESRK 403
Query: 547 PHKRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSL 586
HK++ T++ S +L +++N + +I++R L
Sbjct: 404 EHKKETTFEASGAKSEDLM-----QINNALSMIREREEKL 438
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 50/91 (54%)
Query: 376 SALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAE 435
+ +L++ KHKH W F PVD L + Y + PMDL T++ RL +Y +E +
Sbjct: 49 TTVLKEAGKHKHVWPFQKPVDAVALCIPLYHERVARPMDLKTIENRLKSTYYTCAQECID 108
Query: 436 DVRLTFHNAMTYNPKGQDVHIMAEQLLKIFE 466
D+ F N T+N K DV IMA+ + ++ +
Sbjct: 109 DIETVFQNCYTFNGKEDDVTIMAQNVHEVIK 139
Score = 47.4 bits (111), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 43/68 (63%), Gaps = 4/68 (5%)
Query: 549 KRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRN-SSLFQH---DDEIEVDIDSVDAET 604
K +TY+EK+ LS + +LP+ +L+ I+ II++R S+L Q D E+E+D +S+
Sbjct: 523 KMALTYEEKRNLSNLINNLPNNQLNTIISIIQRRERSALMQQQLDDSEVELDFESLGDMC 582
Query: 605 LWELDRFV 612
L E+ F+
Sbjct: 583 LREMGAFI 590
>gi|308198663|pdb|3ONI|A Chain A, Crystal Structure Of The Second Bromodomain Of Human Brd2
In Complex With The Inhibitor Jq1
Length = 114
Score = 99.4 bits (246), Expect = 6e-18, Method: Composition-based stats.
Identities = 49/107 (45%), Positives = 64/107 (59%), Gaps = 3/107 (2%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G S+ K C+ +L++L+ KH W F PVD LGLHDY II+HPMDL TVK ++
Sbjct: 3 GKLSEQLKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKM 62
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKW 469
Y+ +EFA DVRL F N YNP DV MA +L +FE ++
Sbjct: 63 ENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRY 109
>gi|1313926|emb|CAA66267.1| non intermediate filament IFA binding protein [Brassica oleracea
var. botrytis]
Length = 165
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 53/103 (51%), Positives = 67/103 (65%), Gaps = 1/103 (0%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWELD 609
RD+T DEK++LS LQ LP +KL+ +VQIIKK N L Q DDEIE+DIDSVD +TLWEL
Sbjct: 6 RDLTMDEKRRLSEELQDLPYDKLETVVQIIKKSNPELSQQDDEIELDIDSVDIQTLWELY 65
Query: 610 RFVTNYKKSLSKNKRKAELANQARAVAQQN-VQQQTPAPVVTE 651
RFV YK+ LS K ++ A + N +Q+ T TE
Sbjct: 66 RFVIGYKEGLSNKKEDQGFGSERDAESVHNSIQEPTTLATGTE 108
>gi|157834826|pdb|2DVV|A Chain A, Crystal Structure Of The Second Bromodomain Of The Human
Brd2 Protein
gi|162329881|pdb|2E3K|A Chain A, Crystal Structure Of The Human Brd2 Second Bromodomain In
Complexed With The Acetylated Histone H4 Peptide
gi|162329882|pdb|2E3K|B Chain B, Crystal Structure Of The Human Brd2 Second Bromodomain In
Complexed With The Acetylated Histone H4 Peptide
gi|162329883|pdb|2E3K|C Chain C, Crystal Structure Of The Human Brd2 Second Bromodomain In
Complexed With The Acetylated Histone H4 Peptide
gi|162329884|pdb|2E3K|D Chain D, Crystal Structure Of The Human Brd2 Second Bromodomain In
Complexed With The Acetylated Histone H4 Peptide
Length = 112
Score = 99.4 bits (246), Expect = 6e-18, Method: Composition-based stats.
Identities = 48/107 (44%), Positives = 64/107 (59%), Gaps = 3/107 (2%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G+ + K C+ +L++L+ KH W F PVD LGLHDY II+HPMDL TVK ++
Sbjct: 1 GSHMEQLKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKM 60
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKW 469
Y+ +EFA DVRL F N YNP DV MA +L +FE ++
Sbjct: 61 ENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRY 107
>gi|345306075|ref|XP_001505872.2| PREDICTED: bromodomain-containing protein 3 [Ornithorhynchus
anatinus]
Length = 724
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 66/113 (58%), Gaps = 3/113 (2%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G S+ K C ++L++++ KH W F PVD + L LHDY II+HPMDL TVK ++
Sbjct: 302 GKLSEHLKYCDSILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKM 361
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
+ Y+ + FA D+RL F N YNP +V MA +L +FE ++ + E
Sbjct: 362 DSREYQDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE 414
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 52/91 (57%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD L L DY II++PMD+GT+K RL N+Y S E +D
Sbjct: 42 VVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDF 101
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN D+ +MA+ L KIF K
Sbjct: 102 NTMFTNCYIYNKPTDDIVLMAQALEKIFLQK 132
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 61/105 (58%), Gaps = 11/105 (10%)
Query: 529 STTPSSRTPAPKKPKAKDPHKRD-------MTYDEKQKLSTNLQSLPSEKLDNIVQIIKK 581
STTP+SR P +A + D MTYDEK++LS ++ LP EKL +V II+
Sbjct: 540 STTPASRQPKKGGKQASATYDSDEEEEGLPMTYDEKRQLSLDINRLPGEKLGRVVHIIQS 599
Query: 582 RNSSLFQHD-DEIEVDIDSVDAETLWELDRFVTNYKKSLSKNKRK 625
R SL + DEIE+D +++ TL EL+R+V K L K +RK
Sbjct: 600 REPSLRDSNPDEIEIDFETLKPTTLRELERYV---KSCLQKKQRK 641
>gi|298706226|emb|CBJ29267.1| Zinc finger, TAZ-type [Ectocarpus siliculosus]
Length = 1079
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 60/95 (63%), Gaps = 3/95 (3%)
Query: 378 LLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFA 434
+L KLM G +FN PVD LG+ DYF + HPMDLGT+K+RL Y +P+EFA
Sbjct: 604 ILTKLMSSGTGPQRGLFNVPVDPLKLGIPDYFKRVPHPMDLGTIKSRLLSMSYTTPEEFA 663
Query: 435 EDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKW 469
DVRL F NA+ +NP+ VH A QLL F+ ++
Sbjct: 664 SDVRLVFKNAIGFNPETHFVHTWAVQLLNEFDQEY 698
>gi|332221876|ref|XP_003260089.1| PREDICTED: bromodomain testis-specific protein isoform 1 [Nomascus
leucogenys]
gi|332221878|ref|XP_003260090.1| PREDICTED: bromodomain testis-specific protein isoform 2 [Nomascus
leucogenys]
gi|441637315|ref|XP_004090055.1| PREDICTED: bromodomain testis-specific protein [Nomascus
leucogenys]
Length = 945
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 64/107 (59%), Gaps = 3/107 (2%)
Query: 372 FKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
+ CS +L++++ KH W F PVDV LGLH+Y+ I+++PMDLGT+K +++ Y+
Sbjct: 273 LRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMDNQEYE 332
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
+FA DVRL F N YNP +V MA L +FE + I E
Sbjct: 333 DAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKIPVE 379
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 51/92 (55%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
+L+ L KH W F PVD L L DY+TII++PMDL T+K RL +Y E ED
Sbjct: 38 VVLKDLWKHSFSWPFQRPVDAVKLKLPDYYTIIKNPMDLNTIKKRLENKYYAKASECIED 97
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN G D+ +MA+ L K+F K
Sbjct: 98 FNTMFSNCYLYNKPGDDIVLMAQALEKLFMQK 129
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWEL 608
+ M YDEK++LS N+ LP +KL +V II+ R SL + DEIE+D +++ A TL EL
Sbjct: 508 KPMNYDEKRQLSLNINKLPGDKLGRVVHIIQSREPSLSSSNPDEIEIDFETLKASTLREL 567
Query: 609 DRFVT 613
+++V+
Sbjct: 568 EKYVS 572
>gi|413921105|gb|AFW61037.1| hypothetical protein ZEAMMB73_947765 [Zea mays]
Length = 429
Score = 99.4 bits (246), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 65/84 (77%)
Query: 541 KPKAKDPHKRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSV 600
KPKA++P+KR+M +EKQKL +++LP EK+ N++QI++KRNS + +E+D D +
Sbjct: 285 KPKAREPNKREMDEEEKQKLRVEIENLPEEKMLNVLQIVQKRNSDPAFTGEVVELDFDEL 344
Query: 601 DAETLWELDRFVTNYKKSLSKNKR 624
D ETLWELDRFV N++K+L K++R
Sbjct: 345 DMETLWELDRFVVNWRKALKKSQR 368
>gi|432910838|ref|XP_004078550.1| PREDICTED: bromodomain-containing protein 2-like [Oryzias latipes]
Length = 830
Score = 99.4 bits (246), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 48/117 (41%), Positives = 64/117 (54%), Gaps = 3/117 (2%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G S + CS LL+ ++ KH W F PVD LGLHDY II+ PMDL T+K ++
Sbjct: 380 GKLSPPLRYCSGLLKDMLSKKHAAYAWPFYTPVDAAALGLHDYHDIIKCPMDLSTIKRKM 439
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNRE 479
+ Y+ ++FA DVRL F N YNP DV MA +L +FE + + E E
Sbjct: 440 DCREYRDAQQFASDVRLMFSNCYKYNPPDHDVVGMARKLQDVFEFSFAKMPDEPQME 496
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 54/91 (59%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
L++ L +H+ W F+ PVD L L DY+ II+ PMD+GT+K RL ++Y+S E +D
Sbjct: 96 LMKCLWRHEFAWPFHEPVDAYRLKLPDYYKIIKQPMDMGTIKKRLENSFYRSASECIQDF 155
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN D+ +MA+ L KIF K
Sbjct: 156 NTMFTNCYIYNKPKDDIVLMAQSLEKIFLQK 186
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 71/150 (47%), Gaps = 28/150 (18%)
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQ-HDDEIEVDIDSVDAETLWELDR 610
MTYDEK++LS ++ LP EKL +V II+ R SL + +EIE+D +++ TL EL+R
Sbjct: 671 MTYDEKRQLSLDINKLPGEKLGRVVHIIQSREPSLRDTNPEEIEIDFETLKPSTLKELER 730
Query: 611 FVTNYKKSLSKNKRKAELANQARAVAQQNVQQQTPAPVVTEVRKEI--RTDDRIG----- 663
+V L K RK A + +V + + E R+E+ R D G
Sbjct: 731 YVMT---CLRKKPRKLYGAKKG-SVGMSKEE------LTLEKRRELEKRLQDVSGQLNSV 780
Query: 664 ---------STSSP-VQVEKQVDNGSRSSS 683
S+P + +GS SSS
Sbjct: 781 KKPAKPKAEKPSAPEAHSQPSRLSGSSSSS 810
>gi|195999880|ref|XP_002109808.1| hypothetical protein TRIADDRAFT_20501 [Trichoplax adhaerens]
gi|190587932|gb|EDV27974.1| hypothetical protein TRIADDRAFT_20501, partial [Trichoplax
adhaerens]
Length = 470
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 49/101 (48%), Positives = 62/101 (61%), Gaps = 3/101 (2%)
Query: 378 LLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFA 434
+L++LM KH W F PV+ + LGL DY+ II+HPMDLGTVK + K YK+ EFA
Sbjct: 158 VLKELMLKKHRAYAWPFYEPVNAEKLGLTDYYEIIKHPMDLGTVKDKFEKLEYKAINEFA 217
Query: 435 EDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
DVRL F N YNP D+ MA +L +FE K+ I E
Sbjct: 218 ADVRLIFTNCYKYNPSDHDIVNMARRLQDVFEFKYAQIPDE 258
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 59/103 (57%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN 425
G + + +++ L KH++ W F PVD L L DYF II+ PMDLGT+K +L
Sbjct: 1 GRDTNQLRFLKTVIDGLWKHRYAWPFRQPVDPVKLQLPDYFKIIKKPMDLGTIKRKLEGK 60
Query: 426 WYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
Y S KE +D+ TF N TYN D+ +M E+L K+++ K
Sbjct: 61 MYHSAKECMDDILRTFTNCYTYNKTSDDIVLMCEELEKVYKKK 103
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 79/139 (56%), Gaps = 23/139 (16%)
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAE-----TL 605
MTYDEK++LS ++ LP +KL +V II+ R +L + + +EIE+ D E TL
Sbjct: 311 MTYDEKRQLSLDINKLPGDKLGRVVHIIQSREPALRESNPEEIEI-----DFETLKPSTL 365
Query: 606 WELDRFVTNYKKSLSKNKRKAELANQARAVAQQNVQQQTPAPVVTEVRKEIR-TDDRIGS 664
EL+R+V + +L + KR + + +++ +++ E+ + ++ DR+GS
Sbjct: 366 RELERYVQS---TLKRQKRPSVKKADPVVLGKEHAKKK------EELERRLQDVSDRLGS 416
Query: 665 TSSPVQVEKQVD-NGSRSS 682
+ P++ +K +D GSR++
Sbjct: 417 -APPIKRKKVIDVVGSRAA 434
>gi|334185931|ref|NP_001190072.1| transcription factor GTE6 [Arabidopsis thaliana]
gi|332645405|gb|AEE78926.1| transcription factor GTE6 [Arabidopsis thaliana]
Length = 386
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 114/257 (44%), Gaps = 41/257 (15%)
Query: 371 IFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL---NKNWY 427
+ + + ++ +HK W F PV+V+ LGLHDYF +I PMD T+K ++ + Y
Sbjct: 111 LMRQFGTIFRQITQHKCAWPFMHPVNVEGLGLHDYFEVIDKPMDFSTIKNQMEAKDGTGY 170
Query: 428 KSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYE 487
K + D+RL F NAM YN + DV+ MA++LL+ FE+KW
Sbjct: 171 KHVMQIYADMRLVFENAMNYNEETSDVYSMAKKLLEKFEEKW------------------ 212
Query: 488 MGFHTPTSRKAPPLPPPLDMRRILDRSESITHPMDSRLKPISTTPSSRTPAPKKPKAKDP 547
A LP + +I + E K S ++R + A D
Sbjct: 213 ----------AHFLPKVQEEEKIREEEEKQAAKEALLAKEASHIKTTRELGNEICHANDE 262
Query: 548 HKRDM----------TYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDI 597
++ M T +EK+ + L L + L ++ I+ + N S +E+ +++
Sbjct: 263 LEKLMRKVVERCRKITIEEKRNIGLALLKLSPDDLQKVLGIVAQANPSFQPRAEEVSIEM 322
Query: 598 DSVDAETLWELDRFVTN 614
D +D TLW L FV +
Sbjct: 323 DILDEPTLWRLKFFVKD 339
>gi|224473811|gb|ACN49152.1| bromodomain containing 2 [Oryzias dancena]
Length = 826
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 60/98 (61%), Gaps = 3/98 (3%)
Query: 372 FKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
+ CS +L++L+ KH W F PVD +LGLHDY II+ PMDL T+K +++ Y+
Sbjct: 392 LRYCSGVLKELLSKKHAAYAWPFYKPVDAVSLGLHDYHEIIKQPMDLSTIKRKMDSREYR 451
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFE 466
++F+ DVRL F N YNP DV MA +L +FE
Sbjct: 452 DAQQFSADVRLMFSNCYKYNPPDHDVVAMARKLQDVFE 489
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 55/106 (51%), Gaps = 1/106 (0%)
Query: 363 HGFGTGSKIFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
HG T F +L+ L +H W F+ PVD L L DY II+ PMD+GT+K RL
Sbjct: 71 HGRMTNQLQFLQ-KVVLKSLWRHHFAWPFHEPVDAVKLSLPDYHKIIKTPMDMGTIKKRL 129
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
N+Y+S E +D F N YN D+ +MA+ L K F K
Sbjct: 130 ENNYYRSASECMQDFNAMFTNCYIYNKPTDDIVLMAQSLEKAFLQK 175
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 50/81 (61%), Gaps = 4/81 (4%)
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQ-HDDEIEVDIDSVDAETLWELDR 610
M+YDEK++LS ++ LP EKL +V II+ R SL + +EIE+D +++ TL EL+R
Sbjct: 668 MSYDEKRQLSLDINKLPGEKLGRVVYIIQSREPSLRDTNPEEIEIDFETLKPSTLRELER 727
Query: 611 FVTNYKKSLSKNKRKAELANQ 631
+V L K RK ++ +
Sbjct: 728 YVMT---CLRKKPRKPYVSTK 745
>gi|291230216|ref|XP_002735064.1| PREDICTED: bromodomain-containing protein 4-like, partial
[Saccoglossus kowalevskii]
Length = 597
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 55/138 (39%), Positives = 72/138 (52%), Gaps = 7/138 (5%)
Query: 344 ESNKKSKLNGKKQAGNELAHGFGTGSKI---FKSCSALLEKLMKHKH---GWVFNAPVDV 397
ES +K K KK + H G K+ K C+ ++++L KH W F PVD
Sbjct: 121 ESGRKIK-PPKKDLPDAAQHSKGKKEKLSVQLKYCNGIIKELYSKKHSGYAWPFYKPVDA 179
Query: 398 KNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIM 457
LGLHDY II++PMDLGTVK +L Y + + A DVR F N YNP DV M
Sbjct: 180 NLLGLHDYHDIIKYPMDLGTVKRKLETRDYTNANDIAADVRAIFTNCYKYNPPDHDVVAM 239
Query: 458 AEQLLKIFEDKWVVIESE 475
A +L +FE K+ + E
Sbjct: 240 ARKLQDVFEMKFAKMPDE 257
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 49/77 (63%), Gaps = 4/77 (5%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWEL 608
+ M+YDEK++LS ++ LP +KL +V II+ R SL + DEIE+D +++ TL EL
Sbjct: 428 KPMSYDEKRQLSLDINKLPGDKLGRVVHIIQAREPSLRDSNPDEIEIDFETLKPSTLREL 487
Query: 609 DRFVTNYKKSLSKNKRK 625
+R+V + L K RK
Sbjct: 488 ERYVM---QCLRKKPRK 501
>gi|149034726|gb|EDL89463.1| bromodomain containing 4, isoform CRA_b [Rattus norvegicus]
Length = 723
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 98/202 (48%), Gaps = 20/202 (9%)
Query: 278 VASVGVPV-TRVGITRPSRPLNQLSISTVENSLGLSENVEKEKRTPKANQFYRNSEFLLA 336
+A+ PV T+ G+ R + +I + L+ + K P+ R S
Sbjct: 276 IATTPQPVKTKKGVKRKADTTTPTTIDPIHEPPSLAPEPKTAKLGPR-----RESSR--- 327
Query: 337 KDKFPPAESNKKSKLNGKKQAGNELAHGFGTGSKIFKSCSALLEKLMKHKH---GWVFNA 393
P + KK + ++ G E + S+ K CS +L+++ KH W F
Sbjct: 328 -----PVKPPKKDVPDSQQHPGPEKSSKI---SEQLKCCSGILKEMFAKKHAAYAWPFYK 379
Query: 394 PVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQD 453
PVDV+ LGLHDY II+HPMD+ T+K++L Y+ +EF DVRL F N YNP +
Sbjct: 380 PVDVEALGLHDYCDIIKHPMDMSTIKSKLESREYRDAQEFGADVRLMFSNCYKYNPPDHE 439
Query: 454 VHIMAEQLLKIFEDKWVVIESE 475
V MA +L +FE ++ + E
Sbjct: 440 VVAMARKLQDVFEMRFAKMPDE 461
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 60/108 (55%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
+L+ L KH+ W F PVD L L DY+ II+ PMD+GT+K RL N+Y + +E +D
Sbjct: 69 VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQD 128
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGA 484
F N YN G D+ +MAE L K+F K + +E M + A
Sbjct: 129 FNTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEETEIMIVQA 176
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 51/79 (64%), Gaps = 5/79 (6%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLF-QHDDEIEVDIDSVDAETLWEL 608
+ M+Y+EK++LS ++ LP EKL +V II+ R SL + DEIE+D +++ TL EL
Sbjct: 609 KPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLREL 668
Query: 609 DRFVTNYKKSLSKNKRKAE 627
+R+VT S + KRK +
Sbjct: 669 ERYVT----SCLRKKRKPQ 683
>gi|397609097|gb|EJK60217.1| hypothetical protein THAOC_19472 [Thalassiosira oceanica]
Length = 1735
Score = 99.0 bits (245), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 64/101 (63%)
Query: 369 SKIFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
S++ C +L+ L H++GWVF+ PV+ LGL DYF II+ PMDLGT+ +L + Y
Sbjct: 855 SELKSKCGEILKSLQNHENGWVFSTPVNPVELGLDDYFDIIKKPMDLGTIGKKLEQGSYH 914
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKW 469
S EF DVRLTF NAM YN + VH MA+ K F++ +
Sbjct: 915 SFDEFKSDVRLTFENAMKYNEEQTVVHEMAKGFKKKFDEDY 955
>gi|116283260|gb|AAH05281.1| BRDT protein [Homo sapiens]
Length = 465
Score = 99.0 bits (245), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 61/98 (62%), Gaps = 3/98 (3%)
Query: 372 FKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
+ CS +L++++ KH W F PVDV LGLH+Y+ ++++PMDLGT+K +++ YK
Sbjct: 273 LRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDVVKNPMDLGTIKEKMDNQEYK 332
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFE 466
+FA DVRL F N YNP +V MA L +FE
Sbjct: 333 DAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFE 370
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 50/92 (54%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
+L+ L KH W F PVD L L DY+TII++ MDL T+K RL +Y E ED
Sbjct: 38 VVLKDLWKHSFSWPFQRPVDAVKLKLPDYYTIIKNSMDLNTIKKRLENKYYAKASECIED 97
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN G D+ +MA+ L K+F K
Sbjct: 98 FNTMFSNCYLYNKPGDDIVLMAQALEKLFMQK 129
>gi|395854578|ref|XP_003799760.1| PREDICTED: LOW QUALITY PROTEIN: bromodomain testis-specific
protein-like [Otolemur garnettii]
Length = 773
Score = 99.0 bits (245), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 75/143 (52%), Gaps = 11/143 (7%)
Query: 339 KFPPAESNKKSKLNGKKQAGNELAHGFGTGSKI---FKSCSALLEKLMKHKH---GWVFN 392
+ PP + N ++ L +Q N G K+ + CS +L++++ KH W F
Sbjct: 172 RMPPIKENAQNVLPDSQQQYN-----VGKSVKVTEQLRHCSEILKEMLAKKHFSYAWPFY 226
Query: 393 APVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQ 452
VDV LGLH+Y I++HPMDLGT+K +++ YK EFA DVRL N YNP
Sbjct: 227 NSVDVNALGLHNYXDIVKHPMDLGTIKWKMDNQEYKDAYEFAADVRLMLMNCYKYNPPDH 286
Query: 453 DVHIMAEQLLKIFEDKWVVIESE 475
+V M + L +FE + I E
Sbjct: 287 EVVTMTKMLQDVFEMHFXKIPDE 309
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Query: 554 YDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWELDRFV 612
YDEK++LS ++ LP +KL +V I + R SL + DEIE+D +++ A TL EL+++V
Sbjct: 442 YDEKRQLSLDINKLPGDKLGPVVHITQSREPSLRNSNPDEIEIDFETLKASTLRELEKYV 501
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 27/53 (50%)
Query: 413 MDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIF 465
MDL T+K L +Y E ED+ F N YN D+ +MA+ L K+F
Sbjct: 1 MDLNTIKKHLENKYYVKASECIEDLNTMFSNCYLYNKPXDDIVLMAQTLKKLF 53
>gi|28839607|gb|AAH47900.1| BRDT protein, partial [Homo sapiens]
Length = 463
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 61/98 (62%), Gaps = 3/98 (3%)
Query: 372 FKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
+ CS +L++++ KH W F PVDV LGLH+Y+ ++++PMDLGT+K +++ YK
Sbjct: 273 LRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDVVKNPMDLGTIKEKMDNQEYK 332
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFE 466
+FA DVRL F N YNP +V MA L +FE
Sbjct: 333 DAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFE 370
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 51/92 (55%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
+L+ L KH W F PVD L L DY+TII++PMDL T+K RL +Y E ED
Sbjct: 38 VVLKDLWKHSFSWPFQRPVDAVKLQLPDYYTIIKNPMDLNTIKKRLENKYYAKASECIED 97
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN G D+ +MA+ L K+F K
Sbjct: 98 FNTMFSNCYLYNKPGDDIVLMAQALEKLFMQK 129
>gi|62020593|gb|AAH17582.1| BRDT protein, partial [Homo sapiens]
Length = 462
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 61/98 (62%), Gaps = 3/98 (3%)
Query: 372 FKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
+ CS +L++++ KH W F PVDV LGLH+Y+ ++++PMDLGT+K +++ YK
Sbjct: 273 LRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDVVKNPMDLGTIKEKMDNQEYK 332
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFE 466
+FA DVRL F N YNP +V MA L +FE
Sbjct: 333 DAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFE 370
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 51/92 (55%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
+L+ L KH W F PVD L L DY+TII++PMDL T+K RL +Y E ED
Sbjct: 38 VVLKDLWKHSFSWPFQRPVDAVKLKLPDYYTIIKNPMDLNTIKKRLENKYYAKASECIED 97
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN G D+ +MA+ L K+F K
Sbjct: 98 FNTMFSNCYLYNKPGDDIVLMAQALEKLFMQK 129
>gi|224013794|ref|XP_002296561.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220968913|gb|EED87257.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 89
Score = 98.6 bits (244), Expect = 1e-17, Method: Composition-based stats.
Identities = 49/88 (55%), Positives = 59/88 (67%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
LL+ L H HGWVFN+PVD LGL DYF +I++PMDLGTVK RL Y+S E D+
Sbjct: 2 LLKGLSNHNHGWVFNSPVDPVELGLPDYFEVIKNPMDLGTVKKRLENGLYRSINEVEVDI 61
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIF 465
LTF NAM YNP+G V MA++L F
Sbjct: 62 NLTFDNAMLYNPEGSVVWSMAKELKDKF 89
>gi|126297864|ref|XP_001365890.1| PREDICTED: bromodomain-containing protein 3 [Monodelphis domestica]
Length = 724
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 64/107 (59%), Gaps = 3/107 (2%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G S+ K C ++L++++ KH W F PVD + L LHDY II+HPMDL TVK ++
Sbjct: 302 GKLSEHLKYCDSILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKM 361
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKW 469
+ Y+ + FA D+RL F N YNP +V MA +L +FE ++
Sbjct: 362 DSREYQDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRF 408
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 52/91 (57%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD L L DY II++PMD+GT+K RL N+Y S E +D
Sbjct: 42 VVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDF 101
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN D+ +MA+ L KIF K
Sbjct: 102 NTMFTNCYIYNKPTDDIVLMAQALEKIFLQK 132
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 49/75 (65%), Gaps = 4/75 (5%)
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWELDR 610
MTYDEK++LS ++ LP EKL +V II+ R SL + DEIE+D +++ TL EL+R
Sbjct: 570 MTYDEKRQLSLDINRLPGEKLGRVVHIIQSREPSLRDSNPDEIEIDFETLKPTTLRELER 629
Query: 611 FVTNYKKSLSKNKRK 625
+V K L K +RK
Sbjct: 630 YV---KSCLQKKQRK 641
>gi|159164570|pdb|2G4A|A Chain A, Solution Structure Of A Bromodomain From Ring3 Protein
Length = 116
Score = 98.6 bits (244), Expect = 1e-17, Method: Composition-based stats.
Identities = 47/101 (46%), Positives = 61/101 (60%), Gaps = 3/101 (2%)
Query: 372 FKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
K C+ +L++L+ KH W F PVD LGLHDY II+HPMDL TVK ++ Y+
Sbjct: 3 LKHCNVILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 62
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKW 469
+EFA DVRL F N YNP DV MA +L +FE ++
Sbjct: 63 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRY 103
>gi|308498241|ref|XP_003111307.1| CRE-BET-1 protein [Caenorhabditis remanei]
gi|308240855|gb|EFO84807.1| CRE-BET-1 protein [Caenorhabditis remanei]
Length = 856
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 68/135 (50%), Gaps = 13/135 (9%)
Query: 372 FKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
K CS LL + K+ W F+ PV+ LGLHDY II+ PMD+ T+K +L YK
Sbjct: 247 LKPCSKLLSEFFSKKYNEFTWPFHDPVNAAELGLHDYHKIIKEPMDMKTIKRKLECGEYK 306
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEM 488
P +F D+RL +N YNP G VH ++ ++F+ +W + +R +
Sbjct: 307 EPADFERDIRLMLNNCFIYNPIGDPVHNFGKKFEEVFDKRWAEMGDANSRASSVA----- 361
Query: 489 GFHTPTSRKAPPLPP 503
P S A PLPP
Sbjct: 362 ----PQSAPA-PLPP 371
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 52/91 (57%)
Query: 376 SALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAE 435
+ +L++ KHKH W F PVD L + Y + PMDL T+++RL +Y +E +
Sbjct: 49 TTVLKEAAKHKHVWPFQKPVDAVTLCIPLYHERVLRPMDLKTIESRLKSTYYTCAQECID 108
Query: 436 DVRLTFHNAMTYNPKGQDVHIMAEQLLKIFE 466
D+ F+N T+N K DV IMA+ + ++ +
Sbjct: 109 DIETVFNNCYTFNGKEDDVTIMAQNVHEVIK 139
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQH----DDEIEVDIDSVDAETLWE 607
+TYDEK+ LS + LP+ +L I+ II++R S D EIE+D +S+ L E
Sbjct: 519 LTYDEKRNLSHMVNRLPAPQLSTIISIIQRRECSALTQQSIDDSEIELDFESLGDMCLRE 578
Query: 608 LDRFV 612
+ F+
Sbjct: 579 MAAFM 583
>gi|38541875|gb|AAH62700.1| BRDT protein, partial [Homo sapiens]
Length = 464
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 61/98 (62%), Gaps = 3/98 (3%)
Query: 372 FKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
+ CS +L++++ KH W F PVDV LGLH+Y+ ++++PMDLGT+K +++ YK
Sbjct: 273 LRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDVVKNPMDLGTIKEKMDNQEYK 332
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFE 466
+FA DVRL F N YNP +V MA L +FE
Sbjct: 333 DAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFE 370
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 50/92 (54%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
+L+ L KH W F PVD L L DY+TII++PMDL T+ RL +Y E ED
Sbjct: 38 VVLKDLWKHSFSWPFQRPVDAVKLKLPDYYTIIKNPMDLNTIIKRLENKYYAKASECIED 97
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN G D+ +MA+ L K+F K
Sbjct: 98 FNTMFSNCYLYNKPGDDIVLMAQALEKLFMQK 129
>gi|395506368|ref|XP_003757505.1| PREDICTED: bromodomain-containing protein 3 [Sarcophilus harrisii]
Length = 724
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 64/107 (59%), Gaps = 3/107 (2%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G S+ K C ++L++++ KH W F PVD + L LHDY II+HPMDL TVK ++
Sbjct: 302 GKLSEHLKYCDSILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKM 361
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKW 469
+ Y+ + FA D+RL F N YNP +V MA +L +FE ++
Sbjct: 362 DSREYQDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRF 408
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 52/91 (57%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD L L DY II++PMD+GT+K RL N+Y S E +D
Sbjct: 42 VVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDF 101
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN D+ +MA+ L KIF K
Sbjct: 102 NTMFTNCYIYNKPTDDIVLMAQALEKIFLQK 132
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 49/75 (65%), Gaps = 4/75 (5%)
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWELDR 610
MTYDEK++LS ++ LP EKL +V II+ R SL + DEIE+D +++ TL EL+R
Sbjct: 570 MTYDEKRQLSLDINRLPGEKLGRVVHIIQSREPSLRDSNPDEIEIDFETLKPTTLRELER 629
Query: 611 FVTNYKKSLSKNKRK 625
+V K L K +RK
Sbjct: 630 YV---KSCLQKKQRK 641
>gi|324500947|gb|ADY40429.1| Bromodomain-containing protein 2 [Ascaris suum]
Length = 976
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 63/115 (54%), Gaps = 4/115 (3%)
Query: 359 NELAHGF-GTGSKIFKSCSALLEKLMKHK---HGWVFNAPVDVKNLGLHDYFTIIRHPMD 414
N+L F G ++ K C ++ +L K W F PVDV+ L LHDY+ I++ PMD
Sbjct: 159 NQLKPRFKGKWTEQMKYCQRIISELFSKKCKSFTWPFLEPVDVEGLKLHDYYDIVKQPMD 218
Query: 415 LGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKW 469
LGT++ ++ Y SP+E ED+ L N YNP VH + L K FE+KW
Sbjct: 219 LGTIRRKMEAKQYASPEEMREDLLLVCENCFKYNPPSDPVHQHGKTLQKYFEEKW 273
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 61/119 (51%), Gaps = 20/119 (16%)
Query: 523 SRLKPISTTPSSRTPAPKKPKAKDPHKR----------------DMTYDEKQKLSTNLQS 566
S+ KP T P+ +T P + + P +R M+YDEK++LS ++
Sbjct: 543 SKNKPK-TEPAQQTAPPPVVQHQPPPRRVREDYDFDSEDERSAEPMSYDEKRQLSLDINK 601
Query: 567 LPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWELDRFVTNYKKSLSKNKRK 625
LP +KL ++V II+ R + + +EIE+D +++ TL EL+ FV L K RK
Sbjct: 602 LPGDKLSSVVSIIESREALRDFNPEEIEIDFETLKPTTLRELEAFVAA---CLKKKPRK 657
>gi|449478032|ref|XP_002199360.2| PREDICTED: bromodomain-containing protein 3 [Taeniopygia guttata]
Length = 722
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 64/107 (59%), Gaps = 3/107 (2%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G S+ K C ++L++++ KH W F PVD + L LHDY II+HPMDL TVK ++
Sbjct: 302 GKLSEHLKYCDSILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKM 361
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKW 469
+ Y+ + FA D+RL F N YNP +V MA +L +FE ++
Sbjct: 362 DSREYQDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRF 408
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 51/91 (56%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD L L DY II++PMD+GT+K RL N++ S E +D
Sbjct: 42 VVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLEHNYFWSSSECMQDF 101
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
+ YN D+ +MA+ L KIF K
Sbjct: 102 NTVLQSCYIYNKPTDDIVLMAQALEKIFLQK 132
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 49/75 (65%), Gaps = 4/75 (5%)
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWELDR 610
MTYDEK++LS ++ LP EKL +V II+ R SL + DEIE+D +++ TL EL+R
Sbjct: 568 MTYDEKRQLSLDINRLPGEKLGRVVHIIQSREPSLRDSNPDEIEIDFETLKPTTLRELER 627
Query: 611 FVTNYKKSLSKNKRK 625
+V K L K +RK
Sbjct: 628 YV---KSCLQKKQRK 639
>gi|448531883|ref|XP_003870352.1| Bdf1 transcription factor [Candida orthopsilosis Co 90-125]
gi|380354706|emb|CCG24222.1| Bdf1 transcription factor [Candida orthopsilosis]
Length = 730
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 65/102 (63%), Gaps = 3/102 (2%)
Query: 372 FKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
+ C+ +++LM KH + F APVD L L +Y I++ PMDLGT++++L N Y+
Sbjct: 379 LRFCNQTIKELMSKKHYNYNFPFLAPVDAVALNLPNYHEIVKEPMDLGTIQSKLTNNLYE 438
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWV 470
+ EF +D+RL F N +NP+G DV++M +L IF+ KWV
Sbjct: 439 NADEFEKDIRLMFRNCYAFNPEGTDVNMMGHRLEAIFDKKWV 480
Score = 47.0 bits (110), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 38/80 (47%)
Query: 391 FNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPK 450
F APVD L + Y+ I PMDL T++ ++N N Y+ + +D L N +N +
Sbjct: 225 FLAPVDTVKLNVPFYYNYIPRPMDLLTIERKINANAYEEISQVVDDFNLMVDNCKKFNGE 284
Query: 451 GQDVHIMAEQLLKIFEDKWV 470
+ MA + FE +
Sbjct: 285 AAGISKMATNIQAHFEKHML 304
>gi|432882591|ref|XP_004074106.1| PREDICTED: bromodomain-containing protein 3-like [Oryzias latipes]
Length = 823
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 63/107 (58%), Gaps = 3/107 (2%)
Query: 372 FKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
+ CS +L++L+ KH W F PVD +LGLHDY II+ PMDL T+K +++ Y+
Sbjct: 392 LRYCSGVLKELLSKKHAAYAWPFYKPVDAVSLGLHDYHEIIKFPMDLSTIKRKMDGREYR 451
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
++F+ DVRL F N YNP DV MA +L +FE + + E
Sbjct: 452 EAQQFSADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFCFAKMPDE 498
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 53/99 (53%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
+L+ L +H W F+ PVD L L DY II+ PMD+GT++ RL N+Y+S E +D
Sbjct: 84 VVLKSLWRHHFAWPFHEPVDAAKLNLPDYHKIIKTPMDMGTIRKRLENNYYRSASECMQD 143
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
F N YN D+ +MA+ L K F K + E
Sbjct: 144 FNAMFTNCYIYNKPTDDIVLMAQSLEKAFLQKVAQMPQE 182
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 50/81 (61%), Gaps = 4/81 (4%)
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQ-HDDEIEVDIDSVDAETLWELDR 610
M+YDEK++LS ++ LP EKL +V II+ R SL + +EIE+D +++ TL EL+R
Sbjct: 665 MSYDEKRQLSLDINKLPGEKLGRVVYIIQSREPSLRDTNPEEIEIDFETLKPSTLRELER 724
Query: 611 FVTNYKKSLSKNKRKAELANQ 631
+V L K RK ++ +
Sbjct: 725 YVMT---CLRKKPRKPYVSTK 742
>gi|159491100|ref|XP_001703511.1| Ring3 protein [Chlamydomonas reinhardtii]
gi|158280435|gb|EDP06193.1| Ring3 protein [Chlamydomonas reinhardtii]
Length = 429
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 102/213 (47%), Gaps = 19/213 (8%)
Query: 373 KSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKE 432
K CS L+ +M+HK + FN PVD DY ++ PMD TV+ R +Y+ PK+
Sbjct: 91 KHCSQALKAIMQHKWAFPFNTPVDTSRF--VDYLKVVATPMDFSTVRNRTEAGYYRDPKD 148
Query: 433 FAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKW-VVIESEYNREMRIGADYEMGFH 491
+ DV L F NA YN G D H+MA+ L ++ E+K+ +I E + E+ H
Sbjct: 149 WWSDVMLVFSNAKRYNAPGSDCHLMAQTLQEVSEEKYEKLIAPRLAEEAAVTQREEL--H 206
Query: 492 TPTSRKAPPLPPPLDMRRILDRSESITHPMDSRLKPISTTPSSRTPAPKKPKAKDPHKRD 551
L RR + + MD++ + + A ++ K+ +
Sbjct: 207 -------------LRKRRAELANGQVADAMDAQCGMLFGLMAELHAAIREAKSMAASLCE 253
Query: 552 -MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRN 583
+T +EKQ L+ +Q LP+ +L++IV + R+
Sbjct: 254 PLTLEEKQALAATIQGLPTAQLESIVAFVASRH 286
>gi|327288352|ref|XP_003228892.1| PREDICTED: bromodomain-containing protein 3-like [Anolis
carolinensis]
Length = 734
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 64/107 (59%), Gaps = 3/107 (2%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G S+ K C ++L++++ KH W F PVD + L LHDY II+HPMDL TVK ++
Sbjct: 310 GKLSEHLKYCDSILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKM 369
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKW 469
+ Y+ + FA D+RL F N YNP +V MA +L +FE ++
Sbjct: 370 DSREYQDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRF 416
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 52/91 (57%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD L L DY II++PMD+GT+K RL N+Y S E +D
Sbjct: 42 VVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLEHNYYWSASECMQDF 101
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN D+ +MA+ L KIF K
Sbjct: 102 NTMFTNCYIYNKPTDDIVLMAQALEKIFLQK 132
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 49/75 (65%), Gaps = 4/75 (5%)
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWELDR 610
MTYDEK++LS ++ LP EKL +V II+ R SL + DEIE+D +++ TL EL+R
Sbjct: 580 MTYDEKRQLSLDINRLPGEKLGRVVHIIQSREPSLRDSNPDEIEIDFETLKPTTLRELER 639
Query: 611 FVTNYKKSLSKNKRK 625
+V K L K +RK
Sbjct: 640 YV---KSCLQKKQRK 651
>gi|326930474|ref|XP_003211372.1| PREDICTED: bromodomain-containing protein 3-like [Meleagris
gallopavo]
Length = 720
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 64/107 (59%), Gaps = 3/107 (2%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G S+ K C ++L++++ KH W F PVD + L LHDY II+HPMDL TVK ++
Sbjct: 302 GKLSEHLKYCDSILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKM 361
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKW 469
+ Y+ + FA D+RL F N YNP +V MA +L +FE ++
Sbjct: 362 DSREYQDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRF 408
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 52/91 (57%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD L L DY II++PMD+GT+K RL N+Y S E +D
Sbjct: 42 VVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLEHNYYWSASECMQDF 101
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN D+ +MA+ L KIF K
Sbjct: 102 NTMFTNCYIYNKPTDDIVLMAQALEKIFLQK 132
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 49/75 (65%), Gaps = 4/75 (5%)
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWELDR 610
MTYDEK++LS ++ LP EKL +V II+ R SL + DEIE+D +++ TL EL+R
Sbjct: 568 MTYDEKRQLSLDINRLPGEKLGRVVHIIQSREPSLRDSNPDEIEIDFETLKPTTLRELER 627
Query: 611 FVTNYKKSLSKNKRK 625
+V K L K +RK
Sbjct: 628 YV---KSCLQKKQRK 639
>gi|449269062|gb|EMC79871.1| Bromodomain-containing protein 3 [Columba livia]
Length = 724
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 64/107 (59%), Gaps = 3/107 (2%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G S+ K C ++L++++ KH W F PVD + L LHDY II+HPMDL TVK ++
Sbjct: 304 GKLSEHLKYCDSILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKM 363
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKW 469
+ Y+ + FA D+RL F N YNP +V MA +L +FE ++
Sbjct: 364 DSREYQDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRF 410
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 53/93 (56%), Gaps = 2/93 (2%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD L L DY II++PMD+GT+K RL N+Y S E +D
Sbjct: 42 VVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLEHNYYWSASECMQDF 101
Query: 438 RLTFHNA--MTYNPKGQDVHIMAEQLLKIFEDK 468
F N +++ D+ +MA+ L KIF K
Sbjct: 102 NTMFTNCLYLSFLQPTDDIVLMAQALEKIFLQK 134
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 49/75 (65%), Gaps = 4/75 (5%)
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWELDR 610
MTYDEK++LS ++ LP EKL +V II+ R SL + DEIE+D +++ TL EL+R
Sbjct: 570 MTYDEKRQLSLDINRLPGEKLGRVVHIIQSREPSLRDSNPDEIEIDFETLKPTTLRELER 629
Query: 611 FVTNYKKSLSKNKRK 625
+V K L K +RK
Sbjct: 630 YV---KSCLQKKQRK 641
>gi|384499194|gb|EIE89685.1| hypothetical protein RO3G_14396 [Rhizopus delemar RA 99-880]
Length = 446
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 62/101 (61%), Gaps = 3/101 (2%)
Query: 372 FKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
K C+ L++L K K+ + F PVDV L + DY II+HPMDL T++ +LN Y
Sbjct: 175 LKFCAQALKELKKSKYRDINYPFLHPVDVVALNIPDYVDIIKHPMDLSTIEKKLNDGEYV 234
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKW 469
PK+F ED++L F+N YNP +H M QL K+F++KW
Sbjct: 235 EPKDFEEDIKLMFNNCYLYNPPSLPIHKMGRQLEKVFDEKW 275
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 49/95 (51%)
Query: 372 FKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPK 431
K C A++ L KH+ F PVD L + DY II HPMDL TV +LN Y S
Sbjct: 6 IKYCGAIMRNLKKHRDATPFLQPVDYIQLNIPDYPKIIHHPMDLATVDKKLNSGQYSSVD 65
Query: 432 EFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFE 466
++ DVRL F+N +N + ++ + + FE
Sbjct: 66 QWICDVRLVFNNCFKFNGPEATISMLCQNVESAFE 100
>gi|118099425|ref|XP_425330.2| PREDICTED: bromodomain-containing protein 3 [Gallus gallus]
Length = 722
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 64/107 (59%), Gaps = 3/107 (2%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G S+ K C ++L++++ KH W F PVD + L LHDY II+HPMDL TVK ++
Sbjct: 302 GKLSEHLKYCDSILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKM 361
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKW 469
+ Y+ + FA D+RL F N YNP +V MA +L +FE ++
Sbjct: 362 DSREYQDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRF 408
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 52/91 (57%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD L L DY II++PMD+GT+K RL N+Y S E +D
Sbjct: 42 VVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLEHNYYWSASECMQDF 101
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN D+ +MA+ L KIF K
Sbjct: 102 NTMFTNCYIYNKPTDDIVLMAQALEKIFLQK 132
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 49/75 (65%), Gaps = 4/75 (5%)
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWELDR 610
MTYDEK++LS ++ LP EKL +V II+ R SL + DEIE+D +++ TL EL+R
Sbjct: 568 MTYDEKRQLSLDINRLPGEKLGRVVHIIQSREPSLRDSNPDEIEIDFETLKPTTLRELER 627
Query: 611 FVTNYKKSLSKNKRK 625
+V K L K +RK
Sbjct: 628 YV---KSCLQKKQRK 639
>gi|62122590|dbj|BAD93258.1| RING3 [Oryzias latipes]
Length = 814
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 63/107 (58%), Gaps = 3/107 (2%)
Query: 372 FKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
+ CS +L++L+ KH W F PVD +LGLHDY II+ PMDL T+K +++ Y+
Sbjct: 383 LRYCSGVLKELLSKKHAAYAWPFYKPVDAVSLGLHDYHEIIKFPMDLSTIKRKMDGREYR 442
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
++F+ DVRL F N YNP DV MA +L +FE + + E
Sbjct: 443 EAQQFSADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFCFAKMPDE 489
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 85/190 (44%), Gaps = 30/190 (15%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
+L+ L +H W F+ PVD L L DY II+ PMD+GT+K RL N+Y+S E +D
Sbjct: 84 VVLKSLWRHHFAWPFHEPVDAAKLNLPDYHKIIKTPMDMGTIKKRLENNYYRSASECMQD 143
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE---------YNREMRIGADYE 487
F N YN D+ +MA+ L K F K + E +++ +I
Sbjct: 144 FNAMFTNCYIYNKPTDDIVLMAQSLEKAFLQKVAQMPQEEIELPPPVPRSKQSKISGGVT 203
Query: 488 MGFHTPT---SRKAPPLP---------PPLDMRRILDRSESITHPMDSRLKPISTTPSSR 535
P S +PP P PP + IL + SIT L+P T P+
Sbjct: 204 TAHQVPAVSQSVYSPPTPETPDSILSTPP---QTILTKCSSIT------LQPEQTIPAIT 254
Query: 536 TPAPKKPKAK 545
P P +P AK
Sbjct: 255 GPPPTQPTAK 264
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 50/81 (61%), Gaps = 4/81 (4%)
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQ-HDDEIEVDIDSVDAETLWELDR 610
M+YDEK++LS ++ LP EKL +V II+ R SL + +EIE+D +++ TL EL+R
Sbjct: 656 MSYDEKRQLSLDINKLPGEKLGRVVYIIQSREPSLRDTNPEEIEIDFETLKPSTLRELER 715
Query: 611 FVTNYKKSLSKNKRKAELANQ 631
+V L K RK ++ +
Sbjct: 716 YVMT---CLRKKPRKPYVSTK 733
>gi|18157527|dbj|BAB83842.1| RING3 [Oryzias latipes]
Length = 814
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 63/107 (58%), Gaps = 3/107 (2%)
Query: 372 FKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
+ CS +L++L+ KH W F PVD +LGLHDY II+ PMDL T+K +++ Y+
Sbjct: 383 LRYCSGVLKELLSKKHAAYAWPFYKPVDAVSLGLHDYHEIIKFPMDLSTIKRKMDGREYR 442
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
++F+ DVRL F N YNP DV MA +L +FE + + E
Sbjct: 443 EAQQFSADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFCFAKMPDE 489
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 85/190 (44%), Gaps = 30/190 (15%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
+L+ L +H W F+ PVD L L DY II+ PMD+GT++ RL N+Y+S E +D
Sbjct: 84 VVLKSLWRHHFAWPFHEPVDAAKLNLPDYHKIIKTPMDMGTIRKRLENNYYRSASECMQD 143
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE---------YNREMRIGADYE 487
F N YN D+ +MA+ L K F K + E +++ +I
Sbjct: 144 FNAMFTNCYIYNKPTDDIVLMAQSLEKAFLQKVAQMPQEEIELPPPVPRSKQSKISGGVT 203
Query: 488 MGFHTPT---SRKAPPLP---------PPLDMRRILDRSESITHPMDSRLKPISTTPSSR 535
P S +PP P PP + IL + SIT L+P T P+
Sbjct: 204 TAHQVPAVSQSVYSPPTPETPDSILSTPP---QTILTKCSSIT------LQPEQTIPAIT 254
Query: 536 TPAPKKPKAK 545
P P +P AK
Sbjct: 255 GPPPTQPTAK 264
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 50/81 (61%), Gaps = 4/81 (4%)
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQ-HDDEIEVDIDSVDAETLWELDR 610
M+YDEK++LS ++ LP EKL +V II+ R SL + +EIE+D +++ TL EL+R
Sbjct: 656 MSYDEKRQLSLDINKLPGEKLGRVVYIIQSREPSLRDTNPEEIEIDFETLKPSTLRELER 715
Query: 611 FVTNYKKSLSKNKRKAELANQ 631
+V L K RK ++ +
Sbjct: 716 YVMT---CLRKKPRKPYVSTK 733
>gi|119624070|gb|EAX03665.1| bromodomain containing 2, isoform CRA_c [Homo sapiens]
Length = 552
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 57/95 (60%), Gaps = 3/95 (3%)
Query: 370 KIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNW 426
K K C+ +L++L+ KH W F PVD LGLHDY II+HPMDL TVK ++
Sbjct: 242 KQLKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRD 301
Query: 427 YKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQL 461
Y+ +EFA DVRL F N YNP DV MA +L
Sbjct: 302 YRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKL 336
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 52/91 (57%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD LGL DY II+ PMD+GT+K RL N+Y + E +D
Sbjct: 86 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDF 145
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN D+ +MA+ L KIF K
Sbjct: 146 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 176
>gi|417404059|gb|JAA48805.1| Putative transcription initiation factor tfiid subunit bdf1
[Desmodus rotundus]
Length = 707
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 63/108 (58%), Gaps = 3/108 (2%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G S+ + C ++L++L+ KH W F PVD + L LHDY II+HPMDL TVK ++
Sbjct: 288 GKLSEHLRHCDSILKELLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKM 347
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWV 470
+ Y + FA D+RL F N YNP +V MA +L +FE ++
Sbjct: 348 DSREYPDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFA 395
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 42/73 (57%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD L L DY II++PMD+GT+K RL ++Y S E +D
Sbjct: 46 VVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENSYYWSASECMQDF 105
Query: 438 RLTFHNAMTYNPK 450
F N YN K
Sbjct: 106 NTMFTNCYIYNKK 118
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 61/105 (58%), Gaps = 11/105 (10%)
Query: 529 STTPSSRTPAPKKPKAKDPHKRD-------MTYDEKQKLSTNLQSLPSEKLDNIVQIIKK 581
STT +SR P +A P+ + M+YDEK++LS ++ LP EKL +V II+
Sbjct: 524 STTAASRQPKKGGKQAVAPYDSEEEEEGLPMSYDEKRQLSLDINRLPGEKLGRVVHIIQS 583
Query: 582 RNSSLFQHD-DEIEVDIDSVDAETLWELDRFVTNYKKSLSKNKRK 625
R SL + DEIE+D +++ TL EL+R+V K L K +RK
Sbjct: 584 REPSLRDSNPDEIEIDFETLKPTTLRELERYV---KSCLQKKQRK 625
>gi|440904692|gb|ELR55166.1| Bromodomain-containing protein 3, partial [Bos grunniens mutus]
Length = 613
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 63/108 (58%), Gaps = 3/108 (2%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G S+ + C ++L++++ KH W F PVD + L LHDY II+HPMDL TVK ++
Sbjct: 235 GRLSEHLRHCDSILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKM 294
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWV 470
+ Y + FA D+RL F N YNP +V MA +L +FE ++
Sbjct: 295 DSREYPDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFA 342
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 40/72 (55%)
Query: 404 DYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLK 463
DY II++PMD+GT+K RL N+Y S E +D F N YN D+ +MA+ L K
Sbjct: 1 DYHKIIKNPMDMGTIKKRLENNYYWSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEK 60
Query: 464 IFEDKWVVIESE 475
IF K + E
Sbjct: 61 IFLQKVAQMPQE 72
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 49/75 (65%), Gaps = 4/75 (5%)
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWELDR 610
M+YDEK++LS ++ LP EKL +V II+ R SL + DEIE+D +++ TL EL+R
Sbjct: 497 MSYDEKRQLSLDINRLPGEKLGRVVHIIQSREPSLRDSNPDEIEIDFETLKPTTLRELER 556
Query: 611 FVTNYKKSLSKNKRK 625
+V K L K +RK
Sbjct: 557 YV---KSCLQKKQRK 568
>gi|417404197|gb|JAA48868.1| Putative transcription initiation factor tfiid subunit bdf1
[Desmodus rotundus]
Length = 725
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 63/108 (58%), Gaps = 3/108 (2%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G S+ + C ++L++L+ KH W F PVD + L LHDY II+HPMDL TVK ++
Sbjct: 306 GKLSEHLRHCDSILKELLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKM 365
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWV 470
+ Y + FA D+RL F N YNP +V MA +L +FE ++
Sbjct: 366 DSREYPDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFA 413
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 54/98 (55%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD L L DY II++PMD+GT+K RL ++Y S E +D
Sbjct: 46 VVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENSYYWSASECMQDF 105
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
F N YN D+ +MA+ L KIF K + E
Sbjct: 106 NTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQE 143
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 61/105 (58%), Gaps = 11/105 (10%)
Query: 529 STTPSSRTPAPKKPKAKDPHKRD-------MTYDEKQKLSTNLQSLPSEKLDNIVQIIKK 581
STT +SR P +A P+ + M+YDEK++LS ++ LP EKL +V II+
Sbjct: 542 STTAASRQPKKGGKQAVAPYDSEEEEEGLPMSYDEKRQLSLDINRLPGEKLGRVVHIIQS 601
Query: 582 RNSSLFQHD-DEIEVDIDSVDAETLWELDRFVTNYKKSLSKNKRK 625
R SL + DEIE+D +++ TL EL+R+V K L K +RK
Sbjct: 602 REPSLRDSNPDEIEIDFETLKPTTLRELERYV---KSCLQKKQRK 643
>gi|224473804|gb|ACN49148.1| bromodomain containing 2 [Oryzias dancena]
Length = 610
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 60/98 (61%), Gaps = 3/98 (3%)
Query: 372 FKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
+ CS +L++L+ KH W F PVD +LGLHDY II+ PMDL T+K +++ Y+
Sbjct: 392 LRYCSGVLKELLSKKHAAYAWPFYKPVDAVSLGLHDYHEIIKQPMDLSTIKRKMDSREYR 451
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFE 466
++F+ DVRL F N YNP DV MA +L +FE
Sbjct: 452 DAQQFSADVRLMFSNCYKYNPPDHDVVAMARKLQDVFE 489
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 53/99 (53%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
+L+ L +H W F+ PVD L L DY II+ PMD+GT+K RL N+Y+S E +D
Sbjct: 84 VVLKSLWRHHFAWPFHEPVDAVKLSLPDYHKIIKTPMDMGTIKKRLENNYYRSASECMQD 143
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
F N YN D+ +MA+ L K F K + E
Sbjct: 144 FNAMFTNCYIYNKPTDDIVLMAQSLEKAFLQKVAQMPQE 182
>gi|354544706|emb|CCE41432.1| hypothetical protein CPAR2_304210 [Candida parapsilosis]
Length = 748
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 65/102 (63%), Gaps = 3/102 (2%)
Query: 372 FKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
+ C+ +++LM KH + F APVD L L +Y I++ PMDLGT++++L N Y+
Sbjct: 389 LRFCNQTIKELMSKKHYNYNFPFLAPVDAVALNLPNYHDIVKEPMDLGTIQSKLTNNLYE 448
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWV 470
+ +F +DVRL F N +NP+G DV++M +L IF+ KWV
Sbjct: 449 NADDFEKDVRLVFRNCYAFNPEGTDVNMMGHRLEAIFDKKWV 490
Score = 48.5 bits (114), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 38/80 (47%)
Query: 391 FNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPK 450
F APVD L + Y+ I PMDL T++ ++N N Y+ + +D L N +N +
Sbjct: 232 FLAPVDTVKLNVPFYYNYIPRPMDLSTIERKINANAYEDIAQVVDDFNLMVENCKKFNGE 291
Query: 451 GQDVHIMAEQLLKIFEDKWV 470
+ MA + FE +
Sbjct: 292 AAGISKMATNIQAHFEKHML 311
>gi|194225997|ref|XP_001917930.1| PREDICTED: LOW QUALITY PROTEIN: bromodomain-containing protein 3
[Equus caballus]
Length = 728
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 65/113 (57%), Gaps = 3/113 (2%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G S+ + C ++L++++ KH W F PVD + L LHDY II+HPMDL TVK ++
Sbjct: 306 GKLSEHLRHCDSILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKM 365
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
+ Y + FA D+RL F N YNP +V MA +L +FE ++ + E
Sbjct: 366 DSREYPDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE 418
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 54/98 (55%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD L L DY II++PMD+GT+K RL N+Y S E +D
Sbjct: 46 VVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDF 105
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
F N YN D+ +MA+ L KIF K + E
Sbjct: 106 NTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQE 143
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 49/75 (65%), Gaps = 4/75 (5%)
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWELDR 610
M+YDEK++LS ++ LP EKL +V II+ R SL + DEIE+D +++ TL EL+R
Sbjct: 574 MSYDEKRQLSLDINRLPGEKLGRVVHIIQSREPSLRDSNPDEIEIDFETLKPTTLRELER 633
Query: 611 FVTNYKKSLSKNKRK 625
+V K L K +RK
Sbjct: 634 YV---KSCLQKKQRK 645
>gi|431898968|gb|ELK07338.1| Bromodomain-containing protein 3 [Pteropus alecto]
Length = 756
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 65/113 (57%), Gaps = 3/113 (2%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G S+ + C ++L++++ KH W F PVD + L LHDY II+HPMDL TVK ++
Sbjct: 336 GKLSEHLRHCESILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKM 395
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
+ Y + FA D+RL F N YNP +V MA +L +FE ++ + E
Sbjct: 396 DSREYPDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE 448
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 52/121 (42%), Gaps = 30/121 (24%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGL------------------------------HDYFT 407
+++ L KH+ W F PVD L L DY
Sbjct: 46 VVKTLWKHQFAWPFYQPVDAIKLNLPVSARPTPLLQLPGGAAPTLAEVLPEMWLVRDYHK 105
Query: 408 IIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFED 467
II++PMD+GT+K RL ++Y S E +D F N YN D+ +MA+ L KIF
Sbjct: 106 IIKNPMDMGTIKKRLENSYYWSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQ 165
Query: 468 K 468
K
Sbjct: 166 K 166
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 49/75 (65%), Gaps = 4/75 (5%)
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWELDR 610
M+YDEK++LS ++ LP EKL +V II+ R SL + DEIE+D +++ TL EL+R
Sbjct: 602 MSYDEKRQLSLDINRLPGEKLGRVVHIIQSREPSLRDSNPDEIEIDFETLKPTTLRELER 661
Query: 611 FVTNYKKSLSKNKRK 625
+V K L K +RK
Sbjct: 662 YV---KSCLQKKQRK 673
>gi|348541135|ref|XP_003458042.1| PREDICTED: bromodomain-containing protein 2-like [Oreochromis
niloticus]
Length = 821
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 59/98 (60%), Gaps = 3/98 (3%)
Query: 372 FKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
+ CS +L++L+ KH W F PVD +LGLHDY II+ PMDL T+K +++ Y+
Sbjct: 390 MRYCSGVLKELLSKKHAAYAWPFYKPVDASSLGLHDYHDIIKQPMDLSTIKRKMDGREYR 449
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFE 466
+F+ DVRL F N YNP DV MA +L +FE
Sbjct: 450 EAHQFSADVRLMFSNCYKYNPPDHDVVAMARKLQDVFE 487
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 51/92 (55%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
LL+ L +H W F+ PVD L L DY II+ PMD+GT+K RL N+Y+S E +D
Sbjct: 86 VLLKSLWRHHFAWPFHEPVDAVKLNLPDYHKIIKTPMDMGTIKKRLENNYYRSASECMQD 145
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN D+ +MA+ L K F K
Sbjct: 146 FNTMFTNCYIYNKPTDDIVLMAQSLEKAFLQK 177
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 47/75 (62%), Gaps = 4/75 (5%)
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQ-HDDEIEVDIDSVDAETLWELDR 610
M+YDEK++LS ++ LP EKL +V II+ R SL + +EIE+D +++ TL EL+R
Sbjct: 664 MSYDEKRQLSLDINKLPGEKLGRVVYIIQSREPSLRDTNPEEIEIDFETLKPSTLRELER 723
Query: 611 FVTNYKKSLSKNKRK 625
+V L K RK
Sbjct: 724 YVMT---CLRKKPRK 735
>gi|73967596|ref|XP_858014.1| PREDICTED: bromodomain-containing protein 3 isoform 3 [Canis lupus
familiaris]
Length = 728
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 65/113 (57%), Gaps = 3/113 (2%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G S+ + C ++L++++ KH W F PVD + L LHDY II+HPMDL TVK ++
Sbjct: 306 GKLSEHLRHCDSILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKM 365
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
+ Y + FA D+RL F N YNP +V MA +L +FE ++ + E
Sbjct: 366 DSREYPDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE 418
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 52/91 (57%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD L L DY II++PMD+GT+K RL N+Y S E +D
Sbjct: 46 VVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDF 105
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN D+ +MA+ L KIF K
Sbjct: 106 NTMFTNCYIYNKPTDDIVLMAQALEKIFLQK 136
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 49/75 (65%), Gaps = 4/75 (5%)
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWELDR 610
M+YDEK++LS ++ LP EKL +V II+ R SL + DEIE+D +++ TL EL+R
Sbjct: 574 MSYDEKRQLSLDINRLPGEKLGRVVHIIQSREPSLRDSNPDEIEIDFETLKPTTLRELER 633
Query: 611 FVTNYKKSLSKNKRK 625
+V K L K +RK
Sbjct: 634 YV---KSCLQKKQRK 645
>gi|63100514|gb|AAH95027.1| Brd3a protein [Danio rerio]
Length = 513
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 65/113 (57%), Gaps = 3/113 (2%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G S+ K C +L++++ KH W F PVD + L LHDY II+HPMDL TVK ++
Sbjct: 290 GRRSEQLKYCDVILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKM 349
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
+ Y+ + FA DVRL F N YNP +V MA +L +FE ++ + E
Sbjct: 350 DSREYQDAQTFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE 402
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 55/98 (56%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
++E L KH+ W F PVD LGL DY II++PMD+GT+K RL +Y S E +D
Sbjct: 42 VVETLWKHQFAWPFYQPVDAVKLGLPDYHKIIKNPMDMGTIKKRLESVYYYSASECMQDF 101
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
F N YN D+ +MA+ L KIF K ++ E
Sbjct: 102 NTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVALMPQE 139
>gi|324500843|gb|ADY40384.1| Bromodomain-containing protein 2 [Ascaris suum]
Length = 1194
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 63/115 (54%), Gaps = 4/115 (3%)
Query: 359 NELAHGF-GTGSKIFKSCSALLEKLMKHK---HGWVFNAPVDVKNLGLHDYFTIIRHPMD 414
N+L F G ++ K C ++ +L K W F PVDV+ L LHDY+ I++ PMD
Sbjct: 361 NQLKPRFKGKWTEQMKYCQRIISELFSKKCKSFTWPFLEPVDVEGLKLHDYYDIVKQPMD 420
Query: 415 LGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKW 469
LGT++ ++ Y SP+E ED+ L N YNP VH + L K FE+KW
Sbjct: 421 LGTIRRKMEAKQYASPEEMREDLLLVCENCFKYNPPSDPVHQHGKTLQKYFEEKW 475
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 54/98 (55%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+L+ M+HKH W F PVD L L DY +I+ PMD+ T++ RL +Y S K+ +D
Sbjct: 126 VLKPAMRHKHAWPFTKPVDAVRLSLPDYHKVIKRPMDMNTIEKRLRNVYYYSAKDCMQDF 185
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
F N +N DV +M + + ++ +K ++ S+
Sbjct: 186 EAIFANCYKFNQNEDDVSLMCKNIENLYREKIKLLPSQ 223
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 61/119 (51%), Gaps = 20/119 (16%)
Query: 523 SRLKPISTTPSSRTPAPKKPKAKDPHKR----------------DMTYDEKQKLSTNLQS 566
S+ KP T P+ +T P + + P +R M+YDEK++LS ++
Sbjct: 745 SKNKPK-TEPAQQTAPPPVVQHQPPPRRVREDYDFDSEDERSAEPMSYDEKRQLSLDINK 803
Query: 567 LPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWELDRFVTNYKKSLSKNKRK 625
LP +KL ++V II+ R + + +EIE+D +++ TL EL+ FV L K RK
Sbjct: 804 LPGDKLSSVVSIIESREALRDFNPEEIEIDFETLKPTTLRELEAFVA---ACLKKKPRK 859
>gi|395844316|ref|XP_003794908.1| PREDICTED: bromodomain-containing protein 3 isoform 1 [Otolemur
garnettii]
Length = 726
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 79/154 (51%), Gaps = 19/154 (12%)
Query: 341 PPAESNKKSKLNGKKQAG-------------NELAHGFGTGSKI---FKSCSALLEKLMK 384
PP K++K+ ++++G +E+ G K+ + C ++L +++
Sbjct: 265 PPLSDPKQAKVVARRESGGRPIKPPKKDLEDSEVPQHAGKKGKLSEHLRYCDSILREMLS 324
Query: 385 HKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTF 441
KH W F PVD + L LHDY II+HPMDL TVK +++ Y + FA D+RL F
Sbjct: 325 KKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDSREYPDAQGFAADIRLMF 384
Query: 442 HNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
N YNP +V MA +L +FE ++ + E
Sbjct: 385 SNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE 418
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 52/91 (57%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD L L DY II++PMD+GT+K RL N+Y S E +D
Sbjct: 46 VVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDF 105
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN D+ +MA+ L KIF K
Sbjct: 106 NTMFTNCYIYNKPTDDIVLMAQALEKIFLQK 136
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 74/138 (53%), Gaps = 12/138 (8%)
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWELDR 610
M+YDEK++LS ++ LP EKL +V II+ R SL + DEIE+D +++ TL EL+R
Sbjct: 572 MSYDEKRQLSLDINRLPGEKLGRVVHIIQSREPSLRDSNPDEIEIDFETLKPTTLRELER 631
Query: 611 FVTNYKKSLSKNKRKAELANQARAVAQQNVQQQTPAPVVTEVRKEI--RTDDRIGSTSSP 668
+V K L K +RK A+ + A+ + + E +KE+ R D G SS
Sbjct: 632 YV---KSCLQKKQRKPFSASGKKQAAKSKEE------LAQEKKKELEKRLQDVSGQLSSS 682
Query: 669 VQVEKQVDNGSRSSSSSS 686
+ ++ GS +S S
Sbjct: 683 KKPARKEKPGSAASGGPS 700
>gi|33416865|gb|AAH55543.1| Brd3a protein [Danio rerio]
Length = 515
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/118 (40%), Positives = 67/118 (56%), Gaps = 5/118 (4%)
Query: 363 HGFGTG--SKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGT 417
HG G S+ K C +L++++ KH W F PVD + L LHDY II+HPMDL T
Sbjct: 284 HGGKKGRLSEQLKYCDVILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLST 343
Query: 418 VKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
VK +++ Y+ + FA DVRL F N YNP +V MA +L +FE ++ + E
Sbjct: 344 VKKKMDSREYQDAQTFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE 401
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 55/98 (56%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD LGL DY II++PMD+GT+K RL +Y S E +D
Sbjct: 42 VVKTLWKHQFAWPFYQPVDAVKLGLPDYHKIIKNPMDMGTIKKRLESVYYYSASECMQDF 101
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
F N YN D+ +MA+ L KIF K ++ E
Sbjct: 102 NTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVALMPQE 139
>gi|301770655|ref|XP_002920742.1| PREDICTED: bromodomain-containing protein 3-like [Ailuropoda
melanoleuca]
Length = 728
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 65/113 (57%), Gaps = 3/113 (2%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G S+ + C ++L++++ KH W F PVD + L LHDY II+HPMDL TVK ++
Sbjct: 306 GKLSEHLRHCDSILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKM 365
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
+ Y + FA DVRL F N YNP +V MA +L +FE ++ + E
Sbjct: 366 DGREYADAQGFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE 418
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 52/91 (57%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD L L DY II++PMD+GT+K RL N+Y S E +D
Sbjct: 46 VVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDF 105
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN D+ +MA+ L KIF K
Sbjct: 106 NTMFTNCYIYNKPTDDIVLMAQALEKIFLQK 136
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 49/75 (65%), Gaps = 4/75 (5%)
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWELDR 610
M+YDEK++LS ++ LP EKL +V II+ R SL + DEIE+D +++ TL EL+R
Sbjct: 574 MSYDEKRQLSLDINRLPGEKLGRVVHIIQSREPSLRDSNPDEIEIDFETLKPTTLRELER 633
Query: 611 FVTNYKKSLSKNKRK 625
+V K L K +RK
Sbjct: 634 YV---KSCLQKKQRK 645
>gi|167515986|ref|XP_001742334.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778958|gb|EDQ92572.1| predicted protein [Monosiga brevicollis MX1]
Length = 497
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 62/101 (61%), Gaps = 3/101 (2%)
Query: 372 FKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
+ C +++ L KH W F PVD+ L + DY+ +I+ PMDLGTV+T+L + Y+
Sbjct: 247 MRVCYDIIKDLFGKKHQAYAWPFYEPVDIVKLNIPDYYDVIKQPMDLGTVRTKLEEGEYE 306
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKW 469
+ +FA DVRL F N TYNP G DV MA+ ++FE +W
Sbjct: 307 TRDDFAHDVRLVFANCYTYNPPGSDVVKMAKSTSEVFELQW 347
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 51/85 (60%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
+L L KH W F PVD K LGL Y II +PMDLGT++ +L K Y S +E +D
Sbjct: 92 VILPTLNKHPSAWPFKKPVDWKKLGLLSYPEIIANPMDLGTIRNKLRKKEYFSGRECLDD 151
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQL 461
+ L +HN T+N DV+IM++ L
Sbjct: 152 IELVWHNCQTFNRPSDDVYIMSQAL 176
>gi|395844318|ref|XP_003794909.1| PREDICTED: bromodomain-containing protein 3 isoform 2 [Otolemur
garnettii]
Length = 743
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 79/154 (51%), Gaps = 19/154 (12%)
Query: 341 PPAESNKKSKLNGKKQAG-------------NELAHGFGTGSKI---FKSCSALLEKLMK 384
PP K++K+ ++++G +E+ G K+ + C ++L +++
Sbjct: 265 PPLSDPKQAKVVARRESGGRPIKPPKKDLEDSEVPQHAGKKGKLSEHLRYCDSILREMLS 324
Query: 385 HKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTF 441
KH W F PVD + L LHDY II+HPMDL TVK +++ Y + FA D+RL F
Sbjct: 325 KKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDSREYPDAQGFAADIRLMF 384
Query: 442 HNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
N YNP +V MA +L +FE ++ + E
Sbjct: 385 SNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE 418
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 52/91 (57%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD L L DY II++PMD+GT+K RL N+Y S E +D
Sbjct: 46 VVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDF 105
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN D+ +MA+ L KIF K
Sbjct: 106 NTMFTNCYIYNKPTDDIVLMAQALEKIFLQK 136
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 74/138 (53%), Gaps = 12/138 (8%)
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWELDR 610
M+YDEK++LS ++ LP EKL +V II+ R SL + DEIE+D +++ TL EL+R
Sbjct: 589 MSYDEKRQLSLDINRLPGEKLGRVVHIIQSREPSLRDSNPDEIEIDFETLKPTTLRELER 648
Query: 611 FVTNYKKSLSKNKRKAELANQARAVAQQNVQQQTPAPVVTEVRKEI--RTDDRIGSTSSP 668
+V K L K +RK A+ + A+ + + E +KE+ R D G SS
Sbjct: 649 YV---KSCLQKKQRKPFSASGKKQAAKSKEE------LAQEKKKELEKRLQDVSGQLSSS 699
Query: 669 VQVEKQVDNGSRSSSSSS 686
+ ++ GS +S S
Sbjct: 700 KKPARKEKPGSAASGGPS 717
>gi|302564433|ref|NP_001181047.1| bromodomain-containing protein 3 [Macaca mulatta]
gi|355567354|gb|EHH23695.1| hypothetical protein EGK_07225 [Macaca mulatta]
gi|383421773|gb|AFH34100.1| bromodomain-containing protein 3 [Macaca mulatta]
gi|384949538|gb|AFI38374.1| bromodomain-containing protein 3 [Macaca mulatta]
gi|387542198|gb|AFJ71726.1| bromodomain-containing protein 3 [Macaca mulatta]
Length = 726
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 78/154 (50%), Gaps = 19/154 (12%)
Query: 341 PPAESNKKSKLNGKKQAGN-------------ELAHGFGTGSKI---FKSCSALLEKLMK 384
PP K++K+ ++++G E+ G K+ + C ++L +++
Sbjct: 265 PPLSDPKQAKVVARRESGGRPIKPPKKDLEDGEVPQHAGKKGKLSEHLRYCDSILREMLS 324
Query: 385 HKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTF 441
KH W F PVD + L LHDY II+HPMDL TVK +++ Y + FA DVRL F
Sbjct: 325 KKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDGREYPDAQGFAADVRLMF 384
Query: 442 HNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
N YNP +V MA +L +FE ++ + E
Sbjct: 385 SNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE 418
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 52/91 (57%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD L L DY II++PMD+GT+K RL N+Y S E +D
Sbjct: 46 VVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDF 105
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN D+ +MA+ L KIF K
Sbjct: 106 NTMFTNCYIYNKPTDDIVLMAQALEKIFLQK 136
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 73/138 (52%), Gaps = 12/138 (8%)
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWELDR 610
M+YDEK++LS ++ LP EKL +V II+ R SL + DEIE+D +++ TL EL+R
Sbjct: 572 MSYDEKRQLSLDINRLPGEKLGRVVHIIQSREPSLRDSNPDEIEIDFETLKPTTLRELER 631
Query: 611 FVTNYKKSLSKNKRKAELANQARAVAQQNVQQQTPAPVVTEVRKEI--RTDDRIGSTSSP 668
+V K L K +RK A+ + A+ + + E +KE+ R D G SS
Sbjct: 632 YV---KSCLQKKQRKPFSASGKKQAAKSKEE------LAQEKKKELEKRLQDVSGQLSSS 682
Query: 669 VQVEKQVDNGSRSSSSSS 686
+ ++ GS S S
Sbjct: 683 KKPARKEKPGSAPSGGPS 700
>gi|426363503|ref|XP_004048879.1| PREDICTED: bromodomain-containing protein 3 [Gorilla gorilla
gorilla]
Length = 726
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 78/154 (50%), Gaps = 19/154 (12%)
Query: 341 PPAESNKKSKLNGKKQAGN-------------ELAHGFGTGSKI---FKSCSALLEKLMK 384
PP K++K+ ++++G E+ G K+ + C ++L +++
Sbjct: 265 PPLSDPKQAKVVARRESGGRPIKPPKKDLEDGEVPQHAGKKGKLSEHLRYCDSILREMLS 324
Query: 385 HKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTF 441
KH W F PVD + L LHDY II+HPMDL TVK +++ Y + FA DVRL F
Sbjct: 325 KKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDGREYPDAQGFAADVRLMF 384
Query: 442 HNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
N YNP +V MA +L +FE ++ + E
Sbjct: 385 SNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE 418
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 52/91 (57%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD L L DY II++PMD+GT+K RL N+Y S E +D
Sbjct: 46 VVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDF 105
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN D+ +MA+ L KIF K
Sbjct: 106 NTMFTNCYIYNKPTDDIVLMAQALEKIFLQK 136
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 73/138 (52%), Gaps = 12/138 (8%)
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWELDR 610
M+YDEK++LS ++ LP EKL +V II+ R SL + DEIE+D +++ TL EL+R
Sbjct: 572 MSYDEKRQLSLDINRLPGEKLGRVVHIIQSREPSLRDSNPDEIEIDFETLKPTTLRELER 631
Query: 611 FVTNYKKSLSKNKRKAELANQARAVAQQNVQQQTPAPVVTEVRKEI--RTDDRIGSTSSP 668
+V K L K +RK A+ + A+ + + E +KE+ R D G SS
Sbjct: 632 YV---KSCLQKKQRKPFSASGKKQAAKSKEE------LAQEKKKELEKRLQDVSGQLSSS 682
Query: 669 VQVEKQVDNGSRSSSSSS 686
+ ++ GS S S
Sbjct: 683 KKPARKEKPGSAPSGGPS 700
>gi|40788944|dbj|BAA05393.2| KIAA0043 [Homo sapiens]
Length = 731
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 78/154 (50%), Gaps = 19/154 (12%)
Query: 341 PPAESNKKSKLNGKKQAGN-------------ELAHGFGTGSKI---FKSCSALLEKLMK 384
PP K++K+ ++++G E+ G K+ + C ++L +++
Sbjct: 270 PPLSDPKQAKVVARRESGGRPIKPPKKDLEDGEVPQHAGKKGKLSEHLRYCDSILREMLS 329
Query: 385 HKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTF 441
KH W F PVD + L LHDY II+HPMDL TVK +++ Y + FA DVRL F
Sbjct: 330 KKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDGREYPDAQGFAADVRLMF 389
Query: 442 HNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
N YNP +V MA +L +FE ++ + E
Sbjct: 390 SNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE 423
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 52/91 (57%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD L L DY II++PMD+GT+K RL N+Y S E +D
Sbjct: 51 VVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDF 110
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN D+ +MA+ L KIF K
Sbjct: 111 NTMFTNCYIYNKPTDDIVLMAQALEKIFLQK 141
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 49/75 (65%), Gaps = 4/75 (5%)
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWELDR 610
M+YDEK++LS ++ LP EKL +V II+ R SL + DEIE+D +++ TL EL+R
Sbjct: 577 MSYDEKRQLSLDINRLPGEKLGRVVHIIQSREPSLRDSNPDEIEIDFETLKPTTLRELER 636
Query: 611 FVTNYKKSLSKNKRK 625
+V K L K +RK
Sbjct: 637 YV---KSCLQKKQRK 648
>gi|351702676|gb|EHB05595.1| Bromodomain-containing protein 2 [Heterocephalus glaber]
Length = 722
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 78/154 (50%), Gaps = 19/154 (12%)
Query: 341 PPAESNKKSKLNGKKQAGN-------------ELAHGFGTGSKI---FKSCSALLEKLMK 384
PP K++K+ ++++G E+ G K+ + C ++L +++
Sbjct: 224 PPLSDPKQAKVVARRESGGRPIKPPKKDLEDGEVPQHAGKKGKLSEHLRHCDSILREMLS 283
Query: 385 HKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTF 441
KH W F PVD + L LHDY II+HPMDL TVK +++ Y + FA D+RL F
Sbjct: 284 KKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDSREYPDAQGFAADIRLMF 343
Query: 442 HNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
N YNP +V MA +L +FE ++ + E
Sbjct: 344 SNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE 377
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 52/91 (57%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD L L DY II++PMD+GT+K RL N+Y S E +D
Sbjct: 5 VVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDF 64
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN D+ +MA+ L KIF K
Sbjct: 65 NTMFTNCYIYNKPTDDIVLMAQALEKIFLQK 95
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 49/75 (65%), Gaps = 4/75 (5%)
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWELDR 610
M+YDEK++LS ++ LP EKL +V II+ R SL + DEIE+D +++ TL EL+R
Sbjct: 569 MSYDEKRQLSLDINRLPGEKLGRVVHIIQSREPSLRDSNPDEIEIDFETLKPTTLRELER 628
Query: 611 FVTNYKKSLSKNKRK 625
+V K L K +RK
Sbjct: 629 YV---KSCLQKKQRK 640
>gi|281349316|gb|EFB24900.1| hypothetical protein PANDA_009517 [Ailuropoda melanoleuca]
Length = 696
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 65/113 (57%), Gaps = 3/113 (2%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G S+ + C ++L++++ KH W F PVD + L LHDY II+HPMDL TVK ++
Sbjct: 306 GKLSEHLRHCDSILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKM 365
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
+ Y + FA DVRL F N YNP +V MA +L +FE ++ + E
Sbjct: 366 DGREYADAQGFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE 418
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 52/91 (57%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD L L DY II++PMD+GT+K RL N+Y S E +D
Sbjct: 46 VVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDF 105
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN D+ +MA+ L KIF K
Sbjct: 106 NTMFTNCYIYNKPTDDIVLMAQALEKIFLQK 136
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 49/75 (65%), Gaps = 4/75 (5%)
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWELDR 610
M+YDEK++LS ++ LP EKL +V II+ R SL + DEIE+D +++ TL EL+R
Sbjct: 574 MSYDEKRQLSLDINRLPGEKLGRVVHIIQSREPSLRDSNPDEIEIDFETLKPTTLRELER 633
Query: 611 FVTNYKKSLSKNKRK 625
+V K L K +RK
Sbjct: 634 YV---KSCLQKKQRK 645
>gi|397503778|ref|XP_003822496.1| PREDICTED: bromodomain-containing protein 3 [Pan paniscus]
Length = 728
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 78/154 (50%), Gaps = 19/154 (12%)
Query: 341 PPAESNKKSKLNGKKQAGN-------------ELAHGFGTGSKI---FKSCSALLEKLMK 384
PP K++K+ ++++G E+ G K+ + C ++L +++
Sbjct: 265 PPLSDPKQAKVVARRESGGRPIKPPKKDLEDGEVPQHAGKKGKLSEHLRYCDSILREMLS 324
Query: 385 HKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTF 441
KH W F PVD + L LHDY II+HPMDL TVK +++ Y + FA DVRL F
Sbjct: 325 KKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDGREYPDAQGFAADVRLMF 384
Query: 442 HNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
N YNP +V MA +L +FE ++ + E
Sbjct: 385 SNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE 418
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 52/91 (57%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD L L DY II++PMD+GT+K RL N+Y S E +D
Sbjct: 46 VVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDF 105
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN D+ +MA+ L KIF K
Sbjct: 106 NTMFTNCYIYNKPTDDIVLMAQALEKIFLQK 136
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 73/138 (52%), Gaps = 12/138 (8%)
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWELDR 610
M+YDEK++LS ++ LP EKL +V II+ R SL + DEIE+D +++ TL EL+R
Sbjct: 574 MSYDEKRQLSLDINRLPGEKLGRVVHIIQSREPSLRDSNPDEIEIDFETLKPTTLRELER 633
Query: 611 FVTNYKKSLSKNKRKAELANQARAVAQQNVQQQTPAPVVTEVRKEI--RTDDRIGSTSSP 668
+V K L K +RK A+ + A+ + + E +KE+ R D G SS
Sbjct: 634 YV---KSCLQKKQRKPFSASGKKQAAKSKEE------LAQEKKKELEKRLQDVSGQLSSS 684
Query: 669 VQVEKQVDNGSRSSSSSS 686
+ ++ GS S S
Sbjct: 685 KKPARKEKPGSAPSGGPS 702
>gi|344309215|ref|XP_003423272.1| PREDICTED: bromodomain-containing protein 3 [Loxodonta africana]
Length = 727
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 77/148 (52%), Gaps = 19/148 (12%)
Query: 341 PPAESNKKSKLNGKKQAGN-------------ELAHGFGTGSKI---FKSCSALLEKLMK 384
PP K++K+ ++++G E+ G K+ + C ++L++++
Sbjct: 264 PPLSDPKQAKVVARRESGGRPIKPPKKDLEDGEVPQHAGKKGKLSEHLRYCDSILKEMLS 323
Query: 385 HKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTF 441
KH W F PVD + L LHDY II+HPMDL TVK +++ Y + FA D+RL F
Sbjct: 324 KKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMDSREYPDAQSFAADIRLMF 383
Query: 442 HNAMTYNPKGQDVHIMAEQLLKIFEDKW 469
N YNP +V MA +L +FE ++
Sbjct: 384 SNCYKYNPPDHEVVAMARKLQDVFEMRF 411
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 52/91 (57%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD L L DY II++PMD+GT+K RL ++Y S E +D
Sbjct: 45 VVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENSYYWSASECMQDF 104
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN D+ +MA+ L KIF K
Sbjct: 105 NTMFTNCYIYNKPTDDIVLMAQALEKIFLQK 135
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 49/75 (65%), Gaps = 4/75 (5%)
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWELDR 610
M+YDEK++LS ++ LP EKL +V II+ R SL + DEIE+D +++ TL EL+R
Sbjct: 573 MSYDEKRQLSLDINRLPGEKLGRVVHIIQSREPSLRDSNPDEIEIDFETLKPTTLRELER 632
Query: 611 FVTNYKKSLSKNKRK 625
+V K L K +RK
Sbjct: 633 YV---KSCLQKKQRK 644
>gi|354501563|ref|XP_003512860.1| PREDICTED: bromodomain-containing protein 3 isoform 1 [Cricetulus
griseus]
gi|344252302|gb|EGW08406.1| Bromodomain-containing protein 3 [Cricetulus griseus]
Length = 727
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 78/154 (50%), Gaps = 19/154 (12%)
Query: 341 PPAESNKKSKLNGKKQAGN-------------ELAHGFGTGSKI---FKSCSALLEKLMK 384
PP K++K+ ++++G E+ G K+ + C ++L +++
Sbjct: 265 PPLSEPKQAKVVARRESGGRPIKPPKKDLEDGEVPQHAGKKGKLSEHLRHCDSILREMLS 324
Query: 385 HKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTF 441
KH W F PVD + L LHDY II+HPMDL TVK +++ Y + FA D+RL F
Sbjct: 325 KKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDSREYPDAQGFAADIRLMF 384
Query: 442 HNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
N YNP +V MA +L +FE ++ + E
Sbjct: 385 SNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE 418
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 52/91 (57%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD L L DY II++PMD+GT+K RL N+Y S E +D
Sbjct: 46 VVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDF 105
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN D+ +MA+ L KIF K
Sbjct: 106 NTMFTNCYIYNKPTDDIVLMAQALEKIFLQK 136
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 49/75 (65%), Gaps = 4/75 (5%)
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWELDR 610
M+YDEK++LS ++ LP EKL +V II+ R SL + DEIE+D +++ TL EL+R
Sbjct: 574 MSYDEKRQLSLDINRLPGEKLGRVVHIIQSREPSLRDSNPDEIEIDFETLKPTTLRELER 633
Query: 611 FVTNYKKSLSKNKRK 625
+V K L K +RK
Sbjct: 634 YV---KSCLQKKQRK 645
>gi|11067749|ref|NP_031397.1| bromodomain-containing protein 3 [Homo sapiens]
gi|12643726|sp|Q15059.1|BRD3_HUMAN RecName: Full=Bromodomain-containing protein 3; AltName:
Full=RING3-like protein
gi|46241518|gb|AAS82952.1| endothelial differentiation inhibitory protein D18 [Homo sapiens]
gi|119608519|gb|EAW88113.1| bromodomain containing 3, isoform CRA_a [Homo sapiens]
gi|119608521|gb|EAW88115.1| bromodomain containing 3, isoform CRA_a [Homo sapiens]
gi|168274318|dbj|BAG09579.1| bromodomain-containing protein 3 [synthetic construct]
Length = 726
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 78/154 (50%), Gaps = 19/154 (12%)
Query: 341 PPAESNKKSKLNGKKQAGN-------------ELAHGFGTGSKI---FKSCSALLEKLMK 384
PP K++K+ ++++G E+ G K+ + C ++L +++
Sbjct: 265 PPLSDPKQAKVVARRESGGRPIKPPKKDLEDGEVPQHAGKKGKLSEHLRYCDSILREMLS 324
Query: 385 HKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTF 441
KH W F PVD + L LHDY II+HPMDL TVK +++ Y + FA DVRL F
Sbjct: 325 KKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDGREYPDAQGFAADVRLMF 384
Query: 442 HNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
N YNP +V MA +L +FE ++ + E
Sbjct: 385 SNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE 418
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 52/91 (57%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD L L DY II++PMD+GT+K RL N+Y S E +D
Sbjct: 46 VVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDF 105
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN D+ +MA+ L KIF K
Sbjct: 106 NTMFTNCYIYNKPTDDIVLMAQALEKIFLQK 136
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 73/138 (52%), Gaps = 12/138 (8%)
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWELDR 610
M+YDEK++LS ++ LP EKL +V II+ R SL + DEIE+D +++ TL EL+R
Sbjct: 572 MSYDEKRQLSLDINRLPGEKLGRVVHIIQSREPSLRDSNPDEIEIDFETLKPTTLRELER 631
Query: 611 FVTNYKKSLSKNKRKAELANQARAVAQQNVQQQTPAPVVTEVRKEI--RTDDRIGSTSSP 668
+V K L K +RK A+ + A+ + + E +KE+ R D G SS
Sbjct: 632 YV---KSCLQKKQRKPFSASGKKQAAKSKEE------LAQEKKKELEKRLQDVSGQLSSS 682
Query: 669 VQVEKQVDNGSRSSSSSS 686
+ ++ GS S S
Sbjct: 683 KKPARKEKPGSAPSGGPS 700
>gi|354501565|ref|XP_003512861.1| PREDICTED: bromodomain-containing protein 3 isoform 2 [Cricetulus
griseus]
Length = 744
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 78/154 (50%), Gaps = 19/154 (12%)
Query: 341 PPAESNKKSKLNGKKQAGN-------------ELAHGFGTGSKI---FKSCSALLEKLMK 384
PP K++K+ ++++G E+ G K+ + C ++L +++
Sbjct: 265 PPLSEPKQAKVVARRESGGRPIKPPKKDLEDGEVPQHAGKKGKLSEHLRHCDSILREMLS 324
Query: 385 HKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTF 441
KH W F PVD + L LHDY II+HPMDL TVK +++ Y + FA D+RL F
Sbjct: 325 KKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDSREYPDAQGFAADIRLMF 384
Query: 442 HNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
N YNP +V MA +L +FE ++ + E
Sbjct: 385 SNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE 418
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 52/91 (57%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD L L DY II++PMD+GT+K RL N+Y S E +D
Sbjct: 46 VVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDF 105
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN D+ +MA+ L KIF K
Sbjct: 106 NTMFTNCYIYNKPTDDIVLMAQALEKIFLQK 136
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 49/75 (65%), Gaps = 4/75 (5%)
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWELDR 610
M+YDEK++LS ++ LP EKL +V II+ R SL + DEIE+D +++ TL EL+R
Sbjct: 591 MSYDEKRQLSLDINRLPGEKLGRVVHIIQSREPSLRDSNPDEIEIDFETLKPTTLRELER 650
Query: 611 FVTNYKKSLSKNKRK 625
+V K L K +RK
Sbjct: 651 YV---KSCLQKKQRK 662
>gi|297685659|ref|XP_002820401.1| PREDICTED: bromodomain-containing protein 3 [Pongo abelii]
Length = 726
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 78/154 (50%), Gaps = 19/154 (12%)
Query: 341 PPAESNKKSKLNGKKQAGN-------------ELAHGFGTGSKI---FKSCSALLEKLMK 384
PP K++K+ ++++G E+ G K+ + C ++L +++
Sbjct: 265 PPLSDPKQAKVVARRESGGRPIKPPKKDLEDGEVPQHAGKKGKLSEHLRYCDSILREMLS 324
Query: 385 HKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTF 441
KH W F PVD + L LHDY II+HPMDL TVK +++ Y + FA DVRL F
Sbjct: 325 KKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDGREYPDAQGFAADVRLMF 384
Query: 442 HNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
N YNP +V MA +L +FE ++ + E
Sbjct: 385 SNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE 418
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 52/91 (57%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD L L DY II++PMD+GT+K RL N+Y S E +D
Sbjct: 46 VVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDF 105
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN D+ +MA+ L KIF K
Sbjct: 106 NTMFTNCYIYNKPTDDIVLMAQALEKIFLQK 136
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 49/75 (65%), Gaps = 4/75 (5%)
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWELDR 610
M+YDEK++LS ++ LP EKL +V II+ R SL + DEIE+D +++ TL EL+R
Sbjct: 572 MSYDEKRQLSLDINRLPGEKLGRVVHIIQSREPSLRDSNPDEIEIDFETLKPTTLRELER 631
Query: 611 FVTNYKKSLSKNKRK 625
+V K L K +RK
Sbjct: 632 YV---KSCLQKKQRK 643
>gi|402896155|ref|XP_003911172.1| PREDICTED: bromodomain-containing protein 3 [Papio anubis]
Length = 726
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 78/154 (50%), Gaps = 19/154 (12%)
Query: 341 PPAESNKKSKLNGKKQAGN-------------ELAHGFGTGSKI---FKSCSALLEKLMK 384
PP K++K+ ++++G E+ G K+ + C ++L +++
Sbjct: 265 PPLSDPKQAKVVARRESGGRPIKPPKKDLEDGEVPQHAGKKGKLSEHLRYCDSILREMLS 324
Query: 385 HKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTF 441
KH W F PVD + L LHDY II+HPMDL TVK +++ Y + FA DVRL F
Sbjct: 325 KKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDGREYPDAQGFAADVRLMF 384
Query: 442 HNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
N YNP +V MA +L +FE ++ + E
Sbjct: 385 SNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE 418
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 52/91 (57%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD L L DY II++PMD+GT+K RL N+Y S E +D
Sbjct: 46 VVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDF 105
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN D+ +MA+ L KIF K
Sbjct: 106 NTMFTNCYIYNKPTDDIVLMAQALEKIFLQK 136
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 49/75 (65%), Gaps = 4/75 (5%)
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWELDR 610
M+YDEK++LS ++ LP EKL +V II+ R SL + DEIE+D +++ TL EL+R
Sbjct: 572 MSYDEKRQLSLDINRLPGEKLGRVVHIIQSREPSLRDSNPDEIEIDFETLKPTTLRELER 631
Query: 611 FVTNYKKSLSKNKRK 625
+V K L K +RK
Sbjct: 632 YV---KSCLQKKQRK 643
>gi|332255339|ref|XP_003276790.1| PREDICTED: bromodomain-containing protein 3 [Nomascus leucogenys]
Length = 726
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 78/154 (50%), Gaps = 19/154 (12%)
Query: 341 PPAESNKKSKLNGKKQAGN-------------ELAHGFGTGSKI---FKSCSALLEKLMK 384
PP K++K+ ++++G E+ G K+ + C ++L +++
Sbjct: 265 PPLSDPKQAKVVARRESGGRPIKPPKKDLEDGEVPQHAGKKGKLSEHLRYCDSILREMLS 324
Query: 385 HKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTF 441
KH W F PVD + L LHDY II+HPMDL TVK +++ Y + FA DVRL F
Sbjct: 325 KKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDGREYPDAQGFAADVRLMF 384
Query: 442 HNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
N YNP +V MA +L +FE ++ + E
Sbjct: 385 SNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE 418
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 52/91 (57%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD L L DY II++PMD+GT+K RL N+Y S E +D
Sbjct: 46 VVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDF 105
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN D+ +MA+ L KIF K
Sbjct: 106 NTMFTNCYIYNKPTDDIVLMAQALEKIFLQK 136
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 49/75 (65%), Gaps = 4/75 (5%)
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWELDR 610
M+YDEK++LS ++ LP EKL +V II+ R SL + DEIE+D +++ TL EL+R
Sbjct: 572 MSYDEKRQLSLDINRLPGEKLGRVVHIIQSREPSLRDSNPDEIEIDFETLKPTTLRELER 631
Query: 611 FVTNYKKSLSKNKRK 625
+V K L K +RK
Sbjct: 632 YV---KSCLQKKQRK 643
>gi|145347731|ref|XP_001418315.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578544|gb|ABO96608.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 610
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/118 (45%), Positives = 67/118 (56%), Gaps = 7/118 (5%)
Query: 363 HGFGTGSK------IFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLG 416
HGF T + K C + + +LM HK G+ F+APVD LGL Y II PMDLG
Sbjct: 268 HGFNTLRYRCLLEIVHKQCLSAVRQLMAHKWGFPFSAPVDPDALGLPTYREIITEPMDLG 327
Query: 417 TVKTRL-NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIE 473
T+K + N Y +E DVRLTF NAM +N +G DVH MA LL +E KW I+
Sbjct: 328 TIKKLIENGGKYVMAEEVDADVRLTFANAMKFNNEGTDVHTMACGLLDEWEPKWEAIK 385
>gi|355752948|gb|EHH56994.1| hypothetical protein EGM_06545 [Macaca fascicularis]
Length = 726
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 78/154 (50%), Gaps = 19/154 (12%)
Query: 341 PPAESNKKSKLNGKKQAGN-------------ELAHGFGTGSKI---FKSCSALLEKLMK 384
PP K++K+ ++++G E+ G K+ + C ++L +++
Sbjct: 265 PPLSDPKQAKVVARRESGGRPIKPPKKDLEDGEVPQHAGKKGKLSEHLRYCDSILREMLS 324
Query: 385 HKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTF 441
KH W F PVD + L LHDY II+HPMDL TVK +++ Y + FA DVRL F
Sbjct: 325 KKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDGREYPDAQGFAADVRLMF 384
Query: 442 HNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
N YNP +V MA +L +FE ++ + E
Sbjct: 385 SNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE 418
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 52/91 (57%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD L L DY II++PMD+GT+K RL N+Y S E +D
Sbjct: 46 VVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDF 105
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN D+ +MA+ L KIF K
Sbjct: 106 NTMFTNCYIYNKPTDDIVLMAQALEKIFLQK 136
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 49/75 (65%), Gaps = 4/75 (5%)
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWELDR 610
M+YDEK++LS ++ LP EKL +V II+ R SL + DEIE+D +++ TL EL+R
Sbjct: 572 MSYDEKRQLSLDINRLPGEKLGRVVHIIQSREPSLRDSNPDEIEIDFETLKPTTLRELER 631
Query: 611 FVTNYKKSLSKNKRK 625
+V K L K +RK
Sbjct: 632 YV---KSCLQKKQRK 643
>gi|149237571|ref|XP_001524662.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146451259|gb|EDK45515.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 788
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 64/102 (62%), Gaps = 3/102 (2%)
Query: 372 FKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
+ C +++LM KH + F APVD L + +Y I++HPMD GT++++L N Y+
Sbjct: 434 LRFCGQTIKELMSKKHQNYNFPFLAPVDAVALNIPNYHDIVKHPMDFGTIQSKLTNNQYE 493
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWV 470
S +F +DV+L FHN +NP+G DV++M ++ +F+ KW
Sbjct: 494 SGDDFEKDVKLVFHNCYLFNPEGTDVNMMGHRMEAVFDKKWA 535
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 38/80 (47%)
Query: 391 FNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPK 450
F PVD L + Y+ I PMDL T++ +LN Y+ +FA+D L N +N +
Sbjct: 278 FLHPVDTVKLNIPFYYNYIPRPMDLSTIERKLNAKAYEDISQFADDFNLMVANCKKFNGE 337
Query: 451 GQDVHIMAEQLLKIFEDKWV 470
+ MA + FE +
Sbjct: 338 TAGISRMATNIQAHFEKHML 357
>gi|255567701|ref|XP_002524829.1| bromodomain-containing protein, putative [Ricinus communis]
gi|223535889|gb|EEF37549.1| bromodomain-containing protein, putative [Ricinus communis]
Length = 515
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/92 (51%), Positives = 60/92 (65%)
Query: 394 PVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQD 453
PVD L + DYF+II +PMDLGTVK++L N Y +EFA DVRLTF NA NP
Sbjct: 91 PVDPDKLQIPDYFSIITNPMDLGTVKSKLENNQYFESEEFAADVRLTFSNASLCNPPPNY 150
Query: 454 VHIMAEQLLKIFEDKWVVIESEYNREMRIGAD 485
VH M E+L KIFE +W +E ++N ++ G D
Sbjct: 151 VHNMVEKLKKIFETRWKALEEKWNYQVPKGGD 182
>gi|114627431|ref|XP_001170358.1| PREDICTED: bromodomain-containing protein 3 isoform 8 [Pan
troglodytes]
gi|410223876|gb|JAA09157.1| bromodomain containing 3 [Pan troglodytes]
gi|410253994|gb|JAA14964.1| bromodomain containing 3 [Pan troglodytes]
gi|410301574|gb|JAA29387.1| bromodomain containing 3 [Pan troglodytes]
gi|410339465|gb|JAA38679.1| bromodomain containing 3 [Pan troglodytes]
Length = 726
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 78/154 (50%), Gaps = 19/154 (12%)
Query: 341 PPAESNKKSKLNGKKQAGN-------------ELAHGFGTGSKI---FKSCSALLEKLMK 384
PP K++K+ ++++G E+ G K+ + C ++L +++
Sbjct: 265 PPLSDPKQAKVVARRESGGRPIKPPKKDLEDGEVPQHAGKKGKLSEHLRYCDSILREMLS 324
Query: 385 HKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTF 441
KH W F PVD + L LHDY II+HPMDL TVK +++ Y + FA DVRL F
Sbjct: 325 KKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDGREYPDAQGFAADVRLMF 384
Query: 442 HNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
N YNP +V MA +L +FE ++ + E
Sbjct: 385 SNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE 418
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 52/91 (57%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD L L DY II++PMD+GT+K RL N+Y S E +D
Sbjct: 46 VVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDF 105
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN D+ +MA+ L KIF K
Sbjct: 106 NTMFTNCYIYNKPTDDIVLMAQALEKIFLQK 136
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 73/138 (52%), Gaps = 12/138 (8%)
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWELDR 610
M+YDEK++LS ++ LP EKL +V II+ R SL + DEIE+D +++ TL EL+R
Sbjct: 572 MSYDEKRQLSLDINRLPGEKLGRVVHIIQSREPSLRDSNPDEIEIDFETLKPTTLRELER 631
Query: 611 FVTNYKKSLSKNKRKAELANQARAVAQQNVQQQTPAPVVTEVRKEI--RTDDRIGSTSSP 668
+V K L K +RK A+ + A+ + + E +KE+ R D G SS
Sbjct: 632 YV---KSCLQKKQRKPFSASGKKQAAKSKEE------LAQEKKKELEKRLQDVSGQLSSS 682
Query: 669 VQVEKQVDNGSRSSSSSS 686
+ ++ GS S S
Sbjct: 683 KKPARKEKPGSAPSGGPS 700
>gi|198425802|ref|XP_002127242.1| PREDICTED: similar to bromodomain-containing protein 2 [Ciona
intestinalis]
Length = 1083
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 73/131 (55%), Gaps = 6/131 (4%)
Query: 351 LNGKKQAGNELAHGFGTGSKI---FKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHD 404
L+ ++ G+EL + K+ K C+ LL+ KH W F VD LGLHD
Sbjct: 335 LDSEEGVGDELHNKRPKMVKLTEQMKYCNNLLKDFFSKKHASFSWPFYKSVDADLLGLHD 394
Query: 405 YFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKI 464
Y+ +I++PMDLGT++ ++ Y++P EFA D+RL N YNP DV MA++L +
Sbjct: 395 YYDMIKNPMDLGTMRKKMESREYRTPDEFAYDMRLIVTNCYKYNPPDHDVVAMAKKLSDV 454
Query: 465 FEDKWVVIESE 475
FE K+ + E
Sbjct: 455 FEMKFAKMPDE 465
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 51/92 (55%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
++ L KH W F+ PVD LGL DYF II+HPMD+ +K +L N Y S KE +D
Sbjct: 45 VVMTSLWKHHFAWPFHVPVDPVKLGLPDYFDIIKHPMDMALIKKKLETNQYYSAKECLQD 104
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
L F N YN DV +MA+ L K F K
Sbjct: 105 FNLMFSNCYIYNKPTDDVVLMAQTLEKNFLQK 136
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 12/73 (16%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWEL 608
+ MTYDEK++LS ++ LP +KL +V II+ R SL + DEIE+D +++ TL
Sbjct: 648 KPMTYDEKRQLSLDINKLPGDKLGRVVHIIQTREPSLKDSNPDEIEIDFETLKPSTL--- 704
Query: 609 DRFVTNYKKSLSK 621
+ L K
Sbjct: 705 --------RELEK 709
>gi|165972335|ref|NP_001107046.1| bromodomain-containing protein 3 isoform 1 [Mus musculus]
gi|62485072|dbj|BAD91008.2| Orfx [Mus musculus]
gi|148676418|gb|EDL08365.1| bromodomain containing 3, isoform CRA_a [Mus musculus]
Length = 743
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 78/154 (50%), Gaps = 19/154 (12%)
Query: 341 PPAESNKKSKLNGKKQAGN-------------ELAHGFGTGSKI---FKSCSALLEKLMK 384
PP K++K+ ++++G E+ G K+ + C ++L +++
Sbjct: 264 PPLSEPKQAKVVARRESGGRPIKPPKKDLEDGEVPQHAGKKGKLSEHLRHCDSILREMLS 323
Query: 385 HKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTF 441
KH W F PVD + L LHDY II+HPMDL TVK +++ Y + FA D+RL F
Sbjct: 324 KKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDSREYPDAQGFAADIRLMF 383
Query: 442 HNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
N YNP +V MA +L +FE ++ + E
Sbjct: 384 SNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE 417
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 52/91 (57%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD L L DY II++PMD+GT+K RL N+Y S E +D
Sbjct: 45 VVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDF 104
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN D+ +MA+ L KIF K
Sbjct: 105 NTMFTNCYIYNKPTDDIVLMAQALEKIFLQK 135
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 49/75 (65%), Gaps = 4/75 (5%)
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWELDR 610
M+YDEK++LS ++ LP EKL +V II+ R SL + DEIE+D +++ TL EL+R
Sbjct: 590 MSYDEKRQLSLDINRLPGEKLGRVVHIIQSREPSLRDSNPDEIEIDFETLKPTTLRELER 649
Query: 611 FVTNYKKSLSKNKRK 625
+V K L K +RK
Sbjct: 650 YV---KSCLQKKQRK 661
>gi|8575733|gb|AAF78072.1| bromodomain-containing FSH-like protein FSRG2 [Mus musculus]
gi|46241516|gb|AAS82951.1| endothelial differentiation inhibitory protein D18 [Mus musculus]
Length = 726
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 78/154 (50%), Gaps = 19/154 (12%)
Query: 341 PPAESNKKSKLNGKKQAGN-------------ELAHGFGTGSKI---FKSCSALLEKLMK 384
PP K++K+ ++++G E+ G K+ + C ++L +++
Sbjct: 264 PPLSEPKQAKVVARRESGGRPIKPPKKDLEDGEVPQHAGKKGKLSEHLRHCDSILREMLS 323
Query: 385 HKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTF 441
KH W F PVD + L LHDY II+HPMDL TVK +++ Y + FA D+RL F
Sbjct: 324 KKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDSREYPDAQGFAADIRLMF 383
Query: 442 HNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
N YNP +V MA +L +FE ++ + E
Sbjct: 384 SNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE 417
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 52/91 (57%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD L L DY II++PMD+GT+K RL N+Y S E +D
Sbjct: 45 VVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDF 104
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN D+ +MA+ L KIF K
Sbjct: 105 NTMFTNCYIYNKPTDDIVLMAQALEKIFLQK 135
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 49/75 (65%), Gaps = 4/75 (5%)
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWELDR 610
M+YDEK++LS ++ LP EKL +V II+ R SL + DEIE+D +++ TL EL+R
Sbjct: 573 MSYDEKRQLSLDINRLPGEKLGRVVHIIQSREPSLRDSNPDEIEIDFETLKPTTLRELER 632
Query: 611 FVTNYKKSLSKNKRK 625
+V K L K +RK
Sbjct: 633 YV---KSCLQKKQRK 644
>gi|21594631|gb|AAH31536.1| Bromodomain containing 3 [Mus musculus]
Length = 726
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 78/154 (50%), Gaps = 19/154 (12%)
Query: 341 PPAESNKKSKLNGKKQAGN-------------ELAHGFGTGSKI---FKSCSALLEKLMK 384
PP K++K+ ++++G E+ G K+ + C ++L +++
Sbjct: 264 PPLSEPKQAKVVARRESGGRPIKPPKKDLEDGEVPQHAGKKGKLSEHLRHCDSILREMLS 323
Query: 385 HKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTF 441
KH W F PVD + L LHDY II+HPMDL TVK +++ Y + FA D+RL F
Sbjct: 324 KKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDSREYPDAQGFAADIRLMF 383
Query: 442 HNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
N YNP +V MA +L +FE ++ + E
Sbjct: 384 SNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE 417
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 52/91 (57%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD L L DY II++PMD+GT+K RL N+Y S E +D
Sbjct: 45 VVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDF 104
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN D+ +MA+ L KIF K
Sbjct: 105 NTMFTNCYIYNKPTDDIVLMAQALEKIFLQK 135
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 49/75 (65%), Gaps = 4/75 (5%)
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWELDR 610
M+YDEK++LS ++ LP EKL +V II+ R SL + DEIE+D +++ TL EL+R
Sbjct: 573 MSYDEKRQLSLDINRLPGEKLGRVVHIIQSREPSLRDSNPDEIEIDFETLKPTTLRELER 632
Query: 611 FVTNYKKSLSKNKRK 625
+V K L K +RK
Sbjct: 633 YV---KSCLQKKQRK 644
>gi|165972331|ref|NP_001107045.1| bromodomain-containing protein 3 isoform 2 [Mus musculus]
gi|165972333|ref|NP_075825.3| bromodomain-containing protein 3 isoform 2 [Mus musculus]
gi|47115837|sp|Q8K2F0.2|BRD3_MOUSE RecName: Full=Bromodomain-containing protein 3; AltName:
Full=Bromodomain-containing FSH-like protein FSRG2
gi|74141421|dbj|BAE35988.1| unnamed protein product [Mus musculus]
gi|74195657|dbj|BAE39636.1| unnamed protein product [Mus musculus]
gi|74204674|dbj|BAE35406.1| unnamed protein product [Mus musculus]
gi|148676422|gb|EDL08369.1| bromodomain containing 3, isoform CRA_d [Mus musculus]
Length = 726
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 78/154 (50%), Gaps = 19/154 (12%)
Query: 341 PPAESNKKSKLNGKKQAGN-------------ELAHGFGTGSKI---FKSCSALLEKLMK 384
PP K++K+ ++++G E+ G K+ + C ++L +++
Sbjct: 264 PPLSEPKQAKVVARRESGGRPIKPPKKDLEDGEVPQHAGKKGKLSEHLRHCDSILREMLS 323
Query: 385 HKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTF 441
KH W F PVD + L LHDY II+HPMDL TVK +++ Y + FA D+RL F
Sbjct: 324 KKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDSREYPDAQGFAADIRLMF 383
Query: 442 HNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
N YNP +V MA +L +FE ++ + E
Sbjct: 384 SNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE 417
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 52/91 (57%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD L L DY II++PMD+GT+K RL N+Y S E +D
Sbjct: 45 VVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDF 104
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN D+ +MA+ L KIF K
Sbjct: 105 NTMFTNCYIYNKPTDDIVLMAQALEKIFLQK 135
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 49/75 (65%), Gaps = 4/75 (5%)
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWELDR 610
M+YDEK++LS ++ LP EKL +V II+ R SL + DEIE+D +++ TL EL+R
Sbjct: 573 MSYDEKRQLSLDINRLPGEKLGRVVHIIQSREPSLRDSNPDEIEIDFETLKPTTLRELER 632
Query: 611 FVTNYKKSLSKNKRK 625
+V K L K +RK
Sbjct: 633 YV---KSCLQKKQRK 644
>gi|296482055|tpg|DAA24170.1| TPA: bromodomain containing protein 3 [Bos taurus]
Length = 722
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 63/108 (58%), Gaps = 3/108 (2%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G S+ + C ++L++++ KH W F PVD + L LHDY II+HPMDL TVK ++
Sbjct: 306 GRLSEHLRHCDSILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKM 365
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWV 470
+ Y + FA D+RL F N YNP +V MA +L +FE ++
Sbjct: 366 DSREYPDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFA 413
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 52/91 (57%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD L L DY II++PMD+GT+K RL N+Y S E +D
Sbjct: 46 VVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDF 105
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN D+ +MA+ L KIF K
Sbjct: 106 NTMFTNCYIYNKPTDDIVLMAQALEKIFLQK 136
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 49/75 (65%), Gaps = 4/75 (5%)
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWELDR 610
M+YDEK++LS ++ LP EKL +V II+ R SL + DEIE+D +++ TL EL+R
Sbjct: 568 MSYDEKRQLSLDINRLPGEKLGRVVHIIQSREPSLRDSNPDEIEIDFETLKPTTLRELER 627
Query: 611 FVTNYKKSLSKNKRK 625
+V K L K +RK
Sbjct: 628 YV---KSCLQKKQRK 639
>gi|116003963|ref|NP_001070341.1| bromodomain-containing protein 3 [Bos taurus]
gi|115305162|gb|AAI23579.1| Bromodomain containing 3 [Bos taurus]
Length = 722
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 63/108 (58%), Gaps = 3/108 (2%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G S+ + C ++L++++ KH W F PVD + L LHDY II+HPMDL TVK ++
Sbjct: 306 GRLSEHLRHCDSILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKM 365
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWV 470
+ Y + FA D+RL F N YNP +V MA +L +FE ++
Sbjct: 366 DSREYPDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFA 413
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 52/91 (57%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD L L DY II++PMD+GT+K RL N+Y S E +D
Sbjct: 46 VVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDF 105
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN D+ +MA+ L KIF K
Sbjct: 106 NTMFTNCYIYNKPTDDIVLMAQALEKIFLQK 136
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 49/75 (65%), Gaps = 4/75 (5%)
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWELDR 610
M+YDEK++LS ++ LP EKL +V II+ R SL + DEIE+D +++ TL EL+R
Sbjct: 568 MSYDEKRQLSLDINRLPGEKLGRVVHIIQSREPSLRDSNPDEIEIDFETLKPTTLRELER 627
Query: 611 FVTNYKKSLSKNKRK 625
+V K L K +RK
Sbjct: 628 YV---KSCLQKKQRK 639
>gi|148676419|gb|EDL08366.1| bromodomain containing 3, isoform CRA_b [Mus musculus]
gi|148676420|gb|EDL08367.1| bromodomain containing 3, isoform CRA_b [Mus musculus]
Length = 731
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 78/154 (50%), Gaps = 19/154 (12%)
Query: 341 PPAESNKKSKLNGKKQAGN-------------ELAHGFGTGSKI---FKSCSALLEKLMK 384
PP K++K+ ++++G E+ G K+ + C ++L +++
Sbjct: 269 PPLSEPKQAKVVARRESGGRPIKPPKKDLEDGEVPQHAGKKGKLSEHLRHCDSILREMLS 328
Query: 385 HKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTF 441
KH W F PVD + L LHDY II+HPMDL TVK +++ Y + FA D+RL F
Sbjct: 329 KKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDSREYPDAQGFAADIRLMF 388
Query: 442 HNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
N YNP +V MA +L +FE ++ + E
Sbjct: 389 SNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE 422
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 52/91 (57%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD L L DY II++PMD+GT+K RL N+Y S E +D
Sbjct: 50 VVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDF 109
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN D+ +MA+ L KIF K
Sbjct: 110 NTMFTNCYIYNKPTDDIVLMAQALEKIFLQK 140
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 49/75 (65%), Gaps = 4/75 (5%)
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWELDR 610
M+YDEK++LS ++ LP EKL +V II+ R SL + DEIE+D +++ TL EL+R
Sbjct: 578 MSYDEKRQLSLDINRLPGEKLGRVVHIIQSREPSLRDSNPDEIEIDFETLKPTTLRELER 637
Query: 611 FVTNYKKSLSKNKRK 625
+V K L K +RK
Sbjct: 638 YV---KSCLQKKQRK 649
>gi|403301507|ref|XP_003941429.1| PREDICTED: bromodomain-containing protein 3 [Saimiri boliviensis
boliviensis]
Length = 726
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 78/154 (50%), Gaps = 19/154 (12%)
Query: 341 PPAESNKKSKLNGKKQAGN-------------ELAHGFGTGSKI---FKSCSALLEKLMK 384
PP K++K+ ++++G E+ G K+ + C ++L +++
Sbjct: 265 PPLSDPKQAKVVARRESGGRPIKPPKKDLEDGEVPQHAGKKGKLSEHLRYCDSILREMLS 324
Query: 385 HKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTF 441
KH W F PVD + L LHDY II+HPMDL TVK +++ Y + FA DVRL F
Sbjct: 325 KKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDGREYPDAQGFAADVRLMF 384
Query: 442 HNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
N YNP +V MA +L +FE ++ + E
Sbjct: 385 SNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE 418
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 52/91 (57%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD L L DY II++PMD+GT+K RL N+Y S E +D
Sbjct: 46 VVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDF 105
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN D+ +MA+ L KIF K
Sbjct: 106 NTMFTNCYIYNKPTDDIVLMAQALEKIFLQK 136
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 73/138 (52%), Gaps = 12/138 (8%)
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWELDR 610
M+YDEK++LS ++ LP EKL +V II+ R SL + DEIE+D +++ TL EL+R
Sbjct: 572 MSYDEKRQLSLDINRLPGEKLGRVVHIIQSREPSLRDSNPDEIEIDFETLKPTTLRELER 631
Query: 611 FVTNYKKSLSKNKRKAELANQARAVAQQNVQQQTPAPVVTEVRKEI--RTDDRIGSTSSP 668
+V K L K +RK A+ + A+ + + E +KE+ R D G SS
Sbjct: 632 YV---KSCLQKKQRKPFSASGKKQAAKSKEE------LAQEKKKELEKRLQDVSGQLSSS 682
Query: 669 VQVEKQVDNGSRSSSSSS 686
+ ++ GS S S
Sbjct: 683 KKPARKEKPGSAPSGGPS 700
>gi|348574826|ref|XP_003473191.1| PREDICTED: bromodomain-containing protein 3-like [Cavia porcellus]
Length = 725
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 64/113 (56%), Gaps = 3/113 (2%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G S+ + C ++L +++ KH W F PVD + L LHDY II+HPMDL TVK ++
Sbjct: 306 GKLSEHLRHCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKM 365
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
+ Y + FA D+RL F N YNP +V MA +L +FE ++ + E
Sbjct: 366 DSREYPDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE 418
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 51/91 (56%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L +H+ W F PVD L L DY II++PMD+GT+K RL +Y S E +D
Sbjct: 46 VVKTLWRHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENTYYWSASECMQDF 105
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN D+ +MA+ L KIF K
Sbjct: 106 NTMFTNCYIYNKPTDDIVLMAQALEKIFLQK 136
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 49/75 (65%), Gaps = 4/75 (5%)
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWELDR 610
M+YDEK++LS ++ LP EKL +V II+ R SL + DEIE+D +++ TL EL+R
Sbjct: 572 MSYDEKRQLSLDINRLPGEKLGRVVHIIQSREPSLRDSNPDEIEIDFETLKPTTLRELER 631
Query: 611 FVTNYKKSLSKNKRK 625
+V K L K +RK
Sbjct: 632 YV---KSCLQKKQRK 643
>gi|157819431|ref|NP_001102045.1| bromodomain-containing protein 3 [Rattus norvegicus]
gi|149039215|gb|EDL93435.1| bromodomain containing 3 (predicted), isoform CRA_b [Rattus
norvegicus]
Length = 725
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 78/154 (50%), Gaps = 19/154 (12%)
Query: 341 PPAESNKKSKLNGKKQAGN-------------ELAHGFGTGSKI---FKSCSALLEKLMK 384
PP K++K+ ++++G E+ G K+ + C ++L +++
Sbjct: 265 PPLSEPKQAKVVARRESGGRPIKPPKKDLEDGEVPQHAGKKGKLSEHLRHCDSILREMLS 324
Query: 385 HKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTF 441
KH W F PVD + L LHDY II+HPMDL TVK +++ Y + FA D+RL F
Sbjct: 325 KKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDSREYPDAQGFAADIRLMF 384
Query: 442 HNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
N YNP +V MA +L +FE ++ + E
Sbjct: 385 SNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE 418
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 52/91 (57%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD L L DY II++PMD+GT+K RL N+Y S E +D
Sbjct: 46 VVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDF 105
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN D+ +MA+ L KIF K
Sbjct: 106 NTMFTNCYIYNKPTDDIVLMAQALEKIFLQK 136
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 49/75 (65%), Gaps = 4/75 (5%)
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWELDR 610
M+YDEK++LS ++ LP EKL +V II+ R SL + DEIE+D +++ TL EL+R
Sbjct: 572 MSYDEKRQLSLDINRLPGEKLGRVVHIIQSREPSLRDSNPDEIEIDFETLKPTTLRELER 631
Query: 611 FVTNYKKSLSKNKRK 625
+V K L K +RK
Sbjct: 632 YV---KSCLQKKQRK 643
>gi|149039214|gb|EDL93434.1| bromodomain containing 3 (predicted), isoform CRA_a [Rattus
norvegicus]
gi|197246453|gb|AAI68949.1| Brd3 protein [Rattus norvegicus]
Length = 742
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 78/154 (50%), Gaps = 19/154 (12%)
Query: 341 PPAESNKKSKLNGKKQAGN-------------ELAHGFGTGSKI---FKSCSALLEKLMK 384
PP K++K+ ++++G E+ G K+ + C ++L +++
Sbjct: 265 PPLSEPKQAKVVARRESGGRPIKPPKKDLEDGEVPQHAGKKGKLSEHLRHCDSILREMLS 324
Query: 385 HKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTF 441
KH W F PVD + L LHDY II+HPMDL TVK +++ Y + FA D+RL F
Sbjct: 325 KKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDSREYPDAQGFAADIRLMF 384
Query: 442 HNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
N YNP +V MA +L +FE ++ + E
Sbjct: 385 SNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE 418
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 52/91 (57%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD L L DY II++PMD+GT+K RL N+Y S E +D
Sbjct: 46 VVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDF 105
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN D+ +MA+ L KIF K
Sbjct: 106 NTMFTNCYIYNKPTDDIVLMAQALEKIFLQK 136
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 49/75 (65%), Gaps = 4/75 (5%)
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWELDR 610
M+YDEK++LS ++ LP EKL +V II+ R SL + DEIE+D +++ TL EL+R
Sbjct: 589 MSYDEKRQLSLDINRLPGEKLGRVVHIIQSREPSLRDSNPDEIEIDFETLKPTTLRELER 648
Query: 611 FVTNYKKSLSKNKRK 625
+V K L K +RK
Sbjct: 649 YV---KSCLQKKQRK 660
>gi|350597125|ref|XP_003484360.1| PREDICTED: bromodomain-containing protein 3 [Sus scrofa]
Length = 726
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 64/113 (56%), Gaps = 3/113 (2%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G S+ + C ++L +++ KH W F PVD + L LHDY II+HPMDL TVK ++
Sbjct: 306 GRLSEHLRHCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKM 365
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
+ Y + FA D+RL F N YNP +V MA +L +FE ++ + E
Sbjct: 366 DSREYPDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE 418
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 52/91 (57%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD L L DY II++PMD+GT+K RL N+Y S E +D
Sbjct: 46 VVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDF 105
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN D+ +MA+ L KIF K
Sbjct: 106 NTMFTNCYIYNKPTDDIVLMAQALEKIFLQK 136
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 49/75 (65%), Gaps = 4/75 (5%)
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWELDR 610
M+YDEK++LS ++ LP EKL +V II+ R SL + DEIE+D +++ TL EL+R
Sbjct: 572 MSYDEKRQLSLDINRLPGEKLGRVVHIIQSREPSLRDSNPDEIEIDFETLKPTTLRELER 631
Query: 611 FVTNYKKSLSKNKRK 625
+V K L K +RK
Sbjct: 632 YV---KACLQKKQRK 643
>gi|156914867|gb|AAI52645.1| Brd3b protein [Danio rerio]
gi|163916192|gb|AAI57602.1| LOC100135304 protein [Xenopus (Silurana) tropicalis]
Length = 483
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/133 (38%), Positives = 68/133 (51%), Gaps = 20/133 (15%)
Query: 346 NKKSKLNGKKQAGNELAHGFGTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGL 402
NKKSKLNG K C +L++++ KH W F PVD + L L
Sbjct: 286 NKKSKLNGH-----------------LKYCDTILKEMLSKKHAAYAWPFYKPVDAEALEL 328
Query: 403 HDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLL 462
HDY II+ PMDL TVK +++ Y + FA D+RL F N YNP +V MA +L
Sbjct: 329 HDYHEIIKQPMDLSTVKKKMDSREYPDAQNFAADIRLMFSNCYKYNPPDHEVVAMARKLQ 388
Query: 463 KIFEDKWVVIESE 475
+FE K+ + E
Sbjct: 389 DVFEMKFAKMPDE 401
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 52/91 (57%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD L L DY +I++PMD+GT+K RL N+Y + E +D
Sbjct: 42 VVKTLWKHQFAWPFYTPVDAIKLNLPDYHKVIKNPMDMGTIKKRLENNYYWTAGECMQDF 101
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN D+ +MA+ L KIF K
Sbjct: 102 NTMFTNCYIYNKPTDDIVLMAQALEKIFLQK 132
>gi|262189359|gb|ACY30377.1| BRD2 [Salmo salar]
Length = 824
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 62/104 (59%), Gaps = 3/104 (2%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G S+ + C+ +L++L+ KH W F PVD LGLHDY II+ PMDL T+K ++
Sbjct: 376 GKLSQQLRYCNGILKELLSKKHAAYAWPFYKPVDASMLGLHDYHDIIKQPMDLSTIKRKM 435
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFE 466
+ Y+ ++FA DVR+ + N YNP DV MA +L +FE
Sbjct: 436 DSREYRDAQQFAGDVRIMYSNCYKYNPPDHDVVTMARKLQDVFE 479
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 54/99 (54%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
A+++ L +H W F+ PVD L L DY II+ PMD+GT+K RL N+Y+S E +D
Sbjct: 87 AMMKSLWRHHFAWPFHEPVDASKLSLPDYHKIIKQPMDMGTIKRRLENNYYRSASECMQD 146
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
F N YN D+ +MA+ L K F K + E
Sbjct: 147 FNTMFTNCYIYNKPTDDIVLMAQSLEKAFLQKVAQMPQE 185
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 47/75 (62%), Gaps = 4/75 (5%)
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWELDR 610
M+YDEK++LS ++ LP EKL +V II+ R SL D +EIE+D +++ TL EL+R
Sbjct: 670 MSYDEKRQLSLDINKLPGEKLGRVVHIIQAREPSLRDTDPEEIEIDFETLKPSTLRELER 729
Query: 611 FVTNYKKSLSKNKRK 625
+V L K RK
Sbjct: 730 YVMT---CLRKKPRK 741
>gi|167391721|ref|XP_001739904.1| bromodomain-containing protein [Entamoeba dispar SAW760]
gi|165896243|gb|EDR23718.1| bromodomain-containing protein, putative [Entamoeba dispar SAW760]
Length = 264
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 63/95 (66%)
Query: 375 CSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFA 434
C ++++LMK VF PVD + + +YF II+ PMDLGTV ++ KN Y S +F+
Sbjct: 68 CMNVMKQLMKVSESEVFMEPVDPEIWNIPNYFEIIKTPMDLGTVIKKIKKNMYYSIDQFS 127
Query: 435 EDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKW 469
DVRLTF NAMT+NP G VH AE+L KIFE+ +
Sbjct: 128 NDVRLTFTNAMTFNPPGNYVHSYAEKLYKIFENYY 162
>gi|148362124|gb|ABQ59651.1| BRD2 [Salmo salar]
gi|148362144|gb|ABQ59668.1| BRD2 [Salmo salar]
Length = 824
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 62/104 (59%), Gaps = 3/104 (2%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G S+ + C+ +L++L+ KH W F PVD LGLHDY II+ PMDL T+K ++
Sbjct: 376 GKLSQQLRYCNGILKELLSKKHAAYAWPFYKPVDASMLGLHDYHDIIKQPMDLSTIKRKM 435
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFE 466
+ Y+ ++FA DVR+ + N YNP DV MA +L +FE
Sbjct: 436 DSREYRDAQQFAGDVRIMYSNCYKYNPPDHDVVTMARKLQDVFE 479
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 54/99 (54%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
A+++ L +H W F+ PVD L L DY II+ PMD+GT+K RL N+Y+S E +D
Sbjct: 87 AMMKSLWRHHFAWPFHEPVDASKLSLPDYHKIIKQPMDMGTIKRRLENNYYRSASECMQD 146
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
F N YN D+ +MA+ L K F K + E
Sbjct: 147 FNTMFTNCYIYNKPTDDIVLMAQSLEKAFLQKVAQMPQE 185
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 47/75 (62%), Gaps = 4/75 (5%)
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWELDR 610
M+YDEK++LS ++ LP EKL +V II+ R SL D +EIE+D +++ TL EL+R
Sbjct: 670 MSYDEKRQLSLDINKLPGEKLGRVVHIIQAREPSLRDTDPEEIEIDFETLKPSTLRELER 729
Query: 611 FVTNYKKSLSKNKRK 625
+V L K RK
Sbjct: 730 YVMT---CLRKKPRK 741
>gi|410926019|ref|XP_003976476.1| PREDICTED: bromodomain-containing protein 3-like [Takifugu
rubripes]
Length = 820
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 59/98 (60%), Gaps = 3/98 (3%)
Query: 372 FKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
+ C+ +L++L+ KH W F PVD +LGLHDY II+ PMDL T+K +++ Y
Sbjct: 391 LRYCNGVLKELLSKKHAGYAWPFYKPVDASSLGLHDYHDIIKQPMDLSTIKRKMDNREYL 450
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFE 466
++FA DVRL F N YNP DV MA +L +FE
Sbjct: 451 DSQQFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFE 488
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 51/92 (55%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
LL+ L +H W F+ PVD L L DY II+ PMD+GT+K RL N+Y+S E +D
Sbjct: 87 VLLKSLWRHHFAWPFHEPVDAVKLNLPDYHKIIKTPMDMGTIKKRLENNYYRSASECMQD 146
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN D+ +MA+ L K F K
Sbjct: 147 FNTMFTNCYIYNKPTDDIVLMAQSLEKAFLQK 178
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 47/75 (62%), Gaps = 4/75 (5%)
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQ-HDDEIEVDIDSVDAETLWELDR 610
M+YDEK++LS ++ LP EKL +V II+ R SL + +EIE+D +++ TL EL+R
Sbjct: 663 MSYDEKRQLSLDINKLPGEKLGRVVYIIQSREPSLRDTNPEEIEIDFETLKPSTLRELER 722
Query: 611 FVTNYKKSLSKNKRK 625
+V L K RK
Sbjct: 723 YVMT---CLRKKPRK 734
>gi|379642603|ref|NP_001243832.1| bromodomain containing 3 [Xenopus (Silurana) tropicalis]
Length = 795
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 62/107 (57%), Gaps = 3/107 (2%)
Query: 372 FKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
K C ++L++++ KH W F PVD + L LHDY II+HPMDL +VK +++ Y
Sbjct: 364 LKYCDSILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSSVKRKMDAREYA 423
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
+ FA D+RL F N YNP +V MA +L +FE ++ + E
Sbjct: 424 DAQAFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE 470
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 52/91 (57%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD L L DY II++PMD+GT+K RL N+Y S E +D
Sbjct: 42 VVKTLWKHQFAWPFYQPVDCVKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSANECMQDF 101
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN D+ +MA+ L KIF K
Sbjct: 102 NTMFTNCYIYNKSTDDIVLMAQALEKIFLQK 132
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 54/85 (63%), Gaps = 4/85 (4%)
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWELDR 610
MTYDEK++LS ++ LP EKL +V II+ R SL + DEIE+D +++ TL EL+R
Sbjct: 642 MTYDEKRQLSLDINRLPGEKLGRVVHIIQSREPSLRDSNPDEIEIDFETLKPTTLRELER 701
Query: 611 FVTNYKKSLSKNKRKAELANQARAV 635
+V K L K +RK + + +AV
Sbjct: 702 YV---KSCLQKKQRKPFSSGKKQAV 723
>gi|290985307|ref|XP_002675367.1| bromodomain-containing protein [Naegleria gruberi]
gi|284088963|gb|EFC42623.1| bromodomain-containing protein [Naegleria gruberi]
Length = 718
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 43/96 (44%), Positives = 62/96 (64%), Gaps = 4/96 (4%)
Query: 379 LEKLM----KHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFA 434
L+KLM KHK W FN PVD L + DYF +I++PMDLGTV+ ++N N Y +F
Sbjct: 187 LQKLMGIVKKHKWSWPFNNPVDPVQLQIPDYFDVIKNPMDLGTVEKKVNNNEYMDVYQFL 246
Query: 435 EDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWV 470
+DVR+ + N YNP D++ MA+++ K F +K+V
Sbjct: 247 DDVRVIWSNCYLYNPVDSDIYKMAKEVEKYFNEKYV 282
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 49/76 (64%), Gaps = 6/76 (7%)
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEI--EVDIDSVDAETLWELD 609
M+Y++K++LSTN+ SL +KL +V+II+ + S E E+D+D +D TL+EL+
Sbjct: 386 MSYNQKKELSTNIGSLEGDKLAEVVRIIQSKAPSA-SSKSETEIEIDLDKLDDATLFELE 444
Query: 610 RFVTNYKKSLSKNKRK 625
FV +K+L K K K
Sbjct: 445 AFV---EKNLPKEKNK 457
>gi|395759239|pdb|2LSP|B Chain B, Solution Structures Of Brd4 Second Bromodomain With
Nf-Kb-K310ac Peptide
Length = 128
Score = 96.7 bits (239), Expect = 4e-17, Method: Composition-based stats.
Identities = 47/110 (42%), Positives = 66/110 (60%), Gaps = 3/110 (2%)
Query: 369 SKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN 425
S+ K CS +L+++ KH W F PVDV+ LGLHDY II+HPMD+ T+K++L
Sbjct: 19 SEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAR 78
Query: 426 WYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
Y+ +EF DVRL F N YNP +V MA +L +FE ++ + E
Sbjct: 79 EYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE 128
>gi|348505480|ref|XP_003440289.1| PREDICTED: bromodomain-containing protein 3-like [Oreochromis
niloticus]
Length = 513
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 79/136 (58%), Gaps = 4/136 (2%)
Query: 344 ESNKKSKLNGKKQAGNELAHGFGTGSKIFKSCSALLEKLMKHKH---GWVFNAPVDVKNL 400
ES+ ++K + ++++ + G ++ K C+ +L++++ KH W F PVD + L
Sbjct: 163 ESSSRAKSDFEEESSQQNTEPCGLSEQL-KYCNHILKEMLSKKHSAYAWPFYKPVDAEAL 221
Query: 401 GLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQ 460
LHDY II++PMDL TVK +++ Y+ + FA DVRL F N YNP DV I A +
Sbjct: 222 QLHDYHDIIKYPMDLSTVKKKMDAGEYQDAQAFAADVRLIFSNCYKYNPAHHDVVIKARK 281
Query: 461 LLKIFEDKWVVIESEY 476
L IFE ++ + E+
Sbjct: 282 LQGIFEQRFAKMPDEH 297
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 50/91 (54%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L +H+ W F PVD LGL DY II PMD+GT+K RL N+Y S E +D
Sbjct: 40 VIKSLWRHQFAWPFYQPVDAVALGLPDYHKIITSPMDMGTIKKRLENNYYWSASECLQDF 99
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN D+ +MA L KI+ K
Sbjct: 100 NTMFTNCYIYNKPTDDIVLMALALEKIYLQK 130
>gi|148725667|emb|CAN87975.1| novel protein (zgc:77289) [Danio rerio]
Length = 729
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 51/133 (38%), Positives = 67/133 (50%), Gaps = 20/133 (15%)
Query: 346 NKKSKLNGKKQAGNELAHGFGTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGL 402
NKKSKLN K C +L++++ KH W F PVD + L L
Sbjct: 286 NKKSKLNDH-----------------LKYCDTILKEMLSKKHAAYAWPFYKPVDAEALEL 328
Query: 403 HDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLL 462
HDY II+ PMDL TVK +++ Y + FA DVRL F N YNP +V MA +L
Sbjct: 329 HDYHEIIKQPMDLSTVKKKMDSREYPDAQNFAADVRLMFSNCYKYNPPDHEVVAMARKLQ 388
Query: 463 KIFEDKWVVIESE 475
+FE K+ + E
Sbjct: 389 DVFEMKFAKMPDE 401
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 52/91 (57%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD L L DY +I++PMD+GT+K RL N+Y + E +D
Sbjct: 42 VVKTLWKHQFAWPFYTPVDAIKLNLPDYHKVIKNPMDMGTIKKRLENNYYWTAGECMQDF 101
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN D+ +MA+ L KIF K
Sbjct: 102 NTMFTNCYIYNKPTDDIVLMAQALEKIFLQK 132
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 49/75 (65%), Gaps = 4/75 (5%)
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWELDR 610
M+YDEK++LS ++ LP EKL +V II+ R SL + DEIE+D +++ TL EL+R
Sbjct: 575 MSYDEKRQLSLDINRLPGEKLGRVVHIIQSREPSLRDSNPDEIEIDFETLKPSTLRELER 634
Query: 611 FVTNYKKSLSKNKRK 625
+V K L K +RK
Sbjct: 635 YV---KSCLQKKQRK 646
>gi|148725668|emb|CAN87976.1| novel protein (zgc:77289) [Danio rerio]
Length = 664
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 51/133 (38%), Positives = 67/133 (50%), Gaps = 20/133 (15%)
Query: 346 NKKSKLNGKKQAGNELAHGFGTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGL 402
NKKSKLN K C +L++++ KH W F PVD + L L
Sbjct: 286 NKKSKLNDH-----------------LKYCDTILKEMLSKKHAAYAWPFYKPVDAEALEL 328
Query: 403 HDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLL 462
HDY II+ PMDL TVK +++ Y + FA DVRL F N YNP +V MA +L
Sbjct: 329 HDYHEIIKQPMDLSTVKKKMDSREYPDAQNFAADVRLMFSNCYKYNPPDHEVVAMARKLQ 388
Query: 463 KIFEDKWVVIESE 475
+FE K+ + E
Sbjct: 389 DVFEMKFAKMPDE 401
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 52/91 (57%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD L L DY +I++PMD+GT+K RL N+Y + E +D
Sbjct: 42 VVKTLWKHQFAWPFYTPVDAIKLNLPDYHKVIKNPMDMGTIKKRLENNYYWTAGECMQDF 101
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN D+ +MA+ L KIF K
Sbjct: 102 NTMFTNCYIYNKPTDDIVLMAQALEKIFLQK 132
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 49/75 (65%), Gaps = 4/75 (5%)
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWELDR 610
M+YDEK++LS ++ LP EKL +V II+ R SL + DEIE+D +++ TL EL+R
Sbjct: 552 MSYDEKRQLSLDINRLPGEKLGRVVHIIQSREPSLRDSNPDEIEIDFETLKPSTLRELER 611
Query: 611 FVTNYKKSLSKNKRK 625
+V K L K +RK
Sbjct: 612 YV---KSCLQKKQRK 623
>gi|195167198|ref|XP_002024421.1| GL14811 [Drosophila persimilis]
gi|194107794|gb|EDW29837.1| GL14811 [Drosophila persimilis]
Length = 678
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 60/105 (57%), Gaps = 3/105 (2%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ + KH W F PVD K L L DY II+ PMD+GT+K RL N+Y S KE D
Sbjct: 46 VMKMIWKHHFAWPFQQPVDAKKLNLPDYHKIIKQPMDMGTIKKRLENNYYWSAKETIHDF 105
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRI 482
F+N YN G+DV +MA+ L K+F K IE+ E+ +
Sbjct: 106 NTMFNNCYVYNKPGEDVVVMAQTLEKVFLQK---IETMPKEELEL 147
>gi|134105429|pdb|2OUO|A Chain A, Crystal Structure Of The Bromo Domain 2 In Human
Bromodomain Containing Protein 4 (Brd4)
gi|340707485|pdb|2YEM|A Chain A, Crystal Structure Of The Second Bromodomain Of Human Brd4
With The Inhibitor Gw841819x
gi|340707486|pdb|2YEM|B Chain B, Crystal Structure Of The Second Bromodomain Of Human Brd4
With The Inhibitor Gw841819x
Length = 130
Score = 96.3 bits (238), Expect = 5e-17, Method: Composition-based stats.
Identities = 47/110 (42%), Positives = 66/110 (60%), Gaps = 3/110 (2%)
Query: 369 SKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN 425
S+ K CS +L+++ KH W F PVDV+ LGLHDY II+HPMD+ T+K++L
Sbjct: 21 SEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAR 80
Query: 426 WYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
Y+ +EF DVRL F N YNP +V MA +L +FE ++ + E
Sbjct: 81 EYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE 130
>gi|384493798|gb|EIE84289.1| hypothetical protein RO3G_08999 [Rhizopus delemar RA 99-880]
Length = 569
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Query: 372 FKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
K C+ L++L K K+ + F PVDV L + DY I++HPMDL T++ +LN Y
Sbjct: 234 MKFCAQALKELKKTKYRDINYPFLHPVDVVGLNIPDYVDIVKHPMDLSTIEKKLNDGEYA 293
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKW 469
P++F D+RL F+N YNP VH M QL K F+DKW
Sbjct: 294 EPEDFENDIRLMFNNCYLYNPPSLPVHKMGRQLEKAFDDKW 334
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 50/95 (52%)
Query: 372 FKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPK 431
K C A++ L KH+ F PVD L + DY IIRHPMDL TV +LN Y S
Sbjct: 58 IKYCGAIMRNLKKHRDAAPFLQPVDYVKLNIPDYPKIIRHPMDLATVDKKLNSGQYDSVD 117
Query: 432 EFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFE 466
++ DVRL F+N +N V ++ + + FE
Sbjct: 118 QWIYDVRLVFNNCFKFNGPEAMVSMLCQNVESAFE 152
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 52/84 (61%), Gaps = 4/84 (4%)
Query: 551 DMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSL-FQHDDEIEVDIDSVDAETLWELD 609
+ T+D+K+ LS + +L ++L+ +V II+ +L Q +EI +DIDS+D TL L
Sbjct: 441 EFTFDQKKDLSERINNLTGDRLNTVVDIIRSSMPNLDGQGQEEIVLDIDSLDRSTLHRLH 500
Query: 610 RFVTNYKKSLSKNKRKAELANQAR 633
FVT +SL K+K K+ LA + R
Sbjct: 501 EFVTG--ESLLKHK-KSPLAKKQR 521
>gi|194763657|ref|XP_001963949.1| GF20989 [Drosophila ananassae]
gi|190618874|gb|EDV34398.1| GF20989 [Drosophila ananassae]
Length = 907
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 55/91 (60%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ + KH W F PVD K L L DY II+HPMD+GT+K RL N+Y S KE D
Sbjct: 46 VMKVIWKHHFSWPFQQPVDAKKLNLPDYHKIIKHPMDMGTIKKRLENNYYWSAKEAIHDF 105
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F+N YN G+DV +MA+ L K+F K
Sbjct: 106 NTMFNNCYVYNKPGEDVVVMAQTLEKVFLQK 136
>gi|47086635|ref|NP_997867.1| bromodomain-containing protein 3 [Danio rerio]
gi|41944567|gb|AAH65949.1| Bromodomain containing 3b [Danio rerio]
Length = 664
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 67/133 (50%), Gaps = 20/133 (15%)
Query: 346 NKKSKLNGKKQAGNELAHGFGTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGL 402
NKKSKLN K C +L++++ KH W F PVD + L L
Sbjct: 286 NKKSKLNDH-----------------LKYCDTILKEMLSKKHAAYAWPFYKPVDAEALEL 328
Query: 403 HDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLL 462
HDY II+ PMDL TVK +++ Y + FA D+RL F N YNP +V MA +L
Sbjct: 329 HDYHEIIKQPMDLSTVKKKMDSREYPDAQNFAADIRLMFSNCYKYNPPDHEVVAMARKLQ 388
Query: 463 KIFEDKWVVIESE 475
+FE K+ + E
Sbjct: 389 DVFEMKFAKMPDE 401
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 52/91 (57%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD L L DY +I++PMD+GT+K RL N+Y + E +D
Sbjct: 42 VVKTLWKHQFAWPFYTPVDAIKLNLPDYHKVIKNPMDMGTIKKRLENNYYWTAGECMQDF 101
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN D+ +MA+ L KIF K
Sbjct: 102 NTMFTNCYIYNKPTDDIVLMAQALEKIFLQK 132
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 49/75 (65%), Gaps = 4/75 (5%)
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWELDR 610
M+YDEK++LS ++ LP EKL +V II+ R SL + DEIE+D +++ TL EL+R
Sbjct: 552 MSYDEKRQLSLDINRLPGEKLGRVVHIIQSREPSLRDSNPDEIEIDFETLKPSTLRELER 611
Query: 611 FVTNYKKSLSKNKRK 625
+V K L K +RK
Sbjct: 612 YV---KSCLQKKQRK 623
>gi|47216871|emb|CAG11678.1| unnamed protein product [Tetraodon nigroviridis]
Length = 834
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 59/98 (60%), Gaps = 3/98 (3%)
Query: 372 FKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
+ C+ +L++L+ KH W F PVD +LGLHDY II+ PMDL T+K +++ Y
Sbjct: 405 LRYCNGVLKELLSKKHAGYAWPFYKPVDASSLGLHDYHDIIKQPMDLSTIKRKMDNREYL 464
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFE 466
++FA DVRL F N YNP DV MA +L +FE
Sbjct: 465 DSQQFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFE 502
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 51/92 (55%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
LL+ L +H W F+ PVD L L DY II+ PMD+GT+K RL N+Y+S E +D
Sbjct: 58 VLLKSLWRHHFAWPFHEPVDAVKLNLPDYHKIIKTPMDMGTIKKRLENNYYRSASECMQD 117
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN D+ +MA+ L K F K
Sbjct: 118 FNTMFTNCYIYNKPTDDIVLMAQSLEKAFLQK 149
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 47/75 (62%), Gaps = 4/75 (5%)
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQ-HDDEIEVDIDSVDAETLWELDR 610
M+YDEK++LS ++ LP EKL +V II+ R SL + +EIE+D +++ TL EL+R
Sbjct: 677 MSYDEKRQLSLDINKLPGEKLGRVVYIIQSREPSLRDTNPEEIEIDFETLKPSTLRELER 736
Query: 611 FVTNYKKSLSKNKRK 625
+V L K RK
Sbjct: 737 YVMT---CLRKKPRK 748
>gi|241955217|ref|XP_002420329.1| bromodomain-containing transcription factor, putative; protein
involved in transcription initiation at TATA-containing
promoters, putative [Candida dubliniensis CD36]
gi|223643671|emb|CAX41404.1| bromodomain-containing transcription factor, putative [Candida
dubliniensis CD36]
Length = 721
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 65/101 (64%), Gaps = 3/101 (2%)
Query: 372 FKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
+ C+ +++LM KH + F APVD L + +Y I++HPMDLGT++++L N Y+
Sbjct: 376 LRFCNQTIKELMSKKHYNYNFPFLAPVDTVALNIPNYNEIVKHPMDLGTIQSKLANNEYE 435
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKW 469
+ +F +DVRL F N +NP+G DV++M +L +F+ KW
Sbjct: 436 NADDFEKDVRLVFKNCYLFNPEGTDVNMMGHRLEAVFDKKW 476
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 49/105 (46%), Gaps = 3/105 (2%)
Query: 379 LEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVR 438
++ + +++ F PVD L + Y+ I PMDL T++ ++N Y++ + +D
Sbjct: 207 IKAVKRNREAVPFLHPVDTVKLNVPFYYNYIPRPMDLSTIERKINLKAYENVSQVVDDFN 266
Query: 439 LTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIG 483
L N +N + + MA + FE V + +E+ +G
Sbjct: 267 LMVKNCKKFNGEAAGISKMAMNIQAQFEKLMVKVPP---KELPVG 308
>gi|412993064|emb|CCO16597.1| bromodomain containing 2 [Bathycoccus prasinos]
Length = 1076
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 64/100 (64%), Gaps = 1/100 (1%)
Query: 371 IFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL-NKNWYKS 429
+ + C A + ++M H G F PVD LGL +Y TII +PMDLGT+K + + Y+
Sbjct: 503 VHRQCLAAVRQVMSHDWGGPFRMPVDAVALGLANYHTIITNPMDLGTIKKFIEDGGKYEL 562
Query: 430 PKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKW 469
KE EDV LTF+NAM +N +G DVH+MA+ LL ++ K+
Sbjct: 563 AKEVHEDVELTFNNAMKFNAEGTDVHVMAKTLLALWHTKY 602
>gi|378734234|gb|EHY60693.1| bromodomain-containing protein [Exophiala dermatitidis NIH/UT8656]
Length = 968
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 60/102 (58%), Gaps = 5/102 (4%)
Query: 372 FKSCSALLEKLMKHKHGW----VFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWY 427
K C +L++L K+ W F PVD L + YF II+ PMDLGT++T+LN N Y
Sbjct: 609 LKFCDEVLKELTATKY-WPINQYFTHPVDPVALNIPTYFQIIKKPMDLGTIRTKLNNNVY 667
Query: 428 KSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKW 469
+ K+F EDVRL F N +NP+G V+ QL ++F KW
Sbjct: 668 EKAKDFEEDVRLVFKNCYKFNPEGDLVNSAGHQLEELFNKKW 709
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 50/104 (48%), Gaps = 11/104 (10%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
++ L K F PVD L + YF +I+HPMDLGT+ RL +N Y S F D
Sbjct: 412 VISNLKKSNASAAFRLPVDPVALNIPTYFEVIKHPMDLGTIDQRLKRNEYTSVAAFISDF 471
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMR 481
L N + +N G D H + + K ++S +N +MR
Sbjct: 472 ELIVDNCVKFN--GPD-HGVTQAARK--------MQSSFNSQMR 504
>gi|21594670|gb|AAH32124.1| BRD3 protein [Homo sapiens]
gi|119608520|gb|EAW88114.1| bromodomain containing 3, isoform CRA_b [Homo sapiens]
Length = 556
Score = 95.5 bits (236), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 78/154 (50%), Gaps = 19/154 (12%)
Query: 341 PPAESNKKSKLNGKKQAGN-------------ELAHGFGTGSKI---FKSCSALLEKLMK 384
PP K++K+ ++++G E+ G K+ + C ++L +++
Sbjct: 265 PPLSDPKQAKVVARRESGGRPIKPPKKDLEDGEVPQHAGKKGKLSEHLRYCDSILREMLS 324
Query: 385 HKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTF 441
KH W F PVD + L LHDY II+HPMDL TVK +++ Y + FA DVRL F
Sbjct: 325 KKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDGREYPDAQGFAADVRLMF 384
Query: 442 HNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
N YNP +V MA +L +FE ++ + E
Sbjct: 385 SNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE 418
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 52/91 (57%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD L L DY II++PMD+GT+K RL N+Y S E +D
Sbjct: 46 VVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDF 105
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN D+ +MA+ L KIF K
Sbjct: 106 NTMFTNCYIYNKPTDDIVLMAQALEKIFLQK 136
>gi|185134173|ref|NP_001117185.1| bromodomain containing 2 [Salmo salar]
gi|148362162|gb|ABQ59684.1| BRD2 [Salmo salar]
Length = 815
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 62/107 (57%), Gaps = 3/107 (2%)
Query: 372 FKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
+ C+ +L++L+ KH W F PVD LGLHDY II+ PMDL T+K +++ Y+
Sbjct: 378 LRYCNGILKELLSKKHAAYAWPFYKPVDASMLGLHDYHDIIKQPMDLSTIKRKMDSREYR 437
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
++FA DVR+ + N YNP DV MA +L +FE + + E
Sbjct: 438 DAQQFAGDVRIMYSNCYKYNPPDHDVVAMARKLQDVFEFCFAKMPDE 484
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 54/99 (54%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
A+++ L +H W F+ PVD L L DY II+ PMD+GT+K RL N+Y+S E +D
Sbjct: 87 AMMKYLWRHHFAWPFHEPVDASKLSLPDYHKIIKQPMDMGTIKRRLENNYYRSASECMQD 146
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
F N YN D+ +MA+ L K F K + E
Sbjct: 147 FNTMFTNCYIYNKPTDDIVLMAQSLEKAFLQKVAQMPQE 185
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 47/75 (62%), Gaps = 4/75 (5%)
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQ-HDDEIEVDIDSVDAETLWELDR 610
M+YDEK++LS ++ LP EKL +V II+ R SL + +EIE+D +++ TL EL+R
Sbjct: 661 MSYDEKRQLSLDINKLPGEKLGRVVHIIQAREPSLRDTNPEEIEIDFETLKPSTLRELER 720
Query: 611 FVTNYKKSLSKNKRK 625
+V L K RK
Sbjct: 721 YVMT---CLRKKPRK 732
>gi|146147391|gb|ABQ01994.1| bromodomain containing 2 [Salmo salar]
gi|148362147|gb|ABQ59670.1| BRD2 [Salmo salar]
Length = 815
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 62/107 (57%), Gaps = 3/107 (2%)
Query: 372 FKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
+ C+ +L++L+ KH W F PVD LGLHDY II+ PMDL T+K +++ Y+
Sbjct: 378 LRYCNGILKELLSKKHAAYAWPFYKPVDASMLGLHDYHDIIKQPMDLSTIKRKMDSREYR 437
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
++FA DVR+ + N YNP DV MA +L +FE + + E
Sbjct: 438 DAQQFAGDVRIMYSNCYKYNPPDHDVVAMARKLQDVFEFCFAKMPDE 484
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 54/99 (54%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
A+++ L +H W F+ PVD L L DY II+ PMD+GT+K RL N+Y+S E +D
Sbjct: 87 AMMKYLWRHHFAWPFHEPVDASKLSLPDYHKIIKQPMDMGTIKRRLENNYYRSASECMQD 146
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
F N YN D+ +MA+ L K F K + E
Sbjct: 147 FNTMFTNCYIYNKPTDDIVLMAQSLEKAFLQKVAQMPQE 185
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 47/75 (62%), Gaps = 4/75 (5%)
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQ-HDDEIEVDIDSVDAETLWELDR 610
M+YDEK++LS ++ LP EKL +V II+ R SL + +EIE+D +++ TL EL+R
Sbjct: 661 MSYDEKRQLSLDINKLPGEKLGRVVHIIQAREPSLRDTNPEEIEIDFETLKPSTLRELER 720
Query: 611 FVTNYKKSLSKNKRK 625
+V L K RK
Sbjct: 721 YVMT---CLRKKPRK 732
>gi|388581469|gb|EIM21777.1| Bromodomain-containing protein [Wallemia sebi CBS 633.66]
Length = 596
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 124/296 (41%), Gaps = 72/296 (24%)
Query: 362 AHGFGTGSKIFKSCSALLEKLMKHKHGWV---FNAPVDVKNLGLHDYFTIIRHPMDLGTV 418
A+G + + C+ +L++L K H F PVD LGL DY +++ PMDL TV
Sbjct: 242 AYGRNGTADQMRHCAYILKELHKKVHSSYASPFYDPVDYIALGLPDYPQVVQQPMDLSTV 301
Query: 419 KTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNR 478
+LN Y+ P +F D++L F N YNP G VH Q +F++KW +
Sbjct: 302 GQKLNLGDYEGPSDFFGDMKLMFGNCYKYNPPGTPVHEAGRQTEAVFDEKWTQL------ 355
Query: 479 EMRIGADYEMGFHTPTSRKAPPLPPPLDM-------------RRILDRSESITHPMDSRL 525
PPL PL++ R+I D +S+T +
Sbjct: 356 --------------------PPLSTPLEISDDENSDAVKALQRQIEDMQKSLTD-----I 390
Query: 526 KPISTTPSSRTPAPK-----------------KPKAKDPHKRDMTY-------DEKQKLS 561
K T R +P+ K + D Y D K++L+
Sbjct: 391 KKKGTGAPERVSTGGGGSGRGGKRGSTGGQVGRPRRKSYDEDDENYQIPEITFDMKKELA 450
Query: 562 TNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWELDRFVTNYKK 617
+Q L ++LD ++II + L + DEIE+DID + +TL +L FV +K
Sbjct: 451 GKIQQLEGDQLDKAIKIIYE-TLDLDNNSDEIELDIDVLPVKTLQKLYMFVVKPQK 505
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 56/125 (44%), Gaps = 10/125 (8%)
Query: 352 NGKKQAGNELAHGFGTGSKI----FKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFT 407
NG K A G G K S+L+++L K K F +PVD ++G+ Y
Sbjct: 61 NGTKLPPRSAAFGIPAGPPFSFNQLKFVSSLVKQLKKMKAAVPFLSPVDYISMGIPHYPE 120
Query: 408 IIRHPMDLGTVKTRLNK------NWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQL 461
+I P DLGTV ++ K Y + ++ DVR F N +N V M +Q+
Sbjct: 121 VISEPSDLGTVDRKVQKTIKAEEGGYYNFNDWETDVRRIFRNTEWFNGHEHPVSKMGKQV 180
Query: 462 LKIFE 466
+ F+
Sbjct: 181 EESFD 185
>gi|380792435|gb|AFE68093.1| bromodomain-containing protein 3, partial [Macaca mulatta]
Length = 508
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 78/154 (50%), Gaps = 19/154 (12%)
Query: 341 PPAESNKKSKLNGKKQAGN-------------ELAHGFGTGSKI---FKSCSALLEKLMK 384
PP K++K+ ++++G E+ G K+ + C ++L +++
Sbjct: 265 PPLSDPKQAKVVARRESGGRPIKPPKKDLEDGEVPQHAGKKGKLSEHLRYCDSILREMLS 324
Query: 385 HKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTF 441
KH W F PVD + L LHDY II+HPMDL TVK +++ Y + FA DVRL F
Sbjct: 325 KKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDGREYPDAQGFAADVRLMF 384
Query: 442 HNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
N YNP +V MA +L +FE ++ + E
Sbjct: 385 SNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE 418
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 52/91 (57%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD L L DY II++PMD+GT+K RL N+Y S E +D
Sbjct: 46 VVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDF 105
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN D+ +MA+ L KIF K
Sbjct: 106 NTMFTNCYIYNKPTDDIVLMAQALEKIFLQK 136
>gi|116283313|gb|AAH04832.1| Brd3 protein [Mus musculus]
Length = 501
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 78/154 (50%), Gaps = 19/154 (12%)
Query: 341 PPAESNKKSKLNGKKQAGN-------------ELAHGFGTGSKI---FKSCSALLEKLMK 384
PP K++K+ ++++G E+ G K+ + C ++L +++
Sbjct: 264 PPLSEPKQAKVVARRESGGRPIKPPKKDLEDGEVPQHAGKKGKLSEHLRHCDSILREMLS 323
Query: 385 HKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTF 441
KH W F PVD + L LHDY II+HPMDL TVK +++ Y + FA D+RL F
Sbjct: 324 KKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDSREYPDAQGFAADIRLMF 383
Query: 442 HNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
N YNP +V MA +L +FE ++ + E
Sbjct: 384 SNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE 417
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 52/91 (57%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD L L DY II++PMD+GT+K RL N+Y S E +D
Sbjct: 45 VVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDF 104
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN D+ +MA+ L KIF K
Sbjct: 105 NTMFTNCYIYNKPTDDIVLMAQALEKIFLQK 135
>gi|260943750|ref|XP_002616173.1| hypothetical protein CLUG_03414 [Clavispora lusitaniae ATCC 42720]
gi|238849822|gb|EEQ39286.1| hypothetical protein CLUG_03414 [Clavispora lusitaniae ATCC 42720]
Length = 613
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 65/101 (64%), Gaps = 3/101 (2%)
Query: 372 FKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
+ C+ ++++LM K + F PVD L + +YF I++ PMDLG+++T+L N Y+
Sbjct: 284 LRFCNQVIKELMSKKFYSINFPFLQPVDPVALNIPNYFDIVKEPMDLGSIQTKLANNQYE 343
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKW 469
+ EF +DVRL F N +NP+G DVH M ++L ++F+ KW
Sbjct: 344 NGDEFEKDVRLVFKNCYLFNPEGNDVHSMGQRLEQVFDKKW 384
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 43/82 (52%)
Query: 391 FNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPK 450
F PVDV L + Y+ I+ PMDL T++ +LN N Y+ P + +D L N + +N +
Sbjct: 139 FLHPVDVVKLNVPLYYNYIKRPMDLSTIERKLNLNAYEDPSQVVDDFNLMVSNCLRFNGE 198
Query: 451 GQDVHIMAEQLLKIFEDKWVVI 472
+ MA+ + FE + I
Sbjct: 199 NSGISRMAKNIQAQFEKHMLNI 220
>gi|224057449|ref|XP_002190567.1| PREDICTED: bromodomain testis-specific protein [Taeniopygia
guttata]
Length = 680
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 53/92 (57%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
++ + +H W F+ PVD L L DY+TII+ PMDLGT+K RL N+Y E ED
Sbjct: 38 VVMRAMWRHNFSWPFHQPVDAAALNLPDYYTIIKKPMDLGTIKKRLEHNYYTKAAECIED 97
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
+ F N YN G D+ MAE+L K+F K
Sbjct: 98 FKTMFWNCYMYNKSGDDIVFMAEELEKVFMQK 129
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 54/107 (50%), Gaps = 3/107 (2%)
Query: 372 FKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
K C+A+L++L KH W F P DV + I ++P DLGT+K +++ Y
Sbjct: 285 LKHCNAILKELFSKKHAAYAWPFIKPEDVASASTGANQAIAKYPTDLGTIKKKMDNFEYN 344
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
+EFA DVRL F + N ++ MA +L +FE + I E
Sbjct: 345 DIQEFATDVRLMFMSCYKRNSSDHEIVAMARKLQDVFEMHFAKIPDE 391
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 50/77 (64%), Gaps = 4/77 (5%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWEL 608
+ M YDEK++LS ++ LP +KL +V II+ R ++ + DEIE+D ++++A TL EL
Sbjct: 521 KPMNYDEKRQLSLDINKLPGDKLGKVVHIIQSREPAMRNSNPDEIEIDFETLNASTLREL 580
Query: 609 DRFVTNYKKSLSKNKRK 625
+R+V L K +RK
Sbjct: 581 ERYVAT---CLRKKQRK 594
>gi|26332152|dbj|BAC29806.1| unnamed protein product [Mus musculus]
Length = 511
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 78/154 (50%), Gaps = 19/154 (12%)
Query: 341 PPAESNKKSKLNGKKQAGN-------------ELAHGFGTGSKI---FKSCSALLEKLMK 384
PP K++K+ ++++G E+ G K+ + C ++L +++
Sbjct: 264 PPLSEPKQAKVVARRESGGRPIKPPKKDLEDGEVPQHAGKKGKLSEHLRHCDSILREMLS 323
Query: 385 HKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTF 441
KH W F PVD + L LHDY II+HPMDL TVK +++ Y + FA D+RL F
Sbjct: 324 KKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDSREYPDAQGFAADIRLMF 383
Query: 442 HNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
N YNP +V MA +L +FE ++ + E
Sbjct: 384 SNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE 417
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 52/91 (57%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD L L DY II++PMD+GT+K RL N+Y S E +D
Sbjct: 45 VVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDF 104
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN D+ +MA+ L KIF K
Sbjct: 105 NTMFTNCYIYNKPTDDIVLMAQALEKIFLQK 135
>gi|255732041|ref|XP_002550944.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240131230|gb|EER30790.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 730
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 64/101 (63%), Gaps = 3/101 (2%)
Query: 372 FKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
+ C+ +++LM KH + F APVD L + +Y I++ PMDLGT++T+L N Y+
Sbjct: 377 LRFCNQTIKELMSKKHYNYNFPFLAPVDTVALNIPNYREIVKEPMDLGTIQTKLTNNEYE 436
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKW 469
+ +F +DVRL F N +NP+G DV++M +L +F+ KW
Sbjct: 437 NGDQFEKDVRLVFKNCYAFNPEGTDVNMMGHRLEAVFDKKW 477
Score = 47.0 bits (110), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 49/107 (45%), Gaps = 3/107 (2%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ + +++ F PVD L + Y+ I PMDL T++ ++N Y+ + +D
Sbjct: 216 VIKVIKRNREAVPFLHPVDTVKLNIPFYYNYIPRPMDLSTIERKINLKAYEDVSQIIDDF 275
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGA 484
L N +N + + MA + FE V + +E+ +G
Sbjct: 276 NLMVKNCKKFNGEAAGISKMASNIQAQFEKHMVKVPP---KELPVGV 319
>gi|312373442|gb|EFR21185.1| hypothetical protein AND_17423 [Anopheles darlingi]
Length = 401
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 55/91 (60%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ + KH+ W F PVD K L L DY II+ PMDLGT+K RL N+Y S KE +D
Sbjct: 76 VMKAVWKHQFSWPFQQPVDAKKLNLPDYHKIIKQPMDLGTIKKRLENNYYWSAKECIKDF 135
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN G+DV +MA+ L K+F K
Sbjct: 136 NTMFTNCYVYNKPGEDVVVMAQTLEKLFLTK 166
>gi|50285717|ref|XP_445287.1| hypothetical protein [Candida glabrata CBS 138]
gi|49524591|emb|CAG58193.1| unnamed protein product [Candida glabrata]
Length = 643
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 125/264 (47%), Gaps = 27/264 (10%)
Query: 370 KIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNW 426
+ K C ++ +LM K+ + F PVD L YF ++ PMDLGTV +L+ NW
Sbjct: 285 RAMKFCQGVVRELMSKKYASFNYPFLEPVDPVALNCPTYFDYVKEPMDLGTVSKKLS-NW 343
Query: 427 -YKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWV-----------VIES 474
Y++ + D+RL F N +NP G V++M +L IF KW ES
Sbjct: 344 EYENLDQAEHDIRLIFQNCYAFNPDGTIVNMMGHRLEDIFNTKWADRPLYSDVESEEAES 403
Query: 475 EYNREMRIGADYEMGFHTPTSRKAPPLPPPLDMRRI----LDRSESITHPMDSRLKPIST 530
Y+ E +D E+ + T+ L L+ ++ L + E + RL
Sbjct: 404 AYDDEESDESDVEIDETSITNPAIQYLEDQLERMKVELQQLKKQELEKIRKERRLARGPK 463
Query: 531 TPSSR------TPAPKKPKAKDPHKRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNS 584
R + K + K K +TYD K+ ++ N+ LP+ KL+ +++IIKK
Sbjct: 464 KTRGRRGRKKGSTKAKTGRGKKKLKSVVTYDMKKIITENINDLPTAKLEKVIEIIKKSMP 523
Query: 585 SLFQHDDEIEVDIDSVDAETLWEL 608
++ D+E+E+D+D++D T+ L
Sbjct: 524 NI-GDDEEVELDLDTLDNNTILTL 546
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 39/76 (51%)
Query: 391 FNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPK 450
F PVD L + YF I+ PMDL T++ +LN N Y++P++ ED L N+ +N
Sbjct: 132 FLQPVDPVALNIPLYFNFIKRPMDLQTIERKLNANAYETPEQITEDFNLMVENSAKFNGP 191
Query: 451 GQDVHIMAEQLLKIFE 466
+ M + FE
Sbjct: 192 TAVITQMGRNIQAAFE 207
>gi|26345416|dbj|BAC36359.1| unnamed protein product [Mus musculus]
Length = 505
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 78/154 (50%), Gaps = 19/154 (12%)
Query: 341 PPAESNKKSKLNGKKQAGN-------------ELAHGFGTGSKI---FKSCSALLEKLMK 384
PP K++K+ ++++G E+ G K+ + C ++L +++
Sbjct: 264 PPLSEPKQAKVVARRESGGRPIKPPKKDLEDGEVPQHAGKKGKLSEHLRHCDSILREMLS 323
Query: 385 HKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTF 441
KH W F PVD + L LHDY II+HPMDL TVK +++ Y + FA D+RL F
Sbjct: 324 KKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDSREYPDAQGFAADIRLMF 383
Query: 442 HNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
N YNP +V MA +L +FE ++ + E
Sbjct: 384 SNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE 417
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 52/91 (57%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD L L DY II++PMD+GT+K RL N+Y S E +D
Sbjct: 45 VVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDF 104
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN D+ +MA+ L KIF K
Sbjct: 105 NTMFTNCYIYNKPTDDIVLMAQALEKIFLQK 135
>gi|393911119|gb|EJD76176.1| bromodomain containing protein [Loa loa]
Length = 1163
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 62/115 (53%), Gaps = 4/115 (3%)
Query: 359 NELAHGF-GTGSKIFKSCSALLEKLMKHK---HGWVFNAPVDVKNLGLHDYFTIIRHPMD 414
N+L F G ++ K C L+ +L K W F PVDV+ L L DY+ I+++PMD
Sbjct: 346 NQLKPRFKGKQTEQMKFCQRLVNELFTKKCKSFTWPFLEPVDVEGLKLEDYYDIVKNPMD 405
Query: 415 LGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKW 469
LGT++ +L+ Y +P+E DV L N YNP +H L K FEDKW
Sbjct: 406 LGTIRRKLDAKQYATPEELRADVILVCENCYKYNPTSDPIHQHGRALQKYFEDKW 460
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+L+ M+HKH W F PVD LGL DY +I+ PMD+ T++ RL +Y S K+ +D
Sbjct: 122 VLKPAMRHKHAWPFMKPVDAVRLGLPDYHKVIKRPMDMNTIEKRLRNCYYYSAKDCMQDF 181
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEMGFHTPTSRK 497
F N +N DV +M + +E+ Y +M++ E+ PT+++
Sbjct: 182 ESIFSNCYKFNQNEDDVSLMCKN-----------VENLYREKMKLLPPQEVEIPRPTAKR 230
Query: 498 A 498
A
Sbjct: 231 A 231
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 46/74 (62%), Gaps = 3/74 (4%)
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWELDRF 611
M+YDEK++LS ++ LP +KL ++V II+ R + +EIE+D +++ A TL EL+ F
Sbjct: 769 MSYDEKRQLSLDINKLPGDKLSSVVSIIESREQLPGFNPEEIEIDFETLKATTLRELEAF 828
Query: 612 VTNYKKSLSKNKRK 625
V L K RK
Sbjct: 829 VA---ACLKKKPRK 839
>gi|429242322|ref|NP_593620.3| bromodomain protein (predicted) [Schizosaccharomyces pombe 972h-]
gi|391358177|sp|Q9HGP4.3|YK82_SCHPO RecName: Full=Bromodomain-containing protein C631.02
gi|347834104|emb|CAC05484.3| bromodomain protein (predicted) [Schizosaccharomyces pombe]
Length = 727
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 70/126 (55%), Gaps = 9/126 (7%)
Query: 372 FKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
K C ++L++L+K +H + F PV+ G DYF +I+HPMDLGT++ +LN N Y
Sbjct: 394 MKFCQSVLKELLKKQHEAYAYPFYKPVNPTACGCPDYFKVIKHPMDLGTMQNKLNHNEYA 453
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIG----- 483
S K F D+ L F N +N G VH+M ++L IF+ W + +++ E +G
Sbjct: 454 SMKAFEADMVLMFKNCYKFNSAGTPVHLMGKKLESIFQKLWAN-KPDFDSETYMGMSSVN 512
Query: 484 ADYEMG 489
DY G
Sbjct: 513 TDYYYG 518
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 54/104 (51%)
Query: 373 KSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKE 432
K A+L +L + + F APVD + DY TII++P+DLGT++ + + Y S +
Sbjct: 236 KYIHAMLRQLRRGRDSIPFRAPVDPVKQNIPDYPTIIKNPIDLGTMQKKFSSGVYSSAQH 295
Query: 433 FAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEY 476
F +D+ L F N YN V +M + L FE + + S Y
Sbjct: 296 FIDDMNLMFSNCFLYNGTESPVGVMGKNLQATFERQLKQLPSAY 339
>gi|292614925|ref|XP_002662470.1| PREDICTED: bromodomain-containing protein 2 [Danio rerio]
Length = 979
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 65/119 (54%), Gaps = 6/119 (5%)
Query: 363 HGFGTGSKI---FKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLG 416
H G +K+ K C+A+L+++ KH W F PVD + LGL DY II PMD+
Sbjct: 261 HQVGRRTKLSERLKYCNAILKEMFSKKHSAYAWPFYKPVDAETLGLLDYHEIIHQPMDMS 320
Query: 417 TVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
T+K ++ Y +FA D+RL F N YNP G +V MA +L +FE ++ I E
Sbjct: 321 TIKKKMEAREYTDALQFAADMRLMFSNCYKYNPPGHEVVSMARKLQDVFEFRFSKIPDE 379
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 56/101 (55%), Gaps = 1/101 (0%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
++ L KH W F PVD L L DY+TII++PMDL T++ RL N+Y E ED
Sbjct: 40 VVIRALWKHHFSWPFRQPVDAVRLNLPDYYTIIKNPMDLTTIRKRLENNYYWKAMECVED 99
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVI-ESEY 476
F N YN G D+ +MA+ L K+F +K + E EY
Sbjct: 100 FNTMFTNCYVYNRPGDDIVLMAQVLEKLFLEKVAEMPEEEY 140
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWELDR 610
M+Y+EK++LS ++ LP +KL +V IIK R L D +EIE+D +++ TL L+
Sbjct: 515 MSYEEKRQLSLDINKLPGDKLGKVVNIIKAREPLLRDTDPEEIEIDFETLKPSTLRALEC 574
Query: 611 FVT 613
+V
Sbjct: 575 YVV 577
>gi|340721599|ref|XP_003399205.1| PREDICTED: bromodomain-containing protein 2-like [Bombus
terrestris]
Length = 388
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 54/91 (59%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+L+ + KH+ W F PVD K L L DY II+ PMDLGT+K RL +Y S KE +D
Sbjct: 78 VLKPVWKHQFAWPFQQPVDAKKLNLPDYHKIIKQPMDLGTIKKRLENTYYWSGKECIQDF 137
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN G+DV +MA+ L K+F K
Sbjct: 138 NTMFTNCYVYNKPGEDVVVMAQALEKLFLTK 168
>gi|89267975|emb|CAJ81450.1| bromodomain, testis-specific [Xenopus (Silurana) tropicalis]
Length = 438
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 62/107 (57%), Gaps = 3/107 (2%)
Query: 372 FKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
K C ++L++++ KH W F PVD + L LHDY II+HPMDL +VK +++ Y
Sbjct: 321 LKYCDSILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSSVKRKMDAREYA 380
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
+ FA D+RL F N YNP +V MA +L +FE ++ + E
Sbjct: 381 DAQAFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE 427
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 49/87 (56%)
Query: 382 LMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTF 441
L KH+ W F PVD L L DY II++PMD+GT+K RL N+Y S E +D F
Sbjct: 3 LWKHQFAWPFYQPVDCVKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSANECMQDFNTMF 62
Query: 442 HNAMTYNPKGQDVHIMAEQLLKIFEDK 468
N YN D+ +MA+ L KIF K
Sbjct: 63 TNCYIYNKSTDDIVLMAQALEKIFLQK 89
>gi|312085274|ref|XP_003144613.1| hypothetical protein LOAG_09036 [Loa loa]
Length = 1022
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 62/115 (53%), Gaps = 4/115 (3%)
Query: 359 NELAHGF-GTGSKIFKSCSALLEKLMKHK---HGWVFNAPVDVKNLGLHDYFTIIRHPMD 414
N+L F G ++ K C L+ +L K W F PVDV+ L L DY+ I+++PMD
Sbjct: 205 NQLKPRFKGKQTEQMKFCQRLVNELFTKKCKSFTWPFLEPVDVEGLKLEDYYDIVKNPMD 264
Query: 415 LGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKW 469
LGT++ +L+ Y +P+E DV L N YNP +H L K FEDKW
Sbjct: 265 LGTIRRKLDAKQYATPEELRADVILVCENCYKYNPTSDPIHQHGRALQKYFEDKW 319
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 46/74 (62%), Gaps = 3/74 (4%)
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWELDRF 611
M+YDEK++LS ++ LP +KL ++V II+ R + +EIE+D +++ A TL EL+ F
Sbjct: 628 MSYDEKRQLSLDINKLPGDKLSSVVSIIESREQLPGFNPEEIEIDFETLKATTLRELEAF 687
Query: 612 VTNYKKSLSKNKRK 625
V L K RK
Sbjct: 688 VA---ACLKKKPRK 698
>gi|156230233|gb|AAI51887.1| Brd3b protein [Danio rerio]
Length = 500
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/133 (38%), Positives = 67/133 (50%), Gaps = 20/133 (15%)
Query: 346 NKKSKLNGKKQAGNELAHGFGTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGL 402
NKKSKLN K C +L++++ KH W F PVD + L L
Sbjct: 286 NKKSKLNDH-----------------LKYCDTILKEMLSKKHAAYAWPFYKPVDAEALEL 328
Query: 403 HDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLL 462
HDY II+ PMDL TVK +++ Y + FA DVRL F N YNP +V MA +L
Sbjct: 329 HDYHEIIKQPMDLSTVKKKMDSREYPDAQNFAADVRLMFSNCYKYNPPDHEVVAMARKLQ 388
Query: 463 KIFEDKWVVIESE 475
+FE K+ + E
Sbjct: 389 DVFEMKFAKMPDE 401
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 52/91 (57%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD L L DY +I++PMD+GT+K RL N+Y + E +D
Sbjct: 42 VVKTLWKHQFAWPFYTPVDAIKLNLPDYHKVIKNPMDMGTIKKRLENNYYWTAGECMQDF 101
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN D+ +MA+ L KIF K
Sbjct: 102 NTMFTNCYIYNKPTDDIVLMAQALEKIFLQK 132
>gi|80971731|gb|ABB52829.1| BRD2 [Oncorhynchus mykiss]
Length = 812
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 64/110 (58%), Gaps = 3/110 (2%)
Query: 369 SKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN 425
S+ + C+++L+ L+ KH W F PVD LGLHDY II+ PMDL +K R++
Sbjct: 348 SQQLRYCNSVLKDLLSKKHAAYAWPFYKPVDASALGLHDYHDIIKCPMDLSNIKRRMDSR 407
Query: 426 WYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
Y+ ++F+ DVRL F N YNP DV MA +L +FE ++ + E
Sbjct: 408 EYRDSQQFSADVRLMFSNCYKYNPPDHDVVGMARKLQDVFEFRFAKMPDE 457
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 55/99 (55%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
A+++ L +H W F+ PVD L L DY II+ PMD+GT+K RL N+Y+S E +D
Sbjct: 59 AMIKSLWRHHFAWPFHEPVDAFRLNLPDYHKIIKQPMDMGTIKKRLENNYYRSASECMQD 118
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
F N YN D+ +MA+ L K+F K + E
Sbjct: 119 FNTMFTNCYIYNKPTDDIVLMAQSLEKVFLQKVAQMPQE 157
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 47/75 (62%), Gaps = 4/75 (5%)
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQ-HDDEIEVDIDSVDAETLWELDR 610
M+YDEK++LS ++ LP EKL +V II+ R SL + +EIE+D +++ TL EL+R
Sbjct: 655 MSYDEKRQLSLDINKLPGEKLGRVVHIIQSREPSLRDTNPEEIEIDFETLKPSTLRELER 714
Query: 611 FVTNYKKSLSKNKRK 625
+V L K RK
Sbjct: 715 YVMT---CLRKKPRK 726
>gi|170582857|ref|XP_001896320.1| Bromodomain containing protein [Brugia malayi]
gi|158596511|gb|EDP34844.1| Bromodomain containing protein [Brugia malayi]
Length = 1009
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 62/115 (53%), Gaps = 4/115 (3%)
Query: 359 NELAHGF-GTGSKIFKSCSALLEKLMKHK---HGWVFNAPVDVKNLGLHDYFTIIRHPMD 414
N+L F G ++ K C L+ +L K W F PVDV+ L L DY+ I+++PMD
Sbjct: 204 NQLKPRFKGKQTEQMKFCQRLVNELFTKKCKSFTWPFLEPVDVEGLKLEDYYDIVKNPMD 263
Query: 415 LGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKW 469
LGT++ +L+ Y +P+E DV L N YNP +H L K FEDKW
Sbjct: 264 LGTIRRKLDAKQYATPEELRADVILICENCYKYNPTSDPIHQHGRALQKYFEDKW 318
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 46/74 (62%), Gaps = 3/74 (4%)
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWELDRF 611
M+YDEK++LS ++ LP +KL ++V II+ R + +EIE+D +++ A TL EL+ F
Sbjct: 621 MSYDEKRQLSLDINKLPGDKLSSVVSIIESREQLPGFNPEEIEIDFETLKATTLRELEAF 680
Query: 612 VTNYKKSLSKNKRK 625
V L K RK
Sbjct: 681 VA---ACLKKKPRK 691
>gi|1749522|dbj|BAA13819.1| unnamed protein product [Schizosaccharomyces pombe]
Length = 361
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 126/252 (50%), Gaps = 17/252 (6%)
Query: 373 KSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKS 429
K C ++L++L+K +H + F PV+ G DYF +I+HPMDLGT++ +LN N Y S
Sbjct: 43 KFCQSVLKELLKKQHEAYAYPFYKPVNPTACGCPDYFKVIKHPMDLGTMQNKLNHNEYAS 102
Query: 430 PKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGA----- 484
K F D+ L F N +N G VH+M ++L IF+ W + +++ E +G
Sbjct: 103 MKAFEADMVLMFKNCYKFNSAGTPVHLMGKKLESIFQKLWAN-KPDFDSETYMGMSSVNT 161
Query: 485 DYEMGFHTPTSRKAPPLPPPLDMRRILDRSESITHPMDSRLKPISTTPSSRTPAPKKPKA 544
DY G + L + ++R H + S L+ + + S + + +
Sbjct: 162 DYYYGDNEVFDSGDEFLEDDGEEFEAVNRQ---IHKLQSTLQAMKSRARSSSVSRRSRSR 218
Query: 545 K---DPHKRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVD 601
D + +TY+ + +L+ L +++L ++ +I++ L ++ DEIE+D+ ++
Sbjct: 219 SLSVDIYP-PITYEMQNELAEQCNYLSADQLSHVAEILRAALPHL-RNTDEIEIDVSAMP 276
Query: 602 AETLWELDRFVT 613
+ +++ +V
Sbjct: 277 PDVFYKVYYYVC 288
>gi|148676421|gb|EDL08368.1| bromodomain containing 3, isoform CRA_c [Mus musculus]
Length = 516
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 78/154 (50%), Gaps = 19/154 (12%)
Query: 341 PPAESNKKSKLNGKKQAGN-------------ELAHGFGTGSKI---FKSCSALLEKLMK 384
PP K++K+ ++++G E+ G K+ + C ++L +++
Sbjct: 269 PPLSEPKQAKVVARRESGGRPIKPPKKDLEDGEVPQHAGKKGKLSEHLRHCDSILREMLS 328
Query: 385 HKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTF 441
KH W F PVD + L LHDY II+HPMDL TVK +++ Y + FA D+RL F
Sbjct: 329 KKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDSREYPDAQGFAADIRLMF 388
Query: 442 HNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
N YNP +V MA +L +FE ++ + E
Sbjct: 389 SNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE 422
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 52/91 (57%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD L L DY II++PMD+GT+K RL N+Y S E +D
Sbjct: 50 VVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDF 109
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN D+ +MA+ L KIF K
Sbjct: 110 NTMFTNCYIYNKPTDDIVLMAQALEKIFLQK 140
>gi|308800642|ref|XP_003075102.1| Vesicle trafficking protein Sly1 (Sec1 family) (ISS) [Ostreococcus
tauri]
gi|116061656|emb|CAL52374.1| Vesicle trafficking protein Sly1 (Sec1 family) (ISS) [Ostreococcus
tauri]
Length = 1086
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 63/104 (60%), Gaps = 1/104 (0%)
Query: 371 IFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL-NKNWYKS 429
+ K C + +L+ HK G+ F APVD L L Y II+ PMDLGTVK + N Y
Sbjct: 134 VHKQCLTSVRQLIAHKWGFPFAAPVDPDALDLPTYREIIKEPMDLGTVKNLIENGGKYVK 193
Query: 430 PKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIE 473
+E DVRLTF NAM +N +G DVH MA++LL +E +W I+
Sbjct: 194 AEEVDADVRLTFANAMKFNAEGTDVHAMAKELLVEWETRWATIQ 237
>gi|432855679|ref|XP_004068304.1| PREDICTED: bromodomain testis-specific protein-like [Oryzias
latipes]
Length = 969
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 62/107 (57%), Gaps = 3/107 (2%)
Query: 372 FKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
+ C+ +L++++ +H W F PVD LGL DY II+ PMDL T+K +++ Y
Sbjct: 259 LRDCNNILKEMLSKRHCAYAWPFYTPVDAIALGLQDYHDIIKQPMDLSTIKKKMDHQEYT 318
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
+ EFA DVRL F N YNP V MA +L ++FE +++ + E
Sbjct: 319 NATEFAADVRLMFSNCYRYNPPSHGVVYMARKLQEVFEARYMKMSQE 365
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 53/92 (57%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
+++ L +H++ W F PVD L + DY+ +I+HPMDLGTV RL +Y E +D
Sbjct: 39 VVIKALWRHQYSWPFRQPVDAVALCIPDYYKLIKHPMDLGTVMQRLKNRYYWEANECIKD 98
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
+ F+N YN G D+ MA+ L KIF K
Sbjct: 99 ISTMFNNCYVYNRPGDDIVFMAQTLEKIFLQK 130
Score = 47.0 bits (110), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWEL 608
+ +TY EK++L +++ LP +KL ++ IIK R S L + + +++ +D D V TL L
Sbjct: 497 KPVTYQEKKQLKSDINMLPGDKLGELLNIIKSRESYLQESNLEDVVIDFDMVKPSTLTVL 556
Query: 609 DRFVTNYKKSLSKN 622
RFV K K+
Sbjct: 557 QRFVAECLKKRGKS 570
>gi|426023907|sp|F1QW93.2|BRDT_DANRE RecName: Full=Bromodomain testis-specific protein
Length = 918
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 65/119 (54%), Gaps = 6/119 (5%)
Query: 363 HGFGTGSKI---FKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLG 416
H G +K+ K C+A+L+++ KH W F PVD + LGL DY II PMD+
Sbjct: 261 HQVGRRTKLSERLKYCNAILKEMFSKKHSAYAWPFYKPVDAETLGLLDYHEIIHQPMDMS 320
Query: 417 TVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
T+K ++ Y +FA D+RL F N YNP G +V MA +L +FE ++ I E
Sbjct: 321 TIKKKMEAREYTDALQFAADMRLMFSNCYKYNPPGHEVVSMARKLQDVFEFRFSKIPDE 379
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 56/101 (55%), Gaps = 1/101 (0%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
++ L KH W F PVD L L DY+TII++PMDL T++ RL N+Y E ED
Sbjct: 40 VVIRALWKHHFSWPFRQPVDAVRLNLPDYYTIIKNPMDLTTIRKRLENNYYWKAMECVED 99
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVI-ESEY 476
F N YN G D+ +MA+ L K+F +K + E EY
Sbjct: 100 FNTMFTNCYVYNRPGDDIVLMAQVLEKLFLEKVAEMPEEEY 140
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWELDR 610
M+Y+EK++LS ++ LP +KL +V IIK R L D +EIE+D +++ TL L+
Sbjct: 506 MSYEEKRQLSLDINKLPGDKLGKVVNIIKAREPLLRDTDPEEIEIDFETLKPSTLRALEC 565
Query: 611 FVT 613
+V
Sbjct: 566 YVV 568
>gi|33416361|gb|AAH55533.1| Brd3b protein [Danio rerio]
Length = 499
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 67/133 (50%), Gaps = 20/133 (15%)
Query: 346 NKKSKLNGKKQAGNELAHGFGTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGL 402
NKKSKLN K C +L++++ KH W F PVD + L L
Sbjct: 286 NKKSKLNDH-----------------LKYCDTILKEMLSKKHAAYAWPFYKPVDAEALEL 328
Query: 403 HDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLL 462
HDY II+ PMDL TVK +++ Y + FA D+RL F N YNP +V MA +L
Sbjct: 329 HDYHEIIKQPMDLSTVKKKMDSREYPDAQNFAADIRLMFSNCYKYNPPDHEVVAMARKLQ 388
Query: 463 KIFEDKWVVIESE 475
+FE K+ + E
Sbjct: 389 DVFEMKFAKMPDE 401
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 52/91 (57%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD L L DY +I++PMD+GT+K RL N+Y + E +D
Sbjct: 42 VVKTLWKHQFAWPFYTPVDAIKLNLPDYHKVIKNPMDMGTIKKRLENNYYWTAGECMQDF 101
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN D+ +MA+ L KIF K
Sbjct: 102 NTMFTNCYIYNKPTDDIVLMAQALEKIFLQK 132
>gi|299472993|emb|CBN77394.1| Zinc finger, TAZ-type [Ectocarpus siliculosus]
Length = 1359
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/115 (45%), Positives = 68/115 (59%), Gaps = 7/115 (6%)
Query: 370 KIFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNK---NW 426
+I + A+L KL + GWVFN PVD +L L DYF II HPMDLGTV +L K
Sbjct: 414 RIQAAAGAVLTKLRDSQFGWVFNDPVDPVHLNLPDYFEIITHPMDLGTVARKLAKEGAGG 473
Query: 427 YKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVV----IESEYN 477
Y +EFA DV+L F NAM YN +V+ +AE++ K F W + +E+E N
Sbjct: 474 YLEHEEFAADVQLVFDNAMKYNGPESEVYPVAERMKKEFNKDWALALKRMEAEEN 528
>gi|68478269|ref|XP_716876.1| hypothetical protein CaO19.8593 [Candida albicans SC5314]
gi|68478390|ref|XP_716816.1| hypothetical protein CaO19.978 [Candida albicans SC5314]
gi|46438500|gb|EAK97830.1| hypothetical protein CaO19.978 [Candida albicans SC5314]
gi|46438562|gb|EAK97891.1| hypothetical protein CaO19.8593 [Candida albicans SC5314]
Length = 732
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 64/101 (63%), Gaps = 3/101 (2%)
Query: 372 FKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
+ C+ +++LM KH + F APVD L + +Y I++ PMDLGT++++L N Y+
Sbjct: 389 LRFCNQTIKELMSKKHYNYNFPFLAPVDTVALNIPNYNEIVKQPMDLGTIQSKLANNEYE 448
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKW 469
+ +F +DVRL F N +NP+G DV++M +L +F+ KW
Sbjct: 449 NADDFEKDVRLVFKNCYLFNPEGTDVNMMGHRLEAVFDKKW 489
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 43/94 (45%)
Query: 379 LEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVR 438
++ + +++ F PVD L + Y+ I PMDL T++ ++N Y+ + +D
Sbjct: 222 IKAVKRNREAVPFLHPVDTVKLNVPFYYNYIPRPMDLSTIERKINLKAYEDVSQVVDDFN 281
Query: 439 LTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVI 472
L N +N + + MA + FE V +
Sbjct: 282 LMVKNCKKFNGEAAGISKMATNIQAQFEKLMVKV 315
>gi|259090114|pdb|2WP1|A Chain A, Structure Of Brdt Bromodomain 2 Bound To An Acetylated
Histone H3 Peptide
gi|259090115|pdb|2WP1|B Chain B, Structure Of Brdt Bromodomain 2 Bound To An Acetylated
Histone H3 Peptide
Length = 126
Score = 94.0 bits (232), Expect = 3e-16, Method: Composition-based stats.
Identities = 45/107 (42%), Positives = 63/107 (58%), Gaps = 3/107 (2%)
Query: 372 FKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
K CS +L++++ KH W F PVD LGLH+Y+ ++++PMDLGT+K +++ YK
Sbjct: 16 LKHCSEILKEMLAKKHLPYAWPFYNPVDADALGLHNYYDVVKNPMDLGTIKGKMDNQEYK 75
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
EFA DVRL F N YNP +V MA L +FE + I E
Sbjct: 76 DAYEFAADVRLMFMNCYKYNPPDHEVVAMARTLQDVFELHFAKIPDE 122
>gi|170587322|ref|XP_001898426.1| Bromodomain containing protein [Brugia malayi]
gi|158594150|gb|EDP32738.1| Bromodomain containing protein [Brugia malayi]
Length = 960
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 62/115 (53%), Gaps = 4/115 (3%)
Query: 359 NELAHGF-GTGSKIFKSCSALLEKLMKHK---HGWVFNAPVDVKNLGLHDYFTIIRHPMD 414
N+L F G ++ K C L+ +L K W F PVDV+ L L DY+ I+++PMD
Sbjct: 388 NQLKPRFKGKQTEQMKFCQRLVNELFTKKCKSFTWPFLEPVDVEGLKLEDYYDIVKNPMD 447
Query: 415 LGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKW 469
LGT++ +L+ Y +P+E DV L N YNP +H L K FEDKW
Sbjct: 448 LGTIRRKLDAKQYATPEELRADVILVCENCYKYNPTSDPIHQHGRALQKYFEDKW 502
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 58/141 (41%), Gaps = 43/141 (30%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPK------ 431
+L+ M+HKH W F PVD LGL DY +I+ PMD+ T++ RL +Y S K
Sbjct: 122 VLKPAMRHKHAWPFMKPVDAVRLGLPDYHKVIKRPMDMNTIEKRLRNCYYYSAKDCMQVS 181
Query: 432 ----------------------------------EF---AEDVRLTFHNAMTYNPKGQDV 454
EF ++DV F+N TYNP V
Sbjct: 182 RPLFFELETECIWTFTERATSTGIYASDCVMTYFEFFNSSDDVMTMFNNCYTYNPPEYGV 241
Query: 455 HIMAEQLLKIFEDKWVVIESE 475
++MA+ L + K + E
Sbjct: 242 YMMAKNLEQYILSKLAAMPPE 262
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 46/74 (62%), Gaps = 3/74 (4%)
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWELDRF 611
M+YDEK++LS ++ LP +KL ++V II+ R + +EIE+D +++ A TL EL+ F
Sbjct: 811 MSYDEKRQLSLDINKLPGDKLSSVVSIIESREQLPGFNPEEIEIDFETLKATTLRELEAF 870
Query: 612 VTNYKKSLSKNKRK 625
V L K RK
Sbjct: 871 VA---ACLKKKPRK 881
>gi|432888948|ref|XP_004075102.1| PREDICTED: bromodomain-containing protein 3-like [Oryzias latipes]
Length = 460
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/110 (41%), Positives = 66/110 (60%), Gaps = 3/110 (2%)
Query: 369 SKIFKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN 425
S+ K CS +L++++ KH W F PVD + LGLHDY II++PMDL TVK +++
Sbjct: 227 SEQLKYCSDILKEMLSKKHSMYAWPFYKPVDAEALGLHDYHDIIKYPMDLSTVKKKMDAG 286
Query: 426 WYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
Y+ ++F+ DVRL F N YNP V MA +L +FE K+ + E
Sbjct: 287 DYQDAEQFSADVRLIFSNCYKYNPPQHSVVGMARKLQGVFEQKFAKMPEE 336
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 50/92 (54%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
+++ L +H W F PVD LGL DY II PMD+GT+K RL N+Y S E ED
Sbjct: 84 VVIKSLWRHPFAWPFYQPVDAVALGLPDYHKIITSPMDMGTIKKRLENNYYWSASECMED 143
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN D+ +MA L KIF +K
Sbjct: 144 FNTMFTNCYIYNKPTDDIVLMALPLEKIFLNK 175
>gi|444519215|gb|ELV12653.1| Guanine nucleotide exchange factor VAV2 [Tupaia chinensis]
Length = 1580
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 65/113 (57%), Gaps = 3/113 (2%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G S+ + C ++L++++ KH W F PVD + L LHDY II+HPMDL TVK ++
Sbjct: 259 GKLSEHLRYCDSILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKM 318
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
+ Y + FA D+RL F N YNP +V MA +L +FE ++ + E
Sbjct: 319 DSREYPDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE 371
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 49/75 (65%), Gaps = 4/75 (5%)
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWELDR 610
M+YDEK++LS ++ LP EKL +V II+ R SL + DEIE+D +++ TL EL+R
Sbjct: 525 MSYDEKRQLSLDINRLPGEKLGRVVHIIQSREPSLRDSNPDEIEIDFETLKPTTLRELER 584
Query: 611 FVTNYKKSLSKNKRK 625
+V K L K +RK
Sbjct: 585 YV---KSCLQKKQRK 596
>gi|341892468|gb|EGT48403.1| hypothetical protein CAEBREN_29751 [Caenorhabditis brenneri]
Length = 283
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 52/80 (65%)
Query: 394 PVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQD 453
PVD + LGLHDY II+ P+DL T++T+++ YK P +FA D+RL +N YNP G
Sbjct: 3 PVDAEKLGLHDYHKIIKEPIDLKTIRTKMDTGVYKEPADFAHDIRLMLNNCFLYNPVGDP 62
Query: 454 VHIMAEQLLKIFEDKWVVIE 473
VHI + ++FE +W +E
Sbjct: 63 VHIFGMKFKEVFEKRWAELE 82
>gi|238882433|gb|EEQ46071.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 709
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 64/101 (63%), Gaps = 3/101 (2%)
Query: 372 FKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
+ C+ +++LM KH + F APVD L + +Y I++ PMDLGT++++L N Y+
Sbjct: 366 LRFCNQTIKELMSKKHYNYNFPFLAPVDTVALNIPNYNEIVKQPMDLGTIQSKLANNEYE 425
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKW 469
+ +F +DVRL F N +NP+G DV++M +L +F+ KW
Sbjct: 426 NADDFEKDVRLVFKNCYLFNPEGTDVNMMGHRLEAVFDKKW 466
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 43/94 (45%)
Query: 379 LEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVR 438
++ + +++ F PVD L + Y+ I PMDL T++ ++N Y+ + +D
Sbjct: 199 IKAVKRNREAVPFLHPVDTVKLNVPFYYNYIPRPMDLSTIERKINLKAYEDVSQVVDDFN 258
Query: 439 LTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVI 472
L N +N + + MA + FE V +
Sbjct: 259 LMVKNCKKFNGEAAGISKMATNIQAQFEKLMVKV 292
>gi|384501114|gb|EIE91605.1| hypothetical protein RO3G_16316 [Rhizopus delemar RA 99-880]
Length = 227
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 119/245 (48%), Gaps = 51/245 (20%)
Query: 373 KSCSALLEKLMKHKH-GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPK 431
+SC +L L KH + F PVD L + DY +I++HP+DL T++T+LN+N Y SP
Sbjct: 2 RSCFQILNHLKAQKHLSFPFLYPVDPVALNIPDYPSIVKHPIDLSTIETKLNQNAYDSPH 61
Query: 432 EFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEMGFH 491
FA D++L F+N YN ++ +A++L E+ ++R+ I A
Sbjct: 62 AFAADIKLMFNNCYLYNAPELPIYDVAKEL-----------EAIFDRQWEIKA------- 103
Query: 492 TPTSRKAPPLPPPLDMRRILDRSESITHPMDSRLKPISTTPSSRTPAPKKPKAKDPHK-- 549
K P P ++KP S+ PA ++ K
Sbjct: 104 -----KQPASVP-------------------RQIKP------SKRPAVERKMKSRKKKKR 133
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWELD 609
++Y+EK++LS + L ++L+ ++QII+ L + + EI +DID++D TL L+
Sbjct: 134 ESLSYEEKKELSERINRLTGDRLNEVIQIIQSSLPDLDKGETEIVLDIDALDINTLKRLN 193
Query: 610 RFVTN 614
FV N
Sbjct: 194 DFVHN 198
>gi|195429272|ref|XP_002062687.1| GK19581 [Drosophila willistoni]
gi|194158772|gb|EDW73673.1| GK19581 [Drosophila willistoni]
Length = 293
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/96 (45%), Positives = 57/96 (59%), Gaps = 3/96 (3%)
Query: 374 SCSALLEKLM---KHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSP 430
+C LL+ LM K W+F PVD + LGL DY I++ PMD GT+K RL+ + YK
Sbjct: 18 ACKVLLKNLMSPTYKKLAWIFYEPVDPQTLGLDDYLEIVKEPMDFGTIKQRLDADDYKDA 77
Query: 431 KEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFE 466
EFA+DVRL F NA Y + MA++L IFE
Sbjct: 78 MEFAKDVRLIFFNAYLYTNSDHVCYKMAKELQLIFE 113
>gi|66800045|ref|XP_628948.1| ankyrin repeat-containing protein [Dictyostelium discoideum AX4]
gi|74896738|sp|Q54BA2.1|Y3800_DICDI RecName: Full=Ankyrin repeat, bromo and BTB domain-containing
protein DDB_G0293800
gi|60462310|gb|EAL60533.1| ankyrin repeat-containing protein [Dictyostelium discoideum AX4]
Length = 806
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/96 (44%), Positives = 58/96 (60%)
Query: 375 CSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFA 434
C L+ + K K F PVD G+ DYF +I+HPMDLGT+K +L+ N Y + K+FA
Sbjct: 525 CKGLINGMFKKKTSLAFQRPVDPLAEGIPDYFDVIKHPMDLGTIKGKLDNNGYSTIKDFA 584
Query: 435 EDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWV 470
DVRL F NA+TYN V A+ LL F+ K++
Sbjct: 585 ADVRLMFENALTYNADSSPVWKHAKTLLNAFDQKFL 620
>gi|150866686|ref|XP_001386360.2| hypothetical protein PICST_73625 [Scheffersomyces stipitis CBS
6054]
gi|149387942|gb|ABN68331.2| transcription factor [Scheffersomyces stipitis CBS 6054]
Length = 636
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 64/101 (63%), Gaps = 3/101 (2%)
Query: 372 FKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
+ CS +++LM KH + F APVD L + +YF +++ PMDLGT++++L N Y+
Sbjct: 305 LRFCSQTVKELMSKKHNGYNFPFVAPVDPVALNIPNYFKVVKEPMDLGTIQSKLTNNQYE 364
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKW 469
+ EF D+RL F N +NP+G +V++M +L +F+ +W
Sbjct: 365 NGDEFERDIRLVFKNCYIFNPEGSEVNMMGHRLEAVFDKRW 405
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 39/76 (51%)
Query: 391 FNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPK 450
F PVD+ L + Y+ I PMDL T++T+++ N Y+ + ED L N +N +
Sbjct: 154 FLHPVDIVKLNIPFYYNYIPRPMDLSTIETKVHVNAYEDSNQIVEDFNLMVANCKKFNGE 213
Query: 451 GQDVHIMAEQLLKIFE 466
+ MA+ + FE
Sbjct: 214 NAGISKMADNIQAHFE 229
>gi|303285596|ref|XP_003062088.1| bromodomain-containing protein [Micromonas pusilla CCMP1545]
gi|226456499|gb|EEH53800.1| bromodomain-containing protein [Micromonas pusilla CCMP1545]
Length = 476
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 95/194 (48%), Gaps = 18/194 (9%)
Query: 371 IFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNW-YKS 429
+ K C A ++++M HK + F PVD LGL +Y I++ PMDLGTV+ + K Y +
Sbjct: 64 VSKQCLASVKQVMSHKWSFPFVKPVDAAALGLENYHDIVKQPMDLGTVRANIEKGGVYAA 123
Query: 430 PKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIE---SEYNREMRIGAD- 485
+E DV LTF NAM YN DVH+MA L + +E +W VI+ +E + M +
Sbjct: 124 CEEVNRDVELTFANAMLYNGAQTDVHVMAATLKQFWEPRWAVIQEKVAEVDESMTAEKES 183
Query: 486 -----YEMGFHTPTS---RKAPPLPPPLD-MRRILD----RSESITHPMDSRLKPISTTP 532
EM + + L LD ++R L+ S IT PMD R K
Sbjct: 184 AEKKSAEMHARQTLAAEEMRCAGLMADLDQLKRSLEDLKRTSVRITRPMDEREKKRLANT 243
Query: 533 SSRTPAPKKPKAKD 546
+ P + +A+D
Sbjct: 244 MMKLPRRYREEARD 257
>gi|348688807|gb|EGZ28621.1| hypothetical protein PHYSODRAFT_537316 [Phytophthora sojae]
Length = 218
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 62/96 (64%)
Query: 373 KSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKE 432
K C+ ++E K + F V+ + GL+DY +++ PMDLGT++++L KN YK P E
Sbjct: 7 KKCTDVVEHFFKLESCEPFRERVNWEEWGLYDYLQVVKEPMDLGTIRSKLGKNEYKKPAE 66
Query: 433 FAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
FA D+RL + N YN G D++++A++L K FED+
Sbjct: 67 FARDMRLVWDNCKLYNQDGSDLYLLADELAKKFEDR 102
>gi|50413693|ref|XP_457302.1| DEHA2B07964p [Debaryomyces hansenii CBS767]
gi|49652967|emb|CAG85306.1| DEHA2B07964p [Debaryomyces hansenii CBS767]
Length = 639
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 64/102 (62%), Gaps = 3/102 (2%)
Query: 372 FKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
+ C+ +++L+ KH + F APVD L + +Y +++ PMDLGT++T+L N Y+
Sbjct: 314 LRFCNQTVKELISKKHYNYNFPFLAPVDTVALNIPNYAEVVKEPMDLGTIQTKLANNQYE 373
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWV 470
+ EF DVRL F N +NP+G DV++M +L IF+ KWV
Sbjct: 374 NGDEFERDVRLVFKNCYAFNPEGTDVNMMGHRLESIFDKKWV 415
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 38/76 (50%)
Query: 391 FNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPK 450
F PVD+ L + Y+ I PMDL T++ ++N N Y+ P ED L N +N +
Sbjct: 169 FVHPVDIVKLNIPFYYNYIPRPMDLSTIERKINANAYEEPSRIVEDFNLMVANCCKFNGE 228
Query: 451 GQDVHIMAEQLLKIFE 466
+ MA+ + FE
Sbjct: 229 QSGISKMAKNVQAHFE 244
>gi|148235897|ref|NP_001090595.1| bromodomain containing 3 [Xenopus laevis]
gi|120537384|gb|AAI29055.1| LOC100036838 protein [Xenopus laevis]
Length = 783
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 63/107 (58%), Gaps = 3/107 (2%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G S+ K C ++L++++ KH W F PVD + L LHDY II++PMDL +VK ++
Sbjct: 347 GRLSEHLKYCDSILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKNPMDLSSVKRKM 406
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKW 469
+ Y + FA D+RL F N YNP +V MA +L +FE ++
Sbjct: 407 DGREYADAQAFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRF 453
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 52/91 (57%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD L L DY II++PMD+GT+K RL N+Y S E +D
Sbjct: 42 VVKTLWKHQFAWPFYQPVDCVKLSLPDYHKIIKNPMDMGTIKKRLESNYYWSANECMQDF 101
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN D+ +MA+ L KIF K
Sbjct: 102 NTMFTNCYIYNKSTDDIVLMAQALEKIFLQK 132
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 49/75 (65%), Gaps = 4/75 (5%)
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWELDR 610
MTYDEK++LS ++ LP EKL +V II+ R SL + DEIE+D +++ TL EL+R
Sbjct: 629 MTYDEKRQLSLDINRLPGEKLGRVVHIIQSREPSLRDSNPDEIEIDFETLKPTTLRELER 688
Query: 611 FVTNYKKSLSKNKRK 625
+V K L K +RK
Sbjct: 689 YV---KSCLQKKQRK 700
>gi|426201896|gb|EKV51819.1| hypothetical protein AGABI2DRAFT_60502 [Agaricus bisporus var.
bisporus H97]
Length = 1353
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 126/263 (47%), Gaps = 21/263 (7%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHGWV---FNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
GT ++ K C +L L + +H V F PVD + L Y +++ PMDL T++ +L
Sbjct: 1015 GTAEQL-KYCGKILSDLNRKQHYNVASPFYEPVDWVKMDLPMYPKVVKKPMDLSTMRRKL 1073
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRI 482
+ N Y + K+F D +L N T+NP G V I L ++FE+KW + RE+
Sbjct: 1074 DNNEYAAAKDFYSDFKLMIKNCFTFNPVGTPVQIAGADLQRLFEEKWKSLPPL--REISD 1131
Query: 483 GADYEMGFHTPTSRKAPPLPPPLDMRR-----ILDRSESITHPMDSRLKPISTTPSSRTP 537
D E R+ + ++M + + + P+++T S+ P
Sbjct: 1132 SEDEEDSEDDDRQRQIADIEQKMEMLQNTLTSLKSKPAKKKKEERREKAPVAST--SKAP 1189
Query: 538 A------PKKPKAKDPHKRD--MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQH 589
+ P K K K P D +T+++K+ LS ++ L KL+ ++QII + +
Sbjct: 1190 SKQPKSQPSKKKNKKPIADDDVLTFEQKKDLSESIGKLDGTKLEKVIQIIHEGVPEIRDS 1249
Query: 590 DDEIEVDIDSVDAETLWELDRFV 612
+EIE++ID++ A L +L FV
Sbjct: 1250 TEEIELEIDTLPAAVLTKLYNFV 1272
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 53/107 (49%), Gaps = 12/107 (11%)
Query: 372 FKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN------ 425
+ C + + L K K F PVD L + YF+II+ PMDL TV+ +L +
Sbjct: 808 LRFCQSTVRSLKKIKDAAPFLRPVDPVALNIPHYFSIIKQPMDLSTVERKLASSNPQKPD 867
Query: 426 ------WYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFE 466
Y + EF DVRL F+N +T+N V M +++ +IF+
Sbjct: 868 PNPENPRYNNADEFVSDVRLMFYNCLTFNGPDHAVTAMGKRVEEIFD 914
>gi|349580096|dbj|GAA25257.1| K7_Bdf1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 686
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 61/102 (59%), Gaps = 3/102 (2%)
Query: 372 FKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
K C ++L++LM KH + F PVD ++ L YF ++ PMDLGT+ +LN Y+
Sbjct: 318 MKFCQSVLKELMAKKHASYNYPFLEPVDPVSMNLPTYFDYVKEPMDLGTIAKKLNDWQYQ 377
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWV 470
+ ++F DVRL F N T+NP G V++M +L ++F KW
Sbjct: 378 TMEDFGRDVRLVFKNCYTFNPDGTIVNMMGHRLEEVFNSKWA 419
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 40/76 (52%)
Query: 391 FNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPK 450
F PVD L + YF I+ PMDL T++ +LN Y+ P++ ED L +N++ +N
Sbjct: 173 FLQPVDPVKLDIPFYFNYIKRPMDLSTIERKLNVGAYEVPEQITEDFNLMVNNSIKFNGP 232
Query: 451 GQDVHIMAEQLLKIFE 466
+ MA + FE
Sbjct: 233 NAGISQMARNIQASFE 248
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 42/68 (61%), Gaps = 2/68 (2%)
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWEL-DR 610
+TYD K+ ++ + LP+ KL+ + IIKK ++ DDE+E+D+D++D T+ L +
Sbjct: 528 VTYDMKRIITERINDLPTSKLERAIDIIKKSMPNI-SEDDEVELDLDTLDNHTILTLYNT 586
Query: 611 FVTNYKKS 618
F Y+ S
Sbjct: 587 FFRQYESS 594
>gi|195124137|ref|XP_002006550.1| GI21118 [Drosophila mojavensis]
gi|193911618|gb|EDW10485.1| GI21118 [Drosophila mojavensis]
Length = 235
Score = 92.8 bits (229), Expect = 6e-16, Method: Composition-based stats.
Identities = 68/230 (29%), Positives = 109/230 (47%), Gaps = 33/230 (14%)
Query: 384 KHKH-GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFH 442
K+KH W+F P+D K LGL DY+ I++HPMDL TVK RLN N+Y S +FA DVR F+
Sbjct: 5 KYKHLAWIFYEPIDAKLLGLIDYYKIVKHPMDLSTVKYRLNSNFYASSADFASDVRRIFY 64
Query: 443 NAMTYNPKGQDVHIMAEQLLKIFED-------KWVVIESEYNREMRIGADYEMGFHTPTS 495
NA Y G + MA++L IFE+ ++ I+S G+D + T ++
Sbjct: 65 NAYLYTSPGHLCYDMAKKLQIIFENMYSKVPKPYIPIDSGKCSGCEYGSDEQSEDSTSSA 124
Query: 496 RKAPPLPPPLDMRRILDRSESITHPMDSRLKPISTTPSSRTPAPKKPKAKDPHKRDMTYD 555
+ P ++ + + + +PI P + P P + +
Sbjct: 125 QSKDNTPVCVEYNTQIRQEQ----------QPI---PLRKEPEPL-----------VISE 160
Query: 556 EKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDD-EIEVDIDSVDAET 604
E +L +Q L L N++ +I++ F + EIE D+ ++ T
Sbjct: 161 EDLELHIRVQQLDGIMLLNVIHMIRQMEGIAFAYGHREIEFDVRTLKTST 210
>gi|194885054|ref|XP_001976378.1| GG20046 [Drosophila erecta]
gi|190659565|gb|EDV56778.1| GG20046 [Drosophila erecta]
Length = 257
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 62/103 (60%), Gaps = 3/103 (2%)
Query: 374 SCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSP 430
+C +++++ + WVF P+D + LGLHDY I+R PMDL TV+ RLN Y +
Sbjct: 15 ACKVMIKRMFSTTYKNIAWVFYEPLDAQLLGLHDYHEIVREPMDLSTVRHRLNTGCYLTA 74
Query: 431 KEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIE 473
+FA+DVRL F+N Y G + MA+QL IFE+ + ++
Sbjct: 75 ADFAKDVRLIFYNTYLYTNPGHLCYHMAKQLQIIFEEMYAQVQ 117
>gi|358055176|dbj|GAA98945.1| hypothetical protein E5Q_05633 [Mixia osmundae IAM 14324]
Length = 754
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 61/112 (54%), Gaps = 7/112 (6%)
Query: 365 FGTGSKI----FKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGT 417
FG+ SK K C ++ + KH++ + F APVD + L + DY +++HPMDLGT
Sbjct: 428 FGSSSKSIQEGLKFCKDIIRDVQKHRYSEFTYPFLAPVDWQALNIPDYPNVVQHPMDLGT 487
Query: 418 VKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKW 469
+K RL+ +Y EF D RL N +NP VH M +L FE++W
Sbjct: 488 MKRRLDAGYYNHASEFEADFRLVIENCYKFNPVETPVHQMGRKLEAFFENRW 539
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 50/93 (53%)
Query: 373 KSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKE 432
K C A + L +++ F PVD LG+ YF IR+PMDL TV+ L N Y S +E
Sbjct: 225 KFCLATVRNLKRNREAPAFCNPVDPIVLGIPAYFAYIRNPMDLSTVEKHLIANEYASVEE 284
Query: 433 FAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIF 465
F +V+L F N +N + + +MA +L F
Sbjct: 285 FRSEVKLVFDNCCAFNREESPIGLMARRLEGAF 317
>gi|409083053|gb|EKM83410.1| hypothetical protein AGABI1DRAFT_31889 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 1349
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 126/263 (47%), Gaps = 21/263 (7%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHGWV---FNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
GT ++ K C +L L + +H V F PVD + L Y +++ PMDL T++ +L
Sbjct: 1011 GTAEQL-KYCGKILSDLNRKQHYNVASPFYEPVDWVKMDLPMYPKVVKKPMDLSTMRRKL 1069
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRI 482
+ N Y + K+F D +L N T+NP G V I L ++FE+KW + RE+
Sbjct: 1070 DNNEYAAAKDFYSDFKLMIKNCFTFNPVGTPVQIAGADLQRLFEEKWKSLPPL--REISD 1127
Query: 483 GADYEMGFHTPTSRKAPPLPPPLDMRR-----ILDRSESITHPMDSRLKPISTTPSSRTP 537
D E R+ + ++M + + + P+++T S+ P
Sbjct: 1128 SEDEEDSEDDDRQRQIADIEQKMEMLQNTLTSLKSKPAKKKKEERREKAPVAST--SKAP 1185
Query: 538 A------PKKPKAKDPHKRD--MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQH 589
+ P K K K P D +T+++K+ LS ++ L KL+ ++QII + +
Sbjct: 1186 SKQPKSQPSKKKNKKPIADDDVLTFEQKKDLSESIGKLDGTKLEKVIQIIHEGVPEIRDS 1245
Query: 590 DDEIEVDIDSVDAETLWELDRFV 612
+EIE++ID++ A L +L FV
Sbjct: 1246 TEEIELEIDTLPAAVLTKLYNFV 1268
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 52/107 (48%), Gaps = 12/107 (11%)
Query: 372 FKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN------ 425
+ C + + L K K F PVD L + YFTII+ PMDL TV+ +L +
Sbjct: 804 LRFCQSTVRSLKKIKDAAPFLRPVDPVALNIPHYFTIIKQPMDLSTVERKLASSNPQKPD 863
Query: 426 ------WYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFE 466
Y EF DVRL F+N +T+N V M +++ +IF+
Sbjct: 864 PNSENPRYNHADEFVADVRLMFYNCLTFNGPDHAVTAMGKRVEEIFD 910
>gi|358055177|dbj|GAA98946.1| hypothetical protein E5Q_05634 [Mixia osmundae IAM 14324]
Length = 750
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 61/112 (54%), Gaps = 7/112 (6%)
Query: 365 FGTGSKI----FKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGT 417
FG+ SK K C ++ + KH++ + F APVD + L + DY +++HPMDLGT
Sbjct: 424 FGSSSKSIQEGLKFCKDIIRDVQKHRYSEFTYPFLAPVDWQALNIPDYPNVVQHPMDLGT 483
Query: 418 VKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKW 469
+K RL+ +Y EF D RL N +NP VH M +L FE++W
Sbjct: 484 MKRRLDAGYYNHASEFEADFRLVIENCYKFNPVETPVHQMGRKLEAFFENRW 535
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 50/93 (53%)
Query: 373 KSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKE 432
K C A + L +++ F PVD LG+ YF IR+PMDL TV+ L N Y S +E
Sbjct: 221 KFCLATVRNLKRNREAPAFCNPVDPIVLGIPAYFAYIRNPMDLSTVEKHLIANEYASVEE 280
Query: 433 FAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIF 465
F +V+L F N +N + + +MA +L F
Sbjct: 281 FRSEVKLVFDNCCAFNREESPIGLMARRLEGAF 313
>gi|63100516|gb|AAH95028.1| Wu:fi25h02 protein, partial [Danio rerio]
Length = 600
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 65/119 (54%), Gaps = 6/119 (5%)
Query: 363 HGFGTGSKI---FKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLG 416
H G +K+ K C+A+L+++ KH W F PVD + LGL DY II PMD+
Sbjct: 261 HQVGRRTKLSERLKYCNAILKEMFSKKHSAYAWPFYKPVDAETLGLLDYHEIIHQPMDMS 320
Query: 417 TVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
T+K ++ Y +FA D+RL F N YNP G +V MA +L +FE ++ I E
Sbjct: 321 TIKKKMEAREYTDALQFAADMRLMFSNCYKYNPPGHEVVSMARKLQDVFEFRFSKIPDE 379
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 52/92 (56%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
++ L KH W F PVD L L DY+TII++PMDL T++ RL N+Y E ED
Sbjct: 40 VVIRALWKHHFSWPFRQPVDAVRLNLPDYYTIIKNPMDLTTIRKRLENNYYWKAMECVED 99
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN G D+ +MA+ L K+F +K
Sbjct: 100 FNTMFTNCYVYNRPGDDIVLMAQVLEKLFLEK 131
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWELDR 610
M+Y+EK++LS ++ LP +KL +V IIK R L D +EIE+D +++ TL L+
Sbjct: 515 MSYEEKRQLSLDINKLPGDKLGKVVNIIKAREPLLRDTDPEEIEIDFETLKPSTLRALEC 574
Query: 611 FVT 613
+V
Sbjct: 575 YVV 577
>gi|296191127|ref|XP_002743521.1| PREDICTED: bromodomain-containing protein 3 [Callithrix jacchus]
Length = 1364
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 78/154 (50%), Gaps = 19/154 (12%)
Query: 341 PPAESNKKSKLNGKKQAGN-------------ELAHGFGTGSKI---FKSCSALLEKLMK 384
PP K++K+ ++++G E+ G K+ + C ++L +++
Sbjct: 906 PPLSDPKQAKVVARRESGGRPIKPPKKDLEDGEVPQHAGKKGKLSEHLRYCDSILREMLS 965
Query: 385 HKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTF 441
KH W F PVD + L LHDY II+HPMDL TVK +++ Y + FA DVRL F
Sbjct: 966 KKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDGREYPDAQGFAADVRLMF 1025
Query: 442 HNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
N YNP +V MA +L +FE ++ + E
Sbjct: 1026 SNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE 1059
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 52/91 (57%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD L L DY II++PMD+GT+K RL N+Y S E +D
Sbjct: 687 VVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDF 746
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN D+ +MA+ L KIF K
Sbjct: 747 NTMFTNCYIYNKPTDDIVLMAQALEKIFLQK 777
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 49/75 (65%), Gaps = 4/75 (5%)
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLF-QHDDEIEVDIDSVDAETLWELDR 610
M+YDEK++LS ++ LP EKL +V II+ R SL + DEIE+D +++ TL EL+R
Sbjct: 1210 MSYDEKRQLSLDINRLPGEKLGRVVHIIQSREPSLRDSNPDEIEIDFETLKPTTLRELER 1269
Query: 611 FVTNYKKSLSKNKRK 625
+V K L K +RK
Sbjct: 1270 YV---KSCLQKKQRK 1281
>gi|259148377|emb|CAY81624.1| Bdf1p [Saccharomyces cerevisiae EC1118]
Length = 686
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 61/102 (59%), Gaps = 3/102 (2%)
Query: 372 FKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
K C ++L++LM KH + F PVD ++ L YF ++ PMDLGT+ +LN Y+
Sbjct: 318 MKFCQSVLKELMAKKHASYNYPFLEPVDPVSMNLPTYFDYVKEPMDLGTIAKKLNDWQYQ 377
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWV 470
+ ++F DVRL F N T+NP G V++M +L ++F KW
Sbjct: 378 TMEDFERDVRLVFKNCYTFNPDGTIVNMMGHRLEEVFNSKWA 419
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 40/76 (52%)
Query: 391 FNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPK 450
F PVD L + YF I+ PMDL T++ +LN Y+ P++ ED L +N++ +N
Sbjct: 173 FLQPVDPVKLDIPFYFNYIKRPMDLSTIERKLNVGAYEVPEQITEDFNLMVNNSIKFNGP 232
Query: 451 GQDVHIMAEQLLKIFE 466
+ MA + FE
Sbjct: 233 NAGISQMARNIQASFE 248
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 41/68 (60%), Gaps = 2/68 (2%)
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWEL-DR 610
+TYD K+ + + LP+ KL+ + IIKK ++ DDE+E+D+D++D T+ L +
Sbjct: 528 VTYDMKRIIKERINDLPTSKLERAIDIIKKSMPNI-SEDDEVELDLDTLDNHTILTLYNT 586
Query: 611 FVTNYKKS 618
F Y+ S
Sbjct: 587 FFRQYESS 594
>gi|207342738|gb|EDZ70407.1| YLR399Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 686
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 61/102 (59%), Gaps = 3/102 (2%)
Query: 372 FKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
K C ++L++LM KH + F PVD ++ L YF ++ PMDLGT+ +LN Y+
Sbjct: 318 MKFCQSVLKELMAKKHASYNYPFLEPVDPVSMNLPTYFDYVKEPMDLGTIAKKLNDWQYQ 377
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWV 470
+ ++F DVRL F N T+NP G V++M +L ++F KW
Sbjct: 378 TMEDFERDVRLVFKNCYTFNPDGTIVNMMGHRLEEVFNSKWA 419
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 40/76 (52%)
Query: 391 FNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPK 450
F PVD L + YF I+ PMDL T++ +LN Y+ P++ ED L +N++ +N
Sbjct: 173 FLQPVDPVKLDIPFYFNYIKRPMDLSTIERKLNVGAYEVPEQITEDFNLMVNNSIKFNGP 232
Query: 451 GQDVHIMAEQLLKIFE 466
+ MA + FE
Sbjct: 233 NAGISQMARNIQASFE 248
Score = 45.4 bits (106), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 42/68 (61%), Gaps = 2/68 (2%)
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWEL-DR 610
+TYD K+ ++ + LP+ KL+ + IIKK ++ DDE+E+D+D++D T+ L +
Sbjct: 528 VTYDMKRIITERINDLPTSKLERAIDIIKKSMPNI-SEDDEVELDLDTLDNHTILTLYNT 586
Query: 611 FVTNYKKS 618
F Y+ S
Sbjct: 587 FFRQYESS 594
>gi|384245392|gb|EIE18886.1| hypothetical protein COCSUDRAFT_45033 [Coccomyxa subellipsoidea
C-169]
Length = 554
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 108/235 (45%), Gaps = 40/235 (17%)
Query: 390 VFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN-------WYKSPKEFAEDVRLTFH 442
+F PVD L + DYF +++PM L V +L+ N YK EF +D+R +
Sbjct: 1 MFVEPVDPVKLKIVDYFQYVKNPMALNDVAGKLSHNPAKGSFRKYKDVYEFRDDMRQIWE 60
Query: 443 NAMTYNPKGQDVHIMAEQLLKIFEDKWVV--IESEYNRE-MRIGADYEMGFHTPTSRKAP 499
N YNP GQ V + + + +E KW + IE ++ E +R + M P
Sbjct: 61 NCRLYNPIGQPVRTNGDWMSEYWEKKWAISGIEQKWEEEQLRQRHEETM------LAGGP 114
Query: 500 PLPPPLDMRRILDRSESITHPMDSRLKPISTTPSSRTPAPKKPKAKDPHKRDMTYDEKQK 559
LP ++ +DR + D + P R MT++EK++
Sbjct: 115 ELPHHMEE---MDRELRMLQQQDGEVAA-------------------PGNRPMTFEEKRR 152
Query: 560 LSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWELDRFVTN 614
LS L SL +KL +++II + + E+EVDID ++ +TLW L+ VT+
Sbjct: 153 LSQGLGSLSGDKLGLVMEIIAE--CQRIDQEAEVEVDIDDLNQDTLWRLNALVTD 205
>gi|190405441|gb|EDV08708.1| protein BDF1 [Saccharomyces cerevisiae RM11-1a]
Length = 686
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 61/102 (59%), Gaps = 3/102 (2%)
Query: 372 FKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
K C ++L++LM KH + F PVD ++ L YF ++ PMDLGT+ +LN Y+
Sbjct: 318 MKFCQSVLKELMAKKHASYNYPFLEPVDPVSMNLPTYFDYVKEPMDLGTIAKKLNDWQYQ 377
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWV 470
+ ++F DVRL F N T+NP G V++M +L ++F KW
Sbjct: 378 TMEDFERDVRLVFKNCYTFNPDGTIVNMMGHRLEEVFNSKWA 419
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 40/76 (52%)
Query: 391 FNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPK 450
F PVD L + YF I+ PMDL T++ +LN Y+ P++ ED L +N++ +N
Sbjct: 173 FLQPVDPVKLDIPFYFNYIKRPMDLSTIERKLNVGAYEVPEQITEDFNLMVNNSIKFNGP 232
Query: 451 GQDVHIMAEQLLKIFE 466
+ MA + FE
Sbjct: 233 NAGISQMARNIQASFE 248
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 42/68 (61%), Gaps = 2/68 (2%)
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWEL-DR 610
+TYD K+ ++ + LP+ KL+ + IIKK ++ DDE+E+D+D++D T+ L +
Sbjct: 528 VTYDMKRIITERINDLPTSKLERAIDIIKKSMPNI-SEDDEVELDLDTLDNHTILTLYNT 586
Query: 611 FVTNYKKS 618
F Y+ S
Sbjct: 587 FFRQYESS 594
>gi|151940920|gb|EDN59302.1| bromodomain factor [Saccharomyces cerevisiae YJM789]
gi|323303730|gb|EGA57516.1| Bdf1p [Saccharomyces cerevisiae FostersB]
gi|323307897|gb|EGA61157.1| Bdf1p [Saccharomyces cerevisiae FostersO]
Length = 686
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 61/102 (59%), Gaps = 3/102 (2%)
Query: 372 FKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
K C ++L++LM KH + F PVD ++ L YF ++ PMDLGT+ +LN Y+
Sbjct: 318 MKFCQSVLKELMAKKHASYNYPFLEPVDPVSMNLPTYFDYVKEPMDLGTIAKKLNDWQYQ 377
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWV 470
+ ++F DVRL F N T+NP G V++M +L ++F KW
Sbjct: 378 TMEDFERDVRLVFKNCYTFNPDGTIVNMMGHRLEEVFNSKWA 419
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 40/76 (52%)
Query: 391 FNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPK 450
F PVD L + YF I+ PMDL T++ +LN Y+ P++ ED L +N++ +N
Sbjct: 173 FLQPVDPVKLDIPFYFNYIKRPMDLSTIERKLNVGAYEVPEQITEDFNLMVNNSIKFNGP 232
Query: 451 GQDVHIMAEQLLKIFE 466
+ MA + FE
Sbjct: 233 NAGISQMARNIQASFE 248
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 42/68 (61%), Gaps = 2/68 (2%)
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWEL-DR 610
+TYD K+ ++ + LP+ KL+ + IIKK ++ DDE+E+D+D++D T+ L +
Sbjct: 528 VTYDMKRIITERINDLPTSKLERAIDIIKKSMPNI-SEDDEVELDLDTLDNHTILTLYNT 586
Query: 611 FVTNYKKS 618
F Y+ S
Sbjct: 587 FFRQYESS 594
>gi|608567|gb|AAA89115.1| Bdf1p [Saccharomyces cerevisiae]
Length = 685
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 61/102 (59%), Gaps = 3/102 (2%)
Query: 372 FKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
K C ++L++LM KH + F PVD ++ L YF ++ PMDLGT+ +LN Y+
Sbjct: 317 MKFCQSVLKELMAKKHASYNYPFLEPVDPVSMNLPTYFDYVKEPMDLGTIAKKLNDWQYQ 376
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWV 470
+ ++F DVRL F N T+NP G V++M +L ++F KW
Sbjct: 377 TMEDFERDVRLVFKNCYTFNPDGTIVNMMGHRLEEVFNSKWA 418
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 40/76 (52%)
Query: 391 FNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPK 450
F PVD L + YF I+ PMDL T++ +LN Y+ P++ ED L +N++ +N
Sbjct: 172 FLQPVDPVKLDIPFYFNYIKRPMDLSTIERKLNVGAYEVPEQITEDFNLMVNNSIKFNGP 231
Query: 451 GQDVHIMAEQLLKIFE 466
+ MA + FE
Sbjct: 232 NAGISQMARNIQASFE 247
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 42/68 (61%), Gaps = 2/68 (2%)
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWEL-DR 610
+TYD K+ ++ + LP+ KL+ + IIKK ++ DDE+E+D+D++D T+ L +
Sbjct: 527 VTYDMKRIITERINDLPTSKLERAIDIIKKSMPNI-SEDDEVELDLDTLDNHTILTLYNT 585
Query: 611 FVTNYKKS 618
F Y+ S
Sbjct: 586 FFRQYESS 593
>gi|365764189|gb|EHN05714.1| Bdf1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 686
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 61/102 (59%), Gaps = 3/102 (2%)
Query: 372 FKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
K C ++L++LM KH + F PVD ++ L YF ++ PMDLGT+ +LN Y+
Sbjct: 318 MKFCQSVLKELMAKKHASYNYPFLEPVDPVSMNLPTYFDYVKEPMDLGTIAKKLNDWQYQ 377
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWV 470
+ ++F DVRL F N T+NP G V++M +L ++F KW
Sbjct: 378 TMEDFERDVRLVFKNCYTFNPDGTIVNMMGHRLEEVFNSKWA 419
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 40/76 (52%)
Query: 391 FNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPK 450
F PVD L + YF I+ PMDL T++ +LN Y+ P++ ED L +N++ +N
Sbjct: 173 FLQPVDPVKLDIPFYFNYIKRPMDLSTIERKLNVGAYEVPEQITEDFNLMVNNSIKFNGP 232
Query: 451 GQDVHIMAEQLLKIFE 466
+ MA + FE
Sbjct: 233 NAGISQMARNIQASFE 248
Score = 45.4 bits (106), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 42/68 (61%), Gaps = 2/68 (2%)
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWEL-DR 610
+TYD K+ ++ + LP+ KL+ + IIKK ++ DDE+E+D+D++D T+ L +
Sbjct: 528 VTYDMKRIIAERINDLPTSKLERAIDIIKKSMPNI-SEDDEVELDLDTLDNHTILTLYNT 586
Query: 611 FVTNYKKS 618
F Y+ S
Sbjct: 587 FFRQYESS 594
>gi|323336416|gb|EGA77684.1| Bdf1p [Saccharomyces cerevisiae Vin13]
Length = 686
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 61/102 (59%), Gaps = 3/102 (2%)
Query: 372 FKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
K C ++L++LM KH + F PVD ++ L YF ++ PMDLGT+ +LN Y+
Sbjct: 318 MKFCQSVLKELMAKKHASYNYPFLEPVDPVSMNLPTYFDYVKEPMDLGTIAKKLNDWQYQ 377
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWV 470
+ ++F DVRL F N T+NP G V++M +L ++F KW
Sbjct: 378 TMEDFERDVRLVFKNCYTFNPDGTIVNMMGHRLEEVFNSKWA 419
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 40/76 (52%)
Query: 391 FNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPK 450
F PVD L + YF I+ PMDL T++ +LN Y+ P++ ED L +N++ +N
Sbjct: 173 FLQPVDPVKLDIPFYFNYIKRPMDLSTIERKLNVGAYEVPEQITEDFNLMVNNSIKFNGP 232
Query: 451 GQDVHIMAEQLLKIFE 466
+ MA + FE
Sbjct: 233 NAGISQMARNIQASFE 248
Score = 45.4 bits (106), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 42/68 (61%), Gaps = 2/68 (2%)
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWEL-DR 610
+TYD K+ ++ + LP+ KL+ + IIKK ++ DDE+E+D+D++D T+ L +
Sbjct: 528 VTYDMKRIITERINDLPTSKLERAIDIIKKSMPNI-SEDDEVELDLDTLDNHTILTLYNT 586
Query: 611 FVTNYKKS 618
F Y+ S
Sbjct: 587 FFRQYESS 594
>gi|6323431|ref|NP_013503.1| Bdf1p [Saccharomyces cerevisiae S288c]
gi|5921175|sp|P35817.3|BDF1_YEAST RecName: Full=Bromodomain-containing factor 1
gi|625115|gb|AAB82357.1| Bdf1p [Saccharomyces cerevisiae]
gi|285813804|tpg|DAA09700.1| TPA: Bdf1p [Saccharomyces cerevisiae S288c]
gi|392297901|gb|EIW09000.1| Bdf1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 686
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 61/102 (59%), Gaps = 3/102 (2%)
Query: 372 FKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
K C ++L++LM KH + F PVD ++ L YF ++ PMDLGT+ +LN Y+
Sbjct: 318 MKFCQSVLKELMAKKHASYNYPFLEPVDPVSMNLPTYFDYVKEPMDLGTIAKKLNDWQYQ 377
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWV 470
+ ++F DVRL F N T+NP G V++M +L ++F KW
Sbjct: 378 TMEDFERDVRLVFKNCYTFNPDGTIVNMMGHRLEEVFNSKWA 419
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 40/76 (52%)
Query: 391 FNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPK 450
F PVD L + YF I+ PMDL T++ +LN Y+ P++ ED L +N++ +N
Sbjct: 173 FLQPVDPVKLDIPFYFNYIKRPMDLSTIERKLNVGAYEVPEQITEDFNLMVNNSIKFNGP 232
Query: 451 GQDVHIMAEQLLKIFE 466
+ MA + FE
Sbjct: 233 NAGISQMARNIQASFE 248
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 42/68 (61%), Gaps = 2/68 (2%)
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWEL-DR 610
+TYD K+ ++ + LP+ KL+ + IIKK ++ DDE+E+D+D++D T+ L +
Sbjct: 528 VTYDMKRIITERINDLPTSKLERAIDIIKKSMPNI-SEDDEVELDLDTLDNHTILTLYNT 586
Query: 611 FVTNYKKS 618
F Y+ S
Sbjct: 587 FFRQYESS 594
>gi|195489088|ref|XP_002092589.1| GE11582 [Drosophila yakuba]
gi|194178690|gb|EDW92301.1| GE11582 [Drosophila yakuba]
Length = 257
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 63/103 (61%), Gaps = 3/103 (2%)
Query: 374 SCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSP 430
+C ++++L + + WVF P+D + LGLHDY I+R PMDL TV+ RLN Y +
Sbjct: 15 ACKVIIKRLFSNTYKNIAWVFYEPLDAQLLGLHDYHEIVREPMDLSTVRHRLNTACYLTA 74
Query: 431 KEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIE 473
+FA+D+RL F+N Y G + MA+QL IFE+ + ++
Sbjct: 75 ADFAKDMRLIFYNTYLYTNPGHLCYHMAKQLQIIFEEMYAQVQ 117
>gi|301113438|ref|XP_002998489.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262111790|gb|EEY69842.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 910
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 61/103 (59%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
LL+KLM ++GW FN PVD + DYF II+ PMDLGT+K RL Y S + FA DV
Sbjct: 114 LLQKLMDSEYGWTFNNPVDPVQWNIPDYFDIIKCPMDLGTIKKRLEAEHYNSVEAFAGDV 173
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREM 480
RL F N + YN +I A+QLL F ++++ +++
Sbjct: 174 RLVFENCIAYNSSTNKFNIAAKQLLASFNKSLASLKNQLEKQL 216
>gi|296233153|ref|XP_002761896.1| PREDICTED: bromodomain-containing protein 4 [Callithrix jacchus]
Length = 985
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 60/107 (56%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+L+ L KH+ W F PVD L L DY+ II+ PMD+GT+K RL N+Y + +E +D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGA 484
F N YN G D+ +MAE L K+F K + +E M + A
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEETEIMIVQA 176
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 41/70 (58%), Gaps = 3/70 (4%)
Query: 369 SKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN 425
S+ K CS +L+++ KH W F PVDV+ LGLHDY II+HPMD+ T+K
Sbjct: 351 SEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKDVFEMR 410
Query: 426 WYKSPKEFAE 435
+ K P E E
Sbjct: 411 FAKMPDEREE 420
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 51/79 (64%), Gaps = 5/79 (6%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLF-QHDDEIEVDIDSVDAETLWEL 608
+ M+Y+EK++LS ++ LP EKL +V II+ R SL + DEIE+D +++ TL EL
Sbjct: 565 KPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLREL 624
Query: 609 DRFVTNYKKSLSKNKRKAE 627
+R+VT S + KRK +
Sbjct: 625 ERYVT----SCLRKKRKPQ 639
>gi|323347321|gb|EGA81594.1| Bdf1p [Saccharomyces cerevisiae Lalvin QA23]
Length = 635
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 61/102 (59%), Gaps = 3/102 (2%)
Query: 372 FKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
K C ++L++LM KH + F PVD ++ L YF ++ PMDLGT+ +LN Y+
Sbjct: 318 MKFCQSVLKELMAKKHASYNYPFLEPVDPVSMNLPTYFDYVKEPMDLGTIAKKLNDWQYQ 377
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWV 470
+ ++F DVRL F N T+NP G V++M +L ++F KW
Sbjct: 378 TMEDFERDVRLVFKNCYTFNPDGTIVNMMGHRLEEVFNSKWA 419
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 40/76 (52%)
Query: 391 FNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPK 450
F PVD L + YF I+ PMDL T++ +LN Y+ P++ ED L +N++ +N
Sbjct: 173 FLQPVDPVKLDIPFYFNYIKRPMDLSTIERKLNVGAYEVPEQITEDFNLMVNNSIKFNGP 232
Query: 451 GQDVHIMAEQLLKIFE 466
+ MA + FE
Sbjct: 233 NAGISQMARNIQASFE 248
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 41/68 (60%), Gaps = 2/68 (2%)
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWEL-DR 610
+TYD K+ + + LP+ KL+ + IIKK ++ DDE+E+D+D++D T+ L +
Sbjct: 528 VTYDMKRIIXERINDLPTSKLERAIDIIKKSMPNI-SEDDEVELDLDTLDNHTILTLYNT 586
Query: 611 FVTNYKKS 618
F Y+ S
Sbjct: 587 FFRQYESS 594
>gi|15231174|ref|NP_190796.1| transcription factor GTE6 [Arabidopsis thaliana]
gi|75172388|sp|Q9FT54.1|GTE6_ARATH RecName: Full=Transcription factor GTE6; AltName:
Full=Bromodomain-containing protein GTE6; AltName:
Full=Protein GENERAL TRANSCRIPTION FACTOR GROUP E6;
AltName: Full=Protein GLOBAL TRANSCRIPTION FACTOR GROUP
E6
gi|10045561|emb|CAC07919.1| putative protein [Arabidopsis thaliana]
gi|332645404|gb|AEE78925.1| transcription factor GTE6 [Arabidopsis thaliana]
Length = 369
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 62/102 (60%), Gaps = 3/102 (2%)
Query: 371 IFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL---NKNWY 427
+ + + ++ +HK W F PV+V+ LGLHDYF +I PMD T+K ++ + Y
Sbjct: 94 LMRQFGTIFRQITQHKCAWPFMHPVNVEGLGLHDYFEVIDKPMDFSTIKNQMEAKDGTGY 153
Query: 428 KSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKW 469
K + D+RL F NAM YN + DV+ MA++LL+ FE+KW
Sbjct: 154 KHVMQIYADMRLVFENAMNYNEETSDVYSMAKKLLEKFEEKW 195
>gi|397640630|gb|EJK74224.1| hypothetical protein THAOC_04109 [Thalassiosira oceanica]
Length = 824
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 70/116 (60%), Gaps = 4/116 (3%)
Query: 354 KKQAGNELAHGFGTGSKIFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPM 413
+KQAG E A+ K F L+ K+++H++GW+F VD LGL DYF +I PM
Sbjct: 707 EKQAGKESANQQWMIDKYF----PLVRKMIEHENGWLFKDAVDPVELGLVDYFDVIETPM 762
Query: 414 DLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKW 469
DL V+ +L + YKS F DV+L F+NA+ +N + DV ++A+++L +F +
Sbjct: 763 DLSLVEKKLKQGCYKSEAMFESDVKLVFNNAIVFNGEESDVGVIAKEMLGLFSSHF 818
>gi|348670161|gb|EGZ09983.1| hypothetical protein PHYSODRAFT_460736 [Phytophthora sojae]
Length = 924
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 60/103 (58%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
LL KLM ++GW FN PVD + DYF II+ PMDLGT+K RL Y S + FA DV
Sbjct: 120 LLTKLMDSEYGWTFNNPVDPVQWNIPDYFDIIKCPMDLGTIKKRLEAEHYNSVEAFAGDV 179
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREM 480
RL F N + YN +I A+QLL F ++++ +++
Sbjct: 180 RLVFENCIAYNSSTNKFNIAAKQLLASFNKSLASLKNQLEKQL 222
>gi|147780961|emb|CAN72641.1| hypothetical protein VITISV_032231 [Vitis vinifera]
Length = 541
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 58/88 (65%), Gaps = 8/88 (9%)
Query: 300 LSISTVENSLGLSENVEKEKRTPKANQFYRNSEFLLAKDKFPPAESNKKSKLNGKKQAGN 359
LS+S + NS G E +EKEKRTPK N++YRN +F+L KDKFPP ESNKK + NG
Sbjct: 29 LSVSVMGNSHGTGEFMEKEKRTPKVNKYYRNPDFVLRKDKFPPPESNKKPRSNG------ 82
Query: 360 ELAHGFGTGSKIFKSCSALLEKLMKHKH 387
+ ++ FK+CS L KLMKHKH
Sbjct: 83 --VGIYEYVAQAFKNCSNFLAKLMKHKH 108
>gi|328863827|gb|EGG12926.1| hypothetical protein MELLADRAFT_46486 [Melampsora larici-populina
98AG31]
Length = 339
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 58/101 (57%), Gaps = 3/101 (2%)
Query: 372 FKSCSALLEKLMK---HKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
K C +L ++ K K W F PVD LG+ +Y TII+ PMDL T+K +L++ YK
Sbjct: 89 LKFCKEVLREVNKKAYEKFVWPFYEPVDPVKLGVPEYLTIIKKPMDLSTIKQKLDRGEYK 148
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKW 469
+ FA D RL +N T+NP G V+ +QL +FE KW
Sbjct: 149 AGAAFAADFRLMLNNCFTFNPVGTPVYNFGKQLECLFEQKW 189
>gi|431892496|gb|ELK02931.1| Bromodomain-containing protein 4 [Pteropus alecto]
Length = 1345
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 60/107 (56%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+L+ L KH+ W F PVD L L DY+ II+ PMD+GT+K RL N+Y + +E +D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGA 484
F N YN G D+ +MAE L K+F K + +E M + A
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEETEIMIVQA 176
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 41/68 (60%)
Query: 408 IIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFED 467
II+HPMD+ T+K++L Y+ +EF DVRL F N YNP +V MA +L +FE
Sbjct: 393 IIKHPMDMSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEM 452
Query: 468 KWVVIESE 475
++ + E
Sbjct: 453 RFAKMPDE 460
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 51/79 (64%), Gaps = 5/79 (6%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLF-QHDDEIEVDIDSVDAETLWEL 608
+ M+Y+EK++LS ++ LP EKL +V II+ R SL + DEIE+D +++ TL EL
Sbjct: 608 KPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLREL 667
Query: 609 DRFVTNYKKSLSKNKRKAE 627
+R+VT S + KRK +
Sbjct: 668 ERYVT----SCLRKKRKPQ 682
>gi|348682241|gb|EGZ22057.1| hypothetical protein PHYSODRAFT_491564 [Phytophthora sojae]
Length = 1223
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/99 (47%), Positives = 62/99 (62%), Gaps = 4/99 (4%)
Query: 372 FKSCSALLEKLM---KHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
F+ + +L KLM +++HG VFN PVD L L Y TI++HPMDLGT+K L Y
Sbjct: 378 FEKVTDILLKLMSDPRNRHG-VFNTPVDPVALELPTYTTIVQHPMDLGTIKRNLAAGEYL 436
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFED 467
++F DVRL F NAM +NP+ +H+ AE LLK F D
Sbjct: 437 ELEDFVSDVRLVFENAMLFNPESHYIHVDAEVLLKRFND 475
>gi|299116970|emb|CBN75074.1| hypothetical protein Esi_0066_0081 [Ectocarpus siliculosus]
Length = 1147
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/111 (45%), Positives = 63/111 (56%), Gaps = 11/111 (9%)
Query: 361 LAHGFGTGSKIFKSCSALLEKL--MKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTV 418
L HG + C +L L ++ K W FN PVD L L +Y TII+ PMDLGTV
Sbjct: 694 LTHGL-------RRCVTVLNNLRAIRGKSEW-FNEPVDYVGLNLPEYTTIIKRPMDLGTV 745
Query: 419 KTRLNKNWYKSPKEFAEDVRLTFHNAMTYNP-KGQDVHIMAEQLLKIFEDK 468
K++L YK+ EFA +VRL F NA YN + DVHI A LL +F+ K
Sbjct: 746 KSKLESGEYKNTVEFAHEVRLVFSNACHYNSDETSDVHIAARHLLHVFDAK 796
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWELDRF 611
+T+DEK+ LS + +L L +V+II+ R L D+EIE+DIDS+D TL +L F
Sbjct: 1063 LTFDEKKALSVAINNLDQSNLTRVVEIIQAR-MPLGSSDEEIELDIDSMDNLTLRDLQGF 1121
Query: 612 V 612
+
Sbjct: 1122 I 1122
>gi|345565069|gb|EGX48025.1| hypothetical protein AOL_s00081g352 [Arthrobotrys oligospora ATCC
24927]
Length = 890
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 59/101 (58%), Gaps = 3/101 (2%)
Query: 372 FKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
FK C ++++L K +H + F PVD L + DYF II+ PMD+ ++ +LN N Y
Sbjct: 529 FKFCETIMKELWKKQHNSIAYPFYNPVDPVALEIPDYFKIIKKPMDMSEIQRKLNHNEYN 588
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKW 469
+ EF D+RL F+N +NP V+ +QL +F++KW
Sbjct: 589 NSNEFEADIRLMFNNCYKFNPPSSPVYDCGKQLEAVFDEKW 629
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 47/96 (48%), Gaps = 3/96 (3%)
Query: 356 QAGNELAHGF-GTGSKIFKSCSAL--LEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHP 412
Q G A F G I ++ AL L+ + + K F PVD L L YF II++P
Sbjct: 290 QPGPSKASVFTGDPMPIHQTKFALSNLKNIKRLKDAQAFLNPVDPVKLQLPTYFEIIKNP 349
Query: 413 MDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYN 448
M L ++ +L N Y +P E DV L N++ +N
Sbjct: 350 MSLFDIEKKLTANEYHNPAELKGDVHLMVQNSILFN 385
>gi|344251852|gb|EGW07956.1| Bromodomain testis-specific protein [Cricetulus griseus]
Length = 565
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 53/89 (59%)
Query: 387 HGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMT 446
+ W F PVD LGLH+Y+ I+++PMDLGT+K +++ YK EFA DVRL F N
Sbjct: 9 YAWPFYNPVDADALGLHNYYDIVKNPMDLGTIKGKMDNQEYKDAYEFAADVRLMFMNCYK 68
Query: 447 YNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
YNP +V MA L +FE + I E
Sbjct: 69 YNPPDHEVVSMARMLQDVFEMHFAKIPDE 97
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWELDR 610
M YDEK++LS ++ LP EKL IV II+ R SL + DEIE+D +++ TL EL++
Sbjct: 225 MNYDEKRQLSLDINKLPGEKLGRIVHIIQSREPSLRNSNPDEIEIDFETLKPSTLRELEK 284
Query: 611 FV 612
+V
Sbjct: 285 YV 286
>gi|195397557|ref|XP_002057395.1| GJ16365 [Drosophila virilis]
gi|194147162|gb|EDW62881.1| GJ16365 [Drosophila virilis]
Length = 429
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 59/105 (56%), Gaps = 3/105 (2%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ + KH W F PVD K L L DY II+ PMD+GT+K RL N+Y S KE D
Sbjct: 46 VMKVIWKHHFSWPFQQPVDAKKLNLPDYHKIIKQPMDMGTIKKRLENNYYWSAKEAIHDF 105
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRI 482
F N YN G+DV +MA+ L K+F K IES E+ +
Sbjct: 106 NTMFTNCYVYNKPGEDVVVMAQTLEKVFLQK---IESMPKEELEL 147
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 47/80 (58%), Gaps = 3/80 (3%)
Query: 369 SKIFKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN 425
S KSC+ +L++L KH W F PVD + LGLHDY II+ PMDLGTVK +++
Sbjct: 343 SDALKSCNEILKELFSKKHSGYAWPFYKPVDAELLGLHDYHDIIKKPMDLGTVKRKMDNR 402
Query: 426 WYKSPKEFAEDVRLTFHNAM 445
YKS EFA + H +
Sbjct: 403 EYKSAPEFAARCSINIHQLL 422
>gi|403363335|gb|EJY81411.1| Bromodomain containing protein [Oxytricha trifallax]
Length = 726
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 61/98 (62%), Gaps = 4/98 (4%)
Query: 373 KSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKE 432
K+ L+ + K W+F+ PVD + LG+ DYF IIR+PMD GT+K RLN N+Y +E
Sbjct: 620 KAAKRLMNSIWKFNQSWIFHEPVDPERLGVPDYFNIIRNPMDFGTIKQRLNTNYYHRMQE 679
Query: 433 FAEDVRLTFHNAMTYNPK----GQDVHIMAEQLLKIFE 466
F +D++L F N + +N + G+ I+ E+ +++E
Sbjct: 680 FLDDMQLVFDNCLKFNGEENNIGKICKIVREEFKRLYE 717
>gi|68051321|gb|AAY84924.1| IP09966p [Drosophila melanogaster]
Length = 276
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/100 (44%), Positives = 61/100 (61%), Gaps = 5/100 (5%)
Query: 374 SCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSP 430
+C ++++L + WVF P+D + LGLHDY I+R PMDL TV+ RLN Y S
Sbjct: 24 ACKVIIKRLFSSTYKNIAWVFYEPLDPQLLGLHDYHEIVREPMDLSTVRHRLNTGCYLSA 83
Query: 431 KEFAEDVRLTFHNAMTY-NPKGQDVHIMAEQLLKIFEDKW 469
+FA+D+RL F+N Y NP H MA+QL IFE+ +
Sbjct: 84 ADFAKDIRLIFYNTYLYTNPDHLCYH-MAKQLQIIFEEMY 122
>gi|24659254|ref|NP_726307.1| CG30417 [Drosophila melanogaster]
gi|7291557|gb|AAF46981.1| CG30417 [Drosophila melanogaster]
gi|66571202|gb|AAY51566.1| IP01291p [Drosophila melanogaster]
gi|220943344|gb|ACL84215.1| CG30417-PA [synthetic construct]
gi|220953316|gb|ACL89201.1| CG30417-PA [synthetic construct]
Length = 268
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/100 (44%), Positives = 61/100 (61%), Gaps = 5/100 (5%)
Query: 374 SCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSP 430
+C ++++L + WVF P+D + LGLHDY I+R PMDL TV+ RLN Y S
Sbjct: 16 ACKVIIKRLFSSTYKNIAWVFYEPLDPQLLGLHDYHEIVREPMDLSTVRHRLNTGCYLSA 75
Query: 431 KEFAEDVRLTFHNAMTY-NPKGQDVHIMAEQLLKIFEDKW 469
+FA+D+RL F+N Y NP H MA+QL IFE+ +
Sbjct: 76 ADFAKDIRLIFYNTYLYTNPDHLCYH-MAKQLQIIFEEMY 114
>gi|432110957|gb|ELK34430.1| Bromodomain testis-specific protein, partial [Myotis davidii]
Length = 842
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 61/112 (54%), Gaps = 8/112 (7%)
Query: 372 FKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVK-----TRLN 423
+ CS +L++L KH W F PVDV LGLH+Y+ I+++PMDLG + +++
Sbjct: 227 LRHCSEILKELFAKKHFSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGNPEFLFTILKMD 286
Query: 424 KNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
YK EFA DVRL F N YNP +V MA L +FE + I E
Sbjct: 287 NQEYKDAYEFAADVRLMFMNCYRYNPPDHEVVTMARMLQDVFEMHFAKIPDE 338
Score = 45.4 bits (106), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 55/99 (55%), Gaps = 11/99 (11%)
Query: 524 RLKPISTTPSSRTPAPKKPKAK--------DPHKRDMTYDEKQKLSTNLQSLPSEKLDNI 575
+ K + S++ PKK + + + + M++DEK++LS ++ LP +KL +
Sbjct: 429 KFKQMKIKEKSKSNEPKKRQQPVLALESEDEDNAKPMSHDEKRRLSLDINKLPGDKLGKV 488
Query: 576 VQIIKKRNSSL--FQHDDEIEVDIDSVDAETLWELDRFV 612
+ II R SL H+D IE+D +++ TL EL+++V
Sbjct: 489 LHIIHSREPSLRNSSHED-IEIDFETLKTTTLRELEKYV 526
>gi|448081188|ref|XP_004194827.1| Piso0_005345 [Millerozyma farinosa CBS 7064]
gi|359376249|emb|CCE86831.1| Piso0_005345 [Millerozyma farinosa CBS 7064]
Length = 645
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 61/101 (60%), Gaps = 3/101 (2%)
Query: 372 FKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
+ C+ L++L KH + F PVD L + +Y II+ PMDL TV+++L N Y+
Sbjct: 320 LRFCNQTLKELTSKKHYSYSFPFLTPVDAVALNIPNYHEIIKEPMDLSTVQSKLANNQYE 379
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKW 469
+ EF DVRL F N T+NP+G DV++M +L +F+ KW
Sbjct: 380 NGDEFERDVRLIFKNCYTFNPEGTDVNMMGHRLESVFDKKW 420
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%)
Query: 391 FNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPK 450
F PVD L + Y+ I+ PMDL T++ +L N Y+ P + +D L N + +N +
Sbjct: 176 FLHPVDTVKLNVPFYYNYIKRPMDLSTIERKLAVNAYEDPSQVVDDFNLMVSNCIKFNGE 235
Query: 451 GQDVHIMAEQLLKIFE 466
+ MA+ FE
Sbjct: 236 NSGISKMAKNTQAHFE 251
>gi|198456597|ref|XP_001360386.2| GA15830 [Drosophila pseudoobscura pseudoobscura]
gi|198135670|gb|EAL24961.2| GA15830 [Drosophila pseudoobscura pseudoobscura]
Length = 265
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 90/230 (39%), Gaps = 62/230 (26%)
Query: 374 SCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSP 430
+C A++ KL ++ W+F P+D LGLHDY I++ PMDL +++TRL Y +
Sbjct: 24 ACKAIIRKLFSSQYKKLAWIFYEPIDAPYLGLHDYHKIVKKPMDLNSIRTRLQAGLYVNA 83
Query: 431 KEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEMGF 490
EF DVRL F N Y H MA++L IFE + I S
Sbjct: 84 DEFVRDVRLMFDNTYLYTTPDHLCHQMAKKLQAIFEAMFFEIAST--------------- 128
Query: 491 HTPTSRKAPPLPPPLDMRRILDRSESITHPMDSRLKPISTTPSSRTPAPKKPK------- 543
D S++IT S + PI+T P AP P
Sbjct: 129 ---------------------DSSDTITETDVSSMFPIATIPD----APINPHKDGGVKM 163
Query: 544 ------------AKDPHKRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKK 581
A + R T E L LQ L E L ++ IIK+
Sbjct: 164 TRARRQQLQSRSANEAAVRPWTAKENNHLGDRLQELKGEVLHRVIHIIKE 213
>gi|311664|emb|CAA79377.1| BDF1 [Saccharomyces cerevisiae]
Length = 687
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 61/102 (59%), Gaps = 3/102 (2%)
Query: 372 FKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
K C ++L++LM KH + F PVD ++ L YF ++ PMDLGT+ +LN Y+
Sbjct: 319 MKFCQSVLKELMAKKHASYNYPFLEPVDPVSMNLPTYFDYVKEPMDLGTIAKKLNDWQYQ 378
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWV 470
+ ++F +VRL F N T+NP G V++M +L ++F KW
Sbjct: 379 TMEDFEREVRLVFKNCYTFNPDGTIVNMMGHRLEEVFNSKWA 420
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 40/76 (52%)
Query: 391 FNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPK 450
F PVD L + YF I+ PMDL T++ +LN Y+ P++ ED L +N++ +N
Sbjct: 174 FLQPVDPVKLDIPFYFNYIKRPMDLSTIERKLNVGAYEVPEQITEDFNLMVNNSIKFNGP 233
Query: 451 GQDVHIMAEQLLKIFE 466
+ MA + FE
Sbjct: 234 NAGISQMARNIQASFE 249
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 42/68 (61%), Gaps = 2/68 (2%)
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWEL-DR 610
+TYD K+ ++ + LP+ KL+ + IIKK ++ DDE+E+D+D++D T+ L +
Sbjct: 529 VTYDMKRIITERINDLPTSKLERAIDIIKKSMPNI-SEDDEVELDLDTLDNHTILTLYNT 587
Query: 611 FVTNYKKS 618
F Y+ S
Sbjct: 588 FFRQYESS 595
>gi|302848828|ref|XP_002955945.1| hypothetical protein VOLCADRAFT_119228 [Volvox carteri f.
nagariensis]
gi|300258671|gb|EFJ42905.1| hypothetical protein VOLCADRAFT_119228 [Volvox carteri f.
nagariensis]
Length = 569
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 103/223 (46%), Gaps = 19/223 (8%)
Query: 363 HGFGTGSKIFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
H + K CS L+ + +HK + FN PVD DY II PMD T+K R
Sbjct: 78 HRIRLAEVVQKHCSTALKSITQHKWAFPFNNPVDTARFP--DYPKIISSPMDFSTIKARQ 135
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKW-VVIESEYNREMR 481
+ +Y+ PK++ DV L F NA YN G D ++MA+ L ++ E+K+ VI
Sbjct: 136 DGGYYRDPKDWWSDVMLVFSNAKRYNAPGSDCYLMAQTLQEVSEEKYDKVIAPRLAEAEA 195
Query: 482 IGADYEMGFHTPTSRKAPPLPPPLDMRRILDRSESITHPMDSRLKPISTTPSSRTPAPKK 541
+ E+ L +R ++ I+ MD++ + + A ++
Sbjct: 196 VTLREEVH---------------LKKKRAELVNQQISEAMDAQCAVLFNLMAELHAAIRE 240
Query: 542 PKAKDPHKRD-MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRN 583
K+ + +T +EKQ L+ +Q LP+ +L+ IV + R+
Sbjct: 241 AKSLASSLCEPLTLEEKQALAATIQGLPTAQLEAIVAFVASRH 283
>gi|323332433|gb|EGA73842.1| Bdf1p [Saccharomyces cerevisiae AWRI796]
Length = 420
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 61/101 (60%), Gaps = 3/101 (2%)
Query: 372 FKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
K C ++L++LM KH + F PVD ++ L YF ++ PMDLGT+ +LN Y+
Sbjct: 318 MKFCQSVLKELMAKKHASYNYPFLEPVDPVSMNLPTYFDYVKEPMDLGTIAKKLNDWQYQ 377
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKW 469
+ ++F DVRL F N T+NP G V++M +L ++F KW
Sbjct: 378 TMEDFERDVRLVFKNCYTFNPDGTIVNMMGHRLEEVFNSKW 418
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 40/76 (52%)
Query: 391 FNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPK 450
F PVD L + YF I+ PMDL T++ +LN Y+ P++ ED L +N++ +N
Sbjct: 173 FLQPVDPVKLDIPFYFNYIKRPMDLSTIERKLNVGAYEVPEQITEDFNLMVNNSIKFNGP 232
Query: 451 GQDVHIMAEQLLKIFE 466
+ MA + FE
Sbjct: 233 NAGISQMARNIQASFE 248
>gi|256269147|gb|EEU04482.1| Bdf1p [Saccharomyces cerevisiae JAY291]
Length = 686
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 61/102 (59%), Gaps = 3/102 (2%)
Query: 372 FKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
K C ++L++L+ KH + F PVD ++ L YF ++ PMDLGT+ +LN Y+
Sbjct: 318 MKFCQSVLKELVAKKHASYNYPFLEPVDPVSMNLPTYFDYVKEPMDLGTIAKKLNDWQYQ 377
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWV 470
+ ++F DVRL F N T+NP G V++M +L ++F KW
Sbjct: 378 TMEDFERDVRLVFKNCYTFNPDGTIVNMMGHRLEEVFNSKWA 419
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 40/76 (52%)
Query: 391 FNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPK 450
F PVD L + YF I+ PMDL T++ +LN Y+ P++ ED L +N++ +N
Sbjct: 173 FLQPVDTVKLDIPFYFNYIKRPMDLSTIERKLNVGAYEVPEQITEDFNLMVNNSIKFNGP 232
Query: 451 GQDVHIMAEQLLKIFE 466
+ MA + FE
Sbjct: 233 NAGISQMARNIQASFE 248
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 42/68 (61%), Gaps = 2/68 (2%)
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWEL-DR 610
+TYD K+ ++ + LP+ KL+ + IIKK ++ DDE+E+D+D++D T+ L +
Sbjct: 528 VTYDMKRIITERINDLPTSKLERAIDIIKKSMPNI-SEDDEVELDLDTLDNHTILTLYNT 586
Query: 611 FVTNYKKS 618
F Y+ S
Sbjct: 587 FFRQYESS 594
>gi|327270741|ref|XP_003220147.1| PREDICTED: bromodomain testis-specific protein-like [Anolis
carolinensis]
Length = 900
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 61/107 (57%), Gaps = 3/107 (2%)
Query: 372 FKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
K C+ +L ++ +H W+F P+DV GL DY +++ PMDLGT+K ++ N YK
Sbjct: 318 LKYCNEILTEMFSKQHEAYAWLFYKPIDVTAPGLEDYNDVVKCPMDLGTIKKKMENNAYK 377
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
+EFA D+RL F N Y+ Q+V MA +L +FE + I E
Sbjct: 378 DTQEFAADIRLMFMNCYRYSSPDQEVVTMARKLQDVFEMHFAKIPDE 424
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 71/143 (49%), Gaps = 9/143 (6%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
+++ + +H W F+ PVD L L DY+ II++PMDL T++ RL N+Y E E+
Sbjct: 81 VVMKAMWRHSFSWPFHQPVDAAGLKLPDYYNIIKNPMDLTTIQKRLEHNYYTCAAECIEN 140
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIF---------EDKWVVIESEYNREMRIGADYE 487
+ F N YN G D+ MA++L K+F E+K +VI + +
Sbjct: 141 FKTMFANCYLYNKPGDDIVFMAQELEKVFMQKIAQMPLEEKIIVINQGKRKRKTTEVAEQ 200
Query: 488 MGFHTPTSRKAPPLPPPLDMRRI 510
P ++++ P PP +R+
Sbjct: 201 SDASIPQAKQSQPPKPPRKVRQF 223
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSL-FQHDDEIEVDIDSVDAETLWEL 608
+ M+YDEK++LS ++ LP E+L +V II+ R SL + EIE+D +++ A TL EL
Sbjct: 553 KPMSYDEKRQLSLDINKLPGERLGRVVHIIQSREPSLGHSNPGEIEIDFETLKASTLREL 612
Query: 609 DRFV 612
+++V
Sbjct: 613 EKYV 616
>gi|448085671|ref|XP_004195918.1| Piso0_005345 [Millerozyma farinosa CBS 7064]
gi|359377340|emb|CCE85723.1| Piso0_005345 [Millerozyma farinosa CBS 7064]
Length = 637
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 61/101 (60%), Gaps = 3/101 (2%)
Query: 372 FKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
+ C+ L++L KH + F PVD L + +Y II+ PMDL TV+++L N Y+
Sbjct: 312 LRFCNQTLKELTSKKHYSYSFPFLTPVDAVALNIPNYHEIIKEPMDLSTVQSKLANNQYE 371
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKW 469
+ EF DVRL F N T+NP+G DV++M +L +F+ KW
Sbjct: 372 NGDEFEHDVRLIFKNCYTFNPEGTDVNMMGHRLESVFDKKW 412
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 40/82 (48%)
Query: 391 FNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPK 450
F PVD L + Y+ I+ PMDL T++ ++ N Y+ P + +D L N + +N +
Sbjct: 168 FLHPVDTVKLNVPLYYNYIKRPMDLSTIERKIAVNAYEDPSQVVDDFNLMVSNCIKFNGE 227
Query: 451 GQDVHIMAEQLLKIFEDKWVVI 472
+ MA+ FE + I
Sbjct: 228 NSGISKMAKNTQAHFEKHMLNI 249
>gi|323448819|gb|EGB04713.1| hypothetical protein AURANDRAFT_17164, partial [Aureococcus
anophagefferens]
Length = 88
Score = 90.1 bits (222), Expect = 4e-15, Method: Composition-based stats.
Identities = 43/88 (48%), Positives = 57/88 (64%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+L+KL+ H+ W+F PVD L L DYF II++PMDLG++K R+ N YK EF DV
Sbjct: 1 VLKKLIDHECSWIFMQPVDPVELNLPDYFEIIKNPMDLGSIKKRMENNGYKLIAEFGADV 60
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIF 465
RLTF NA++YN G DV +A + F
Sbjct: 61 RLTFDNAISYNGNGSDVCKVARDMKSTF 88
>gi|440300943|gb|ELP93390.1| bromodomain containing protein, putative [Entamoeba invadens IP1]
Length = 1251
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/114 (41%), Positives = 63/114 (55%), Gaps = 4/114 (3%)
Query: 356 QAGNELAHGFGTGSKIFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDL 415
Q EL H +K C +L ++K F VD + DYFTI++ PMDL
Sbjct: 972 QNYQELYHMSDDMAK----CFPILNSIIKLNKSEPFRTAVDPIYYDVLDYFTIVKDPMDL 1027
Query: 416 GTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKW 469
TV+ +L YK+ KEFA+D+ L F NAM YN K +H AE+LLK+FED +
Sbjct: 1028 YTVRKKLMNGAYKNRKEFAKDMVLVFENAMNYNEKKTPIHQDAEELLKVFEDLY 1081
>gi|301118124|ref|XP_002906790.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262108139|gb|EEY66191.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 218
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 63/96 (65%)
Query: 373 KSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKE 432
K C+ ++E K + F V+ + GL+DY +++ PMDLGT++++L+KN +K P E
Sbjct: 7 KKCTDVVEHFFKLESCEPFRERVNWEEWGLYDYLQVVKEPMDLGTIRSKLSKNEHKKPAE 66
Query: 433 FAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
FA D+RL + N YN G D++++A++L K FED+
Sbjct: 67 FARDMRLVWSNCKLYNQDGSDLYLLADELAKKFEDR 102
>gi|134105292|pdb|2OO1|A Chain A, Crystal Structure Of The Bromo Domain 2 Of Human
Bromodomain Containing Protein 3 (Brd3)
gi|134105293|pdb|2OO1|B Chain B, Crystal Structure Of The Bromo Domain 2 Of Human
Bromodomain Containing Protein 3 (Brd3)
gi|134105294|pdb|2OO1|C Chain C, Crystal Structure Of The Bromo Domain 2 Of Human
Bromodomain Containing Protein 3 (Brd3)
gi|134105295|pdb|2OO1|D Chain D, Crystal Structure Of The Bromo Domain 2 Of Human
Bromodomain Containing Protein 3 (Brd3)
gi|340708300|pdb|3S92|A Chain A, Crystal Structure Of The Second Bromodomain Of Human Brd3
In Complex With The Inhibitor Jq1
Length = 113
Score = 90.1 bits (222), Expect = 4e-15, Method: Composition-based stats.
Identities = 44/104 (42%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G S+ + C ++L +++ KH W F PVD + L LHDY II+HPMDL TVK ++
Sbjct: 3 GKLSEHLRYCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKM 62
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFE 466
+ Y + FA DVRL F N YNP +V MA +L +FE
Sbjct: 63 DGREYPDAQGFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFE 106
>gi|159164343|pdb|2E7N|A Chain A, Solution Structure Of The Second Bromodomain From Human
Bromodomain-Containing Protein 3
Length = 117
Score = 90.1 bits (222), Expect = 4e-15, Method: Composition-based stats.
Identities = 43/101 (42%), Positives = 59/101 (58%), Gaps = 3/101 (2%)
Query: 369 SKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN 425
S+ + C ++L +++ KH W F PVD + L LHDY II+HPMDL TVK +++
Sbjct: 11 SEHLRYCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDGR 70
Query: 426 WYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFE 466
Y + FA DVRL F N YNP +V MA +L +FE
Sbjct: 71 EYPDAQGFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFE 111
>gi|401624564|gb|EJS42620.1| bdf1p [Saccharomyces arboricola H-6]
Length = 695
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 71/123 (57%), Gaps = 7/123 (5%)
Query: 372 FKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
K C +++++L+ KH + F PVD ++ L YF ++ PMDLGT+ +LN Y+
Sbjct: 327 MKFCQSIVKELVAKKHASYNYPFLEPVDPVSMNLPTYFEYVKEPMDLGTIAKKLNDWEYQ 386
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWV----VIESEYNREMRIGA 484
+ ++F DVRL F N T+NP G V++M +L ++F KW + E + + ++R
Sbjct: 387 TMEDFERDVRLVFKNCYTFNPDGTIVNMMGHRLEEVFNSKWADRPNLDEYDSDEDLRNQG 446
Query: 485 DYE 487
DY+
Sbjct: 447 DYD 449
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%)
Query: 391 FNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPK 450
F PVD L + YF I+ PMDL T++ +LN Y+ P++ ED + +N++ +N
Sbjct: 182 FLQPVDPVKLDIPFYFNYIKRPMDLSTIERKLNVGAYEVPEQIMEDFNVMVNNSIRFNGP 241
Query: 451 GQDVHIMAEQLLKIFE 466
+ MA + FE
Sbjct: 242 NAGISQMARNIQASFE 257
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWEL-DR 610
+TYD K+ ++ + LP+ KL+ + IIKK ++ DDE+E+D+D++D T+ L +
Sbjct: 537 VTYDMKRIITERINDLPTSKLERAIDIIKKSMPNI-SEDDEVELDLDTLDNHTILTLYNT 595
Query: 611 FVTNYK 616
F Y+
Sbjct: 596 FFRQYE 601
>gi|313226820|emb|CBY21965.1| unnamed protein product [Oikopleura dioica]
Length = 548
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 58/102 (56%), Gaps = 3/102 (2%)
Query: 370 KIFKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNW 426
K + C+A+L +L + +H W F PVDVK L LHDY+ +I+ PMDL + ++ +
Sbjct: 235 KEMRVCAAILRELHQKRHQQYAWPFYVPVDVKGLELHDYYDVIKRPMDLSLAQKNIDNDM 294
Query: 427 YKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
Y EF D+ L F N YNP +V MA +L K+FE K
Sbjct: 295 YNDKNEFIADIMLIFENCRAYNPPDHEVVQMANRLQKVFEAK 336
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 48/91 (52%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+ L HK W F PVD L L DYFTII++PMD+ T+K +L Y+S K+ D
Sbjct: 20 IFMTLWNHKFAWPFQKPVDPVELNLPDYFTIIKNPMDMSTLKKKLYGGQYESAKQCIADY 79
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
L F N YN D+ IM +++ + K
Sbjct: 80 DLMFENCYNYNRPTDDISIMGKKIQDLLHTK 110
>gi|313212448|emb|CBY36425.1| unnamed protein product [Oikopleura dioica]
Length = 548
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 58/102 (56%), Gaps = 3/102 (2%)
Query: 370 KIFKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNW 426
K + C+A+L +L + +H W F PVDVK L LHDY+ +I+ PMDL + ++ +
Sbjct: 235 KEMRVCAAILRELHQKRHQQYAWPFYVPVDVKGLELHDYYDVIKRPMDLSLAQKNIDNDM 294
Query: 427 YKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
Y EF D+ L F N YNP +V MA +L K+FE K
Sbjct: 295 YNDKNEFIADIMLIFENCRAYNPPDHEVVQMANRLQKVFEAK 336
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 48/91 (52%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+ L HK W F PVD L L DYFTII++PMD+ T+K +L Y+S K+ D
Sbjct: 20 IFMTLWNHKFAWPFQKPVDPVELNLPDYFTIIKNPMDMSTLKKKLYSGQYESAKQCIADY 79
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
L F N YN D+ IM +++ + K
Sbjct: 80 DLMFENCYNYNRPTDDISIMGKKIQDLLHTK 110
>gi|320170046|gb|EFW46945.1| E1A binding protein p300 [Capsaspora owczarzaki ATCC 30864]
Length = 2072
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 61/95 (64%), Gaps = 4/95 (4%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLN----KNWYKSPKEF 433
+ E+L + ++ F PVD LG+ DY T+I+ PMD T++TRL+ K++Y+ P F
Sbjct: 895 IFEELCRDENAGPFMVPVDPVALGILDYLTVIKRPMDFSTIRTRLDRPTDKHFYRDPLGF 954
Query: 434 AEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
+D+RL F NA+TYN K VH MA +L +FE++
Sbjct: 955 VDDMRLVFTNALTYNKKNSRVHKMATKLSDLFENR 989
>gi|194388908|dbj|BAG61471.1| unnamed protein product [Homo sapiens]
Length = 405
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 52/89 (58%)
Query: 387 HGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMT 446
+ W F PVD + L LHDY II+HPMDL TVK +++ Y + FA DVRL F N
Sbjct: 9 YAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDGREYPDAQGFAADVRLMFSNCYK 68
Query: 447 YNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
YNP +V MA +L +FE ++ + E
Sbjct: 69 YNPPDHEVVAMARKLQDVFEMRFAKMPDE 97
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 70/128 (54%), Gaps = 15/128 (11%)
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWELDR 610
M+YDEK++LS ++ LP EKL +V II+ R SL + DEIE+D +++ TL EL+R
Sbjct: 251 MSYDEKRQLSLDINRLPGEKLGRVVHIIQSREPSLRDSNPDEIEIDFETLKPTTLRELER 310
Query: 611 FVTNYKKSLSKNKRKAELANQARAVAQQNVQQQTPAPVVTEVRKEI--RTDDRIGSTSS- 667
+V K L K +RK A+ + A+ + + E +KE+ R D G SS
Sbjct: 311 YV---KSCLQKKQRKPFSASGKKQAAKSKEE------LAQEKKKELEKRLQDVSGQLSSS 361
Query: 668 --PVQVEK 673
P + EK
Sbjct: 362 KKPARKEK 369
>gi|402087403|gb|EJT82301.1| hypothetical protein GGTG_02275 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 951
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 57/104 (54%), Gaps = 3/104 (2%)
Query: 372 FKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
+ C +L++LMK KH W F PVD G H YFT+I PMDLGT++T+LN Y
Sbjct: 521 LRFCEDVLKELMKPKHQAINWPFLNPVDEVRDGAHGYFTMITDPMDLGTIQTKLNTGKYA 580
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVI 472
+ + F D L N +NP G +V+ + + L F KWV I
Sbjct: 581 NAEGFRHDFNLMLDNCFIFNPAGTEVNNVGKNLQSWFNGKWVDI 624
>gi|320582812|gb|EFW97029.1| hypothetical protein HPODL_1739 [Ogataea parapolymorpha DL-1]
Length = 894
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 61/101 (60%), Gaps = 3/101 (2%)
Query: 372 FKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
+ C ++++LM K+ + F APVD L YF +++ PMDLGT+ ++L Y+
Sbjct: 579 LRFCQQVIKELMSKKYDSISYPFLAPVDPVALDCPTYFDVVKEPMDLGTIHSKLQNGEYE 638
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKW 469
+ EF +DVRL FHN +NP+G V+IM +L +F +KW
Sbjct: 639 NADEFEKDVRLVFHNCYLFNPEGTAVNIMGHRLESVFNEKW 679
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 42/76 (55%)
Query: 391 FNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPK 450
F PVD L + Y+ I+ PMDL T++ +LN + Y++P++ ED L N +T+N K
Sbjct: 430 FLTPVDTVKLNIPFYYNFIKRPMDLSTIERKLNVDAYETPEQVMEDFNLMVDNCITFNGK 489
Query: 451 GQDVHIMAEQLLKIFE 466
+ MA + FE
Sbjct: 490 DSAISQMARNIQASFE 505
Score = 39.3 bits (90), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWELDRF 611
+TY+ K+++S + S+ + L N++ IIK+ L D+EIE+D+D ++ ETL +L +
Sbjct: 778 VTYEMKKEISEAMGSINEKMLKNVIAIIKEGIPDL-ADDEEIELDMDQLNNETLLKLYNY 836
Query: 612 VT 613
+
Sbjct: 837 IV 838
>gi|159794742|pdb|2DWW|A Chain A, Crystal Structure Of Bromodomain-Containing Protein 4
Length = 114
Score = 89.4 bits (220), Expect = 6e-15, Method: Composition-based stats.
Identities = 44/104 (42%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
Query: 369 SKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN 425
S+ K CS +L++ KH W F PVDV+ LGLHDY II+HP D T+K++L
Sbjct: 6 SEQLKCCSGILKEXFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPXDXSTIKSKLESR 65
Query: 426 WYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKW 469
Y+ +EF DVRL F N YNP +V A +L +FE ++
Sbjct: 66 EYRDAQEFGADVRLXFSNCYKYNPPDHEVVAXARKLQDVFEXRF 109
>gi|147833163|emb|CAN77592.1| hypothetical protein VITISV_020474 [Vitis vinifera]
Length = 346
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 110/264 (41%), Gaps = 57/264 (21%)
Query: 359 NELAHGFGTGSKIFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTV 418
EL FGT +L ++ +HK W F PVDV+ LGLHDY+
Sbjct: 76 QELMRQFGT----------ILRQITQHKWAWPFMQPVDVEGLGLHDYY------------ 113
Query: 419 KTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVI------ 472
+ R+ + S + DVRL F NAM YN + +DVH+MA+ LL FE+KW+ +
Sbjct: 114 EQRMVPDIRMSGR-ICADVRLVFKNAMKYNDERRDVHVMAKTLLGKFEEKWLQLLPKVAE 172
Query: 473 --ESEYNREMRIGADYEMGFHTPTSRKAPPLPPPLDMRRILDRSESITHPMDSRLKPIST 530
+ E D + ++ A + L + +D L I
Sbjct: 173 EDKRREEEEAEAQLDMHLAQEAAHAKMARDISNEL-------------YEIDMHLDDIRE 219
Query: 531 TPSSRTPAPKKPKAKDPHKRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD 590
+ R + +EK+KL L L +E L ++I+ + N S
Sbjct: 220 MIVQKC-------------RKTSTEEKRKLGAALSRLSAEDLSKALEIVAQSNPSFQATA 266
Query: 591 DEIEVDIDSVDAETLWELDRFVTN 614
+E+ +DID+ TLW L FV +
Sbjct: 267 EEVHLDIDAQRESTLWRLKFFVKD 290
>gi|365991080|ref|XP_003672369.1| hypothetical protein NDAI_0J02340 [Naumovozyma dairenensis CBS 421]
gi|343771144|emb|CCD27126.1| hypothetical protein NDAI_0J02340 [Naumovozyma dairenensis CBS 421]
Length = 733
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 61/102 (59%), Gaps = 5/102 (4%)
Query: 372 FKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNW-Y 427
K C ++L++L KH + F PVD L L Y+ ++ PMDLGT+ +LN NW Y
Sbjct: 358 MKFCQSILKELTNKKHASFNYPFLEPVDPVALNLPTYYDYVKEPMDLGTISKKLN-NWEY 416
Query: 428 KSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKW 469
++ +F +DVRL F N +NP G V++M +L ++F +KW
Sbjct: 417 ETMDQFGDDVRLVFKNCYAFNPDGTIVNMMGHRLEEVFNNKW 458
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 40/76 (52%)
Query: 391 FNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPK 450
F PVD+ L + Y+ + PMDL T++ +LN N Y P++ +D L +N++ +N
Sbjct: 204 FLKPVDIVALNIPFYYNYVPRPMDLSTIEKKLNVNAYSEPEQITDDFNLMVNNSIKFNGP 263
Query: 451 GQDVHIMAEQLLKIFE 466
+ MA + FE
Sbjct: 264 TAVISQMARNIQAAFE 279
>gi|194756116|ref|XP_001960325.1| GF13298 [Drosophila ananassae]
gi|190621623|gb|EDV37147.1| GF13298 [Drosophila ananassae]
Length = 253
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 63/99 (63%), Gaps = 3/99 (3%)
Query: 374 SCSALLEKLMK--HKH-GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSP 430
+C A++++L +KH W+F P+D + L L+DY +++ PMDL TV+ R+N Y+S
Sbjct: 12 ACKAIIKRLFANSYKHLAWIFYEPLDAQLLALYDYHEVVKEPMDLSTVRHRVNSGCYQSA 71
Query: 431 KEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKW 469
+FA+DVRL F+N Y G + MA++L +FE+ +
Sbjct: 72 ADFAKDVRLIFYNTYLYTKPGHLCYEMAKKLQIVFEEMF 110
>gi|10441758|gb|AAG17179.1|AF191032_1 RING3, partial [Myxine glutinosa]
Length = 732
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 59/107 (55%), Gaps = 3/107 (2%)
Query: 372 FKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
+ C +L+++ KH W F VD LGLHDY II+ PMDL T+K + + Y
Sbjct: 410 LRHCQTILKEIFTKKHAAYAWPFYKAVDAFALGLHDYHDIIKIPMDLTTIKEKFERREYT 469
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
+ EFA+D+RL F N YNP +V MA +L +FE ++ + E
Sbjct: 470 NLHEFADDMRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKVPDE 516
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 52/92 (56%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
+++ L KH+ W F+ PVD L L DY+ II++P+D+ T+K RL N+Y + E +D
Sbjct: 41 VVMKVLWKHQFAWPFHHPVDAAKLNLPDYYQIIKNPLDMLTIKKRLESNYYWTAVECIQD 100
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN D+ +MA+ + K F K
Sbjct: 101 FSTMFTNCYIYNRPNDDIVLMAQTVEKAFLQK 132
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETL 605
R MTYDEK++LS ++ LP +KL +V II+ R SL + + DEIE+D +++ TL
Sbjct: 675 RPMTYDEKRQLSLDINRLPGDKLGFVVNIIQSREPSLSESNPDEIEIDFETLKPSTL 731
>gi|254579016|ref|XP_002495494.1| ZYRO0B12672p [Zygosaccharomyces rouxii]
gi|238938384|emb|CAR26561.1| ZYRO0B12672p [Zygosaccharomyces rouxii]
Length = 701
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 65/111 (58%), Gaps = 8/111 (7%)
Query: 372 FKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNW-Y 427
K C ++ +L+ K+ + F PVD L YF ++ PMDLGTV ++LN NW Y
Sbjct: 311 MKFCQQVVRELISKKYASFNYPFLEPVDPVALNCPTYFDYVKEPMDLGTVSSKLN-NWKY 369
Query: 428 KSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWV---VIESE 475
+S +EF DVRL F N T+NP+G V++M +L +F KW +IES+
Sbjct: 370 QSMEEFENDVRLVFRNCYTFNPEGTIVNMMGHRLEDVFNSKWADRPIIESD 420
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 41/76 (53%)
Query: 391 FNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPK 450
F PV+ L + YF I+ PMDL T++ +LN N +++P++ +D L +N + +N
Sbjct: 163 FLKPVNPVALNVPFYFNYIKRPMDLSTIERKLNVNAFETPEQVQDDFNLMVNNCVKFNGP 222
Query: 451 GQDVHIMAEQLLKIFE 466
+ MA + FE
Sbjct: 223 QAVISQMARNIQASFE 238
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWEL 608
+TYD K+ ++ ++ LP+ KL+ ++ II KR+ + D+E+E+D+D++D T+ L
Sbjct: 537 VTYDMKRIITEHINDLPANKLEKVIGII-KRSMPQLREDEEVELDLDTLDNNTILTL 592
>gi|363736907|ref|XP_003641771.1| PREDICTED: LOW QUALITY PROTEIN: bromodomain testis-specific protein
[Gallus gallus]
Length = 995
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 53/91 (58%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ + +H W F+ PVD L L DY++II+ PMDL T+K RL N+Y E +D
Sbjct: 39 VMKAMWRHNFSWPFHQPVDAAALNLPDYYSIIKKPMDLSTIKKRLEHNYYTKSAECIDDF 98
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
+ F N YN G D+ MA++L K+F K
Sbjct: 99 KTMFLNCYIYNKPGDDIVFMAQELEKVFMQK 129
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 55/110 (50%), Gaps = 3/110 (2%)
Query: 369 SKIFKSCSALLEKLMKHKHGWV---FNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN 425
SK K C +L+++ KH F DV + L + I + P DLGT+K +++
Sbjct: 281 SKQLKYCKEILKEMFSKKHSAYARPFLRSADVVSFSLGEKKGITKCPTDLGTIKKKMDNF 340
Query: 426 WYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
Y+ +EFA DVRL F N N +V MA++L +FE + I E
Sbjct: 341 EYRDIQEFATDVRLMFMNCYKRNSPDHEVVAMAKKLQDVFETHFAKIPDE 390
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 47/77 (61%), Gaps = 4/77 (5%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWEL 608
+ M YDEK++LS ++ LP +KL +V II+ R SL DEIE+D +++ A TL EL
Sbjct: 521 KPMNYDEKRQLSLSINKLPGDKLGKVVHIIQSREPSLRNSSPDEIEIDFETLKASTLREL 580
Query: 609 DRFVTNYKKSLSKNKRK 625
+++V L K RK
Sbjct: 581 EKYVAT---CLRKRPRK 594
>gi|223993693|ref|XP_002286530.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220977845|gb|EED96171.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 215
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 60/95 (63%)
Query: 391 FNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPK 450
F PVD K LGL DY +++ PMDLG VK +LN++ YKS + A+DVRL + N MTYN
Sbjct: 24 FREPVDYKALGLVDYPLVVKKPMDLGQVKKKLNESKYKSIHDAADDVRLIWKNCMTYNAD 83
Query: 451 GQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGAD 485
G D +++A+ + K FE+K+ + ++ G D
Sbjct: 84 GSDFYLLAQTMAKKFEEKFAKLVEQFGEAAGDGGD 118
>gi|170284622|gb|AAI61214.1| Unknown (protein for IMAGE:8889270) [Xenopus (Silurana) tropicalis]
Length = 356
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 52/91 (57%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD L L DY II++PMD+GT+K RL N+Y S E +D
Sbjct: 42 VVKTLWKHQFAWPFYQPVDCVKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSANECMQDF 101
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN D+ +MA+ L KIF K
Sbjct: 102 NTMFTNCYIYNKSTDDIVLMAQALEKIFLQK 132
>gi|326936108|ref|XP_003214100.1| PREDICTED: bromodomain-containing protein 2-like, partial
[Meleagris gallopavo]
Length = 601
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 51/91 (56%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD LGL DY II+ PMD+GT+K RL N+Y E +D
Sbjct: 66 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWGAAECMQDF 125
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN D+ +MA+ L KIF K
Sbjct: 126 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 156
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 49/77 (63%), Gaps = 4/77 (5%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLF-QHDDEIEVDIDSVDAETLWEL 608
+ MTYDEK++LS ++ LP EKL +V II+ R SL + +EIE+D +++ TL EL
Sbjct: 483 KPMTYDEKRQLSLDINKLPGEKLGRVVHIIQSREPSLRDSNPEEIEIDFETLKPSTLREL 542
Query: 609 DRFVTNYKKSLSKNKRK 625
+R+V + L K RK
Sbjct: 543 ERYVLS---CLRKKPRK 556
>gi|195149830|ref|XP_002015858.1| GL11280 [Drosophila persimilis]
gi|194109705|gb|EDW31748.1| GL11280 [Drosophila persimilis]
Length = 265
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 89/230 (38%), Gaps = 62/230 (26%)
Query: 374 SCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSP 430
+C A+ KL ++ W+F P+D LGLHDY I++ PMDL +++TRL Y +
Sbjct: 24 ACWAIFIKLFSSQYKKLAWIFYEPIDAPYLGLHDYHKIVKKPMDLNSIRTRLQAGLYVNA 83
Query: 431 KEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEMGF 490
EF DVRL F N Y H MA++L IFE + I S
Sbjct: 84 DEFVRDVRLMFDNTYLYTTPDHLCHQMAKKLQAIFEAMFFEIAST--------------- 128
Query: 491 HTPTSRKAPPLPPPLDMRRILDRSESITHPMDSRLKPISTTPSSRTPAPKKPK------- 543
D S++IT S + PI+T P AP P
Sbjct: 129 ---------------------DSSDTITETDVSSMFPIATIPD----APINPHKDGGVKM 163
Query: 544 ------------AKDPHKRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKK 581
A + R T E L LQ L E L ++ IIK+
Sbjct: 164 TRARRQQLQSRSANEAAVRPWTAKENNHLGDRLQELKGEVLHRVIHIIKE 213
>gi|321466371|gb|EFX77367.1| hypothetical protein DAPPUDRAFT_27648 [Daphnia pulex]
Length = 106
Score = 88.2 bits (217), Expect = 1e-14, Method: Composition-based stats.
Identities = 44/91 (48%), Positives = 53/91 (58%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+L L HK+ W F+ PVD GL DYF +I+ PMDLGTVK RL N+Y S + D+
Sbjct: 15 VLLALWNHKYAWPFHEPVDTIKHGLTDYFKVIKFPMDLGTVKKRLQNNYYWSATDCIRDI 74
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N TYN QDV M +QL KIF K
Sbjct: 75 NNIFDNCYTYNDPSQDVVKMGQQLGKIFLRK 105
>gi|358340347|dbj|GAA29956.2| bromodomain-containing protein 3 [Clonorchis sinensis]
Length = 1466
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 60/102 (58%), Gaps = 3/102 (2%)
Query: 369 SKIFKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN 425
S K CS +L ++ +++ F PVD +++GLHDY I++ PMDL TVK +L+
Sbjct: 1115 SAALKQCSNILSEISSYRYKELNHFFIKPVDARSMGLHDYHNIVKKPMDLHTVKVKLDSG 1174
Query: 426 WYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFED 467
Y + +FAEDVRL F N YN + DV + + L IFED
Sbjct: 1175 QYHTRSDFAEDVRLIFTNCYKYNGESSDVGKIGKVLSGIFED 1216
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 63/107 (58%), Gaps = 3/107 (2%)
Query: 369 SKIFKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN 425
S+ K+CS +L+ + ++ +F PVD + +GLHDY +++ MDL TVKT+L
Sbjct: 174 SEALKACSNILKDISSQRYRDLNHLFLKPVDAEAMGLHDYHDVVKKAMDLSTVKTKLETG 233
Query: 426 WYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVI 472
Y S EFA+D+RL F+N YN + DV + + L IFE+ + +
Sbjct: 234 QYHSKYEFADDIRLMFNNCYKYNGEDSDVAKVGKLLQAIFEESFAKV 280
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 50/84 (59%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
++ +L+K K+ W F VD + L L DY I++HPMDLGT+K RLN +Y S E +D+
Sbjct: 920 VINRLLKEKYVWPFTRLVDHERLNLPDYPKIVKHPMDLGTIKQRLNLKFYHSSVECFDDL 979
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQL 461
F N +N G D+ MA +L
Sbjct: 980 FTMFRNCYIFNKPGDDIVGMAVKL 1003
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWEL 608
R MTYDEK++LS ++ LP EKL +VQII++R S + DEIE+D +++ TL EL
Sbjct: 431 RPMTYDEKRQLSIDINKLPGEKLGRVVQIIQQREPSHRDCNPDEIEIDFETLQHTTLREL 490
Query: 609 DRFV 612
+++V
Sbjct: 491 EKYV 494
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWELDR 610
MTYDEK++LS ++ LP EKL ++QII++ S + DEIE+D +++ TL EL++
Sbjct: 1313 MTYDEKRQLSLDINKLPGEKLGQVIQIIQQHEPSHRDCNPDEIELDFETLQHTTLRELEQ 1372
Query: 611 FVTNYKKSLSKNKRKA 626
+V ++ + RK
Sbjct: 1373 YVKAVLRNAKMSSRKV 1388
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%)
Query: 413 MDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKW 469
MDLGT+K RLN +Y S E +D+ F N +N G DV MA +L ++ ++
Sbjct: 1 MDLGTIKQRLNLKFYHSSSECLDDLFTMFRNCYIFNKPGDDVVAMAMKLEQLARERL 57
>gi|195585984|ref|XP_002082758.1| GD25062 [Drosophila simulans]
gi|194194767|gb|EDX08343.1| GD25062 [Drosophila simulans]
Length = 271
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 63/104 (60%), Gaps = 5/104 (4%)
Query: 374 SCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSP 430
+C ++++L + + WVF P+D + LGLHDY I++ PMDL TV+ RLN Y +
Sbjct: 16 ACKVIMKRLFSNTYKNIAWVFYEPLDPQLLGLHDYHEIVQEPMDLSTVRHRLNTGCYLNA 75
Query: 431 KEFAEDVRLTFHNAMTY-NPKGQDVHIMAEQLLKIFEDKWVVIE 473
+FA D+RL F+N Y NP H MA+QL IFED + ++
Sbjct: 76 VDFANDIRLIFYNTYLYTNPDHLCYH-MAKQLQIIFEDMFAHVQ 118
>gi|444524033|gb|ELV13688.1| Epoxide hydrolase 3 [Tupaia chinensis]
Length = 941
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 54/92 (58%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
+L+ L KH+ W F PVD L L DY+ II+ PMD+GT+K RL N+Y + +E +D
Sbjct: 69 VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKSPMDMGTIKKRLENNYYWNAQECIQD 128
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN G D+ +MAE L K+F K
Sbjct: 129 FNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 59/99 (59%), Gaps = 12/99 (12%)
Query: 537 PAP---KKPKAKDPHKRD----MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLF-Q 588
PAP K P A + + D M+Y+EK++LS ++ LP EKL +V II+ R SL
Sbjct: 381 PAPMKSKPPPAYESEEEDKCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNS 440
Query: 589 HDDEIEVDIDSVDAETLWELDRFVTNYKKSLSKNKRKAE 627
+ DEIE+D +++ TL EL+R+VT S + KRK +
Sbjct: 441 NPDEIEIDFETLKPSTLRELERYVT----SCLRKKRKPQ 475
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%)
Query: 418 VKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
VK++L Y+ +EF DVRL F N YNP +V MA +L +FE ++ + E
Sbjct: 205 VKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE 262
>gi|195347028|ref|XP_002040056.1| GM15561 [Drosophila sechellia]
gi|194135405|gb|EDW56921.1| GM15561 [Drosophila sechellia]
Length = 267
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 62/100 (62%), Gaps = 5/100 (5%)
Query: 374 SCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSP 430
+C ++++L + + WVF P+D + LGLHDY I++ PMDL TV+ RLN Y +
Sbjct: 16 ACKVIMKRLFSNTYKNIAWVFYEPLDPQLLGLHDYHEIVQEPMDLSTVRHRLNTGCYLNA 75
Query: 431 KEFAEDVRLTFHNAMTY-NPKGQDVHIMAEQLLKIFEDKW 469
+FA+D+RL F+N Y NP H MA+QL IFED +
Sbjct: 76 VDFAKDIRLIFYNTYLYTNPDHLCYH-MAKQLQIIFEDMF 114
>gi|156030778|ref|XP_001584715.1| hypothetical protein SS1G_14328 [Sclerotinia sclerotiorum 1980]
gi|154700719|gb|EDO00458.1| hypothetical protein SS1G_14328 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 931
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 126/312 (40%), Gaps = 65/312 (20%)
Query: 372 FKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
K C L ++ K K+ F PVD L + +YFTII+ PMD+ TV +L Y
Sbjct: 548 LKWCEETLNEMKKSKYLMFSSAFMTPVDPVALQIPNYFTIIKSPMDISTVSEKLQNGAYT 607
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIF------EDKWV------------ 470
KEF +DV+L F N +NP+G V +M +Q ++F +D+W+
Sbjct: 608 RAKEFEQDVKLIFQNCYKFNPEGNPVRVMGQQFEEVFNGLLAKKDRWIADHQPVAVTPDR 667
Query: 471 -------------------VIESEYNREMRIGADYEMGFHT-PTSRKAPPLPPPLDMRRI 510
+ +S + I + + P S A L R+I
Sbjct: 668 DEETEEEEESEDEPEPAQEIFQSAATARLLIEQSKLIDMLSKPESADAIAL-----QRKI 722
Query: 511 LDRSESITHPMDSRLKPISTTPSSRTPAPKKPKAK---------DPHK--------RDMT 553
L+ + I +L I PS ++ P KP K P K R +
Sbjct: 723 LNFIQEIADKEKEKLAAIPKKPSKKS-RPSKPLKKAVTTKKSTTGPSKKSGGARKERYLG 781
Query: 554 YDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSL-FQHDDEIEVDIDSVDAETLWELDRFV 612
EK+ +S + LP ++++++K + S+ + D +E++ID ++ LW + +
Sbjct: 782 TFEKEVISAGIGLLPDHITADVMEMVKSAHPSMVIEEDGTLEMEIDQLEPHLLWRIFDAI 841
Query: 613 TNYKKSLSKNKR 624
+ N R
Sbjct: 842 HEHAPECEANIR 853
>gi|120431733|ref|NP_001073342.1| bromodomain testis-specific protein isoform B [Mus musculus]
Length = 326
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 51/92 (55%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
+L+ L KH W F PVD L L DY+TII+ PMDL T+K RL +Y+ E ED
Sbjct: 37 VVLKALWKHGFSWPFQQPVDAVKLKLPDYYTIIKTPMDLNTIKKRLENKYYEKASECIED 96
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN G D+ +MA+ L K+F K
Sbjct: 97 FNTMFSNCYLYNKTGDDIVVMAQALEKLFMQK 128
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 35/52 (67%), Gaps = 3/52 (5%)
Query: 372 FKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKT 420
K CS +L++++ KH W F PVD LGLH+Y+ ++++PMDLGT+K
Sbjct: 272 LKHCSEILKEMLAKKHLPYAWPFYNPVDADALGLHNYYDVVKNPMDLGTIKV 323
>gi|340505568|gb|EGR31885.1| hypothetical protein IMG5_100340 [Ichthyophthirius multifiliis]
Length = 475
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 49/71 (69%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+L+ + K K ++F PVDV +HDY+ I++ PMDLGT+K +LN N Y+S KEF EDV
Sbjct: 385 ILQIISKAKGCYLFQQPVDVVKYQIHDYYDIVKRPMDLGTIKNKLNCNVYESCKEFIEDV 444
Query: 438 RLTFHNAMTYN 448
L F+N + YN
Sbjct: 445 ELVFYNCILYN 455
>gi|330812863|ref|XP_003291336.1| hypothetical protein DICPUDRAFT_98971 [Dictyostelium purpureum]
gi|325078478|gb|EGC32127.1| hypothetical protein DICPUDRAFT_98971 [Dictyostelium purpureum]
Length = 564
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 61/96 (63%)
Query: 375 CSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFA 434
C +L ++ K K + F PVD + + DYF II++PMD+ T+ ++L+ Y + K+FA
Sbjct: 330 CKTILSQIFKKKISYAFQRPVDPELENIPDYFDIIKNPMDISTIDSKLDNEKYGTIKDFA 389
Query: 435 EDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWV 470
DVRL F NA+TYN + V+ A+QLL F++ ++
Sbjct: 390 ADVRLMFENALTYNAEISPVYKYAKQLLTYFDNSFI 425
>gi|62086391|dbj|BAD91553.1| bromodomain-containing protein [Mus musculus]
Length = 326
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 51/92 (55%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
+L+ L KH W F PVD L L DY+TII+ PMDL T+K RL +Y+ E ED
Sbjct: 37 VVLKALWKHGFSWPFQQPVDAVKLKLPDYYTIIKTPMDLNTIKKRLENKYYEKASECIED 96
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN G D+ +MA+ L K+F K
Sbjct: 97 FNTMFSNCYLYNKTGDDIVVMAQALEKLFMQK 128
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 35/52 (67%), Gaps = 3/52 (5%)
Query: 372 FKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKT 420
K CS +L++++ KH W F PVD LGLH+Y+ ++++PMDLGT+K
Sbjct: 272 LKHCSEILKEMLAKKHLPYAWPFYNPVDADALGLHNYYDVVKNPMDLGTIKV 323
>gi|50553560|ref|XP_504191.1| YALI0E20537p [Yarrowia lipolytica]
gi|49650060|emb|CAG79786.1| YALI0E20537p [Yarrowia lipolytica CLIB122]
Length = 653
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 58/101 (57%), Gaps = 3/101 (2%)
Query: 372 FKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
+ C+ +L++L KH + F PVD L YF II+ PMDL TV+ ++N N Y+
Sbjct: 311 LRFCNQVLKELTSKKHEEYSFPFLLPVDPVALNCPSYFKIIKEPMDLSTVQEKMNNNAYE 370
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKW 469
+ EF DVRL F N +NP G V+ M ++L IF+ KW
Sbjct: 371 TADEFESDVRLIFKNCYRFNPDGTPVNKMGKRLEAIFDKKW 411
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 52/96 (54%), Gaps = 4/96 (4%)
Query: 373 KSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKE 432
K ++ L+ + + K F PVD L + YF +I+HPMDLGT++ +LN Y + ++
Sbjct: 127 KYAASSLKAVKRLKDAAPFIHPVDPVKLNIPTYFEVIKHPMDLGTMEKKLNNGEYGTKED 186
Query: 433 FAEDVRLTFHNAMTYNPKGQDVHI--MAEQLLKIFE 466
DV+ N +T+N G D I MA+ L FE
Sbjct: 187 MIADVQRIVDNCLTFN--GADSFISSMAKSLFTSFE 220
>gi|440302274|gb|ELP94596.1| bromodomain containing protein, putative [Entamoeba invadens IP1]
Length = 307
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/93 (46%), Positives = 58/93 (62%)
Query: 375 CSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFA 434
C L+ L K + VF PVD + Y II+ PMD+GTVK +L+KN+Y S ++F
Sbjct: 53 CQRLINDLEKTEGCEVFMEPVDPIQWNIPQYSEIIKTPMDIGTVKVKLHKNFYPSREDFV 112
Query: 435 EDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFED 467
DVRLTF NAMT+NP +H A+ LL +FE+
Sbjct: 113 ADVRLTFQNAMTFNPPDNPIHKNAKFLLAMFEN 145
>gi|66911387|gb|AAH97199.1| LOC100004566 protein [Danio rerio]
Length = 378
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 53/92 (57%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
AL++ L +H W F+ PVD L L DY+ II+ PMD+GT+K RL N+Y+S E +D
Sbjct: 262 ALVKTLWRHHFAWPFHEPVDAAKLNLPDYYNIIKQPMDMGTIKKRLENNYYRSASECMQD 321
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN D+ +MA+ L K F K
Sbjct: 322 FNTMFTNCYIYNKPTDDIVLMAQSLEKAFLQK 353
>gi|299755165|ref|XP_002912074.1| bromodomain-containing protein [Coprinopsis cinerea okayama7#130]
gi|298411098|gb|EFI28580.1| bromodomain-containing protein [Coprinopsis cinerea okayama7#130]
Length = 823
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 58/101 (57%), Gaps = 3/101 (2%)
Query: 372 FKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
FK CS LL L K ++ F PVD + + Y II+ PMD+ T++ +L+ Y
Sbjct: 476 FKFCSKLLNDLFKKQYYNIAHPFYEPVDWVRMEIPSYPKIIKKPMDMSTMRKKLDNGEYA 535
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKW 469
+P++FAED RL N T+NP G V +QL ++FE+KW
Sbjct: 536 TPQKFAEDFRLMLRNCSTFNPVGTPVCTAGQQLGRVFEEKW 576
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 54/107 (50%), Gaps = 12/107 (11%)
Query: 372 FKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN------ 425
+K C + + L K K F PVD L + Y +II+HPMD T++ +LN +
Sbjct: 274 WKYCGSCIRSLKKLKDSIPFLKPVDPVQLNIPHYPSIIKHPMDFSTIERKLNSSNPVKPD 333
Query: 426 ------WYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFE 466
Y + ++F DVRL F N +T+N V M +++ ++F+
Sbjct: 334 PNPDNPRYLTVEDFVSDVRLVFTNCLTFNGPDHVVTQMGKRVEQVFD 380
>gi|349577009|dbj|GAA22178.1| K7_Bdf2p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 638
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 66/108 (61%), Gaps = 5/108 (4%)
Query: 367 TGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLN 423
T K F++C +L+ LM K+ + F PVD L L +YF ++++PMDLGT+ L
Sbjct: 318 TLQKKFRTCLKILKVLMSKKNSDINFPFLQPVDPIALNLPNYFDVVKNPMDLGTISNNL- 376
Query: 424 KNW-YKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWV 470
NW YK+ +F +D+ L F+N +NP+G +VH M ++L ++F W+
Sbjct: 377 MNWKYKTIDQFVDDLNLVFYNCFQFNPEGNEVHSMGKKLKELFNFHWL 424
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%)
Query: 391 FNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPK 450
F PVD L + YF ++ PMDL ++T+L N Y S ++ D + N + +N
Sbjct: 158 FLKPVDPIALNIPHYFNYVQTPMDLSLIETKLQGNVYHSVEQVTSDFKTMVDNCLNFNGP 217
Query: 451 GQDVHIMAEQLLKIFEDK 468
+ MA+++ K FE K
Sbjct: 218 ESSISSMAKRIQKYFEKK 235
>gi|256274113|gb|EEU09024.1| Bdf2p [Saccharomyces cerevisiae JAY291]
Length = 638
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 66/108 (61%), Gaps = 5/108 (4%)
Query: 367 TGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLN 423
T K F++C +L+ LM K+ + F PVD L L +YF ++++PMDLGT+ L
Sbjct: 318 TLQKKFRTCLKILKVLMSKKNSDINFPFLQPVDPIALNLPNYFDVVKNPMDLGTISNNL- 376
Query: 424 KNW-YKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWV 470
NW YK+ +F +D+ L F+N +NP+G +VH M ++L ++F W+
Sbjct: 377 MNWKYKTIDQFVDDLNLVFYNCFQFNPEGNEVHSMGKKLKELFNFHWL 424
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%)
Query: 391 FNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPK 450
F PVD L + YF ++ PMDL ++T+L N Y S ++ D + N + +N
Sbjct: 158 FLKPVDPIALNIPHYFNYVQTPMDLSLIETKLQGNVYHSVEQVTSDFKTMVDNCLNFNGP 217
Query: 451 GQDVHIMAEQLLKIFEDK 468
+ MA+++ K FE K
Sbjct: 218 ESSISSMAKRIQKYFEKK 235
>gi|326925069|ref|XP_003208744.1| PREDICTED: bromodomain testis-specific protein-like [Meleagris
gallopavo]
Length = 824
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 52/92 (56%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
++ + +H W F+ PVD L L DY++II+ PMDL T+K RL N+Y E +D
Sbjct: 38 VVMRAMWRHNFSWPFHQPVDAAALNLPDYYSIIKKPMDLSTIKKRLEHNYYTKAAECIDD 97
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
+ F N YN G D+ MA++L K+F K
Sbjct: 98 FKTMFLNCYIYNKPGDDIVFMAQELEKVFMQK 129
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 58/110 (52%), Gaps = 3/110 (2%)
Query: 369 SKIFKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN 425
SK K C+ +L+++ KH W F DV + L + I + P DLGT+K +++
Sbjct: 281 SKQLKYCNEILKEMFSKKHSAYAWPFLKSADVVSFSLGEKKGITKCPADLGTIKKKMDNF 340
Query: 426 WYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
Y+ +EFA DVRL F N +N +V MA++L +FE + I E
Sbjct: 341 EYRDIQEFATDVRLMFMNCYKHNSPDHEVVAMAKKLQDVFETHFAKIPDE 390
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 47/75 (62%), Gaps = 4/75 (5%)
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWELDR 610
MTYDEK++LS N+ LP +KL +V II+ R SL DEIE+D +++ A TL EL++
Sbjct: 538 MTYDEKRQLSLNINKLPGDKLGKVVHIIQSREPSLRNSSPDEIEIDFETLKASTLRELEK 597
Query: 611 FVTNYKKSLSKNKRK 625
+V L K RK
Sbjct: 598 YVAT---CLRKRPRK 609
>gi|259145174|emb|CAY78438.1| Bdf2p [Saccharomyces cerevisiae EC1118]
Length = 638
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 66/108 (61%), Gaps = 5/108 (4%)
Query: 367 TGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLN 423
T K F++C +L+ LM K+ + F PVD L L +YF ++++PMDLGT+ L
Sbjct: 318 TLQKKFRTCLKILKVLMSKKNSDINFPFLQPVDPIALNLPNYFDVVKNPMDLGTISNNL- 376
Query: 424 KNW-YKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWV 470
NW YK+ +F +D+ L F+N +NP+G +VH M ++L ++F W+
Sbjct: 377 MNWKYKTIDQFVDDLNLVFYNCFQFNPEGNEVHSMGKKLKELFNFHWL 424
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%)
Query: 391 FNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPK 450
F PVD L + YF ++ PMDL ++T+L N Y S ++ D + N + +N
Sbjct: 158 FLKPVDPIALNIPHYFNYVQTPMDLSLIETKLQGNVYHSVEQVTSDFKTMVDNCLNFNGP 217
Query: 451 GQDVHIMAEQLLKIFEDK 468
+ MA+++ K FE K
Sbjct: 218 ESSISSMAKRIQKYFEKK 235
>gi|190405078|gb|EDV08345.1| hypothetical protein SCRG_00567 [Saccharomyces cerevisiae RM11-1a]
Length = 643
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 66/108 (61%), Gaps = 5/108 (4%)
Query: 367 TGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLN 423
T K F++C +L+ LM K+ + F PVD L L +YF ++++PMDLGT+ L
Sbjct: 323 TLQKKFRTCLKILKVLMSKKNSDINFPFLQPVDPIALNLPNYFDVVKNPMDLGTISNNL- 381
Query: 424 KNW-YKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWV 470
NW YK+ +F +D+ L F+N +NP+G +VH M ++L ++F W+
Sbjct: 382 MNWKYKTIDQFVDDLNLVFYNCFQFNPEGNEVHSMGKKLKELFNFHWL 429
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%)
Query: 391 FNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPK 450
F PVD L + YF ++ PMDL ++T+L N Y S ++ D + N + +N
Sbjct: 163 FLKPVDPIALNIPHYFNYVQTPMDLSLIETKLQGNVYHSVEQVTSDFKTMVDNCLNFNGP 222
Query: 451 GQDVHIMAEQLLKIFEDK 468
+ MA+++ K FE K
Sbjct: 223 ESSISSMAKRIQKYFEKK 240
>gi|6320132|ref|NP_010213.1| Bdf2p [Saccharomyces cerevisiae S288c]
gi|74583636|sp|Q07442.1|BDF2_YEAST RecName: Full=Bromodomain-containing factor 2
gi|1431082|emb|CAA98636.1| BDF2 [Saccharomyces cerevisiae]
gi|285810964|tpg|DAA11788.1| TPA: Bdf2p [Saccharomyces cerevisiae S288c]
gi|392300048|gb|EIW11139.1| Bdf2p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 638
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 66/108 (61%), Gaps = 5/108 (4%)
Query: 367 TGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLN 423
T K F++C +L+ LM K+ + F PVD L L +YF ++++PMDLGT+ L
Sbjct: 318 TLQKKFRTCLKILKVLMSKKNSDINFPFLQPVDPIALNLPNYFDVVKNPMDLGTISNNL- 376
Query: 424 KNW-YKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWV 470
NW YK+ +F +D+ L F+N +NP+G +VH M ++L ++F W+
Sbjct: 377 MNWKYKTIDQFVDDLNLVFYNCFQFNPEGNEVHSMGKKLKELFNFHWL 424
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%)
Query: 391 FNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPK 450
F PVD L + YF ++ PMDL ++T+L N Y S ++ D + N + +N
Sbjct: 158 FLKPVDPIALNIPHYFNYVQTPMDLSLIETKLQGNVYHSVEQVTSDFKTMVDNCLNFNGP 217
Query: 451 GQDVHIMAEQLLKIFEDK 468
+ MA+++ K FE K
Sbjct: 218 ESSISSMAKRIQKYFEKK 235
>gi|301109737|ref|XP_002903949.1| histone acetyltransferase, putative [Phytophthora infestans T30-4]
gi|262096952|gb|EEY55004.1| histone acetyltransferase, putative [Phytophthora infestans T30-4]
Length = 1186
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/111 (43%), Positives = 67/111 (60%), Gaps = 7/111 (6%)
Query: 372 FKSCSALLEKLM---KHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
F+ + +L KLM +++HG VFN PVD L L Y TI++HPMDLGTVK L Y
Sbjct: 374 FEKVTDILLKLMADPRNRHG-VFNTPVDPIALELPAYTTIVQHPMDLGTVKRNLAAGEYL 432
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNRE 479
++F DVRL F NAM +NP+ +H+ A LL F + +++E NR+
Sbjct: 433 ELEDFVSDVRLVFENAMVFNPESHYIHVDAGILLNRFNE---AVKAEQNRQ 480
>gi|401842077|gb|EJT44353.1| BDF2-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 634
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 85/304 (27%), Positives = 152/304 (50%), Gaps = 40/304 (13%)
Query: 367 TGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLN 423
T K F++C +L L K+ + F PVD L L +YF II++PMDLGT+ L
Sbjct: 315 TLQKKFRTCLKILRILGSKKNSDINFPFLQPVDPIALNLPNYFEIIKNPMDLGTISNNL- 373
Query: 424 KNW-YKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRI 482
NW YK+ +F DV L F N +NP+G +VH+M ++L ++F W+ ++ N E+
Sbjct: 374 MNWKYKTVDQFINDVNLVFLNCFQFNPEGNEVHLMGKKLKELFSVHWLENQNVLN-EIET 432
Query: 483 GADYEMGFHTPTSRKAPPLPPPLDMRRILDRSESITHP-----------MDSRLKPISTT 531
+D E ++ + ++ S+ IT+P M+ L+ +
Sbjct: 433 DSDIEEDAYSSSYSSD-----DEYDDEDINESD-ITNPAIQYLEQKLMKMEVELQQLKKQ 486
Query: 532 PSSRTPAPKKPKAKDPH----KRDM---TYDEKQKLST-NLQSLPSEKLDNIVQIIKK-- 581
S+ K+ K P+ +R M + D+ +K T N+ L + +++ ++QIIK
Sbjct: 487 ELSKL--SKRRGRKSPNRSLLRRRMSKRSVDDLKKFITDNINELNNLEMNGMIQIIKNSL 544
Query: 582 -RNSSLFQHDDEIEVDIDSVDAETLWELDRFVTNYKKSLSKNKRKAELANQARAVAQQNV 640
++ L ++DEIE+D+D +D T+ + + ++K S NK++ +N + Q N
Sbjct: 545 PKDEILTSNEDEIEIDLDILDEGTVATI--YENYFEKKNSGNKKRK--SNSRYSAEQLNK 600
Query: 641 QQQT 644
+++T
Sbjct: 601 RKKT 604
Score = 47.8 bits (112), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 41/79 (51%)
Query: 391 FNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPK 450
F PVD L + YF ++ PMDL + +L ++ Y S ++ D R +N +++N
Sbjct: 155 FLNPVDPIALNIPHYFNYVQTPMDLSLIGKKLQESTYHSVEQVKSDFRTMVNNCLSFNGL 214
Query: 451 GQDVHIMAEQLLKIFEDKW 469
V +MA+++ FE K
Sbjct: 215 ESSVSLMAKRIQIYFERKL 233
>gi|207346961|gb|EDZ73294.1| YDL070Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 614
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 66/108 (61%), Gaps = 5/108 (4%)
Query: 367 TGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLN 423
T K F++C +L+ LM K+ + F PVD L L +YF ++++PMDLGT+ L
Sbjct: 318 TLQKKFRTCLKILKVLMSKKNSDINFPFLQPVDPIALNLPNYFDVVKNPMDLGTISNNL- 376
Query: 424 KNW-YKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWV 470
NW YK+ +F +D+ L F+N +NP+G +VH M ++L ++F W+
Sbjct: 377 MNWKYKTIDQFVDDLNLVFYNCFQFNPEGNEVHSMGKKLKELFNFHWL 424
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%)
Query: 391 FNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPK 450
F PVD L + YF ++ PMDL ++T+L N Y S ++ D + N + +N
Sbjct: 158 FLKPVDPIALNIPHYFNYVQTPMDLSLIETKLQGNVYHSVEQVTSDFKTMVDNCLNFNGP 217
Query: 451 GQDVHIMAEQLLKIFEDK 468
+ MA+++ K FE K
Sbjct: 218 ESSISSMAKRIQKYFEKK 235
>gi|323349464|gb|EGA83688.1| Bdf2p [Saccharomyces cerevisiae Lalvin QA23]
Length = 633
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 66/108 (61%), Gaps = 5/108 (4%)
Query: 367 TGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLN 423
T K F++C +L+ LM K+ + F PVD L L +YF ++++PMDLGT+ L
Sbjct: 313 TLQKKFRTCLKILKVLMSKKNSDINFPFLQPVDPIALNLPNYFDVVKNPMDLGTISNNL- 371
Query: 424 KNW-YKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWV 470
NW YK+ +F +D+ L F+N +NP+G +VH M ++L ++F W+
Sbjct: 372 MNWKYKTIDQFVDDLNLVFYNCFQFNPEGNEVHSMGKKLKELFNFHWL 419
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%)
Query: 391 FNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPK 450
F PVD L + YF ++ PMDL ++T+L N Y S ++ D + N + +N
Sbjct: 153 FLKPVDPIALNIPHYFNYVQTPMDLSLIETKLQGNVYHSVEQVTSDFKTMVDNCLNFNGP 212
Query: 451 GQDVHIMAEQLLKIFEDK 468
+ MA+++ K FE K
Sbjct: 213 ESSISSMAKRIQKYFEKK 230
>gi|341903331|gb|EGT59266.1| CBN-BET-2 protein [Caenorhabditis brenneri]
Length = 1460
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 62/110 (56%), Gaps = 3/110 (2%)
Query: 366 GTGSKIFKSCSALLEKL--MKHK-HGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G S+ K CS L++++ +K+K VF PVD L + DY +I+ PMDL T+K +L
Sbjct: 738 GKQSEWQKFCSKLIQEMHSLKNKGFAQVFYLPVDPIKLKIFDYLDVIKTPMDLQTIKKKL 797
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVI 472
+ Y P+EF D+ L N YNPKG VH A L +F+++W +
Sbjct: 798 DHKQYIDPEEFVADMNLMVDNCCKYNPKGSAVHQNALDLKALFDERWKLF 847
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 48/84 (57%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ +KHKH W F PVD L + +Y +I PMDL T++ R+ +Y S ++ +D+
Sbjct: 440 VIKDAVKHKHSWPFQFPVDANKLEIPEYHNMITRPMDLHTIEQRIRNIYYWSAQDAIQDI 499
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQL 461
F N +NP DV+ MA+ L
Sbjct: 500 NQLFSNCYKFNPPEYDVYKMAKTL 523
>gi|397641904|gb|EJK74909.1| hypothetical protein THAOC_03385, partial [Thalassiosira oceanica]
Length = 273
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 42/79 (53%), Positives = 52/79 (65%)
Query: 391 FNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPK 450
F VD K LGL DY II+HPMDLGTVK ++N+ YKS E +DVR + N MTYN
Sbjct: 93 FREAVDWKTLGLFDYPQIIKHPMDLGTVKRKINEGKYKSLHEAGDDVRQIWKNCMTYNAD 152
Query: 451 GQDVHIMAEQLLKIFEDKW 469
G D + +AE + K FEDK+
Sbjct: 153 GSDFYNLAESMAKKFEDKF 171
>gi|151941931|gb|EDN60287.1| bromodomain factor [Saccharomyces cerevisiae YJM789]
Length = 638
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 65/108 (60%), Gaps = 5/108 (4%)
Query: 367 TGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLN 423
T K F++C +L+ LM K+ + F PVD L L +YF ++++PMDLGT+ L
Sbjct: 318 TLQKKFRTCLKILKVLMSKKNSDINFPFLQPVDPIALNLPNYFDVVKNPMDLGTISNNL- 376
Query: 424 KNW-YKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWV 470
NW YK+ +F +D+ L F+N +NP+G +VH M + L ++F W+
Sbjct: 377 MNWKYKTIDQFVDDLNLVFYNCFQFNPEGNEVHSMGKNLKELFNFHWL 424
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%)
Query: 391 FNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPK 450
F PVD L + YF ++ PMDL ++T+L N Y S ++ D + N + +N
Sbjct: 158 FLKPVDPIALNIPHYFNYVQTPMDLSLIETKLQGNVYHSVEQVTSDFKTMVDNCLNFNGP 217
Query: 451 GQDVHIMAEQLLKIFEDK 468
+ MA+++ K FE K
Sbjct: 218 ESSISSMAKRIQKYFEKK 235
>gi|396464495|ref|XP_003836858.1| similar to bromodomain containing protein [Leptosphaeria maculans
JN3]
gi|312213411|emb|CBX93493.1| similar to bromodomain containing protein [Leptosphaeria maculans
JN3]
Length = 907
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 66/130 (50%), Gaps = 15/130 (11%)
Query: 372 FKSCSALLEKLMKHKHGWV---FNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
+ C +++ +LMK K+ + F +PVD L + Y II+ PMD GT++ L Y+
Sbjct: 546 LRFCESVMTELMKPKYSAITFPFTSPVDPVALNIPSYLKIIKKPMDFGTIERNLKNGLYQ 605
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEM 488
S K+F D +L F N +NP+G V+ M QL +FE W + AD+ +
Sbjct: 606 SAKDFYADAQLVFQNCYKFNPEGDAVNKMGHQLEDLFESLW-----------KDKADW-L 653
Query: 489 GFHTPTSRKA 498
H PT ++
Sbjct: 654 ALHAPTQEQS 663
Score = 47.4 bits (111), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 3/91 (3%)
Query: 378 LLEKLM---KHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFA 434
LLE++ K K F PV+ LG+ Y I++HPMDL T++ +L Y + +EF
Sbjct: 346 LLERIRNTKKIKVSLAFKDPVNPVLLGIPTYPEIVKHPMDLSTMEHKLKDKKYNNVREFM 405
Query: 435 EDVRLTFHNAMTYNPKGQDVHIMAEQLLKIF 465
D+ N+ +N K V L F
Sbjct: 406 ADLDQMIENSELFNNKHHPVTQAGYNLRAYF 436
Score = 43.9 bits (102), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 5/86 (5%)
Query: 528 ISTTPSSRTPAPKKPKAKDPHKRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLF 587
+ PS A KK K P +T+++K ++S + +L + VQII+ L
Sbjct: 741 VPPPPSKNAKAQKKVKPPAP----LTFNQKSEISEGISTLGDADMRRAVQIIRNGCPHLA 796
Query: 588 Q-HDDEIEVDIDSVDAETLWELDRFV 612
+DDE+E+D+D ++ +TL EL RF+
Sbjct: 797 NVNDDEMELDMDEINDDTLRELHRFI 822
>gi|366999172|ref|XP_003684322.1| hypothetical protein TPHA_0B02160 [Tetrapisispora phaffii CBS 4417]
gi|357522618|emb|CCE61888.1| hypothetical protein TPHA_0B02160 [Tetrapisispora phaffii CBS 4417]
Length = 690
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 60/103 (58%), Gaps = 5/103 (4%)
Query: 372 FKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNW-Y 427
+ C ++++L K+ + F PVD + + YF ++ PMDL TV +LN NW Y
Sbjct: 325 MRFCQGIVKELTSKKYASFNYPFLEPVDPVAMNIPTYFDYVKDPMDLSTVTKKLN-NWEY 383
Query: 428 KSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWV 470
KS +EF DV+L FHN +NP G V++M +L +IF KWV
Sbjct: 384 KSLEEFESDVKLVFHNCYAFNPDGTIVNMMGHRLEEIFNAKWV 426
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%)
Query: 391 FNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPK 450
F PVD L + Y+ I+ PMDL T++ +L + Y SP++ ED L N + +N
Sbjct: 181 FLLPVDPVALNIPHYYNKIQRPMDLMTIEKKLTVDAYDSPEKITEDFNLMVQNCIVFNGP 240
Query: 451 GQDVHIMAEQLLKIFE 466
+ MA + +E
Sbjct: 241 TSGIAQMARNIQAAYE 256
>gi|154299583|ref|XP_001550210.1| hypothetical protein BC1G_10754 [Botryotinia fuckeliana B05.10]
Length = 931
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 57/108 (52%), Gaps = 9/108 (8%)
Query: 372 FKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
K C L +L K K+ F PVD L + +YFT+I+ PMD+ TV +L Y
Sbjct: 550 LKWCEETLNELKKPKYLAFSGAFMDPVDPVALQIPNYFTVIKSPMDISTVSEKLQNGAYT 609
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIF------EDKWV 470
KEF +DV+L FHN +NP+G V +M Q +F +D+W+
Sbjct: 610 RAKEFEQDVKLIFHNCYKFNPEGNPVRLMGRQFEDVFNGLLARKDRWI 657
>gi|347827938|emb|CCD43635.1| hypothetical protein [Botryotinia fuckeliana]
Length = 931
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 57/108 (52%), Gaps = 9/108 (8%)
Query: 372 FKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
K C L +L K K+ F PVD L + +YFT+I+ PMD+ TV +L Y
Sbjct: 550 LKWCEETLNELKKPKYLAFSGAFMDPVDPVALQIPNYFTVIKSPMDISTVSEKLQNGAYT 609
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIF------EDKWV 470
KEF +DV+L FHN +NP+G V +M Q +F +D+W+
Sbjct: 610 RAKEFEQDVKLIFHNCYKFNPEGNPVRLMGRQFEDVFNGLLARKDRWI 657
>gi|395334140|gb|EJF66516.1| Bromodomain-containing protein [Dichomitus squalens LYAD-421 SS1]
Length = 798
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 59/101 (58%), Gaps = 3/101 (2%)
Query: 372 FKSCSALLEKLMKHKHGWV---FNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
K C +L+ L + +H + F PVD +G+ +Y I++ PMDL T+K +L+ Y
Sbjct: 451 MKFCEKILKDLHQKQHYQIAHPFYEPVDPIKMGIPEYPKIVKKPMDLSTMKRKLDTGDYP 510
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKW 469
+P++F +D RL N MT+NP G VH + L +F++KW
Sbjct: 511 TPEKFRDDFRLMVKNCMTFNPPGNPVHEAGKSLQNLFDEKW 551
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 51/107 (47%), Gaps = 12/107 (11%)
Query: 372 FKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN------ 425
++ S+ + L K K F PVD LG+ Y +I+ PMD T++ +L +
Sbjct: 251 WRFSSSTVRTLKKMKDAGPFLNPVDPVALGIPHYPQVIKRPMDFSTIERKLAASNPAKPD 310
Query: 426 ------WYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFE 466
Y ++F +DVRL F N +T+N V M +++ +F+
Sbjct: 311 PNPSNPRYHHAEQFVQDVRLIFTNCVTFNGPDHPVTQMGKRVEAVFD 357
>gi|167526004|ref|XP_001747336.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163774171|gb|EDQ87803.1| predicted protein [Monosiga brevicollis MX1]
Length = 1632
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 67/132 (50%), Gaps = 14/132 (10%)
Query: 359 NELAHGFGTGSKIFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTV 418
+EL H F S +LE+L F PVD L + DYF II+ PMDL T+
Sbjct: 605 DELKHHF----------SPVLERLKGMSAAECFLRPVDPIELNIPDYFEIIKKPMDLSTI 654
Query: 419 KTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNR 478
+ +L K YK P EF +D+RL F NA TYNPK V+ ++ +FED ++ +
Sbjct: 655 EDKLEKGTYKDPWEFCDDMRLMFKNAWTYNPKNHVVYKFTNEVSSVFEDTIDLV----MK 710
Query: 479 EMRIGADYEMGF 490
+R E+ F
Sbjct: 711 RLRFCCGKELTF 722
>gi|298706227|emb|CBJ29268.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 898
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 49/91 (53%)
Query: 375 CSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFA 434
C LE+L++H+HG F APVD DY +I PMDLGTV L+ Y F
Sbjct: 61 CRQALEELIRHQHGAPFTAPVDPTRDRCPDYLMVIEQPMDLGTVAETLDAMKYHDAGAFV 120
Query: 435 EDVRLTFHNAMTYNPKGQDVHIMAEQLLKIF 465
DVRL F NA YNP +H+ A +L K +
Sbjct: 121 SDVRLIFDNARKYNPPKHPIHVAASKLAKTW 151
>gi|58865638|ref|NP_001012031.1| bromodomain testis-specific protein [Rattus norvegicus]
gi|50927337|gb|AAH78999.1| Brdt protein [Rattus norvegicus]
gi|165971045|gb|AAI58631.1| Brdt protein [Rattus norvegicus]
Length = 326
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 49/92 (53%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
+L+ L KH W F PVD L L DY+TII PMDL T+K RL +Y+ E D
Sbjct: 37 VVLKALWKHSFSWPFQQPVDAAKLKLPDYYTIIETPMDLSTIKKRLENRYYEKASECVGD 96
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN G D+ +MA+ L K+F K
Sbjct: 97 FNTMFSNCYLYNKPGDDIVVMAQALEKLFMQK 128
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 36/52 (69%), Gaps = 3/52 (5%)
Query: 372 FKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKT 420
K CS +L++++ KH W F PVDV LGLH+Y+ I+++PMDLGT+K
Sbjct: 272 LKHCSEILKEMLAKKHLPYAWPFYNPVDVDALGLHNYYDIVKNPMDLGTIKV 323
>gi|323447957|gb|EGB03862.1| hypothetical protein AURANDRAFT_55416 [Aureococcus anophagefferens]
Length = 628
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 56/91 (61%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
LL+ +++ + F APVD + LGL DY +++ PMDLGTV+ RL Y +P++ +DV
Sbjct: 320 LLKHVVQQPSSYPFMAPVDAEALGLADYHDVVKAPMDLGTVERRLGGGSYANPQKLVDDV 379
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
RLTF NA YNP VH A L +FE K
Sbjct: 380 RLTFANAQKYNPPAHPVHEAATHLGCVFEKK 410
>gi|25152243|ref|NP_509770.2| Protein BET-2, isoform a [Caenorhabditis elegans]
gi|22265870|emb|CAA93473.3| Protein BET-2, isoform a [Caenorhabditis elegans]
Length = 1209
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 54/100 (54%), Gaps = 3/100 (3%)
Query: 373 KSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKS 429
K CS LL ++ K+ VF PVD L ++DY +I +PMDL T+K +L+ Y
Sbjct: 558 KFCSKLLNEIHSVKNKGFAQVFYLPVDPIKLKIYDYLEVITNPMDLQTIKKKLDFKQYAE 617
Query: 430 PKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKW 469
P+EF D+ L N YNPKG H A +L FE +W
Sbjct: 618 PEEFVHDINLMVDNCCKYNPKGSPAHSNALELRSFFEQRW 657
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 65/134 (48%), Gaps = 10/134 (7%)
Query: 336 AKDKFPPAESNKKSKLNGKKQ------AGNELAHGFGTGSKIFKSCSALLEKLMKHKHGW 389
A D P E+ ++ ++G Q AG H +F +++ +KHKH W
Sbjct: 250 AADTVNPWETPRQEPVDGVVQPRTEPPAGKPTRHTNCLDFVLF----TVVKDALKHKHSW 305
Query: 390 VFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNP 449
F PVD L + +Y I+ PMDL T++ RL +Y ++ +D+ F N ++NP
Sbjct: 306 PFQLPVDAIKLEIPEYHNIVNTPMDLRTIEKRLRNLYYWCAEDAIKDINQVFINCYSFNP 365
Query: 450 KGQDVHIMAEQLLK 463
DV+ MA+ L K
Sbjct: 366 PEYDVYKMAKTLEK 379
>gi|160333520|ref|NP_001103994.1| bromodomain containing 2b [Danio rerio]
gi|157280795|gb|ABV29330.1| truncated bromodomain-containing protein 2b [Danio rerio]
Length = 276
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 51/92 (55%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
L++ L +H W F+ PVD L L DY II+ PMD+GT+K RL N+Y+ E +D
Sbjct: 81 VLVKALWRHHFAWPFHEPVDATRLNLPDYHKIIKQPMDMGTIKKRLENNYYRGASECLQD 140
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN D+ +MA+ L K+F K
Sbjct: 141 FNTMFTNCYIYNKPADDIVLMAQSLEKVFLQK 172
>gi|344231353|gb|EGV63235.1| Bromodomain-containing protein [Candida tenuis ATCC 10573]
Length = 503
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 60/102 (58%), Gaps = 3/102 (2%)
Query: 372 FKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
+ C+ +L+ L+ KH + F PVD L + +Y II+ PMDL T++++L N Y+
Sbjct: 185 LRFCNQILKDLISKKHFSYNFPFLQPVDAVALNIPNYSDIIKQPMDLSTIQSKLANNQYE 244
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWV 470
+ EF DV L F N +NP+G DV +M +L IF+ KW+
Sbjct: 245 NGDEFESDVTLMFENCYKFNPEGTDVSMMGHKLQDIFQKKWI 286
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 40/76 (52%)
Query: 391 FNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPK 450
F PVD+ L + Y+ + PMDL T++ +L + Y+ P++F +D L N + +N +
Sbjct: 45 FLKPVDIIKLNIPFYYNFVPKPMDLSTIEKKLTVSAYEVPEQFIDDFNLMVSNCIKFNGE 104
Query: 451 GQDVHIMAEQLLKIFE 466
+ M + + FE
Sbjct: 105 NSPIAKMGKNIQAYFE 120
>gi|452003453|gb|EMD95910.1| hypothetical protein COCHEDRAFT_1210171 [Cochliobolus
heterostrophus C5]
Length = 912
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 372 FKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
K C +++ +LMK K+ + F +PVD L + Y II+ PMD GT++ L Y+
Sbjct: 545 LKFCESVITELMKPKYSTLTYPFTSPVDPVALNIPSYLKIIKKPMDFGTIEKNLKNGVYQ 604
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKW 469
S K+F D +L F N +NP+G V+ M +L ++FE W
Sbjct: 605 SAKDFYADAQLVFQNCYKFNPEGDAVNQMGHKLEELFESLW 645
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 3/91 (3%)
Query: 378 LLEKLM---KHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFA 434
LLE++ K K F PVD L + Y+ +++HPMDL T++ +L + YK ++F
Sbjct: 346 LLERIRNTKKIKVSLAFKDPVDPVALNIPTYYDVVKHPMDLTTMEAKLKEKKYKYVRDFM 405
Query: 435 EDVRLTFHNAMTYNPKGQDVHIMAEQLLKIF 465
D+ N+ +N K V L F
Sbjct: 406 ADLDQMITNSELFNNKQHPVTQAGYNLRAYF 436
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 50/86 (58%), Gaps = 6/86 (6%)
Query: 537 PAPKKPKAKDPHKR-----DMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQ-HD 590
P P KP P K+ +++ +KQ++S ++ +L ++ VQII+ L +D
Sbjct: 745 PPPAKPIKSAPVKKAKAPAPLSFAQKQEISESISTLGDAEMHRAVQIIRNGCPHLASVND 804
Query: 591 DEIEVDIDSVDAETLWELDRFVTNYK 616
DE+E+D+D ++ +TL EL +F+ + +
Sbjct: 805 DEMELDMDEINDDTLRELLKFIKSLR 830
>gi|301608560|ref|XP_002933843.1| PREDICTED: bromodomain-containing protein 3 [Xenopus (Silurana)
tropicalis]
Length = 1013
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 53/92 (57%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
+L+ L +H W F PVD L L DY+ II++PMDL T++ RL N+Y + +D
Sbjct: 39 VVLKALWRHHFSWPFQQPVDAAKLNLPDYYQIIKNPMDLSTIRKRLEYNYYSKALDCIQD 98
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN G D+ +M+++L K+F +K
Sbjct: 99 FNTMFTNCYIYNKPGDDIVVMSQELEKVFMEK 130
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 54/104 (51%), Gaps = 5/104 (4%)
Query: 372 FKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
K C+ +L ++M KH W F V L D I+HPMDL T++ ++ YK
Sbjct: 294 LKHCNNILNEMMSKKHAEYAWPFYK--TVIPTSLLDCSDAIKHPMDLATIRDKMENGLYK 351
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVI 472
++FA DVRL F N+ YNP +V MA ++ +FE + I
Sbjct: 352 DTQDFASDVRLMFMNSYKYNPPDNEVVNMARKMQDVFEGMFAKI 395
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWEL 608
+ M+YDEK++LS ++ LP EKL IV II+ R SL + +EIE+D +++ TL L
Sbjct: 525 KPMSYDEKRQLSLDINKLPGEKLGRIVHIIQSREPSLKDSNPNEIEIDFETLKQSTLRHL 584
Query: 609 DRFV 612
+++V
Sbjct: 585 EKYV 588
>gi|17568247|ref|NP_509771.1| Protein BET-2, isoform b [Caenorhabditis elegans]
gi|3877722|emb|CAA93475.1| Protein BET-2, isoform b [Caenorhabditis elegans]
Length = 1087
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 54/100 (54%), Gaps = 3/100 (3%)
Query: 373 KSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKS 429
K CS LL ++ K+ VF PVD L ++DY +I +PMDL T+K +L+ Y
Sbjct: 558 KFCSKLLNEIHSVKNKGFAQVFYLPVDPIKLKIYDYLEVITNPMDLQTIKKKLDFKQYAE 617
Query: 430 PKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKW 469
P+EF D+ L N YNPKG H A +L FE +W
Sbjct: 618 PEEFVHDINLMVDNCCKYNPKGSPAHSNALELRSFFEQRW 657
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 63/132 (47%), Gaps = 10/132 (7%)
Query: 336 AKDKFPPAESNKKSKLNGKKQ------AGNELAHGFGTGSKIFKSCSALLEKLMKHKHGW 389
A D P E+ ++ ++G Q AG H +F +++ +KHKH W
Sbjct: 250 AADTVNPWETPRQEPVDGVVQPRTEPPAGKPTRHTNCLDFVLF----TVVKDALKHKHSW 305
Query: 390 VFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNP 449
F PVD L + +Y I+ PMDL T++ RL +Y ++ +D+ F N +N
Sbjct: 306 PFQLPVDAIKLEIPEYHNIVNTPMDLRTIEKRLRNLYYWCAEDAIKDLNTLFDNCKKFND 365
Query: 450 KGQDVHIMAEQL 461
+ D++IM E +
Sbjct: 366 RNDDIYIMCENI 377
>gi|156847379|ref|XP_001646574.1| hypothetical protein Kpol_1055p73 [Vanderwaltozyma polyspora DSM
70294]
gi|156117252|gb|EDO18716.1| hypothetical protein Kpol_1055p73 [Vanderwaltozyma polyspora DSM
70294]
Length = 605
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 62/103 (60%), Gaps = 5/103 (4%)
Query: 372 FKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNW-Y 427
K C ++++L K+ + F PVD L L YF II++P+DLGT+ +LN NW Y
Sbjct: 223 MKFCQTVVKELANKKYASFNYPFLEPVDPVALNLPTYFEIIKNPIDLGTISKKLN-NWEY 281
Query: 428 KSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWV 470
KS +EF D++L F N +NP+G V++M +L +++ KW
Sbjct: 282 KSMEEFETDIKLMFDNCFKFNPEGTIVNMMGHRLEEVYNSKWA 324
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 39/76 (51%)
Query: 391 FNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPK 450
F PVD L + YF I PMDL T++ +LN N Y++P++ + D L N + +N
Sbjct: 79 FILPVDPAALNIPYYFNKITRPMDLSTIERKLNANAYETPEQISSDFNLMVDNCIVFNGP 138
Query: 451 GQDVHIMAEQLLKIFE 466
+ MA + FE
Sbjct: 139 TSMIAQMARNIQAAFE 154
>gi|451856062|gb|EMD69353.1| hypothetical protein COCSADRAFT_166346 [Cochliobolus sativus
ND90Pr]
Length = 912
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 372 FKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
K C +++ +LMK K+ + F +PVD L + Y II+ PMD GT++ L Y+
Sbjct: 545 LKFCESVITELMKPKYSTLTYPFTSPVDPVALNIPSYLKIIKKPMDFGTIEKNLKNGVYQ 604
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKW 469
S K+F D +L F N +NP+G V+ M +L ++FE W
Sbjct: 605 SAKDFYADAQLVFQNCYKFNPEGDAVNQMGHKLEELFESLW 645
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 3/91 (3%)
Query: 378 LLEKLM---KHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFA 434
LLE++ K K F PVD L + Y+ +++HPMDL T++ +L + YK ++F
Sbjct: 346 LLERIRNTKKIKVSLAFKDPVDPVALNIPTYYDVVKHPMDLTTMEAKLKEKKYKYVRDFM 405
Query: 435 EDVRLTFHNAMTYNPKGQDVHIMAEQLLKIF 465
D+ N+ +N K V L F
Sbjct: 406 ADLDQMITNSELFNNKQHPVTQAGYNLRAYF 436
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 50/86 (58%), Gaps = 6/86 (6%)
Query: 537 PAPKKPKAKDPHKR-----DMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQ-HD 590
P P KP P K+ +++ +KQ++S ++ +L ++ VQII+ L +D
Sbjct: 745 PPPAKPIKSAPVKKAKAPAPLSFAQKQEISESISTLGDAEMHRAVQIIRNGCPHLASVND 804
Query: 591 DEIEVDIDSVDAETLWELDRFVTNYK 616
DE+E+D+D ++ +TL EL +F+ + +
Sbjct: 805 DEMELDMDEINDDTLRELLKFIKSLR 830
>gi|196014271|ref|XP_002116995.1| hypothetical protein TRIADDRAFT_60973 [Trichoplax adhaerens]
gi|190580486|gb|EDV20569.1| hypothetical protein TRIADDRAFT_60973 [Trichoplax adhaerens]
Length = 1526
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 53/90 (58%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
A+L+KL F PVD K L + DYF II+HPMDL T+ RL++ YKSP F +D
Sbjct: 156 AVLQKLSSSADAEPFREPVDPKVLNIPDYFDIIKHPMDLSTISRRLHQGMYKSPWGFCDD 215
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIFE 466
+ L F NA YN K VH +L ++FE
Sbjct: 216 MWLMFENAWLYNKKNTRVHKQCTKLAELFE 245
>gi|62945212|dbj|BAD97681.1| open reading frame X [Mus musculus]
Length = 387
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 52/91 (57%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD L L DY II++PMD+GT+K RL N+Y S E +D
Sbjct: 45 VVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDF 104
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN D+ +MA+ L KIF K
Sbjct: 105 NTMFTNCYIYNKPTDDIVLMAQALEKIFLQK 135
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 19/99 (19%)
Query: 341 PPAESNKKSKLNGKKQAGN-------------ELAHGFGTGSKI---FKSCSALLEKLMK 384
PP K++K+ ++++G E+ G K+ + C ++L +++
Sbjct: 264 PPLSEPKQAKVVARRESGGRPIKPPKKDLEDGEVPQHAGKKGKLSEHLRHCDSILREMLS 323
Query: 385 HKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKT 420
KH W F PVD + L LHDY II+HPMDL TVK
Sbjct: 324 KKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKV 362
>gi|218195607|gb|EEC78034.1| hypothetical protein OsI_17464 [Oryza sativa Indica Group]
Length = 323
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 57/78 (73%)
Query: 549 KRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWEL 608
K ++T +EK L L+SLP +K+ N++QI++KRN + EIE+DID +D ET WEL
Sbjct: 151 KWEITLEEKNLLRVGLESLPEKKMHNVLQIVRKRNGNPELVGGEIELDIDEMDVETQWEL 210
Query: 609 DRFVTNYKKSLSKNKRKA 626
DRFV N+KK+L+K++R A
Sbjct: 211 DRFVNNFKKALNKSRRAA 228
>gi|429851515|gb|ELA26702.1| transcription regulator bdf1 [Colletotrichum gloeosporioides Nara
gc5]
Length = 921
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 55/101 (54%), Gaps = 3/101 (2%)
Query: 372 FKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
+ C +L +LM KH + F PVD L + YFTII+ PMDLGT+ +L Y+
Sbjct: 513 LQFCYEVLSELMDQKHAQINFAFLHPVDPVALAIPTYFTIIKRPMDLGTIMGKLKNFDYQ 572
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKW 469
S KEF DV+ F N +N GQ V+ ++L IF + W
Sbjct: 573 SAKEFQGDVKQVFKNCFKFNQPGQPVYENGQELESIFRNLW 613
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHD-YFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
+L + K KHG F V L D Y +++PMD+G ++ L N Y S ++F +D
Sbjct: 319 VLAGVKKTKHGGHFKDAVVKMWPSLADSYILRVKNPMDIGELERNLRDNKYSSLRKFKDD 378
Query: 437 VRLTFHNAMTYN 448
+ L + N+ T+N
Sbjct: 379 LGLIYKNSCTFN 390
>gi|167395679|ref|XP_001741703.1| bromodomain-containing protein [Entamoeba dispar SAW760]
gi|165893699|gb|EDR21839.1| bromodomain-containing protein, putative [Entamoeba dispar SAW760]
Length = 481
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 110/239 (46%), Gaps = 31/239 (12%)
Query: 375 CSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFA 434
C +L +L F PVD L DY+ +IRHPMDL T+ + Y+ +FA
Sbjct: 271 CKQILNQLKLLPEANPFLTPVDPIAQNLPDYYVVIRHPMDLSTITKKFRYGIYEHIDDFA 330
Query: 435 EDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEMGFHTPT 494
DVRL F NAM YNP +HI A LL+ F+D+ I+ Y+ I + H
Sbjct: 331 NDVRLVFKNAMKYNPPRNTIHIFASTLLRYFDDQ---IKEIYDCRRTIKVIFNQDEHNYW 387
Query: 495 SRKAPPLPPPLDMRRILDRSESITHPMDSRLKPISTTPSSRTPAPKKPKAKDPHKRDMTY 554
+ D R ++ +SI + + T P PK ++ +++
Sbjct: 388 N----------DQREWMNFKQSIEELKEEQ----GTFP---------PKMEEERIMPLSF 424
Query: 555 DEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWELDRFVT 613
+EK +LS L+ + K + +++ +K + + + E+E+ ++++ + L++ V+
Sbjct: 425 EEKIELSKRLEEVEGTKQEEVLKYLK-----IDKDEGEVEIKFETLNEQDFIMLNKIVS 478
>gi|440790347|gb|ELR11630.1| SNF2 family Nterminal domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 2175
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 46/75 (61%)
Query: 375 CSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFA 434
C ALL +L +HKH W FN PVD L L DY+ +++ PMDLGT+ +L Y EF
Sbjct: 58 CQALLSRLKRHKHAWPFNQPVDPVALDLPDYWEVVKRPMDLGTIGDKLTSGQYAKVSEFL 117
Query: 435 EDVRLTFHNAMTYNP 449
+D+ L + N + YNP
Sbjct: 118 DDLELVWSNCLLYNP 132
>gi|426225993|ref|XP_004007141.1| PREDICTED: uncharacterized protein LOC101109872 [Ovis aries]
Length = 589
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 52/91 (57%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD L L DY II++PMD+GT+K RL N+Y S E +D
Sbjct: 46 VVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDF 105
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN D+ +MA+ L KIF K
Sbjct: 106 NTMFTNCYIYNKPTDDIVLMAQALEKIFLQK 136
Score = 40.8 bits (94), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 26/49 (53%)
Query: 427 YKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
Y + FA D+RL F N YNP +V MA +L +FE ++ + E
Sbjct: 341 YPDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE 389
>gi|169624656|ref|XP_001805733.1| hypothetical protein SNOG_15588 [Phaeosphaeria nodorum SN15]
gi|111055843|gb|EAT76963.1| hypothetical protein SNOG_15588 [Phaeosphaeria nodorum SN15]
Length = 906
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 54/101 (53%), Gaps = 3/101 (2%)
Query: 372 FKSCSALLEKLMKHKHGWV---FNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
K C ++L +L+K K+ V F +PVD L + Y II+ PMD GT++ L Y+
Sbjct: 545 LKFCESVLAELLKPKYAAVSYPFVSPVDPVALNIPSYLKIIKKPMDFGTIEKNLKAGMYQ 604
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKW 469
S K+F D L F N +NP+G V+ M L IFE W
Sbjct: 605 SAKDFHADAHLVFQNCYKFNPEGDAVNKMGHDLEDIFEKLW 645
Score = 46.6 bits (109), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQ-HDDEIEVDIDSVDAETLWELDR 610
+T+++KQ++S + +L + VQII+ L HDDE+E+D+D ++ +TL EL +
Sbjct: 759 LTFNQKQEISEGISTLGDADMRKAVQIIRNGCPHLASVHDDEMELDMDEINDDTLRELFK 818
Query: 611 FVTNYK 616
F+ + +
Sbjct: 819 FIKSIR 824
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 42/91 (46%), Gaps = 3/91 (3%)
Query: 378 LLEKLM---KHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFA 434
LLE++ K K F PVD L + Y +++ PMDL T++ +L +N Y +EF
Sbjct: 346 LLERIRNTKKIKVSLAFKDPVDHIALNIPTYPELVKKPMDLSTMENKLKENKYTYVREFM 405
Query: 435 EDVRLTFHNAMTYNPKGQDVHIMAEQLLKIF 465
D+ N+ +N K V L F
Sbjct: 406 ADLDQMIENSELFNNKQHPVTQAGYNLRAYF 436
>gi|115460634|ref|NP_001053917.1| Os04g0622000 [Oryza sativa Japonica Group]
gi|38345706|emb|CAE01930.2| OSJNBb0085C12.8 [Oryza sativa Japonica Group]
gi|113565488|dbj|BAF15831.1| Os04g0622000 [Oryza sativa Japonica Group]
gi|125591678|gb|EAZ32028.1| hypothetical protein OsJ_16207 [Oryza sativa Japonica Group]
Length = 338
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 57/78 (73%)
Query: 549 KRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWEL 608
K ++T +EK L L+SLP +K+ N++QI++KRN + EIE+DID +D ET WEL
Sbjct: 156 KWEITLEEKNLLRVGLESLPEKKMHNVLQIVRKRNGNPELVGGEIELDIDEMDVETQWEL 215
Query: 609 DRFVTNYKKSLSKNKRKA 626
DRFV N+KK+L+K++R A
Sbjct: 216 DRFVNNFKKALNKSRRAA 233
>gi|432876083|ref|XP_004072968.1| PREDICTED: bromodomain-containing protein 3-like [Oryzias latipes]
Length = 494
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 52/92 (56%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
+++ L KH+ W F PVD L L DY +I++PMD+GT+K RL N+Y S E +D
Sbjct: 42 VVVKTLWKHQFAWPFYQPVDAIKLCLWDYHKVIKNPMDMGTIKKRLENNYYWSASEAMQD 101
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN D+ +MA+ L KIF K
Sbjct: 102 FNTMFTNCYIYNKPTDDIVLMAQALEKIFLQK 133
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 49/75 (65%), Gaps = 4/75 (5%)
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWELDR 610
M+YDEK++LS ++ LP EKL +V II+ R SL + DEIE+D +++ TL EL+R
Sbjct: 382 MSYDEKRQLSLDINRLPGEKLGRVVHIIQSREPSLRDSNPDEIEIDFETLKPSTLRELER 441
Query: 611 FVTNYKKSLSKNKRK 625
+V K L K +RK
Sbjct: 442 YV---KSCLQKKQRK 453
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 32/55 (58%)
Query: 421 RLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
+++K+ Y P+ FA DVRL F N YNP +V MA +L +FE ++ I E
Sbjct: 176 KMDKSEYSDPQSFATDVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKIPDE 230
>gi|440293863|gb|ELP86910.1| bromodomain containing protein, putative [Entamoeba invadens IP1]
Length = 358
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 113/243 (46%), Gaps = 36/243 (14%)
Query: 375 CSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFA 434
C +L+ L F +PVD L DY+ +I PMDLGT+ +L Y +FA
Sbjct: 151 CKDILKTLKNLPEANPFLSPVDPIAQNLPDYYIVITEPMDLGTITKKLRMGVYDHIDDFA 210
Query: 435 EDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEMGFHTPT 494
DVRLTF NAM YNP VH+ A+ LLK F+DK I+ Y+ + I A+ E +
Sbjct: 211 ADVRLTFKNAMKYNPPRNMVHVFAKTLLKYFDDK---IKELYHSKCTIHANVEKRHNYWN 267
Query: 495 SRKAPPLPPPLDMRRILDRSESITHPM-DSRLKPISTTPSSRTPAPKKPKAKDPHKRDMT 553
D R +D +SI ++ + + TT P ++
Sbjct: 268 -----------DKREWIDFQKSIFELQEEAGIAAMQTT--QFLP--------------LS 300
Query: 554 YDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWELDRFVT 613
++EK LS L+ + K +++ + K+++ + ++ +D+D +D E L L+ V+
Sbjct: 301 FEEKCDLSNKLEEVEGVKQQEVLEFLGKQDA-----EGDVFIDLDDIDDEVLAALNSIVS 355
Query: 614 NYK 616
K
Sbjct: 356 RRK 358
>gi|389608032|dbj|BAM17614.1| putative bromodomain-containing protein [Oryza sativa Japonica
Group]
Length = 330
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 57/78 (73%)
Query: 549 KRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWEL 608
K ++T +EK L L+SLP +K+ N++QI++KRN + EIE+DID +D ET WEL
Sbjct: 158 KWEITLEEKNLLRVGLESLPEKKMHNVLQIVRKRNGNPELVGGEIELDIDEMDVETQWEL 217
Query: 609 DRFVTNYKKSLSKNKRKA 626
DRFV N+KK+L+K++R A
Sbjct: 218 DRFVNNFKKALNKSRRAA 235
>gi|255947958|ref|XP_002564746.1| Pc22g07210 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211591763|emb|CAP98009.1| Pc22g07210 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 812
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 57/102 (55%), Gaps = 3/102 (2%)
Query: 372 FKSCSALLEKLMKHKH-GWV--FNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
+ C +L++L K KH WV F PVD L + Y ++I+ PMDL TV+++L Y+
Sbjct: 464 LRFCQEVLDELHKQKHYNWVMPFYYPVDPVALNIPSYHSVIKKPMDLSTVQSKLKTGQYE 523
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWV 470
+ KEF DVRL F N +N G ++ E+ +IF KW
Sbjct: 524 NAKEFESDVRLIFKNCYRFNIPGDPTYVCGERAEEIFNGKWA 565
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 50/101 (49%), Gaps = 3/101 (2%)
Query: 364 GFGTGSKIFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLN 423
G G K S L L + + PVD L + Y T+I PMDLGT++ +L
Sbjct: 266 GPGLTKMQHKFISKSLTSLKRMHDARFYKEPVDAVKLNIPQYHTVITQPMDLGTMERKLK 325
Query: 424 KNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKI 464
N Y SP+ A+D L +N +N G D H++ ++ +K+
Sbjct: 326 NNQYSSPQAVADDFALMVNNTTIFN--GPD-HLVTQEGIKL 363
>gi|189198604|ref|XP_001935639.1| bromodomain containing protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187982738|gb|EDU48226.1| bromodomain containing protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 851
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 55/101 (54%), Gaps = 3/101 (2%)
Query: 372 FKSCSALLEKLMKHKHGWV---FNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
K C ++L +LMK K+ V F PVD L + Y II+ PMD GT++ L Y+
Sbjct: 488 LKFCESVLTELMKPKYSAVTYPFITPVDPVALNIPSYLKIIKKPMDFGTIEKNLKNGVYQ 547
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKW 469
S K+F D +L F N +NP+G V+ M +L +FE W
Sbjct: 548 SAKDFYADAQLVFQNCYKFNPEGDAVNQMGHKLEDLFESLW 588
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 44/91 (48%), Gaps = 3/91 (3%)
Query: 378 LLEKLM---KHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFA 434
LLE++ K K F PVD LG+ Y I++HPMDL T++++L + Y ++F
Sbjct: 288 LLERIRNTKKIKVSLAFKDPVDPVALGIPQYPEIVKHPMDLSTMESKLKEKKYTYVRDFM 347
Query: 435 EDVRLTFHNAMTYNPKGQDVHIMAEQLLKIF 465
D+ N+ +N K V L F
Sbjct: 348 ADLDQMITNSELFNNKQHPVTQAGYNLRAYF 378
Score = 42.4 bits (98), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 49/88 (55%), Gaps = 10/88 (11%)
Query: 537 PAPKKP-------KAKDPHKRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQ- 588
P P KP KAK P +++ +KQ++S + +L + VQII+ L
Sbjct: 684 PPPAKPMKSSAVKKAKAPAP--LSFAQKQEISEGISTLGDLDMRRAVQIIRNGCPHLANV 741
Query: 589 HDDEIEVDIDSVDAETLWELDRFVTNYK 616
+DDE+E+D++ ++ +TL EL RF+ + +
Sbjct: 742 NDDEMELDMEDINDDTLRELLRFIKSLR 769
>gi|410979451|ref|XP_003996097.1| PREDICTED: bromodomain-containing protein 3 [Felis catus]
Length = 695
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 54/98 (55%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD L L DY II++PMD+GT+K RL ++Y S E +D
Sbjct: 46 VVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENSYYWSASECMQDF 105
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
F N YN D+ +MA+ L KIF K + E
Sbjct: 106 NTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQE 143
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 49/75 (65%), Gaps = 4/75 (5%)
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWELDR 610
M+YDEK++LS ++ LP EKL +V II+ R SL + DEIE+D +++ TL EL+R
Sbjct: 542 MSYDEKRQLSLDINRLPGEKLGRVVHIIQSREPSLRDSNPDEIEIDFETLKPTTLRELER 601
Query: 611 FVTNYKKSLSKNKRK 625
+V K L K +RK
Sbjct: 602 YV---KSCLQKKQRK 613
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 27/50 (54%)
Query: 421 RLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWV 470
+++ Y + FA D+RL F N YNP +V MA +L +FE ++
Sbjct: 332 KMDSREYPDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFA 381
>gi|116309913|emb|CAH66947.1| B0809H07.2 [Oryza sativa Indica Group]
Length = 348
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 57/78 (73%)
Query: 549 KRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWEL 608
K ++T +EK L L+SLP +K+ N++QI++KRN + EIE+DID +D ET WEL
Sbjct: 176 KWEITLEEKNLLRVGLESLPEKKMHNVLQIVRKRNGNPELVGGEIELDIDEMDVETQWEL 235
Query: 609 DRFVTNYKKSLSKNKRKA 626
DRFV N+KK+L+K++R A
Sbjct: 236 DRFVNNFKKALNKSRRAA 253
>gi|440632694|gb|ELR02613.1| hypothetical protein GMDG_05576 [Geomyces destructans 20631-21]
Length = 895
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 55/101 (54%), Gaps = 3/101 (2%)
Query: 372 FKSCSALLEKLMKHKHGWV---FNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
K C +L +L K K+ + F PVD LG+ +YF I++ PMDL T+ LN Y
Sbjct: 528 LKFCEEVLNELKKPKYQGINAPFLIPVDPVALGIPEYFKIVKSPMDLSTITDNLNSGHYA 587
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKW 469
+ K+F D+RL F N +NP V++M ++L F +W
Sbjct: 588 NSKDFEADIRLMFKNCYKFNPPSTAVNVMGQELEAFFNSEW 628
>gi|361126444|gb|EHK98445.1| putative Bromodomain-containing factor 1 [Glarea lozoyensis 74030]
Length = 824
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 55/101 (54%), Gaps = 3/101 (2%)
Query: 372 FKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
+ C +L ++ K KH F PVD L + +YFTII++PMDL TV + L Y
Sbjct: 446 LRFCEHVLNEMKKPKHSAYSLPFLEPVDPVALNIPNYFTIIKNPMDLQTVTSNLRNGVYP 505
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKW 469
S KEF DVRL F N +NP V+ M ++ L +F +W
Sbjct: 506 SAKEFERDVRLIFANCFKFNPANNPVNEMGKRFLDVFNHEW 546
>gi|365761633|gb|EHN03272.1| Bdf2p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 629
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 63/108 (58%), Gaps = 5/108 (4%)
Query: 367 TGSKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLN 423
T K F++C +L L K+ + F PVD L L +YF II++PMDLGT+ L
Sbjct: 310 TLQKKFRTCLKILRILGSKKNSDINFPFLQPVDPIALNLPNYFEIIKNPMDLGTISNNL- 368
Query: 424 KNW-YKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWV 470
NW YK+ +F D+ L F N +NP+G +VH+M ++L ++F W+
Sbjct: 369 MNWKYKTVDQFINDLNLVFLNCFQFNPEGNEVHLMGKKLKELFSVHWL 416
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 41/79 (51%)
Query: 391 FNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPK 450
F PVD L + YF ++ PMDL + +L ++ Y S ++ D R +N +++N
Sbjct: 150 FLNPVDPIALNIPHYFNYVQTPMDLSLIGKKLQESTYHSVEQVKSDFRTMVNNCLSFNGL 209
Query: 451 GQDVHIMAEQLLKIFEDKW 469
V +MA+++ FE K
Sbjct: 210 ESSVSLMAKRIQIYFERKL 228
>gi|226485709|emb|CAX75274.1| bromodomain containing 2 [Schistosoma japonicum]
Length = 612
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 64/107 (59%), Gaps = 3/107 (2%)
Query: 369 SKIFKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN 425
S+ K+CS +L+ + ++ F PVDV LGLHDY+ +++ MDL T++T+L
Sbjct: 178 SEALKACSNILKDISSQRYRDLNHFFLKPVDVVALGLHDYYDVVKKAMDLSTIRTKLESG 237
Query: 426 WYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVI 472
Y + +FA+DVRL F+N YN + +V + +QL IF++ + +
Sbjct: 238 QYHTKYDFADDVRLMFNNCYKYNGEDSEVARVGKQLQTIFDENFAKV 284
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 49/75 (65%), Gaps = 4/75 (5%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWEL 608
R MTYDEK++LS ++ LP EKL +VQII++R S + DEIE+D +++ TL EL
Sbjct: 448 RPMTYDEKRQLSLDINKLPGEKLGRVVQIIQQREPSHRDCNPDEIEIDFETLQHTTLREL 507
Query: 609 DRFVTNYKKSLSKNK 623
+++V K L K K
Sbjct: 508 EKYV---KSVLQKTK 519
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 32/57 (56%)
Query: 413 MDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKW 469
MDLGT+K RLN +Y S E +D+ F N +N G DV MA +L +I ++
Sbjct: 1 MDLGTIKQRLNLKFYHSSSECLDDLFTMFRNCYIFNKPGDDVVAMAMKLEQIARERL 57
>gi|255072301|ref|XP_002499825.1| bromodomain-containing protein [Micromonas sp. RCC299]
gi|226515087|gb|ACO61083.1| bromodomain-containing protein [Micromonas sp. RCC299]
Length = 675
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 57/102 (55%), Gaps = 2/102 (1%)
Query: 373 KSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNW-YKSPK 431
+ C A L++LM HK FN PVD L L Y I++ PMDLGTV+ + K Y +
Sbjct: 290 RQCLAALKQLMAHKWAHPFNKPVDHVALNLPTYPEIVKRPMDLGTVEANIRKGGVYACAE 349
Query: 432 EFAEDVRLTFHNAMTYNPKGQ-DVHIMAEQLLKIFEDKWVVI 472
E DV L F NA T+ PK + DVH+MA L + + +W +
Sbjct: 350 EVHADVSLVFSNAKTFTPKPEMDVHVMAVALEEFWAQRWAAV 391
>gi|256079712|ref|XP_002576129.1| bromodomain-containing protein 3 brd3 [Schistosoma mansoni]
gi|353230012|emb|CCD76183.1| putative bromodomain-containing protein 3, brd3 [Schistosoma
mansoni]
Length = 692
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 64/107 (59%), Gaps = 3/107 (2%)
Query: 369 SKIFKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN 425
S+ K+CS +L+ + ++ F PVDV LGLHDY+ +++ MDL T+KT+L
Sbjct: 257 SEALKACSNILKDISSQRYRDLNHFFLKPVDVVALGLHDYYDVVKKAMDLSTIKTKLESG 316
Query: 426 WYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVI 472
Y + +FA+DVRL F+N YN + +V + +QL IF++ + +
Sbjct: 317 QYHTKYDFADDVRLMFNNCYKYNGEDSEVARVGKQLQAIFDENFAKV 363
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 51/89 (57%)
Query: 381 KLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLT 440
+L K K W F PVD + L L DY II+HPMDLGT+K RLN +Y S E +D+
Sbjct: 48 RLFKEKIVWPFTKPVDHQRLNLPDYPKIIKHPMDLGTIKQRLNLKFYHSSSECLDDLFTM 107
Query: 441 FHNAMTYNPKGQDVHIMAEQLLKIFEDKW 469
F N +N G DV MA +L +I ++
Sbjct: 108 FRNCYIFNKPGDDVVAMAMKLEQIARERL 136
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 49/75 (65%), Gaps = 4/75 (5%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWEL 608
R MTYDEK++LS ++ LP EKL +VQII++R S + DEIE+D +++ TL EL
Sbjct: 528 RPMTYDEKRQLSLDINKLPGEKLGRVVQIIQQREPSHRDCNPDEIEIDFETLQHTTLREL 587
Query: 609 DRFVTNYKKSLSKNK 623
+++V K L K K
Sbjct: 588 EKYV---KSVLQKTK 599
>gi|38014413|gb|AAH60452.1| LOC398944 protein, partial [Xenopus laevis]
Length = 466
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 53/91 (58%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+L+ L +H+ W F PVD L L DY+ II++PMDL T++ RL N+Y + +D
Sbjct: 40 VLKSLWRHQFSWPFQQPVDAVKLNLPDYYQIIKNPMDLSTIRKRLEYNYYSKALDCIQDF 99
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN G D+ +MA++L K F +K
Sbjct: 100 NTMFTNCYIYNKPGDDIVLMAQELEKAFMEK 130
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 57/107 (53%), Gaps = 5/107 (4%)
Query: 372 FKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
K C+ +L ++M KH W F DV L DY ++HPMDLGT++ ++ YK
Sbjct: 293 LKHCNNILNEMMSKKHAEYAWPFYK--DVIPTSLLDYSDAMKHPMDLGTIRDKMENGLYK 350
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
++FA DVRL F N YNP +V MA +L +FE + I E
Sbjct: 351 DTQDFASDVRLMFMNCYKYNPPDNEVVNMARKLQDVFEGMFAKIPDE 397
>gi|426020769|sp|F7DRV9.1|BRDT_XENTR RecName: Full=Bromodomain testis-specific protein
Length = 933
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 53/92 (57%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
+L+ L +H W F PVD L L DY+ II++PMDL T++ RL N+Y + +D
Sbjct: 39 VVLKALWRHHFSWPFQQPVDAAKLNLPDYYQIIKNPMDLSTIRKRLEYNYYSKALDCIQD 98
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN G D+ +M+++L K+F +K
Sbjct: 99 FNTMFTNCYIYNKPGDDIVVMSQELEKVFMEK 130
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 54/104 (51%), Gaps = 5/104 (4%)
Query: 372 FKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
K C+ +L ++M KH W F V L D I+HPMDL T++ ++ YK
Sbjct: 284 LKHCNNILNEMMSKKHAEYAWPFYK--TVIPTSLLDCSDAIKHPMDLATIRDKMENGLYK 341
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVI 472
++FA DVRL F N+ YNP +V MA ++ +FE + I
Sbjct: 342 DTQDFASDVRLMFMNSYKYNPPDNEVVNMARKMQDVFEGMFAKI 385
>gi|310800423|gb|EFQ35316.1| hypothetical protein GLRG_10460 [Glomerella graminicola M1.001]
Length = 912
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 56/95 (58%), Gaps = 3/95 (3%)
Query: 378 LLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFA 434
+L +LM K+ + F APVD L + YFTII+ PMDLGT+ T++ Y+S K+F
Sbjct: 512 VLNELMDAKNAHCNFAFLAPVDPVALAIPTYFTIIKRPMDLGTIMTKIKSYDYQSIKDFQ 571
Query: 435 EDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKW 469
D++L F N +N GQ V+ +QL IF + W
Sbjct: 572 TDIKLVFKNCYKFNQPGQPVYEQGQQLELIFRNLW 606
>gi|165970446|gb|AAI58274.1| LOC100144959 protein [Xenopus (Silurana) tropicalis]
Length = 476
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 53/92 (57%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
+L+ L +H W F PVD L L DY+ II++PMDL T++ RL N+Y + +D
Sbjct: 39 VVLKALWRHHFSWPFQQPVDAAKLNLPDYYQIIKNPMDLSTIRKRLEYNYYSKALDCIQD 98
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN G D+ +M+++L K+F +K
Sbjct: 99 FNTMFTNCYIYNKPGDDIVVMSQELEKVFMEK 130
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 52/98 (53%), Gaps = 5/98 (5%)
Query: 372 FKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
K C+ +L ++M KH W F V L D I+HPMDL T++ ++ YK
Sbjct: 294 LKHCNNILNEMMSKKHAEYAWPFYK--TVIPTSLLDCSDAIKHPMDLATIRDKMENGLYK 351
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFE 466
++FA D+RL F N+ YNP +V MA ++ +FE
Sbjct: 352 DTQDFASDIRLMFMNSYKYNPPDNEVVNMARKMQDVFE 389
>gi|403415508|emb|CCM02208.1| predicted protein [Fibroporia radiculosa]
Length = 771
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/324 (23%), Positives = 137/324 (42%), Gaps = 42/324 (12%)
Query: 372 FKSCSALLEKLMKHKHGWV---FNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
K C +L+ L K + F PVD L + Y +++ PMDL T+K +L Y
Sbjct: 428 LKHCEKVLKDLHKKSLYGIAHPFYEPVDWVKLEIPQYPKVVKRPMDLSTIKRKLTDGEYS 487
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEM 488
+P +F +D +L N +NP VH ++L ++F+DKW + ++E D E
Sbjct: 488 TPDKFRDDFKLMIRNCFAFNPPKNPVHEAGKELDRLFDDKWRELPPLRSQEASDDEDDEE 547
Query: 489 GFHTPTSRKAPPLPPPLDMRRILDRSESITHPMDSRLK---------------------P 527
+ R R++ ES M S L P
Sbjct: 548 DEDSEDDRA-----------RMIATMESQIQSMRSNLDTLKRKGKPEKKEKKKKEKAVVP 596
Query: 528 ISTTPSSRTPAPK-----KPKAKDPHKRD--MTYDEKQKLSTNLQSLPSEKLDNIVQIIK 580
+++T S T K + K K P D +T+++K+ LS + L +L+ ++QII
Sbjct: 597 VASTSKSTTKQAKAASSGRKKGKKPITDDDVLTFEQKKDLSDTIGKLDGHRLEKVIQIIH 656
Query: 581 KRNSSLFQHDDEIEVDIDSVDAETLWELDRFVTNYKKSLSKNKRKAELANQARAVAQQNV 640
+ + +EIE++ID + + L +L FV ++ + + + + ++++
Sbjct: 657 EGVPEIRDSTEEIELEIDQLPSTVLTKLYNFVIRPMRAQTTKRSRTGKGTGTGGLKRKSM 716
Query: 641 QQQTPAPVVTEVRKEIRTDDRIGS 664
+ A + + + I+ D GS
Sbjct: 717 DEDVEAAKIRALEERIKLFDGRGS 740
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 48/107 (44%), Gaps = 12/107 (11%)
Query: 372 FKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN------ 425
++ C++ + L K K F PVD L + Y +I++HPMD TV+ ++
Sbjct: 229 WRFCTSTIRTLKKIKDAGPFLHPVDPVALNVPHYPSIVKHPMDFSTVERKMTSCNPSKPD 288
Query: 426 ------WYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFE 466
Y + EF DVRL F N +N + M ++ +F+
Sbjct: 289 PNPANPRYNNVDEFIADVRLIFTNCALFNGPDHPITAMGRRVEAVFD 335
>gi|114108122|gb|AAI23311.1| LOC398944 protein [Xenopus laevis]
Length = 465
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 53/91 (58%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+L+ L +H+ W F PVD L L DY+ II++PMDL T++ RL N+Y + +D
Sbjct: 40 VLKSLWRHQFSWPFQQPVDAVKLNLPDYYQIIKNPMDLSTIRKRLEYNYYSKALDCIQDF 99
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN G D+ +MA++L K F +K
Sbjct: 100 NTMFTNCYIYNKPGDDIVLMAQELEKAFMEK 130
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 57/107 (53%), Gaps = 5/107 (4%)
Query: 372 FKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
K C+ +L ++M KH W F DV L DY ++HPMDLGT++ ++ YK
Sbjct: 293 LKHCNNILNEMMSKKHAEYAWPFYK--DVIPTSLLDYSDAMKHPMDLGTIRDKMENGLYK 350
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
++FA DVRL F N YNP +V MA +L +FE + I E
Sbjct: 351 DTQDFASDVRLMFMNCYKYNPPDNEVVNMARKLQDVFEGMFAKIPDE 397
>gi|326434902|gb|EGD80472.1| hypothetical protein PTSG_13143 [Salpingoeca sp. ATCC 50818]
Length = 1105
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 49/101 (48%), Gaps = 3/101 (2%)
Query: 369 SKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN 425
+K + C ++ +L KH W F PV LGL DY + PMDLGTVK R+
Sbjct: 339 TKALRECRKIISELFSKKHAEYAWPFYEPVKADELGLSDYRDFVDTPMDLGTVKKRIESG 398
Query: 426 WYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFE 466
Y F DVRL F N YNP V MA +L +FE
Sbjct: 399 HYSDVDSFIADVRLVFSNCYKYNPSTDPVFGMATKLHNVFE 439
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 52/96 (54%), Gaps = 7/96 (7%)
Query: 371 IFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSP 430
+ K SAL KH W F PVD K L + DY TII+ PMDLGTV +L + Y S
Sbjct: 189 VLKRLSAL-----DSKH-W-FAQPVDWKALNIPDYPTIIKQPMDLGTVSKKLKERTYTSA 241
Query: 431 KEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFE 466
+E +D+ L +N YNP VHI A +L FE
Sbjct: 242 QECIDDIHLMLNNCFVYNPATNPVHIKARELETAFE 277
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQ-HDDEIEVDIDSVDAETLWELDR 610
TYD+K++LS ++ +LP EKL +VQIIK SL + DEIE+D D + TL EL+R
Sbjct: 836 FTYDQKRQLSLDINNLPMEKLPRVVQIIKNYEPSLTHTNPDEIEIDFDKLRPRTLRELER 895
Query: 611 FVTNYKKSLSK 621
+V N K+ +K
Sbjct: 896 YVRNCLKAPTK 906
>gi|449802362|pdb|4DON|A Chain A, Brd4 Bromodomain 1 Complex With A Fragment
3,4-dihydro-3-methyl-2(1h)- Quinazolinon
Length = 145
Score = 83.6 bits (205), Expect = 4e-13, Method: Composition-based stats.
Identities = 48/128 (37%), Positives = 66/128 (51%), Gaps = 13/128 (10%)
Query: 341 PPAESNKKSKLNGKKQAGNELAHGFGTGSKIFKSCSALLEKLMKHKHGWVFNAPVDVKNL 400
PP E+ S N K+ N+L + +L+ L KH+ W F PVD L
Sbjct: 25 PPPET---SNPNKPKRQTNQLQYLL----------RVVLKTLWKHQFAWPFQQPVDAVKL 71
Query: 401 GLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQ 460
L DY+ II+ PMD+GT+K RL N+Y + +E +D F N YN G D+ +MAE
Sbjct: 72 NLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEA 131
Query: 461 LLKIFEDK 468
L K+F K
Sbjct: 132 LEKLFLQK 139
>gi|326434901|gb|EGD80471.1| hypothetical protein, variant [Salpingoeca sp. ATCC 50818]
Length = 905
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 49/101 (48%), Gaps = 3/101 (2%)
Query: 369 SKIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN 425
+K + C ++ +L KH W F PV LGL DY + PMDLGTVK R+
Sbjct: 339 TKALRECRKIISELFSKKHAEYAWPFYEPVKADELGLSDYRDFVDTPMDLGTVKKRIESG 398
Query: 426 WYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFE 466
Y F DVRL F N YNP V MA +L +FE
Sbjct: 399 HYSDVDSFIADVRLVFSNCYKYNPSTDPVFGMATKLHNVFE 439
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 53/91 (58%), Gaps = 4/91 (4%)
Query: 378 LLEKL--MKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAE 435
+L++L + KH W F PVD K L + DY TII+ PMDLGTV +L + Y S +E +
Sbjct: 189 VLKRLSALDSKH-W-FAQPVDWKALNIPDYPTIIKQPMDLGTVSKKLKERTYTSAQECID 246
Query: 436 DVRLTFHNAMTYNPKGQDVHIMAEQLLKIFE 466
D+ L +N YNP VHI A +L FE
Sbjct: 247 DIHLMLNNCFVYNPATNPVHIKARELETAFE 277
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 46/70 (65%), Gaps = 1/70 (1%)
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQ-HDDEIEVDIDSVDAETLWELDR 610
TYD+K++LS ++ +LP EKL +VQIIK SL + DEIE+D D + TL EL+R
Sbjct: 836 FTYDQKRQLSLDINNLPMEKLPRVVQIIKNYEPSLTHTNPDEIEIDFDKLRPRTLRELER 895
Query: 611 FVTNYKKSLS 620
+V N K ++
Sbjct: 896 YVRNCLKGVA 905
>gi|260785490|ref|XP_002587794.1| hypothetical protein BRAFLDRAFT_126580 [Branchiostoma floridae]
gi|229272947|gb|EEN43805.1| hypothetical protein BRAFLDRAFT_126580 [Branchiostoma floridae]
Length = 3563
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Query: 379 LEKLMKH-KHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
LEKL + F PVD K LG+ DYF I++HPMDL T+K +L+ YK P E+ +DV
Sbjct: 2266 LEKLYRQDPESLPFRQPVDPKLLGIPDYFDIVKHPMDLSTIKRKLDTGQYKDPWEYCDDV 2325
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFE 466
L F NA YN K V+ +L ++FE
Sbjct: 2326 WLMFDNAWLYNRKTSRVYKYCSKLAEVFE 2354
>gi|403344522|gb|EJY71608.1| Bromodomain-containing protein [Oxytricha trifallax]
Length = 797
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 60/104 (57%)
Query: 373 KSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKE 432
K+ L+ L KH++ W+F+ PVD L + DY+ II++PMDL VKT+LN N Y +
Sbjct: 692 KAAKRLVNTLWKHQNSWIFHEPVDPIKLNIPDYYDIIKNPMDLSQVKTKLNNNEYTKIND 751
Query: 433 FAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEY 476
F DV+L F N + YN V M + + F+ ++ ++ ++
Sbjct: 752 FLYDVQLIFDNCLLYNGDSTQVSQMCKSVRDEFQKQYHILNLDF 795
>gi|449017171|dbj|BAM80573.1| similar to bromodomain containing transcription factor
[Cyanidioschyzon merolae strain 10D]
Length = 821
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 62/104 (59%), Gaps = 3/104 (2%)
Query: 372 FKSCSALLEKLMKHKHGWVFNAPVD-VKNL-GLHDYFTIIRHPMDLGTVKTRLNKNWYKS 429
+ C+ +L+++MK K F PVD + N + DYF II+ PMDLGTV+ +L Y +
Sbjct: 336 MRFCARVLKEIMKMKEARAFLLPVDKLWNPDAIPDYFEIIKQPMDLGTVRQKLESGEYGT 395
Query: 430 -PKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVI 472
P+ F DVRL + NAMTYNP + + +A+ L + FE K +
Sbjct: 396 DPEAFRRDVRLVWSNAMTYNPPDSEYYNIAKMLNEAFERKMQFL 439
>gi|67523055|ref|XP_659588.1| hypothetical protein AN1984.2 [Aspergillus nidulans FGSC A4]
gi|40744729|gb|EAA63885.1| hypothetical protein AN1984.2 [Aspergillus nidulans FGSC A4]
gi|259487345|tpe|CBF85947.1| TPA: protein involved in transcription initiation at
TATA-containing promoters (Eurofung) [Aspergillus
nidulans FGSC A4]
Length = 808
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 59/106 (55%), Gaps = 3/106 (2%)
Query: 372 FKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
K C +L++L K KH + F PVD L + Y +II+ PMDL TV ++LN Y+
Sbjct: 457 LKFCREVLDELHKTKHYSYAFPFYYPVDPVALNIPTYHSIIKKPMDLSTVSSKLNTGQYE 516
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIES 474
+ KEF D+R N +N KG +++ E+L ++F KW ES
Sbjct: 517 NAKEFEMDIRQIMKNCFKFNLKGDPIYMAGEKLEEVFNAKWAQKES 562
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 45/92 (48%)
Query: 379 LEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVR 438
++ L + + PVD + + YF +I+ PMDLGT++ +L N Y SP+ D
Sbjct: 270 IQSLKRLHDARFYKEPVDPVKMAIPTYFDVIKEPMDLGTIEQKLKNNVYTSPQSVFNDFE 329
Query: 439 LTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWV 470
L NA +N V + ++L FE + +
Sbjct: 330 LMVRNAHVFNGPDHIVSVEGKRLQATFEKQML 361
>gi|226485707|emb|CAX75273.1| bromodomain containing 2 [Schistosoma japonicum]
Length = 685
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 64/107 (59%), Gaps = 3/107 (2%)
Query: 369 SKIFKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN 425
S+ K+CS +L+ + ++ F PVDV LGLHDY+ +++ MDL T++T+L
Sbjct: 251 SEALKACSNILKDISSQRYRDLNHFFLKPVDVVALGLHDYYDVVKKAMDLSTIRTKLESG 310
Query: 426 WYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVI 472
Y + +FA+DVRL F+N YN + +V + +QL IF++ + +
Sbjct: 311 QYHTKYDFADDVRLMFNNCYKYNGEDSEVARVGKQLQTIFDENFAKV 357
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 51/89 (57%)
Query: 381 KLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLT 440
+L K K W F PVD + L L DY II+HPMDLGT+K RLN +Y S E +D+
Sbjct: 42 RLFKEKIVWPFTKPVDHQRLNLPDYPKIIKHPMDLGTIKQRLNLKFYHSSSECLDDLFTM 101
Query: 441 FHNAMTYNPKGQDVHIMAEQLLKIFEDKW 469
F N +N G DV MA +L +I ++
Sbjct: 102 FRNCYIFNKPGDDVVAMAMKLEQIARERL 130
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 48/75 (64%), Gaps = 4/75 (5%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWEL 608
R MTYDEK++LS ++ LP KL +VQII++R S + DEIE+D +++ TL EL
Sbjct: 521 RPMTYDEKRQLSLDINKLPGGKLGRVVQIIQQREPSHRDCNPDEIEIDFETLQHTTLREL 580
Query: 609 DRFVTNYKKSLSKNK 623
+++V K L K K
Sbjct: 581 EKYV---KSVLQKTK 592
>gi|226485705|emb|CAX75272.1| bromodomain containing 2 [Schistosoma japonicum]
Length = 685
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 64/107 (59%), Gaps = 3/107 (2%)
Query: 369 SKIFKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN 425
S+ K+CS +L+ + ++ F PVDV LGLHDY+ +++ MDL T++T+L
Sbjct: 251 SEALKACSNILKDISSQRYRDLNHFFLKPVDVVALGLHDYYDVVKKAMDLSTIRTKLESG 310
Query: 426 WYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVI 472
Y + +FA+DVRL F+N YN + +V + +QL IF++ + +
Sbjct: 311 QYHTKYDFADDVRLMFNNCYKYNGEDSEVARVGKQLQTIFDENFAKV 357
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 51/89 (57%)
Query: 381 KLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLT 440
+L K K W F PVD + L L DY II+HPMDLGT+K RLN +Y S E +D+
Sbjct: 42 RLFKEKIVWPFTKPVDHQRLNLPDYPKIIKHPMDLGTIKQRLNLKFYHSSSECLDDLFTM 101
Query: 441 FHNAMTYNPKGQDVHIMAEQLLKIFEDKW 469
F N +N G DV MA +L +I ++
Sbjct: 102 FRNCYIFNKPGDDVVAMAMKLEQIARERL 130
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 49/75 (65%), Gaps = 4/75 (5%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWEL 608
R MTYDEK++LS ++ LP EKL +VQII++R S + DEIE+D +++ TL EL
Sbjct: 521 RPMTYDEKRQLSLDINKLPGEKLGRVVQIIQQREPSHRDCNPDEIEIDFETLQHTTLREL 580
Query: 609 DRFVTNYKKSLSKNK 623
+++V K L K K
Sbjct: 581 EKYV---KSVLQKTK 592
>gi|323449321|gb|EGB05210.1| hypothetical protein AURANDRAFT_38626 [Aureococcus anophagefferens]
Length = 873
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 50/73 (68%)
Query: 394 PVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQD 453
PVD L L DYF II++PMDLG++K R+ N YKS EF DVRLTF NA++YN G D
Sbjct: 3 PVDPVELNLPDYFDIIKNPMDLGSIKKRMENNCYKSISEFGSDVRLTFDNAISYNGDGSD 62
Query: 454 VHIMAEQLLKIFE 466
V +A ++ +FE
Sbjct: 63 VCKVAREMKAVFE 75
>gi|308804515|ref|XP_003079570.1| Protein involved in transcription initiation at TATA-containing
promoters; associates with the basal transcription
factor TFIID; contains two bromodom (ISS) [Ostreococcus
tauri]
gi|116058025|emb|CAL54228.1| Protein involved in transcription initiation at TATA-containing
promoters; associates with the basal transcription
factor TFIID; contains two bromodom (ISS) [Ostreococcus
tauri]
Length = 446
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 57/100 (57%)
Query: 371 IFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSP 430
+ + C +L KH++ +F PVD G+ DY I+++PMDLGTVK +L++ Y P
Sbjct: 60 MVRRCREVLNLTKKHRYHKIFLFPVDPVRQGIPDYPQIVKNPMDLGTVKRKLDERKYVGP 119
Query: 431 KEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWV 470
++F D+RL F N YN D IM E + + FE W+
Sbjct: 120 EDFCADMRLIFSNCALYNGSQSDAGIMGETVHQGFEAAWL 159
Score = 46.6 bits (109), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 38/59 (64%), Gaps = 4/59 (6%)
Query: 574 NIVQIIKKRNSSLFQHDD-EIEVDIDSVDAETLWELDRFVTNYKKSLSKNKRKAELANQ 631
++QI+ ++ L Q DD EIE++I+ +D+ETLW+LD++V + L KRK A Q
Sbjct: 299 RVIQIVSEQRKGLGQADDDEIEINIEELDSETLWKLDKYV---RGVLRPKKRKLNAAEQ 354
>gi|440294998|gb|ELP87938.1| bromodomain containing protein, putative [Entamoeba invadens IP1]
Length = 364
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 97/201 (48%), Gaps = 36/201 (17%)
Query: 381 KLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLT 440
KLM G FN PVD L + YF++I+ PMDLGT+K L+ Y + +EF +DV+LT
Sbjct: 94 KLMTQPEGIAFNVPVDPDALQIPTYFSVIKSPMDLGTIKKNLSDKKYLTKEEFYKDVKLT 153
Query: 441 FHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEMGFHTPTSRKAPP 500
F+NA +N DV+ A +L K+F+ W ++ D + + P
Sbjct: 154 FNNAKVFNHPDSDVYKWAVKLDKMFDGFW-----------KLAFDDKKVVVEKKMVETPH 202
Query: 501 LPPPLDMRRILDRSESITHPMDSRLKPISTTPSSRTPAPKKPKAKDPHKRDMTYDEKQKL 560
+ R + + + T SR K I+ P KP +T++EK+KL
Sbjct: 203 -----EQARSIAKESTGTSRNKSRSKKIN---------PDKP---------LTFEEKKKL 239
Query: 561 STNLQSLP--SEKLDNIVQII 579
+ +LQ + EKLD ++ ++
Sbjct: 240 AEDLQHISKDKEKLDEVLAVL 260
>gi|255071051|ref|XP_002507607.1| bromodomain-containing protein [Micromonas sp. RCC299]
gi|226522882|gb|ACO68865.1| bromodomain-containing protein [Micromonas sp. RCC299]
Length = 433
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 60/111 (54%), Gaps = 16/111 (14%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPK------ 431
+L KLM ++ W FN PVD + G+ DY+ +I+ PMD GT+ T+ + Y +
Sbjct: 151 ILRKLMNNRLSWPFNEPVDAEYWGVQDYYEVIKTPMDFGTIATKYDIGDYNTENSGHGAL 210
Query: 432 EFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFE----------DKWVVI 472
+F DVR F+NA TYN G V+ A+ L +IFE DKW ++
Sbjct: 211 KFVTDVRQVFYNAWTYNQPGHQVYQYAQILARIFETELSKSVGIDDKWGLL 261
>gi|299469913|emb|CBN76767.1| hypothetical protein Esi_0000_0593 [Ectocarpus siliculosus]
Length = 327
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 57/97 (58%), Gaps = 2/97 (2%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
L++ L+ F PVD + LGLHDY +I+ PMDLGTVK RL + Y + + A DV
Sbjct: 3 LIDSLLGSADSEAFREPVDWRGLGLHDYPNLIKRPMDLGTVKVRLERGTYPTAEACAADV 62
Query: 438 RLTFHNAMTYNPKG--QDVHIMAEQLLKIFEDKWVVI 472
RL + N TYN G +D+H A+ L K FE ++ I
Sbjct: 63 RLIWDNCRTYNTGGVPRDLHKAADALSKRFETRFAKI 99
>gi|392571704|gb|EIW64876.1| Bromodomain-containing protein [Trametes versicolor FP-101664 SS1]
Length = 749
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 372 FKSCSALLEKLMKHKHGWV---FNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
K C L + L + +H + F PVD +G+ +Y +++ PMDL T+K +L+ Y
Sbjct: 404 LKFCEKLWKDLHQKQHYTIAHPFYEPVDPVKMGIPEYPKVVKKPMDLATMKKKLDAGEYS 463
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKW 469
+ ++F ED RL N MT+NP G VH + L +FE+KW
Sbjct: 464 TAEKFREDFRLMVKNCMTFNPPGNPVHEAGKALQVLFEEKW 504
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 51/107 (47%), Gaps = 12/107 (11%)
Query: 372 FKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN------ 425
++ C + + L + K F PVD LG+ Y TII+HPMD +++ +L +
Sbjct: 204 WRFCLSTVRTLKRMKDSGPFLNPVDPVALGIPHYPTIIKHPMDFSSIERKLTTSNPAKPD 263
Query: 426 ------WYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFE 466
Y S + D+RL F N +T+N V M +++ +F+
Sbjct: 264 PNPANPRYGSVDDIVADIRLIFANCLTFNGPDHPVTQMGKRVEAVFD 310
>gi|353243946|emb|CCA75421.1| related to BDF1-Sporulation protein [Piriformospora indica DSM
11827]
Length = 534
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 114/243 (46%), Gaps = 40/243 (16%)
Query: 373 KSCSALLEKLMKHKH-GWVFNA--PVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKS 429
K C L+ L + ++ WVF PVD+ +Y +I++PMDLGT++ +L+ Y +
Sbjct: 297 KFCKTALDHLYRKEYETWVFPFLRPVDLSEFP--NYLEVIKNPMDLGTIRDKLSHAVYGT 354
Query: 430 PKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEMG 489
+EF +DV+L F N TYNP V A+ L K+F+ KW +E+ + E+
Sbjct: 355 AEEFHKDVKLMFTNCYTYNPDWAPVWGYAKDLEKVFDSKW--------KELPL----EVE 402
Query: 490 FHTPTSRKAPPLPPPLDMRRILDRSESITHPMDSRLKPISTTPSSRTPAPKKPKAKDPHK 549
+SR+ D ++ + +T R +P T P + T +
Sbjct: 403 VQEKSSRR--------DAKKHVGEGPVLTQ---LRTRPNKTKPRNSTAS----------- 440
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWELD 609
+T ++K +L L LP KLD ++++I+KR + + + +D + + E+
Sbjct: 441 -SLTENQKIELCDALWELPDAKLDEVIELIRKRLPQYRNNVETMSLDFEHIPPAVQCEMF 499
Query: 610 RFV 612
F+
Sbjct: 500 DFL 502
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 51/105 (48%), Gaps = 13/105 (12%)
Query: 379 LEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL--NKNWYKSPKEFAED 436
L+ LMKH F PVD + YF +I+ PMDLGT++++L + Y + + F D
Sbjct: 140 LKALMKHPAAVPFLVPVDPVQANIPTYFDVIKQPMDLGTIQSKLMASPCAYDTLQSFVND 199
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMR 481
V L F N +N + + QL ++E+ R+MR
Sbjct: 200 VDLVFDNCYRFNGLAHSISHLGVQL-----------QTEFQRQMR 233
>gi|300176102|emb|CBK23413.2| unnamed protein product [Blastocystis hominis]
Length = 697
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 57/93 (61%), Gaps = 3/93 (3%)
Query: 376 SALLEKLMKHK--HGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEF 433
+ L++ LM+HK HG +FN PVD L Y++II+ PMDLGTV+ RL +Y S E
Sbjct: 23 APLIQLLMQHKDNHG-IFNTPVDPDVQNLPTYYSIIKKPMDLGTVRDRLASGYYTSQSEI 81
Query: 434 AEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFE 466
+D+ L F NA +NP +++ A L K+FE
Sbjct: 82 MDDISLVFRNAQKFNPAPHFIYLCASSLSKVFE 114
>gi|226485711|emb|CAX75275.1| bromodomain containing 2 [Schistosoma japonicum]
Length = 694
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 64/107 (59%), Gaps = 3/107 (2%)
Query: 369 SKIFKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN 425
S+ K+CS +L+ + ++ F PVDV LGLHDY+ +++ MDL T++T+L
Sbjct: 251 SEALKACSNILKDISSQRYRDLNHFFLKPVDVVALGLHDYYDVVKKAMDLSTIRTKLESG 310
Query: 426 WYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVI 472
Y + +FA+DVRL F+N YN + +V + +QL IF++ + +
Sbjct: 311 QYHTKYDFADDVRLMFNNCYKYNGEDSEVARVGKQLQTIFDENFAKV 357
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 51/89 (57%)
Query: 381 KLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLT 440
+L K K W F PVD + L L DY II+HPMDLGT+K RLN +Y S E +D+
Sbjct: 42 RLFKEKIVWPFTKPVDHQRLNLPDYPKIIKHPMDLGTIKQRLNLKFYHSSSECLDDLFTM 101
Query: 441 FHNAMTYNPKGQDVHIMAEQLLKIFEDKW 469
F N +N G DV MA +L +I ++
Sbjct: 102 FRNCYIFNKPGDDVVAMAMKLEQIARERL 130
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 49/75 (65%), Gaps = 4/75 (5%)
Query: 550 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWEL 608
R MTYDEK++LS ++ LP EKL +VQII++R S + DEIE+D +++ TL EL
Sbjct: 521 RPMTYDEKRQLSLDINKLPGEKLGRVVQIIQQREPSHRDCNPDEIEIDFETLQHTTLREL 580
Query: 609 DRFVTNYKKSLSKNK 623
+++V K L K K
Sbjct: 581 EKYV---KSVLQKTK 592
>gi|67483926|ref|XP_657183.1| bromodomain protein [Entamoeba histolytica HM-1:IMSS]
gi|56474427|gb|EAL51797.1| bromodomain protein, putative [Entamoeba histolytica HM-1:IMSS]
gi|449704936|gb|EMD45090.1| bromo domain containing protein [Entamoeba histolytica KU27]
Length = 485
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 107/240 (44%), Gaps = 33/240 (13%)
Query: 375 CSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFA 434
C +L L F PVD L DY+ +I HPMDL T+ + Y+ +FA
Sbjct: 275 CRQILNHLKLLPEASPFLTPVDPIAQNLPDYYVVITHPMDLNTITKKFRYGIYEHIDDFA 334
Query: 435 EDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEMGFHTPT 494
DVRL F NAM YNP +HI A LL+ F+D+ I+ Y+ I + H
Sbjct: 335 NDVRLVFKNAMKYNPPRNTIHIFASTLLRYFDDQ---IKEIYDCRRSIKVIFNQDEHNYW 391
Query: 495 SRKAPPLPPPLDMRRILDRSESITHPMDSR-LKPISTTPSSRTPAPKKPKAKDPHKRDMT 553
+ D R +D +SI + + + P+ P ++
Sbjct: 392 N----------DQREWMDFKQSIEELKEEQGILPLKMEEERVIP--------------LS 427
Query: 554 YDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWELDRFVT 613
++EK +LS L+ + K + +++ +K + + + EIE+ ++++ + L L++ V+
Sbjct: 428 FEEKIELSKRLEEVEGAKQEEVLKYLK-----IDKDEGEIEIKFETLNEQDLIMLNKIVS 482
>gi|406602290|emb|CCH46128.1| Bromodomain-containing factor 1 [Wickerhamomyces ciferrii]
Length = 683
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 56/96 (58%), Gaps = 3/96 (3%)
Query: 378 LLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFA 434
+L++L K+ + F PVD L YF + PMDL TV+ +LN N Y++ EF
Sbjct: 367 VLKELTSKKYESFNYPFLEPVDPVALNCPTYFDYVSEPMDLSTVQNKLNNNIYENADEFE 426
Query: 435 EDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWV 470
D+RL F N ++NP+G V++M +L +F+ +WV
Sbjct: 427 RDIRLIFQNCYSFNPEGTAVNMMGHRLEAVFDKRWV 462
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 42/88 (47%)
Query: 379 LEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVR 438
L+ + + K F PVD L + Y+ I PMDL T++ +LN N Y +EF +D
Sbjct: 195 LKIIKRMKDAGPFLHPVDTVKLQIPLYYNFITRPMDLSTIERKLNANAYAELQEFIDDFN 254
Query: 439 LTFHNAMTYNPKGQDVHIMAEQLLKIFE 466
L N + +N + M+ + FE
Sbjct: 255 LMVDNCVRFNGAESGIAQMSRNIQASFE 282
>gi|328866095|gb|EGG14481.1| ankyrin repeat-containing protein [Dictyostelium fasciculatum]
Length = 2116
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 62/95 (65%)
Query: 375 CSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFA 434
C+ + ++ K K+ VF+ PVD G+ Y II++PMDLGT+KT+L+ YK+ KEFA
Sbjct: 503 CNGIYTQIYKRKNAEVFHYPVDPVADGVPTYLDIIKNPMDLGTMKTKLDNGSYKTIKEFA 562
Query: 435 EDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKW 469
D+RL F NA+T+N G + +A+ LL+ F K+
Sbjct: 563 ADMRLMFINALTFNLDGTPIWKLAKSLLQNFNTKF 597
>gi|261278845|pdb|3JVJ|A Chain A, Crystal Structure Of The Bromodomain 1 In Mouse Brd4
gi|261278846|pdb|3JVK|A Chain A, Crystal Structure Of Bromodomain 1 Of Mouse Brd4 In
Complex With Histone H3-K(Ac)14
gi|302566174|pdb|3MUK|A Chain A, Crystal Structure Of Brd4 Bromodomain 1 With Propionylated
Histone H3- K(Prop)23
gi|302566176|pdb|3MUL|A Chain A, Crystal Structure Of Brd4 Bromodomain 1 With Butyrylated
Histone H3- K(Buty)14
Length = 131
Score = 82.4 bits (202), Expect = 7e-13, Method: Composition-based stats.
Identities = 48/128 (37%), Positives = 66/128 (51%), Gaps = 13/128 (10%)
Query: 341 PPAESNKKSKLNGKKQAGNELAHGFGTGSKIFKSCSALLEKLMKHKHGWVFNAPVDVKNL 400
PP E+ S N K+ N+L + +L+ L KH+ W F PVD L
Sbjct: 9 PPPET---SNPNKPKRQTNQLQYLL----------RVVLKTLWKHQFAWPFQQPVDAVKL 55
Query: 401 GLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQ 460
L DY+ II+ PMD+GT+K RL N+Y + +E +D F N YN G D+ +MAE
Sbjct: 56 NLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEA 115
Query: 461 LLKIFEDK 468
L K+F K
Sbjct: 116 LEKLFLQK 123
>gi|321456598|gb|EFX67701.1| hypothetical protein DAPPUDRAFT_261209 [Daphnia pulex]
Length = 200
Score = 82.4 bits (202), Expect = 7e-13, Method: Composition-based stats.
Identities = 45/125 (36%), Positives = 67/125 (53%), Gaps = 3/125 (2%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+L L ++H W F+ PVD K LGL DYF +I+ PMDLGTV RL ++Y S + D+
Sbjct: 44 VLPALWDYRHAWPFHEPVDTKKLGLIDYFQVIKFPMDLGTVMKRLENHYYWSALDCIRDI 103
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWV---VIESEYNREMRIGADYEMGFHTPT 494
+ F N TYN +D+ M +QL KIF + +E E N + + ++G
Sbjct: 104 NILFANCYTYNDPKEDLVWMGQQLEKIFRRQLARMPKVEMEENSTPGLATEKQIGPQASA 163
Query: 495 SRKAP 499
++ P
Sbjct: 164 TQADP 168
>gi|291336160|gb|ADD95738.1| predicted protein [uncultured organism MedDCM-OCT-S04-C2]
Length = 218
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 51/80 (63%)
Query: 390 VFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNP 449
+F PVD K LGL DY I++ PMDLGTVK + KN YK +E A DVRL + N M YN
Sbjct: 30 IFREPVDWKALGLTDYIQIVKTPMDLGTVKKNIEKNVYKDIEECANDVRLVWTNCMLYNR 89
Query: 450 KGQDVHIMAEQLLKIFEDKW 469
G + + +A++ K FED +
Sbjct: 90 DGSEYYHLADKFSKAFEDAY 109
>gi|402218827|gb|EJT98902.1| Bromodomain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 824
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 127/306 (41%), Gaps = 57/306 (18%)
Query: 372 FKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
K C+++L+ L K + + F PVD L + DY II+ PMDL T+K +L Y+
Sbjct: 442 LKFCASVLQHLFKKSYYSAAYPFYDPVDYVALNIPDYPKIIKKPMDLSTMKKKLESKTYE 501
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYN----------- 477
+ +EF D +L N YNP V E+L +IF++KW + Y
Sbjct: 502 NAQEFHADFKLMIKNCRLYNPAQSPVREAGEELNRIFDEKWKGLPPLYQLEEEEEEDEEE 561
Query: 478 REMRIGADYEM-GFHTPTSRKAPPLPPPLDMRRILDRSESITHPMDSRLKPISTTPSS-- 534
E G D M G +R + + L++ + ++ K + P
Sbjct: 562 DEDEEGVDMAMAGVQAQVAR----------LVKTLEQLQKQKADKTAKKKAVPAVPKEDS 611
Query: 535 --RTPAPKKPK-----------AKDPHKRD-----------MTYDEKQKLSTNLQSLPSE 570
+ P+KPK P KR + + +K++L+ + L E
Sbjct: 612 KPKASKPRKPKPSGSAGTPTAGPSKPRKRKDKDEESDEDGPVDFFKKRELAEEIPKLEGE 671
Query: 571 KLDNIVQIIKKRNSS--LFQHDDEIEVDIDSVDAETLWELDRFVTNYKKSLSKNKRKAEL 628
L + +I++ SS DDEIE+DID + + L R V +K KR+AE
Sbjct: 672 ALTEALALIQEGMSSENPTGPDDEIELDIDILAPSVIRRLYRMVVEP----AKKKREAEE 727
Query: 629 ANQARA 634
+ RA
Sbjct: 728 KRKMRA 733
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 58/114 (50%), Gaps = 21/114 (18%)
Query: 373 KSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL---------- 422
K +A + +L K++ F PVD L + Y +I+HPMDLGTV+ +L
Sbjct: 220 KYAAATIRQLKKNRDAAPFLKPVDTVGLNIPHYHNVIKHPMDLGTVEEKLALSNPAVKSK 279
Query: 423 ----------NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFE 466
+K ++ + EF DVRL NA+ +N + V MA++LL+IF+
Sbjct: 280 QSGSATESDPSKRYWTA-DEFVADVRLIVDNAIKFNGEAHVVSQMAKRLLEIFD 332
>gi|344301621|gb|EGW31926.1| hypothetical protein SPAPADRAFT_61027 [Spathaspora passalidarum
NRRL Y-27907]
Length = 330
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 55/85 (64%)
Query: 385 HKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNA 444
+ + + F +PVD L + +Y +++ PMDLGT++T+L N Y++ EF DVRL F N
Sbjct: 6 YNYNFPFLSPVDTVALNIPNYNEVVKEPMDLGTIQTKLANNQYENGDEFEHDVRLVFKNC 65
Query: 445 MTYNPKGQDVHIMAEQLLKIFEDKW 469
+NP+G DV++M +L +F+ KW
Sbjct: 66 YLFNPEGTDVNMMGHRLEAVFDKKW 90
>gi|134105371|pdb|2OSS|A Chain A, Crystal Structure Of The Bromo Domain 1 In Human
Bromodomain Containing Protein 4 (Brd4)
gi|308198555|pdb|3MXF|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With The Inhibitor Jq1
gi|312208162|pdb|3P5O|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With Ibet Inhibitor
gi|340707484|pdb|2YEL|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
With The Inhibitor Gw841819x
gi|343197715|pdb|3SVF|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With A Dihydro-Quinazolin Ligand
gi|343197716|pdb|3SVG|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With A 3,5-Dimethylisoxazol Ligand
gi|355333223|pdb|3ZYU|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With I-Bet151(Gsk1210151a)
gi|355333224|pdb|3ZYU|B Chain B, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With I-Bet151(Gsk1210151a)
gi|358009753|pdb|3U5J|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With Alprazolam
gi|358009754|pdb|3U5K|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With Midazolam
gi|358009755|pdb|3U5K|B Chain B, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With Midazolam
gi|358009756|pdb|3U5K|C Chain C, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With Midazolam
gi|358009757|pdb|3U5K|D Chain D, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With Midazolam
gi|358009758|pdb|3U5L|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With A Benzo-Triazepine Ligand (Bzt-7)
gi|371927880|pdb|4A9L|A Chain A, N-Terminal Bromodomain Of Human Brd4 With 1,3-Dimethyl-6-(
Morpholine-4-Sulfonyl)-1,2,3,
4-Tetrahydroquinazolin-2-One
gi|372467090|pdb|3UVW|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With A Diacetylated Histone 4 Peptide
(H4k5ack8ac)
gi|372467092|pdb|3UVY|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With A Diacetylated Histone 4 Peptide
(H4k16ack20ac)
gi|374074443|pdb|3UVX|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With A Diacetylated Histone 4 Peptide
(H4k12ack16ac)
gi|380259062|pdb|3UW9|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With A Diacetylated Histone 4 Peptide
(H4k8ack12ac)
gi|380259063|pdb|3UW9|B Chain B, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With A Diacetylated Histone 4 Peptide
(H4k8ack12ac)
gi|380259064|pdb|3UW9|C Chain C, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With A Diacetylated Histone 4 Peptide
(H4k8ack12ac)
gi|380259065|pdb|3UW9|D Chain D, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With A Diacetylated Histone 4 Peptide
(H4k8ack12ac)
gi|384482557|pdb|4E96|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With The Inhibitor Pfi-1
gi|404312911|pdb|4F3I|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With Ms417 Inhibitor
gi|409107327|pdb|4GPJ|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With A Isoxazolylbenzimidazole Ligand
gi|410563162|pdb|4HBV|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With A Quinazolin Ligand
gi|410563164|pdb|4HBX|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With A Quinazolin Ligand
gi|410563165|pdb|4HBY|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With A Quinazolin Ligand
gi|449802776|pdb|4J0R|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With A 3,5-dimethylisoxazol Ligand
gi|449802777|pdb|4J0S|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With A 3,5-dimethylisoxazol Ligand
Length = 127
Score = 82.4 bits (202), Expect = 8e-13, Method: Composition-based stats.
Identities = 48/128 (37%), Positives = 66/128 (51%), Gaps = 13/128 (10%)
Query: 341 PPAESNKKSKLNGKKQAGNELAHGFGTGSKIFKSCSALLEKLMKHKHGWVFNAPVDVKNL 400
PP E+ S N K+ N+L + +L+ L KH+ W F PVD L
Sbjct: 5 PPPET---SNPNKPKRQTNQLQYLL----------RVVLKTLWKHQFAWPFQQPVDAVKL 51
Query: 401 GLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQ 460
L DY+ II+ PMD+GT+K RL N+Y + +E +D F N YN G D+ +MAE
Sbjct: 52 NLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEA 111
Query: 461 LLKIFEDK 468
L K+F K
Sbjct: 112 LEKLFLQK 119
>gi|410563163|pdb|4HBW|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With A Quinazoline Ligand
Length = 127
Score = 82.4 bits (202), Expect = 8e-13, Method: Composition-based stats.
Identities = 48/128 (37%), Positives = 66/128 (51%), Gaps = 13/128 (10%)
Query: 341 PPAESNKKSKLNGKKQAGNELAHGFGTGSKIFKSCSALLEKLMKHKHGWVFNAPVDVKNL 400
PP E+ S N K+ N+L + +L+ L KH+ W F PVD L
Sbjct: 5 PPPET---SNPNKPKRETNQLQYLL----------RVVLKTLWKHQFAWPFQQPVDAVKL 51
Query: 401 GLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQ 460
L DY+ II+ PMD+GT+K RL N+Y + +E +D F N YN G D+ +MAE
Sbjct: 52 NLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEA 111
Query: 461 LLKIFEDK 468
L K+F K
Sbjct: 112 LEKLFLQK 119
>gi|259090118|pdb|2WP2|A Chain A, Structure Of Brdt Bromodomain Bd1 Bound To A Diacetylated
Histone H4 Peptide.
gi|259090119|pdb|2WP2|B Chain B, Structure Of Brdt Bromodomain Bd1 Bound To A Diacetylated
Histone H4 Peptide
Length = 120
Score = 82.0 bits (201), Expect = 9e-13, Method: Composition-based stats.
Identities = 40/91 (43%), Positives = 51/91 (56%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+L+ L KH W F PVD L L DY+TII+ PMDL T+K RL +Y+ E ED
Sbjct: 22 VLKALWKHGFSWPFQQPVDAVKLKLPDYYTIIKTPMDLNTIKKRLENKYYEKASECIEDF 81
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN G D+ +MA+ L K+F K
Sbjct: 82 NTMFSNCYLYNKTGDDIVVMAQALEKLFMQK 112
>gi|407044057|gb|EKE42339.1| bromodomain containing protein [Entamoeba nuttalli P19]
Length = 485
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 107/240 (44%), Gaps = 33/240 (13%)
Query: 375 CSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFA 434
C +L L F PVD L DY+ +I HPMDL T+ + Y+ +FA
Sbjct: 275 CRQILNHLKLLPEASPFLTPVDPIAQNLPDYYVVITHPMDLNTITKKFRYGIYEHIDDFA 334
Query: 435 EDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEMGFHTPT 494
DVRL F NAM YNP +HI A LL+ F+D+ I+ Y+ I + H
Sbjct: 335 NDVRLVFKNAMKYNPPRNTIHIFASTLLRYFDDQ---IKEIYDCRRSIKVIFNQDEHNYW 391
Query: 495 SRKAPPLPPPLDMRRILDRSESITHPMDSR-LKPISTTPSSRTPAPKKPKAKDPHKRDMT 553
+ D R +D +SI + + + P+ P ++
Sbjct: 392 N----------DQREWMDFKQSIEELKEEQGILPLKMEEERVIP--------------LS 427
Query: 554 YDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWELDRFVT 613
++EK +LS L+ + K + +++ +K + + + EIE+ ++++ + L L++ V+
Sbjct: 428 FEEKIELSKRLEEVEGAKQEEVLKYLK-----IDKDEGEIEIKFETLNEQDLIMLNKIVS 482
>gi|308494761|ref|XP_003109569.1| CRE-BET-2 protein [Caenorhabditis remanei]
gi|308245759|gb|EFO89711.1| CRE-BET-2 protein [Caenorhabditis remanei]
Length = 1383
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 64/122 (52%), Gaps = 2/122 (1%)
Query: 342 PAESNKKSKLNGKKQAGNELAHGFGT--GSKIFKSCSALLEKLMKHKHGWVFNAPVDVKN 399
P ES +++ +NG Q E G T +++ +++ +KHKH W F APVD K+
Sbjct: 364 PWESPRQAPINGIVQPRTEPPPGKPTRHTNRLDYILFTVVKDALKHKHSWPFQAPVDAKS 423
Query: 400 LGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAE 459
L + +Y I PMDL T++ RL +Y + D++ F N +NP DV+ MA+
Sbjct: 424 LQIPEYHNTIARPMDLRTIEKRLRNTYYYCADDAIRDIKQMFSNCYMFNPPEYDVYKMAK 483
Query: 460 QL 461
L
Sbjct: 484 TL 485
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 56/108 (51%), Gaps = 3/108 (2%)
Query: 365 FGTGSKIFKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTR 421
G S+ K C LL ++ K+ VF PVD L + DY +I+ PMDL T+K +
Sbjct: 699 IGKQSEWQKFCVKLLNEMHSVKNKSFAQVFYVPVDPVKLKIVDYLEVIKEPMDLQTIKKK 758
Query: 422 LNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKW 469
L+ Y S +EF D+ L N TYNP G VH A L +FE +W
Sbjct: 759 LDYKQYTSGEEFERDMNLMIDNCCTYNPAGSAVHQNALDLKALFESRW 806
>gi|384254005|gb|EIE27479.1| hypothetical protein COCSUDRAFT_39137 [Coccomyxa subellipsoidea
C-169]
Length = 1401
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 53/93 (56%), Gaps = 1/93 (1%)
Query: 378 LLEKLMKHKHG-WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
+L+K+M+H+ FN PVD + LG+ +Y IIR PMDLG + RL Y S AED
Sbjct: 157 VLKKVMQHEIAESFFNEPVDAEGLGIPEYREIIRTPMDLGMIARRLENGLYVSAAAVAED 216
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKW 469
VRL + N T+N G DV ++L F+ W
Sbjct: 217 VRLVWRNCRTFNEPGSDVSKSCDELAGFFDQLW 249
>gi|19173489|ref|NP_597292.1| GENERAL TRANSCRIPTION FACTOR [Encephalitozoon cuniculi GB-M1]
gi|19171078|emb|CAD26468.1| GENERAL TRANSCRIPTION FACTOR [Encephalitozoon cuniculi GB-M1]
gi|449328789|gb|AGE95065.1| general transcription factor [Encephalitozoon cuniculi]
Length = 370
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 56/96 (58%)
Query: 372 FKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPK 431
K CS +L +L ++ + F PVD LG+ DY I+HPMDL T++ +L+ Y+ P+
Sbjct: 17 LKYCSQILTRLKRNSNAPPFLEPVDPVKLGIPDYPEKIKHPMDLSTIRKKLDSKEYEGPE 76
Query: 432 EFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFED 467
F D+RL F N TYNP G VH M + L ++ D
Sbjct: 77 GFDGDMRLMFSNCYTYNPPGTVVHEMGKGLEAVYTD 112
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 115/250 (46%), Gaps = 42/250 (16%)
Query: 366 GTGSKIFKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G ++ ++ CS L L+K KH W F PVD +L + Y+++I+ PMDL T++++L
Sbjct: 148 GMKAEDYEFCSETLSDLVKPKHKAYNWPFLEPVD-GDL-VPGYYSVIKEPMDLQTMRSKL 205
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRI 482
+ Y+S +EF D+ L N +N G +V++ ++ K + + S ++ + RI
Sbjct: 206 EQRRYQSVEEFGRDLELIVENCKKFNAPGTEVYVCGQEFEKAVKMHMQKV-SPHDIKSRI 264
Query: 483 GADYEMGFHTPTSRKAPPLPPPLDMRRILDRSESITHPMDSRLKPISTTPSSRTPAPKKP 542
T K R+++ S I ++ P+SR
Sbjct: 265 -----------TELK----------RKVMSYSREIRMLESKLMEQTGEMPTSRA------ 297
Query: 543 KAKDPHKRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDA 602
+ +E+ + + ++ E+ +++ +I+ K + F +DEIEVD+ ++
Sbjct: 298 ---------YSLNERVSIGNAILNMSKEQTESVAKIVLKNGAGEFVENDEIEVDMRTIPD 348
Query: 603 ETLWELDRFV 612
+ E+D ++
Sbjct: 349 HVVEEIDMYI 358
>gi|260799457|ref|XP_002594712.1| hypothetical protein BRAFLDRAFT_122791 [Branchiostoma floridae]
gi|229279948|gb|EEN50723.1| hypothetical protein BRAFLDRAFT_122791 [Branchiostoma floridae]
Length = 1962
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 66/139 (47%), Gaps = 17/139 (12%)
Query: 346 NKKSKLNGKKQAGNELAHGFGT---------------GSKIFKSCSALLEKLMKHKHGWV 390
N+KSK +K AGN L+ + SK C +L +L KH+ W
Sbjct: 1816 NRKSKETKEKDAGNSLSDDCPSPMYVPDKKDKKAKNEASKDLAPCRTILPELEKHEDAWP 1875
Query: 391 FNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPK 450
F PV+ K Y II+ PMDL T+K +L N Y+S ++FAEDVRL F N T+N
Sbjct: 1876 FLVPVNTKQFP--QYRKIIKKPMDLSTIKNKLRDNKYRSREDFAEDVRLIFDNCETFNED 1933
Query: 451 GQDVHIMAEQLLKIFEDKW 469
V + FE +W
Sbjct: 1934 DSAVGQAGHNMRACFETRW 1952
>gi|195063000|ref|XP_001996295.1| GH22416 [Drosophila grimshawi]
gi|193899790|gb|EDV98656.1| GH22416 [Drosophila grimshawi]
Length = 291
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 51/88 (57%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L H + + F PV+ K L L DY II+ PMDL T+K RL N+Y S E A D+
Sbjct: 36 VMKSLWNHHYAYPFQQPVNAKKLKLPDYHDIIKQPMDLATIKKRLANNYYWSATEAAADI 95
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIF 465
L F N YN +DV IMA+ L +F
Sbjct: 96 NLIFTNCSLYNKPTEDVIIMAKVLESVF 123
>gi|145353027|ref|XP_001420833.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581068|gb|ABO99126.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 904
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 57/90 (63%), Gaps = 2/90 (2%)
Query: 382 LMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWY--KSPKEFAEDVRL 439
LM HK+ ++F PVD + DYF +I++PMDLGT+K R++ +Y K+ + +A DVRL
Sbjct: 424 LMVHKNAYIFLRPVDPVYWEIPDYFEVIKNPMDLGTIKERIDAGYYDEKNVEAYAADVRL 483
Query: 440 TFHNAMTYNPKGQDVHIMAEQLLKIFEDKW 469
+ NAMTYN V MA + + FE +W
Sbjct: 484 VWSNAMTYNKDDTPVFKMARIMSREFEYQW 513
>gi|67480061|ref|XP_655396.1| bromodomain protein [Entamoeba histolytica HM-1:IMSS]
gi|56472529|gb|EAL50010.1| bromodomain protein, putative [Entamoeba histolytica HM-1:IMSS]
gi|449706339|gb|EMD46207.1| bromo domain containing protein [Entamoeba histolytica KU27]
Length = 557
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 126/286 (44%), Gaps = 40/286 (13%)
Query: 334 LLAKDKFPPAESNKKSKLNGKKQAGNELAHGFGTGSKIFKSCSALLEKLMKHKHGWVFNA 393
+L KDK S K++ KK+ E+ G +K CS++L +M ++ F
Sbjct: 286 VLLKDK-----SRNGKKISRKKEIDIEVVSGKLHMNKDLVICSSILGAIMNNQESEPFKT 340
Query: 394 PVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQD 453
VD L + DY+ I++HPMDL TV +L+K YK+ ++F +D++L F NA YN
Sbjct: 341 EVDPIALNILDYYKIVKHPMDLETVSIKLSKGLYKTKEDFKKDMKLIFENAKIYNSSENS 400
Query: 454 VHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEMGFHTPTSRKAPPLPPPLDMRRILDR 513
+H A L+K F+ + E N I P P P+ +R I +
Sbjct: 401 IHQSAINLMKKFDKMFNSAFLENNPPKLI---------LPEQVSVTPTFLPVAVRPIYEH 451
Query: 514 S------ESITHPMDSRLKPISTTPSSRTPAPKKPKAKDPHKRDMTYDEKQKLSTNLQSL 567
S E+ M ++ I T R + MT EK+ L+ + +
Sbjct: 452 SNFYYCDEAEIEEMKEKMAKIRGTKYQR--------------KQMTIKEKEVLTNQISKM 497
Query: 568 PSEKLDNIVQIIKKRNSSLFQHDDE-IEVDIDSVDAETLWELDRFV 612
SE+++ + ++ +F+ +E++++ D E L + + V
Sbjct: 498 SSERINLLFNVL-----GIFKEPGRVVEINLNDYDEEELINIKKIV 538
>gi|366997424|ref|XP_003678474.1| hypothetical protein NCAS_0J01570 [Naumovozyma castellii CBS 4309]
gi|342304346|emb|CCC72136.1| hypothetical protein NCAS_0J01570 [Naumovozyma castellii CBS 4309]
Length = 678
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 60/102 (58%), Gaps = 5/102 (4%)
Query: 372 FKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNW-Y 427
K C +++++L K+ + F PVD L L YF ++ PMDLGTV T+L+ NW Y
Sbjct: 321 MKFCQSVIKELTNKKYASFNYPFLEPVDPVALNLPTYFDYVKEPMDLGTVATKLS-NWEY 379
Query: 428 KSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKW 469
+S +F +DV L F N +NP G V++M +L ++F KW
Sbjct: 380 QSMDDFKKDVDLVFKNCYAFNPDGTIVNMMGHRLEEVFVSKW 421
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%)
Query: 391 FNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPK 450
F PVD+ L + Y+ ++ PMDL T++ +LN N Y +P++ ED L N++ +N
Sbjct: 169 FLQPVDIVALNIPLYYNYVKRPMDLSTIEKKLNVNAYATPEQITEDFNLMVSNSIAFNGP 228
Query: 451 GQDVHIMAEQLLKIFE 466
+ MA + FE
Sbjct: 229 TAVISQMARNIQAAFE 244
>gi|403214547|emb|CCK69048.1| hypothetical protein KNAG_0B06180 [Kazachstania naganishii CBS
8797]
Length = 654
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 62/102 (60%), Gaps = 5/102 (4%)
Query: 372 FKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNW-Y 427
K C +++++L K+ + F PVD ++ L YF ++ PMDLGT+ +L+ NW Y
Sbjct: 289 MKYCVSVVKELTNKKYASFNYPFLEPVDPVSMNLPTYFDYVKEPMDLGTISKKLS-NWEY 347
Query: 428 KSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKW 469
++ +EF D+RL F N ++NP G V++M +L ++F KW
Sbjct: 348 QTMEEFEADIRLVFKNCYSFNPDGTIVNMMGHRLEEVFNSKW 389
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 51/106 (48%), Gaps = 9/106 (8%)
Query: 391 FNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPK 450
F PVD L L YF I+ PMDL TV+ +LN N Y++P+ ED L N + +N
Sbjct: 139 FLQPVDTVALNLPLYFNYIKRPMDLSTVERKLNLNAYETPESVTEDFNLMVDNCVKFNGP 198
Query: 451 GQDVHIMAEQLLKIFE---------DKWVVIESEYNREMRIGADYE 487
+ MA + FE D V+I+ +R+ + G + E
Sbjct: 199 ASAIAQMARNIQASFEKHMLNMPAKDAPVIIQQNKSRKKKKGGEDE 244
>gi|340707459|pdb|2YDW|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd2
With The Inhibitor Gw841819x
gi|340707460|pdb|2YDW|B Chain B, Crystal Structure Of The First Bromodomain Of Human Brd2
With The Inhibitor Gw841819x
gi|340707461|pdb|2YDW|C Chain C, Crystal Structure Of The First Bromodomain Of Human Brd2
With The Inhibitor Gw841819x
gi|340707481|pdb|2YEK|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd2
With The Inhibitor Gsk525762 (Ibet)
gi|340707482|pdb|2YEK|B Chain B, Crystal Structure Of The First Bromodomain Of Human Brd2
With The Inhibitor Gsk525762 (Ibet)
gi|340707483|pdb|2YEK|C Chain C, Crystal Structure Of The First Bromodomain Of Human Brd2
With The Inhibitor Gsk525762 (Ibet)
gi|393715359|pdb|4AKN|A Chain A, N-Terminal Bromodomain Of Human Brd2 With
Tbutyl-Phenyl-Amino-
Dimethyl-Oxazolyl-Quinoline-Carboxylic Acid
gi|393715360|pdb|4AKN|B Chain B, N-Terminal Bromodomain Of Human Brd2 With
Tbutyl-Phenyl-Amino-
Dimethyl-Oxazolyl-Quinoline-Carboxylic Acid
gi|393715361|pdb|4AKN|C Chain C, N-Terminal Bromodomain Of Human Brd2 With
Tbutyl-Phenyl-Amino-
Dimethyl-Oxazolyl-Quinoline-Carboxylic Acid
Length = 153
Score = 81.6 bits (200), Expect = 1e-12, Method: Composition-based stats.
Identities = 40/98 (40%), Positives = 54/98 (55%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD LGL DY II+ PMD+GT+K RL N+Y + E +D
Sbjct: 40 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDF 99
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
F N YN D+ +MA+ L KIF K + E
Sbjct: 100 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQE 137
>gi|330913598|ref|XP_003296313.1| hypothetical protein PTT_05982 [Pyrenophora teres f. teres 0-1]
gi|311331637|gb|EFQ95588.1| hypothetical protein PTT_05982 [Pyrenophora teres f. teres 0-1]
Length = 909
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 55/101 (54%), Gaps = 3/101 (2%)
Query: 372 FKSCSALLEKLMKHKHGWV---FNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
K C +++ +L+K K+ V F PVD L + Y II+ PMD GT++ L Y+
Sbjct: 546 LKFCESVITELLKPKYTAVTYPFITPVDPVALNIPSYLKIIKKPMDFGTIEKNLKNGVYQ 605
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKW 469
S K+F D +L F N +NP+G V+ M +L +FE W
Sbjct: 606 SAKDFYADAQLVFQNCYKFNPEGDAVNQMGHKLEDLFESLW 646
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 3/91 (3%)
Query: 378 LLEKLM---KHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFA 434
LLE++ K K F PVD LG+ +Y I++HPMDL T++++L + Y ++F
Sbjct: 347 LLERIRNTKKIKVSLAFKDPVDPHALGIPNYPEIVKHPMDLSTMESKLKEKKYNYVRDFM 406
Query: 435 EDVRLTFHNAMTYNPKGQDVHIMAEQLLKIF 465
D+ N+ +N K V L F
Sbjct: 407 ADLDQMITNSELFNNKQHPVTQAGYNLRAYF 437
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 49/88 (55%), Gaps = 10/88 (11%)
Query: 537 PAPKKP-------KAKDPHKRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQ- 588
P P KP KAK P +++ +KQ++S + +L + VQII+ L
Sbjct: 742 PPPAKPMKSSGVKKAKAPAP--LSFAQKQEISEGISTLGDLDMRRAVQIIRNGCPHLANV 799
Query: 589 HDDEIEVDIDSVDAETLWELDRFVTNYK 616
+DDE+E+D++ ++ +TL EL RF+ + +
Sbjct: 800 NDDEMELDMEDINDDTLRELLRFIKSLR 827
>gi|254566451|ref|XP_002490336.1| Protein involved in transcription initiation at TATA-containing
promoters [Komagataella pastoris GS115]
gi|238030132|emb|CAY68055.1| Protein involved in transcription initiation at TATA-containing
promoters [Komagataella pastoris GS115]
gi|328350730|emb|CCA37130.1| Bromodomain-containing factor 1 [Komagataella pastoris CBS 7435]
Length = 640
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 58/101 (57%), Gaps = 3/101 (2%)
Query: 372 FKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
+ C+ ++++LM KH + F PVD L YF I++ PMDLGT++ +L + Y+
Sbjct: 294 LRFCNQVMKELMSKKHQNYSFPFLQPVDPVALDCPTYFDIVKEPMDLGTIQAKLANSEYE 353
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKW 469
+ +F +VRL F N +NP+G V++M + +F +W
Sbjct: 354 NADQFEREVRLVFTNCYKFNPEGSPVNVMGHTMENVFNKEW 394
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 43/78 (55%), Gaps = 4/78 (5%)
Query: 391 FNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPK 450
F PVD + LG+ Y+ I+ PMDL T++ +++ + Y+SP ED L N +N
Sbjct: 152 FLLPVDTEKLGIPLYYNYIKRPMDLSTIERKISVSAYESPDIIVEDFNLMVDNCRKFN-- 209
Query: 451 GQDVHI--MAEQLLKIFE 466
G+D I MA+ + FE
Sbjct: 210 GEDTPITRMAKNIQASFE 227
>gi|424513402|emb|CCO66024.1| predicted protein [Bathycoccus prasinos]
Length = 964
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 59/106 (55%), Gaps = 12/106 (11%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLN----------KNW 426
A+L++LM ++ + F VD L + DY II HPMD GT+ RL +
Sbjct: 539 AILQRLMSDRNAFPFLEKVDPIALDIPDYLDIISHPMDFGTIFKRLEPEDEHGVPLETTY 598
Query: 427 Y--KSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWV 470
Y P +FA DVRL F NA TYN + V++ AE+L ++FE +WV
Sbjct: 599 YTDSDPSKFANDVRLVFANAFTYNKPSELVYVQAEKLAQLFEREWV 644
>gi|371927839|pdb|4A9E|A Chain A, N-Terminal Bromodomain Of Human Brd2 With
3-Methyl-1,2,3,4- Tetrahydroquinazolin-2-One
gi|371927840|pdb|4A9E|B Chain B, N-Terminal Bromodomain Of Human Brd2 With
3-Methyl-1,2,3,4- Tetrahydroquinazolin-2-One
gi|371927841|pdb|4A9E|C Chain C, N-Terminal Bromodomain Of Human Brd2 With
3-Methyl-1,2,3,4- Tetrahydroquinazolin-2-One
gi|371927842|pdb|4A9F|A Chain A, N-Terminal Bromodomain Of Human Brd2 With
1-Methylpyrrolidin-2-One
gi|371927843|pdb|4A9F|B Chain B, N-Terminal Bromodomain Of Human Brd2 With
1-Methylpyrrolidin-2-One
gi|371927844|pdb|4A9F|C Chain C, N-Terminal Bromodomain Of Human Brd2 With
1-Methylpyrrolidin-2-One
gi|371927869|pdb|4A9H|A Chain A, N-Terminal Bromodomain Of Human Brd2 With
1-(2-Methyl-1,2,3, 4-Tetrahydroquinolin-1-Yl)ethan-1-One
gi|371927870|pdb|4A9H|B Chain B, N-Terminal Bromodomain Of Human Brd2 With
1-(2-Methyl-1,2,3, 4-Tetrahydroquinolin-1-Yl)ethan-1-One
gi|371927871|pdb|4A9H|C Chain C, N-Terminal Bromodomain Of Human Brd2 With
1-(2-Methyl-1,2,3, 4-Tetrahydroquinolin-1-Yl)ethan-1-One
gi|371927872|pdb|4A9I|A Chain A, N-Terminal Bromodomain Of Human Brd2 With
3-Methyl-1,2,3,4- Tetrahydroquinazolin-2-One
gi|371927873|pdb|4A9I|B Chain B, N-Terminal Bromodomain Of Human Brd2 With
3-Methyl-1,2,3,4- Tetrahydroquinazolin-2-One
gi|371927874|pdb|4A9I|C Chain C, N-Terminal Bromodomain Of Human Brd2 With
3-Methyl-1,2,3,4- Tetrahydroquinazolin-2-One
gi|371927875|pdb|4A9J|A Chain A, N-Terminal Bromodomain Of Human Brd2 With N-(4-
Hydroxyphenyl)acetamide
gi|371927876|pdb|4A9J|B Chain B, N-Terminal Bromodomain Of Human Brd2 With N-(4-
Hydroxyphenyl)acetamide
gi|371927877|pdb|4A9J|C Chain C, N-Terminal Bromodomain Of Human Brd2 With N-(4-
Hydroxyphenyl)acetamide
gi|374977910|pdb|4A9M|A Chain A, N-Terminal Bromodomain Of Human Brd2 With
N-Cyclopentyl-5-(
3,5-Dimethyl-1,2-Oxazol-4-Yl)-2-Methylbenzene-1-
Sulfonamide
gi|374977911|pdb|4A9M|B Chain B, N-Terminal Bromodomain Of Human Brd2 With
N-Cyclopentyl-5-(
3,5-Dimethyl-1,2-Oxazol-4-Yl)-2-Methylbenzene-1-
Sulfonamide
gi|374977912|pdb|4A9M|C Chain C, N-Terminal Bromodomain Of Human Brd2 With
N-Cyclopentyl-5-(
3,5-Dimethyl-1,2-Oxazol-4-Yl)-2-Methylbenzene-1-
Sulfonamide
gi|374977913|pdb|4A9N|A Chain A, N-Terminal Bromodomain Of Human Brd2 With
N-Cyclopropyl-5-(
3,5-Dimethyl-1,2-Oxazol-4-Yl)-2-Methylbenzene-1-
Sulfonamide
gi|374977914|pdb|4A9N|B Chain B, N-Terminal Bromodomain Of Human Brd2 With
N-Cyclopropyl-5-(
3,5-Dimethyl-1,2-Oxazol-4-Yl)-2-Methylbenzene-1-
Sulfonamide
gi|374977915|pdb|4A9N|C Chain C, N-Terminal Bromodomain Of Human Brd2 With
N-Cyclopropyl-5-(
3,5-Dimethyl-1,2-Oxazol-4-Yl)-2-Methylbenzene-1-
Sulfonamide
gi|374977916|pdb|4A9O|A Chain A, N-Terminal Bromodomain Of Human Brd2 With 5
Ethyl-3-Methyl- 4-Phenyl-1,2-Oxazole
gi|374977917|pdb|4A9O|B Chain B, N-Terminal Bromodomain Of Human Brd2 With 5
Ethyl-3-Methyl- 4-Phenyl-1,2-Oxazole
gi|374977918|pdb|4A9O|C Chain C, N-Terminal Bromodomain Of Human Brd2 With 5
Ethyl-3-Methyl- 4-Phenyl-1,2-Oxazole
gi|383875671|pdb|4ALH|A Chain A, N-Terminal Bromodomain Of Human Brd2 With 3,5 Dimethyl-4-
Phenyl-1,2-Oxazole
gi|383875672|pdb|4ALH|B Chain B, N-Terminal Bromodomain Of Human Brd2 With 3,5 Dimethyl-4-
Phenyl-1,2-Oxazole
gi|383875673|pdb|4ALH|C Chain C, N-Terminal Bromodomain Of Human Brd2 With 3,5 Dimethyl-4-
Phenyl-1,2-Oxazole
gi|393715366|pdb|4ALG|A Chain A, N-Terminal Bromodomain Of Human Brd2 With Ibet-151
Length = 154
Score = 81.3 bits (199), Expect = 2e-12, Method: Composition-based stats.
Identities = 40/98 (40%), Positives = 54/98 (55%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L KH+ W F PVD LGL DY II+ PMD+GT+K RL N+Y + E +D
Sbjct: 40 VMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDF 99
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
F N YN D+ +MA+ L KIF K + E
Sbjct: 100 NTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVASMPQE 137
>gi|47201045|emb|CAF89147.1| unnamed protein product [Tetraodon nigroviridis]
Length = 378
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 50/81 (61%), Gaps = 3/81 (3%)
Query: 372 FKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
+ C+ +L++L+ KH W F PVD +LGLHDY II+ PMDL T+K +++ Y
Sbjct: 250 LRYCNGVLKELLSKKHAGYAWPFYKPVDASSLGLHDYHDIIKQPMDLSTIKRKMDNREYL 309
Query: 429 SPKEFAEDVRLTFHNAMTYNP 449
++FA DVRL F N YNP
Sbjct: 310 DSQQFAADVRLMFSNCYKYNP 330
>gi|348688432|gb|EGZ28246.1| hypothetical protein PHYSODRAFT_470076 [Phytophthora sojae]
Length = 2182
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 61/98 (62%), Gaps = 7/98 (7%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNK-NWYKSPKE--- 432
++ KL K G +F PVDV+ + DY I +PMDLGTV TR+ + ++Y P
Sbjct: 95 GIVTKLTKEPGGDIFEHPVDVEEVP--DYLNFITNPMDLGTVATRIGRESYYVGPSATSL 152
Query: 433 FAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWV 470
FA DVRL F+N TYN +G D+ +A++LL+ FE KW+
Sbjct: 153 FASDVRLVFNNCKTYNAEGSDIWRVADELLRCFE-KWL 189
>gi|301117486|ref|XP_002906471.1| chromodomain-helicase-DNA-binding protein, putative [Phytophthora
infestans T30-4]
gi|262107820|gb|EEY65872.1| chromodomain-helicase-DNA-binding protein, putative [Phytophthora
infestans T30-4]
Length = 2158
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 59/98 (60%), Gaps = 7/98 (7%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNK-NWYKSPKE--- 432
++ KL K G +F PVDV+ + DY I +PMDLGT+ TRL + ++Y P
Sbjct: 107 GIVTKLTKEMGGDIFEHPVDVEEVP--DYLNFITNPMDLGTISTRLGRESYYIGPSAVSL 164
Query: 433 FAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWV 470
FA DVRL F N TYN +G D+ +A +LL+ FE KW+
Sbjct: 165 FASDVRLVFQNCKTYNAEGSDIWRVAAELLRTFE-KWI 201
>gi|1916930|gb|AAB53050.1| CREB-binding protein homolog [Drosophila melanogaster]
Length = 3190
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 54/89 (60%), Gaps = 1/89 (1%)
Query: 379 LEKLMKHKHGWV-FNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
LEKL + + V F PVD + LG+ DYF I++ PMDLGT++T + Y P E+ +DV
Sbjct: 1710 LEKLYRQEPESVPFRYPVDPQALGIPDYFEIVKKPMDLGTIRTNIQNGKYSDPWEYVDDV 1769
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFE 466
L F NA YNPK V+ +L ++FE
Sbjct: 1770 WLMFDNAWLYNPKTSRVYRYCTKLSEVFE 1798
>gi|196014713|ref|XP_002117215.1| hypothetical protein TRIADDRAFT_61269 [Trichoplax adhaerens]
gi|190580180|gb|EDV20265.1| hypothetical protein TRIADDRAFT_61269 [Trichoplax adhaerens]
Length = 1478
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 58/96 (60%), Gaps = 5/96 (5%)
Query: 356 QAGNELAHGFGTGSKI---FKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHP 412
+AG + + F GS++ K C L++ L +H+ W F PVD KN + DY+ I+++P
Sbjct: 1339 RAGAKRSASFSEGSRLSTELKKCHELIKDLEEHRDSWPFLQPVD-KN-KVPDYYEIVKNP 1396
Query: 413 MDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYN 448
MD T+K +L+ YK P+EFA DVRL F N YN
Sbjct: 1397 MDFQTIKKKLSSIRYKDPREFATDVRLVFINCAEYN 1432
>gi|146181135|ref|XP_001022211.2| Bromodomain containing protein [Tetrahymena thermophila]
gi|146144265|gb|EAS01966.2| Bromodomain containing protein [Tetrahymena thermophila SB210]
Length = 840
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 59/95 (62%)
Query: 372 FKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPK 431
+ C ++L++L K ++ F VD DY+ IIR PMDL V++ L + +Y++
Sbjct: 93 IRVCFSILQQLKKSENAGPFLQKVDALAQQCPDYYKIIRDPMDLSKVESNLKQGYYQTTL 152
Query: 432 EFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFE 466
+FA+DVR ++N+ TYN KG ++ M E++ ++FE
Sbjct: 153 QFADDVRKIWNNSFTYNQKGSQIYKMTEEMSRLFE 187
>gi|340501220|gb|EGR28026.1| hypothetical protein IMG5_184560 [Ichthyophthirius multifiliis]
Length = 288
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 122/274 (44%), Gaps = 46/274 (16%)
Query: 372 FKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPK 431
K C +L++L K+++ F VD +Y+ II PMDL ++ L N Y++
Sbjct: 50 MKQCMVILQRLKKNENAIPFLYRVDTIQQNCPNYYQIITEPMDLSQIELNLKLNQYQTKS 109
Query: 432 EFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEMGFH 491
+FA DV+ + N+ YNPKG ++ M ++ FE + IE+
Sbjct: 110 QFAADVKKIWRNSFIYNPKGSQIYYMTVKMSAFFEKLFSQIEN----------------- 152
Query: 492 TPTSRKAPPLPPPLDMRRILDRSESITHPMDSRLKPISTTPSSRTPAPKKPKAKDPHKRD 551
P + + + I+ ++ K ++ + T D
Sbjct: 153 ----------ISPRRINQYQNNYNKISQNINLLTKQVNGLAKTETKI-------DKMNIP 195
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDE-IEVDIDSVDAETLWELDR 610
+T +EK++L TN+++L E L+ I I++ N QH+ E IE DID++ + +L++
Sbjct: 196 LTMNEKKQLGTNIRNLAPEDLNGIWSIVQDDN----QHNSEVIEFDIDTLPIKKARKLEQ 251
Query: 611 FVTNYKKSL----SKNKRKAELANQARAVAQQNV 640
+V K+ L KNK ++ NQ Q+ +
Sbjct: 252 YV---KQKLLEYTKKNKGGKQIQNQRNVFFQKQI 282
>gi|156383389|ref|XP_001632816.1| predicted protein [Nematostella vectensis]
gi|156219878|gb|EDO40753.1| predicted protein [Nematostella vectensis]
Length = 1451
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 64/124 (51%), Gaps = 18/124 (14%)
Query: 361 LAHGFGTGSKIFKSCSAL-----------------LEKLMKHK-HGWVFNAPVDVKNLGL 402
LA+ F FKS S L LEKL K + F +PVD K LG
Sbjct: 643 LAYSFLHNYLEFKSVSCLEIALFLPEELRLALMPTLEKLYKQEPESLPFRSPVDPKLLGC 702
Query: 403 HDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLL 462
DYF I+R+PMDL T+K +L+ YK+P E+ +DV L F NA YN K V+ +L
Sbjct: 703 LDYFEIVRNPMDLSTIKRKLDNGQYKNPWEYCDDVWLMFDNAWLYNRKTSRVYKYCTKLS 762
Query: 463 KIFE 466
++FE
Sbjct: 763 EVFE 766
>gi|159795469|pdb|2RFJ|A Chain A, Crystal Structure Of The Bromo Domain 1 In Human
Bromodomain Containing Protein, Testis Specific (Brdt)
gi|159795470|pdb|2RFJ|B Chain B, Crystal Structure Of The Bromo Domain 1 In Human
Bromodomain Containing Protein, Testis Specific (Brdt)
gi|159795471|pdb|2RFJ|C Chain C, Crystal Structure Of The Bromo Domain 1 In Human
Bromodomain Containing Protein, Testis Specific (Brdt)
gi|394986421|pdb|4FLP|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brdt
In Complex With The Inhibitor Jq1
gi|394986422|pdb|4FLP|B Chain B, Crystal Structure Of The First Bromodomain Of Human Brdt
In Complex With The Inhibitor Jq1
Length = 119
Score = 80.9 bits (198), Expect = 2e-12, Method: Composition-based stats.
Identities = 40/91 (43%), Positives = 51/91 (56%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+L+ L KH W F PVD L L DY+TII++PMDL T+K RL +Y E ED
Sbjct: 21 VLKDLWKHSFSWPFQRPVDAVKLQLPDYYTIIKNPMDLNTIKKRLENKYYAKASECIEDF 80
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F N YN G D+ +MA+ L K+F K
Sbjct: 81 NTMFSNCYLYNKPGDDIVLMAQALEKLFMQK 111
>gi|325180242|emb|CCA14645.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 215
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 59/96 (61%)
Query: 373 KSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKE 432
K CS +L+ + + F V+ + GL+DY +++ PMDLGT++ +L+K Y +
Sbjct: 7 KKCSDILDYFINLETTGPFRERVNWEEWGLYDYLQVVKVPMDLGTIRMKLSKGEYTKTAD 66
Query: 433 FAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
F +D+RL + N YN G D++I+AE+L + FED+
Sbjct: 67 FLKDMRLVWDNCKLYNQDGSDLYILAEELGRKFEDR 102
>gi|327350418|gb|EGE79275.1| transcription regulator BDF1 [Ajellomyces dermatitidis ATCC 18188]
Length = 943
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 56/101 (55%), Gaps = 3/101 (2%)
Query: 372 FKSCSALLEKLMKHKHGWV---FNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
K C +L++L K KH + F PVD L + Y +II+ PMDL TV+TRL Y+
Sbjct: 580 LKFCQEVLDELHKKKHEPIALPFYYPVDPVALNIPTYHSIIKKPMDLQTVQTRLQTGQYE 639
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKW 469
+ KE D+RL F N +N G + + L ++F++KW
Sbjct: 640 NAKEMEADIRLIFKNCYKFNIPGDPTYNAGKSLEEVFDNKW 680
Score = 47.4 bits (111), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 50/112 (44%), Gaps = 11/112 (9%)
Query: 366 GTGSKIFKSCSAL----LEKLMKHKHGW-------VFNAPVDVKNLGLHDYFTIIRHPMD 414
G GS +S + L L+ L++ G F PVD L + +Y II+ PMD
Sbjct: 364 GAGSDSLRSEAPLTTKQLKFLVRCIQGLKRVHDSRFFREPVDPVKLNIPNYPLIIKQPMD 423
Query: 415 LGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFE 466
L T++ +L Y S D L N++T+N V + +L + FE
Sbjct: 424 LRTIEEKLKSGSYASLAAVISDFDLMIDNSVTFNGPEHMVSVEGLRLKQNFE 475
Score = 42.4 bits (98), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQ-HDDEIEVDIDSVDAETLWELDR 610
+TY EKQ +S + SLP +++ ++II+ L + EIE+DID + E L L R
Sbjct: 795 VTYREKQIISHGISSLPEKRMTEALKIIQSNVPGLKDTKEAEIELDIDELPNEVLLVLLR 854
Query: 611 FVTNY 615
FV +
Sbjct: 855 FVKKH 859
>gi|219117946|ref|XP_002179758.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217408811|gb|EEC48744.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 2426
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 57/104 (54%), Gaps = 4/104 (3%)
Query: 375 CSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFA 434
C ++++L+ + GWVF+ VD LGL DYF +++HPM L VK +L Y FA
Sbjct: 1251 CLPVIQELIDDQFGWVFHDAVDPIALGLPDYFDVVKHPMHLELVKKKLENAIYCDTDSFA 1310
Query: 435 EDVRLTFHNAMTYNPKGQDVHIMAEQLL----KIFEDKWVVIES 474
DV L F NA+ YN + +V +A L +I+E IES
Sbjct: 1311 HDVELVFENAILYNGETSEVGELANSFLVKFAQIYEKLIAGIES 1354
>gi|302789912|ref|XP_002976724.1| hypothetical protein SELMODRAFT_28942 [Selaginella moellendorffii]
gi|300155762|gb|EFJ22393.1| hypothetical protein SELMODRAFT_28942 [Selaginella moellendorffii]
Length = 96
Score = 80.5 bits (197), Expect = 3e-12, Method: Composition-based stats.
Identities = 43/90 (47%), Positives = 55/90 (61%), Gaps = 1/90 (1%)
Query: 378 LLEKLMKH-KHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
+LE L + K GWVF PV L DY +I PMDLGTVK+R+ +Y SPK FA D
Sbjct: 1 VLEDLRNYSKEGWVFCQPVQSLWPELVDYTKVIEKPMDLGTVKSRVQSKYYSSPKGFARD 60
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIFE 466
VRLTF NA+ +N G H +A ++ + FE
Sbjct: 61 VRLTFDNAIRFNAAGSMYHKLALKMRQKFE 90
>gi|410075149|ref|XP_003955157.1| hypothetical protein KAFR_0A05870 [Kazachstania africana CBS 2517]
gi|372461739|emb|CCF56022.1| hypothetical protein KAFR_0A05870 [Kazachstania africana CBS 2517]
Length = 647
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 60/102 (58%), Gaps = 5/102 (4%)
Query: 372 FKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNW-Y 427
K CS ++++L K+ + F PVD + L YF ++ PMDLG++ +L+ NW Y
Sbjct: 280 MKFCSNIVKELTSKKYSSFNYPFLEPVDPVAMNLPTYFDFVKDPMDLGSIAKKLS-NWEY 338
Query: 428 KSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKW 469
S +F D+RL F+N +NP G V++M +L +IF +KW
Sbjct: 339 NSMDQFESDIRLVFNNCYAFNPDGTIVNMMGHRLEEIFNNKW 380
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%)
Query: 373 KSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKE 432
+ S ++ + + K F PVD+ L + Y+ I PMDL T++ +LN N Y +P+E
Sbjct: 110 RHASMAIKAVKRLKDAKPFLKPVDIVALNIPLYYNYIDRPMDLSTMEKKLNVNAYATPEE 169
Query: 433 FAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFE 466
D L HN + +N + + MA + FE
Sbjct: 170 IMNDFNLMVHNCIKFNGQTAAIAQMARNIQAAFE 203
>gi|320594031|gb|EFX06434.1| transcription regulator [Grosmannia clavigera kw1407]
Length = 867
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 61/102 (59%), Gaps = 6/102 (5%)
Query: 372 FKSCSALLEKLMKHKH----GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWY 427
F+ C +L++LMK +H W F PVD + + Y +I+ PMDLGT++T+LN Y
Sbjct: 556 FRFCEEVLKELMKQRHYETNHW-FLRPVDAVAMQIPTYHKVIKKPMDLGTMQTKLNLGEY 614
Query: 428 KSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKW 469
S K+F DV+L N +N G+ V+ A++L ++F+ KW
Sbjct: 615 NSAKDFESDVQLIIRNCRKFNGTGEVVN-AADRLEELFKAKW 655
Score = 42.7 bits (99), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 1/89 (1%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHD-YFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
+L + K K G F PV K L D Y + PMD+G ++ L ++ Y +F D
Sbjct: 334 VLASIKKTKVGNNFKDPVYKKWPFLWDSYVQRVAKPMDIGQIERNLRESVYTKHGDFIND 393
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIF 465
+ L F N++++N G V A+ L+ F
Sbjct: 394 LFLIFENSVSFNGLGNIVTDEAKSLVDNF 422
>gi|261199936|ref|XP_002626369.1| transcription regulator BDF1 [Ajellomyces dermatitidis SLH14081]
gi|239594577|gb|EEQ77158.1| transcription regulator BDF1 [Ajellomyces dermatitidis SLH14081]
gi|239607966|gb|EEQ84953.1| transcription regulator BDF1 [Ajellomyces dermatitidis ER-3]
Length = 898
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 56/101 (55%), Gaps = 3/101 (2%)
Query: 372 FKSCSALLEKLMKHKHGWV---FNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
K C +L++L K KH + F PVD L + Y +II+ PMDL TV+TRL Y+
Sbjct: 531 LKFCQEVLDELHKKKHEPIALPFYYPVDPVALNIPTYHSIIKKPMDLQTVQTRLQTGQYE 590
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKW 469
+ KE D+RL F N +N G + + L ++F++KW
Sbjct: 591 NAKEMEADIRLIFKNCYKFNIPGDPTYNAGKSLEEVFDNKW 631
Score = 47.0 bits (110), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 50/112 (44%), Gaps = 11/112 (9%)
Query: 366 GTGSKIFKSCSAL----LEKLMKHKHGW-------VFNAPVDVKNLGLHDYFTIIRHPMD 414
G GS +S + L L+ L++ G F PVD L + +Y II+ PMD
Sbjct: 315 GAGSDSLRSEAPLTTKQLKFLVRCIQGLKRVHDSRFFREPVDPVKLNIPNYPLIIKQPMD 374
Query: 415 LGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFE 466
L T++ +L Y S D L N++T+N V + +L + FE
Sbjct: 375 LRTIEEKLKSGSYASLAAVISDFDLMIDNSVTFNGPEHMVSVEGLRLKQNFE 426
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 9/71 (12%)
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDD-------EIEVDIDSVDAET 604
+TY EKQ +S + SLP +++ ++II+ L DD EIE+DID + E
Sbjct: 746 VTYREKQIISHGISSLPEKRMTEALKIIQSNVPGL--KDDAQDTKEAEIELDIDELPNEV 803
Query: 605 LWELDRFVTNY 615
L L RFV +
Sbjct: 804 LLVLLRFVKKH 814
>gi|303275083|ref|XP_003056841.1| bromodomain-containing protein [Micromonas pusilla CCMP1545]
gi|226461193|gb|EEH58486.1| bromodomain-containing protein [Micromonas pusilla CCMP1545]
Length = 854
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 51/103 (49%), Gaps = 4/103 (3%)
Query: 371 IFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNK----NW 426
+ + C +L K+K +F PVD +GL DYF II++PMD GTVK RL+
Sbjct: 246 LIRKCREVLTLTRKNKDARIFAMPVDPMKMGLPDYFDIIKNPMDFGTVKQRLDSKAAGTA 305
Query: 427 YKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKW 469
Y P EF DV LT N YN V M E + FE W
Sbjct: 306 YDHPMEFYRDVTLTLDNCRLYNKADSVVGTMGESVRADFEKHW 348
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 58/97 (59%), Gaps = 2/97 (2%)
Query: 539 PKKPKAKDPH-KRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVD 596
P + A +P RDMTY EKQ+L+ L LP +K +VQI+ +R L + D IE++
Sbjct: 489 PARAPASEPLPTRDMTYAEKQELTELLGELPEDKQAKVVQIVVERQKELGNAEGDLIEIN 548
Query: 597 IDSVDAETLWELDRFVTNYKKSLSKNKRKAELANQAR 633
I+ +D+ TLW+LDRF + K K +AE+ +A+
Sbjct: 549 IEELDSVTLWKLDRFARSCIKPKKKKPTQAEILLEAQ 585
>gi|76156262|gb|AAX27484.2| SJCHGC04977 protein [Schistosoma japonicum]
Length = 230
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 49/84 (58%)
Query: 381 KLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLT 440
+L K K W F PVD + L L DY II+HPMDLGT+K RLN +Y S E +D+
Sbjct: 42 RLFKEKIVWPFTKPVDHQRLNLPDYPKIIKHPMDLGTIKQRLNLKFYHSSSECLDDLFTM 101
Query: 441 FHNAMTYNPKGQDVHIMAEQLLKI 464
F N +N G DV MA +L +I
Sbjct: 102 FRNCYIFNKPGDDVVAMAMKLEQI 125
>gi|242064660|ref|XP_002453619.1| hypothetical protein SORBIDRAFT_04g009070 [Sorghum bicolor]
gi|241933450|gb|EES06595.1| hypothetical protein SORBIDRAFT_04g009070 [Sorghum bicolor]
Length = 378
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/166 (38%), Positives = 82/166 (49%), Gaps = 22/166 (13%)
Query: 230 LEIELDTVRSLVKRI-EAKEVQISGGVSNSGVLPV------SDVVDNGIKRGHSEVASVG 282
L ELD VR L KR+ EA E S LP+ VV+ G + H +
Sbjct: 203 LAGELDQVRVLSKRLKEAAEALAQREASEPAPLPLMVLPTQQQVVEAGYVQPHFSAGDMA 262
Query: 283 VPVTR--VGITRPSRPLNQ---LSISTVENSLGLSENVEKEKRTPKANQFYRNSEFLLAK 337
VP++ P R L Q L++S + N E EKEKRTPKANQ Y+NSEFLLAK
Sbjct: 263 VPMSAQVAAAVTPGRTLLQRRPLTVSVIHN-----EAFEKEKRTPKANQLYQNSEFLLAK 317
Query: 338 DKFPPAESNKKSKLNGKKQAGNEL-----AHGFGTGSKIFKSCSAL 378
D+ PPA+S+ + K K+ E+ HG G K +S S L
Sbjct: 318 DRIPPADSHGRKKSKHHKKKHREVRFDETPHGIGHQFKTDQSYSHL 363
>gi|159125309|gb|EDP50426.1| transcription regulator BDF1, putative [Aspergillus fumigatus
A1163]
Length = 832
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 57/102 (55%), Gaps = 3/102 (2%)
Query: 372 FKSCSALLEKLMKHKH-GWV--FNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
+ C +L++L K KH W F PVD L + Y +II+ PMDL TV+++L Y+
Sbjct: 478 LRFCQEVLDELHKPKHYNWAAPFYFPVDPVALNIPTYHSIIKKPMDLSTVQSKLKTGQYE 537
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWV 470
+ KEF D+R F N +N G ++ ++ +IFE+KW
Sbjct: 538 NAKEFEVDMRQIFKNCFKFNIPGDPTYMAGQRFQEIFENKWA 579
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 54/95 (56%), Gaps = 6/95 (6%)
Query: 379 LEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVR 438
++ L + + PVD + + Y II+HPMDLGT++ +L N YK+ + +D
Sbjct: 292 IQSLKRMNDARFYREPVDPIKMNIPHYPQIIKHPMDLGTIERKLKNNEYKTAQAVVDDFN 351
Query: 439 LTFHNAMTYNPKGQDVHIMAEQLLKI---FEDKWV 470
L NA+T+N G D H+++++ LK+ FE + +
Sbjct: 352 LMVQNAVTFN--GPD-HLVSQEGLKLKGTFEKQMM 383
>gi|70993850|ref|XP_751772.1| transcription regulator BDF1 [Aspergillus fumigatus Af293]
gi|66849406|gb|EAL89734.1| transcription regulator BDF1, putative [Aspergillus fumigatus
Af293]
Length = 832
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 57/102 (55%), Gaps = 3/102 (2%)
Query: 372 FKSCSALLEKLMKHKH-GWV--FNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
+ C +L++L K KH W F PVD L + Y +II+ PMDL TV+++L Y+
Sbjct: 478 LRFCQEVLDELHKPKHYNWAAPFYFPVDPVALNIPTYHSIIKKPMDLSTVQSKLKTGQYE 537
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWV 470
+ KEF D+R F N +N G ++ ++ +IFE+KW
Sbjct: 538 NAKEFEVDMRQIFKNCFKFNIPGDPTYMAGQRFQEIFENKWA 579
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 54/95 (56%), Gaps = 6/95 (6%)
Query: 379 LEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVR 438
++ L + + PVD + + Y II+HPMDLGT++ +L N YK+ + +D
Sbjct: 292 IQSLKRMNDARFYREPVDPIKMNIPHYPQIIKHPMDLGTIERKLKNNEYKTAQAVVDDFN 351
Query: 439 LTFHNAMTYNPKGQDVHIMAEQLLKI---FEDKWV 470
L NA+T+N G D H+++++ LK+ FE + +
Sbjct: 352 LMVQNAVTFN--GPD-HLVSQEGLKLKGTFEKQMM 383
>gi|380474446|emb|CCF45773.1| hypothetical protein CH063_14739 [Colletotrichum higginsianum]
Length = 367
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 72/137 (52%), Gaps = 5/137 (3%)
Query: 354 KKQAGNELAHGFGTGSKIFKSCSALLEKLMKHKHGWV-----FNAPVDVKNLGLHDYFTI 408
K+++ ++ G T K + C+ LL++++ W F PVD G+ DYF
Sbjct: 231 KRRSIVPVSDGEITTEKKVEFCADLLDRMLSGPGFWTRLVGPFKEPVDPVEDGVPDYFNK 290
Query: 409 IRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
++ PMDL TVK +++++ Y++ EFA DVR F N TY KG + E+ K FE+K
Sbjct: 291 VKKPMDLNTVKAKMSRHEYRTEDEFASDVRQIFENCYTYWTKGDPMWAACEKFQKTFEEK 350
Query: 469 WVVIESEYNREMRIGAD 485
+ + ++ MR D
Sbjct: 351 YAQMHKNISKMMREPVD 367
>gi|119500410|ref|XP_001266962.1| transcription regulator BDF1, putative [Neosartorya fischeri NRRL
181]
gi|119415127|gb|EAW25065.1| transcription regulator BDF1, putative [Neosartorya fischeri NRRL
181]
Length = 833
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 57/102 (55%), Gaps = 3/102 (2%)
Query: 372 FKSCSALLEKLMKHKH-GWV--FNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
+ C +L++L K KH W F PVD L + Y +II+ PMDL TV+++L Y+
Sbjct: 479 LRFCQEVLDELHKPKHYNWAAPFYFPVDPVALNIPTYHSIIKKPMDLSTVQSKLKTGQYE 538
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWV 470
+ KEF D+R F N +N G ++ ++ +IFE+KW
Sbjct: 539 NAKEFEVDMRQIFKNCFKFNIPGDPTYMAGQRFQEIFENKWA 580
>gi|268578307|ref|XP_002644136.1| Hypothetical protein CBG04495 [Caenorhabditis briggsae]
Length = 876
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 61/112 (54%), Gaps = 3/112 (2%)
Query: 366 GTGSKIFKSCSALLEKL--MKHK-HGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G ++ K C LL ++ +K+K VF PVD L + DY ++++PMDL T+K +L
Sbjct: 338 GKQAEWQKFCVRLLNEMHSLKNKSFAQVFYVPVDPIKLKIADYLDVVKNPMDLQTMKKKL 397
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIES 474
+ Y P+EF D+ L N YNPKG V+ A L +FE +W + S
Sbjct: 398 DHKQYAEPEEFVADMNLMIDNCCLYNPKGSSVYQNALDLKALFEQRWKLFPS 449
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 61/122 (50%), Gaps = 2/122 (1%)
Query: 342 PAESNKKSKLNGKKQAGNELAHGFGT--GSKIFKSCSALLEKLMKHKHGWVFNAPVDVKN 399
P ES ++ + G Q E G T + + ++++ +KHKH W F PV+
Sbjct: 41 PWESPRQEPVGGVVQPRTEPPKGKPTRHTNCLDHLLFTVIKEAVKHKHSWPFQEPVNAVA 100
Query: 400 LGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAE 459
L + DY I PMDL T++ RL ++Y S + +D+ F N T+N D++IM E
Sbjct: 101 LAIPDYHKTITRPMDLRTIEKRLRNSYYWSVDDAIKDLNTLFQNCKTFNDNNDDIYIMCE 160
Query: 460 QL 461
+
Sbjct: 161 NV 162
>gi|440800738|gb|ELR21773.1| bromodomain domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 904
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 55/109 (50%)
Query: 371 IFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSP 430
I C ++ L+ W FN PVD LG+ YF II+ PMD GT+ +L Y+
Sbjct: 443 ILLECKKIMTSLISDTDAWPFNQPVDPVALGIPTYFDIIKEPMDFGTINQKLKNGKYEVL 502
Query: 431 KEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNRE 479
+F DV L F NA+ +N D+ A++L +FE + V + + E
Sbjct: 503 AQFERDVHLVFANALLFNEPDSDIGYWAKKLRGLFERRLVRVHNMLKEE 551
>gi|238485866|ref|XP_002374171.1| transcription regulator BDF1, putative [Aspergillus flavus
NRRL3357]
gi|317144623|ref|XP_001820248.2| transcription regulator BDF1 [Aspergillus oryzae RIB40]
gi|220699050|gb|EED55389.1| transcription regulator BDF1, putative [Aspergillus flavus
NRRL3357]
Length = 812
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 55/101 (54%), Gaps = 3/101 (2%)
Query: 372 FKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
K C +L++L K KH F PVD L + Y +II+ PMDL T++T+L Y+
Sbjct: 455 LKFCQEVLDELHKPKHFNYAVPFYQPVDPVALNIPTYHSIIKKPMDLSTMQTKLKTGQYE 514
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKW 469
+ KEF D+RL F N +N G ++ ++ +IF KW
Sbjct: 515 NAKEFELDMRLIFKNCFKFNIPGDPTYLAGQKFEEIFNSKW 555
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 53/95 (55%), Gaps = 6/95 (6%)
Query: 379 LEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVR 438
++ L + + PVD + + + Y IIR PMDLGT++ RL N YKS K +D
Sbjct: 269 IQSLKRMHDSRFYREPVDPEKMNIPHYPQIIRQPMDLGTIERRLKNNEYKSVKAVVDDFN 328
Query: 439 LTFHNAMTYNPKGQDVHIMAEQLLKI---FEDKWV 470
L N++T+N G D HI+A++ K+ FE + +
Sbjct: 329 LMVQNSLTFN--GPD-HIVAQEGQKLKSTFEKQMI 360
>gi|401827500|ref|XP_003887842.1| chromatin remodeling bromodomain-containing transcription factor
[Encephalitozoon hellem ATCC 50504]
gi|392998849|gb|AFM98861.1| chromatin remodeling bromodomain-containing transcription factor
[Encephalitozoon hellem ATCC 50504]
Length = 370
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 56/96 (58%)
Query: 372 FKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPK 431
K CS +L ++ ++ + F PVD LG+ DY I+HPMDL T++ +L+ Y P+
Sbjct: 17 LKYCSQVLTRIKRNSNAPPFLEPVDPVKLGIPDYPEKIKHPMDLSTIRKKLDAKEYSGPE 76
Query: 432 EFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFED 467
F D++L F+N TYNP G VH M + L ++ D
Sbjct: 77 GFDSDMKLMFNNCYTYNPPGTVVHDMGKALESVYND 112
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 104/244 (42%), Gaps = 42/244 (17%)
Query: 372 FKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
++ CS +L L++ KH W F PVD +L + Y+++I+ PMD+ T++ +L + Y
Sbjct: 154 YEFCSEVLNDLVRPKHKAYNWPFLEPVD-GDL-VPGYYSVIKEPMDMQTMRNKLEQRKYH 211
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEM 488
S +EF D+ L N +N G +V+ ++ E I A E
Sbjct: 212 SVEEFGRDLELIVENCKKFNAPGTEVYACGQEF-----------------ERAIKAHMEK 254
Query: 489 GFHTPTSRKAPPLPPPLDMRRILDRSESITHPMDSRLKPISTTPSSRTPAPKKPKAKDPH 548
+ L R+++ + I ++ PSSR
Sbjct: 255 TLPADIKSRISELK-----RKVVSYTREIRMLESKLMEQTGEAPSSRA------------ 297
Query: 549 KRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWEL 608
+ E+ + + ++ E+ +N+ +I+ K + F +DEIEVD+ ++ + E+
Sbjct: 298 ---YSLSERVSIGNAILNMTKEQTENVAKIVLKNGAGEFVENDEIEVDMRTIPDHVVEEI 354
Query: 609 DRFV 612
D ++
Sbjct: 355 DMYI 358
>gi|308810150|ref|XP_003082384.1| Zcwcc3-prov protein (ISS) [Ostreococcus tauri]
gi|116060852|emb|CAL57330.1| Zcwcc3-prov protein (ISS) [Ostreococcus tauri]
Length = 1083
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 59/89 (66%), Gaps = 1/89 (1%)
Query: 382 LMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKS-PKEFAEDVRLT 440
+M +K+ ++F PVD + DYF +I++PMDLGT+ T+L K Y++ P +A DVRL
Sbjct: 589 IMTNKNAYMFLKPVDPVYWEIPDYFDVIKNPMDLGTIMTKLEKREYENQPSAYAADVRLV 648
Query: 441 FHNAMTYNPKGQDVHIMAEQLLKIFEDKW 469
+ NAMTYN + + V+ MA + + FE +W
Sbjct: 649 WSNAMTYNKEEEPVYKMARIMSREFEYQW 677
>gi|340500772|gb|EGR27626.1| hypothetical protein IMG5_192810 [Ichthyophthirius multifiliis]
Length = 319
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 109/238 (45%), Gaps = 33/238 (13%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
LL L KH F PV+ + G DY II HPMDL T++ L +N Y+S K+F +D+
Sbjct: 60 LLTCLQKHPQAGPFLQPVNPQLQGCPDYLQIITHPMDLSTIQNNLRQNKYRSDKQFLQDI 119
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEMGFHTPTSRK 497
R + N+ YNPK ++ + Q+ + FE K I N
Sbjct: 120 RQIWSNSYIYNPKSSYLYQVTLQMDQFFEQKVQEIFQNKNNN------------------ 161
Query: 498 APPLPPPLDMRRILDRSESITHPMDSR---LKPISTTPSSRTPAPKKPKAKDPHKRDMTY 554
P +++ +++ + M+S+ LK + S K+ K P M
Sbjct: 162 -----PLVNLHNQVNQLQKEISGMNSKSKTLKAFNNQNLSYFSTQKQQKINTP----MNP 212
Query: 555 DEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWELDRFV 612
+EK+ L N+ LP++ + +I+K+ ++ + ++ DID++ + EL+++V
Sbjct: 213 NEKKTLKQNILKLPADAYTGVWEILKQECNT---RNQQLSFDIDALSVRKVRELEQYV 267
>gi|384499244|gb|EIE89735.1| hypothetical protein RO3G_14446 [Rhizopus delemar RA 99-880]
Length = 570
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 56/101 (55%), Gaps = 3/101 (2%)
Query: 372 FKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
+K C++ +++ K K+ W F PVD G DY+ II+HPMD+ T++ + Y
Sbjct: 154 YKHCASAIKEFKKPKYAHLTWPFERPVDAAAWGATDYYDIIQHPMDMSTIENKFKNAEYT 213
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKW 469
+ +F +D +L F N YNP +VH++ ++ + F+ W
Sbjct: 214 NEDQFYDDYKLMFSNCYKYNPPHHEVHLLGKKFEEDFDKHW 254
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Query: 379 LEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVR 438
L KLMKH F PVD + DYF II+HPMDL T++T+LN Y+S +EF DV
Sbjct: 44 LTKLMKHPCAGPFLQPVDPVFFNIPDYFDIIKHPMDLSTIQTKLNN--YQSKEEFIADVE 101
Query: 439 LTFHNAMTYNPKGQDVHIMAEQLLKIFE 466
L N YN V A +L K F+
Sbjct: 102 LMLDNCYLYNNATDPVCDQARELEKAFK 129
>gi|145510564|ref|XP_001441215.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124408454|emb|CAK73818.1| unnamed protein product [Paramecium tetraurelia]
Length = 489
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 50/82 (60%)
Query: 373 KSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKE 432
K +L+ L K K +F+ PVD K G++DY+ I++ PMD GTVK +LN N YK+ KE
Sbjct: 383 KVAKKVLQILWKAKGAQLFHNPVDEKKYGINDYYDIVKRPMDFGTVKQKLNANQYKNCKE 442
Query: 433 FAEDVRLTFHNAMTYNPKGQDV 454
F D+ L F N + YN D+
Sbjct: 443 FYHDIMLVFDNCILYNGSENDI 464
>gi|425766265|gb|EKV04889.1| hypothetical protein PDIG_86900 [Penicillium digitatum PHI26]
gi|425778995|gb|EKV17090.1| hypothetical protein PDIP_32890 [Penicillium digitatum Pd1]
Length = 807
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 55/102 (53%), Gaps = 3/102 (2%)
Query: 372 FKSCSALLEKLMKHKH-GWV--FNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
+ C +L++L K KH WV F PVD L + Y ++I+ PMDL T +++L Y+
Sbjct: 459 LRFCQEVLDELHKQKHYSWVMPFYYPVDPVALNIPTYHSVIKKPMDLSTAQSKLKTGQYE 518
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWV 470
+ KEF DVRL F N +N G I ++ +IF KW
Sbjct: 519 NAKEFENDVRLIFKNCYRFNIPGDPTFICGQRAEEIFNAKWA 560
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 56/106 (52%), Gaps = 14/106 (13%)
Query: 360 ELAHGFGTGSKIFKSCSALLEKLMKHKH-GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTV 418
++ H F I KS ++L K H + PVD + + Y +II HPMDLGT+
Sbjct: 266 KMQHKF-----ILKSLTSL-----KRMHDARFYKEPVDAVKMNIPQYHSIITHPMDLGTM 315
Query: 419 KTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKI 464
+ +L N Y SPK A+D L +N +N G D H++ ++ +K+
Sbjct: 316 ERKLKNNQYSSPKAVADDFALMVNNTTIFN--GAD-HLVTQEGIKL 358
>gi|397579592|gb|EJK51267.1| hypothetical protein THAOC_29580 [Thalassiosira oceanica]
Length = 2323
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 52/79 (65%)
Query: 391 FNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPK 450
F PVD K+LGL+DY IIR+PMDLGTVK RLN+ Y + + AEDVR + N YNP+
Sbjct: 34 FRDPVDWKSLGLYDYPRIIRNPMDLGTVKRRLNEGKYSTVYDVAEDVRRIWKNCCKYNPE 93
Query: 451 GQDVHIMAEQLLKIFEDKW 469
D + + + + FE+K+
Sbjct: 94 DSDFNKLGRSMHEKFEEKY 112
>gi|443895563|dbj|GAC72909.1| hypothetical protein PANT_7c00331 [Pseudozyma antarctica T-34]
Length = 780
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 69/127 (54%), Gaps = 17/127 (13%)
Query: 341 PPAESNKKSKLNGKKQAGNELAHGFGTGSKIFKSCSALLEKLMKHKHGWVFNAPVDVKNL 400
PP++ +++SK +KQA + S LL ++ H HG +F+AP+ K
Sbjct: 660 PPSQVSERSKAAKRKQA---------------QVLSMLLTEVSNHTHGNLFHAPI--KEQ 702
Query: 401 GLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQ 460
DY+T+I+ P+D+ T+K R+ + +PK+ + + L F N++ YN G +VH MA +
Sbjct: 703 DAPDYYTLIKQPLDIKTIKARIKEGSIGTPKQLRKALNLMFANSLLYNRPGTEVHRMATE 762
Query: 461 LLKIFED 467
+ ED
Sbjct: 763 MSAASED 769
>gi|358338689|dbj|GAA31548.2| E1A/CREB-binding protein [Clonorchis sinensis]
Length = 2085
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 61/118 (51%), Gaps = 2/118 (1%)
Query: 370 KIFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKS 429
++ +S LLE++ K F APVD L + DYF +I+ PMDL T++ L YK
Sbjct: 687 ELLRSFLQLLEEVYNDKFAEPFRAPVDPVMLHIPDYFEVIKEPMDLTTIRNNLEDGNYKD 746
Query: 430 PKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYE 487
P E E RL F+NA YN K V+ M +L ++F+ + + + G DYE
Sbjct: 747 PWEVVEHFRLMFNNAWLYNKKNSKVYKMCTKLAELFQSR--IDQVMQGLGFCCGQDYE 802
>gi|440789954|gb|ELR11245.1| bromodomain domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 119
Score = 79.3 bits (194), Expect = 7e-12, Method: Composition-based stats.
Identities = 37/88 (42%), Positives = 53/88 (60%)
Query: 374 SCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEF 433
+ + LL L +H++ W F PVD LG+ DY II+ PMDL T++ +L Y+ F
Sbjct: 5 TATELLTNLARHRYAWPFAHPVDYVALGVPDYPMIIQRPMDLATIRDKLEAGTYELVSAF 64
Query: 434 AEDVRLTFHNAMTYNPKGQDVHIMAEQL 461
+DV+L + NA YNP G DV IMA+ +
Sbjct: 65 LDDVQLVWSNAKVYNPPGSDVVIMADAM 92
>gi|83768107|dbj|BAE58246.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391871763|gb|EIT80920.1| transcription initiation factor TFIID, subunit BDF1 [Aspergillus
oryzae 3.042]
Length = 762
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 55/101 (54%), Gaps = 3/101 (2%)
Query: 372 FKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
K C +L++L K KH F PVD L + Y +II+ PMDL T++T+L Y+
Sbjct: 405 LKFCQEVLDELHKPKHFNYAVPFYQPVDPVALNIPTYHSIIKKPMDLSTMQTKLKTGQYE 464
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKW 469
+ KEF D+RL F N +N G ++ ++ +IF KW
Sbjct: 465 NAKEFELDMRLIFKNCFKFNIPGDPTYLAGQKFEEIFNSKW 505
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 53/95 (55%), Gaps = 6/95 (6%)
Query: 379 LEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVR 438
++ L + + PVD + + + Y IIR PMDLGT++ RL N YKS K +D
Sbjct: 219 IQSLKRMHDSRFYREPVDPEKMNIPHYPQIIRQPMDLGTIERRLKNNEYKSVKAVVDDFN 278
Query: 439 LTFHNAMTYNPKGQDVHIMAEQLLKI---FEDKWV 470
L N++T+N G D HI+A++ K+ FE + +
Sbjct: 279 LMVQNSLTFN--GPD-HIVAQEGQKLKSTFEKQMI 310
>gi|409051415|gb|EKM60891.1| hypothetical protein PHACADRAFT_247110 [Phanerochaete carnosa
HHB-10118-sp]
Length = 783
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 57/102 (55%), Gaps = 5/102 (4%)
Query: 372 FKSCSALLEKLMKHKHGW----VFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWY 427
K C +L L K H W F PVD L + Y +I+ PMDL T++ +L+ + Y
Sbjct: 427 LKFCDKVLRDLNKKTH-WNIAHPFYEPVDWVKLEIPSYPKLIKKPMDLSTMRRKLDNSEY 485
Query: 428 KSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKW 469
+PKEF +D +L N T+NP G V+ ++L ++F++KW
Sbjct: 486 STPKEFNDDFKLIIRNCFTFNPAGTPVNTAGQELQQLFDEKW 527
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 49/106 (46%), Gaps = 12/106 (11%)
Query: 373 KSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNW------ 426
+ C + + L K K F PVDV L + Y I++ PMD T++ +L +
Sbjct: 231 RFCVSTIRTLKKMKAAAPFLKPVDVVALNIPHYPQIVKQPMDFSTIERKLQSSTPQKSDP 290
Query: 427 ------YKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFE 466
Y EF DVRL F N + +N + +++Q+ ++F+
Sbjct: 291 NPSNPRYHHADEFIADVRLIFSNCLAFNGTDHFITQLSKQVEEVFD 336
Score = 40.4 bits (93), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 540 KKPKAKDPHKRD-MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDID 598
KKP K D +++++K++LS + L +KL+ ++QII + + +EIE++ID
Sbjct: 623 KKPSKKPIEDNDVLSFEQKKELSDTIGKLDGQKLEKVIQIIHEGVPEIRDSTEEIELEID 682
Query: 599 SVDAETLWELDRFV 612
++ A L +L FV
Sbjct: 683 TLPAAVLTKLYNFV 696
>gi|347963028|ref|XP_311133.5| AGAP000029-PA [Anopheles gambiae str. PEST]
gi|333467394|gb|EAA06516.6| AGAP000029-PA [Anopheles gambiae str. PEST]
Length = 4121
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 54/89 (60%), Gaps = 1/89 (1%)
Query: 379 LEKLMKHKHGWV-FNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
LEKL+ + + F PVD +LG+ DYF I+R PMDL T++ +L Y+ P+E+ +DV
Sbjct: 2616 LEKLVTQEPESIPFRMPVDPNSLGIPDYFDIVRQPMDLSTIRKKLESGQYQDPREYVDDV 2675
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFE 466
L F NA YN K V+ +L ++FE
Sbjct: 2676 WLMFDNAWLYNRKTSRVYRYCTKLSEVFE 2704
>gi|313232668|emb|CBY19338.1| unnamed protein product [Oikopleura dioica]
Length = 814
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 54/105 (51%), Gaps = 4/105 (3%)
Query: 388 GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTY 447
++F PVD K L L DY II HPMD+GTV+ +L Y P E +D+ L FHN Y
Sbjct: 242 SYLFYEPVDYKKLKLPDYPKIITHPMDMGTVRQKLVDGKYSDPMEVQKDMELMFHNCYRY 301
Query: 448 NPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEMGFHT 492
NP V A++L IF W + Y R + + E+ H+
Sbjct: 302 NPPSNSVVKAAKKLDTIFHKIWNI----YLRTLESHGEEEVEAHS 342
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 57/117 (48%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+L K+ KH+H W F PVD L L DY+ +++ PMDL T+K + + Y S E D
Sbjct: 24 ILVKVQKHQHSWPFQKPVDPVALALPDYYEVVKKPMDLSTIKKKFDTYQYNSGAEALSDF 83
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEMGFHTPT 494
+ F N YN DV +M + + F+D + S+ + + E+ PT
Sbjct: 84 EVMFSNCYLYNKPTDDVTLMCQAVESAFKDLVKRMNSDPTLRSELEVNLEINITLPT 140
>gi|737920|prf||1923401A protein CBP
Length = 2441
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 60/106 (56%), Gaps = 7/106 (6%)
Query: 370 KIFK------SCSALLEKLMKH-KHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
KIFK + LE L + F PVD + LG+ DYF I+++PMDL T+K +L
Sbjct: 1084 KIFKPEELRQALMPTLEALYRQDPESLPFRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKL 1143
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
+ Y+ P ++ +DVRL F+NA YN K V+ +L ++FE +
Sbjct: 1144 DTGQYQEPWQYVDDVRLMFNNAWLYNRKTSRVYKFCSKLAEVFEQE 1189
>gi|435855|gb|AAB28651.1| CREB-binding protein [Mus sp.]
Length = 2441
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 60/106 (56%), Gaps = 7/106 (6%)
Query: 370 KIFK------SCSALLEKLMKH-KHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
KIFK + LE L + F PVD + LG+ DYF I+++PMDL T+K +L
Sbjct: 1084 KIFKPEELRQALMPTLEALYRQDPESLPFRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKL 1143
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
+ Y+ P ++ +DVRL F+NA YN K V+ +L ++FE +
Sbjct: 1144 DTGQYQEPWQYVDDVRLMFNNAWLYNRKTSRVYKFCSKLAEVFEQE 1189
>gi|300701921|ref|XP_002995060.1| hypothetical protein NCER_102192 [Nosema ceranae BRL01]
gi|239603745|gb|EEQ81389.1| hypothetical protein NCER_102192 [Nosema ceranae BRL01]
Length = 368
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 64/104 (61%)
Query: 372 FKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPK 431
K C +L+KL ++++ + F PVD G+ DY I++PMDL TVK +L+ Y +P+
Sbjct: 13 MKYCGQILQKLKRNQNAFPFLEPVDPIKYGIPDYPLKIKYPMDLSTVKKKLDSKVYNTPE 72
Query: 432 EFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
F D++L F+N TYN DV+++ ++L + +++ + ++ E
Sbjct: 73 MFDSDIKLMFNNCYTYNHPSSDVYLLGKKLEEYYDELFALLPME 116
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 134/296 (45%), Gaps = 60/296 (20%)
Query: 342 PAESNKKSK-----LNGKKQAGNELAHGFGTGSKIFKSCSALLEKLMKHKHG---WVFNA 393
P E +KK K L KQ + G ++ C +L +++K K+ W F
Sbjct: 114 PMEISKKRKRPEMSLERSKQVKRTIRSGDTMKIDDYEFCIEVLNEILKSKYKGFVWPFLE 173
Query: 394 PVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQD 453
PVD +NL L Y+ II++PMDL ++K +L+ YK EF+ D+RL N +N +G D
Sbjct: 174 PVD-ENL-LPQYYEIIKNPMDLKSIKDKLDLKSYKGVDEFSNDLRLITENCHKFNDQGSD 231
Query: 454 VHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEMGFHTPTSRKAPPLPPPLDMR-RILD 512
V+ +L ++ + A+YE P D++ RIL+
Sbjct: 232 VYRCGTELNELVNS--------------LLANYE----------------PKDLKGRILE 261
Query: 513 RSESITH------PMDSRLKPISTTPSSRTPAPKKPKAKDPHKRDMTYDEKQKLSTNLQS 566
+ I ++S+L+ + +P K + + +E+ +L + +
Sbjct: 262 LKKKIVQYTKEVKALESKLR----DKNDGSPVTVK---------NYSLNERIELGNRILN 308
Query: 567 LPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWELDRFVTNYKKSLSKN 622
L + D + +II+K ++ + ++EIEVD+ + E+D +++N + L +N
Sbjct: 309 LNKIQTDTVAKIIQKYSAGEYVENNEIEVDLRILPDNVYEEIDMYISNIEIGLEEN 364
>gi|323448923|gb|EGB04816.1| hypothetical protein AURANDRAFT_72433 [Aureococcus anophagefferens]
Length = 1616
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 56/95 (58%), Gaps = 1/95 (1%)
Query: 375 CSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFA 434
C +LE LM+ K F PVD + +G DY TI+ PMD GTVK +L+ Y + FA
Sbjct: 637 CGDVLEYLMRTKQAEWFLEPVDPEVMGNDDYPTIVAAPMDFGTVKAKLDAGDY-TVHTFA 695
Query: 435 EDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKW 469
DVRL F NAMT+N +G DVH A L FE ++
Sbjct: 696 ADVRLVFRNAMTFNVEGDDVHEAALWLDVKFEKRY 730
>gi|195062991|ref|XP_001996293.1| GH22415 [Drosophila grimshawi]
gi|193899788|gb|EDV98654.1| GH22415 [Drosophila grimshawi]
Length = 309
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 51/88 (57%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L H + + F PV+ K L L DY II+ PMDL T+K RL ++Y S E A D+
Sbjct: 36 VMKSLWNHHYAYPFQQPVNAKKLKLPDYHDIIKQPMDLATIKKRLANSYYWSATEAAADI 95
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIF 465
L F N YN +DV IMA+ L +F
Sbjct: 96 NLIFTNCSLYNKPTEDVIIMAKVLESVF 123
>gi|302308121|ref|NP_984928.2| AER068Cp [Ashbya gossypii ATCC 10895]
gi|299789305|gb|AAS52752.2| AER068Cp [Ashbya gossypii ATCC 10895]
gi|374108151|gb|AEY97058.1| FAER068Cp [Ashbya gossypii FDAG1]
Length = 635
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 53/102 (51%), Gaps = 5/102 (4%)
Query: 372 FKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNW-Y 427
K C +L++L KH + F PVD L YF ++ PMDLGT+ +L NW Y
Sbjct: 244 MKFCQQVLKELTAKKHASFNYPFLEPVDPIALNCPSYFDYVKEPMDLGTIGKKLG-NWEY 302
Query: 428 KSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKW 469
+F DVRL F N +NP G V++M +L +F KW
Sbjct: 303 ADYDDFERDVRLVFKNCYAFNPDGTLVNMMGHRLEDVFNSKW 344
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 38/76 (50%)
Query: 391 FNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPK 450
F PVD L + YF I+ PMDL T++ +L Y++P++ A+D L N +N
Sbjct: 101 FLQPVDPVKLNVPHYFQHIKRPMDLSTIERKLAVGAYETPEQVAQDFNLMVDNCAKFNGA 160
Query: 451 GQDVHIMAEQLLKIFE 466
+ MA + FE
Sbjct: 161 SSVIAQMARNIQASFE 176
Score = 43.1 bits (100), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWEL-DR 610
+TYD K+ +S + LP KL+ V IIK + D E+E+DID +D T+ L +
Sbjct: 479 VTYDMKRIISERIGDLPEAKLERAVDIIKNSMPDIVGADGEVELDIDQLDDTTILTLYNT 538
Query: 611 FVTNY 615
F Y
Sbjct: 539 FFRQY 543
>gi|325188110|emb|CCA22651.1| chromodomainhelicaseDNAbinding protein putative [Albugo laibachii
Nc14]
Length = 1883
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 47/99 (47%), Positives = 60/99 (60%), Gaps = 7/99 (7%)
Query: 376 SALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNK-NWYKSPKE-- 432
S L++KL G +F PVD NL + DY II +PMDLGT+ +RL + N+Y P
Sbjct: 187 SGLVKKLSNEHGGDLFRQPVDT-NL-VTDYLQIIHNPMDLGTIGSRLARENYYIGPSATS 244
Query: 433 -FAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWV 470
FA DVRL F N M YN + D+ I+A LLK FE KW+
Sbjct: 245 LFASDVRLIFANCMQYNAEKSDIWIVASHLLKTFE-KWM 282
>gi|195063016|ref|XP_001996299.1| GH22418 [Drosophila grimshawi]
gi|193899794|gb|EDV98660.1| GH22418 [Drosophila grimshawi]
Length = 309
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 51/88 (57%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+++ L H + + F PV+ K L L DY II+ PMDL T+K RL ++Y S E A D+
Sbjct: 36 VMKSLWNHHYAYPFQQPVNAKKLKLPDYHDIIKQPMDLATIKKRLANSYYWSATEAAADI 95
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIF 465
L F N YN +DV IMA+ L +F
Sbjct: 96 NLIFTNCSLYNKPTEDVIIMAKVLESVF 123
>gi|452824080|gb|EME31085.1| bromodomain-containing protein 3 [Galdieria sulphuraria]
Length = 829
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 57/114 (50%), Gaps = 15/114 (13%)
Query: 371 IFKSCSALLEKLMKHKHGWVFNAPVD--VKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
++ C +L+ LM+ K F P+D + + YF I++HPMDLGTV R+ Y+
Sbjct: 374 LYFKCKNVLKSLMERKDARAFLKPIDELFTSEEIPGYFQIVKHPMDLGTVLYRMELGLYR 433
Query: 429 SP-------------KEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKW 469
P + F DVRL + NAMTYN +G H A +L + FE K
Sbjct: 434 HPTVEELPKYPQFDLERFKADVRLVWENAMTYNLQGTPYHTTAAKLSETFERKL 487
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHD-DEIEVDIDSVDAETLWELDR 610
MTY+EK+KL N+ LP +KL +VQII + S +D +EIE+DID++D TL E++
Sbjct: 635 MTYEEKRKLGDNINLLPGDKLAKVVQIIMRHKGSTPVNDREEIEIDIDALDTRTLREMEA 694
Query: 611 FV 612
FV
Sbjct: 695 FV 696
>gi|121707746|ref|XP_001271928.1| transcription regulator BDF1, putative [Aspergillus clavatus NRRL
1]
gi|119400076|gb|EAW10502.1| transcription regulator BDF1, putative [Aspergillus clavatus NRRL
1]
Length = 840
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 57/102 (55%), Gaps = 3/102 (2%)
Query: 372 FKSCSALLEKLMKHK-HGWV--FNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
+ C +L++L K K + W F PVD L + Y +II+ PMDL TV+++L Y+
Sbjct: 483 LRFCQEVLDELHKPKFYTWAAPFYFPVDPVALNIPTYHSIIKKPMDLSTVQSKLKTGQYE 542
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWV 470
+ KEF DVR F N +N G ++ ++ +IFE+KW
Sbjct: 543 NAKEFEVDVRQIFKNCFKFNIPGDPTYMAGQRFQEIFENKWA 584
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 53/95 (55%), Gaps = 6/95 (6%)
Query: 379 LEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVR 438
++ L + F PVD + + Y II+HPMDLGT++ +L N YK+ + D
Sbjct: 296 IQSLKRMNDARFFREPVDPIKMNIPHYPQIIKHPMDLGTIERKLKNNEYKAAQAVVNDFH 355
Query: 439 LTFHNAMTYNPKGQDVHIMAEQLLKI---FEDKWV 470
L NA+T+N G D H+++++ +K+ FE + V
Sbjct: 356 LMVQNAVTFN--GPD-HLVSQEGMKLQGTFEKQMV 387
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 549 KRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSL-FQHDDEIEVDIDSVDAETLWE 607
+R +TY EKQ +S + SLP +K+ ++II+ +L + EIE+DID + + L
Sbjct: 691 QRYVTYHEKQIISNGISSLPDKKMQEALKIIQSNVPALKGTQETEIELDIDELPNDVLLM 750
Query: 608 LDRFV 612
L +FV
Sbjct: 751 LLKFV 755
>gi|422294825|gb|EKU22125.1| bromodomain containing protein [Nannochloropsis gaditana CCMP526]
Length = 227
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 65/110 (59%), Gaps = 4/110 (3%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN 425
G SK+++ L++ L K F PVD K LGL DY +I PMDLGT+K RL
Sbjct: 4 GGLSKMYQ----LVQWLSNQKDVDAFLEPVDWKTLGLTDYPLVISTPMDLGTIKGRLESG 59
Query: 426 WYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
Y + AEDVRL ++N TYN +G ++ +A++L FE+K+ I++E
Sbjct: 60 HYTKHAQVAEDVRLVWNNCKTYNQEGSYLYKIADKLAGKFEEKYSKIKTE 109
>gi|353235918|emb|CCA67923.1| related to TAF2-component of TFIID complex [Piriformospora indica DSM
11827]
Length = 1782
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 76/144 (52%), Gaps = 11/144 (7%)
Query: 375 CSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFA 434
C ALL+KL HGW+F PV+ GL Y+ I+HPMD T++ +L+K Y + ++FA
Sbjct: 1558 CKALLQKLADVPHGWIFLNPVNSTLPGLETYYEEIKHPMDYSTMRRKLDKKQYATMEDFA 1617
Query: 435 EDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVV-----IESEYNREM-----RIGA 484
+D+RL + N +N D+ + + + +++ +W + +E R++ ++ A
Sbjct: 1618 DDLRLVYANGRQFNAAAPDILDLIDTIEALWKKEWPSMLKRKMPAELKRQLAQALNQLKA 1677
Query: 485 -DYEMGFHTPTSRKAPPLPPPLDM 507
D M FH P A +P D+
Sbjct: 1678 EDVNMIFHFPVDPIALGIPHYFDV 1701
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 55/104 (52%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN 425
G S+ K A+L+++ H F PVD YF +I+HPMDL TV ++L
Sbjct: 1231 GLTSQEKKMIEAILKRVTAHPSAIWFLHPVDPVRHNAPTYFDVIKHPMDLSTVASKLKSG 1290
Query: 426 WYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKW 469
Y + ++FA+D +L NA +NP G D H A ++ + F+ W
Sbjct: 1291 QYGNRQQFADDFKLILSNAYLFNPPGTDPHNDALKIEEFFDKMW 1334
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 390 VFNAPVDVKNLGLHDYFTIIRH--PMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTY 447
+F+ PVD LG+ YF +I DL T+K +L+K Y++ ++ DVRL F NA +
Sbjct: 1683 IFHFPVDPIALGIPHYFDVIAREDARDLSTIKAKLDKGGYQTAEQVHRDVRLMFSNAYKF 1742
Query: 448 NPKGQDVHIMAEQL 461
N + V +A L
Sbjct: 1743 NGRDSPVSSVAAAL 1756
>gi|384496605|gb|EIE87096.1| hypothetical protein RO3G_11807 [Rhizopus delemar RA 99-880]
Length = 1667
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 58/107 (54%)
Query: 372 FKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPK 431
++ ++ + M + H + F PVD G+ YFTII+ PMDLGTV+T+L N Y +P
Sbjct: 1248 YEKMETIILRAMSNPHAFEFLRPVDPVKQGVPHYFTIIKEPMDLGTVETKLRNNEYTNPL 1307
Query: 432 EFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNR 478
E ED+RL F N T+NP V+ A+ L + + W Y R
Sbjct: 1308 EMNEDIRLVFRNCYTFNPPNTYVYNEAKMLEEDYNKDWQRYFGNYRR 1354
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 73/160 (45%), Gaps = 14/160 (8%)
Query: 373 KSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKE 432
K C +++KL H+ F+ PVD G+ Y+ +I+ PMDL ++ +++ +K+ E
Sbjct: 1416 KKCERIIKKLWAHQASAAFHKPVDAIAEGVPHYYDVIKRPMDLSVIQRNFDQDKFKNIWE 1475
Query: 433 FAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEY-------NREMRIGAD 485
D+R F N ++N G V + L F W +E+ E RI
Sbjct: 1476 LERDIRQIFWNCYSFNHHGSWVVKQCQALEAFFNQIW---SAEFADPDCLKGEEKRIA-- 1530
Query: 486 YEMGFHTPTSRKAPPLP-PPLDMRRILDRSESITHPMDSR 524
+ + T R+ L P+D+ + D ++ I PMD R
Sbjct: 1531 -QKVINNLTYRECAALFNEPVDLSALPDYAQIIKKPMDLR 1569
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 51/95 (53%)
Query: 372 FKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPK 431
K C +L K+ KH F PVD G +Y+ II++PMDL +K ++ Y + +
Sbjct: 1048 LKKCRRVLNKINKHGCALPFVQPVDEVLDGAPNYYKIIKNPMDLSLIKRKVENKEYTTFR 1107
Query: 432 EFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFE 466
+F +D+RL +N TYN G V+ + L +FE
Sbjct: 1108 QFEDDIRLMLNNCYTYNGPGTYVYNEGQALEAVFE 1142
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 46/94 (48%), Gaps = 14/94 (14%)
Query: 372 FKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPK 431
++ C+AL FN PVD+ L DY II+ PMDL T+ RL Y S K
Sbjct: 1539 YRECAAL------------FNEPVDLS--ALPDYAQIIKKPMDLRTIWERLESGKYTSLK 1584
Query: 432 EFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIF 465
+D+RL F N TYN G + +QL K +
Sbjct: 1585 AIDQDIRLVFKNCFTYNAVGTFGYEQGKQLEKYY 1618
>gi|407040562|gb|EKE40194.1| bromodomain containing protein [Entamoeba nuttalli P19]
Length = 557
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 125/286 (43%), Gaps = 40/286 (13%)
Query: 334 LLAKDKFPPAESNKKSKLNGKKQAGNELAHGFGTGSKIFKSCSALLEKLMKHKHGWVFNA 393
+L KDK S K++ KK+ E G +K CS++L +M ++ F
Sbjct: 286 VLLKDK-----SRNGKKISRKKEIDIEAVSGKLHMNKDLVICSSILGAIMNNQESEPFKT 340
Query: 394 PVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQD 453
VD L + DY+ I++HPMDL TV +L+K Y++ ++F +D++L F NA YN
Sbjct: 341 EVDPIALNILDYYKIVKHPMDLETVSIKLSKGLYETKEDFKKDMKLIFENAKIYNSSENS 400
Query: 454 VHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEMGFHTPTSRKAPPLPPPLDMRRILDR 513
+H A L+K F+ + E N I P P P+ +R I +
Sbjct: 401 IHQSAINLMKKFDKMFNSAFLENNPPKLI---------LPEQVSVTPTFLPVAVRPIYEH 451
Query: 514 S------ESITHPMDSRLKPISTTPSSRTPAPKKPKAKDPHKRDMTYDEKQKLSTNLQSL 567
S E+ M ++ I T R + MT EK+ L+ + +
Sbjct: 452 SNFYYCDEAEIEEMKEKMAKIRGTKYQR--------------KKMTIKEKEVLTNQISKM 497
Query: 568 PSEKLDNIVQIIKKRNSSLFQHDDE-IEVDIDSVDAETLWELDRFV 612
SE+++ + ++ +F+ +E++++ D E L + + V
Sbjct: 498 SSERINLLFNVL-----GIFKEPGRVVEINLNDYDEEELINIKKIV 538
>gi|393218547|gb|EJD04035.1| Bromodomain-containing protein [Fomitiporia mediterranea MF3/22]
Length = 795
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 53/101 (52%), Gaps = 3/101 (2%)
Query: 372 FKSCSALLEKLMKHKHGWV---FNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
+ C +L L K + F PVD LG+ Y I++ PMDLGT++ +L+ Y
Sbjct: 456 LRYCGKILTDLHKKSLFTIASPFYEPVDAVKLGIPHYPKIVKRPMDLGTMRKKLDNREYP 515
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKW 469
+ +F ED L N M +NP G VH ++ ++FE+KW
Sbjct: 516 NAAKFKEDFALMIRNCMAFNPVGTAVHDAGVEIQRVFEEKW 556
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 50/107 (46%), Gaps = 12/107 (11%)
Query: 372 FKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN------ 425
++ C + + L K K F PVD L + Y +I++HPMD T+ +L +
Sbjct: 255 YRFCVSTVRNLRKLKDATPFLNPVDPVALNIPHYLSIVKHPMDFATIDRKLVASNPVKPD 314
Query: 426 ------WYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFE 466
Y + EF DVRL F NA T+N V M +++ IF+
Sbjct: 315 SNPANPRYLTADEFIADVRLMFSNAYTFNGPEHVVTQMGKRVEAIFD 361
>gi|324504882|gb|ADY42105.1| Homeotic protein female sterile [Ascaris suum]
Length = 696
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 61/122 (50%), Gaps = 11/122 (9%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
+L+ L +H+H W F +PVD L + DY +++ PMDL T+ RL ++Y S +E D
Sbjct: 100 VLDPLTRHQHAWPFISPVDAVKLNIPDYHNVVKRPMDLNTIGKRLQNSYYFSAEECMHDF 159
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEMGFHTPTSRK 497
F N YN K DV +M + IE+EY ++++ E+ +++
Sbjct: 160 ETIFANCYEYNRKEDDVWLMCKN-----------IENEYREKLKLLPTPEVELTRSVAKR 208
Query: 498 AP 499
P
Sbjct: 209 LP 210
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWELDRF 611
M ++K++LS ++ LP +KL+ +V IIK DE+E DI+++ TL +L+ F
Sbjct: 549 MNREDKRRLSLDINRLPEDKLNTVVNIIKSHEGLPDCDADEVEFDIETLKPSTLRDLEVF 608
Query: 612 VTNYKKSLSKNKRK 625
V L K RK
Sbjct: 609 VA---ACLKKKPRK 619
>gi|427795843|gb|JAA63373.1| Putative bromodomain adjacent to zinc finger domain protein 2b,
partial [Rhipicephalus pulchellus]
Length = 1933
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 54/104 (51%), Gaps = 10/104 (9%)
Query: 370 KIFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKS 429
K +C +LE+L +HK W F PV+ K Y I+ PMD+ T++++L N YK
Sbjct: 1831 KDLAACRQILEELEQHKDAWPFLVPVNTKQF--PSYRKFIKKPMDVSTMRSKLESNQYKC 1888
Query: 430 PKEFAEDVRLTFHNAMTYN----PKGQDVHIMAEQLLKIFEDKW 469
EFA DVRL F N T+N P GQ H M FE +W
Sbjct: 1889 KDEFALDVRLIFDNCETFNEDDSPVGQAGHNMR----NFFESRW 1928
>gi|333360985|pdb|2L5E|A Chain A, Complex Between Bd1 Of Brd3 And Gata-1 C-Tail
Length = 128
Score = 78.6 bits (192), Expect = 1e-11, Method: Composition-based stats.
Identities = 39/93 (41%), Positives = 53/93 (56%)
Query: 376 SALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAE 435
+ +++ L KH+ W F PVD L L DY II++PMD+GT+K RL N+Y S E +
Sbjct: 25 NVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQ 84
Query: 436 DVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
D F N YN D+ +MA+ L KIF K
Sbjct: 85 DFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQK 117
>gi|195446236|ref|XP_002070690.1| GK19172 [Drosophila willistoni]
gi|194166775|gb|EDW81676.1| GK19172 [Drosophila willistoni]
Length = 415
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 53/100 (53%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN 425
G + + + LL + + + + F PVD LG+ DY II++PMDL T+K RLN N
Sbjct: 40 GRRTNVLEDLKVLLNYIWRIRWSYHFRKPVDTITLGIPDYHAIIKYPMDLATIKKRLNNN 99
Query: 426 WYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIF 465
+Y E ED L F N M YN +G V+ ++L F
Sbjct: 100 YYWQADEALEDFELIFENCMLYNMEGTPVYSAGKELRAAF 139
>gi|449541548|gb|EMD32531.1| hypothetical protein CERSUDRAFT_118583 [Ceriporiopsis subvermispora
B]
Length = 1819
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 66/138 (47%), Gaps = 2/138 (1%)
Query: 337 KDKFP-PAESNKKSKLNGKKQAGN-ELAHGFGTGSKIFKSCSALLEKLMKHKHGWVFNAP 394
+D FP P KL KK+ N A G ++C L+KL +KH VF P
Sbjct: 1195 RDVFPVPTVPKVPKKLPEKKKVQNVPKAQSGGMSLNDLRACRNALKKLQTNKHAPVFLQP 1254
Query: 395 VDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDV 454
VD +YF II+ PMDL T+ +L YK EF D+ L +NA TYN G V
Sbjct: 1255 VDPVRDRAPNYFDIIKKPMDLSTISAKLESGQYKDRFEFRSDLHLMINNAKTYNMAGSFV 1314
Query: 455 HIMAEQLLKIFEDKWVVI 472
H A L FE +WV I
Sbjct: 1315 HEQALALESFFEKQWVRI 1332
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 50/97 (51%)
Query: 373 KSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKE 432
K C +L+ L + +F PVD G Y+ I+ PMD T+ + + Y + ++
Sbjct: 1584 KKCRDILKTLTRVLEAAIFLRPVDPVLDGCPTYYDEIKEPMDFATMGNKFTEGAYTTMED 1643
Query: 433 FAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKW 469
FA+DV L F N T+NP G A+ + ++++ +W
Sbjct: 1644 FAKDVELVFANCRTFNPPGTYPVQCADTVERVWKREW 1680
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 373 KSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTII--RHPMDLGTVKTRLNKNWYKSP 430
+S L+ KL+ WVF PVD LG+ YF +I + DL T++ +L+ + Y+S
Sbjct: 1694 RSLQGLMTKLVVDPVSWVFREPVDPVLLGIPTYFDVIPKKDARDLRTIRNKLDADKYESI 1753
Query: 431 KEFAEDVRLTFHNAMTYN 448
+ F D+ L +NA+ +N
Sbjct: 1754 EAFEADMDLMINNAIRFN 1771
>gi|17551634|ref|NP_508124.1| Protein F13C5.2 [Caenorhabditis elegans]
gi|351061577|emb|CCD69431.1| Protein F13C5.2 [Caenorhabditis elegans]
Length = 374
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 55/101 (54%), Gaps = 3/101 (2%)
Query: 372 FKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
K C ++L++ K H + F PVDV LGL DY +I+ PMD+ T++ +L Y
Sbjct: 119 LKKCLSILKEFEKSTHDSFTFPFRKPVDVVLLGLTDYHEVIKKPMDMSTIRKKLIGEEYD 178
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKW 469
+ EF ED +L +N +TYN +G V A Q K F KW
Sbjct: 179 TAVEFKEDFKLMINNCLTYNNEGDPVADFALQFRKKFAAKW 219
>gi|170090954|ref|XP_001876699.1| bromodomain containing protein [Laccaria bicolor S238N-H82]
gi|164648192|gb|EDR12435.1| bromodomain containing protein [Laccaria bicolor S238N-H82]
Length = 621
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 56/94 (59%), Gaps = 3/94 (3%)
Query: 370 KIFKSCSALLE-KLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
K F+S LL ++ +H++G +F+ P+ KN DY I++ PMDL T+KTR+
Sbjct: 507 KRFQSVIGLLHSQISQHRNGNIFHNPI--KNSEAPDYHDIVKRPMDLKTIKTRVKDGLVA 564
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLL 462
+ EF D+ L F NAM YN G DVH MAE ++
Sbjct: 565 NSLEFQRDIFLMFANAMMYNRPGSDVHAMAEDMM 598
>gi|118400741|ref|XP_001032692.1| Bromodomain containing protein [Tetrahymena thermophila]
gi|89287036|gb|EAR85029.1| Bromodomain containing protein [Tetrahymena thermophila SB210]
Length = 292
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 52/84 (61%)
Query: 375 CSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFA 434
CS +L++L+K + F PVD + L L DY II++PMDLGT++ L YK PK+F
Sbjct: 9 CSKVLKQLLKLPESYPFREPVDYEQLQLFDYPDIIKNPMDLGTIEQNLKAKKYKQPKDFF 68
Query: 435 EDVRLTFHNAMTYNPKGQDVHIMA 458
+D+ L ++N YN G +++ A
Sbjct: 69 DDIFLVWNNCKMYNQDGSNIYQQA 92
>gi|308489328|ref|XP_003106857.1| hypothetical protein CRE_17238 [Caenorhabditis remanei]
gi|308252745|gb|EFO96697.1| hypothetical protein CRE_17238 [Caenorhabditis remanei]
Length = 392
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 55/100 (55%), Gaps = 3/100 (3%)
Query: 373 KSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKS 429
K C LL++ K H + F PVD LGL DY +I+ PMD+ T+K +L Y++
Sbjct: 120 KKCLGLLKEFEKTTHNAYTFPFRKPVDTVLLGLVDYHEVIKKPMDMSTMKKKLIGEEYEN 179
Query: 430 PKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKW 469
++F +D +L N +TYN +G V +A Q + F KW
Sbjct: 180 AEDFKKDFKLMIQNCLTYNNEGDPVSDLAIQFREAFAAKW 219
>gi|363750698|ref|XP_003645566.1| hypothetical protein Ecym_3256 [Eremothecium cymbalariae
DBVPG#7215]
gi|356889200|gb|AET38749.1| Hypothetical protein Ecym_3256 [Eremothecium cymbalariae
DBVPG#7215]
Length = 693
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 53/102 (51%), Gaps = 5/102 (4%)
Query: 372 FKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNW-Y 427
K C +L++L KH + F PVD L YF ++ PMDLGT+ +L NW Y
Sbjct: 301 MKFCQQVLKELTAKKHSSFNYPFLEPVDPVALNCPSYFDYVKEPMDLGTIGKKLG-NWEY 359
Query: 428 KSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKW 469
+F DVRL F N +NP G V++M +L +F KW
Sbjct: 360 VDYDQFERDVRLVFKNCYAFNPDGTLVNMMGHRLEDVFNSKW 401
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 41/76 (53%)
Query: 391 FNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPK 450
F PVD L + +YF+ I+ PMDL T++ +L N Y++P++ A+D L N +N
Sbjct: 158 FLQPVDPVKLNVPNYFSHIQRPMDLSTIERKLVVNGYETPEQVAQDFNLMVDNCSKFNGP 217
Query: 451 GQDVHIMAEQLLKIFE 466
+ MA + FE
Sbjct: 218 SSVIAQMARNIQASFE 233
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 33/57 (57%)
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWEL 608
+TYD K+ +S + LP KL+ V IIKK + D E+E+DID +D T+ L
Sbjct: 538 VTYDMKRIISERIGDLPESKLERAVDIIKKSMPDIVGADGEVELDIDQLDDITILTL 594
>gi|357616639|gb|EHJ70297.1| hypothetical protein KGM_09919 [Danaus plexippus]
Length = 1569
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 64/134 (47%), Gaps = 22/134 (16%)
Query: 340 FPPAESNKKSKLNGKKQAGNELAHGFGTGSKIFKSCSALLEKLMKHKHGWVFNAPVDVKN 399
P KK K + KKQ K + C LL ++ H+H W F PV+ K
Sbjct: 1451 LPLLSRAKKEKNSAKKQL------------KDMQFCKNLLCEMECHEHAWPFLVPVNTKQ 1498
Query: 400 LGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYN----PKGQDVH 455
Y +I+ PMDL T+K +L+++ YK +EFA DVRL F N +N P G+ H
Sbjct: 1499 FP--QYRKVIKSPMDLSTIKRKLHESGYKCKEEFASDVRLIFSNCEVFNEDESPVGRAGH 1556
Query: 456 IMAEQLLKIFEDKW 469
M E FE +W
Sbjct: 1557 CMRE----FFERRW 1566
>gi|429962983|gb|ELA42527.1| hypothetical protein VICG_00279 [Vittaforma corneae ATCC 50505]
Length = 379
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 58/104 (55%)
Query: 372 FKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPK 431
K CS +L +L ++ + F PVD LG+ DY I+HPMD+ TVK +L+ YK P
Sbjct: 34 LKYCSMILTRLKRNANAGPFLKPVDPIALGIPDYPEKIKHPMDISTVKHKLDTKTYKIPD 93
Query: 432 EFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESE 475
EF D+ L F+N TYN V+ M + L K FE + + +E
Sbjct: 94 EFHSDMTLMFNNCYTYNQPDSVVYNMGKDLQKAFESLYADLPTE 137
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 45/95 (47%), Gaps = 5/95 (5%)
Query: 375 CSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPK 431
C+ +L L K KH W F PV ++ YF+II P DL T++ + + Y S
Sbjct: 172 CAEVLLDLEKAKHKKYSWPFLYPVTEQDAP--GYFSIITQPTDLSTIRNKFDMRRYSSAS 229
Query: 432 EFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFE 466
EF D+ L N +N +V+ E+ K+ +
Sbjct: 230 EFVTDLNLMISNCFKFNKPDSEVYKCGEEFNKVIQ 264
>gi|122921158|pdb|2NXB|A Chain A, Crystal Structure Of Human Bromodomain Containing Protein
3 (Brd3)
gi|122921159|pdb|2NXB|B Chain B, Crystal Structure Of Human Bromodomain Containing Protein
3 (Brd3)
gi|340708299|pdb|3S91|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd3
In Complex With The Inhibitor Jq1
Length = 123
Score = 77.8 bits (190), Expect = 2e-11, Method: Composition-based stats.
Identities = 39/93 (41%), Positives = 53/93 (56%)
Query: 376 SALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAE 435
+ +++ L KH+ W F PVD L L DY II++PMD+GT+K RL N+Y S E +
Sbjct: 23 NVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQ 82
Query: 436 DVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
D F N YN D+ +MA+ L KIF K
Sbjct: 83 DFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQK 115
>gi|444314575|ref|XP_004177945.1| hypothetical protein TBLA_0A06350 [Tetrapisispora blattae CBS 6284]
gi|387510984|emb|CCH58426.1| hypothetical protein TBLA_0A06350 [Tetrapisispora blattae CBS 6284]
Length = 855
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 58/104 (55%), Gaps = 5/104 (4%)
Query: 370 KIFKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNW 426
++ K C +++++L K+ + F PVD + YF I+ PMDL T+ +L NW
Sbjct: 367 QVMKFCQSIVKELSSKKYSSFNYPFLVPVDPVEQNIPTYFDYIKEPMDLSTISKKL-INW 425
Query: 427 -YKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKW 469
YK+P+E D+ L F N +NP+G V++M +L IF KW
Sbjct: 426 EYKTPEEVEYDINLIFKNCYIFNPEGTIVNMMGHRLQDIFNTKW 469
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 38/76 (50%)
Query: 391 FNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPK 450
F PVD L + Y+ I+HPMDL T++ +L N Y + ED L +N + +N
Sbjct: 208 FLNPVDPVALNVPFYYNKIKHPMDLNTIERKLTLNAYDVIESLTEDFNLMVNNCILFNGP 267
Query: 451 GQDVHIMAEQLLKIFE 466
+ MA+ + FE
Sbjct: 268 TSSISQMAKNIQASFE 283
>gi|185177636|pdb|2YW5|A Chain A, Solution Structure Of The Bromodomain From Human
Bromodomain Containing Protein 3
Length = 138
Score = 77.8 bits (190), Expect = 2e-11, Method: Composition-based stats.
Identities = 39/93 (41%), Positives = 53/93 (56%)
Query: 376 SALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAE 435
+ +++ L KH+ W F PVD L L DY II++PMD+GT+K RL N+Y S E +
Sbjct: 27 NVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQ 86
Query: 436 DVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
D F N YN D+ +MA+ L KIF K
Sbjct: 87 DFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQK 119
>gi|212542081|ref|XP_002151195.1| transcription regulator BDF1, putative [Talaromyces marneffei ATCC
18224]
gi|210066102|gb|EEA20195.1| transcription regulator BDF1, putative [Talaromyces marneffei ATCC
18224]
Length = 779
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 56/101 (55%), Gaps = 3/101 (2%)
Query: 372 FKSCSALLEKLMKHKHGWV---FNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
K C +L++L K K+ V F PVD L + Y ++I+ PMDL TV+T+L Y+
Sbjct: 438 LKFCQEILDELHKPKYWAVASPFYFPVDPVALNIPTYHSVIKKPMDLYTVQTKLKAGQYE 497
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKW 469
+ KEF D+RL N +N G ++ ++ ++F +KW
Sbjct: 498 NAKEFEADIRLMLKNCFKFNIPGDPTYVAGQKCEEVFNNKW 538
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 379 LEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVR 438
L L + + PVD L + YFTII PMDL T++++L KN Y + E DV
Sbjct: 254 LTNLKRSNDARFYREPVDPIKLNIPSYFTIITEPMDLSTIESKLKKNQYNAVAEIVADVD 313
Query: 439 LTFHNAMTYNPKGQDVHIMAEQ 460
L NA +N G D HI+A++
Sbjct: 314 LMAGNAAKFN--GPD-HIVAQE 332
>gi|428181666|gb|EKX50529.1| hypothetical protein GUITHDRAFT_135178 [Guillardia theta CCMP2712]
Length = 133
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 56/99 (56%), Gaps = 6/99 (6%)
Query: 389 WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYN 448
W F PVD ++ +DYF +++ PMDLGTV +L N Y + DV TF NA YN
Sbjct: 8 WPFLEPVDPVSMNAYDYFEVVKRPMDLGTVDKKLENNQYSTCAYLLYDVLSTFKNACLYN 67
Query: 449 PKGQDVHIMAEQLLKIFEDKWV---VIESEY---NREMR 481
P VH +A+ +LKI E+ V V+ + Y NR+++
Sbjct: 68 PPENKVHQLAQDMLKIVEEACVSSPVLRTAYQFANRKLK 106
>gi|393248006|gb|EJD55513.1| Bromodomain-containing protein [Auricularia delicata TFB-10046 SS5]
Length = 748
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 56/104 (53%), Gaps = 3/104 (2%)
Query: 372 FKSCSALLEKLMKHKHGWV---FNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
K CS L++++ K +H + F PVD L + Y II+ PMDL T+K +L+ + Y
Sbjct: 413 LKFCSRLIQEMYKKQHWQIAAPFYEPVDWNKLDIPSYPKIIKKPMDLLTMKKKLDNHQYS 472
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVI 472
+F D +L N T+NP G V+ + L +FE+KW +
Sbjct: 473 DALKFYADFKLMIRNCFTFNPPGTPVNNAGQALAALFEEKWAAL 516
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 50/102 (49%), Gaps = 12/102 (11%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN----------- 425
A + L + K F PVD L + Y TII HPMDLGTV+ +L +
Sbjct: 215 ATVRTLKRMKEAGPFLQPVDPLALNIPHYPTIITHPMDLGTVERKLQASNPLKVDSSSAV 274
Query: 426 -WYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFE 466
Y + +EF D+RL F N +N V +M ++L ++F+
Sbjct: 275 GRYSAVEEFTADIRLIFANCERFNGPEHAVTLMGKRLEQVFD 316
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 36/57 (63%)
Query: 552 MTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLWEL 608
+++D+K++LS +Q+L +KL+ ++ II + + +EIE+DID + L +L
Sbjct: 608 LSFDQKKELSETIQTLEGQKLERVITIIHEGVPDIRNSTEEIELDIDQLPPAVLLKL 664
>gi|427795587|gb|JAA63245.1| Putative bromodomain adjacent to zinc finger domain protein 2b,
partial [Rhipicephalus pulchellus]
Length = 1435
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 54/104 (51%), Gaps = 10/104 (9%)
Query: 370 KIFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKS 429
K +C +LE+L +HK W F PV+ K Y I+ PMD+ T++++L N YK
Sbjct: 1333 KDLAACRQILEELEQHKDAWPFLVPVNTKQFP--SYRKFIKKPMDVSTMRSKLESNQYKC 1390
Query: 430 PKEFAEDVRLTFHNAMTYN----PKGQDVHIMAEQLLKIFEDKW 469
EFA DVRL F N T+N P GQ H M FE +W
Sbjct: 1391 KDEFALDVRLIFDNCETFNEDDSPVGQAGHNMR----NFFESRW 1430
>gi|47210344|emb|CAF96012.1| unnamed protein product [Tetraodon nigroviridis]
Length = 261
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 56/93 (60%), Gaps = 3/93 (3%)
Query: 372 FKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
K CS +L++++ +H W F PVDV LGLHDY II+ PMDL T++ ++++ Y
Sbjct: 168 LKCCSDVLKEMLSKRHYAYAWPFYVPVDVVALGLHDYHDIIKQPMDLSTIRKKMDQGEYA 227
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQL 461
EFA DV+L F N YNP +V MA +L
Sbjct: 228 EAAEFAADVQLMFSNCYKYNPPSHEVVHMARKL 260
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 39/72 (54%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
+++ L +H W F PVD LGL DY+T+I +PMDL T+ RL +Y E +D
Sbjct: 30 VVIKALWRHPFSWPFQQPVDAVALGLLDYYTVITNPMDLSTITKRLKNKYYWQASECIQD 89
Query: 437 VRLTFHNAMTYN 448
+ F N YN
Sbjct: 90 LNTMFSNCYAYN 101
>gi|195392286|ref|XP_002054790.1| GJ22598 [Drosophila virilis]
gi|194152876|gb|EDW68310.1| GJ22598 [Drosophila virilis]
Length = 354
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 56/100 (56%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN 425
G + + +S ++L+ + K + + F PVD L + DY +I+HPMDL T++ RLN N
Sbjct: 39 GRRTNVLESLKSVLKYVWKSRWSYYFRYPVDAVALCIPDYHNLIKHPMDLSTIRRRLNNN 98
Query: 426 WYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIF 465
+Y E D L F N M YN +G +VH ++L + F
Sbjct: 99 YYWKSDEALGDFELIFENCMLYNLEGSEVHKAGKELREAF 138
>gi|195503051|ref|XP_002098489.1| GE23913 [Drosophila yakuba]
gi|194184590|gb|EDW98201.1| GE23913 [Drosophila yakuba]
Length = 535
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 56/100 (56%)
Query: 366 GTGSKIFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKN 425
G + + + ++L + + + + F PVD +LG+ DY +++HPMDL T++ RL+ N
Sbjct: 38 GRRTNVLEDLKSVLNFIWRSRCSYHFRHPVDAVSLGVPDYHAVVKHPMDLSTIRKRLHNN 97
Query: 426 WYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIF 465
+Y E ED +L F N M YN +G VH + L + F
Sbjct: 98 YYWQASEALEDFKLIFENCMMYNLEGSPVHQAGKDLKEAF 137
>gi|189239068|ref|XP_971434.2| PREDICTED: similar to zinc finger protein [Tribolium castaneum]
Length = 1308
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 63/120 (52%), Gaps = 10/120 (8%)
Query: 377 ALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAED 436
A+L ++MK + W F PV + + + DY+ +I PMD GT+K +LN YK +F D
Sbjct: 1191 AVLSEVMKDANAWPFLRPV--QKIEVPDYYDVITKPMDFGTIKYKLNMGEYKEDAQFMAD 1248
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEMGFHTPTSR 496
L F N TYN DV+ QLL++F+ K RE+ + EM ++ P +R
Sbjct: 1249 ALLVFQNCNTYNHTEDDVYKCGVQLLRLFQKK--------CRELGLKLPEEMDYNDPNAR 1300
>gi|432098345|gb|ELK28145.1| Bromodomain adjacent to zinc finger domain protein 2B [Myotis
davidii]
Length = 2206
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 54/101 (53%), Gaps = 2/101 (1%)
Query: 369 SKIFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
SK CS +L ++ H+ W F PV++K + Y +I+ PMD T++ +L+ Y
Sbjct: 2101 SKDLALCSMILTEMETHEDAWPFLLPVNLKLVP--GYKKVIKKPMDFSTIREKLSSGQYS 2158
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKW 469
SP+ FA DVRL F N T+N D+ + K FE KW
Sbjct: 2159 SPEYFALDVRLVFDNCETFNEDDSDIGRAGHSMRKYFEKKW 2199
>gi|428178984|gb|EKX47857.1| hypothetical protein GUITHDRAFT_43769, partial [Guillardia theta
CCMP2712]
Length = 71
Score = 77.4 bits (189), Expect = 2e-11, Method: Composition-based stats.
Identities = 38/71 (53%), Positives = 50/71 (70%)
Query: 395 VDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDV 454
VD K+LGL+DYF +I+ PMDLGT++T L ++ YKS E+ +DV LTF NAM YNP V
Sbjct: 1 VDAKSLGLNDYFDVIKRPMDLGTIQTNLKRHSYKSFFEYRDDVILTFDNAMQYNPPDNYV 60
Query: 455 HIMAEQLLKIF 465
H +A + K F
Sbjct: 61 HGLAAKCKKRF 71
>gi|260793791|ref|XP_002591894.1| hypothetical protein BRAFLDRAFT_125529 [Branchiostoma floridae]
gi|229277106|gb|EEN47905.1| hypothetical protein BRAFLDRAFT_125529 [Branchiostoma floridae]
Length = 1570
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 55/94 (58%), Gaps = 2/94 (2%)
Query: 372 FKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPK 431
K+C +L+KLM++K F PVDV+++ DY+ +I+ PMDL T+K + Y SP+
Sbjct: 1437 LKTCEDILQKLMRNKSSIYFRKPVDVEDVP--DYYDVIKKPMDLTTIKNKCVCLDYCSPQ 1494
Query: 432 EFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIF 465
EF DV F NA YN G D+ A+ L K F
Sbjct: 1495 EFINDVSCIFDNAHEYNKIGSDIRDKADTLEKYF 1528
>gi|145549930|ref|XP_001460644.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124428474|emb|CAK93247.1| unnamed protein product [Paramecium tetraurelia]
Length = 503
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 50/82 (60%)
Query: 373 KSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKE 432
K +L+ L K K +F+ PVD K G++DY+ I++ PMD GTVK +LN N YK+ KE
Sbjct: 397 KVAKKVLQILWKAKGAQLFHNPVDEKKYGINDYYDIVKRPMDFGTVKQKLNTNQYKNCKE 456
Query: 433 FAEDVRLTFHNAMTYNPKGQDV 454
F D+ L F N + YN D+
Sbjct: 457 FYSDILLVFDNCVLYNGSENDI 478
>gi|298708786|emb|CBJ30746.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 262
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 71/131 (54%), Gaps = 6/131 (4%)
Query: 372 FKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPK 431
+ S ++ F PV+ K +G+ DY I+++PMDLGTV+T+L + Y+ +
Sbjct: 9 LQQVSKIVNSFFNKPETLAFREPVNPKAMGIPDYPQIVKNPMDLGTVRTKLEEGRYERAE 68
Query: 432 EFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIE-SEYNREMRIGADYEMGF 490
+ A DVRL + N + YN G + ++A L K FE+++ ++ +E R+ + A E
Sbjct: 69 DVARDVRLIWSNCILYNSPGSEFGLLAAGLAKKFEERFSRVKTAEKERDRKPSAKSE--- 125
Query: 491 HTPTSRKAPPL 501
P + KAP L
Sbjct: 126 --PVNTKAPTL 134
>gi|328770698|gb|EGF80739.1| hypothetical protein BATDEDRAFT_88064 [Batrachochytrium
dendrobatidis JAM81]
Length = 897
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 55/101 (54%), Gaps = 3/101 (2%)
Query: 372 FKSCSALLEKLMKHKHG---WVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYK 428
K CS + +L K H F PVD LG+ Y +II PMDL T++ +L+ Y+
Sbjct: 464 LKFCSYIQRELSKKHHSPYNLPFLVPVDPIALGIPHYRSIITRPMDLSTMRKKLDNGDYE 523
Query: 429 SPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKW 469
EF D+RL +N T+NP G DV+ + ++L F +KW
Sbjct: 524 HASEFEADMRLMLNNCYTFNPPGTDVYNLGKRLEGAFNNKW 564
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 59/101 (58%), Gaps = 13/101 (12%)
Query: 534 SRTPAPKKPKAKDPHKR-------------DMTYDEKQKLSTNLQSLPSEKLDNIVQIIK 580
+R PAPK + + KR ++TY++K++LS ++ LP E+L +++IIK
Sbjct: 751 TRLPAPKPDRRRSITKRARPNDSDDENEPEEITYEQKRELSESIDLLPHERLCTVLEIIK 810
Query: 581 KRNSSLFQHDDEIEVDIDSVDAETLWELDRFVTNYKKSLSK 621
+ ++EI +DIDS+D LW+L +FV + +S+SK
Sbjct: 811 ENAQLNTTGEEEIVLDIDSLDKSVLWKLYKFVRKHTRSISK 851
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 66/163 (40%), Gaps = 18/163 (11%)
Query: 343 AESNKKSKL--NGKKQAGNELAHGFGTGSKIFKSCSALLEKLMKHKHGWVFNAPVDVKNL 400
+ES SKL +G+ A N K S L + K K +F PVD L
Sbjct: 278 SESFLDSKLPFSGEHAASNMATDSLLLFKDQIKWFSGLTRNMRKRKDAVIFLVPVDPIAL 337
Query: 401 GLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQ 460
+ Y T+I+ PMD+ T+ +L Y D L F+N T+N V +MA+
Sbjct: 338 NIPTYSTVIKQPMDISTIDKKLQNKGYSDVATIKADFELMFNNCYTFNGADSQVSVMAKN 397
Query: 461 LLKIFEDKWVVIESEYNREMRIGADYEMGFHTPTSRKAPPLPP 503
L W Y++E+ + F P RK P PP
Sbjct: 398 L-----QAW------YHKELE---KLPLTFRPPVDRK--PKPP 424
>gi|428171952|gb|EKX40865.1| hypothetical protein GUITHDRAFT_75230, partial [Guillardia theta
CCMP2712]
Length = 87
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 46/72 (63%)
Query: 395 VDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDV 454
VD L + YF II+HPMDLGTV+++L YK FA DVRLTF NAM +NP G V
Sbjct: 1 VDPIALDIPTYFEIIKHPMDLGTVRSKLISGSYKDINAFAADVRLTFDNAMLFNPVGHWV 60
Query: 455 HIMAEQLLKIFE 466
H MA+ L FE
Sbjct: 61 HEMAKNLKSFFE 72
>gi|195350536|ref|XP_002041796.1| GM11349 [Drosophila sechellia]
gi|194123601|gb|EDW45644.1| GM11349 [Drosophila sechellia]
Length = 2950
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Query: 379 LEKLMKHKHGWV-FNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
LEKL + + V F PVD + LG+ DYF I++ PMDLGT++T + Y P E+ +DV
Sbjct: 1473 LEKLYRQEPESVPFRYPVDPQALGIPDYFEIVKKPMDLGTIRTNIQNGKYSDPWEYVDDV 1532
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFE 466
L F NA YN K V+ +L ++FE
Sbjct: 1533 WLMFDNAWLYNRKTSRVYRYCTKLSEVFE 1561
>gi|148235036|ref|NP_001088637.1| CREB binding protein [Xenopus laevis]
gi|55249595|gb|AAH86282.1| LOC495689 protein [Xenopus laevis]
Length = 2428
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 50/78 (64%)
Query: 391 FNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPK 450
F PVD + LG+ DYF I+++PMDL T+K +L+ Y+ P ++ EDV L F+NA YN K
Sbjct: 1102 FRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKLDTGQYQEPWQYVEDVWLMFNNAWLYNRK 1161
Query: 451 GQDVHIMAEQLLKIFEDK 468
V+ +L ++FE +
Sbjct: 1162 TSRVYKYCTKLAEVFEQE 1179
>gi|443920353|gb|ELU40290.1| transcription initiation factor TFIID subunit 2 [Rhizoctonia solani
AG-1 IA]
Length = 1574
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 54/100 (54%)
Query: 375 CSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFA 434
C A+L L ++ H VF PVD +YFT+I+HPMDL T+K +L+ YK EF
Sbjct: 1400 CKAVLNALHRNPHAAVFRLPVDPVRDNAPNYFTVIKHPMDLSTMKAKLDNKIYKDRAEFE 1459
Query: 435 EDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIES 474
ED +L NA YN V A L K F D+W I++
Sbjct: 1460 EDFKLMIQNAKIYNAPLSFVFNEAIALEKAFNDRWTKIDA 1499
>gi|194890403|ref|XP_001977304.1| GG18963 [Drosophila erecta]
gi|190648953|gb|EDV46231.1| GG18963 [Drosophila erecta]
Length = 3296
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Query: 379 LEKLMKHKHGWV-FNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
LEKL + + V F PVD + LG+ DYF I++ PMDLGT++T + Y P E+ +DV
Sbjct: 1712 LEKLYRQEPESVPFRYPVDPQALGIPDYFEIVKKPMDLGTIRTNIQNGKYSDPWEYVDDV 1771
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFE 466
L F NA YN K V+ +L ++FE
Sbjct: 1772 WLMFDNAWLYNRKTSRVYRYCTKLSEVFE 1800
>gi|49117594|gb|AAH72594.1| Crebbp protein, partial [Mus musculus]
Length = 1589
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 59/106 (55%), Gaps = 7/106 (6%)
Query: 370 KIFK------SCSALLEKLMKH-KHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
KIFK + LE L + F PVD + LG+ DYF I+++PMDL T+K +L
Sbjct: 1084 KIFKPEELRQALMPTLEALYRQDPESLPFRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKL 1143
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
+ Y+ P ++ +DV L F+NA YN K V+ +L ++FE +
Sbjct: 1144 DTGQYQEPWQYVDDVWLMFNNAWLYNRKTSRVYKFCSKLAEVFEQE 1189
>gi|442615712|ref|NP_001259387.1| nejire, isoform E [Drosophila melanogaster]
gi|440216591|gb|AGB95230.1| nejire, isoform E [Drosophila melanogaster]
Length = 3266
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Query: 379 LEKLMKHKHGWV-FNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
LEKL + + V F PVD + LG+ DYF I++ PMDLGT++T + Y P E+ +DV
Sbjct: 1710 LEKLYRQEPESVPFRYPVDPQALGIPDYFEIVKKPMDLGTIRTNIQNGKYSDPWEYVDDV 1769
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFE 466
L F NA YN K V+ +L ++FE
Sbjct: 1770 WLMFDNAWLYNRKTSRVYRYCTKLSEVFE 1798
>gi|428178605|gb|EKX47480.1| hypothetical protein GUITHDRAFT_50108, partial [Guillardia theta
CCMP2712]
Length = 90
Score = 76.6 bits (187), Expect = 4e-11, Method: Composition-based stats.
Identities = 38/85 (44%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
Query: 378 LLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKS-PKEFAED 436
+L+K+ KH W F PVD K L L DY I++ PMDL T+++RL YK +EF D
Sbjct: 2 VLDKVSNDKHAWPFEEPVDAKKLKLKDYHKIVKEPMDLSTIRSRLQGEEYKRVEEEFHRD 61
Query: 437 VRLTFHNAMTYNPKGQDVHIMAEQL 461
+ L F NA+ +N +G +H AEQL
Sbjct: 62 MHLVFDNALLFNHEGDPIHEYAEQL 86
>gi|24640865|ref|NP_524642.2| nejire, isoform B [Drosophila melanogaster]
gi|320541926|ref|NP_001188576.1| nejire, isoform D [Drosophila melanogaster]
gi|22833041|gb|AAF46516.2| nejire, isoform B [Drosophila melanogaster]
gi|318069357|gb|ADV37658.1| nejire, isoform D [Drosophila melanogaster]
Length = 3276
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Query: 379 LEKLMKHKHGWV-FNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
LEKL + + V F PVD + LG+ DYF I++ PMDLGT++T + Y P E+ +DV
Sbjct: 1710 LEKLYRQEPESVPFRYPVDPQALGIPDYFEIVKKPMDLGTIRTNIQNGKYSDPWEYVDDV 1769
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFE 466
L F NA YN K V+ +L ++FE
Sbjct: 1770 WLMFDNAWLYNRKTSRVYRYCTKLSEVFE 1798
>gi|440293462|gb|ELP86579.1| bromodomain containing protein, putative [Entamoeba invadens IP1]
Length = 275
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 107/246 (43%), Gaps = 37/246 (15%)
Query: 375 CSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFA 434
C + KLM G FN PVD L + Y T+I++PMDLGT+K +L Y + EF
Sbjct: 9 CKDINRKLMSQDEGVAFNTPVDPVALRVPTYPTVIKYPMDLGTIKRKLGDKKYTTKDEFY 68
Query: 435 EDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRIGADYEMGFHTPT 494
DV LTF +A+ +N +VH A +L +F W G PT
Sbjct: 69 MDVILTFQDAIYFNHPESEVHHWAVKLEGLFLKLWTT---------------AFGATKPT 113
Query: 495 SRKAPPLPPPLDMRRILDRSESI-THPMDSRLKPISTT--PSSRTPAPKKPKAKDPHKRD 551
+ +D R + S+++ T P++ L P+ + PS K K K KR
Sbjct: 114 A---------VDPRLPIALSQTVGTAPLEP-LTPLYSLLNPSETGIEKNKAKTKKSSKRG 163
Query: 552 ---MTYDEKQKLSTNLQSLP--SEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDAETLW 606
T E QKL +L+++ EK+ + +II+ E+ + + S E L
Sbjct: 164 EKIFTDAELQKLKCDLKTIEKDKEKMRRVFEIIRVDRKG----KAEVSISLKSCTNEQLK 219
Query: 607 ELDRFV 612
EL V
Sbjct: 220 ELQEVV 225
>gi|320541924|ref|NP_001188575.1| nejire, isoform C [Drosophila melanogaster]
gi|318069356|gb|ADV37657.1| nejire, isoform C [Drosophila melanogaster]
Length = 3282
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Query: 379 LEKLMKHKHGWV-FNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
LEKL + + V F PVD + LG+ DYF I++ PMDLGT++T + Y P E+ +DV
Sbjct: 1716 LEKLYRQEPESVPFRYPVDPQALGIPDYFEIVKKPMDLGTIRTNIQNGKYSDPWEYVDDV 1775
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFE 466
L F NA YN K V+ +L ++FE
Sbjct: 1776 WLMFDNAWLYNRKTSRVYRYCTKLSEVFE 1804
>gi|405951463|gb|EKC19373.1| Bromodomain adjacent to zinc finger domain protein 2B [Crassostrea
gigas]
Length = 2317
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 51/95 (53%), Gaps = 2/95 (2%)
Query: 375 CSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFA 434
C +L ++ KH GW F PV+ K + + IR PMD T+K +L N YK+ +FA
Sbjct: 2200 CRLILTEMDKHDDGWPFLKPVNFKQFPAYKKY--IRQPMDFTTMKNKLRDNQYKTRGDFA 2257
Query: 435 EDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKW 469
DVRL F+N T+N +V + K FE +W
Sbjct: 2258 ADVRLIFNNCQTFNEDDSEVGRAGHNMRKFFEVRW 2292
>gi|195481738|ref|XP_002101759.1| GE15438 [Drosophila yakuba]
gi|194189283|gb|EDX02867.1| GE15438 [Drosophila yakuba]
Length = 3304
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Query: 379 LEKLMKHKHGWV-FNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
LEKL + + V F PVD + LG+ DYF I++ PMDLGT++T + Y P E+ +DV
Sbjct: 1724 LEKLYRQEPESVPFRYPVDPQALGIPDYFEIVKKPMDLGTIRTNIQNGKYSDPWEYVDDV 1783
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFE 466
L F NA YN K V+ +L ++FE
Sbjct: 1784 WLMFDNAWLYNRKTSRVYRYCTKLSEVFE 1812
>gi|167381013|ref|XP_001735535.1| bromodomain-containing factor [Entamoeba dispar SAW760]
gi|165902414|gb|EDR28252.1| bromodomain-containing factor, putative [Entamoeba dispar SAW760]
Length = 388
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 53/98 (54%)
Query: 372 FKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPK 431
+ C L KLM FN PVD L + YF++I+ PMDLGT+K L+ Y + +
Sbjct: 100 LRKCKELNRKLMNQPESPAFNTPVDPVALQVPTYFSVIKRPMDLGTIKHNLSDKKYITKE 159
Query: 432 EFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKW 469
EF D+ L F NA+ +N +V+ A +L K FE W
Sbjct: 160 EFQADMLLVFDNALLFNHPDSEVYHWAVKLKKQFETLW 197
>gi|343426742|emb|CBQ70270.1| conserved hypothetical protein [Sporisorium reilianum SRZ2]
Length = 809
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 57/100 (57%), Gaps = 2/100 (2%)
Query: 370 KIFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKS 429
K + S LL ++ H HG +F+AP+ K DY+T+IR P+D+ T+K R+ + S
Sbjct: 703 KTAQVLSMLLTEVSNHTHGNLFHAPI--KEQDAPDYYTLIRQPLDIKTIKARIKEGSIAS 760
Query: 430 PKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKW 469
K+ + + L F N++ YN G +VH MA ++ E+ +
Sbjct: 761 AKQLRKALTLMFANSLIYNRPGTEVHRMASEMFAASEEIF 800
>gi|303390444|ref|XP_003073453.1| putative bromodomain-containing transcription factor
[Encephalitozoon intestinalis ATCC 50506]
gi|303302599|gb|ADM12093.1| putative bromodomain-containing transcription factor
[Encephalitozoon intestinalis ATCC 50506]
Length = 371
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 55/94 (58%)
Query: 372 FKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPK 431
K CS +L +L ++ + F PVD LG+ DY I+HPMDL T++ +L+ Y+ +
Sbjct: 17 LKYCSQILTRLKRNSNAPPFLEPVDPVKLGIPDYPEKIKHPMDLSTIRKKLDHKEYEGVE 76
Query: 432 EFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIF 465
F D++L F+N TYNP G VH M + L ++
Sbjct: 77 GFDGDMKLMFNNCYTYNPPGTVVHDMGKALETVY 110
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/258 (21%), Positives = 110/258 (42%), Gaps = 58/258 (22%)
Query: 366 GTGSKIFKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G ++ ++ CS +L LM+ KH W F PVD + + Y++II+ PMD+ T++ +L
Sbjct: 149 GMKTEDYEFCSEVLADLMRPKHKAYNWPFLEPVDAELVP--GYYSIIKEPMDMQTIRIKL 206
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRI 482
+ Y+S EF D+ L N +N G +V+
Sbjct: 207 EQRKYQSTDEFERDLELIVENCKKFNAPGTEVY-------------------------EC 241
Query: 483 GADYEMGFHTPTSRKAPPLPPPLDM--------RRILDRSESITHPMDSRLKPISTTPSS 534
G ++E + PP D+ R+I+ + I ++S+L + S+
Sbjct: 242 GQEFEKAVKAHMQKS-----PPGDIKGRISELKRKIMSYTREIRM-LESKLAEQTGETSA 295
Query: 535 RTPAPKKPKAKDPHKRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIE 594
R + E+ + + ++ ++ +++ +I+ K + F +DEIE
Sbjct: 296 --------------SRAYSLSERVSIGNAILNMSKDQTESVAKIVLKNGAGEFVENDEIE 341
Query: 595 VDIDSVDAETLWELDRFV 612
VD+ ++ + E+D ++
Sbjct: 342 VDMRTIPDHVVEEIDMYI 359
>gi|443920352|gb|ELU40289.1| Bromodomain-containing protein [Rhizoctonia solani AG-1 IA]
Length = 403
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 55/106 (51%)
Query: 373 KSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKE 432
K C +L L + ++ ++F PVD G Y I+HPMDLGT+ T+L Y++ +
Sbjct: 168 KRCERILASLRRAENAFIFERPVDPIKDGCPTYLDEIKHPMDLGTMSTKLRNGKYRTMND 227
Query: 433 FAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNR 478
F DV L N +NP G + AE L +F+ +W I +E R
Sbjct: 228 FKLDVELIVSNCRAFNPPGTFPVLAAEALEAVFKREWSKINTEPRR 273
>gi|396081966|gb|AFN83580.1| putative bromodomain-containing transcription factor
[Encephalitozoon romaleae SJ-2008]
Length = 370
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 56/96 (58%)
Query: 372 FKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPK 431
K CS +L ++ ++ + F PVD LG+ DY I++PMDL T++ +L+ Y P+
Sbjct: 17 LKYCSQVLTRIKRNSNAPPFLEPVDPVKLGIPDYPEKIKNPMDLSTIRKKLDAKEYSGPE 76
Query: 432 EFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFED 467
F +D++L F+N TYNP G VH M + L + D
Sbjct: 77 GFDDDMKLMFNNCYTYNPPGTIVHDMGKALESAYND 112
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 108/250 (43%), Gaps = 42/250 (16%)
Query: 366 GTGSKIFKSCSALLEKLMKHKH---GWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
G ++ ++ CS +L L+K KH W F PVD +L + Y+++I+ PMD+ T+K +L
Sbjct: 148 GMKAEDYEFCSEVLSDLVKPKHKSYNWPFLEPVD-GDL-VPGYYSVIKEPMDIQTMKNKL 205
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVIESEYNREMRI 482
++ Y S +EF D+ L N +N G +V+ ++ E +
Sbjct: 206 DQRKYHSVEEFGRDLELIVENCKKFNAPGTEVYACGQEF-----------------EKAV 248
Query: 483 GADYEMGFHTPTSRKAPPLPPPLDMRRILDRSESITHPMDSRLKPISTTPSSRTPAPKKP 542
A E K L R+++ + I ++ PSSR
Sbjct: 249 KAHMEKTSPVDIKNKISELK-----RKVMSYTREIRMLESKLVEQTGEAPSSRA------ 297
Query: 543 KAKDPHKRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLFQHDDEIEVDIDSVDA 602
+ E+ + + ++ E+ +N+ +I+ K + F +DEIEVD+ ++
Sbjct: 298 ---------YSLSERVSIGNAILNMTKEQTENVAKIVLKNGAGEFVENDEIEVDMRTIPD 348
Query: 603 ETLWELDRFV 612
+ E+D ++
Sbjct: 349 HVVEEIDMYI 358
>gi|299756392|ref|XP_001829302.2| TATA-binding protein associated factor Taf2 [Coprinopsis cinerea
okayama7#130]
gi|298411655|gb|EAU92262.2| TATA-binding protein associated factor Taf2 [Coprinopsis cinerea
okayama7#130]
Length = 1794
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 57/111 (51%)
Query: 362 AHGFGTGSKIFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTR 421
A G + +K+C + L+KL +KH +F PVD +YF II+ PMDL T+ +
Sbjct: 1120 AQSAGMSIQDYKACKSALKKLKANKHALLFLQPVDPIRDHAPNYFDIIKEPMDLSTMGAK 1179
Query: 422 LNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKWVVI 472
L + YK F +D RL NA YN G VH A L FE +W +I
Sbjct: 1180 LEEGLYKDRFAFQQDFRLMIANAKLYNMVGSFVHNEAITLETFFEKQWSII 1230
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 47/97 (48%)
Query: 373 KSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKE 432
K LL+ L + +F PVD G Y I HPMD GT+ T+L + Y S ++
Sbjct: 1559 KKVKELLKTLTRIPEAAIFLRPVDPVLDGCPTYLDEIAHPMDFGTMNTKLQQGLYMSMED 1618
Query: 433 FAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDKW 469
+D+ L F N +NP G A+ + + F+ +W
Sbjct: 1619 VKKDIELIFANCRQFNPVGTFPVDCADIVERAFKKEW 1655
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 51/91 (56%), Gaps = 2/91 (2%)
Query: 373 KSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTII--RHPMDLGTVKTRLNKNWYKSP 430
+ A++ ++K WVF PVD LG+ YF +I + DL T++++L+ + Y +
Sbjct: 1669 RGLQAIMSTIVKEPVSWVFREPVDPVLLGIPTYFDVIPRKDARDLRTIRSKLDSDKYDTV 1728
Query: 431 KEFAEDVRLTFHNAMTYNPKGQDVHIMAEQL 461
+ + D+ L NA+ +N +V I+A+QL
Sbjct: 1729 EAWEADIDLMIANAIKFNGADSEVGIVAKQL 1759
>gi|255683523|ref|NP_001157494.1| CREB-binding protein [Bos taurus]
gi|296473434|tpg|DAA15549.1| TPA: CREB binding protein [Bos taurus]
Length = 2435
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 60/106 (56%), Gaps = 7/106 (6%)
Query: 370 KIFK------SCSALLEKLMKH-KHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
KIFK + + LE L + F PVD + LG+ DYF I+++PMDL T+K +L
Sbjct: 1086 KIFKPEELRQALMSTLEALYRQDPESLPFRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKL 1145
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
+ Y+ P ++ +DV L F+NA YN K V+ +L ++FE +
Sbjct: 1146 DTGQYQEPWQYVDDVWLMFNNAWLYNRKTSRVYKFCSKLAEVFEQE 1191
>gi|240981154|ref|XP_002403633.1| bromodomain-containing protein, putative [Ixodes scapularis]
gi|215491405|gb|EEC01046.1| bromodomain-containing protein, putative [Ixodes scapularis]
Length = 988
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 54/104 (51%), Gaps = 10/104 (9%)
Query: 370 KIFKSCSALLEKLMKHKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKS 429
K +C +L++L +HK W F PV+ K Y I+ PMD+ T++++L+ N YK
Sbjct: 886 KDLAACRQILDELEQHKDAWPFLLPVNTKQF--PSYRKFIKKPMDVSTMRSKLDANQYKG 943
Query: 430 PKEFAEDVRLTFHNAMTYN----PKGQDVHIMAEQLLKIFEDKW 469
EFA D RL F N T+N P GQ H M FE +W
Sbjct: 944 KDEFAVDARLIFDNCETFNEDDSPVGQAGHNMR----TFFESRW 983
>gi|68533141|dbj|BAE06125.1| CREBBP variant protein [Homo sapiens]
Length = 2472
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 59/106 (55%), Gaps = 7/106 (6%)
Query: 370 KIFK------SCSALLEKLMKH-KHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
KIFK + LE L + F PVD + LG+ DYF I+++PMDL T+K +L
Sbjct: 1113 KIFKPEELRQALMPTLEALYRQDPESLPFRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKL 1172
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
+ Y+ P ++ +DV L F+NA YN K V+ +L ++FE +
Sbjct: 1173 DTGQYQEPWQYVDDVWLMFNNAWLYNRKTSRVYKFCSKLAEVFEQE 1218
>gi|351700208|gb|EHB03127.1| CREB-binding protein [Heterocephalus glaber]
Length = 2098
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 50/78 (64%)
Query: 391 FNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPK 450
F PVD + LG+ DYF I+++PMDL T+K +L+ Y+ P ++ +DV L F+NA YN K
Sbjct: 1041 FRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKLDTGQYQEPWQYVDDVWLMFNNAWLYNRK 1100
Query: 451 GQDVHIMAEQLLKIFEDK 468
V+ +L ++FE +
Sbjct: 1101 TSRVYKFCSKLAEVFEQE 1118
>gi|397488302|ref|XP_003815207.1| PREDICTED: LOW QUALITY PROTEIN: CREB-binding protein [Pan paniscus]
Length = 2503
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 50/78 (64%)
Query: 391 FNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPK 450
F PVD + LG+ DYF I+++PMDL T+K +L+ Y+ P ++ +DV L F+NA YN K
Sbjct: 1172 FRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKLDTGQYQEPWQYVDDVWLMFNNAWLYNRK 1231
Query: 451 GQDVHIMAEQLLKIFEDK 468
V+ +L ++FE +
Sbjct: 1232 TSRVYKFCSKLAEVFEQE 1249
>gi|301779085|ref|XP_002924961.1| PREDICTED: LOW QUALITY PROTEIN: CREB-binding protein-like [Ailuropoda
melanoleuca]
Length = 2504
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 50/78 (64%)
Query: 391 FNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPK 450
F PVD + LG+ DYF I+++PMDL T+K +L+ Y+ P ++ +DV L F+NA YN K
Sbjct: 1210 FRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKLDTGQYQEPWQYVDDVWLMFNNAWLYNRK 1269
Query: 451 GQDVHIMAEQLLKIFEDK 468
V+ +L ++FE +
Sbjct: 1270 TSRVYKFCSKLAEVFEQE 1287
>gi|332845217|ref|XP_003315002.1| PREDICTED: CREB-binding protein isoform 1 [Pan troglodytes]
gi|410264670|gb|JAA20301.1| CREB binding protein [Pan troglodytes]
Length = 2404
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 59/106 (55%), Gaps = 7/106 (6%)
Query: 370 KIFK------SCSALLEKLMKH-KHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
KIFK + LE L + F PVD + LG+ DYF I+++PMDL T+K +L
Sbjct: 1045 KIFKPEELRQALMPTLEALYRQDPESLPFRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKL 1104
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
+ Y+ P ++ +DV L F+NA YN K V+ +L ++FE +
Sbjct: 1105 DTGQYQEPWQYVDDVWLMFNNAWLYNRKTSRVYKFCSKLAEVFEQE 1150
>gi|119943102|ref|NP_001073315.1| CREB-binding protein isoform b [Homo sapiens]
Length = 2404
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 59/106 (55%), Gaps = 7/106 (6%)
Query: 370 KIFK------SCSALLEKLMKH-KHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
KIFK + LE L + F PVD + LG+ DYF I+++PMDL T+K +L
Sbjct: 1045 KIFKPEELRQALMPTLEALYRQDPESLPFRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKL 1104
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
+ Y+ P ++ +DV L F+NA YN K V+ +L ++FE +
Sbjct: 1105 DTGQYQEPWQYVDDVWLMFNNAWLYNRKTSRVYKFCSKLAEVFEQE 1150
>gi|344292152|ref|XP_003417792.1| PREDICTED: LOW QUALITY PROTEIN: CREB-binding protein-like [Loxodonta
africana]
Length = 2438
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 50/78 (64%)
Query: 391 FNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPK 450
F PVD + LG+ DYF I+++PMDL T+K +L+ Y+ P ++ +DV L F+NA YN K
Sbjct: 1117 FRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKLDTGQYQEPWQYVDDVWLMFNNAWLYNRK 1176
Query: 451 GQDVHIMAEQLLKIFEDK 468
V+ +L ++FE +
Sbjct: 1177 TSRVYKFCSKLAEVFEQE 1194
>gi|403273432|ref|XP_003928520.1| PREDICTED: CREB-binding protein isoform 2 [Saimiri boliviensis
boliviensis]
Length = 2410
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 59/106 (55%), Gaps = 7/106 (6%)
Query: 370 KIFK------SCSALLEKLMKH-KHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
KIFK + LE L + F PVD + LG+ DYF I+++PMDL T+K +L
Sbjct: 1045 KIFKPEELRQALMPTLEALYRQDPESLPFRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKL 1104
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
+ Y+ P ++ +DV L F+NA YN K V+ +L ++FE +
Sbjct: 1105 DTGQYQEPWQYVDDVWLMFNNAWLYNRKTSRVYKFCSKLAEVFEQE 1150
>gi|380792581|gb|AFE68166.1| CREB-binding protein isoform a, partial [Macaca mulatta]
Length = 2205
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 50/78 (64%)
Query: 391 FNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPK 450
F PVD + LG+ DYF I+++PMDL T+K +L+ Y+ P ++ +DV L F+NA YN K
Sbjct: 1111 FRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKLDTGQYQEPWQYVDDVWLMFNNAWLYNRK 1170
Query: 451 GQDVHIMAEQLLKIFEDK 468
V+ +L ++FE +
Sbjct: 1171 TSRVYKFCSKLAEVFEQE 1188
>gi|297697969|ref|XP_002826106.1| PREDICTED: LOW QUALITY PROTEIN: CREB-binding protein [Pongo abelii]
Length = 2442
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 50/78 (64%)
Query: 391 FNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPK 450
F PVD + LG+ DYF I+++PMDL T+K +L+ Y+ P ++ +DV L F+NA YN K
Sbjct: 1114 FRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKLDTGQYQEPWQYVDDVWLMFNNAWLYNRK 1173
Query: 451 GQDVHIMAEQLLKIFEDK 468
V+ +L ++FE +
Sbjct: 1174 TSRVYKFCSKLAEVFEQE 1191
>gi|81911066|sp|Q6JHU9.1|CBP_RAT RecName: Full=CREB-binding protein
gi|38505359|gb|AAR23149.1| CREB-binding protein [Rattus norvegicus]
Length = 2442
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 50/78 (64%)
Query: 391 FNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPK 450
F PVD + LG+ DYF I+++PMDL T+K +L+ Y+ P ++ +DV L F+NA YN K
Sbjct: 1112 FRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKLDTGQYQEPWQYVDDVWLMFNNAWLYNRK 1171
Query: 451 GQDVHIMAEQLLKIFEDK 468
V+ +L ++FE +
Sbjct: 1172 TSRVYKFCSKLAEVFEQE 1189
>gi|403273430|ref|XP_003928519.1| PREDICTED: CREB-binding protein isoform 1 [Saimiri boliviensis
boliviensis]
Length = 2448
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 59/106 (55%), Gaps = 7/106 (6%)
Query: 370 KIFK------SCSALLEKLMKH-KHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRL 422
KIFK + LE L + F PVD + LG+ DYF I+++PMDL T+K +L
Sbjct: 1083 KIFKPEELRQALMPTLEALYRQDPESLPFRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKL 1142
Query: 423 NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLKIFEDK 468
+ Y+ P ++ +DV L F+NA YN K V+ +L ++FE +
Sbjct: 1143 DTGQYQEPWQYVDDVWLMFNNAWLYNRKTSRVYKFCSKLAEVFEQE 1188
>gi|357611203|gb|EHJ67366.1| hypothetical protein KGM_19207 [Danaus plexippus]
Length = 2058
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Query: 379 LEKLMK-HKHGWVFNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDV 437
LEKL + F PVD + LG+ DYF I+ P+DL T+K +L++ YK P E+ +DV
Sbjct: 1012 LEKLFRLDPESLPFRQPVDAQALGIPDYFEIVTRPIDLSTIKMKLDRGEYKDPWEYVDDV 1071
Query: 438 RLTFHNAMTYNPKGQDVHIMAEQLLKIFE 466
L F NA YN K V+ +L ++FE
Sbjct: 1072 WLMFENAWLYNRKNSRVYRYCTKLSEVFE 1100
>gi|348584002|ref|XP_003477761.1| PREDICTED: CREB-binding protein-like isoform 2 [Cavia porcellus]
Length = 2403
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 50/78 (64%)
Query: 391 FNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPK 450
F PVD + LG+ DYF I+++PMDL T+K +L+ Y+ P ++ +DV L F+NA YN K
Sbjct: 1077 FRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKLDTGQYQEPWQYVDDVWLMFNNAWLYNRK 1136
Query: 451 GQDVHIMAEQLLKIFEDK 468
V+ +L ++FE +
Sbjct: 1137 TSRVYKFCSKLAEVFEQE 1154
>gi|348584000|ref|XP_003477760.1| PREDICTED: CREB-binding protein-like isoform 1 [Cavia porcellus]
Length = 2441
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 50/78 (64%)
Query: 391 FNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPK 450
F PVD + LG+ DYF I+++PMDL T+K +L+ Y+ P ++ +DV L F+NA YN K
Sbjct: 1115 FRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKLDTGQYQEPWQYVDDVWLMFNNAWLYNRK 1174
Query: 451 GQDVHIMAEQLLKIFEDK 468
V+ +L ++FE +
Sbjct: 1175 TSRVYKFCSKLAEVFEQE 1192
>gi|332240178|ref|XP_003269267.1| PREDICTED: CREB-binding protein [Nomascus leucogenys]
Length = 2442
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 50/78 (64%)
Query: 391 FNAPVDVKNLGLHDYFTIIRHPMDLGTVKTRLNKNWYKSPKEFAEDVRLTFHNAMTYNPK 450
F PVD + LG+ DYF I+++PMDL T+K +L+ Y+ P ++ +DV L F+NA YN K
Sbjct: 1111 FRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKLDTGQYQEPWQYVDDVWLMFNNAWLYNRK 1170
Query: 451 GQDVHIMAEQLLKIFEDK 468
V+ +L ++FE +
Sbjct: 1171 TSRVYKFCSKLAEVFEQE 1188
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.306 0.123 0.335
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,222,544,497
Number of Sequences: 23463169
Number of extensions: 502216618
Number of successful extensions: 4722703
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 13349
Number of HSP's successfully gapped in prelim test: 13869
Number of HSP's that attempted gapping in prelim test: 3704736
Number of HSP's gapped (non-prelim): 561015
length of query: 715
length of database: 8,064,228,071
effective HSP length: 150
effective length of query: 565
effective length of database: 8,839,720,017
effective search space: 4994441809605
effective search space used: 4994441809605
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (22.0 bits)
S2: 81 (35.8 bits)