Query 005071
Match_columns 715
No_of_seqs 409 out of 2023
Neff 5.7
Searched_HMMs 29240
Date Mon Mar 25 14:29:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005071.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/005071hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gsl_A Ubiquitin-like modifier 100.0 4E-146 1E-150 1242.3 50.9 602 13-696 7-614 (615)
2 3vh1_A Ubiquitin-like modifier 100.0 4E-133 1E-137 1135.4 45.0 585 13-679 8-598 (598)
3 3rui_A Ubiquitin-like modifier 100.0 4.8E-82 1.6E-86 678.5 33.5 332 333-708 3-337 (340)
4 3vx8_D Ubiquitin-like modifier 100.0 7.4E-81 2.5E-85 666.3 27.4 317 12-332 6-323 (323)
5 3vx6_A E1; 2.60A {Kluyveromyce 100.0 2.9E-75 1E-79 611.6 17.8 276 11-334 5-283 (283)
6 3t7h_A Ubiquitin-like modifier 100.0 3.9E-74 1.3E-78 606.3 20.2 279 13-329 7-291 (291)
7 3h8v_A Ubiquitin-like modifier 100.0 5E-44 1.7E-48 377.6 21.4 239 345-659 13-274 (292)
8 1zud_1 Adenylyltransferase THI 100.0 5.6E-42 1.9E-46 354.5 26.2 234 345-659 6-246 (251)
9 1jw9_B Molybdopterin biosynthe 100.0 4.7E-41 1.6E-45 347.1 25.6 233 346-658 10-249 (249)
10 3h5n_A MCCB protein; ubiquitin 100.0 6.9E-41 2.4E-45 362.5 23.0 242 345-659 92-352 (353)
11 1tt5_B Ubiquitin-activating en 100.0 4.7E-36 1.6E-40 332.5 24.8 224 360-659 36-341 (434)
12 2nvu_B Maltose binding protein 100.0 4.5E-34 1.6E-38 338.1 25.4 225 359-659 405-712 (805)
13 1y8q_A Ubiquitin-like 1 activa 100.0 6.1E-32 2.1E-36 291.8 24.2 154 345-519 16-171 (346)
14 1y8q_B Anthracycline-, ubiquit 100.0 9.4E-32 3.2E-36 308.7 22.7 190 353-604 6-200 (640)
15 1tt5_A APPBP1, amyloid protein 100.0 1.6E-32 5.5E-37 311.2 12.5 214 342-601 9-231 (531)
16 3cmm_A Ubiquitin-activating en 100.0 1.3E-31 4.5E-36 321.8 18.2 233 310-602 359-616 (1015)
17 3cmm_A Ubiquitin-activating en 99.9 1.2E-27 4E-32 287.6 19.0 148 345-516 7-157 (1015)
18 3jyo_A Quinate/shikimate dehyd 98.1 8E-06 2.7E-10 85.7 8.8 80 361-483 124-203 (283)
19 3tnl_A Shikimate dehydrogenase 97.8 5.9E-05 2E-09 80.3 11.1 85 361-483 151-235 (315)
20 3ic5_A Putative saccharopine d 97.8 0.00014 4.8E-09 63.8 11.8 95 364-505 5-99 (118)
21 3t4e_A Quinate/shikimate dehyd 97.6 0.00019 6.5E-09 76.3 10.8 85 362-484 146-230 (312)
22 4ina_A Saccharopine dehydrogen 97.4 0.0007 2.4E-08 74.1 11.6 101 365-505 2-106 (405)
23 3abi_A Putative uncharacterize 97.3 0.00044 1.5E-08 74.3 9.3 94 363-506 15-108 (365)
24 3tum_A Shikimate dehydrogenase 97.3 0.00044 1.5E-08 72.0 8.7 57 362-440 123-179 (269)
25 2g1u_A Hypothetical protein TM 97.3 0.0022 7.4E-08 60.1 12.1 95 360-500 15-111 (155)
26 3llv_A Exopolyphosphatase-rela 97.2 0.0021 7.1E-08 58.9 10.7 94 363-503 5-99 (141)
27 2egg_A AROE, shikimate 5-dehyd 97.1 0.00064 2.2E-08 71.5 7.4 76 362-484 139-214 (297)
28 3pwz_A Shikimate dehydrogenase 97.1 0.00069 2.4E-08 70.6 7.6 35 362-396 118-152 (272)
29 2hmt_A YUAA protein; RCK, KTN, 97.1 0.0018 6.2E-08 58.5 9.0 36 361-397 3-38 (144)
30 2z2v_A Hypothetical protein PH 97.0 0.0013 4.4E-08 71.2 8.6 94 363-506 15-108 (365)
31 3o8q_A Shikimate 5-dehydrogena 96.9 0.0017 5.9E-08 67.9 7.8 50 362-433 124-173 (281)
32 1id1_A Putative potassium chan 96.9 0.0081 2.8E-07 56.0 11.6 93 363-498 2-95 (153)
33 1lss_A TRK system potassium up 96.8 0.0072 2.4E-07 54.3 10.7 90 364-499 4-94 (140)
34 3oj0_A Glutr, glutamyl-tRNA re 96.8 0.0013 4.6E-08 60.8 5.8 32 364-396 21-52 (144)
35 1lu9_A Methylene tetrahydromet 96.8 0.003 1E-07 65.4 9.0 80 362-483 117-197 (287)
36 3c85_A Putative glutathione-re 96.8 0.0053 1.8E-07 58.8 10.1 91 362-499 37-130 (183)
37 3fbt_A Chorismate mutase and s 96.8 0.0012 4.1E-08 69.2 5.8 35 362-396 120-154 (282)
38 3don_A Shikimate dehydrogenase 96.7 0.00089 3E-08 70.0 4.3 37 361-397 114-150 (277)
39 3dfz_A SIRC, precorrin-2 dehyd 96.7 0.0019 6.4E-08 65.6 6.1 91 361-502 28-118 (223)
40 3phh_A Shikimate dehydrogenase 96.6 0.009 3.1E-07 62.2 10.7 105 364-505 118-230 (269)
41 2axq_A Saccharopine dehydrogen 96.6 0.0057 2E-07 68.3 9.6 37 361-397 20-56 (467)
42 3u62_A Shikimate dehydrogenase 96.5 0.0011 3.8E-08 68.2 3.3 35 362-397 107-141 (253)
43 3e8x_A Putative NAD-dependent 96.5 0.01 3.4E-07 58.7 10.1 39 357-396 14-53 (236)
44 1gpj_A Glutamyl-tRNA reductase 96.5 0.0054 1.8E-07 67.0 8.7 35 362-396 165-199 (404)
45 3l4b_C TRKA K+ channel protien 96.4 0.015 5E-07 57.4 10.7 90 366-501 2-93 (218)
46 3rku_A Oxidoreductase YMR226C; 96.4 0.016 5.4E-07 60.0 11.4 87 359-483 28-124 (287)
47 3fwz_A Inner membrane protein 96.4 0.031 1.1E-06 51.4 12.0 88 364-498 7-95 (140)
48 1ff9_A Saccharopine reductase; 96.2 0.0086 2.9E-07 66.5 8.5 35 363-398 2-36 (450)
49 1pjc_A Protein (L-alanine dehy 96.2 0.013 4.4E-07 63.0 9.5 35 361-396 164-198 (361)
50 2ph5_A Homospermidine synthase 96.2 0.014 5E-07 65.2 10.1 99 364-507 13-115 (480)
51 2hk9_A Shikimate dehydrogenase 96.2 0.0038 1.3E-07 64.5 5.0 34 362-396 127-160 (275)
52 3d1l_A Putative NADP oxidoredu 96.2 0.012 4.2E-07 59.6 8.8 92 363-506 9-102 (266)
53 2gn4_A FLAA1 protein, UDP-GLCN 96.1 0.017 5.7E-07 61.1 9.9 81 361-483 18-100 (344)
54 1jay_A Coenzyme F420H2:NADP+ o 96.1 0.024 8.2E-07 55.3 9.9 97 366-509 2-100 (212)
55 3t4x_A Oxidoreductase, short c 96.0 0.026 9E-07 57.3 10.1 84 361-483 7-94 (267)
56 3ruf_A WBGU; rossmann fold, UD 96.0 0.066 2.3E-06 55.7 13.4 86 360-484 21-110 (351)
57 1xg5_A ARPG836; short chain de 96.0 0.043 1.5E-06 55.8 11.6 85 360-483 28-120 (279)
58 1p77_A Shikimate 5-dehydrogena 95.9 0.014 4.9E-07 60.1 8.0 34 362-396 117-150 (272)
59 1nyt_A Shikimate 5-dehydrogena 95.9 0.011 3.9E-07 60.8 7.2 34 362-396 117-150 (271)
60 1hdo_A Biliverdin IX beta redu 95.9 0.06 2E-06 51.2 11.8 33 364-397 3-36 (206)
61 3nyw_A Putative oxidoreductase 95.9 0.025 8.5E-07 57.0 9.4 63 361-446 4-68 (250)
62 3tri_A Pyrroline-5-carboxylate 95.9 0.023 8E-07 58.8 9.4 92 363-506 2-98 (280)
63 1kyq_A Met8P, siroheme biosynt 95.8 0.015 5.1E-07 60.7 7.6 37 361-398 10-46 (274)
64 3gvi_A Malate dehydrogenase; N 95.8 0.023 7.8E-07 60.6 9.2 37 361-397 4-40 (324)
65 2eez_A Alanine dehydrogenase; 95.8 0.022 7.5E-07 61.3 9.1 36 360-396 162-197 (369)
66 3qsg_A NAD-binding phosphogluc 95.8 0.037 1.2E-06 58.1 10.6 35 363-397 23-57 (312)
67 3o38_A Short chain dehydrogena 95.8 0.029 9.8E-07 56.6 9.4 62 361-446 19-82 (266)
68 3dtt_A NADP oxidoreductase; st 95.8 0.026 9.1E-07 57.0 9.0 111 360-509 15-127 (245)
69 1iy8_A Levodione reductase; ox 95.8 0.044 1.5E-06 55.4 10.7 84 361-483 10-101 (267)
70 1npy_A Hypothetical shikimate 95.7 0.024 8.2E-07 58.8 8.7 34 363-396 118-151 (271)
71 3lf2_A Short chain oxidoreduct 95.7 0.035 1.2E-06 56.3 9.5 91 361-483 5-96 (265)
72 2z1n_A Dehydrogenase; reductas 95.7 0.054 1.9E-06 54.5 10.8 34 362-396 5-39 (260)
73 2vhw_A Alanine dehydrogenase; 95.6 0.022 7.4E-07 61.7 8.3 35 361-396 165-199 (377)
74 2aef_A Calcium-gated potassium 95.6 0.038 1.3E-06 54.9 9.4 88 364-500 9-97 (234)
75 3nzo_A UDP-N-acetylglucosamine 95.6 0.047 1.6E-06 59.1 10.9 86 360-483 31-121 (399)
76 1y1p_A ARII, aldehyde reductas 95.6 0.028 9.4E-07 58.0 8.6 82 362-483 9-92 (342)
77 3qiv_A Short-chain dehydrogena 95.6 0.059 2E-06 53.7 10.7 82 361-483 6-95 (253)
78 3gt0_A Pyrroline-5-carboxylate 95.6 0.015 5.3E-07 58.5 6.4 32 365-396 3-37 (247)
79 1sby_A Alcohol dehydrogenase; 95.6 0.078 2.7E-06 53.0 11.6 35 362-396 3-38 (254)
80 1x7d_A Ornithine cyclodeaminas 95.6 0.029 9.8E-07 60.4 8.8 78 362-485 127-205 (350)
81 1fmc_A 7 alpha-hydroxysteroid 95.5 0.048 1.6E-06 54.1 9.6 35 361-396 8-43 (255)
82 3afn_B Carbonyl reductase; alp 95.4 0.068 2.3E-06 53.0 10.6 35 361-396 4-39 (258)
83 2rir_A Dipicolinate synthase, 95.4 0.034 1.2E-06 58.0 8.6 35 361-396 154-188 (300)
84 3i1j_A Oxidoreductase, short c 95.4 0.053 1.8E-06 53.8 9.6 36 360-396 10-46 (247)
85 2raf_A Putative dinucleotide-b 95.4 0.049 1.7E-06 53.8 9.1 36 361-397 16-51 (209)
86 1xu9_A Corticosteroid 11-beta- 95.3 0.075 2.6E-06 54.3 10.7 37 359-396 23-60 (286)
87 3pp8_A Glyoxylate/hydroxypyruv 95.3 0.022 7.5E-07 60.4 6.8 91 360-506 135-229 (315)
88 1pjq_A CYSG, siroheme synthase 95.3 0.06 2.1E-06 59.8 10.6 92 361-502 9-100 (457)
89 4e12_A Diketoreductase; oxidor 95.3 0.042 1.5E-06 56.7 8.8 32 365-397 5-36 (283)
90 3p7m_A Malate dehydrogenase; p 95.3 0.04 1.4E-06 58.6 8.7 36 362-397 3-38 (321)
91 2ew2_A 2-dehydropantoate 2-red 95.3 0.034 1.2E-06 57.0 8.0 31 365-396 4-34 (316)
92 3o26_A Salutaridine reductase; 95.3 0.055 1.9E-06 55.1 9.5 91 361-484 9-101 (311)
93 3i6i_A Putative leucoanthocyan 95.3 0.057 2E-06 56.5 9.7 102 362-503 8-115 (346)
94 3awd_A GOX2181, putative polyo 95.2 0.074 2.5E-06 53.0 10.1 35 361-396 10-45 (260)
95 3evt_A Phosphoglycerate dehydr 95.2 0.028 9.5E-07 59.9 7.3 36 360-396 133-168 (324)
96 2gas_A Isoflavone reductase; N 95.2 0.15 5.1E-06 51.9 12.6 97 364-499 2-103 (307)
97 3ai3_A NADPH-sorbose reductase 95.2 0.073 2.5E-06 53.6 10.1 34 362-396 5-39 (263)
98 3ioy_A Short-chain dehydrogena 95.2 0.046 1.6E-06 57.3 8.9 63 361-446 5-68 (319)
99 3vku_A L-LDH, L-lactate dehydr 95.2 0.047 1.6E-06 58.3 8.9 34 363-396 8-42 (326)
100 3dhn_A NAD-dependent epimerase 95.2 0.093 3.2E-06 51.0 10.4 73 365-485 5-78 (227)
101 4egb_A DTDP-glucose 4,6-dehydr 95.2 0.023 8E-07 59.1 6.3 35 362-396 22-58 (346)
102 2z1m_A GDP-D-mannose dehydrata 95.1 0.067 2.3E-06 55.1 9.6 34 362-396 1-35 (345)
103 3pqe_A L-LDH, L-lactate dehydr 95.1 0.048 1.6E-06 58.1 8.6 33 364-396 5-38 (326)
104 3cky_A 2-hydroxymethyl glutara 95.1 0.032 1.1E-06 57.4 7.0 32 364-396 4-35 (301)
105 3r6d_A NAD-dependent epimerase 95.1 0.13 4.5E-06 50.0 11.1 94 365-504 6-105 (221)
106 3rkr_A Short chain oxidoreduct 95.0 0.074 2.5E-06 53.7 9.5 83 360-483 25-115 (262)
107 1sb8_A WBPP; epimerase, 4-epim 95.0 0.18 6.2E-06 52.6 12.7 86 361-483 24-111 (352)
108 2h78_A Hibadh, 3-hydroxyisobut 95.0 0.03 1E-06 57.9 6.6 32 365-397 4-35 (302)
109 1nvt_A Shikimate 5'-dehydrogen 95.0 0.059 2E-06 55.8 8.8 34 362-397 126-159 (287)
110 3gvx_A Glycerate dehydrogenase 95.0 0.026 8.8E-07 59.3 6.0 36 360-396 118-153 (290)
111 1omo_A Alanine dehydrogenase; 95.0 0.065 2.2E-06 56.7 9.1 74 363-485 124-198 (322)
112 4huj_A Uncharacterized protein 95.0 0.029 1E-06 55.7 6.1 28 365-393 24-51 (220)
113 2i99_A MU-crystallin homolog; 94.9 0.034 1.2E-06 58.5 6.9 35 362-396 133-168 (312)
114 3pk0_A Short-chain dehydrogena 94.9 0.084 2.9E-06 53.4 9.6 62 361-446 7-69 (262)
115 1w6u_A 2,4-dienoyl-COA reducta 94.9 0.067 2.3E-06 54.7 8.9 37 359-396 21-58 (302)
116 3pef_A 6-phosphogluconate dehy 94.9 0.058 2E-06 55.5 8.3 33 365-398 2-34 (287)
117 2izz_A Pyrroline-5-carboxylate 94.9 0.083 2.8E-06 55.5 9.7 33 364-396 22-57 (322)
118 3qlj_A Short chain dehydrogena 94.9 0.12 4.1E-06 54.0 10.8 93 360-483 23-123 (322)
119 2gdz_A NAD+-dependent 15-hydro 94.9 0.069 2.4E-06 53.9 8.7 34 362-396 5-39 (267)
120 1ldn_A L-lactate dehydrogenase 94.9 0.075 2.6E-06 56.0 9.3 34 364-397 6-40 (316)
121 3uve_A Carveol dehydrogenase ( 94.9 0.18 6.1E-06 51.5 11.9 98 361-483 8-113 (286)
122 1qyc_A Phenylcoumaran benzylic 94.8 0.13 4.6E-06 52.3 10.9 97 364-499 4-104 (308)
123 3r1i_A Short-chain type dehydr 94.8 0.13 4.4E-06 52.7 10.7 36 360-396 28-64 (276)
124 2ewd_A Lactate dehydrogenase,; 94.8 0.061 2.1E-06 56.5 8.5 34 364-397 4-37 (317)
125 3gpi_A NAD-dependent epimerase 94.8 0.09 3.1E-06 53.2 9.4 33 363-396 2-34 (286)
126 1bg6_A N-(1-D-carboxylethyl)-L 94.8 0.072 2.5E-06 55.9 8.9 32 365-397 5-36 (359)
127 1yxm_A Pecra, peroxisomal tran 94.8 0.12 4.2E-06 52.9 10.4 36 360-396 14-50 (303)
128 3slg_A PBGP3 protein; structur 94.8 0.083 2.8E-06 55.6 9.3 39 358-397 18-58 (372)
129 2vns_A Metalloreductase steap3 94.8 0.053 1.8E-06 53.7 7.4 32 364-396 28-59 (215)
130 3tjr_A Short chain dehydrogena 94.7 0.11 3.9E-06 53.7 10.1 82 361-483 28-117 (301)
131 3imf_A Short chain dehydrogena 94.7 0.065 2.2E-06 54.0 8.1 35 361-396 3-38 (257)
132 2pzm_A Putative nucleotide sug 94.7 0.18 6E-06 52.4 11.6 38 359-397 15-53 (330)
133 3sx2_A Putative 3-ketoacyl-(ac 94.7 0.17 5.9E-06 51.3 11.2 95 360-483 9-111 (278)
134 2bd0_A Sepiapterin reductase; 94.7 0.15 5.2E-06 50.3 10.5 33 364-396 2-41 (244)
135 1lld_A L-lactate dehydrogenase 94.7 0.094 3.2E-06 54.6 9.4 34 364-397 7-41 (319)
136 2pnf_A 3-oxoacyl-[acyl-carrier 94.7 0.091 3.1E-06 51.8 8.9 34 362-396 5-39 (248)
137 3rwb_A TPLDH, pyridoxal 4-dehy 94.7 0.085 2.9E-06 52.9 8.7 36 360-396 2-38 (247)
138 1pzg_A LDH, lactate dehydrogen 94.7 0.12 4.2E-06 54.8 10.4 33 365-397 10-42 (331)
139 2ahr_A Putative pyrroline carb 94.7 0.049 1.7E-06 54.9 7.0 31 365-396 4-34 (259)
140 1np3_A Ketol-acid reductoisome 94.7 0.12 4.1E-06 54.9 10.3 37 359-396 11-47 (338)
141 3dqp_A Oxidoreductase YLBE; al 94.7 0.2 6.8E-06 48.6 11.2 90 366-504 2-103 (219)
142 3qvo_A NMRA family protein; st 94.6 0.25 8.5E-06 48.8 12.0 95 364-505 23-123 (236)
143 3fi9_A Malate dehydrogenase; s 94.6 0.064 2.2E-06 57.6 8.2 35 362-396 6-42 (343)
144 3tfo_A Putative 3-oxoacyl-(acy 94.6 0.11 3.9E-06 52.9 9.7 60 362-446 2-62 (264)
145 3h7a_A Short chain dehydrogena 94.6 0.13 4.5E-06 51.8 10.0 34 362-396 5-39 (252)
146 2d5c_A AROE, shikimate 5-dehyd 94.6 0.11 3.7E-06 53.0 9.4 35 361-397 114-148 (263)
147 3svt_A Short-chain type dehydr 94.6 0.17 5.8E-06 51.5 10.9 63 361-446 8-72 (281)
148 1qyd_A Pinoresinol-lariciresin 94.6 0.18 6E-06 51.5 11.1 97 364-499 4-107 (313)
149 4id9_A Short-chain dehydrogena 94.6 0.19 6.5E-06 52.1 11.5 39 358-397 13-52 (347)
150 3ucx_A Short chain dehydrogena 94.6 0.14 4.9E-06 51.7 10.2 35 361-396 8-43 (264)
151 4dgs_A Dehydrogenase; structur 94.6 0.062 2.1E-06 57.7 7.8 90 360-508 167-260 (340)
152 3l9w_A Glutathione-regulated p 94.6 0.087 3E-06 57.8 9.2 90 364-500 4-94 (413)
153 3pgx_A Carveol dehydrogenase; 94.6 0.24 8.1E-06 50.4 11.9 96 360-483 11-114 (280)
154 3hdj_A Probable ornithine cycl 94.5 0.052 1.8E-06 57.4 7.1 73 363-484 120-193 (313)
155 3k96_A Glycerol-3-phosphate de 94.5 0.06 2E-06 57.9 7.7 106 364-509 29-136 (356)
156 2gf2_A Hibadh, 3-hydroxyisobut 94.5 0.029 1E-06 57.5 5.0 30 366-396 2-31 (296)
157 1hyh_A L-hicdh, L-2-hydroxyiso 94.5 0.09 3.1E-06 55.0 8.8 32 365-396 2-34 (309)
158 2pd6_A Estradiol 17-beta-dehyd 94.5 0.055 1.9E-06 54.1 6.8 36 361-397 4-40 (264)
159 3lyl_A 3-oxoacyl-(acyl-carrier 94.5 0.099 3.4E-06 51.9 8.7 34 362-396 3-37 (247)
160 1z82_A Glycerol-3-phosphate de 94.5 0.029 1E-06 59.1 5.0 32 364-396 14-45 (335)
161 3l6d_A Putative oxidoreductase 94.5 0.13 4.4E-06 53.7 9.9 33 363-396 8-40 (306)
162 4fc7_A Peroxisomal 2,4-dienoyl 94.5 0.12 4E-06 52.8 9.4 37 359-396 22-59 (277)
163 3tl2_A Malate dehydrogenase; c 94.5 0.085 2.9E-06 55.9 8.5 35 363-397 7-41 (315)
164 2zat_A Dehydrogenase/reductase 94.5 0.14 4.7E-06 51.5 9.8 35 361-396 11-46 (260)
165 1spx_A Short-chain reductase f 94.5 0.12 4.2E-06 52.2 9.5 35 361-396 3-38 (278)
166 1hdc_A 3-alpha, 20 beta-hydrox 94.5 0.087 3E-06 53.0 8.3 35 361-396 2-37 (254)
167 3gaf_A 7-alpha-hydroxysteroid 94.5 0.11 3.6E-06 52.5 8.9 61 361-446 9-70 (256)
168 3doj_A AT3G25530, dehydrogenas 94.5 0.045 1.5E-06 57.3 6.3 37 361-398 18-54 (310)
169 2g5c_A Prephenate dehydrogenas 94.4 0.13 4.4E-06 52.5 9.6 32 365-396 2-34 (281)
170 2jah_A Clavulanic acid dehydro 94.4 0.19 6.3E-06 50.3 10.6 35 361-396 4-39 (247)
171 3v8b_A Putative dehydrogenase, 94.4 0.16 5.4E-06 52.2 10.3 35 361-396 25-60 (283)
172 3tsc_A Putative oxidoreductase 94.4 0.18 6.2E-06 51.2 10.6 95 361-483 8-110 (277)
173 3l77_A Short-chain alcohol deh 94.4 0.15 5.2E-06 50.1 9.8 32 364-396 2-34 (235)
174 2hq1_A Glucose/ribitol dehydro 94.4 0.19 6.6E-06 49.5 10.5 33 362-395 3-36 (247)
175 4e6p_A Probable sorbitol dehyd 94.4 0.16 5.6E-06 51.0 10.0 35 361-396 5-40 (259)
176 2zyd_A 6-phosphogluconate dehy 94.4 0.1 3.5E-06 58.4 9.2 36 361-397 12-47 (480)
177 3ftp_A 3-oxoacyl-[acyl-carrier 94.3 0.13 4.6E-06 52.4 9.4 36 360-396 24-60 (270)
178 4fs3_A Enoyl-[acyl-carrier-pro 94.3 0.12 4.1E-06 52.4 9.0 35 361-396 3-40 (256)
179 2cvz_A Dehydrogenase, 3-hydrox 94.3 0.092 3.1E-06 53.4 8.2 30 365-396 2-31 (289)
180 3rih_A Short chain dehydrogena 94.3 0.082 2.8E-06 54.8 7.9 36 361-397 38-74 (293)
181 3tzq_B Short-chain type dehydr 94.3 0.15 5.1E-06 51.8 9.7 36 361-397 8-44 (271)
182 3sju_A Keto reductase; short-c 94.3 0.16 5.5E-06 51.9 9.9 62 360-446 20-82 (279)
183 2d4a_B Malate dehydrogenase; a 94.3 0.14 4.8E-06 53.9 9.7 32 366-397 1-32 (308)
184 3enk_A UDP-glucose 4-epimerase 94.3 0.23 7.9E-06 51.3 11.3 32 364-396 5-37 (341)
185 4egf_A L-xylulose reductase; s 94.3 0.11 3.7E-06 52.8 8.5 36 360-396 16-52 (266)
186 2hjr_A Malate dehydrogenase; m 94.3 0.097 3.3E-06 55.6 8.5 34 364-397 14-47 (328)
187 2bgk_A Rhizome secoisolaricire 94.3 0.16 5.6E-06 50.9 9.8 36 360-396 12-48 (278)
188 2v6b_A L-LDH, L-lactate dehydr 94.3 0.13 4.5E-06 53.9 9.3 33 365-397 1-34 (304)
189 1vl6_A Malate oxidoreductase; 94.3 0.041 1.4E-06 60.1 5.5 37 361-397 189-225 (388)
190 1p9l_A Dihydrodipicolinate red 94.2 0.12 4.1E-06 52.9 8.8 31 366-396 2-34 (245)
191 1oaa_A Sepiapterin reductase; 94.2 0.1 3.6E-06 52.3 8.3 63 361-446 3-69 (259)
192 1yb1_A 17-beta-hydroxysteroid 94.2 0.18 6.2E-06 51.1 10.1 35 361-396 28-63 (272)
193 1oju_A MDH, malate dehydrogena 94.2 0.13 4.4E-06 54.0 9.2 32 366-397 2-34 (294)
194 3ce6_A Adenosylhomocysteinase; 94.2 0.064 2.2E-06 60.4 7.3 35 361-396 271-305 (494)
195 3i83_A 2-dehydropantoate 2-red 94.2 0.044 1.5E-06 57.5 5.6 33 365-398 3-35 (320)
196 3pxx_A Carveol dehydrogenase; 94.2 0.29 9.8E-06 49.6 11.5 95 360-483 6-108 (287)
197 1ae1_A Tropinone reductase-I; 94.2 0.22 7.5E-06 50.6 10.7 34 362-396 19-53 (273)
198 1x0v_A GPD-C, GPDH-C, glycerol 94.2 0.13 4.5E-06 54.1 9.3 108 365-506 9-124 (354)
199 4g65_A TRK system potassium up 94.2 0.099 3.4E-06 58.1 8.6 92 365-502 4-97 (461)
200 3rd5_A Mypaa.01249.C; ssgcid, 94.2 0.12 3.9E-06 53.1 8.6 37 360-397 12-49 (291)
201 1t2d_A LDH-P, L-lactate dehydr 94.2 0.15 5.3E-06 53.9 9.8 33 365-397 5-37 (322)
202 1vpd_A Tartronate semialdehyde 94.2 0.065 2.2E-06 55.0 6.7 31 365-396 6-36 (299)
203 2ae2_A Protein (tropinone redu 94.2 0.26 8.9E-06 49.5 11.0 34 362-396 7-41 (260)
204 2o23_A HADH2 protein; HSD17B10 94.2 0.21 7E-06 49.9 10.2 34 362-396 10-44 (265)
205 2f1k_A Prephenate dehydrogenas 94.2 0.12 4E-06 52.6 8.5 30 366-396 2-31 (279)
206 3ggo_A Prephenate dehydrogenas 94.1 0.15 5.1E-06 53.7 9.5 33 364-396 33-66 (314)
207 1xq1_A Putative tropinone redu 94.1 0.19 6.5E-06 50.3 9.8 34 362-396 12-46 (266)
208 3sc4_A Short chain dehydrogena 94.1 0.3 1E-05 50.0 11.6 67 362-446 7-74 (285)
209 1wma_A Carbonyl reductase [NAD 94.1 0.11 3.9E-06 51.6 8.2 33 363-396 3-37 (276)
210 2a9f_A Putative malic enzyme ( 94.1 0.046 1.6E-06 59.8 5.6 39 360-398 184-222 (398)
211 3tox_A Short chain dehydrogena 94.1 0.088 3E-06 54.1 7.5 35 361-396 5-40 (280)
212 4imr_A 3-oxoacyl-(acyl-carrier 94.1 0.16 5.4E-06 52.0 9.4 36 360-396 29-65 (275)
213 3f1l_A Uncharacterized oxidore 94.1 0.19 6.6E-06 50.4 9.8 36 360-396 8-44 (252)
214 2rhc_B Actinorhodin polyketide 94.1 0.24 8.1E-06 50.5 10.6 35 361-396 19-54 (277)
215 4g65_A TRK system potassium up 94.1 0.26 8.8E-06 54.8 11.6 98 362-505 233-331 (461)
216 3c1o_A Eugenol synthase; pheny 94.0 0.45 1.6E-05 48.7 12.8 96 364-499 4-104 (321)
217 4ibo_A Gluconate dehydrogenase 94.0 0.085 2.9E-06 53.9 7.2 35 361-396 23-58 (271)
218 2r6j_A Eugenol synthase 1; phe 94.0 0.3 1E-05 50.1 11.4 91 365-499 12-106 (318)
219 1yqg_A Pyrroline-5-carboxylate 94.0 0.046 1.6E-06 55.1 5.1 31 366-396 2-32 (263)
220 2c07_A 3-oxoacyl-(acyl-carrier 94.0 0.13 4.5E-06 52.5 8.6 36 360-396 40-76 (285)
221 2iz1_A 6-phosphogluconate dehy 94.0 0.17 6E-06 56.2 10.2 32 364-396 5-36 (474)
222 2b4q_A Rhamnolipids biosynthes 94.0 0.14 5E-06 52.2 8.8 34 362-396 27-61 (276)
223 3hwr_A 2-dehydropantoate 2-red 93.9 0.12 4.2E-06 54.1 8.4 31 363-394 18-48 (318)
224 2cfc_A 2-(R)-hydroxypropyl-COM 93.9 0.21 7.2E-06 49.3 9.7 32 364-396 2-34 (250)
225 1zem_A Xylitol dehydrogenase; 93.9 0.23 7.8E-06 50.0 10.1 35 361-396 4-39 (262)
226 4iiu_A 3-oxoacyl-[acyl-carrier 93.9 0.15 5.2E-06 51.4 8.8 34 360-393 22-56 (267)
227 3d0o_A L-LDH 1, L-lactate dehy 93.9 0.16 5.3E-06 53.7 9.1 37 361-397 3-40 (317)
228 3ak4_A NADH-dependent quinucli 93.9 0.12 4.1E-06 51.9 8.0 36 361-397 9-45 (263)
229 1vl8_A Gluconate 5-dehydrogena 93.9 0.25 8.7E-06 50.1 10.4 36 360-396 17-53 (267)
230 4da9_A Short-chain dehydrogena 93.9 0.26 9.1E-06 50.4 10.6 91 361-484 26-117 (280)
231 3n74_A 3-ketoacyl-(acyl-carrie 93.9 0.21 7.3E-06 49.9 9.6 35 361-396 6-41 (261)
232 1a5z_A L-lactate dehydrogenase 93.9 0.14 4.8E-06 54.0 8.6 32 366-397 2-34 (319)
233 4dry_A 3-oxoacyl-[acyl-carrier 93.8 0.13 4.5E-06 52.8 8.2 36 360-396 29-65 (281)
234 4dll_A 2-hydroxy-3-oxopropiona 93.8 0.052 1.8E-06 57.1 5.3 36 361-397 28-63 (320)
235 2pgd_A 6-phosphogluconate dehy 93.8 0.26 8.7E-06 55.0 11.1 32 365-397 3-34 (482)
236 3c24_A Putative oxidoreductase 93.8 0.11 3.9E-06 53.2 7.6 86 365-505 12-100 (286)
237 1pgj_A 6PGDH, 6-PGDH, 6-phosph 93.8 0.25 8.5E-06 55.1 10.9 31 366-397 3-33 (478)
238 2jl1_A Triphenylmethane reduct 93.8 0.19 6.7E-06 50.5 9.2 94 365-505 1-105 (287)
239 3ius_A Uncharacterized conserv 93.7 0.43 1.5E-05 48.0 11.7 32 364-396 5-36 (286)
240 1evy_A Glycerol-3-phosphate de 93.7 0.14 4.9E-06 54.3 8.5 30 366-396 17-46 (366)
241 2q2v_A Beta-D-hydroxybutyrate 93.7 0.23 7.9E-06 49.7 9.5 34 362-396 2-36 (255)
242 1zk4_A R-specific alcohol dehy 93.7 0.13 4.5E-06 50.9 7.6 35 361-396 3-38 (251)
243 4hy3_A Phosphoglycerate oxidor 93.7 0.071 2.4E-06 57.8 6.1 36 360-396 172-207 (365)
244 3sxp_A ADP-L-glycero-D-mannohe 93.6 0.6 2.1E-05 48.8 13.1 36 361-397 7-45 (362)
245 2qq5_A DHRS1, dehydrogenase/re 93.6 0.2 6.8E-06 50.4 9.0 35 361-396 2-37 (260)
246 3tpc_A Short chain alcohol deh 93.6 0.16 5.4E-06 51.0 8.3 36 361-397 4-40 (257)
247 1nff_A Putative oxidoreductase 93.6 0.28 9.5E-06 49.5 10.0 35 361-396 4-39 (260)
248 3m2p_A UDP-N-acetylglucosamine 93.6 0.33 1.1E-05 49.6 10.8 33 364-397 2-35 (311)
249 4dqv_A Probable peptide synthe 93.6 0.56 1.9E-05 51.7 13.3 37 361-397 70-109 (478)
250 1yj8_A Glycerol-3-phosphate de 93.6 0.1 3.4E-06 55.9 7.0 108 365-508 22-143 (375)
251 4dqx_A Probable oxidoreductase 93.6 0.27 9.2E-06 50.3 10.0 35 361-396 24-59 (277)
252 3d3w_A L-xylulose reductase; u 93.6 0.18 6.2E-06 49.7 8.4 34 362-396 5-39 (244)
253 1hxh_A 3BETA/17BETA-hydroxyste 93.6 0.13 4.5E-06 51.6 7.5 35 361-396 3-38 (253)
254 2dpo_A L-gulonate 3-dehydrogen 93.6 0.074 2.5E-06 56.4 5.9 34 363-397 5-38 (319)
255 4e21_A 6-phosphogluconate dehy 93.5 0.22 7.5E-06 53.6 9.6 119 362-506 20-140 (358)
256 3kvo_A Hydroxysteroid dehydrog 93.5 0.39 1.3E-05 51.1 11.5 38 360-398 41-79 (346)
257 1sny_A Sniffer CG10964-PA; alp 93.5 0.19 6.4E-06 50.3 8.5 39 359-397 16-57 (267)
258 3p2y_A Alanine dehydrogenase/p 93.5 0.078 2.7E-06 57.8 6.0 37 360-397 180-216 (381)
259 3ksu_A 3-oxoacyl-acyl carrier 93.5 0.19 6.5E-06 50.9 8.6 85 361-483 8-100 (262)
260 3jtm_A Formate dehydrogenase, 93.5 0.072 2.5E-06 57.3 5.7 35 361-396 161-195 (351)
261 3ctm_A Carbonyl reductase; alc 93.5 0.23 7.8E-06 50.2 9.1 35 361-396 31-66 (279)
262 3nep_X Malate dehydrogenase; h 93.5 0.2 7E-06 53.0 9.1 32 366-397 2-34 (314)
263 2dvm_A Malic enzyme, 439AA lon 93.5 0.053 1.8E-06 60.2 4.7 35 361-395 183-219 (439)
264 3v2g_A 3-oxoacyl-[acyl-carrier 93.4 0.29 1E-05 49.8 10.0 83 361-483 28-118 (271)
265 1guz_A Malate dehydrogenase; o 93.4 0.26 8.8E-06 51.7 9.8 32 366-397 2-34 (310)
266 4aj2_A L-lactate dehydrogenase 93.4 0.079 2.7E-06 56.6 5.9 37 360-396 15-52 (331)
267 1ur5_A Malate dehydrogenase; o 93.4 0.28 9.7E-06 51.4 10.0 33 365-397 3-35 (309)
268 1geg_A Acetoin reductase; SDR 93.4 0.37 1.3E-05 48.2 10.5 32 364-396 2-34 (256)
269 2wsb_A Galactitol dehydrogenas 93.4 0.27 9.2E-06 48.7 9.4 34 362-396 9-43 (254)
270 3kkj_A Amine oxidase, flavin-c 93.4 0.074 2.5E-06 50.1 5.0 32 365-397 3-34 (336)
271 2x0j_A Malate dehydrogenase; o 93.3 0.31 1.1E-05 51.2 10.1 31 366-396 2-33 (294)
272 3cxt_A Dehydrogenase with diff 93.3 0.28 9.7E-06 50.6 9.7 35 361-396 31-66 (291)
273 2bka_A CC3, TAT-interacting pr 93.3 0.22 7.7E-06 48.8 8.6 36 362-397 16-53 (242)
274 1x1t_A D(-)-3-hydroxybutyrate 93.3 0.23 7.8E-06 49.9 8.8 34 362-396 2-36 (260)
275 4eso_A Putative oxidoreductase 93.3 0.18 6.1E-06 50.8 8.1 35 361-396 5-40 (255)
276 3grp_A 3-oxoacyl-(acyl carrier 93.3 0.24 8.4E-06 50.3 9.1 36 360-396 23-59 (266)
277 3v2h_A D-beta-hydroxybutyrate 93.3 0.43 1.5E-05 48.8 11.0 35 361-396 22-57 (281)
278 2uyy_A N-PAC protein; long-cha 93.3 0.079 2.7E-06 55.1 5.5 32 365-397 31-62 (316)
279 4dyv_A Short-chain dehydrogena 93.3 0.2 6.9E-06 51.2 8.4 36 360-396 24-60 (272)
280 1ez4_A Lactate dehydrogenase; 93.3 0.24 8.3E-06 52.4 9.2 33 364-396 5-38 (318)
281 3e03_A Short chain dehydrogena 93.2 0.61 2.1E-05 47.3 11.9 36 362-398 4-40 (274)
282 1rkx_A CDP-glucose-4,6-dehydra 93.2 0.11 3.8E-06 54.2 6.6 37 360-397 5-42 (357)
283 3ppi_A 3-hydroxyacyl-COA dehyd 93.2 0.21 7.3E-06 50.7 8.5 36 360-396 26-62 (281)
284 3oig_A Enoyl-[acyl-carrier-pro 93.2 0.31 1.1E-05 48.9 9.6 35 361-396 4-41 (266)
285 1dih_A Dihydrodipicolinate red 93.2 0.16 5.6E-06 52.6 7.7 40 469-509 67-106 (273)
286 3gvc_A Oxidoreductase, probabl 93.2 0.21 7.2E-06 51.2 8.4 36 360-396 25-61 (277)
287 1ek6_A UDP-galactose 4-epimera 93.2 0.34 1.2E-05 50.2 10.1 33 364-397 2-35 (348)
288 2x6t_A ADP-L-glycero-D-manno-h 93.2 0.48 1.6E-05 49.5 11.3 38 360-397 42-80 (357)
289 3m6i_A L-arabinitol 4-dehydrog 93.2 0.42 1.4E-05 50.6 11.0 34 363-396 179-212 (363)
290 1txg_A Glycerol-3-phosphate de 93.1 0.15 5.2E-06 52.9 7.4 30 366-396 2-31 (335)
291 1xkq_A Short-chain reductase f 93.1 0.29 1E-05 49.7 9.3 35 361-396 3-38 (280)
292 4ezb_A Uncharacterized conserv 93.1 0.43 1.5E-05 50.1 10.8 34 364-397 24-57 (317)
293 3ldh_A Lactate dehydrogenase; 93.1 0.24 8.1E-06 53.0 8.8 34 363-396 20-54 (330)
294 4fn4_A Short chain dehydrogena 93.1 0.34 1.2E-05 49.7 9.7 88 361-482 4-92 (254)
295 1yde_A Retinal dehydrogenase/r 93.1 0.31 1.1E-05 49.5 9.4 35 361-396 6-41 (270)
296 2wm3_A NMRA-like family domain 93.1 1 3.5E-05 45.7 13.3 77 364-484 5-82 (299)
297 1gee_A Glucose 1-dehydrogenase 93.1 0.46 1.6E-05 47.3 10.5 35 361-396 4-39 (261)
298 3osu_A 3-oxoacyl-[acyl-carrier 93.0 0.29 1E-05 48.8 9.1 82 362-483 2-91 (246)
299 1cyd_A Carbonyl reductase; sho 93.0 0.37 1.3E-05 47.3 9.8 34 362-396 5-39 (244)
300 2x4g_A Nucleoside-diphosphate- 93.0 0.6 2.1E-05 48.0 11.7 32 365-397 14-46 (342)
301 2p91_A Enoyl-[acyl-carrier-pro 93.0 0.28 9.5E-06 50.0 9.0 35 361-396 18-55 (285)
302 1qsg_A Enoyl-[acyl-carrier-pro 93.0 0.23 7.7E-06 50.1 8.2 35 362-397 7-44 (265)
303 3pdu_A 3-hydroxyisobutyrate de 93.0 0.2 6.7E-06 51.5 7.8 32 365-397 2-33 (287)
304 2x9g_A PTR1, pteridine reducta 93.0 0.42 1.4E-05 48.8 10.3 36 360-396 19-55 (288)
305 1h5q_A NADP-dependent mannitol 93.0 0.22 7.7E-06 49.5 8.1 34 362-396 12-46 (265)
306 3l6e_A Oxidoreductase, short-c 92.9 0.42 1.5E-05 47.4 10.0 33 363-396 2-35 (235)
307 2a4k_A 3-oxoacyl-[acyl carrier 92.9 0.16 5.6E-06 51.4 7.1 35 361-396 3-38 (263)
308 3e48_A Putative nucleoside-dip 92.9 0.77 2.6E-05 46.3 12.1 94 366-505 2-104 (289)
309 3ijr_A Oxidoreductase, short c 92.9 0.57 1.9E-05 48.1 11.2 36 360-396 43-79 (291)
310 1edo_A Beta-keto acyl carrier 92.9 0.4 1.4E-05 47.1 9.7 29 364-393 1-30 (244)
311 3oec_A Carveol dehydrogenase ( 92.9 0.47 1.6E-05 49.5 10.7 95 360-483 42-144 (317)
312 2d1y_A Hypothetical protein TT 92.8 0.46 1.6E-05 47.6 10.2 36 361-397 3-39 (256)
313 2wyu_A Enoyl-[acyl carrier pro 92.8 0.32 1.1E-05 49.0 9.1 35 361-396 5-42 (261)
314 2zqz_A L-LDH, L-lactate dehydr 92.8 0.29 9.8E-06 52.0 9.1 34 363-396 8-42 (326)
315 1mld_A Malate dehydrogenase; o 92.8 0.41 1.4E-05 50.4 10.1 33 366-398 2-36 (314)
316 3a28_C L-2.3-butanediol dehydr 92.8 0.48 1.6E-05 47.4 10.3 32 364-396 2-34 (258)
317 1yo6_A Putative carbonyl reduc 92.8 0.17 6E-06 49.5 6.9 35 363-397 2-38 (250)
318 3ew7_A LMO0794 protein; Q8Y8U8 92.8 0.29 9.8E-06 47.0 8.3 30 366-396 2-32 (221)
319 4iin_A 3-ketoacyl-acyl carrier 92.8 0.27 9.3E-06 49.7 8.5 35 361-396 26-61 (271)
320 3qha_A Putative oxidoreductase 92.8 0.21 7.3E-06 51.7 7.9 34 364-398 15-48 (296)
321 3edm_A Short chain dehydrogena 92.8 0.37 1.3E-05 48.6 9.4 33 361-394 5-38 (259)
322 2pv7_A T-protein [includes: ch 92.8 0.25 8.4E-06 51.3 8.3 33 364-397 21-54 (298)
323 3k31_A Enoyl-(acyl-carrier-pro 92.8 0.46 1.6E-05 49.0 10.3 35 361-396 27-64 (296)
324 1orr_A CDP-tyvelose-2-epimeras 92.8 0.84 2.9E-05 46.9 12.4 31 365-396 2-33 (347)
325 3op4_A 3-oxoacyl-[acyl-carrier 92.7 0.3 1E-05 48.9 8.7 35 361-396 6-41 (248)
326 3oid_A Enoyl-[acyl-carrier-pro 92.7 0.22 7.5E-06 50.3 7.7 60 363-446 3-63 (258)
327 3gg2_A Sugar dehydrogenase, UD 92.7 0.31 1E-05 54.0 9.5 33 365-398 3-35 (450)
328 1xq6_A Unknown protein; struct 92.7 0.17 6E-06 49.4 6.8 34 363-396 3-38 (253)
329 1xhl_A Short-chain dehydrogena 92.7 0.34 1.2E-05 50.0 9.3 34 362-396 24-58 (297)
330 2q1w_A Putative nucleotide sug 92.7 0.85 2.9E-05 47.2 12.4 37 360-397 17-54 (333)
331 2p4q_A 6-phosphogluconate dehy 92.7 0.33 1.1E-05 54.5 9.8 34 364-398 10-43 (497)
332 3b1f_A Putative prephenate deh 92.7 0.28 9.6E-06 50.1 8.6 33 364-396 6-39 (290)
333 1edz_A 5,10-methylenetetrahydr 92.6 0.14 4.9E-06 54.5 6.4 39 361-400 174-213 (320)
334 3nrc_A Enoyl-[acyl-carrier-pro 92.6 0.23 8E-06 50.5 7.8 38 359-397 21-61 (280)
335 3s55_A Putative short-chain de 92.6 0.65 2.2E-05 47.1 11.1 37 360-397 6-43 (281)
336 2nac_A NAD-dependent formate d 92.6 0.13 4.6E-06 56.1 6.3 35 361-396 188-222 (393)
337 3q2i_A Dehydrogenase; rossmann 92.6 0.33 1.1E-05 51.3 9.2 88 364-504 13-104 (354)
338 3uf0_A Short-chain dehydrogena 92.6 0.75 2.6E-05 46.8 11.5 35 361-396 28-63 (273)
339 4dmm_A 3-oxoacyl-[acyl-carrier 92.5 0.37 1.3E-05 48.9 9.2 35 361-396 25-60 (269)
340 3rft_A Uronate dehydrogenase; 92.5 0.2 6.8E-06 50.5 7.0 34 363-397 2-36 (267)
341 1gy8_A UDP-galactose 4-epimera 92.5 1.2 4E-05 47.0 13.3 32 365-397 3-36 (397)
342 1yb4_A Tartronic semialdehyde 92.5 0.086 2.9E-06 53.9 4.4 30 365-395 4-33 (295)
343 4f6c_A AUSA reductase domain p 92.5 0.23 8E-06 53.5 8.0 35 361-396 66-101 (427)
344 2q1s_A Putative nucleotide sug 92.5 0.38 1.3E-05 50.9 9.4 38 360-397 28-66 (377)
345 2zcu_A Uncharacterized oxidore 92.4 0.45 1.5E-05 47.7 9.5 30 366-396 1-33 (286)
346 3grk_A Enoyl-(acyl-carrier-pro 92.4 0.52 1.8E-05 48.6 10.2 36 360-396 27-65 (293)
347 2nwq_A Probable short-chain de 92.4 0.33 1.1E-05 49.5 8.6 35 360-396 18-53 (272)
348 1e7w_A Pteridine reductase; di 92.4 0.42 1.4E-05 49.1 9.4 34 361-395 6-40 (291)
349 3r3s_A Oxidoreductase; structu 92.4 0.36 1.2E-05 49.7 8.9 36 360-396 45-81 (294)
350 2c5a_A GDP-mannose-3', 5'-epim 92.3 0.93 3.2E-05 48.0 12.2 34 363-397 28-62 (379)
351 1mxh_A Pteridine reductase 2; 92.3 0.49 1.7E-05 47.7 9.6 36 360-396 7-43 (276)
352 3euw_A MYO-inositol dehydrogen 92.3 0.37 1.3E-05 50.7 9.0 87 365-504 5-94 (344)
353 3t7c_A Carveol dehydrogenase; 92.2 0.81 2.8E-05 47.1 11.4 36 361-397 25-61 (299)
354 3ek2_A Enoyl-(acyl-carrier-pro 92.2 0.35 1.2E-05 48.3 8.4 37 359-396 9-48 (271)
355 1ja9_A 4HNR, 1,3,6,8-tetrahydr 92.2 0.3 1E-05 48.9 7.8 35 361-396 18-53 (274)
356 3uuw_A Putative oxidoreductase 92.2 0.26 8.9E-06 51.0 7.6 90 362-504 4-95 (308)
357 1y6j_A L-lactate dehydrogenase 92.2 0.22 7.7E-06 52.5 7.2 34 364-397 7-41 (318)
358 4e3z_A Putative oxidoreductase 92.2 0.51 1.7E-05 47.6 9.6 28 363-390 25-53 (272)
359 3d4o_A Dipicolinate synthase s 92.2 0.14 4.9E-06 53.1 5.5 35 361-396 152-186 (293)
360 4gwg_A 6-phosphogluconate dehy 92.1 0.48 1.6E-05 53.1 10.1 122 364-506 4-128 (484)
361 3u5t_A 3-oxoacyl-[acyl-carrier 92.0 0.5 1.7E-05 48.0 9.4 32 362-394 25-57 (267)
362 3icc_A Putative 3-oxoacyl-(acy 92.0 0.32 1.1E-05 48.3 7.8 33 362-395 5-38 (255)
363 3rc1_A Sugar 3-ketoreductase; 92.0 0.46 1.6E-05 50.4 9.4 90 362-504 25-118 (350)
364 3fef_A Putative glucosidase LP 91.9 0.2 6.8E-06 55.8 6.6 94 363-500 4-103 (450)
365 3mz0_A Inositol 2-dehydrogenas 91.9 0.46 1.6E-05 50.0 9.2 89 365-504 3-95 (344)
366 1lnq_A MTHK channels, potassiu 91.9 0.35 1.2E-05 50.7 8.3 88 364-500 115-203 (336)
367 3ip1_A Alcohol dehydrogenase, 91.9 0.42 1.5E-05 51.5 9.1 34 363-396 213-246 (404)
368 2pd4_A Enoyl-[acyl-carrier-pro 91.8 0.4 1.4E-05 48.6 8.4 35 362-397 4-41 (275)
369 3m1a_A Putative dehydrogenase; 91.7 0.4 1.4E-05 48.5 8.3 35 362-397 3-38 (281)
370 3u9l_A 3-oxoacyl-[acyl-carrier 91.7 0.6 2E-05 49.0 9.8 86 362-483 3-96 (324)
371 2xxj_A L-LDH, L-lactate dehydr 91.7 0.32 1.1E-05 51.2 7.7 33 365-397 1-34 (310)
372 4hkt_A Inositol 2-dehydrogenas 91.7 0.65 2.2E-05 48.5 10.0 32 365-396 4-36 (331)
373 2z5l_A Tylkr1, tylactone synth 91.7 0.75 2.6E-05 51.7 11.1 84 363-483 258-344 (511)
374 1z45_A GAL10 bifunctional prot 91.6 0.83 2.8E-05 52.7 11.7 35 361-396 8-43 (699)
375 2qhx_A Pteridine reductase 1; 91.6 0.55 1.9E-05 49.3 9.4 35 360-395 42-77 (328)
376 3ec7_A Putative dehydrogenase; 91.6 0.71 2.4E-05 49.1 10.3 92 362-504 21-116 (357)
377 2dc1_A L-aspartate dehydrogena 91.6 0.81 2.8E-05 45.6 10.2 32 366-397 2-33 (236)
378 3fr7_A Putative ketol-acid red 91.5 0.53 1.8E-05 53.0 9.5 28 359-386 48-76 (525)
379 1uls_A Putative 3-oxoacyl-acyl 91.5 0.48 1.6E-05 47.2 8.5 34 362-396 3-37 (245)
380 3gk3_A Acetoacetyl-COA reducta 91.4 0.52 1.8E-05 47.5 8.7 34 361-395 22-56 (269)
381 3k6j_A Protein F01G10.3, confi 91.4 0.063 2.1E-06 59.9 2.0 33 365-398 55-87 (460)
382 4hb9_A Similarities with proba 91.4 0.18 6.1E-06 53.0 5.4 34 364-398 1-34 (412)
383 3kb6_A D-lactate dehydrogenase 91.4 0.094 3.2E-06 56.0 3.2 92 360-508 137-232 (334)
384 3c7a_A Octopine dehydrogenase; 91.3 0.69 2.3E-05 49.8 10.0 30 365-395 3-33 (404)
385 3f9i_A 3-oxoacyl-[acyl-carrier 91.3 0.52 1.8E-05 46.7 8.4 36 360-396 10-46 (249)
386 4fgw_A Glycerol-3-phosphate de 91.3 0.48 1.6E-05 51.8 8.7 112 365-510 35-155 (391)
387 3ehe_A UDP-glucose 4-epimerase 91.3 0.36 1.2E-05 49.3 7.4 29 365-395 2-31 (313)
388 1pl8_A Human sorbitol dehydrog 91.2 0.63 2.1E-05 49.2 9.4 34 363-396 171-204 (356)
389 1smk_A Malate dehydrogenase, g 91.2 0.84 2.9E-05 48.3 10.4 33 365-397 9-43 (326)
390 2fr1_A Erythromycin synthase, 91.2 0.85 2.9E-05 50.8 10.9 84 363-483 225-315 (486)
391 4ej6_A Putative zinc-binding d 91.2 0.3 1E-05 52.1 7.0 34 363-396 182-215 (370)
392 4f3y_A DHPR, dihydrodipicolina 91.2 0.61 2.1E-05 48.4 9.1 42 467-509 66-107 (272)
393 4a2c_A Galactitol-1-phosphate 91.2 0.52 1.8E-05 49.2 8.7 34 363-396 160-193 (346)
394 2glx_A 1,5-anhydro-D-fructose 91.2 0.58 2E-05 48.7 9.0 31 366-396 2-33 (332)
395 3db2_A Putative NADPH-dependen 91.2 0.35 1.2E-05 51.1 7.4 33 364-396 5-38 (354)
396 3is3_A 17BETA-hydroxysteroid d 91.0 0.5 1.7E-05 47.8 8.1 36 360-396 14-50 (270)
397 4fgs_A Probable dehydrogenase 90.9 0.39 1.3E-05 49.8 7.3 36 360-396 25-61 (273)
398 2hun_A 336AA long hypothetical 90.9 0.67 2.3E-05 47.6 9.1 35 363-397 2-38 (336)
399 4g81_D Putative hexonate dehyd 90.8 0.35 1.2E-05 49.6 6.7 35 361-396 6-41 (255)
400 1xgk_A Nitrogen metabolite rep 90.8 2 6.9E-05 45.3 12.9 98 363-505 4-111 (352)
401 2uvd_A 3-oxoacyl-(acyl-carrier 90.8 0.74 2.5E-05 45.7 9.0 34 362-396 2-36 (246)
402 2y0c_A BCEC, UDP-glucose dehyd 90.7 0.78 2.7E-05 51.2 10.0 35 363-398 7-41 (478)
403 1f0y_A HCDH, L-3-hydroxyacyl-C 90.7 0.22 7.7E-06 51.5 5.2 32 365-397 16-47 (302)
404 3nv9_A Malic enzyme; rossmann 90.7 0.18 6.3E-06 56.0 4.7 40 360-399 215-256 (487)
405 2ehd_A Oxidoreductase, oxidore 90.6 0.52 1.8E-05 46.1 7.6 33 363-396 4-37 (234)
406 1r6d_A TDP-glucose-4,6-dehydra 90.6 2.7 9.1E-05 43.2 13.3 32 366-397 2-39 (337)
407 3sc6_A DTDP-4-dehydrorhamnose 90.5 0.45 1.5E-05 47.9 7.2 30 366-396 7-37 (287)
408 3gdg_A Probable NADP-dependent 90.5 0.29 9.8E-06 49.1 5.7 36 360-396 16-54 (267)
409 3ijp_A DHPR, dihydrodipicolina 90.5 0.65 2.2E-05 48.7 8.6 43 466-509 80-122 (288)
410 3kzv_A Uncharacterized oxidore 90.5 0.93 3.2E-05 45.4 9.5 33 364-396 2-36 (254)
411 2ywl_A Thioredoxin reductase r 90.5 0.26 9E-06 46.2 5.1 32 366-398 3-34 (180)
412 3gem_A Short chain dehydrogena 90.5 0.86 3E-05 46.0 9.2 36 361-397 24-60 (260)
413 1oc2_A DTDP-glucose 4,6-dehydr 90.5 2.4 8.2E-05 43.6 12.8 33 365-397 5-39 (348)
414 1vl0_A DTDP-4-dehydrorhamnose 90.4 0.7 2.4E-05 46.5 8.6 34 363-397 11-45 (292)
415 2hrz_A AGR_C_4963P, nucleoside 90.4 0.81 2.8E-05 47.2 9.2 36 362-397 12-54 (342)
416 3guy_A Short-chain dehydrogena 90.4 0.53 1.8E-05 46.2 7.4 31 365-396 2-33 (230)
417 3dje_A Fructosyl amine: oxygen 90.4 0.25 8.6E-06 53.1 5.5 36 364-399 6-41 (438)
418 3vrd_B FCCB subunit, flavocyto 90.3 0.25 8.7E-06 52.5 5.4 36 363-398 1-37 (401)
419 2c29_D Dihydroflavonol 4-reduc 90.3 0.4 1.4E-05 49.5 6.8 33 363-396 4-37 (337)
420 3zv4_A CIS-2,3-dihydrobiphenyl 90.3 0.58 2E-05 47.7 7.8 34 362-396 3-37 (281)
421 3i4f_A 3-oxoacyl-[acyl-carrier 90.3 0.44 1.5E-05 47.7 6.8 33 363-396 6-39 (264)
422 2ixa_A Alpha-N-acetylgalactosa 90.1 0.95 3.2E-05 49.6 9.9 99 362-504 18-120 (444)
423 3ezy_A Dehydrogenase; structur 90.1 0.48 1.6E-05 49.9 7.2 88 365-504 3-93 (344)
424 3e9m_A Oxidoreductase, GFO/IDH 90.0 0.55 1.9E-05 49.2 7.6 33 364-396 5-38 (330)
425 1c0p_A D-amino acid oxidase; a 90.0 0.32 1.1E-05 50.9 5.8 36 364-400 6-41 (363)
426 2ew8_A (S)-1-phenylethanol deh 89.9 1.6 5.5E-05 43.4 10.6 35 361-396 4-39 (249)
427 3ghy_A Ketopantoate reductase 89.9 0.22 7.6E-06 52.4 4.4 32 364-396 3-34 (335)
428 3dii_A Short-chain dehydrogena 89.9 0.57 1.9E-05 46.7 7.2 33 364-397 2-35 (247)
429 1ks9_A KPA reductase;, 2-dehyd 89.9 0.29 9.8E-06 49.5 5.1 32 366-398 2-33 (291)
430 4h7p_A Malate dehydrogenase; s 89.9 0.9 3.1E-05 48.7 9.2 84 360-484 20-110 (345)
431 2ho3_A Oxidoreductase, GFO/IDH 89.9 0.62 2.1E-05 48.5 7.8 31 366-396 3-34 (325)
432 2vt3_A REX, redox-sensing tran 89.8 0.97 3.3E-05 45.3 8.8 87 364-503 85-173 (215)
433 3un1_A Probable oxidoreductase 89.8 0.83 2.8E-05 46.1 8.5 39 360-399 24-63 (260)
434 2bll_A Protein YFBG; decarboxy 89.7 2.2 7.5E-05 43.7 11.8 32 365-397 1-34 (345)
435 3ond_A Adenosylhomocysteinase; 89.7 0.28 9.7E-06 55.0 5.3 35 361-396 262-296 (488)
436 1vkn_A N-acetyl-gamma-glutamyl 89.7 0.64 2.2E-05 50.1 7.8 97 365-510 14-113 (351)
437 1rpn_A GDP-mannose 4,6-dehydra 89.7 0.5 1.7E-05 48.6 6.8 36 361-397 11-47 (335)
438 1e3j_A NADP(H)-dependent ketos 89.6 1.2 4E-05 46.9 9.8 33 363-396 168-200 (352)
439 1b8p_A Protein (malate dehydro 89.6 0.72 2.5E-05 48.7 8.1 32 365-396 6-44 (329)
440 2ph3_A 3-oxoacyl-[acyl carrier 89.5 0.92 3.2E-05 44.4 8.3 29 365-394 2-31 (245)
441 2yut_A Putative short-chain ox 89.5 0.44 1.5E-05 45.5 5.8 29 365-396 1-30 (207)
442 1obb_A Maltase, alpha-glucosid 89.2 2.2 7.5E-05 47.8 12.0 34 364-397 3-41 (480)
443 3hn2_A 2-dehydropantoate 2-red 89.2 0.28 9.4E-06 51.2 4.5 32 365-397 3-34 (312)
444 1y56_B Sarcosine oxidase; dehy 89.1 0.36 1.2E-05 50.7 5.3 36 364-400 5-40 (382)
445 1g0o_A Trihydroxynaphthalene r 89.1 1 3.5E-05 45.7 8.6 35 361-396 26-61 (283)
446 1leh_A Leucine dehydrogenase; 89.1 0.35 1.2E-05 52.3 5.3 38 358-396 167-204 (364)
447 3cea_A MYO-inositol 2-dehydrog 89.0 0.56 1.9E-05 49.1 6.6 33 364-396 8-42 (346)
448 3ezl_A Acetoacetyl-COA reducta 88.9 0.75 2.6E-05 45.7 7.3 36 359-395 8-44 (256)
449 3g17_A Similar to 2-dehydropan 88.9 0.28 9.6E-06 50.7 4.2 32 365-397 3-34 (294)
450 3c96_A Flavin-containing monoo 88.9 0.42 1.4E-05 51.2 5.7 35 364-398 4-38 (410)
451 3qp9_A Type I polyketide synth 88.8 1.1 3.8E-05 50.4 9.4 93 364-483 251-351 (525)
452 3st7_A Capsular polysaccharide 88.8 1.1 3.8E-05 47.0 8.9 32 366-397 2-34 (369)
453 2ejw_A HDH, homoserine dehydro 88.8 1.2 4E-05 47.6 9.0 32 474-505 66-97 (332)
454 1n7h_A GDP-D-mannose-4,6-dehyd 88.7 0.42 1.4E-05 50.3 5.6 32 365-397 29-61 (381)
455 3rp8_A Flavoprotein monooxygen 88.7 0.42 1.4E-05 50.9 5.6 38 360-398 19-56 (407)
456 3asu_A Short-chain dehydrogena 88.7 1 3.5E-05 45.0 8.1 31 365-396 1-32 (248)
457 1ryi_A Glycine oxidase; flavop 88.7 0.36 1.2E-05 50.5 5.0 36 364-400 17-52 (382)
458 4gx0_A TRKA domain protein; me 88.7 1.9 6.4E-05 48.6 11.1 86 365-501 349-435 (565)
459 3orf_A Dihydropteridine reduct 88.7 2 6.9E-05 42.7 10.3 76 361-444 19-95 (251)
460 3hg7_A D-isomer specific 2-hyd 88.6 0.38 1.3E-05 51.2 5.1 36 360-396 136-171 (324)
461 3ko8_A NAD-dependent epimerase 88.6 1.1 3.9E-05 45.3 8.5 31 365-396 1-32 (312)
462 2rcy_A Pyrroline carboxylate r 88.6 0.35 1.2E-05 48.5 4.6 34 364-397 4-40 (262)
463 2ekl_A D-3-phosphoglycerate de 88.6 0.39 1.3E-05 50.6 5.1 36 360-396 138-173 (313)
464 1yvv_A Amine oxidase, flavin-c 88.6 0.38 1.3E-05 49.3 5.0 33 365-398 3-35 (336)
465 1s6y_A 6-phospho-beta-glucosid 88.5 1.1 3.9E-05 49.6 9.0 34 364-397 7-45 (450)
466 3ay3_A NAD-dependent epimerase 88.5 1.1 3.8E-05 44.7 8.2 32 365-397 3-35 (267)
467 2aqj_A Tryptophan halogenase, 88.4 0.47 1.6E-05 53.1 5.9 35 364-399 5-42 (538)
468 4ea9_A Perosamine N-acetyltran 88.3 2.6 9E-05 41.3 10.7 87 363-502 11-98 (220)
469 1n2s_A DTDP-4-, DTDP-glucose o 88.3 0.75 2.6E-05 46.4 6.9 31 366-398 2-33 (299)
470 3lk7_A UDP-N-acetylmuramoylala 88.3 0.71 2.4E-05 50.8 7.2 37 361-398 6-42 (451)
471 1x13_A NAD(P) transhydrogenase 88.3 0.42 1.4E-05 52.2 5.2 36 361-397 169-204 (401)
472 2o7s_A DHQ-SDH PR, bifunctiona 88.3 0.32 1.1E-05 54.8 4.4 35 361-396 361-395 (523)
473 3jv7_A ADH-A; dehydrogenase, n 88.2 1.3 4.4E-05 46.4 8.8 34 363-396 171-204 (345)
474 3cgv_A Geranylgeranyl reductas 88.2 0.33 1.1E-05 50.9 4.3 34 364-398 4-37 (397)
475 3hhp_A Malate dehydrogenase; M 88.2 1.3 4.5E-05 46.7 8.9 32 366-397 2-36 (312)
476 3o9z_A Lipopolysaccaride biosy 88.1 1.6 5.5E-05 45.5 9.5 34 365-398 4-38 (312)
477 1ydw_A AX110P-like protein; st 88.1 1 3.4E-05 47.7 8.0 33 364-396 6-39 (362)
478 3e18_A Oxidoreductase; dehydro 88.1 0.98 3.4E-05 48.0 8.0 34 363-396 4-38 (359)
479 2rh8_A Anthocyanidin reductase 88.1 1.1 3.9E-05 46.0 8.3 31 364-395 9-40 (338)
480 3ohs_X Trans-1,2-dihydrobenzen 88.1 1.1 3.7E-05 46.9 8.2 88 365-504 3-95 (334)
481 2gf3_A MSOX, monomeric sarcosi 88.0 0.43 1.5E-05 50.0 5.0 35 365-400 4-38 (389)
482 3mje_A AMPHB; rossmann fold, o 88.0 1.9 6.6E-05 48.3 10.6 34 364-397 239-273 (496)
483 2fwm_X 2,3-dihydro-2,3-dihydro 88.0 2.8 9.7E-05 41.6 10.8 76 362-444 5-82 (250)
484 3d1c_A Flavin-containing putat 88.0 0.37 1.2E-05 50.1 4.4 35 364-398 4-38 (369)
485 3r4v_A Putative uncharacterize 87.9 0.27 9.1E-06 51.7 3.2 106 365-505 3-116 (315)
486 2d0i_A Dehydrogenase; structur 87.9 0.38 1.3E-05 51.1 4.6 36 360-396 142-177 (333)
487 1db3_A GDP-mannose 4,6-dehydra 87.9 2.2 7.5E-05 44.4 10.4 32 365-397 2-34 (372)
488 2dbq_A Glyoxylate reductase; D 87.9 0.48 1.7E-05 50.3 5.3 36 360-396 146-181 (334)
489 5mdh_A Malate dehydrogenase; o 87.8 0.57 2E-05 49.9 5.9 77 365-483 4-88 (333)
490 3qy9_A DHPR, dihydrodipicolina 87.8 0.83 2.8E-05 46.6 6.8 31 365-396 4-35 (243)
491 3upl_A Oxidoreductase; rossman 87.8 1.7 5.9E-05 48.2 9.8 39 467-505 98-138 (446)
492 2e4g_A Tryptophan halogenase; 87.7 0.52 1.8E-05 53.0 5.8 35 364-399 25-62 (550)
493 2pk3_A GDP-6-deoxy-D-LYXO-4-he 87.6 1.6 5.4E-05 44.5 8.9 36 361-397 9-45 (321)
494 3dme_A Conserved exported prot 87.6 0.43 1.5E-05 49.2 4.6 36 364-400 4-40 (369)
495 2weu_A Tryptophan 5-halogenase 87.6 0.41 1.4E-05 52.9 4.7 34 365-399 3-39 (511)
496 1y7t_A Malate dehydrogenase; N 87.5 1.1 3.7E-05 47.0 7.8 32 365-396 5-43 (327)
497 2cul_A Glucose-inhibited divis 87.5 0.55 1.9E-05 46.5 5.2 33 364-397 3-35 (232)
498 1udb_A Epimerase, UDP-galactos 87.4 1 3.4E-05 46.4 7.3 30 366-396 2-32 (338)
499 2xdo_A TETX2 protein; tetracyc 87.4 0.47 1.6E-05 50.6 4.9 36 362-398 24-59 (398)
500 2uzz_A N-methyl-L-tryptophan o 87.3 0.39 1.3E-05 50.1 4.1 34 365-399 3-36 (372)
No 1
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=100.00 E-value=3.9e-146 Score=1242.26 Aligned_cols=602 Identities=41% Similarity=0.693 Sum_probs=534.6
Q ss_pred Cceeeec-CccCCChhhHHHHHhCCccccCCCCCCeeEEEEecCCC--CCCCcceEEEecCCCCCCCcccccccccccCC
Q 005071 13 SILQFAP-FQSSVDEGFWHRLSSLKLNKLGIDESPIPITGFYAPCS--HLQVSNHLSLLTESLPSDSDEQSSTAEISRGS 89 (715)
Q Consensus 13 ~~l~f~p-~~s~vd~~Fw~~L~~~KL~~~kLd~~~~~i~g~~~~~~--~~~~~~~l~Ld~~SF~~~~~~~~~~~~~~~~~ 89 (715)
.+|||+| |+|+||++|||+|+++|||+|||||+|++|+|+|++++ ..+.+++++|+++||+++.. .+
T Consensus 7 ~~l~f~p~f~s~vd~~Fw~~l~~~Kl~~~kLd~~~~~i~g~~~~~~~~~~~~~~~~~~~~~sf~~~~~----------~~ 76 (615)
T 4gsl_A 7 RVLSYAPAFKSFLDTSFFQELSRLKLDVLKLDSTCQPLTVNLDLHNIPKSADQVPLFLTNRSFEKHNN----------KR 76 (615)
T ss_dssp EECCCBCSCEEEECHHHHHHHHHTTCTTSCCSEEEEEEEEEECTTCCCTTCSBCEEEECGGGGSSSCC----------CC
T ss_pred CcceecCCcccccCchHHHHHHHhhcchhccCCCCeeEEEEEecCccccCCCCceEEEeHHHCCCccc----------CC
Confidence 4899999 99999999999999999999999999999999999986 77888999999999985421 23
Q ss_pred CceeeeeeeEEeccchHHhhccCHHHHHHHHHHHHHHhhhcCCcccCcccccchheeeeeccCCcEEEEEEEeeccCCCC
Q 005071 90 RNKCTVPGTLYNSNTLESFYTIDKQSLLKQEAKKIWEDIHSGKAVEDSTVLSRFLVISFADLKKWSFHYWFAFPALVLDP 169 (715)
Q Consensus 90 ~~~~~~~G~l~n~NTie~fk~~DK~~lL~~~g~~Iw~~i~~g~~~~~p~~l~~F~~ltfaDLKky~f~YwfafPa~~~~~ 169 (715)
.+.++++|+|+|+||||+||++||++||+++|++||++. ++||++|++|+|||||||||||||||||||||++++
T Consensus 77 ~~~~~~~G~l~n~Nt~e~fk~~dk~~ll~~~~~~i~~~~-----~~~~~~l~~F~~lsfaDLKky~f~ywfafP~~~~~~ 151 (615)
T 4gsl_A 77 TNEVPLQGSIFNFNVLDEFKNLDKQLFLHQRALECWEDG-----IKDINKCVSFVIISFADLKKYRFYYWLGVPCFQRPS 151 (615)
T ss_dssp TTCEEEEEEEEEESSHHHHHTSCHHHHHHHHHHHHHHHH-----TTCGGGCCCEEEEEEEETTTTEEEEEEEEEEEESST
T ss_pred CCceEEEEEEEEeccHHHHhhcCHHHHHHHHHHHHHHcc-----ccCHHHHhhHHHHHHHhhhcceEEEEEEEcccCCCc
Confidence 567899999999999999999999999999999999963 789999999999999999999999999999999999
Q ss_pred CeeeeccCcccccCChHHHHHHHHHHhhhhhcCCCCCccEEEEEeecCCcceeccccchhhhcCCCcceEEEEecCCCCC
Q 005071 170 PATVVDLKPASLWFSSQEAESVSAACSDWRNSSLTADVPYFLLTIAPNSRATIRHLKDWEACEGDGQKLLFGFYDPCHLQ 249 (715)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~F~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~f~Dps~~~ 249 (715)
+|++..... .++..+.+.+++|+.. ...+||++... ..+|++|+.....++.++ +|+|||+++
T Consensus 152 ~~~~~~~~~-------~~~~~~~~~~~~~~~~---~~~~~f~~~~~------~~~l~~~~~~~~~~~~~~-~f~Dps~~~ 214 (615)
T 4gsl_A 152 STVLHVRPE-------PSLKGLFSKCQKWFDV---NYSKWVCILDA------DDEIVNYDKCIIRKTKVL-AIRDTSTME 214 (615)
T ss_dssp TEEEEEEEC-------TTCCTHHHHHHHHHHH---CTTCSEEEECT------TSCEEECCHHHHHHHCEE-EEECCBCST
T ss_pred cceeccCCc-------hhhhHHHHHHHHHHhc---cCCcEEEEEec------ccchhhhhhccCCCceEE-EEECCCCCC
Confidence 998754211 1222334566788754 35679988763 245677765444456788 999999999
Q ss_pred CCCChhHHHHHHHHH-hhcCceeEEEEEEEcCCCcccCCCceEEEEEeecCCCCC-CCCCCcccccEEec-CCcccceEe
Q 005071 250 NHPGWPLRNFLALIL-TRWKLKSVLFLCYRENRGFTDLGLSLVGEALITVPQGWG-DHQCVPNTVGWELN-KGRKVPRCI 326 (715)
Q Consensus 250 ~~pgw~lRN~l~~~~-~~~~~~~~~v~~~R~~~~~~~~~~S~~~~~~~~~~~~~~-~~~~~~~~~gwe~~-~gkl~pr~~ 326 (715)
++|||||||||++++ +||++++++|+|||+..+ |++++++++...+.. .....|+++|||+| +||++||++
T Consensus 215 ~~pgw~lrN~l~~~~~~~~~~~~~~v~~~R~~~~------s~~~~~~~~~~~~~~~~~~~~~~~~GWE~n~~gkl~~~~~ 288 (615)
T 4gsl_A 215 NVPSALTKNFLSVLQYDVPDLIDFKLLIIRQNEG------SFALNATFASIDPQSSSSNPDMKVSGWERNVQGKLAPRVV 288 (615)
T ss_dssp TCCBTHHHHHHHHHHHHCTTCCEEEEEEECSSSC------CEEEEEEEEESSCCCC--CCCCEEEEECCCTTSCSCCEEE
T ss_pred CCCCHHHHHHHHHHHHhccCCceEEEEEEEcCCC------cEEEEEEcccccccccccccCccccccccCCCCCcceeEE
Confidence 999999999999998 899999999999998764 999999998643221 22357899999999 999999999
Q ss_pred cccCCCChhhhhhhhhhhhhhhhhhhcCCchhHHhhccCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeCCcccccCCCc
Q 005071 327 SLAKSMDPTRLAISAADLNLKLMRWRQLPSLNLDILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLR 406 (715)
Q Consensus 327 dl~~~~dp~~la~~a~dlnlry~R~rllp~~gq~kL~~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~D~Ve~sNl~R 406 (715)
||+..|||.+++++++++|+++||||++|++|+++|+++||+||||||+||+||++|+++|||+|+|||+|+|+.|||+|
T Consensus 289 ~l~~~~dp~~la~~~~~Lnlklm~wRllp~~g~ekL~~arVLIVGaGGLGs~vA~~La~aGVG~ItLvD~D~Ve~SNL~R 368 (615)
T 4gsl_A 289 DLSSLLDPLKIADQSVDLNLKLMKWRILPDLNLDIIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVR 368 (615)
T ss_dssp ECHHHHCHHHHHHHHHHHHHHHHHHHTCTTCCHHHHHTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCBCCTTGGGT
T ss_pred eccccCCHHHHHhhhhhhhhHHHHHhhcchhhHHHHhCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCCCcccCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcchhcCCCCcHHHHHHHHHHhhCCCcEEEEEecccCCCCCCCCCccccccccchhhHHHhhccCCEEEEeCCChH
Q 005071 407 QSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTRE 486 (715)
Q Consensus 407 Q~L~~~~Di~~~G~~KAeaaa~~L~~inP~v~v~~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~e 486 (715)
|+||+.+|+ |++||++|+++|+++||+++++++..+|||||||++++ ++.+.+.+++.++++++|+||+|+|+++
T Consensus 369 Q~L~~~~dI---G~~KAeaaa~~L~~iNP~V~v~~~~~~Ipm~gh~v~~e--~~~~l~~~~l~~ll~~~DlVvd~tDn~~ 443 (615)
T 4gsl_A 369 QALYNFEDC---GKPKAELAAASLKRIFPLMDATGVKLSIPMIGHKLVNE--EAQHKDFDRLRALIKEHDIIFLLVDSRE 443 (615)
T ss_dssp STTCCGGGT---TSBHHHHHHHHHHHHCTTCEEEEECCCCCCTTCCCSCH--HHHHHHHHHHHHHHHHCSEEEECCSSGG
T ss_pred ccCCChhhc---ChHHHHHHHHHHHhhCCCcEEEEeeccccccCccccch--hhhcCCHHHHHHHhhcCCEEEecCCCHH
Confidence 999999999 99999999999999999999999999999999999752 3455677888999999999999999999
Q ss_pred HHHHHHHHHHhcCCeEEEeeeCCceEEEEEcCCCCCcccccccchhccCccccccccCCCCCCCCCCcCceeecccCCCC
Q 005071 487 SRWLPTLLCANTNKITITAALGFDSFLVMRHGPGPFSITHDVKTEAVNGLSADMDNLGLNNRDGGQRLGCYFCNDVVAPT 566 (715)
Q Consensus 487 sR~li~~~~~~~~kp~I~aalG~~g~vv~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gCy~C~d~~aP~ 566 (715)
+|++++++|+++++|+|++++|++||++++||.... ..+.++|||+|+++++|.
T Consensus 444 tR~~ln~~c~~~~~PlI~aalG~~Gql~v~~g~~~~--------------------------~~~~~~~CY~Cl~~~~P~ 497 (615)
T 4gsl_A 444 SRWLPSLLSNIENKTVINAALGFDSYLVMRHGNRDE--------------------------QSSKQLGCYFCHDVVAPT 497 (615)
T ss_dssp GTHHHHHHHHHTTCEEEEEEECSSEEEEEECCC--------------------------------CCCCCTTTSCSSCTT
T ss_pred HHHHHHHHHHHcCCeEEEEEccceeEEEEeeccccc--------------------------CCCCCCCceeeCCCCCCc
Confidence 999999999999999999999999999999974210 112478999999999999
Q ss_pred CCCccccccccccccCcchHHHHHHHHHHHHHHHhcCCCCCCCCccccCCCCCCCCCCCCCceeEEEecCCCCeeeEEec
Q 005071 567 DSTANRTLDQQCTVTRPGLAPIASALAVELFVGVLHHPKGIYAGAEFANSIDSGSSEQPLGILPHQIRGSLSQFSQMTLV 646 (715)
Q Consensus 567 ~s~~drtLdq~CtV~~Pgv~~ias~~A~Ell~~ll~hp~g~~a~~~~~~~~~~~~~~~~Lg~~p~~irg~~~~f~~~~l~ 646 (715)
++..+||+|++|+|++|++|+||++||+|+|+.|++||.+... ++++|..||+|||+.++|+++++.
T Consensus 498 ~~~~~rtl~~~C~Vl~P~vgiigs~qA~EaLk~Ll~~g~~~~~-------------~~~~G~l~~~~dg~~~~f~~~~l~ 564 (615)
T 4gsl_A 498 DSLTDRTLDQMCTVTRPGVAMMASSLAVELMTSLLQTKYSGSE-------------TTVLGDIPHQIRGFLHNFSILKLE 564 (615)
T ss_dssp SCTTTTTTTCTTCCCCHHHHHHHHHHHHHHHHHHHSCCCTTSS-------------EETTEECCSEEEEETTTTEEEEEC
T ss_pred ccccccccccCcceecchHHHHHHHHHHHHHHHHhCCCCcccC-------------cCcCCCCcEEEeccCCcceEEecc
Confidence 9988999999999999999999999999999999998865321 246787899999999999999999
Q ss_pred CCCCCCCCCCChhHHHHHHHhCHHHHHHHhcCCchhhhccChhHHHHhhc
Q 005071 647 GHSSNSCTACCSTVVSEYRKRGMEFILQAINHPTYLEDLTGLTELKKSAN 696 (715)
Q Consensus 647 ~~~~~~C~aCs~~v~~~y~~~g~~f~~~~~~~~~~le~~~Gl~~~~~~~~ 696 (715)
++++++|++||..++++|+++||+||++|||+|+|||++|||+++|+++|
T Consensus 565 ~~~~p~C~~C~~~v~~~~~~~~~~f~~~~~~~~~~le~~~gl~~~~~~~~ 614 (615)
T 4gsl_A 565 TPAYEHCPACSPKVIEAFTDLGWEFVKKALEHPLYLEEISGLSVIKQEVE 614 (615)
T ss_dssp CCCCTTCTTTCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHSGGGTC----
T ss_pred CCCCCCCCCCCHHHHHHHHhcCHHHHHHHhcCccHhHHhcCHHHHHHHhc
Confidence 98999999999999999999999999999999999999999999998876
No 2
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=100.00 E-value=4.2e-133 Score=1135.39 Aligned_cols=585 Identities=41% Similarity=0.667 Sum_probs=506.6
Q ss_pred Cceeeec-CccCCChhhHHHHHhCCccccCCCCCCeeEEEEecC--CCCCCCcceEEEecCCCCCCCcccccccccccCC
Q 005071 13 SILQFAP-FQSSVDEGFWHRLSSLKLNKLGIDESPIPITGFYAP--CSHLQVSNHLSLLTESLPSDSDEQSSTAEISRGS 89 (715)
Q Consensus 13 ~~l~f~p-~~s~vd~~Fw~~L~~~KL~~~kLd~~~~~i~g~~~~--~~~~~~~~~l~Ld~~SF~~~~~~~~~~~~~~~~~ 89 (715)
.+|||+| |+|+||++|||+|+++|||+|||||+|++|+|+|++ ++..+.+++++|+++||+ +.. . .+
T Consensus 8 ~~l~f~p~~~s~~~~~Fw~~l~~~Kl~~~kLd~~~~~i~g~~~~~~~~~~~~~~~~~~~~~s~~-~~~--------~-~~ 77 (598)
T 3vh1_A 8 RVLSYAPAFKSFLDTSFFQELSRLKLDVLKLDSTCQPLTVNLDLHNIPKSADQVPLFLTNRSFE-KHN--------N-KR 77 (598)
T ss_dssp EECCCBCSEEEEECHHHHHHHHHHHHC------CEEEEEEEECSSCCCTTCSBEEEEECTTTTC-SCC--------C-CC
T ss_pred ccceecCccccccCchHHHHHHhhhcchhccCCCCceEEEEEccCCCCCCCCCeeEEEehHHhc-ccc--------c-CC
Confidence 4799999 999999999999999999999999999999999999 667889999999999996 211 0 12
Q ss_pred CceeeeeeeEEeccchHHhhccCHHHHHHHHHHHHHHhhhcCCcccCcccccchheeeeeccCCcEEEEEEEeeccCCCC
Q 005071 90 RNKCTVPGTLYNSNTLESFYTIDKQSLLKQEAKKIWEDIHSGKAVEDSTVLSRFLVISFADLKKWSFHYWFAFPALVLDP 169 (715)
Q Consensus 90 ~~~~~~~G~l~n~NTie~fk~~DK~~lL~~~g~~Iw~~i~~g~~~~~p~~l~~F~~ltfaDLKky~f~YwfafPa~~~~~ 169 (715)
.+.++++|+|+|+||+|+||++||++||+++|++||++ +++||++|++|+|||||||||||||||||||||++++
T Consensus 78 ~~~~~~~G~l~n~Nt~e~fk~~dk~~ll~~~~~~i~~~-----~~~~p~~l~~f~~~~faDlKk~~f~yw~afP~~~~~~ 152 (598)
T 3vh1_A 78 TNEVPLQGSIFNFNVLDEFKNLDKQLFLHQRALECWED-----GIKDINKCVSFVIISFADLKKYRFYYWLGVPCFQRPS 152 (598)
T ss_dssp TTCEEEEEEEEEESSHHHHHTSCHHHHHHHHHHHHHHH-----HTTCGGGCCCEEEEEEEETTTTEEEEEEEEEEEESST
T ss_pred CceEEEEeEEEeeecHHHHhhcCHHHHHHHHHHHHHHH-----hhcchhHHHHHHHHHHhhhcceEEEEEEEEeccCCCC
Confidence 35689999999999999999999999999999999999 6889999999999999999999999999999999998
Q ss_pred CeeeeccCcccccCChHHHHHHHHHHhhhhhcC-CCCCccEEEEEeecCCcceeccccchhhhcCCCcceEEEEecCCCC
Q 005071 170 PATVVDLKPASLWFSSQEAESVSAACSDWRNSS-LTADVPYFLLTIAPNSRATIRHLKDWEACEGDGQKLLFGFYDPCHL 248 (715)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~F~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~f~Dps~~ 248 (715)
+|++.. ++.++.+.+.+ |+++. +....+||++... .+++.+|++|.. ..++ ++ +|+|||++
T Consensus 153 ~~~~~~-------~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~~~--~~~~-~~-~f~dps~~ 214 (598)
T 3vh1_A 153 STVLHV-------RPEPSLKGLFS----KCQKWFDVNYSKWVCILDA---DDEIVNYDKCII--RKTK-VL-AIRDTSTM 214 (598)
T ss_dssp TCCEEE-------EEECCCHHHHH----HHHHHHHHCTTCSEEEECT---TCCEEECCHHHH--HHHC-EE-EEECCBCS
T ss_pred ceeEec-------CCHHHHHHHHH----HhhccccccccceEEEEec---cceEeehhhcCC--Cccc-EE-EEECCCCC
Confidence 888753 22333444443 66533 3456789998754 466666755411 1223 66 99999999
Q ss_pred CCCCChhHHHHHHHHHhhcC-ceeEEEEEEEcCCCcccCCCceEEEEEeecCCCCCCCCCCcccccEEec-CCcccceEe
Q 005071 249 QNHPGWPLRNFLALILTRWK-LKSVLFLCYRENRGFTDLGLSLVGEALITVPQGWGDHQCVPNTVGWELN-KGRKVPRCI 326 (715)
Q Consensus 249 ~~~pgw~lRN~l~~~~~~~~-~~~~~v~~~R~~~~~~~~~~S~~~~~~~~~~~~~~~~~~~~~~~gwe~~-~gkl~pr~~ 326 (715)
+++|||||||||+++++||+ +++++|+|||+ +++++.+|+++++.++..... . ..|+++|||++ +||+.|+.+
T Consensus 215 ~~~pgw~lrn~l~~~~~~~~~~~~~~~~~~r~--~~~~~~~s~~~~~~~~~~~~~--~-~~~~~~gwe~~~~Gkl~g~~t 289 (598)
T 3vh1_A 215 ENVPSALTKNFLSVLQYDVPDLIDFKLLIIRQ--NEGSFALNATFASIDPQSSSS--N-PDMKVSGWERNVQGKLAPRVV 289 (598)
T ss_dssp TTCCBTTHHHHHHHHHHHCSSCCEEEEEEECS--SSCCEEEEEEECCCCC----------CCEEEEECCCTTSSSSCEEE
T ss_pred ccCchHHHHHHHHHHHHhCCCCceeEEEEEec--CCCccCceEEEEEecCccccc--c-cCCcCcCccCCCCCCCcceee
Confidence 99999999999999999999 69999999999 446677899999988743211 1 47999999999 999999999
Q ss_pred cccCCCChhhhhhhhhhhhhhhhhhhcCCchhHHhhccCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeCCcccccCCCc
Q 005071 327 SLAKSMDPTRLAISAADLNLKLMRWRQLPSLNLDILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLR 406 (715)
Q Consensus 327 dl~~~~dp~~la~~a~dlnlry~R~rllp~~gq~kL~~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~D~Ve~sNl~R 406 (715)
|+...|+|.+++++++++|+++||||++|++||++|+++||+||||||+||+||++|+++|||+|+|||+|+|+.|||+|
T Consensus 290 D~~g~l~~~~la~~~~~lnL~lmrwrll~~~gq~kL~~~kVLIVGaGGLGs~va~~La~aGVG~ItLvD~D~Ve~SNL~R 369 (598)
T 3vh1_A 290 DLSSLLDPLKIADQSVDLNLKLMKWRILPDLNLDIIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVR 369 (598)
T ss_dssp ECHHHHCHHHHHHHHHHHHHHHHHHHHCTTCCHHHHHTCEEEEECCSHHHHHHHHHHHTTTCCEEEEECCSBCCTTSTTT
T ss_pred cchhccCHHHHHHHHHhhhhhhhhhhccchhhHHHHhCCeEEEECCCHHHHHHHHHHHHcCCCEEEEECCCccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcchhcCCCCcHHHHHHHHHHhhCCCcEEEEEecccCCCCCCCCCccccccccchhhHHHhhccCCEEEEeCCChH
Q 005071 407 QSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTRE 486 (715)
Q Consensus 407 Q~L~~~~Di~~~G~~KAeaaa~~L~~inP~v~v~~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~e 486 (715)
|+||+.+|+ |++||++|+++|+++||+++++++...||||||+++.++. .+.+.+++.++++++|+||+|+||++
T Consensus 370 Q~L~~~~Dv---G~~KAeaaa~~L~~iNP~v~v~~~~~~I~~pgh~i~~~~~--~~l~~~~l~~li~~~DvVvdatDn~~ 444 (598)
T 3vh1_A 370 QALYNFEDC---GKPKAELAAASLKRIFPLMDATGVKLSIPMIGHKLVNEEA--QHKDFDRLRALIKEHDIIFLLVDSRE 444 (598)
T ss_dssp STTCCSTTC---SSBHHHHHHHHHHHHCTTCEEEEECCCCCCSSCCCCSHHH--HHHHHHHHHHHHHHCSEEEECCSBGG
T ss_pred ccccchhhc---CcHHHHHHHHHHHhHCCCcEEEEEeccccccCcccccccc--cccCHHHHHHHHhcCCEEEECCCCHH
Confidence 999999999 9999999999999999999999999999999999874221 23456788899999999999999999
Q ss_pred HHHHHHHHHHhcCCeEEEeeeCCceEEEEEcCCCCCcccccccchhccCccccccccCCCCCCCCCCcCceeecccCCCC
Q 005071 487 SRWLPTLLCANTNKITITAALGFDSFLVMRHGPGPFSITHDVKTEAVNGLSADMDNLGLNNRDGGQRLGCYFCNDVVAPT 566 (715)
Q Consensus 487 sR~li~~~~~~~~kp~I~aalG~~g~vv~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gCy~C~d~~aP~ 566 (715)
+|++++++|+++++|+|++++|++||++++||..|. +...++|||+|+++.+|.
T Consensus 445 tR~lin~~c~~~~~plI~aa~G~~Gqv~v~~g~~p~--------------------------~~~~~~~Cy~Cl~~~~p~ 498 (598)
T 3vh1_A 445 SRWLPSLLSNIENKTVINAALGFDSYLVMRHGNRDE--------------------------QSSKQLGCYFCHDVVAPT 498 (598)
T ss_dssp GTHHHHHHHHHTTCEEEEEEECSSEEEEEEEC----------------------------------CBCCTTTSCSSCSS
T ss_pred HHHHHHHHHHhcCCCEEEEEECCccEEEEEccCCCc--------------------------cCCCCCCceeecCccCCC
Confidence 999999999999999999999999999999974330 112368999999999998
Q ss_pred CCCccccccccccccCcchHHHHHHHHHHHHHHHhcCCCCCCCCccccCCCCCCCCCCCCCceeEEEecCCCCeeeEEec
Q 005071 567 DSTANRTLDQQCTVTRPGLAPIASALAVELFVGVLHHPKGIYAGAEFANSIDSGSSEQPLGILPHQIRGSLSQFSQMTLV 646 (715)
Q Consensus 567 ~s~~drtLdq~CtV~~Pgv~~ias~~A~Ell~~ll~hp~g~~a~~~~~~~~~~~~~~~~Lg~~p~~irg~~~~f~~~~l~ 646 (715)
++..++|+|++|+|++|++++||++||+|+|+.|++|+. +|+.. +++|..||++||++..|+++++.
T Consensus 499 ~~~~~~tld~~C~Vl~p~vgvigslqA~Ealk~Llg~~~---ap~~~----------~~~g~l~~~l~g~l~~f~~~~l~ 565 (598)
T 3vh1_A 499 DSLTDRTLDQMCTVTRPGVAMMASSLAVELMTSLLQTKY---SGSET----------TVLGDIPHQIRGFLHNFSILKLE 565 (598)
T ss_dssp SCTTTTTTTBSCCCSCTHHHHHHHHHHHHHHHHHHSCCC---SSSSE----------ETTEECCSEEEEETTTTEEEEEC
T ss_pred ccccccccCCCCCccCcHHHHHHHHHHHHHHHHHhCCCc---ccccc----------cccccccceeecccccceeEecc
Confidence 888888999999999999999999999999999998765 44332 46888899999999999999998
Q ss_pred CCCCCCCCCCChhHHHHHHHhCHHHHHHHhcCC
Q 005071 647 GHSSNSCTACCSTVVSEYRKRGMEFILQAINHP 679 (715)
Q Consensus 647 ~~~~~~C~aCs~~v~~~y~~~g~~f~~~~~~~~ 679 (715)
..++++|++||..++++|+++||+||++|||+|
T Consensus 566 ~~r~~~C~~Cg~~~~~~~~~~~~~f~~~~~n~~ 598 (598)
T 3vh1_A 566 TPAYEHCPACSPKVIEAFTDLGWEFVKKALEHP 598 (598)
T ss_dssp CBCCTTCTTTSHHHHHHHHHHTHHHHHHHHHCC
T ss_pred CCCCCCCCCCchHHHHHHHhCcHHHHHHHhcCC
Confidence 889999999999999999999999999999986
No 3
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=100.00 E-value=4.8e-82 Score=678.46 Aligned_cols=332 Identities=52% Similarity=0.895 Sum_probs=302.3
Q ss_pred ChhhhhhhhhhhhhhhhhhhcCCchhHHhhccCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeCCcccccCCCcCCCCCc
Q 005071 333 DPTRLAISAADLNLKLMRWRQLPSLNLDILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTL 412 (715)
Q Consensus 333 dp~~la~~a~dlnlry~R~rllp~~gq~kL~~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~D~Ve~sNl~RQ~L~~~ 412 (715)
||.+|+++++|+|+|+||||++|++|+++|+++||+||||||+||++|++|+++|||+|+|||+|+|++|||+||+||+.
T Consensus 3 ~p~~~~~~~~~lnl~lm~wRll~~~g~~kL~~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D~Ve~SNL~RQ~l~~~ 82 (340)
T 3rui_A 3 DPLKIADQSVDLNLKLMKWRILPDLNLDIIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNF 82 (340)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTCTTCCHHHHHTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCBCCTTSTTTSTTCCG
T ss_pred CHHHHHHHHHHHHHHHHHHhhcchhhHHHHhCCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCCEeccccccccccCCh
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhcCCCCcHHHHHHHHHHhhCCCcEEEEEecccCCCCCCCCCccccccccchhhHHHhhccCCEEEEeCCChHHHHHHH
Q 005071 413 DDCLNGGDFKAMAAVKSLERIFPAVAAEGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTRESRWLPT 492 (715)
Q Consensus 413 ~Di~~~G~~KAeaaa~~L~~inP~v~v~~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~esR~li~ 492 (715)
+|+ |++||++++++|+++||+++++++..+|||||||++++ ++.+.+.+++.++++++|+||+|+||+++|++++
T Consensus 83 ~di---G~~Ka~aaa~~L~~inP~v~v~~~~~~i~~~g~~~~~~--~~~~~~~~~l~~~l~~~DlVvd~tDn~~tR~lin 157 (340)
T 3rui_A 83 EDC---GKPKAELAAASLKRIFPLMDATGVKLSIPMIGHKLVNE--EAQHKDFDRLRALIKEHDIIFLLVDSRESRWLPS 157 (340)
T ss_dssp GGT---TSBHHHHHHHHHHHHCTTCEEEEECCCCCCTTSCCSCH--HHHHHHHHHHHHHHHHCSEEEECCSSTGGGHHHH
T ss_pred hhc---ChHHHHHHHHHHHHhCCCCEEEEEeccccccCcccchh--hhhcCCHHHHHhhhccCCEEEecCCCHHHHHHHH
Confidence 999 99999999999999999999999999999999999852 3345567788999999999999999999999999
Q ss_pred HHHHhcCCeEEEeeeCCceEEEEEcCCCCCcccccccchhccCccccccccCCCCCCCCCCcCceeecccCCCCCCCccc
Q 005071 493 LLCANTNKITITAALGFDSFLVMRHGPGPFSITHDVKTEAVNGLSADMDNLGLNNRDGGQRLGCYFCNDVVAPTDSTANR 572 (715)
Q Consensus 493 ~~~~~~~kp~I~aalG~~g~vv~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gCy~C~d~~aP~~s~~dr 572 (715)
++|+++++|+|++++||+||++++||.... ..+.++|||+|+++++|.++..++
T Consensus 158 ~~c~~~~~plI~aa~G~~G~l~v~~g~~~~--------------------------~~~~~~~Cy~C~~~~~p~~~~~~~ 211 (340)
T 3rui_A 158 LLSNIENKTVINAALGFDSYLVMRHGNRDE--------------------------QSSKQLGCYFCHDVVAPTDSLTDR 211 (340)
T ss_dssp HHHHHTTCEEEEEEECSSEEEEEECCCCCS--------------------------SCCCCBCCGGGGSSSCCCCCTTTC
T ss_pred HHHHHcCCcEEEeeecceEEEEEeeccccc--------------------------CCCCCCCeeeeCCCCCCccccccc
Confidence 999999999999999999999999975310 113578999999999999999999
Q ss_pred cccccccccCcchHHHHHHHHHHHHHHHhcCCCCCCCCccccCCCCCCCCCCCCCceeEEEecCCCCeeeEEecCCCCCC
Q 005071 573 TLDQQCTVTRPGLAPIASALAVELFVGVLHHPKGIYAGAEFANSIDSGSSEQPLGILPHQIRGSLSQFSQMTLVGHSSNS 652 (715)
Q Consensus 573 tLdq~CtV~~Pgv~~ias~~A~Ell~~ll~hp~g~~a~~~~~~~~~~~~~~~~Lg~~p~~irg~~~~f~~~~l~~~~~~~ 652 (715)
|++++|+|++|++++||++||+|+||+|++||.+.. .++++|..||+|||+.++|+++++.++++++
T Consensus 212 t~~~~c~v~~p~vg~igs~qA~E~lk~l~~~~~~~~-------------~~~~~G~l~~~~d~~~~~f~~~~l~~~~~~~ 278 (340)
T 3rui_A 212 TLDQMSTVTRPGVAMMASSLAVELMTSLLQTKYSGS-------------ETTVLGDIPHQIRGFLHNFSILKLETPAYEH 278 (340)
T ss_dssp CCGGGGGCSCHHHHHHHHHHHHHHHHHHTSCCCTTS-------------SEETTEECCSEEEEETTTTEEEEECCBCCTT
T ss_pred ccCCCcceecchHHHHHHHHHHHHHHHHhCCCCCcc-------------ccCccCcccEEEecCcCCceEEEecCCCCCC
Confidence 999999999999999999999999999999876532 1246777799999999999999999889999
Q ss_pred CCCCChhHHHHHHHhCHHHHHHHhcCCchhhhccChhHHHHhhcccc--c-cccCCCCC
Q 005071 653 CTACCSTVVSEYRKRGMEFILQAINHPTYLEDLTGLTELKKSANSFH--V-DWDYESDN 708 (715)
Q Consensus 653 C~aCs~~v~~~y~~~g~~f~~~~~~~~~~le~~~Gl~~~~~~~~~~~--~-~~~~~~~~ 708 (715)
|++||..++++|+++||+||+++||+|+|||++|||+++|++++++. + +||+||+|
T Consensus 279 C~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 337 (340)
T 3rui_A 279 CPACSPKVIEAFTDLGWEFVKKALEHPLYLEEISGLSVIKQEVERLGNDVFEWEDDESD 337 (340)
T ss_dssp CTTTCHHHHHHHHHHTHHHHHHHHHCHHHHHHHHTHHHHHHHHHTSCTTSCC-------
T ss_pred CCCCCHHHHHHHHhCCHHHHHHHhcCccHhHHhcCHHHHHHHHHHHhhhhhhccCcchh
Confidence 99999999999999999999999999999999999999999998874 4 89876554
No 4
>3vx8_D Ubiquitin-like modifier-activating enzyme ATG7; E1-E2 complex, ligase; 3.11A {Arabidopsis thaliana}
Probab=100.00 E-value=7.4e-81 Score=666.29 Aligned_cols=317 Identities=69% Similarity=1.223 Sum_probs=274.3
Q ss_pred CCceeeecCccCCChhhHHHHHhCCccccCCCCCCeeEEEEecCCCCCCCcceEEEecCCCCCCCcccccccccccCCCc
Q 005071 12 GSILQFAPFQSSVDEGFWHRLSSLKLNKLGIDESPIPITGFYAPCSHLQVSNHLSLLTESLPSDSDEQSSTAEISRGSRN 91 (715)
Q Consensus 12 ~~~l~f~p~~s~vd~~Fw~~L~~~KL~~~kLd~~~~~i~g~~~~~~~~~~~~~l~Ld~~SF~~~~~~~~~~~~~~~~~~~ 91 (715)
+.+|||+||+|+||++|||+|+++|||+|||||+|++|+|+|++++..+.+++|+|+++||+.+....... ....+.+
T Consensus 6 ~~~LqF~Pf~S~vd~sFw~~Ls~lKLd~~KLdds~~~I~g~y~~~~~~~~~~~l~l~~~sf~~~~~~~~~~--~~~~~~~ 83 (323)
T 3vx8_D 6 AIILQFAPLNSSVDEGFWHSFSSLKLDKLGIDDSPISITGFYGPCGHPQVSNHLTLLSESLPLDEQSLIAS--TSHGNRN 83 (323)
T ss_dssp -CBCCCBCCCEEECHHHHHHHHHHHHHTTTTCCCCEEEEEEECSCCBTTBCCCEEECGGGCC--------------CBTT
T ss_pred ccceeecCcccccCchHHHHHHhcccchhccCCCCceeEEEEecCCCCCCCceEEecHHHcCCcccccccc--cccCCCC
Confidence 35899999999999999999999999999999999999999999988889999999999998542100000 0112346
Q ss_pred eeeeeeeEEeccchHHhhccCHHHHHHHHHHHHHHhhhcCCcccCcccccchheeeeeccCCcEEEEEEEeeccCCCCCe
Q 005071 92 KCTVPGTLYNSNTLESFYTIDKQSLLKQEAKKIWEDIHSGKAVEDSTVLSRFLVISFADLKKWSFHYWFAFPALVLDPPA 171 (715)
Q Consensus 92 ~~~~~G~l~n~NTie~fk~~DK~~lL~~~g~~Iw~~i~~g~~~~~p~~l~~F~~ltfaDLKky~f~YwfafPa~~~~~~~ 171 (715)
+++++|+|+|+||||+||++||++||+++|++||++|++|++++||++|++|+|||||||||||||||||||||+++++|
T Consensus 84 ~~~~~G~L~N~NTiE~FK~~DK~~ll~~~~~~iw~~I~sg~~~~dpslL~~F~ilsFADLKKykFyYWfafPal~~~~~~ 163 (323)
T 3vx8_D 84 KCPVPGILYNTNTVESFNKLDKQSLLKAEANKIWEDIQSGKALEDPSVLPRFLVISFADLKKWSFRYWFAFPAFVLDPPV 163 (323)
T ss_dssp BEEEEEEEEEESSHHHHHHSCSHHHHHHHHHHHHHHHHHTHHHHCGGGTTCEEEEEEEETTTTEEEEEEEEEEECCSSCC
T ss_pred ceEEEEEEEEeecHHHHhhhCHHHHHHHHHHHHHHHHhcCccccCHHHhhhhhhhhhhhhccceEEEEEEecCcCCCccc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeccCcccccCChHHHHHHHHHHhhhhhcCCCCCccEEEEEeecCCcceeccccchhhhcCC-CcceEEEEecCCCCCC
Q 005071 172 TVVDLKPASLWFSSQEAESVSAACSDWRNSSLTADVPYFLLTIAPNSRATIRHLKDWEACEGD-GQKLLFGFYDPCHLQN 250 (715)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~F~l~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~f~Dps~~~~ 250 (715)
++.........|+.+++..+.+.+++|++.....+.+||++....+..+++++|++|+.++.. .++++ ||+|||++++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~fFl~~~~~~~~~~~~~L~~~~~~~~~~~~~~~-~F~Dps~~~~ 242 (323)
T 3vx8_D 164 SLIELKPASEYFSSEEAESVSAACNDWRDSDLTTDVPFFLVSVSSDSKASIRHLKDLEACQGDHQKLLF-GFYDPCHLPS 242 (323)
T ss_dssp EEEEEEEHHHHSCHHHHHHHHHHHHHHHHSTTSTTCCEEEEEEETTSCEEEECGGGHHHHCSTTEEEEE-EEECCCCCTT
T ss_pred eeecccccccccCHHHHHHHHHHHHHHHhcccccccceEEEEecCCCceeeechhhhhhccccCCceEE-EEEcCCCCCC
Confidence 886543333478888999999999999998766678899998876677899999999875553 45677 9999999999
Q ss_pred CCChhHHHHHHHHHhhcCceeEEEEEEEcCCCcccCCCceEEEEEeecCCCCCCCCCCcccccEEecCCcccceEecccC
Q 005071 251 HPGWPLRNFLALILTRWKLKSVLFLCYRENRGFTDLGLSLVGEALITVPQGWGDHQCVPNTVGWELNKGRKVPRCISLAK 330 (715)
Q Consensus 251 ~pgw~lRN~l~~~~~~~~~~~~~v~~~R~~~~~~~~~~S~~~~~~~~~~~~~~~~~~~~~~~gwe~~~gkl~pr~~dl~~ 330 (715)
+|||||||||++|++||++++++|||||+..|+++..+|+++++++++..+. .....|+++|||+|+|||+||++||++
T Consensus 243 ~PGWpLRNlL~ll~~~~~~~~v~vlc~Rd~~~~~~~~~Siil~~~~~~~~~~-~~~~~pk~vGWErn~GKl~PR~vdLs~ 321 (323)
T 3vx8_D 243 NPGWPLRNYLALIRSRWNLETVWFFCYRESRGFADLNLSLVGQASITLSSGE-SAETVPNSVGWELNKGKRVPRSISLAN 321 (323)
T ss_dssp CCBTTHHHHHHHHHHHHCCSEEEEEEECEETTEECTTTCEEEEEECCC------CCSCCCEEEECCBTTBSCCEEEECST
T ss_pred CCCHHHHHHHHHHHHhcCCceEEEEEEecCCCCcCccceEEEEEeccccccc-cccCCCccccccccCCcccceEechHh
Confidence 9999999999999999999999999999988999999999999999863211 113678999999999999999999998
Q ss_pred CC
Q 005071 331 SM 332 (715)
Q Consensus 331 ~~ 332 (715)
+|
T Consensus 322 ~M 323 (323)
T 3vx8_D 322 SM 323 (323)
T ss_dssp TC
T ss_pred cC
Confidence 87
No 5
>3vx6_A E1; 2.60A {Kluyveromyces marxianus} PDB: 3vx7_A
Probab=100.00 E-value=2.9e-75 Score=611.59 Aligned_cols=276 Identities=25% Similarity=0.338 Sum_probs=228.9
Q ss_pred CCCceeeec-CccCCChhhHHHHHhCCccccCCCCCCeeEEEEecCCCCCCCcceEEEecCCCCCCCcccccccccccCC
Q 005071 11 GGSILQFAP-FQSSVDEGFWHRLSSLKLNKLGIDESPIPITGFYAPCSHLQVSNHLSLLTESLPSDSDEQSSTAEISRGS 89 (715)
Q Consensus 11 ~~~~l~f~p-~~s~vd~~Fw~~L~~~KL~~~kLd~~~~~i~g~~~~~~~~~~~~~l~Ld~~SF~~~~~~~~~~~~~~~~~ 89 (715)
++.+|||+| |+|+||++|||+|+++|||+|||||+|++|+|+|++++..+.+++|+|+++||+.+.. +
T Consensus 5 ~~~~LqF~P~f~S~vd~sFw~~Ls~lKLd~~KLdds~~~I~g~y~~~~~~~~~~~l~l~~~sf~~~~~-----------~ 73 (283)
T 3vx6_A 5 MVSDLKFAPSFQSFVDSSFFHELSRLKLDIFKLDSDEKALYTQLDLNQFTSNVLAISLRDDSFQKPDN-----------D 73 (283)
T ss_dssp ---CCCCBCSCEEEECHHHHHHHHHHHHHTTCCSCEEEEEEEECCSSSCBTTBCEEEECGGGGSCCC-------------
T ss_pred ccccccccCCcccccCchHHHHHHhcccchhccCCCCceeEEEEecCCCCCCCceEEEeHHHcCCCCC-----------C
Confidence 346899999 9999999999999999999999999999999999999888899999999999986532 3
Q ss_pred CceeeeeeeEEeccchHHhhccCHHHHHHHHHHHHHHhhhcCCcccCcccccchheeeeeccCCcEEEEEEEeeccCCCC
Q 005071 90 RNKCTVPGTLYNSNTLESFYTIDKQSLLKQEAKKIWEDIHSGKAVEDSTVLSRFLVISFADLKKWSFHYWFAFPALVLDP 169 (715)
Q Consensus 90 ~~~~~~~G~l~n~NTie~fk~~DK~~lL~~~g~~Iw~~i~~g~~~~~p~~l~~F~~ltfaDLKky~f~YwfafPa~~~~~ 169 (715)
.++++++|+|+|+||||+||++||++||+++|++||+ +| +.+||++|++|+|||||||||||||||||||||++++
T Consensus 74 ~~~~~~~G~l~N~NTiE~FK~~DK~~ll~~~~~~i~~---sg-~~~dpslL~~F~ilsFADLKKykFyYWfafPal~~~~ 149 (283)
T 3vx6_A 74 EHNIILKGYLLNFNTIELFKNCNKIQFIKEKGQELLQ---RG-LENDLNEIISFYMISFADLKKYKFYYWICMPSFQSDG 149 (283)
T ss_dssp -CCCEEEEEEEEESSHHHHHHSCHHHHHHHHHHHHHH---HH-HHTCGGGGCCEEEEEEEETTTTEEEEEEEEEECCBTT
T ss_pred CCceeeeEEEEEeccHHHHHhcCHHHHHHHHHHHHHH---cc-cccCHHHhhhhhhhhhhhhcccEEEEEEEeccccCCc
Confidence 4678999999999999999999999999999999999 56 4559999999999999999999999999999999999
Q ss_pred CeeeeccCcccccCChHHHHHHHHHHhhhhhcCCCCC-ccEEEEEeecCCcceeccccchhhhcCCCcceEEEEecCCCC
Q 005071 170 PATVVDLKPASLWFSSQEAESVSAACSDWRNSSLTAD-VPYFLLTIAPNSRATIRHLKDWEACEGDGQKLLFGFYDPCHL 248 (715)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~F~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~f~Dps~~ 248 (715)
+|++..... .+.. ++|+.. .. .+||++.. +.+++|++|+.....+++++ ||+|||++
T Consensus 150 ~~~~~~~~~---~~~~----------~~~~~~---~~~~~ffl~~~-----~~~~~L~~~~~~~~~~~~~~-~f~Dps~~ 207 (283)
T 3vx6_A 150 ATYQIISSK---VIAS----------DSDISV---SFIKQNVIIAC-----VISGVIQKATPDNLKVCEKV-VFKDFSHL 207 (283)
T ss_dssp CEEEEEEEE---ECCT----------TSHHHH---HHHTSSCSEEE-----EETTEEECCCHHHHHHCSEE-EEECSBCS
T ss_pred cceeccCcc---ccch----------hhhhhc---cccCCEEEEEe-----ccccchhhhccccCCCceEE-EEECCCCC
Confidence 988754211 1121 244432 23 46887765 45566777776444557888 99999999
Q ss_pred CCCCChhHHHHHHHHHhhcCceeEEEEEEEcCCCcccCCCceEEEEEeecCCCCCCCCCCcccccEEec-CCcccceEec
Q 005071 249 QNHPGWPLRNFLALILTRWKLKSVLFLCYRENRGFTDLGLSLVGEALITVPQGWGDHQCVPNTVGWELN-KGRKVPRCIS 327 (715)
Q Consensus 249 ~~~pgw~lRN~l~~~~~~~~~~~~~v~~~R~~~~~~~~~~S~~~~~~~~~~~~~~~~~~~~~~~gwe~~-~gkl~pr~~d 327 (715)
+++|||||||||++|++||++++++|+|||+..+ |+++++++++. ....|+++|||+| +|||+||++|
T Consensus 208 ~~~PGWpLRNlL~ll~~~~~~~~v~vl~~R~~~~------S~~~~l~~~~~-----~~~~pk~vGWErn~~GKl~Pr~vd 276 (283)
T 3vx6_A 208 KDIPSAVTKNILTVWSKLSPRETYTICFLRSDES------SFEAEIIINNG-----NNPSLKVSGWEKNGLGKLAPKSID 276 (283)
T ss_dssp TTCCBTTHHHHHHHHHHHSCCSCEEEEEECTTTT------CEEEEEEEEST-----TCSSBCCEEECC-----CCCEEEC
T ss_pred CCCCCHHHHHHHHHHHHhcCCceEEEEEEeCCCC------cEEEEEEecCC-----CCcCCcccccCCCCCCCcCceEec
Confidence 9999999999999999999999999999998764 99999999863 2357899999999 9999999999
Q ss_pred ccCCCCh
Q 005071 328 LAKSMDP 334 (715)
Q Consensus 328 l~~~~dp 334 (715)
|+++|||
T Consensus 277 Ls~~MDP 283 (283)
T 3vx6_A 277 LSSLMDP 283 (283)
T ss_dssp CCCC---
T ss_pred hhhccCc
Confidence 9999998
No 6
>3t7h_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, ligase; 1.60A {Saccharomyces cerevisiae} PDB: 3t7f_A 3t7g_A 3ruj_A 4gsj_A*
Probab=100.00 E-value=3.9e-74 Score=606.25 Aligned_cols=279 Identities=27% Similarity=0.442 Sum_probs=236.1
Q ss_pred Cceeee-cCccCCChhhHHHHHhCCccccCCCCCCeeEEEEecCCC--CCCCcceEEEecCCCCCCCcccccccccccCC
Q 005071 13 SILQFA-PFQSSVDEGFWHRLSSLKLNKLGIDESPIPITGFYAPCS--HLQVSNHLSLLTESLPSDSDEQSSTAEISRGS 89 (715)
Q Consensus 13 ~~l~f~-p~~s~vd~~Fw~~L~~~KL~~~kLd~~~~~i~g~~~~~~--~~~~~~~l~Ld~~SF~~~~~~~~~~~~~~~~~ 89 (715)
.+|||+ ||+|+||++|||+|+++|||+|||||+|++|+|+|++++ ..+.+++|+|+++||+.+.. .+
T Consensus 7 ~~LqF~~Pf~S~vd~~Fw~~Ls~lKLd~~KLdds~~~I~g~y~~~~~~~~~~~~~l~l~~~sf~~~~~----------~~ 76 (291)
T 3t7h_A 7 RVLSYAPAFKSFLDTSFFQELSRLKLDVLKLDSTCQPLTVNLDLHNIPKSADQVPLFLTNRSFEKHNN----------KR 76 (291)
T ss_dssp EECCCBCSEEEEECHHHHHHHHHHHTTCTTCSEEEEEEEEEECSSCCCTTCSBEEEEECGGGGC---------------C
T ss_pred CceeeccCcccccChHHHHHHHhcccchhccCCCCceEEEEEccCccccCCCCcEEEEeHHHCCCCCC----------CC
Confidence 489999 999999999999999999999999999999999999987 78889999999999986531 13
Q ss_pred CceeeeeeeEEeccchHHhhccCHHHHHHHHHHHHHHhhhcCCcccCcccccchheeeeeccCCcEEEEEEEeeccCCCC
Q 005071 90 RNKCTVPGTLYNSNTLESFYTIDKQSLLKQEAKKIWEDIHSGKAVEDSTVLSRFLVISFADLKKWSFHYWFAFPALVLDP 169 (715)
Q Consensus 90 ~~~~~~~G~l~n~NTie~fk~~DK~~lL~~~g~~Iw~~i~~g~~~~~p~~l~~F~~ltfaDLKky~f~YwfafPa~~~~~ 169 (715)
.++++++|+|+|+||||+||++||++||+++|++||++ | ++||++|++|+|||||||||||||||||||||++++
T Consensus 77 ~~~~~~~G~l~N~NTiEeFK~~DK~~ll~~~~~~i~~~---g--~~dpslL~~F~ilsFADLKKykFyYWfafPal~~~~ 151 (291)
T 3t7h_A 77 TNEVPLQGSIFNFNVLDEFKNLDKQLFLHQRALECWED---G--IKDINKCVSFVIISFADLKKYRFYYWLGVPCFQRPS 151 (291)
T ss_dssp TTCEEEEEEEEEESSHHHHHHCCHHHHHHHHHHHHHHH---H--TTCGGGCCCEEEEEEEETTTTEEEEEEEEEEEESST
T ss_pred CCceeeeEEEEEeccHHHHhhcCHHHHHHHHHHHHHhc---c--ccChHHhhhhheehhhhhcccEEEEEEEEccccCCc
Confidence 56789999999999999999999999999999999995 4 789999999999999999999999999999999999
Q ss_pred CeeeeccCcccccCChHHHHHHHHHHhhhhhcCCCCCccEEEEEeecCCcceeccccchhhhcCCCcceEEEEecCCCCC
Q 005071 170 PATVVDLKPASLWFSSQEAESVSAACSDWRNSSLTADVPYFLLTIAPNSRATIRHLKDWEACEGDGQKLLFGFYDPCHLQ 249 (715)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~F~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~f~Dps~~~ 249 (715)
+|++.... .+++..+.+.+++|+.. ...+||++... +++|++|+.....+++++ ||+|||+++
T Consensus 152 ~~~~~~~~-------~~~~~~l~~~~~~~~~~---~~~~ffl~~~~------~~~L~~~~~~~~~~~~~~-~f~Dps~~~ 214 (291)
T 3t7h_A 152 STVLHVRP-------EPSLKGLFSKCQKWFDV---NYSKWVCILDA------DDEIVNYDKCIIRKTKVL-AIRDTSTME 214 (291)
T ss_dssp TEEEEEEE-------CGGGGGGHHHHHHHHHH---CTTCSEEEECT------TSCEEECCHHHHHHHCEE-EEECCBCST
T ss_pred ccccccCC-------chhhHHHHHHHHHHHhc---cCCcEEEEEcc------ccchhhhhcccCCCceEE-EEECCCCCC
Confidence 99875421 13444456677888754 35678988763 245677765444457888 999999999
Q ss_pred CCCChhHHHHHHHHH-hhcCceeEEEEEEEcCCCcccCCCceEEEEEeecCCCC-CCCCCCcccccEEec-CCcccceEe
Q 005071 250 NHPGWPLRNFLALIL-TRWKLKSVLFLCYRENRGFTDLGLSLVGEALITVPQGW-GDHQCVPNTVGWELN-KGRKVPRCI 326 (715)
Q Consensus 250 ~~pgw~lRN~l~~~~-~~~~~~~~~v~~~R~~~~~~~~~~S~~~~~~~~~~~~~-~~~~~~~~~~gwe~~-~gkl~pr~~ 326 (715)
++|||||||||++|+ +||++++++|+|||+..+ |++++++++...+. ......|+++|||+| +|||+||++
T Consensus 215 ~~PGWpLRNlL~ll~~~~~~~~~v~vlc~Rd~~~------S~i~~l~l~~~~~~~~~~~~~pk~vGWErn~~GKl~PR~v 288 (291)
T 3t7h_A 215 NVPSALTKNFLSVLQYDVPDLIDFKLLIIRQNEG------SFALNATFASIDPQSSSSNPDMKVSGWERNVQGKLADRVV 288 (291)
T ss_dssp TCCBTTHHHHHHHHHHHCTTCCEEEEEEECSSSC------CEEEEEEEEECC-----CCCCCEEEEECCCTTSSSCCEEE
T ss_pred CCCCHHHHHHHHHHHHhccCCceEEEEEEeCCCC------cEEEEEEcccccccccccccCCcccccCCCCCCCccceee
Confidence 999999999999998 789999999999998764 99999999874211 123467999999999 999999999
Q ss_pred ccc
Q 005071 327 SLA 329 (715)
Q Consensus 327 dl~ 329 (715)
||+
T Consensus 289 dLs 291 (291)
T 3t7h_A 289 DLS 291 (291)
T ss_dssp EC-
T ss_pred cCC
Confidence 985
No 7
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=100.00 E-value=5e-44 Score=377.58 Aligned_cols=239 Identities=18% Similarity=0.271 Sum_probs=176.7
Q ss_pred hhhhhhhhcCCchh----HHhhccCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeCCcccccCCCcCCCCCcchhcCCCC
Q 005071 345 NLKLMRWRQLPSLN----LDILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGD 420 (715)
Q Consensus 345 nlry~R~rllp~~g----q~kL~~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~ 420 (715)
.+.|+||++++++| |++|+++||+|||+||+||++|++|+++|||+|+|+|+|+|+.|||+||+ |+.+|+ |+
T Consensus 13 ~~~y~r~i~L~~~G~~~~q~kL~~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~-~~~~di---G~ 88 (292)
T 3h8v_A 13 GLVPRGSMALKRMGIVSDYEKIRTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLF-FQPHQA---GL 88 (292)
T ss_dssp -------------------CGGGGCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBC-------------CCT---TS
T ss_pred CCCchHhhcccccChHHHHHHHhCCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCccChhhccccc-CChhhc---Cc
Confidence 46899999998775 78999999999999999999999999999999999999999999999985 789999 99
Q ss_pred cHHHHHHHHHHhhCCCcEEEEEecccCCCCCCCCCccccccccchhhHHHhh-----------ccCCEEEEeCCChHHHH
Q 005071 421 FKAMAAVKSLERIFPAVAAEGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLI-----------LSHDVIFLLTDTRESRW 489 (715)
Q Consensus 421 ~KAeaaa~~L~~inP~v~v~~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li-----------~~~DvV~~~tDs~esR~ 489 (715)
+||++|+++|+++||+++++.+..++ .+.+++++++ +++|+||||+||+++|+
T Consensus 89 ~Ka~aa~~~L~~iNP~v~v~~~~~~l----------------~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~Dn~~~R~ 152 (292)
T 3h8v_A 89 SKVQAAEHTLRNINPDVLFEVHNYNI----------------TTVENFQHFMDRISNGGLEEGKPVDLVLSCVDNFEARM 152 (292)
T ss_dssp BHHHHHHHHHHHHCTTSEEEEECCCT----------------TSHHHHHHHHHHHHHBSSSTTBCCSEEEECCSSHHHHH
T ss_pred hHHHHHHHHHHhhCCCcEEEEecccC----------------CcHHHHHHHhhhhcccccccCCCCCEEEECCcchhhhh
Confidence 99999999999999999999998654 1125555554 68999999999999999
Q ss_pred HHHHHHHhcCCeEEEee-e--CCceEEEEEcCCCCCcccccccchhccCccccccccCCCCCCCCCCcCceeecccCCCC
Q 005071 490 LPTLLCANTNKITITAA-L--GFDSFLVMRHGPGPFSITHDVKTEAVNGLSADMDNLGLNNRDGGQRLGCYFCNDVVAPT 566 (715)
Q Consensus 490 li~~~~~~~~kp~I~aa-l--G~~g~vv~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gCy~C~d~~aP~ 566 (715)
++|++|.++++|+|+++ . ++.|++.++. | ++++||+|.....|.
T Consensus 153 ~in~~c~~~~~Pli~~gv~~~~~~Gqv~~~~---p------------------------------g~t~Cy~Cl~p~~~~ 199 (292)
T 3h8v_A 153 TINTACNELGQTWMESGVSENAVSGHIQLII---P------------------------------GESACFACAPPLVVA 199 (292)
T ss_dssp HHHHHHHHHTCCEEEEEECTTSSEEEEEEEC---T------------------------------TTSCCTTSSSCCCCC
T ss_pred HHHHHHHHhCCCEEEeeeecceeEEEEEEEC---C------------------------------CCCCCHhhcCCcccc
Confidence 99999999999999875 3 4899998764 3 357899999443332
Q ss_pred CCCcccccc--cccc-ccCcchHHHHHHHHHHHHHHHhcCCCCCCCCccccCCCCCCCCCCCCCceeEEEecCCCCeeeE
Q 005071 567 DSTANRTLD--QQCT-VTRPGLAPIASALAVELFVGVLHHPKGIYAGAEFANSIDSGSSEQPLGILPHQIRGSLSQFSQM 643 (715)
Q Consensus 567 ~s~~drtLd--q~Ct-V~~Pgv~~ias~~A~Ell~~ll~hp~g~~a~~~~~~~~~~~~~~~~Lg~~p~~irg~~~~f~~~ 643 (715)
......+.+ ..|+ +++|.+++||++||.|+||.|+ |.+. + ++++.+|++.++|+++
T Consensus 200 ~~~~~~~~~~~gvc~~~l~~~~g~vgslqA~EalK~L~----g~g~---------------~--~~ll~~D~~~~~~~~~ 258 (292)
T 3h8v_A 200 ANIDEKTLKREGVCAASLPTTMGVVAGILVQNVLKFLL----NFGT---------------V--SFYLGYNAMQDFFPTM 258 (292)
T ss_dssp CC-------CHHHHHHHHHHHHHHHHHHHHHHHHHHHH----TCSC---------------C--CSEEEEETTTTBCCEE
T ss_pred ccccccchhhcCcccCCcchHHHHHHHHHHHHHHHHHh----CCCC---------------C--CeEEEEECCCCcEEEE
Confidence 221112211 1242 4889999999999999999999 6653 2 4889999999999999
Q ss_pred EecCCCCCCCC--CCChh
Q 005071 644 TLVGHSSNSCT--ACCST 659 (715)
Q Consensus 644 ~l~~~~~~~C~--aCs~~ 659 (715)
++. ++|+|+ +|+..
T Consensus 259 ~~~--~~p~C~~~~Cg~~ 274 (292)
T 3h8v_A 259 SMK--PNPQCDDRNCRKQ 274 (292)
T ss_dssp CCC--CCTTCSCHHHHHH
T ss_pred ecC--CCcCcCccccCCc
Confidence 998 899999 99973
No 8
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=100.00 E-value=5.6e-42 Score=354.50 Aligned_cols=234 Identities=26% Similarity=0.367 Sum_probs=201.3
Q ss_pred hhhhhhhhcCCchh---HHhhccCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeCCcccccCCCcCCCCCcchhcCCCCc
Q 005071 345 NLKLMRWRQLPSLN---LDILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDF 421 (715)
Q Consensus 345 nlry~R~rllp~~g---q~kL~~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~~ 421 (715)
..||.||+.+|++| |++|+++||+|+|+||+|+++|++|+++|||+|+|+|+|.|+.+||+||++|+.+|+ |++
T Consensus 6 ~~ry~Rq~~l~~~g~~~q~~l~~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~di---G~~ 82 (251)
T 1zud_1 6 FMRYSRQILLDDIALDGQQKLLDSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDI---DRP 82 (251)
T ss_dssp HHHTHHHHTSTTTHHHHHHHHHTCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGT---TSB
T ss_pred HHHhhhhcchhhcCHHHHHHHhcCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhC---CCH
Confidence 36999999887665 899999999999999999999999999999999999999999999999999999999 999
Q ss_pred HHHHHHHHHHhhCCCcEEEEEecccCCCCCCCCCccccccccchhhHHHhhccCCEEEEeCCChHHHHHHHHHHHhcCCe
Q 005071 422 KAMAAVKSLERIFPAVAAEGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTRESRWLPTLLCANTNKI 501 (715)
Q Consensus 422 KAeaaa~~L~~inP~v~v~~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~esR~li~~~~~~~~kp 501 (715)
||++++++|+++||+++++.+...+ +.+++.++++++|+||+|+|+.++|++++++|+++++|
T Consensus 83 Ka~~~~~~l~~~np~~~v~~~~~~~-----------------~~~~~~~~~~~~DvVi~~~d~~~~r~~l~~~~~~~~~p 145 (251)
T 1zud_1 83 KSQVSQQRLTQLNPDIQLTALQQRL-----------------TGEALKDAVARADVVLDCTDNMATRQEINAACVALNTP 145 (251)
T ss_dssp HHHHHHHHHHHHCTTSEEEEECSCC-----------------CHHHHHHHHHHCSEEEECCSSHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHCCCCEEEEEeccC-----------------CHHHHHHHHhcCCEEEECCCCHHHHHHHHHHHHHhCCC
Confidence 9999999999999999999987543 56788889999999999999999999999999999999
Q ss_pred EEEe-eeCCceEEEEEcCCCCCcccccccchhccCccccccccCCCCCCCCCCcCceeecccCCCCCCCcccccccccc-
Q 005071 502 TITA-ALGFDSFLVMRHGPGPFSITHDVKTEAVNGLSADMDNLGLNNRDGGQRLGCYFCNDVVAPTDSTANRTLDQQCT- 579 (715)
Q Consensus 502 ~I~a-alG~~g~vv~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gCy~C~d~~aP~~s~~drtLdq~Ct- 579 (715)
+|++ +.|+.|+++++. | ....+||+|.....|.. .+.|.
T Consensus 146 ~i~~~~~g~~G~v~~~~---p-----------------------------~~~~~c~~cl~~~~~~~-------~~~~~~ 186 (251)
T 1zud_1 146 LITASAVGFGGQLMVLT---P-----------------------------PWEQGCYRCLWPDNQEP-------ERNCRT 186 (251)
T ss_dssp EEEEEEEBTEEEEEEEC---T-----------------------------TCTTCCHHHHCC------------------
T ss_pred EEEEeccccceEEEEEc---c-----------------------------CCCCCcEEEeCCCCCCC-------CCcccc
Confidence 9997 589999998764 2 11368999984332221 13454
Q ss_pred --ccCcchHHHHHHHHHHHHHHHhcCCCCCCCCccccCCCCCCCCCCCCCceeEEEecCCCCeeeEEecCCCCCCCCCCC
Q 005071 580 --VTRPGLAPIASALAVELFVGVLHHPKGIYAGAEFANSIDSGSSEQPLGILPHQIRGSLSQFSQMTLVGHSSNSCTACC 657 (715)
Q Consensus 580 --V~~Pgv~~ias~~A~Ell~~ll~hp~g~~a~~~~~~~~~~~~~~~~Lg~~p~~irg~~~~f~~~~l~~~~~~~C~aCs 657 (715)
+++|.++++|+++|.|+|+.|+ |.+. ++ +..+.+|+..+.|+.+.+. ++++|++|+
T Consensus 187 ~g~~~p~~~~~g~~~A~e~lk~l~----g~~~---------------~~-~~~~~~d~~~~~~~~~~~~--~~p~C~~C~ 244 (251)
T 1zud_1 187 AGVVGPVVGVMGTLQALEAIKLLS----GIET---------------PA-GELRLFDGKSSQWRSLALR--RASGCPVCG 244 (251)
T ss_dssp CCBCHHHHHHHHHHHHHHHHHHHH----TCCC---------------CC-SEEEEEETTTTEEEEEECC--CCTTCTTTC
T ss_pred CCchHHHHHHHHHHHHHHHHHHHh----CCCC---------------cC-CcEEEEECCCCEEEEEecC--CCcCCCccC
Confidence 7899999999999999999999 5432 23 5788999999999999888 899999999
Q ss_pred hh
Q 005071 658 ST 659 (715)
Q Consensus 658 ~~ 659 (715)
..
T Consensus 245 ~~ 246 (251)
T 1zud_1 245 GS 246 (251)
T ss_dssp C-
T ss_pred CC
Confidence 74
No 9
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=100.00 E-value=4.7e-41 Score=347.09 Aligned_cols=233 Identities=26% Similarity=0.345 Sum_probs=201.3
Q ss_pred hhhhhhhcCCchh---HHhhccCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeCCcccccCCCcCCCCCcchhcCCCCcH
Q 005071 346 LKLMRWRQLPSLN---LDILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFK 422 (715)
Q Consensus 346 lry~R~rllp~~g---q~kL~~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~~K 422 (715)
.||+||+.+|++| |++|+++||+|+|+||+|+++|++|+++||++|+|+|.|.|+.+||+||++|+.+|+ |++|
T Consensus 10 ~ry~Rq~~l~~~g~~~q~~l~~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~di---G~~K 86 (249)
T 1jw9_B 10 LRYNRQIILRGFDFDGQEALKDSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATV---GQPK 86 (249)
T ss_dssp HHTHHHHTSTTTHHHHHHHHHHCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGT---TSBH
T ss_pred HHhhheecccccCHHHHHHHhCCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhc---CcHH
Confidence 6899999887765 899999999999999999999999999999999999999999999999999999999 9999
Q ss_pred HHHHHHHHHhhCCCcEEEEEecccCCCCCCCCCccccccccchhhHHHhhccCCEEEEeCCChHHHHHHHHHHHhcCCeE
Q 005071 423 AMAAVKSLERIFPAVAAEGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTRESRWLPTLLCANTNKIT 502 (715)
Q Consensus 423 Aeaaa~~L~~inP~v~v~~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~esR~li~~~~~~~~kp~ 502 (715)
+++++++|+++||+++++.+...+ +.+++.++++++|+||+|+|+.++|++++++|++.++|+
T Consensus 87 a~~~~~~l~~~np~~~v~~~~~~~-----------------~~~~~~~~~~~~DvVi~~~d~~~~~~~l~~~~~~~~~p~ 149 (249)
T 1jw9_B 87 VESARDALTRINPHIAITPVNALL-----------------DDAELAALIAEHDLVLDCTDNVAVRNQLNAGCFAAKVPL 149 (249)
T ss_dssp HHHHHHHHHHHCTTSEEEEECSCC-----------------CHHHHHHHHHTSSEEEECCSSHHHHHHHHHHHHHHTCCE
T ss_pred HHHHHHHHHHHCCCcEEEEEeccC-----------------CHhHHHHHHhCCCEEEEeCCCHHHHHHHHHHHHHcCCCE
Confidence 999999999999999999987543 456778889999999999999999999999999999999
Q ss_pred EEe-eeCCceEEEEEcCCCCCcccccccchhccCccccccccCCCCCCCCCCcCceeecccCCCCCCCcccccccccc--
Q 005071 503 ITA-ALGFDSFLVMRHGPGPFSITHDVKTEAVNGLSADMDNLGLNNRDGGQRLGCYFCNDVVAPTDSTANRTLDQQCT-- 579 (715)
Q Consensus 503 I~a-alG~~g~vv~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gCy~C~d~~aP~~s~~drtLdq~Ct-- 579 (715)
|++ +.|+.|++.++. | +...+||+|.. |..... .+.|.
T Consensus 150 i~~~~~g~~g~v~~~~---p-----------------------------~~~~~c~~c~~---~~~~~~----~~~c~~~ 190 (249)
T 1jw9_B 150 VSGAAIRMEGQITVFT---Y-----------------------------QDGEPCYRCLS---RLFGEN----ALTCVEA 190 (249)
T ss_dssp EEEEEEBTEEEEEEEC---C-----------------------------CTTCCCTHHHH---TTCCC-----------C
T ss_pred EEeeeccceEEEEEEe---C-----------------------------CCCCCceEEEC---CCCCcc----ccccccc
Confidence 997 589999998764 2 11368999984 332211 23564
Q ss_pred -ccCcchHHHHHHHHHHHHHHHhcCCCCCCCCccccCCCCCCCCCCCCCceeEEEecCCCCeeeEEecCCCCCCCCCCCh
Q 005071 580 -VTRPGLAPIASALAVELFVGVLHHPKGIYAGAEFANSIDSGSSEQPLGILPHQIRGSLSQFSQMTLVGHSSNSCTACCS 658 (715)
Q Consensus 580 -V~~Pgv~~ias~~A~Ell~~ll~hp~g~~a~~~~~~~~~~~~~~~~Lg~~p~~irg~~~~f~~~~l~~~~~~~C~aCs~ 658 (715)
+++|.++++|+++|.|+|+.|+ |.+. ++.+..+.+++..+.|+.+.+. +.++|++|+.
T Consensus 191 g~~~~~~~~~g~~~a~e~lk~l~----g~~~---------------~~~~~~~~~d~~~~~~~~~~~~--~~~~C~~C~~ 249 (249)
T 1jw9_B 191 GVMAPLIGVIGSLQAMEAIKMLA----GYGK---------------PASGKIVMYDAMTCQFREMKLM--RNPGCEVCGQ 249 (249)
T ss_dssp CBCHHHHHHHHHHHHHHHHHHHH----TCSC---------------CCBSEEEEEETTTTEEEEEECC--CCTTCTTTC-
T ss_pred CCcchHHHHHHHHHHHHHHHHHh----CCCC---------------CccCeEEEEECCCCEEEEEecC--CCcCCCCcCc
Confidence 8999999999999999999999 5442 3456889999999999999987 8999999984
No 10
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=100.00 E-value=6.9e-41 Score=362.48 Aligned_cols=242 Identities=20% Similarity=0.226 Sum_probs=197.4
Q ss_pred hhhhhhhhcC---Cch---h-HHhhccCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeCCcccccCCCcCCCCCcchhcC
Q 005071 345 NLKLMRWRQL---PSL---N-LDILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLN 417 (715)
Q Consensus 345 nlry~R~rll---p~~---g-q~kL~~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~ 417 (715)
..||+||+++ +++ + |++|+++||+|||+||+||++|++|+++|||+|+|+|+|.|+.||++||++|+.+|+
T Consensus 92 ~~rY~Rq~~~~~~~g~~~~~~q~~L~~~~VlvvG~GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~di-- 169 (353)
T 3h5n_A 92 NNRYSRNFLHYQSYGANPVLVQDKLKNAKVVILGCGGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDV-- 169 (353)
T ss_dssp TSTTHHHHHHHHHTTCCHHHHHHHHHTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEECCBCCGGGGGTCTTCCGGGT--
T ss_pred HHHhhhhhhhhhccCCChHHHHHHHhCCeEEEECCCHHHHHHHHHHHhCCCCeEEEECCCcCcccccccccCCChHHC--
Confidence 5799999753 222 3 999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcHHHHHHHHHHhhCCCcEEEEEecccCCCCCCCCCccccccccchhh-HHHhhccCCEEEEeCCChH-HHHHHHHHH
Q 005071 418 GGDFKAMAAVKSLERIFPAVAAEGVVMAIPMPGHPVPCQEEDSVLDDCRR-LTDLILSHDVIFLLTDTRE-SRWLPTLLC 495 (715)
Q Consensus 418 ~G~~KAeaaa~~L~~inP~v~v~~~~~~Ipmpgh~~~~~~~~~~~~~~~~-l~~li~~~DvV~~~tDs~e-sR~li~~~~ 495 (715)
|++||++++++|+++||+++++.+...+ +.++ +.+ ++++|+||+|+|+++ +|++++++|
T Consensus 170 -G~~Ka~~~~~~l~~~np~v~v~~~~~~i-----------------~~~~~~~~-~~~~DlVvd~~Dn~~~~r~~ln~~c 230 (353)
T 3h5n_A 170 -GKNKTEVIKRELLKRNSEISVSEIALNI-----------------NDYTDLHK-VPEADIWVVSADHPFNLINWVNKYC 230 (353)
T ss_dssp -TSBHHHHHHHHHHHHCTTSEEEEEECCC-----------------CSGGGGGG-SCCCSEEEECCCCSTTHHHHHHHHH
T ss_pred -CChHHHHHHHHHHHHCCCCeEEEeeccc-----------------CchhhhhH-hccCCEEEEecCChHHHHHHHHHHH
Confidence 9999999999999999999999998654 3333 555 899999999999999 999999999
Q ss_pred HhcCCeEEEe-eeCCceEEEEEcCCCCCcccccccchhccCccccccccCCCCCCCCCCcCceeecccCCCCCCCccccc
Q 005071 496 ANTNKITITA-ALGFDSFLVMRHGPGPFSITHDVKTEAVNGLSADMDNLGLNNRDGGQRLGCYFCNDVVAPTDSTANRTL 574 (715)
Q Consensus 496 ~~~~kp~I~a-alG~~g~vv~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gCy~C~d~~aP~~s~~drtL 574 (715)
+++++|+|++ ..|+.|++..+. .| ++++||+|.+...+.....++..
T Consensus 231 ~~~~~p~i~~~~~g~~g~~g~~~--~p------------------------------~~~~C~~C~~~~~~~~~~~~~~~ 278 (353)
T 3h5n_A 231 VRANQPYINAGYVNDIAVFGPLY--VP------------------------------GKTGCYECQKVVADLYGSEKENI 278 (353)
T ss_dssp HHTTCCEEEEEEETTEEEEEEEE--CT------------------------------TTSCCTTTTC---------CHHH
T ss_pred HHhCCCEEEEEEeCCEEEEEEEE--cC------------------------------CCCCChhhcCCCcCCCccccchh
Confidence 9999999997 478888764321 02 46799999965321111111112
Q ss_pred cccc---------cccCcchHHHHHHHHHHHHHHHhcCCCCCCCCccccCCCCCCCCCCCCCceeEEEecCCCCeeeEEe
Q 005071 575 DQQC---------TVTRPGLAPIASALAVELFVGVLHHPKGIYAGAEFANSIDSGSSEQPLGILPHQIRGSLSQFSQMTL 645 (715)
Q Consensus 575 dq~C---------tV~~Pgv~~ias~~A~Ell~~ll~hp~g~~a~~~~~~~~~~~~~~~~Lg~~p~~irg~~~~f~~~~l 645 (715)
++.| .|.+|.++++|++||.|++|.|+ |.+.| .+.++.+.+++..++|+.+.+
T Consensus 279 ~~~c~~~~~~~~~gv~~~~~~iig~l~a~Ealk~l~----g~~~~--------------~~~g~l~~~d~~~~~~~~~~~ 340 (353)
T 3h5n_A 279 DHKIKLINSRFKPATFAPVNNVAAALCAADVIKFIG----KYSEP--------------LSLNKRIGIWSDEIKIHSQNM 340 (353)
T ss_dssp HHHHHHHHHTCCCCCCHHHHHHHHHHHHHHHHHHHH----CSSCC--------------TTBTEEEEECSSSSCEEEEEC
T ss_pred hhhhhhhcccccCCchhhHHHHHHHHHHHHHHHHhc----CCCCc--------------ccCCeEEEEECCCCEEEEEcc
Confidence 2333 37899999999999999999999 65542 235788999999999999998
Q ss_pred cCCCCCCCCCCChh
Q 005071 646 VGHSSNSCTACCST 659 (715)
Q Consensus 646 ~~~~~~~C~aCs~~ 659 (715)
. +.|+|++||.+
T Consensus 341 ~--~~p~C~~Cg~~ 352 (353)
T 3h5n_A 341 G--RSPVCSVCGNR 352 (353)
T ss_dssp C--CCTTCTTTC--
T ss_pred C--CCcCCCCCCCC
Confidence 8 89999999974
No 11
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=100.00 E-value=4.7e-36 Score=332.48 Aligned_cols=224 Identities=23% Similarity=0.256 Sum_probs=182.1
Q ss_pred HhhccCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeCCcccccCCCcCCCCCcchhcCCCCcHHHHHHHHHHhhCCCcEE
Q 005071 360 DILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAA 439 (715)
Q Consensus 360 ~kL~~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~~KAeaaa~~L~~inP~v~v 439 (715)
.+|+++||+||||||+||++|++|+++|||+|+|+|+|+|+.|||+||+||+.+|+ |++||++|+++|+++||++++
T Consensus 36 ~~L~~~~VlvvG~GGlGs~va~~La~aGvg~i~ivD~D~Ve~sNL~RQ~l~~~~di---G~~Ka~~a~~~l~~lnp~v~v 112 (434)
T 1tt5_B 36 FLLDTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDI---GRPKAEVAAEFLNDRVPNCNV 112 (434)
T ss_dssp HHHHTCCEEEECSSTHHHHHHHHHHHTTCCCEEEEECCBCCGGGTTTCTTCCGGGT---TSBHHHHHHHHHHHHSTTCCC
T ss_pred HHhcCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEcCCEechhccCCCcCCChhHc---CcHHHHHHHHHHHhhCCCCEE
Confidence 56799999999999999999999999999999999999999999999999999999 999999999999999999999
Q ss_pred EEEecccCCCCCCCCCccccccccchhhHHHhhccCCEEEEeCCChHHHHHHHHHHHhc------------CCeEEEe-e
Q 005071 440 EGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTRESRWLPTLLCANT------------NKITITA-A 506 (715)
Q Consensus 440 ~~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~esR~li~~~~~~~------------~kp~I~a-a 506 (715)
+.+...+ +..+ .++++++|+||+|+||.++|+++|++|.++ ++|+|++ .
T Consensus 113 ~~~~~~i-----------------~~~~-~~~~~~~DlVi~~~Dn~~~R~~in~~c~~~~~~~~g~~~~~~~iPli~~~~ 174 (434)
T 1tt5_B 113 VPHFNKI-----------------QDFN-DTFYRQFHIIVCGLDSIIARRWINGMLISLLNYEDGVLDPSSIVPLIDGGT 174 (434)
T ss_dssp EEEESCG-----------------GGBC-HHHHTTCSEEEECCSCHHHHHHHHHHHHHTCCBSSSCBCGGGCCCEEEEEE
T ss_pred EEEeccc-----------------chhh-HHHhcCCCEEEECCCCHHHHHHHHHHHHHhhhccccccccccCCcEEEecc
Confidence 9998654 2223 478899999999999999999999999984 9999987 5
Q ss_pred eCCceEEEEEcCCCCCcccccccchhccCccccccccCCCCCCCCCCcCceeecccCCCCCCC-ccc-------------
Q 005071 507 LGFDSFLVMRHGPGPFSITHDVKTEAVNGLSADMDNLGLNNRDGGQRLGCYFCNDVVAPTDST-ANR------------- 572 (715)
Q Consensus 507 lG~~g~vv~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gCy~C~d~~aP~~s~-~dr------------- 572 (715)
.|+.|++.++. | +.++||+|.....|.... +.+
T Consensus 175 ~g~~G~v~v~~---p------------------------------~~t~Cy~C~~~~~p~~~~~p~Ct~~~~p~~~~h~i 221 (434)
T 1tt5_B 175 EGFKGNARVIL---P------------------------------GMTACIECTLELYPPQVNFPMCTIASMPRLPEHCI 221 (434)
T ss_dssp ETTEEEEEEEC---T------------------------------TTSCCGGGGGGGSCCCCCCCHHHHHHCCCSHHHHH
T ss_pred ccceeEEEEEC---C------------------------------CCCCCcccccCCCCCcCCCcccccccCCcchhHHH
Confidence 89999998774 2 346899998654443211 100
Q ss_pred ------------------cccc---------------ccc---------------------ccCcchHHHHHHHHHHHHH
Q 005071 573 ------------------TLDQ---------------QCT---------------------VTRPGLAPIASALAVELFV 598 (715)
Q Consensus 573 ------------------tLdq---------------~Ct---------------------V~~Pgv~~ias~~A~Ell~ 598 (715)
++|. .|. .+.|.+|+||+++|.|++|
T Consensus 222 ~~a~~i~~~~~~~~~~~~~~d~d~~~~~~~v~~~a~~~~~~~gi~~~~~~~~~gv~~~iipaia~t~aiig~l~a~EaiK 301 (434)
T 1tt5_B 222 EYVRMLQWPKEQPFGEGVPLDGDDPEHIQWIFQKSLERASQYNIRGVTYRLTQGVVKRIIPAVASTNAVIAAVCATEVFK 301 (434)
T ss_dssp HHHHHTHHHHSCTTCTTCCCCTTCHHHHHHHHHHHHHHHHHTTCCCCCHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhcccccccccCCCcHHHHHHHHHHHHHHHHHcCCCccCHHHHHhHhhccCcccccHHHHHHHHHHHHHHH
Confidence 1110 011 1256778999999999999
Q ss_pred HHhcCCCCCCCCccccCCCCCCCCCCCCCceeEEEecCCCC-eeeEEecCCCCCCCCCCChh
Q 005071 599 GVLHHPKGIYAGAEFANSIDSGSSEQPLGILPHQIRGSLSQ-FSQMTLVGHSSNSCTACCST 659 (715)
Q Consensus 599 ~ll~hp~g~~a~~~~~~~~~~~~~~~~Lg~~p~~irg~~~~-f~~~~l~~~~~~~C~aCs~~ 659 (715)
.|+ |.+. ++.+. +.+++..+. ++++.+. ++++|++||..
T Consensus 302 ~l~----g~~~---------------~l~~~-l~~d~~~~~~~~~~~~~--~~~~C~vC~~~ 341 (434)
T 1tt5_B 302 IAT----SAYI---------------PLNNY-LVFNDVDGLYTYTFEAE--RKENCPACSQL 341 (434)
T ss_dssp HHH----TCSC---------------CCCSE-EEEECSBSCEEEEECCC--CCTTCTTTCSS
T ss_pred HHh----CCCc---------------ccCce-EEEEcCCCceeEEEecc--CCCCCCccCCC
Confidence 999 5543 34443 578888877 4566654 89999999973
No 12
>2nvu_B Maltose binding protein/NEDD8-activating enzyme E1 catalytic subunit chimera; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: c.111.1.2 c.94.1.1
Probab=100.00 E-value=4.5e-34 Score=338.11 Aligned_cols=225 Identities=23% Similarity=0.264 Sum_probs=182.5
Q ss_pred HHhh-ccCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeCCcccccCCCcCCCCCcchhcCCCCcHHHHHHHHHHhhCCCc
Q 005071 359 LDIL-SSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAV 437 (715)
Q Consensus 359 q~kL-~~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~~KAeaaa~~L~~inP~v 437 (715)
|+++ +++||+|||||||||++|++|+++|||+|+|||.|+|+.|||+||+||+.+|+ |++||++++++|+++||++
T Consensus 405 ~~~~l~~~~vlvvG~GglG~~~~~~L~~~Gvg~i~l~D~d~v~~snl~rq~~~~~~~v---g~~Ka~~~~~~l~~~np~~ 481 (805)
T 2nvu_B 405 LQFLLDTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDI---GRPKAEVAAEFLNDRVPNC 481 (805)
T ss_dssp HHHHHHTCCEEEECCSSHHHHHHHHHHTTTCCEEEEEECCBCCGGGGGTCTTCCGGGT---TSBHHHHHHHHHHHHSTTC
T ss_pred HHHHHhCCeEEEECCCHHHHHHHHHHHHcCCCcEEEECCCeecccccccccccchhhc---CChHHHHHHHHHHHHCCCC
Confidence 5665 99999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred EEEEEecccCCCCCCCCCccccccccchhhHHHhhccCCEEEEeCCChHHHHHHHHHHHhc------------CCeEEEe
Q 005071 438 AAEGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTRESRWLPTLLCANT------------NKITITA 505 (715)
Q Consensus 438 ~v~~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~esR~li~~~~~~~------------~kp~I~a 505 (715)
+|+.+...+ +..+ .++++++|+||+|+|+.++|+++|++|... ++|+|++
T Consensus 482 ~v~~~~~~~-----------------~~~~-~~~~~~~d~vv~~~d~~~~r~~in~~~~~~~~~~~g~~~~~~~~p~i~~ 543 (805)
T 2nvu_B 482 NVVPHFNKI-----------------QDFN-DTFYRQFHIIVCGLDSIIARRWINGMLISLLNYEDGVLDPSSIVPLIDG 543 (805)
T ss_dssp EEEEEESCG-----------------GGSC-HHHHHTCSEEEECCSCHHHHHHHHHHHHHTCCEETTEECGGGCCCEEEE
T ss_pred EEEEEeccc-----------------cccH-HHHHhcCCEEEECCCCHHHHHHHHHHHHHHhhccccccccccCCcEEEe
Confidence 999998654 2223 478899999999999999999999999984 9999987
Q ss_pred -eeCCceEEEEEcCCCCCcccccccchhccCccccccccCCCCCCCCCCcCceeecccCCCCCCC-ccc-----------
Q 005071 506 -ALGFDSFLVMRHGPGPFSITHDVKTEAVNGLSADMDNLGLNNRDGGQRLGCYFCNDVVAPTDST-ANR----------- 572 (715)
Q Consensus 506 -alG~~g~vv~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gCy~C~d~~aP~~s~-~dr----------- 572 (715)
..|+.|++.++. | +.++||+|.....|.... +.+
T Consensus 544 ~~~g~~G~~~~~~---p------------------------------~~~~c~~c~~~~~p~~~~~~~c~~~~~~~~~~~ 590 (805)
T 2nvu_B 544 GTEGFKGNARVIL---P------------------------------GMTACIECTLELYPPQVNFPMCTIASMPRLPEH 590 (805)
T ss_dssp EEETTEEEEEEEC---T------------------------------TTSCCTTTSGGGSCCCCCCCHHHHHHCCCSHHH
T ss_pred ccccCceeEEEEC---C------------------------------CCCCceeccCCCCCCCCCCCccccCCCCCCccH
Confidence 589999998875 3 346899998544443211 100
Q ss_pred --------------------cccc---------------cc---------------------cccCcchHHHHHHHHHHH
Q 005071 573 --------------------TLDQ---------------QC---------------------TVTRPGLAPIASALAVEL 596 (715)
Q Consensus 573 --------------------tLdq---------------~C---------------------tV~~Pgv~~ias~~A~El 596 (715)
++|. .| +.+.|.+|+||+++|.|+
T Consensus 591 ~i~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~i~p~i~~~~aiig~~~a~e~ 670 (805)
T 2nvu_B 591 CIEYVRMLQWPKEQPFGEGVPLDGDDPEHIQWIFQKSLERASQYNIRGVTYRLTQGVVKRIIPAVASTNAVIAAVCATEV 670 (805)
T ss_dssp HHHHHHHTHHHHHCTTSTTCCCCTTCHHHHHHHHHHHHHHHHHTTCCCCCHHHHHHHHHTCCCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhcccccCCCCcccCCCCCHHHHHHHHHHHHHHHHHhCCCCcCHHHHHHHhcccccccchHHHHHHHHHHHHH
Confidence 1110 01 112567789999999999
Q ss_pred HHHHhcCCCCCCCCccccCCCCCCCCCCCCCceeEEEecCCCC-eeeEEecCCCCCCCCCCChh
Q 005071 597 FVGVLHHPKGIYAGAEFANSIDSGSSEQPLGILPHQIRGSLSQ-FSQMTLVGHSSNSCTACCST 659 (715)
Q Consensus 597 l~~ll~hp~g~~a~~~~~~~~~~~~~~~~Lg~~p~~irg~~~~-f~~~~l~~~~~~~C~aCs~~ 659 (715)
||.|+ |.+. +|.+. +.+++..+. ++++.+. ++++|++|+..
T Consensus 671 ik~l~----~~~~---------------~l~~~-~~~~~~~~~~~~~~~~~--~~~~C~~C~~~ 712 (805)
T 2nvu_B 671 FKIAT----SAYI---------------PLNNY-LVFNDVDGLYTYTFEAE--RKENCPACSQL 712 (805)
T ss_dssp HHHHH----CSSC---------------CCCSE-EEEECSBSCEEEEECCC--CCTTCTTTSCC
T ss_pred HHHHh----cccc---------------ccCce-EEecCCCCcccccccCC--CCCCCCeeCce
Confidence 99999 5543 34443 578888877 4566555 89999999973
No 13
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=100.00 E-value=6.1e-32 Score=291.78 Aligned_cols=154 Identities=20% Similarity=0.273 Sum_probs=141.2
Q ss_pred hhhhhhhh-cCCchhHHhhccCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeCCcccccCCCcCCCCCcchhcCCCCcHH
Q 005071 345 NLKLMRWR-QLPSLNLDILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKA 423 (715)
Q Consensus 345 nlry~R~r-llp~~gq~kL~~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~~KA 423 (715)
..||+||+ +++..+|++|++++|+|+|+||+||++|++|+++|||+|+|+|+|.|+.+||+||++|+.+|+ |++||
T Consensus 16 ~~rY~Rq~~l~G~~~q~~L~~~~VlivG~GGlG~~ia~~La~~Gvg~itlvD~d~V~~sNL~rq~~~~~~di---G~~Ka 92 (346)
T 1y8q_A 16 AAQYDRQIRLWGLEAQKRLRASRVLLVGLKGLGAEIAKNLILAGVKGLTMLDHEQVTPEDPGAQFLIRTGSV---GRNRA 92 (346)
T ss_dssp HHHHHHHHHHHCHHHHHHHHTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBCCSSCGGGCTTSCSSCT---TSBHH
T ss_pred HHHHHHHHHhhCHHHHHHHhCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEECCCcchhhCCCCCccccccC---cCCHH
Confidence 46899996 556667999999999999999999999999999999999999999999999999999999999 99999
Q ss_pred HHHHHHHHhhCCCcEEEEEecccCCCCCCCCCccccccccchhhHHHhhccCCEEEEeCCChHHHHHHHHHHHhcCCeEE
Q 005071 424 MAAVKSLERIFPAVAAEGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTRESRWLPTLLCANTNKITI 503 (715)
Q Consensus 424 eaaa~~L~~inP~v~v~~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~esR~li~~~~~~~~kp~I 503 (715)
++++++|+++||+++++.+...+ +. +..++++++|+||+|+|+.++|++++.+|+++++|+|
T Consensus 93 ~~~~~~l~~lnp~v~v~~~~~~~-----------------~~-~~~~~~~~~dvVv~~~d~~~~r~~ln~~~~~~~ip~i 154 (346)
T 1y8q_A 93 EASLERAQNLNPMVDVKVDTEDI-----------------EK-KPESFFTQFDAVCLTCCSRDVIVKVDQICHKNSIKFF 154 (346)
T ss_dssp HHHHHHHHHTCTTSEEEEECSCG-----------------GG-CCHHHHTTCSEEEEESCCHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHhHCCCeEEEEEeccc-----------------Cc-chHHHhcCCCEEEEcCCCHHHHHHHHHHHHHcCCCEE
Confidence 99999999999999999987543 11 3467889999999999999999999999999999999
Q ss_pred Ee-eeCCceEEEEEcCC
Q 005071 504 TA-ALGFDSFLVMRHGP 519 (715)
Q Consensus 504 ~a-alG~~g~vv~~~g~ 519 (715)
.+ ..|+.|++++..|.
T Consensus 155 ~~~~~G~~G~v~~d~~~ 171 (346)
T 1y8q_A 155 TGDVFGYHGYTFANLGE 171 (346)
T ss_dssp EEEEEBTEEEEEEECSE
T ss_pred EEeecccEEEEEEecCC
Confidence 87 68999999887653
No 14
>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A
Probab=99.98 E-value=9.4e-32 Score=308.71 Aligned_cols=190 Identities=22% Similarity=0.307 Sum_probs=161.5
Q ss_pred cCCchhHHhhccCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeCCcccccCCCcCCCCCcchhcCCCCcHHHHHHHHHHh
Q 005071 353 QLPSLNLDILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLER 432 (715)
Q Consensus 353 llp~~gq~kL~~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~~KAeaaa~~L~~ 432 (715)
+++..+|++|+++||+|||||||||++|++|+++|||+|+|+|.|+|+.|||+||+||+.+|+ |++||++|+++|++
T Consensus 6 l~G~e~Q~kL~~s~VlVVGaGGLGsevak~La~aGVG~ItlvD~D~Ve~SNLnRQflf~~~dV---Gk~KAeaaa~~L~~ 82 (640)
T 1y8q_B 6 GLPRELAEAVAGGRVLVVGAGGIGCELLKNLVLTGFSHIDLIDLDTIDVSNLNRQFLFQKKHV---GRSKAQVAKESVLQ 82 (640)
T ss_dssp CCCHHHHHHHHHCEEEEECCSHHHHHHHHHHHHHTCCEEEEEECCBCCGGGGGTCTTCCGGGT---TSBHHHHHHHHHHT
T ss_pred hcCHHHHHHHhcCeEEEECcCHHHHHHHHHHHHcCCCeEEEecCCEEChhhcCCCcCCChhHc---ChHHHHHHHHHHHH
Confidence 567778999999999999999999999999999999999999999999999999999999999 99999999999999
Q ss_pred hCCCcEEEEEecccCCCCCCCCCccccccccchhh-HHHhhccCCEEEEeCCChHHHHHHHHHHHhcCCeEEEe-eeCCc
Q 005071 433 IFPAVAAEGVVMAIPMPGHPVPCQEEDSVLDDCRR-LTDLILSHDVIFLLTDTRESRWLPTLLCANTNKITITA-ALGFD 510 (715)
Q Consensus 433 inP~v~v~~~~~~Ipmpgh~~~~~~~~~~~~~~~~-l~~li~~~DvV~~~tDs~esR~li~~~~~~~~kp~I~a-alG~~ 510 (715)
+||+++|+++...+ +.++ ..++++++|+||+|+|+.++|++++++|+.+++|+|.+ ..|+.
T Consensus 83 iNP~v~V~a~~~~i-----------------~~~~~~~~~~~~~DlVvda~Dn~~aR~~ln~~c~~~~iPlI~~g~~G~~ 145 (640)
T 1y8q_B 83 FYPKANIVAYHDSI-----------------MNPDYNVEFFRQFILVMNALDNRAARNHVNRMCLAADVPLIESGTAGYL 145 (640)
T ss_dssp TCTTCEEEEEESCT-----------------TSTTSCHHHHTTCSEEEECCSCHHHHHHHHHHHHHHTCCEEEEEEETTE
T ss_pred HCCCCeEEEEeccc-----------------chhhhhHhhhcCCCEEEECCCCHHHHHHHHHHHHHcCCCEEEEEEeccc
Confidence 99999999998654 1111 24678999999999999999999999999999999987 58999
Q ss_pred eEEEEEcCCCCCcccccccchhccCccccccccCCCCCCCCCCcCceeecccCCCCCCCccccccccccc---cCcchHH
Q 005071 511 SFLVMRHGPGPFSITHDVKTEAVNGLSADMDNLGLNNRDGGQRLGCYFCNDVVAPTDSTANRTLDQQCTV---TRPGLAP 587 (715)
Q Consensus 511 g~vv~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gCy~C~d~~aP~~s~~drtLdq~CtV---~~Pgv~~ 587 (715)
|++.++. | +.++||+|.. .|... --+.||+ .++.+.+
T Consensus 146 G~v~vi~---p------------------------------~~t~Cy~C~~--~p~~~-----~~p~Cti~~~p~~~~hc 185 (640)
T 1y8q_B 146 GQVTTIK---K------------------------------GVTECYECHP--KPTQR-----TFPGATIRNTPSEPIHC 185 (640)
T ss_dssp EEEEEEC---T------------------------------TTSCCTTSSC--CCCCC-----CCCTTTTTSCCCSHHHH
T ss_pred ceEEEEC---C------------------------------CCCCCcccCC--CCCCc-----ccceeeecCCCCchHHH
Confidence 9998764 2 3578999974 22111 1258984 3344555
Q ss_pred HHHHHHHHHHHHHhcCC
Q 005071 588 IASALAVELFVGVLHHP 604 (715)
Q Consensus 588 ias~~A~Ell~~ll~hp 604 (715)
|+ .|.|+++.|..++
T Consensus 186 i~--~a~~~f~~lf~~~ 200 (640)
T 1y8q_B 186 IV--WAKYLFNQLFGEE 200 (640)
T ss_dssp HH--HHHHHHHHHHSCC
T ss_pred HH--HHHHHHHHHhCCc
Confidence 55 7889999999543
No 15
>1tt5_A APPBP1, amyloid protein-binding protein 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbh_A 3dbl_A 3dbr_A 1r4m_A 1r4n_A* 2nvu_A* 1yov_A 3gzn_A*
Probab=99.97 E-value=1.6e-32 Score=311.16 Aligned_cols=214 Identities=13% Similarity=0.067 Sum_probs=173.3
Q ss_pred hhhhhhhhhhhcC-CchhHHhhccCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeCCcccccCCCcCCCCCcchhcCCCC
Q 005071 342 ADLNLKLMRWRQL-PSLNLDILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGD 420 (715)
Q Consensus 342 ~dlnlry~R~rll-p~~gq~kL~~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~ 420 (715)
.+.+.||+||+.+ +..+|++|+++||+|||||||||++|++|+++|||+|+|+|.|+|+.+||+||++|+.+|+ |+
T Consensus 9 id~~~rY~Rqi~l~G~~~q~~L~~~~VlvvG~GGlGseiak~La~aGVg~itlvD~D~Ve~sNL~RQ~l~~~~dv---G~ 85 (531)
T 1tt5_A 9 LLKEQKYDRQLRLWGDHGQEALESAHVCLINATATGTEILKNLVLPGIGSFTIIDGNQVSGEDAGNNFFLQRSSI---GK 85 (531)
T ss_dssp HHHHHHTHHHHHHHHHHHHHHHHHCEEEEECCSHHHHHHHHHHHTTTCSEEEEECCCBBCHHHHHHCTTCCGGGB---TS
T ss_pred ccHHHHhhHHHHhcCHHHHHHHhcCeEEEECcCHHHHHHHHHHHHcCCCeEEEEeCCEechhhcccCccCChhhc---Cc
Confidence 3445799999754 4456999999999999999999999999999999999999999999999999999999999 99
Q ss_pred cHHHHHHHHHHhhCCCcEEEEEecccCCCCCCCCCccccccccchhhHHHhhccCCEEEEeCCChHHHHHHHHHHHhcCC
Q 005071 421 FKAMAAVKSLERIFPAVAAEGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTRESRWLPTLLCANTNK 500 (715)
Q Consensus 421 ~KAeaaa~~L~~inP~v~v~~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~esR~li~~~~~~~~k 500 (715)
+||++++++|+++||+++++.+...+ ....++..++++++|+||+|+|+.++|++++++|+.+++
T Consensus 86 ~Ka~~a~~~l~~lNp~v~v~~~~~~~---------------~~~~~~~~~~~~~~DvVi~~~d~~~~r~~ln~~c~~~~i 150 (531)
T 1tt5_A 86 NRAEAAMEFLQELNSDVSGSFVEESP---------------ENLLDNDPSFFCRFTVVVATQLPESTSLRLADVLWNSQI 150 (531)
T ss_dssp BHHHHHHHHHHTTCTTSBCCEESSCH---------------HHHHHSCGGGGGGCSEEEEESCCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHhCCCCeEEEeCCCc---------------chhhhhhHHHhcCCCEEEEeCCCHHHHHHHHHHHHHcCC
Confidence 99999999999999999999987433 000134467889999999999999999999999999999
Q ss_pred eEEEe-eeCCceEEEEEcCCCCCcccccccchhccCccccccccCCCCCCCCCCcCceeecccCCCCCCCccccccccc-
Q 005071 501 ITITA-ALGFDSFLVMRHGPGPFSITHDVKTEAVNGLSADMDNLGLNNRDGGQRLGCYFCNDVVAPTDSTANRTLDQQC- 578 (715)
Q Consensus 501 p~I~a-alG~~g~vv~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gCy~C~d~~aP~~s~~drtLdq~C- 578 (715)
|+|.+ ..|+.|++.+..+.... + +..+....+||+|. .|....+.- -..|
T Consensus 151 plI~~~~~G~~G~v~~~~p~~~~--------------------~---d~~~~~~~~~lr~~---~p~P~~~~~--~~~~~ 202 (531)
T 1tt5_A 151 PLLICRTYGLVGYMRIIIKEHPV--------------------I---ESHPDNALEDLRLD---KPFPELREH--FQSYD 202 (531)
T ss_dssp CEEEEEEETTEEEEEEECSCEEE--------------------S---CCCCSSCCCCCCSS---SCCHHHHHH--HHTCC
T ss_pred CEEEEEecCCeEEEEEEcCCcee--------------------c---cCCCCCCCCccccc---CCCCCchhh--hhccC
Confidence 99987 58999999988742110 0 00122457899999 443322110 0123
Q ss_pred ------cccCcchHHHHHHHHHHHHHHHh
Q 005071 579 ------TVTRPGLAPIASALAVELFVGVL 601 (715)
Q Consensus 579 ------tV~~Pgv~~ias~~A~Ell~~ll 601 (715)
.+.++.++++++.+|.|.+|.+.
T Consensus 203 ~~~~~~~~~~~~p~vv~~~~ale~~k~~~ 231 (531)
T 1tt5_A 203 LDHMEKKDHSHTPWIVIIAKYLAQWYSET 231 (531)
T ss_dssp -------CGGGSCHHHHHHHHHHHHTTTT
T ss_pred cccccCCCcCCchHHHHHHHHHHHHHHhc
Confidence 36688999999999999998665
No 16
>3cmm_A Ubiquitin-activating enzyme E1 1; UBA1, protein turnover, ligase, conformationa thioester, adenylation, transthioesterification, ATP-bindin nucleotide-binding; 2.70A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.3e-31 Score=321.78 Aligned_cols=233 Identities=19% Similarity=0.224 Sum_probs=186.9
Q ss_pred ccccEEe--c-CCcccce----EecccCCCCh---hhhhhh-hhhhhhhhhhhhcC-CchhHHhhccCeEEEEcCChHHH
Q 005071 310 NTVGWEL--N-KGRKVPR----CISLAKSMDP---TRLAIS-AADLNLKLMRWRQL-PSLNLDILSSRKCLLLGAGTLGC 377 (715)
Q Consensus 310 ~~~gwe~--~-~gkl~pr----~~dl~~~~dp---~~la~~-a~dlnlry~R~rll-p~~gq~kL~~~kVlIvGaGgLGs 377 (715)
+++++|- . +||..|. ++|--.+... ..+.+. ...++.||.||+.+ +..+|++|+++||+|||||||||
T Consensus 359 GivAQEVIKaiT~kf~Pi~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~Ry~rq~~l~G~~~q~kL~~~~VlvVGaGGlGs 438 (1015)
T 3cmm_A 359 GLVAQEVLKACSGKFTPLKQFMYFDSLESLPDPKNFPRNEKTTQPVNSRYDNQIAVFGLDFQKKIANSKVFLVGSGAIGC 438 (1015)
T ss_dssp HHHHHHHHHHHHCBSCCCCSEEEEECGGGSCCTTTSCCSTTTTSCCSSTTHHHHHHHCHHHHHHHHTCEEEEECCSHHHH
T ss_pred chHHHHHHHHhccCCCcccceEEecchhhccccccCCCChhhccchhhhhhhHHHhcCHHHHHHHhcCeEEEEecCHHHH
Confidence 4566663 3 8999996 4554433321 111111 12246899999744 55679999999999999999999
Q ss_pred HHHHHHHHhcC-----CeEEEEeCCcccccCCCcCCCCCcchhcCCCCcHHHHHHHHHHhhCCCc--EEEEEecccCCCC
Q 005071 378 QVARMLMAWGV-----RKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAV--AAEGVVMAIPMPG 450 (715)
Q Consensus 378 ~VA~~La~~GV-----g~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~~KAeaaa~~L~~inP~v--~v~~~~~~Ipmpg 450 (715)
+++++|+++|| |+|+|||.|+|+.|||+||+||+.+|+ |++||++|+++|+++||++ +|+++...|
T Consensus 439 evlk~La~~Gv~~g~~G~i~lvD~D~Ve~SNLnRQ~lf~~~dv---G~~Ka~~aa~~l~~iNP~v~~~v~~~~~~i---- 511 (1015)
T 3cmm_A 439 EMLKNWALLGLGSGSDGYIVVTDNDSIEKSNLNRQFLFRPKDV---GKNKSEVAAEAVCAMNPDLKGKINAKIDKV---- 511 (1015)
T ss_dssp HHHHHHHHHTTTCSTTCEEEEECCCBCCGGGTTTCTTCCGGGT---TSBHHHHHHHHHHHHCGGGTTTEEEECCCC----
T ss_pred HHHHHHHHcCcCcCCCCeEEEEeCCEeccccccccccCChhhC---CCHHHHHHHHHHHHHCCCCcceEEEEeccc----
Confidence 99999999999 999999999999999999999999999 9999999999999999999 999998765
Q ss_pred CCCCCccccccccchhhH----HHhhccCCEEEEeCCChHHHHHHHHHHHhcCCeEEEe-eeCCceEEEEEcCCCCCccc
Q 005071 451 HPVPCQEEDSVLDDCRRL----TDLILSHDVIFLLTDTRESRWLPTLLCANTNKITITA-ALGFDSFLVMRHGPGPFSIT 525 (715)
Q Consensus 451 h~~~~~~~~~~~~~~~~l----~~li~~~DvV~~~tDs~esR~li~~~~~~~~kp~I~a-alG~~g~vv~~~g~~p~~~~ 525 (715)
+.++. .++++++|+||+|+||+++|++++++|+.+++|+|.+ ..|+.|++.++. |
T Consensus 512 -------------~~~~~~~~~~~~~~~~D~Vi~a~Dn~~aR~~ln~~c~~~~~Pli~~g~~G~~G~v~v~~---p---- 571 (1015)
T 3cmm_A 512 -------------GPETEEIFNDSFWESLDFVTNALDNVDARTYVDRRCVFYRKPLLESGTLGTKGNTQVII---P---- 571 (1015)
T ss_dssp -------------SGGGTTTSCHHHHHHCSEEEECCSSHHHHHHHHHHHHHHTCCEEEEEEETTEEEEEEEC---T----
T ss_pred -------------CchhhhhccHhhhccCCEEEECCCCHHHHHHHHHHHHHcCCcEEEeCCCccccceEEEe---C----
Confidence 22222 5788999999999999999999999999999999987 589999987664 2
Q ss_pred ccccchhccCccccccccCCCCCCCCCCcCceeecccCCCCCCCcccccccccccc-CcchHHHHHHHHHHHHHHHhc
Q 005071 526 HDVKTEAVNGLSADMDNLGLNNRDGGQRLGCYFCNDVVAPTDSTANRTLDQQCTVT-RPGLAPIASALAVELFVGVLH 602 (715)
Q Consensus 526 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gCy~C~d~~aP~~s~~drtLdq~CtV~-~Pgv~~ias~~A~Ell~~ll~ 602 (715)
..++||.|.. .|.. ..-+.||+. .|.....+...|.+++..+.+
T Consensus 572 --------------------------~~t~cy~c~~--dp~~-----~~~P~Ctl~~~P~~~~h~i~wa~~~f~~lf~ 616 (1015)
T 3cmm_A 572 --------------------------RLTESYSSSR--DPPE-----KSIPLCTLRSFPNKIDHTIAWAKSLFQGYFT 616 (1015)
T ss_dssp --------------------------TTBCCGGGSC--CCCC-----CCCCHHHHHTCCCSHHHHHHHHHHHHHHHHT
T ss_pred --------------------------CCCCccCCCC--CCCC-----CCCCcccccCCCCCcHHHHHHHHHHHHHHHh
Confidence 3578999982 2221 112689964 488888888889998877764
No 17
>3cmm_A Ubiquitin-activating enzyme E1 1; UBA1, protein turnover, ligase, conformationa thioester, adenylation, transthioesterification, ATP-bindin nucleotide-binding; 2.70A {Saccharomyces cerevisiae}
Probab=99.95 E-value=1.2e-27 Score=287.60 Aligned_cols=148 Identities=17% Similarity=0.181 Sum_probs=136.6
Q ss_pred hhhhhhhh-cCCchhHHhhccCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeCCcccccCCCcCCCCCcchhcCCCCcHH
Q 005071 345 NLKLMRWR-QLPSLNLDILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKA 423 (715)
Q Consensus 345 nlry~R~r-llp~~gq~kL~~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~~KA 423 (715)
..||+||+ +++..+|++|+++||+|||+|||||++|++|+++|||+|+|+|+|.|+.+||+||++|+.+|+ |++||
T Consensus 7 ~~rY~Rqi~l~G~~~q~rL~~s~VlIvG~GGlGseiak~La~aGVg~itlvD~D~V~~sNL~RQ~l~~~~dv---G~~Ka 83 (1015)
T 3cmm_A 7 ESLYSRQLYVLGKEAMLKMQTSNVLILGLKGLGVEIAKNVVLAGVKSMTVFDPEPVQLADLSTQFFLTEKDI---GQKRG 83 (1015)
T ss_dssp HHHHHHHHHHSCHHHHHHHTTCEEEEECCSHHHHHHHHHHHHHCCSEEEEECCSBCCGGGGGTCTTCCGGGT---TSBHH
T ss_pred hHhccchHhhcCHHHHHHHhcCEEEEECCChHHHHHHHHHHHcCCCeEEEecCCEechhhhccccccChhhc---ChHHH
Confidence 36899997 556667999999999999999999999999999999999999999999999999999999999 99999
Q ss_pred HHHHHHHHhhCCCcEEEEEecccCCCCCCCCCccccccccchhhHHHhhccCCEEEEeCC-ChHHHHHHHHHHHhcCCeE
Q 005071 424 MAAVKSLERIFPAVAAEGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTD-TRESRWLPTLLCANTNKIT 502 (715)
Q Consensus 424 eaaa~~L~~inP~v~v~~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tD-s~esR~li~~~~~~~~kp~ 502 (715)
++++++|+++||+++++.+...+ +. ++++++|+||+|+| +.++|+.++++|+++++|+
T Consensus 84 ~a~~~~L~~lNP~v~v~~~~~~l-----------------~~----~~l~~~DvVv~~~d~~~~~r~~ln~~c~~~~ipl 142 (1015)
T 3cmm_A 84 DVTRAKLAELNAYVPVNVLDSLD-----------------DV----TQLSQFQVVVATDTVSLEDKVKINEFCHSSGIRF 142 (1015)
T ss_dssp HHHHHHHTTSCTTSCEEECCCCC-----------------CS----TTGGGCSEEEECTTSCHHHHHHHHHHHHHHTCEE
T ss_pred HHHHHHHHHHCCCCeEEEecCCC-----------------CH----HHHhcCCEEEEcCCCCHHHHHHHHHHHHHcCCCE
Confidence 99999999999999999987543 21 47889999999999 9999999999999999999
Q ss_pred EEe-eeCCceEEEEE
Q 005071 503 ITA-ALGFDSFLVMR 516 (715)
Q Consensus 503 I~a-alG~~g~vv~~ 516 (715)
|.+ ..|+.|++++.
T Consensus 143 I~~~~~G~~G~v~~d 157 (1015)
T 3cmm_A 143 ISSETRGLFGNTFVD 157 (1015)
T ss_dssp EEEEEETTEEEEEEE
T ss_pred EEEEecccEEEEEec
Confidence 987 68999999764
No 18
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=98.05 E-value=8e-06 Score=85.67 Aligned_cols=80 Identities=26% Similarity=0.306 Sum_probs=66.6
Q ss_pred hhccCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeCCcccccCCCcCCCCCcchhcCCCCcHHHHHHHHHHhhCCCcEEE
Q 005071 361 ILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAE 440 (715)
Q Consensus 361 kL~~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~~KAeaaa~~L~~inP~v~v~ 440 (715)
.+++++|+|+|+||+|..++..|+..|+++|++++.+ ..|++.+++.+...+|.+++.
T Consensus 124 ~l~~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~----------------------~~~a~~la~~~~~~~~~~~i~ 181 (283)
T 3jyo_A 124 NAKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLD----------------------TSRAQALADVINNAVGREAVV 181 (283)
T ss_dssp TCCCSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSS----------------------HHHHHHHHHHHHHHHTSCCEE
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECC----------------------HHHHHHHHHHHHhhcCCceEE
Confidence 4678999999999999999999999999999998663 348889999999888887776
Q ss_pred EEecccCCCCCCCCCccccccccchhhHHHhhccCCEEEEeCC
Q 005071 441 GVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTD 483 (715)
Q Consensus 441 ~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tD 483 (715)
.+. .+++.+.+.++|+||+||-
T Consensus 182 ~~~---------------------~~~l~~~l~~~DiVInaTp 203 (283)
T 3jyo_A 182 GVD---------------------ARGIEDVIAAADGVVNATP 203 (283)
T ss_dssp EEC---------------------STTHHHHHHHSSEEEECSS
T ss_pred EcC---------------------HHHHHHHHhcCCEEEECCC
Confidence 653 2345667788999999985
No 19
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=97.85 E-value=5.9e-05 Score=80.33 Aligned_cols=85 Identities=18% Similarity=0.161 Sum_probs=66.0
Q ss_pred hhccCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeCCcccccCCCcCCCCCcchhcCCCCcHHHHHHHHHHhhCCCcEEE
Q 005071 361 ILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAE 440 (715)
Q Consensus 361 kL~~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~~KAeaaa~~L~~inP~v~v~ 440 (715)
.+++++|+|+|+||+|..++..|++.|+++|++++.+. + -..|++.+++.+.+..+ +.+.
T Consensus 151 ~l~gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~~--------------~-----~~~~a~~la~~~~~~~~-~~~~ 210 (315)
T 3tnl_A 151 DIIGKKMTICGAGGAATAICIQAALDGVKEISIFNRKD--------------D-----FYANAEKTVEKINSKTD-CKAQ 210 (315)
T ss_dssp CCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSS--------------T-----THHHHHHHHHHHHHHSS-CEEE
T ss_pred CccCCEEEEECCChHHHHHHHHHHHCCCCEEEEEECCC--------------c-----hHHHHHHHHHHhhhhcC-CceE
Confidence 36789999999999999999999999999999987631 1 13488888888887764 5555
Q ss_pred EEecccCCCCCCCCCccccccccchhhHHHhhccCCEEEEeCC
Q 005071 441 GVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTD 483 (715)
Q Consensus 441 ~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tD 483 (715)
.+.. .+.+.+.+.+.++|+||+||-
T Consensus 211 ~~~~------------------~~~~~l~~~l~~aDiIINaTp 235 (315)
T 3tnl_A 211 LFDI------------------EDHEQLRKEIAESVIFTNATG 235 (315)
T ss_dssp EEET------------------TCHHHHHHHHHTCSEEEECSS
T ss_pred Eecc------------------chHHHHHhhhcCCCEEEECcc
Confidence 5542 133556677889999999985
No 20
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=97.84 E-value=0.00014 Score=63.80 Aligned_cols=95 Identities=14% Similarity=0.050 Sum_probs=67.3
Q ss_pred cCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeCCcccccCCCcCCCCCcchhcCCCCcHHHHHHHHHHhhCCCcEEEEEe
Q 005071 364 SRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEGVV 443 (715)
Q Consensus 364 ~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~~KAeaaa~~L~~inP~v~v~~~~ 443 (715)
..+|+|+|+|++|..+++.|...|..+++++|.+ ..|.+.++ .+.+.+ +.
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~----------------------~~~~~~~~------~~~~~~--~~ 54 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVADHD----------------------LAALAVLN------RMGVAT--KQ 54 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESC----------------------HHHHHHHH------TTTCEE--EE
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCC----------------------HHHHHHHH------hCCCcE--EE
Confidence 4689999999999999999999997789998863 11222222 234443 22
Q ss_pred cccCCCCCCCCCccccccccchhhHHHhhccCCEEEEeCCChHHHHHHHHHHHhcCCeEEEe
Q 005071 444 MAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTRESRWLPTLLCANTNKITITA 505 (715)
Q Consensus 444 ~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~esR~li~~~~~~~~kp~I~a 505 (715)
.++ .+.+.+.++++++|+||.++.... ..-+...|.+.+++++..
T Consensus 55 ~d~----------------~~~~~~~~~~~~~d~vi~~~~~~~-~~~~~~~~~~~g~~~~~~ 99 (118)
T 3ic5_A 55 VDA----------------KDEAGLAKALGGFDAVISAAPFFL-TPIIAKAAKAAGAHYFDL 99 (118)
T ss_dssp CCT----------------TCHHHHHHHTTTCSEEEECSCGGG-HHHHHHHHHHTTCEEECC
T ss_pred ecC----------------CCHHHHHHHHcCCCEEEECCCchh-hHHHHHHHHHhCCCEEEe
Confidence 222 245677788899999999995443 345666788889888754
No 21
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=97.63 E-value=0.00019 Score=76.34 Aligned_cols=85 Identities=21% Similarity=0.230 Sum_probs=63.0
Q ss_pred hccCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeCCcccccCCCcCCCCCcchhcCCCCcHHHHHHHHHHhhCCCcEEEE
Q 005071 362 LSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEG 441 (715)
Q Consensus 362 L~~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~~KAeaaa~~L~~inP~v~v~~ 441 (715)
+++++|+|+|+||.|..++..|++.|+++|++++.+. + ...|++.+++.+....+ ..+..
T Consensus 146 l~gk~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt~--------------~-----~~~~a~~la~~~~~~~~-~~v~~ 205 (312)
T 3t4e_A 146 MRGKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRKD--------------D-----FFEKAVAFAKRVNENTD-CVVTV 205 (312)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSS--------------T-----HHHHHHHHHHHHHHHSS-CEEEE
T ss_pred cCCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEECCC--------------c-----hHHHHHHHHHHhhhccC-cceEE
Confidence 6789999999999999999999999999999987631 1 13478888888887653 44544
Q ss_pred EecccCCCCCCCCCccccccccchhhHHHhhccCCEEEEeCCC
Q 005071 442 VVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDT 484 (715)
Q Consensus 442 ~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs 484 (715)
+.. .+.+.+.+.+.++|+||+||-.
T Consensus 206 ~~~------------------~~l~~~~~~l~~~DiIINaTp~ 230 (312)
T 3t4e_A 206 TDL------------------ADQHAFTEALASADILTNGTKV 230 (312)
T ss_dssp EET------------------TCHHHHHHHHHHCSEEEECSST
T ss_pred ech------------------HhhhhhHhhccCceEEEECCcC
Confidence 431 1222335567889999998853
No 22
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=97.39 E-value=0.0007 Score=74.07 Aligned_cols=101 Identities=20% Similarity=0.159 Sum_probs=71.5
Q ss_pred CeEEEEcCChHHHHHHHHHHHhc-C-CeEEEEeCCcccccCCCcCCCCCcchhcCCCCcHHHHHHHHHHhhCCCcEEEEE
Q 005071 365 RKCLLLGAGTLGCQVARMLMAWG-V-RKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEGV 442 (715)
Q Consensus 365 ~kVlIvGaGgLGs~VA~~La~~G-V-g~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~~KAeaaa~~L~~inP~v~v~~~ 442 (715)
+||+|+|+|++|..+++.|++.| + .+++++|.+ ..|++.+++.+....+ .++..+
T Consensus 2 ~kVlIiGaGgiG~~ia~~L~~~g~~~~~V~v~~r~----------------------~~~~~~la~~l~~~~~-~~~~~~ 58 (405)
T 4ina_A 2 AKVLQIGAGGVGGVVAHKMAMNREVFSHITLASRT----------------------LSKCQEIAQSIKAKGY-GEIDIT 58 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHTCTTTCCEEEEEESC----------------------HHHHHHHHHHHHHTTC-CCCEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCceEEEEEECC----------------------HHHHHHHHHHhhhhcC-CceEEE
Confidence 48999999999999999999998 4 689998762 3366666776665431 223344
Q ss_pred ecccCCCCCCCCCccccccccchhhHHHhhcc--CCEEEEeCCChHHHHHHHHHHHhcCCeEEEe
Q 005071 443 VMAIPMPGHPVPCQEEDSVLDDCRRLTDLILS--HDVIFLLTDTRESRWLPTLLCANTNKITITA 505 (715)
Q Consensus 443 ~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~--~DvV~~~tDs~esR~li~~~~~~~~kp~I~a 505 (715)
..++ .+.+.+.+++++ .|+||.++.... ..-+...|.+.++.+|+.
T Consensus 59 ~~D~----------------~d~~~l~~~l~~~~~DvVin~ag~~~-~~~v~~a~l~~g~~vvD~ 106 (405)
T 4ina_A 59 TVDA----------------DSIEELVALINEVKPQIVLNIALPYQ-DLTIMEACLRTGVPYLDT 106 (405)
T ss_dssp ECCT----------------TCHHHHHHHHHHHCCSEEEECSCGGG-HHHHHHHHHHHTCCEEES
T ss_pred EecC----------------CCHHHHHHHHHhhCCCEEEECCCccc-ChHHHHHHHHhCCCEEEe
Confidence 3332 245677777877 899999987543 345566788888888763
No 23
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=97.35 E-value=0.00044 Score=74.26 Aligned_cols=94 Identities=12% Similarity=0.115 Sum_probs=66.3
Q ss_pred ccCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeCCcccccCCCcCCCCCcchhcCCCCcHHHHHHHHHHhhCCCcEEEEE
Q 005071 363 SSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEGV 442 (715)
Q Consensus 363 ~~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~~KAeaaa~~L~~inP~v~v~~~ 442 (715)
++.||+|+|||.+|..+|+.|++- ..++++|.+ ..|++. +.+.+. .+
T Consensus 15 ~~mkilvlGaG~vG~~~~~~L~~~--~~v~~~~~~----------------------~~~~~~-------~~~~~~--~~ 61 (365)
T 3abi_A 15 RHMKVLILGAGNIGRAIAWDLKDE--FDVYIGDVN----------------------NENLEK-------VKEFAT--PL 61 (365)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTTT--SEEEEEESC----------------------HHHHHH-------HTTTSE--EE
T ss_pred CccEEEEECCCHHHHHHHHHHhcC--CCeEEEEcC----------------------HHHHHH-------HhccCC--cE
Confidence 345799999999999999999753 567776642 122222 223333 22
Q ss_pred ecccCCCCCCCCCccccccccchhhHHHhhccCCEEEEeCCChHHHHHHHHHHHhcCCeEEEee
Q 005071 443 VMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTRESRWLPTLLCANTNKITITAA 506 (715)
Q Consensus 443 ~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~esR~li~~~~~~~~kp~I~aa 506 (715)
..++ .+.+.+.++++++|+||.|+... .-..+.+.|.+.|+.+++.+
T Consensus 62 ~~d~----------------~d~~~l~~~~~~~DvVi~~~p~~-~~~~v~~~~~~~g~~yvD~s 108 (365)
T 3abi_A 62 KVDA----------------SNFDKLVEVMKEFELVIGALPGF-LGFKSIKAAIKSKVDMVDVS 108 (365)
T ss_dssp ECCT----------------TCHHHHHHHHTTCSEEEECCCGG-GHHHHHHHHHHHTCEEEECC
T ss_pred EEec----------------CCHHHHHHHHhCCCEEEEecCCc-ccchHHHHHHhcCcceEeee
Confidence 3222 36778899999999999999765 34568889999999999864
No 24
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=97.33 E-value=0.00044 Score=72.01 Aligned_cols=57 Identities=26% Similarity=0.436 Sum_probs=49.4
Q ss_pred hccCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeCCcccccCCCcCCCCCcchhcCCCCcHHHHHHHHHHhhCCCcEEE
Q 005071 362 LSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAE 440 (715)
Q Consensus 362 L~~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~~KAeaaa~~L~~inP~v~v~ 440 (715)
+++++|+|+|+||.+..++..|+..|+++|++++. -..|++.+++.+...+|.+.+.
T Consensus 123 ~~~~~~lilGaGGaarai~~aL~~~g~~~i~i~nR----------------------t~~ra~~la~~~~~~~~~~~~~ 179 (269)
T 3tum_A 123 PAGKRALVIGCGGVGSAIAYALAEAGIASITLCDP----------------------STARMGAVCELLGNGFPGLTVS 179 (269)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECS----------------------CHHHHHHHHHHHHHHCTTCEEE
T ss_pred cccCeEEEEecHHHHHHHHHHHHHhCCCeEEEeCC----------------------CHHHHHHHHHHHhccCCcceeh
Confidence 46789999999999999999999999999999864 2348999999999988877653
No 25
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=97.27 E-value=0.0022 Score=60.12 Aligned_cols=95 Identities=17% Similarity=0.241 Sum_probs=61.0
Q ss_pred HhhccCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeCCcccccCCCcCCCCCcchhcCCCCcHHHHHHHHHHhhCCCcEE
Q 005071 360 DILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAA 439 (715)
Q Consensus 360 ~kL~~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~~KAeaaa~~L~~inP~v~v 439 (715)
+++.+.+|+|+|+|.+|..+++.|.+.|. +++++|.+.-....+.+ ..++.
T Consensus 15 ~~~~~~~v~IiG~G~iG~~la~~L~~~g~-~V~vid~~~~~~~~~~~---------------------------~~g~~- 65 (155)
T 2g1u_A 15 KKQKSKYIVIFGCGRLGSLIANLASSSGH-SVVVVDKNEYAFHRLNS---------------------------EFSGF- 65 (155)
T ss_dssp --CCCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCGGGGGGSCT---------------------------TCCSE-
T ss_pred cccCCCcEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHh---------------------------cCCCc-
Confidence 56678899999999999999999999996 89999975321111110 01111
Q ss_pred EEEecccCCCCCCCCCccccccccchhhHHHh-hccCCEEEEeCCChHHHHHHHHHHHh-cCC
Q 005071 440 EGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDL-ILSHDVIFLLTDTRESRWLPTLLCAN-TNK 500 (715)
Q Consensus 440 ~~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~l-i~~~DvV~~~tDs~esR~li~~~~~~-~~k 500 (715)
.+..+. .+.+.+.+. +.++|+||.|+.+.+....+..+++. .+.
T Consensus 66 -~~~~d~----------------~~~~~l~~~~~~~ad~Vi~~~~~~~~~~~~~~~~~~~~~~ 111 (155)
T 2g1u_A 66 -TVVGDA----------------AEFETLKECGMEKADMVFAFTNDDSTNFFISMNARYMFNV 111 (155)
T ss_dssp -EEESCT----------------TSHHHHHTTTGGGCSEEEECSSCHHHHHHHHHHHHHTSCC
T ss_pred -EEEecC----------------CCHHHHHHcCcccCCEEEEEeCCcHHHHHHHHHHHHHCCC
Confidence 111110 122333333 67899999999998877777777765 443
No 26
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=97.19 E-value=0.0021 Score=58.88 Aligned_cols=94 Identities=14% Similarity=0.130 Sum_probs=63.3
Q ss_pred ccCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeCCcccccCCCcCCCCCcchhcCCCCcHHHHHHHHHHhhCCCcEEEEE
Q 005071 363 SSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEGV 442 (715)
Q Consensus 363 ~~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~~KAeaaa~~L~~inP~v~v~~~ 442 (715)
+..+|+|+|+|.+|..+|+.|...|. +++++|.+. .+++.++ +. ++. .+
T Consensus 5 ~~~~v~I~G~G~iG~~la~~L~~~g~-~V~~id~~~----------------------~~~~~~~----~~--~~~--~~ 53 (141)
T 3llv_A 5 GRYEYIVIGSEAAGVGLVRELTAAGK-KVLAVDKSK----------------------EKIELLE----DE--GFD--AV 53 (141)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTTC-CEEEEESCH----------------------HHHHHHH----HT--TCE--EE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEECCH----------------------HHHHHHH----HC--CCc--EE
Confidence 45789999999999999999999996 788888631 1222222 21 233 23
Q ss_pred ecccCCCCCCCCCccccccccchhhHHHh-hccCCEEEEeCCChHHHHHHHHHHHhcCCeEE
Q 005071 443 VMAIPMPGHPVPCQEEDSVLDDCRRLTDL-ILSHDVIFLLTDTRESRWLPTLLCANTNKITI 503 (715)
Q Consensus 443 ~~~Ipmpgh~~~~~~~~~~~~~~~~l~~l-i~~~DvV~~~tDs~esR~li~~~~~~~~kp~I 503 (715)
..+. .+.+.+.++ ++++|+||.++++.+....+...++..+.+.|
T Consensus 54 ~gd~----------------~~~~~l~~~~~~~~d~vi~~~~~~~~n~~~~~~a~~~~~~~i 99 (141)
T 3llv_A 54 IADP----------------TDESFYRSLDLEGVSAVLITGSDDEFNLKILKALRSVSDVYA 99 (141)
T ss_dssp ECCT----------------TCHHHHHHSCCTTCSEEEECCSCHHHHHHHHHHHHHHCCCCE
T ss_pred ECCC----------------CCHHHHHhCCcccCCEEEEecCCHHHHHHHHHHHHHhCCceE
Confidence 2221 133334433 57899999999998888888888887764433
No 27
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=97.13 E-value=0.00064 Score=71.46 Aligned_cols=76 Identities=17% Similarity=0.151 Sum_probs=56.2
Q ss_pred hccCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeCCcccccCCCcCCCCCcchhcCCCCcHHHHHHHHHHhhCCCcEEEE
Q 005071 362 LSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEG 441 (715)
Q Consensus 362 L~~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~~KAeaaa~~L~~inP~v~v~~ 441 (715)
+++++|+|+|+|+.|..++..|+..|+.+|+++|.+ ..|++.+++.+....+ ..
T Consensus 139 l~~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~----------------------~~ka~~la~~~~~~~~----~~ 192 (297)
T 2egg_A 139 LDGKRILVIGAGGGARGIYFSLLSTAAERIDMANRT----------------------VEKAERLVREGDERRS----AY 192 (297)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSS----------------------HHHHHHHHHHSCSSSC----CE
T ss_pred CCCCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCC----------------------HHHHHHHHHHhhhccC----ce
Confidence 568899999999999999999999999999998762 2366666655432111 11
Q ss_pred EecccCCCCCCCCCccccccccchhhHHHhhccCCEEEEeCCC
Q 005071 442 VVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDT 484 (715)
Q Consensus 442 ~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs 484 (715)
. +.+.+.+.+.++|+||.||-.
T Consensus 193 ~---------------------~~~~~~~~~~~aDivIn~t~~ 214 (297)
T 2egg_A 193 F---------------------SLAEAETRLAEYDIIINTTSV 214 (297)
T ss_dssp E---------------------CHHHHHHTGGGCSEEEECSCT
T ss_pred e---------------------eHHHHHhhhccCCEEEECCCC
Confidence 1 224566778899999999975
No 28
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=97.12 E-value=0.00069 Score=70.56 Aligned_cols=35 Identities=26% Similarity=0.372 Sum_probs=32.9
Q ss_pred hccCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 362 LSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 362 L~~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
+++++|+|+|+||.|..++..|+..|+.+|++++.
T Consensus 118 l~~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R 152 (272)
T 3pwz_A 118 LRNRRVLLLGAGGAVRGALLPFLQAGPSELVIANR 152 (272)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHHTCCSEEEEECS
T ss_pred ccCCEEEEECccHHHHHHHHHHHHcCCCEEEEEeC
Confidence 67899999999999999999999999999999865
No 29
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=97.07 E-value=0.0018 Score=58.51 Aligned_cols=36 Identities=17% Similarity=0.393 Sum_probs=29.9
Q ss_pred hhccCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeCC
Q 005071 361 ILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNG 397 (715)
Q Consensus 361 kL~~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~D 397 (715)
+++.++|+|+|+|.+|..+++.|...|. +++++|.+
T Consensus 3 ~~~~~~v~I~G~G~iG~~~a~~l~~~g~-~v~~~d~~ 38 (144)
T 2hmt_A 3 RIKNKQFAVIGLGRFGGSIVKELHRMGH-EVLAVDIN 38 (144)
T ss_dssp ---CCSEEEECCSHHHHHHHHHHHHTTC-CCEEEESC
T ss_pred CCcCCcEEEECCCHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 4567889999999999999999999996 68888864
No 30
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=97.00 E-value=0.0013 Score=71.17 Aligned_cols=94 Identities=12% Similarity=0.112 Sum_probs=65.9
Q ss_pred ccCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeCCcccccCCCcCCCCCcchhcCCCCcHHHHHHHHHHhhCCCcEEEEE
Q 005071 363 SSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEGV 442 (715)
Q Consensus 363 ~~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~~KAeaaa~~L~~inP~v~v~~~ 442 (715)
+++||+|+|+|++|..+|+.|++. .+++++|.+ ..|++.+++. .. ..
T Consensus 15 ~~~~v~IiGaG~iG~~ia~~L~~~--~~V~V~~R~----------------------~~~a~~la~~-------~~--~~ 61 (365)
T 2z2v_A 15 RHMKVLILGAGNIGRAIAWDLKDE--FDVYIGDVN----------------------NENLEKVKEF-------AT--PL 61 (365)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTTT--SEEEEEESC----------------------HHHHHHHTTT-------SE--EE
T ss_pred CCCeEEEEcCCHHHHHHHHHHHcC--CeEEEEECC----------------------HHHHHHHHhh-------CC--eE
Confidence 688999999999999999999987 678887762 2244433321 11 12
Q ss_pred ecccCCCCCCCCCccccccccchhhHHHhhccCCEEEEeCCChHHHHHHHHHHHhcCCeEEEee
Q 005071 443 VMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTRESRWLPTLLCANTNKITITAA 506 (715)
Q Consensus 443 ~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~esR~li~~~~~~~~kp~I~aa 506 (715)
..++ .+.+.+.++++++|+||.|+-... -..+...|.+.|+.+++.+
T Consensus 62 ~~d~----------------~~~~~l~~ll~~~DvVIn~~P~~~-~~~v~~a~l~~G~~~vD~s 108 (365)
T 2z2v_A 62 KVDA----------------SNFDKLVEVMKEFELVIGALPGFL-GFKSIKAAIKSKVDMVDVS 108 (365)
T ss_dssp ECCT----------------TCHHHHHHHHTTCSCEEECCCHHH-HHHHHHHHHHTTCCEEECC
T ss_pred EEec----------------CCHHHHHHHHhCCCEEEECCChhh-hHHHHHHHHHhCCeEEEcc
Confidence 2111 245778889999999999976443 2346678899999998854
No 31
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=96.87 E-value=0.0017 Score=67.88 Aligned_cols=50 Identities=24% Similarity=0.207 Sum_probs=42.8
Q ss_pred hccCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeCCcccccCCCcCCCCCcchhcCCCCcHHHHHHHHHHhh
Q 005071 362 LSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERI 433 (715)
Q Consensus 362 L~~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~~KAeaaa~~L~~i 433 (715)
+++++|+|+|+||.|..++..|+..|+.+|++++. ...|++.+++.+...
T Consensus 124 l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R----------------------~~~~a~~la~~~~~~ 173 (281)
T 3o8q_A 124 LKGATILLIGAGGAARGVLKPLLDQQPASITVTNR----------------------TFAKAEQLAELVAAY 173 (281)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTCCSEEEEEES----------------------SHHHHHHHHHHHGGG
T ss_pred ccCCEEEEECchHHHHHHHHHHHhcCCCeEEEEEC----------------------CHHHHHHHHHHhhcc
Confidence 67899999999999999999999999999999876 233777788877664
No 32
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=96.86 E-value=0.0081 Score=55.96 Aligned_cols=93 Identities=15% Similarity=0.124 Sum_probs=63.6
Q ss_pred ccCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeCCcccccCCCcCCCCCcchhcCCCCcHHHHHHHHHHhhCCCcEEEEE
Q 005071 363 SSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEGV 442 (715)
Q Consensus 363 ~~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~~KAeaaa~~L~~inP~v~v~~~ 442 (715)
.+.+|+|+|+|.+|..+++.|...|. +++++|.+. ..|++.+++.+ ..++.+ +
T Consensus 2 ~~~~vlI~G~G~vG~~la~~L~~~g~-~V~vid~~~---------------------~~~~~~~~~~~---~~~~~~--i 54 (153)
T 1id1_A 2 RKDHFIVCGHSILAINTILQLNQRGQ-NVTVISNLP---------------------EDDIKQLEQRL---GDNADV--I 54 (153)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHTTC-CEEEEECCC---------------------HHHHHHHHHHH---CTTCEE--E
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCC-CEEEEECCC---------------------hHHHHHHHHhh---cCCCeE--E
Confidence 46789999999999999999999994 688888731 11222222221 123333 3
Q ss_pred ecccCCCCCCCCCccccccccchhhHHHh-hccCCEEEEeCCChHHHHHHHHHHHhc
Q 005071 443 VMAIPMPGHPVPCQEEDSVLDDCRRLTDL-ILSHDVIFLLTDTRESRWLPTLLCANT 498 (715)
Q Consensus 443 ~~~Ipmpgh~~~~~~~~~~~~~~~~l~~l-i~~~DvV~~~tDs~esR~li~~~~~~~ 498 (715)
..+. .+.+.+.+. ++++|+||.++++.+.-..+...++..
T Consensus 55 ~gd~----------------~~~~~l~~a~i~~ad~vi~~~~~d~~n~~~~~~a~~~ 95 (153)
T 1id1_A 55 PGDS----------------NDSSVLKKAGIDRCRAILALSDNDADNAFVVLSAKDM 95 (153)
T ss_dssp ESCT----------------TSHHHHHHHTTTTCSEEEECSSCHHHHHHHHHHHHHH
T ss_pred EcCC----------------CCHHHHHHcChhhCCEEEEecCChHHHHHHHHHHHHH
Confidence 3211 234455554 789999999999988888888888776
No 33
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=96.83 E-value=0.0072 Score=54.34 Aligned_cols=90 Identities=19% Similarity=0.225 Sum_probs=57.0
Q ss_pred cCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeCCcccccCCCcCCCCCcchhcCCCCcHHHHHHHHHHhhCCCcEEEEEe
Q 005071 364 SRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEGVV 443 (715)
Q Consensus 364 ~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~~KAeaaa~~L~~inP~v~v~~~~ 443 (715)
..+|+|+|+|.+|..+++.|...|. +++++|.+. .+++. +.+.. ++. .+.
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~-~v~~~d~~~----------------------~~~~~----~~~~~-~~~--~~~ 53 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGH-DIVLIDIDK----------------------DICKK----ASAEI-DAL--VIN 53 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCH----------------------HHHHH----HHHHC-SSE--EEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC-eEEEEECCH----------------------HHHHH----HHHhc-CcE--EEE
Confidence 3589999999999999999999994 688888621 12222 22211 222 222
Q ss_pred cccCCCCCCCCCccccccccchhhHHHh-hccCCEEEEeCCChHHHHHHHHHHHhcC
Q 005071 444 MAIPMPGHPVPCQEEDSVLDDCRRLTDL-ILSHDVIFLLTDTRESRWLPTLLCANTN 499 (715)
Q Consensus 444 ~~Ipmpgh~~~~~~~~~~~~~~~~l~~l-i~~~DvV~~~tDs~esR~li~~~~~~~~ 499 (715)
.+. .+.+.+.+. ++++|+||.++.+.+....+..++...+
T Consensus 54 ~d~----------------~~~~~l~~~~~~~~d~vi~~~~~~~~~~~~~~~~~~~~ 94 (140)
T 1lss_A 54 GDC----------------TKIKTLEDAGIEDADMYIAVTGKEEVNLMSSLLAKSYG 94 (140)
T ss_dssp SCT----------------TSHHHHHHTTTTTCSEEEECCSCHHHHHHHHHHHHHTT
T ss_pred cCC----------------CCHHHHHHcCcccCCEEEEeeCCchHHHHHHHHHHHcC
Confidence 111 122333332 6789999999998776666666666655
No 34
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=96.81 E-value=0.0013 Score=60.82 Aligned_cols=32 Identities=25% Similarity=0.378 Sum_probs=30.2
Q ss_pred cCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 364 SRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 364 ~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
+++|+|+|+|++|..+++.|...|+. ++++|.
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~-v~v~~r 52 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYK-VTVAGR 52 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCE-EEEEES
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCE-EEEEcC
Confidence 88999999999999999999999988 999886
No 35
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=96.79 E-value=0.003 Score=65.42 Aligned_cols=80 Identities=20% Similarity=0.250 Sum_probs=57.5
Q ss_pred hccCeEEEEc-CChHHHHHHHHHHHhcCCeEEEEeCCcccccCCCcCCCCCcchhcCCCCcHHHHHHHHHHhhCCCcEEE
Q 005071 362 LSSRKCLLLG-AGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAE 440 (715)
Q Consensus 362 L~~~kVlIvG-aGgLGs~VA~~La~~GVg~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~~KAeaaa~~L~~inP~v~v~ 440 (715)
+++++|+|+| +||+|..+++.|+..|.. ++++|.+ ..|++.+++.+... +.+.+.
T Consensus 117 l~gk~vlVtGaaGGiG~aia~~L~~~G~~-V~i~~R~----------------------~~~~~~l~~~~~~~-~~~~~~ 172 (287)
T 1lu9_A 117 VKGKKAVVLAGTGPVGMRSAALLAGEGAE-VVLCGRK----------------------LDKAQAAADSVNKR-FKVNVT 172 (287)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTCE-EEEEESS----------------------HHHHHHHHHHHHHH-HTCCCE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcCE-EEEEECC----------------------HHHHHHHHHHHHhc-CCcEEE
Confidence 5788999999 999999999999999986 9998752 22556666666543 233333
Q ss_pred EEecccCCCCCCCCCccccccccchhhHHHhhccCCEEEEeCC
Q 005071 441 GVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTD 483 (715)
Q Consensus 441 ~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tD 483 (715)
..+ + .+.+.+.++++++|+||.++-
T Consensus 173 ~~D--~----------------~~~~~~~~~~~~~DvlVn~ag 197 (287)
T 1lu9_A 173 AAE--T----------------ADDASRAEAVKGAHFVFTAGA 197 (287)
T ss_dssp EEE--C----------------CSHHHHHHHTTTCSEEEECCC
T ss_pred Eec--C----------------CCHHHHHHHHHhCCEEEECCC
Confidence 222 1 244567778888999999985
No 36
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=96.79 E-value=0.0053 Score=58.76 Aligned_cols=91 Identities=13% Similarity=0.043 Sum_probs=59.9
Q ss_pred hccCeEEEEcCChHHHHHHHHHHHh-cCCeEEEEeCCcccccCCCcCCCCCcchhcCCCCcHHHHHHHHHHhhCCCcEEE
Q 005071 362 LSSRKCLLLGAGTLGCQVARMLMAW-GVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAE 440 (715)
Q Consensus 362 L~~~kVlIvGaGgLGs~VA~~La~~-GVg~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~~KAeaaa~~L~~inP~v~v~ 440 (715)
+.+.+|+|+|+|.+|..+|+.|.+. |. +++++|.+. .|++. +++. ++.+
T Consensus 37 ~~~~~v~IiG~G~~G~~~a~~L~~~~g~-~V~vid~~~----------------------~~~~~----~~~~--g~~~- 86 (183)
T 3c85_A 37 PGHAQVLILGMGRIGTGAYDELRARYGK-ISLGIEIRE----------------------EAAQQ----HRSE--GRNV- 86 (183)
T ss_dssp CTTCSEEEECCSHHHHHHHHHHHHHHCS-CEEEEESCH----------------------HHHHH----HHHT--TCCE-
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhccCC-eEEEEECCH----------------------HHHHH----HHHC--CCCE-
Confidence 5677999999999999999999999 86 688888632 12222 2222 2322
Q ss_pred EEecccCCCCCCCCCccccccccchhhHHHh--hccCCEEEEeCCChHHHHHHHHHHHhcC
Q 005071 441 GVVMAIPMPGHPVPCQEEDSVLDDCRRLTDL--ILSHDVIFLLTDTRESRWLPTLLCANTN 499 (715)
Q Consensus 441 ~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~l--i~~~DvV~~~tDs~esR~li~~~~~~~~ 499 (715)
+..+. .+.+.+.+. ++++|+||.++.+.+.-..+...++..+
T Consensus 87 -~~gd~----------------~~~~~l~~~~~~~~ad~vi~~~~~~~~~~~~~~~~~~~~ 130 (183)
T 3c85_A 87 -ISGDA----------------TDPDFWERILDTGHVKLVLLAMPHHQGNQTALEQLQRRN 130 (183)
T ss_dssp -EECCT----------------TCHHHHHTBCSCCCCCEEEECCSSHHHHHHHHHHHHHTT
T ss_pred -EEcCC----------------CCHHHHHhccCCCCCCEEEEeCCChHHHHHHHHHHHHHC
Confidence 21111 133445555 7889999999998776555555666655
No 37
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=96.78 E-value=0.0012 Score=69.18 Aligned_cols=35 Identities=20% Similarity=0.358 Sum_probs=33.0
Q ss_pred hccCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 362 LSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 362 L~~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
+++++|+|+|+||.|..++..|...|+++|++++.
T Consensus 120 ~~~k~vlvlGaGGaaraia~~L~~~G~~~v~v~nR 154 (282)
T 3fbt_A 120 IKNNICVVLGSGGAARAVLQYLKDNFAKDIYVVTR 154 (282)
T ss_dssp CTTSEEEEECSSTTHHHHHHHHHHTTCSEEEEEES
T ss_pred ccCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeC
Confidence 57899999999999999999999999999999865
No 38
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=96.72 E-value=0.00089 Score=69.99 Aligned_cols=37 Identities=22% Similarity=0.205 Sum_probs=34.2
Q ss_pred hhccCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeCC
Q 005071 361 ILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNG 397 (715)
Q Consensus 361 kL~~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~D 397 (715)
.+++++|+|+|+||.|..++..|++.|+++|++++.+
T Consensus 114 ~l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~ 150 (277)
T 3don_A 114 GIEDAYILILGAGGASKGIANELYKIVRPTLTVANRT 150 (277)
T ss_dssp TGGGCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSC
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 3678999999999999999999999999999998764
No 39
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=96.67 E-value=0.0019 Score=65.58 Aligned_cols=91 Identities=14% Similarity=0.157 Sum_probs=64.7
Q ss_pred hhccCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeCCcccccCCCcCCCCCcchhcCCCCcHHHHHHHHHHhhCCCcEEE
Q 005071 361 ILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAE 440 (715)
Q Consensus 361 kL~~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~~KAeaaa~~L~~inP~v~v~ 440 (715)
.|++++|||||+|.+|...++.|...|. ++++|+++.- ..+ .. |.+ ...+.
T Consensus 28 ~L~gk~VLVVGgG~va~~ka~~Ll~~GA-~VtVvap~~~-------------~~l--------~~----l~~-~~~i~-- 78 (223)
T 3dfz_A 28 DLKGRSVLVVGGGTIATRRIKGFLQEGA-AITVVAPTVS-------------AEI--------NE----WEA-KGQLR-- 78 (223)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHGGGCC-CEEEECSSCC-------------HHH--------HH----HHH-TTSCE--
T ss_pred EcCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEECCCCC-------------HHH--------HH----HHH-cCCcE--
Confidence 5889999999999999999999999995 8999987310 111 11 111 12333
Q ss_pred EEecccCCCCCCCCCccccccccchhhHHHhhccCCEEEEeCCChHHHHHHHHHHHhcCCeE
Q 005071 441 GVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTRESRWLPTLLCANTNKIT 502 (715)
Q Consensus 441 ~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~esR~li~~~~~~~~kp~ 502 (715)
.+...+ . .+.++++|+||.+||+.+.-..+...|. .++|+
T Consensus 79 ~i~~~~-----------------~----~~dL~~adLVIaAT~d~~~N~~I~~~ak-~gi~V 118 (223)
T 3dfz_A 79 VKRKKV-----------------G----EEDLLNVFFIVVATNDQAVNKFVKQHIK-NDQLV 118 (223)
T ss_dssp EECSCC-----------------C----GGGSSSCSEEEECCCCTHHHHHHHHHSC-TTCEE
T ss_pred EEECCC-----------------C----HhHhCCCCEEEECCCCHHHHHHHHHHHh-CCCEE
Confidence 222211 1 2346789999999999998888888887 88874
No 40
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=96.58 E-value=0.009 Score=62.17 Aligned_cols=105 Identities=12% Similarity=0.014 Sum_probs=66.8
Q ss_pred cCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeCCcccccCCCcCCCCCcchhcCCCCcHHHHHHHHHH-------hh-CC
Q 005071 364 SRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLE-------RI-FP 435 (715)
Q Consensus 364 ~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~~KAeaaa~~L~-------~i-nP 435 (715)
+++|+|+|+||.|..++..|+..| .+|++++.+. .|++.++ .+. ++ ..
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G-~~v~V~nRt~----------------------~ka~~la-~~~~~~~~~~~l~~~ 173 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQG-LQVSVLNRSS----------------------RGLDFFQ-RLGCDCFMEPPKSAF 173 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT-CEEEEECSSC----------------------TTHHHHH-HHTCEEESSCCSSCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC-CEEEEEeCCH----------------------HHHHHHH-HCCCeEecHHHhccC
Confidence 889999999999999999999999 9999987642 1333333 221 00 12
Q ss_pred CcEEEEEecccCCCCCCCCCccccccccchhhHHHhhccCCEEEEeCCChHHHHHHHHHHHhcCCeEEEe
Q 005071 436 AVAAEGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTRESRWLPTLLCANTNKITITA 505 (715)
Q Consensus 436 ~v~v~~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~esR~li~~~~~~~~kp~I~a 505 (715)
++-|.+ ..+.|.+++ ....+.+.+.+...-+|+|..-+++++ +-+.|++.|..++++
T Consensus 174 DiVIna--Tp~Gm~~~~---------~l~~~~l~~~l~~~~~v~D~vY~P~T~--ll~~A~~~G~~~~~G 230 (269)
T 3phh_A 174 DLIINA--TSASLHNEL---------PLNKEVLKGYFKEGKLAYDLAYGFLTP--FLSLAKELKTPFQDG 230 (269)
T ss_dssp SEEEEC--CTTCCCCSC---------SSCHHHHHHHHHHCSEEEESCCSSCCH--HHHHHHHTTCCEECS
T ss_pred CEEEEc--ccCCCCCCC---------CCChHHHHhhCCCCCEEEEeCCCCchH--HHHHHHHCcCEEECC
Confidence 232322 223343321 123333444566778899988876444 456678888887765
No 41
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=96.55 E-value=0.0057 Score=68.33 Aligned_cols=37 Identities=24% Similarity=0.214 Sum_probs=29.9
Q ss_pred hhccCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeCC
Q 005071 361 ILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNG 397 (715)
Q Consensus 361 kL~~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~D 397 (715)
.++.++|+|+|+|++|..+++.|++.|--+|+++|.+
T Consensus 20 ~l~~k~VlIiGAGgiG~aia~~L~~~~g~~V~v~~R~ 56 (467)
T 2axq_A 20 RHMGKNVLLLGSGFVAQPVIDTLAANDDINVTVACRT 56 (467)
T ss_dssp ---CEEEEEECCSTTHHHHHHHHHTSTTEEEEEEESS
T ss_pred CCCCCEEEEECChHHHHHHHHHHHhCCCCeEEEEECC
Confidence 4667899999999999999999999843479998863
No 42
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=96.51 E-value=0.0011 Score=68.24 Aligned_cols=35 Identities=23% Similarity=0.408 Sum_probs=32.3
Q ss_pred hccCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeCC
Q 005071 362 LSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNG 397 (715)
Q Consensus 362 L~~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~D 397 (715)
+++ +|+|+|+||.|..++..|+..|+++|++++.+
T Consensus 107 ~~~-~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~ 141 (253)
T 3u62_A 107 VKE-PVVVVGAGGAARAVIYALLQMGVKDIWVVNRT 141 (253)
T ss_dssp CCS-SEEEECCSHHHHHHHHHHHHTTCCCEEEEESC
T ss_pred CCC-eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 567 99999999999999999999999999998873
No 43
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=96.50 E-value=0.01 Score=58.70 Aligned_cols=39 Identities=15% Similarity=0.136 Sum_probs=29.2
Q ss_pred hhHHhhccCeEEEEcC-ChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 357 LNLDILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 357 ~gq~kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
....++++++|+|.|+ |++|..+++.|+..|. ++++++.
T Consensus 14 ~~~~~l~~~~ilVtGatG~iG~~l~~~L~~~G~-~V~~~~R 53 (236)
T 3e8x_A 14 RENLYFQGMRVLVVGANGKVARYLLSELKNKGH-EPVAMVR 53 (236)
T ss_dssp -------CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred ccccCcCCCeEEEECCCChHHHHHHHHHHhCCC-eEEEEEC
Confidence 3457889999999998 9999999999999995 7888775
No 44
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=96.49 E-value=0.0054 Score=67.04 Aligned_cols=35 Identities=34% Similarity=0.637 Sum_probs=32.9
Q ss_pred hccCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 362 LSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 362 L~~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
+.+++|+|+|+|++|..+++.|...|+++|+++|.
T Consensus 165 l~g~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r 199 (404)
T 1gpj_A 165 LHDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANR 199 (404)
T ss_dssp CTTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECS
T ss_pred ccCCEEEEEChHHHHHHHHHHHHHCCCCEEEEEeC
Confidence 67899999999999999999999999999999875
No 45
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=96.43 E-value=0.015 Score=57.44 Aligned_cols=90 Identities=16% Similarity=0.159 Sum_probs=61.6
Q ss_pred eEEEEcCChHHHHHHHHHHHhcCCeEEEEeCCcccccCCCcCCCCCcchhcCCCCcHHHHHHHHHHhhCCCcEEEEEecc
Q 005071 366 KCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEGVVMA 445 (715)
Q Consensus 366 kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~~KAeaaa~~L~~inP~v~v~~~~~~ 445 (715)
||+|+|+|.+|..+|+.|...|. .++++|.+ ..+++.+++. .++. .+..+
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~-~v~vid~~----------------------~~~~~~l~~~-----~~~~--~i~gd 51 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKY-GVVIINKD----------------------RELCEEFAKK-----LKAT--IIHGD 51 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTC-CEEEEESC----------------------HHHHHHHHHH-----SSSE--EEESC
T ss_pred EEEEECCCHHHHHHHHHHHhCCC-eEEEEECC----------------------HHHHHHHHHH-----cCCe--EEEcC
Confidence 79999999999999999999996 78888862 1133332221 1233 23321
Q ss_pred cCCCCCCCCCccccccccchhhHHHh-hccCCEEEEeCCChHHHHHHHHHHHh-cCCe
Q 005071 446 IPMPGHPVPCQEEDSVLDDCRRLTDL-ILSHDVIFLLTDTRESRWLPTLLCAN-TNKI 501 (715)
Q Consensus 446 Ipmpgh~~~~~~~~~~~~~~~~l~~l-i~~~DvV~~~tDs~esR~li~~~~~~-~~kp 501 (715)
. .+.+.+.+. ++++|+||.++++.+...++...++. .+.+
T Consensus 52 ~----------------~~~~~l~~a~i~~ad~vi~~~~~d~~n~~~~~~a~~~~~~~ 93 (218)
T 3l4b_C 52 G----------------SHKEILRDAEVSKNDVVVILTPRDEVNLFIAQLVMKDFGVK 93 (218)
T ss_dssp T----------------TSHHHHHHHTCCTTCEEEECCSCHHHHHHHHHHHHHTSCCC
T ss_pred C----------------CCHHHHHhcCcccCCEEEEecCCcHHHHHHHHHHHHHcCCC
Confidence 1 234445444 78999999999999888888888776 4443
No 46
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=96.43 E-value=0.016 Score=60.04 Aligned_cols=87 Identities=17% Similarity=0.224 Sum_probs=65.0
Q ss_pred HHhhccCeEEEEcC-ChHHHHHHHHHHHhcCC--eEEEEeCCcccccCCCcCCCCCcchhcCCCCcHHHHHHHHHHhhCC
Q 005071 359 LDILSSRKCLLLGA-GTLGCQVARMLMAWGVR--KITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFP 435 (715)
Q Consensus 359 q~kL~~~kVlIvGa-GgLGs~VA~~La~~GVg--~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~~KAeaaa~~L~~inP 435 (715)
...|++++|+|.|+ ||+|..+|+.|++.|.+ ++.++|.+ ..+.+.+++.+.+.+|
T Consensus 28 ~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~----------------------~~~~~~~~~~l~~~~~ 85 (287)
T 3rku_A 28 AERLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARR----------------------LEKLEELKKTIDQEFP 85 (287)
T ss_dssp HHHHTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESC----------------------HHHHHHHHHHHHHHCT
T ss_pred hhhcCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECC----------------------HHHHHHHHHHHHhhCC
Confidence 35688999999985 79999999999999875 78887752 2356777888888888
Q ss_pred CcEEEEEecccCCCCCCCCCccccccccchhhHHHhh-------ccCCEEEEeCC
Q 005071 436 AVAAEGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLI-------LSHDVIFLLTD 483 (715)
Q Consensus 436 ~v~v~~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li-------~~~DvV~~~tD 483 (715)
+.++..+..++ .+.+.+.+++ ...|+||.+..
T Consensus 86 ~~~~~~~~~Dv----------------~d~~~v~~~~~~~~~~~g~iD~lVnnAG 124 (287)
T 3rku_A 86 NAKVHVAQLDI----------------TQAEKIKPFIENLPQEFKDIDILVNNAG 124 (287)
T ss_dssp TCEEEEEECCT----------------TCGGGHHHHHHTSCGGGCSCCEEEECCC
T ss_pred CCeEEEEECCC----------------CCHHHHHHHHHHHHHhcCCCCEEEECCC
Confidence 88888888765 2333333333 35799998764
No 47
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=96.37 E-value=0.031 Score=51.36 Aligned_cols=88 Identities=14% Similarity=0.144 Sum_probs=57.4
Q ss_pred cCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeCCcccccCCCcCCCCCcchhcCCCCcHHHHHHHHHHhhCCCcEEEEEe
Q 005071 364 SRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEGVV 443 (715)
Q Consensus 364 ~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~~KAeaaa~~L~~inP~v~v~~~~ 443 (715)
..+|+|+|+|.+|..+|+.|...|. .++++|.|. .+++.+ ++ .++.+ +.
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~-~v~vid~~~----------------------~~~~~~----~~--~g~~~--i~ 55 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDI-PLVVIETSR----------------------TRVDEL----RE--RGVRA--VL 55 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTC-CEEEEESCH----------------------HHHHHH----HH--TTCEE--EE
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCC-CEEEEECCH----------------------HHHHHH----HH--cCCCE--EE
Confidence 4589999999999999999999996 788888732 122222 22 23433 32
Q ss_pred cccCCCCCCCCCccccccccchhhHHHh-hccCCEEEEeCCChHHHHHHHHHHHhc
Q 005071 444 MAIPMPGHPVPCQEEDSVLDDCRRLTDL-ILSHDVIFLLTDTRESRWLPTLLCANT 498 (715)
Q Consensus 444 ~~Ipmpgh~~~~~~~~~~~~~~~~l~~l-i~~~DvV~~~tDs~esR~li~~~~~~~ 498 (715)
.+. .+.+.+.+. ++++|+||.++++.+.-..+...++..
T Consensus 56 gd~----------------~~~~~l~~a~i~~ad~vi~~~~~~~~n~~~~~~a~~~ 95 (140)
T 3fwz_A 56 GNA----------------ANEEIMQLAHLECAKWLILTIPNGYEAGEIVASARAK 95 (140)
T ss_dssp SCT----------------TSHHHHHHTTGGGCSEEEECCSCHHHHHHHHHHHHHH
T ss_pred CCC----------------CCHHHHHhcCcccCCEEEEECCChHHHHHHHHHHHHH
Confidence 211 123334332 678999999999877555455555554
No 48
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=96.22 E-value=0.0086 Score=66.51 Aligned_cols=35 Identities=23% Similarity=0.376 Sum_probs=30.7
Q ss_pred ccCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeCCc
Q 005071 363 SSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGR 398 (715)
Q Consensus 363 ~~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~D~ 398 (715)
+.++|+|+|+|++|..+++.|+..|. +++++|.+.
T Consensus 2 ~~k~VlViGaG~iG~~ia~~L~~~G~-~V~v~~R~~ 36 (450)
T 1ff9_A 2 ATKSVLMLGSGFVTRPTLDVLTDSGI-KVTVACRTL 36 (450)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHTTTC-EEEEEESSH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCcC-EEEEEECCH
Confidence 46789999999999999999999995 599988753
No 49
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=96.20 E-value=0.013 Score=63.00 Aligned_cols=35 Identities=26% Similarity=0.568 Sum_probs=32.4
Q ss_pred hhccCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 361 ILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 361 kL~~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
.++..+|+|+|+|++|..+++.|.+.|. +++++|.
T Consensus 164 ~l~~~~VlViGaGgvG~~aa~~a~~~Ga-~V~v~dr 198 (361)
T 1pjc_A 164 GVKPGKVVILGGGVVGTEAAKMAVGLGA-QVQIFDI 198 (361)
T ss_dssp TBCCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeC
Confidence 4778999999999999999999999999 8999876
No 50
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=96.19 E-value=0.014 Score=65.21 Aligned_cols=99 Identities=13% Similarity=0.192 Sum_probs=67.5
Q ss_pred cCeEEEEcCChHHHHHHHHHHHhc-C--CeEEEEeCCcccccCCCcCCCCCcchhcCCCCcHHHHHHHHHHhhCCCcEEE
Q 005071 364 SRKCLLLGAGTLGCQVARMLMAWG-V--RKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAE 440 (715)
Q Consensus 364 ~~kVlIvGaGgLGs~VA~~La~~G-V--g~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~~KAeaaa~~L~~inP~v~v~ 440 (715)
..||+|||+|++|+.+|+.|++-+ + ..|+++|.+.. ++.. .+.+ ++++.
T Consensus 13 ~~rVlIIGaGgVG~~va~lla~~~dv~~~~I~vaD~~~~-------------------~~~~----~~~~-----g~~~~ 64 (480)
T 2ph5_A 13 KNRFVILGFGCVGQALMPLIFEKFDIKPSQVTIIAAEGT-------------------KVDV----AQQY-----GVSFK 64 (480)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHHBCCCGGGEEEEESSCC-------------------SCCH----HHHH-----TCEEE
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCCceeEEEEeccchh-------------------hhhH----Hhhc-----CCcee
Confidence 468999999999999999999964 5 58999986442 2211 1111 34554
Q ss_pred EEecccCCCCCCCCCccccccccchhh-HHHhhccCCEEEEeCCChHHHHHHHHHHHhcCCeEEEeee
Q 005071 441 GVVMAIPMPGHPVPCQEEDSVLDDCRR-LTDLILSHDVIFLLTDTRESRWLPTLLCANTNKITITAAL 507 (715)
Q Consensus 441 ~~~~~Ipmpgh~~~~~~~~~~~~~~~~-l~~li~~~DvV~~~tDs~esR~li~~~~~~~~kp~I~aal 507 (715)
.... + ..+.+. +..++++.|+||++.....+ .-+-++|.+.|.-+|+.+.
T Consensus 65 ~~~V---------d-------adnv~~~l~aLl~~~DvVIN~s~~~~~-l~Im~acleaGv~YlDTa~ 115 (480)
T 2ph5_A 65 LQQI---------T-------PQNYLEVIGSTLEENDFLIDVSIGISS-LALIILCNQKGALYINAAT 115 (480)
T ss_dssp ECCC---------C-------TTTHHHHTGGGCCTTCEEEECCSSSCH-HHHHHHHHHHTCEEEESSC
T ss_pred EEec---------c-------chhHHHHHHHHhcCCCEEEECCccccC-HHHHHHHHHcCCCEEECCC
Confidence 4432 1 123323 44577778999998876655 3466799999999998764
No 51
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=96.18 E-value=0.0038 Score=64.54 Aligned_cols=34 Identities=29% Similarity=0.418 Sum_probs=31.6
Q ss_pred hccCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 362 LSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 362 L~~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
+++++|+|||+|+.|..+|+.|...|+ +++++|.
T Consensus 127 ~~~~~v~iiGaG~~g~aia~~L~~~g~-~V~v~~r 160 (275)
T 2hk9_A 127 VKEKSILVLGAGGASRAVIYALVKEGA-KVFLWNR 160 (275)
T ss_dssp GGGSEEEEECCSHHHHHHHHHHHHHTC-EEEEECS
T ss_pred cCCCEEEEECchHHHHHHHHHHHHcCC-EEEEEEC
Confidence 678899999999999999999999998 9999875
No 52
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=96.17 E-value=0.012 Score=59.61 Aligned_cols=92 Identities=14% Similarity=0.181 Sum_probs=60.3
Q ss_pred ccCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeCCcccccCCCcCCCCCcchhcCCCCcHHHHHHHHHHhhCCCcEEEEE
Q 005071 363 SSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEGV 442 (715)
Q Consensus 363 ~~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~~KAeaaa~~L~~inP~v~v~~~ 442 (715)
...||.|||+|.+|+.+|+.|++.|...++++|.+ ..|++.+++.+ ++. ..
T Consensus 9 ~~m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~----------------------~~~~~~~~~~~-----g~~--~~ 59 (266)
T 3d1l_A 9 EDTPIVLIGAGNLATNLAKALYRKGFRIVQVYSRT----------------------EESARELAQKV-----EAE--YT 59 (266)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSS----------------------HHHHHHHHHHT-----TCE--EE
T ss_pred CCCeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCC----------------------HHHHHHHHHHc-----CCc--ee
Confidence 34689999999999999999999997667787742 12333333322 121 11
Q ss_pred ecccCCCCCCCCCccccccccchhhHHHhhccCCEEEEeCCChHHHHHHHHHHHh--cCCeEEEee
Q 005071 443 VMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTRESRWLPTLLCAN--TNKITITAA 506 (715)
Q Consensus 443 ~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~esR~li~~~~~~--~~kp~I~aa 506 (715)
....++++++|+||.|+-+...+-++..+... .+..+|+.+
T Consensus 60 -----------------------~~~~~~~~~~Dvvi~av~~~~~~~v~~~l~~~~~~~~ivv~~s 102 (266)
T 3d1l_A 60 -----------------------TDLAEVNPYAKLYIVSLKDSAFAELLQGIVEGKREEALMVHTA 102 (266)
T ss_dssp -----------------------SCGGGSCSCCSEEEECCCHHHHHHHHHHHHTTCCTTCEEEECC
T ss_pred -----------------------CCHHHHhcCCCEEEEecCHHHHHHHHHHHHhhcCCCcEEEECC
Confidence 11234567899999999877766666655432 456666653
No 53
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=96.13 E-value=0.017 Score=61.14 Aligned_cols=81 Identities=16% Similarity=0.260 Sum_probs=58.4
Q ss_pred hhccCeEEEEcC-ChHHHHHHHHHHHh-cCCeEEEEeCCcccccCCCcCCCCCcchhcCCCCcHHHHHHHHHHhhCCCcE
Q 005071 361 ILSSRKCLLLGA-GTLGCQVARMLMAW-GVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVA 438 (715)
Q Consensus 361 kL~~~kVlIvGa-GgLGs~VA~~La~~-GVg~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~~KAeaaa~~L~~inP~v~ 438 (715)
.+++++|||.|+ |++|+.+++.|+.. |..++++++.+ ..|...+++.+. ...
T Consensus 18 ~~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~----------------------~~~~~~~~~~~~----~~~ 71 (344)
T 2gn4_A 18 MLDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRD----------------------ELKQSEMAMEFN----DPR 71 (344)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESC----------------------HHHHHHHHHHHC----CTT
T ss_pred hhCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECC----------------------hhhHHHHHHHhc----CCC
Confidence 467889999995 99999999999999 98889988763 123333333332 123
Q ss_pred EEEEecccCCCCCCCCCccccccccchhhHHHhhccCCEEEEeCC
Q 005071 439 AEGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTD 483 (715)
Q Consensus 439 v~~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tD 483 (715)
++.+..++ .+.+.+.+++++.|+||.+..
T Consensus 72 v~~~~~Dl----------------~d~~~l~~~~~~~D~Vih~Aa 100 (344)
T 2gn4_A 72 MRFFIGDV----------------RDLERLNYALEGVDICIHAAA 100 (344)
T ss_dssp EEEEECCT----------------TCHHHHHHHTTTCSEEEECCC
T ss_pred EEEEECCC----------------CCHHHHHHHHhcCCEEEECCC
Confidence 45555444 356777888899999999875
No 54
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=96.06 E-value=0.024 Score=55.27 Aligned_cols=97 Identities=22% Similarity=0.166 Sum_probs=59.8
Q ss_pred eEEEEc-CChHHHHHHHHHHHhcCCeEEEEeCCcccccCCCcCCCCCcchhcCCCCcHHHHHHHHHHhhCCCcEEEEEec
Q 005071 366 KCLLLG-AGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEGVVM 444 (715)
Q Consensus 366 kVlIvG-aGgLGs~VA~~La~~GVg~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~~KAeaaa~~L~~inP~v~v~~~~~ 444 (715)
||+|+| +|.+|+.+++.|++.|. +++++|.+. .|++.+++.+....+...+.
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~-~V~~~~r~~----------------------~~~~~~~~~~~~~~~~~~~~---- 54 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGH-EIVVGSRRE----------------------EKAEAKAAEYRRIAGDASIT---- 54 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTC-EEEEEESSH----------------------HHHHHHHHHHHHHHSSCCEE----
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCC-EEEEEeCCH----------------------HHHHHHHHHhccccccCCCC----
Confidence 799999 99999999999999995 688877521 12222222221110100111
Q ss_pred ccCCCCCCCCCccccccccchhhHHHhhccCCEEEEeCCChHHHHHHHHHHH-hcCCeEEEeeeCC
Q 005071 445 AIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTRESRWLPTLLCA-NTNKITITAALGF 509 (715)
Q Consensus 445 ~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~esR~li~~~~~-~~~kp~I~aalG~ 509 (715)
...+.+.++++|+||.|+-....+.++..+.. ..++.+|+.+-|+
T Consensus 55 --------------------~~~~~~~~~~~D~Vi~~~~~~~~~~~~~~l~~~~~~~~vi~~~~g~ 100 (212)
T 1jay_A 55 --------------------GMKNEDAAEACDIAVLTIPWEHAIDTARDLKNILREKIVVSPLVPV 100 (212)
T ss_dssp --------------------EEEHHHHHHHCSEEEECSCHHHHHHHHHHTHHHHTTSEEEECCCCE
T ss_pred --------------------hhhHHHHHhcCCEEEEeCChhhHHHHHHHHHHHcCCCEEEEcCCCc
Confidence 12344567889999999987666655554432 1377788765443
No 55
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=95.98 E-value=0.026 Score=57.26 Aligned_cols=84 Identities=18% Similarity=0.285 Sum_probs=61.0
Q ss_pred hhccCeEEEEcC-ChHHHHHHHHHHHhcCCeEEEEeCCcccccCCCcCCCCCcchhcCCCCcHHHHHHHHHHhhCCCcEE
Q 005071 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAA 439 (715)
Q Consensus 361 kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~~KAeaaa~~L~~inP~v~v 439 (715)
++++++|+|.|+ ||+|..+|+.|++.|. ++.++|.+ ..+.+.+++.+.+.++...+
T Consensus 7 ~l~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r~----------------------~~~~~~~~~~l~~~~~~~~~ 63 (267)
T 3t4x_A 7 QLKGKTALVTGSTAGIGKAIATSLVAEGA-NVLINGRR----------------------EENVNETIKEIRAQYPDAIL 63 (267)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESS----------------------HHHHHHHHHHHHHHCTTCEE
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCC----------------------HHHHHHHHHHHHhhCCCceE
Confidence 367889999985 7999999999999996 57776652 23556677788888888888
Q ss_pred EEEecccCCCCCCCCCccccccccchhhHHHhh---ccCCEEEEeCC
Q 005071 440 EGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLI---LSHDVIFLLTD 483 (715)
Q Consensus 440 ~~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li---~~~DvV~~~tD 483 (715)
..+..++ .+.+.+.+++ ...|++|.+..
T Consensus 64 ~~~~~D~----------------~~~~~~~~~~~~~g~id~lv~nAg 94 (267)
T 3t4x_A 64 QPVVADL----------------GTEQGCQDVIEKYPKVDILINNLG 94 (267)
T ss_dssp EEEECCT----------------TSHHHHHHHHHHCCCCSEEEECCC
T ss_pred EEEecCC----------------CCHHHHHHHHHhcCCCCEEEECCC
Confidence 8877654 1233344444 46799998764
No 56
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=95.97 E-value=0.066 Score=55.75 Aligned_cols=86 Identities=16% Similarity=0.202 Sum_probs=55.6
Q ss_pred HhhccCeEEEEcC-ChHHHHHHHHHHHhcCCeEEEEeCCcccccCCCcCCCCCcchhcCCCCcHHHHHHHHHHhhCCC--
Q 005071 360 DILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPA-- 436 (715)
Q Consensus 360 ~kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~~KAeaaa~~L~~inP~-- 436 (715)
..++.++|||.|+ |.+|+.+++.|+..| -+++.+|...- +. ....+.+....+.
T Consensus 21 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~-------------------~~---~~~~~~~~~~~~~~~ 77 (351)
T 3ruf_A 21 LIFSPKTWLITGVAGFIGSNLLEKLLKLN-QVVIGLDNFST-------------------GH---QYNLDEVKTLVSTEQ 77 (351)
T ss_dssp HHHSCCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECCSS-------------------CC---HHHHHHHHHTSCHHH
T ss_pred CCCCCCeEEEECCCcHHHHHHHHHHHHCC-CEEEEEeCCCC-------------------Cc---hhhhhhhhhcccccc
Confidence 3467889999995 899999999999999 46777765321 00 0111222222110
Q ss_pred -cEEEEEecccCCCCCCCCCccccccccchhhHHHhhccCCEEEEeCCC
Q 005071 437 -VAAEGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDT 484 (715)
Q Consensus 437 -v~v~~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs 484 (715)
-.++.+..++ .+.+.+.++++++|+||.+...
T Consensus 78 ~~~~~~~~~Dl----------------~d~~~~~~~~~~~d~Vih~A~~ 110 (351)
T 3ruf_A 78 WSRFCFIEGDI----------------RDLTTCEQVMKGVDHVLHQAAL 110 (351)
T ss_dssp HTTEEEEECCT----------------TCHHHHHHHTTTCSEEEECCCC
T ss_pred CCceEEEEccC----------------CCHHHHHHHhcCCCEEEECCcc
Confidence 2344455443 3567788889999999999863
No 57
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=95.95 E-value=0.043 Score=55.78 Aligned_cols=85 Identities=14% Similarity=0.098 Sum_probs=57.1
Q ss_pred HhhccCeEEEEc-CChHHHHHHHHHHHhcCCeEEEEeCCcccccCCCcCCCCCcchhcCCCCcHHHHHHHHHHhhCCCcE
Q 005071 360 DILSSRKCLLLG-AGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVA 438 (715)
Q Consensus 360 ~kL~~~kVlIvG-aGgLGs~VA~~La~~GVg~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~~KAeaaa~~L~~inP~v~ 438 (715)
..+++++|+|.| .||+|..+|+.|+..|. +++++|.+ ..+.+.+++.+++......
T Consensus 28 ~~l~~k~vlVTGasggIG~~la~~l~~~G~-~V~~~~r~----------------------~~~~~~~~~~~~~~~~~~~ 84 (279)
T 1xg5_A 28 ERWRDRLALVTGASGGIGAAVARALVQQGL-KVVGCART----------------------VGNIEELAAECKSAGYPGT 84 (279)
T ss_dssp GGGTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESC----------------------HHHHHHHHHHHHHTTCSSE
T ss_pred cccCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEECC----------------------hHHHHHHHHHHHhcCCCce
Confidence 457889999997 58999999999999996 57776652 1234455566666554456
Q ss_pred EEEEecccCCCCCCCCCccccccccchhhHHHhh-------ccCCEEEEeCC
Q 005071 439 AEGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLI-------LSHDVIFLLTD 483 (715)
Q Consensus 439 v~~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li-------~~~DvV~~~tD 483 (715)
+..+..++ .+.+.+.+++ ...|+||.+..
T Consensus 85 ~~~~~~Dl----------------~~~~~v~~~~~~~~~~~g~iD~vi~~Ag 120 (279)
T 1xg5_A 85 LIPYRCDL----------------SNEEDILSMFSAIRSQHSGVDICINNAG 120 (279)
T ss_dssp EEEEECCT----------------TCHHHHHHHHHHHHHHHCCCSEEEECCC
T ss_pred EEEEEecC----------------CCHHHHHHHHHHHHHhCCCCCEEEECCC
Confidence 66666554 2233333333 37899998764
No 58
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=95.93 E-value=0.014 Score=60.12 Aligned_cols=34 Identities=26% Similarity=0.311 Sum_probs=31.6
Q ss_pred hccCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 362 LSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 362 L~~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
+++++|+|+|+||.|..++..|++.| .++++++.
T Consensus 117 ~~~~~vlvlGaGg~g~a~a~~L~~~G-~~v~v~~R 150 (272)
T 1p77_A 117 RPNQHVLILGAGGATKGVLLPLLQAQ-QNIVLANR 150 (272)
T ss_dssp CTTCEEEEECCSHHHHTTHHHHHHTT-CEEEEEES
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCC-CEEEEEEC
Confidence 56889999999999999999999999 89999876
No 59
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=95.92 E-value=0.011 Score=60.80 Aligned_cols=34 Identities=24% Similarity=0.307 Sum_probs=31.2
Q ss_pred hccCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 362 LSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 362 L~~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
+++++|+|+|+||+|..+++.|++.| .+++++|.
T Consensus 117 l~~k~vlViGaGg~g~a~a~~L~~~G-~~V~v~~R 150 (271)
T 1nyt_A 117 RPGLRILLIGAGGASRGVLLPLLSLD-CAVTITNR 150 (271)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTT-CEEEEECS
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHcC-CEEEEEEC
Confidence 56889999999999999999999999 79999765
No 60
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=95.91 E-value=0.06 Score=51.17 Aligned_cols=33 Identities=24% Similarity=0.360 Sum_probs=29.2
Q ss_pred cCeEEEEcC-ChHHHHHHHHHHHhcCCeEEEEeCC
Q 005071 364 SRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNG 397 (715)
Q Consensus 364 ~~kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD~D 397 (715)
.++|+|+|+ |++|..+++.|+..| -++++++.+
T Consensus 3 ~~~ilVtGatG~iG~~l~~~l~~~g-~~V~~~~r~ 36 (206)
T 1hdo_A 3 VKKIAIFGATGQTGLTTLAQAVQAG-YEVTVLVRD 36 (206)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTT-CEEEEEESC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEEeC
Confidence 468999998 999999999999999 578888864
No 61
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=95.88 E-value=0.025 Score=57.05 Aligned_cols=63 Identities=14% Similarity=0.127 Sum_probs=45.7
Q ss_pred hhccCeEEEEcC-ChHHHHHHHHHHHhcCCeEEEEeCCcccccCCCcCCCCCcchhcCCCCcHHHHHHHHHHhhCCC-cE
Q 005071 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPA-VA 438 (715)
Q Consensus 361 kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~~KAeaaa~~L~~inP~-v~ 438 (715)
.+++++|+|.|+ ||+|..+|+.|++.|. ++.++|.+ ..+.+.+++.+.+.++. .+
T Consensus 4 ~~~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~----------------------~~~~~~~~~~~~~~~~~~~~ 60 (250)
T 3nyw_A 4 EKQKGLAIITGASQGIGAVIAAGLATDGY-RVVLIARS----------------------KQNLEKVHDEIMRSNKHVQE 60 (250)
T ss_dssp -CCCCEEEEESTTSHHHHHHHHHHHHHTC-EEEEEESC----------------------HHHHHHHHHHHHHHCTTSCC
T ss_pred cCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECC----------------------HHHHHHHHHHHHHhccccCc
Confidence 356789999985 8999999999999997 68887752 23556666777777655 55
Q ss_pred EEEEeccc
Q 005071 439 AEGVVMAI 446 (715)
Q Consensus 439 v~~~~~~I 446 (715)
+..+..++
T Consensus 61 ~~~~~~Dv 68 (250)
T 3nyw_A 61 PIVLPLDI 68 (250)
T ss_dssp CEEEECCT
T ss_pred ceEEeccC
Confidence 56665544
No 62
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=95.88 E-value=0.023 Score=58.78 Aligned_cols=92 Identities=17% Similarity=0.168 Sum_probs=60.5
Q ss_pred ccCeEEEEcCChHHHHHHHHHHHhcC--CeEEEEeCCcccccCCCcCCCCCcchhcCCCCcHHHHHHHHHHhhCCCcEEE
Q 005071 363 SSRKCLLLGAGTLGCQVARMLMAWGV--RKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAE 440 (715)
Q Consensus 363 ~~~kVlIvGaGgLGs~VA~~La~~GV--g~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~~KAeaaa~~L~~inP~v~v~ 440 (715)
+..||.|||+|..|+.+++.|++.|+ .+++++|.+ ..|++.+++. + ++.
T Consensus 2 ~~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~----------------------~~~~~~l~~~----~-gi~-- 52 (280)
T 3tri_A 2 NTSNITFIGGGNMARNIVVGLIANGYDPNRICVTNRS----------------------LDKLDFFKEK----C-GVH-- 52 (280)
T ss_dssp CCSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSS----------------------SHHHHHHHHT----T-CCE--
T ss_pred CCCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCC----------------------HHHHHHHHHH----c-CCE--
Confidence 35689999999999999999999996 368887652 2234333332 1 121
Q ss_pred EEecccCCCCCCCCCccccccccchhhHHHhhccCCEEEEeCCChHHHHHHHHHHHh---cCCeEEEee
Q 005071 441 GVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTRESRWLPTLLCAN---TNKITITAA 506 (715)
Q Consensus 441 ~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~esR~li~~~~~~---~~kp~I~aa 506 (715)
.. ....+.++++|+||.|+-....+-++..+... .+..+|+.+
T Consensus 53 ~~-----------------------~~~~~~~~~aDvVilav~p~~~~~vl~~l~~~~l~~~~iiiS~~ 98 (280)
T 3tri_A 53 TT-----------------------QDNRQGALNADVVVLAVKPHQIKMVCEELKDILSETKILVISLA 98 (280)
T ss_dssp EE-----------------------SCHHHHHSSCSEEEECSCGGGHHHHHHHHHHHHHTTTCEEEECC
T ss_pred Ee-----------------------CChHHHHhcCCeEEEEeCHHHHHHHHHHHHhhccCCCeEEEEec
Confidence 11 12345678999999999766666666666532 344677643
No 63
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=95.83 E-value=0.015 Score=60.70 Aligned_cols=37 Identities=32% Similarity=0.480 Sum_probs=33.6
Q ss_pred hhccCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeCCc
Q 005071 361 ILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGR 398 (715)
Q Consensus 361 kL~~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~D~ 398 (715)
.|++++|||||+|-+|...++.|...| .++++||.+.
T Consensus 10 ~l~~k~VLVVGgG~va~rka~~Ll~~G-a~VtViap~~ 46 (274)
T 1kyq_A 10 QLKDKRILLIGGGEVGLTRLYKLMPTG-CKLTLVSPDL 46 (274)
T ss_dssp CCTTCEEEEEEESHHHHHHHHHHGGGT-CEEEEEEEEE
T ss_pred EcCCCEEEEECCcHHHHHHHHHHHhCC-CEEEEEcCCC
Confidence 468999999999999999999999999 5699999854
No 64
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=95.83 E-value=0.023 Score=60.60 Aligned_cols=37 Identities=22% Similarity=0.373 Sum_probs=32.1
Q ss_pred hhccCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeCC
Q 005071 361 ILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNG 397 (715)
Q Consensus 361 kL~~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~D 397 (715)
+++..||.|+|+|.+|+.+|..|+..|.++++|+|-+
T Consensus 4 ~m~~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~ 40 (324)
T 3gvi_A 4 SMARNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIA 40 (324)
T ss_dssp --CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred CCcCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCC
Confidence 4667899999999999999999999998889998863
No 65
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=95.80 E-value=0.022 Score=61.33 Aligned_cols=36 Identities=28% Similarity=0.583 Sum_probs=32.9
Q ss_pred HhhccCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 360 DILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 360 ~kL~~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
..++.++|+|+|+|++|..+++.|.+.|. +++++|.
T Consensus 162 ~~l~~~~V~ViGaG~iG~~~a~~l~~~Ga-~V~~~d~ 197 (369)
T 2eez_A 162 PGVAPASVVILGGGTVGTNAAKIALGMGA-QVTILDV 197 (369)
T ss_dssp TBBCCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEEC
Confidence 35888999999999999999999999998 8998875
No 66
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=95.80 E-value=0.037 Score=58.09 Aligned_cols=35 Identities=20% Similarity=0.233 Sum_probs=31.0
Q ss_pred ccCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeCC
Q 005071 363 SSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNG 397 (715)
Q Consensus 363 ~~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~D 397 (715)
...||.|||+|.+|+.+|+.|++.|..+++++|.+
T Consensus 23 ~~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~ 57 (312)
T 3qsg_A 23 NAMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAA 57 (312)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSS
T ss_pred CCCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCC
Confidence 34689999999999999999999998799999985
No 67
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=95.78 E-value=0.029 Score=56.62 Aligned_cols=62 Identities=21% Similarity=0.272 Sum_probs=44.6
Q ss_pred hhccCeEEEEcC-C-hHHHHHHHHHHHhcCCeEEEEeCCcccccCCCcCCCCCcchhcCCCCcHHHHHHHHHHhhCCCcE
Q 005071 361 ILSSRKCLLLGA-G-TLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVA 438 (715)
Q Consensus 361 kL~~~kVlIvGa-G-gLGs~VA~~La~~GVg~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~~KAeaaa~~L~~inP~v~ 438 (715)
.+++++|+|.|+ | |+|..+|+.|++.|.. +.++|.+ ..+.+.+++.+++.. ..+
T Consensus 19 ~l~~k~vlITGasg~GIG~~~a~~l~~~G~~-V~~~~r~----------------------~~~~~~~~~~l~~~~-~~~ 74 (266)
T 3o38_A 19 LLKGKVVLVTAAAGTGIGSTTARRALLEGAD-VVISDYH----------------------ERRLGETRDQLADLG-LGR 74 (266)
T ss_dssp TTTTCEEEESSCSSSSHHHHHHHHHHHTTCE-EEEEESC----------------------HHHHHHHHHHHHTTC-SSC
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHHCCCE-EEEecCC----------------------HHHHHHHHHHHHhcC-CCc
Confidence 478899999999 7 8999999999999964 7777752 224455566665543 345
Q ss_pred EEEEeccc
Q 005071 439 AEGVVMAI 446 (715)
Q Consensus 439 v~~~~~~I 446 (715)
+..+..++
T Consensus 75 ~~~~~~Dl 82 (266)
T 3o38_A 75 VEAVVCDV 82 (266)
T ss_dssp EEEEECCT
T ss_pred eEEEEeCC
Confidence 66666554
No 68
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=95.77 E-value=0.026 Score=56.97 Aligned_cols=111 Identities=21% Similarity=0.162 Sum_probs=63.2
Q ss_pred HhhccCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeCCcccccCCCcCCCCCcchhcCCCCcHHHHHHHHHHhhCCCcEE
Q 005071 360 DILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAA 439 (715)
Q Consensus 360 ~kL~~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~~KAeaaa~~L~~inP~v~v 439 (715)
..+...||.|||+|..|..+|+.|++.|. +++++|.+.=. .+.+. ..... +...++ .+.+..+.+.
T Consensus 15 ~~~~~~kIgiIG~G~mG~alA~~L~~~G~-~V~~~~r~~~~--~~~~~---~~~~~---~~~~~~----~~~~~~~~~~- 80 (245)
T 3dtt_A 15 LYFQGMKIAVLGTGTVGRTMAGALADLGH-EVTIGTRDPKA--TLARA---EPDAM---GAPPFS----QWLPEHPHVH- 80 (245)
T ss_dssp ----CCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHH--HHTCC-------------CCHH----HHGGGSTTCE-
T ss_pred cccCCCeEEEECCCHHHHHHHHHHHHCCC-EEEEEeCChhh--hhhhh---hhhhh---cchhhh----HHHhhcCcee-
Confidence 57889999999999999999999999995 78888864210 00000 00011 111111 2222222221
Q ss_pred EEEecccCCCCCCCCCccccccccchhhHHHhhccCCEEEEeCCChHHHHHHHHH-H-HhcCCeEEEeeeCC
Q 005071 440 EGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTRESRWLPTLL-C-ANTNKITITAALGF 509 (715)
Q Consensus 440 ~~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~esR~li~~~-~-~~~~kp~I~aalG~ 509 (715)
.....+.++++|+||.|+-....+-.+..+ . ...++.+|+.+.|+
T Consensus 81 -------------------------~~~~~e~~~~aDvVilavp~~~~~~~~~~i~~~~l~g~ivi~~s~~~ 127 (245)
T 3dtt_A 81 -------------------------LAAFADVAAGAELVVNATEGASSIAALTAAGAENLAGKILVDIANPL 127 (245)
T ss_dssp -------------------------EEEHHHHHHHCSEEEECSCGGGHHHHHHHHCHHHHTTSEEEECCCCE
T ss_pred -------------------------ccCHHHHHhcCCEEEEccCcHHHHHHHHHhhhhhcCCCEEEECCCCC
Confidence 122345678899999999877666555443 1 23677888876443
No 69
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=95.77 E-value=0.044 Score=55.45 Aligned_cols=84 Identities=21% Similarity=0.212 Sum_probs=57.4
Q ss_pred hhccCeEEEEc-CChHHHHHHHHHHHhcCCeEEEEeCCcccccCCCcCCCCCcchhcCCCCcHHHHHHHHHHhhCCCcEE
Q 005071 361 ILSSRKCLLLG-AGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAA 439 (715)
Q Consensus 361 kL~~~kVlIvG-aGgLGs~VA~~La~~GVg~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~~KAeaaa~~L~~inP~v~v 439 (715)
.+++++|+|.| .||+|..+|+.|++.|. ++.++|.+ ..+.+.+++.+.+..+..++
T Consensus 10 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~----------------------~~~~~~~~~~~~~~~~~~~~ 66 (267)
T 1iy8_A 10 RFTDRVVLITGGGSGLGRATAVRLAAEGA-KLSLVDVS----------------------SEGLEASKAAVLETAPDAEV 66 (267)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESC----------------------HHHHHHHHHHHHHHCTTCCE
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCC----------------------HHHHHHHHHHHHhhcCCceE
Confidence 46788999997 67999999999999996 57776652 22445556667666666667
Q ss_pred EEEecccCCCCCCCCCccccccccchhhHHHhh-------ccCCEEEEeCC
Q 005071 440 EGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLI-------LSHDVIFLLTD 483 (715)
Q Consensus 440 ~~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li-------~~~DvV~~~tD 483 (715)
..+..++ .+.+.+.+++ ...|+||.+..
T Consensus 67 ~~~~~D~----------------~~~~~v~~~~~~~~~~~g~id~lv~nAg 101 (267)
T 1iy8_A 67 LTTVADV----------------SDEAQVEAYVTATTERFGRIDGFFNNAG 101 (267)
T ss_dssp EEEECCT----------------TSHHHHHHHHHHHHHHHSCCSEEEECCC
T ss_pred EEEEccC----------------CCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 7776554 2233333333 36799998763
No 70
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=95.73 E-value=0.024 Score=58.85 Aligned_cols=34 Identities=18% Similarity=0.344 Sum_probs=31.7
Q ss_pred ccCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 363 SSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 363 ~~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
.+++|+|+|+||.|..++..|...|+++|++++.
T Consensus 118 ~~~~vlvlGaGgaarav~~~L~~~G~~~i~v~nR 151 (271)
T 1npy_A 118 KNAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYAR 151 (271)
T ss_dssp TTSCEEEECSSTTHHHHHHHHHHTTCCCEEEECS
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeC
Confidence 3679999999999999999999999999999876
No 71
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=95.66 E-value=0.035 Score=56.27 Aligned_cols=91 Identities=14% Similarity=0.134 Sum_probs=59.7
Q ss_pred hhccCeEEEEc-CChHHHHHHHHHHHhcCCeEEEEeCCcccccCCCcCCCCCcchhcCCCCcHHHHHHHHHHhhCCCcEE
Q 005071 361 ILSSRKCLLLG-AGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAA 439 (715)
Q Consensus 361 kL~~~kVlIvG-aGgLGs~VA~~La~~GVg~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~~KAeaaa~~L~~inP~v~v 439 (715)
.+++++|+|.| .||+|..+|+.|++.|. ++.++|.+ ..+.+.+++.+.+.++..++
T Consensus 5 ~l~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~----------------------~~~~~~~~~~l~~~~~~~~~ 61 (265)
T 3lf2_A 5 DLSEAVAVVTGGSSGIGLATVELLLEAGA-AVAFCARD----------------------GERLRAAESALRQRFPGARL 61 (265)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESC----------------------HHHHHHHHHHHHHHSTTCCE
T ss_pred CcCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCC----------------------HHHHHHHHHHHHHhcCCceE
Confidence 36788999998 57999999999999997 47777752 23556677777777777777
Q ss_pred EEEecccCCCCCCCCCccccccccchhhHHHhhccCCEEEEeCC
Q 005071 440 EGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTD 483 (715)
Q Consensus 440 ~~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tD 483 (715)
..+..++ ++ .+....-.+.+.+.+...|++|.+..
T Consensus 62 ~~~~~Dv-------~~--~~~v~~~~~~~~~~~g~id~lvnnAg 96 (265)
T 3lf2_A 62 FASVCDV-------LD--ALQVRAFAEACERTLGCASILVNNAG 96 (265)
T ss_dssp EEEECCT-------TC--HHHHHHHHHHHHHHHCSCSEEEECCC
T ss_pred EEEeCCC-------CC--HHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 7777654 10 11111111222223346799988764
No 72
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=95.65 E-value=0.054 Score=54.54 Aligned_cols=34 Identities=18% Similarity=0.308 Sum_probs=28.9
Q ss_pred hccCeEEEEc-CChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 362 LSSRKCLLLG-AGTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 362 L~~~kVlIvG-aGgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
+++++|+|.| .||+|..+|+.|++.|. +++++|.
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r 39 (260)
T 2z1n_A 5 IQGKLAVVTAGSSGLGFASALELARNGA-RLLLFSR 39 (260)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeC
Confidence 5678899997 57999999999999996 6777765
No 73
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=95.64 E-value=0.022 Score=61.72 Aligned_cols=35 Identities=31% Similarity=0.513 Sum_probs=32.7
Q ss_pred hhccCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 361 ILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 361 kL~~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
.+.+++|+|+|+|++|..+|+.+.+.|. +++.+|.
T Consensus 165 ~l~g~~V~ViG~G~iG~~~a~~a~~~Ga-~V~~~d~ 199 (377)
T 2vhw_A 165 GVEPADVVVIGAGTAGYNAARIANGMGA-TVTVLDI 199 (377)
T ss_dssp TBCCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeC
Confidence 5889999999999999999999999998 8999886
No 74
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=95.62 E-value=0.038 Score=54.95 Aligned_cols=88 Identities=13% Similarity=0.090 Sum_probs=62.2
Q ss_pred cCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeCCcccccCCCcCCCCCcchhcCCCCcHHHHHHHHHHhhCCCcEEEEEe
Q 005071 364 SRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEGVV 443 (715)
Q Consensus 364 ~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~~KAeaaa~~L~~inP~v~v~~~~ 443 (715)
..+|+|+|+|.+|..+|+.|...|. ++++|.+. .+++. +. +++.+ +.
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~~g~--v~vid~~~----------------------~~~~~----~~---~~~~~--i~ 55 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRGSEV--FVLAEDEN----------------------VRKKV----LR---SGANF--VH 55 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTTSEE--EEEESCGG----------------------GHHHH----HH---TTCEE--EE
T ss_pred CCEEEEECCChHHHHHHHHHHhCCe--EEEEECCH----------------------HHHHH----Hh---cCCeE--EE
Confidence 5689999999999999999999997 88888631 12221 22 33333 33
Q ss_pred cccCCCCCCCCCccccccccchhhHHHh-hccCCEEEEeCCChHHHHHHHHHHHhcCC
Q 005071 444 MAIPMPGHPVPCQEEDSVLDDCRRLTDL-ILSHDVIFLLTDTRESRWLPTLLCANTNK 500 (715)
Q Consensus 444 ~~Ipmpgh~~~~~~~~~~~~~~~~l~~l-i~~~DvV~~~tDs~esR~li~~~~~~~~k 500 (715)
.+. .+.+.+.+. ++++|+||.++++.+.-.++...+++.+.
T Consensus 56 gd~----------------~~~~~l~~a~i~~ad~vi~~~~~d~~n~~~~~~a~~~~~ 97 (234)
T 2aef_A 56 GDP----------------TRVSDLEKANVRGARAVIVDLESDSETIHCILGIRKIDE 97 (234)
T ss_dssp SCT----------------TCHHHHHHTTCTTCSEEEECCSCHHHHHHHHHHHHHHCS
T ss_pred cCC----------------CCHHHHHhcCcchhcEEEEcCCCcHHHHHHHHHHHHHCC
Confidence 221 234555554 78999999999998888888888888765
No 75
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A {Vibrio fischeri} PDB: 3pvz_A*
Probab=95.62 E-value=0.047 Score=59.06 Aligned_cols=86 Identities=17% Similarity=0.280 Sum_probs=61.5
Q ss_pred HhhccCeEEEEc-CChHHHHHHHHHHHhcCCeEEEEeCCcccccCCCcCCCCCcchhcCCCCcHHHHHHHHHHhhCC--C
Q 005071 360 DILSSRKCLLLG-AGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFP--A 436 (715)
Q Consensus 360 ~kL~~~kVlIvG-aGgLGs~VA~~La~~GVg~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~~KAeaaa~~L~~inP--~ 436 (715)
..+++++|||.| .|++|+++++.|++.|..+++++|. ...+...+.+.|.+.++ .
T Consensus 31 ~~~~~k~vLVTGatG~IG~~l~~~L~~~g~~~V~~~~r----------------------~~~~~~~~~~~l~~~~~~~~ 88 (399)
T 3nzo_A 31 SVVSQSRFLVLGGAGSIGQAVTKEIFKRNPQKLHVVDI----------------------SENNMVELVRDIRSSFGYIN 88 (399)
T ss_dssp HHHHTCEEEEETTTSHHHHHHHHHHHTTCCSEEEEECS----------------------CHHHHHHHHHHHHHHTCCCS
T ss_pred HHhCCCEEEEEcCChHHHHHHHHHHHHCCCCEEEEEEC----------------------CcchHHHHHHHHHHhcCCCC
Confidence 347789999999 5889999999999999888988875 22344555666666655 3
Q ss_pred cEEEEEecccCCCCCCCCCccccccccchhhHHHhh--ccCCEEEEeCC
Q 005071 437 VAAEGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLI--LSHDVIFLLTD 483 (715)
Q Consensus 437 v~v~~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li--~~~DvV~~~tD 483 (715)
..++.+..++ .+.+.+..++ .+.|+||.+..
T Consensus 89 ~~v~~~~~Dl----------------~d~~~~~~~~~~~~~D~Vih~Aa 121 (399)
T 3nzo_A 89 GDFQTFALDI----------------GSIEYDAFIKADGQYDYVLNLSA 121 (399)
T ss_dssp SEEEEECCCT----------------TSHHHHHHHHHCCCCSEEEECCC
T ss_pred CcEEEEEEeC----------------CCHHHHHHHHHhCCCCEEEECCC
Confidence 5677766554 2334445554 48999998864
No 76
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=95.61 E-value=0.028 Score=58.00 Aligned_cols=82 Identities=17% Similarity=0.167 Sum_probs=53.0
Q ss_pred hccCeEEEEcC-ChHHHHHHHHHHHhcCCeEEEEeCCcccccCCCcCCCCCcchhcCCCCcHHHHHHHHHHhhCCCcEEE
Q 005071 362 LSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAE 440 (715)
Q Consensus 362 L~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~~KAeaaa~~L~~inP~v~v~ 440 (715)
+++++|||.|+ |++|+.+++.|+..|. +++++|.+ ..+.+.+.+.+....+ -.++
T Consensus 9 ~~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~----------------------~~~~~~~~~~~~~~~~-~~~~ 64 (342)
T 1y1p_A 9 PEGSLVLVTGANGFVASHVVEQLLEHGY-KVRGTARS----------------------ASKLANLQKRWDAKYP-GRFE 64 (342)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESS----------------------HHHHHHHHHHHHHHST-TTEE
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHCCC-EEEEEeCC----------------------cccHHHHHHHhhccCC-CceE
Confidence 56789999997 9999999999999995 67766542 1123333444443332 2344
Q ss_pred EE-ecccCCCCCCCCCccccccccchhhHHHhhccCCEEEEeCC
Q 005071 441 GV-VMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTD 483 (715)
Q Consensus 441 ~~-~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tD 483 (715)
.+ ..++ .+.+.+.+++++.|+||.+..
T Consensus 65 ~~~~~D~----------------~d~~~~~~~~~~~d~vih~A~ 92 (342)
T 1y1p_A 65 TAVVEDM----------------LKQGAYDEVIKGAAGVAHIAS 92 (342)
T ss_dssp EEECSCT----------------TSTTTTTTTTTTCSEEEECCC
T ss_pred EEEecCC----------------cChHHHHHHHcCCCEEEEeCC
Confidence 44 3333 234455667778999999874
No 77
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=95.58 E-value=0.059 Score=53.74 Aligned_cols=82 Identities=17% Similarity=0.133 Sum_probs=55.8
Q ss_pred hhccCeEEEEcC-ChHHHHHHHHHHHhcCCeEEEEeCCcccccCCCcCCCCCcchhcCCCCcHHHHHHHHHHhhCCCcEE
Q 005071 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAA 439 (715)
Q Consensus 361 kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~~KAeaaa~~L~~inP~v~v 439 (715)
++++++|+|.|+ ||+|..+|+.|++.|. ++.++|.+ ..+.+.+++.+.+..+ ++
T Consensus 6 ~~~~k~vlITGas~giG~~~a~~l~~~G~-~V~~~~r~----------------------~~~~~~~~~~~~~~~~--~~ 60 (253)
T 3qiv_A 6 RFENKVGIVTGSGGGIGQAYAEALAREGA-AVVVADIN----------------------AEAAEAVAKQIVADGG--TA 60 (253)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESC----------------------HHHHHHHHHHHHHTTC--EE
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCC----------------------HHHHHHHHHHHHhcCC--cE
Confidence 467899999985 8999999999999996 47777652 2345566666666543 55
Q ss_pred EEEecccCCCCCCCCCccccccccchhhHHHhh-------ccCCEEEEeCC
Q 005071 440 EGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLI-------LSHDVIFLLTD 483 (715)
Q Consensus 440 ~~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li-------~~~DvV~~~tD 483 (715)
..+..++ .+.+.+.+++ ...|+||.+..
T Consensus 61 ~~~~~D~----------------~~~~~~~~~~~~~~~~~g~id~li~~Ag 95 (253)
T 3qiv_A 61 ISVAVDV----------------SDPESAKAMADRTLAEFGGIDYLVNNAA 95 (253)
T ss_dssp EEEECCT----------------TSHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred EEEEccC----------------CCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 5555544 2233333333 37899999864
No 78
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=95.57 E-value=0.015 Score=58.55 Aligned_cols=32 Identities=16% Similarity=0.320 Sum_probs=27.9
Q ss_pred CeEEEEcCChHHHHHHHHHHHhcC---CeEEEEeC
Q 005071 365 RKCLLLGAGTLGCQVARMLMAWGV---RKITLLDN 396 (715)
Q Consensus 365 ~kVlIvGaGgLGs~VA~~La~~GV---g~ItLVD~ 396 (715)
.||.|||+|.+|+.+++.|++.|. .+++++|.
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r 37 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDL 37 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECS
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeC
Confidence 589999999999999999999996 46777665
No 79
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Probab=95.56 E-value=0.078 Score=52.98 Aligned_cols=35 Identities=20% Similarity=0.534 Sum_probs=30.8
Q ss_pred hccCeEEEEc-CChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 362 LSSRKCLLLG-AGTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 362 L~~~kVlIvG-aGgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
+++++|+|.| .||+|..+|+.|++.|..++.++|.
T Consensus 3 l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r 38 (254)
T 1sby_A 3 LTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDR 38 (254)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEES
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEec
Confidence 5678999997 5899999999999999887888875
No 80
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=95.56 E-value=0.029 Score=60.38 Aligned_cols=78 Identities=17% Similarity=0.298 Sum_probs=57.2
Q ss_pred hccCeEEEEcCChHHHHHHHHHHH-hcCCeEEEEeCCcccccCCCcCCCCCcchhcCCCCcHHHHHHHHHHhhCCCcEEE
Q 005071 362 LSSRKCLLLGAGTLGCQVARMLMA-WGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAE 440 (715)
Q Consensus 362 L~~~kVlIvGaGgLGs~VA~~La~-~GVg~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~~KAeaaa~~L~~inP~v~v~ 440 (715)
...++|+|||+|+.|...++.|.. .++.+++++|. ...|++.+++.+.. .+++.+.
T Consensus 127 ~~~~~v~iIGaG~~a~~~a~al~~~~~~~~V~V~~r----------------------~~~~a~~la~~~~~-~~g~~~~ 183 (350)
T 1x7d_A 127 PNARKMALIGNGAQSEFQALAFHKHLGIEEIVAYDT----------------------DPLATAKLIANLKE-YSGLTIR 183 (350)
T ss_dssp TTCCEEEEECCSTTHHHHHHHHHHHSCCCEEEEECS----------------------SHHHHHHHHHHHTT-CTTCEEE
T ss_pred ccCCeEEEECCcHHHHHHHHHHHHhCCCcEEEEEcC----------------------CHHHHHHHHHHHHh-ccCceEE
Confidence 357799999999999999999865 47889999875 23467777777654 2344443
Q ss_pred EEecccCCCCCCCCCccccccccchhhHHHhhccCCEEEEeCCCh
Q 005071 441 GVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTR 485 (715)
Q Consensus 441 ~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~ 485 (715)
.+ +.+++.++++|+||.||-+.
T Consensus 184 ~~-----------------------~~~~eav~~aDiVi~aTps~ 205 (350)
T 1x7d_A 184 RA-----------------------SSVAEAVKGVDIITTVTADK 205 (350)
T ss_dssp EC-----------------------SSHHHHHTTCSEEEECCCCS
T ss_pred Ee-----------------------CCHHHHHhcCCEEEEeccCC
Confidence 22 23556778999999999874
No 81
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=95.48 E-value=0.048 Score=54.12 Aligned_cols=35 Identities=20% Similarity=0.346 Sum_probs=29.7
Q ss_pred hhccCeEEEEcC-ChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 361 kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
.+++++|+|.|+ |++|..+++.|+..|. +++++|.
T Consensus 8 ~~~~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r 43 (255)
T 1fmc_A 8 RLDGKCAIITGAGAGIGKEIAITFATAGA-SVVVSDI 43 (255)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHTTTC-EEEEEES
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHCCC-EEEEEcC
Confidence 467889999985 8999999999999996 6777764
No 82
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=95.45 E-value=0.068 Score=52.99 Aligned_cols=35 Identities=26% Similarity=0.442 Sum_probs=29.4
Q ss_pred hhccCeEEEEcC-ChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 361 kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
.+++++|+|.|+ |++|..+++.|+..|. +++++|.
T Consensus 4 ~l~~k~vlVTGasggiG~~~a~~l~~~G~-~V~~~~r 39 (258)
T 3afn_B 4 DLKGKRVLITGSSQGIGLATARLFARAGA-KVGLHGR 39 (258)
T ss_dssp GGTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEECC
Confidence 367789999975 8999999999999996 5777765
No 83
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=95.43 E-value=0.034 Score=57.96 Aligned_cols=35 Identities=23% Similarity=0.432 Sum_probs=32.5
Q ss_pred hhccCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 361 ILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 361 kL~~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
.|.+++|+|||+|.+|..+|+.|.+.|. +++++|.
T Consensus 154 ~l~g~~v~IiG~G~iG~~~a~~l~~~G~-~V~~~d~ 188 (300)
T 2rir_A 154 TIHGSQVAVLGLGRTGMTIARTFAALGA-NVKVGAR 188 (300)
T ss_dssp CSTTSEEEEECCSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCCEEEEEcccHHHHHHHHHHHHCCC-EEEEEEC
Confidence 5789999999999999999999999998 8988886
No 84
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=95.42 E-value=0.053 Score=53.83 Aligned_cols=36 Identities=33% Similarity=0.544 Sum_probs=31.2
Q ss_pred HhhccCeEEEEcC-ChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 360 DILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 360 ~kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
..+++++|+|.|+ ||+|..+|+.|++.|. ++.++|.
T Consensus 10 ~~l~~k~vlITGas~gIG~~ia~~l~~~G~-~V~~~~r 46 (247)
T 3i1j_A 10 ELLKGRVILVTGAARGIGAAAARAYAAHGA-SVVLLGR 46 (247)
T ss_dssp TTTTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred ccCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEec
Confidence 4678999999985 8999999999999997 5778775
No 85
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=95.35 E-value=0.049 Score=53.77 Aligned_cols=36 Identities=14% Similarity=0.305 Sum_probs=28.8
Q ss_pred hhccCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeCC
Q 005071 361 ILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNG 397 (715)
Q Consensus 361 kL~~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~D 397 (715)
++...||.|||+|.+|+.+|..|++.|. +++++|.+
T Consensus 16 ~~~~~~I~iiG~G~mG~~la~~l~~~g~-~V~~~~~~ 51 (209)
T 2raf_A 16 YFQGMEITIFGKGNMGQAIGHNFEIAGH-EVTYYGSK 51 (209)
T ss_dssp ----CEEEEECCSHHHHHHHHHHHHTTC-EEEEECTT
T ss_pred ccCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCC
Confidence 4667899999999999999999999995 68888753
No 86
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=95.34 E-value=0.075 Score=54.25 Aligned_cols=37 Identities=22% Similarity=0.416 Sum_probs=31.8
Q ss_pred HHhhccCeEEEEcC-ChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 359 LDILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 359 q~kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
...+++++|+|.|+ ||+|..+|+.|++.|. +++++|.
T Consensus 23 ~~~~~~k~vlITGasggIG~~la~~l~~~G~-~V~~~~r 60 (286)
T 1xu9_A 23 PEMLQGKKVIVTGASKGIGREMAYHLAKMGA-HVVVTAR 60 (286)
T ss_dssp GGGGTTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred hhhcCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEEC
Confidence 45678899999987 8999999999999996 6888776
No 87
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=95.32 E-value=0.022 Score=60.44 Aligned_cols=91 Identities=22% Similarity=0.287 Sum_probs=62.0
Q ss_pred HhhccCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeCCcccccCCCcCCCCCcchhcCCCCcHHHHHHHHHHhhCCCcEE
Q 005071 360 DILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAA 439 (715)
Q Consensus 360 ~kL~~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~~KAeaaa~~L~~inP~v~v 439 (715)
..|.+++|.|||+|.+|..+|+.|.+.|. +++.+|...- .. +.+.
T Consensus 135 ~~l~g~tvGIiG~G~IG~~vA~~l~~~G~-~V~~~dr~~~--------------~~-------------------~~~~- 179 (315)
T 3pp8_A 135 YTREEFSVGIMGAGVLGAKVAESLQAWGF-PLRCWSRSRK--------------SW-------------------PGVE- 179 (315)
T ss_dssp CCSTTCCEEEECCSHHHHHHHHHHHTTTC-CEEEEESSCC--------------CC-------------------TTCE-
T ss_pred CCcCCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEEcCCch--------------hh-------------------hhhh-
Confidence 56889999999999999999999999997 5666665211 00 0010
Q ss_pred EEEecccCCCCCCCCCccccccccchhhHHHhhccCCEEEEeCC-ChHHHHHHHHHHHh---cCCeEEEee
Q 005071 440 EGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTD-TRESRWLPTLLCAN---TNKITITAA 506 (715)
Q Consensus 440 ~~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tD-s~esR~li~~~~~~---~~kp~I~aa 506 (715)
.+. ....++++++++|+|+.++= +.++|.+++.-... .+..+||++
T Consensus 180 -~~~--------------------~~~~l~ell~~aDiV~l~~Plt~~t~~li~~~~l~~mk~gailIN~a 229 (315)
T 3pp8_A 180 -SYV--------------------GREELRAFLNQTRVLINLLPNTAQTVGIINSELLDQLPDGAYVLNLA 229 (315)
T ss_dssp -EEE--------------------SHHHHHHHHHTCSEEEECCCCCGGGTTCBSHHHHTTSCTTEEEEECS
T ss_pred -hhc--------------------ccCCHHHHHhhCCEEEEecCCchhhhhhccHHHHhhCCCCCEEEECC
Confidence 111 22567888999999999874 67788877544332 234566654
No 88
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=95.32 E-value=0.06 Score=59.77 Aligned_cols=92 Identities=18% Similarity=0.196 Sum_probs=65.7
Q ss_pred hhccCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeCCcccccCCCcCCCCCcchhcCCCCcHHHHHHHHHHhhCCCcEEE
Q 005071 361 ILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAE 440 (715)
Q Consensus 361 kL~~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~~KAeaaa~~L~~inP~v~v~ 440 (715)
.+++++|+|||.|.+|...++.|...| .+++++|.+.-. ++ +.+.+ ...+++
T Consensus 9 ~l~~~~vlVvGgG~va~~k~~~L~~~g-a~V~vi~~~~~~-------------~~------------~~l~~-~~~i~~- 60 (457)
T 1pjq_A 9 QLRDRDCLIVGGGDVAERKARLLLEAG-ARLTVNALTFIP-------------QF------------TVWAN-EGMLTL- 60 (457)
T ss_dssp CCBTCEEEEECCSHHHHHHHHHHHHTT-BEEEEEESSCCH-------------HH------------HHHHT-TTSCEE-
T ss_pred ECCCCEEEEECCCHHHHHHHHHHHhCc-CEEEEEcCCCCH-------------HH------------HHHHh-cCCEEE-
Confidence 478999999999999999999999999 589999973110 11 11111 122333
Q ss_pred EEecccCCCCCCCCCccccccccchhhHHHhhccCCEEEEeCCChHHHHHHHHHHHhcCCeE
Q 005071 441 GVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTRESRWLPTLLCANTNKIT 502 (715)
Q Consensus 441 ~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~esR~li~~~~~~~~kp~ 502 (715)
+...+ . .+.++++|+||-++|..+....+-..|++.++|+
T Consensus 61 -~~~~~-----------------~----~~~l~~~~lVi~at~~~~~n~~i~~~a~~~~i~v 100 (457)
T 1pjq_A 61 -VEGPF-----------------D----ETLLDSCWLAIAATDDDTVNQRVSDAAESRRIFC 100 (457)
T ss_dssp -EESSC-----------------C----GGGGTTCSEEEECCSCHHHHHHHHHHHHHTTCEE
T ss_pred -EECCC-----------------C----ccccCCccEEEEcCCCHHHHHHHHHHHHHcCCEE
Confidence 22211 1 1235689999999999987778888999999996
No 89
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=95.30 E-value=0.042 Score=56.66 Aligned_cols=32 Identities=31% Similarity=0.433 Sum_probs=29.1
Q ss_pred CeEEEEcCChHHHHHHHHHHHhcCCeEEEEeCC
Q 005071 365 RKCLLLGAGTLGCQVARMLMAWGVRKITLLDNG 397 (715)
Q Consensus 365 ~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~D 397 (715)
+||.|||+|.+|+.+|..|+..|. +++++|.+
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~-~V~l~d~~ 36 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGF-AVTAYDIN 36 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC-eEEEEeCC
Confidence 689999999999999999999997 78888863
No 90
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=95.29 E-value=0.04 Score=58.55 Aligned_cols=36 Identities=25% Similarity=0.494 Sum_probs=32.2
Q ss_pred hccCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeCC
Q 005071 362 LSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNG 397 (715)
Q Consensus 362 L~~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~D 397 (715)
++..||.|+|+|.+|+.+|..|+..|+++|+|+|.+
T Consensus 3 m~~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~ 38 (321)
T 3p7m_A 3 MARKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIA 38 (321)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCC
Confidence 456799999999999999999999998889998874
No 91
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=95.28 E-value=0.034 Score=57.01 Aligned_cols=31 Identities=35% Similarity=0.575 Sum_probs=27.9
Q ss_pred CeEEEEcCChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 365 RKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 365 ~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
.||+|||+|.+|+.+|..|++.|. +++++|.
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~r 34 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGN-DVTLIDQ 34 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECS
T ss_pred CeEEEECcCHHHHHHHHHHHhCCC-cEEEEEC
Confidence 489999999999999999999995 7888775
No 92
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=95.28 E-value=0.055 Score=55.11 Aligned_cols=91 Identities=12% Similarity=0.101 Sum_probs=56.4
Q ss_pred hhccCeEEEEcC-ChHHHHHHHHHHHhcCCeEEEEeCCcccccCCCcCCCCCcchhcCCCCcHHHHHHHHHHhhCCCcEE
Q 005071 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAA 439 (715)
Q Consensus 361 kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~~KAeaaa~~L~~inP~v~v 439 (715)
.+++++|+|.|+ ||+|..+|+.|++.|. ++.+++.+ ..|.+.+++.|++..+ .++
T Consensus 9 ~~~~k~vlITGas~GIG~~~a~~L~~~G~-~V~~~~r~----------------------~~~~~~~~~~l~~~~~-~~~ 64 (311)
T 3o26_A 9 VTKRRCAVVTGGNKGIGFEICKQLSSNGI-MVVLTCRD----------------------VTKGHEAVEKLKNSNH-ENV 64 (311)
T ss_dssp ---CCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESC----------------------HHHHHHHHHHHHTTTC-CSE
T ss_pred cCCCcEEEEecCCchHHHHHHHHHHHCCC-EEEEEeCC----------------------HHHHHHHHHHHHhcCC-Cce
Confidence 467889999986 8999999999999997 68887652 2355666677776643 345
Q ss_pred EEEecccCCCCCCCCCccc-cccccchhhHHHhhccCCEEEEeCCC
Q 005071 440 EGVVMAIPMPGHPVPCQEE-DSVLDDCRRLTDLILSHDVIFLLTDT 484 (715)
Q Consensus 440 ~~~~~~Ipmpgh~~~~~~~-~~~~~~~~~l~~li~~~DvV~~~tDs 484 (715)
..+..++ ++ . +....-.+.+.+.+...|+||.+..-
T Consensus 65 ~~~~~Dl-------~~--~~~~v~~~~~~~~~~~g~iD~lv~nAg~ 101 (311)
T 3o26_A 65 VFHQLDV-------TD--PIATMSSLADFIKTHFGKLDILVNNAGV 101 (311)
T ss_dssp EEEECCT-------TS--CHHHHHHHHHHHHHHHSSCCEEEECCCC
T ss_pred EEEEccC-------CC--cHHHHHHHHHHHHHhCCCCCEEEECCcc
Confidence 6666554 10 0 11111112223334578999998763
No 93
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=95.25 E-value=0.057 Score=56.48 Aligned_cols=102 Identities=17% Similarity=0.114 Sum_probs=63.5
Q ss_pred hccCeEEEEcC-ChHHHHHHHHHHHhcCCeEEEEeCCcccccCCCcCCCCCcchhcCCCCcHHHHHHHHHHhhCCCcEEE
Q 005071 362 LSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAE 440 (715)
Q Consensus 362 L~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~~KAeaaa~~L~~inP~v~v~ 440 (715)
+..++|+|.|+ |.+|..+++.|+..| .++++++.+.- . ...|+..+ +.+.. +.+++
T Consensus 8 M~~~~IlVtGatG~iG~~l~~~L~~~g-~~V~~l~R~~~-------------~-----~~~~~~~~-~~l~~--~~v~~- 64 (346)
T 3i6i_A 8 SPKGRVLIAGATGFIGQFVATASLDAH-RPTYILARPGP-------------R-----SPSKAKIF-KALED--KGAII- 64 (346)
T ss_dssp ---CCEEEECTTSHHHHHHHHHHHHTT-CCEEEEECSSC-------------C-----CHHHHHHH-HHHHH--TTCEE-
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHCC-CCEEEEECCCC-------------C-----ChhHHHHH-HHHHh--CCcEE-
Confidence 34578999998 999999999999999 56777766420 0 01133222 22222 34544
Q ss_pred EEecccCCCCCCCCCccccccccchhhHHHhhc--cCCEEEEeCCC--hHHHHHHHHHHHhcC-CeEE
Q 005071 441 GVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLIL--SHDVIFLLTDT--RESRWLPTLLCANTN-KITI 503 (715)
Q Consensus 441 ~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~--~~DvV~~~tDs--~esR~li~~~~~~~~-kp~I 503 (715)
+..++ .+.+.+.++++ ++|+||.+... ...-.-+-++|.+.+ ...+
T Consensus 65 -~~~Dl----------------~d~~~l~~~~~~~~~d~Vi~~a~~~n~~~~~~l~~aa~~~g~v~~~ 115 (346)
T 3i6i_A 65 -VYGLI----------------NEQEAMEKILKEHEIDIVVSTVGGESILDQIALVKAMKAVGTIKRF 115 (346)
T ss_dssp -EECCT----------------TCHHHHHHHHHHTTCCEEEECCCGGGGGGHHHHHHHHHHHCCCSEE
T ss_pred -EEeec----------------CCHHHHHHHHhhCCCCEEEECCchhhHHHHHHHHHHHHHcCCceEE
Confidence 33333 35678888899 99999999874 333344555667666 5433
No 94
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=95.24 E-value=0.074 Score=52.99 Aligned_cols=35 Identities=23% Similarity=0.383 Sum_probs=29.6
Q ss_pred hhccCeEEEEc-CChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 361 ILSSRKCLLLG-AGTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 361 kL~~~kVlIvG-aGgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
.+++++|+|.| .|++|..+|+.|+..|. ++.++|.
T Consensus 10 ~l~~k~vlItGasggiG~~la~~l~~~G~-~V~~~~r 45 (260)
T 3awd_A 10 RLDNRVAIVTGGAQNIGLACVTALAEAGA-RVIIADL 45 (260)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeC
Confidence 35788999997 48999999999999996 6888765
No 95
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=95.23 E-value=0.028 Score=59.93 Aligned_cols=36 Identities=22% Similarity=0.444 Sum_probs=32.3
Q ss_pred HhhccCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 360 DILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 360 ~kL~~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
..|.+++|.|||+|.+|..+|+.|.+.|. +++.+|.
T Consensus 133 ~~l~gktvGIiGlG~IG~~vA~~l~~~G~-~V~~~dr 168 (324)
T 3evt_A 133 STLTGQQLLIYGTGQIGQSLAAKASALGM-HVIGVNT 168 (324)
T ss_dssp CCSTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred ccccCCeEEEECcCHHHHHHHHHHHhCCC-EEEEECC
Confidence 56899999999999999999999999997 6777775
No 96
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=95.23 E-value=0.15 Score=51.85 Aligned_cols=97 Identities=16% Similarity=0.187 Sum_probs=60.1
Q ss_pred cCeEEEEcC-ChHHHHHHHHHHHhcCCeEEEEeCCcccccCCCcCCCCCcchhcCCCC--cHHHHHHHHHHhhCCCcEEE
Q 005071 364 SRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGD--FKAMAAVKSLERIFPAVAAE 440 (715)
Q Consensus 364 ~~kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~--~KAeaaa~~L~~inP~v~v~ 440 (715)
.++|+|.|+ |++|..+++.|+..| -+++.++.+.-+ - .. .|++.+ +.+.. +++++
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~R~~~~--------------~---~~~~~~~~~~-~~l~~--~~v~~- 59 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAG-NPTYALVRKTIT--------------A---ANPETKEELI-DNYQS--LGVIL- 59 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHT-CCEEEEECCSCC--------------S---SCHHHHHHHH-HHHHH--TTCEE-
T ss_pred CcEEEEECCCchHHHHHHHHHHhCC-CcEEEEECCCcc--------------c---CChHHHHHHH-HHHHh--CCCEE-
Confidence 468999997 999999999999999 466666653200 0 11 233322 22322 34544
Q ss_pred EEecccCCCCCCCCCccccccccchhhHHHhhccCCEEEEeCCCh--HHHHHHHHHHHhcC
Q 005071 441 GVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTR--ESRWLPTLLCANTN 499 (715)
Q Consensus 441 ~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~--esR~li~~~~~~~~ 499 (715)
+..++ .+.+.+.+++++.|+||.+.... ..-..+-++|.+.+
T Consensus 60 -v~~D~----------------~d~~~l~~~~~~~d~vi~~a~~~~~~~~~~l~~aa~~~g 103 (307)
T 2gas_A 60 -LEGDI----------------NDHETLVKAIKQVDIVICAAGRLLIEDQVKIIKAIKEAG 103 (307)
T ss_dssp -EECCT----------------TCHHHHHHHHTTCSEEEECSSSSCGGGHHHHHHHHHHHC
T ss_pred -EEeCC----------------CCHHHHHHHHhCCCEEEECCcccccccHHHHHHHHHhcC
Confidence 33333 35677888899999999988642 22233444566665
No 97
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=95.23 E-value=0.073 Score=53.59 Aligned_cols=34 Identities=21% Similarity=0.403 Sum_probs=29.1
Q ss_pred hccCeEEEEcC-ChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 362 LSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 362 L~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
+++++|+|.|+ ||+|..+|+.|++.|. +++++|.
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r 39 (263)
T 3ai3_A 5 ISGKVAVITGSSSGIGLAIAEGFAKEGA-HIVLVAR 39 (263)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcC
Confidence 56788999985 8999999999999996 6777765
No 98
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=95.23 E-value=0.046 Score=57.29 Aligned_cols=63 Identities=21% Similarity=0.285 Sum_probs=46.3
Q ss_pred hhccCeEEEEcC-ChHHHHHHHHHHHhcCCeEEEEeCCcccccCCCcCCCCCcchhcCCCCcHHHHHHHHHHhhCCCcEE
Q 005071 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAA 439 (715)
Q Consensus 361 kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~~KAeaaa~~L~~inP~v~v 439 (715)
.+++++|+|.|+ ||+|..+|+.|+..|. ++.++|.+ ..|.+.+++.+....+..++
T Consensus 5 ~l~~k~vlVTGas~gIG~~la~~l~~~G~-~Vv~~~r~----------------------~~~~~~~~~~l~~~~~~~~~ 61 (319)
T 3ioy_A 5 DFAGRTAFVTGGANGVGIGLVRQLLNQGC-KVAIADIR----------------------QDSIDKALATLEAEGSGPEV 61 (319)
T ss_dssp CCTTCEEEEETTTSTHHHHHHHHHHHTTC-EEEEEESC----------------------HHHHHHHHHHHHHHTCGGGE
T ss_pred CCCCCEEEEcCCchHHHHHHHHHHHHCCC-EEEEEECC----------------------HHHHHHHHHHHHhcCCCCeE
Confidence 467889999985 8999999999999997 57777652 23555666667666665566
Q ss_pred EEEeccc
Q 005071 440 EGVVMAI 446 (715)
Q Consensus 440 ~~~~~~I 446 (715)
..+..++
T Consensus 62 ~~~~~Dl 68 (319)
T 3ioy_A 62 MGVQLDV 68 (319)
T ss_dssp EEEECCT
T ss_pred EEEECCC
Confidence 6666554
No 99
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=95.20 E-value=0.047 Score=58.25 Aligned_cols=34 Identities=26% Similarity=0.558 Sum_probs=31.0
Q ss_pred ccCeEEEEcCChHHHHHHHHHHHhcC-CeEEEEeC
Q 005071 363 SSRKCLLLGAGTLGCQVARMLMAWGV-RKITLLDN 396 (715)
Q Consensus 363 ~~~kVlIvGaGgLGs~VA~~La~~GV-g~ItLVD~ 396 (715)
...||.|+|+|.+|+.+|..|+..|+ ++|+|+|.
T Consensus 8 ~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~ 42 (326)
T 3vku_A 8 DHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDI 42 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeC
Confidence 45799999999999999999999998 68999886
No 100
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=95.18 E-value=0.093 Score=51.05 Aligned_cols=73 Identities=12% Similarity=0.146 Sum_probs=50.7
Q ss_pred CeEEEEcC-ChHHHHHHHHHHHhcCCeEEEEeCCcccccCCCcCCCCCcchhcCCCCcHHHHHHHHHHhhCCCcEEEEEe
Q 005071 365 RKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEGVV 443 (715)
Q Consensus 365 ~kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~~KAeaaa~~L~~inP~v~v~~~~ 443 (715)
++|+|.|+ |++|..+++.|+..| -++++++.+.-.... . .+. ++.+.
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~-----------~------------------~~~--~~~~~ 52 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRG-FEVTAVVRHPEKIKI-----------E------------------NEH--LKVKK 52 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTT-CEEEEECSCGGGCCC-----------C------------------CTT--EEEEC
T ss_pred CEEEEEcCCchHHHHHHHHHHHCC-CEEEEEEcCcccchh-----------c------------------cCc--eEEEE
Confidence 68999995 999999999999999 578888774221110 0 122 34444
Q ss_pred cccCCCCCCCCCccccccccchhhHHHhhccCCEEEEeCCCh
Q 005071 444 MAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTR 485 (715)
Q Consensus 444 ~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~ 485 (715)
.++ .+.+.+.++++++|+||.+....
T Consensus 53 ~Dl----------------~d~~~~~~~~~~~d~vi~~a~~~ 78 (227)
T 3dhn_A 53 ADV----------------SSLDEVCEVCKGADAVISAFNPG 78 (227)
T ss_dssp CCT----------------TCHHHHHHHHTTCSEEEECCCC-
T ss_pred ecC----------------CCHHHHHHHhcCCCEEEEeCcCC
Confidence 333 35677888889999999987543
No 101
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=95.15 E-value=0.023 Score=59.07 Aligned_cols=35 Identities=20% Similarity=0.294 Sum_probs=27.2
Q ss_pred hccCeEEEEcC-ChHHHHHHHHHHHhcCC-eEEEEeC
Q 005071 362 LSSRKCLLLGA-GTLGCQVARMLMAWGVR-KITLLDN 396 (715)
Q Consensus 362 L~~~kVlIvGa-GgLGs~VA~~La~~GVg-~ItLVD~ 396 (715)
++..+|||.|+ |.+|+.+++.|+..|.. +++.+|.
T Consensus 22 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~ 58 (346)
T 4egb_A 22 SNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDA 58 (346)
T ss_dssp --CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEEC
T ss_pred cCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEec
Confidence 45678999998 99999999999999943 4555554
No 102
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=95.11 E-value=0.067 Score=55.13 Aligned_cols=34 Identities=26% Similarity=0.500 Sum_probs=28.2
Q ss_pred hccCeEEEEcC-ChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 362 LSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 362 L~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
+++++|+|.|+ |++|+.+++.|+..|. +++++|.
T Consensus 1 m~~~~vlVtGatG~iG~~l~~~L~~~G~-~V~~~~r 35 (345)
T 2z1m_A 1 MSGKRALITGIRGQDGAYLAKLLLEKGY-EVYGADR 35 (345)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECS
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEEC
Confidence 35689999997 9999999999999994 7777765
No 103
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=95.10 E-value=0.048 Score=58.15 Aligned_cols=33 Identities=30% Similarity=0.522 Sum_probs=30.3
Q ss_pred cCeEEEEcCChHHHHHHHHHHHhcC-CeEEEEeC
Q 005071 364 SRKCLLLGAGTLGCQVARMLMAWGV-RKITLLDN 396 (715)
Q Consensus 364 ~~kVlIvGaGgLGs~VA~~La~~GV-g~ItLVD~ 396 (715)
..||.|+|+|.+|+.+|..|+..|+ ++|+++|.
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~ 38 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQGITDELVVIDV 38 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEec
Confidence 4689999999999999999999997 68999886
No 104
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=95.08 E-value=0.032 Score=57.38 Aligned_cols=32 Identities=31% Similarity=0.383 Sum_probs=28.2
Q ss_pred cCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 364 SRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 364 ~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
..||.|||+|.+|+.+++.|+..|. +++++|.
T Consensus 4 ~~~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~ 35 (301)
T 3cky_A 4 SIKIGFIGLGAMGKPMAINLLKEGV-TVYAFDL 35 (301)
T ss_dssp CCEEEEECCCTTHHHHHHHHHHTTC-EEEEECS
T ss_pred CCEEEEECccHHHHHHHHHHHHCCC-eEEEEeC
Confidence 3589999999999999999999996 6778775
No 105
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=95.07 E-value=0.13 Score=49.98 Aligned_cols=94 Identities=14% Similarity=0.081 Sum_probs=59.0
Q ss_pred CeEEEEcC-ChHHHHHHHHHH-HhcCCeEEEEeCCcccccCCCcCCCCCcc-hhcCCCCcHHHHHHHHHHhhCCCcEEEE
Q 005071 365 RKCLLLGA-GTLGCQVARMLM-AWGVRKITLLDNGRVAMSNPLRQSLYTLD-DCLNGGDFKAMAAVKSLERIFPAVAAEG 441 (715)
Q Consensus 365 ~kVlIvGa-GgLGs~VA~~La-~~GVg~ItLVD~D~Ve~sNl~RQ~L~~~~-Di~~~G~~KAeaaa~~L~~inP~v~v~~ 441 (715)
++|+|.|+ |++|..+++.|+ ..|. ++++++.+. + .+ +. +.+..+. ++.
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~~g~-~V~~~~r~~--------------~~~~--------~~----~~~~~~~--~~~ 56 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTYTDM-HITLYGRQL--------------KTRI--------PP----EIIDHER--VTV 56 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHHCCC-EEEEEESSH--------------HHHS--------CH----HHHTSTT--EEE
T ss_pred EEEEEEeCCcHHHHHHHHHHHhcCCc-eEEEEecCc--------------cccc--------hh----hccCCCc--eEE
Confidence 45999995 999999999999 8897 778777631 1 11 01 1112233 444
Q ss_pred EecccCCCCCCCCCccccccccchhhHHHhhccCCEEEEeCCC--hHHHHHHHHHHHhcCC-eEEE
Q 005071 442 VVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDT--RESRWLPTLLCANTNK-ITIT 504 (715)
Q Consensus 442 ~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs--~esR~li~~~~~~~~k-p~I~ 504 (715)
+..++ .+.+.+.++++++|+||.+... ..++.++.. +.+.+. -+|+
T Consensus 57 ~~~D~----------------~d~~~~~~~~~~~d~vv~~ag~~n~~~~~~~~~-~~~~~~~~iv~ 105 (221)
T 3r6d_A 57 IEGSF----------------QNPGXLEQAVTNAEVVFVGAMESGSDMASIVKA-LSRXNIRRVIG 105 (221)
T ss_dssp EECCT----------------TCHHHHHHHHTTCSEEEESCCCCHHHHHHHHHH-HHHTTCCEEEE
T ss_pred EECCC----------------CCHHHHHHHHcCCCEEEEcCCCCChhHHHHHHH-HHhcCCCeEEE
Confidence 55443 3567788889999999998864 224444443 344443 3444
No 106
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=95.04 E-value=0.074 Score=53.69 Aligned_cols=83 Identities=20% Similarity=0.203 Sum_probs=55.8
Q ss_pred HhhccCeEEEEcC-ChHHHHHHHHHHHhcCCeEEEEeCCcccccCCCcCCCCCcchhcCCCCcHHHHHHHHHHhhCCCcE
Q 005071 360 DILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVA 438 (715)
Q Consensus 360 ~kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~~KAeaaa~~L~~inP~v~ 438 (715)
..+++++|+|.|+ ||+|..+|+.|++.|.. +.++|.+ ..+.+.+++.+.+..+ +
T Consensus 25 ~~l~~k~vlITGas~gIG~~la~~l~~~G~~-V~~~~r~----------------------~~~~~~~~~~~~~~~~--~ 79 (262)
T 3rkr_A 25 SSLSGQVAVVTGASRGIGAAIARKLGSLGAR-VVLTARD----------------------VEKLRAVEREIVAAGG--E 79 (262)
T ss_dssp CTTTTCEEEESSTTSHHHHHHHHHHHHTTCE-EEEEESC----------------------HHHHHHHHHHHHHTTC--E
T ss_pred hccCCCEEEEECCCChHHHHHHHHHHHCCCE-EEEEECC----------------------HHHHHHHHHHHHHhCC--c
Confidence 3577889999985 89999999999999974 7777752 2345566666766543 5
Q ss_pred EEEEecccCCCCCCCCCccccccccchhhHHHh-------hccCCEEEEeCC
Q 005071 439 AEGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDL-------ILSHDVIFLLTD 483 (715)
Q Consensus 439 v~~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~l-------i~~~DvV~~~tD 483 (715)
+..+..++ .+.+.+..+ +...|+||.+..
T Consensus 80 ~~~~~~D~----------------~~~~~v~~~~~~~~~~~g~id~lv~~Ag 115 (262)
T 3rkr_A 80 AESHACDL----------------SHSDAIAAFATGVLAAHGRCDVLVNNAG 115 (262)
T ss_dssp EEEEECCT----------------TCHHHHHHHHHHHHHHHSCCSEEEECCC
T ss_pred eeEEEecC----------------CCHHHHHHHHHHHHHhcCCCCEEEECCC
Confidence 55565544 123333333 345899998765
No 107
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=95.03 E-value=0.18 Score=52.58 Aligned_cols=86 Identities=13% Similarity=0.108 Sum_probs=55.0
Q ss_pred hhccCeEEEEcC-ChHHHHHHHHHHHhcCCeEEEEeCCcccccCCCcCCCCCcchhcCCCCcHHHHHHHHHHhh-CCCcE
Q 005071 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERI-FPAVA 438 (715)
Q Consensus 361 kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~~KAeaaa~~L~~i-nP~v~ 438 (715)
.++..+|||.|+ |.+|+.+++.|+..|. +++++|...-. ...+.+.+++.+... .+.
T Consensus 24 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~------------------~~~~~~~~~~~~~~~~~~~-- 82 (352)
T 1sb8_A 24 PAQPKVWLITGVAGFIGSNLLETLLKLDQ-KVVGLDNFATG------------------HQRNLDEVRSLVSEKQWSN-- 82 (352)
T ss_dssp HHSCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSSC------------------CHHHHHHHHHHSCHHHHTT--
T ss_pred CccCCeEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCCcc------------------chhhHHHHhhhcccccCCc--
Confidence 356789999998 9999999999999994 67777753210 011222222222111 123
Q ss_pred EEEEecccCCCCCCCCCccccccccchhhHHHhhccCCEEEEeCC
Q 005071 439 AEGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTD 483 (715)
Q Consensus 439 v~~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tD 483 (715)
++.+..++ .+.+.+.+++++.|+||.+..
T Consensus 83 ~~~~~~Dl----------------~d~~~~~~~~~~~d~vih~A~ 111 (352)
T 1sb8_A 83 FKFIQGDI----------------RNLDDCNNACAGVDYVLHQAA 111 (352)
T ss_dssp EEEEECCT----------------TSHHHHHHHHTTCSEEEECCS
T ss_pred eEEEECCC----------------CCHHHHHHHhcCCCEEEECCc
Confidence 44444443 345677888899999999875
No 108
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=95.01 E-value=0.03 Score=57.93 Aligned_cols=32 Identities=22% Similarity=0.432 Sum_probs=28.7
Q ss_pred CeEEEEcCChHHHHHHHHHHHhcCCeEEEEeCC
Q 005071 365 RKCLLLGAGTLGCQVARMLMAWGVRKITLLDNG 397 (715)
Q Consensus 365 ~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~D 397 (715)
.||.|||+|.+|+.+|+.|++.|. +++++|.+
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~-~V~~~d~~ 35 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGY-LLNVFDLV 35 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTC-EEEEECSS
T ss_pred CEEEEEeecHHHHHHHHHHHhCCC-eEEEEcCC
Confidence 589999999999999999999996 78887764
No 109
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=95.01 E-value=0.059 Score=55.81 Aligned_cols=34 Identities=21% Similarity=0.264 Sum_probs=31.3
Q ss_pred hccCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeCC
Q 005071 362 LSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNG 397 (715)
Q Consensus 362 L~~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~D 397 (715)
+++++|+|+|+||+|..+|+.|++.| +++++|.+
T Consensus 126 l~~k~vlV~GaGgiG~aia~~L~~~G--~V~v~~r~ 159 (287)
T 1nvt_A 126 VKDKNIVIYGAGGAARAVAFELAKDN--NIIIANRT 159 (287)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHTSSS--EEEEECSS
T ss_pred cCCCEEEEECchHHHHHHHHHHHHCC--CEEEEECC
Confidence 67889999999999999999999999 99998763
No 110
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=94.99 E-value=0.026 Score=59.31 Aligned_cols=36 Identities=25% Similarity=0.484 Sum_probs=32.2
Q ss_pred HhhccCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 360 DILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 360 ~kL~~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
..|.+++|.|||+|.+|..+|+.|.+.|. +++.+|.
T Consensus 118 ~~l~g~tvGIIGlG~IG~~vA~~l~~~G~-~V~~~dr 153 (290)
T 3gvx_A 118 TLLYGKALGILGYGGIGRRVAHLAKAFGM-RVIAYTR 153 (290)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHHTC-EEEEECS
T ss_pred eeeecchheeeccCchhHHHHHHHHhhCc-EEEEEec
Confidence 46889999999999999999999999997 6777775
No 111
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=94.96 E-value=0.065 Score=56.74 Aligned_cols=74 Identities=20% Similarity=0.151 Sum_probs=55.6
Q ss_pred ccCeEEEEcCChHHHHHHHHHHHh-cCCeEEEEeCCcccccCCCcCCCCCcchhcCCCCcHHHHHHHHHHhhCCCcEEEE
Q 005071 363 SSRKCLLLGAGTLGCQVARMLMAW-GVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEG 441 (715)
Q Consensus 363 ~~~kVlIvGaGgLGs~VA~~La~~-GVg~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~~KAeaaa~~L~~inP~v~v~~ 441 (715)
..++|+|||+|+.|...++.|... ++.+++++|. ...|++.+++.+.... +.+.
T Consensus 124 ~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r----------------------~~~~a~~la~~~~~~~--~~~~- 178 (322)
T 1omo_A 124 NSSVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDV----------------------REKAAKKFVSYCEDRG--ISAS- 178 (322)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECS----------------------SHHHHHHHHHHHHHTT--CCEE-
T ss_pred CCCEEEEEcCcHHHHHHHHHHHHhCCccEEEEECC----------------------CHHHHHHHHHHHHhcC--ceEE-
Confidence 567999999999999999999984 6899999775 2347777777776532 2332
Q ss_pred EecccCCCCCCCCCccccccccchhhHHHhhccCCEEEEeCCCh
Q 005071 442 VVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTR 485 (715)
Q Consensus 442 ~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~ 485 (715)
+ +++++.+ ++|+|+.||-+.
T Consensus 179 ~-----------------------~~~~e~v-~aDvVi~aTp~~ 198 (322)
T 1omo_A 179 V-----------------------QPAEEAS-RCDVLVTTTPSR 198 (322)
T ss_dssp E-----------------------CCHHHHT-SSSEEEECCCCS
T ss_pred E-----------------------CCHHHHh-CCCEEEEeeCCC
Confidence 2 2345667 899999999763
No 112
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=94.95 E-value=0.029 Score=55.69 Aligned_cols=28 Identities=21% Similarity=0.421 Sum_probs=24.6
Q ss_pred CeEEEEcCChHHHHHHHHHHHhcCCeEEE
Q 005071 365 RKCLLLGAGTLGCQVARMLMAWGVRKITL 393 (715)
Q Consensus 365 ~kVlIvGaGgLGs~VA~~La~~GVg~ItL 393 (715)
.||.|||+|.+|..+|+.|++.|. ++++
T Consensus 24 mkI~IIG~G~mG~~la~~l~~~g~-~V~~ 51 (220)
T 4huj_A 24 TTYAIIGAGAIGSALAERFTAAQI-PAII 51 (220)
T ss_dssp CCEEEEECHHHHHHHHHHHHHTTC-CEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC-EEEE
Confidence 589999999999999999999996 3444
No 113
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=94.95 E-value=0.034 Score=58.47 Aligned_cols=35 Identities=17% Similarity=0.269 Sum_probs=31.3
Q ss_pred hccCeEEEEcCChHHHHHHHHHHHh-cCCeEEEEeC
Q 005071 362 LSSRKCLLLGAGTLGCQVARMLMAW-GVRKITLLDN 396 (715)
Q Consensus 362 L~~~kVlIvGaGgLGs~VA~~La~~-GVg~ItLVD~ 396 (715)
....+|+|||+|..|..++++|... |+.+++++|.
T Consensus 133 ~~~~~igiIG~G~~g~~~a~~l~~~~g~~~V~v~dr 168 (312)
T 2i99_A 133 PSSEVLCILGAGVQAYSHYEIFTEQFSFKEVRIWNR 168 (312)
T ss_dssp TTCCEEEEECCSHHHHHHHHHHHHHCCCSEEEEECS
T ss_pred CCCcEEEEECCcHHHHHHHHHHHHhCCCcEEEEEcC
Confidence 4577999999999999999999988 8889999775
No 114
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=94.93 E-value=0.084 Score=53.42 Aligned_cols=62 Identities=18% Similarity=0.259 Sum_probs=44.1
Q ss_pred hhccCeEEEEc-CChHHHHHHHHHHHhcCCeEEEEeCCcccccCCCcCCCCCcchhcCCCCcHHHHHHHHHHhhCCCcEE
Q 005071 361 ILSSRKCLLLG-AGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAA 439 (715)
Q Consensus 361 kL~~~kVlIvG-aGgLGs~VA~~La~~GVg~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~~KAeaaa~~L~~inP~v~v 439 (715)
.+++++|+|.| .||+|..+|+.|++.|. ++.++|.+ ..+.+.+++.+++.. ..++
T Consensus 7 ~l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~----------------------~~~~~~~~~~l~~~~-~~~~ 62 (262)
T 3pk0_A 7 DLQGRSVVVTGGTKGIGRGIATVFARAGA-NVAVAGRS----------------------TADIDACVADLDQLG-SGKV 62 (262)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESC----------------------HHHHHHHHHHHHTTS-SSCE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCC----------------------HHHHHHHHHHHHhhC-CCcE
Confidence 46788999997 58999999999999997 68887762 224555666666543 2355
Q ss_pred EEEeccc
Q 005071 440 EGVVMAI 446 (715)
Q Consensus 440 ~~~~~~I 446 (715)
..+..++
T Consensus 63 ~~~~~Dv 69 (262)
T 3pk0_A 63 IGVQTDV 69 (262)
T ss_dssp EEEECCT
T ss_pred EEEEcCC
Confidence 6666544
No 115
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=94.91 E-value=0.067 Score=54.75 Aligned_cols=37 Identities=14% Similarity=0.314 Sum_probs=31.3
Q ss_pred HHhhccCeEEEEcC-ChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 359 LDILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 359 q~kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
...+++++|+|.|+ ||+|..+|+.|++.|. +++++|.
T Consensus 21 ~~~l~~k~vlITGasggiG~~la~~L~~~G~-~V~~~~r 58 (302)
T 1w6u_A 21 PNSFQGKVAFITGGGTGLGKGMTTLLSSLGA-QCVIASR 58 (302)
T ss_dssp TTTTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred cccCCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeC
Confidence 34678899999985 7999999999999996 5777765
No 116
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=94.89 E-value=0.058 Score=55.47 Aligned_cols=33 Identities=24% Similarity=0.481 Sum_probs=29.3
Q ss_pred CeEEEEcCChHHHHHHHHHHHhcCCeEEEEeCCc
Q 005071 365 RKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGR 398 (715)
Q Consensus 365 ~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~D~ 398 (715)
.||.|||+|.+|+.+|+.|++.|. +++++|.+.
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~~ 34 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGC-SVTIWNRSP 34 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSG
T ss_pred CEEEEEeecHHHHHHHHHHHHCCC-eEEEEcCCH
Confidence 589999999999999999999995 788888753
No 117
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=94.89 E-value=0.083 Score=55.54 Aligned_cols=33 Identities=33% Similarity=0.377 Sum_probs=28.8
Q ss_pred cCeEEEEcCChHHHHHHHHHHHhcC---CeEEEEeC
Q 005071 364 SRKCLLLGAGTLGCQVARMLMAWGV---RKITLLDN 396 (715)
Q Consensus 364 ~~kVlIvGaGgLGs~VA~~La~~GV---g~ItLVD~ 396 (715)
..||.|||+|.+|+.+|..|++.|+ .+++++|.
T Consensus 22 ~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r 57 (322)
T 2izz_A 22 SMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSP 57 (322)
T ss_dssp CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECC
Confidence 3479999999999999999999995 57888765
No 118
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=94.88 E-value=0.12 Score=54.01 Aligned_cols=93 Identities=20% Similarity=0.179 Sum_probs=61.7
Q ss_pred HhhccCeEEEEcC-ChHHHHHHHHHHHhcCCeEEEEeCCcccccCCCcCCCCCcchhcCCCCcHHHHHHHHHHhhCCCcE
Q 005071 360 DILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVA 438 (715)
Q Consensus 360 ~kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~~KAeaaa~~L~~inP~v~ 438 (715)
..+++++|+|.|+ ||+|..+|+.|++.|. ++.++|.+.- +.|.. .- ...+.+.+++.+.... .+
T Consensus 23 ~~l~gk~vlVTGas~GIG~aia~~la~~G~-~Vv~~~r~~~----~~~~~-----~~---~~~~~~~~~~~~~~~~--~~ 87 (322)
T 3qlj_A 23 GVVDGRVVIVTGAGGGIGRAHALAFAAEGA-RVVVNDIGVG----LDGSP-----AS---GGSAAQSVVDEITAAG--GE 87 (322)
T ss_dssp CTTTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECCCBC----TTSSB-----TC---TTSHHHHHHHHHHHTT--CE
T ss_pred cccCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCccc----ccccc-----cc---cHHHHHHHHHHHHhcC--Cc
Confidence 4578899999985 7999999999999996 7888887532 11211 11 3456777777777764 35
Q ss_pred EEEEecccCCCCCCCCCccccccccchhhHHHhh-------ccCCEEEEeCC
Q 005071 439 AEGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLI-------LSHDVIFLLTD 483 (715)
Q Consensus 439 v~~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li-------~~~DvV~~~tD 483 (715)
+..+..++ .+.+.+.+++ ...|+||.+..
T Consensus 88 ~~~~~~Dv----------------~d~~~v~~~~~~~~~~~g~iD~lv~nAg 123 (322)
T 3qlj_A 88 AVADGSNV----------------ADWDQAAGLIQTAVETFGGLDVLVNNAG 123 (322)
T ss_dssp EEEECCCT----------------TSHHHHHHHHHHHHHHHSCCCEEECCCC
T ss_pred EEEEECCC----------------CCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 55665544 2333333333 37899998764
No 119
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=94.87 E-value=0.069 Score=53.89 Aligned_cols=34 Identities=29% Similarity=0.470 Sum_probs=28.4
Q ss_pred hccCeEEEEcC-ChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 362 LSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 362 L~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
+++++|+|.|+ ||+|..+|+.|++.|. +++++|.
T Consensus 5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r 39 (267)
T 2gdz_A 5 VNGKVALVTGAAQGIGRAFAEALLLKGA-KVALVDW 39 (267)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEEEC
Confidence 46788999985 8999999999999995 5777764
No 120
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=94.86 E-value=0.075 Score=56.05 Aligned_cols=34 Identities=29% Similarity=0.569 Sum_probs=30.2
Q ss_pred cCeEEEEcCChHHHHHHHHHHHhcC-CeEEEEeCC
Q 005071 364 SRKCLLLGAGTLGCQVARMLMAWGV-RKITLLDNG 397 (715)
Q Consensus 364 ~~kVlIvGaGgLGs~VA~~La~~GV-g~ItLVD~D 397 (715)
..||.|+|+|.+|..+|..|+..|. ++|.++|.+
T Consensus 6 ~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~ 40 (316)
T 1ldn_A 6 GARVVVIGAGFVGASYVFALMNQGIADEIVLIDAN 40 (316)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 3689999999999999999999884 789999863
No 121
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=94.86 E-value=0.18 Score=51.45 Aligned_cols=98 Identities=12% Similarity=0.053 Sum_probs=59.6
Q ss_pred hhccCeEEEEcC-ChHHHHHHHHHHHhcCCeEEEEeCCcccccCCCcCCCCCcchhcCCCCcHHHHHHHHHHhhCCCcEE
Q 005071 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAA 439 (715)
Q Consensus 361 kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~~KAeaaa~~L~~inP~v~v 439 (715)
+|++++|+|.|+ ||+|..+|+.|++.|. ++.++|.+.-......+..+... ...+.+.+++.+.... .++
T Consensus 8 ~l~~k~~lVTGas~gIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~--~~~ 78 (286)
T 3uve_A 8 RVEGKVAFVTGAARGQGRSHAVRLAQEGA-DIIAVDICKPIRAGVVDTAIPAS------TPEDLAETADLVKGHN--RRI 78 (286)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCSBTTBCCCSSCCC------CHHHHHHHHHHHHTTT--CCE
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeccccccccccccccccC------CHHHHHHHHHHHhhcC--Cce
Confidence 578899999985 6899999999999995 58888875322222222111110 2335555666666554 345
Q ss_pred EEEecccCCCCCCCCCccccccccchhhHHHhh-------ccCCEEEEeCC
Q 005071 440 EGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLI-------LSHDVIFLLTD 483 (715)
Q Consensus 440 ~~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li-------~~~DvV~~~tD 483 (715)
..+..++ .+.+.+.+++ ...|++|.+..
T Consensus 79 ~~~~~Dv----------------~~~~~v~~~~~~~~~~~g~id~lv~nAg 113 (286)
T 3uve_A 79 VTAEVDV----------------RDYDALKAAVDSGVEQLGRLDIIVANAG 113 (286)
T ss_dssp EEEECCT----------------TCHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred EEEEcCC----------------CCHHHHHHHHHHHHHHhCCCCEEEECCc
Confidence 5565544 1233333333 47899998764
No 122
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=94.85 E-value=0.13 Score=52.25 Aligned_cols=97 Identities=23% Similarity=0.240 Sum_probs=59.4
Q ss_pred cCeEEEEcC-ChHHHHHHHHHHHhcCCeEEEEeCCcccccCCCcCCCCCcchhcCCCCcHHHHHHHHHHhhCCCcEEEEE
Q 005071 364 SRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEGV 442 (715)
Q Consensus 364 ~~kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~~KAeaaa~~L~~inP~v~v~~~ 442 (715)
.++|+|+|+ |.+|+.+++.|+..| .+++.++.+.-.. | + ..|+..+ +.+. .+++++ +
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~l~R~~~~~----~-------~-----~~~~~~~-~~l~--~~~v~~--v 61 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDLG-HPTFLLVRESTAS----S-------N-----SEKAQLL-ESFK--ASGANI--V 61 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTT-CCEEEECCCCCTT----T-------T-----HHHHHHH-HHHH--TTTCEE--E
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCC-CCEEEEECCcccc----c-------C-----HHHHHHH-HHHH--hCCCEE--E
Confidence 468999997 999999999999999 4666655432100 0 0 1132222 1222 244543 3
Q ss_pred ecccCCCCCCCCCccccccccchhhHHHhhccCCEEEEeCCChH---HHHHHHHHHHhcC
Q 005071 443 VMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTRE---SRWLPTLLCANTN 499 (715)
Q Consensus 443 ~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~e---sR~li~~~~~~~~ 499 (715)
..++ .+.+.+.+.++++|+||.++.... .+. +-++|.+.+
T Consensus 62 ~~D~----------------~d~~~l~~~~~~~d~vi~~a~~~~~~~~~~-l~~aa~~~g 104 (308)
T 1qyc_A 62 HGSI----------------DDHASLVEAVKNVDVVISTVGSLQIESQVN-IIKAIKEVG 104 (308)
T ss_dssp CCCT----------------TCHHHHHHHHHTCSEEEECCCGGGSGGGHH-HHHHHHHHC
T ss_pred Eecc----------------CCHHHHHHHHcCCCEEEECCcchhhhhHHH-HHHHHHhcC
Confidence 3332 356778888999999999987532 333 345566665
No 123
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=94.85 E-value=0.13 Score=52.71 Aligned_cols=36 Identities=22% Similarity=0.320 Sum_probs=30.6
Q ss_pred HhhccCeEEEEc-CChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 360 DILSSRKCLLLG-AGTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 360 ~kL~~~kVlIvG-aGgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
-.|++++|+|.| .||+|..+|+.|++.|. ++.++|.
T Consensus 28 ~~l~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r 64 (276)
T 3r1i_A 28 FDLSGKRALITGASTGIGKKVALAYAEAGA-QVAVAAR 64 (276)
T ss_dssp GCCTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeC
Confidence 357889999998 58999999999999996 5777775
No 124
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=94.83 E-value=0.061 Score=56.51 Aligned_cols=34 Identities=24% Similarity=0.441 Sum_probs=30.9
Q ss_pred cCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeCC
Q 005071 364 SRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNG 397 (715)
Q Consensus 364 ~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~D 397 (715)
..||.|||+|.+|+.+|..|+..|...++++|.+
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~ 37 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIA 37 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCC
Confidence 4689999999999999999999998679999974
No 125
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=94.82 E-value=0.09 Score=53.23 Aligned_cols=33 Identities=42% Similarity=0.540 Sum_probs=28.6
Q ss_pred ccCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 363 SSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 363 ~~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
+..||||.|+|.+|+.+++.|+..|. +++.++.
T Consensus 2 ~~~~ilVtGaG~iG~~l~~~L~~~g~-~V~~~~r 34 (286)
T 3gpi_A 2 SLSKILIAGCGDLGLELARRLTAQGH-EVTGLRR 34 (286)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHTTC-CEEEEEC
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCC-EEEEEeC
Confidence 45789999999999999999999996 6777665
No 126
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=94.78 E-value=0.072 Score=55.92 Aligned_cols=32 Identities=25% Similarity=0.288 Sum_probs=28.6
Q ss_pred CeEEEEcCChHHHHHHHHHHHhcCCeEEEEeCC
Q 005071 365 RKCLLLGAGTLGCQVARMLMAWGVRKITLLDNG 397 (715)
Q Consensus 365 ~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~D 397 (715)
.||+|||+|.+|+.+|..|++.|. +++++|.+
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~-~V~~~~r~ 36 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQ-SVLAWDID 36 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHhCCC-EEEEEeCC
Confidence 589999999999999999999995 68888763
No 127
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=94.77 E-value=0.12 Score=52.86 Aligned_cols=36 Identities=17% Similarity=0.429 Sum_probs=30.8
Q ss_pred HhhccCeEEEEc-CChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 360 DILSSRKCLLLG-AGTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 360 ~kL~~~kVlIvG-aGgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
.++++++|+|.| .||+|..+|+.|++.|. +++++|.
T Consensus 14 ~~l~~k~vlVTGasggIG~~la~~l~~~G~-~V~~~~r 50 (303)
T 1yxm_A 14 GLLQGQVAIVTGGATGIGKAIVKELLELGS-NVVIASR 50 (303)
T ss_dssp TTTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence 468889999997 57999999999999995 5777765
No 128
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=94.77 E-value=0.083 Score=55.55 Aligned_cols=39 Identities=18% Similarity=0.374 Sum_probs=29.5
Q ss_pred hHHhhccCeEEEEc-CChHHHHHHHHHHHh-cCCeEEEEeCC
Q 005071 358 NLDILSSRKCLLLG-AGTLGCQVARMLMAW-GVRKITLLDNG 397 (715)
Q Consensus 358 gq~kL~~~kVlIvG-aGgLGs~VA~~La~~-GVg~ItLVD~D 397 (715)
|...++.++|||.| .|.+|+.+++.|+.. | -+++.+|..
T Consensus 18 ~~~~m~~~~vlVtGatG~iG~~l~~~L~~~~g-~~V~~~~r~ 58 (372)
T 3slg_A 18 GPGSMKAKKVLILGVNGFIGHHLSKRILETTD-WEVFGMDMQ 58 (372)
T ss_dssp -----CCCEEEEESCSSHHHHHHHHHHHHHSS-CEEEEEESC
T ss_pred CCcccCCCEEEEECCCChHHHHHHHHHHhCCC-CEEEEEeCC
Confidence 34567889999999 599999999999998 6 478887763
No 129
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=94.77 E-value=0.053 Score=53.72 Aligned_cols=32 Identities=25% Similarity=0.386 Sum_probs=27.8
Q ss_pred cCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 364 SRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 364 ~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
..||+|||+|.+|..+++.|++.|. +++++|.
T Consensus 28 ~~~I~iiG~G~~G~~la~~l~~~g~-~V~~~~r 59 (215)
T 2vns_A 28 APKVGILGSGDFARSLATRLVGSGF-KVVVGSR 59 (215)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTC-CEEEEES
T ss_pred CCEEEEEccCHHHHHHHHHHHHCCC-EEEEEeC
Confidence 4689999999999999999999996 6777775
No 130
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=94.74 E-value=0.11 Score=53.73 Aligned_cols=82 Identities=22% Similarity=0.255 Sum_probs=55.0
Q ss_pred hhccCeEEEEcC-ChHHHHHHHHHHHhcCCeEEEEeCCcccccCCCcCCCCCcchhcCCCCcHHHHHHHHHHhhCCCcEE
Q 005071 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAA 439 (715)
Q Consensus 361 kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~~KAeaaa~~L~~inP~v~v 439 (715)
.+++++|+|.|+ ||+|..+|+.|++.|. ++.++|.+ ..+.+.+++.+.... .++
T Consensus 28 ~l~gk~vlVTGas~gIG~~la~~l~~~G~-~V~~~~r~----------------------~~~~~~~~~~l~~~~--~~~ 82 (301)
T 3tjr_A 28 GFDGRAAVVTGGASGIGLATATEFARRGA-RLVLSDVD----------------------QPALEQAVNGLRGQG--FDA 82 (301)
T ss_dssp CSTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESC----------------------HHHHHHHHHHHHHTT--CCE
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECC----------------------HHHHHHHHHHHHhcC--Cce
Confidence 467899999985 7899999999999996 57777652 234556666666654 345
Q ss_pred EEEecccCCCCCCCCCccccccccchhhHHHhh-------ccCCEEEEeCC
Q 005071 440 EGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLI-------LSHDVIFLLTD 483 (715)
Q Consensus 440 ~~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li-------~~~DvV~~~tD 483 (715)
..+..++ .+.+.+.+++ ...|+||.+..
T Consensus 83 ~~~~~Dv----------------~d~~~v~~~~~~~~~~~g~id~lvnnAg 117 (301)
T 3tjr_A 83 HGVVCDV----------------RHLDEMVRLADEAFRLLGGVDVVFSNAG 117 (301)
T ss_dssp EEEECCT----------------TCHHHHHHHHHHHHHHHSSCSEEEECCC
T ss_pred EEEEccC----------------CCHHHHHHHHHHHHHhCCCCCEEEECCC
Confidence 5555544 1233333333 37899998764
No 131
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=94.74 E-value=0.065 Score=54.03 Aligned_cols=35 Identities=11% Similarity=0.313 Sum_probs=30.0
Q ss_pred hhccCeEEEEcC-ChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 361 kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
.|++++|+|.|+ ||+|..+|+.|++.|. ++.++|.
T Consensus 3 ~l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r 38 (257)
T 3imf_A 3 AMKEKVVIITGGSSGMGKGMATRFAKEGA-RVVITGR 38 (257)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeC
Confidence 577889999985 8999999999999996 5777775
No 132
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=94.72 E-value=0.18 Score=52.35 Aligned_cols=38 Identities=26% Similarity=0.397 Sum_probs=32.6
Q ss_pred HHhhccCeEEEEcC-ChHHHHHHHHHHHhcCCeEEEEeCC
Q 005071 359 LDILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNG 397 (715)
Q Consensus 359 q~kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD~D 397 (715)
.+.+++.+|||.|+ |++|..+++.|+..| -+++++|..
T Consensus 15 ~~~~~~~~vlVTGasG~iG~~l~~~L~~~g-~~V~~~~r~ 53 (330)
T 2pzm_A 15 VPRGSHMRILITGGAGCLGSNLIEHWLPQG-HEILVIDNF 53 (330)
T ss_dssp CSTTTCCEEEEETTTSHHHHHHHHHHGGGT-CEEEEEECC
T ss_pred cccCCCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEECC
Confidence 35677889999997 999999999999999 478888763
No 133
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=94.70 E-value=0.17 Score=51.25 Aligned_cols=95 Identities=21% Similarity=0.155 Sum_probs=59.1
Q ss_pred HhhccCeEEEEcC-ChHHHHHHHHHHHhcCCeEEEEeCCcccccCCCcCCCCCcchhcCCCCcHHHHHHHHHHhhCCCcE
Q 005071 360 DILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVA 438 (715)
Q Consensus 360 ~kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~~KAeaaa~~L~~inP~v~ 438 (715)
..|++++|+|.|+ ||+|..+|+.|++.|.. +.++|.+.-. .+.. +... ...+.+.+++.+....+ +
T Consensus 9 ~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~-~~~~----~~~~-----~~~~~~~~~~~~~~~~~--~ 75 (278)
T 3sx2_A 9 GPLTGKVAFITGAARGQGRAHAVRLAADGAD-IIAVDLCDQI-ASVP----YPLA-----TPEELAATVKLVEDIGS--R 75 (278)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHTTCE-EEEEECCSCC-TTCS----SCCC-----CHHHHHHHHHHHHHHTC--C
T ss_pred CCCCCCEEEEECCCChHHHHHHHHHHHCCCe-EEEEeccccc-cccc----cccc-----chHHHHHHHHHHHhcCC--e
Confidence 4578899999985 79999999999999964 7788764210 0000 0000 23355556666666654 4
Q ss_pred EEEEecccCCCCCCCCCccccccccchhhHHHhh-------ccCCEEEEeCC
Q 005071 439 AEGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLI-------LSHDVIFLLTD 483 (715)
Q Consensus 439 v~~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li-------~~~DvV~~~tD 483 (715)
+..+..++ .+.+.+.+++ ...|+||.+..
T Consensus 76 ~~~~~~D~----------------~~~~~v~~~~~~~~~~~g~id~lv~nAg 111 (278)
T 3sx2_A 76 IVARQADV----------------RDRESLSAALQAGLDELGRLDIVVANAG 111 (278)
T ss_dssp EEEEECCT----------------TCHHHHHHHHHHHHHHHCCCCEEEECCC
T ss_pred EEEEeCCC----------------CCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 55565544 2333344443 37899999764
No 134
>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2
Probab=94.68 E-value=0.15 Score=50.25 Aligned_cols=33 Identities=15% Similarity=0.162 Sum_probs=28.2
Q ss_pred cCeEEEEc-CChHHHHHHHHHHHhcCC------eEEEEeC
Q 005071 364 SRKCLLLG-AGTLGCQVARMLMAWGVR------KITLLDN 396 (715)
Q Consensus 364 ~~kVlIvG-aGgLGs~VA~~La~~GVg------~ItLVD~ 396 (715)
+++|+|.| .||+|..+++.|++.|.. ++.++|.
T Consensus 2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r 41 (244)
T 2bd0_A 2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSR 41 (244)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEES
T ss_pred CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeC
Confidence 46789997 589999999999999986 7888775
No 135
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=94.68 E-value=0.094 Score=54.57 Aligned_cols=34 Identities=32% Similarity=0.489 Sum_probs=30.3
Q ss_pred cCeEEEEcCChHHHHHHHHHHHhcC-CeEEEEeCC
Q 005071 364 SRKCLLLGAGTLGCQVARMLMAWGV-RKITLLDNG 397 (715)
Q Consensus 364 ~~kVlIvGaGgLGs~VA~~La~~GV-g~ItLVD~D 397 (715)
..||+|||+|.+|+.+|..|+..|. ++++++|.+
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~ 41 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIA 41 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 4689999999999999999999995 589999874
No 136
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=94.67 E-value=0.091 Score=51.83 Aligned_cols=34 Identities=21% Similarity=0.373 Sum_probs=28.6
Q ss_pred hccCeEEEEc-CChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 362 LSSRKCLLLG-AGTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 362 L~~~kVlIvG-aGgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
+++++|+|.| .|++|..+++.|++.|. +++++|.
T Consensus 5 ~~~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r 39 (248)
T 2pnf_A 5 LQGKVSLVTGSTRGIGRAIAEKLASAGS-TVIITGT 39 (248)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeC
Confidence 5678899997 58999999999999995 6777765
No 137
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=94.67 E-value=0.085 Score=52.90 Aligned_cols=36 Identities=28% Similarity=0.386 Sum_probs=30.5
Q ss_pred HhhccCeEEEEcC-ChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 360 DILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 360 ~kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
++|++++|+|.|+ ||+|..+|+.|+..|. ++.++|.
T Consensus 2 ~~l~gk~vlVTGas~gIG~a~a~~l~~~G~-~V~~~~r 38 (247)
T 3rwb_A 2 ERLAGKTALVTGAAQGIGKAIAARLAADGA-TVIVSDI 38 (247)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECS
T ss_pred CCcCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeC
Confidence 3578899999985 7999999999999996 5777665
No 138
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=94.67 E-value=0.12 Score=54.84 Aligned_cols=33 Identities=18% Similarity=0.372 Sum_probs=30.1
Q ss_pred CeEEEEcCChHHHHHHHHHHHhcCCeEEEEeCC
Q 005071 365 RKCLLLGAGTLGCQVARMLMAWGVRKITLLDNG 397 (715)
Q Consensus 365 ~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~D 397 (715)
.||.|+|+|.+|..+|..|+..|...++|+|.+
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~ 42 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALRELADVVLYDVV 42 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 589999999999999999999998559999974
No 139
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=94.67 E-value=0.049 Score=54.89 Aligned_cols=31 Identities=13% Similarity=0.246 Sum_probs=27.3
Q ss_pred CeEEEEcCChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 365 RKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 365 ~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
.||.|||+|.+|..+++.|.+.| ..++++|.
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~~g-~~v~~~~~ 34 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQTP-HELIISGS 34 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTTSS-CEEEEECS
T ss_pred cEEEEECCCHHHHHHHHHHHhCC-CeEEEECC
Confidence 48999999999999999999998 47777765
No 140
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=94.66 E-value=0.12 Score=54.90 Aligned_cols=37 Identities=30% Similarity=0.389 Sum_probs=32.0
Q ss_pred HHhhccCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 359 LDILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 359 q~kL~~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
...|+..+|.|||+|.+|..+|+.|...|+ +++++|.
T Consensus 11 ~~~l~~~~I~IIG~G~mG~alA~~L~~~G~-~V~~~~~ 47 (338)
T 1np3_A 11 LSIIQGKKVAIIGYGSQGHAHACNLKDSGV-DVTVGLR 47 (338)
T ss_dssp HHHHHTSCEEEECCSHHHHHHHHHHHHTTC-CEEEECC
T ss_pred cchhcCCEEEEECchHHHHHHHHHHHHCcC-EEEEEEC
Confidence 456888999999999999999999999996 5667664
No 141
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=94.66 E-value=0.2 Score=48.63 Aligned_cols=90 Identities=12% Similarity=0.126 Sum_probs=59.1
Q ss_pred eEEEEc-CChHHHHHHHHHHHhcCCeEEEEeCCcccccCCCcCCCCCcchhcCCCCcHHHHHHHHHHhhCCCcEEEEEec
Q 005071 366 KCLLLG-AGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEGVVM 444 (715)
Q Consensus 366 kVlIvG-aGgLGs~VA~~La~~GVg~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~~KAeaaa~~L~~inP~v~v~~~~~ 444 (715)
||+|.| .|++|..+++.|+..| -++++++.+. +.. ... +. ++.+..
T Consensus 2 ~ilItGatG~iG~~l~~~L~~~g-~~V~~~~R~~--------------~~~---~~~-------------~~--~~~~~~ 48 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLSTTD-YQIYAGARKV--------------EQV---PQY-------------NN--VKAVHF 48 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHTTSS-CEEEEEESSG--------------GGS---CCC-------------TT--EEEEEC
T ss_pred eEEEECCCCHHHHHHHHHHHHCC-CEEEEEECCc--------------cch---hhc-------------CC--ceEEEe
Confidence 799999 7999999999999999 5788877642 111 110 22 344444
Q ss_pred ccCCCCCCCCCccccccccc-hhhHHHhhccCCEEEEeCCCh---------HHHHHHHHHHHhcCC-eEEE
Q 005071 445 AIPMPGHPVPCQEEDSVLDD-CRRLTDLILSHDVIFLLTDTR---------ESRWLPTLLCANTNK-ITIT 504 (715)
Q Consensus 445 ~Ipmpgh~~~~~~~~~~~~~-~~~l~~li~~~DvV~~~tDs~---------esR~li~~~~~~~~k-p~I~ 504 (715)
++ .+ .+.+.+++++.|+||.+.... ..-..+-++|.+.+. .+|+
T Consensus 49 D~----------------~d~~~~~~~~~~~~d~vi~~ag~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~ 103 (219)
T 3dqp_A 49 DV----------------DWTPEEMAKQLHGMDAIINVSGSGGKSLLKVDLYGAVKLMQAAEKAEVKRFIL 103 (219)
T ss_dssp CT----------------TSCHHHHHTTTTTCSEEEECCCCTTSSCCCCCCHHHHHHHHHHHHTTCCEEEE
T ss_pred cc----------------cCCHHHHHHHHcCCCEEEECCcCCCCCcEeEeHHHHHHHHHHHHHhCCCEEEE
Confidence 43 24 677888899999999988643 223344455666653 3444
No 142
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=94.65 E-value=0.25 Score=48.78 Aligned_cols=95 Identities=13% Similarity=0.145 Sum_probs=60.4
Q ss_pred cCeEEEEc-CChHHHHHHHHHHHhcCCeEEEEeCCcccccCCCcCCCCCcchhcCCCCcHHHHHHHHHHhhCCCcEEEEE
Q 005071 364 SRKCLLLG-AGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEGV 442 (715)
Q Consensus 364 ~~kVlIvG-aGgLGs~VA~~La~~GVg~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~~KAeaaa~~L~~inP~v~v~~~ 442 (715)
.++|+|.| .|++|..+++.|+..|--++++++.+.-... ... + + .++.+
T Consensus 23 mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~-----------~~~--~---------------~--~~~~~ 72 (236)
T 3qvo_A 23 MKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIH-----------KPY--P---------------T--NSQII 72 (236)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSC-----------SSC--C---------------T--TEEEE
T ss_pred ccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhc-----------ccc--c---------------C--CcEEE
Confidence 46899999 5999999999999999557888776431110 010 0 1 24445
Q ss_pred ecccCCCCCCCCCccccccccchhhHHHhhccCCEEEEeCCChH----HHHHHHHHHHhcCC-eEEEe
Q 005071 443 VMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTRE----SRWLPTLLCANTNK-ITITA 505 (715)
Q Consensus 443 ~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~e----sR~li~~~~~~~~k-p~I~a 505 (715)
..++ .+.+.+.++++++|+||.+..... ++.++ ..+.+.+. -+|+.
T Consensus 73 ~~Dl----------------~d~~~~~~~~~~~D~vv~~a~~~~~~~~~~~~~-~~~~~~~~~~iV~i 123 (236)
T 3qvo_A 73 MGDV----------------LNHAALKQAMQGQDIVYANLTGEDLDIQANSVI-AAMKACDVKRLIFV 123 (236)
T ss_dssp ECCT----------------TCHHHHHHHHTTCSEEEEECCSTTHHHHHHHHH-HHHHHTTCCEEEEE
T ss_pred EecC----------------CCHHHHHHHhcCCCEEEEcCCCCchhHHHHHHH-HHHHHcCCCEEEEE
Confidence 5443 356778888999999998876533 23333 33445553 35554
No 143
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=94.64 E-value=0.064 Score=57.58 Aligned_cols=35 Identities=26% Similarity=0.462 Sum_probs=31.3
Q ss_pred hccCeEEEEcC-ChHHHHHHHHHHHhcC-CeEEEEeC
Q 005071 362 LSSRKCLLLGA-GTLGCQVARMLMAWGV-RKITLLDN 396 (715)
Q Consensus 362 L~~~kVlIvGa-GgLGs~VA~~La~~GV-g~ItLVD~ 396 (715)
+...||.|+|+ |.+|+.+|..|+..|. .+|+|+|-
T Consensus 6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi 42 (343)
T 3fi9_A 6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDP 42 (343)
T ss_dssp SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECS
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeC
Confidence 45789999998 9999999999999997 58999886
No 144
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=94.63 E-value=0.11 Score=52.95 Aligned_cols=60 Identities=25% Similarity=0.251 Sum_probs=42.2
Q ss_pred hccCeEEEEcC-ChHHHHHHHHHHHhcCCeEEEEeCCcccccCCCcCCCCCcchhcCCCCcHHHHHHHHHHhhCCCcEEE
Q 005071 362 LSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAE 440 (715)
Q Consensus 362 L~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~~KAeaaa~~L~~inP~v~v~ 440 (715)
+.+++|+|.|+ ||+|..+|+.|++.|. ++.++|.+ ..+.+.+++.+.+.. .++.
T Consensus 2 l~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~----------------------~~~~~~~~~~l~~~~--~~~~ 56 (264)
T 3tfo_A 2 VMDKVILITGASGGIGEGIARELGVAGA-KILLGARR----------------------QARIEAIATEIRDAG--GTAL 56 (264)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESS----------------------HHHHHHHHHHHHHTT--CEEE
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHCCC-EEEEEECC----------------------HHHHHHHHHHHHhcC--CcEE
Confidence 45778999985 7999999999999996 47777652 224556666676653 4555
Q ss_pred EEeccc
Q 005071 441 GVVMAI 446 (715)
Q Consensus 441 ~~~~~I 446 (715)
.+..++
T Consensus 57 ~~~~Dv 62 (264)
T 3tfo_A 57 AQVLDV 62 (264)
T ss_dssp EEECCT
T ss_pred EEEcCC
Confidence 555544
No 145
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=94.63 E-value=0.13 Score=51.77 Aligned_cols=34 Identities=15% Similarity=0.261 Sum_probs=29.5
Q ss_pred hccCeEEEEc-CChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 362 LSSRKCLLLG-AGTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 362 L~~~kVlIvG-aGgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
+++++|+|.| .||+|..+|+.|++.|. ++.++|.
T Consensus 5 ~~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r 39 (252)
T 3h7a_A 5 PRNATVAVIGAGDYIGAEIAKKFAAEGF-TVFAGRR 39 (252)
T ss_dssp CCSCEEEEECCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeC
Confidence 5788999998 56999999999999997 5888776
No 146
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=94.60 E-value=0.11 Score=52.95 Aligned_cols=35 Identities=31% Similarity=0.396 Sum_probs=31.7
Q ss_pred hhccCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeCC
Q 005071 361 ILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNG 397 (715)
Q Consensus 361 kL~~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~D 397 (715)
.+++ +|+|||+|+.|..+|+.|...|+ +++++|.+
T Consensus 114 ~l~~-~v~iiG~G~~g~~~a~~l~~~g~-~v~v~~r~ 148 (263)
T 2d5c_A 114 PLKG-PALVLGAGGAGRAVAFALREAGL-EVWVWNRT 148 (263)
T ss_dssp CCCS-CEEEECCSHHHHHHHHHHHHTTC-CEEEECSS
T ss_pred CCCC-eEEEECCcHHHHHHHHHHHHCCC-EEEEEECC
Confidence 3678 99999999999999999999998 89998864
No 147
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=94.60 E-value=0.17 Score=51.52 Aligned_cols=63 Identities=25% Similarity=0.246 Sum_probs=45.1
Q ss_pred hhccCeEEEEc-CChHHHHHHHHHHHhcCCeEEEEeCCcccccCCCcCCCCCcchhcCCCCcHHHHHHHHHHhhCC-CcE
Q 005071 361 ILSSRKCLLLG-AGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFP-AVA 438 (715)
Q Consensus 361 kL~~~kVlIvG-aGgLGs~VA~~La~~GVg~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~~KAeaaa~~L~~inP-~v~ 438 (715)
.+++++|+|.| .||+|..+|+.|++.|. ++.++|.+ ..+.+.+++.+++... ..+
T Consensus 8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~----------------------~~~~~~~~~~l~~~~~~~~~ 64 (281)
T 3svt_A 8 SFQDRTYLVTGGGSGIGKGVAAGLVAAGA-SVMIVGRN----------------------PDKLAGAVQELEALGANGGA 64 (281)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESC----------------------HHHHHHHHHHHHTTCCSSCE
T ss_pred CcCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCC----------------------HHHHHHHHHHHHHhCCCCce
Confidence 46788999997 57999999999999996 57777752 2245556666766543 236
Q ss_pred EEEEeccc
Q 005071 439 AEGVVMAI 446 (715)
Q Consensus 439 v~~~~~~I 446 (715)
+..+..++
T Consensus 65 ~~~~~~Dv 72 (281)
T 3svt_A 65 IRYEPTDI 72 (281)
T ss_dssp EEEEECCT
T ss_pred EEEEeCCC
Confidence 66666554
No 148
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=94.60 E-value=0.18 Score=51.50 Aligned_cols=97 Identities=15% Similarity=0.184 Sum_probs=59.7
Q ss_pred cCeEEEEcC-ChHHHHHHHHHHHhcCCeEEEEeCCcccccCCCcCCCCCcchhcCCCCcHHHHHHHHHHhhCCCcEEEEE
Q 005071 364 SRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEGV 442 (715)
Q Consensus 364 ~~kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~~KAeaaa~~L~~inP~v~v~~~ 442 (715)
.++|+|+|+ |.+|..+++.|+..| .+++.++.+.-. . ...|++.+. .+. .+.+++ +
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~R~~~~--------------~---~~~~~~~~~-~~~--~~~~~~--~ 60 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISLG-HPTYVLFRPEVV--------------S---NIDKVQMLL-YFK--QLGAKL--I 60 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTT-CCEEEECCSCCS--------------S---CHHHHHHHH-HHH--TTTCEE--E
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCC-CcEEEEECCCcc--------------c---chhHHHHHH-HHH--hCCeEE--E
Confidence 468999996 999999999999999 467776653200 0 011222221 122 344443 3
Q ss_pred ecccCCCCCCCCCccccccccchhhHHHhhccCCEEEEeCCCh------HHHHHHHHHHHhcC
Q 005071 443 VMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTR------ESRWLPTLLCANTN 499 (715)
Q Consensus 443 ~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~------esR~li~~~~~~~~ 499 (715)
..++ .+.+.+.++++++|+||.++... ..-..+-++|.+.+
T Consensus 61 ~~D~----------------~d~~~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~l~~aa~~~g 107 (313)
T 1qyd_A 61 EASL----------------DDHQRLVDALKQVDVVISALAGGVLSHHILEQLKLVEAIKEAG 107 (313)
T ss_dssp CCCS----------------SCHHHHHHHHTTCSEEEECCCCSSSSTTTTTHHHHHHHHHHSC
T ss_pred eCCC----------------CCHHHHHHHHhCCCEEEECCccccchhhHHHHHHHHHHHHhcC
Confidence 3332 35677888899999999988633 22233445666666
No 149
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=94.59 E-value=0.19 Score=52.10 Aligned_cols=39 Identities=26% Similarity=0.261 Sum_probs=26.9
Q ss_pred hHHhhccCeEEEEcC-ChHHHHHHHHHHHhcCCeEEEEeCC
Q 005071 358 NLDILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNG 397 (715)
Q Consensus 358 gq~kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD~D 397 (715)
.+..++.++|||.|+ |.+|+.+++.|+..|. +++.+|..
T Consensus 13 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~G~-~V~~~~r~ 52 (347)
T 4id9_A 13 GLVPRGSHMILVTGSAGRVGRAVVAALRTQGR-TVRGFDLR 52 (347)
T ss_dssp --------CEEEETTTSHHHHHHHHHHHHTTC-CEEEEESS
T ss_pred cccccCCCEEEEECCCChHHHHHHHHHHhCCC-EEEEEeCC
Confidence 357788999999998 9999999999999995 66676653
No 150
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=94.58 E-value=0.14 Score=51.70 Aligned_cols=35 Identities=23% Similarity=0.413 Sum_probs=29.8
Q ss_pred hhccCeEEEEcC-ChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 361 kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
.|++++|+|.|+ ||+|..+|+.|++.|. ++.++|.
T Consensus 8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r 43 (264)
T 3ucx_A 8 LLTDKVVVISGVGPALGTTLARRCAEQGA-DLVLAAR 43 (264)
T ss_dssp TTTTCEEEEESCCTTHHHHHHHHHHHTTC-EEEEEES
T ss_pred CcCCcEEEEECCCcHHHHHHHHHHHHCcC-EEEEEeC
Confidence 478899999985 6899999999999996 4777765
No 151
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=94.57 E-value=0.062 Score=57.66 Aligned_cols=90 Identities=16% Similarity=0.216 Sum_probs=56.0
Q ss_pred HhhccCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeCCcccccCCCcCCCCCcchhcCCCCcHHHHHHHHHHhhCCCcEE
Q 005071 360 DILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAA 439 (715)
Q Consensus 360 ~kL~~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~~KAeaaa~~L~~inP~v~v 439 (715)
..|.+++|.|||+|.+|..+|+.|.+.|. ++..+|...-. .. +.
T Consensus 167 ~~l~gktiGIIGlG~IG~~vA~~l~~~G~-~V~~~dr~~~~-------------~~---~~------------------- 210 (340)
T 4dgs_A 167 HSPKGKRIGVLGLGQIGRALASRAEAFGM-SVRYWNRSTLS-------------GV---DW------------------- 210 (340)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSCCT-------------TS---CC-------------------
T ss_pred ccccCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCccc-------------cc---Cc-------------------
Confidence 46889999999999999999999999997 57776652110 01 10
Q ss_pred EEEecccCCCCCCCCCccccccccchhhHHHhhccCCEEEEeCC-ChHHHHHHHHHHH---hcCCeEEEeeeC
Q 005071 440 EGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTD-TRESRWLPTLLCA---NTNKITITAALG 508 (715)
Q Consensus 440 ~~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tD-s~esR~li~~~~~---~~~kp~I~aalG 508 (715)
.. ...++++++++|+|+.++- +.++|.+++.-.. +.+..+||++-|
T Consensus 211 ~~-----------------------~~sl~ell~~aDvVil~vP~t~~t~~li~~~~l~~mk~gailIN~aRG 260 (340)
T 4dgs_A 211 IA-----------------------HQSPVDLARDSDVLAVCVAASAATQNIVDASLLQALGPEGIVVNVARG 260 (340)
T ss_dssp EE-----------------------CSSHHHHHHTCSEEEECC----------CHHHHHHTTTTCEEEECSCC
T ss_pred ee-----------------------cCCHHHHHhcCCEEEEeCCCCHHHHHHhhHHHHhcCCCCCEEEECCCC
Confidence 00 1245678899999999874 6778888744322 345677787544
No 152
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=94.57 E-value=0.087 Score=57.82 Aligned_cols=90 Identities=16% Similarity=0.205 Sum_probs=63.3
Q ss_pred cCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeCCcccccCCCcCCCCCcchhcCCCCcHHHHHHHHHHhhCCCcEEEEEe
Q 005071 364 SRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEGVV 443 (715)
Q Consensus 364 ~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~~KAeaaa~~L~~inP~v~v~~~~ 443 (715)
+.+|+|+|+|-+|..+++.|...|+ .+++||.|.- +++.+ ++. ++. .+.
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~-~vvvId~d~~----------------------~v~~~----~~~--g~~--vi~ 52 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGV-KMVVLDHDPD----------------------HIETL----RKF--GMK--VFY 52 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTC-CEEEEECCHH----------------------HHHHH----HHT--TCC--CEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCC-CEEEEECCHH----------------------HHHHH----HhC--CCe--EEE
Confidence 4579999999999999999999995 6888887421 22222 221 222 222
Q ss_pred cccCCCCCCCCCccccccccchhhHHHh-hccCCEEEEeCCChHHHHHHHHHHHhcCC
Q 005071 444 MAIPMPGHPVPCQEEDSVLDDCRRLTDL-ILSHDVIFLLTDTRESRWLPTLLCANTNK 500 (715)
Q Consensus 444 ~~Ipmpgh~~~~~~~~~~~~~~~~l~~l-i~~~DvV~~~tDs~esR~li~~~~~~~~k 500 (715)
.+. .+.+.+... ++++|+||.++++.+.-..+...++..+.
T Consensus 53 GDa----------------t~~~~L~~agi~~A~~viv~~~~~~~n~~i~~~ar~~~p 94 (413)
T 3l9w_A 53 GDA----------------TRMDLLESAGAAKAEVLINAIDDPQTNLQLTEMVKEHFP 94 (413)
T ss_dssp SCT----------------TCHHHHHHTTTTTCSEEEECCSSHHHHHHHHHHHHHHCT
T ss_pred cCC----------------CCHHHHHhcCCCccCEEEECCCChHHHHHHHHHHHHhCC
Confidence 111 234455554 78999999999999988888888888764
No 153
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=94.56 E-value=0.24 Score=50.45 Aligned_cols=96 Identities=21% Similarity=0.128 Sum_probs=59.5
Q ss_pred HhhccCeEEEEc-CChHHHHHHHHHHHhcCCeEEEEeCCcccccCCCcCCCCCcchhcCCCCcHHHHHHHHHHhhCCCcE
Q 005071 360 DILSSRKCLLLG-AGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVA 438 (715)
Q Consensus 360 ~kL~~~kVlIvG-aGgLGs~VA~~La~~GVg~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~~KAeaaa~~L~~inP~v~ 438 (715)
..+++++|+|.| .||+|..+|+.|++.|. ++.++|...-....+. +... ...+.+.+++.+.+.. .+
T Consensus 11 ~~l~gk~~lVTGas~gIG~a~a~~la~~G~-~V~~~~r~~~~~~~~~----~~~~-----~~~~~~~~~~~~~~~~--~~ 78 (280)
T 3pgx_A 11 GSLQGRVAFITGAARGQGRSHAVRLAAEGA-DIIACDICAPVSASVT----YAPA-----SPEDLDETARLVEDQG--RK 78 (280)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCCTTCC----SCCC-----CHHHHHHHHHHHHTTT--CC
T ss_pred cccCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEecccccccccc----cccc-----CHHHHHHHHHHHHhcC--Ce
Confidence 357889999998 57999999999999996 6778886432111111 1111 2335566666666654 44
Q ss_pred EEEEecccCCCCCCCCCccccccccchhhHHHhh-------ccCCEEEEeCC
Q 005071 439 AEGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLI-------LSHDVIFLLTD 483 (715)
Q Consensus 439 v~~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li-------~~~DvV~~~tD 483 (715)
+..+..++ .+.+.+.+++ ...|++|.+..
T Consensus 79 ~~~~~~Dv----------------~~~~~v~~~~~~~~~~~g~id~lvnnAg 114 (280)
T 3pgx_A 79 ALTRVLDV----------------RDDAALRELVADGMEQFGRLDVVVANAG 114 (280)
T ss_dssp EEEEECCT----------------TCHHHHHHHHHHHHHHHCCCCEEEECCC
T ss_pred EEEEEcCC----------------CCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 55555544 1233333333 47899998764
No 154
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=94.55 E-value=0.052 Score=57.44 Aligned_cols=73 Identities=25% Similarity=0.251 Sum_probs=53.2
Q ss_pred ccCeEEEEcCChHHHHHHHHHHHh-cCCeEEEEeCCcccccCCCcCCCCCcchhcCCCCcHHHHHHHHHHhhCCCcEEEE
Q 005071 363 SSRKCLLLGAGTLGCQVARMLMAW-GVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEG 441 (715)
Q Consensus 363 ~~~kVlIvGaGgLGs~VA~~La~~-GVg~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~~KAeaaa~~L~~inP~v~v~~ 441 (715)
..++++|||+|..|...++.|... ++.+|+++|.+ |++..++++.+.. ++.++.
T Consensus 120 ~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~------------------------~a~~la~~l~~~~-g~~~~~ 174 (313)
T 3hdj_A 120 RSSVLGLFGAGTQGAEHAAQLSARFALEAILVHDPY------------------------ASPEILERIGRRC-GVPARM 174 (313)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECTT------------------------CCHHHHHHHHHHH-TSCEEE
T ss_pred CCcEEEEECccHHHHHHHHHHHHhCCCcEEEEECCc------------------------HHHHHHHHHHHhc-CCeEEE
Confidence 467999999999999999999874 78999997763 3445555555432 233322
Q ss_pred EecccCCCCCCCCCccccccccchhhHHHhhccCCEEEEeCCC
Q 005071 442 VVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDT 484 (715)
Q Consensus 442 ~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs 484 (715)
. .+++.++++|+||.||-+
T Consensus 175 ~------------------------~~~eav~~aDIVi~aT~s 193 (313)
T 3hdj_A 175 A------------------------APADIAAQADIVVTATRS 193 (313)
T ss_dssp C------------------------CHHHHHHHCSEEEECCCC
T ss_pred e------------------------CHHHHHhhCCEEEEccCC
Confidence 1 346677899999999976
No 155
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=94.54 E-value=0.06 Score=57.89 Aligned_cols=106 Identities=16% Similarity=0.146 Sum_probs=63.4
Q ss_pred cCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeCCcccccCCCcCCCCCcchhcCCCCcHHHHHHHHHHhhCCCcEEEEEe
Q 005071 364 SRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEGVV 443 (715)
Q Consensus 364 ~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~~KAeaaa~~L~~inP~v~v~~~~ 443 (715)
..||.|||+|..|+.+|..|++.|. +++++|.+. .+++.+.+. ..|+..
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G~-~V~l~~r~~----------------------~~~~~i~~~--~~~~~~------ 77 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKGQ-KVRLWSYES----------------------DHVDEMQAE--GVNNRY------ 77 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTTC-CEEEECSCH----------------------HHHHHHHHH--SSBTTT------
T ss_pred CCeEEEECccHHHHHHHHHHHHCCC-eEEEEeCCH----------------------HHHHHHHHc--CCCccc------
Confidence 4689999999999999999999994 577777631 122222221 111100
Q ss_pred cccCCCCCCCCCccccccccchhhHHHhhccCCEEEEeCCChHHHHHHHHHHHh--cCCeEEEeeeCC
Q 005071 444 MAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTRESRWLPTLLCAN--TNKITITAALGF 509 (715)
Q Consensus 444 ~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~esR~li~~~~~~--~~kp~I~aalG~ 509 (715)
.||..+.. ... ...++.+.++++|+||.++=+...+..+..+... .+.++|+..-|+
T Consensus 78 ----l~g~~l~~----~i~-~t~d~~ea~~~aDvVilaVp~~~~~~vl~~i~~~l~~~~ivvs~~kGi 136 (356)
T 3k96_A 78 ----LPNYPFPE----TLK-AYCDLKASLEGVTDILIVVPSFAFHEVITRMKPLIDAKTRIAWGTKGL 136 (356)
T ss_dssp ----BTTCCCCT----TEE-EESCHHHHHTTCCEEEECCCHHHHHHHHHHHGGGCCTTCEEEECCCSC
T ss_pred ----CCCCccCC----CeE-EECCHHHHHhcCCEEEECCCHHHHHHHHHHHHHhcCCCCEEEEEeCCC
Confidence 01111110 001 1234556678999999999887777777766543 356777764333
No 156
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=94.54 E-value=0.029 Score=57.54 Aligned_cols=30 Identities=27% Similarity=0.486 Sum_probs=27.1
Q ss_pred eEEEEcCChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 366 KCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 366 kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
||.|||+|.+|+.+|+.|++.|. +++++|.
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~-~V~~~~~ 31 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKHGY-PLIIYDV 31 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHTTC-CEEEECS
T ss_pred eEEEEeccHHHHHHHHHHHHCCC-EEEEEeC
Confidence 79999999999999999999996 6778775
No 157
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=94.51 E-value=0.09 Score=54.96 Aligned_cols=32 Identities=38% Similarity=0.594 Sum_probs=29.4
Q ss_pred CeEEEEcCChHHHHHHHHHHHhcC-CeEEEEeC
Q 005071 365 RKCLLLGAGTLGCQVARMLMAWGV-RKITLLDN 396 (715)
Q Consensus 365 ~kVlIvGaGgLGs~VA~~La~~GV-g~ItLVD~ 396 (715)
.||+|||+|.+|+.+|..|+..|+ .+++++|.
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~ 34 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDA 34 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEcC
Confidence 489999999999999999999997 78999886
No 158
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=94.51 E-value=0.055 Score=54.09 Aligned_cols=36 Identities=25% Similarity=0.272 Sum_probs=30.2
Q ss_pred hhccCeEEEEc-CChHHHHHHHHHHHhcCCeEEEEeCC
Q 005071 361 ILSSRKCLLLG-AGTLGCQVARMLMAWGVRKITLLDNG 397 (715)
Q Consensus 361 kL~~~kVlIvG-aGgLGs~VA~~La~~GVg~ItLVD~D 397 (715)
.+++++|+|.| .||+|..+|+.|++.|. +++++|.+
T Consensus 4 ~~~~k~vlITGasggiG~~la~~l~~~G~-~V~~~~r~ 40 (264)
T 2pd6_A 4 RLRSALALVTGAGSGIGRAVSVRLAGEGA-TVAACDLD 40 (264)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCC
Confidence 36678999997 58999999999999995 68887763
No 159
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=94.50 E-value=0.099 Score=51.93 Aligned_cols=34 Identities=26% Similarity=0.387 Sum_probs=28.6
Q ss_pred hccCeEEEEcC-ChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 362 LSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 362 L~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
+++++|+|.|+ ||+|..+|+.|++.|. ++.++|.
T Consensus 3 l~~k~vlITGas~gIG~~~a~~l~~~G~-~v~~~~r 37 (247)
T 3lyl_A 3 LNEKVALVTGASRGIGFEVAHALASKGA-TVVGTAT 37 (247)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeC
Confidence 56788999985 8999999999999996 5777665
No 160
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=94.50 E-value=0.029 Score=59.10 Aligned_cols=32 Identities=31% Similarity=0.504 Sum_probs=28.1
Q ss_pred cCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 364 SRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 364 ~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
..||.|||+|..|+.+|..|++.|. +++++|.
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~~G~-~V~~~~r 45 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHENGE-EVILWAR 45 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECS
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCC-eEEEEeC
Confidence 5689999999999999999999994 6777765
No 161
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=94.50 E-value=0.13 Score=53.71 Aligned_cols=33 Identities=18% Similarity=0.440 Sum_probs=28.9
Q ss_pred ccCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 363 SSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 363 ~~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
...||.|||+|..|..+|++|++.|. +++++|.
T Consensus 8 ~~~~IgiIG~G~mG~~~A~~l~~~G~-~V~~~dr 40 (306)
T 3l6d_A 8 FEFDVSVIGLGAMGTIMAQVLLKQGK-RVAIWNR 40 (306)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHTTC-CEEEECS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCC-EEEEEeC
Confidence 45789999999999999999999996 5777765
No 162
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=94.49 E-value=0.12 Score=52.80 Aligned_cols=37 Identities=19% Similarity=0.481 Sum_probs=31.7
Q ss_pred HHhhccCeEEEEcC-ChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 359 LDILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 359 q~kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
...|++++|+|.|+ ||+|..+|+.|++.|. ++.++|.
T Consensus 22 ~~~l~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r 59 (277)
T 4fc7_A 22 PDLLRDKVAFITGGGSGIGFRIAEIFMRHGC-HTVIASR 59 (277)
T ss_dssp TTTTTTCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEES
T ss_pred ccccCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeC
Confidence 45688999999985 6899999999999997 7888775
No 163
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=94.48 E-value=0.085 Score=55.93 Aligned_cols=35 Identities=26% Similarity=0.375 Sum_probs=32.2
Q ss_pred ccCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeCC
Q 005071 363 SSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNG 397 (715)
Q Consensus 363 ~~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~D 397 (715)
+..||.|+|+|.+|+.+|..|+..|+++++|+|.+
T Consensus 7 ~~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~ 41 (315)
T 3tl2_A 7 KRKKVSVIGAGFTGATTAFLLAQKELADVVLVDIP 41 (315)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCG
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEecc
Confidence 46799999999999999999999999899999984
No 164
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=94.48 E-value=0.14 Score=51.45 Aligned_cols=35 Identities=20% Similarity=0.322 Sum_probs=29.8
Q ss_pred hhccCeEEEEc-CChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 361 ILSSRKCLLLG-AGTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 361 kL~~~kVlIvG-aGgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
.+++++|+|.| .||+|..+|+.|++.|. +++++|.
T Consensus 11 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r 46 (260)
T 2zat_A 11 PLENKVALVTASTDGIGLAIARRLAQDGA-HVVVSSR 46 (260)
T ss_dssp TTTTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence 46788899997 57999999999999996 6777765
No 165
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=94.47 E-value=0.12 Score=52.24 Aligned_cols=35 Identities=17% Similarity=0.360 Sum_probs=29.3
Q ss_pred hhccCeEEEEcC-ChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 361 kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
++++++|+|.|+ ||+|..+|+.|++.|. +++++|.
T Consensus 3 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r 38 (278)
T 1spx_A 3 RFAEKVAIITGSSNGIGRATAVLFAREGA-KVTITGR 38 (278)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeC
Confidence 467788999975 8999999999999996 6777765
No 166
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=94.47 E-value=0.087 Score=52.98 Aligned_cols=35 Identities=31% Similarity=0.486 Sum_probs=29.6
Q ss_pred hhccCeEEEEcC-ChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 361 kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
.+++++|+|.|+ ||+|..+|+.|++.|. +++++|.
T Consensus 2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r 37 (254)
T 1hdc_A 2 DLSGKTVIITGGARGLGAEAARQAVAAGA-RVVLADV 37 (254)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence 367889999986 8999999999999996 5777665
No 167
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=94.46 E-value=0.11 Score=52.49 Aligned_cols=61 Identities=18% Similarity=0.199 Sum_probs=43.0
Q ss_pred hhccCeEEEEc-CChHHHHHHHHHHHhcCCeEEEEeCCcccccCCCcCCCCCcchhcCCCCcHHHHHHHHHHhhCCCcEE
Q 005071 361 ILSSRKCLLLG-AGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAA 439 (715)
Q Consensus 361 kL~~~kVlIvG-aGgLGs~VA~~La~~GVg~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~~KAeaaa~~L~~inP~v~v 439 (715)
.|++++|+|.| .||+|..+|+.|++.|.. +.++|.+ ..+.+.+++.+++..+ ++
T Consensus 9 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r~----------------------~~~~~~~~~~~~~~~~--~~ 63 (256)
T 3gaf_A 9 HLNDAVAIVTGAAAGIGRAIAGTFAKAGAS-VVVTDLK----------------------SEGAEAVAAAIRQAGG--KA 63 (256)
T ss_dssp CCTTCEEEECSCSSHHHHHHHHHHHHHTCE-EEEEESS----------------------HHHHHHHHHHHHHTTC--CE
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEeCC----------------------HHHHHHHHHHHHhcCC--cE
Confidence 46788999997 489999999999999965 7777652 2245566666766544 44
Q ss_pred EEEeccc
Q 005071 440 EGVVMAI 446 (715)
Q Consensus 440 ~~~~~~I 446 (715)
..+..++
T Consensus 64 ~~~~~Dv 70 (256)
T 3gaf_A 64 IGLECNV 70 (256)
T ss_dssp EEEECCT
T ss_pred EEEECCC
Confidence 5555444
No 168
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=94.45 E-value=0.045 Score=57.25 Aligned_cols=37 Identities=22% Similarity=0.255 Sum_probs=31.8
Q ss_pred hhccCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeCCc
Q 005071 361 ILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGR 398 (715)
Q Consensus 361 kL~~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~D~ 398 (715)
..+-.||.|||+|.+|+.+|+.|++.|. +++++|.+.
T Consensus 18 ~~~m~~I~iIG~G~mG~~~A~~l~~~G~-~V~~~dr~~ 54 (310)
T 3doj_A 18 GSHMMEVGFLGLGIMGKAMSMNLLKNGF-KVTVWNRTL 54 (310)
T ss_dssp CCCSCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSG
T ss_pred cccCCEEEEECccHHHHHHHHHHHHCCC-eEEEEeCCH
Confidence 4445789999999999999999999996 788888754
No 169
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=94.45 E-value=0.13 Score=52.45 Aligned_cols=32 Identities=31% Similarity=0.459 Sum_probs=27.9
Q ss_pred CeEEEEcCChHHHHHHHHHHHhcCC-eEEEEeC
Q 005071 365 RKCLLLGAGTLGCQVARMLMAWGVR-KITLLDN 396 (715)
Q Consensus 365 ~kVlIvGaGgLGs~VA~~La~~GVg-~ItLVD~ 396 (715)
.||.|||+|.+|+.+|+.|.+.|.. +++++|.
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~ 34 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDI 34 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECS
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 4799999999999999999999963 6877765
No 170
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=94.44 E-value=0.19 Score=50.32 Aligned_cols=35 Identities=26% Similarity=0.415 Sum_probs=29.5
Q ss_pred hhccCeEEEEc-CChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 361 ILSSRKCLLLG-AGTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 361 kL~~~kVlIvG-aGgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
.+++++++|.| .||+|..+|+.|++.|. ++.++|.
T Consensus 4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r 39 (247)
T 2jah_A 4 ALQGKVALITGASSGIGEATARALAAEGA-AVAIAAR 39 (247)
T ss_dssp TTTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEEC
Confidence 36788999997 57999999999999996 5777765
No 171
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=94.41 E-value=0.16 Score=52.18 Aligned_cols=35 Identities=31% Similarity=0.308 Sum_probs=28.8
Q ss_pred hhccCeEEEEcC-ChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 361 kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
.+++++|+|.|+ ||+|..+|+.|++.|. ++.++|.
T Consensus 25 ~~~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r 60 (283)
T 3v8b_A 25 NQPSPVALITGAGSGIGRATALALAADGV-TVGALGR 60 (283)
T ss_dssp --CCCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeC
Confidence 467889999985 7999999999999997 6777775
No 172
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=94.41 E-value=0.18 Score=51.23 Aligned_cols=95 Identities=20% Similarity=0.121 Sum_probs=59.1
Q ss_pred hhccCeEEEEcC-ChHHHHHHHHHHHhcCCeEEEEeCCcccccCCCcCCCCCcchhcCCCCcHHHHHHHHHHhhCCCcEE
Q 005071 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAA 439 (715)
Q Consensus 361 kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~~KAeaaa~~L~~inP~v~v 439 (715)
.+++++|+|.|+ ||+|..+|+.|++.|. ++.++|...-..+...+. .. ...+.+.+++.+....+ ++
T Consensus 8 ~l~~k~~lVTGas~GIG~a~a~~la~~G~-~V~~~~r~~~~~~~~~~~----~~-----~~~~~~~~~~~~~~~~~--~~ 75 (277)
T 3tsc_A 8 KLEGRVAFITGAARGQGRAHAVRMAAEGA-DIIAVDIAGKLPSCVPYD----PA-----SPDDLSETVRLVEAANR--RI 75 (277)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCCTTCCSC----CC-----CHHHHHHHHHHHHHTTC--CE
T ss_pred ccCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEecccccccccccc----cc-----CHHHHHHHHHHHHhcCC--eE
Confidence 578899999985 7999999999999997 688888753222222221 11 23355556666666544 45
Q ss_pred EEEecccCCCCCCCCCccccccccchhhHHHh-------hccCCEEEEeCC
Q 005071 440 EGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDL-------ILSHDVIFLLTD 483 (715)
Q Consensus 440 ~~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~l-------i~~~DvV~~~tD 483 (715)
..+..++ .+.+.+.++ +...|++|.+..
T Consensus 76 ~~~~~D~----------------~~~~~v~~~~~~~~~~~g~id~lvnnAg 110 (277)
T 3tsc_A 76 VAAVVDT----------------RDFDRLRKVVDDGVAALGRLDIIVANAG 110 (277)
T ss_dssp EEEECCT----------------TCHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred EEEECCC----------------CCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 5555444 123333333 346899998764
No 173
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=94.41 E-value=0.15 Score=50.12 Aligned_cols=32 Identities=25% Similarity=0.329 Sum_probs=26.9
Q ss_pred cCeEEEEcC-ChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 364 SRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 364 ~~kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
.++|+|.|+ ||+|..+|+.|++.|.. +.++|.
T Consensus 2 ~k~vlITGas~gIG~~ia~~l~~~G~~-V~~~~r 34 (235)
T 3l77_A 2 MKVAVITGASRGIGEAIARALARDGYA-LALGAR 34 (235)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHTTCE-EEEEES
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCE-EEEEeC
Confidence 567899985 78999999999999964 777765
No 174
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=94.39 E-value=0.19 Score=49.51 Aligned_cols=33 Identities=27% Similarity=0.391 Sum_probs=27.8
Q ss_pred hccCeEEEEc-CChHHHHHHHHHHHhcCCeEEEEe
Q 005071 362 LSSRKCLLLG-AGTLGCQVARMLMAWGVRKITLLD 395 (715)
Q Consensus 362 L~~~kVlIvG-aGgLGs~VA~~La~~GVg~ItLVD 395 (715)
+++++|+|.| .|++|..+|+.|+..|. +++++|
T Consensus 3 l~~~~vlItGasggiG~~~a~~l~~~G~-~V~~~~ 36 (247)
T 2hq1_A 3 LKGKTAIVTGSSRGLGKAIAWKLGNMGA-NIVLNG 36 (247)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEE
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEc
Confidence 5678899997 57999999999999996 566664
No 175
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=94.37 E-value=0.16 Score=51.03 Aligned_cols=35 Identities=20% Similarity=0.349 Sum_probs=30.0
Q ss_pred hhccCeEEEEcC-ChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 361 kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
.+++++|+|.|+ ||+|..+|+.|++.|. ++.++|.
T Consensus 5 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r 40 (259)
T 4e6p_A 5 RLEGKSALITGSARGIGRAFAEAYVREGA-TVAIADI 40 (259)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred cCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence 467889999984 8999999999999996 5777775
No 176
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=94.35 E-value=0.1 Score=58.37 Aligned_cols=36 Identities=14% Similarity=0.338 Sum_probs=29.8
Q ss_pred hhccCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeCC
Q 005071 361 ILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNG 397 (715)
Q Consensus 361 kL~~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~D 397 (715)
.+..++|.|||+|..|+.+|++|++.|. +++++|.+
T Consensus 12 ~~~~~~IgvIGlG~MG~~lA~~La~~G~-~V~v~~r~ 47 (480)
T 2zyd_A 12 HMSKQQIGVVGMAVMGRNLALNIESRGY-TVSIFNRS 47 (480)
T ss_dssp ---CBSEEEECCSHHHHHHHHHHHTTTC-CEEEECSS
T ss_pred ccCCCeEEEEccHHHHHHHHHHHHhCCC-eEEEEeCC
Confidence 4667899999999999999999999996 68888764
No 177
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=94.34 E-value=0.13 Score=52.38 Aligned_cols=36 Identities=19% Similarity=0.249 Sum_probs=30.0
Q ss_pred HhhccCeEEEEcC-ChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 360 DILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 360 ~kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
..+++++|+|.|+ ||+|..+|+.|++.|. ++.++|.
T Consensus 24 ~~l~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r 60 (270)
T 3ftp_A 24 KTLDKQVAIVTGASRGIGRAIALELARRGA-MVIGTAT 60 (270)
T ss_dssp CTTTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeC
Confidence 3577888999875 7999999999999997 6777665
No 178
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=94.34 E-value=0.12 Score=52.39 Aligned_cols=35 Identities=20% Similarity=0.405 Sum_probs=30.8
Q ss_pred hhccCeEEEEcCC---hHHHHHHHHHHHhcCCeEEEEeC
Q 005071 361 ILSSRKCLLLGAG---TLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 361 kL~~~kVlIvGaG---gLGs~VA~~La~~GVg~ItLVD~ 396 (715)
.|+++.++|-|++ |+|-.+|+.|++.|. ++.++|.
T Consensus 3 ~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga-~Vvi~~r 40 (256)
T 4fs3_A 3 NLENKTYVIMGIANKRSIAFGVAKVLDQLGA-KLVFTYR 40 (256)
T ss_dssp CCTTCEEEEECCCSTTCHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHHHCCC-EEEEEEC
Confidence 4789999999984 899999999999996 6888775
No 179
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=94.33 E-value=0.092 Score=53.45 Aligned_cols=30 Identities=20% Similarity=0.369 Sum_probs=26.3
Q ss_pred CeEEEEcCChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 365 RKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 365 ~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
.||.|||+|.+|+.+|+.|+. |. +++++|.
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~-g~-~V~~~~~ 31 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR-RF-PTLVWNR 31 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT-TS-CEEEECS
T ss_pred CeEEEEcccHHHHHHHHHHhC-CC-eEEEEeC
Confidence 379999999999999999999 96 5777765
No 180
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=94.32 E-value=0.082 Score=54.83 Aligned_cols=36 Identities=22% Similarity=0.373 Sum_probs=30.8
Q ss_pred hhccCeEEEEcC-ChHHHHHHHHHHHhcCCeEEEEeCC
Q 005071 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNG 397 (715)
Q Consensus 361 kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD~D 397 (715)
.+++++|+|.|+ ||+|..+|+.|++.|. ++.++|.+
T Consensus 38 ~l~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~ 74 (293)
T 3rih_A 38 DLSARSVLVTGGTKGIGRGIATVFARAGA-NVAVAARS 74 (293)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECC
Confidence 467889999975 7999999999999997 78888763
No 181
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=94.31 E-value=0.15 Score=51.85 Aligned_cols=36 Identities=28% Similarity=0.503 Sum_probs=30.9
Q ss_pred hhccCeEEEEcC-ChHHHHHHHHHHHhcCCeEEEEeCC
Q 005071 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNG 397 (715)
Q Consensus 361 kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD~D 397 (715)
.+++++|+|.|+ ||+|..+|+.|++.|. ++.++|.+
T Consensus 8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~ 44 (271)
T 3tzq_B 8 ELENKVAIITGACGGIGLETSRVLARAGA-RVVLADLP 44 (271)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECT
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEcCC
Confidence 467889999985 8999999999999996 68888763
No 182
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=94.31 E-value=0.16 Score=51.92 Aligned_cols=62 Identities=21% Similarity=0.262 Sum_probs=40.3
Q ss_pred HhhccCeEEEEcC-ChHHHHHHHHHHHhcCCeEEEEeCCcccccCCCcCCCCCcchhcCCCCcHHHHHHHHHHhhCCCcE
Q 005071 360 DILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVA 438 (715)
Q Consensus 360 ~kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~~KAeaaa~~L~~inP~v~ 438 (715)
..+++++|+|.|+ ||+|..+|+.|++.|.. +.++|.+ ..+.+.+++.+++... +
T Consensus 20 ~m~~~k~~lVTGas~GIG~aia~~la~~G~~-V~~~~r~----------------------~~~~~~~~~~l~~~~~--~ 74 (279)
T 3sju_A 20 HMSRPQTAFVTGVSSGIGLAVARTLAARGIA-VYGCARD----------------------AKNVSAAVDGLRAAGH--D 74 (279)
T ss_dssp -----CEEEEESTTSHHHHHHHHHHHHTTCE-EEEEESC----------------------HHHHHHHHHHHHTTTC--C
T ss_pred cccCCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEeCC----------------------HHHHHHHHHHHHhcCC--c
Confidence 4467788999985 89999999999999964 7776652 2345566666766543 4
Q ss_pred EEEEeccc
Q 005071 439 AEGVVMAI 446 (715)
Q Consensus 439 v~~~~~~I 446 (715)
+..+..++
T Consensus 75 ~~~~~~Dv 82 (279)
T 3sju_A 75 VDGSSCDV 82 (279)
T ss_dssp EEEEECCT
T ss_pred EEEEECCC
Confidence 55555444
No 183
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=94.30 E-value=0.14 Score=53.91 Aligned_cols=32 Identities=34% Similarity=0.517 Sum_probs=29.3
Q ss_pred eEEEEcCChHHHHHHHHHHHhcCCeEEEEeCC
Q 005071 366 KCLLLGAGTLGCQVARMLMAWGVRKITLLDNG 397 (715)
Q Consensus 366 kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~D 397 (715)
||.|+|+|.+|..+|..|+..|+++|+|+|-+
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~~l~el~L~Di~ 32 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMRGYDDLLLIART 32 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCSCEEEECSS
T ss_pred CEEEECcCHHHHHHHHHHHhCCCCEEEEEcCC
Confidence 69999999999999999999999679999974
No 184
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=94.30 E-value=0.23 Score=51.27 Aligned_cols=32 Identities=34% Similarity=0.553 Sum_probs=26.9
Q ss_pred cCeEEEEc-CChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 364 SRKCLLLG-AGTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 364 ~~kVlIvG-aGgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
+++|+|.| .|++|..+++.|+..|. +++++|.
T Consensus 5 ~~~vlVTGatG~iG~~l~~~L~~~G~-~V~~~~r 37 (341)
T 3enk_A 5 KGTILVTGGAGYIGSHTAVELLAHGY-DVVIADN 37 (341)
T ss_dssp SCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECC
T ss_pred CcEEEEecCCcHHHHHHHHHHHHCCC-cEEEEec
Confidence 56899998 59999999999999995 5666665
No 185
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=94.29 E-value=0.11 Score=52.75 Aligned_cols=36 Identities=28% Similarity=0.479 Sum_probs=30.5
Q ss_pred HhhccCeEEEEcC-ChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 360 DILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 360 ~kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
-+|++++|+|.|+ ||+|..+|+.|++.|. ++.++|.
T Consensus 16 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r 52 (266)
T 4egf_A 16 LRLDGKRALITGATKGIGADIARAFAAAGA-RLVLSGR 52 (266)
T ss_dssp GCCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence 3578899999985 7999999999999996 4778776
No 186
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=94.28 E-value=0.097 Score=55.58 Aligned_cols=34 Identities=24% Similarity=0.402 Sum_probs=30.7
Q ss_pred cCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeCC
Q 005071 364 SRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNG 397 (715)
Q Consensus 364 ~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~D 397 (715)
..||.|+|+|..|..+|..|+..|...++|+|.+
T Consensus 14 ~~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~ 47 (328)
T 2hjr_A 14 RKKISIIGAGQIGSTIALLLGQKDLGDVYMFDII 47 (328)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 3689999999999999999999998559999974
No 187
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=94.26 E-value=0.16 Score=50.95 Aligned_cols=36 Identities=25% Similarity=0.581 Sum_probs=30.2
Q ss_pred HhhccCeEEEEc-CChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 360 DILSSRKCLLLG-AGTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 360 ~kL~~~kVlIvG-aGgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
..+++++|+|.| .||+|..+|+.|++.|. +++++|.
T Consensus 12 ~~l~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r 48 (278)
T 2bgk_A 12 NRLQDKVAIITGGAGGIGETTAKLFVRYGA-KVVIADI 48 (278)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred ccccCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcC
Confidence 357788999998 57999999999999996 6777665
No 188
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=94.26 E-value=0.13 Score=53.85 Aligned_cols=33 Identities=27% Similarity=0.430 Sum_probs=29.6
Q ss_pred CeEEEEcCChHHHHHHHHHHHhcC-CeEEEEeCC
Q 005071 365 RKCLLLGAGTLGCQVARMLMAWGV-RKITLLDNG 397 (715)
Q Consensus 365 ~kVlIvGaGgLGs~VA~~La~~GV-g~ItLVD~D 397 (715)
.||.|+|+|.+|+.+|..|+..|. ++++|+|.+
T Consensus 1 mkI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~ 34 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLRGSCSELVLVDRD 34 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 389999999999999999999994 689999974
No 189
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=94.25 E-value=0.041 Score=60.07 Aligned_cols=37 Identities=22% Similarity=0.504 Sum_probs=35.5
Q ss_pred hhccCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeCC
Q 005071 361 ILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNG 397 (715)
Q Consensus 361 kL~~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~D 397 (715)
+|+..||+|+|+|..|..+|+.|+..|+++|+++|..
T Consensus 189 ~l~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 189 KIEEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp CTTTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CCCCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 6889999999999999999999999999999999985
No 190
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=94.24 E-value=0.12 Score=52.90 Aligned_cols=31 Identities=29% Similarity=0.402 Sum_probs=25.2
Q ss_pred eEEEEcC-ChHHHHHHHHHHHh-cCCeEEEEeC
Q 005071 366 KCLLLGA-GTLGCQVARMLMAW-GVRKITLLDN 396 (715)
Q Consensus 366 kVlIvGa-GgLGs~VA~~La~~-GVg~ItLVD~ 396 (715)
||+|+|| |..|..+++.+... |+.=..++|.
T Consensus 2 kV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~ 34 (245)
T 1p9l_A 2 RVGVLGAKGKVGTTMVRAVAAADDLTLSAELDA 34 (245)
T ss_dssp EEEEETTTSHHHHHHHHHHHHCTTCEEEEEECT
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEcc
Confidence 7999997 99999999998866 7655556665
No 191
>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*
Probab=94.23 E-value=0.1 Score=52.29 Aligned_cols=63 Identities=16% Similarity=0.146 Sum_probs=46.9
Q ss_pred hhccCeEEEEc-CChHHHHHHHHHHH---hcCCeEEEEeCCcccccCCCcCCCCCcchhcCCCCcHHHHHHHHHHhhCCC
Q 005071 361 ILSSRKCLLLG-AGTLGCQVARMLMA---WGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPA 436 (715)
Q Consensus 361 kL~~~kVlIvG-aGgLGs~VA~~La~---~GVg~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~~KAeaaa~~L~~inP~ 436 (715)
.|++++|+|.| .||+|..+|+.|++ .|. ++.++|.+ ..+.+.+++.+.+.+|+
T Consensus 3 ~l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~-~V~~~~r~----------------------~~~~~~~~~~l~~~~~~ 59 (259)
T 1oaa_A 3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGS-VMLVSARS----------------------ESMLRQLKEELGAQQPD 59 (259)
T ss_dssp CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTC-EEEEEESC----------------------HHHHHHHHHHHHHHCTT
T ss_pred CCCCcEEEEeCCCChHHHHHHHHHHHhhcCCC-eEEEEeCC----------------------HHHHHHHHHHHHhhCCC
Confidence 36678888887 57999999999999 786 67777642 22455666777777777
Q ss_pred cEEEEEeccc
Q 005071 437 VAAEGVVMAI 446 (715)
Q Consensus 437 v~v~~~~~~I 446 (715)
.++..+..++
T Consensus 60 ~~~~~~~~Dv 69 (259)
T 1oaa_A 60 LKVVLAAADL 69 (259)
T ss_dssp SEEEEEECCT
T ss_pred CeEEEEecCC
Confidence 7888777655
No 192
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=94.23 E-value=0.18 Score=51.08 Aligned_cols=35 Identities=20% Similarity=0.228 Sum_probs=30.0
Q ss_pred hhccCeEEEEc-CChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 361 ILSSRKCLLLG-AGTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 361 kL~~~kVlIvG-aGgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
.+++++|+|.| .||+|..+|+.|+..|. +++++|.
T Consensus 28 ~l~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r 63 (272)
T 1yb1_A 28 SVTGEIVLITGAGHGIGRLTAYEFAKLKS-KLVLWDI 63 (272)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEEc
Confidence 47789999997 57999999999999996 5777775
No 193
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=94.23 E-value=0.13 Score=54.02 Aligned_cols=32 Identities=28% Similarity=0.267 Sum_probs=28.9
Q ss_pred eEEEEcCChHHHHHHHHHHHhcC-CeEEEEeCC
Q 005071 366 KCLLLGAGTLGCQVARMLMAWGV-RKITLLDNG 397 (715)
Q Consensus 366 kVlIvGaGgLGs~VA~~La~~GV-g~ItLVD~D 397 (715)
||.|+|+|.+|..+|..|+..|. .+++|+|.+
T Consensus 2 kI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~ 34 (294)
T 1oju_A 2 KLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIA 34 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHHSCCSEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEECC
Confidence 79999999999999999999996 489998863
No 194
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=94.22 E-value=0.064 Score=60.37 Aligned_cols=35 Identities=20% Similarity=0.467 Sum_probs=31.8
Q ss_pred hhccCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 361 ILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 361 kL~~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
.+.+++|+|+|+|.+|..+|+.|...|. +++.+|.
T Consensus 271 ~l~GktV~IiG~G~IG~~~A~~lka~Ga-~Viv~d~ 305 (494)
T 3ce6_A 271 LIGGKKVLICGYGDVGKGCAEAMKGQGA-RVSVTEI 305 (494)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECS
T ss_pred CCCcCEEEEEccCHHHHHHHHHHHHCCC-EEEEEeC
Confidence 4678999999999999999999999997 7888776
No 195
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=94.22 E-value=0.044 Score=57.51 Aligned_cols=33 Identities=18% Similarity=0.398 Sum_probs=29.6
Q ss_pred CeEEEEcCChHHHHHHHHHHHhcCCeEEEEeCCc
Q 005071 365 RKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGR 398 (715)
Q Consensus 365 ~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~D~ 398 (715)
.||+|+|+|.+|+.+|..|++.|. .++++|.+.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~-~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGH-CVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTC-EEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHhCCC-eEEEEeCCh
Confidence 589999999999999999999994 899988753
No 196
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=94.20 E-value=0.29 Score=49.60 Aligned_cols=95 Identities=18% Similarity=0.097 Sum_probs=58.6
Q ss_pred HhhccCeEEEEcC-ChHHHHHHHHHHHhcCCeEEEEeCCcccccCCCcCCCCCcchhcCCCCcHHHHHHHHHHhhCCCcE
Q 005071 360 DILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVA 438 (715)
Q Consensus 360 ~kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~~KAeaaa~~L~~inP~v~ 438 (715)
..+++++|+|.|+ ||+|..+|+.|++.|. ++.++|...-...+-.. . - ...+.+.+++.+.... .+
T Consensus 6 ~~l~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~-----~--~---~~~~~~~~~~~~~~~~--~~ 72 (287)
T 3pxx_A 6 GRVQDKVVLVTGGARGQGRSHAVKLAEEGA-DIILFDICHDIETNEYP-----L--A---TSRDLEEAGLEVEKTG--RK 72 (287)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTSCSC-----C--C---CHHHHHHHHHHHHHTT--SC
T ss_pred cccCCCEEEEeCCCChHHHHHHHHHHHCCC-eEEEEcccccccccccc-----h--h---hhHHHHHHHHHHHhcC--Cc
Confidence 3578899999985 6999999999999996 58888875321111000 0 0 2334555666666654 35
Q ss_pred EEEEecccCCCCCCCCCccccccccchhhHHHhh-------ccCCEEEEeCC
Q 005071 439 AEGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLI-------LSHDVIFLLTD 483 (715)
Q Consensus 439 v~~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li-------~~~DvV~~~tD 483 (715)
+..+..++ .+.+.+.+++ ...|+||.+..
T Consensus 73 ~~~~~~D~----------------~~~~~v~~~~~~~~~~~g~id~lv~nAg 108 (287)
T 3pxx_A 73 AYTAEVDV----------------RDRAAVSRELANAVAEFGKLDVVVANAG 108 (287)
T ss_dssp EEEEECCT----------------TCHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred eEEEEccC----------------CCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 55565544 1233333333 37899998754
No 197
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=94.19 E-value=0.22 Score=50.55 Aligned_cols=34 Identities=18% Similarity=0.357 Sum_probs=29.2
Q ss_pred hccCeEEEEcC-ChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 362 LSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 362 L~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
+++++|+|.|+ ||+|..+|+.|++.|. ++.++|.
T Consensus 19 l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r 53 (273)
T 1ae1_A 19 LKGTTALVTGGSKGIGYAIVEELAGLGA-RVYTCSR 53 (273)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCEEEEECCcchHHHHHHHHHHHCCC-EEEEEeC
Confidence 67889999985 8999999999999996 5777765
No 198
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=94.18 E-value=0.13 Score=54.11 Aligned_cols=108 Identities=15% Similarity=0.186 Sum_probs=62.4
Q ss_pred CeEEEEcCChHHHHHHHHHHHhcC------CeEEEEeCCcccccCCCcCCCCCcchhcCCCCcHHHHHHHHHHhhCCCcE
Q 005071 365 RKCLLLGAGTLGCQVARMLMAWGV------RKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVA 438 (715)
Q Consensus 365 ~kVlIvGaGgLGs~VA~~La~~GV------g~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~~KAeaaa~~L~~inP~v~ 438 (715)
.||.|||+|.+|+.+|..|++.|. .+++++|.+.- .. ++.+++.+.+.- .++..
T Consensus 9 mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~--------------~~---~~~~~~~l~~~~--~~~~~- 68 (354)
T 1x0v_A 9 KKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEED--------------IG---GKKLTEIINTQH--ENVKY- 68 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCB--------------SS---SSBHHHHHHHHS--CCTTT-
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChh--------------hh---hhHHHHHHHhcC--ccccc-
Confidence 489999999999999999999993 57899886421 01 233454443221 11100
Q ss_pred EEEEecccCCCCCCCCCccccccccchhhHHHhhccCCEEEEeCCChHHHHHHHHHHHh--cCCeEEEee
Q 005071 439 AEGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTRESRWLPTLLCAN--TNKITITAA 506 (715)
Q Consensus 439 v~~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~esR~li~~~~~~--~~kp~I~aa 506 (715)
.||..+.. ... ......+.++++|+||.|+=....+.++..+... .+..+|+..
T Consensus 69 ---------~~~~~~~~----~~~-~~~~~~~~~~~aD~Vilav~~~~~~~v~~~i~~~l~~~~ivv~~~ 124 (354)
T 1x0v_A 69 ---------LPGHKLPP----NVV-AVPDVVQAAEDADILIFVVPHQFIGKICDQLKGHLKANATGISLI 124 (354)
T ss_dssp ---------STTCCCCT----TEE-EESSHHHHHTTCSEEEECCCGGGHHHHHHHHTTCSCTTCEEEECC
T ss_pred ---------CCcccCcc----CeE-EEcCHHHHHcCCCEEEEeCCHHHHHHHHHHHHhhCCCCCEEEEEC
Confidence 01100000 000 1123445678899999999776666666655432 345666653
No 199
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=94.18 E-value=0.099 Score=58.14 Aligned_cols=92 Identities=23% Similarity=0.304 Sum_probs=64.3
Q ss_pred CeEEEEcCChHHHHHHHHHHHhcCCeEEEEeCCcccccCCCcCCCCCcchhcCCCCcHHHHHHHHHHhhCCCcEEEEEec
Q 005071 365 RKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEGVVM 444 (715)
Q Consensus 365 ~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~~KAeaaa~~L~~inP~v~v~~~~~ 444 (715)
-||+|+|+|-+|..+|+.|...| ..+++||.|. .+++. +.+.. + +..+.
T Consensus 4 M~iiI~G~G~vG~~la~~L~~~~-~~v~vId~d~----------------------~~~~~----~~~~~-~--~~~i~- 52 (461)
T 4g65_A 4 MKIIILGAGQVGGTLAENLVGEN-NDITIVDKDG----------------------DRLRE----LQDKY-D--LRVVN- 52 (461)
T ss_dssp EEEEEECCSHHHHHHHHHTCSTT-EEEEEEESCH----------------------HHHHH----HHHHS-S--CEEEE-
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CCEEEEECCH----------------------HHHHH----HHHhc-C--cEEEE-
Confidence 37999999999999999999888 5799999842 12222 22222 2 23333
Q ss_pred ccCCCCCCCCCccccccccchhhHHHh-hccCCEEEEeCCChHHHHHHHHHHHhc-CCeE
Q 005071 445 AIPMPGHPVPCQEEDSVLDDCRRLTDL-ILSHDVIFLLTDTRESRWLPTLLCANT-NKIT 502 (715)
Q Consensus 445 ~Ipmpgh~~~~~~~~~~~~~~~~l~~l-i~~~DvV~~~tDs~esR~li~~~~~~~-~kp~ 502 (715)
|++ .+.+-+.+. ++++|+++-+|++-+.-.+...+|+.. +.+-
T Consensus 53 -----Gd~----------~~~~~L~~Agi~~ad~~ia~t~~De~Nl~~~~~Ak~~~~~~~ 97 (461)
T 4g65_A 53 -----GHA----------SHPDVLHEAGAQDADMLVAVTNTDETNMAACQVAFTLFNTPN 97 (461)
T ss_dssp -----SCT----------TCHHHHHHHTTTTCSEEEECCSCHHHHHHHHHHHHHHHCCSS
T ss_pred -----EcC----------CCHHHHHhcCCCcCCEEEEEcCChHHHHHHHHHHHHhcCCcc
Confidence 221 234445443 789999999999999999999998875 5543
No 200
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=94.17 E-value=0.12 Score=53.09 Aligned_cols=37 Identities=24% Similarity=0.374 Sum_probs=31.2
Q ss_pred HhhccCeEEEEcC-ChHHHHHHHHHHHhcCCeEEEEeCC
Q 005071 360 DILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNG 397 (715)
Q Consensus 360 ~kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD~D 397 (715)
-.+++++|+|.|+ ||+|..+|+.|++.|. ++.++|.+
T Consensus 12 ~~l~gk~vlVTGas~gIG~~~a~~L~~~G~-~V~~~~r~ 49 (291)
T 3rd5_A 12 PSFAQRTVVITGANSGLGAVTARELARRGA-TVIMAVRD 49 (291)
T ss_dssp CCCTTCEEEEECCSSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred cCCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEECC
Confidence 3577899999985 8999999999999995 68887763
No 201
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=94.17 E-value=0.15 Score=53.91 Aligned_cols=33 Identities=24% Similarity=0.460 Sum_probs=29.9
Q ss_pred CeEEEEcCChHHHHHHHHHHHhcCCeEEEEeCC
Q 005071 365 RKCLLLGAGTLGCQVARMLMAWGVRKITLLDNG 397 (715)
Q Consensus 365 ~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~D 397 (715)
.||.|||+|.+|..+|..|+..|...++|+|-+
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~ 37 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIV 37 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCC
Confidence 589999999999999999999998559999864
No 202
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=94.17 E-value=0.065 Score=55.00 Aligned_cols=31 Identities=23% Similarity=0.418 Sum_probs=27.6
Q ss_pred CeEEEEcCChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 365 RKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 365 ~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
.||.|||+|.+|+.+++.|...|. +++++|.
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~ 36 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGY-SLVVSDR 36 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTC-EEEEECS
T ss_pred ceEEEECchHHHHHHHHHHHhCCC-EEEEEeC
Confidence 489999999999999999999996 5788775
No 203
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=94.16 E-value=0.26 Score=49.47 Aligned_cols=34 Identities=18% Similarity=0.318 Sum_probs=29.0
Q ss_pred hccCeEEEEc-CChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 362 LSSRKCLLLG-AGTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 362 L~~~kVlIvG-aGgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
+++++|+|.| .||+|..+|+.|++.|. ++.++|.
T Consensus 7 l~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r 41 (260)
T 2ae2_A 7 LEGCTALVTGGSRGIGYGIVEELASLGA-SVYTCSR 41 (260)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence 5688999998 57999999999999996 5777765
No 204
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=94.16 E-value=0.21 Score=49.87 Aligned_cols=34 Identities=29% Similarity=0.389 Sum_probs=29.1
Q ss_pred hccCeEEEEc-CChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 362 LSSRKCLLLG-AGTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 362 L~~~kVlIvG-aGgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
+++++|+|.| .||+|..+++.|+..|. +++++|.
T Consensus 10 ~~~k~vlVTGasggiG~~~a~~l~~~G~-~V~~~~r 44 (265)
T 2o23_A 10 VKGLVAVITGGASGLGLATAERLVGQGA-SAVLLDL 44 (265)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEEC
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeC
Confidence 6788999997 57999999999999996 5777765
No 205
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=94.15 E-value=0.12 Score=52.62 Aligned_cols=30 Identities=23% Similarity=0.283 Sum_probs=27.2
Q ss_pred eEEEEcCChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 366 KCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 366 kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
||.|||+|.+|+.+|+.|.+.|. +++++|.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~ 31 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGH-YLIGVSR 31 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC-EEEEECS
T ss_pred EEEEEcCcHHHHHHHHHHHHCCC-EEEEEEC
Confidence 79999999999999999999997 6888765
No 206
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=94.14 E-value=0.15 Score=53.74 Aligned_cols=33 Identities=30% Similarity=0.431 Sum_probs=29.4
Q ss_pred cCeEEEEcCChHHHHHHHHHHHhcCC-eEEEEeC
Q 005071 364 SRKCLLLGAGTLGCQVARMLMAWGVR-KITLLDN 396 (715)
Q Consensus 364 ~~kVlIvGaGgLGs~VA~~La~~GVg-~ItLVD~ 396 (715)
-.||.|||+|.+|..+|+.|.+.|.. +++++|.
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr 66 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDI 66 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECS
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEEC
Confidence 46899999999999999999999974 7888776
No 207
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=94.10 E-value=0.19 Score=50.35 Aligned_cols=34 Identities=18% Similarity=0.377 Sum_probs=28.8
Q ss_pred hccCeEEEEc-CChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 362 LSSRKCLLLG-AGTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 362 L~~~kVlIvG-aGgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
+++++|+|.| .||+|..+++.|++.|. +++++|.
T Consensus 12 l~~k~vlITGasggiG~~la~~l~~~G~-~V~~~~r 46 (266)
T 1xq1_A 12 LKAKTVLVTGGTKGIGHAIVEEFAGFGA-VIHTCAR 46 (266)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeC
Confidence 5678899997 58999999999999996 6777765
No 208
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=94.10 E-value=0.3 Score=50.00 Aligned_cols=67 Identities=19% Similarity=0.220 Sum_probs=46.1
Q ss_pred hccCeEEEEcC-ChHHHHHHHHHHHhcCCeEEEEeCCcccccCCCcCCCCCcchhcCCCCcHHHHHHHHHHhhCCCcEEE
Q 005071 362 LSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAE 440 (715)
Q Consensus 362 L~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~~KAeaaa~~L~~inP~v~v~ 440 (715)
+++++|+|.|+ ||+|..+|+.|++.|. ++.++|.+.-.... + ..+.+.+++.+.+..+ ++.
T Consensus 7 l~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~-----------~----~~~~~~~~~~~~~~~~--~~~ 68 (285)
T 3sc4_A 7 LRGKTMFISGGSRGIGLAIAKRVAADGA-NVALVAKSAEPHPK-----------L----PGTIYTAAKEIEEAGG--QAL 68 (285)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHTTTC-EEEEEESCCSCCSS-----------S----CCCHHHHHHHHHHHTS--EEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECChhhhhh-----------h----hHHHHHHHHHHHhcCC--cEE
Confidence 67889999985 7999999999999997 78888875422111 1 1244555666666643 566
Q ss_pred EEeccc
Q 005071 441 GVVMAI 446 (715)
Q Consensus 441 ~~~~~I 446 (715)
.+..++
T Consensus 69 ~~~~Dv 74 (285)
T 3sc4_A 69 PIVGDI 74 (285)
T ss_dssp EEECCT
T ss_pred EEECCC
Confidence 666544
No 209
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=94.10 E-value=0.11 Score=51.56 Aligned_cols=33 Identities=18% Similarity=0.291 Sum_probs=27.7
Q ss_pred ccCeEEEEc-CChHHHHHHHHHHH-hcCCeEEEEeC
Q 005071 363 SSRKCLLLG-AGTLGCQVARMLMA-WGVRKITLLDN 396 (715)
Q Consensus 363 ~~~kVlIvG-aGgLGs~VA~~La~-~GVg~ItLVD~ 396 (715)
++++|+|.| .|++|..+|+.|+. .|. ++++++.
T Consensus 3 ~~k~vlITGasggIG~~~a~~L~~~~g~-~V~~~~r 37 (276)
T 1wma_A 3 GIHVALVTGGNKGIGLAIVRDLCRLFSG-DVVLTAR 37 (276)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHHSSS-EEEEEES
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHhcCC-eEEEEeC
Confidence 467888887 58999999999999 896 6777775
No 210
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=94.08 E-value=0.046 Score=59.77 Aligned_cols=39 Identities=28% Similarity=0.438 Sum_probs=36.7
Q ss_pred HhhccCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeCCc
Q 005071 360 DILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGR 398 (715)
Q Consensus 360 ~kL~~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~D~ 398 (715)
.+++..||+|+|+|..|..+|+.|+.+|+++|+++|..-
T Consensus 184 ~~l~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~G 222 (398)
T 2a9f_A 184 KSLDEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFG 222 (398)
T ss_dssp CCTTSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTE
T ss_pred CCCCccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 478889999999999999999999999999999999974
No 211
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=94.08 E-value=0.088 Score=54.10 Aligned_cols=35 Identities=20% Similarity=0.334 Sum_probs=29.5
Q ss_pred hhccCeEEEEcC-ChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 361 kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
.+++++|+|.|+ ||+|..+|+.|++.|. ++.++|.
T Consensus 5 ~l~gk~vlVTGas~GIG~aia~~la~~G~-~V~~~~r 40 (280)
T 3tox_A 5 RLEGKIAIVTGASSGIGRAAALLFAREGA-KVVVTAR 40 (280)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEECCS
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEEC
Confidence 477889999985 7999999999999997 4777665
No 212
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=94.07 E-value=0.16 Score=51.95 Aligned_cols=36 Identities=25% Similarity=0.304 Sum_probs=30.7
Q ss_pred HhhccCeEEEEcC-ChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 360 DILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 360 ~kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
-.|++++|+|.|+ ||+|..+|+.|++.|. ++.++|.
T Consensus 29 ~~l~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r 65 (275)
T 4imr_A 29 FGLRGRTALVTGSSRGIGAAIAEGLAGAGA-HVILHGV 65 (275)
T ss_dssp HCCTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcC
Confidence 3578899999985 7999999999999997 6778775
No 213
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=94.06 E-value=0.19 Score=50.38 Aligned_cols=36 Identities=31% Similarity=0.524 Sum_probs=31.2
Q ss_pred HhhccCeEEEEcC-ChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 360 DILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 360 ~kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
..|++++|+|.|+ ||+|..+|+.|++.|. ++.++|.
T Consensus 8 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r 44 (252)
T 3f1l_A 8 DLLNDRIILVTGASDGIGREAAMTYARYGA-TVILLGR 44 (252)
T ss_dssp TTTTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred cccCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeC
Confidence 4578999999985 7999999999999997 6888775
No 214
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=94.06 E-value=0.24 Score=50.51 Aligned_cols=35 Identities=23% Similarity=0.353 Sum_probs=29.5
Q ss_pred hhccCeEEEEc-CChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 361 ILSSRKCLLLG-AGTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 361 kL~~~kVlIvG-aGgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
.+++++|+|.| .||+|..+|+.|++.|. ++.++|.
T Consensus 19 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r 54 (277)
T 2rhc_B 19 TQDSEVALVTGATSGIGLEIARRLGKEGL-RVFVCAR 54 (277)
T ss_dssp CTTSCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeC
Confidence 36788999997 57999999999999996 5777765
No 215
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=94.05 E-value=0.26 Score=54.80 Aligned_cols=98 Identities=18% Similarity=0.269 Sum_probs=70.7
Q ss_pred hccCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeCCcccccCCCcCCCCCcchhcCCCCcHHHHHHHHHHhhCCCcEEEE
Q 005071 362 LSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEG 441 (715)
Q Consensus 362 L~~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~~KAeaaa~~L~~inP~v~v~~ 441 (715)
-..++|+|+|.|-+|.++|+.|-. + .++++++. .+.|++.+++.| |.+.+
T Consensus 233 ~~~~~v~I~GgG~ig~~lA~~L~~-~-~~v~iIE~----------------------d~~r~~~la~~l----~~~~V-- 282 (461)
T 4g65_A 233 KPYRRIMIVGGGNIGASLAKRLEQ-T-YSVKLIER----------------------NLQRAEKLSEEL----ENTIV-- 282 (461)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHTT-T-SEEEEEES----------------------CHHHHHHHHHHC----TTSEE--
T ss_pred ccccEEEEEcchHHHHHHHHHhhh-c-CceEEEec----------------------CHHHHHHHHHHC----CCceE--
Confidence 346799999999999999999854 3 57777766 344666666654 54443
Q ss_pred EecccCCCCCCCCCccccccccchhhH-HHhhccCCEEEEeCCChHHHHHHHHHHHhcCCeEEEe
Q 005071 442 VVMAIPMPGHPVPCQEEDSVLDDCRRL-TDLILSHDVIFLLTDTRESRWLPTLLCANTNKITITA 505 (715)
Q Consensus 442 ~~~~Ipmpgh~~~~~~~~~~~~~~~~l-~~li~~~DvV~~~tDs~esR~li~~~~~~~~kp~I~a 505 (715)
+..+ -.+.+-+ ++=++++|+++.+|++-+.-.+...+|+++|.+-+-+
T Consensus 283 i~GD----------------~td~~~L~ee~i~~~D~~ia~T~~De~Ni~~~llAk~~gv~kvIa 331 (461)
T 4g65_A 283 FCGD----------------AADQELLTEENIDQVDVFIALTNEDETNIMSAMLAKRMGAKKVMV 331 (461)
T ss_dssp EESC----------------TTCHHHHHHTTGGGCSEEEECCSCHHHHHHHHHHHHHTTCSEEEE
T ss_pred Eecc----------------ccchhhHhhcCchhhcEEEEcccCcHHHHHHHHHHHHcCCccccc
Confidence 2211 1233444 3347899999999999999999999999999874433
No 216
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=94.05 E-value=0.45 Score=48.74 Aligned_cols=96 Identities=7% Similarity=0.099 Sum_probs=59.7
Q ss_pred cCeEEEEcC-ChHHHHHHHHHHHhcCCeEEEEeCCcccccCCCcCCCCCcchhcCCCC-cHHHHHHHHHHhhCCCcEEEE
Q 005071 364 SRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGD-FKAMAAVKSLERIFPAVAAEG 441 (715)
Q Consensus 364 ~~kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~-~KAeaaa~~L~~inP~v~v~~ 441 (715)
.++|+|+|+ |.+|..+++.|+..| .++++++.+.- +- .. .|++.+. .+. .+.+++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~R~~~--------------~~---~~~~~~~~l~-~~~--~~~v~~-- 60 (321)
T 3c1o_A 4 MEKIIIYGGTGYIGKFMVRASLSFS-HPTFIYARPLT--------------PD---STPSSVQLRE-EFR--SMGVTI-- 60 (321)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHTT-CCEEEEECCCC--------------TT---CCHHHHHHHH-HHH--HTTCEE--
T ss_pred ccEEEEEcCCchhHHHHHHHHHhCC-CcEEEEECCcc--------------cc---cChHHHHHHH-Hhh--cCCcEE--
Confidence 357999996 999999999999999 46777765310 00 11 1332221 122 234443
Q ss_pred EecccCCCCCCCCCccccccccchhhHHHhhccCCEEEEeCCCh---HHHHHHHHHHHhcC
Q 005071 442 VVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTR---ESRWLPTLLCANTN 499 (715)
Q Consensus 442 ~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~---esR~li~~~~~~~~ 499 (715)
+..++ .+.+.+.++++++|+||.+.... ..+.++ ++|.+.+
T Consensus 61 v~~D~----------------~d~~~l~~a~~~~d~vi~~a~~~~~~~~~~l~-~aa~~~g 104 (321)
T 3c1o_A 61 IEGEM----------------EEHEKMVSVLKQVDIVISALPFPMISSQIHII-NAIKAAG 104 (321)
T ss_dssp EECCT----------------TCHHHHHHHHTTCSEEEECCCGGGSGGGHHHH-HHHHHHC
T ss_pred EEecC----------------CCHHHHHHHHcCCCEEEECCCccchhhHHHHH-HHHHHhC
Confidence 33332 35677888999999999998743 234444 4555555
No 217
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=94.02 E-value=0.085 Score=53.87 Aligned_cols=35 Identities=29% Similarity=0.361 Sum_probs=29.2
Q ss_pred hhccCeEEEEcC-ChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 361 kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
.|++++|+|.|+ ||+|..+|+.|++.|. ++.++|.
T Consensus 23 ~l~gk~~lVTGas~gIG~aia~~la~~G~-~V~~~~r 58 (271)
T 4ibo_A 23 DLGGRTALVTGSSRGLGRAMAEGLAVAGA-RILINGT 58 (271)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEECCS
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence 477889999985 7999999999999996 5666554
No 218
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=94.02 E-value=0.3 Score=50.14 Aligned_cols=91 Identities=14% Similarity=0.188 Sum_probs=57.6
Q ss_pred CeEEEEcC-ChHHHHHHHHHHHhcCCeEEEEeCCcccccCCCcCCCCCcchhcCCCCcHHHHHHHHHHhhCCCcEEEEEe
Q 005071 365 RKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEGVV 443 (715)
Q Consensus 365 ~kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~~KAeaaa~~L~~inP~v~v~~~~ 443 (715)
++|+|+|+ |.+|..+++.|+..| .+++.++.+. ..|+..+ +.+.. +++++ +.
T Consensus 12 ~~ilVtGatG~iG~~l~~~L~~~g-~~V~~l~R~~---------------------~~~~~~~-~~l~~--~~v~~--v~ 64 (318)
T 2r6j_A 12 SKILIFGGTGYIGNHMVKGSLKLG-HPTYVFTRPN---------------------SSKTTLL-DEFQS--LGAII--VK 64 (318)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHTT-CCEEEEECTT---------------------CSCHHHH-HHHHH--TTCEE--EE
T ss_pred CeEEEECCCchHHHHHHHHHHHCC-CcEEEEECCC---------------------CchhhHH-HHhhc--CCCEE--EE
Confidence 58999996 999999999999999 4666665421 0122111 11222 34444 33
Q ss_pred cccCCCCCCCCCccccccccchhhHHHhhccCCEEEEeCCChH---HHHHHHHHHHhcC
Q 005071 444 MAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTRE---SRWLPTLLCANTN 499 (715)
Q Consensus 444 ~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~e---sR~li~~~~~~~~ 499 (715)
.++ .+.+.+.+.++++|+||.++.... .+.++ ++|.+.+
T Consensus 65 ~Dl----------------~d~~~l~~a~~~~d~vi~~a~~~~~~~~~~l~-~aa~~~g 106 (318)
T 2r6j_A 65 GEL----------------DEHEKLVELMKKVDVVISALAFPQILDQFKIL-EAIKVAG 106 (318)
T ss_dssp CCT----------------TCHHHHHHHHTTCSEEEECCCGGGSTTHHHHH-HHHHHHC
T ss_pred ecC----------------CCHHHHHHHHcCCCEEEECCchhhhHHHHHHH-HHHHhcC
Confidence 333 356778889999999999987432 34444 4555555
No 219
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=94.01 E-value=0.046 Score=55.06 Aligned_cols=31 Identities=26% Similarity=0.418 Sum_probs=27.5
Q ss_pred eEEEEcCChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 366 KCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 366 kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
||.|||+|.+|+.+|..|++.|..+++++|.
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r 32 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVKQGGYRIYIANR 32 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCSCEEEEECS
T ss_pred EEEEECchHHHHHHHHHHHHCCCCeEEEECC
Confidence 7999999999999999999999656777765
No 220
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=94.00 E-value=0.13 Score=52.47 Aligned_cols=36 Identities=17% Similarity=0.240 Sum_probs=29.2
Q ss_pred HhhccCeEEEEc-CChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 360 DILSSRKCLLLG-AGTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 360 ~kL~~~kVlIvG-aGgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
..+++++|+|.| .||+|..+|+.|++.|. ++.+++.
T Consensus 40 ~~l~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r 76 (285)
T 2c07_A 40 YCGENKVALVTGAGRGIGREIAKMLAKSVS-HVICISR 76 (285)
T ss_dssp CCCSSCEEEEESTTSHHHHHHHHHHTTTSS-EEEEEES
T ss_pred ccCCCCEEEEECCCcHHHHHHHHHHHHcCC-EEEEEcC
Confidence 356788999997 57999999999999995 5666654
No 221
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=94.00 E-value=0.17 Score=56.23 Aligned_cols=32 Identities=13% Similarity=0.275 Sum_probs=28.3
Q ss_pred cCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 364 SRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 364 ~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
..+|.|||+|..|+.+|++|++.|. +++++|.
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~~G~-~V~v~dr 36 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVESRGY-TVAIYNR 36 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHHTTC-CEEEECS
T ss_pred CCcEEEEeeHHHHHHHHHHHHhCCC-EEEEEcC
Confidence 3589999999999999999999997 5778775
No 222
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=93.97 E-value=0.14 Score=52.22 Aligned_cols=34 Identities=24% Similarity=0.417 Sum_probs=29.0
Q ss_pred hccCeEEEEcC-ChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 362 LSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 362 L~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
+++++|+|.|+ ||+|..+|+.|++.|. +++++|.
T Consensus 27 l~~k~vlVTGas~gIG~aia~~L~~~G~-~V~~~~r 61 (276)
T 2b4q_A 27 LAGRIALVTGGSRGIGQMIAQGLLEAGA-RVFICAR 61 (276)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECS
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeC
Confidence 56789999985 7999999999999996 5777765
No 223
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=93.95 E-value=0.12 Score=54.12 Aligned_cols=31 Identities=32% Similarity=0.622 Sum_probs=25.9
Q ss_pred ccCeEEEEcCChHHHHHHHHHHHhcCCeEEEE
Q 005071 363 SSRKCLLLGAGTLGCQVARMLMAWGVRKITLL 394 (715)
Q Consensus 363 ~~~kVlIvGaGgLGs~VA~~La~~GVg~ItLV 394 (715)
...||+|||+|.+|+.+|..|++.|. .++++
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~~G~-~V~l~ 48 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLARAGH-EVILI 48 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHHTTC-EEEEE
T ss_pred cCCcEEEECcCHHHHHHHHHHHHCCC-eEEEE
Confidence 45689999999999999999999995 56665
No 224
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=93.94 E-value=0.21 Score=49.33 Aligned_cols=32 Identities=31% Similarity=0.449 Sum_probs=27.3
Q ss_pred cCeEEEEcC-ChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 364 SRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 364 ~~kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
+++|+|.|+ ||+|..+++.|++.|. +++++|.
T Consensus 2 ~k~vlItGasggiG~~~a~~l~~~G~-~V~~~~r 34 (250)
T 2cfc_A 2 SRVAIVTGASSGNGLAIATRFLARGD-RVAALDL 34 (250)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeC
Confidence 467899975 8999999999999995 6888775
No 225
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=93.93 E-value=0.23 Score=50.04 Aligned_cols=35 Identities=34% Similarity=0.562 Sum_probs=29.3
Q ss_pred hhccCeEEEEc-CChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 361 ILSSRKCLLLG-AGTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 361 kL~~~kVlIvG-aGgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
.+++++|+|.| .||+|..+|+.|++.|. ++.++|.
T Consensus 4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r 39 (262)
T 1zem_A 4 KFNGKVCLVTGAGGNIGLATALRLAEEGT-AIALLDM 39 (262)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence 46788999997 57999999999999996 5777764
No 226
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=93.93 E-value=0.15 Score=51.45 Aligned_cols=34 Identities=32% Similarity=0.282 Sum_probs=26.1
Q ss_pred HhhccCeEEEEcC-ChHHHHHHHHHHHhcCCeEEE
Q 005071 360 DILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITL 393 (715)
Q Consensus 360 ~kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItL 393 (715)
..+.+++|+|.|+ ||+|..+|+.|++.|..-+.+
T Consensus 22 ~~l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~ 56 (267)
T 4iiu_A 22 SNAMSRSVLVTGASKGIGRAIARQLAADGFNIGVH 56 (267)
T ss_dssp ---CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred cccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEE
Confidence 3567888999975 899999999999999764443
No 227
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=93.92 E-value=0.16 Score=53.70 Aligned_cols=37 Identities=22% Similarity=0.439 Sum_probs=31.6
Q ss_pred hhccCeEEEEcCChHHHHHHHHHHHhcC-CeEEEEeCC
Q 005071 361 ILSSRKCLLLGAGTLGCQVARMLMAWGV-RKITLLDNG 397 (715)
Q Consensus 361 kL~~~kVlIvGaGgLGs~VA~~La~~GV-g~ItLVD~D 397 (715)
+.+..||.|+|+|.+|..+|..|+..|. .+|.|+|-+
T Consensus 3 ~m~~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~ 40 (317)
T 3d0o_A 3 KFKGNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLD 40 (317)
T ss_dssp -CCCCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 3456799999999999999999999886 789999863
No 228
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=93.90 E-value=0.12 Score=51.95 Aligned_cols=36 Identities=31% Similarity=0.465 Sum_probs=30.0
Q ss_pred hhccCeEEEEc-CChHHHHHHHHHHHhcCCeEEEEeCC
Q 005071 361 ILSSRKCLLLG-AGTLGCQVARMLMAWGVRKITLLDNG 397 (715)
Q Consensus 361 kL~~~kVlIvG-aGgLGs~VA~~La~~GVg~ItLVD~D 397 (715)
.+++++|+|.| .||+|..+|+.|++.|. +++++|.+
T Consensus 9 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~ 45 (263)
T 3ak4_A 9 DLSGRKAIVTGGSKGIGAAIARALDKAGA-TVAIADLD 45 (263)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCC
Confidence 36788999997 57999999999999996 67777653
No 229
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=93.89 E-value=0.25 Score=50.06 Aligned_cols=36 Identities=25% Similarity=0.304 Sum_probs=30.4
Q ss_pred HhhccCeEEEEc-CChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 360 DILSSRKCLLLG-AGTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 360 ~kL~~~kVlIvG-aGgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
..+++++|+|.| .||+|..+|+.|++.|. +++++|.
T Consensus 17 ~~l~~k~~lVTGas~gIG~~ia~~l~~~G~-~V~~~~r 53 (267)
T 1vl8_A 17 FDLRGRVALVTGGSRGLGFGIAQGLAEAGC-SVVVASR 53 (267)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeC
Confidence 457788999997 57999999999999996 5777765
No 230
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=93.88 E-value=0.26 Score=50.36 Aligned_cols=91 Identities=13% Similarity=0.067 Sum_probs=54.9
Q ss_pred hhccCeEEEEcC-ChHHHHHHHHHHHhcCCeEEEEeCCcccccCCCcCCCCCcchhcCCCCcHHHHHHHHHHhhCCCcEE
Q 005071 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAA 439 (715)
Q Consensus 361 kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~~KAeaaa~~L~~inP~v~v 439 (715)
.+++++|+|.|+ ||+|..+|+.|++.|. ++.++|.. ...+.+.+++.+....+ ++
T Consensus 26 ~~~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~---------------------~~~~~~~~~~~~~~~~~--~~ 81 (280)
T 4da9_A 26 QKARPVAIVTGGRRGIGLGIARALAASGF-DIAITGIG---------------------DAEGVAPVIAELSGLGA--RV 81 (280)
T ss_dssp CCCCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESC---------------------CHHHHHHHHHHHHHTTC--CE
T ss_pred ccCCCEEEEecCCCHHHHHHHHHHHHCCC-eEEEEeCC---------------------CHHHHHHHHHHHHhcCC--cE
Confidence 467889999985 7999999999999996 56776631 12245556666666543 45
Q ss_pred EEEecccCCCCCCCCCccccccccchhhHHHhhccCCEEEEeCCC
Q 005071 440 EGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDT 484 (715)
Q Consensus 440 ~~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs 484 (715)
..+..++ ++ .+....-.+.+.+.+...|+||.+..-
T Consensus 82 ~~~~~Dv-------~d--~~~v~~~~~~~~~~~g~iD~lvnnAg~ 117 (280)
T 4da9_A 82 IFLRADL-------AD--LSSHQATVDAVVAEFGRIDCLVNNAGI 117 (280)
T ss_dssp EEEECCT-------TS--GGGHHHHHHHHHHHHSCCCEEEEECC-
T ss_pred EEEEecC-------CC--HHHHHHHHHHHHHHcCCCCEEEECCCc
Confidence 5555544 10 111111122222233478999987753
No 231
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=93.85 E-value=0.21 Score=49.91 Aligned_cols=35 Identities=26% Similarity=0.451 Sum_probs=29.8
Q ss_pred hhccCeEEEEcC-ChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 361 kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
.+++++|+|.|+ ||+|..+|+.|++.|. ++.++|.
T Consensus 6 ~l~~k~vlITGas~gIG~~~a~~l~~~G~-~V~~~~r 41 (261)
T 3n74_A 6 SLEGKVALITGAGSGFGEGMAKRFAKGGA-KVVIVDR 41 (261)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred cCCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcC
Confidence 367889999985 6899999999999996 5888775
No 232
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=93.85 E-value=0.14 Score=53.97 Aligned_cols=32 Identities=31% Similarity=0.505 Sum_probs=28.7
Q ss_pred eEEEEcCChHHHHHHHHHHHhcC-CeEEEEeCC
Q 005071 366 KCLLLGAGTLGCQVARMLMAWGV-RKITLLDNG 397 (715)
Q Consensus 366 kVlIvGaGgLGs~VA~~La~~GV-g~ItLVD~D 397 (715)
||.|||+|.+|+.+|..|+..|. ++++++|.+
T Consensus 2 kI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~ 34 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMKGFAREMVLIDVD 34 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCC
Confidence 79999999999999999999994 579998863
No 233
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=93.84 E-value=0.13 Score=52.78 Aligned_cols=36 Identities=22% Similarity=0.278 Sum_probs=27.1
Q ss_pred HhhccCeEEEEcC-ChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 360 DILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 360 ~kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
..+++++|+|.|+ ||+|..+|+.|++.|. ++.++|.
T Consensus 29 ~~l~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r 65 (281)
T 4dry_A 29 GSGEGRIALVTGGGTGVGRGIAQALSAEGY-SVVITGR 65 (281)
T ss_dssp -----CEEEETTTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEEC
Confidence 4578899999985 7999999999999996 5777765
No 234
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=93.84 E-value=0.052 Score=57.07 Aligned_cols=36 Identities=28% Similarity=0.413 Sum_probs=30.6
Q ss_pred hhccCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeCC
Q 005071 361 ILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNG 397 (715)
Q Consensus 361 kL~~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~D 397 (715)
+....||.|||+|.+|+.+|+.|++.|. +++++|.+
T Consensus 28 ~~~~~~I~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~ 63 (320)
T 4dll_A 28 DPYARKITFLGTGSMGLPMARRLCEAGY-ALQVWNRT 63 (320)
T ss_dssp -CCCSEEEEECCTTTHHHHHHHHHHTTC-EEEEECSC
T ss_pred ccCCCEEEEECccHHHHHHHHHHHhCCC-eEEEEcCC
Confidence 4456799999999999999999999996 68888764
No 235
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=93.82 E-value=0.26 Score=55.02 Aligned_cols=32 Identities=13% Similarity=0.251 Sum_probs=28.7
Q ss_pred CeEEEEcCChHHHHHHHHHHHhcCCeEEEEeCC
Q 005071 365 RKCLLLGAGTLGCQVARMLMAWGVRKITLLDNG 397 (715)
Q Consensus 365 ~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~D 397 (715)
.+|.|||+|..|+.+|.+|++.|. +++++|.+
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~-~V~v~dr~ 34 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGF-VVCAFNRT 34 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTC-CEEEECSS
T ss_pred CeEEEEChHHHHHHHHHHHHHCCC-eEEEEeCC
Confidence 479999999999999999999997 58888864
No 236
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=93.79 E-value=0.11 Score=53.23 Aligned_cols=86 Identities=13% Similarity=0.166 Sum_probs=56.6
Q ss_pred CeEEEEcC-ChHHHHHHHHHHHhcCCeEEEEeCCcccccCCCcCCCCCcchhcCCCCcHHHHHHHHHHhhCCCcEEEEEe
Q 005071 365 RKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEGVV 443 (715)
Q Consensus 365 ~kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~~KAeaaa~~L~~inP~v~v~~~~ 443 (715)
.||.|||+ |.+|+.+|+.|.+.|. +++++|.+ ..|++.+++ . ++.+
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~-~V~~~~r~----------------------~~~~~~~~~----~--g~~~---- 58 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAH-HLAAIEIA----------------------PEGRDRLQG----M--GIPL---- 58 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSS-EEEEECCS----------------------HHHHHHHHH----T--TCCC----
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCC-EEEEEECC----------------------HHHHHHHHh----c--CCCc----
Confidence 48999999 9999999999999995 67777642 112333222 1 1111
Q ss_pred cccCCCCCCCCCccccccccchhhHHHhhccCCEEEEeCCChHHHHHHHHHHHh--cCCeEEEe
Q 005071 444 MAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTRESRWLPTLLCAN--TNKITITA 505 (715)
Q Consensus 444 ~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~esR~li~~~~~~--~~kp~I~a 505 (715)
. ...+.++++|+||.|+-....+.++..+... .+..+|+.
T Consensus 59 --------------------~--~~~~~~~~aDvVi~av~~~~~~~v~~~l~~~l~~~~ivv~~ 100 (286)
T 3c24_A 59 --------------------T--DGDGWIDEADVVVLALPDNIIEKVAEDIVPRVRPGTIVLIL 100 (286)
T ss_dssp --------------------C--CSSGGGGTCSEEEECSCHHHHHHHHHHHGGGSCTTCEEEES
T ss_pred --------------------C--CHHHHhcCCCEEEEcCCchHHHHHHHHHHHhCCCCCEEEEC
Confidence 0 1124567899999999877767666665432 35667764
No 237
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=93.78 E-value=0.25 Score=55.14 Aligned_cols=31 Identities=19% Similarity=0.426 Sum_probs=28.1
Q ss_pred eEEEEcCChHHHHHHHHHHHhcCCeEEEEeCC
Q 005071 366 KCLLLGAGTLGCQVARMLMAWGVRKITLLDNG 397 (715)
Q Consensus 366 kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~D 397 (715)
||.|||+|..|+.+|.+|++.|. +++++|.+
T Consensus 3 kIgVIG~G~mG~~lA~~La~~G~-~V~v~dr~ 33 (478)
T 1pgj_A 3 DVGVVGLGVMGANLALNIAEKGF-KVAVFNRT 33 (478)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTC-CEEEECSS
T ss_pred EEEEEChHHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 79999999999999999999997 58888864
No 238
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=93.77 E-value=0.19 Score=50.47 Aligned_cols=94 Identities=14% Similarity=0.081 Sum_probs=58.0
Q ss_pred CeEEEEcC-ChHHHHHHHHHHHh--cCCeEEEEeCCcccccCCCcCCCCCcchhcCCCCcHHHHHHHHHHhhCCCcEEEE
Q 005071 365 RKCLLLGA-GTLGCQVARMLMAW--GVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEG 441 (715)
Q Consensus 365 ~kVlIvGa-GgLGs~VA~~La~~--GVg~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~~KAeaaa~~L~~inP~v~v~~ 441 (715)
++|+|.|+ |.+|+.+++.|+.. | -+++.++.+. + |+.. +.. +.++ .
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g-~~V~~~~r~~--------------~--------~~~~----l~~--~~~~--~ 49 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPA-SQIIAIVRNV--------------E--------KAST----LAD--QGVE--V 49 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCG-GGEEEEESCT--------------T--------TTHH----HHH--TTCE--E
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCC-CeEEEEEcCH--------------H--------HHhH----Hhh--cCCe--E
Confidence 47999997 99999999999998 7 4677766521 0 1111 111 2333 3
Q ss_pred EecccCCCCCCCCCccccccccchhhHHHhhccCCEEEEeCCC-------hHHHHHHHHHHHhcCC-eEEEe
Q 005071 442 VVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDT-------RESRWLPTLLCANTNK-ITITA 505 (715)
Q Consensus 442 ~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs-------~esR~li~~~~~~~~k-p~I~a 505 (715)
+..++ .+.+.+.++++++|+||.+... ...-..+-++|.+.+. .+|..
T Consensus 50 ~~~D~----------------~d~~~l~~~~~~~d~vi~~a~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~ 105 (287)
T 2jl1_A 50 RHGDY----------------NQPESLQKAFAGVSKLLFISGPHYDNTLLIVQHANVVKAARDAGVKHIAYT 105 (287)
T ss_dssp EECCT----------------TCHHHHHHHTTTCSEEEECCCCCSCHHHHHHHHHHHHHHHHHTTCSEEEEE
T ss_pred EEecc----------------CCHHHHHHHHhcCCEEEEcCCCCcCchHHHHHHHHHHHHHHHcCCCEEEEE
Confidence 33333 3556778888999999988752 2222334455666664 56654
No 239
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=93.74 E-value=0.43 Score=47.98 Aligned_cols=32 Identities=22% Similarity=0.231 Sum_probs=27.2
Q ss_pred cCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 364 SRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 364 ~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
..||+|.|+|.+|+.+++.|...|. +++.++.
T Consensus 5 ~~~ilVtGaG~iG~~l~~~L~~~g~-~V~~~~r 36 (286)
T 3ius_A 5 TGTLLSFGHGYTARVLSRALAPQGW-RIIGTSR 36 (286)
T ss_dssp CCEEEEETCCHHHHHHHHHHGGGTC-EEEEEES
T ss_pred cCcEEEECCcHHHHHHHHHHHHCCC-EEEEEEc
Confidence 3689999999999999999999995 5666654
No 240
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=93.72 E-value=0.14 Score=54.34 Aligned_cols=30 Identities=20% Similarity=0.379 Sum_probs=26.8
Q ss_pred eEEEEcCChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 366 KCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 366 kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
||.|||+|.+|+.+|..|++.|. +++++|.
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~-~V~~~~r 46 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCR-EVCVWHM 46 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEE-EEEEECS
T ss_pred eEEEECCCHHHHHHHHHHHhCCC-EEEEEEC
Confidence 79999999999999999999984 6777765
No 241
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=93.68 E-value=0.23 Score=49.71 Aligned_cols=34 Identities=26% Similarity=0.427 Sum_probs=28.6
Q ss_pred hccCeEEEEcC-ChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 362 LSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 362 L~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
+++++|+|.|+ ||+|..+|+.|++.|. ++.++|.
T Consensus 2 l~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r 36 (255)
T 2q2v_A 2 LKGKTALVTGSTSGIGLGIAQVLARAGA-NIVLNGF 36 (255)
T ss_dssp CTTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEECS
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence 46788999986 8999999999999996 5777654
No 242
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=93.68 E-value=0.13 Score=50.89 Aligned_cols=35 Identities=17% Similarity=0.337 Sum_probs=29.6
Q ss_pred hhccCeEEEEc-CChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 361 ILSSRKCLLLG-AGTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 361 kL~~~kVlIvG-aGgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
.+++++|+|.| .||+|..+++.|+..|. +++++|.
T Consensus 3 ~~~~k~vlVtGasggiG~~~a~~l~~~G~-~V~~~~r 38 (251)
T 1zk4_A 3 RLDGKVAIITGGTLGIGLAIATKFVEEGA-KVMITGR 38 (251)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCcEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeC
Confidence 46788999997 58999999999999996 5777765
No 243
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=93.67 E-value=0.071 Score=57.75 Aligned_cols=36 Identities=22% Similarity=0.490 Sum_probs=31.0
Q ss_pred HhhccCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 360 DILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 360 ~kL~~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
..|.+++|.|||+|.+|..+|+.|.+.|. ++..+|.
T Consensus 172 ~~l~gktvGIIGlG~IG~~vA~~l~~fG~-~V~~~d~ 207 (365)
T 4hy3_A 172 RLIAGSEIGIVGFGDLGKALRRVLSGFRA-RIRVFDP 207 (365)
T ss_dssp CCSSSSEEEEECCSHHHHHHHHHHTTSCC-EEEEECS
T ss_pred cccCCCEEEEecCCcccHHHHHhhhhCCC-EEEEECC
Confidence 46889999999999999999999998886 5666554
No 244
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=93.64 E-value=0.6 Score=48.85 Aligned_cols=36 Identities=28% Similarity=0.354 Sum_probs=29.4
Q ss_pred hhccCeEEEEc-CChHHHHHHHHHHH--hcCCeEEEEeCC
Q 005071 361 ILSSRKCLLLG-AGTLGCQVARMLMA--WGVRKITLLDNG 397 (715)
Q Consensus 361 kL~~~kVlIvG-aGgLGs~VA~~La~--~GVg~ItLVD~D 397 (715)
.+++++|||.| .|++|..+++.|+. .|. +++++|..
T Consensus 7 ~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~-~V~~~~r~ 45 (362)
T 3sxp_A 7 ELENQTILITGGAGFVGSNLAFHFQENHPKA-KVVVLDKF 45 (362)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHHCTTS-EEEEEECC
T ss_pred hcCCCEEEEECCCCHHHHHHHHHHHhhCCCC-eEEEEECC
Confidence 35678999996 59999999999999 774 67777763
No 245
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=93.64 E-value=0.2 Score=50.36 Aligned_cols=35 Identities=17% Similarity=0.365 Sum_probs=28.9
Q ss_pred hhccCeEEEEc-CChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 361 ILSSRKCLLLG-AGTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 361 kL~~~kVlIvG-aGgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
.+++++|+|.| .||+|..+|+.|++.|. ++.++|.
T Consensus 2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r 37 (260)
T 2qq5_A 2 PMNGQVCVVTGASRGIGRGIALQLCKAGA-TVYITGR 37 (260)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeC
Confidence 35678888887 57999999999999995 6777765
No 246
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=93.63 E-value=0.16 Score=50.97 Aligned_cols=36 Identities=39% Similarity=0.461 Sum_probs=29.9
Q ss_pred hhccCeEEEEcC-ChHHHHHHHHHHHhcCCeEEEEeCC
Q 005071 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNG 397 (715)
Q Consensus 361 kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD~D 397 (715)
.+++++|+|.|+ ||+|..+|+.|++.|. ++.++|.+
T Consensus 4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r~ 40 (257)
T 3tpc_A 4 QLKSRVFIVTGASSGLGAAVTRMLAQEGA-TVLGLDLK 40 (257)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 367889999985 7999999999999996 47777753
No 247
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=93.61 E-value=0.28 Score=49.51 Aligned_cols=35 Identities=29% Similarity=0.409 Sum_probs=29.4
Q ss_pred hhccCeEEEEc-CChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 361 ILSSRKCLLLG-AGTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 361 kL~~~kVlIvG-aGgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
.+++++|+|.| .||+|..+|+.|++.|. +++++|.
T Consensus 4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r 39 (260)
T 1nff_A 4 RLTGKVALVSGGARGMGASHVRAMVAEGA-KVVFGDI 39 (260)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeC
Confidence 36788999998 57999999999999996 5777765
No 248
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=93.60 E-value=0.33 Score=49.62 Aligned_cols=33 Identities=27% Similarity=0.271 Sum_probs=28.0
Q ss_pred cCeEEEEc-CChHHHHHHHHHHHhcCCeEEEEeCC
Q 005071 364 SRKCLLLG-AGTLGCQVARMLMAWGVRKITLLDNG 397 (715)
Q Consensus 364 ~~kVlIvG-aGgLGs~VA~~La~~GVg~ItLVD~D 397 (715)
.++|+|.| .|.+|+.+++.|+..|. +++.++..
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~ 35 (311)
T 3m2p_A 2 SLKIAVTGGTGFLGQYVVESIKNDGN-TPIILTRS 35 (311)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCC-EEEEEeCC
Confidence 36899999 59999999999999995 67777764
No 249
>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}
Probab=93.60 E-value=0.56 Score=51.75 Aligned_cols=37 Identities=30% Similarity=0.283 Sum_probs=29.8
Q ss_pred hhccCeEEEEcC-ChHHHHHHHHHHHhc-C-CeEEEEeCC
Q 005071 361 ILSSRKCLLLGA-GTLGCQVARMLMAWG-V-RKITLLDNG 397 (715)
Q Consensus 361 kL~~~kVlIvGa-GgLGs~VA~~La~~G-V-g~ItLVD~D 397 (715)
..+.++|+|.|+ |+||+++++.|++.+ + .++++++..
T Consensus 70 ~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~ 109 (478)
T 4dqv_A 70 SPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRA 109 (478)
T ss_dssp CSCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECS
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECC
Confidence 356789999995 899999999999983 1 578877763
No 250
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=93.57 E-value=0.1 Score=55.92 Aligned_cols=108 Identities=12% Similarity=0.186 Sum_probs=63.0
Q ss_pred CeEEEEcCChHHHHHHHHHHHhcC------CeEEEEeCCcccccCCCcCCCCCcchhcCCCCcHHHHHHHHHHh--hCCC
Q 005071 365 RKCLLLGAGTLGCQVARMLMAWGV------RKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLER--IFPA 436 (715)
Q Consensus 365 ~kVlIvGaGgLGs~VA~~La~~GV------g~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~~KAeaaa~~L~~--inP~ 436 (715)
.||.|||+|..|+.+|..|++.|. .+++++|.+.- .. ++.|++.+.+.-.. ..|+
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~--------------~~---~~~~~~~l~~~~~~~~~~~~ 84 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEF--------------VN---GERMVDIINNKHENTKYLKG 84 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC--------------------CCHHHHHHHHCBCTTTSTT
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChh--------------hh---hHHHHHHHHhcCcccccCCc
Confidence 379999999999999999999993 47888886421 01 34455554432100 0122
Q ss_pred cEEEEEecccCCCCCCCCCccccccccchhhHHHhhccCCEEEEeCCChHHHHHHHHHHH----h--cCCeEEEeeeC
Q 005071 437 VAAEGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTRESRWLPTLLCA----N--TNKITITAALG 508 (715)
Q Consensus 437 v~v~~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~esR~li~~~~~----~--~~kp~I~aalG 508 (715)
..+ .. ... ...+..+.++++|+||.|+=+...+..+..+.. . .+.++|+..-|
T Consensus 85 ~~~--------------~~----~i~-~~~~~~ea~~~aDvVilav~~~~~~~vl~~i~~~~~~~l~~~~ivvs~~~G 143 (375)
T 1yj8_A 85 VPL--------------PH----NIV-AHSDLASVINDADLLIFIVPCQYLESVLASIKESESIKIASHAKAISLTKG 143 (375)
T ss_dssp CBC--------------CT----TEE-EESSTHHHHTTCSEEEECCCHHHHHHHHHHHTC---CCCCTTCEEEECCCS
T ss_pred ccC--------------cC----CeE-EECCHHHHHcCCCEEEEcCCHHHHHHHHHHHhhhhhccCCCCCEEEEeCCc
Confidence 110 00 000 112234556889999999987666666665532 1 25567765434
No 251
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=93.57 E-value=0.27 Score=50.31 Aligned_cols=35 Identities=23% Similarity=0.441 Sum_probs=29.9
Q ss_pred hhccCeEEEEc-CChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 361 ILSSRKCLLLG-AGTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 361 kL~~~kVlIvG-aGgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
.+++++|+|.| .||+|..+|+.|++.|. ++.++|.
T Consensus 24 ~l~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r 59 (277)
T 4dqx_A 24 DLNQRVCIVTGGGSGIGRATAELFAKNGA-YVVVADV 59 (277)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence 46788999997 57999999999999997 6777765
No 252
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=93.56 E-value=0.18 Score=49.69 Aligned_cols=34 Identities=26% Similarity=0.460 Sum_probs=29.5
Q ss_pred hccCeEEEEcC-ChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 362 LSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 362 L~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
+++++|+|.|+ |++|..+++.|++.|. ++.++|.
T Consensus 5 l~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r 39 (244)
T 3d3w_A 5 LAGRRVLVTGAGKGIGRGTVQALHATGA-RVVAVSR 39 (244)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred cCCcEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence 57889999987 8999999999999996 5777765
No 253
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=93.56 E-value=0.13 Score=51.56 Aligned_cols=35 Identities=26% Similarity=0.483 Sum_probs=29.4
Q ss_pred hhccCeEEEEcC-ChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 361 kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
++++++|+|.|+ ||+|..+|+.|++.|. ++.++|.
T Consensus 3 ~l~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r 38 (253)
T 1hxh_A 3 RLQGKVALVTGGASGVGLEVVKLLLGEGA-KVAFSDI 38 (253)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECS
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence 467889999985 8999999999999996 5777664
No 254
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=93.55 E-value=0.074 Score=56.38 Aligned_cols=34 Identities=24% Similarity=0.459 Sum_probs=28.9
Q ss_pred ccCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeCC
Q 005071 363 SSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNG 397 (715)
Q Consensus 363 ~~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~D 397 (715)
+-+||.|||+|..|+.+|..|++.|. +++++|.+
T Consensus 5 ~~~kI~vIGaG~MG~~iA~~la~~G~-~V~l~d~~ 38 (319)
T 2dpo_A 5 AAGDVLIVGSGLVGRSWAMLFASGGF-RVKLYDIE 38 (319)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTC-CEEEECSC
T ss_pred CCceEEEEeeCHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 34689999999999999999999997 68887763
No 255
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=93.53 E-value=0.22 Score=53.58 Aligned_cols=119 Identities=17% Similarity=0.129 Sum_probs=67.4
Q ss_pred hccCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeCCcccccCCCcCCCCCcchhcCCCCcHHHHHHHHHHhh-CCCcEEE
Q 005071 362 LSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERI-FPAVAAE 440 (715)
Q Consensus 362 L~~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~~KAeaaa~~L~~i-nP~v~v~ 440 (715)
++..||.|||+|.+|..+|++|++.| -+++++|.+.-....+... |-.-+...++.+... .|++-+.
T Consensus 20 m~~mkIgiIGlG~mG~~~A~~L~~~G-~~V~v~dr~~~~~~~l~~~-----------g~~~~~s~~e~~~~a~~~DvVi~ 87 (358)
T 4e21_A 20 FQSMQIGMIGLGRMGADMVRRLRKGG-HECVVYDLNVNAVQALERE-----------GIAGARSIEEFCAKLVKPRVVWL 87 (358)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTT-CEEEEECSCHHHHHHHHTT-----------TCBCCSSHHHHHHHSCSSCEEEE
T ss_pred hcCCEEEEECchHHHHHHHHHHHhCC-CEEEEEeCCHHHHHHHHHC-----------CCEEeCCHHHHHhcCCCCCEEEE
Confidence 45679999999999999999999999 4788888764322222111 111111122222221 2455444
Q ss_pred EEecccCCCCCCCCCccccccccchhhHHHhhccCCEEEEeCCChH-HHHHHHHHHHhcCCeEEEee
Q 005071 441 GVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTRE-SRWLPTLLCANTNKITITAA 506 (715)
Q Consensus 441 ~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~e-sR~li~~~~~~~~kp~I~aa 506 (715)
.++. + + .....+.+...++.-++||+++-... .-..+...+...++.++++.
T Consensus 88 ~vp~----~-~---------v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~vdap 140 (358)
T 4e21_A 88 MVPA----A-V---------VDSMLQRMTPLLAANDIVIDGGNSHYQDDIRRADQMRAQGITYVDVG 140 (358)
T ss_dssp CSCG----G-G---------HHHHHHHHGGGCCTTCEEEECSSCCHHHHHHHHHHHHTTTCEEEEEE
T ss_pred eCCH----H-H---------HHHHHHHHHhhCCCCCEEEeCCCCChHHHHHHHHHHHHCCCEEEeCC
Confidence 4331 1 0 11122334445567789999876543 22334556677888888763
No 256
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=93.52 E-value=0.39 Score=51.09 Aligned_cols=38 Identities=18% Similarity=0.214 Sum_probs=32.8
Q ss_pred HhhccCeEEEEcC-ChHHHHHHHHHHHhcCCeEEEEeCCc
Q 005071 360 DILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGR 398 (715)
Q Consensus 360 ~kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD~D~ 398 (715)
.+|++++|+|.|+ ||+|..+|+.|++.|. ++.++|.+.
T Consensus 41 ~~l~gk~vlVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~ 79 (346)
T 3kvo_A 41 GRLAGCTVFITGASRGIGKAIALKAAKDGA-NIVIAAKTA 79 (346)
T ss_dssp STTTTCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESCC
T ss_pred CCCCCCEEEEeCCChHHHHHHHHHHHHCCC-EEEEEECCh
Confidence 4688999999985 8999999999999996 688888753
No 257
>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2
Probab=93.51 E-value=0.19 Score=50.31 Aligned_cols=39 Identities=13% Similarity=0.092 Sum_probs=30.5
Q ss_pred HHhhccCeEEEEc-CChHHHHHHHHHHHhcC--CeEEEEeCC
Q 005071 359 LDILSSRKCLLLG-AGTLGCQVARMLMAWGV--RKITLLDNG 397 (715)
Q Consensus 359 q~kL~~~kVlIvG-aGgLGs~VA~~La~~GV--g~ItLVD~D 397 (715)
...+++++|+|.| .|++|..+|+.|++.|. .+++++|.+
T Consensus 16 ~~~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~ 57 (267)
T 1sny_A 16 PRGSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRN 57 (267)
T ss_dssp ----CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESC
T ss_pred ccCCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecC
Confidence 4567888999997 58999999999999995 688888764
No 258
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=93.50 E-value=0.078 Score=57.81 Aligned_cols=37 Identities=27% Similarity=0.310 Sum_probs=33.4
Q ss_pred HhhccCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeCC
Q 005071 360 DILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNG 397 (715)
Q Consensus 360 ~kL~~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~D 397 (715)
-.+...||+|+|+|.+|..+|+.|.+.|. +++++|..
T Consensus 180 ~~v~~~kV~ViG~G~iG~~aa~~a~~lGa-~V~v~D~~ 216 (381)
T 3p2y_A 180 GTVKPASALVLGVGVAGLQALATAKRLGA-KTTGYDVR 216 (381)
T ss_dssp CEECCCEEEEESCSHHHHHHHHHHHHHTC-EEEEECSS
T ss_pred CCcCCCEEEEECchHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 36789999999999999999999999998 69988864
No 259
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=93.49 E-value=0.19 Score=50.86 Aligned_cols=85 Identities=14% Similarity=0.096 Sum_probs=55.8
Q ss_pred hhccCeEEEEcC-ChHHHHHHHHHHHhcCCeEEEEeCCcccccCCCcCCCCCcchhcCCCCcHHHHHHHHHHhhCCCcEE
Q 005071 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAA 439 (715)
Q Consensus 361 kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~~KAeaaa~~L~~inP~v~v 439 (715)
.+++++|+|.|+ ||+|..+|+.|++.|. ++.++|... - ...+++.+++.+++. +.++
T Consensus 8 ~l~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~----------------~---~~~~~~~~~~~~~~~--~~~~ 65 (262)
T 3ksu_A 8 DLKNKVIVIAGGIKNLGALTAKTFALESV-NLVLHYHQA----------------K---DSDTANKLKDELEDQ--GAKV 65 (262)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHTTSSC-EEEEEESCG----------------G---GHHHHHHHHHHHHTT--TCEE
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecCc----------------c---CHHHHHHHHHHHHhc--CCcE
Confidence 467889999985 7999999999999996 466665411 0 223566666667665 3466
Q ss_pred EEEecccCCCCCCCCCccccccccchhhHHHhh-------ccCCEEEEeCC
Q 005071 440 EGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLI-------LSHDVIFLLTD 483 (715)
Q Consensus 440 ~~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li-------~~~DvV~~~tD 483 (715)
..+..++ .+.+.+..++ ...|++|.+..
T Consensus 66 ~~~~~Dv----------------~d~~~v~~~~~~~~~~~g~iD~lvnnAg 100 (262)
T 3ksu_A 66 ALYQSDL----------------SNEEEVAKLFDFAEKEFGKVDIAINTVG 100 (262)
T ss_dssp EEEECCC----------------CSHHHHHHHHHHHHHHHCSEEEEEECCC
T ss_pred EEEECCC----------------CCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 6666554 1233333333 36799998764
No 260
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=93.48 E-value=0.072 Score=57.34 Aligned_cols=35 Identities=23% Similarity=0.358 Sum_probs=31.0
Q ss_pred hhccCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 361 ILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 361 kL~~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
.|.+++|.|||+|.+|..+|+.|.+.|+. ++.+|.
T Consensus 161 ~l~gktvGIIG~G~IG~~vA~~l~~~G~~-V~~~dr 195 (351)
T 3jtm_A 161 DLEGKTIGTVGAGRIGKLLLQRLKPFGCN-LLYHDR 195 (351)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHGGGCCE-EEEECS
T ss_pred cccCCEEeEEEeCHHHHHHHHHHHHCCCE-EEEeCC
Confidence 58999999999999999999999999975 666664
No 261
>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}
Probab=93.46 E-value=0.23 Score=50.21 Aligned_cols=35 Identities=23% Similarity=0.373 Sum_probs=29.4
Q ss_pred hhccCeEEEEc-CChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 361 ILSSRKCLLLG-AGTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 361 kL~~~kVlIvG-aGgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
.+++++|+|.| .||+|..+|+.|+..|. +++++|.
T Consensus 31 ~l~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r 66 (279)
T 3ctm_A 31 SLKGKVASVTGSSGGIGWAVAEAYAQAGA-DVAIWYN 66 (279)
T ss_dssp CCTTCEEEETTTTSSHHHHHHHHHHHHTC-EEEEEES
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence 36788999997 57999999999999995 5777775
No 262
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=93.46 E-value=0.2 Score=52.99 Aligned_cols=32 Identities=28% Similarity=0.527 Sum_probs=29.2
Q ss_pred eEEEEcCChHHHHHHHHHHHhcC-CeEEEEeCC
Q 005071 366 KCLLLGAGTLGCQVARMLMAWGV-RKITLLDNG 397 (715)
Q Consensus 366 kVlIvGaGgLGs~VA~~La~~GV-g~ItLVD~D 397 (715)
||.|+|+|.+|+.+|..|+..|+ .+++|+|-+
T Consensus 2 kv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~ 34 (314)
T 3nep_X 2 KVTVIGAGNVGATVAECVARQDVAKEVVMVDIK 34 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCSSEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCc
Confidence 79999999999999999999997 589998873
No 263
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=93.45 E-value=0.053 Score=60.19 Aligned_cols=35 Identities=29% Similarity=0.486 Sum_probs=33.4
Q ss_pred hhccCeEEEEcCChHHHHHHHHHHHhcC--CeEEEEe
Q 005071 361 ILSSRKCLLLGAGTLGCQVARMLMAWGV--RKITLLD 395 (715)
Q Consensus 361 kL~~~kVlIvGaGgLGs~VA~~La~~GV--g~ItLVD 395 (715)
.++++||+|+|+||.|..+++.|+..|+ ++|+++|
T Consensus 183 ~l~~~rvlvlGAGgAg~aia~~L~~~G~~~~~I~vvd 219 (439)
T 2dvm_A 183 KISEITLALFGAGAAGFATLRILTEAGVKPENVRVVE 219 (439)
T ss_dssp CTTTCCEEEECCSHHHHHHHHHHHHTTCCGGGEEEEE
T ss_pred CccCCEEEEECccHHHHHHHHHHHHcCCCcCeEEEEE
Confidence 5678999999999999999999999999 9999999
No 264
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=93.45 E-value=0.29 Score=49.84 Aligned_cols=83 Identities=18% Similarity=0.213 Sum_probs=54.0
Q ss_pred hhccCeEEEEcC-ChHHHHHHHHHHHhcCCeEEEEeCCcccccCCCcCCCCCcchhcCCCCcHHHHHHHHHHhhCCCcEE
Q 005071 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAA 439 (715)
Q Consensus 361 kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~~KAeaaa~~L~~inP~v~v 439 (715)
.+++++|+|.|+ ||+|..+|+.|++.|.. +.++|.. ...+.+.+++.+++..+ ++
T Consensus 28 ~l~gk~~lVTGas~GIG~aia~~la~~G~~-V~~~~~~---------------------~~~~~~~~~~~l~~~~~--~~ 83 (271)
T 3v2g_A 28 SLAGKTAFVTGGSRGIGAAIAKRLALEGAA-VALTYVN---------------------AAERAQAVVSEIEQAGG--RA 83 (271)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESS---------------------CHHHHHHHHHHHHHTTC--CE
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEeCC---------------------CHHHHHHHHHHHHhcCC--cE
Confidence 478899999985 79999999999999964 5565431 12345566666766543 44
Q ss_pred EEEecccCCCCCCCCCccccccccchhhHHHhh-------ccCCEEEEeCC
Q 005071 440 EGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLI-------LSHDVIFLLTD 483 (715)
Q Consensus 440 ~~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li-------~~~DvV~~~tD 483 (715)
..+..++ .+.+.+.+++ ...|+||.+..
T Consensus 84 ~~~~~Dv----------------~d~~~v~~~~~~~~~~~g~iD~lvnnAg 118 (271)
T 3v2g_A 84 VAIRADN----------------RDAEAIEQAIRETVEALGGLDILVNSAG 118 (271)
T ss_dssp EEEECCT----------------TCHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred EEEECCC----------------CCHHHHHHHHHHHHHHcCCCcEEEECCC
Confidence 5555444 2233333333 37899998764
No 265
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=93.44 E-value=0.26 Score=51.68 Aligned_cols=32 Identities=34% Similarity=0.464 Sum_probs=28.5
Q ss_pred eEEEEcCChHHHHHHHHHHHhcC-CeEEEEeCC
Q 005071 366 KCLLLGAGTLGCQVARMLMAWGV-RKITLLDNG 397 (715)
Q Consensus 366 kVlIvGaGgLGs~VA~~La~~GV-g~ItLVD~D 397 (715)
||.|+|+|.+|+.+|..|+..|. .+++++|.+
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~ 34 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVV 34 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 79999999999999999999764 579999974
No 266
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=93.44 E-value=0.079 Score=56.60 Aligned_cols=37 Identities=19% Similarity=0.394 Sum_probs=32.1
Q ss_pred HhhccCeEEEEcCChHHHHHHHHHHHhcC-CeEEEEeC
Q 005071 360 DILSSRKCLLLGAGTLGCQVARMLMAWGV-RKITLLDN 396 (715)
Q Consensus 360 ~kL~~~kVlIvGaGgLGs~VA~~La~~GV-g~ItLVD~ 396 (715)
+.....||.|+|+|.+|+.+|..|+..|. .+|+|+|-
T Consensus 15 ~~~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di 52 (331)
T 4aj2_A 15 EQVPQNKITVVGVGAVGMACAISILMKDLADELALVDV 52 (331)
T ss_dssp --CCSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECS
T ss_pred ccCCCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeC
Confidence 56678899999999999999999999997 58999886
No 267
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=93.40 E-value=0.28 Score=51.45 Aligned_cols=33 Identities=36% Similarity=0.461 Sum_probs=29.6
Q ss_pred CeEEEEcCChHHHHHHHHHHHhcCCeEEEEeCC
Q 005071 365 RKCLLLGAGTLGCQVARMLMAWGVRKITLLDNG 397 (715)
Q Consensus 365 ~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~D 397 (715)
.||.|+|+|.+|..+|..|+..|.-.++|+|-+
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~ 35 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIV 35 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCC
Confidence 589999999999999999999997449999864
No 268
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=93.40 E-value=0.37 Score=48.20 Aligned_cols=32 Identities=22% Similarity=0.356 Sum_probs=26.7
Q ss_pred cCeEEEEc-CChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 364 SRKCLLLG-AGTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 364 ~~kVlIvG-aGgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
+++|+|.| .||+|..+|+.|++.|. ++.++|.
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r 34 (256)
T 1geg_A 2 KKVALVTGAGQGIGKAIALRLVKDGF-AVAIADY 34 (256)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeC
Confidence 46788997 57999999999999996 6777664
No 269
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=93.37 E-value=0.27 Score=48.65 Aligned_cols=34 Identities=24% Similarity=0.478 Sum_probs=29.1
Q ss_pred hccCeEEEEc-CChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 362 LSSRKCLLLG-AGTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 362 L~~~kVlIvG-aGgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
+++++|+|.| .||+|..+|+.|++.|. +++++|.
T Consensus 9 ~~~k~vlITGasggiG~~la~~l~~~G~-~V~~~~r 43 (254)
T 2wsb_A 9 LDGACAAVTGAGSGIGLEICRAFAASGA-RLILIDR 43 (254)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence 6778999997 58999999999999996 5777765
No 270
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=93.36 E-value=0.074 Score=50.13 Aligned_cols=32 Identities=28% Similarity=0.462 Sum_probs=29.1
Q ss_pred CeEEEEcCChHHHHHHHHHHHhcCCeEEEEeCC
Q 005071 365 RKCLLLGAGTLGCQVARMLMAWGVRKITLLDNG 397 (715)
Q Consensus 365 ~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~D 397 (715)
..|+|||+|-.|..+|..|++.|+ +++|+|..
T Consensus 3 ~dV~IIGaGpaGL~aA~~La~~G~-~V~v~Ek~ 34 (336)
T 3kkj_A 3 VPIAIIGTGIAGLSAAQALTAAGH-QVHLFDKS 34 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTC-CEEEECSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCC-CEEEEECC
Confidence 469999999999999999999998 68999964
No 271
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=93.35 E-value=0.31 Score=51.20 Aligned_cols=31 Identities=29% Similarity=0.270 Sum_probs=28.4
Q ss_pred eEEEEcCChHHHHHHHHHHHhcC-CeEEEEeC
Q 005071 366 KCLLLGAGTLGCQVARMLMAWGV-RKITLLDN 396 (715)
Q Consensus 366 kVlIvGaGgLGs~VA~~La~~GV-g~ItLVD~ 396 (715)
||.|||+|++|+.+|..|+..|. ++|.|+|-
T Consensus 2 KV~IiGaG~VG~~~a~~l~~~~~~~el~L~Di 33 (294)
T 2x0j_A 2 KLGFVGAGRVGSTSAFTCLLNLDVDEIALVDI 33 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHHSCCSEEEEECS
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCCEEEEEeC
Confidence 79999999999999999998885 89999885
No 272
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=93.33 E-value=0.28 Score=50.57 Aligned_cols=35 Identities=23% Similarity=0.296 Sum_probs=29.7
Q ss_pred hhccCeEEEEc-CChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 361 ILSSRKCLLLG-AGTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 361 kL~~~kVlIvG-aGgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
.+++++|+|.| .||+|..+|+.|++.|. ++.++|.
T Consensus 31 ~l~~k~vlVTGas~gIG~aia~~L~~~G~-~V~~~~r 66 (291)
T 3cxt_A 31 SLKGKIALVTGASYGIGFAIASAYAKAGA-TIVFNDI 66 (291)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence 47788999998 67999999999999996 5777665
No 273
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=93.33 E-value=0.22 Score=48.78 Aligned_cols=36 Identities=22% Similarity=0.517 Sum_probs=31.2
Q ss_pred hccCeEEEEc-CChHHHHHHHHHHHhcCC-eEEEEeCC
Q 005071 362 LSSRKCLLLG-AGTLGCQVARMLMAWGVR-KITLLDNG 397 (715)
Q Consensus 362 L~~~kVlIvG-aGgLGs~VA~~La~~GVg-~ItLVD~D 397 (715)
+++++|+|.| .|++|..+++.|++.|.. +++++|.+
T Consensus 16 m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~ 53 (242)
T 2bka_A 16 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRR 53 (242)
T ss_dssp HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESS
T ss_pred hcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcC
Confidence 5678999999 599999999999999963 88888864
No 274
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=93.32 E-value=0.23 Score=49.91 Aligned_cols=34 Identities=26% Similarity=0.379 Sum_probs=27.9
Q ss_pred hccCeEEEEc-CChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 362 LSSRKCLLLG-AGTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 362 L~~~kVlIvG-aGgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
+++++|+|.| .||+|..+|+.|++.|. +++++|.
T Consensus 2 l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r 36 (260)
T 1x1t_A 2 LKGKVAVVTGSTSGIGLGIATALAAQGA-DIVLNGF 36 (260)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEECC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHcCC-EEEEEeC
Confidence 4677888887 57999999999999996 4777664
No 275
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=93.32 E-value=0.18 Score=50.83 Aligned_cols=35 Identities=20% Similarity=0.395 Sum_probs=30.6
Q ss_pred hhccCeEEEEcC-ChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 361 kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
.+++++|+|.|+ ||+|..+|+.|++.|. ++.++|.
T Consensus 5 ~l~gk~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r 40 (255)
T 4eso_A 5 NYQGKKAIVIGGTHGMGLATVRRLVEGGA-EVLLTGR 40 (255)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeC
Confidence 578899999985 7999999999999997 6888776
No 276
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=93.31 E-value=0.24 Score=50.29 Aligned_cols=36 Identities=33% Similarity=0.465 Sum_probs=30.1
Q ss_pred HhhccCeEEEEc-CChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 360 DILSSRKCLLLG-AGTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 360 ~kL~~~kVlIvG-aGgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
-.+++++|+|.| .||+|..+|+.|++.|. ++.++|.
T Consensus 23 ~~l~gk~vlVTGas~gIG~aia~~la~~G~-~V~~~~r 59 (266)
T 3grp_A 23 FKLTGRKALVTGATGGIGEAIARCFHAQGA-IVGLHGT 59 (266)
T ss_dssp TCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred hccCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence 357889999997 57999999999999996 5777664
No 277
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=93.30 E-value=0.43 Score=48.82 Aligned_cols=35 Identities=23% Similarity=0.390 Sum_probs=29.7
Q ss_pred hhccCeEEEEcC-ChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 361 kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
.+.+++|+|.|+ ||+|..+|+.|++.|. ++.++|.
T Consensus 22 ~l~~k~~lVTGas~GIG~~ia~~la~~G~-~V~~~~r 57 (281)
T 3v2h_A 22 SMMTKTAVITGSTSGIGLAIARTLAKAGA-NIVLNGF 57 (281)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEECC
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence 467889999985 7999999999999997 6777665
No 278
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=93.29 E-value=0.079 Score=55.09 Aligned_cols=32 Identities=25% Similarity=0.466 Sum_probs=28.6
Q ss_pred CeEEEEcCChHHHHHHHHHHHhcCCeEEEEeCC
Q 005071 365 RKCLLLGAGTLGCQVARMLMAWGVRKITLLDNG 397 (715)
Q Consensus 365 ~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~D 397 (715)
.||.|||+|.+|+.+|+.|++.|. +++++|.+
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~g~-~V~~~~~~ 62 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKMGH-TVTVWNRT 62 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTC-CEEEECSS
T ss_pred CeEEEEcccHHHHHHHHHHHhCCC-EEEEEeCC
Confidence 589999999999999999999997 58888764
No 279
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=93.26 E-value=0.2 Score=51.16 Aligned_cols=36 Identities=22% Similarity=0.288 Sum_probs=27.8
Q ss_pred HhhccCeEEEEcC-ChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 360 DILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 360 ~kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
..+.+++|+|.|+ ||+|..+|+.|++.|. ++.++|.
T Consensus 24 ~~~~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r 60 (272)
T 4dyv_A 24 SKTGKKIAIVTGAGSGVGRAVAVALAGAGY-GVALAGR 60 (272)
T ss_dssp ----CCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEEC
Confidence 3567888888875 7999999999999997 5778775
No 280
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=93.25 E-value=0.24 Score=52.36 Aligned_cols=33 Identities=24% Similarity=0.509 Sum_probs=29.1
Q ss_pred cCeEEEEcCChHHHHHHHHHHHhcC-CeEEEEeC
Q 005071 364 SRKCLLLGAGTLGCQVARMLMAWGV-RKITLLDN 396 (715)
Q Consensus 364 ~~kVlIvGaGgLGs~VA~~La~~GV-g~ItLVD~ 396 (715)
..||.|+|+|.+|..++..|+..|. .+|.|+|-
T Consensus 5 ~~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di 38 (318)
T 1ez4_A 5 HQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDV 38 (318)
T ss_dssp BCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeC
Confidence 3689999999999999999999884 67888885
No 281
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=93.23 E-value=0.61 Score=47.35 Aligned_cols=36 Identities=17% Similarity=0.295 Sum_probs=31.2
Q ss_pred hccCeEEEEc-CChHHHHHHHHHHHhcCCeEEEEeCCc
Q 005071 362 LSSRKCLLLG-AGTLGCQVARMLMAWGVRKITLLDNGR 398 (715)
Q Consensus 362 L~~~kVlIvG-aGgLGs~VA~~La~~GVg~ItLVD~D~ 398 (715)
+++++|+|.| .||+|..+|+.|++.|. ++.++|.+.
T Consensus 4 l~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~ 40 (274)
T 3e03_A 4 LSGKTLFITGASRGIGLAIALRAARDGA-NVAIAAKSA 40 (274)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCC
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeccc
Confidence 5788999998 57999999999999997 788888754
No 282
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=93.22 E-value=0.11 Score=54.22 Aligned_cols=37 Identities=14% Similarity=0.227 Sum_probs=31.6
Q ss_pred HhhccCeEEEEc-CChHHHHHHHHHHHhcCCeEEEEeCC
Q 005071 360 DILSSRKCLLLG-AGTLGCQVARMLMAWGVRKITLLDNG 397 (715)
Q Consensus 360 ~kL~~~kVlIvG-aGgLGs~VA~~La~~GVg~ItLVD~D 397 (715)
+.+++.+|+|.| .|++|+.+++.|+..|. +++++|..
T Consensus 5 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~ 42 (357)
T 1rkx_A 5 SFWQGKRVFVTGHTGFKGGWLSLWLQTMGA-TVKGYSLT 42 (357)
T ss_dssp HHHTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred hhhCCCEEEEECCCchHHHHHHHHHHhCCC-eEEEEeCC
Confidence 457788999999 59999999999999995 78887763
No 283
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=93.22 E-value=0.21 Score=50.66 Aligned_cols=36 Identities=25% Similarity=0.375 Sum_probs=30.8
Q ss_pred HhhccCeEEEEcC-ChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 360 DILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 360 ~kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
..+++++|+|.|+ ||+|..+|+.|+..|. ++.++|.
T Consensus 26 ~~l~~k~vlVTGas~GIG~aia~~l~~~G~-~Vi~~~r 62 (281)
T 3ppi_A 26 KQFEGASAIVSGGAGGLGEATVRRLHADGL-GVVIADL 62 (281)
T ss_dssp GGGTTEEEEEETTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred hccCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeC
Confidence 4678889999985 7999999999999997 5777765
No 284
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=93.20 E-value=0.31 Score=48.91 Aligned_cols=35 Identities=20% Similarity=0.376 Sum_probs=29.0
Q ss_pred hhccCeEEEEcCC-h--HHHHHHHHHHHhcCCeEEEEeC
Q 005071 361 ILSSRKCLLLGAG-T--LGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 361 kL~~~kVlIvGaG-g--LGs~VA~~La~~GVg~ItLVD~ 396 (715)
.+++++|+|.|++ + +|..+|+.|++.|. ++.++|.
T Consensus 4 ~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~-~V~~~~r 41 (266)
T 3oig_A 4 SLEGRNIVVMGVANKRSIAWGIARSLHEAGA-RLIFTYA 41 (266)
T ss_dssp CCTTCEEEEECCCSTTSHHHHHHHHHHHTTC-EEEEEES
T ss_pred ccCCCEEEEEcCCCCCcHHHHHHHHHHHCCC-EEEEecC
Confidence 3678899999974 3 99999999999997 4777665
No 285
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=93.19 E-value=0.16 Score=52.56 Aligned_cols=40 Identities=20% Similarity=0.248 Sum_probs=30.7
Q ss_pred HHhhccCCEEEEeCCChHHHHHHHHHHHhcCCeEEEeeeCC
Q 005071 469 TDLILSHDVIFLLTDTRESRWLPTLLCANTNKITITAALGF 509 (715)
Q Consensus 469 ~~li~~~DvV~~~tDs~esR~li~~~~~~~~kp~I~aalG~ 509 (715)
+++++++|+|||+| ++++-.-.-..|.++|+++|.+.-|+
T Consensus 67 ~~~l~~~DvVIDft-~p~~~~~~~~~a~~~G~~vVigTtG~ 106 (273)
T 1dih_A 67 DAVKDDFDVFIDFT-RPEGTLNHLAFCRQHGKGMVIGTTGF 106 (273)
T ss_dssp TTTTTSCSEEEECS-CHHHHHHHHHHHHHTTCEEEECCCCC
T ss_pred HHHhcCCCEEEEcC-ChHHHHHHHHHHHhCCCCEEEECCCC
Confidence 34566899999999 56666667788999999988764454
No 286
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=93.19 E-value=0.21 Score=51.18 Aligned_cols=36 Identities=25% Similarity=0.332 Sum_probs=29.7
Q ss_pred HhhccCeEEEEc-CChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 360 DILSSRKCLLLG-AGTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 360 ~kL~~~kVlIvG-aGgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
..+++++|+|.| .||+|..+|+.|++.|. ++.++|.
T Consensus 25 ~~l~gk~vlVTGas~gIG~aia~~la~~G~-~V~~~~r 61 (277)
T 3gvc_A 25 PDLAGKVAIVTGAGAGIGLAVARRLADEGC-HVLCADI 61 (277)
T ss_dssp --CTTCEEEETTTTSTHHHHHHHHHHHTTC-EEEEEES
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence 457889999997 57999999999999997 6777765
No 287
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=93.18 E-value=0.34 Score=50.15 Aligned_cols=33 Identities=27% Similarity=0.400 Sum_probs=27.7
Q ss_pred cCeEEEEcC-ChHHHHHHHHHHHhcCCeEEEEeCC
Q 005071 364 SRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNG 397 (715)
Q Consensus 364 ~~kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD~D 397 (715)
+++|+|.|+ |++|+.+++.|+..|. +++++|..
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~ 35 (348)
T 1ek6_A 2 AEKVLVTGGAGYIGSHTVLELLEAGY-LPVVIDNF 35 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHTTC-CEEEEECS
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEecC
Confidence 368999985 9999999999999994 67777763
No 288
>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*
Probab=93.17 E-value=0.48 Score=49.45 Aligned_cols=38 Identities=24% Similarity=0.441 Sum_probs=28.7
Q ss_pred HhhccCeEEEEcC-ChHHHHHHHHHHHhcCCeEEEEeCC
Q 005071 360 DILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNG 397 (715)
Q Consensus 360 ~kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD~D 397 (715)
..+++++|+|.|+ |.+|+.+++.|+..|..+++++|..
T Consensus 42 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~ 80 (357)
T 2x6t_A 42 SGIEGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNL 80 (357)
T ss_dssp ------CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECC
T ss_pred ccCCCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecC
Confidence 3466789999998 9999999999999997678888764
No 289
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=93.16 E-value=0.42 Score=50.57 Aligned_cols=34 Identities=24% Similarity=0.265 Sum_probs=30.7
Q ss_pred ccCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 363 SSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 363 ~~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
.+.+|||+|+|++|..++..+..+|.+++..+|.
T Consensus 179 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~ 212 (363)
T 3m6i_A 179 LGDPVLICGAGPIGLITMLCAKAAGACPLVITDI 212 (363)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEES
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECC
Confidence 4679999999999999999999999988888876
No 290
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=93.10 E-value=0.15 Score=52.93 Aligned_cols=30 Identities=23% Similarity=0.440 Sum_probs=27.4
Q ss_pred eEEEEcCChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 366 KCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 366 kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
||.|||+|.+|+.+|..|++.|. +++++|.
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~g~-~V~~~~r 31 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDNGN-EVRIWGT 31 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCC-EEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhCCC-eEEEEEc
Confidence 79999999999999999999995 7888876
No 291
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=93.09 E-value=0.29 Score=49.73 Aligned_cols=35 Identities=17% Similarity=0.369 Sum_probs=29.3
Q ss_pred hhccCeEEEEc-CChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 361 ILSSRKCLLLG-AGTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 361 kL~~~kVlIvG-aGgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
.+++++|+|.| .||+|..+|+.|++.|. +++++|.
T Consensus 3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r 38 (280)
T 1xkq_A 3 RFSNKTVIITGSSNGIGRTTAILFAQEGA-NVTITGR 38 (280)
T ss_dssp TTTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeC
Confidence 36778899987 57999999999999996 6777775
No 292
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=93.09 E-value=0.43 Score=50.08 Aligned_cols=34 Identities=15% Similarity=0.147 Sum_probs=30.2
Q ss_pred cCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeCC
Q 005071 364 SRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNG 397 (715)
Q Consensus 364 ~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~D 397 (715)
..||.|||+|..|..+|+.|++.|.-+++++|.+
T Consensus 24 ~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~ 57 (317)
T 4ezb_A 24 MTTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLR 57 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCSEEEEECGG
T ss_pred CCeEEEECccHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 3689999999999999999999996588888874
No 293
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=93.07 E-value=0.24 Score=52.99 Aligned_cols=34 Identities=21% Similarity=0.305 Sum_probs=31.1
Q ss_pred ccCeEEEEcCChHHHHHHHHHHHhcC-CeEEEEeC
Q 005071 363 SSRKCLLLGAGTLGCQVARMLMAWGV-RKITLLDN 396 (715)
Q Consensus 363 ~~~kVlIvGaGgLGs~VA~~La~~GV-g~ItLVD~ 396 (715)
...||.|+|+|.+|+.+|..|+..|+ ++++|+|-
T Consensus 20 ~~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di 54 (330)
T 3ldh_A 20 SYNKITVVGCDAVGMADAISVLMKDLADEVALVDV 54 (330)
T ss_dssp CCCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEEC
Confidence 46799999999999999999999997 68999886
No 294
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=93.07 E-value=0.34 Score=49.72 Aligned_cols=88 Identities=15% Similarity=0.146 Sum_probs=56.3
Q ss_pred hhccCeEEEEc-CChHHHHHHHHHHHhcCCeEEEEeCCcccccCCCcCCCCCcchhcCCCCcHHHHHHHHHHhhCCCcEE
Q 005071 361 ILSSRKCLLLG-AGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAA 439 (715)
Q Consensus 361 kL~~~kVlIvG-aGgLGs~VA~~La~~GVg~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~~KAeaaa~~L~~inP~v~v 439 (715)
.|+++.++|-| .+|+|-.+|+.|++.|. ++.++|.+ ..+++.+++.|++.. .++
T Consensus 4 sL~gKvalVTGas~GIG~aiA~~la~~Ga-~Vv~~~~~----------------------~~~~~~~~~~i~~~g--~~~ 58 (254)
T 4fn4_A 4 SLKNKVVIVTGAGSGIGRAIAKKFALNDS-IVVAVELL----------------------EDRLNQIVQELRGMG--KEV 58 (254)
T ss_dssp GGTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESC----------------------HHHHHHHHHHHHHTT--CCE
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECC----------------------HHHHHHHHHHHHhcC--CcE
Confidence 47899999997 57999999999999996 57777752 235666777777654 345
Q ss_pred EEEecccCCCCCCCCCccccccccchhhHHHhhccCCEEEEeC
Q 005071 440 EGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLT 482 (715)
Q Consensus 440 ~~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~t 482 (715)
..+..++ + ..+..+.-.+.+.+-+...|++|+..
T Consensus 59 ~~~~~Dv-------t--~~~~v~~~~~~~~~~~G~iDiLVNNA 92 (254)
T 4fn4_A 59 LGVKADV-------S--KKKDVEEFVRRTFETYSRIDVLCNNA 92 (254)
T ss_dssp EEEECCT-------T--SHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred EEEEccC-------C--CHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 5555544 1 11111222233333445678888754
No 295
>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2
Probab=93.06 E-value=0.31 Score=49.52 Aligned_cols=35 Identities=14% Similarity=0.409 Sum_probs=29.6
Q ss_pred hhccCeEEEEc-CChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 361 ILSSRKCLLLG-AGTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 361 kL~~~kVlIvG-aGgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
++++++|+|.| .||+|..+|+.|++.|. ++.++|.
T Consensus 6 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r 41 (270)
T 1yde_A 6 RYAGKVVVVTGGGRGIGAGIVRAFVNSGA-RVVICDK 41 (270)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence 46788999997 57999999999999996 5777765
No 296
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=93.06 E-value=1 Score=45.69 Aligned_cols=77 Identities=22% Similarity=0.258 Sum_probs=51.5
Q ss_pred cCeEEEEcC-ChHHHHHHHHHHHhcCCeEEEEeCCcccccCCCcCCCCCcchhcCCCCcHHHHHHHHHHhhCCCcEEEEE
Q 005071 364 SRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEGV 442 (715)
Q Consensus 364 ~~kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~~KAeaaa~~L~~inP~v~v~~~ 442 (715)
.++|+|.|+ |++|..+++.|+..|--+++.++.+. .+.++ +.+.. +.+++ +
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~--------------------~~~~~----~~l~~--~~~~~--~ 56 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNP--------------------RKKAA----KELRL--QGAEV--V 56 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCT--------------------TSHHH----HHHHH--TTCEE--E
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCC--------------------CCHHH----HHHHH--CCCEE--E
Confidence 468999998 99999999999999844677766521 11111 12222 34443 3
Q ss_pred ecccCCCCCCCCCccccccccchhhHHHhhccCCEEEEeCCC
Q 005071 443 VMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDT 484 (715)
Q Consensus 443 ~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs 484 (715)
..++ .+.+.+.+.+++.|+||.+...
T Consensus 57 ~~D~----------------~d~~~l~~~~~~~d~vi~~a~~ 82 (299)
T 2wm3_A 57 QGDQ----------------DDQVIMELALNGAYATFIVTNY 82 (299)
T ss_dssp ECCT----------------TCHHHHHHHHTTCSEEEECCCH
T ss_pred EecC----------------CCHHHHHHHHhcCCEEEEeCCC
Confidence 3332 3567788889999999998763
No 297
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=93.06 E-value=0.46 Score=47.28 Aligned_cols=35 Identities=17% Similarity=0.171 Sum_probs=29.4
Q ss_pred hhccCeEEEEc-CChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 361 ILSSRKCLLLG-AGTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 361 kL~~~kVlIvG-aGgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
.+++++|+|.| .|++|..+++.|++.|. +++++|.
T Consensus 4 ~l~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r 39 (261)
T 1gee_A 4 DLEGKVVVITGSSTGLGKSMAIRFATEKA-KVVVNYR 39 (261)
T ss_dssp GGTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEcC
Confidence 46788999997 68999999999999996 5777665
No 298
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=93.05 E-value=0.29 Score=48.75 Aligned_cols=82 Identities=20% Similarity=0.206 Sum_probs=51.4
Q ss_pred hccCeEEEEc-CChHHHHHHHHHHHhcCCeEEEEeCCcccccCCCcCCCCCcchhcCCCCcHHHHHHHHHHhhCCCcEEE
Q 005071 362 LSSRKCLLLG-AGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAE 440 (715)
Q Consensus 362 L~~~kVlIvG-aGgLGs~VA~~La~~GVg~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~~KAeaaa~~L~~inP~v~v~ 440 (715)
+.+++|+|.| .||+|..+|+.|++.|.. +.++|.. ...+.+.+++.+++..+ ++.
T Consensus 2 l~~k~~lVTGas~gIG~~ia~~l~~~G~~-V~~~~~~---------------------~~~~~~~~~~~~~~~~~--~~~ 57 (246)
T 3osu_A 2 KMTKSALVTGASRGIGRSIALQLAEEGYN-VAVNYAG---------------------SKEKAEAVVEEIKAKGV--DSF 57 (246)
T ss_dssp CCSCEEEETTCSSHHHHHHHHHHHHTTCE-EEEEESS---------------------CHHHHHHHHHHHHHTTS--CEE
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCE-EEEEeCC---------------------CHHHHHHHHHHHHhcCC--cEE
Confidence 3567888887 589999999999999964 5555531 12345566666666543 445
Q ss_pred EEecccCCCCCCCCCccccccccchhhHHHhh-------ccCCEEEEeCC
Q 005071 441 GVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLI-------LSHDVIFLLTD 483 (715)
Q Consensus 441 ~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li-------~~~DvV~~~tD 483 (715)
.+..++ .+.+.+.+++ ...|+||.+..
T Consensus 58 ~~~~Dv----------------~d~~~v~~~~~~~~~~~g~id~lv~nAg 91 (246)
T 3osu_A 58 AIQANV----------------ADADEVKAMIKEVVSQFGSLDVLVNNAG 91 (246)
T ss_dssp EEECCT----------------TCHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred EEEccC----------------CCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 555443 2333333333 36788888754
No 299
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=93.05 E-value=0.37 Score=47.31 Aligned_cols=34 Identities=26% Similarity=0.421 Sum_probs=29.5
Q ss_pred hccCeEEEEcC-ChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 362 LSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 362 L~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
+++++|+|.|+ |++|..+++.|++.|. ++.++|.
T Consensus 5 ~~~~~vlVTGasggiG~~~a~~l~~~G~-~V~~~~r 39 (244)
T 1cyd_A 5 FSGLRALVTGAGKGIGRDTVKALHASGA-KVVAVTR 39 (244)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeC
Confidence 56789999986 8999999999999996 5777764
No 300
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=93.02 E-value=0.6 Score=48.01 Aligned_cols=32 Identities=38% Similarity=0.552 Sum_probs=27.6
Q ss_pred CeEEEEcC-ChHHHHHHHHHHHhcCCeEEEEeCC
Q 005071 365 RKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNG 397 (715)
Q Consensus 365 ~kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD~D 397 (715)
.+|+|.|+ |.+|+.+++.|+..| -+++++|.+
T Consensus 14 M~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~ 46 (342)
T 2x4g_A 14 VKYAVLGATGLLGHHAARAIRAAG-HDLVLIHRP 46 (342)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT-CEEEEEECT
T ss_pred CEEEEECCCcHHHHHHHHHHHHCC-CEEEEEecC
Confidence 37999995 999999999999999 578888764
No 301
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=93.01 E-value=0.28 Score=50.05 Aligned_cols=35 Identities=14% Similarity=0.378 Sum_probs=30.2
Q ss_pred hhccCeEEEEcC---ChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 361 ILSSRKCLLLGA---GTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 361 kL~~~kVlIvGa---GgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
.+++++|+|.|+ ||+|..+|+.|++.|. +++++|.
T Consensus 18 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~-~V~~~~r 55 (285)
T 2p91_A 18 LLEGKRALITGVANERSIAYGIAKSFHREGA-QLAFTYA 55 (285)
T ss_dssp TTTTCEEEECCCSSTTSHHHHHHHHHHHTTC-EEEEEES
T ss_pred ccCCCEEEEECCCCCCcHHHHHHHHHHHcCC-EEEEEeC
Confidence 477899999998 5999999999999995 5777775
No 302
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=92.97 E-value=0.23 Score=50.08 Aligned_cols=35 Identities=17% Similarity=0.327 Sum_probs=30.0
Q ss_pred hccCeEEEEcC---ChHHHHHHHHHHHhcCCeEEEEeCC
Q 005071 362 LSSRKCLLLGA---GTLGCQVARMLMAWGVRKITLLDNG 397 (715)
Q Consensus 362 L~~~kVlIvGa---GgLGs~VA~~La~~GVg~ItLVD~D 397 (715)
+++++|+|.|+ ||+|..+|+.|++.|. +++++|.+
T Consensus 7 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~-~V~~~~r~ 44 (265)
T 1qsg_A 7 LSGKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQN 44 (265)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTC-EEEEEESS
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEEcCc
Confidence 67889999998 6999999999999995 57777753
No 303
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=92.97 E-value=0.2 Score=51.46 Aligned_cols=32 Identities=25% Similarity=0.407 Sum_probs=28.3
Q ss_pred CeEEEEcCChHHHHHHHHHHHhcCCeEEEEeCC
Q 005071 365 RKCLLLGAGTLGCQVARMLMAWGVRKITLLDNG 397 (715)
Q Consensus 365 ~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~D 397 (715)
.||.|||+|.+|+.+|+.|++.|. +++++|.+
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G~-~V~~~dr~ 33 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAGF-DVTVWNRN 33 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHTC-CEEEECSS
T ss_pred CeEEEEccCHHHHHHHHHHHHCCC-eEEEEcCC
Confidence 479999999999999999999994 68887764
No 304
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...
Probab=92.95 E-value=0.42 Score=48.79 Aligned_cols=36 Identities=17% Similarity=0.282 Sum_probs=28.5
Q ss_pred HhhccCeEEEEc-CChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 360 DILSSRKCLLLG-AGTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 360 ~kL~~~kVlIvG-aGgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
..+++++|+|.| .||+|..+|+.|++.|. ++.++|.
T Consensus 19 ~~l~~k~~lVTGas~gIG~aia~~L~~~G~-~V~~~~r 55 (288)
T 2x9g_A 19 SHMEAPAAVVTGAAKRIGRAIAVKLHQTGY-RVVIHYH 55 (288)
T ss_dssp ---CCCEEEETTCSSHHHHHHHHHHHHHTC-EEEEEES
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHCCC-eEEEEeC
Confidence 357788899997 57999999999999996 5777765
No 305
>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2
Probab=92.95 E-value=0.22 Score=49.49 Aligned_cols=34 Identities=15% Similarity=0.361 Sum_probs=29.3
Q ss_pred hccCeEEEEc-CChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 362 LSSRKCLLLG-AGTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 362 L~~~kVlIvG-aGgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
+++++|+|.| .|++|..+++.|+..|. +++++|.
T Consensus 12 ~~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r 46 (265)
T 1h5q_A 12 FVNKTIIVTGGNRGIGLAFTRAVAAAGA-NVAVIYR 46 (265)
T ss_dssp CTTEEEEEETTTSHHHHHHHHHHHHTTE-EEEEEES
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeC
Confidence 5678899997 57999999999999995 7888776
No 306
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=92.94 E-value=0.42 Score=47.44 Aligned_cols=33 Identities=21% Similarity=0.361 Sum_probs=27.5
Q ss_pred ccCeEEEEcC-ChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 363 SSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 363 ~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
..++|+|.|+ ||+|..+|+.|++.|. ++.++|.
T Consensus 2 s~k~vlVTGas~GIG~a~a~~l~~~G~-~V~~~~r 35 (235)
T 3l6e_A 2 SLGHIIVTGAGSGLGRALTIGLVERGH-QVSMMGR 35 (235)
T ss_dssp -CCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEEC
Confidence 4578999985 7999999999999996 5777765
No 307
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=92.92 E-value=0.16 Score=51.43 Aligned_cols=35 Identities=23% Similarity=0.370 Sum_probs=29.6
Q ss_pred hhccCeEEEEcC-ChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 361 kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
++++++|+|.|+ ||+|..+|+.|++.|. ++.++|.
T Consensus 3 ~l~~k~vlITGas~gIG~aia~~l~~~G~-~V~~~~r 38 (263)
T 2a4k_A 3 RLSGKTILVTGAASGIGRAALDLFAREGA-SLVAVDR 38 (263)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeC
Confidence 467889999985 7999999999999996 6777765
No 308
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=92.91 E-value=0.77 Score=46.25 Aligned_cols=94 Identities=12% Similarity=0.068 Sum_probs=57.6
Q ss_pred eEEEEcC-ChHHHHHHHHHHHhcCCeEEEEeCCcccccCCCcCCCCCcchhcCCCCcHHHHHHHHHHhhCCCcEEEEEec
Q 005071 366 KCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEGVVM 444 (715)
Q Consensus 366 kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~~KAeaaa~~L~~inP~v~v~~~~~ 444 (715)
||+|.|+ |.+|+.+++.|...+-.+++.++.+.-.. ..+ ..+.++ .+..
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~-----------~~~-----------------~~~~v~--~~~~ 51 (289)
T 3e48_A 2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKV-----------PDD-----------------WRGKVS--VRQL 51 (289)
T ss_dssp CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGS-----------CGG-----------------GBTTBE--EEEC
T ss_pred EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHH-----------HHh-----------------hhCCCE--EEEc
Confidence 6999996 99999999999998335666666532110 001 012333 3443
Q ss_pred ccCCCCCCCCCccccccccchhhHHHhhccCCEEEEeCCCh-------HHHHHHHHHHHhcCC-eEEEe
Q 005071 445 AIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTR-------ESRWLPTLLCANTNK-ITITA 505 (715)
Q Consensus 445 ~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~-------esR~li~~~~~~~~k-p~I~a 505 (715)
++ .+.+.+.+.++++|+||.+.... ..-..+-++|.+.+. .+|..
T Consensus 52 D~----------------~d~~~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~l~~aa~~~gv~~iv~~ 104 (289)
T 3e48_A 52 DY----------------FNQESMVEAFKGMDTVVFIPSIIHPSFKRIPEVENLVYAAKQSGVAHIIFI 104 (289)
T ss_dssp CT----------------TCHHHHHHHTTTCSEEEECCCCCCSHHHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CC----------------CCHHHHHHHHhCCCEEEEeCCCCccchhhHHHHHHHHHHHHHcCCCEEEEE
Confidence 33 35677888999999999987642 111223445666664 45554
No 309
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=92.90 E-value=0.57 Score=48.14 Aligned_cols=36 Identities=19% Similarity=0.311 Sum_probs=30.9
Q ss_pred HhhccCeEEEEcC-ChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 360 DILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 360 ~kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
..|++++|+|.|+ ||+|..+|+.|++.|. ++.++|.
T Consensus 43 ~~l~gk~vlVTGas~GIG~aia~~la~~G~-~V~~~~r 79 (291)
T 3ijr_A 43 EKLKGKNVLITGGDSGIGRAVSIAFAKEGA-NIAIAYL 79 (291)
T ss_dssp STTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence 4688999999985 8999999999999996 5777765
No 310
>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G
Probab=92.89 E-value=0.4 Score=47.11 Aligned_cols=29 Identities=21% Similarity=0.291 Sum_probs=23.4
Q ss_pred cCeEEEEc-CChHHHHHHHHHHHhcCCeEEE
Q 005071 364 SRKCLLLG-AGTLGCQVARMLMAWGVRKITL 393 (715)
Q Consensus 364 ~~kVlIvG-aGgLGs~VA~~La~~GVg~ItL 393 (715)
+++|+|.| .|++|..+++.|++.|.. +++
T Consensus 1 ~k~vlVTGasggiG~~la~~l~~~G~~-v~~ 30 (244)
T 1edo_A 1 SPVVVVTGASRGIGKAIALSLGKAGCK-VLV 30 (244)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHTTCE-EEE
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCE-EEE
Confidence 35788887 579999999999999965 444
No 311
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=92.88 E-value=0.47 Score=49.46 Aligned_cols=95 Identities=17% Similarity=0.089 Sum_probs=57.9
Q ss_pred HhhccCeEEEEcC-ChHHHHHHHHHHHhcCCeEEEEeCCcccccCCCcCCCCCcchhcCCCCcHHHHHHHHHHhhCCCcE
Q 005071 360 DILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVA 438 (715)
Q Consensus 360 ~kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~~KAeaaa~~L~~inP~v~ 438 (715)
..+++++|+|.|+ ||+|..+|+.|++.|. ++.++|.+.-. .++.. ... ...+.+.+++.+.+.. .+
T Consensus 42 ~~l~gk~~lVTGas~GIG~aia~~la~~G~-~Vv~~~~~~~~-~~~~~----~~~-----~~~~~~~~~~~~~~~~--~~ 108 (317)
T 3oec_A 42 NRLQGKVAFITGAARGQGRTHAVRLAQDGA-DIVAIDLCRQQ-PNLDY----AQG-----SPEELKETVRLVEEQG--RR 108 (317)
T ss_dssp CTTTTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEECCCCC-TTCCS----CCC-----CHHHHHHHHHHHHHTT--CC
T ss_pred hccCCCEEEEeCCCcHHHHHHHHHHHHCCC-eEEEEeccccc-ccccc----ccc-----CHHHHHHHHHHHHhcC--Ce
Confidence 4678899999975 7999999999999996 67777765311 11111 000 1234455555565544 34
Q ss_pred EEEEecccCCCCCCCCCccccccccchhhHHHhh-------ccCCEEEEeCC
Q 005071 439 AEGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLI-------LSHDVIFLLTD 483 (715)
Q Consensus 439 v~~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li-------~~~DvV~~~tD 483 (715)
+..+..++ .+.+.+.+++ ...|+||.+..
T Consensus 109 ~~~~~~Dv----------------~d~~~v~~~~~~~~~~~g~iD~lVnnAg 144 (317)
T 3oec_A 109 IIARQADV----------------RDLASLQAVVDEALAEFGHIDILVSNVG 144 (317)
T ss_dssp EEEEECCT----------------TCHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred EEEEECCC----------------CCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 55665544 2333333333 47899998764
No 312
>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2
Probab=92.85 E-value=0.46 Score=47.62 Aligned_cols=36 Identities=19% Similarity=0.359 Sum_probs=30.0
Q ss_pred hhccCeEEEEcC-ChHHHHHHHHHHHhcCCeEEEEeCC
Q 005071 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNG 397 (715)
Q Consensus 361 kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD~D 397 (715)
.+++++|+|.|+ ||+|..+|+.|++.|. ++.++|.+
T Consensus 3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~ 39 (256)
T 2d1y_A 3 LFAGKGVLVTGGARGIGRAIAQAFAREGA-LVALCDLR 39 (256)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 367889999985 7999999999999995 67777753
No 313
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=92.84 E-value=0.32 Score=48.95 Aligned_cols=35 Identities=31% Similarity=0.463 Sum_probs=29.8
Q ss_pred hhccCeEEEEcC---ChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 361 ILSSRKCLLLGA---GTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 361 kL~~~kVlIvGa---GgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
.+++++|+|.|+ ||+|..+|+.|++.|. +++++|.
T Consensus 5 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~-~V~~~~r 42 (261)
T 2wyu_A 5 DLSGKKALVMGVTNQRSLGFAIAAKLKEAGA-EVALSYQ 42 (261)
T ss_dssp CCTTCEEEEESCCSSSSHHHHHHHHHHHHTC-EEEEEES
T ss_pred CCCCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcC
Confidence 356789999998 6999999999999996 5777765
No 314
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=92.84 E-value=0.29 Score=52.00 Aligned_cols=34 Identities=26% Similarity=0.558 Sum_probs=29.5
Q ss_pred ccCeEEEEcCChHHHHHHHHHHHhcC-CeEEEEeC
Q 005071 363 SSRKCLLLGAGTLGCQVARMLMAWGV-RKITLLDN 396 (715)
Q Consensus 363 ~~~kVlIvGaGgLGs~VA~~La~~GV-g~ItLVD~ 396 (715)
+..||.|+|+|.+|..++..|+..|. .+|.|+|-
T Consensus 8 ~~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di 42 (326)
T 2zqz_A 8 DHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDI 42 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeC
Confidence 34689999999999999999998884 67888885
No 315
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=92.80 E-value=0.41 Score=50.45 Aligned_cols=33 Identities=30% Similarity=0.472 Sum_probs=29.5
Q ss_pred eEEEEcC-ChHHHHHHHHHHHhcC-CeEEEEeCCc
Q 005071 366 KCLLLGA-GTLGCQVARMLMAWGV-RKITLLDNGR 398 (715)
Q Consensus 366 kVlIvGa-GgLGs~VA~~La~~GV-g~ItLVD~D~ 398 (715)
||+|+|+ |.+|..++..|+..|. .+|+|+|-+.
T Consensus 2 KI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~ 36 (314)
T 1mld_A 2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH 36 (314)
T ss_dssp EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS
T ss_pred EEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc
Confidence 7999998 9999999999998885 7899999864
No 316
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=92.80 E-value=0.48 Score=47.43 Aligned_cols=32 Identities=28% Similarity=0.396 Sum_probs=26.7
Q ss_pred cCeEEEEc-CChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 364 SRKCLLLG-AGTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 364 ~~kVlIvG-aGgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
+++|+|.| .||+|..+|+.|++.|. ++.++|.
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r 34 (258)
T 3a28_C 2 SKVAMVTGGAQGIGRGISEKLAADGF-DIAVADL 34 (258)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTC-EEEEEEC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence 56788887 57999999999999996 5777665
No 317
>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=92.80 E-value=0.17 Score=49.53 Aligned_cols=35 Identities=17% Similarity=0.197 Sum_probs=29.5
Q ss_pred ccCeEEEEc-CChHHHHHHHHHHHhcC-CeEEEEeCC
Q 005071 363 SSRKCLLLG-AGTLGCQVARMLMAWGV-RKITLLDNG 397 (715)
Q Consensus 363 ~~~kVlIvG-aGgLGs~VA~~La~~GV-g~ItLVD~D 397 (715)
++++|+|.| .|++|..+++.|+..|. .+++++|.+
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~ 38 (250)
T 1yo6_A 2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARD 38 (250)
T ss_dssp CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESS
T ss_pred CCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecC
Confidence 467899997 58999999999999995 688888864
No 318
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=92.79 E-value=0.29 Score=47.01 Aligned_cols=30 Identities=23% Similarity=0.385 Sum_probs=26.4
Q ss_pred eEEEEcC-ChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 366 KCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 366 kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
||+|.|+ |++|..+++.|++.| -++++++.
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g-~~V~~~~R 32 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRG-HEVTAIVR 32 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred eEEEEcCCchhHHHHHHHHHhCC-CEEEEEEc
Confidence 7999996 999999999999999 47777765
No 319
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=92.79 E-value=0.27 Score=49.74 Aligned_cols=35 Identities=23% Similarity=0.467 Sum_probs=29.4
Q ss_pred hhccCeEEEEcC-ChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 361 kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
.+++++|+|.|+ ||+|..+|+.|++.|. ++.+++.
T Consensus 26 ~l~~k~vlITGas~gIG~~la~~l~~~G~-~V~~~~r 61 (271)
T 4iin_A 26 QFTGKNVLITGASKGIGAEIAKTLASMGL-KVWINYR 61 (271)
T ss_dssp CCSCCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence 467889999985 7999999999999997 5666665
No 320
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=92.77 E-value=0.21 Score=51.67 Aligned_cols=34 Identities=24% Similarity=0.381 Sum_probs=29.4
Q ss_pred cCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeCCc
Q 005071 364 SRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGR 398 (715)
Q Consensus 364 ~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~D~ 398 (715)
..||.|||+|.+|..+|++|++.|. +++++|.+.
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~-~V~~~dr~~ 48 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPG-GVTVYDIRI 48 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTT-CEEEECSST
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCC-eEEEEeCCH
Confidence 3689999999999999999999995 688887643
No 321
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=92.77 E-value=0.37 Score=48.55 Aligned_cols=33 Identities=21% Similarity=0.315 Sum_probs=27.8
Q ss_pred hhccCeEEEEcC-ChHHHHHHHHHHHhcCCeEEEE
Q 005071 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLL 394 (715)
Q Consensus 361 kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItLV 394 (715)
++++++|+|.|+ ||+|..+|+.|++.|.. +.++
T Consensus 5 ~l~~k~vlVTGas~GIG~aia~~la~~G~~-V~~~ 38 (259)
T 3edm_A 5 RFTNRTIVVAGAGRDIGRACAIRFAQEGAN-VVLT 38 (259)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEE
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCE-EEEE
Confidence 578899999985 79999999999999974 5554
No 322
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=92.77 E-value=0.25 Score=51.32 Aligned_cols=33 Identities=39% Similarity=0.558 Sum_probs=29.3
Q ss_pred cCeEEEEc-CChHHHHHHHHHHHhcCCeEEEEeCC
Q 005071 364 SRKCLLLG-AGTLGCQVARMLMAWGVRKITLLDNG 397 (715)
Q Consensus 364 ~~kVlIvG-aGgLGs~VA~~La~~GVg~ItLVD~D 397 (715)
..||.||| +|.+|+.+|+.|.+.|. +++++|.+
T Consensus 21 ~~~I~iIGg~G~mG~~la~~l~~~G~-~V~~~~~~ 54 (298)
T 2pv7_A 21 IHKIVIVGGYGKLGGLFARYLRASGY-PISILDRE 54 (298)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHTTTC-CEEEECTT
T ss_pred CCEEEEEcCCCHHHHHHHHHHHhCCC-eEEEEECC
Confidence 35899999 99999999999999996 78888864
No 323
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=92.76 E-value=0.46 Score=48.96 Aligned_cols=35 Identities=20% Similarity=0.425 Sum_probs=30.6
Q ss_pred hhccCeEEEEcCC---hHHHHHHHHHHHhcCCeEEEEeC
Q 005071 361 ILSSRKCLLLGAG---TLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 361 kL~~~kVlIvGaG---gLGs~VA~~La~~GVg~ItLVD~ 396 (715)
.+++++|+|.|++ |+|..+|+.|++.|.. +.++|.
T Consensus 27 ~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~-V~~~~r 64 (296)
T 3k31_A 27 LMEGKKGVIIGVANDKSLAWGIAKAVCAQGAE-VALTYL 64 (296)
T ss_dssp TTTTCEEEEECCCSTTSHHHHHHHHHHHTTCE-EEEEES
T ss_pred ccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCE-EEEEeC
Confidence 4678999999986 8999999999999964 778775
No 324
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=92.75 E-value=0.84 Score=46.91 Aligned_cols=31 Identities=32% Similarity=0.643 Sum_probs=26.6
Q ss_pred CeEEEEc-CChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 365 RKCLLLG-AGTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 365 ~kVlIvG-aGgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
++|||.| .|++|+.+++.|+..|. +++++|.
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r 33 (347)
T 1orr_A 2 AKLLITGGCGFLGSNLASFALSQGI-DLIVFDN 33 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEEC
T ss_pred cEEEEeCCCchhHHHHHHHHHhCCC-EEEEEeC
Confidence 4799999 59999999999999994 6777765
No 325
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=92.74 E-value=0.3 Score=48.86 Aligned_cols=35 Identities=26% Similarity=0.367 Sum_probs=28.9
Q ss_pred hhccCeEEEEcC-ChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 361 kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
.+++++|+|.|+ ||+|..+|+.|++.|. ++.++|.
T Consensus 6 ~l~gk~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r 41 (248)
T 3op4_A 6 NLEGKVALVTGASRGIGKAIAELLAERGA-KVIGTAT 41 (248)
T ss_dssp CCTTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeC
Confidence 367889999985 7999999999999996 4666664
No 326
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=92.73 E-value=0.22 Score=50.25 Aligned_cols=60 Identities=15% Similarity=0.142 Sum_probs=39.3
Q ss_pred ccCeEEEEc-CChHHHHHHHHHHHhcCCeEEEEeCCcccccCCCcCCCCCcchhcCCCCcHHHHHHHHHHhhCCCcEEEE
Q 005071 363 SSRKCLLLG-AGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEG 441 (715)
Q Consensus 363 ~~~kVlIvG-aGgLGs~VA~~La~~GVg~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~~KAeaaa~~L~~inP~v~v~~ 441 (715)
++++|+|.| .||+|..+|+.|++.|..-+.+.+. ...+.+.+++.+.+..+ ++..
T Consensus 3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r----------------------~~~~~~~~~~~~~~~~~--~~~~ 58 (258)
T 3oid_A 3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYAR----------------------SKKAALETAEEIEKLGV--KVLV 58 (258)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESS----------------------CHHHHHHHHHHHHTTTC--CEEE
T ss_pred CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCC----------------------CHHHHHHHHHHHHhcCC--cEEE
Confidence 467888887 4799999999999999654432232 22355666666666543 4555
Q ss_pred Eeccc
Q 005071 442 VVMAI 446 (715)
Q Consensus 442 ~~~~I 446 (715)
+..++
T Consensus 59 ~~~Dv 63 (258)
T 3oid_A 59 VKANV 63 (258)
T ss_dssp EECCT
T ss_pred EEcCC
Confidence 55544
No 327
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=92.72 E-value=0.31 Score=54.04 Aligned_cols=33 Identities=21% Similarity=0.386 Sum_probs=29.9
Q ss_pred CeEEEEcCChHHHHHHHHHHHhcCCeEEEEeCCc
Q 005071 365 RKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGR 398 (715)
Q Consensus 365 ~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~D~ 398 (715)
.||.|||+|.+|+.+|..|+..|. +++++|.+.
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~-~V~~~D~~~ 35 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGA-NVRCIDTDR 35 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCC-EEEEEECCH
Confidence 589999999999999999999995 788999764
No 328
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=92.72 E-value=0.17 Score=49.41 Aligned_cols=34 Identities=21% Similarity=0.088 Sum_probs=27.9
Q ss_pred ccCeEEEEc-CChHHHHHHHHHHHhc-CCeEEEEeC
Q 005071 363 SSRKCLLLG-AGTLGCQVARMLMAWG-VRKITLLDN 396 (715)
Q Consensus 363 ~~~kVlIvG-aGgLGs~VA~~La~~G-Vg~ItLVD~ 396 (715)
..++|+|.| .|++|..+++.|+..| --++++++.
T Consensus 3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r 38 (253)
T 1xq6_A 3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVR 38 (253)
T ss_dssp SCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEES
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEc
Confidence 457899998 5999999999999995 246777765
No 329
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=92.72 E-value=0.34 Score=50.02 Aligned_cols=34 Identities=18% Similarity=0.407 Sum_probs=28.8
Q ss_pred hccCeEEEEc-CChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 362 LSSRKCLLLG-AGTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 362 L~~~kVlIvG-aGgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
+++++|+|.| .||+|..+|+.|++.|. +++++|.
T Consensus 24 l~~k~vlVTGas~gIG~aia~~L~~~G~-~V~~~~r 58 (297)
T 1xhl_A 24 FSGKSVIITGSSNGIGRSAAVIFAKEGA-QVTITGR 58 (297)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence 6778899987 57999999999999996 5777765
No 330
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=92.71 E-value=0.85 Score=47.19 Aligned_cols=37 Identities=27% Similarity=0.483 Sum_probs=29.0
Q ss_pred HhhccCeEEEEc-CChHHHHHHHHHHHhcCCeEEEEeCC
Q 005071 360 DILSSRKCLLLG-AGTLGCQVARMLMAWGVRKITLLDNG 397 (715)
Q Consensus 360 ~kL~~~kVlIvG-aGgLGs~VA~~La~~GVg~ItLVD~D 397 (715)
..++.++|+|.| .|++|..+++.|+..| -+++++|..
T Consensus 17 ~~~~~~~vlVTGatG~iG~~l~~~L~~~g-~~V~~~~r~ 54 (333)
T 2q1w_A 17 RGSHMKKVFITGICGQIGSHIAELLLERG-DKVVGIDNF 54 (333)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECC
T ss_pred ecCCCCEEEEeCCccHHHHHHHHHHHHCC-CEEEEEECC
Confidence 456778999998 5999999999999999 578887764
No 331
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=92.71 E-value=0.33 Score=54.48 Aligned_cols=34 Identities=15% Similarity=0.218 Sum_probs=30.1
Q ss_pred cCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeCCc
Q 005071 364 SRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGR 398 (715)
Q Consensus 364 ~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~D~ 398 (715)
..+|.|||+|..|+.+|++|++.|. +++++|.+.
T Consensus 10 ~~~IgvIGlG~MG~~lA~~La~~G~-~V~v~dr~~ 43 (497)
T 2p4q_A 10 SADFGLIGLAVMGQNLILNAADHGF-TVCAYNRTQ 43 (497)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTC-CEEEECSSS
T ss_pred CCCEEEEeeHHHHHHHHHHHHHCCC-EEEEEeCCH
Confidence 5689999999999999999999996 688888653
No 332
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=92.70 E-value=0.28 Score=50.15 Aligned_cols=33 Identities=18% Similarity=0.191 Sum_probs=27.9
Q ss_pred cCeEEEEcCChHHHHHHHHHHHhcC-CeEEEEeC
Q 005071 364 SRKCLLLGAGTLGCQVARMLMAWGV-RKITLLDN 396 (715)
Q Consensus 364 ~~kVlIvGaGgLGs~VA~~La~~GV-g~ItLVD~ 396 (715)
-.||.|||+|.+|+.+|+.|...|. .+++++|.
T Consensus 6 ~~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~ 39 (290)
T 3b1f_A 6 EKTIYIAGLGLIGASLALGIKRDHPHYKIVGYNR 39 (290)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECS
T ss_pred cceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcC
Confidence 3589999999999999999999974 36777665
No 333
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=92.64 E-value=0.14 Score=54.46 Aligned_cols=39 Identities=21% Similarity=0.414 Sum_probs=34.1
Q ss_pred hhccCeEEEEcCCh-HHHHHHHHHHHhcCCeEEEEeCCccc
Q 005071 361 ILSSRKCLLLGAGT-LGCQVARMLMAWGVRKITLLDNGRVA 400 (715)
Q Consensus 361 kL~~~kVlIvGaGg-LGs~VA~~La~~GVg~ItLVD~D~Ve 400 (715)
.+.+++|+|||+|. +|..+|+.|++.| .++|++|.+.+.
T Consensus 174 ~l~gk~vvVIG~G~iVG~~~A~~L~~~g-AtVtv~nR~~~~ 213 (320)
T 1edz_A 174 RLYGKKCIVINRSEIVGRPLAALLANDG-ATVYSVDVNNIQ 213 (320)
T ss_dssp TTTTCEEEEECCCTTTHHHHHHHHHTTS-CEEEEECSSEEE
T ss_pred CCCCCEEEEECCCcchHHHHHHHHHHCC-CEEEEEeCchHH
Confidence 58999999999996 5999999999999 469999886553
No 334
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=92.64 E-value=0.23 Score=50.54 Aligned_cols=38 Identities=18% Similarity=0.396 Sum_probs=31.7
Q ss_pred HHhhccCeEEEEcC---ChHHHHHHHHHHHhcCCeEEEEeCC
Q 005071 359 LDILSSRKCLLLGA---GTLGCQVARMLMAWGVRKITLLDNG 397 (715)
Q Consensus 359 q~kL~~~kVlIvGa---GgLGs~VA~~La~~GVg~ItLVD~D 397 (715)
+..+++++|+|.|+ +|+|..+|+.|++.|. ++.++|.+
T Consensus 21 M~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~-~V~~~~r~ 61 (280)
T 3nrc_A 21 MGFLAGKKILITGLLSNKSIAYGIAKAMHREGA-ELAFTYVG 61 (280)
T ss_dssp -CTTTTCEEEECCCCSTTCHHHHHHHHHHHTTC-EEEEEECT
T ss_pred ccccCCCEEEEECCCCCCCHHHHHHHHHHHcCC-EEEEeeCc
Confidence 45788999999996 3599999999999996 68888774
No 335
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=92.63 E-value=0.65 Score=47.09 Aligned_cols=37 Identities=24% Similarity=0.318 Sum_probs=31.9
Q ss_pred HhhccCeEEEEc-CChHHHHHHHHHHHhcCCeEEEEeCC
Q 005071 360 DILSSRKCLLLG-AGTLGCQVARMLMAWGVRKITLLDNG 397 (715)
Q Consensus 360 ~kL~~~kVlIvG-aGgLGs~VA~~La~~GVg~ItLVD~D 397 (715)
..+++++|+|.| .||+|..+|+.|++.|. ++.++|.+
T Consensus 6 ~~l~~k~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~ 43 (281)
T 3s55_A 6 ADFEGKTALITGGARGMGRSHAVALAEAGA-DIAICDRC 43 (281)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECC
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCC
Confidence 357889999997 57999999999999996 58888875
No 336
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=92.62 E-value=0.13 Score=56.11 Aligned_cols=35 Identities=26% Similarity=0.346 Sum_probs=30.3
Q ss_pred hhccCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 361 ILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 361 kL~~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
.|.+++|.|||+|.+|..+|+.|.+.|. ++..+|.
T Consensus 188 ~l~gktvGIIGlG~IG~~vA~~l~a~G~-~V~~~d~ 222 (393)
T 2nac_A 188 DLEAMHVGTVAAGRIGLAVLRRLAPFDV-HLHYTDR 222 (393)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHGGGTC-EEEEECS
T ss_pred cCCCCEEEEEeECHHHHHHHHHHHhCCC-EEEEEcC
Confidence 5889999999999999999999999995 4666654
No 337
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=92.56 E-value=0.33 Score=51.27 Aligned_cols=88 Identities=20% Similarity=0.245 Sum_probs=56.7
Q ss_pred cCeEEEEcCChHHHHHHHHHHHh--cCCeEEEEeCCcccccCCCcCCCCCcchhcCCCCcHHHHHHHHHHhhCCCcEEEE
Q 005071 364 SRKCLLLGAGTLGCQVARMLMAW--GVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEG 441 (715)
Q Consensus 364 ~~kVlIvGaGgLGs~VA~~La~~--GVg~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~~KAeaaa~~L~~inP~v~v~~ 441 (715)
..||.|||+|.+|...++.|.+. |+.-+.++|.+ ..|++.+++.. ++ ..
T Consensus 13 ~~rvgiiG~G~~g~~~~~~l~~~~~~~~lvav~d~~----------------------~~~~~~~~~~~-----~~--~~ 63 (354)
T 3q2i_A 13 KIRFALVGCGRIANNHFGALEKHADRAELIDVCDID----------------------PAALKAAVERT-----GA--RG 63 (354)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHTTTTEEEEEEECSS----------------------HHHHHHHHHHH-----CC--EE
T ss_pred cceEEEEcCcHHHHHHHHHHHhCCCCeEEEEEEcCC----------------------HHHHHHHHHHc-----CC--ce
Confidence 45899999999999999999987 55445566642 23455544433 12 22
Q ss_pred EecccCCCCCCCCCccccccccchhhHHHhhc--cCCEEEEeCCChHHHHHHHHHHHhcCCeEEE
Q 005071 442 VVMAIPMPGHPVPCQEEDSVLDDCRRLTDLIL--SHDVIFLLTDTRESRWLPTLLCANTNKITIT 504 (715)
Q Consensus 442 ~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~--~~DvV~~~tDs~esR~li~~~~~~~~kp~I~ 504 (715)
+ .+.+++++ +.|+|+.|+-+.. ..-+...|.+.||+++.
T Consensus 64 ~-----------------------~~~~~ll~~~~~D~V~i~tp~~~-h~~~~~~al~~gk~v~~ 104 (354)
T 3q2i_A 64 H-----------------------ASLTDMLAQTDADIVILTTPSGL-HPTQSIECSEAGFHVMT 104 (354)
T ss_dssp E-----------------------SCHHHHHHHCCCSEEEECSCGGG-HHHHHHHHHHTTCEEEE
T ss_pred e-----------------------CCHHHHhcCCCCCEEEECCCcHH-HHHHHHHHHHCCCCEEE
Confidence 2 12344554 7899999987643 33344566777887764
No 338
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=92.56 E-value=0.75 Score=46.82 Aligned_cols=35 Identities=20% Similarity=0.305 Sum_probs=29.9
Q ss_pred hhccCeEEEEcC-ChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 361 kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
.|++++|+|.|+ ||+|..+|+.|++.|. ++.++|.
T Consensus 28 ~l~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r 63 (273)
T 3uf0_A 28 SLAGRTAVVTGAGSGIGRAIAHGYARAGA-HVLAWGR 63 (273)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcC
Confidence 578899999984 7999999999999997 5777763
No 339
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=92.55 E-value=0.37 Score=48.95 Aligned_cols=35 Identities=29% Similarity=0.355 Sum_probs=28.3
Q ss_pred hhccCeEEEEcC-ChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 361 kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
.+++++|+|.|+ ||+|..+|+.|++.|.. +.++|.
T Consensus 25 ~l~~k~vlVTGas~gIG~aia~~la~~G~~-V~~~~~ 60 (269)
T 4dmm_A 25 PLTDRIALVTGASRGIGRAIALELAAAGAK-VAVNYA 60 (269)
T ss_dssp TTTTCEEEETTCSSHHHHHHHHHHHHTTCE-EEEEES
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEeC
Confidence 467889999985 79999999999999964 555443
No 340
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=92.51 E-value=0.2 Score=50.54 Aligned_cols=34 Identities=26% Similarity=0.386 Sum_probs=28.4
Q ss_pred ccCeEEEEc-CChHHHHHHHHHHHhcCCeEEEEeCC
Q 005071 363 SSRKCLLLG-AGTLGCQVARMLMAWGVRKITLLDNG 397 (715)
Q Consensus 363 ~~~kVlIvG-aGgLGs~VA~~La~~GVg~ItLVD~D 397 (715)
+.++|+|.| .|+||..+++.|++.| -+++++|.+
T Consensus 2 ~~k~vlVTGasg~IG~~la~~L~~~G-~~V~~~~r~ 36 (267)
T 3rft_A 2 AMKRLLVTGAAGQLGRVMRERLAPMA-EILRLADLS 36 (267)
T ss_dssp CEEEEEEESTTSHHHHHHHHHTGGGE-EEEEEEESS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhcC-CEEEEEecC
Confidence 346899998 6899999999999999 467887764
No 341
>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*
Probab=92.50 E-value=1.2 Score=47.02 Aligned_cols=32 Identities=22% Similarity=0.443 Sum_probs=27.4
Q ss_pred CeEEEEcC-ChHHHHHHHHHH-HhcCCeEEEEeCC
Q 005071 365 RKCLLLGA-GTLGCQVARMLM-AWGVRKITLLDNG 397 (715)
Q Consensus 365 ~kVlIvGa-GgLGs~VA~~La-~~GVg~ItLVD~D 397 (715)
.+|||.|+ |++|+.+++.|+ ..|. +++++|..
T Consensus 3 m~vlVTGatG~iG~~l~~~L~~~~g~-~V~~~~r~ 36 (397)
T 1gy8_A 3 MRVLVCGGAGYIGSHFVRALLRDTNH-SVVIVDSL 36 (397)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCCC-EEEEEECC
T ss_pred CEEEEECCCCHHHHHHHHHHHHhCCC-EEEEEecC
Confidence 48999985 999999999999 9994 78887764
No 342
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=92.50 E-value=0.086 Score=53.91 Aligned_cols=30 Identities=23% Similarity=0.320 Sum_probs=26.9
Q ss_pred CeEEEEcCChHHHHHHHHHHHhcCCeEEEEe
Q 005071 365 RKCLLLGAGTLGCQVARMLMAWGVRKITLLD 395 (715)
Q Consensus 365 ~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD 395 (715)
.||.|||+|.+|+.+|+.|++.|. +++++|
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~ 33 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLARAGH-QLHVTT 33 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHHTTC-EEEECC
T ss_pred CEEEEEccCHHHHHHHHHHHhCCC-EEEEEc
Confidence 489999999999999999999996 677776
No 343
>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}
Probab=92.49 E-value=0.23 Score=53.50 Aligned_cols=35 Identities=26% Similarity=0.299 Sum_probs=27.6
Q ss_pred hhccCeEEEEcC-ChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 361 kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
....++|||.|+ |++|+.+++.|+..|. ++++++.
T Consensus 66 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~R 101 (427)
T 4f6c_A 66 HRPLGNTLLTGATGFLGAYLIEALQGYSH-RIYCFIR 101 (427)
T ss_dssp CCCCEEEEEECTTSHHHHHHHHHHTTTEE-EEEEEEE
T ss_pred CCCCCEEEEecCCcHHHHHHHHHHHcCCC-EEEEEEC
Confidence 344568999996 9999999999988774 6666554
No 344
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=92.46 E-value=0.38 Score=50.87 Aligned_cols=38 Identities=24% Similarity=0.557 Sum_probs=31.7
Q ss_pred HhhccCeEEEEcC-ChHHHHHHHHHHHhcCCeEEEEeCC
Q 005071 360 DILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNG 397 (715)
Q Consensus 360 ~kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD~D 397 (715)
.+++..+|+|.|+ |.+|..+++.|+..|.-+++++|..
T Consensus 28 ~~~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~ 66 (377)
T 2q1s_A 28 SKLANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNL 66 (377)
T ss_dssp GGGTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCC
T ss_pred HHhCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECC
Confidence 3567789999996 9999999999999995578887753
No 345
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=92.44 E-value=0.45 Score=47.67 Aligned_cols=30 Identities=30% Similarity=0.346 Sum_probs=25.5
Q ss_pred eEEEEcC-ChHHHHHHHHHHHh--cCCeEEEEeC
Q 005071 366 KCLLLGA-GTLGCQVARMLMAW--GVRKITLLDN 396 (715)
Q Consensus 366 kVlIvGa-GgLGs~VA~~La~~--GVg~ItLVD~ 396 (715)
+|+|.|+ |.+|+.+++.|+.. |. +++.++.
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~-~V~~~~r 33 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPAS-QIVAIVR 33 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGG-GEEEEES
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCc-eEEEEEc
Confidence 5899997 99999999999998 74 6777765
No 346
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=92.40 E-value=0.52 Score=48.55 Aligned_cols=36 Identities=17% Similarity=0.379 Sum_probs=30.0
Q ss_pred HhhccCeEEEEcCC-h--HHHHHHHHHHHhcCCeEEEEeC
Q 005071 360 DILSSRKCLLLGAG-T--LGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 360 ~kL~~~kVlIvGaG-g--LGs~VA~~La~~GVg~ItLVD~ 396 (715)
..+++++|+|.|++ + +|..+|+.|++.|.. +.++|.
T Consensus 27 ~~l~gk~~lVTGasg~~GIG~aia~~la~~G~~-V~~~~r 65 (293)
T 3grk_A 27 GLLQGKRGLILGVANNRSIAWGIAKAAREAGAE-LAFTYQ 65 (293)
T ss_dssp CTTTTCEEEEECCCSSSSHHHHHHHHHHHTTCE-EEEEEC
T ss_pred ccCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCE-EEEEcC
Confidence 35788999999984 4 999999999999964 777765
No 347
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}
Probab=92.38 E-value=0.33 Score=49.55 Aligned_cols=35 Identities=20% Similarity=0.289 Sum_probs=26.9
Q ss_pred HhhccCeEEEEc-CChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 360 DILSSRKCLLLG-AGTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 360 ~kL~~~kVlIvG-aGgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
..++ ++|+|.| .||+|..+|+.|++.|. ++.++|.
T Consensus 18 ~~~~-k~vlVTGas~gIG~aia~~La~~G~-~V~~~~r 53 (272)
T 2nwq_A 18 SHMS-STLFITGATSGFGEACARRFAEAGW-SLVLTGR 53 (272)
T ss_dssp ---C-CEEEESSTTTSSHHHHHHHHHHTTC-EEEEEES
T ss_pred CCcC-cEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEEC
Confidence 4556 7788887 57999999999999996 5777765
No 348
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Probab=92.36 E-value=0.42 Score=49.06 Aligned_cols=34 Identities=29% Similarity=0.260 Sum_probs=27.8
Q ss_pred hhccCeEEEEc-CChHHHHHHHHHHHhcCCeEEEEe
Q 005071 361 ILSSRKCLLLG-AGTLGCQVARMLMAWGVRKITLLD 395 (715)
Q Consensus 361 kL~~~kVlIvG-aGgLGs~VA~~La~~GVg~ItLVD 395 (715)
.+++++|+|.| .||+|..+|+.|++.|. +++++|
T Consensus 6 ~l~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~ 40 (291)
T 1e7w_A 6 APTVPVALVTGAAKRLGRSIAEGLHAEGY-AVCLHY 40 (291)
T ss_dssp --CCCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEE
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEc
Confidence 46788888887 57999999999999996 677776
No 349
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=92.35 E-value=0.36 Score=49.71 Aligned_cols=36 Identities=22% Similarity=0.255 Sum_probs=30.0
Q ss_pred HhhccCeEEEEcC-ChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 360 DILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 360 ~kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
.+|++++|+|.|+ ||+|..+|+.|++.|. ++.++|.
T Consensus 45 ~~l~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~~ 81 (294)
T 3r3s_A 45 GRLKDRKALVTGGDSGIGRAAAIAYAREGA-DVAINYL 81 (294)
T ss_dssp STTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECC
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence 4678999999985 7999999999999996 4666554
No 350
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=92.29 E-value=0.93 Score=47.95 Aligned_cols=34 Identities=26% Similarity=0.258 Sum_probs=29.2
Q ss_pred ccCeEEEEcC-ChHHHHHHHHHHHhcCCeEEEEeCC
Q 005071 363 SSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNG 397 (715)
Q Consensus 363 ~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD~D 397 (715)
+.++|+|.|+ |.+|+.+++.|+..|. +++++|.+
T Consensus 28 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~ 62 (379)
T 2c5a_A 28 ENLKISITGAGGFIASHIARRLKHEGH-YVIASDWK 62 (379)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred cCCeEEEECCccHHHHHHHHHHHHCCC-eEEEEECC
Confidence 4568999998 9999999999999994 78888764
No 351
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=92.28 E-value=0.49 Score=47.75 Aligned_cols=36 Identities=17% Similarity=0.281 Sum_probs=27.6
Q ss_pred HhhccCeEEEEc-CChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 360 DILSSRKCLLLG-AGTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 360 ~kL~~~kVlIvG-aGgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
..+++++|+|.| .||+|..+|+.|++.|. +++++|.
T Consensus 7 ~~~~~k~~lVTGas~gIG~~ia~~l~~~G~-~V~~~~r 43 (276)
T 1mxh_A 7 EASECPAAVITGGARRIGHSIAVRLHQQGF-RVVVHYR 43 (276)
T ss_dssp ----CCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred hccCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence 346778899887 57999999999999995 6777775
No 352
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=92.26 E-value=0.37 Score=50.68 Aligned_cols=87 Identities=16% Similarity=0.072 Sum_probs=54.9
Q ss_pred CeEEEEcCChHHHHHHHHHHHh-cCCeEEEEeCCcccccCCCcCCCCCcchhcCCCCcHHHHHHHHHHhhCCCcEEEEEe
Q 005071 365 RKCLLLGAGTLGCQVARMLMAW-GVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEGVV 443 (715)
Q Consensus 365 ~kVlIvGaGgLGs~VA~~La~~-GVg~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~~KAeaaa~~L~~inP~v~v~~~~ 443 (715)
.||.|||+|.+|...++.|.+. |+.-+.++|. ...|++.+++. +. + ..+
T Consensus 5 ~rvgiiG~G~~g~~~~~~l~~~~~~~l~av~d~----------------------~~~~~~~~a~~----~g-~--~~~- 54 (344)
T 3euw_A 5 LRIALFGAGRIGHVHAANIAANPDLELVVIADP----------------------FIEGAQRLAEA----NG-A--EAV- 54 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECS----------------------SHHHHHHHHHT----TT-C--EEE-
T ss_pred eEEEEECCcHHHHHHHHHHHhCCCcEEEEEECC----------------------CHHHHHHHHHH----cC-C--cee-
Confidence 5899999999999999999986 4333335554 12233333332 22 2 222
Q ss_pred cccCCCCCCCCCccccccccchhhHHHhhc--cCCEEEEeCCChHHHHHHHHHHHhcCCeEEE
Q 005071 444 MAIPMPGHPVPCQEEDSVLDDCRRLTDLIL--SHDVIFLLTDTRESRWLPTLLCANTNKITIT 504 (715)
Q Consensus 444 ~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~--~~DvV~~~tDs~esR~li~~~~~~~~kp~I~ 504 (715)
.+.+++++ +.|+|+.|+-+.. ..-+...|.+.||+++.
T Consensus 55 ----------------------~~~~~~l~~~~~D~V~i~tp~~~-h~~~~~~al~~gk~v~~ 94 (344)
T 3euw_A 55 ----------------------ASPDEVFARDDIDGIVIGSPTST-HVDLITRAVERGIPALC 94 (344)
T ss_dssp ----------------------SSHHHHTTCSCCCEEEECSCGGG-HHHHHHHHHHTTCCEEE
T ss_pred ----------------------CCHHHHhcCCCCCEEEEeCCchh-hHHHHHHHHHcCCcEEE
Confidence 23456666 7899999997644 34445567788887764
No 353
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=92.25 E-value=0.81 Score=47.09 Aligned_cols=36 Identities=22% Similarity=0.221 Sum_probs=30.5
Q ss_pred hhccCeEEEEcC-ChHHHHHHHHHHHhcCCeEEEEeCC
Q 005071 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNG 397 (715)
Q Consensus 361 kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD~D 397 (715)
++++++|+|.|+ ||+|..+|+.|++.|. ++.++|.+
T Consensus 25 ~l~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~ 61 (299)
T 3t7c_A 25 KVEGKVAFITGAARGQGRSHAITLAREGA-DIIAIDVC 61 (299)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECC
T ss_pred ccCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEecc
Confidence 578899999985 7999999999999996 56777764
No 354
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=92.24 E-value=0.35 Score=48.35 Aligned_cols=37 Identities=16% Similarity=0.310 Sum_probs=32.0
Q ss_pred HHhhccCeEEEEcC---ChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 359 LDILSSRKCLLLGA---GTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 359 q~kL~~~kVlIvGa---GgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
...+++++|+|.|+ ||+|..+|+.|++.|. ++.++|.
T Consensus 9 ~~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~-~V~~~~r 48 (271)
T 3ek2_A 9 MGFLDGKRILLTGLLSNRSIAYGIAKACKREGA-ELAFTYV 48 (271)
T ss_dssp CCTTTTCEEEECCCCSTTSHHHHHHHHHHHTTC-EEEEEES
T ss_pred ccccCCCEEEEeCCCCCCcHHHHHHHHHHHcCC-CEEEEec
Confidence 35678999999996 5999999999999997 6778775
No 355
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=92.20 E-value=0.3 Score=48.86 Aligned_cols=35 Identities=23% Similarity=0.236 Sum_probs=29.1
Q ss_pred hhccCeEEEEcC-ChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 361 kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
.+++++|+|.|+ |++|..+++.|+..|. +++++|.
T Consensus 18 ~~~~k~vlItGasggiG~~la~~l~~~G~-~v~~~~r 53 (274)
T 1ja9_A 18 PLAGKVALTTGAGRGIGRGIAIELGRRGA-SVVVNYG 53 (274)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcC
Confidence 467889999985 7999999999999995 5766664
No 356
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=92.20 E-value=0.26 Score=50.99 Aligned_cols=90 Identities=13% Similarity=0.127 Sum_probs=55.4
Q ss_pred hccCeEEEEcCChHHHH-HHHHHHHh-cCCeEEEEeCCcccccCCCcCCCCCcchhcCCCCcHHHHHHHHHHhhCCCcEE
Q 005071 362 LSSRKCLLLGAGTLGCQ-VARMLMAW-GVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAA 439 (715)
Q Consensus 362 L~~~kVlIvGaGgLGs~-VA~~La~~-GVg~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~~KAeaaa~~L~~inP~v~v 439 (715)
++..||.|||+|.+|.. .++.|... |+.-+.++|. ...|++.+++... +.
T Consensus 4 M~~~~igiIG~G~~g~~~~~~~l~~~~~~~l~av~d~----------------------~~~~~~~~a~~~~-----~~- 55 (308)
T 3uuw_A 4 MKNIKMGMIGLGSIAQKAYLPILTKSERFEFVGAFTP----------------------NKVKREKICSDYR-----IM- 55 (308)
T ss_dssp -CCCEEEEECCSHHHHHHTHHHHTSCSSSEEEEEECS----------------------CHHHHHHHHHHHT-----CC-
T ss_pred cccCcEEEEecCHHHHHHHHHHHHhCCCeEEEEEECC----------------------CHHHHHHHHHHcC-----CC-
Confidence 34579999999999996 88888764 4433446554 2234554444321 10
Q ss_pred EEEecccCCCCCCCCCccccccccchhhHHHhhccCCEEEEeCCChHHHHHHHHHHHhcCCeEEE
Q 005071 440 EGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTRESRWLPTLLCANTNKITIT 504 (715)
Q Consensus 440 ~~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~esR~li~~~~~~~~kp~I~ 504 (715)
...+.++++++.|+|+.|+-+.... -+...|.+.||+++.
T Consensus 56 ------------------------~~~~~~~ll~~~D~V~i~tp~~~h~-~~~~~al~~gk~vl~ 95 (308)
T 3uuw_A 56 ------------------------PFDSIESLAKKCDCIFLHSSTETHY-EIIKILLNLGVHVYV 95 (308)
T ss_dssp ------------------------BCSCHHHHHTTCSEEEECCCGGGHH-HHHHHHHHTTCEEEE
T ss_pred ------------------------CcCCHHHHHhcCCEEEEeCCcHhHH-HHHHHHHHCCCcEEE
Confidence 0223455666889999988765433 334456778887664
No 357
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=92.19 E-value=0.22 Score=52.53 Aligned_cols=34 Identities=24% Similarity=0.345 Sum_probs=30.5
Q ss_pred cCeEEEEcCChHHHHHHHHHHHhcC-CeEEEEeCC
Q 005071 364 SRKCLLLGAGTLGCQVARMLMAWGV-RKITLLDNG 397 (715)
Q Consensus 364 ~~kVlIvGaGgLGs~VA~~La~~GV-g~ItLVD~D 397 (715)
..||.|+|+|.+|..+|..|+..|. ++|+|+|-+
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~ 41 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQTANELVLIDVF 41 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 4689999999999999999999985 689999974
No 358
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=92.18 E-value=0.51 Score=47.63 Aligned_cols=28 Identities=25% Similarity=0.387 Sum_probs=23.0
Q ss_pred ccCeEEEEc-CChHHHHHHHHHHHhcCCe
Q 005071 363 SSRKCLLLG-AGTLGCQVARMLMAWGVRK 390 (715)
Q Consensus 363 ~~~kVlIvG-aGgLGs~VA~~La~~GVg~ 390 (715)
++++|+|.| .||+|..+|+.|++.|..-
T Consensus 25 ~~k~vlITGas~gIG~a~a~~l~~~G~~V 53 (272)
T 4e3z_A 25 DTPVVLVTGGSRGIGAAVCRLAARQGWRV 53 (272)
T ss_dssp CSCEEEETTTTSHHHHHHHHHHHHTTCEE
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEE
Confidence 356778877 5899999999999999753
No 359
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=92.16 E-value=0.14 Score=53.08 Aligned_cols=35 Identities=29% Similarity=0.470 Sum_probs=32.5
Q ss_pred hhccCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 361 ILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 361 kL~~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
.|.+++|+|+|+|.+|..+|+.|.+.|. +++++|.
T Consensus 152 ~l~g~~v~IiG~G~iG~~~a~~l~~~G~-~V~~~dr 186 (293)
T 3d4o_A 152 TIHGANVAVLGLGRVGMSVARKFAALGA-KVKVGAR 186 (293)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCCEEEEEeeCHHHHHHHHHHHhCCC-EEEEEEC
Confidence 5789999999999999999999999998 8998886
No 360
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=92.12 E-value=0.48 Score=53.12 Aligned_cols=122 Identities=11% Similarity=0.069 Sum_probs=66.2
Q ss_pred cCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeCCcccccCCCcCCCCCcchhcCCCCcHHHHHHHHHHhh-CCCcEEEEE
Q 005071 364 SRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERI-FPAVAAEGV 442 (715)
Q Consensus 364 ~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~~KAeaaa~~L~~i-nP~v~v~~~ 442 (715)
..+|.|||+|..|..+|++|++.|. +++++|.+.=....+...-. ... +-.-+....+.+..+ .+++-+..+
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L~~~G~-~V~v~dr~~~~~~~l~~~g~---~g~---~i~~~~s~~e~v~~l~~aDvVil~V 76 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNMNDHGF-VVCAFNRTVSKVDDFLANEA---KGT---KVVGAQSLKEMVSKLKKPRRIILLV 76 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTC-CEEEECSSTHHHHHHHHTTT---TTS---SCEECSSHHHHHHTBCSSCEEEECS
T ss_pred CCEEEEEChhHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhccc---CCC---ceeccCCHHHHHhhccCCCEEEEec
Confidence 3589999999999999999999996 78888875422221111100 000 000011122222222 244444443
Q ss_pred ecccCCCCCCCCCccccccccchhhHHHhhccCCEEEEeCCChH--HHHHHHHHHHhcCCeEEEee
Q 005071 443 VMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTRE--SRWLPTLLCANTNKITITAA 506 (715)
Q Consensus 443 ~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~e--sR~li~~~~~~~~kp~I~aa 506 (715)
+. + +......+.+...++.-++|||++-+.. ++.+ ...+...++.++.+.
T Consensus 77 p~----~---------~~v~~vl~~l~~~L~~g~iIId~st~~~~~t~~~-~~~l~~~Gi~fvd~p 128 (484)
T 4gwg_A 77 KA----G---------QAVDDFIEKLVPLLDTGDIIIDGGNSEYRDTTRR-CRDLKAKGILFVGSG 128 (484)
T ss_dssp CS----S---------HHHHHHHHHHGGGCCTTCEEEECSCCCHHHHHHH-HHHHHHTTCEEEEEE
T ss_pred CC----h---------HHHHHHHHHHHHhcCCCCEEEEcCCCCchHHHHH-HHHHHhhccccccCC
Confidence 21 0 0011122444555677899999887653 3433 345566788888763
No 361
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=92.04 E-value=0.5 Score=48.01 Aligned_cols=32 Identities=19% Similarity=0.343 Sum_probs=25.2
Q ss_pred hccCeEEEEcC-ChHHHHHHHHHHHhcCCeEEEE
Q 005071 362 LSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLL 394 (715)
Q Consensus 362 L~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItLV 394 (715)
+++++|+|.|+ ||+|..+|+.|++.|.. +.++
T Consensus 25 ~~~k~~lVTGas~GIG~aia~~la~~G~~-Vv~~ 57 (267)
T 3u5t_A 25 ETNKVAIVTGASRGIGAAIAARLASDGFT-VVIN 57 (267)
T ss_dssp --CCEEEEESCSSHHHHHHHHHHHHHTCE-EEEE
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEE
Confidence 56888999985 79999999999999964 4443
No 362
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}
Probab=92.03 E-value=0.32 Score=48.26 Aligned_cols=33 Identities=24% Similarity=0.356 Sum_probs=26.8
Q ss_pred hccCeEEEEcC-ChHHHHHHHHHHHhcCCeEEEEe
Q 005071 362 LSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLD 395 (715)
Q Consensus 362 L~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD 395 (715)
+++++|+|.|+ ||+|..+|+.|++.|. ++.+++
T Consensus 5 l~~k~vlITGas~gIG~~~a~~l~~~G~-~v~~~~ 38 (255)
T 3icc_A 5 LKGKVALVTGASRGIGRAIAKRLANDGA-LVAIHY 38 (255)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEE
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEe
Confidence 57788999985 7999999999999996 444433
No 363
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=91.99 E-value=0.46 Score=50.35 Aligned_cols=90 Identities=9% Similarity=-0.021 Sum_probs=55.8
Q ss_pred hccCeEEEEcCChHHH-HHHHHHHHh-cCCeEEEEeCCcccccCCCcCCCCCcchhcCCCCcHHHHHHHHHHhhCCCcEE
Q 005071 362 LSSRKCLLLGAGTLGC-QVARMLMAW-GVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAA 439 (715)
Q Consensus 362 L~~~kVlIvGaGgLGs-~VA~~La~~-GVg~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~~KAeaaa~~L~~inP~v~v 439 (715)
.+..||.|||+|.+|. ..++.|... |+.-..++|.+ ..|++.+++.. ++.
T Consensus 25 m~~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~----------------------~~~~~~~a~~~-----g~~- 76 (350)
T 3rc1_A 25 ANPIRVGVIGCADIAWRRALPALEAEPLTEVTAIASRR----------------------WDRAKRFTERF-----GGE- 76 (350)
T ss_dssp -CCEEEEEESCCHHHHHTHHHHHHHCTTEEEEEEEESS----------------------HHHHHHHHHHH-----CSE-
T ss_pred CCceEEEEEcCcHHHHHHHHHHHHhCCCeEEEEEEcCC----------------------HHHHHHHHHHc-----CCC-
Confidence 4456899999999998 789999887 44444466652 22444444433 121
Q ss_pred EEEecccCCCCCCCCCccccccccchhhHHHhhc--cCCEEEEeCCChHHHHHHHHHHHhcCCeEEE
Q 005071 440 EGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLIL--SHDVIFLLTDTRESRWLPTLLCANTNKITIT 504 (715)
Q Consensus 440 ~~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~--~~DvV~~~tDs~esR~li~~~~~~~~kp~I~ 504 (715)
.+ ...+++++ +.|+|+.||-+.. ..-+...|.+.||+++.
T Consensus 77 -~~-----------------------~~~~~ll~~~~~D~V~i~tp~~~-h~~~~~~al~aGk~Vl~ 118 (350)
T 3rc1_A 77 -PV-----------------------EGYPALLERDDVDAVYVPLPAVL-HAEWIDRALRAGKHVLA 118 (350)
T ss_dssp -EE-----------------------ESHHHHHTCTTCSEEEECCCGGG-HHHHHHHHHHTTCEEEE
T ss_pred -Cc-----------------------CCHHHHhcCCCCCEEEECCCcHH-HHHHHHHHHHCCCcEEE
Confidence 11 22345554 5788888887643 34445566778887664
No 364
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=91.91 E-value=0.2 Score=55.76 Aligned_cols=94 Identities=12% Similarity=0.038 Sum_probs=59.5
Q ss_pred ccCeEEEEcCChH--HHHHHHHHHHhc--CCeEEEEeCCcccccCCCcCCCCCcchhcCCCCcHHHHHHHHHHhhCCCcE
Q 005071 363 SSRKCLLLGAGTL--GCQVARMLMAWG--VRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVA 438 (715)
Q Consensus 363 ~~~kVlIvGaGgL--Gs~VA~~La~~G--Vg~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~~KAeaaa~~L~~inP~v~ 438 (715)
+..||.|||+|+. |..++..|+..- .++|+|+|.|.= -+ .+....++.+.+ ...+
T Consensus 4 ~~~KIaVIGaGs~g~g~~la~~l~~~~~~~geV~L~Di~~e--------------~l-----e~~~~~~~~l~~--~~~~ 62 (450)
T 3fef_A 4 DQIKIAYIGGGSQGWARSLMSDLSIDERMSGTVALYDLDFE--------------AA-----QKNEVIGNHSGN--GRWR 62 (450)
T ss_dssp CCEEEEEETTTCSSHHHHHHHHHHHCSSCCEEEEEECSSHH--------------HH-----HHHHHHHTTSTT--SCEE
T ss_pred CCCEEEEECCChhHhHHHHHHHHHhccccCCeEEEEeCCHH--------------HH-----HHHHHHHHHHhc--cCCe
Confidence 4569999999997 688998888722 349999997430 00 011112222222 2233
Q ss_pred EEEEecccCCCCCCCCCccccccccchhhHHHhhccCCEEEEeC--CChHHHHHHHHHHHhcCC
Q 005071 439 AEGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLT--DTRESRWLPTLLCANTNK 500 (715)
Q Consensus 439 v~~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~t--Ds~esR~li~~~~~~~~k 500 (715)
+++ ..++++.++++|+||.+. ...+.|..=-++..++|.
T Consensus 63 I~~-----------------------TtD~~eAl~dADfVI~airvG~~~~~~~De~ip~k~G~ 103 (450)
T 3fef_A 63 YEA-----------------------VSTLKKALSAADIVIISILPGSLDDMEVDVHLPERCGI 103 (450)
T ss_dssp EEE-----------------------ESSHHHHHTTCSEEEECCCSSCHHHHHHHHHGGGGGTC
T ss_pred EEE-----------------------ECCHHHHhcCCCEEEeccccCCcccchhhhhhhhccCc
Confidence 332 234566789999999999 667777766666777766
No 365
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=91.88 E-value=0.46 Score=49.96 Aligned_cols=89 Identities=13% Similarity=0.144 Sum_probs=54.3
Q ss_pred CeEEEEcCChHHHHHHHHHH-H-hcCCeEEEEeCCcccccCCCcCCCCCcchhcCCCCcHHHHHHHHHHhhCCCcEEEEE
Q 005071 365 RKCLLLGAGTLGCQVARMLM-A-WGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEGV 442 (715)
Q Consensus 365 ~kVlIvGaGgLGs~VA~~La-~-~GVg~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~~KAeaaa~~L~~inP~v~v~~~ 442 (715)
.||.|||+|.+|...++.|. . .|+.-+.++|. ...|++.+++.. . +.+..+
T Consensus 3 ~rigiIG~G~~g~~~~~~l~~~~~~~~l~av~d~----------------------~~~~~~~~~~~~----g-~~~~~~ 55 (344)
T 3mz0_A 3 LRIGVIGTGAIGKEHINRITNKLSGAEIVAVTDV----------------------NQEAAQKVVEQY----Q-LNATVY 55 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTCSSEEEEEEECS----------------------SHHHHHHHHHHT----T-CCCEEE
T ss_pred EEEEEECccHHHHHHHHHHHhhCCCcEEEEEEcC----------------------CHHHHHHHHHHh----C-CCCeee
Confidence 48999999999999999998 4 34433345554 222444444332 1 111122
Q ss_pred ecccCCCCCCCCCccccccccchhhHHHhhcc--CCEEEEeCCChHHHHHHHHHHHhcCCeEEE
Q 005071 443 VMAIPMPGHPVPCQEEDSVLDDCRRLTDLILS--HDVIFLLTDTRESRWLPTLLCANTNKITIT 504 (715)
Q Consensus 443 ~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~--~DvV~~~tDs~esR~li~~~~~~~~kp~I~ 504 (715)
.+.++++++ .|+|+.|+-+ ....-+...|.+.||+++.
T Consensus 56 -----------------------~~~~~ll~~~~~D~V~i~tp~-~~h~~~~~~al~~Gk~vl~ 95 (344)
T 3mz0_A 56 -----------------------PNDDSLLADENVDAVLVTSWG-PAHESSVLKAIKAQKYVFC 95 (344)
T ss_dssp -----------------------SSHHHHHHCTTCCEEEECSCG-GGHHHHHHHHHHTTCEEEE
T ss_pred -----------------------CCHHHHhcCCCCCEEEECCCc-hhHHHHHHHHHHCCCcEEE
Confidence 234455554 8999999965 4444455667788887764
No 366
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=91.87 E-value=0.35 Score=50.68 Aligned_cols=88 Identities=13% Similarity=0.087 Sum_probs=62.6
Q ss_pred cCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeCCcccccCCCcCCCCCcchhcCCCCcHHHHHHHHHHhhCCCcEEEEEe
Q 005071 364 SRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEGVV 443 (715)
Q Consensus 364 ~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~~KAeaaa~~L~~inP~v~v~~~~ 443 (715)
..+|+|+|+|.+|..+++.|...|. ++++|.|. .+++ ++ + .++. .+.
T Consensus 115 ~~~viI~G~G~~g~~l~~~L~~~g~--v~vid~~~----------------------~~~~-~~----~--~~~~--~i~ 161 (336)
T 1lnq_A 115 SRHVVICGWSESTLECLRELRGSEV--FVLAEDEN----------------------VRKK-VL----R--SGAN--FVH 161 (336)
T ss_dssp -CEEEEESCCHHHHHHHTTGGGSCE--EEEESCGG----------------------GHHH-HH----H--TTCE--EEE
T ss_pred cCCEEEECCcHHHHHHHHHHHhCCc--EEEEeCCh----------------------hhhh-HH----h--CCcE--EEE
Confidence 5689999999999999999999987 88888642 1232 22 1 2333 333
Q ss_pred cccCCCCCCCCCccccccccchhhHHHh-hccCCEEEEeCCChHHHHHHHHHHHhcCC
Q 005071 444 MAIPMPGHPVPCQEEDSVLDDCRRLTDL-ILSHDVIFLLTDTRESRWLPTLLCANTNK 500 (715)
Q Consensus 444 ~~Ipmpgh~~~~~~~~~~~~~~~~l~~l-i~~~DvV~~~tDs~esR~li~~~~~~~~k 500 (715)
.+. .+.+.+.+. ++++|.|+.++++.+.-.++...+++.+.
T Consensus 162 gd~----------------~~~~~L~~a~i~~a~~vi~~~~~d~~n~~~~~~ar~~~~ 203 (336)
T 1lnq_A 162 GDP----------------TRVSDLEKANVRGARAVIVDLESDSETIHCILGIRKIDE 203 (336)
T ss_dssp SCT----------------TSHHHHHHTCSTTEEEEEECCSSHHHHHHHHHHHHTTCT
T ss_pred eCC----------------CCHHHHHhcChhhccEEEEcCCccHHHHHHHHHHHHHCC
Confidence 221 244555555 78999999999998888888888888765
No 367
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=91.87 E-value=0.42 Score=51.54 Aligned_cols=34 Identities=24% Similarity=0.468 Sum_probs=30.6
Q ss_pred ccCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 363 SSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 363 ~~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
.+.+|||+|+|++|..++..+...|.++++.+|.
T Consensus 213 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~ 246 (404)
T 3ip1_A 213 PGDNVVILGGGPIGLAAVAILKHAGASKVILSEP 246 (404)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECC
Confidence 4679999999999999999999999989988875
No 368
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=91.79 E-value=0.4 Score=48.56 Aligned_cols=35 Identities=17% Similarity=0.326 Sum_probs=30.1
Q ss_pred hccCeEEEEcC---ChHHHHHHHHHHHhcCCeEEEEeCC
Q 005071 362 LSSRKCLLLGA---GTLGCQVARMLMAWGVRKITLLDNG 397 (715)
Q Consensus 362 L~~~kVlIvGa---GgLGs~VA~~La~~GVg~ItLVD~D 397 (715)
+++++|+|.|+ ||+|..+|+.|++.|. ++.++|.+
T Consensus 4 l~~k~vlVTGas~~~gIG~~~a~~l~~~G~-~V~~~~r~ 41 (275)
T 2pd4_A 4 LKGKKGLIVGVANNKSIAYGIAQSCFNQGA-TLAFTYLN 41 (275)
T ss_dssp TTTCEEEEECCCSTTSHHHHHHHHHHTTTC-EEEEEESS
T ss_pred CCCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEeCC
Confidence 56789999998 6999999999999995 58887753
No 369
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=91.74 E-value=0.4 Score=48.48 Aligned_cols=35 Identities=23% Similarity=0.226 Sum_probs=28.3
Q ss_pred hccCeEEEEcC-ChHHHHHHHHHHHhcCCeEEEEeCC
Q 005071 362 LSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNG 397 (715)
Q Consensus 362 L~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD~D 397 (715)
+.+++|+|.|+ ||+|..+|+.|++.|. ++.++|.+
T Consensus 3 ~~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~ 38 (281)
T 3m1a_A 3 ESAKVWLVTGASSGFGRAIAEAAVAAGD-TVIGTARR 38 (281)
T ss_dssp -CCCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCC
Confidence 35678888875 8999999999999996 67777763
No 370
>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}
Probab=91.69 E-value=0.6 Score=49.05 Aligned_cols=86 Identities=15% Similarity=0.068 Sum_probs=54.6
Q ss_pred hccCeEEEEcC-ChHHHHHHHHHHHhcCCeEEEEeCCcccccCCCcCCCCCcchhcCCCCcHHHHHHHHHHhhCCCcEEE
Q 005071 362 LSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAE 440 (715)
Q Consensus 362 L~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~~KAeaaa~~L~~inP~v~v~ 440 (715)
+++++|+|.|+ ||+|..+|+.|++.|. ++.+.+.+... - ...+.+.+++.+....+ ++.
T Consensus 3 m~~k~vlVTGas~GIG~aia~~L~~~G~-~V~~~~r~~~~--------------r---~~~~~~~l~~~~~~~~~--~~~ 62 (324)
T 3u9l_A 3 MSKKIILITGASSGFGRLTAEALAGAGH-RVYASMRDIVG--------------R---NASNVEAIAGFARDNDV--DLR 62 (324)
T ss_dssp --CCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCTTT--------------T---THHHHHHHHHHHHHHTC--CEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEecCcccc--------------c---CHHHHHHHHHHHHhcCC--cEE
Confidence 45678899885 8999999999999996 45555543221 1 23456666666666544 455
Q ss_pred EEecccCCCCCCCCCccccccccchhhHHHhhc-------cCCEEEEeCC
Q 005071 441 GVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLIL-------SHDVIFLLTD 483 (715)
Q Consensus 441 ~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~-------~~DvV~~~tD 483 (715)
.+..++ .+.+.+.++++ ..|+||.+..
T Consensus 63 ~~~~Dv----------------td~~~v~~~~~~~~~~~g~iD~lVnnAG 96 (324)
T 3u9l_A 63 TLELDV----------------QSQVSVDRAIDQIIGEDGRIDVLIHNAG 96 (324)
T ss_dssp EEECCT----------------TCHHHHHHHHHHHHHHHSCCSEEEECCC
T ss_pred EEEeec----------------CCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 555554 23334444443 7899999875
No 371
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=91.69 E-value=0.32 Score=51.18 Aligned_cols=33 Identities=33% Similarity=0.522 Sum_probs=28.8
Q ss_pred CeEEEEcCChHHHHHHHHHHHhcC-CeEEEEeCC
Q 005071 365 RKCLLLGAGTLGCQVARMLMAWGV-RKITLLDNG 397 (715)
Q Consensus 365 ~kVlIvGaGgLGs~VA~~La~~GV-g~ItLVD~D 397 (715)
.||.|+|+|.+|..++..|+..|. ++|.|+|-+
T Consensus 1 ~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~ 34 (310)
T 2xxj_A 1 MKVGIVGSGMVGSATAYALALLGVAREVVLVDLD 34 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 489999999999999999998874 679998863
No 372
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=91.68 E-value=0.65 Score=48.49 Aligned_cols=32 Identities=28% Similarity=0.368 Sum_probs=25.2
Q ss_pred CeEEEEcCChHHHHHHHHHHHh-cCCeEEEEeC
Q 005071 365 RKCLLLGAGTLGCQVARMLMAW-GVRKITLLDN 396 (715)
Q Consensus 365 ~kVlIvGaGgLGs~VA~~La~~-GVg~ItLVD~ 396 (715)
.||.|||+|.+|...++.|.+. |+.-+.++|.
T Consensus 4 ~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~ 36 (331)
T 4hkt_A 4 VRFGLLGAGRIGKVHAKAVSGNADARLVAVADA 36 (331)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECS
T ss_pred eEEEEECCCHHHHHHHHHHhhCCCcEEEEEECC
Confidence 4899999999999999999986 4443445555
No 373
>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}
Probab=91.67 E-value=0.75 Score=51.72 Aligned_cols=84 Identities=19% Similarity=0.263 Sum_probs=59.4
Q ss_pred ccCeEEEEc-CChHHHHHHHHHHHhcCCeEEEEeCCcccccCCCcCCCCCcchhcCCCCcHHHHHHHHHHhhCCCcEEEE
Q 005071 363 SSRKCLLLG-AGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEG 441 (715)
Q Consensus 363 ~~~kVlIvG-aGgLGs~VA~~La~~GVg~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~~KAeaaa~~L~~inP~v~v~~ 441 (715)
.+++|+|.| .||||..+++.|+..|..++.+++...- ..++++.+.+.|... +.++..
T Consensus 258 ~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~-------------------~~~~~~~l~~~l~~~--g~~v~~ 316 (511)
T 2z5l_A 258 PSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGP-------------------EAPGAAELAEELRGH--GCEVVH 316 (511)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGG-------------------GSTTHHHHHHHHHTT--TCEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCc-------------------ccHHHHHHHHHHHhc--CCEEEE
Confidence 356788886 7999999999999999999999876321 112344555556553 456777
Q ss_pred EecccCCCCCCCCCccccccccchhhHHHhhcc--CCEEEEeCC
Q 005071 442 VVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILS--HDVIFLLTD 483 (715)
Q Consensus 442 ~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~--~DvV~~~tD 483 (715)
+..++ .+.+.+.+++++ .|+||.+..
T Consensus 317 ~~~Dv----------------td~~~v~~~~~~~~ld~VVh~AG 344 (511)
T 2z5l_A 317 AACDV----------------AERDALAALVTAYPPNAVFHTAG 344 (511)
T ss_dssp EECCS----------------SCHHHHHHHHHHSCCSEEEECCC
T ss_pred EEeCC----------------CCHHHHHHHHhcCCCcEEEECCc
Confidence 76655 355667777765 899998764
No 374
>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2
Probab=91.62 E-value=0.83 Score=52.69 Aligned_cols=35 Identities=26% Similarity=0.378 Sum_probs=28.1
Q ss_pred hhccCeEEEEcC-ChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 361 kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
.+++++|||.|+ |++|+.+++.|++.|. +++++|.
T Consensus 8 ~~~~~~ilVTGatG~IG~~l~~~L~~~G~-~V~~~~r 43 (699)
T 1z45_A 8 ESTSKIVLVTGGAGYIGSHTVVELIENGY-DCVVADN 43 (699)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEEC
T ss_pred ccCCCEEEEECCCCHHHHHHHHHHHHCcC-EEEEEEC
Confidence 356789999984 9999999999999994 6777775
No 375
>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2
Probab=91.58 E-value=0.55 Score=49.26 Aligned_cols=35 Identities=29% Similarity=0.252 Sum_probs=27.9
Q ss_pred HhhccCeEEEEc-CChHHHHHHHHHHHhcCCeEEEEe
Q 005071 360 DILSSRKCLLLG-AGTLGCQVARMLMAWGVRKITLLD 395 (715)
Q Consensus 360 ~kL~~~kVlIvG-aGgLGs~VA~~La~~GVg~ItLVD 395 (715)
..+++++|+|.| .||+|..+|+.|++.|. +++++|
T Consensus 42 ~~l~~k~~lVTGas~GIG~aia~~La~~G~-~Vv~~~ 77 (328)
T 2qhx_A 42 TAPTVPVALVTGAAKRLGRSIAEGLHAEGY-AVCLHY 77 (328)
T ss_dssp ---CCCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEE
T ss_pred cccCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEc
Confidence 347788899997 57999999999999996 577776
No 376
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=91.57 E-value=0.71 Score=49.05 Aligned_cols=92 Identities=22% Similarity=0.249 Sum_probs=56.9
Q ss_pred hccCeEEEEcCChHHHHHHHHHH-H-hcCCeEEEEeCCcccccCCCcCCCCCcchhcCCCCcHHHHHHHHHHhhCCCcEE
Q 005071 362 LSSRKCLLLGAGTLGCQVARMLM-A-WGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAA 439 (715)
Q Consensus 362 L~~~kVlIvGaGgLGs~VA~~La-~-~GVg~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~~KAeaaa~~L~~inP~v~v 439 (715)
.+..||.|||+|.+|...++.|. . -|+.-+.++|. ...|++.+++... +.+
T Consensus 21 m~~~rvgiIG~G~~g~~~~~~l~~~~~~~~lvav~d~----------------------~~~~~~~~a~~~g-----~~~ 73 (357)
T 3ec7_A 21 GMTLKAGIVGIGMIGSDHLRRLANTVSGVEVVAVCDI----------------------VAGRAQAALDKYA-----IEA 73 (357)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTCTTEEEEEEECS----------------------STTHHHHHHHHHT-----CCC
T ss_pred CCeeeEEEECCcHHHHHHHHHHHhhCCCcEEEEEEeC----------------------CHHHHHHHHHHhC-----CCC
Confidence 34568999999999999999998 4 35444445554 2335555554432 111
Q ss_pred EEEecccCCCCCCCCCccccccccchhhHHHhhc--cCCEEEEeCCChHHHHHHHHHHHhcCCeEEE
Q 005071 440 EGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLIL--SHDVIFLLTDTRESRWLPTLLCANTNKITIT 504 (715)
Q Consensus 440 ~~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~--~~DvV~~~tDs~esR~li~~~~~~~~kp~I~ 504 (715)
..+ .+.+++++ +.|+|+.||-+. ...-+...|.+.||+++.
T Consensus 74 ~~~-----------------------~~~~~ll~~~~~D~V~i~tp~~-~h~~~~~~al~aGk~Vl~ 116 (357)
T 3ec7_A 74 KDY-----------------------NDYHDLINDKDVEVVIITASNE-AHADVAVAALNANKYVFC 116 (357)
T ss_dssp EEE-----------------------SSHHHHHHCTTCCEEEECSCGG-GHHHHHHHHHHTTCEEEE
T ss_pred eee-----------------------CCHHHHhcCCCCCEEEEcCCcH-HHHHHHHHHHHCCCCEEe
Confidence 122 23345554 588999888653 444455667778887764
No 377
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=91.56 E-value=0.81 Score=45.61 Aligned_cols=32 Identities=28% Similarity=0.318 Sum_probs=28.1
Q ss_pred eEEEEcCChHHHHHHHHHHHhcCCeEEEEeCC
Q 005071 366 KCLLLGAGTLGCQVARMLMAWGVRKITLLDNG 397 (715)
Q Consensus 366 kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~D 397 (715)
||.|||+|.+|..++++|...|+.-..++|.+
T Consensus 2 ~vgiIG~G~mG~~~~~~l~~~g~~lv~v~d~~ 33 (236)
T 2dc1_A 2 LVGLIGYGAIGKFLAEWLERNGFEIAAILDVR 33 (236)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHhcCCCEEEEEEecC
Confidence 79999999999999999998887555788875
No 378
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=91.54 E-value=0.53 Score=53.00 Aligned_cols=28 Identities=18% Similarity=0.205 Sum_probs=26.5
Q ss_pred HHhhcc-CeEEEEcCChHHHHHHHHHHHh
Q 005071 359 LDILSS-RKCLLLGAGTLGCQVARMLMAW 386 (715)
Q Consensus 359 q~kL~~-~kVlIvGaGgLGs~VA~~La~~ 386 (715)
.+.|++ +||.|||+|..|..+|++|..+
T Consensus 48 ~~~L~GiKkIgIIGlGsMG~AmA~nLr~s 76 (525)
T 3fr7_A 48 PEAFKGIKQIGVIGWGSQGPAQAQNLRDS 76 (525)
T ss_dssp HHHTTTCSEEEEECCTTHHHHHHHHHHHH
T ss_pred hHHhcCCCEEEEEeEhHHHHHHHHHHHhc
Confidence 578899 9999999999999999999999
No 379
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=91.53 E-value=0.48 Score=47.20 Aligned_cols=34 Identities=21% Similarity=0.353 Sum_probs=28.6
Q ss_pred hccCeEEEEcC-ChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 362 LSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 362 L~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
+++++|+|.|+ ||+|..+|+.|++.|. +++++|.
T Consensus 3 l~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r 37 (245)
T 1uls_A 3 LKDKAVLITGAAHGIGRATLELFAKEGA-RLVACDI 37 (245)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeC
Confidence 56789999985 8999999999999995 5777665
No 380
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=91.44 E-value=0.52 Score=47.55 Aligned_cols=34 Identities=24% Similarity=0.483 Sum_probs=26.4
Q ss_pred hhccCeEEEEcC-ChHHHHHHHHHHHhcCCeEEEEe
Q 005071 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLD 395 (715)
Q Consensus 361 kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD 395 (715)
.+++++|+|.|+ ||+|..+|+.|++.|. ++.++|
T Consensus 22 ~~~~k~vlITGas~gIG~~~a~~l~~~G~-~v~~~~ 56 (269)
T 3gk3_A 22 MQAKRVAFVTGGMGGLGAAISRRLHDAGM-AVAVSH 56 (269)
T ss_dssp --CCCEEEETTTTSHHHHHHHHHHHTTTC-EEEEEE
T ss_pred hhcCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEc
Confidence 356778888885 8999999999999996 466655
No 381
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=91.43 E-value=0.063 Score=59.93 Aligned_cols=33 Identities=21% Similarity=0.344 Sum_probs=30.2
Q ss_pred CeEEEEcCChHHHHHHHHHHHhcCCeEEEEeCCc
Q 005071 365 RKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGR 398 (715)
Q Consensus 365 ~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~D~ 398 (715)
+||.|||+|..|+.+|..|+..|+ .++++|.+.
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~aG~-~V~l~D~~~ 87 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLAGI-ETFLVVRNE 87 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCC-eEEEEECcH
Confidence 689999999999999999999996 899988754
No 382
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=91.38 E-value=0.18 Score=52.96 Aligned_cols=34 Identities=29% Similarity=0.428 Sum_probs=30.2
Q ss_pred cCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeCCc
Q 005071 364 SRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGR 398 (715)
Q Consensus 364 ~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~D~ 398 (715)
+.||+|||+|-.|+.+|..|++.|+ +++|+|.+.
T Consensus 1 sm~V~IVGaGpaGl~~A~~L~~~G~-~v~v~Er~~ 34 (412)
T 4hb9_A 1 SMHVGIIGAGIGGTCLAHGLRKHGI-KVTIYERNS 34 (412)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSC
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCC-CEEEEecCC
Confidence 4689999999999999999999998 588998653
No 383
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=91.37 E-value=0.094 Score=56.00 Aligned_cols=92 Identities=23% Similarity=0.258 Sum_probs=61.3
Q ss_pred HhhccCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeCCcccccCCCcCCCCCcchhcCCCCcHHHHHHHHHHhhCCCcEE
Q 005071 360 DILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAA 439 (715)
Q Consensus 360 ~kL~~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~~KAeaaa~~L~~inP~v~v 439 (715)
..|.+++|.|||.|.+|..+|+.+...|+.- ..+|. +..++. .+. ++
T Consensus 137 ~~l~g~tvGIiG~G~IG~~va~~~~~fg~~v-~~~d~-------------~~~~~~---------------~~~--~~-- 183 (334)
T 3kb6_A 137 RELNRLTLGVIGTGRIGSRVAMYGLAFGMKV-LCYDV-------------VKREDL---------------KEK--GC-- 183 (334)
T ss_dssp CCGGGSEEEEECCSHHHHHHHHHHHHTTCEE-EEECS-------------SCCHHH---------------HHT--TC--
T ss_pred ceecCcEEEEECcchHHHHHHHhhcccCcee-eecCC-------------ccchhh---------------hhc--Cc--
Confidence 5689999999999999999999999999754 44453 111111 010 11
Q ss_pred EEEecccCCCCCCCCCccccccccchhhHHHhhccCCEEEEeC-CChHHHHHHHHHHHh---cCCeEEEeeeC
Q 005071 440 EGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLT-DTRESRWLPTLLCAN---TNKITITAALG 508 (715)
Q Consensus 440 ~~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~t-Ds~esR~li~~~~~~---~~kp~I~aalG 508 (715)
....++++++++|+|+.++ -+.++|.+++.-..+ .+..+||.+-|
T Consensus 184 ------------------------~~~~l~ell~~sDivslh~Plt~~T~~li~~~~l~~mk~~a~lIN~aRG 232 (334)
T 3kb6_A 184 ------------------------VYTSLDELLKESDVISLHVPYTKETHHMINEERISLMKDGVYLINTARG 232 (334)
T ss_dssp ------------------------EECCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCTTEEEEECSCG
T ss_pred ------------------------eecCHHHHHhhCCEEEEcCCCChhhccCcCHHHHhhcCCCeEEEecCcc
Confidence 1123567899999999876 466788887765443 34457777543
No 384
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=91.32 E-value=0.69 Score=49.77 Aligned_cols=30 Identities=20% Similarity=0.308 Sum_probs=26.2
Q ss_pred CeEEEEcCChHHHHHHHHHHH-hcCCeEEEEe
Q 005071 365 RKCLLLGAGTLGCQVARMLMA-WGVRKITLLD 395 (715)
Q Consensus 365 ~kVlIvGaGgLGs~VA~~La~-~GVg~ItLVD 395 (715)
.||+|||+|.+|+.+|..|++ .|. +++++|
T Consensus 3 mkI~ViGaG~~G~~~a~~La~~~G~-~V~~~~ 33 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAASRDGV-EVRVLT 33 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSTTE-EEEEEC
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCC-EEEEEe
Confidence 379999999999999999988 474 788887
No 385
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=91.30 E-value=0.52 Score=46.70 Aligned_cols=36 Identities=25% Similarity=0.469 Sum_probs=30.5
Q ss_pred HhhccCeEEEEc-CChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 360 DILSSRKCLLLG-AGTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 360 ~kL~~~kVlIvG-aGgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
..+++++|+|.| .||+|..+|+.|++.|. ++.++|.
T Consensus 10 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r 46 (249)
T 3f9i_A 10 IDLTGKTSLITGASSGIGSAIARLLHKLGS-KVIISGS 46 (249)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred ccCCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcC
Confidence 467889999998 57999999999999995 5777765
No 386
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=91.27 E-value=0.48 Score=51.76 Aligned_cols=112 Identities=17% Similarity=0.225 Sum_probs=68.8
Q ss_pred CeEEEEcCChHHHHHHHHHHHhcCC-------eEEEEeCCcccccCCCcCCCCCcchhcCCCCcHHHHHHHHHHhhCCCc
Q 005071 365 RKCLLLGAGTLGCQVARMLMAWGVR-------KITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAV 437 (715)
Q Consensus 365 ~kVlIvGaGgLGs~VA~~La~~GVg-------~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~~KAeaaa~~L~~inP~v 437 (715)
.||.|+|+|.=|+.+|..|++.|-+ .+++.-.+. ++. ++. .++.+++...+.
T Consensus 35 ~KI~ViGaGsWGTALA~~la~ng~~~~~~~~~~V~lw~r~~---------------e~~--~~~----~~e~in~~~~N~ 93 (391)
T 4fgw_A 35 FKVTVIGSGNWGTTIAKVVAENCKGYPEVFAPIVQMWVFEE---------------EIN--GEK----LTEIINTRHQNV 93 (391)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTTEEEEEEEECCCC---------------BSS--SCB----HHHHHTTTCCBT
T ss_pred CeEEEECcCHHHHHHHHHHHHcCCCccccCCceEEEEEcch---------------Hhh--hHH----HHHHHHhcCcCc
Confidence 4899999999999999999998742 356643321 110 111 112222111000
Q ss_pred EEEEEecccCCCCCCCCCccccccccchhhHHHhhccCCEEEEeCCChHHHHHHHHHHH--hcCCeEEEeeeCCc
Q 005071 438 AAEGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTRESRWLPTLLCA--NTNKITITAALGFD 510 (715)
Q Consensus 438 ~v~~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~esR~li~~~~~--~~~kp~I~aalG~~ 510 (715)
+ =.||..++++ ..-..++.+.++++|+||.++=+...|+.+.++.. ..++++|+++-|++
T Consensus 94 ~--------YLpgv~Lp~~-----i~~t~dl~~al~~ad~ii~avPs~~~r~~l~~l~~~~~~~~~iv~~~KGie 155 (391)
T 4fgw_A 94 K--------YLPGITLPDN-----LVANPDLIDSVKDVDIIVFNIPHQFLPRICSQLKGHVDSHVRAISCLKGFE 155 (391)
T ss_dssp T--------TBTTCCCCSS-----EEEESCHHHHHTTCSEEEECSCGGGHHHHHHHHTTTSCTTCEEEECCCSCE
T ss_pred c--------cCCCCcCCCC-----cEEeCCHHHHHhcCCEEEEECChhhhHHHHHHhccccCCCceeEEeccccc
Confidence 0 0123222211 11234667788999999999999999999888754 34678898877764
No 387
>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0
Probab=91.25 E-value=0.36 Score=49.33 Aligned_cols=29 Identities=24% Similarity=0.427 Sum_probs=23.5
Q ss_pred CeEEEEcC-ChHHHHHHHHHHHhcCCeEEEEe
Q 005071 365 RKCLLLGA-GTLGCQVARMLMAWGVRKITLLD 395 (715)
Q Consensus 365 ~kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD 395 (715)
++|||.|+ |++|..+++.|+..| +++.++
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g--~~v~~~ 31 (313)
T 3ehe_A 2 SLIVVTGGAGFIGSHVVDKLSESN--EIVVID 31 (313)
T ss_dssp -CEEEETTTSHHHHHHHHHHTTTS--CEEEEC
T ss_pred CEEEEECCCchHHHHHHHHHHhCC--CEEEEE
Confidence 47999996 999999999999999 444443
No 388
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=91.25 E-value=0.63 Score=49.19 Aligned_cols=34 Identities=26% Similarity=0.384 Sum_probs=30.5
Q ss_pred ccCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 363 SSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 363 ~~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
.+.+|+|+|+|++|..++..+..+|.++++.+|.
T Consensus 171 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~ 204 (356)
T 1pl8_A 171 LGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDL 204 (356)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEES
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECC
Confidence 3679999999999999999988999989998875
No 389
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=91.25 E-value=0.84 Score=48.25 Aligned_cols=33 Identities=27% Similarity=0.338 Sum_probs=28.5
Q ss_pred CeEEEEc-CChHHHHHHHHHHHhcC-CeEEEEeCC
Q 005071 365 RKCLLLG-AGTLGCQVARMLMAWGV-RKITLLDNG 397 (715)
Q Consensus 365 ~kVlIvG-aGgLGs~VA~~La~~GV-g~ItLVD~D 397 (715)
.||+|+| +|.+|..++..|+..|. .+|+++|-+
T Consensus 9 mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~ 43 (326)
T 1smk_A 9 FKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVV 43 (326)
T ss_dssp EEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESS
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 5899999 79999999999998774 579999864
No 390
>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*
Probab=91.24 E-value=0.85 Score=50.82 Aligned_cols=84 Identities=20% Similarity=0.277 Sum_probs=57.7
Q ss_pred ccCeEEEEc-CChHHHHHHHHHHHhcCCeEEEEeCCcccccCCCcCCCCCcchhcCCCCcHHHHHHHHHHhhCCCcEEEE
Q 005071 363 SSRKCLLLG-AGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEG 441 (715)
Q Consensus 363 ~~~kVlIvG-aGgLGs~VA~~La~~GVg~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~~KAeaaa~~L~~inP~v~v~~ 441 (715)
.+.+|+|.| .||||..+|+.|++.|..++.+++...- ..++++.+.+.|... +.++..
T Consensus 225 ~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~-------------------~~~~~~~l~~~l~~~--g~~v~~ 283 (486)
T 2fr1_A 225 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGP-------------------DADGAGELVAELEAL--GARTTV 283 (486)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGG-------------------GSTTHHHHHHHHHHT--TCEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCC-------------------CcHHHHHHHHHHHhc--CCEEEE
Confidence 356788886 7999999999999999999999876421 122444555566654 345666
Q ss_pred EecccCCCCCCCCCccccccccchhhHHHhhccC------CEEEEeCC
Q 005071 442 VVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSH------DVIFLLTD 483 (715)
Q Consensus 442 ~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~------DvV~~~tD 483 (715)
+..++ .+.+.+..+++.. |+||.+..
T Consensus 284 ~~~Dv----------------~d~~~v~~~~~~i~~~g~ld~VIh~AG 315 (486)
T 2fr1_A 284 AACDV----------------TDRESVRELLGGIGDDVPLSAVFHAAA 315 (486)
T ss_dssp EECCT----------------TCHHHHHHHHHTSCTTSCEEEEEECCC
T ss_pred EEeCC----------------CCHHHHHHHHHHHHhcCCCcEEEECCc
Confidence 66554 2455666666654 88988764
No 391
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=91.24 E-value=0.3 Score=52.12 Aligned_cols=34 Identities=18% Similarity=0.345 Sum_probs=30.8
Q ss_pred ccCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 363 SSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 363 ~~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
.+.+|||+|+|++|..++..+..+|.++++.+|.
T Consensus 182 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~ 215 (370)
T 4ej6_A 182 AGSTVAILGGGVIGLLTVQLARLAGATTVILSTR 215 (370)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECC
Confidence 4679999999999999999999999999988875
No 392
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=91.21 E-value=0.61 Score=48.39 Aligned_cols=42 Identities=12% Similarity=0.110 Sum_probs=32.5
Q ss_pred hHHHhhccCCEEEEeCCChHHHHHHHHHHHhcCCeEEEeeeCC
Q 005071 467 RLTDLILSHDVIFLLTDTRESRWLPTLLCANTNKITITAALGF 509 (715)
Q Consensus 467 ~l~~li~~~DvV~~~tDs~esR~li~~~~~~~~kp~I~aalG~ 509 (715)
+++++++++|+|||+|. +++-.-.-..|.++|+|+|.+..|+
T Consensus 66 dl~~ll~~~DVVIDfT~-p~a~~~~~~~al~~G~~vVigTTG~ 107 (272)
T 4f3y_A 66 DIERVCAEADYLIDFTL-PEGTLVHLDAALRHDVKLVIGTTGF 107 (272)
T ss_dssp CHHHHHHHCSEEEECSC-HHHHHHHHHHHHHHTCEEEECCCCC
T ss_pred CHHHHhcCCCEEEEcCC-HHHHHHHHHHHHHcCCCEEEECCCC
Confidence 45666778999999994 5555556678899999999876665
No 393
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=91.21 E-value=0.52 Score=49.24 Aligned_cols=34 Identities=26% Similarity=0.569 Sum_probs=31.4
Q ss_pred ccCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 363 SSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 363 ~~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
.+.+|+|.|+|++|..++..+..+|.+.++.+|.
T Consensus 160 ~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~ 193 (346)
T 4a2c_A 160 ENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDI 193 (346)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEES
T ss_pred CCCEEEEECCCCcchHHHHHHHHcCCcEEEEEec
Confidence 4679999999999999999999999999999886
No 394
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=91.18 E-value=0.58 Score=48.65 Aligned_cols=31 Identities=19% Similarity=0.291 Sum_probs=25.4
Q ss_pred eEEEEcCChHHHHH-HHHHHHhcCCeEEEEeC
Q 005071 366 KCLLLGAGTLGCQV-ARMLMAWGVRKITLLDN 396 (715)
Q Consensus 366 kVlIvGaGgLGs~V-A~~La~~GVg~ItLVD~ 396 (715)
||+|||+|.+|... ++.|...|+.-+.++|.
T Consensus 2 ~vgiiG~G~~g~~~~~~~l~~~~~~~vav~d~ 33 (332)
T 2glx_A 2 RWGLIGASTIAREWVIGAIRATGGEVVSMMST 33 (332)
T ss_dssp EEEEESCCHHHHHTHHHHHHHTTCEEEEEECS
T ss_pred eEEEEcccHHHHHhhhHHhhcCCCeEEEEECC
Confidence 79999999999997 88888866655557675
No 395
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=91.16 E-value=0.35 Score=51.10 Aligned_cols=33 Identities=12% Similarity=0.125 Sum_probs=25.8
Q ss_pred cCeEEEEcCChHHHHHHHHHHHh-cCCeEEEEeC
Q 005071 364 SRKCLLLGAGTLGCQVARMLMAW-GVRKITLLDN 396 (715)
Q Consensus 364 ~~kVlIvGaGgLGs~VA~~La~~-GVg~ItLVD~ 396 (715)
..||.|||+|.+|...++.|.+. |+.-+.++|.
T Consensus 5 ~~~vgiiG~G~~g~~~~~~l~~~~~~~lvav~d~ 38 (354)
T 3db2_A 5 PVGVAAIGLGRWAYVMADAYTKSEKLKLVTCYSR 38 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTCSSEEEEEEECS
T ss_pred cceEEEEccCHHHHHHHHHHHhCCCcEEEEEECC
Confidence 35899999999999999999877 5444445554
No 396
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=90.97 E-value=0.5 Score=47.79 Aligned_cols=36 Identities=25% Similarity=0.319 Sum_probs=29.1
Q ss_pred HhhccCeEEEEcC-ChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 360 DILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 360 ~kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
.+|++++|+|.|+ ||+|..+|+.|++.|. ++.++|.
T Consensus 14 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~~ 50 (270)
T 3is3_A 14 GRLDGKVALVTGSGRGIGAAVAVHLGRLGA-KVVVNYA 50 (270)
T ss_dssp TCCTTCEEEESCTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCcCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcC
Confidence 3578899999985 6999999999999996 5555443
No 397
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=90.94 E-value=0.39 Score=49.77 Aligned_cols=36 Identities=19% Similarity=0.393 Sum_probs=31.5
Q ss_pred HhhccCeEEEEcC-ChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 360 DILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 360 ~kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
+||+++.++|-|+ +|+|-.+|+.|++.|. ++.++|.
T Consensus 25 ~rL~gKvalVTGas~GIG~aiA~~la~~Ga-~V~i~~r 61 (273)
T 4fgs_A 25 QRLNAKIAVITGATSGIGLAAAKRFVAEGA-RVFITGR 61 (273)
T ss_dssp CTTTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred chhCCCEEEEeCcCCHHHHHHHHHHHHCCC-EEEEEEC
Confidence 4799999999985 6899999999999997 6788775
No 398
>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}
Probab=90.90 E-value=0.67 Score=47.62 Aligned_cols=35 Identities=23% Similarity=0.324 Sum_probs=28.5
Q ss_pred ccCeEEEEcC-ChHHHHHHHHHHHhcC-CeEEEEeCC
Q 005071 363 SSRKCLLLGA-GTLGCQVARMLMAWGV-RKITLLDNG 397 (715)
Q Consensus 363 ~~~kVlIvGa-GgLGs~VA~~La~~GV-g~ItLVD~D 397 (715)
++.||||.|+ |++|+.+++.|+..|- -+++.+|..
T Consensus 2 ~~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~ 38 (336)
T 2hun_A 2 HSMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKL 38 (336)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECC
T ss_pred CCCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecC
Confidence 3468999995 9999999999999984 478887764
No 399
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=90.80 E-value=0.35 Score=49.59 Aligned_cols=35 Identities=34% Similarity=0.396 Sum_probs=28.8
Q ss_pred hhccCeEEEEc-CChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 361 ILSSRKCLLLG-AGTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 361 kL~~~kVlIvG-aGgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
.|+++.++|-| .+|+|..+|+.|++.|. ++.+.|.
T Consensus 6 ~L~gKvalVTGas~GIG~aia~~la~~Ga-~Vvi~~~ 41 (255)
T 4g81_D 6 DLTGKTALVTGSARGLGFAYAEGLAAAGA-RVILNDI 41 (255)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEECCS
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEEC
Confidence 36788888886 57999999999999996 5777654
No 400
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=90.80 E-value=2 Score=45.27 Aligned_cols=98 Identities=14% Similarity=0.180 Sum_probs=59.5
Q ss_pred ccCeEEEEcC-ChHHHHHHHHHHHhcCCeEEEEeCCcccccCCCcCCCCCcchhcCCCCcHHHHHHHHHHhhCCCcEEEE
Q 005071 363 SSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEG 441 (715)
Q Consensus 363 ~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~~KAeaaa~~L~~inP~v~v~~ 441 (715)
..++|+|.|+ |.+|..+++.|+..|. +++.++.+. .+.++ +.+.. .+. ++.
T Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~--------------------~~~~~----~~l~~-~~~--v~~ 55 (352)
T 1xgk_A 4 QKKTIAVVGATGRQGASLIRVAAAVGH-HVRAQVHSL--------------------KGLIA----EELQA-IPN--VTL 55 (352)
T ss_dssp CCCCEEEESTTSHHHHHHHHHHHHTTC-CEEEEESCS--------------------CSHHH----HHHHT-STT--EEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCC-EEEEEECCC--------------------ChhhH----HHHhh-cCC--cEE
Confidence 3578999996 9999999999999984 566665421 11111 22222 133 334
Q ss_pred Eecc-cCCCCCCCCCccccccccchhhHHHhhccCCEEEEeCCCh------HHHHHHHHHHHhcC--CeEEEe
Q 005071 442 VVMA-IPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTR------ESRWLPTLLCANTN--KITITA 505 (715)
Q Consensus 442 ~~~~-Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~------esR~li~~~~~~~~--kp~I~a 505 (715)
+..+ + .+.+.+.++++++|+||.++... ..+. +-++|.+.+ +-+|+.
T Consensus 56 v~~D~l----------------~d~~~l~~~~~~~d~Vi~~a~~~~~~~~~~~~~-l~~aa~~~g~v~~~V~~ 111 (352)
T 1xgk_A 56 FQGPLL----------------NNVPLMDTLFEGAHLAFINTTSQAGDEIAIGKD-LADAAKRAGTIQHYIYS 111 (352)
T ss_dssp EESCCT----------------TCHHHHHHHHTTCSEEEECCCSTTSCHHHHHHH-HHHHHHHHSCCSEEEEE
T ss_pred EECCcc----------------CCHHHHHHHHhcCCEEEEcCCCCCcHHHHHHHH-HHHHHHHcCCccEEEEe
Confidence 4433 3 24566778889999999766432 3333 334555666 356654
No 401
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=90.79 E-value=0.74 Score=45.68 Aligned_cols=34 Identities=21% Similarity=0.293 Sum_probs=27.6
Q ss_pred hccCeEEEEc-CChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 362 LSSRKCLLLG-AGTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 362 L~~~kVlIvG-aGgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
|++++|+|.| .||+|..+|+.|++.|. ++++++.
T Consensus 2 l~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r 36 (246)
T 2uvd_A 2 LKGKVALVTGASRGIGRAIAIDLAKQGA-NVVVNYA 36 (246)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence 4678889987 57999999999999996 5666554
No 402
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=90.73 E-value=0.78 Score=51.16 Aligned_cols=35 Identities=23% Similarity=0.368 Sum_probs=31.1
Q ss_pred ccCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeCCc
Q 005071 363 SSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGR 398 (715)
Q Consensus 363 ~~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~D~ 398 (715)
.+.||.|||+|.+|+.+|..|+..|. +++++|.+.
T Consensus 7 ~~~~I~VIG~G~vG~~lA~~la~~G~-~V~~~d~~~ 41 (478)
T 2y0c_A 7 GSMNLTIIGSGSVGLVTGACLADIGH-DVFCLDVDQ 41 (478)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCH
T ss_pred CCceEEEECcCHHHHHHHHHHHhCCC-EEEEEECCH
Confidence 35799999999999999999999996 699998764
No 403
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=90.71 E-value=0.22 Score=51.49 Aligned_cols=32 Identities=25% Similarity=0.536 Sum_probs=28.9
Q ss_pred CeEEEEcCChHHHHHHHHHHHhcCCeEEEEeCC
Q 005071 365 RKCLLLGAGTLGCQVARMLMAWGVRKITLLDNG 397 (715)
Q Consensus 365 ~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~D 397 (715)
+||.|||+|.+|+.+|..|+..|. +++++|.+
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G~-~V~~~d~~ 47 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATGH-TVVLVDQT 47 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC-eEEEEECC
Confidence 579999999999999999999996 78898864
No 404
>3nv9_A Malic enzyme; rossmann fold, oxidoreductase; 2.25A {Entamoeba histolytica}
Probab=90.71 E-value=0.18 Score=56.01 Aligned_cols=40 Identities=20% Similarity=0.436 Sum_probs=37.0
Q ss_pred HhhccCeEEEEcCChHHHHHHHHHHHhcC--CeEEEEeCCcc
Q 005071 360 DILSSRKCLLLGAGTLGCQVARMLMAWGV--RKITLLDNGRV 399 (715)
Q Consensus 360 ~kL~~~kVlIvGaGgLGs~VA~~La~~GV--g~ItLVD~D~V 399 (715)
++|+..||++.|+|+.|..+|+.|+..|+ ++|.++|..=+
T Consensus 215 k~l~d~riV~~GAGaAGigia~ll~~~G~~~~~i~l~D~~Gl 256 (487)
T 3nv9_A 215 KDIHECRMVFIGAGSSNTTCLRLIVTAGADPKKIVMFDSKGS 256 (487)
T ss_dssp CCGGGCCEEEECCSHHHHHHHHHHHHTTCCGGGEEEEETTEE
T ss_pred CChhhcEEEEECCCHHHHHHHHHHHHcCCCcccEEEEecccc
Confidence 57899999999999999999999999999 89999998543
No 405
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=90.60 E-value=0.52 Score=46.11 Aligned_cols=33 Identities=27% Similarity=0.436 Sum_probs=27.2
Q ss_pred ccCeEEEEc-CChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 363 SSRKCLLLG-AGTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 363 ~~~kVlIvG-aGgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
.+++|+|.| .|++|..+++.|++.|. +++++|.
T Consensus 4 ~~k~vlVtGasggiG~~~a~~l~~~G~-~V~~~~r 37 (234)
T 2ehd_A 4 MKGAVLITGASRGIGEATARLLHAKGY-RVGLMAR 37 (234)
T ss_dssp CCCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEEC
Confidence 356788886 68999999999999996 5777765
No 406
>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*
Probab=90.59 E-value=2.7 Score=43.17 Aligned_cols=32 Identities=34% Similarity=0.551 Sum_probs=26.8
Q ss_pred eEEEEc-CChHHHHHHHHHHHh---cC--CeEEEEeCC
Q 005071 366 KCLLLG-AGTLGCQVARMLMAW---GV--RKITLLDNG 397 (715)
Q Consensus 366 kVlIvG-aGgLGs~VA~~La~~---GV--g~ItLVD~D 397 (715)
||+|.| .|++|+.+++.|+.. |+ -+++.+|..
T Consensus 2 ~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~ 39 (337)
T 1r6d_A 2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSL 39 (337)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECC
T ss_pred eEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECC
Confidence 699998 599999999999996 64 578888763
No 407
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=90.54 E-value=0.45 Score=47.85 Aligned_cols=30 Identities=30% Similarity=0.410 Sum_probs=26.7
Q ss_pred eEEEEcC-ChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 366 KCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 366 kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
||+|.|+ |.+|+.+++.|+..|. +++.++.
T Consensus 7 ~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r 37 (287)
T 3sc6_A 7 RVIITGANGQLGKQLQEELNPEEY-DIYPFDK 37 (287)
T ss_dssp EEEEESTTSHHHHHHHHHSCTTTE-EEEEECT
T ss_pred EEEEECCCCHHHHHHHHHHHhCCC-EEEEecc
Confidence 7999995 9999999999999984 7888776
No 408
>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A
Probab=90.53 E-value=0.29 Score=49.13 Aligned_cols=36 Identities=19% Similarity=0.272 Sum_probs=29.7
Q ss_pred HhhccCeEEEEcCC---hHHHHHHHHHHHhcCCeEEEEeC
Q 005071 360 DILSSRKCLLLGAG---TLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 360 ~kL~~~kVlIvGaG---gLGs~VA~~La~~GVg~ItLVD~ 396 (715)
-.+++++|+|.|++ |+|..+|+.|++.|. ++.++|.
T Consensus 16 ~~l~~k~vlITGas~~~giG~~~a~~l~~~G~-~v~~~~~ 54 (267)
T 3gdg_A 16 LSLKGKVVVVTGASGPKGMGIEAARGCAEMGA-AVAITYA 54 (267)
T ss_dssp HCCTTCEEEETTCCSSSSHHHHHHHHHHHTSC-EEEECBS
T ss_pred cCcCCCEEEEECCCCCCChHHHHHHHHHHCCC-eEEEEeC
Confidence 45788999999985 999999999999996 4556554
No 409
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=90.52 E-value=0.65 Score=48.66 Aligned_cols=43 Identities=16% Similarity=0.174 Sum_probs=33.8
Q ss_pred hhHHHhhccCCEEEEeCCChHHHHHHHHHHHhcCCeEEEeeeCC
Q 005071 466 RRLTDLILSHDVIFLLTDTRESRWLPTLLCANTNKITITAALGF 509 (715)
Q Consensus 466 ~~l~~li~~~DvV~~~tDs~esR~li~~~~~~~~kp~I~aalG~ 509 (715)
.++++++.++|+|||.|. +++-.-.-..|.++|+|+|.+..||
T Consensus 80 ~dl~~ll~~aDVvIDFT~-p~a~~~~~~~~l~~Gv~vViGTTG~ 122 (288)
T 3ijp_A 80 DDPESAFSNTEGILDFSQ-PQASVLYANYAAQKSLIHIIGTTGF 122 (288)
T ss_dssp SCHHHHTTSCSEEEECSC-HHHHHHHHHHHHHHTCEEEECCCCC
T ss_pred CCHHHHhcCCCEEEEcCC-HHHHHHHHHHHHHcCCCEEEECCCC
Confidence 355677789999999994 5555556678999999999877666
No 410
>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}
Probab=90.52 E-value=0.93 Score=45.35 Aligned_cols=33 Identities=12% Similarity=0.231 Sum_probs=25.9
Q ss_pred cCeEEEEc-CChHHHHHHHHHHHhcCC-eEEEEeC
Q 005071 364 SRKCLLLG-AGTLGCQVARMLMAWGVR-KITLLDN 396 (715)
Q Consensus 364 ~~kVlIvG-aGgLGs~VA~~La~~GVg-~ItLVD~ 396 (715)
+++|+|.| .||+|..+|+.|++.|.+ ++.+++.
T Consensus 2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r 36 (254)
T 3kzv_A 2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVAR 36 (254)
T ss_dssp CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEES
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecC
Confidence 46788887 579999999999999865 5555554
No 411
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=90.50 E-value=0.26 Score=46.24 Aligned_cols=32 Identities=34% Similarity=0.631 Sum_probs=29.5
Q ss_pred eEEEEcCChHHHHHHHHHHHhcCCeEEEEeCCc
Q 005071 366 KCLLLGAGTLGCQVARMLMAWGVRKITLLDNGR 398 (715)
Q Consensus 366 kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~D~ 398 (715)
+|+|||+|..|+++|..|++.|. +++++|...
T Consensus 3 ~vvIIGgG~~Gl~~A~~l~~~g~-~v~lie~~~ 34 (180)
T 2ywl_A 3 DVIVVGGGPSGLSAALFLARAGL-KVLVLDGGR 34 (180)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC-CEEEEECSC
T ss_pred eEEEECCCHHHHHHHHHHHHCCC-cEEEEeCCC
Confidence 79999999999999999999996 799999764
No 412
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=90.46 E-value=0.86 Score=46.03 Aligned_cols=36 Identities=28% Similarity=0.356 Sum_probs=28.8
Q ss_pred hhccCeEEEEcC-ChHHHHHHHHHHHhcCCeEEEEeCC
Q 005071 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNG 397 (715)
Q Consensus 361 kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD~D 397 (715)
.+++++|+|.|+ ||+|..+|+.|++.|. ++.++|.+
T Consensus 24 ~l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~ 60 (260)
T 3gem_A 24 TLSSAPILITGASQRVGLHCALRLLEHGH-RVIISYRT 60 (260)
T ss_dssp ---CCCEEESSTTSHHHHHHHHHHHHTTC-CEEEEESS
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 477899999985 8999999999999996 58888764
No 413
>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*
Probab=90.45 E-value=2.4 Score=43.65 Aligned_cols=33 Identities=21% Similarity=0.360 Sum_probs=27.3
Q ss_pred CeEEEEc-CChHHHHHHHHHHHhcC-CeEEEEeCC
Q 005071 365 RKCLLLG-AGTLGCQVARMLMAWGV-RKITLLDNG 397 (715)
Q Consensus 365 ~kVlIvG-aGgLGs~VA~~La~~GV-g~ItLVD~D 397 (715)
++|||.| .|++|+.+++.|+..|- -+++.+|..
T Consensus 5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~ 39 (348)
T 1oc2_A 5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKL 39 (348)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECC
T ss_pred cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCC
Confidence 5899999 59999999999999943 378888763
No 414
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=90.44 E-value=0.7 Score=46.55 Aligned_cols=34 Identities=26% Similarity=0.348 Sum_probs=28.2
Q ss_pred ccCeEEEEcC-ChHHHHHHHHHHHhcCCeEEEEeCC
Q 005071 363 SSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNG 397 (715)
Q Consensus 363 ~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD~D 397 (715)
..++|||.|+ |.+|+.+++.|+..| -+++.+|..
T Consensus 11 ~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~ 45 (292)
T 1vl0_A 11 HHMKILITGANGQLGREIQKQLKGKN-VEVIPTDVQ 45 (292)
T ss_dssp -CEEEEEESTTSHHHHHHHHHHTTSS-EEEEEECTT
T ss_pred ccceEEEECCCChHHHHHHHHHHhCC-CeEEeccCc
Confidence 4679999985 899999999999999 567877764
No 415
>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}
Probab=90.44 E-value=0.81 Score=47.22 Aligned_cols=36 Identities=28% Similarity=0.432 Sum_probs=30.1
Q ss_pred hccCeEEEEc-CChHHHHHHHHHHHhcC------CeEEEEeCC
Q 005071 362 LSSRKCLLLG-AGTLGCQVARMLMAWGV------RKITLLDNG 397 (715)
Q Consensus 362 L~~~kVlIvG-aGgLGs~VA~~La~~GV------g~ItLVD~D 397 (715)
+++.+|+|.| .|++|+.+++.|+..|. .+++++|..
T Consensus 12 ~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~ 54 (342)
T 2hrz_A 12 FQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVF 54 (342)
T ss_dssp CSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESS
T ss_pred ccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEcc
Confidence 4567899999 59999999999999993 578888764
No 416
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=90.39 E-value=0.53 Score=46.17 Aligned_cols=31 Identities=23% Similarity=0.318 Sum_probs=25.6
Q ss_pred CeEEEEc-CChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 365 RKCLLLG-AGTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 365 ~kVlIvG-aGgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
++|+|.| .||+|..+|+.|+..|.. +.++|.
T Consensus 2 k~vlVTGas~gIG~~~a~~l~~~G~~-V~~~~r 33 (230)
T 3guy_A 2 SLIVITGASSGLGAELAKLYDAEGKA-TYLTGR 33 (230)
T ss_dssp -CEEEESTTSHHHHHHHHHHHHTTCC-EEEEES
T ss_pred CEEEEecCCchHHHHHHHHHHHCCCE-EEEEeC
Confidence 4688887 569999999999999964 777776
No 417
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=90.37 E-value=0.25 Score=53.12 Aligned_cols=36 Identities=39% Similarity=0.489 Sum_probs=33.1
Q ss_pred cCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeCCcc
Q 005071 364 SRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRV 399 (715)
Q Consensus 364 ~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~D~V 399 (715)
...|+|||+|..|+.+|..|++.|..+++++|.+.+
T Consensus 6 ~~dVvIIGgG~aGlsaA~~La~~G~~~V~vlE~~~~ 41 (438)
T 3dje_A 6 SSSLLIVGAGTWGTSTALHLARRGYTNVTVLDPYPV 41 (438)
T ss_dssp TSCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSCS
T ss_pred CCCEEEECCCHHHHHHHHHHHHcCCCcEEEEeCCCC
Confidence 468999999999999999999999878999998776
No 418
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=90.33 E-value=0.25 Score=52.53 Aligned_cols=36 Identities=25% Similarity=0.460 Sum_probs=31.9
Q ss_pred ccCeEEEEcCChHHHHHHHHHHHhcCC-eEEEEeCCc
Q 005071 363 SSRKCLLLGAGTLGCQVARMLMAWGVR-KITLLDNGR 398 (715)
Q Consensus 363 ~~~kVlIvGaGgLGs~VA~~La~~GVg-~ItLVD~D~ 398 (715)
+++||+|||+|.-|..+|..|.+.|-+ +|||||...
T Consensus 1 aGKkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~ 37 (401)
T 3vrd_B 1 AGRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNE 37 (401)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred CcCEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCC
Confidence 368999999999999999999999875 899999754
No 419
>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*
Probab=90.32 E-value=0.4 Score=49.51 Aligned_cols=33 Identities=18% Similarity=0.283 Sum_probs=25.9
Q ss_pred ccCeEEEEc-CChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 363 SSRKCLLLG-AGTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 363 ~~~kVlIvG-aGgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
++++|||.| +|.+|+.+++.|+..|. +++.++.
T Consensus 4 ~~~~vlVTGatGfIG~~l~~~L~~~G~-~V~~~~r 37 (337)
T 2c29_D 4 QSETVCVTGASGFIGSWLVMRLLERGY-TVRATVR 37 (337)
T ss_dssp --CEEEETTTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCC-EEEEEEC
Confidence 568999998 79999999999999995 4554443
No 420
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=90.27 E-value=0.58 Score=47.73 Aligned_cols=34 Identities=29% Similarity=0.521 Sum_probs=29.2
Q ss_pred hccCeEEEEc-CChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 362 LSSRKCLLLG-AGTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 362 L~~~kVlIvG-aGgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
|++++|+|.| .||+|..+|+.|++.|. ++.++|.
T Consensus 3 l~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r 37 (281)
T 3zv4_A 3 LTGEVALITGGASGLGRALVDRFVAEGA-RVAVLDK 37 (281)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCcC-EEEEEeC
Confidence 6788999997 57999999999999996 6777765
No 421
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=90.25 E-value=0.44 Score=47.66 Aligned_cols=33 Identities=30% Similarity=0.361 Sum_probs=26.6
Q ss_pred ccCeEEEEcC-ChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 363 SSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 363 ~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
..++|+|.|+ ||+|..+|+.|++.|. ++.+++.
T Consensus 6 ~~k~vlVTGas~gIG~~~a~~l~~~G~-~v~~~~~ 39 (264)
T 3i4f_A 6 FVRHALITAGTKGLGKQVTEKLLAKGY-SVTVTYH 39 (264)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred ccCEEEEeCCCchhHHHHHHHHHHCCC-EEEEEcC
Confidence 4578899985 7899999999999997 5656544
No 422
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=90.14 E-value=0.95 Score=49.59 Aligned_cols=99 Identities=10% Similarity=0.055 Sum_probs=60.4
Q ss_pred hccCeEEEEcCChHHHHHHHHHHHh-cCCeEEEEeCCcccccCCCcCCCCCcchhcCCCCcHHHHHHHHHHhhC-CCcEE
Q 005071 362 LSSRKCLLLGAGTLGCQVARMLMAW-GVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIF-PAVAA 439 (715)
Q Consensus 362 L~~~kVlIvGaGgLGs~VA~~La~~-GVg~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~~KAeaaa~~L~~in-P~v~v 439 (715)
.+..||.|||+|.+|...++.|... |+.-..++|. ...|++.+++.+.+.. |.+.
T Consensus 18 ~~~~rvgiIG~G~~g~~h~~~l~~~~~~~lvav~d~----------------------~~~~~~~~a~~~~~~g~~~~~- 74 (444)
T 2ixa_A 18 PKKVRIAFIAVGLRGQTHVENMARRDDVEIVAFADP----------------------DPYMVGRAQEILKKNGKKPAK- 74 (444)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHTCTTEEEEEEECS----------------------CHHHHHHHHHHHHHTTCCCCE-
T ss_pred CCCceEEEEecCHHHHHHHHHHHhCCCcEEEEEEeC----------------------CHHHHHHHHHHHHhcCCCCCc-
Confidence 3456899999999999999988864 3333334443 3346667776665432 3222
Q ss_pred EEEecccCCCCCCCCCccccccccchhhHHHhhc--cCCEEEEeCCChHHHHHHHHHHHhcCCeEEE
Q 005071 440 EGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLIL--SHDVIFLLTDTRESRWLPTLLCANTNKITIT 504 (715)
Q Consensus 440 ~~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~--~~DvV~~~tDs~esR~li~~~~~~~~kp~I~ 504 (715)
.+.. ..++.+++++ +.|+|+.||-+. ...-+...|.+.||.++.
T Consensus 75 -~~~~-------------------~~~~~~~ll~~~~vD~V~i~tp~~-~h~~~~~~al~aGkhV~~ 120 (444)
T 2ixa_A 75 -VFGN-------------------GNDDYKNMLKDKNIDAVFVSSPWE-WHHEHGVAAMKAGKIVGM 120 (444)
T ss_dssp -EECS-------------------STTTHHHHTTCTTCCEEEECCCGG-GHHHHHHHHHHTTCEEEE
T ss_pred -eecc-------------------CCCCHHHHhcCCCCCEEEEcCCcH-HHHHHHHHHHHCCCeEEE
Confidence 2210 1224556665 588898888753 444455567778887664
No 423
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=90.13 E-value=0.48 Score=49.86 Aligned_cols=88 Identities=17% Similarity=0.207 Sum_probs=53.4
Q ss_pred CeEEEEcCChHHHHHHHHHHHh-cCCeEEEEeCCcccccCCCcCCCCCcchhcCCCCcHHHHHHHHHHhhCCCcEEEEEe
Q 005071 365 RKCLLLGAGTLGCQVARMLMAW-GVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEGVV 443 (715)
Q Consensus 365 ~kVlIvGaGgLGs~VA~~La~~-GVg~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~~KAeaaa~~L~~inP~v~v~~~~ 443 (715)
.||.|||+|.+|...++.|.+. |+.-+.++|. ...|++.+++... +. ..
T Consensus 3 ~rvgiIG~G~~g~~~~~~l~~~~~~~l~av~d~----------------------~~~~~~~~~~~~~-----~~-~~-- 52 (344)
T 3ezy_A 3 LRIGVIGLGRIGTIHAENLKMIDDAILYAISDV----------------------REDRLREMKEKLG-----VE-KA-- 52 (344)
T ss_dssp EEEEEECCSHHHHHHHHHGGGSTTEEEEEEECS----------------------CHHHHHHHHHHHT-----CS-EE--
T ss_pred eEEEEEcCCHHHHHHHHHHHhCCCcEEEEEECC----------------------CHHHHHHHHHHhC-----CC-ce--
Confidence 4899999999999999999875 3333335554 2224444444321 10 11
Q ss_pred cccCCCCCCCCCccccccccchhhHHHhhc--cCCEEEEeCCChHHHHHHHHHHHhcCCeEEE
Q 005071 444 MAIPMPGHPVPCQEEDSVLDDCRRLTDLIL--SHDVIFLLTDTRESRWLPTLLCANTNKITIT 504 (715)
Q Consensus 444 ~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~--~~DvV~~~tDs~esR~li~~~~~~~~kp~I~ 504 (715)
..+.+++++ +.|+|+.||-+. ...-+...|.+.||+++.
T Consensus 53 ---------------------~~~~~~ll~~~~~D~V~i~tp~~-~h~~~~~~al~~gk~v~~ 93 (344)
T 3ezy_A 53 ---------------------YKDPHELIEDPNVDAVLVCSSTN-THSELVIACAKAKKHVFC 93 (344)
T ss_dssp ---------------------ESSHHHHHHCTTCCEEEECSCGG-GHHHHHHHHHHTTCEEEE
T ss_pred ---------------------eCCHHHHhcCCCCCEEEEcCCCc-chHHHHHHHHhcCCeEEE
Confidence 123345555 789999888764 334445566778887763
No 424
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=90.05 E-value=0.55 Score=49.24 Aligned_cols=33 Identities=3% Similarity=-0.075 Sum_probs=24.8
Q ss_pred cCeEEEEcCChHHHHHHHHHHHh-cCCeEEEEeC
Q 005071 364 SRKCLLLGAGTLGCQVARMLMAW-GVRKITLLDN 396 (715)
Q Consensus 364 ~~kVlIvGaGgLGs~VA~~La~~-GVg~ItLVD~ 396 (715)
..||.|||+|.+|...++.|... |+.-+.++|.
T Consensus 5 ~~~igiiG~G~~g~~~~~~l~~~~~~~l~av~d~ 38 (330)
T 3e9m_A 5 KIRYGIMSTAQIVPRFVAGLRESAQAEVRGIASR 38 (330)
T ss_dssp CEEEEECSCCTTHHHHHHHHHHSSSEEEEEEBCS
T ss_pred eEEEEEECchHHHHHHHHHHHhCCCcEEEEEEeC
Confidence 45899999999999999999986 3332334444
No 425
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=89.99 E-value=0.32 Score=50.87 Aligned_cols=36 Identities=22% Similarity=0.444 Sum_probs=32.0
Q ss_pred cCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeCCccc
Q 005071 364 SRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVA 400 (715)
Q Consensus 364 ~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~D~Ve 400 (715)
...|+|||+|-.|+.+|..|++.|. +++++|.+.+.
T Consensus 6 ~~dVvVIG~Gi~Gls~A~~La~~G~-~V~vle~~~~~ 41 (363)
T 1c0p_A 6 QKRVVVLGSGVIGLSSALILARKGY-SVHILARDLPE 41 (363)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSCTT
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCC-EEEEEeccCCC
Confidence 4689999999999999999999996 79999987654
No 426
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=89.93 E-value=1.6 Score=43.40 Aligned_cols=35 Identities=23% Similarity=0.366 Sum_probs=29.6
Q ss_pred hhccCeEEEEc-CChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 361 ILSSRKCLLLG-AGTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 361 kL~~~kVlIvG-aGgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
.+++++|+|.| .||+|..+|+.|++.|. ++.++|.
T Consensus 4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r 39 (249)
T 2ew8_A 4 RLKDKLAVITGGANGIGRAIAERFAVEGA-DIAIADL 39 (249)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcC
Confidence 36788999997 67999999999999996 5777775
No 427
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=89.90 E-value=0.22 Score=52.41 Aligned_cols=32 Identities=25% Similarity=0.380 Sum_probs=28.3
Q ss_pred cCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 364 SRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 364 ~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
..||+|||+|.+|+.+|..|++.|. .++++|.
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~g~-~V~~~~r 34 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALAGE-AINVLAR 34 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHTTC-CEEEECC
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCC-EEEEEEC
Confidence 4689999999999999999999995 6777765
No 428
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=89.88 E-value=0.57 Score=46.72 Aligned_cols=33 Identities=21% Similarity=0.381 Sum_probs=27.8
Q ss_pred cCeEEEEcC-ChHHHHHHHHHHHhcCCeEEEEeCC
Q 005071 364 SRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNG 397 (715)
Q Consensus 364 ~~kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD~D 397 (715)
+++|+|.|+ ||+|..+|+.|++.|. ++.++|.+
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~ 35 (247)
T 3dii_A 2 NRGVIVTGGGHGIGKQICLDFLEAGD-KVCFIDID 35 (247)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 467899975 7999999999999996 68887764
No 429
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=89.88 E-value=0.29 Score=49.51 Aligned_cols=32 Identities=25% Similarity=0.197 Sum_probs=29.3
Q ss_pred eEEEEcCChHHHHHHHHHHHhcCCeEEEEeCCc
Q 005071 366 KCLLLGAGTLGCQVARMLMAWGVRKITLLDNGR 398 (715)
Q Consensus 366 kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~D~ 398 (715)
||+|||+|.+|+.+|..|++.|. +++++|.+.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~r~~ 33 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGH-EVQGWLRVP 33 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC-EEEEECSSC
T ss_pred eEEEECcCHHHHHHHHHHHhCCC-CEEEEEcCc
Confidence 79999999999999999999996 899998754
No 430
>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}
Probab=89.87 E-value=0.9 Score=48.74 Aligned_cols=84 Identities=15% Similarity=0.109 Sum_probs=56.7
Q ss_pred HhhccCeEEEEcC-ChHHHHHHHHHHHhcC-C-----eEEEEeCCcccccCCCcCCCCCcchhcCCCCcHHHHHHHHHHh
Q 005071 360 DILSSRKCLLLGA-GTLGCQVARMLMAWGV-R-----KITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLER 432 (715)
Q Consensus 360 ~kL~~~kVlIvGa-GgLGs~VA~~La~~GV-g-----~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~~KAeaaa~~L~~ 432 (715)
..++..||.|+|| |++|..++..|+...+ + .|.|+|-. . ++.|++-.+--|..
T Consensus 20 ~s~~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~---------------~-----~~~~~~Gva~DL~~ 79 (345)
T 4h7p_A 20 GSMSAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIE---------------P-----ALKALAGVEAELED 79 (345)
T ss_dssp --CCCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCG---------------G-----GHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCC---------------C-----ccccchhhhhhhhh
Confidence 4556669999997 9999999999987654 3 68887741 0 44566766767777
Q ss_pred hCCCcEEEEEecccCCCCCCCCCccccccccchhhHHHhhccCCEEEEeCCC
Q 005071 433 IFPAVAAEGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDT 484 (715)
Q Consensus 433 inP~v~v~~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs 484 (715)
.........+.. .+..+-++++|+||.+..-
T Consensus 80 ~~~~~~~~~~~~---------------------~~~~~a~~~advVvi~aG~ 110 (345)
T 4h7p_A 80 CAFPLLDKVVVT---------------------ADPRVAFDGVAIAIMCGAF 110 (345)
T ss_dssp TTCTTEEEEEEE---------------------SCHHHHTTTCSEEEECCCC
T ss_pred cCccCCCcEEEc---------------------CChHHHhCCCCEEEECCCC
Confidence 654444443321 1234567999999998763
No 431
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=89.86 E-value=0.62 Score=48.49 Aligned_cols=31 Identities=13% Similarity=0.275 Sum_probs=24.0
Q ss_pred eEEEEcCChHHHHHHHHHHHhc-CCeEEEEeC
Q 005071 366 KCLLLGAGTLGCQVARMLMAWG-VRKITLLDN 396 (715)
Q Consensus 366 kVlIvGaGgLGs~VA~~La~~G-Vg~ItLVD~ 396 (715)
||.|||+|.+|...++.|...+ +.-+.++|.
T Consensus 3 ~vgiiG~G~~g~~~~~~l~~~~~~~~~~v~d~ 34 (325)
T 2ho3_A 3 KLGVIGTGAISHHFIEAAHTSGEYQLVAIYSR 34 (325)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTSEEEEEEECS
T ss_pred EEEEEeCCHHHHHHHHHHHhCCCeEEEEEEeC
Confidence 7999999999999999998874 333335554
No 432
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=89.83 E-value=0.97 Score=45.29 Aligned_cols=87 Identities=15% Similarity=0.130 Sum_probs=54.1
Q ss_pred cCeEEEEcCChHHHHHHHH--HHHhcCCeEEEEeCCcccccCCCcCCCCCcchhcCCCCcHHHHHHHHHHhhCCCcEEEE
Q 005071 364 SRKCLLLGAGTLGCQVARM--LMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEG 441 (715)
Q Consensus 364 ~~kVlIvGaGgLGs~VA~~--La~~GVg~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~~KAeaaa~~L~~inP~v~v~~ 441 (715)
..||+|+|||.+|..++++ +...|+.=+-++|.|.= + + |+. + -++.+.
T Consensus 85 ~~rV~IIGAG~~G~~La~~~~~~~~g~~iVg~~D~dp~------k--------~---g~~-----------i-~gv~V~- 134 (215)
T 2vt3_A 85 MTDVILIGVGNLGTAFLHYNFTKNNNTKISMAFDINES------K--------I---GTE-----------V-GGVPVY- 134 (215)
T ss_dssp --CEEEECCSHHHHHHHHCC------CCEEEEEESCTT------T--------T---TCE-----------E-TTEEEE-
T ss_pred CCEEEEEccCHHHHHHHHHHhcccCCcEEEEEEeCCHH------H--------H---HhH-----------h-cCCeee-
Confidence 3689999999999999995 34568888889987431 1 1 210 0 012222
Q ss_pred EecccCCCCCCCCCccccccccchhhHHHhhccCCEEEEeCCChHHHHHHHHHHHhcCCeEE
Q 005071 442 VVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTRESRWLPTLLCANTNKITI 503 (715)
Q Consensus 442 ~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~esR~li~~~~~~~~kp~I 503 (715)
..++++++++++|+|+.|+-+.... -+...|.+.|+..|
T Consensus 135 ----------------------~~~dl~eli~~~D~ViIAvPs~~~~-ei~~~l~~aGi~~I 173 (215)
T 2vt3_A 135 ----------------------NLDDLEQHVKDESVAILTVPAVAAQ-SITDRLVALGIKGI 173 (215)
T ss_dssp ----------------------EGGGHHHHCSSCCEEEECSCHHHHH-HHHHHHHHTTCCEE
T ss_pred ----------------------chhhHHHHHHhCCEEEEecCchhHH-HHHHHHHHcCCCEE
Confidence 1345777887779999999876654 45566778887644
No 433
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=89.81 E-value=0.83 Score=46.10 Aligned_cols=39 Identities=10% Similarity=0.123 Sum_probs=32.8
Q ss_pred HhhccCeEEEEcC-ChHHHHHHHHHHHhcCCeEEEEeCCcc
Q 005071 360 DILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRV 399 (715)
Q Consensus 360 ~kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD~D~V 399 (715)
-.+++++|+|.|+ ||+|..+|+.|++.|. ++.++|.+.-
T Consensus 24 ~~~~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~ 63 (260)
T 3un1_A 24 MRNQQKVVVITGASQGIGAGLVRAYRDRNY-RVVATSRSIK 63 (260)
T ss_dssp HHTTCCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSCC
T ss_pred hCcCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChh
Confidence 4678899999985 7999999999999996 6888887643
No 434
>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A
Probab=89.74 E-value=2.2 Score=43.72 Aligned_cols=32 Identities=28% Similarity=0.439 Sum_probs=26.9
Q ss_pred CeEEEEcC-ChHHHHHHHHHHHh-cCCeEEEEeCC
Q 005071 365 RKCLLLGA-GTLGCQVARMLMAW-GVRKITLLDNG 397 (715)
Q Consensus 365 ~kVlIvGa-GgLGs~VA~~La~~-GVg~ItLVD~D 397 (715)
.+|+|.|+ |.+|+.+++.|+.. | -+++.+|..
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~~g-~~V~~~~r~ 34 (345)
T 2bll_A 1 MRVLILGVNGFIGNHLTERLLREDH-YEVYGLDIG 34 (345)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTT-CEEEEEESC
T ss_pred CeEEEECCCcHHHHHHHHHHHHhCC-CEEEEEeCC
Confidence 37999997 99999999999998 6 467777763
No 435
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=89.72 E-value=0.28 Score=55.03 Aligned_cols=35 Identities=17% Similarity=0.368 Sum_probs=32.1
Q ss_pred hhccCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 361 ILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 361 kL~~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
.|.+++|+|+|+|++|..+|+.|.+.|. ++.++|.
T Consensus 262 ~L~GKtVvVtGaGgIG~aiA~~Laa~GA-~Viv~D~ 296 (488)
T 3ond_A 262 MIAGKVAVVAGYGDVGKGCAAALKQAGA-RVIVTEI 296 (488)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECS
T ss_pred cccCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcC
Confidence 4789999999999999999999999998 7888776
No 436
>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=89.68 E-value=0.64 Score=50.05 Aligned_cols=97 Identities=27% Similarity=0.277 Sum_probs=64.6
Q ss_pred CeEEEEcC-ChHHHHHHHHHHHhcCCeEEEEeCCcccccCCCcCCCCCcchhcCCCCcHHHHHHHHHHhhCCCcEEEEEe
Q 005071 365 RKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEGVV 443 (715)
Q Consensus 365 ~kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~~KAeaaa~~L~~inP~v~v~~~~ 443 (715)
.||.|||+ |.+|.++.+.|..--.-+|+.+.. .+.. |++ +.+.+|... ..
T Consensus 14 ~~V~IvGAtG~vG~ellrlL~~hP~~el~~l~S---------------~~~a---G~~--------~~~~~p~~~---~~ 64 (351)
T 1vkn_A 14 IRAGIIGATGYTGLELVRLLKNHPEAKITYLSS---------------RTYA---GKK--------LEEIFPSTL---EN 64 (351)
T ss_dssp EEEEEESTTSHHHHHHHHHHHHCTTEEEEEEEC---------------STTT---TSB--------HHHHCGGGC---CC
T ss_pred eEEEEECCCCHHHHHHHHHHHcCCCcEEEEEeC---------------cccc---cCC--------hHHhChhhc---cC
Confidence 47999985 889999999999877667766543 2233 654 444566544 11
Q ss_pred cccCCCCCCCCCccccccccchhhHHHhhccCCEEEEeCCChHHHHHHHHHHHhcCCeEEEe--eeCCc
Q 005071 444 MAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTRESRWLPTLLCANTNKITITA--ALGFD 510 (715)
Q Consensus 444 ~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~esR~li~~~~~~~~kp~I~a--alG~~ 510 (715)
..+ ...+ .+++.+++|+||.|+..-.++-+...+ .|..+|+. +..++
T Consensus 65 l~~--------------~~~~---~~~~~~~~Dvvf~alp~~~s~~~~~~~---~g~~VIDlSsdfRl~ 113 (351)
T 1vkn_A 65 SIL--------------SEFD---PEKVSKNCDVLFTALPAGASYDLVREL---KGVKIIDLGADFRFD 113 (351)
T ss_dssp CBC--------------BCCC---HHHHHHHCSEEEECCSTTHHHHHHTTC---CSCEEEESSSTTTCS
T ss_pred ceE--------------EeCC---HHHhhcCCCEEEECCCcHHHHHHHHHh---CCCEEEECChhhhCC
Confidence 111 0112 234457899999999998888776666 68889985 35544
No 437
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=89.67 E-value=0.5 Score=48.59 Aligned_cols=36 Identities=25% Similarity=0.339 Sum_probs=27.9
Q ss_pred hhccCeEEEEcC-ChHHHHHHHHHHHhcCCeEEEEeCC
Q 005071 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNG 397 (715)
Q Consensus 361 kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD~D 397 (715)
+-.+.+|||.|+ |++|+.+++.|+..|. +++.+|..
T Consensus 11 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~ 47 (335)
T 1rpn_A 11 GSMTRSALVTGITGQDGAYLAKLLLEKGY-RVHGLVAR 47 (335)
T ss_dssp ----CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECC
T ss_pred cccCCeEEEECCCChHHHHHHHHHHHCCC-eEEEEeCC
Confidence 345789999985 9999999999999994 78887763
No 438
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=89.64 E-value=1.2 Score=46.90 Aligned_cols=33 Identities=21% Similarity=0.333 Sum_probs=28.6
Q ss_pred ccCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 363 SSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 363 ~~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
.+.+|||+|+|++|..++..+...|.+ ++.+|.
T Consensus 168 ~g~~VlV~GaG~vG~~a~qla~~~Ga~-Vi~~~~ 200 (352)
T 1e3j_A 168 LGTTVLVIGAGPIGLVSVLAAKAYGAF-VVCTAR 200 (352)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCE-EEEEES
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCE-EEEEcC
Confidence 467999999999999999999899987 777764
No 439
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=89.57 E-value=0.72 Score=48.71 Aligned_cols=32 Identities=16% Similarity=0.189 Sum_probs=28.5
Q ss_pred CeEEEEcC-ChHHHHHHHHHHHhcCC------eEEEEeC
Q 005071 365 RKCLLLGA-GTLGCQVARMLMAWGVR------KITLLDN 396 (715)
Q Consensus 365 ~kVlIvGa-GgLGs~VA~~La~~GVg------~ItLVD~ 396 (715)
.||+|+|+ |.+|+.++..|+..|.- +|.++|.
T Consensus 6 ~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di 44 (329)
T 1b8p_A 6 MRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEI 44 (329)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcC
Confidence 58999998 99999999999998873 7999886
No 440
>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}
Probab=89.50 E-value=0.92 Score=44.39 Aligned_cols=29 Identities=28% Similarity=0.424 Sum_probs=23.8
Q ss_pred CeEEEEc-CChHHHHHHHHHHHhcCCeEEEE
Q 005071 365 RKCLLLG-AGTLGCQVARMLMAWGVRKITLL 394 (715)
Q Consensus 365 ~kVlIvG-aGgLGs~VA~~La~~GVg~ItLV 394 (715)
++|+|.| .||+|..+|+.|++.|. +++++
T Consensus 2 k~vlITGasggiG~~~a~~l~~~G~-~v~~~ 31 (245)
T 2ph3_A 2 RKALITGASRGIGRAIALRLAEDGF-ALAIH 31 (245)
T ss_dssp CEEEETTTTSHHHHHHHHHHHTTTC-EEEEE
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCC-EEEEE
Confidence 5788887 58999999999999996 45554
No 441
>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}
Probab=89.47 E-value=0.44 Score=45.48 Aligned_cols=29 Identities=34% Similarity=0.489 Sum_probs=24.6
Q ss_pred CeEEEEcC-ChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 365 RKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 365 ~kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
++|+|.|+ |++|..+++.|+.. +++++|.
T Consensus 1 k~vlVtGasg~iG~~la~~l~~~---~V~~~~r 30 (207)
T 2yut_A 1 MRVLITGATGGLGGAFARALKGH---DLLLSGR 30 (207)
T ss_dssp CEEEEETTTSHHHHHHHHHTTTS---EEEEECS
T ss_pred CEEEEEcCCcHHHHHHHHHHHhC---CEEEEEC
Confidence 46899975 89999999999987 8888765
No 442
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=89.24 E-value=2.2 Score=47.77 Aligned_cols=34 Identities=29% Similarity=0.347 Sum_probs=26.3
Q ss_pred cCeEEEEcCChH--HHHHHHHHHHh-c--CCeEEEEeCC
Q 005071 364 SRKCLLLGAGTL--GCQVARMLMAW-G--VRKITLLDNG 397 (715)
Q Consensus 364 ~~kVlIvGaGgL--Gs~VA~~La~~-G--Vg~ItLVD~D 397 (715)
..||.|||+|++ |..+|..|+.. + ..+++|+|.+
T Consensus 3 ~~KIaVIGAGsVg~g~ala~~La~~~~l~~~eV~L~Di~ 41 (480)
T 1obb_A 3 SVKIGIIGAGSAVFSLRLVSDLCKTPGLSGSTVTLMDID 41 (480)
T ss_dssp CCEEEEETTTCHHHHHHHHHHHHTCGGGTTCEEEEECSC
T ss_pred CCEEEEECCCchHHHHHHHHHHHhcCcCCCCEEEEEeCC
Confidence 568999999996 56667788743 2 4789999973
No 443
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=89.21 E-value=0.28 Score=51.17 Aligned_cols=32 Identities=25% Similarity=0.380 Sum_probs=28.1
Q ss_pred CeEEEEcCChHHHHHHHHHHHhcCCeEEEEeCC
Q 005071 365 RKCLLLGAGTLGCQVARMLMAWGVRKITLLDNG 397 (715)
Q Consensus 365 ~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~D 397 (715)
.||+|||+|.+|+.+|..|++.|. +++++|.+
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~-~V~~~~r~ 34 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGE-DVHFLLRR 34 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSC-CEEEECST
T ss_pred CEEEEECcCHHHHHHHHHHHHCCC-eEEEEEcC
Confidence 589999999999999999999995 78888764
No 444
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=89.12 E-value=0.36 Score=50.66 Aligned_cols=36 Identities=19% Similarity=0.485 Sum_probs=32.1
Q ss_pred cCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeCCccc
Q 005071 364 SRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVA 400 (715)
Q Consensus 364 ~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~D~Ve 400 (715)
...|+|||+|-.|+.+|..|++.|. +++++|.+.+.
T Consensus 5 ~~dVvIIGgGi~Gl~~A~~La~~G~-~V~lle~~~~~ 40 (382)
T 1y56_B 5 KSEIVVIGGGIVGVTIAHELAKRGE-EVTVIEKRFIG 40 (382)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHTTC-CEEEECSSSTT
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCC-eEEEEeCCCCC
Confidence 4689999999999999999999997 59999987654
No 445
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=89.10 E-value=1 Score=45.69 Aligned_cols=35 Identities=23% Similarity=0.281 Sum_probs=28.6
Q ss_pred hhccCeEEEEc-CChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 361 ILSSRKCLLLG-AGTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 361 kL~~~kVlIvG-aGgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
.+++++|+|.| .||+|..+|+.|++.|. ++.++|.
T Consensus 26 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r 61 (283)
T 1g0o_A 26 SLEGKVALVTGAGRGIGREMAMELGRRGC-KVIVNYA 61 (283)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence 36778888887 67999999999999996 5666664
No 446
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=89.09 E-value=0.35 Score=52.29 Aligned_cols=38 Identities=21% Similarity=0.269 Sum_probs=32.9
Q ss_pred hHHhhccCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 358 NLDILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 358 gq~kL~~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
|.+.|++++|+|+|+|.+|..+|+.|...|. ++++.|.
T Consensus 167 G~~~L~GktV~V~G~G~VG~~~A~~L~~~Ga-kVvv~D~ 204 (364)
T 1leh_A 167 GSDSLEGLAVSVQGLGNVAKALCKKLNTEGA-KLVVTDV 204 (364)
T ss_dssp SSCCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECS
T ss_pred cccCCCcCEEEEECchHHHHHHHHHHHHCCC-EEEEEcC
Confidence 3335889999999999999999999999998 4778874
No 447
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=88.97 E-value=0.56 Score=49.11 Aligned_cols=33 Identities=27% Similarity=0.427 Sum_probs=24.8
Q ss_pred cCeEEEEcCChHHHHHHHHHH-Hh-cCCeEEEEeC
Q 005071 364 SRKCLLLGAGTLGCQVARMLM-AW-GVRKITLLDN 396 (715)
Q Consensus 364 ~~kVlIvGaGgLGs~VA~~La-~~-GVg~ItLVD~ 396 (715)
..||+|||+|.+|...++.|. .. |+.-+.++|.
T Consensus 8 ~~~v~iiG~G~ig~~~~~~l~~~~~~~~~vav~d~ 42 (346)
T 3cea_A 8 PLRAAIIGLGRLGERHARHLVNKIQGVKLVAACAL 42 (346)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHTCSSEEEEEEECS
T ss_pred cceEEEEcCCHHHHHHHHHHHhcCCCcEEEEEecC
Confidence 358999999999999999998 43 5444455554
No 448
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=88.89 E-value=0.75 Score=45.70 Aligned_cols=36 Identities=22% Similarity=0.313 Sum_probs=26.2
Q ss_pred HHhhccCeEEEEc-CChHHHHHHHHHHHhcCCeEEEEe
Q 005071 359 LDILSSRKCLLLG-AGTLGCQVARMLMAWGVRKITLLD 395 (715)
Q Consensus 359 q~kL~~~kVlIvG-aGgLGs~VA~~La~~GVg~ItLVD 395 (715)
...+++++|+|.| .||+|..+|+.|++.|.. +.++|
T Consensus 8 ~~~~~~k~vlITGas~giG~~ia~~l~~~G~~-v~~~~ 44 (256)
T 3ezl_A 8 HMVMSQRIAYVTGGMGGIGTSICQRLHKDGFR-VVAGC 44 (256)
T ss_dssp -----CEEEEETTTTSHHHHHHHHHHHHTTEE-EEEEE
T ss_pred CCCCCCCEEEEECCCChHHHHHHHHHHHCCCE-EEEEe
Confidence 4567888999997 579999999999999964 55555
No 449
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=88.88 E-value=0.28 Score=50.68 Aligned_cols=32 Identities=22% Similarity=0.289 Sum_probs=29.5
Q ss_pred CeEEEEcCChHHHHHHHHHHHhcCCeEEEEeCC
Q 005071 365 RKCLLLGAGTLGCQVARMLMAWGVRKITLLDNG 397 (715)
Q Consensus 365 ~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~D 397 (715)
.||+|||+|++|+.+|..|++.|. +++++|.+
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~-~V~~~~r~ 34 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLP-HTTLIGRH 34 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCT-TCEEEESS
T ss_pred cEEEEECCCHHHHHHHHHHHHCCC-eEEEEEec
Confidence 589999999999999999999995 79999876
No 450
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=88.87 E-value=0.42 Score=51.16 Aligned_cols=35 Identities=34% Similarity=0.445 Sum_probs=31.9
Q ss_pred cCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeCCc
Q 005071 364 SRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGR 398 (715)
Q Consensus 364 ~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~D~ 398 (715)
..+|+|||+|..|+.+|..|++.|+.+++|+|...
T Consensus 4 ~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~ 38 (410)
T 3c96_A 4 PIDILIAGAGIGGLSCALALHQAGIGKVTLLESSS 38 (410)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCC
Confidence 46899999999999999999999997799999754
No 451
>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}
Probab=88.84 E-value=1.1 Score=50.43 Aligned_cols=93 Identities=16% Similarity=0.137 Sum_probs=56.4
Q ss_pred cCeEEEEc-CChHHHHHHHHHHHhcCCeEEEE-eCCcccccCCCcCCCCCcchhcCCCCcHHHHHHHHHHhhCCCcEEEE
Q 005071 364 SRKCLLLG-AGTLGCQVARMLMAWGVRKITLL-DNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEG 441 (715)
Q Consensus 364 ~~kVlIvG-aGgLGs~VA~~La~~GVg~ItLV-D~D~Ve~sNl~RQ~L~~~~Di~~~G~~KAeaaa~~L~~inP~v~v~~ 441 (715)
++.++|.| .||||..+|+.|++.|..++.++ +........-. ..+. ...+++.+.+.|.+.. .++..
T Consensus 251 ~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~------~~~~---~~~~~~~~~~~l~~~g--~~v~~ 319 (525)
T 3qp9_A 251 DGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGT------SGAA---EDSGLAGLVAELADLG--ATATV 319 (525)
T ss_dssp TSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC------------------------CHHHHHHHHHHT--CEEEE
T ss_pred CCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccc------cccc---cCHHHHHHHHHHHhcC--CEEEE
Confidence 45677775 79999999999999999999998 77543211100 0111 2445566667777654 56666
Q ss_pred EecccCCCCCCCCCccccccccchhhHHHhhcc------CCEEEEeCC
Q 005071 442 VVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILS------HDVIFLLTD 483 (715)
Q Consensus 442 ~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~------~DvV~~~tD 483 (715)
+..++ .+.+.+..+++. .|+||.+..
T Consensus 320 ~~~Dv----------------td~~~v~~~~~~i~~~g~id~vVh~AG 351 (525)
T 3qp9_A 320 VTCDL----------------TDAEAAARLLAGVSDAHPLSAVLHLPP 351 (525)
T ss_dssp EECCT----------------TSHHHHHHHHHTSCTTSCEEEEEECCC
T ss_pred EECCC----------------CCHHHHHHHHHHHHhcCCCcEEEECCc
Confidence 66554 244555555554 588888754
No 452
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=88.84 E-value=1.1 Score=47.00 Aligned_cols=32 Identities=16% Similarity=0.173 Sum_probs=27.2
Q ss_pred eEEEEc-CChHHHHHHHHHHHhcCCeEEEEeCC
Q 005071 366 KCLLLG-AGTLGCQVARMLMAWGVRKITLLDNG 397 (715)
Q Consensus 366 kVlIvG-aGgLGs~VA~~La~~GVg~ItLVD~D 397 (715)
||||.| .|.+|..+++.|++.|.-+++.+|.+
T Consensus 2 ~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~ 34 (369)
T 3st7_A 2 NIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ 34 (369)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC
Confidence 799999 69999999999999997567766654
No 453
>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus}
Probab=88.80 E-value=1.2 Score=47.57 Aligned_cols=32 Identities=19% Similarity=0.064 Sum_probs=25.9
Q ss_pred cCCEEEEeCCChHHHHHHHHHHHhcCCeEEEe
Q 005071 474 SHDVIFLLTDTRESRWLPTLLCANTNKITITA 505 (715)
Q Consensus 474 ~~DvV~~~tDs~esR~li~~~~~~~~kp~I~a 505 (715)
+.|+|++||-+.+........|.+.||.+|.+
T Consensus 66 ~iDvVve~t~~~~~a~~~~~~AL~aGKhVVta 97 (332)
T 2ejw_A 66 EADLVVEAMGGVEAPLRLVLPALEAGIPLITA 97 (332)
T ss_dssp TCSEEEECCCCSHHHHHHHHHHHHTTCCEEEC
T ss_pred CCCEEEECCCCcHHHHHHHHHHHHcCCeEEEC
Confidence 78999999998765555556788999998875
No 454
>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*
Probab=88.74 E-value=0.42 Score=50.34 Aligned_cols=32 Identities=22% Similarity=0.343 Sum_probs=28.2
Q ss_pred CeEEEEcC-ChHHHHHHHHHHHhcCCeEEEEeCC
Q 005071 365 RKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNG 397 (715)
Q Consensus 365 ~kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD~D 397 (715)
++|||.|+ |++|+.+++.|+..|. +++++|..
T Consensus 29 k~vlVtGatG~IG~~l~~~L~~~g~-~V~~~~r~ 61 (381)
T 1n7h_A 29 KIALITGITGQDGSYLTEFLLGKGY-EVHGLIRR 61 (381)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECC
T ss_pred CeEEEEcCCchHHHHHHHHHHHCCC-EEEEEecC
Confidence 68999997 9999999999999994 78888764
No 455
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=88.71 E-value=0.42 Score=50.93 Aligned_cols=38 Identities=21% Similarity=0.297 Sum_probs=31.4
Q ss_pred HhhccCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeCCc
Q 005071 360 DILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGR 398 (715)
Q Consensus 360 ~kL~~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~D~ 398 (715)
+.-+..+|+|||+|-.|+.+|..|++.|+ +++|+|.+.
T Consensus 19 ~~~~~~dV~IVGaG~aGl~~A~~La~~G~-~V~v~E~~~ 56 (407)
T 3rp8_A 19 YFQGHMKAIVIGAGIGGLSAAVALKQSGI-DCDVYEAVK 56 (407)
T ss_dssp ----CCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSS
T ss_pred cCCCCCEEEEECCCHHHHHHHHHHHhCCC-CEEEEeCCC
Confidence 44556799999999999999999999997 699999864
No 456
>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*
Probab=88.71 E-value=1 Score=45.03 Aligned_cols=31 Identities=19% Similarity=0.292 Sum_probs=25.1
Q ss_pred CeEEEEc-CChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 365 RKCLLLG-AGTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 365 ~kVlIvG-aGgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
++|+|.| .||+|..+|+.|++.|. ++.++|.
T Consensus 1 k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r 32 (248)
T 3asu_A 1 MIVLVTGATAGFGECITRRFIQQGH-KVIATGR 32 (248)
T ss_dssp CEEEETTTTSTTHHHHHHHHHHTTC-EEEEEES
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC-EEEEEeC
Confidence 3577777 58999999999999995 5777664
No 457
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=88.70 E-value=0.36 Score=50.52 Aligned_cols=36 Identities=19% Similarity=0.447 Sum_probs=32.1
Q ss_pred cCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeCCccc
Q 005071 364 SRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVA 400 (715)
Q Consensus 364 ~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~D~Ve 400 (715)
...|+|||+|..|+.+|..|++.|. +++|+|.+.+.
T Consensus 17 ~~dvvIIGgG~~Gl~~A~~La~~G~-~V~llE~~~~~ 52 (382)
T 1ryi_A 17 HYEAVVIGGGIIGSAIAYYLAKENK-NTALFESGTMG 52 (382)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTC-CEEEECSSSTT
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCC-cEEEEeCCCCC
Confidence 4589999999999999999999997 79999987543
No 458
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=88.70 E-value=1.9 Score=48.57 Aligned_cols=86 Identities=22% Similarity=0.289 Sum_probs=62.7
Q ss_pred CeEEEEcCChHHHHHHHHHHHhcCCeEEEEeCCcccccCCCcCCCCCcchhcCCCCcHHHHHHHHHHhhCCCcEEEEEec
Q 005071 365 RKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEGVVM 444 (715)
Q Consensus 365 ~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~~KAeaaa~~L~~inP~v~v~~~~~ 444 (715)
.+|+|+|+|-+|..+|+.|...|. .++++|.|.-....+. ..+.
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g~-~v~vid~d~~~~~~~~----------------------------------~~i~- 392 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKPV-PFILIDRQESPVCNDH----------------------------------VVVY- 392 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTC-CEEEEESSCCSSCCSS----------------------------------CEEE-
T ss_pred CCEEEECCCHHHHHHHHHHHHCCC-CEEEEECChHHHhhcC----------------------------------CEEE-
Confidence 899999999999999999999995 5889998653211110 1222
Q ss_pred ccCCCCCCCCCccccccccchhhHH-HhhccCCEEEEeCCChHHHHHHHHHHHhcCCe
Q 005071 445 AIPMPGHPVPCQEEDSVLDDCRRLT-DLILSHDVIFLLTDTRESRWLPTLLCANTNKI 501 (715)
Q Consensus 445 ~Ipmpgh~~~~~~~~~~~~~~~~l~-~li~~~DvV~~~tDs~esR~li~~~~~~~~kp 501 (715)
|.+ .+.+.+. .-++++|.|+.++++-+.-.++...+++.+..
T Consensus 393 -----gD~----------t~~~~L~~agi~~ad~vi~~~~~d~~ni~~~~~ak~l~~~ 435 (565)
T 4gx0_A 393 -----GDA----------TVGQTLRQAGIDRASGIIVTTNDDSTNIFLTLACRHLHSH 435 (565)
T ss_dssp -----SCS----------SSSTHHHHHTTTSCSEEEECCSCHHHHHHHHHHHHHHCSS
T ss_pred -----eCC----------CCHHHHHhcCccccCEEEEECCCchHHHHHHHHHHHHCCC
Confidence 111 1223332 33789999999999999999999999998863
No 459
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=88.69 E-value=2 Score=42.75 Aligned_cols=76 Identities=14% Similarity=0.128 Sum_probs=47.2
Q ss_pred hhccCeEEEEcC-ChHHHHHHHHHHHhcCCeEEEEeCCcccccCCCcCCCCCcchhcCCCCcHHHHHHHHHHhhCCCcEE
Q 005071 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAA 439 (715)
Q Consensus 361 kL~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~~KAeaaa~~L~~inP~v~v 439 (715)
...+++|+|.|+ ||+|..+|+.|++.|. ++.++|.+.-..... ... -|+. ...-++.+.+.+.+.++.+.+
T Consensus 19 ~~m~k~vlITGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~--~~~---~d~~--d~~~v~~~~~~~~~~~g~iD~ 90 (251)
T 3orf_A 19 SHMSKNILVLGGSGALGAEVVKFFKSKSW-NTISIDFRENPNADH--SFT---IKDS--GEEEIKSVIEKINSKSIKVDT 90 (251)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCTTSSE--EEE---CSCS--SHHHHHHHHHHHHTTTCCEEE
T ss_pred cccCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCccccccc--ceE---EEeC--CHHHHHHHHHHHHHHcCCCCE
Confidence 334678999985 7899999999999996 488888765332211 111 1231 222345566666666776666
Q ss_pred EEEec
Q 005071 440 EGVVM 444 (715)
Q Consensus 440 ~~~~~ 444 (715)
-.+.-
T Consensus 91 li~~A 95 (251)
T 3orf_A 91 FVCAA 95 (251)
T ss_dssp EEECC
T ss_pred EEECC
Confidence 66554
No 460
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=88.64 E-value=0.38 Score=51.15 Aligned_cols=36 Identities=28% Similarity=0.486 Sum_probs=32.2
Q ss_pred HhhccCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 360 DILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 360 ~kL~~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
..|.+++|.|||+|.+|..+|+.|.+.|. +++.+|.
T Consensus 136 ~~l~g~tvGIIGlG~IG~~vA~~l~~~G~-~V~~~dr 171 (324)
T 3hg7_A 136 QGLKGRTLLILGTGSIGQHIAHTGKHFGM-KVLGVSR 171 (324)
T ss_dssp CCSTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECS
T ss_pred cccccceEEEEEECHHHHHHHHHHHhCCC-EEEEEcC
Confidence 47899999999999999999999999997 5777765
No 461
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=88.61 E-value=1.1 Score=45.35 Aligned_cols=31 Identities=23% Similarity=0.553 Sum_probs=26.8
Q ss_pred CeEEEEcC-ChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 365 RKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 365 ~kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
.||||.|+ |.+|..+++.|+..|. +++.+|.
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r 32 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVELGY-EVVVVDN 32 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-EEEEECC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCC-EEEEEeC
Confidence 37999998 9999999999999995 6777765
No 462
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=88.61 E-value=0.35 Score=48.50 Aligned_cols=34 Identities=15% Similarity=0.259 Sum_probs=30.2
Q ss_pred cCeEEEEcCChHHHHHHHHHHHhcC---CeEEEEeCC
Q 005071 364 SRKCLLLGAGTLGCQVARMLMAWGV---RKITLLDNG 397 (715)
Q Consensus 364 ~~kVlIvGaGgLGs~VA~~La~~GV---g~ItLVD~D 397 (715)
..||.|||+|.+|+.+|+.|++.|+ .+++++|.+
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~ 40 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPS 40 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSS
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCC
Confidence 3589999999999999999999995 689998875
No 463
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=88.59 E-value=0.39 Score=50.63 Aligned_cols=36 Identities=25% Similarity=0.350 Sum_probs=31.5
Q ss_pred HhhccCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 360 DILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 360 ~kL~~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
..+.+++|.|||+|.+|..+|+.|.+.|. +++.+|.
T Consensus 138 ~~l~g~~vgIIG~G~IG~~~A~~l~~~G~-~V~~~d~ 173 (313)
T 2ekl_A 138 LELAGKTIGIVGFGRIGTKVGIIANAMGM-KVLAYDI 173 (313)
T ss_dssp CCCTTCEEEEESCSHHHHHHHHHHHHTTC-EEEEECS
T ss_pred CCCCCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEECC
Confidence 46889999999999999999999999996 5667664
No 464
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=88.57 E-value=0.38 Score=49.28 Aligned_cols=33 Identities=30% Similarity=0.496 Sum_probs=30.1
Q ss_pred CeEEEEcCChHHHHHHHHHHHhcCCeEEEEeCCc
Q 005071 365 RKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGR 398 (715)
Q Consensus 365 ~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~D~ 398 (715)
..|+|||+|-.|+.+|..|++.|+ +++++|...
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~~G~-~V~vlE~~~ 35 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTAAGH-QVHLFDKSR 35 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTC-CEEEECSSS
T ss_pred ceEEEECCcHHHHHHHHHHHHCCC-cEEEEECCC
Confidence 579999999999999999999998 799999763
No 465
>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2
Probab=88.53 E-value=1.1 Score=49.62 Aligned_cols=34 Identities=18% Similarity=0.211 Sum_probs=27.6
Q ss_pred cCeEEEEcCChH-HHHHHHHHHH--hcC--CeEEEEeCC
Q 005071 364 SRKCLLLGAGTL-GCQVARMLMA--WGV--RKITLLDNG 397 (715)
Q Consensus 364 ~~kVlIvGaGgL-Gs~VA~~La~--~GV--g~ItLVD~D 397 (715)
..||.|||+|+. |..++..|+. -+. .+|+|+|.+
T Consensus 7 ~~KIaVIGaGsv~~~al~~~L~~~~~~l~~~ev~L~Di~ 45 (450)
T 1s6y_A 7 RLKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIP 45 (450)
T ss_dssp CEEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCG
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCCCCCCEEEEEEcC
Confidence 358999999999 7788888887 454 679999973
No 466
>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}
Probab=88.48 E-value=1.1 Score=44.69 Aligned_cols=32 Identities=25% Similarity=0.368 Sum_probs=27.2
Q ss_pred CeEEEEcC-ChHHHHHHHHHHHhcCCeEEEEeCC
Q 005071 365 RKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNG 397 (715)
Q Consensus 365 ~kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD~D 397 (715)
++|+|.|+ |++|+.+++.|+..| -+++++|..
T Consensus 3 ~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~ 35 (267)
T 3ay3_A 3 NRLLVTGAAGGVGSAIRPHLGTLA-HEVRLSDIV 35 (267)
T ss_dssp EEEEEESTTSHHHHHHGGGGGGTE-EEEEECCSS
T ss_pred ceEEEECCCCHHHHHHHHHHHhCC-CEEEEEeCC
Confidence 47999997 999999999999998 467776653
No 467
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=88.37 E-value=0.47 Score=53.06 Aligned_cols=35 Identities=26% Similarity=0.485 Sum_probs=31.8
Q ss_pred cCeEEEEcCChHHHHHHHHHHH---hcCCeEEEEeCCcc
Q 005071 364 SRKCLLLGAGTLGCQVARMLMA---WGVRKITLLDNGRV 399 (715)
Q Consensus 364 ~~kVlIvGaGgLGs~VA~~La~---~GVg~ItLVD~D~V 399 (715)
..+|+|||+|..|+.+|..|++ .|+ +++|+|.+.+
T Consensus 5 ~~dVvIVGgG~aGl~aA~~La~~~~~G~-~V~liE~~~~ 42 (538)
T 2aqj_A 5 IKNIVIVGGGTAGWMAASYLVRALQQQA-NITLIESAAI 42 (538)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCCSSC-EEEEEECSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhcCCCC-EEEEECCCCC
Confidence 4689999999999999999999 997 7999998764
No 468
>4ea9_A Perosamine N-acetyltransferase; beta helix, acetyl coenzyme A, GDP-perosa transferase; HET: JBT; 0.90A {Caulobacter vibrioides} PDB: 4ea8_A* 4ea7_A* 4eaa_A* 4eab_A*
Probab=88.32 E-value=2.6 Score=41.28 Aligned_cols=87 Identities=17% Similarity=0.149 Sum_probs=59.9
Q ss_pred ccCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeCCcccccCCCcCCCCCcchhcCCCCcHHHHHHHHHHhhCCCcEEEEE
Q 005071 363 SSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEGV 442 (715)
Q Consensus 363 ~~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~~KAeaaa~~L~~inP~v~v~~~ 442 (715)
..++++|+|||+.|..++..|...|..-+-|+|.+.-. +.+. | +.+-+
T Consensus 11 ~~k~v~IiGAGg~g~~v~~~l~~~~~~~vgfiDd~~~~------~~~~--------g-----------------~~Vlg- 58 (220)
T 4ea9_A 11 AIGGVVIIGGGGHAKVVIESLRACGETVAAIVDADPTR------RAVL--------G-----------------VPVVG- 58 (220)
T ss_dssp CSSCEEEECCSHHHHHHHHHHHHTTCCEEEEECSCC---------CBT--------T-----------------BCEEE-
T ss_pred CCCCEEEEcCCHHHHHHHHHHHhCCCEEEEEEeCCccc------CcCC--------C-----------------eeEEC-
Confidence 45689999999999999999999998889999976311 1010 1 12222
Q ss_pred ecccCCCCCCCCCccccccccchhhHHHhhcc-CCEEEEeCCChHHHHHHHHHHHhcCCeE
Q 005071 443 VMAIPMPGHPVPCQEEDSVLDDCRRLTDLILS-HDVIFLLTDTRESRWLPTLLCANTNKIT 502 (715)
Q Consensus 443 ~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~-~DvV~~~tDs~esR~li~~~~~~~~kp~ 502 (715)
..+.+.++.+. .+.++.+..+...|..+...+...+..+
T Consensus 59 ---------------------~~~~~~~~~~~~~~~v~iAIg~~~~R~~i~~~l~~~g~~~ 98 (220)
T 4ea9_A 59 ---------------------DDLALPMLREQGLSRLFVAIGDNRLRQKLGRKARDHGFSL 98 (220)
T ss_dssp ---------------------SGGGHHHHHHTTCCEEEECCCCHHHHHHHHHHHHHTTCEE
T ss_pred ---------------------CHHHHHHhhcccccEEEEecCCHHHHHHHHHHHHhcCCCc
Confidence 22334444433 4567889989899988888888887644
No 469
>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*
Probab=88.32 E-value=0.75 Score=46.39 Aligned_cols=31 Identities=29% Similarity=0.401 Sum_probs=26.3
Q ss_pred eEEEEcC-ChHHHHHHHHHHHhcCCeEEEEeCCc
Q 005071 366 KCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGR 398 (715)
Q Consensus 366 kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD~D~ 398 (715)
||+|.|+ |.+|+.+++.|+ .| -+++.+|...
T Consensus 2 ~ilVtGatG~iG~~l~~~L~-~g-~~V~~~~r~~ 33 (299)
T 1n2s_A 2 NILLFGKTGQVGWELQRSLA-PV-GNLIALDVHS 33 (299)
T ss_dssp EEEEECTTSHHHHHHHHHTT-TT-SEEEEECTTC
T ss_pred eEEEECCCCHHHHHHHHHhh-cC-CeEEEecccc
Confidence 7999997 999999999999 78 5777777643
No 470
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=88.29 E-value=0.71 Score=50.78 Aligned_cols=37 Identities=30% Similarity=0.441 Sum_probs=32.4
Q ss_pred hhccCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeCCc
Q 005071 361 ILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGR 398 (715)
Q Consensus 361 kL~~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~D~ 398 (715)
.++++||+|+|+|+.|-.+|+.|.+.| -+++..|...
T Consensus 6 ~~~~k~v~viG~G~sG~s~A~~l~~~G-~~V~~~D~~~ 42 (451)
T 3lk7_A 6 TFENKKVLVLGLARSGEAAARLLAKLG-AIVTVNDGKP 42 (451)
T ss_dssp TTTTCEEEEECCTTTHHHHHHHHHHTT-CEEEEEESSC
T ss_pred hcCCCEEEEEeeCHHHHHHHHHHHhCC-CEEEEEeCCc
Confidence 357899999999999999999999999 6788888743
No 471
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=88.26 E-value=0.42 Score=52.17 Aligned_cols=36 Identities=19% Similarity=0.343 Sum_probs=32.7
Q ss_pred hhccCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeCC
Q 005071 361 ILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNG 397 (715)
Q Consensus 361 kL~~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~D 397 (715)
.+...+|+|+|+|.+|..+++.+.+.|. +++++|..
T Consensus 169 ~l~g~~V~ViGaG~iG~~aa~~a~~~Ga-~V~v~D~~ 204 (401)
T 1x13_A 169 KVPPAKVMVIGAGVAGLAAIGAANSLGA-IVRAFDTR 204 (401)
T ss_dssp EECCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSC
T ss_pred CcCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCC
Confidence 4789999999999999999999999998 79998863
No 472
>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Probab=88.25 E-value=0.32 Score=54.84 Aligned_cols=35 Identities=26% Similarity=0.389 Sum_probs=27.3
Q ss_pred hhccCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 361 ILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 361 kL~~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
.+++++|+|+|+||+|..+|+.|+..|+ ++++++.
T Consensus 361 ~l~~k~vlV~GaGGig~aia~~L~~~G~-~V~i~~R 395 (523)
T 2o7s_A 361 PLASKTVVVIGAGGAGKALAYGAKEKGA-KVVIANR 395 (523)
T ss_dssp -----CEEEECCSHHHHHHHHHHHHHCC--CEEEES
T ss_pred ccCCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEEC
Confidence 3677899999999999999999999998 7888765
No 473
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=88.23 E-value=1.3 Score=46.44 Aligned_cols=34 Identities=21% Similarity=0.364 Sum_probs=29.1
Q ss_pred ccCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 363 SSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 363 ~~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
.+.+|+|+|+|++|..++..+..+|-.+++.+|.
T Consensus 171 ~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~ 204 (345)
T 3jv7_A 171 PGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDL 204 (345)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEES
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcC
Confidence 4679999999999999888888887778888765
No 474
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=88.20 E-value=0.33 Score=50.92 Aligned_cols=34 Identities=24% Similarity=0.487 Sum_probs=31.2
Q ss_pred cCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeCCc
Q 005071 364 SRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGR 398 (715)
Q Consensus 364 ~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~D~ 398 (715)
...|+|||+|..|+.+|..|++.|+ +++|+|.+.
T Consensus 4 ~~dVvIvG~G~aGl~~A~~La~~G~-~V~l~E~~~ 37 (397)
T 3cgv_A 4 TYDVLVVGGGPGGSTAARYAAKYGL-KTLMIEKRP 37 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTC-CEEEECSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCC-CEEEEeCCC
Confidence 4679999999999999999999997 799999876
No 475
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=88.18 E-value=1.3 Score=46.72 Aligned_cols=32 Identities=31% Similarity=0.454 Sum_probs=27.8
Q ss_pred eEEEEc-CChHHHHHHHHHHHh-cC-CeEEEEeCC
Q 005071 366 KCLLLG-AGTLGCQVARMLMAW-GV-RKITLLDNG 397 (715)
Q Consensus 366 kVlIvG-aGgLGs~VA~~La~~-GV-g~ItLVD~D 397 (715)
||.|+| +|.+|..+|..|+.- +. .+|.|+|.+
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~ 36 (312)
T 3hhp_A 2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIA 36 (312)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSS
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecC
Confidence 799999 899999999999876 54 689998874
No 476
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=88.14 E-value=1.6 Score=45.53 Aligned_cols=34 Identities=15% Similarity=0.153 Sum_probs=28.9
Q ss_pred CeEEEEcCC-hHHHHHHHHHHHhcCCeEEEEeCCc
Q 005071 365 RKCLLLGAG-TLGCQVARMLMAWGVRKITLLDNGR 398 (715)
Q Consensus 365 ~kVlIvGaG-gLGs~VA~~La~~GVg~ItLVD~D~ 398 (715)
.||.|||+| -+|...++.|...|+.-+.++|.+.
T Consensus 4 irvgiIG~gG~i~~~h~~~l~~~~~~lvav~d~~~ 38 (312)
T 3o9z_A 4 TRFALTGLAGYIAPRHLKAIKEVGGVLVASLDPAT 38 (312)
T ss_dssp CEEEEECTTSSSHHHHHHHHHHTTCEEEEEECSSC
T ss_pred eEEEEECCChHHHHHHHHHHHhCCCEEEEEEcCCH
Confidence 589999995 4999999999999987778888653
No 477
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=88.14 E-value=1 Score=47.73 Aligned_cols=33 Identities=9% Similarity=0.120 Sum_probs=24.6
Q ss_pred cCeEEEEcCChHHHHHHHHHHHh-cCCeEEEEeC
Q 005071 364 SRKCLLLGAGTLGCQVARMLMAW-GVRKITLLDN 396 (715)
Q Consensus 364 ~~kVlIvGaGgLGs~VA~~La~~-GVg~ItLVD~ 396 (715)
..||.|||+|.+|...++.|... ++.-+.++|.
T Consensus 6 ~~~vgiiG~G~ig~~~~~~l~~~~~~~lv~v~d~ 39 (362)
T 1ydw_A 6 QIRIGVMGCADIARKVSRAIHLAPNATISGVASR 39 (362)
T ss_dssp CEEEEEESCCTTHHHHHHHHHHCTTEEEEEEECS
T ss_pred ceEEEEECchHHHHHHHHHHhhCCCcEEEEEEcC
Confidence 35899999999999999999875 3333345553
No 478
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=88.13 E-value=0.98 Score=47.98 Aligned_cols=34 Identities=15% Similarity=0.224 Sum_probs=25.6
Q ss_pred ccCeEEEEcCChHHHHHHHHHHHh-cCCeEEEEeC
Q 005071 363 SSRKCLLLGAGTLGCQVARMLMAW-GVRKITLLDN 396 (715)
Q Consensus 363 ~~~kVlIvGaGgLGs~VA~~La~~-GVg~ItLVD~ 396 (715)
+..||.|||+|.+|...++.|... |+.-..++|.
T Consensus 4 ~~~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~ 38 (359)
T 3e18_A 4 KKYQLVIVGYGGMGSYHVTLASAADNLEVHGVFDI 38 (359)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHTSTTEEEEEEECS
T ss_pred CcCcEEEECcCHHHHHHHHHHHhCCCcEEEEEEcC
Confidence 346899999999999999999876 4333345554
No 479
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=88.12 E-value=1.1 Score=45.97 Aligned_cols=31 Identities=13% Similarity=0.341 Sum_probs=25.7
Q ss_pred cCeEEEEc-CChHHHHHHHHHHHhcCCeEEEEe
Q 005071 364 SRKCLLLG-AGTLGCQVARMLMAWGVRKITLLD 395 (715)
Q Consensus 364 ~~kVlIvG-aGgLGs~VA~~La~~GVg~ItLVD 395 (715)
+++|||.| +|.+|+.+++.|+..|. +++.++
T Consensus 9 ~~~vlVTGatGfIG~~l~~~Ll~~G~-~V~~~~ 40 (338)
T 2rh8_A 9 KKTACVVGGTGFVASLLVKLLLQKGY-AVNTTV 40 (338)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHTTC-EEEEEE
T ss_pred CCEEEEECCchHHHHHHHHHHHHCCC-EEEEEE
Confidence 57899999 69999999999999995 455443
No 480
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=88.11 E-value=1.1 Score=46.88 Aligned_cols=88 Identities=11% Similarity=0.180 Sum_probs=53.5
Q ss_pred CeEEEEcCChHHHHHHHHHHHhcCC---eEEEEeCCcccccCCCcCCCCCcchhcCCCCcHHHHHHHHHHhhCCCcEEEE
Q 005071 365 RKCLLLGAGTLGCQVARMLMAWGVR---KITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEG 441 (715)
Q Consensus 365 ~kVlIvGaGgLGs~VA~~La~~GVg---~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~~KAeaaa~~L~~inP~v~v~~ 441 (715)
.||.|||+|.+|...++.|...+-. -+.++|. ...|++.++++..- | ..
T Consensus 3 ~rigiiG~G~ig~~~~~~l~~~~~~~~~l~av~d~----------------------~~~~a~~~a~~~~~--~----~~ 54 (334)
T 3ohs_X 3 LRWGIVSVGLISSDFTAVLQTLPRSEHQVVAVAAR----------------------DLSRAKEFAQKHDI--P----KA 54 (334)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSCTTTEEEEEEECS----------------------SHHHHHHHHHHHTC--S----CE
T ss_pred cEEEEECchHHHHHHHHHHHhCCCCCeEEEEEEcC----------------------CHHHHHHHHHHcCC--C----cc
Confidence 4899999999999999998866422 2233332 22355555444310 0 01
Q ss_pred EecccCCCCCCCCCccccccccchhhHHHhhc--cCCEEEEeCCChHHHHHHHHHHHhcCCeEEE
Q 005071 442 VVMAIPMPGHPVPCQEEDSVLDDCRRLTDLIL--SHDVIFLLTDTRESRWLPTLLCANTNKITIT 504 (715)
Q Consensus 442 ~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~--~~DvV~~~tDs~esR~li~~~~~~~~kp~I~ 504 (715)
..+.+++++ +.|+|+.||-+. ...-+...|.+.||+++.
T Consensus 55 -----------------------~~~~~~ll~~~~vD~V~i~tp~~-~H~~~~~~al~~GkhVl~ 95 (334)
T 3ohs_X 55 -----------------------YGSYEELAKDPNVEVAYVGTQHP-QHKAAVMLCLAAGKAVLC 95 (334)
T ss_dssp -----------------------ESSHHHHHHCTTCCEEEECCCGG-GHHHHHHHHHHTTCEEEE
T ss_pred -----------------------cCCHHHHhcCCCCCEEEECCCcH-HHHHHHHHHHhcCCEEEE
Confidence 123345554 588888888653 445556667788887764
No 481
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=88.05 E-value=0.43 Score=50.02 Aligned_cols=35 Identities=29% Similarity=0.397 Sum_probs=31.2
Q ss_pred CeEEEEcCChHHHHHHHHHHHhcCCeEEEEeCCccc
Q 005071 365 RKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVA 400 (715)
Q Consensus 365 ~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~D~Ve 400 (715)
..|+|||+|-.|+.+|..|++.|. +++++|.+.+-
T Consensus 4 ~dvvIIGaG~~Gl~~A~~La~~G~-~V~vie~~~~~ 38 (389)
T 2gf3_A 4 FDVIVVGAGSMGMAAGYQLAKQGV-KTLLVDAFDPP 38 (389)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTC-CEEEECSSCSS
T ss_pred CCEEEECCCHHHHHHHHHHHhCCC-eEEEEeCCCCC
Confidence 479999999999999999999996 69999987653
No 482
>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*
Probab=88.04 E-value=1.9 Score=48.31 Aligned_cols=34 Identities=29% Similarity=0.456 Sum_probs=29.8
Q ss_pred cCeEEEEc-CChHHHHHHHHHHHhcCCeEEEEeCC
Q 005071 364 SRKCLLLG-AGTLGCQVARMLMAWGVRKITLLDNG 397 (715)
Q Consensus 364 ~~kVlIvG-aGgLGs~VA~~La~~GVg~ItLVD~D 397 (715)
+++|+|.| .||||..+|+.|++.|..++.+++..
T Consensus 239 ~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~ 273 (496)
T 3mje_A 239 HGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRR 273 (496)
T ss_dssp CSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESS
T ss_pred CCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCC
Confidence 36788886 78999999999999999999998763
No 483
>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}
Probab=87.99 E-value=2.8 Score=41.58 Aligned_cols=76 Identities=17% Similarity=0.113 Sum_probs=47.5
Q ss_pred hccCeEEEEcC-ChHHHHHHHHHHHhcCCeEEEEeCCcccccCCCcCCCCCcchhcCCCCc-HHHHHHHHHHhhCCCcEE
Q 005071 362 LSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDF-KAMAAVKSLERIFPAVAA 439 (715)
Q Consensus 362 L~~~kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~~-KAeaaa~~L~~inP~v~v 439 (715)
+++++|+|.|+ ||+|..+|+.|++.|. +++++|.+.- ..... ..+-.-|+ ..+ -++.+.+.+.+.+..+++
T Consensus 5 l~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~-~~~~~--~~~~~~D~---~d~~~~~~~~~~~~~~~g~id~ 77 (250)
T 2fwm_X 5 FSGKNVWVTGAGKGIGYATALAFVEAGA-KVTGFDQAFT-QEQYP--FATEVMDV---ADAAQVAQVCQRLLAETERLDA 77 (250)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCCC-SSCCS--SEEEECCT---TCHHHHHHHHHHHHHHCSCCCE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCchh-hhcCC--ceEEEcCC---CCHHHHHHHHHHHHHHcCCCCE
Confidence 56788999985 8999999999999995 6888887532 11111 22223455 222 344555555555655665
Q ss_pred EEEec
Q 005071 440 EGVVM 444 (715)
Q Consensus 440 ~~~~~ 444 (715)
-.+.-
T Consensus 78 lv~~A 82 (250)
T 2fwm_X 78 LVNAA 82 (250)
T ss_dssp EEECC
T ss_pred EEECC
Confidence 55543
No 484
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=87.98 E-value=0.37 Score=50.14 Aligned_cols=35 Identities=29% Similarity=0.606 Sum_probs=31.7
Q ss_pred cCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeCCc
Q 005071 364 SRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGR 398 (715)
Q Consensus 364 ~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~D~ 398 (715)
..+|+|||+|..|..+|..|++.|..+++++|.+.
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~ 38 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGT 38 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred cCcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCC
Confidence 45899999999999999999999976899999874
No 485
>3r4v_A Putative uncharacterized protein; tubulin, unknown function; HET: GDP; 1.67A {Pseudomonas phage 201phi2-1} PDB: 3rb8_A*
Probab=87.91 E-value=0.27 Score=51.70 Aligned_cols=106 Identities=21% Similarity=0.139 Sum_probs=64.8
Q ss_pred CeEEEEcCChHHHHHHHHHHHhcCCeEEEEeCCcccccCCCcC--CCCCcchhcCCCCcHHHHHHHHHHhhCCCcEEEEE
Q 005071 365 RKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQ--SLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEGV 442 (715)
Q Consensus 365 ~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~D~Ve~sNl~RQ--~L~~~~Di~~~G~~KAeaaa~~L~~inP~v~v~~~ 442 (715)
.|+.|+||||-||.++..|...| .....+|.|.-.+....++ .+.+..-.-.||-|+ .+++..
T Consensus 3 vki~VvGvGGAG~Nii~rL~~~G-a~~iAiNTD~q~L~~~k~~~~~~i~~gglGAGgdpe--~g~e~a------------ 67 (315)
T 3r4v_A 3 VKVCLIFAGGTGMNVATKLVDLG-EAVHCFDTCDKNVVDVHRSVNVTLTKGTRGAGGNRK--VILPLV------------ 67 (315)
T ss_dssp BSCEEEEEHHHHHHHHGGGGGGG-GGEEEEESSSTTCCGGGGGSEEEECTTCCC---CHH--HHHHHH------------
T ss_pred ceEEEEEEcCcchHHHHHHHHcC-CCEEEEECchHHhhhhhhhcceeeecccCCCCCChH--HHHHHH------------
Confidence 57899999999999999999999 6778888887665444333 111111010123333 222221
Q ss_pred ecccCCCCCCCCCccccccccchhhHHHhhccCCEEEEeCC------ChHHHHHHHHHHHhcCCeEEEe
Q 005071 443 VMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTD------TRESRWLPTLLCANTNKITITA 505 (715)
Q Consensus 443 ~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tD------s~esR~li~~~~~~~~kp~I~a 505 (715)
+...+.+.+.+++.|+||.+.. +-.+ -.+.+++++.+.++|..
T Consensus 68 -------------------~e~~~eI~~~l~~aD~VFVtaGLGGGTGTGaA-PVvAeiake~GalvVav 116 (315)
T 3r4v_A 68 -------------------RPQIPALMDTIPEADFYIVCYSLGGGSGSVLG-PLITGQLADRKASFVSF 116 (315)
T ss_dssp -------------------GGGHHHHHHTSCCBSCEEEEEESSSSSHHHHH-HHHHHHHHHTTCCEEEE
T ss_pred -------------------HhhHHHHHHhcCCCCEEEEEeccCCccccchH-HHHHHHHHHcCCCEEEE
Confidence 2244566677888898887643 2222 34557778888877754
No 486
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=87.90 E-value=0.38 Score=51.11 Aligned_cols=36 Identities=33% Similarity=0.596 Sum_probs=32.0
Q ss_pred HhhccCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 360 DILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 360 ~kL~~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
..|.+++|.|||+|.+|..+|+.|.+.|. +++.+|.
T Consensus 142 ~~l~g~~vgIIG~G~iG~~vA~~l~~~G~-~V~~~d~ 177 (333)
T 2d0i_A 142 ESLYGKKVGILGMGAIGKAIARRLIPFGV-KLYYWSR 177 (333)
T ss_dssp CCSTTCEEEEECCSHHHHHHHHHHGGGTC-EEEEECS
T ss_pred CCCCcCEEEEEccCHHHHHHHHHHHHCCC-EEEEECC
Confidence 46889999999999999999999999996 6777775
No 487
>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2
Probab=87.89 E-value=2.2 Score=44.39 Aligned_cols=32 Identities=22% Similarity=0.402 Sum_probs=27.1
Q ss_pred CeEEEEcC-ChHHHHHHHHHHHhcCCeEEEEeCC
Q 005071 365 RKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNG 397 (715)
Q Consensus 365 ~kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD~D 397 (715)
++|+|.|+ |++|+.+++.|+..|. +++++|.+
T Consensus 2 ~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~ 34 (372)
T 1db3_A 2 KVALITGVTGQDGSYLAEFLLEKGY-EVHGIKRR 34 (372)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-EEEEECC-
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC-EEEEEECC
Confidence 57999985 9999999999999994 78887753
No 488
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=87.85 E-value=0.48 Score=50.27 Aligned_cols=36 Identities=14% Similarity=0.292 Sum_probs=31.8
Q ss_pred HhhccCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 360 DILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 360 ~kL~~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
..|.+++|.|||+|.+|..+|+.|...|. +++.+|.
T Consensus 146 ~~l~g~~vgIIG~G~iG~~iA~~l~~~G~-~V~~~d~ 181 (334)
T 2dbq_A 146 YDVYGKTIGIIGLGRIGQAIAKRAKGFNM-RILYYSR 181 (334)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECS
T ss_pred cCCCCCEEEEEccCHHHHHHHHHHHhCCC-EEEEECC
Confidence 36889999999999999999999999996 6777775
No 489
>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*
Probab=87.84 E-value=0.57 Score=49.92 Aligned_cols=77 Identities=19% Similarity=0.188 Sum_probs=54.3
Q ss_pred CeEEEEc-CChHHHHHHHHHHHhcC-Ce-----EEEEeCCcccccCCCcCCCCCcchhcCCCCcHHHHHHHHHHhh-CCC
Q 005071 365 RKCLLLG-AGTLGCQVARMLMAWGV-RK-----ITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERI-FPA 436 (715)
Q Consensus 365 ~kVlIvG-aGgLGs~VA~~La~~GV-g~-----ItLVD~D~Ve~sNl~RQ~L~~~~Di~~~G~~KAeaaa~~L~~i-nP~ 436 (715)
.||+|+| +|.+|+.+|..|+..|+ ++ |.|+|... .+.|++..+.-|... .|.
T Consensus 4 ~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~--------------------~~~~~~g~a~DL~~~~~~~ 63 (333)
T 5mdh_A 4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITP--------------------MMGVLDGVLMELQDCALPL 63 (333)
T ss_dssp EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGG--------------------GHHHHHHHHHHHHHTCCTT
T ss_pred eEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCC--------------------ccccchhhHhhhHhhhhcc
Confidence 4899999 79999999999999887 45 88888731 134677777778775 365
Q ss_pred cEEEEEecccCCCCCCCCCccccccccchhhHHHhhccCCEEEEeCC
Q 005071 437 VAAEGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTD 483 (715)
Q Consensus 437 v~v~~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tD 483 (715)
+ ..+. ......+-++++|+||-+..
T Consensus 64 ~--~~~~--------------------~~~~~~~~~~daDvVvitAg 88 (333)
T 5mdh_A 64 L--KDVI--------------------ATDKEEIAFKDLDVAILVGS 88 (333)
T ss_dssp E--EEEE--------------------EESCHHHHTTTCSEEEECCS
T ss_pred c--CCEE--------------------EcCCcHHHhCCCCEEEEeCC
Confidence 3 2221 11234456789999998764
No 490
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=87.84 E-value=0.83 Score=46.61 Aligned_cols=31 Identities=35% Similarity=0.500 Sum_probs=25.8
Q ss_pred CeEEEEcCChHHHHHHHHHHHhcCCeEEE-EeC
Q 005071 365 RKCLLLGAGTLGCQVARMLMAWGVRKITL-LDN 396 (715)
Q Consensus 365 ~kVlIvGaGgLGs~VA~~La~~GVg~ItL-VD~ 396 (715)
.||+|+|+|..|..+++.+...+- .|.- +|.
T Consensus 4 mkI~ViGaGrMG~~i~~~l~~~~~-eLva~~d~ 35 (243)
T 3qy9_A 4 MKILLIGYGAMNQRVARLAEEKGH-EIVGVIEN 35 (243)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEEECS
T ss_pred eEEEEECcCHHHHHHHHHHHhCCC-EEEEEEec
Confidence 589999999999999999998875 6553 454
No 491
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=87.83 E-value=1.7 Score=48.20 Aligned_cols=39 Identities=15% Similarity=-0.005 Sum_probs=30.9
Q ss_pred hHHHhhc--cCCEEEEeCCChHHHHHHHHHHHhcCCeEEEe
Q 005071 467 RLTDLIL--SHDVIFLLTDTRESRWLPTLLCANTNKITITA 505 (715)
Q Consensus 467 ~l~~li~--~~DvV~~~tDs~esR~li~~~~~~~~kp~I~a 505 (715)
+.+++++ +.|+|++||-+.+...-+...|.+.||.++..
T Consensus 98 D~eeLL~d~dIDaVviaTp~p~~H~e~a~~AL~AGKHVv~~ 138 (446)
T 3upl_A 98 DNDLILSNPLIDVIIDATGIPEVGAETGIAAIRNGKHLVMM 138 (446)
T ss_dssp CHHHHHTCTTCCEEEECSCCHHHHHHHHHHHHHTTCEEEEC
T ss_pred CHHHHhcCCCCCEEEEcCCChHHHHHHHHHHHHcCCcEEec
Confidence 4456665 58999999988776677788899999998853
No 492
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=87.75 E-value=0.52 Score=52.99 Aligned_cols=35 Identities=34% Similarity=0.403 Sum_probs=31.8
Q ss_pred cCeEEEEcCChHHHHHHHHHHH---hcCCeEEEEeCCcc
Q 005071 364 SRKCLLLGAGTLGCQVARMLMA---WGVRKITLLDNGRV 399 (715)
Q Consensus 364 ~~kVlIvGaGgLGs~VA~~La~---~GVg~ItLVD~D~V 399 (715)
..+|+|||+|..|+.+|..|++ .|+ +++|||.+.+
T Consensus 25 ~~dVvIVGgG~aGl~aA~~La~~~~~G~-~V~liE~~~~ 62 (550)
T 2e4g_A 25 IDKILIVGGGTAGWMAASYLGKALQGTA-DITLLQAPDI 62 (550)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTTTSS-EEEEEECCCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCC-cEEEEeCCCC
Confidence 5689999999999999999999 886 8999998754
No 493
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=87.61 E-value=1.6 Score=44.46 Aligned_cols=36 Identities=25% Similarity=0.262 Sum_probs=27.4
Q ss_pred hhccCeEEEEc-CChHHHHHHHHHHHhcCCeEEEEeCC
Q 005071 361 ILSSRKCLLLG-AGTLGCQVARMLMAWGVRKITLLDNG 397 (715)
Q Consensus 361 kL~~~kVlIvG-aGgLGs~VA~~La~~GVg~ItLVD~D 397 (715)
.-+.++|||.| .|++|+.+++.|+..|. +++++|..
T Consensus 9 ~~~~~~vlVTGatG~iG~~l~~~L~~~G~-~V~~~~r~ 45 (321)
T 2pk3_A 9 HHGSMRALITGVAGFVGKYLANHLTEQNV-EVFGTSRN 45 (321)
T ss_dssp ----CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred ccCcceEEEECCCChHHHHHHHHHHHCCC-EEEEEecC
Confidence 44678899997 58999999999999995 77777753
No 494
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=87.59 E-value=0.43 Score=49.24 Aligned_cols=36 Identities=28% Similarity=0.600 Sum_probs=31.6
Q ss_pred cCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeCC-ccc
Q 005071 364 SRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNG-RVA 400 (715)
Q Consensus 364 ~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~D-~Ve 400 (715)
...|+|||+|..|+.+|..|++.|. +++++|.+ .+.
T Consensus 4 ~~dvvIIG~G~~Gl~~A~~La~~G~-~V~vlE~~~~~~ 40 (369)
T 3dme_A 4 DIDCIVIGAGVVGLAIARALAAGGH-EVLVAEAAEGIG 40 (369)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTC-CEEEECSSSSSS
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCC-eEEEEeCCCCCC
Confidence 3579999999999999999999997 79999987 344
No 495
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=87.57 E-value=0.41 Score=52.90 Aligned_cols=34 Identities=35% Similarity=0.594 Sum_probs=29.5
Q ss_pred CeEEEEcCChHHHHHHHHHHH---hcCCeEEEEeCCcc
Q 005071 365 RKCLLLGAGTLGCQVARMLMA---WGVRKITLLDNGRV 399 (715)
Q Consensus 365 ~kVlIvGaGgLGs~VA~~La~---~GVg~ItLVD~D~V 399 (715)
.+|+|||+|..|+.+|..|++ .|+ +++|||.+.+
T Consensus 3 ~dVvIVGgG~aGl~~A~~La~~~~~G~-~V~lvE~~~~ 39 (511)
T 2weu_A 3 RSVVIVGGGTAGWMTASYLKAAFDDRI-DVTLVESGNV 39 (511)
T ss_dssp CEEEEECCHHHHHHHHHHHHHHHGGGS-EEEEEEC---
T ss_pred ceEEEECCCHHHHHHHHHHHhhcCCCC-EEEEEecCCC
Confidence 579999999999999999999 998 8999998754
No 496
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=87.53 E-value=1.1 Score=46.96 Aligned_cols=32 Identities=22% Similarity=0.294 Sum_probs=28.2
Q ss_pred CeEEEEcC-ChHHHHHHHHHHHhcCC------eEEEEeC
Q 005071 365 RKCLLLGA-GTLGCQVARMLMAWGVR------KITLLDN 396 (715)
Q Consensus 365 ~kVlIvGa-GgLGs~VA~~La~~GVg------~ItLVD~ 396 (715)
.||+|+|+ |.+|+.++..|+..|.. +++++|.
T Consensus 5 mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~ 43 (327)
T 1y7t_A 5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEI 43 (327)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeC
Confidence 48999997 99999999999998863 8999886
No 497
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=87.51 E-value=0.55 Score=46.47 Aligned_cols=33 Identities=33% Similarity=0.517 Sum_probs=29.9
Q ss_pred cCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeCC
Q 005071 364 SRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNG 397 (715)
Q Consensus 364 ~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~D 397 (715)
..+|+|||+|..|+.+|..|++.|+ +++++|..
T Consensus 3 ~~dVvVVGgG~aGl~aA~~la~~g~-~v~lie~~ 35 (232)
T 2cul_A 3 AYQVLIVGAGFSGAETAFWLAQKGV-RVGLLTQS 35 (232)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTC-CEEEEESC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCC-CEEEEecC
Confidence 4689999999999999999999996 68888875
No 498
>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*
Probab=87.41 E-value=1 Score=46.43 Aligned_cols=30 Identities=30% Similarity=0.591 Sum_probs=25.5
Q ss_pred eEEEEcC-ChHHHHHHHHHHHhcCCeEEEEeC
Q 005071 366 KCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (715)
Q Consensus 366 kVlIvGa-GgLGs~VA~~La~~GVg~ItLVD~ 396 (715)
+|+|.|+ |++|+.+++.|+..|. +++++|.
T Consensus 2 ~vlVTGatG~iG~~l~~~L~~~G~-~V~~~~~ 32 (338)
T 1udb_A 2 RVLVTGGSGYIGSHTCVQLLQNGH-DVIILDN 32 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTC-EEEEEEC
T ss_pred EEEEECCCCHHHHHHHHHHHHCCC-EEEEEec
Confidence 6999985 9999999999999995 5666664
No 499
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=87.38 E-value=0.47 Score=50.57 Aligned_cols=36 Identities=22% Similarity=0.593 Sum_probs=31.9
Q ss_pred hccCeEEEEcCChHHHHHHHHHHHhcCCeEEEEeCCc
Q 005071 362 LSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGR 398 (715)
Q Consensus 362 L~~~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~D~ 398 (715)
....+|+|||+|-.|+.+|..|++.|+ +++++|...
T Consensus 24 ~~~~dV~IVGaG~aGl~~A~~L~~~G~-~v~v~E~~~ 59 (398)
T 2xdo_A 24 LSDKNVAIIGGGPVGLTMAKLLQQNGI-DVSVYERDN 59 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTC-EEEEEECSS
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCC-CEEEEeCCC
Confidence 345789999999999999999999997 799999763
No 500
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=87.32 E-value=0.39 Score=50.08 Aligned_cols=34 Identities=15% Similarity=0.342 Sum_probs=30.9
Q ss_pred CeEEEEcCChHHHHHHHHHHHhcCCeEEEEeCCcc
Q 005071 365 RKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRV 399 (715)
Q Consensus 365 ~kVlIvGaGgLGs~VA~~La~~GVg~ItLVD~D~V 399 (715)
..|+|||+|-.|+.+|..|++.|. +++++|.+..
T Consensus 3 ~dvvIIG~Gi~Gl~~A~~La~~G~-~V~vle~~~~ 36 (372)
T 2uzz_A 3 YDLIIIGSGSVGAAAGYYATRAGL-NVLMTDAHMP 36 (372)
T ss_dssp EEEEESCTTHHHHHHHHHHHHTTC-CEEEECSSCS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCC
Confidence 479999999999999999999996 6999998754
Done!