BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005072
(715 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3QFR|A Chain A, Crystal Structure Of Human Nadph-Cytochrome P450 Reductase
(R457h Mutant)
pdb|3QFR|B Chain B, Crystal Structure Of Human Nadph-Cytochrome P450 Reductase
(R457h Mutant)
Length = 618
Score = 422 bits (1085), Expect = e-118, Method: Compositional matrix adjust.
Identities = 235/621 (37%), Positives = 351/621 (56%), Gaps = 32/621 (5%)
Query: 105 QKVTIFFGTQTGTAEGFAKALADEARARYDKAIFKVVXXXXXXXXXXXXXXKLKKENIVF 164
+ + +F+G+QTGTAE FA L+ +A RY + + +V
Sbjct: 19 RNIIVFYGSQTGTAEEFANRLSKDAH-RY--GMRGMSADPEEYDLADLSSLPEIDNALVV 75
Query: 165 FFLATYGDGEPTDNAARFYKWFTEQKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEI 224
F +ATYG+G+PTDNA FY W E L +K+ VFGLGN+ YEHFN + K VD+
Sbjct: 76 FCMATYGEGDPTDNAQDFYDWLQETDVD---LSGVKFAVFGLGNKTYEHFNAMGKYVDKR 132
Query: 225 LANQGAKRLVPVGLGDDDQCIEDDFSAWRELVWPELDNLLRDDDDPTTVSTPYTAAISEY 284
L GA+R+ +GLGDDD +E+DF WRE WP + +T ++I +Y
Sbjct: 133 LEQLGAQRIFELGLGDDDGNLEEDFITWREQFWPAVCEHF------GVEATGEESSIRQY 186
Query: 285 RVVFYDNADAS---VGE----KSWGNANGHAVYDAQHPCRSNVAVRKELHTPSSDRSCTH 337
+V + + DA+ +GE KS+ N +DA++P + V ++L+ ++R H
Sbjct: 187 ELVVHTDIDAAKVYMGEMGRLKSYENQK--PPFDAKNPFLAAVTTNRKLNQ-GTERHLMH 243
Query: 338 LEFDIAGTGLTYETGDHVGVYCENLSETVEEALSLLGLSPDTYFSLHTDKEDGTPLGKST 397
LE DI+ + + YE+GDHV VY N S V + +LG D SL+ E+ S
Sbjct: 244 LELDISDSKIRYESGDHVAVYPANDSALVNQLGKILGADLDVVMSLNNLDEE------SN 297
Query: 398 LPPTFP-PCSLRTALTKYXXXXXXXXXXXXXXXXXXXXXXTEADRLRHLASPA--GKDEY 454
FP P S RTALT Y +E + LR +AS + GK+ Y
Sbjct: 298 KKHPFPCPTSYRTALTYYLDITNPPRTNVLYELAQYASEPSEQELLRKMASSSGEGKELY 357
Query: 455 AQWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCAL 514
W+V ++R +L ++ + PS +PP+ ++PRLQ YYSI+SS +V P+ +H+ +
Sbjct: 358 LSWVVEARRHILAILQDCPSLRPPID-HLCELLPRLQAHYYSIASSSKVHPNSVHICAVV 416
Query: 515 VYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQSNFKLPADAKVPIIMIGPGT 574
V +T GR++KG+ + W++ P ++ + P+FVR+S F+LP A P+IM+GPGT
Sbjct: 417 VEYETKAGRINKGVATNWLRAKEPAGENGGRALVPMFVRKSQFRLPFKATTPVIMVGPGT 476
Query: 575 GLAPFRGFLQERFALQEAGAELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAF 634
G+APF GF+QER L++ G E+G +LL++GCR DY+Y +EL F + GAL+QL VAF
Sbjct: 477 GVAPFIGFIQERAWLRQQGKEVGETLLYYGCRRSDEDYLYREELAQFHRDGALTQLNVAF 536
Query: 635 SREGPTKEYVQHKMMEKSSDIWNMLSEGAYLYVCGDAKSMARDVHRTLHTIVQEQGSLDS 694
SRE K YVQH + + +W ++ GA++YVCGDA++MARDV T + IV E G+++
Sbjct: 537 SREQSHKVYVQHLLKQDREHLWKLIEGGAHIYVCGDARNMARDVQNTFYDIVAELGAMEH 596
Query: 695 SKAESMVKNLQMTGRYLRDVW 715
++A +K L GRY DVW
Sbjct: 597 AQAVDYIKKLMTKGRYSLDVW 617
>pdb|3QE2|A Chain A, Crystal Structure Of Human Nadph-Cytochrome P450 Reductase
pdb|3QE2|B Chain B, Crystal Structure Of Human Nadph-Cytochrome P450 Reductase
Length = 618
Score = 422 bits (1084), Expect = e-118, Method: Compositional matrix adjust.
Identities = 236/621 (38%), Positives = 353/621 (56%), Gaps = 32/621 (5%)
Query: 105 QKVTIFFGTQTGTAEGFAKALADEARARYDKAIFKVVXXXXXXXXXXXXXXKLKKENIVF 164
+ + +F+G+QTGTAE FA L+ +A RY + + +V
Sbjct: 19 RNIIVFYGSQTGTAEEFANRLSKDAH-RY--GMRGMSADPEEYDLADLSSLPEIDNALVV 75
Query: 165 FFLATYGDGEPTDNAARFYKWFTEQKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEI 224
F +ATYG+G+PTDNA FY W E L +K+ VFGLGN+ YEHFN + K VD+
Sbjct: 76 FCMATYGEGDPTDNAQDFYDWLQETDVD---LSGVKFAVFGLGNKTYEHFNAMGKYVDKR 132
Query: 225 LANQGAKRLVPVGLGDDDQCIEDDFSAWRELVWPELDNLLRDDDDPTTVSTPYTAAISEY 284
L GA+R+ +GLGDDD +E+DF WRE W L + +T ++I +Y
Sbjct: 133 LEQLGAQRIFELGLGDDDGNLEEDFITWREQFW------LAVCEHFGVEATGEESSIRQY 186
Query: 285 RVVFYDNADAS---VGE----KSWGNANGHAVYDAQHPCRSNVAVRKELHTPSSDRSCTH 337
+V + + DA+ +GE KS+ N +DA++P + V ++L+ ++R H
Sbjct: 187 ELVVHTDIDAAKVYMGEMGRLKSYENQK--PPFDAKNPFLAAVTTNRKLNQ-GTERHLMH 243
Query: 338 LEFDIAGTGLTYETGDHVGVYCENLSETVEEALSLLGLSPDTYFSLHTDKEDGTPLGKST 397
LE DI+ + + YE+GDHV VY N S V + +LG D SL+ E+ S
Sbjct: 244 LELDISDSKIRYESGDHVAVYPANDSALVNQLGKILGADLDVVMSLNNLDEE------SN 297
Query: 398 LPPTFP-PCSLRTALTKYXXXXXXXXXXXXXXXXXXXXXXTEADRLRHLASPA--GKDEY 454
FP P S RTALT Y +E + LR +AS + GK+ Y
Sbjct: 298 KKHPFPCPTSYRTALTYYLDITNPPRTNVLYELAQYASEPSEQELLRKMASSSGEGKELY 357
Query: 455 AQWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCAL 514
W+V ++R +L ++ + PS +PP+ ++PRLQ RYYSI+SS +V P+ +H+ +
Sbjct: 358 LSWVVEARRHILAILQDCPSLRPPID-HLCELLPRLQARYYSIASSSKVHPNSVHICAVV 416
Query: 515 VYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQSNFKLPADAKVPIIMIGPGT 574
V +T GR++KG+ + W++ P+ ++ + P+FVR+S F+LP A P+IM+GPGT
Sbjct: 417 VEYETKAGRINKGVATNWLRAKEPVGENGGRALVPMFVRKSQFRLPFKATTPVIMVGPGT 476
Query: 575 GLAPFRGFLQERFALQEAGAELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAF 634
G+APF GF+QER L++ G E+G +LL++GCR DY+Y +EL F + GAL+QL VAF
Sbjct: 477 GVAPFIGFIQERAWLRQQGKEVGETLLYYGCRRSDEDYLYREELAQFHRDGALTQLNVAF 536
Query: 635 SREGPTKEYVQHKMMEKSSDIWNMLSEGAYLYVCGDAKSMARDVHRTLHTIVQEQGSLDS 694
SRE K YVQH + + +W ++ GA++YVCGDA++MARDV T + IV E G+++
Sbjct: 537 SREQSHKVYVQHLLKQDREHLWKLIEGGAHIYVCGDARNMARDVQNTFYDIVAELGAMEH 596
Query: 695 SKAESMVKNLQMTGRYLRDVW 715
++A +K L GRY DVW
Sbjct: 597 AQAVDYIKKLMTKGRYSLDVW 617
>pdb|1AMO|A Chain A, Three-Dimensional Structure Of Nadph-Cytochrome P450
Reductase: Prototype For Fmn-And Fad-Containing Enzymes
pdb|1AMO|B Chain B, Three-Dimensional Structure Of Nadph-Cytochrome P450
Reductase: Prototype For Fmn-And Fad-Containing Enzymes
Length = 615
Score = 421 bits (1081), Expect = e-117, Method: Compositional matrix adjust.
Identities = 234/622 (37%), Positives = 352/622 (56%), Gaps = 33/622 (5%)
Query: 105 QKVTIFFGTQTGTAEGFAKALADEARARYDKAIFKVVXXXXXXXXXXXXXXKLKKENIVF 164
+ + +F+G+QTGTAE FA L+ +A RY + + +++V
Sbjct: 15 RNIIVFYGSQTGTAEEFANRLSKDAH-RY--GMRGMSADPEEYDLADLSSLPEIDKSLVV 71
Query: 165 FFLATYGDGEPTDNAARFYKWFTEQKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEI 224
F +ATYG+G+PTDNA FY W E L +K+ VFGLGN+ YEHFN + K VD+
Sbjct: 72 FCMATYGEGDPTDNAQDFYDWLQETDVD---LTGVKFAVFGLGNKTYEHFNAMGKYVDQR 128
Query: 225 LANQGAKRLVPVGLGDDDQCIEDDFSAWRELVWPELDNLLRDDDDPTTVSTPYTAAISEY 284
L GA+R+ +GLGDDD +E+DF WRE WP + +T ++I +Y
Sbjct: 129 LEQLGAQRIFELGLGDDDGNLEEDFITWREQFWPAVCEFF------GVEATGEESSIRQY 182
Query: 285 RVVFYDNADAS---VGE----KSWGNANGHAVYDAQHPCRSNVAVRKELHTPSSDRSCTH 337
+V +++ D + GE KS+ N +DA++P + V ++L+ ++R H
Sbjct: 183 ELVVHEDMDVAKVYTGEMGRLKSYENQK--PPFDAKNPFLAAVTANRKLNQ-GTERHLMH 239
Query: 338 LEFDIAGTGLTYETGDHVGVYCENLSETVEEALSLLGLSPDTYFSLHTDKEDGTPLGKST 397
LE DI+ + + YE+GDHV VY N S V + +LG D SL+ E+ S
Sbjct: 240 LELDISDSKIRYESGDHVAVYPANDSALVNQIGEILGADLDVIMSLNNLDEE------SN 293
Query: 398 LPPTFP-PCSLRTALTKYXXXXXXXXXXXXXXXXXXXXXXTEADRLRHLASPAG--KDEY 454
FP P + RTALT Y +E + L +AS +G K+ Y
Sbjct: 294 KKHPFPCPTTYRTALTYYLDITNPPRTNVLYELAQYASEPSEQEHLHKMASSSGEGKELY 353
Query: 455 AQWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCAL 514
W+V ++R +L ++ ++PS +PP+ ++PRLQ RYYSI+SS +V P+ +H+
Sbjct: 354 LSWVVEARRHILAILQDYPSLRPPID-HLCELLPRLQARYYSIASSSKVHPNSVHICAVA 412
Query: 515 VYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQSNFKLPADAKVPIIMIGPGT 574
V + +GRV+KG+ ++W++ P ++ + P+FVR+S F+LP + P+IM+GPGT
Sbjct: 413 VEYEAKSGRVNKGVATSWLRAKEPAGENGGRALVPMFVRKSQFRLPFKSTTPVIMVGPGT 472
Query: 575 GLAPFRGFLQERFALQEAGAELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAF 634
G+APF GF+QER L+E G E+G +LL++GCR DY+Y +EL F + GAL+QL VAF
Sbjct: 473 GIAPFMGFIQERAWLREQGKEVGETLLYYGCRRSDEDYLYREELARFHKDGALTQLNVAF 532
Query: 635 SREGPTKEYVQHKMMEKSSDIWNMLSE-GAYLYVCGDAKSMARDVHRTLHTIVQEQGSLD 693
SRE K YVQH + +W ++ E GA++YVCGDA++MA+DV T + IV E G ++
Sbjct: 533 SREQAHKVYVQHLLKRDREHLWKLIHEGGAHIYVCGDARNMAKDVQNTFYDIVAEFGPME 592
Query: 694 SSKAESMVKNLQMTGRYLRDVW 715
++A VK L GRY DVW
Sbjct: 593 HTQAVDYVKKLMTKGRYSLDVW 614
>pdb|3QFC|A Chain A, Crystal Structure Of Human Nadph-Cytochrome P450 (V492e
Mutant)
pdb|3QFC|B Chain B, Crystal Structure Of Human Nadph-Cytochrome P450 (V492e
Mutant)
Length = 618
Score = 420 bits (1080), Expect = e-117, Method: Compositional matrix adjust.
Identities = 236/621 (38%), Positives = 352/621 (56%), Gaps = 32/621 (5%)
Query: 105 QKVTIFFGTQTGTAEGFAKALADEARARYDKAIFKVVXXXXXXXXXXXXXXKLKKENIVF 164
+ + +F+G+QTGTAE FA L+ +A RY + + +V
Sbjct: 19 RNIIVFYGSQTGTAEEFANRLSKDAH-RY--GMRGMSADPEEYDLADLSSLPEIDNALVV 75
Query: 165 FFLATYGDGEPTDNAARFYKWFTEQKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEI 224
F +ATYG+G+PTDNA FY W E L +K+ VFGLGN+ YEHFN + K VD+
Sbjct: 76 FCMATYGEGDPTDNAQDFYDWLQETDVD---LSGVKFAVFGLGNKTYEHFNAMGKYVDKR 132
Query: 225 LANQGAKRLVPVGLGDDDQCIEDDFSAWRELVWPELDNLLRDDDDPTTVSTPYTAAISEY 284
L GA+R+ +GLGDDD +E+DF WRE W L + +T ++I +Y
Sbjct: 133 LEQLGAQRIFELGLGDDDGNLEEDFITWREQFW------LAVCEHFGVEATGEESSIRQY 186
Query: 285 RVVFYDNADAS---VGE----KSWGNANGHAVYDAQHPCRSNVAVRKELHTPSSDRSCTH 337
+V + + DA+ +GE KS+ N +DA++P + V ++L+ ++R H
Sbjct: 187 ELVVHTDIDAAKVYMGEMGRLKSYENQK--PPFDAKNPFLAAVTTNRKLNQ-GTERHLMH 243
Query: 338 LEFDIAGTGLTYETGDHVGVYCENLSETVEEALSLLGLSPDTYFSLHTDKEDGTPLGKST 397
LE DI+ + + YE+GDHV VY N S V + +LG D SL+ E+ S
Sbjct: 244 LELDISDSKIRYESGDHVAVYPANDSALVNQLGKILGADLDVVMSLNNLDEE------SN 297
Query: 398 LPPTFP-PCSLRTALTKYXXXXXXXXXXXXXXXXXXXXXXTEADRLRHLASPA--GKDEY 454
FP P S RTALT Y +E + LR +AS + GK+ Y
Sbjct: 298 KKHPFPCPTSYRTALTYYLDITNPPRTNVLYELAQYASEPSEQELLRKMASSSGEGKELY 357
Query: 455 AQWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCAL 514
W+V ++R +L ++ + PS +PP+ ++PRLQ RYYSI+SS +V P+ +H+ +
Sbjct: 358 LSWVVEARRHILAILQDCPSLRPPID-HLCELLPRLQARYYSIASSSKVHPNSVHICAVV 416
Query: 515 VYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQSNFKLPADAKVPIIMIGPGT 574
V +T GR++KG + W++ P+ ++ + P+FVR+S F+LP A P+IM+GPGT
Sbjct: 417 VEYETKAGRINKGEATNWLRAKEPVGENGGRALVPMFVRKSQFRLPFKATTPVIMVGPGT 476
Query: 575 GLAPFRGFLQERFALQEAGAELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAF 634
G+APF GF+QER L++ G E+G +LL++GCR DY+Y +EL F + GAL+QL VAF
Sbjct: 477 GVAPFIGFIQERAWLRQQGKEVGETLLYYGCRRSDEDYLYREELAQFHRDGALTQLNVAF 536
Query: 635 SREGPTKEYVQHKMMEKSSDIWNMLSEGAYLYVCGDAKSMARDVHRTLHTIVQEQGSLDS 694
SRE K YVQH + + +W ++ GA++YVCGDA++MARDV T + IV E G+++
Sbjct: 537 SREQSHKVYVQHLLKQDREHLWKLIEGGAHIYVCGDARNMARDVQNTFYDIVAELGAMEH 596
Query: 695 SKAESMVKNLQMTGRYLRDVW 715
++A +K L GRY DVW
Sbjct: 597 AQAVDYIKKLMTKGRYSLDVW 617
>pdb|3ES9|A Chain A, Nadph-Cytochrome P450 Reductase In An Open Conformation
pdb|3ES9|B Chain B, Nadph-Cytochrome P450 Reductase In An Open Conformation
pdb|3ES9|C Chain C, Nadph-Cytochrome P450 Reductase In An Open Conformation
Length = 618
Score = 418 bits (1074), Expect = e-117, Method: Compositional matrix adjust.
Identities = 233/622 (37%), Positives = 351/622 (56%), Gaps = 37/622 (5%)
Query: 105 QKVTIFFGTQTGTAEGFAKALADEARARYDKAIFKVVXXXXXXXXXXXXXXKLKKENIVF 164
+ + +F+G+QTGTAE FA L+ +A RY + + +++V
Sbjct: 22 RNIIVFYGSQTGTAEEFANRLSKDAH-RY--GMRGMSADPEEYDLADLSSLPEIDKSLVV 78
Query: 165 FFLATYGDGEPTDNAARFYKWFTEQKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEI 224
F +ATYG+G+PTDNA FY W E L +K+ VFGLGN+ YEHFN + K VD+
Sbjct: 79 FCMATYGEGDPTDNAQDFYDWLQETDVD---LTGVKFAVFGLGNKTYEHFNAMGKYVDQR 135
Query: 225 LANQGAKRLVPVGLGDDDQCIEDDFSAWRELVWPELDNLLRDDDDPTTVSTPYTAAISEY 284
L GA+R+ +GLGDDD +E+DF WRE WP + + ++I +Y
Sbjct: 136 LEQLGAQRIFELGLGDDDGNLEEDFITWREQFWPAVCEFFGVE----------ASSIRQY 185
Query: 285 RVVFYDNADAS---VGE----KSWGNANGHAVYDAQHPCRSNVAVRKELHTPSSDRSCTH 337
+V +++ D + GE KS+ N +DA++P + V ++L+ ++R H
Sbjct: 186 ELVVHEDMDVAKVYTGEMGRLKSYENQK--PPFDAKNPFLAAVTANRKLNQ-GTERHLMH 242
Query: 338 LEFDIAGTGLTYETGDHVGVYCENLSETVEEALSLLGLSPDTYFSLHTDKEDGTPLGKST 397
LE DI+ + + YE+GDHV VY N S V + +LG D SL+ E+ S
Sbjct: 243 LELDISDSKIRYESGDHVAVYPANDSALVNQIGEILGADLDVIMSLNNLDEE------SN 296
Query: 398 LPPTFP-PCSLRTALTKYXXXXXXXXXXXXXXXXXXXXXXTEADRLRHLASPAG--KDEY 454
FP P + RTALT Y +E + L +AS +G K+ Y
Sbjct: 297 KKHPFPCPTTYRTALTYYLDITNPPRTNVLYELAQYASEPSEQEHLHKMASSSGEGKELY 356
Query: 455 AQWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCAL 514
W+V ++R +L ++ ++PS +PP+ ++PRLQ RYYSI+SS +V P+ +H+
Sbjct: 357 LSWVVEARRHILAILQDYPSLRPPID-HLCELLPRLQARYYSIASSSKVHPNSVHICAVA 415
Query: 515 VYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQSNFKLPADAKVPIIMIGPGT 574
V + +GRV+KG+ ++W++ P ++ + P+FVR+S F+LP + P+IM+GPGT
Sbjct: 416 VEYEAKSGRVNKGVATSWLRAKEPAGENGGRALVPMFVRKSQFRLPFKSTTPVIMVGPGT 475
Query: 575 GLAPFRGFLQERFALQEAGAELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAF 634
G+APF GF+QER L+E G E+G +LL++GCR DY+Y +EL F + GAL+QL VAF
Sbjct: 476 GIAPFMGFIQERAWLREQGKEVGETLLYYGCRRSDEDYLYREELARFHKDGALTQLNVAF 535
Query: 635 SREGPTKEYVQHKMMEKSSDIWNMLSE-GAYLYVCGDAKSMARDVHRTLHTIVQEQGSLD 693
SRE K YVQH + +W ++ E GA++YVCGDA++MA+DV T + IV E G ++
Sbjct: 536 SREQAHKVYVQHLLKRDREHLWKLIHEGGAHIYVCGDARNMAKDVQNTFYDIVAEFGPME 595
Query: 694 SSKAESMVKNLQMTGRYLRDVW 715
++A VK L GRY DVW
Sbjct: 596 HTQAVDYVKKLMTKGRYSLDVW 617
>pdb|1JA0|A Chain A, Cypor-W677x
pdb|1JA0|B Chain B, Cypor-W677x
Length = 620
Score = 416 bits (1070), Expect = e-116, Method: Compositional matrix adjust.
Identities = 233/621 (37%), Positives = 351/621 (56%), Gaps = 33/621 (5%)
Query: 105 QKVTIFFGTQTGTAEGFAKALADEARARYDKAIFKVVXXXXXXXXXXXXXXKLKKENIVF 164
+ + +F+G+QTGTAE FA L+ +A RY + + +++V
Sbjct: 22 RNIIVFYGSQTGTAEEFANRLSKDAH-RY--GMRGMSADPEEYDLADLSSLPEIDKSLVV 78
Query: 165 FFLATYGDGEPTDNAARFYKWFTEQKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEI 224
F +ATYG+G+PTDNA FY W E L +K+ VFGLGN+ YEHFN + K VD+
Sbjct: 79 FCMATYGEGDPTDNAQDFYDWLQETDVD---LTGVKFAVFGLGNKTYEHFNAMGKYVDQR 135
Query: 225 LANQGAKRLVPVGLGDDDQCIEDDFSAWRELVWPELDNLLRDDDDPTTVSTPYTAAISEY 284
L GA+R+ +GLGDDD +E+DF WRE WP + +T ++I +Y
Sbjct: 136 LEQLGAQRIFELGLGDDDGNLEEDFITWREQFWPAVCEFF------GVEATGEESSIRQY 189
Query: 285 RVVFYDNADAS---VGE----KSWGNANGHAVYDAQHPCRSNVAVRKELHTPSSDRSCTH 337
+V +++ D + GE KS+ N +DA++P + V ++L+ ++R H
Sbjct: 190 ELVVHEDMDVAKVYTGEMGRLKSYENQK--PPFDAKNPFLAAVTANRKLNQ-GTERHLMH 246
Query: 338 LEFDIAGTGLTYETGDHVGVYCENLSETVEEALSLLGLSPDTYFSLHTDKEDGTPLGKST 397
LE DI+ + + YE+GDHV VY N S V + +LG D SL+ E+ S
Sbjct: 247 LELDISDSKIRYESGDHVAVYPANDSALVNQIGEILGADLDVIMSLNNLDEE------SN 300
Query: 398 LPPTFP-PCSLRTALTKYXXXXXXXXXXXXXXXXXXXXXXTEADRLRHLASPAG--KDEY 454
FP P + RTALT Y +E + L +AS +G K+ Y
Sbjct: 301 KKHPFPCPTTYRTALTYYLDITNPPRTNVLYELAQYASEPSEQEHLHKMASSSGEGKELY 360
Query: 455 AQWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCAL 514
W+V ++R +L ++ ++PS +PP+ ++PRLQ RYYSI+SS +V P+ +H+
Sbjct: 361 LSWVVEARRHILAILQDYPSLRPPID-HLCELLPRLQARYYSIASSSKVHPNSVHICAVA 419
Query: 515 VYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQSNFKLPADAKVPIIMIGPGT 574
V + +GRV+KG+ ++W++ P ++ + P+FVR+S F+LP + P+IM+GPGT
Sbjct: 420 VEYEAKSGRVNKGVATSWLRAKEPAGENGGRALVPMFVRKSQFRLPFKSTTPVIMVGPGT 479
Query: 575 GLAPFRGFLQERFALQEAGAELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAF 634
G+APF GF+QER L+E G E+G +LL++GCR DY+Y +EL F + GAL+QL VAF
Sbjct: 480 GIAPFMGFIQERAWLREQGKEVGETLLYYGCRRSDEDYLYREELARFHKDGALTQLNVAF 539
Query: 635 SREGPTKEYVQHKMMEKSSDIWNMLSE-GAYLYVCGDAKSMARDVHRTLHTIVQEQGSLD 693
SRE K YVQH + +W ++ E GA++YVCGDA++MA+DV T + IV E G ++
Sbjct: 540 SREQAHKVYVQHLLKRDREHLWKLIHEGGAHIYVCGDARNMAKDVQNTFYDIVAEFGPME 599
Query: 694 SSKAESMVKNLQMTGRYLRDV 714
++A VK L GRY DV
Sbjct: 600 HTQAVDYVKKLMTKGRYSLDV 620
>pdb|1J9Z|A Chain A, Cypor-W677g
pdb|1J9Z|B Chain B, Cypor-W677g
Length = 622
Score = 416 bits (1069), Expect = e-116, Method: Compositional matrix adjust.
Identities = 233/621 (37%), Positives = 351/621 (56%), Gaps = 33/621 (5%)
Query: 105 QKVTIFFGTQTGTAEGFAKALADEARARYDKAIFKVVXXXXXXXXXXXXXXKLKKENIVF 164
+ + +F+G+QTGTAE FA L+ +A RY + + +++V
Sbjct: 22 RNIIVFYGSQTGTAEEFANRLSKDAH-RY--GMRGMSADPEEYDLADLSSLPEIDKSLVV 78
Query: 165 FFLATYGDGEPTDNAARFYKWFTEQKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEI 224
F +ATYG+G+PTDNA FY W E L +K+ VFGLGN+ YEHFN + K VD+
Sbjct: 79 FCMATYGEGDPTDNAQDFYDWLQETDVD---LTGVKFAVFGLGNKTYEHFNAMGKYVDQR 135
Query: 225 LANQGAKRLVPVGLGDDDQCIEDDFSAWRELVWPELDNLLRDDDDPTTVSTPYTAAISEY 284
L GA+R+ +GLGDDD +E+DF WRE WP + +T ++I +Y
Sbjct: 136 LEQLGAQRIFELGLGDDDGNLEEDFITWREQFWPAVCEFF------GVEATGEESSIRQY 189
Query: 285 RVVFYDNADAS---VGE----KSWGNANGHAVYDAQHPCRSNVAVRKELHTPSSDRSCTH 337
+V +++ D + GE KS+ N +DA++P + V ++L+ ++R H
Sbjct: 190 ELVVHEDMDVAKVYTGEMGRLKSYENQK--PPFDAKNPFLAAVTANRKLNQ-GTERHLMH 246
Query: 338 LEFDIAGTGLTYETGDHVGVYCENLSETVEEALSLLGLSPDTYFSLHTDKEDGTPLGKST 397
LE DI+ + + YE+GDHV VY N S V + +LG D SL+ E+ S
Sbjct: 247 LELDISDSKIRYESGDHVAVYPANDSALVNQIGEILGADLDVIMSLNNLDEE------SN 300
Query: 398 LPPTFP-PCSLRTALTKYXXXXXXXXXXXXXXXXXXXXXXTEADRLRHLASPAG--KDEY 454
FP P + RTALT Y +E + L +AS +G K+ Y
Sbjct: 301 KKHPFPCPTTYRTALTYYLDITNPPRTNVLYELAQYASEPSEQEHLHKMASSSGEGKELY 360
Query: 455 AQWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCAL 514
W+V ++R +L ++ ++PS +PP+ ++PRLQ RYYSI+SS +V P+ +H+
Sbjct: 361 LSWVVEARRHILAILQDYPSLRPPID-HLCELLPRLQARYYSIASSSKVHPNSVHICAVA 419
Query: 515 VYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQSNFKLPADAKVPIIMIGPGT 574
V + +GRV+KG+ ++W++ P ++ + P+FVR+S F+LP + P+IM+GPGT
Sbjct: 420 VEYEAKSGRVNKGVATSWLRAKEPAGENGGRALVPMFVRKSQFRLPFKSTTPVIMVGPGT 479
Query: 575 GLAPFRGFLQERFALQEAGAELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAF 634
G+APF GF+QER L+E G E+G +LL++GCR DY+Y +EL F + GAL+QL VAF
Sbjct: 480 GIAPFMGFIQERAWLREQGKEVGETLLYYGCRRSDEDYLYREELARFHKDGALTQLNVAF 539
Query: 635 SREGPTKEYVQHKMMEKSSDIWNMLSE-GAYLYVCGDAKSMARDVHRTLHTIVQEQGSLD 693
SRE K YVQH + +W ++ E GA++YVCGDA++MA+DV T + IV E G ++
Sbjct: 540 SREQAHKVYVQHLLKRDREHLWKLIHEGGAHIYVCGDARNMAKDVQNTFYDIVAEFGPME 599
Query: 694 SSKAESMVKNLQMTGRYLRDV 714
++A VK L GRY DV
Sbjct: 600 HTQAVDYVKKLMTKGRYSLDV 620
>pdb|1JA1|A Chain A, Cypor-Triple Mutant
pdb|1JA1|B Chain B, Cypor-Triple Mutant
Length = 622
Score = 414 bits (1064), Expect = e-115, Method: Compositional matrix adjust.
Identities = 231/622 (37%), Positives = 351/622 (56%), Gaps = 33/622 (5%)
Query: 105 QKVTIFFGTQTGTAEGFAKALADEARARYDKAIFKVVXXXXXXXXXXXXXXKLKKENIVF 164
+ + +F+G+QTGTAE FA L+ +A RY + + +++V
Sbjct: 22 RNIIVFYGSQTGTAEEFANRLSKDAH-RY--GMRGMSADPEEYDLADLSSLPEIDKSLVV 78
Query: 165 FFLATYGDGEPTDNAARFYKWFTEQKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEI 224
F +ATYG+G+PTDNA FY W E L +K+ VFGLGN+ YEHFN + K VD+
Sbjct: 79 FCMATYGEGDPTDNAQDFYDWLQETDVD---LTGVKFAVFGLGNKTYEHFNAMGKYVDQR 135
Query: 225 LANQGAKRLVPVGLGDDDQCIEDDFSAWRELVWPELDNLLRDDDDPTTVSTPYTAAISEY 284
L GA+R+ +GLGDDD +E+DF WRE WP + +T ++I +Y
Sbjct: 136 LEQLGAQRIFELGLGDDDGNLEEDFITWREQFWPAVCEFF------GVEATGEESSIRQY 189
Query: 285 RVVFYDNADAS---VGE----KSWGNANGHAVYDAQHPCRSNVAVRKELHTPSSDRSCTH 337
+V +++ D + GE KS+ N +DA++P + V ++L+ ++R H
Sbjct: 190 ELVVHEDMDVAKVYTGEMGRLKSYENQK--PPFDAKNPFLAAVTANRKLNQ-GTERHLMH 246
Query: 338 LEFDIAGTGLTYETGDHVGVYCENLSETVEEALSLLGLSPDTYFSLHTDKEDGTPLGKST 397
LE DI+ + + YE+GDHV VY N S V + +LG D SL+ E+ S
Sbjct: 247 LELDISDSKIRYESGDHVAVYPANDSALVNQIGEILGADLDVIMSLNNLDEE------SN 300
Query: 398 LPPTFP-PCSLRTALTKYXXXXXXXXXXXXXXXXXXXXXXTEADRLRHLASPAG--KDEY 454
FP P + RTALT Y +E + L +AS +G K+ Y
Sbjct: 301 KKHPFPCPTTYRTALTYYLDITNPPRTNVLYELAQYASEPSEQEHLHKMASSSGEGKELY 360
Query: 455 AQWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCAL 514
W+V ++R +L ++ ++PS +PP+ ++PRLQ RYY+I+SS +V P+ +H+
Sbjct: 361 LSWVVEARRHILAILQDYPSLRPPID-HLCELLPRLQARYYAIASSSKVHPNSVHICAVA 419
Query: 515 VYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQSNFKLPADAKVPIIMIGPGT 574
V + +GRV+KG+ ++W++ P ++ + P+FVR+S F+LP + P+IM+GPGT
Sbjct: 420 VEYEAKSGRVNKGVATSWLRAKEPAGENGGRALVPMFVRKSQFRLPFKSTTPVIMVGPGT 479
Query: 575 GLAPFRGFLQERFALQEAGAELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAF 634
G+APF GF+QER L+E G E+G +LL++GCR DY+Y +EL F + GAL+QL VAF
Sbjct: 480 GIAPFMGFIQERAWLREQGKEVGETLLYYGCRRSDEDYLYREELARFHKDGALTQLNVAF 539
Query: 635 SREGPTKEYVQHKMMEKSSDIWNMLSE-GAYLYVCGDAKSMARDVHRTLHTIVQEQGSLD 693
SRE K YVQH + +W ++ E GA++YV GDA++MA+DV T + IV E G ++
Sbjct: 540 SREQAHKVYVQHLLKRDREHLWKLIHEGGAHIYVAGDARNMAKDVQNTFYDIVAEFGPME 599
Query: 694 SSKAESMVKNLQMTGRYLRDVW 715
++A VK L GRY +VW
Sbjct: 600 HTQAVDYVKKLMTKGRYSLNVW 621
>pdb|3OJW|A Chain A, Disulfide Crosslinked Cytochrome P450 Reductase Inactive
pdb|3OJX|A Chain A, Disulfide Crosslinked Cytochrome P450 Reductase Inactive
Length = 622
Score = 413 bits (1061), Expect = e-115, Method: Compositional matrix adjust.
Identities = 232/622 (37%), Positives = 350/622 (56%), Gaps = 33/622 (5%)
Query: 105 QKVTIFFGTQTGTAEGFAKALADEARARYDKAIFKVVXXXXXXXXXXXXXXKLKKENIVF 164
+ + +F+G+QTGTAE FA L+ +A RY + + +++V
Sbjct: 22 RNIIVFYGSQTGTAEEFANRLSKDAH-RY--GMRGMSADPEEYDLADLSSLPEIDKSLVV 78
Query: 165 FFLATYGDGEPTDNAARFYKWFTEQKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEI 224
F +ATYG+G+PT NA FY W E L +K+ VFGLGN+ YEHFN + K VD+
Sbjct: 79 FAMATYGEGDPTCNAQDFYDWLQETDVD---LTGVKFAVFGLGNKTYEHFNAMGKYVDQR 135
Query: 225 LANQGAKRLVPVGLGDDDQCIEDDFSAWRELVWPELDNLLRDDDDPTTVSTPYTAAISEY 284
L GA+R+ +GLGDDD +E+DF WRE WP + +T ++I +Y
Sbjct: 136 LEQLGAQRIFELGLGDDDGNLEEDFITWREQFWPAVAEFF------GVEATGEESSIRQY 189
Query: 285 RVVFYDNADAS---VGE----KSWGNANGHAVYDAQHPCRSNVAVRKELHTPSSDRSCTH 337
+V +++ D + GE KS+ N +DA++P + V ++L+ ++R H
Sbjct: 190 ELVVHEDMDVAKVYTGEMGRLKSYENQK--PPFDAKNPFLAAVTANRKLNQ-GTERHLMH 246
Query: 338 LEFDIAGTGLTYETGDHVGVYCENLSETVEEALSLLGLSPDTYFSLHTDKEDGTPLGKST 397
LE DI+ + + YE+GDHV VY N S V + +LG D SL+ E+ S
Sbjct: 247 LELDISDSKIRYESGDHVAVYPANDSALVNQIGEILGADLDVIMSLNNLDEE------SN 300
Query: 398 LPPTFP-PCSLRTALTKYXXXXXXXXXXXXXXXXXXXXXXTEADRLRHLASPAG--KDEY 454
FP P + RTALT Y +E + L +AS +G K+ Y
Sbjct: 301 KKHPFPTPTTYRTALTYYLDITNPPRTNVLYELAQYASEPSEQEHLHKMASSSGEGKELY 360
Query: 455 AQWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCAL 514
W+V ++R +L ++ ++PS +PP+ ++PRLQ RYYSI+SS +V P+ +H+T
Sbjct: 361 LSWVVEARRHILAILQDYPSLRPPIDHLLE-LLPRLQARYYSIASSSKVHPNSVHITAVA 419
Query: 515 VYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQSNFKLPADAKVPIIMIGPGT 574
V + +GRV+KG+ ++W++ P ++ + P+FV +S F+LP + P+IM+GPGT
Sbjct: 420 VEYEAKSGRVNKGVATSWLRAKEPAGENGGRALVPMFVCKSQFRLPFKSTTPVIMVGPGT 479
Query: 575 GLAPFRGFLQERFALQEAGAELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAF 634
G+APF GF+QER L+E G E+G +LL++G R DY+Y +EL F + GAL+QL VAF
Sbjct: 480 GIAPFMGFIQERAWLREQGKEVGETLLYYGARRSDEDYLYREELARFHKDGALTQLNVAF 539
Query: 635 SREGPTKEYVQHKMMEKSSDIWNMLSE-GAYLYVCGDAKSMARDVHRTLHTIVQEQGSLD 693
SRE K YVQH + +W ++ E GA++YVCGDA++MA+DV T + IV E G ++
Sbjct: 540 SREQAHKVYVQHLLKRDREHLWKLIHEGGAHIYVCGDARNMAKDVQNTFYDIVAEFGPME 599
Query: 694 SSKAESMVKNLQMTGRYLRDVW 715
++A VK L GRY DVW
Sbjct: 600 HTQAVDYVKKLMTKGRYSLDVW 621
>pdb|3FJO|A Chain A, Structure Of Chimeric Yh Cpr
Length = 637
Score = 382 bits (980), Expect = e-106, Method: Compositional matrix adjust.
Identities = 221/625 (35%), Positives = 341/625 (54%), Gaps = 35/625 (5%)
Query: 102 DGKQKVTIFFGTQTGTAEGFAKALADEARARYDKAIFKVVXXXXXXXXXXXXXXKLKKEN 161
+ + + + +QTGTAE +AK + E A+++ +
Sbjct: 36 ENNKNYLVLYASQTGTAEDYAKKFSKELVAKFNLNVMCADVENYDFESLNDVPV------ 89
Query: 162 IVFFFLATYGDGEPTDNAARFYKWFTEQKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVV 221
IV F++TYG+G+ D A F + + G L L+Y +FGLGN YE FN AK
Sbjct: 90 IVSIFISTYGEGDFPDGAVNFEDFICNAEAGA--LSNLRYNMFGLGNSTYEFFNGAAKKA 147
Query: 222 DEILANQGAKRLVPVGLGDDDQCIED-DFSAWRELVWPELDNLLRDDDDPTTVSTPYTAA 280
++ L+ GA RL +G DD D D+ AW++ + L D+ +T ++
Sbjct: 148 EKHLSAAGAIRLGKLGEADDGAGTTDEDYMAWKDSILEVLK------DELGVEATGEESS 201
Query: 281 ISEYRVVFYDNADAS---VGE----KSWGNANGHAVYDAQHPCRSNVAVRKELHTPSSDR 333
I +Y +V + + DA+ +GE KS+ N +DA++P + V ++L+ ++R
Sbjct: 202 IRQYELVVHTDIDAAKVYMGEMGRLKSYENQK--PPFDAKNPFLAAVTTNRKLNQ-GTER 258
Query: 334 SCTHLEFDIAGTGLTYETGDHVGVYCENLSETVEEALSLLGLSPDTYFSLHTDKEDGTPL 393
HLE DI+ + + YE+GDHV VY N S V + +LG D SL+ E+
Sbjct: 259 HLMHLELDISDSKIRYESGDHVAVYPANDSALVNQLGKILGADLDVVMSLNNLDEE---- 314
Query: 394 GKSTLPPTFP-PCSLRTALTKYXXXXXXXXXXXXXXXXXXXXXXTEADRLRHLASPAG-- 450
S FP P S RTALT Y +E + LR +AS +G
Sbjct: 315 --SNKKHPFPCPTSYRTALTYYLDITNPPRTNVLYELAQYASEPSEQELLRKMASSSGEG 372
Query: 451 KDEYAQWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHV 510
K+ Y W+V ++R +L ++ + PS +PP+ ++PRLQ RYYSI+SS +V P+ +H+
Sbjct: 373 KELYLSWVVEARRHILAILQDCPSLRPPID-HLCELLPRLQARYYSIASSSKVHPNSVHI 431
Query: 511 TCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQSNFKLPADAKVPIIMI 570
+V +T GR++KG+ + W++ P ++ + P+FVR+S F+LP A P+IM+
Sbjct: 432 CAVVVEYETKAGRINKGVATNWLRAKEPAGENGGRALVPMFVRKSQFRLPFKATTPVIMV 491
Query: 571 GPGTGLAPFRGFLQERFALQEAGAELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQL 630
GPGTG+APF GF+QER L++ G E+G +LL++GCR DY+Y +EL F + GAL+QL
Sbjct: 492 GPGTGVAPFIGFIQERAWLRQQGKEVGETLLYYGCRRSDEDYLYREELAQFHRDGALTQL 551
Query: 631 IVAFSREGPTKEYVQHKMMEKSSDIWNMLSEGAYLYVCGDAKSMARDVHRTLHTIVQEQG 690
VAFSRE K YVQH + + +W ++ GA++YVCGDA++MARDV T + IV E G
Sbjct: 552 NVAFSREQSHKVYVQHLLKQDREHLWKLIEGGAHIYVCGDARNMARDVQNTFYDIVAELG 611
Query: 691 SLDSSKAESMVKNLQMTGRYLRDVW 715
+++ ++A +K L GRY DVW
Sbjct: 612 AMEHAQAVDYIKKLMTKGRYSLDVW 636
>pdb|3QFS|A Chain A, Crystal Structure Of Nadph-Cytochrome P450 Reductase
(FadNADPH Domain)
Length = 458
Score = 318 bits (814), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 171/446 (38%), Positives = 262/446 (58%), Gaps = 20/446 (4%)
Query: 280 AISEYRVVFYDNADAS---VGE----KSWGNANGHAVYDAQHPCRSNVAVRKELHTPSSD 332
+I +Y +V + + DA+ +GE KS+ N +DA++P + V ++L+ ++
Sbjct: 22 SIRQYELVVHTDIDAAKVYMGEMGRLKSYENQK--PPFDAKNPFLAAVTTNRKLNQ-GTE 78
Query: 333 RSCTHLEFDIAGTGLTYETGDHVGVYCENLSETVEEALSLLGLSPDTYFSLHTDKEDGTP 392
R HLE DI+ + + YE+GDHV VY N S V + +LG D SL+ E+
Sbjct: 79 RHLMHLELDISDSKIRYESGDHVAVYPANDSALVNQLGKILGADLDVVMSLNNLDEE--- 135
Query: 393 LGKSTLPPTFP-PCSLRTALTKYXXXXXXXXXXXXXXXXXXXXXXTEADRLRHLASPAG- 450
S FP P S RTALT Y +E + LR +AS +G
Sbjct: 136 ---SNKKHPFPCPTSYRTALTYYLDITNPPRTNVLYELAQYASEPSEQELLRKMASSSGE 192
Query: 451 -KDEYAQWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIH 509
K+ Y W+V ++R +L ++ + PS +PP+ ++PRLQ RYYSI+SS +V P+ +H
Sbjct: 193 GKELYLSWVVEARRHILAILQDCPSLRPPID-HLCELLPRLQARYYSIASSSKVHPNSVH 251
Query: 510 VTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQSNFKLPADAKVPIIM 569
+ +V +T GR++KG+ + W++ P+ ++ + P+FVR+S F+LP A P+IM
Sbjct: 252 ICAVVVEYETKAGRINKGVATNWLRAKEPVGENGGRALVPMFVRKSQFRLPFKATTPVIM 311
Query: 570 IGPGTGLAPFRGFLQERFALQEAGAELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQ 629
+GPGTG+APF GF+QER L++ G E+G +LL++GCR DY+Y +EL F + GAL+Q
Sbjct: 312 VGPGTGVAPFIGFIQERAWLRQQGKEVGETLLYYGCRRSDEDYLYREELAQFHRDGALTQ 371
Query: 630 LIVAFSREGPTKEYVQHKMMEKSSDIWNMLSEGAYLYVCGDAKSMARDVHRTLHTIVQEQ 689
L VAFSRE K YVQH + + +W ++ GA++YVCGDA++MARDV T + IV E
Sbjct: 372 LNVAFSREQSHKVYVQHLLKQDREHLWKLIEGGAHIYVCGDARNMARDVQNTFYDIVAEL 431
Query: 690 GSLDSSKAESMVKNLQMTGRYLRDVW 715
G+++ ++A +K L GRY DVW
Sbjct: 432 GAMEHAQAVDYIKKLMTKGRYSLDVW 457
>pdb|3QFT|A Chain A, Crystal Structure Of Nadph-Cytochrome P450 Reductase
(FadNADPH DOMAIN And R457h Mutant)
Length = 458
Score = 315 bits (808), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 170/446 (38%), Positives = 261/446 (58%), Gaps = 20/446 (4%)
Query: 280 AISEYRVVFYDNADAS---VGE----KSWGNANGHAVYDAQHPCRSNVAVRKELHTPSSD 332
+I +Y +V + + DA+ +GE KS+ N +DA++P + V ++L+ ++
Sbjct: 22 SIRQYELVVHTDIDAAKVYMGEMGRLKSYENQK--PPFDAKNPFLAAVTTNRKLNQ-GTE 78
Query: 333 RSCTHLEFDIAGTGLTYETGDHVGVYCENLSETVEEALSLLGLSPDTYFSLHTDKEDGTP 392
R HLE DI+ + + YE+GDHV VY N S V + +LG D SL+ E+
Sbjct: 79 RHLMHLELDISDSKIRYESGDHVAVYPANDSALVNQLGKILGADLDVVMSLNNLDEE--- 135
Query: 393 LGKSTLPPTFP-PCSLRTALTKYXXXXXXXXXXXXXXXXXXXXXXTEADRLRHLASPAG- 450
S FP P S RTALT Y +E + LR +AS +G
Sbjct: 136 ---SNKKHPFPCPTSYRTALTYYLDITNPPRTNVLYELAQYASEPSEQELLRKMASSSGE 192
Query: 451 -KDEYAQWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIH 509
K+ Y W+V ++R +L ++ + PS +PP+ ++PRLQ YYSI+SS +V P+ +H
Sbjct: 193 GKELYLSWVVEARRHILAILQDCPSLRPPID-HLCELLPRLQAHYYSIASSSKVHPNSVH 251
Query: 510 VTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQSNFKLPADAKVPIIM 569
+ +V +T GR++KG+ + W++ P+ ++ + P+FVR+S F+LP A P+IM
Sbjct: 252 ICAVVVEYETKAGRINKGVATNWLRAKEPVGENGGRALVPMFVRKSQFRLPFKATTPVIM 311
Query: 570 IGPGTGLAPFRGFLQERFALQEAGAELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQ 629
+GPGTG+APF GF+QER L++ G E+G +LL++GCR DY+Y +EL F + GAL+Q
Sbjct: 312 VGPGTGVAPFIGFIQERAWLRQQGKEVGETLLYYGCRRSDEDYLYREELAQFHRDGALTQ 371
Query: 630 LIVAFSREGPTKEYVQHKMMEKSSDIWNMLSEGAYLYVCGDAKSMARDVHRTLHTIVQEQ 689
L VAFSRE K YVQH + + +W ++ GA++YVCGDA++MARDV T + IV E
Sbjct: 372 LNVAFSREQSHKVYVQHLLKQDREHLWKLIEGGAHIYVCGDARNMARDVQNTFYDIVAEL 431
Query: 690 GSLDSSKAESMVKNLQMTGRYLRDVW 715
G+++ ++A +K L GRY DVW
Sbjct: 432 GAMEHAQAVDYIKKLMTKGRYSLDVW 457
>pdb|2BPO|A Chain A, Crystal Structure Of The Yeast Cpr Triple Mutant: D74g,
Y75f, K78a.
pdb|2BPO|B Chain B, Crystal Structure Of The Yeast Cpr Triple Mutant: D74g,
Y75f, K78a
Length = 682
Score = 270 bits (690), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 200/664 (30%), Positives = 318/664 (47%), Gaps = 78/664 (11%)
Query: 102 DGKQKVTIFFGTQTGTAEGFAKALADEARARYDKAIFKVVXXXXXXXXXXXXXXKLKKEN 161
+ + + + +QTGTAEGFAKA + E A+++ +
Sbjct: 47 ENNKNYLVLYASQTGTAEGFAKAFSKELVAKFNLNVMCADVENYDFESLNDVPV------ 100
Query: 162 IVFFFLATYGDGEPTDNAARFYKWFTEQKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVV 221
IV F++TYG+G+ D A F + + G L L+Y +FGLGN YE FN AK
Sbjct: 101 IVSIFISTYGEGDFPDGAVNFEDFICNAEAGA--LSNLRYNMFGLGNSTYEFFNGAAKKA 158
Query: 222 DEILANQGAKRLVPVGLGDDDQCIED-DFSAWRELVWPELDNLLRDDDDPTTVSTPYTAA 280
++ L+ GA RL +G DD D D+ AW++ + L + L D+ ++ +
Sbjct: 159 EKHLSAAGAIRLGKLGEADDGAGTTDEDYMAWKDSILEVLKDELHLDEQEAKFTSQF--- 215
Query: 281 ISEYRVVFYDNADASVGEKSWG---------NANGHAV--YDAQHPCRSNVAVRKELHTP 329
+Y V+ S+GE S NA+G + +D P + + +EL +
Sbjct: 216 --QYTVLNEITDSMSLGEPSAHYLPSHQLNRNADGIQLGPFDLSQPYIAPIVKSRELFS- 272
Query: 330 SSDRSCTHLEFDIAGTGLTYETGDHVGVYCENLSETVEEALSLLGLSPDTYFSLHTDKED 389
S+DR+C H EFD++G+ + Y TGDH+ V+ N E VE+ LS+ L P+T F L
Sbjct: 273 SNDRNCIHSEFDLSGSNIKYSTGDHLAVWPSNPLEKVEQFLSIFNLDPETIFDLK----- 327
Query: 390 GTPLGKSTLPPTFPPCSLRTALTKYXXXXXXXXXXXXXXXXXXXXXXTEADRLRHLASPA 449
PL + P P ++ A+ Y ++L L+
Sbjct: 328 --PLDPTVKVPFPTPTTIGAAIKHYLEITGPVSRQLFSSLIQFAPNADVKEKLTLLSK-- 383
Query: 450 GKDEYAQWIVASQRSLLEVMSEFPSAKP----PLGVFFAAIVPRLQPRYYSISSSPRVAP 505
KD++A I + ++ + + P+ F VP++ PRYYSISSS
Sbjct: 384 DKDQFAVEITSKYFNIADALKYLSDGAKWDTVPMQ-FLVESVPQMTPRYYSISSSSLSEK 442
Query: 506 SRIHVTCALVYEKTPTGRVHK-----GLCSTWMKN-------------SLPMEKSNDCSW 547
+HVT + E P + G+ + ++N +LP+ +
Sbjct: 443 QTVHVTS--IVENFPNPELPDAPPVVGVTTNLLRNIQLAQNNVNIAETNLPVHYDLNGPR 500
Query: 548 A-------PIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEA------GA 594
P+ VR+SNF+LP++ P+IMIGPGTG+APFRGF++ER A E+
Sbjct: 501 KLFANYKLPVHVRRSNFRLPSNPSTPVIMIGPGTGVAPFRGFIRERVAFLESQKKGGNNV 560
Query: 595 ELGPSLLFFGCRNRKMDYIYEDELNNFVQ--SGALSQLIVAFSREGPTKE-YVQHKMMEK 651
LG +LF+G RN D++Y+DE + + G+ +++VA SR TK+ YVQ K+ +
Sbjct: 561 SLGKHILFYGSRNTD-DFLYQDEWPEYAKKLDGSF-EMVVAHSRLPNTKKVYVQDKLKDY 618
Query: 652 SSDIWNMLSEGAYLYVCGDAKSMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYL 711
++ M++ GA++YVCGDAK MA+ V L I+ S+ + +A ++K L+ +GRY
Sbjct: 619 EDQVFEMINNGAFIYVCGDAKGMAKGVSTALVGILSRGKSITTDEATELIKMLKTSGRYQ 678
Query: 712 RDVW 715
DVW
Sbjct: 679 EDVW 682
>pdb|2BF4|A Chain A, A Second Fmn-Binding Site In Yeast Nadph-Cytochrome P450
Reductase Suggests A Novel Mechanism Of Electron
Transfer By Diflavin Reductases.
pdb|2BF4|B Chain B, A Second Fmn-Binding Site In Yeast Nadph-Cytochrome P450
Reductase Suggests A Novel Mechanism Of Electron
Transfer By Diflavin Reductases.
pdb|2BN4|A Chain A, A Second Fmn-Binding Site In Yeast Nadph-Cytochrome P450
Reductase Suggests A Novel Mechanism Of Electron
Transfer By Diflavin Reductase
pdb|2BN4|B Chain B, A Second Fmn-Binding Site In Yeast Nadph-Cytochrome P450
Reductase Suggests A Novel Mechanism Of Electron
Transfer By Diflavin Reductase
Length = 682
Score = 263 bits (672), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 197/664 (29%), Positives = 316/664 (47%), Gaps = 78/664 (11%)
Query: 102 DGKQKVTIFFGTQTGTAEGFAKALADEARARYDKAIFKVVXXXXXXXXXXXXXXKLKKEN 161
+ + + + +QTGTAE +AK + E A+++ +
Sbjct: 47 ENNKNYLVLYASQTGTAEDYAKKFSKELVAKFNLNVMCADVENYDFESLNDVPV------ 100
Query: 162 IVFFFLATYGDGEPTDNAARFYKWFTEQKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVV 221
IV F++TYG+G+ D A F + + G L L+Y +FGLGN YE FN AK
Sbjct: 101 IVSIFISTYGEGDFPDGAVNFEDFICNAEAGA--LSNLRYNMFGLGNSTYEFFNGAAKKA 158
Query: 222 DEILANQGAKRLVPVGLGDDDQCIED-DFSAWRELVWPELDNLLRDDDDPTTVSTPYTAA 280
++ L+ GA RL +G DD D D+ AW++ + L + L D+ ++ +
Sbjct: 159 EKHLSAAGAIRLGKLGEADDGAGTTDEDYMAWKDSILEVLKDELHLDEQEAKFTSQF--- 215
Query: 281 ISEYRVVFYDNADASVGEKSWG---------NANGHAV--YDAQHPCRSNVAVRKELHTP 329
+Y V+ S+GE S NA+G + +D P + + +EL +
Sbjct: 216 --QYTVLNEITDSMSLGEPSAHYLPSHQLNRNADGIQLGPFDLSQPYIAPIVKSRELFS- 272
Query: 330 SSDRSCTHLEFDIAGTGLTYETGDHVGVYCENLSETVEEALSLLGLSPDTYFSLHTDKED 389
S+DR+C H EFD++G+ + Y TGDH+ V+ N E VE+ LS+ L P+T F L
Sbjct: 273 SNDRNCIHSEFDLSGSNIKYSTGDHLAVWPSNPLEKVEQFLSIFNLDPETIFDLK----- 327
Query: 390 GTPLGKSTLPPTFPPCSLRTALTKYXXXXXXXXXXXXXXXXXXXXXXTEADRLRHLASPA 449
PL + P P ++ A+ Y ++L L+
Sbjct: 328 --PLDPTVKVPFPTPTTIGAAIKHYLEITGPVSRQLFSSLIQFAPNADVKEKLTLLSK-- 383
Query: 450 GKDEYAQWIVASQRSLLEVMSEFPSAKP----PLGVFFAAIVPRLQPRYYSISSSPRVAP 505
KD++A I + ++ + + P+ F VP++ PRYYSISSS
Sbjct: 384 DKDQFAVEITSKYFNIADALKYLSDGAKWDTVPMQ-FLVESVPQMTPRYYSISSSSLSEK 442
Query: 506 SRIHVTCALVYEKTPTGRVHK-----GLCSTWMKN-------------SLPMEKSNDCSW 547
+HVT + E P + G+ + ++N +LP+ +
Sbjct: 443 QTVHVTS--IVENFPNPELPDAPPVVGVTTNLLRNIQLAQNNVNIAETNLPVHYDLNGPR 500
Query: 548 A-------PIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEA------GA 594
P+ VR+SNF+LP++ P+IMIGPGTG+APFRGF++ER A E+
Sbjct: 501 KLFANYKLPVHVRRSNFRLPSNPSTPVIMIGPGTGVAPFRGFIRERVAFLESQKKGGNNV 560
Query: 595 ELGPSLLFFGCRNRKMDYIYEDELNNFVQ--SGALSQLIVAFSREGPTKE-YVQHKMMEK 651
LG +LF+G RN D++Y+DE + + G+ +++VA SR TK+ YVQ K+ +
Sbjct: 561 SLGKHILFYGSRNTD-DFLYQDEWPEYAKKLDGSF-EMVVAHSRLPNTKKVYVQDKLKDY 618
Query: 652 SSDIWNMLSEGAYLYVCGDAKSMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYL 711
++ M++ GA++YVCGDAK MA+ V L I+ S+ + +A ++K L+ +GRY
Sbjct: 619 EDQVFEMINNGAFIYVCGDAKGMAKGVSTALVGILSRGKSITTDEATELIKMLKTSGRYQ 678
Query: 712 RDVW 715
DVW
Sbjct: 679 EDVW 682
>pdb|1TLL|A Chain A, Crystal Structure Of Rat Neuronal Nitric-Oxide Synthase
Reductase Module At 2.3 A Resolution.
pdb|1TLL|B Chain B, Crystal Structure Of Rat Neuronal Nitric-Oxide Synthase
Reductase Module At 2.3 A Resolution
Length = 688
Score = 245 bits (626), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 191/666 (28%), Positives = 293/666 (43%), Gaps = 80/666 (12%)
Query: 106 KVTIFFGTQTGTAEGFAKALADEARARYDKAIFKVVXXXXXXXXXXXXXXKLKKENIVFF 165
K TI + T+TG ++ +AK L + IFK L+ E +V
Sbjct: 13 KATILYATETGKSQAYAKTLCE---------IFKHAFDAKAMSMEEYDIVHLEHEALVLV 63
Query: 166 FLATYGDGEPTDNAARFYKWFTEQK----------------------------------- 190
+T+G+G+P +N +F E +
Sbjct: 64 VTSTFGNGDPPENGEKFGCALMEMRHPNSVQEERKSYKVRFNSVSSYSDSRKSSGDGPDL 123
Query: 191 ----EGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILANQGAKRLVPVGLGDDDQCIE 246
E L +++ VFGLG+R Y HF VD +L G +R++ + GD+ E
Sbjct: 124 RDNFESTGPLANVRFSVFGLGSRAYPHFCAFGHAVDTLLEELGGERILKMREGDELCGQE 183
Query: 247 DDFSAWRELVWPELDNLLRDDDDPTTVSTPYTAAISE----YRVVFYDNADASVGEKSWG 302
+ F W + V+ ++ DD + P + IS R F A + + G
Sbjct: 184 EAFRTWAKKVFKAACDVFCVGDD-VNIEKPNNSLISNDRSWKRNKFRLTYVAEAPDLTQG 242
Query: 303 NANGHAVYDAQHPCRSNVAVRKELHTPSSDRSCTHLEFDIAGTG-LTYETGDHVGVYCEN 361
+N H + + + R+ L +P S RS + G L Y+ GDH+GV+ N
Sbjct: 243 LSNVHK----KRVSAARLLSRQNLQSPKSSRSTIFVRLHTNGNQELQYQPGDHLGVFPGN 298
Query: 362 LSETVEEALSLLGLSPDTYFSLHTD--KEDGTPLGKSTL---PPTFPPCSLRTALTKYXX 416
+ V + L +P + + +E T LG + PPC++ A Y
Sbjct: 299 HEDLVNALIERLEDAPPANHVVKVEMLEERNTALGVISNWKDESRLPPCTIFQAFKYYLD 358
Query: 417 XXXXXXXXXXXXXXXXXXXXTEADRLRHLASPAGKDEYAQWIVASQRSLLEVMSEFPSAK 476
E RL L G EY +W +++EV+ EFPS +
Sbjct: 359 ITTPPTPLQLQQFASLATNEKEKQRL--LVLSKGLQEYEEWKWGKNPTMVEVLEEFPSIQ 416
Query: 477 PPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGR--VHKGLCSTWMK 534
P + LQPRYYSISSSP + P +H+T A+V T G VH G+CS+W+
Sbjct: 417 MP-ATLLLTQLSLLQPRYYSISSSPDMYPDEVHLTVAIVSYHTRDGEGPVHHGVCSSWLN 475
Query: 535 NSLPMEKSNDCSWAPIFVRQS-NFKLPADAKVPIIMIGPGTGLAPFRGFLQER-FALQEA 592
+++D P FVR + +F LP + +VP I++GPGTG+APFR F Q+R F +Q
Sbjct: 476 RI----QADDV--VPCFVRGAPSFHLPRNPQVPCILVGPGTGIAPFRSFWQQRQFDIQHK 529
Query: 593 GAELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSRE-GPTKEYVQHKMMEK 651
G P +L FGCR K+D+IY +E G +L A+SRE K+YVQ + E+
Sbjct: 530 GMNPCPMVLVFGCRQSKIDHIYREETLQAKNKGVFRELYTAYSREPDRPKKYVQDVLQEQ 589
Query: 652 -SSDIWNMLSE-GAYLYVCGDAKSMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGR 709
+ ++ L E G ++YVCGD +MA DV + + I+ +QG L A + L+ R
Sbjct: 590 LAESVYRALKEQGGHIYVCGDV-TMAADVLKAIQRIMTQQGKLSEEDAGVFISRLRDDNR 648
Query: 710 YLRDVW 715
Y D++
Sbjct: 649 YHEDIF 654
>pdb|2QTZ|A Chain A, Crystal Structure Of The Nadp+-Bound Fad-Containing
Fnr-Like Module Of Human Methionine Synthase Reductase
Length = 539
Score = 206 bits (524), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 137/416 (32%), Positives = 207/416 (49%), Gaps = 26/416 (6%)
Query: 325 ELHTPSSDRSCTHLEFDIAGTGLTYETGDHVGVYCENLSETVEEALSLLGLSPDTYFSLH 384
+L T + ++ +E DI+ T +Y+ GD V C N V+ L L L +
Sbjct: 124 QLTTNDAIKTTLLVELDISNTDFSYQPGDAFSVICPNSDSEVQSLLQRLQLEDKREHXVL 183
Query: 385 TDKEDGTPLGKSTLPPTFPP-CSLRTALTKYXXXXXXXXXXXXXXXXXXXXXXTEADRLR 443
+ T +TLP P CSL+ T E RL+
Sbjct: 184 LKIKADTKKKGATLPQHIPAGCSLQFIFTWCLEIRAIPKKAFLRALVDYTSDSAEKRRLQ 243
Query: 444 HLASPAGKDEYAQWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRV 503
L S G +Y++++ + LL+++ FPS +PPL + + P+LQPR YS +SS
Sbjct: 244 ELCSKQGAADYSRFVRDAXACLLDLLLAFPSCQPPLSLLLEHL-PKLQPRPYSCASSSLF 302
Query: 504 APSRIHVTCALV-YEKTPTGRV-HKGLCSTWMK---------NSLPMEKSNDCSWAP--- 549
P ++H +V + T T V KG+C+ W+ N + + + AP
Sbjct: 303 HPGKLHFVFNIVEFLSTATTEVLRKGVCTGWLALLVASVLQPNIHASHEDSGKALAPKIS 362
Query: 550 IFVRQSN-FKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAE--LGPSLLFFGCR 606
IF R +N F LP D +PIIM+GPGTG+APF GFLQ R LQE + G LFFGCR
Sbjct: 363 IFPRTTNSFHLPDDPSIPIIMVGPGTGIAPFIGFLQHREKLQEQHPDGNFGAMWLFFGCR 422
Query: 607 NRKMDYIYEDELNNFVQSGALSQLIVAFSREGPTKE------YVQHKMMEKSSDIWN-ML 659
++ DY++ EL +F++ G L+ L V+FSR+ P E YVQ + + +L
Sbjct: 423 HKDRDYLFRKELRHFLKHGILTHLKVSFSRDAPVGEEEAPAKYVQDNIQLHGQQVARILL 482
Query: 660 SEGAYLYVCGDAKSMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 715
E ++YVCGDAK+MA+DVH L I+ ++ ++ +A + L+ RYL+D+W
Sbjct: 483 QENGHIYVCGDAKNMAKDVHDALVQIISKEVGVEKLEAMKTLATLKEEKRYLQDIW 538
>pdb|4DQK|A Chain A, Crystal Structure Of The Fad Binding Domain Of Cytochrome
P450 Bm3
pdb|4DQK|B Chain B, Crystal Structure Of The Fad Binding Domain Of Cytochrome
P450 Bm3
Length = 391
Score = 204 bits (518), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 132/402 (32%), Positives = 197/402 (49%), Gaps = 23/402 (5%)
Query: 318 SNVAVRKELHTPSSDRSCTHLEFDIAGTGLTYETGDHVGVYCENLSETVEEALSLLGLSP 377
+NV KEL P S RS HLE ++ +Y+ GDH+GV N V + GL
Sbjct: 7 TNVVASKELQQPGSARSTRHLEIELPKEA-SYQEGDHLGVIPRNYEGIVNRVTARFGLDA 65
Query: 378 DTYFSLHTDKED--GTPLGKSTLPPTFPPCSLRTALTKYXXXXXXXXXXXXXXXXXXXXX 435
L ++E PL K+ S+ L +Y
Sbjct: 66 SQQIRLEAEEEKLAHLPLAKT--------VSVEE-LLQYVELQDPVTRTQLRAMAAKTVA 116
Query: 436 XTEADRLRHLASPAGKDEYAQWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYY 495
L L K Y + ++A + ++LE++ ++P+ + F A ++P ++PRYY
Sbjct: 117 PPHKVELEALLE---KQAYKEQVLAKRLTMLELLEKYPACEMKFSEFIA-LLPSIRPRYY 172
Query: 496 SISSSPRVAPSRIHVTCALVYEKTPTGR-VHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQ 554
SISSSPRV + +T ++V + +G +KG+ S ++ + D I Q
Sbjct: 173 SISSSPRVDEKQASITVSVVSGEAWSGYGEYKGIASNYLAEL----QEGDTITCFISTPQ 228
Query: 555 SNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAELGPSLLFFGCRNRKMDYIY 614
S F LP D + P+IM+GPGTG+APFRGF+Q R L+E G LG + L+FGCR+ DY+Y
Sbjct: 229 SEFTLPKDPETPLIMVGPGTGVAPFRGFVQARKQLKEQGQSLGEAHLYFGCRSPHEDYLY 288
Query: 615 EDELNNFVQSGALSQLIVAFSR-EGPTKEYVQHKMMEKSSDIWNMLSEGAYLYVCGDAKS 673
++EL N QS + L AFSR K YVQH M + + +L +GA+ Y+CGD
Sbjct: 289 QEELEN-AQSEGIITLHTAFSRMPNQPKTYVQHVMEQDGKKLIELLDQGAHFYICGDGSQ 347
Query: 674 MARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 715
MA V TL + + + A ++ L+ GRY +DVW
Sbjct: 348 MAPAVEATLMKSYADVHQVSEADARLWLQQLEEKGRYAKDVW 389
>pdb|4DQL|A Chain A, Crystal Structure Of The Fad Binding Domain Of Cytochrome
P450 Bm3 In Complex With Nadp+
pdb|4DQL|B Chain B, Crystal Structure Of The Fad Binding Domain Of Cytochrome
P450 Bm3 In Complex With Nadp+
Length = 393
Score = 203 bits (516), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 132/402 (32%), Positives = 197/402 (49%), Gaps = 23/402 (5%)
Query: 318 SNVAVRKELHTPSSDRSCTHLEFDIAGTGLTYETGDHVGVYCENLSETVEEALSLLGLSP 377
+NV KEL P S RS HLE ++ +Y+ GDH+GV N V + GL
Sbjct: 9 TNVVASKELQQPGSARSTRHLEIELPKEA-SYQEGDHLGVIPRNYEGIVNRVTARFGLDA 67
Query: 378 DTYFSLHTDKED--GTPLGKSTLPPTFPPCSLRTALTKYXXXXXXXXXXXXXXXXXXXXX 435
L ++E PL K+ S+ L +Y
Sbjct: 68 SQQIRLEAEEEKLAHLPLAKTV--------SVEE-LLQYVELQDPVTRTQLRAMAAKTVC 118
Query: 436 XTEADRLRHLASPAGKDEYAQWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYY 495
L L K Y + ++A + ++LE++ ++P+ + F A ++P ++PRYY
Sbjct: 119 PPHKVELEALLE---KQAYKEQVLAKRLTMLELLEKYPACEMKFSEFIA-LLPSIRPRYY 174
Query: 496 SISSSPRVAPSRIHVTCALVYEKTPTGR-VHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQ 554
SISSSPRV + +T ++V + +G +KG+ S ++ + D I Q
Sbjct: 175 SISSSPRVDEKQASITVSVVSGEAWSGYGEYKGIASNYLAEL----QEGDTITCFISTPQ 230
Query: 555 SNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAELGPSLLFFGCRNRKMDYIY 614
S F LP D + P+IM+GPGTG+APFRGF+Q R L+E G LG + L+FGCR+ DY+Y
Sbjct: 231 SEFTLPKDPETPLIMVGPGTGVAPFRGFVQARKQLKEQGQSLGEAHLYFGCRSPHEDYLY 290
Query: 615 EDELNNFVQSGALSQLIVAFSR-EGPTKEYVQHKMMEKSSDIWNMLSEGAYLYVCGDAKS 673
++EL N QS + L AFSR K YVQH M + + +L +GA+ Y+CGD
Sbjct: 291 QEELEN-AQSEGIITLHTAFSRMPNQPKTYVQHVMEQDGKKLIELLDQGAHFYICGDGSQ 349
Query: 674 MARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 715
MA V TL + + + A ++ L+ GRY +DVW
Sbjct: 350 MAPAVEATLMKSYADVHQVSEADARLWLQQLEEKGRYAKDVW 391
>pdb|2QTL|A Chain A, Crystal Structure Of The Fad-Containing Fnr-Like Module Of
Human Methionine Synthase Reductase
Length = 539
Score = 202 bits (513), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 136/416 (32%), Positives = 206/416 (49%), Gaps = 26/416 (6%)
Query: 325 ELHTPSSDRSCTHLEFDIAGTGLTYETGDHVGVYCENLSETVEEALSLLGLSPDTYFSLH 384
+L T + ++ +E DI+ T +Y+ GD V C N V+ L L L +
Sbjct: 124 QLTTNDAIKTTLLVELDISNTDFSYQPGDAFSVICPNSDSEVQSLLQRLQLEDKREHXVL 183
Query: 385 TDKEDGTPLGKSTLPPTFPP-CSLRTALTKYXXXXXXXXXXXXXXXXXXXXXXTEADRLR 443
+ T +TLP P SL+ T E RL+
Sbjct: 184 LKIKADTKKKGATLPQHIPAGXSLQFIFTWCLEIRAIPKKAFLRALVDYTSDSAEKRRLQ 243
Query: 444 HLASPAGKDEYAQWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRV 503
L S G +Y++++ + LL+++ FPS +PPL + + P+LQPR YS +SS
Sbjct: 244 ELCSKQGAADYSRFVRDAXACLLDLLLAFPSCQPPLSLLLEHL-PKLQPRPYSCASSSLF 302
Query: 504 APSRIHVTCALV-YEKTPTGRV-HKGLCSTWMK---------NSLPMEKSNDCSWAP--- 549
P ++H +V + T T V KG+C+ W+ N + + + AP
Sbjct: 303 HPGKLHFVFNIVEFLSTATTEVLRKGVCTGWLALLVASVLQPNIHASHEDSGKALAPKIS 362
Query: 550 IFVRQSN-FKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAE--LGPSLLFFGCR 606
IF R +N F LP D +PIIM+GPGTG+APF GFLQ R LQE + G LFFGCR
Sbjct: 363 IFPRTTNSFHLPDDPSIPIIMVGPGTGIAPFIGFLQHREKLQEQHPDGNFGAMWLFFGCR 422
Query: 607 NRKMDYIYEDELNNFVQSGALSQLIVAFSREGPTKE------YVQHKMMEKSSDIWN-ML 659
++ DY++ EL +F++ G L+ L V+FSR+ P E YVQ + + +L
Sbjct: 423 HKDRDYLFRKELRHFLKHGILTHLKVSFSRDAPVGEEEAPAKYVQDNIQLHGQQVARILL 482
Query: 660 SEGAYLYVCGDAKSMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 715
E ++YVCGDAK+MA+DVH L I+ ++ ++ +A + L+ RYL+D+W
Sbjct: 483 QENGHIYVCGDAKNMAKDVHDALVQIISKEVGVEKLEAMKTLATLKEEKRYLQDIW 538
>pdb|1F20|A Chain A, Crystal Structure Of Rat Neuronal Nitric-Oxide Synthase
FadNADP+ Domain At 1.9a Resolution
Length = 435
Score = 199 bits (505), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 135/406 (33%), Positives = 201/406 (49%), Gaps = 23/406 (5%)
Query: 323 RKELHTPSSDRSCTHLEFDIAGTG-LTYETGDHVGVYCENLSETVEEALSLLGLSPDTYF 381
R+ L +P S RS + G L Y+ GDH+GV+ N + V + L +P
Sbjct: 38 RQNLQSPKSSRSTIFVRLHTNGNQELQYQPGDHLGVFPGNHEDLVNALIERLEDAPPANH 97
Query: 382 SLHTD--KEDGTPLGKSTL---PPTFPPCSLRTALTKYXXXXXXXXXXXXXXXXXXXXXX 436
+ + +E T LG + PPC++ A Y
Sbjct: 98 VVKVEMLEERNTALGVISNWKDESRLPPCTIFQAFKYYLDITTPPTPLQLQQFASLATNE 157
Query: 437 TEADRLRHLASPAGKDEYAQWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYS 496
E RL L G EY +W +++EV+ EFPS + P + LQPRYYS
Sbjct: 158 KEKQRL--LVLSKGLQEYEEWKWGKNPTMVEVLEEFPSIQMP-ATLLLTQLSLLQPRYYS 214
Query: 497 ISSSPRVAPSRIHVTCALV--YEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQ 554
ISSSP + P +H+T A+V + + G VH G+CS+W+ +++D P FVR
Sbjct: 215 ISSSPDMYPDEVHLTVAIVSYHTRDGEGPVHHGVCSSWLNRI----QADDV--VPCFVRG 268
Query: 555 S-NFKLPADAKVPIIMIGPGTGLAPFRGFLQER-FALQEAGAELGPSLLFFGCRNRKMDY 612
+ +F LP + +VP I++GPGTG+APFR F Q+R F +Q G P +L FGCR K+D+
Sbjct: 269 APSFHLPRNPQVPCILVGPGTGIAPFRSFWQQRQFDIQHKGMNPCPMVLVFGCRQSKIDH 328
Query: 613 IYEDELNNFVQSGALSQLIVAFSRE-GPTKEYVQHKMMEK-SSDIWNMLSE-GAYLYVCG 669
IY +E G +L A+SRE K+YVQ + E+ + ++ L E G ++YVCG
Sbjct: 329 IYREETLQAKNKGVFRELYTAYSREPDRPKKYVQDVLQEQLAESVYRALKEQGGHIYVCG 388
Query: 670 DAKSMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 715
D +MA DV + + I+ +QG L A + L+ RY D++
Sbjct: 389 DV-TMAADVLKAIQRIMTQQGKLSEEDAGVFISRLRDDNRYHEDIF 433
>pdb|1DDG|A Chain A, Crystal Structure Of Sir-Fp60
pdb|1DDG|B Chain B, Crystal Structure Of Sir-Fp60
pdb|1DDI|A Chain A, Crystal Structure Of Sir-Fp60
Length = 374
Score = 183 bits (465), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 124/407 (30%), Positives = 208/407 (51%), Gaps = 39/407 (9%)
Query: 310 YDAQHPCRSNVAVRKELHTPSSDRSCTHLEFDIAGTGLTYETGDHVGVYCENLSETVEEA 369
Y P ++++V +++ +S++ H+E D+ +GL Y+ GD +GV+ +N V+E
Sbjct: 6 YSKDAPLVASLSVNQKITGRNSEKDVRHIEIDLGDSGLRYQPGDALGVWYQNDPALVKEL 65
Query: 370 LSLLGLSPDTYFSLHTDKEDGTPLGKSTLPPTFPPCSLRTALTKYXXXXXXXXXXXXXXX 429
+ LL L D E T GK TLP L AL +
Sbjct: 66 VELLWLKGD---------EPVTVEGK-TLP-------LNEALQWHFELTVNTANIVENYA 108
Query: 430 XXXXXXXTEADRLRHLASPAGKDEYAQWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPR 489
T ++ L L K ++ A+ +++ M F A+ + P
Sbjct: 109 TL-----TRSETLLPLVGDKAKLQH----YAATTPIVD-MVRFSPAQLDAEALINLLRP- 157
Query: 490 LQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAP 549
L PR YSI+SS + +HVT +V GR G S+++ + + E
Sbjct: 158 LTPRLYSIASSQAEVENEVHVTVGVVRYDV-EGRARAGGASSFLADRVEEEGE-----VR 211
Query: 550 IFVRQS-NFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAELGPSLLFFGCRNR 608
+F+ + NF+LPA+ + P+IMIGPGTG+APFR F+Q+R A + G + LFFG +
Sbjct: 212 VFIEHNDNFRLPANPETPVIMIGPGTGIAPFRAFMQQRAADEAPGK----NWLFFGNPHF 267
Query: 609 KMDYIYEDELNNFVQSGALSQLIVAFSREGPTKEYVQHKMMEKSSDIWNMLSEGAYLYVC 668
D++Y+ E +V+ G L+++ +A+SR+ K YVQ K+ E+ +++W +++GA++YVC
Sbjct: 268 TEDFLYQVEWQRYVKEGVLTRIDLAWSRDQKEKVYVQDKLREQGAELWRWINDGAHIYVC 327
Query: 669 GDAKSMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 715
GDA MA+DV + L ++ E G +D+ A+ + L++ RY RDV+
Sbjct: 328 GDANRMAKDVEQALLEVIAEFGGMDTEAADEFLSELRVERRYQRDVY 374
>pdb|1B1C|A Chain A, Crystal Structure Of The Fmn-Binding Domain Of Human
Cytochrome P450 Reductase At 1.93a Resolution
Length = 181
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 64/154 (41%), Positives = 87/154 (56%), Gaps = 6/154 (3%)
Query: 105 QKVTIFFGTQTGTAEGFAKALADEARARYDKAIFKVVXXXXXXXXXXXXXXKLKKENIVF 164
+ + +F+G+QTGTAE FA L+ +A RY + + +V
Sbjct: 18 RNIIVFYGSQTGTAEEFANRLSKDAH-RY--GMRGMSADPEEYDLADLSSLPEIDNALVV 74
Query: 165 FFLATYGDGEPTDNAARFYKWFTEQKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEI 224
F +ATYG+G+PTDNA FY W E L +K+ VFGLGN+ YEHFN + K VD+
Sbjct: 75 FCMATYGEGDPTDNAQDFYDWLQETDVD---LSGVKFAVFGLGNKTYEHFNAMGKYVDKR 131
Query: 225 LANQGAKRLVPVGLGDDDQCIEDDFSAWRELVWP 258
L GA+R+ +GLGDDD +E+DF WRE WP
Sbjct: 132 LEQLGAQRIFELGLGDDDGNLEEDFITWREQFWP 165
>pdb|1BVY|F Chain F, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
Length = 191
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 72/153 (47%), Gaps = 13/153 (8%)
Query: 109 IFFGTQTGTAEGFAKALADEARARYDKAIFKVVXXXXXXXXXXXXXXKLKKENIVFFFLA 168
+ +G+ GTAEG A+ LAD A ++ L +E V A
Sbjct: 26 VLYGSNMGTAEGTARDLADIAMSK---------GFAPQVATLDSHAGNLPREGAVLIVTA 76
Query: 169 TYGDGEPTDNAARFYKWFTEQKEGGEWLQKLKYGVFGLGNRQYEH-FNKIAKVVDEILAN 227
+Y +G P DNA +F W +Q E ++ ++Y VFG G++ + + K+ +DE LA
Sbjct: 77 SY-NGHPPDNAKQFVDWL-DQASADE-VKGVRYSVFGCGDKNWATTYQKVPAFIDETLAA 133
Query: 228 QGAKRLVPVGLGDDDQCIEDDFSAWRELVWPEL 260
+GA+ + G D E + WRE +W ++
Sbjct: 134 KGAENIADRGEADASDDFEGTYEEWREHMWSDV 166
>pdb|3HR4|A Chain A, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|C Chain C, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|E Chain E, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|G Chain G, Human Inos Reductase And Calmodulin Complex
Length = 219
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 67/147 (45%), Gaps = 12/147 (8%)
Query: 106 KVTIFFGTQTGTAEGFAKALADEARARYDKAIFKVVXXXXXXXXXXXXXXKLKKENIVFF 165
+VTI F T+TG +E A L A+F L++E ++
Sbjct: 42 RVTILFATETGKSEALAWDLG---------ALFSCAFNPKVVCMDKYRLSCLEEERLLLV 92
Query: 166 FLATYGDGEPTDNAARFYKWFTEQKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEIL 225
+T+G+G+ N + K KE K +Y VFGLG+ Y F A +D+ L
Sbjct: 93 VTSTFGNGDCPGNGEKLKKSLFMLKELN---NKFRYAVFGLGSSMYPRFCAFAHDIDQKL 149
Query: 226 ANQGAKRLVPVGLGDDDQCIEDDFSAW 252
++ GA +L P+G GD+ ED F +W
Sbjct: 150 SHLGASQLTPMGEGDELSGQEDAFRSW 176
>pdb|3LVB|A Chain A, Crystal Structure Of The Ferredoxin:nadp+ Reductase From
Maize Root At 1.7 Angstroms - Test Set Withheld
Length = 311
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 104/228 (45%), Gaps = 23/228 (10%)
Query: 493 RYYSISSSPRVAPSRIHVTCAL-----VYEKTPTGR---VHKGLCSTWMKNSLPMEKSND 544
R YSI+S+ R + T +L VY TG+ G+CS ++ NS P +K
Sbjct: 86 RLYSIAST-RYGDNFDGRTGSLCVRRAVYYDPETGKEDPSKNGVCSNFLCNSKPGDKIQL 144
Query: 545 CSWAPIFVRQSNFKLPA-DAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAELGP-SLLF 602
+ + LP D IMI GTG+APFRG+L+ F G + LF
Sbjct: 145 TGPSGKIML-----LPEEDPNATHIMIATGTGVAPFRGYLRRMFMEDVPNYRFGGLAWLF 199
Query: 603 FGCRNRKMDYIYEDELNNFVQSGALS-QLIVAFSREGPT----KEYVQHKMMEKSSDIWN 657
G N +Y++E ++++ + + A SRE K YVQ K+ E S +I+
Sbjct: 200 LGVANSD-SLLYDEEFTSYLKQYPDNFRYDKALSREQKNRSGGKMYVQDKIEEYSDEIFK 258
Query: 658 MLSEGAYLYVCGDAKSMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQ 705
+L GA++Y CG K M + TL + + +G K + KN Q
Sbjct: 259 LLDGGAHIYFCG-LKGMMPGIQDTLKKVAERRGESWDQKLAQLKKNKQ 305
>pdb|3LO8|A Chain A, Crystal Structure Of The Oxidized Form Of Ferredoxin:nadp+
Reductase From Maize Root At 1.05 Angstroms
Length = 311
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 104/228 (45%), Gaps = 23/228 (10%)
Query: 493 RYYSISSSPRVAPSRIHVTCAL-----VYEKTPTGR---VHKGLCSTWMKNSLPMEKSND 544
R YSI+S+ R + T +L VY TG+ G+CS ++ NS P +K
Sbjct: 86 RLYSIAST-RYGDNFDGRTGSLCVRRAVYYDPETGKEDPSKNGVCSNFLCNSKPGDKIQL 144
Query: 545 CSWAPIFVRQSNFKLPA-DAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAELGP-SLLF 602
+ + LP D IMI GTG+APFRG+L+ F G + LF
Sbjct: 145 TGPSGKIML-----LPEEDPNATHIMIATGTGVAPFRGYLRRMFMEDVPNYRFGGLAWLF 199
Query: 603 FGCRNRKMDYIYEDELNNFVQSGALS-QLIVAFSREGPT----KEYVQHKMMEKSSDIWN 657
G N +Y++E ++++ + + A SRE K YVQ K+ E S +I+
Sbjct: 200 LGVANSD-SLLYDEEFTSYLKQYPDNFRYDKALSREQKNRSGGKMYVQDKIEEYSDEIFK 258
Query: 658 MLSEGAYLYVCGDAKSMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQ 705
+L GA++Y CG K M + TL + + +G K + KN Q
Sbjct: 259 LLDGGAHIYFCG-LKGMMPGIQDTLKKVAERRGESWDQKLAQLKKNKQ 305
>pdb|1JB9|A Chain A, Crystal Structure Of The Ferredoxin:nadp+ Reductase From
Maize Root At 1.7 Angstroms
Length = 316
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 104/228 (45%), Gaps = 23/228 (10%)
Query: 493 RYYSISSSPRVAPSRIHVTCAL-----VYEKTPTGR---VHKGLCSTWMKNSLPMEKSND 544
R YSI+S+ R + T +L VY TG+ G+CS ++ NS P +K
Sbjct: 91 RLYSIAST-RYGDNFDGRTGSLCVRRAVYYDPETGKEDPSKNGVCSNFLCNSKPGDKIQL 149
Query: 545 CSWAPIFVRQSNFKLPA-DAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAELGP-SLLF 602
+ + LP D IMI GTG+APFRG+L+ F G + LF
Sbjct: 150 TGPSGKIML-----LPEEDPNATHIMIATGTGVAPFRGYLRRMFMEDVPNYRFGGLAWLF 204
Query: 603 FGCRNRKMDYIYEDELNNFVQSGALS-QLIVAFSREGPT----KEYVQHKMMEKSSDIWN 657
G N +Y++E ++++ + + A SRE K YVQ K+ E S +I+
Sbjct: 205 LGVANSD-SLLYDEEFTSYLKQYPDNFRYDKALSREQKNRSGGKMYVQDKIEEYSDEIFK 263
Query: 658 MLSEGAYLYVCGDAKSMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQ 705
+L GA++Y CG K M + TL + + +G K + KN Q
Sbjct: 264 LLDGGAHIYFCG-LKGMMPGIQDTLKKVAERRGESWDQKLAQLKKNKQ 310
>pdb|3VO1|A Chain A, Crystal Structure Of Zea Mays Leaf Ferredoxin-Nadp+
Reductase Ii
pdb|3VO1|B Chain B, Crystal Structure Of Zea Mays Leaf Ferredoxin-Nadp+
Reductase Ii
Length = 314
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 93/209 (44%), Gaps = 19/209 (9%)
Query: 493 RYYSISSSP--RVAPSRIHVTCA--LVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWA 548
R YSI+SS S+ C LVY G V KG+CS ++ + P +
Sbjct: 93 RLYSIASSALGDFGDSKTVSLCVKRLVY-TNDQGEVVKGVCSNFLCDLKPGAEVKIT--G 149
Query: 549 PIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQER-FALQEAGAELGPSLLFFGCRN 607
P+ +P D IIM+ GTG+APFR FL + F E G + LF G
Sbjct: 150 PV---GKEMLMPKDPNATIIMLATGTGIAPFRSFLWKMFFEEHEDYKYTGLAWLFLGVPT 206
Query: 608 RKMDYIYEDELNNFVQSGALS-QLIVAFSREGPT----KEYVQHKMMEKSSDIWNML-SE 661
+Y++EL + + +L A SRE K Y+Q +M E ++W +L +
Sbjct: 207 SDT-LLYKEELEKMKEMAPDNFRLDFAVSREQTNAAGEKMYIQTRMAEYKEELWELLKKD 265
Query: 662 GAYLYVCGDAKSMARDVHRTLHTIVQEQG 690
Y+Y+CG K M + + + + + G
Sbjct: 266 NTYVYMCG-LKGMEKGIDDIMLDLAAKDG 293
>pdb|2B5O|A Chain A, Ferredoxin-nadp Reductase
pdb|2B5O|B Chain B, Ferredoxin-nadp Reductase
Length = 402
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 97/209 (46%), Gaps = 17/209 (8%)
Query: 493 RYYSISSSPR--VAPSRIHVTCA--LVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWA 548
R YSI+S+ + ++ C L Y+ +G G+CST++ N LP+ +
Sbjct: 179 RLYSIASTRHGDMEDNKTVSLCVRQLEYQDPESGETVYGVCSTYLCN-LPVGTDDVKITG 237
Query: 549 PIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAEL-GPSLLFFGCRN 607
P+ LP D ++M+ GTG+APFR FL F Q + G + L FG
Sbjct: 238 PV---GKEMLLPDDEDATVVMLATGTGIAPFRAFLWRMFKEQHEDYKFKGKAWLIFGV-P 293
Query: 608 RKMDYIYEDELNNFVQSGALS-QLIVAFSREGPT----KEYVQHKMMEKSSDIWNMLSE- 661
+ +Y+D+ + +L A SRE T K YVQ ++ E + +++ M+ +
Sbjct: 294 YTANILYKDDFEKMAAENPDNFRLTYAISREQKTADGGKVYVQSRVSEYADELFEMIQKP 353
Query: 662 GAYLYVCGDAKSMARDVHRTLHTIVQEQG 690
++Y+CG K M + T +++G
Sbjct: 354 NTHVYMCG-LKGMQPPIDETFTAEAEKRG 381
>pdb|3VO2|A Chain A, Crystal Structure Of Zea Mays Leaf Ferredoxin-Nadp+
Reductase Iii
pdb|3VO2|B Chain B, Crystal Structure Of Zea Mays Leaf Ferredoxin-Nadp+
Reductase Iii
Length = 310
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 95/209 (45%), Gaps = 19/209 (9%)
Query: 493 RYYSISSSP--RVAPSRIHVTCA--LVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWA 548
R YSI+SS S+ C LVY G + KG+CS ++ + P ++
Sbjct: 89 RLYSIASSALGDFGDSKTVSLCVKRLVY-TNDQGEIVKGVCSNFLCDLKP--GADVKITG 145
Query: 549 PIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAEL-GPSLLFFGCRN 607
P+ +P D +IM+ GTG+APFR FL + F + + G + LF G
Sbjct: 146 PV---GKEMLMPKDPNATVIMLATGTGIAPFRSFLWKMFLEEHEDYKFSGLAWLFLGVPT 202
Query: 608 RKMDYIYEDELNNFVQSGALS-QLIVAFSREGPT----KEYVQHKMMEKSSDIWNML-SE 661
+Y++EL + + +L A SRE K Y+Q +M E ++W +L +
Sbjct: 203 SD-SLLYKEELEKMKEMAPDNFRLDFAVSREQTNAAGEKMYIQTRMAEYREELWELLKKD 261
Query: 662 GAYLYVCGDAKSMARDVHRTLHTIVQEQG 690
Y+Y+CG K M + + + + + G
Sbjct: 262 NTYVYMCG-LKGMEKGIDDIMLNLAAKDG 289
>pdb|1GAQ|A Chain A, Crystal Structure Of The Complex Between Ferredoxin And
Ferredoxin-Nadp+ Reductase
pdb|1GAQ|C Chain C, Crystal Structure Of The Complex Between Ferredoxin And
Ferredoxin-Nadp+ Reductase
pdb|1GAW|A Chain A, Crystal Structure Analysis Of The Ferredoxin-Nadp+
Reductase From Maize Leaf
pdb|1GAW|B Chain B, Crystal Structure Analysis Of The Ferredoxin-Nadp+
Reductase From Maize Leaf
Length = 314
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 95/209 (45%), Gaps = 19/209 (9%)
Query: 493 RYYSISSSP--RVAPSRIHVTCA--LVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWA 548
R YSI+SS S+ C L+Y G + KG+CS ++ + P + N
Sbjct: 93 RLYSIASSAIGDFGDSKTVSLCVKRLIY-TNDAGEIVKGVCSNFLCDLQPGD--NVQITG 149
Query: 549 PIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAEL-GPSLLFFGCRN 607
P+ +P D IIM+ GTG+APFR FL + F + + G LF G
Sbjct: 150 PV---GKEMLMPKDPNATIIMLATGTGIAPFRSFLWKMFFEKHDDYKFNGLGWLFLGVPT 206
Query: 608 RKMDYIYEDELNNFVQSGALS-QLIVAFSRE----GPTKEYVQHKMMEKSSDIWNML-SE 661
+Y++E + + ++ A SRE + Y+Q +M E ++W +L +
Sbjct: 207 SS-SLLYKEEFGKMKERAPENFRVDYAVSREQTNAAGERMYIQTRMAEYKEELWELLKKD 265
Query: 662 GAYLYVCGDAKSMARDVHRTLHTIVQEQG 690
Y+Y+CG K M + + + ++ ++ G
Sbjct: 266 NTYVYMCG-LKGMEKGIDDIMVSLAEKDG 293
>pdb|4AF6|A Chain A, Pea Fnr L268v Mutant
pdb|4AF6|B Chain B, Pea Fnr L268v Mutant
Length = 308
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 93/208 (44%), Gaps = 17/208 (8%)
Query: 493 RYYSISSSP--RVAPSRIHVTCA--LVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWA 548
R YSI+SS S+ C LVY G V KG+CS ++ + P +
Sbjct: 87 RLYSIASSAIGDFGDSKTVSLCVKRLVY-TNDAGEVVKGVCSNFLCDLKPGSEVKIT--G 143
Query: 549 PIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAEL-GPSLLFFGCRN 607
P+ +P D +IM+G GTG+APFR FL + F + + G + LF G
Sbjct: 144 PV---GKEMLMPKDPNATVIMLGTGTGIAPFRSFLWKMFFEKHEDYQFNGLAWLFLGVPT 200
Query: 608 RKMDYIYEDELNNFVQSGALSQLIVAFSREGPT----KEYVQHKMMEKSSDIWNML-SEG 662
E+ ++ +L A SRE K Y+Q +M + + ++W +L +
Sbjct: 201 SSSLLYKEEFEKMKEKAPENFRLDFAVSREQVNDKGEKMYIQTRMAQYAEELWELLKKDN 260
Query: 663 AYLYVCGDAKSMARDVHRTLHTIVQEQG 690
++Y+CG K M + + + ++ + G
Sbjct: 261 TFVYMCG-VKGMEKGIDDIMVSLAAKDG 287
>pdb|3MHP|A Chain A, Fnr-Recruitment To The Thylakoid
pdb|3MHP|B Chain B, Fnr-Recruitment To The Thylakoid
Length = 296
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 93/208 (44%), Gaps = 17/208 (8%)
Query: 493 RYYSISSSP--RVAPSRIHVTCA--LVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWA 548
R YSI+SS S+ C LVY G V KG+CS ++ + P +
Sbjct: 74 RLYSIASSAIGDFGDSKTVSLCVKRLVY-TNDAGEVVKGVCSNFLCDLKPGSEVKIT--G 130
Query: 549 PIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAEL-GPSLLFFGCRN 607
P+ +P D +IM+G GTG+APFR FL + F + + G + LF G
Sbjct: 131 PV---GKEMLMPKDPNATVIMLGTGTGIAPFRSFLWKMFFEKHEDYQFNGLAWLFLGVPT 187
Query: 608 RKMDYIYEDELNNFVQSGALSQLIVAFSREGPT----KEYVQHKMMEKSSDIWNML-SEG 662
E+ ++ +L A SRE K Y+Q +M + + ++W +L +
Sbjct: 188 SSSLLYKEEFEKMKEKAPENFRLDFAVSREQVNDKGEKMYIQTRMAQYAEELWELLKKDN 247
Query: 663 AYLYVCGDAKSMARDVHRTLHTIVQEQG 690
++Y+CG K M + + + ++ + G
Sbjct: 248 TFVYMCG-LKGMEKGIDDIMVSLAAKDG 274
>pdb|1QGA|A Chain A, Pea Fnr Y308w Mutant In Complex With Nadp+
pdb|1QGA|B Chain B, Pea Fnr Y308w Mutant In Complex With Nadp+
Length = 308
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 93/208 (44%), Gaps = 17/208 (8%)
Query: 493 RYYSISSSP--RVAPSRIHVTCA--LVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWA 548
R YSI+SS S+ C LVY G V KG+CS ++ + P +
Sbjct: 87 RLYSIASSAIGDFGDSKTVSLCVKRLVYTND-AGEVVKGVCSNFLCDLKPGSEVKIT--G 143
Query: 549 PIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAEL-GPSLLFFGCRN 607
P+ +P D +IM+G GTG+APFR FL + F + + G + LF G
Sbjct: 144 PV---GKEMLMPKDPNATVIMLGTGTGIAPFRSFLWKMFFEKHEDYQFNGLAWLFLGVPT 200
Query: 608 RKMDYIYEDELNNFVQSGALSQLIVAFSREGPT----KEYVQHKMMEKSSDIWNML-SEG 662
E+ ++ +L A SRE K Y+Q +M + + ++W +L +
Sbjct: 201 SSSLLYKEEFEKMKEKAPENFRLDFAVSREQVNDKGEKMYIQTRMAQYAEELWELLKKDN 260
Query: 663 AYLYVCGDAKSMARDVHRTLHTIVQEQG 690
++Y+CG K M + + + ++ + G
Sbjct: 261 TFVYMCG-LKGMEKGIDDIMVSLAAKDG 287
>pdb|1QG0|A Chain A, Wild-type Pea Fnr
pdb|1QG0|B Chain B, Wild-type Pea Fnr
Length = 308
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 93/208 (44%), Gaps = 17/208 (8%)
Query: 493 RYYSISSSP--RVAPSRIHVTCA--LVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWA 548
R YSI+SS S+ C LVY G V KG+CS ++ + P +
Sbjct: 87 RLYSIASSAIGDFGDSKTVSLCVKRLVYTND-AGEVVKGVCSNFLCDLKPGSEVKIT--G 143
Query: 549 PIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAEL-GPSLLFFGCRN 607
P+ +P D +IM+G GTG+APFR FL + F + + G + LF G
Sbjct: 144 PV---GKEMLMPKDPNATVIMLGTGTGIAPFRSFLWKMFFEKHEDYQFNGLAWLFLGVPT 200
Query: 608 RKMDYIYEDELNNFVQSGALSQLIVAFSREGPT----KEYVQHKMMEKSSDIWNML-SEG 662
E+ ++ +L A SRE K Y+Q +M + + ++W +L +
Sbjct: 201 SSSLLYKEEFEKMKEKAPENFRLDFAVSREQVNDKGEKMYIQTRMAQYAEELWELLKKDN 260
Query: 663 AYLYVCGDAKSMARDVHRTLHTIVQEQG 690
++Y+CG K M + + + ++ + G
Sbjct: 261 TFVYMCG-LKGMEKGIDDIMVSLAAKDG 287
>pdb|1QFY|A Chain A, Pea Fnr Y308s Mutant In Complex With Nadp+
pdb|1QFY|B Chain B, Pea Fnr Y308s Mutant In Complex With Nadp+
pdb|1QFZ|A Chain A, Pea Fnr Y308s Mutant In Complex With Nadph
pdb|1QFZ|B Chain B, Pea Fnr Y308s Mutant In Complex With Nadph
Length = 308
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 93/208 (44%), Gaps = 17/208 (8%)
Query: 493 RYYSISSSP--RVAPSRIHVTCA--LVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWA 548
R YSI+SS S+ C LVY G V KG+CS ++ + P +
Sbjct: 87 RLYSIASSAIGDFGDSKTVSLCVKRLVY-TNDAGEVVKGVCSNFLCDLKPGSEVKIT--G 143
Query: 549 PIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAEL-GPSLLFFGCRN 607
P+ +P D +IM+G GTG+APFR FL + F + + G + LF G
Sbjct: 144 PV---GKEMLMPKDPNATVIMLGTGTGIAPFRSFLWKMFFEKHEDYQFNGLAWLFLGVPT 200
Query: 608 RKMDYIYEDELNNFVQSGALSQLIVAFSREGPT----KEYVQHKMMEKSSDIWNML-SEG 662
E+ ++ +L A SRE K Y+Q +M + + ++W +L +
Sbjct: 201 SSSLLYKEEFEKMKEKAPENFRLDFAVSREQVNDKGEKMYIQTRMAQYAEELWELLKKDN 260
Query: 663 AYLYVCGDAKSMARDVHRTLHTIVQEQG 690
++Y+CG K M + + + ++ + G
Sbjct: 261 TFVYMCG-LKGMEKGIDDIMVSLAAKDG 287
>pdb|1SM4|A Chain A, Crystal Structure Analysis Of The Ferredoxin-Nadp+
Reductase From Paprika
pdb|1SM4|B Chain B, Crystal Structure Analysis Of The Ferredoxin-Nadp+
Reductase From Paprika
Length = 296
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 92/208 (44%), Gaps = 17/208 (8%)
Query: 493 RYYSISSSP--RVAPSRIHVTCA--LVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWA 548
R YSI+SS S+ C LVY G KG+CS ++ + P
Sbjct: 75 RLYSIASSALGDFGDSKTVSLCVKRLVY-TNDKGEEVKGVCSNFLCDLKPGADVKIT--G 131
Query: 549 PIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAEL-GPSLLFFGCRN 607
P+ +P D +IM+G GTG+APFR FL + F + + G + LF G
Sbjct: 132 PV---GKEMLMPKDPNATVIMLGTGTGIAPFRSFLWKMFFEKHDDYKFNGLAWLFLGVPT 188
Query: 608 RKMDYIYEDELNNFVQSGALSQLIVAFSREGPT----KEYVQHKMMEKSSDIWNML-SEG 662
E+ ++ +L A SRE K Y+Q +M + + ++W +L +
Sbjct: 189 SSSLLYKEEFEKMKEKAPENFRLDFAVSREQTNEKGEKMYIQTRMAQYAEELWTLLKKDN 248
Query: 663 AYLYVCGDAKSMARDVHRTLHTIVQEQG 690
++Y+CG K M + + + ++ ++G
Sbjct: 249 TFVYMCG-LKGMEQGIDDIMSSLAAKEG 275
>pdb|1W35|A Chain A, Ferredoxin-Nadp+ Reductase (Mutation: Y 303 W)
pdb|1W87|A Chain A, Ferredoxin-Nadp Reductase (Mutation: Y 303 W) Complexed
With Nadp By Cocrystallization
pdb|1W87|B Chain B, Ferredoxin-Nadp Reductase (Mutation: Y 303 W) Complexed
With Nadp By Cocrystallization
Length = 304
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 103/238 (43%), Gaps = 26/238 (10%)
Query: 493 RYYSISSSPR---VAPSRIHVTC-ALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWA 548
R YSI+S+ V I + L Y+ +G G+CST++ + P +
Sbjct: 78 RLYSIASTRHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEVKIT--G 135
Query: 549 PIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAE-----LGPSLLFF 603
P+ LP D + +IM+ GTG+AP R +L F E A G S L F
Sbjct: 136 PV---GKEMLLPDDPEANVIMLATGTGIAPMRTYLWRMFKDAERAANPEYQFKGFSWLVF 192
Query: 604 GCRNRKMDYIYEDELNNFVQSGALS-QLIVAFSREGPTKE----YVQHKMMEKSSDIWNM 658
G + +Y++EL Q + +L A SRE + Y+Q ++ E + +W +
Sbjct: 193 GVPTTP-NILYKEELEEIQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHADQLWQL 251
Query: 659 L-SEGAYLYVCGDAKSMARDVHRTLHTIVQEQGSLDSSKAESMVKNLQMTGRYLRDVW 715
+ ++ + Y+CG + M + L ++G S K+L+ GR+ + W
Sbjct: 252 IKNQKTHTYICG-LRGMEEGIDAALSAAAAKEGVTWSDYQ----KDLKKAGRWHVETW 304
>pdb|1BX0|A Chain A, Ferredoxin:nadp+ Oxidoreductase (Ferredoxin Reductase)
Mutant E312l
Length = 314
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 91/208 (43%), Gaps = 17/208 (8%)
Query: 493 RYYSISSSP--RVAPSRIHVTCA--LVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWA 548
R YSI+SS ++ C L+Y G KG+CS ++ + P +
Sbjct: 93 RLYSIASSALGDFGDAKSVSLCVKRLIYTND-AGETIKGVCSNFLCDLKPGAEVKLT--G 149
Query: 549 PIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAEL-GPSLLFFGCRN 607
P+ +P D IIM+G GTG+APFR FL + F + + G + LF G
Sbjct: 150 PV---GKEMLMPKDPNATIIMLGTGTGIAPFRSFLWKMFFEKHDDYKFNGLAWLFLGVPT 206
Query: 608 RKMDYIYEDELNNFVQSGALSQLIVAFSREGPT----KEYVQHKMMEKSSDIWNML-SEG 662
E+ ++ +L A SRE K Y+Q +M + + ++W ML +
Sbjct: 207 SSSLLYKEEFEKMKEKAPDNFRLDFAVSREQTNEKGEKMYIQTRMAQYAVELWEMLKKDN 266
Query: 663 AYLYVCGDAKSMARDVHRTLHTIVQEQG 690
Y Y+CG K M + + + ++ +G
Sbjct: 267 TYFYMCG-LKGMEKGIDDIMVSLAAAEG 293
>pdb|1FNB|A Chain A, Refined Crystal Structure Of Spinach Ferredoxin Reductase
At 1.7 Angstroms Resolution: Oxidized, Reduced, And 2'-
Phospho-5'-Amp Bound States
pdb|1FNC|A Chain A, Refined Crystal Structure Of Spinach Ferredoxin Reductase
At 1.7 Angstroms Resolution: Oxidized, Reduced, And 2'-
Phospho-5'-Amp Bound States
pdb|1FND|A Chain A, Refined Crystal Structure Of Spinach Ferredoxin Reductase
At 1.7 Angstroms Resolution: Oxidized, Reduced, And 2'-
Phospho-5'-Amp Bound States
Length = 314
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 92/208 (44%), Gaps = 17/208 (8%)
Query: 493 RYYSISSSP--RVAPSRIHVTCA--LVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWA 548
R YSI+SS ++ C L+Y G KG+CS ++ + P +
Sbjct: 93 RLYSIASSALGDFGDAKSVSLCVKRLIYTND-AGETIKGVCSNFLCDLKPGAEVKLT--G 149
Query: 549 PIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAEL-GPSLLFFGCRN 607
P+ +P D IIM+G GTG+APFR FL + F + + G + LF G
Sbjct: 150 PV---GKEMLMPKDPNATIIMLGTGTGIAPFRSFLWKMFFEKHDDYKFNGLAWLFLGVPT 206
Query: 608 RKMDYIYEDELNNFVQSGALSQLIVAFSREGPT----KEYVQHKMMEKSSDIWNML-SEG 662
E+ ++ +L A SRE K Y+Q +M + + ++W ML +
Sbjct: 207 SSSLLYKEEFEKMKEKAPDNFRLDFAVSREQTNEKGEKMYIQTRMAQYAVELWEMLKKDN 266
Query: 663 AYLYVCGDAKSMARDVHRTLHTIVQEQG 690
Y+Y+CG K M + + + ++ +G
Sbjct: 267 TYVYMCG-LKGMEKGIDDIMVSLAAAEG 293
>pdb|1QUF|A Chain A, X-Ray Structure Of A Complex Nadp+-Ferredoxin:nadp+
Reductase From The Cyanobacterium Anabaena Pcc 7119 At
2.25 Angstroms
Length = 304
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 86/192 (44%), Gaps = 21/192 (10%)
Query: 493 RYYSISSSPR---VAPSRIHVTC-ALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWA 548
R YSI+S+ V I + L Y+ +G G+CST++ + P +
Sbjct: 78 RLYSIASTRHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEVKIT--G 135
Query: 549 PIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAE-----LGPSLLFF 603
P+ LP D + +IM+ GTG+AP R +L F E A G S L F
Sbjct: 136 PV---GKEMLLPDDPEANVIMLATGTGIAPMRTYLWRMFKDAERAANPEYQFKGFSWLVF 192
Query: 604 GCRNRKMDYIYEDELNNFVQSGALS-QLIVAFSREGPTKE----YVQHKMMEKSSDIWNM 658
G + +Y++EL Q + +L A SRE + Y+Q ++ E + +W +
Sbjct: 193 GVPTTP-NILYKEELEEIQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHADQLWQL 251
Query: 659 L-SEGAYLYVCG 669
+ +E + Y+CG
Sbjct: 252 IKNEKTHTYICG 263
>pdb|1BX1|A Chain A, Ferredoxin:nadp+ Oxidoreductase (Ferredoxin Reductase)
Mutant E312q
Length = 314
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 91/208 (43%), Gaps = 17/208 (8%)
Query: 493 RYYSISSSP--RVAPSRIHVTCA--LVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWA 548
R YSI+SS ++ C L+Y G KG+CS ++ + P +
Sbjct: 93 RLYSIASSALGDFGDAKSVSLCVKRLIYTND-AGETIKGVCSNFLCDLKPGAEVKLT--G 149
Query: 549 PIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAEL-GPSLLFFGCRN 607
P+ +P D IIM+G GTG+APFR FL + F + + G + LF G
Sbjct: 150 PV---GKEMLMPKDPNATIIMLGTGTGIAPFRSFLWKMFFEKHDDYKFNGLAWLFLGVPT 206
Query: 608 RKMDYIYEDELNNFVQSGALSQLIVAFSREGPT----KEYVQHKMMEKSSDIWNML-SEG 662
E+ ++ +L A SRE K Y+Q +M + + ++W ML +
Sbjct: 207 SSSLLYKEEFEKMKEKAPDNFRLDFAVSREQTNEKGEKMYIQTRMAQYAVELWEMLKKDN 266
Query: 663 AYLYVCGDAKSMARDVHRTLHTIVQEQG 690
Y Y+CG K M + + + ++ +G
Sbjct: 267 TYFYMCG-LKGMEKGIDDIMVSLAAAEG 293
>pdb|1FRQ|A Chain A, Ferredoxin:nadp+ Oxidoreductase (Ferredoxin Reductase)
Mutant E312a
Length = 314
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 91/208 (43%), Gaps = 17/208 (8%)
Query: 493 RYYSISSSP--RVAPSRIHVTCA--LVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWA 548
R YSI+SS ++ C L+Y G KG+CS ++ + P +
Sbjct: 93 RLYSIASSALGDFGDAKSVSLCVKRLIYTND-AGETIKGVCSNFLCDLKPGAEVKLT--G 149
Query: 549 PIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAEL-GPSLLFFGCRN 607
P+ +P D IIM+G GTG+APFR FL + F + + G + LF G
Sbjct: 150 PV---GKEMLMPKDPNATIIMLGTGTGIAPFRSFLWKMFFEKHDDYKFNGLAWLFLGVPT 206
Query: 608 RKMDYIYEDELNNFVQSGALSQLIVAFSREGPT----KEYVQHKMMEKSSDIWNML-SEG 662
E+ ++ +L A SRE K Y+Q +M + + ++W ML +
Sbjct: 207 SSSLLYKEEFEKMKEKAPDNFRLDFAVSREQTNEKGEKMYIQTRMAQYAVELWEMLKKDN 266
Query: 663 AYLYVCGDAKSMARDVHRTLHTIVQEQG 690
Y Y+CG K M + + + ++ +G
Sbjct: 267 TYFYMCG-LKGMEKGIDDIMVSLAAAEG 293
>pdb|2X3U|A Chain A, Ferredoxin-Nadp Reductase Mutant With Tyr 303 Replaced By
Phe (Y303f)
Length = 303
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 87/192 (45%), Gaps = 21/192 (10%)
Query: 493 RYYSISSSPR---VAPSRIHVTC-ALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWA 548
R YSI+S+ V I + L Y+ +G G+CST++ + P +
Sbjct: 77 RLYSIASTRHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEVKIT--G 134
Query: 549 PIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAE-----LGPSLLFF 603
P+ LP D + +IM+ GTG+AP R +L F E A G S L F
Sbjct: 135 PV---GKEMLLPDDPEANVIMLATGTGIAPMRTYLWRMFKDAERAANPEYQFKGFSWLVF 191
Query: 604 GCRNRKMDYIYEDELNNFVQSGALS-QLIVAFSREGPTKE----YVQHKMMEKSSDIWNM 658
G + +Y++EL Q + +L A SRE + Y+Q ++ E + ++W +
Sbjct: 192 GVPTTP-NILYKEELEEIQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHADELWQL 250
Query: 659 L-SEGAYLYVCG 669
+ ++ + Y+CG
Sbjct: 251 IKNQKTHTYICG 262
>pdb|1EWY|A Chain A, Anabaena Pcc7119 Ferredoxin:ferredoxin-Nadp+-Reductase
Complex
pdb|1EWY|B Chain B, Anabaena Pcc7119 Ferredoxin:ferredoxin-Nadp+-Reductase
Complex
Length = 303
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 87/192 (45%), Gaps = 21/192 (10%)
Query: 493 RYYSISSSPR---VAPSRIHVTC-ALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWA 548
R YSI+S+ V I + L Y+ +G G+CST++ + P +
Sbjct: 77 RLYSIASTRHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEVKIT--G 134
Query: 549 PIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAE-----LGPSLLFF 603
P+ LP D + +IM+ GTG+AP R +L F E A G S L F
Sbjct: 135 PV---GKEMLLPDDPEANVIMLATGTGIAPMRTYLWRMFKDAERAANPEYQFKGFSWLVF 191
Query: 604 GCRNRKMDYIYEDELNNFVQSGALS-QLIVAFSREGPTKE----YVQHKMMEKSSDIWNM 658
G + +Y++EL Q + +L A SRE + Y+Q ++ E + ++W +
Sbjct: 192 GVPTTP-NILYKEELEEIQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHADELWQL 250
Query: 659 L-SEGAYLYVCG 669
+ ++ + Y+CG
Sbjct: 251 IKNQKTHTYICG 262
>pdb|1E64|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Lys 75 Replaced By
Gln (K75q)
Length = 304
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 87/194 (44%), Gaps = 21/194 (10%)
Query: 491 QPRYYSISSSPR---VAPSRIHVTC-ALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCS 546
Q R YSI+S+ V I + L Y+ +G G+CST++ + P +
Sbjct: 76 QLRLYSIASTRHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEVKIT- 134
Query: 547 WAPIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAE-----LGPSLL 601
P+ LP D + +IM+ GTG+AP R +L F E A G S L
Sbjct: 135 -GPV---GKEMLLPDDPEANVIMLATGTGIAPMRTYLWRMFKDAERAANPEYQFKGFSWL 190
Query: 602 FFGCRNRKMDYIYEDELNNFVQSGALS-QLIVAFSREGPTKE----YVQHKMMEKSSDIW 656
FG + +Y++EL Q + +L A SRE + Y+Q ++ E + +W
Sbjct: 191 VFGVPTTP-NILYKEELEEIQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHADQLW 249
Query: 657 NML-SEGAYLYVCG 669
++ ++ + Y+CG
Sbjct: 250 QLIKNQKTHTYICG 263
>pdb|4AF7|A Chain A, Pea Fnr C266m Mutant
pdb|4AF7|B Chain B, Pea Fnr C266m Mutant
Length = 308
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 92/208 (44%), Gaps = 17/208 (8%)
Query: 493 RYYSISSSP--RVAPSRIHVTCA--LVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWA 548
R YSI+SS S+ C LVY G V KG+CS ++ + P +
Sbjct: 87 RLYSIASSAIGDFGDSKTVSLCVKRLVY-TNDAGEVVKGVCSNFLCDLKPGSEVKIT--G 143
Query: 549 PIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAEL-GPSLLFFGCRN 607
P+ +P D +IM+G GTG+APFR FL + F + + G + LF G
Sbjct: 144 PV---GKEMLMPKDPNATVIMLGTGTGIAPFRSFLWKMFFEKHEDYQFNGLAWLFLGVPT 200
Query: 608 RKMDYIYEDELNNFVQSGALSQLIVAFSREGPT----KEYVQHKMMEKSSDIWNML-SEG 662
E+ ++ +L A SRE K Y+Q +M + + ++W +L +
Sbjct: 201 SSSLLYKEEFEKMKEKAPENFRLDFAVSREQVNDKGEKMYIQTRMAQYAEELWELLKKDN 260
Query: 663 AYLYVCGDAKSMARDVHRTLHTIVQEQG 690
++Y+ G K M + + + ++ + G
Sbjct: 261 TFVYMMG-LKGMEKGIDDIMVSLAAKDG 287
>pdb|1FRN|A Chain A, The Involvement Of Ser96 In The Catalytic Mechanism Of
Ferredoxin-Nadp+ Reductase: Structure-Function
Relationship As Studied By Site-Directed Mutagenesis And
X- Ray Crystallography
Length = 314
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 78/175 (44%), Gaps = 12/175 (6%)
Query: 522 GRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRG 581
G KG+CS ++ + P + P+ +P D IIM+G GTG+APFR
Sbjct: 125 GETIKGVCSNFLCDLKPGAEVKLT--GPV---GKEMLMPKDPNATIIMLGTGTGIAPFRS 179
Query: 582 FLQERFALQEAGAEL-GPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSREGPT 640
FL + F + + G + LF G E+ ++ +L A SRE
Sbjct: 180 FLWKMFFEKHDDYKFNGLAWLFLGVPTSSSLLYKEEFEKMKEKAPDNFRLDFAVSREQTN 239
Query: 641 ----KEYVQHKMMEKSSDIWNML-SEGAYLYVCGDAKSMARDVHRTLHTIVQEQG 690
K Y+Q +M + + ++W ML + Y Y+CG K M + + + ++ +G
Sbjct: 240 EKGEKMYIQTRMAQYAVELWEMLKKDNTYFYMCG-LKGMEKGIDDIMVSLAAAEG 293
>pdb|1GR1|A Chain A, Structure Of Ferredoxin-Nadp+ Reductase With Glu 139
Replaced By Lys (E139k)
Length = 303
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 86/192 (44%), Gaps = 21/192 (10%)
Query: 493 RYYSISSSPR---VAPSRIHVTC-ALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWA 548
R YSI+S+ V I + L Y+ +G G+CST++ + P +
Sbjct: 77 RLYSIASTRHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEVKIT--G 134
Query: 549 PIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAE-----LGPSLLFF 603
P+ LP D + +IM+ GTG+AP R +L F E A G S L F
Sbjct: 135 PV---GKKMLLPDDPEANVIMLATGTGIAPMRTYLWRMFKDAERAANPEYQFKGFSWLVF 191
Query: 604 GCRNRKMDYIYEDELNNFVQSGALS-QLIVAFSREGPTKE----YVQHKMMEKSSDIWNM 658
G + +Y++EL Q + +L A SRE + Y+Q ++ E + +W +
Sbjct: 192 GVPTTP-NILYKEELEEIQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHADQLWQL 250
Query: 659 L-SEGAYLYVCG 669
+ ++ + Y+CG
Sbjct: 251 IKNQKTHTYICG 262
>pdb|1GO2|A Chain A, Structure Of Ferredoxin-nadp+ Reductase With Lys 72
Replaced By Glu (k72e)
Length = 304
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 86/192 (44%), Gaps = 21/192 (10%)
Query: 493 RYYSISSSPR---VAPSRIHVTC-ALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWA 548
R YSI+S+ V I + L Y+ +G G+CST++ + P +
Sbjct: 78 RLYSIASTRHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEVKIT--G 135
Query: 549 PIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAE-----LGPSLLFF 603
P+ LP D + +IM+ GTG+AP R +L F E A G S L F
Sbjct: 136 PV---GKEMLLPDDPEANVIMLATGTGIAPMRTYLWRMFKDAERAANPEYQFKGFSWLVF 192
Query: 604 GCRNRKMDYIYEDELNNFVQSGALS-QLIVAFSREGPTKE----YVQHKMMEKSSDIWNM 658
G + +Y++EL Q + +L A SRE + Y+Q ++ E + +W +
Sbjct: 193 GVPTTP-NILYKEELEEIQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHADQLWQL 251
Query: 659 L-SEGAYLYVCG 669
+ ++ + Y+CG
Sbjct: 252 IKNQKTHTYICG 263
>pdb|1QUE|A Chain A, X-Ray Structure Of The Ferredoxin:nadp+ Reductase From The
Cyanobacterium Anabaena Pcc 7119 At 1.8 Angstroms
Length = 303
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 86/192 (44%), Gaps = 21/192 (10%)
Query: 493 RYYSISSSPR---VAPSRIHVTC-ALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWA 548
R YSI+S+ V I + L Y+ +G G+CST++ + P +
Sbjct: 77 RLYSIASTRHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEVKIT--G 134
Query: 549 PIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAE-----LGPSLLFF 603
P+ LP D + +IM+ GTG+AP R +L F E A G S L F
Sbjct: 135 PV---GKEMLLPDDPEANVIMLATGTGIAPMRTYLWRMFKDAERAANPEYQFKGFSWLVF 191
Query: 604 GCRNRKMDYIYEDELNNFVQSGALS-QLIVAFSREGPTKE----YVQHKMMEKSSDIWNM 658
G + +Y++EL Q + +L A SRE + Y+Q ++ E + +W +
Sbjct: 192 GVPTTP-NILYKEELEEIQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHADQLWQL 250
Query: 659 L-SEGAYLYVCG 669
+ ++ + Y+CG
Sbjct: 251 IKNQKTHTYICG 262
>pdb|1E62|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Lys 75 Replaced By
Arg (K75r)
Length = 304
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 76/167 (45%), Gaps = 17/167 (10%)
Query: 514 LVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQSNFKLPADAKVPIIMIGPG 573
L Y+ +G G+CST++ + P + P+ LP D + +IM+ G
Sbjct: 103 LEYKHPESGETVYGVCSTYLTHIEPGSEVKIT--GPV---GKEMLLPDDPEANVIMLATG 157
Query: 574 TGLAPFRGFLQERFALQEAGAE-----LGPSLLFFGCRNRKMDYIYEDELNNFVQSGALS 628
TG+AP R +L F E A G S L FG + +Y++EL Q +
Sbjct: 158 TGIAPMRTYLWRMFKDAERAANPEYQFKGFSWLVFGVPTTP-NILYKEELEEIQQKYPDN 216
Query: 629 -QLIVAFSREGPTKE----YVQHKMMEKSSDIWNML-SEGAYLYVCG 669
+L A SRE + Y+Q ++ E + +W ++ ++ + Y+CG
Sbjct: 217 FRLTYAISREQKNPQGGRMYIQDRVAEHADQLWQLIKNQKTHTYICG 263
>pdb|1OGJ|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Leu 263 Replaced By
Pro (L263p)
Length = 303
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 76/167 (45%), Gaps = 17/167 (10%)
Query: 514 LVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQSNFKLPADAKVPIIMIGPG 573
L Y+ +G G+CST++ + P + P+ LP D + +IM+ G
Sbjct: 102 LEYKHPESGETVYGVCSTYLTHIEPGSEVKIT--GPV---GKEMLLPDDPEANVIMLATG 156
Query: 574 TGLAPFRGFLQERFALQEAGAE-----LGPSLLFFGCRNRKMDYIYEDELNNFVQSGALS 628
TG+AP R +L F E A G S L FG + +Y++EL Q +
Sbjct: 157 TGIAPMRTYLWRMFKDAERAANPEYQFKGFSWLVFGVPTTP-NILYKEELEEIQQKYPDN 215
Query: 629 -QLIVAFSREGPTKE----YVQHKMMEKSSDIWNML-SEGAYLYVCG 669
+L A SRE + Y+Q ++ E + +W ++ ++ + Y+CG
Sbjct: 216 FRLTYAISREQKNPQGGRMYIQDRVAEHADQLWQLIKNQKTHTYICG 262
>pdb|1QGZ|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Leu 78 Replaced By
Asp (L78d)
Length = 295
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 76/167 (45%), Gaps = 17/167 (10%)
Query: 514 LVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQSNFKLPADAKVPIIMIGPG 573
L Y+ +G G+CST++ + P + P+ LP D + +IM+ G
Sbjct: 94 LEYKHPESGETVYGVCSTYLTHIEPGSEVKIT--GPV---GKEMLLPDDPEANVIMLATG 148
Query: 574 TGLAPFRGFLQERFALQEAGAE-----LGPSLLFFGCRNRKMDYIYEDELNNFVQSGALS 628
TG+AP R +L F E A G S L FG + +Y++EL Q +
Sbjct: 149 TGIAPMRTYLWRMFKDAERAANPEYQFKGFSWLVFGVPTTP-NILYKEELEEIQQKYPDN 207
Query: 629 -QLIVAFSREGPTKE----YVQHKMMEKSSDIWNML-SEGAYLYVCG 669
+L A SRE + Y+Q ++ E + +W ++ ++ + Y+CG
Sbjct: 208 FRLTYAISREQKNPQGGRMYIQDRVAEHADQLWQLIKNQKTHTYICG 254
>pdb|1W34|A Chain A, Ferredoxin-Nadp Reductase (Mutation: Y 303 S)
Length = 304
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 86/192 (44%), Gaps = 21/192 (10%)
Query: 493 RYYSISSSPR---VAPSRIHVTC-ALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWA 548
R YSI+S+ V I + L Y+ +G G+CST++ + P +
Sbjct: 78 RLYSIASTRHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEVKIT--G 135
Query: 549 PIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAE-----LGPSLLFF 603
P+ LP D + +IM+ GTG+AP R +L F E A G S L F
Sbjct: 136 PV---GKEMLLPDDPEANVIMLATGTGIAPMRTYLWRMFKDAERAANPEYQFKGFSWLVF 192
Query: 604 GCRNRKMDYIYEDELNNFVQSGALS-QLIVAFSREGPTKE----YVQHKMMEKSSDIWNM 658
G + +Y++EL Q + +L A SRE + Y+Q ++ E + +W +
Sbjct: 193 GVPTTP-NILYKEELEEIQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHADQLWQL 251
Query: 659 L-SEGAYLYVCG 669
+ ++ + Y+CG
Sbjct: 252 IKNQKTHTYICG 263
>pdb|1GJR|A Chain A, Ferredoxin-Nadp+ Reductase Complexed With Nadp+ By
Cocrystallization
Length = 304
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 86/192 (44%), Gaps = 21/192 (10%)
Query: 493 RYYSISSSPR---VAPSRIHVTC-ALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWA 548
R YSI+S+ V I + L Y+ +G G+CST++ + P +
Sbjct: 78 RLYSIASTRHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEVKIT--G 135
Query: 549 PIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAE-----LGPSLLFF 603
P+ LP D + +IM+ GTG+AP R +L F E A G S L F
Sbjct: 136 PV---GKEMLLPDDPEANVIMLATGTGIAPMRTYLWRMFKDAERAANPEYQFKGFSWLVF 192
Query: 604 GCRNRKMDYIYEDELNNFVQSGALS-QLIVAFSREGPTKE----YVQHKMMEKSSDIWNM 658
G + +Y++EL Q + +L A SRE + Y+Q ++ E + +W +
Sbjct: 193 GVPTTP-NILYKEELEEIQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHADQLWQL 251
Query: 659 L-SEGAYLYVCG 669
+ ++ + Y+CG
Sbjct: 252 IKNQKTHTYICG 263
>pdb|1QH0|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Leu 76 Mutated By
Asp And Leu 78 Mutated By Asp
Length = 295
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 76/167 (45%), Gaps = 17/167 (10%)
Query: 514 LVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQSNFKLPADAKVPIIMIGPG 573
L Y+ +G G+CST++ + P + P+ LP D + +IM+ G
Sbjct: 94 LEYKHPESGETVYGVCSTYLTHIEPGSEVKIT--GPV---GKEMLLPDDPEANVIMLATG 148
Query: 574 TGLAPFRGFLQERFALQEAGAE-----LGPSLLFFGCRNRKMDYIYEDELNNFVQSGALS 628
TG+AP R +L F E A G S L FG + +Y++EL Q +
Sbjct: 149 TGIAPMRTYLWRMFKDAERAANPEYQFKGFSWLVFGVPTTP-NILYKEELEEIQQKYPDN 207
Query: 629 -QLIVAFSREGPTKE----YVQHKMMEKSSDIWNML-SEGAYLYVCG 669
+L A SRE + Y+Q ++ E + +W ++ ++ + Y+CG
Sbjct: 208 FRLTYAISREQKNPQGGRMYIQDRVAEHADQLWQLIKNQKTHTYICG 254
>pdb|1E63|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Lys 75 Replaced By
Ser (K75s)
Length = 304
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 76/167 (45%), Gaps = 17/167 (10%)
Query: 514 LVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQSNFKLPADAKVPIIMIGPG 573
L Y+ +G G+CST++ + P + P+ LP D + +IM+ G
Sbjct: 103 LEYKHPESGETVYGVCSTYLTHIEPGSEVKIT--GPV---GKEMLLPDDPEANVIMLATG 157
Query: 574 TGLAPFRGFLQERFALQEAGAE-----LGPSLLFFGCRNRKMDYIYEDELNNFVQSGALS 628
TG+AP R +L F E A G S L FG + +Y++EL Q +
Sbjct: 158 TGIAPMRTYLWRMFKDAERAANPEYQFKGFSWLVFGVPTTP-NILYKEELEEIQQKYPDN 216
Query: 629 -QLIVAFSREGPTKE----YVQHKMMEKSSDIWNML-SEGAYLYVCG 669
+L A SRE + Y+Q ++ E + +W ++ ++ + Y+CG
Sbjct: 217 FRLTYAISREQKNPQGGRMYIQDRVAEHADQLWQLIKNQKTHTYICG 263
>pdb|1B2R|A Chain A, Ferredoxin-Nadp+ Reductase (Mutation: E 301 A)
Length = 304
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 76/167 (45%), Gaps = 17/167 (10%)
Query: 514 LVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQSNFKLPADAKVPIIMIGPG 573
L Y+ +G G+CST++ + P + P+ LP D + +IM+ G
Sbjct: 103 LEYKHPESGETVYGVCSTYLTHIEPGSEVKIT--GPV---GKEMLLPDDPEANVIMLATG 157
Query: 574 TGLAPFRGFLQERFALQEAGAE-----LGPSLLFFGCRNRKMDYIYEDELNNFVQSGALS 628
TG+AP R +L F E A G S L FG + +Y++EL Q +
Sbjct: 158 TGIAPMRTYLWRMFKDAERAANPEYQFKGFSWLVFGVPTTP-NILYKEELEEIQQKYPDN 216
Query: 629 -QLIVAFSREGPTKE----YVQHKMMEKSSDIWNML-SEGAYLYVCG 669
+L A SRE + Y+Q ++ E + +W ++ ++ + Y+CG
Sbjct: 217 FRLTYAISREQKNPQGGRMYIQDRVAEHADQLWQLIKNQKTHTYICG 263
>pdb|1BJK|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Arg 264 Replaced By
Glu (r264e)
Length = 295
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 86/192 (44%), Gaps = 21/192 (10%)
Query: 493 RYYSISSSPR---VAPSRIHVTC-ALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWA 548
R YSI+S+ V I + L Y+ +G G+CST++ + P +
Sbjct: 69 RLYSIASTRHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEVKIT--G 126
Query: 549 PIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAE-----LGPSLLFF 603
P+ LP D + +IM+ GTG+AP R +L F E A G S L F
Sbjct: 127 PV---GKEMLLPDDPEANVIMLATGTGIAPMRTYLWRMFKDAERAANPEYQFKGFSWLVF 183
Query: 604 GCRNRKMDYIYEDELNNFVQSGALS-QLIVAFSREGPTKE----YVQHKMMEKSSDIWNM 658
G + +Y++EL Q + +L A SRE + Y+Q ++ E + +W +
Sbjct: 184 GVPTTP-NILYKEELEEIQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHADQLWQL 242
Query: 659 L-SEGAYLYVCG 669
+ ++ + Y+CG
Sbjct: 243 IKNQKTHTYICG 254
>pdb|1QGY|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Lys 75 Replaced By
Glu (K75e)
Length = 295
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 86/192 (44%), Gaps = 21/192 (10%)
Query: 493 RYYSISSSPR---VAPSRIHVTC-ALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWA 548
R YSI+S+ V I + L Y+ +G G+CST++ + P +
Sbjct: 69 RLYSIASTRHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEVKIT--G 126
Query: 549 PIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAE-----LGPSLLFF 603
P+ LP D + +IM+ GTG+AP R +L F E A G S L F
Sbjct: 127 PV---GKEMLLPDDPEANVIMLATGTGIAPMRTYLWRMFKDAERAANPEYQFKGFSWLVF 183
Query: 604 GCRNRKMDYIYEDELNNFVQSGALS-QLIVAFSREGPTKE----YVQHKMMEKSSDIWNM 658
G + +Y++EL Q + +L A SRE + Y+Q ++ E + +W +
Sbjct: 184 GVPTTP-NILYKEELEEIQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHADQLWQL 242
Query: 659 L-SEGAYLYVCG 669
+ ++ + Y+CG
Sbjct: 243 IKNQKTHTYICG 254
>pdb|2BSA|A Chain A, Ferredoxin-Nadp Reductase (Mutation: Y 303 S) Complexed
With Nadp
Length = 303
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 76/167 (45%), Gaps = 17/167 (10%)
Query: 514 LVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQSNFKLPADAKVPIIMIGPG 573
L Y+ +G G+CST++ + P + P+ LP D + +IM+ G
Sbjct: 102 LEYKHPESGATVYGVCSTYLTHIEPGSEVKIT--GPV---GKEMLLPDDPEANVIMLATG 156
Query: 574 TGLAPFRGFLQERFALQEAGAE-----LGPSLLFFGCRNRKMDYIYEDELNNFVQSGALS 628
TG+AP R +L F E A G S L FG + +Y++EL Q +
Sbjct: 157 TGIAPMRTYLWRMFKDAERAANPEYQFKGFSWLVFGVPTTP-NILYKEELEEIQQKYPDN 215
Query: 629 -QLIVAFSREGPTKE----YVQHKMMEKSSDIWNML-SEGAYLYVCG 669
+L A SRE + Y+Q ++ E + +W ++ ++ + Y+CG
Sbjct: 216 FRLTYAISREQKNPQGGRMYIQDRVAEHADQLWQLIKNQKTHTYICG 262
>pdb|1H85|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Val 136 Replaced By
Leu (V136l)
Length = 295
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 86/192 (44%), Gaps = 21/192 (10%)
Query: 493 RYYSISSSPR---VAPSRIHVTC-ALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWA 548
R YSI+S+ V I + L Y+ +G G+CST++ + P +
Sbjct: 69 RLYSIASTRHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEVKIT--G 126
Query: 549 PIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAE-----LGPSLLFF 603
P+ LP D + +IM+ GTG+AP R +L F E A G S L F
Sbjct: 127 PL---GKEMLLPDDPEANVIMLATGTGIAPMRTYLWRMFKDAERAANPEYQFKGFSWLVF 183
Query: 604 GCRNRKMDYIYEDELNNFVQSGALS-QLIVAFSREGPTKE----YVQHKMMEKSSDIWNM 658
G + +Y++EL Q + +L A SRE + Y+Q ++ E + +W +
Sbjct: 184 GVPTTP-NILYKEELEEIQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHADQLWQL 242
Query: 659 L-SEGAYLYVCG 669
+ ++ + Y+CG
Sbjct: 243 IKNQKTHTYICG 254
>pdb|1BQE|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Thr 155 Replaced By
Gly (T155g)
Length = 295
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 86/192 (44%), Gaps = 21/192 (10%)
Query: 493 RYYSISSSPR---VAPSRIHVTC-ALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWA 548
R YSI+S+ V I + L Y+ +G G+CST++ + P +
Sbjct: 69 RLYSIASTRHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEVKIT--G 126
Query: 549 PIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAE-----LGPSLLFF 603
P+ LP D + +IM+ GTG+AP R +L F E A G S L F
Sbjct: 127 PV---GKEMLLPDDPEANVIMLAGGTGIAPMRTYLWRMFKDAERAANPEYQFKGFSWLVF 183
Query: 604 GCRNRKMDYIYEDELNNFVQSGALS-QLIVAFSREGPTKE----YVQHKMMEKSSDIWNM 658
G + +Y++EL Q + +L A SRE + Y+Q ++ E + +W +
Sbjct: 184 GVPTTP-NILYKEELEEIQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHADQLWQL 242
Query: 659 L-SEGAYLYVCG 669
+ ++ + Y+CG
Sbjct: 243 IKNQKTHTYICG 254
>pdb|2XNC|A Chain A, Crystal Structure Of An Engineered Ferredoxin Nadp
Reductase (Fnr) From Pisum Sativum
pdb|2XNC|B Chain B, Crystal Structure Of An Engineered Ferredoxin Nadp
Reductase (Fnr) From Pisum Sativum
Length = 315
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 91/204 (44%), Gaps = 18/204 (8%)
Query: 493 RYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFV 552
R YSI+SS + T +L ++ P G +CS ++ + P + P+
Sbjct: 102 RLYSIASSA-IGDFGDSKTVSLCVKRVPDG-----VCSNFLCDLKPGSEVKIT--GPV-- 151
Query: 553 RQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAEL-GPSLLFFGCRNRKMD 611
+P D +IM+G GTG+APFR FL + F + + G + LF G
Sbjct: 152 -GKEMLMPKDPNATVIMLGTGTGIAPFRSFLWKMFFEKHEDYQFNGLAWLFLGVPTSSSL 210
Query: 612 YIYEDELNNFVQSGALSQLIVAFSREGPT----KEYVQHKMMEKSSDIWNML-SEGAYLY 666
E+ ++ +L A SRE K Y+Q +M + + ++W +L + ++Y
Sbjct: 211 LYKEEFEKMKEKAPENFRLDFAVSREQVNDKGEKMYIQTRMAQYAEELWELLKKDNTFVY 270
Query: 667 VCGDAKSMARDVHRTLHTIVQEQG 690
+CG K M + + + ++ + G
Sbjct: 271 MCG-LKGMEKGIDDIMVSLAAKDG 293
>pdb|2VYQ|A Chain A, Ferredoxin:nadp Reductase Mutant With Thr 155 Replaced By
Gly, Ala 160 Replaced By Thr, Leu 263 Replaced By Pro
And Tyr 303 Replaced By Ser (T155g-A160t-L263p-Y303s)
pdb|2VZL|A Chain A, Ferredoxin-Nadp Reductase (Mutations: T155g, A160t, L263p
And Y303s) Complexed With Nad By Cocrystallization
Length = 304
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 76/167 (45%), Gaps = 17/167 (10%)
Query: 514 LVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQSNFKLPADAKVPIIMIGPG 573
L Y+ +G G+CST++ + P + P+ LP D + +IM+ G
Sbjct: 103 LEYKHPESGETVYGVCSTYLTHIEPGSEVKIT--GPV---GKEMLLPDDPEANVIMLAGG 157
Query: 574 TGLAPFRGFLQERFALQEAGAE-----LGPSLLFFGCRNRKMDYIYEDELNNFVQSGALS 628
TG+ P R +L F E A G S L FG + +Y++EL Q +
Sbjct: 158 TGITPMRTYLWRMFKDAERAANPEYQFKGFSWLVFGVPTTP-NILYKEELEEIQQKYPDN 216
Query: 629 -QLIVAFSREGPTKE----YVQHKMMEKSSDIWNML-SEGAYLYVCG 669
+L A SRE + Y+Q ++ E + ++W ++ ++ + Y+CG
Sbjct: 217 FRLTYAISREQKNPQGGRMYIQDRVAEHADELWQLIKNQKTHTYICG 263
>pdb|1OGI|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Thr 155 Replaced By
Gly And Ala 160 Replaced By Thr (T155g-A160t)
Length = 303
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 85/192 (44%), Gaps = 21/192 (10%)
Query: 493 RYYSISSSPR---VAPSRIHVTC-ALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWA 548
R YSI+S+ V I + L Y+ +G G+CST++ + P +
Sbjct: 77 RLYSIASTRHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEVKIT--G 134
Query: 549 PIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAE-----LGPSLLFF 603
P+ LP D + +IM+ GTG+ P R +L F E A G S L F
Sbjct: 135 PV---GKEMLLPDDPEANVIMLAGGTGITPMRTYLWRMFKDAERAANPEYQFKGFSWLVF 191
Query: 604 GCRNRKMDYIYEDELNNFVQSGALS-QLIVAFSREGPTKE----YVQHKMMEKSSDIWNM 658
G + +Y++EL Q + +L A SRE + Y+Q ++ E + +W +
Sbjct: 192 GVPTTP-NILYKEELEEIQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHADQLWQL 250
Query: 659 L-SEGAYLYVCG 669
+ ++ + Y+CG
Sbjct: 251 IKNQKTHTYICG 262
>pdb|1H42|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Thr 155 Replaced By
Gly, Ala 160 Replaced By Thr And Leu 263 Replaced By Pro
(T155g-A160t-L263p)
Length = 304
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 75/167 (44%), Gaps = 17/167 (10%)
Query: 514 LVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQSNFKLPADAKVPIIMIGPG 573
L Y+ +G G+CST++ + P + P+ LP D + +IM+ G
Sbjct: 103 LEYKHPESGETVYGVCSTYLTHIEPGSEVKIT--GPV---GKEMLLPDDPEANVIMLAGG 157
Query: 574 TGLAPFRGFLQERFALQEAGAE-----LGPSLLFFGCRNRKMDYIYEDELNNFVQSGALS 628
TG+ P R +L F E A G S L FG + +Y++EL Q +
Sbjct: 158 TGITPMRTYLWRMFKDAERAANPEYQFKGFSWLVFGVPTTP-NILYKEELEEIQQKYPDN 216
Query: 629 -QLIVAFSREGPTKE----YVQHKMMEKSSDIWNML-SEGAYLYVCG 669
+L A SRE + Y+Q ++ E + +W ++ ++ + Y+CG
Sbjct: 217 FRLTYAISREQKNPQGGRMYIQDRVAEHADQLWQLIKNQKTHTYICG 263
>pdb|2BMW|A Chain A, Ferredoxin: Nadp+reductase Mutant With Thr 155 Replaced By
Gly, Ala 160 Replaced By Thr, Leu 263 Replaced By Pro,
Arg 264 Replaced By Pro And Gly 265 Replaced By Pro
(T155g- A160t-L263p-R264p-G265p)
Length = 304
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 75/167 (44%), Gaps = 17/167 (10%)
Query: 514 LVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQSNFKLPADAKVPIIMIGPG 573
L Y+ +G G+CST++ + P + P+ LP D + +IM+ G
Sbjct: 103 LEYKHPESGETVYGVCSTYLTHIEPGSEVKIT--GPV---GKEMLLPDDPEANVIMLAGG 157
Query: 574 TGLAPFRGFLQERFALQEAGAE-----LGPSLLFFGCRNRKMDYIYEDELNNFVQSGALS 628
TG+ P R +L F E A G S L FG + +Y++EL Q +
Sbjct: 158 TGITPMRTYLWRMFKDAERAANPEYQFKGFSWLVFGVPTTP-NILYKEELEEIQQKYPDN 216
Query: 629 -QLIVAFSREGPTKE----YVQHKMMEKSSDIWNML-SEGAYLYVCG 669
+L A SRE + Y+Q ++ E + +W ++ ++ + Y+CG
Sbjct: 217 FRLTYAISREQKNPQGGRMYIQDRVAEHADQLWQLIKNQKTHTYICG 263
>pdb|2RC5|A Chain A, Refined Structure Of Fnr From Leptospira Interrogans
pdb|2RC5|B Chain B, Refined Structure Of Fnr From Leptospira Interrogans
pdb|2RC5|C Chain C, Refined Structure Of Fnr From Leptospira Interrogans
pdb|2RC5|D Chain D, Refined Structure Of Fnr From Leptospira Interrogans
pdb|2RC6|A Chain A, Refined Structure Of Fnr From Leptospira Interrogans Bound
To Nadp+
pdb|2RC6|B Chain B, Refined Structure Of Fnr From Leptospira Interrogans Bound
To Nadp+
pdb|2RC6|C Chain C, Refined Structure Of Fnr From Leptospira Interrogans Bound
To Nadp+
pdb|2RC6|D Chain D, Refined Structure Of Fnr From Leptospira Interrogans Bound
To Nadp+
Length = 314
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 77/183 (42%), Gaps = 25/183 (13%)
Query: 526 KGLCSTWMKNSLPMEKSNDCSWAPIFVRQSNFKLP-ADAKVPIIMIGPGTGLAPFRGFLQ 584
KG+CS +M + P ++ + F LP D I+ + GTG+APF G +
Sbjct: 131 KGVCSNYMCDLKPGDEVTMTGPS-----GKKFLLPNTDFSGDIMFLATGTGIAPFIG-MS 184
Query: 585 ERFALQEAGAELGPSLLFFGCRNRK----MDYI--YEDELNNFVQSGALSQLIVAFSREG 638
E + G L +G MDY+ E + NF +LI A SRE
Sbjct: 185 EELLEHKLIKFTGNITLVYGAPYSDELVMMDYLKGLESKHKNF-------KLITAISREE 237
Query: 639 PT-----KEYVQHKMMEKSSDIWNMLSEGAYLYVCGDAKSMARDVHRTLHTIVQEQGSLD 693
+ Y+ H++ E++ + +L+ G Y+CG K M + V + I G+ +
Sbjct: 238 KNSFDGGRMYISHRVREQAEAVKKILNGGGRFYICGGPKGMEKGVIEEIQKISGNTGTYE 297
Query: 694 SSK 696
K
Sbjct: 298 EFK 300
>pdb|1YKG|A Chain A, Solution Structure Of The Flavodoxin-Like Domain From The
Escherichia Coli Sulfite Reductase
Length = 167
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 59/128 (46%), Gaps = 10/128 (7%)
Query: 107 VTIFFGTQTGTAEGFAKALADEARARYDKAIFKVVXXXXXXXXXXXXXXKLKKENIVFFF 166
+TI +QTG A A+AL D+ A K K+V ++ E ++
Sbjct: 12 ITIISASQTGNARRVAEALRDDLLAA--KLNVKLVNAGDYKFK------QIASEKLLIVV 63
Query: 167 LATYGDGEPTDNAARFYKWFTEQKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILA 226
+T G+GEP + A +K+ +K L+ + VF LG+ YE F + K D LA
Sbjct: 64 TSTQGEGEPPEEAVALHKFLFSKK--APKLENTAFAVFSLGDTSYEFFCQSGKDFDSKLA 121
Query: 227 NQGAKRLV 234
G +RL+
Sbjct: 122 ELGGERLL 129
>pdb|3JQQ|A Chain A, Crystal Structure Of The H286k Mutant Of Ferredoxin-Nadp+
Reductase From Plasmodium Falciparum In Complex With
2'p- Amp
pdb|3JQQ|B Chain B, Crystal Structure Of The H286k Mutant Of Ferredoxin-Nadp+
Reductase From Plasmodium Falciparum In Complex With
2'p- Amp
pdb|3JQQ|C Chain C, Crystal Structure Of The H286k Mutant Of Ferredoxin-Nadp+
Reductase From Plasmodium Falciparum In Complex With
2'p- Amp
pdb|3JQQ|D Chain D, Crystal Structure Of The H286k Mutant Of Ferredoxin-Nadp+
Reductase From Plasmodium Falciparum In Complex With
2'p- Amp
pdb|3JQQ|E Chain E, Crystal Structure Of The H286k Mutant Of Ferredoxin-Nadp+
Reductase From Plasmodium Falciparum In Complex With
2'p- Amp
pdb|3JQQ|F Chain F, Crystal Structure Of The H286k Mutant Of Ferredoxin-Nadp+
Reductase From Plasmodium Falciparum In Complex With
2'p- Amp
Length = 316
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 97/226 (42%), Gaps = 33/226 (14%)
Query: 493 RYYSISSSPRVAPSRIHVTCALVYEKTPT--GRVHKGLCSTWMKNSLPMEKSNDCSWAPI 550
R YSISSS + + + YE+T + G CS ++KN K ND I
Sbjct: 101 RLYSISSSNNMENLSVAIKIH-KYEQTENAPNITNYGYCSGFIKNL----KIND----DI 151
Query: 551 FVRQSN--FKLPADA---KVPIIMIGPGTGLAPFRGFLQERFALQEAG------AELGPS 599
++ ++ F LP DA I I GTG++P+ FL++ FA + G
Sbjct: 152 YLTGAHGYFNLPNDAIQKNTNFIFIATGTGISPYISFLKKLFAYDKNNLYNRNSNYTGYI 211
Query: 600 LLFFGCRNRKMDYIYEDELNNFVQ---SGALSQLIVAFSREG-PTKEYVQHKMMEKSSDI 655
+++G N +Y +EL F + + + ++ + T YVQ ++ ++ ++
Sbjct: 212 TIYYGVYNED-SILYLNELEYFQKMYPNNINIHYVFSYKQNSDATSFYVQDEIYKRKTEF 270
Query: 656 WNMLSE-GAYLYVCGDAKSMARDVHRTLHTIVQEQGSLDSSKAESM 700
N+ + LY+CG + + + I++ D K + +
Sbjct: 271 LNLFNNYKCELYICG-----KKSIRYKVMDILKSHDQFDEKKKKRV 311
>pdb|3JQP|A Chain A, Crystal Structure Of The H286l Mutant Of Ferredoxin-Nadp+
Reductase From Plasmodium Falciparum With 2'p-Amp
pdb|3JQP|B Chain B, Crystal Structure Of The H286l Mutant Of Ferredoxin-Nadp+
Reductase From Plasmodium Falciparum With 2'p-Amp
pdb|3JQP|C Chain C, Crystal Structure Of The H286l Mutant Of Ferredoxin-Nadp+
Reductase From Plasmodium Falciparum With 2'p-Amp
pdb|3JQP|D Chain D, Crystal Structure Of The H286l Mutant Of Ferredoxin-Nadp+
Reductase From Plasmodium Falciparum With 2'p-Amp
pdb|3JQP|E Chain E, Crystal Structure Of The H286l Mutant Of Ferredoxin-Nadp+
Reductase From Plasmodium Falciparum With 2'p-Amp
pdb|3JQP|F Chain F, Crystal Structure Of The H286l Mutant Of Ferredoxin-Nadp+
Reductase From Plasmodium Falciparum With 2'p-Amp
pdb|3JQR|A Chain A, Crystal Structure Of The H286l Mutant Of Ferredoxin-Nadp+
Reductase From Plasmodium Falciparum
Length = 316
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 97/226 (42%), Gaps = 33/226 (14%)
Query: 493 RYYSISSSPRVAPSRIHVTCALVYEKTPT--GRVHKGLCSTWMKNSLPMEKSNDCSWAPI 550
R YSISSS + + + YE+T + G CS ++KN K ND I
Sbjct: 101 RLYSISSSNNMENLSVAIKIH-KYEQTENAPNITNYGYCSGFIKNL----KIND----DI 151
Query: 551 FVRQSN--FKLPADA---KVPIIMIGPGTGLAPFRGFLQERFALQEAG------AELGPS 599
++ ++ F LP DA I I GTG++P+ FL++ FA + G
Sbjct: 152 YLTGAHGYFNLPNDAIQKNTNFIFIATGTGISPYISFLKKLFAYDKNNLYNRNSNYTGYI 211
Query: 600 LLFFGCRNRKMDYIYEDELNNFVQ---SGALSQLIVAFSREG-PTKEYVQHKMMEKSSDI 655
+++G N +Y +EL F + + + ++ + T YVQ ++ ++ ++
Sbjct: 212 TIYYGVYNED-SILYLNELEYFQKMYPNNINIHYVFSYKQNSDATSFYVQDEIYKRKTEF 270
Query: 656 WNMLSE-GAYLYVCGDAKSMARDVHRTLHTIVQEQGSLDSSKAESM 700
N+ + LY+CG + + + I++ D K + +
Sbjct: 271 LNLFNNYKCELYICG-----LKSIRYKVMDILKSHDQFDEKKKKRV 311
>pdb|2OK7|A Chain A, Ferredoxin-Nadp+ Reductase From Plasmodium Falciparum With
2'p-Amp
pdb|2OK7|B Chain B, Ferredoxin-Nadp+ Reductase From Plasmodium Falciparum With
2'p-Amp
pdb|2OK7|C Chain C, Ferredoxin-Nadp+ Reductase From Plasmodium Falciparum With
2'p-Amp
pdb|2OK7|D Chain D, Ferredoxin-Nadp+ Reductase From Plasmodium Falciparum With
2'p-Amp
pdb|2OK7|E Chain E, Ferredoxin-Nadp+ Reductase From Plasmodium Falciparum With
2'p-Amp
pdb|2OK7|F Chain F, Ferredoxin-Nadp+ Reductase From Plasmodium Falciparum With
2'p-Amp
pdb|2OK8|A Chain A, Ferredoxin-nadp+ Reductase From Plasmodium Falciparum
pdb|2OK8|B Chain B, Ferredoxin-nadp+ Reductase From Plasmodium Falciparum
pdb|2OK8|C Chain C, Ferredoxin-nadp+ Reductase From Plasmodium Falciparum
pdb|2OK8|D Chain D, Ferredoxin-nadp+ Reductase From Plasmodium Falciparum
Length = 316
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 97/226 (42%), Gaps = 33/226 (14%)
Query: 493 RYYSISSSPRVAPSRIHVTCALVYEKTPT--GRVHKGLCSTWMKNSLPMEKSNDCSWAPI 550
R YSISSS + + + YE+T + G CS ++KN K ND I
Sbjct: 101 RLYSISSSNNMENLSVAIKIH-KYEQTENAPNITNYGYCSGFIKNL----KIND----DI 151
Query: 551 FVRQSN--FKLPADA---KVPIIMIGPGTGLAPFRGFLQERFALQEAG------AELGPS 599
++ ++ F LP DA I I GTG++P+ FL++ FA + G
Sbjct: 152 YLTGAHGYFNLPNDAIQKNTNFIFIATGTGISPYISFLKKLFAYDKNNLYNRNSNYTGYI 211
Query: 600 LLFFGCRNRKMDYIYEDELNNFVQ---SGALSQLIVAFSREG-PTKEYVQHKMMEKSSDI 655
+++G N +Y +EL F + + + ++ + T YVQ ++ ++ ++
Sbjct: 212 TIYYGVYNED-SILYLNELEYFQKMYPNNINIHYVFSYKQNSDATSFYVQDEIYKRKTEF 270
Query: 656 WNMLSE-GAYLYVCGDAKSMARDVHRTLHTIVQEQGSLDSSKAESM 700
N+ + LY+CG + + + I++ D K + +
Sbjct: 271 LNLFNNYKCELYICG-----HKSIRYKVMDILKSHDQFDEKKKKRV 311
>pdb|2HNA|A Chain A, Solution Structure Of A Bacterial Apo-Flavodoxin
pdb|2HNB|A Chain A, Solution Structure Of A Bacterial Holo-Flavodoxin
Length = 147
Score = 42.7 bits (99), Expect = 7e-04, Method: Composition-based stats.
Identities = 34/126 (26%), Positives = 57/126 (45%), Gaps = 13/126 (10%)
Query: 107 VTIFFGTQTGTAEGFAKALADEARARYDKAIFKVVXXXXXXXXXXXXXXKLKKENIVFFF 166
+T+ G+ G AE A+ LA+ + ++A F L I
Sbjct: 4 ITLISGSTLGGAEYVAEHLAE----KLEEAGFTT------ETLHGPLLEDLPASGIWLVI 53
Query: 167 LATYGDGEPTDNAARFYKWFTEQKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEILA 226
+T+G G+ DN + FY+ EQK L +++G G+G+R+Y+ F ++ L
Sbjct: 54 SSTHGAGDIPDNLSPFYEALQEQKPD---LSAVRFGAIGIGSREYDTFCGAIDKLEAELK 110
Query: 227 NQGAKR 232
N GAK+
Sbjct: 111 NSGAKQ 116
>pdb|1J8Q|A Chain A, Low Temperature (100k) Crystal Structure Of Flavodoxin D.
Vulgaris Wild-Type At 1.35 Angstrom Resolution
pdb|2FX2|A Chain A, Comparison Of The Crystal Structures Of A Flavodoxin In
Its Three Oxidation States At Cryogenic Temperatures
pdb|3FX2|A Chain A, Comparison Of The Crystal Structures Of A Flavodoxin In
Its Three Oxidation States At Cryogenic Temperatures
pdb|4FX2|A Chain A, Comparison Of The Crystal Structures Of A Flavodoxin In
Its Three Oxidation States At Cryogenic Temperatures
pdb|5FX2|A Chain A, Comparison Of The Crystal Structures Of A Flavodoxin In
Its Three Oxidation States At Cryogenic Temperatures
Length = 147
Score = 35.8 bits (81), Expect = 0.087, Method: Composition-based stats.
Identities = 40/150 (26%), Positives = 60/150 (40%), Gaps = 15/150 (10%)
Query: 106 KVTIFFGTQTGTAEGFAKALADE-ARARYDKAIFKVVXXXXXXXXXXXXXXKLKKENIVF 164
K I +G+ TG E A+ +A E A A Y+ + ++V
Sbjct: 2 KALIVYGSTTGNTEYTAETIARELADAGYE--------VDSRDAASVEAGGLFEGFDLVL 53
Query: 165 FFLATYGDGEPTDNAARFYKWFTEQKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEI 224
+T+GD + + F F +E G Q K FG G+ YE+F ++E
Sbjct: 54 LGCSTWGD-DSIELQDDFIPLFDSLEETGA--QGRKVACFGCGDSSYEYFCGAVDAIEEK 110
Query: 225 LANQGAKRLVPVGL--GDDDQCIEDDFSAW 252
L N GA+ +V GL D + DD W
Sbjct: 111 LKNLGAE-IVQDGLRIDGDPRAARDDIVGW 139
>pdb|3OZU|A Chain A, The Crystal Structure Of Flavohemoglobin From R. Eutrophus
In Complex With Miconazole
pdb|3OZV|B Chain B, The Crystal Structure Of Flavohemoglobin From R. Eutrophus
In Complex With Econazole
pdb|3OZV|A Chain A, The Crystal Structure Of Flavohemoglobin From R. Eutrophus
In Complex With Econazole
pdb|3OZW|A Chain A, The Crystal Structure Of Flavohemoglobin From R. Eutrophus
In Complex With Ketoconazole
pdb|3OZW|B Chain B, The Crystal Structure Of Flavohemoglobin From R. Eutrophus
In Complex With Ketoconazole
Length = 403
Score = 35.8 bits (81), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 96/249 (38%), Gaps = 44/249 (17%)
Query: 443 RHLASPAGKDEYAQWIVASQRSLLEVMSEF---PSAKPPLGVF-------FAAIVPRL-- 490
R P G + +++ +R +V++ F P+ P+ F A VP L
Sbjct: 143 RSAEQPGGWKGWRTFVIREKRPESDVITSFILEPADGGPVVNFEPGQYTSVAIDVPALGL 202
Query: 491 -QPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAP 549
Q R YS+S P RI V ++ G G S + + + N
Sbjct: 203 QQIRQYSLSDMPNGRSYRISV------KREGGGPQPPGYVSNLLHDHV-----NVGDQVK 251
Query: 550 IFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAELGPSLLFFGCRNRK 609
+ +F + DAK PI++I G GL P L + ALQ ++ + G RN
Sbjct: 252 LAAPYGSFHIDVDAKTPIVLISGGVGLTPMVSML--KVALQAPPRQV---VFVHGARNSA 306
Query: 610 MDYIYEDELNNFVQSGALSQLIVAFSREGPT----KEY-----VQHKMMEKSSDIWNMLS 660
+ + D L ++ L V + + P ++Y V K +EKS +L
Sbjct: 307 V-HAMRDRLREAAKTYENLDLFVFYDQPLPEDVQGRDYDYPGLVDVKQIEKS-----ILL 360
Query: 661 EGAYLYVCG 669
A Y+CG
Sbjct: 361 PDADYYICG 369
>pdb|1KRH|A Chain A, X-Ray Stucture Of Benzoate Dioxygenase Reductase
pdb|1KRH|B Chain B, X-Ray Stucture Of Benzoate Dioxygenase Reductase
Length = 338
Score = 35.4 bits (80), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 5/62 (8%)
Query: 562 DAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAELGPSLLFFGCRNRKMDYIYEDELNNF 621
D K P++M+ GTG+APF LQ L++ G+E P L FG + D + ++L+
Sbjct: 208 DVKRPVLMLAGGTGIAPFLSMLQ---VLEQKGSE-HPVRLVFGV-TQDCDLVALEQLDAL 262
Query: 622 VQ 623
Q
Sbjct: 263 QQ 264
>pdb|1BU5|A Chain A, X-Ray Crystal Structure Of The Desulfovibrio Vulgaris
(Hildenborough) Apoflavodoxin-Riboflavin Complex
pdb|1BU5|B Chain B, X-Ray Crystal Structure Of The Desulfovibrio Vulgaris
(Hildenborough) Apoflavodoxin-Riboflavin Complex
Length = 147
Score = 35.4 bits (80), Expect = 0.099, Method: Composition-based stats.
Identities = 40/150 (26%), Positives = 60/150 (40%), Gaps = 15/150 (10%)
Query: 106 KVTIFFGTQTGTAEGFAKALADE-ARARYDKAIFKVVXXXXXXXXXXXXXXKLKKENIVF 164
K I +G+ TG E A+ +A E A A Y+ + ++V
Sbjct: 2 KALIVYGSTTGNTEYTAETIARELADAGYE--------VDSRDAASVEAGGLFEGFDLVL 53
Query: 165 FFLATYGDGEPTDNAARFYKWFTEQKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEI 224
+T+GD + + F F +E G Q K FG G+ YE+F ++E
Sbjct: 54 LGCSTWGD-DSIELQDDFIPLFDSLEETGA--QGRKVACFGCGDSSYEYFCGAVDAIEEK 110
Query: 225 LANQGAKRLVPVGL--GDDDQCIEDDFSAW 252
L N GA+ +V GL D + DD W
Sbjct: 111 LKNLGAE-IVQDGLRIDGDPRAARDDIVGW 139
>pdb|1CQX|A Chain A, Crystal Structure Of The Flavohemoglobin From Alcaligenes
Eutrophus At 1.75 A Resolution
pdb|1CQX|B Chain B, Crystal Structure Of The Flavohemoglobin From Alcaligenes
Eutrophus At 1.75 A Resolution
Length = 403
Score = 35.4 bits (80), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 96/249 (38%), Gaps = 44/249 (17%)
Query: 443 RHLASPAGKDEYAQWIVASQRSLLEVMSEF---PSAKPPLGVF-------FAAIVPRL-- 490
R P G + +++ +R +V++ F P+ P+ F A VP L
Sbjct: 143 RSAEQPGGWKGWRTFVIREKRPESDVITSFILEPADGGPVVNFEPGQYTSVAIDVPALGL 202
Query: 491 -QPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAP 549
Q R YS+S P RI V ++ G G S + + + N
Sbjct: 203 QQIRQYSLSDMPNGRTYRISV------KREGGGPQPPGYVSNLLHDHV-----NVGDQVK 251
Query: 550 IFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALQEAGAELGPSLLFFGCRNRK 609
+ +F + DAK PI++I G GL P L + ALQ ++ + G RN
Sbjct: 252 LAAPYGSFHIDVDAKTPIVLISGGVGLTPMVSML--KVALQAPPRQV---VFVHGARNSA 306
Query: 610 MDYIYEDELNNFVQSGALSQLIVAFSREGPT----KEY-----VQHKMMEKSSDIWNMLS 660
+ + D L ++ L V + + P ++Y V K +EKS +L
Sbjct: 307 V-HAMRDRLREAAKTYENLDLFVFYDQPLPEDVQGRDYDYPGLVDVKQIEKS-----ILL 360
Query: 661 EGAYLYVCG 669
A Y+CG
Sbjct: 361 PDADYYICG 369
>pdb|1WSB|A Chain A, Flavodoxin Mutant- S64c
pdb|1WSW|A Chain A, Low Temperature (100k) Crystal Structure Of Flavodoxin
Mutant S64c, Dimer, Semiquinone State
pdb|1XYV|A Chain A, Low Temperature (100k) Crystal Structure Of Flavodoxin
Mutant S64c, Monomer, Semiquinone State
pdb|1XYY|A Chain A, Low Temperature (100k) Crystal Structure Of Flavodoxin
Mutant S64c, Homodimer, Oxidised State
Length = 148
Score = 35.4 bits (80), Expect = 0.10, Method: Composition-based stats.
Identities = 42/152 (27%), Positives = 61/152 (40%), Gaps = 19/152 (12%)
Query: 106 KVTIFFGTQTGTAEGFAKALADE-ARARYDKAIFKVVXXXXXXXXXXXXXXKLKKENIVF 164
K I +G+ TG E A+ +A E A A Y+ + ++V
Sbjct: 3 KALIVYGSTTGNTEYTAETIARELADAGYE--------VDSRDAASVEAGGLFEGFDLVL 54
Query: 165 FFLATYGDG--EPTDNAARFYKWFTEQKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVD 222
+T+GD E D+ F F +E G Q K FG G+ YE+F ++
Sbjct: 55 LGCSTWGDDCIELQDD---FIPLFDSLEETGA--QGRKVACFGCGDSSYEYFCGAVDAIE 109
Query: 223 EILANQGAKRLVPVGL--GDDDQCIEDDFSAW 252
E L N GA+ +V GL D + DD W
Sbjct: 110 EKLKNLGAE-IVQDGLRIDGDPRAARDDIVGW 140
>pdb|1J9G|A Chain A, Low Temperature (100k) Crystal Structure Of Flavodoxin D.
Vulgaris S64c Mutant, Monomer Oxidised, At 2.4 Angstrom
Resolution
Length = 147
Score = 35.4 bits (80), Expect = 0.11, Method: Composition-based stats.
Identities = 42/152 (27%), Positives = 61/152 (40%), Gaps = 19/152 (12%)
Query: 106 KVTIFFGTQTGTAEGFAKALADE-ARARYDKAIFKVVXXXXXXXXXXXXXXKLKKENIVF 164
K I +G+ TG E A+ +A E A A Y+ + ++V
Sbjct: 2 KALIVYGSTTGNTEYTAETIARELADAGYE--------VDSRDAASVEAGGLFEGFDLVL 53
Query: 165 FFLATYGDG--EPTDNAARFYKWFTEQKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVD 222
+T+GD E D+ F F +E G Q K FG G+ YE+F ++
Sbjct: 54 LGCSTWGDDCIELQDD---FIPLFDSLEETGA--QGRKVACFGCGDSSYEYFCGAVDAIE 108
Query: 223 EILANQGAKRLVPVGL--GDDDQCIEDDFSAW 252
E L N GA+ +V GL D + DD W
Sbjct: 109 EKLKNLGAE-IVQDGLRIDGDPRAARDDIVGW 139
>pdb|1J9E|A Chain A, Low Temperature (100k) Crystal Structure Of Flavodoxin D.
Vulgaris S35c Mutant At 1.44 Angstrom Resolution
pdb|1XT6|A Chain A, S35c Flavodoxin Mutant In The Semiquinone State
Length = 147
Score = 35.0 bits (79), Expect = 0.13, Method: Composition-based stats.
Identities = 40/150 (26%), Positives = 60/150 (40%), Gaps = 15/150 (10%)
Query: 106 KVTIFFGTQTGTAEGFAKALADE-ARARYDKAIFKVVXXXXXXXXXXXXXXKLKKENIVF 164
K I +G+ TG E A+ +A E A A Y+ + ++V
Sbjct: 2 KALIVYGSTTGNTEYTAETIARELADAGYE--------VDCRDAASVEAGGLFEGFDLVL 53
Query: 165 FFLATYGDGEPTDNAARFYKWFTEQKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEI 224
+T+GD + + F F +E G Q K FG G+ YE+F ++E
Sbjct: 54 LGCSTWGD-DSIELQDDFIPLFDSLEETGA--QGRKVACFGCGDSSYEYFCGAVDAIEEK 110
Query: 225 LANQGAKRLVPVGL--GDDDQCIEDDFSAW 252
L N GA+ +V GL D + DD W
Sbjct: 111 LKNLGAE-IVQDGLRIDGDPRAARDDIVGW 139
>pdb|2FCR|A Chain A, Crystal Structure Of Oxidized Flavodoxin From A Red Alga
Chondrus Crispus Refined At 1.8 Angstroms Resolution:
Description Of The Flavin Mononucleotide Binding Site
Length = 173
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 55/140 (39%), Gaps = 14/140 (10%)
Query: 106 KVTIFFGTQTGTAEGFAKALADEARARYDKAIFKVVXXXXXXXXXXXXXXKLKKENIVFF 165
K+ IFF T TG A + A+ D I LK +++F
Sbjct: 1 KIGIFFSTSTGNTTEVADFIGKTLGAKADAPI---------DVDDVTDPQALKDYDLLFL 51
Query: 166 FLATYGDGEPTDNAARFYKWFTEQKEGGEWLQKLKYGVFGLGNRQY--EHFNKIAKVVDE 223
T+ G T+ + + F K ++ L +FGLG+ + ++F + + +
Sbjct: 52 GAPTWNTGADTERSGTSWDEFLYDKLPEVDMKDLPVAIFGLGDAEGYPDNFCDAIEEIHD 111
Query: 224 ILANQGAKRLVPVGLGDDDQ 243
A QGAK PVG + D
Sbjct: 112 CFAKQGAK---PVGFSNPDD 128
>pdb|1C7E|A Chain A, D95e Hydroquinone Flavodoxin Mutant From D. Vulgaris
pdb|1C7E|B Chain B, D95e Hydroquinone Flavodoxin Mutant From D. Vulgaris
pdb|1C7F|A Chain A, D95e Oxidized Flavodoxin Mutant From D. Vulgaris
pdb|1C7F|B Chain B, D95e Oxidized Flavodoxin Mutant From D. Vulgaris
Length = 147
Score = 35.0 bits (79), Expect = 0.15, Method: Composition-based stats.
Identities = 40/150 (26%), Positives = 59/150 (39%), Gaps = 15/150 (10%)
Query: 106 KVTIFFGTQTGTAEGFAKALADE-ARARYDKAIFKVVXXXXXXXXXXXXXXKLKKENIVF 164
K I +G+ TG E A+ +A E A A Y+ + ++V
Sbjct: 2 KALIVYGSTTGNTEYTAETIARELADAGYE--------VDSRDAASVEAGGLFEGFDLVL 53
Query: 165 FFLATYGDGEPTDNAARFYKWFTEQKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEI 224
+T+GD + + F F +E G Q K FG G YE+F ++E
Sbjct: 54 LGCSTWGD-DSIELQDDFIPLFDSLEETGA--QGRKVACFGCGESSYEYFCGAVDAIEEK 110
Query: 225 LANQGAKRLVPVGL--GDDDQCIEDDFSAW 252
L N GA+ +V GL D + DD W
Sbjct: 111 LKNLGAE-IVQDGLRIDGDPRAARDDIVGW 139
>pdb|1AKQ|A Chain A, D95a Oxidized Flavodoxin Mutant From D. Vulgaris
pdb|1AKU|A Chain A, D95a Hydroquinone Flavodoxin Mutant From D. Vulgaris
pdb|1AKV|A Chain A, D95a Semiquinone Flavodoxin Mutant From D. Vulgaris
Length = 147
Score = 34.7 bits (78), Expect = 0.21, Method: Composition-based stats.
Identities = 40/150 (26%), Positives = 59/150 (39%), Gaps = 15/150 (10%)
Query: 106 KVTIFFGTQTGTAEGFAKALADE-ARARYDKAIFKVVXXXXXXXXXXXXXXKLKKENIVF 164
K I +G+ TG E A+ +A E A A Y+ + ++V
Sbjct: 2 KALIVYGSTTGNTEYTAETIARELADAGYE--------VDSRDAASVEAGGLFEGFDLVL 53
Query: 165 FFLATYGDGEPTDNAARFYKWFTEQKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEI 224
+T+GD + + F F +E G Q K FG G YE+F ++E
Sbjct: 54 LGCSTWGD-DSIELQDDFIPLFDSLEETGA--QGRKVACFGCGASSYEYFCGAVDAIEEK 110
Query: 225 LANQGAKRLVPVGL--GDDDQCIEDDFSAW 252
L N GA+ +V GL D + DD W
Sbjct: 111 LKNLGAE-IVQDGLRIDGDPRAARDDIVGW 139
>pdb|1I1O|A Chain A, Room Temperature Crystal Structure Flavodoxin D. Vulgaris
Mutant Y98h At 2.0 Ang. Resolution
Length = 147
Score = 33.9 bits (76), Expect = 0.36, Method: Composition-based stats.
Identities = 39/150 (26%), Positives = 60/150 (40%), Gaps = 15/150 (10%)
Query: 106 KVTIFFGTQTGTAEGFAKALADE-ARARYDKAIFKVVXXXXXXXXXXXXXXKLKKENIVF 164
K I +G+ TG E A+ +A E A A Y+ + ++V
Sbjct: 2 KALIVYGSTTGNTEYTAETIARELADAGYE--------VDSRDAASVEAGGLFEGFDLVL 53
Query: 165 FFLATYGDGEPTDNAARFYKWFTEQKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEI 224
+T+GD + + F F +E G Q K FG G+ +E+F ++E
Sbjct: 54 LGCSTWGD-DSIELQDDFIPLFDSLEETGA--QGRKVACFGCGDSSHEYFCGAVDAIEEK 110
Query: 225 LANQGAKRLVPVGL--GDDDQCIEDDFSAW 252
L N GA+ +V GL D + DD W
Sbjct: 111 LKNLGAE-IVQDGLRIDGDPRAARDDIVGW 139
>pdb|1FX1|A Chain A, A Crystallographic Structural Study Of The Oxidation
States Of Desulfovibrio Vulgaris Flavodoxin
Length = 148
Score = 33.9 bits (76), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 60/150 (40%), Gaps = 15/150 (10%)
Query: 106 KVTIFFGTQTGTAEGFAKALADE-ARARYDKAIFKVVXXXXXXXXXXXXXXKLKKENIVF 164
K I +G+ TG E A+ +A + A A Y+ + ++V
Sbjct: 3 KALIVYGSTTGNTEYTAETIARQLANAGYE--------VDSRDAASVEAGGLFEGFDLVL 54
Query: 165 FFLATYGDGEPTDNAARFYKWFTEQKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEI 224
+T+GD + + F F +E G Q K FG G+ YE+F ++E
Sbjct: 55 LGCSTWGD-DSIELQDDFIPLFDSLEETGA--QGRKVACFGCGDSSYEYFCGAVDAIEEK 111
Query: 225 LANQGAKRLVPVGL--GDDDQCIEDDFSAW 252
L N GA+ +V GL D + DD W
Sbjct: 112 LKNLGAE-IVQDGLRIDGDPRAARDDIVGW 140
>pdb|1F4P|A Chain A, Y98w Flavodoxin Mutant 1.5a (D. Vulgaris)
Length = 147
Score = 33.5 bits (75), Expect = 0.37, Method: Composition-based stats.
Identities = 39/150 (26%), Positives = 60/150 (40%), Gaps = 15/150 (10%)
Query: 106 KVTIFFGTQTGTAEGFAKALADE-ARARYDKAIFKVVXXXXXXXXXXXXXXKLKKENIVF 164
K I +G+ TG E A+ +A E A A Y+ + ++V
Sbjct: 2 KALIVYGSTTGNTEYTAETIARELADAGYE--------VDSRDAASVEAGGLFEGFDLVL 53
Query: 165 FFLATYGDGEPTDNAARFYKWFTEQKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEI 224
+T+GD + + F F +E G Q K FG G+ +E+F ++E
Sbjct: 54 LGCSTWGD-DSIELQDDFIPLFDSLEETGA--QGRKVACFGCGDSSWEYFCGAVDAIEEK 110
Query: 225 LANQGAKRLVPVGL--GDDDQCIEDDFSAW 252
L N GA+ +V GL D + DD W
Sbjct: 111 LKNLGAE-IVQDGLRIDGDPRAARDDIVGW 139
>pdb|4HEQ|A Chain A, The Crystal Structure Of Flavodoxin From Desulfovibrio
Gigas
pdb|4HEQ|B Chain B, The Crystal Structure Of Flavodoxin From Desulfovibrio
Gigas
Length = 146
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 51/126 (40%), Gaps = 12/126 (9%)
Query: 106 KVTIFFGTQTGTAEGFAKALADEARAR-YDKAIFKVVXXXXXXXXXXXXXXKLKKENIVF 164
K I +G+ TG EG A+A+A + + + V + ++V
Sbjct: 3 KALIVYGSTTGNTEGVAEAIAKTLNSEGMETTVVNVADVTAPGLA--------EGYDVVL 54
Query: 165 FFLATYGDGEPTDNAARFYKWFTEQKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEI 224
+T+GD E + F + + G L+ K GVFG G+ Y +F V+++
Sbjct: 55 LGCSTWGDDE-IELQEDFVPLYEDLDRAG--LKDKKVGVFGCGDSSYTYFCGAVDVIEKK 111
Query: 225 LANQGA 230
GA
Sbjct: 112 AEELGA 117
>pdb|1AKR|A Chain A, G61a Oxidized Flavodoxin Mutant
Length = 147
Score = 33.1 bits (74), Expect = 0.49, Method: Composition-based stats.
Identities = 39/150 (26%), Positives = 59/150 (39%), Gaps = 15/150 (10%)
Query: 106 KVTIFFGTQTGTAEGFAKALADE-ARARYDKAIFKVVXXXXXXXXXXXXXXKLKKENIVF 164
K I +G+ TG E A+ +A E A A Y+ + ++V
Sbjct: 2 KALIVYGSTTGNTEYTAETIARELADAGYE--------VDSRDAASVEAGGLFEGFDLVL 53
Query: 165 FFLATYGDGEPTDNAARFYKWFTEQKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEI 224
+T+ D + + F F +E G Q K FG G+ YE+F ++E
Sbjct: 54 LGCSTWAD-DSIELQDDFIPLFDSLEETGA--QGRKVACFGCGDSSYEYFCGAVDAIEEK 110
Query: 225 LANQGAKRLVPVGL--GDDDQCIEDDFSAW 252
L N GA+ +V GL D + DD W
Sbjct: 111 LKNLGAE-IVQDGLRIDGDPRAARDDIVGW 139
>pdb|1AKT|A Chain A, G61n Oxidized Flavodoxin Mutant
Length = 147
Score = 33.1 bits (74), Expect = 0.51, Method: Composition-based stats.
Identities = 39/150 (26%), Positives = 59/150 (39%), Gaps = 15/150 (10%)
Query: 106 KVTIFFGTQTGTAEGFAKALADE-ARARYDKAIFKVVXXXXXXXXXXXXXXKLKKENIVF 164
K I +G+ TG E A+ +A E A A Y+ + ++V
Sbjct: 2 KALIVYGSTTGNTEYTAETIARELADAGYE--------VDSRDAASVEAGGLFEGFDLVL 53
Query: 165 FFLATYGDGEPTDNAARFYKWFTEQKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEI 224
+T+ D + + F F +E G Q K FG G+ YE+F ++E
Sbjct: 54 LGCSTWND-DSIELQDDFIPLFDSLEETGA--QGRKVACFGCGDSSYEYFCGAVDAIEEK 110
Query: 225 LANQGAKRLVPVGL--GDDDQCIEDDFSAW 252
L N GA+ +V GL D + DD W
Sbjct: 111 LKNLGAE-IVQDGLRIDGDPRAARDDIVGW 139
>pdb|1AZL|A Chain A, G61v Flavodoxin Mutant From Desulfovibrio Vulgaris
Length = 147
Score = 32.3 bits (72), Expect = 1.0, Method: Composition-based stats.
Identities = 39/150 (26%), Positives = 59/150 (39%), Gaps = 15/150 (10%)
Query: 106 KVTIFFGTQTGTAEGFAKALADE-ARARYDKAIFKVVXXXXXXXXXXXXXXKLKKENIVF 164
K I +G+ TG E A+ +A E A A Y+ + ++V
Sbjct: 2 KALIVYGSTTGNTEYTAETIARELADAGYE--------VDSRDAASVEAGGLFEGFDLVL 53
Query: 165 FFLATYGDGEPTDNAARFYKWFTEQKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEI 224
+T+ D + + F F +E G Q K FG G+ YE+F ++E
Sbjct: 54 LGCSTWVD-DSIELQDDFIPLFDSLEETGA--QGRKVACFGCGDSSYEYFCGAVDAIEEK 110
Query: 225 LANQGAKRLVPVGL--GDDDQCIEDDFSAW 252
L N GA+ +V GL D + DD W
Sbjct: 111 LKNLGAE-IVQDGLRIDGDPRAARDDIVGW 139
>pdb|1AKW|A Chain A, G61l Oxidized Flavodoxin Mutant
Length = 147
Score = 32.0 bits (71), Expect = 1.2, Method: Composition-based stats.
Identities = 39/150 (26%), Positives = 59/150 (39%), Gaps = 15/150 (10%)
Query: 106 KVTIFFGTQTGTAEGFAKALADE-ARARYDKAIFKVVXXXXXXXXXXXXXXKLKKENIVF 164
K I +G+ TG E A+ +A E A A Y+ + ++V
Sbjct: 2 KALIVYGSTTGNTEYTAETIARELADAGYE--------VDSRDAASVEAGGLFEGFDLVL 53
Query: 165 FFLATYGDGEPTDNAARFYKWFTEQKEGGEWLQKLKYGVFGLGNRQYEHFNKIAKVVDEI 224
+T+ D + + F F +E G Q K FG G+ YE+F ++E
Sbjct: 54 LGCSTWLD-DSIELQDDFIPLFDSLEETGA--QGRKVACFGCGDSSYEYFCGAVDAIEEK 110
Query: 225 LANQGAKRLVPVGL--GDDDQCIEDDFSAW 252
L N GA+ +V GL D + DD W
Sbjct: 111 LKNLGAE-IVQDGLRIDGDPRAARDDIVGW 139
>pdb|1OBO|A Chain A, W57l Flavodoxin From Anabaena
pdb|1OBO|B Chain B, W57l Flavodoxin From Anabaena
Length = 169
Score = 29.3 bits (64), Expect = 7.0, Method: Composition-based stats.
Identities = 11/24 (45%), Positives = 17/24 (70%)
Query: 105 QKVTIFFGTQTGTAEGFAKALADE 128
+K+ +F+GTQTG E A+ + DE
Sbjct: 2 KKIGLFYGTQTGKTESVAEIIRDE 25
>pdb|1OBV|A Chain A, Y94f Flavodoxin From Anabaena
Length = 169
Score = 29.3 bits (64), Expect = 7.3, Method: Composition-based stats.
Identities = 11/24 (45%), Positives = 17/24 (70%)
Query: 105 QKVTIFFGTQTGTAEGFAKALADE 128
+K+ +F+GTQTG E A+ + DE
Sbjct: 2 KKIGLFYGTQTGKTESVAEIIRDE 25
>pdb|1FLV|A Chain A, Structure Of The Oxidized Long Chain Flavodoxin From
Anabaena 7120 At 2 Angstroms Resolution
pdb|1RCF|A Chain A, Structure Of The Trigonal Form Of Recombinant Oxidized
Flavodoxin From Anabaena 7120 At 1.40 Angstroms
Resolution
Length = 169
Score = 29.3 bits (64), Expect = 7.3, Method: Composition-based stats.
Identities = 11/24 (45%), Positives = 17/24 (70%)
Query: 105 QKVTIFFGTQTGTAEGFAKALADE 128
+K+ +F+GTQTG E A+ + DE
Sbjct: 2 KKIGLFYGTQTGKTESVAEIIRDE 25
>pdb|1DX9|A Chain A, W57a Apoflavodoxin From Anabaena
pdb|1DX9|B Chain B, W57a Apoflavodoxin From Anabaena
pdb|1DX9|C Chain C, W57a Apoflavodoxin From Anabaena
pdb|1DX9|D Chain D, W57a Apoflavodoxin From Anabaena
Length = 169
Score = 29.3 bits (64), Expect = 7.3, Method: Composition-based stats.
Identities = 11/24 (45%), Positives = 17/24 (70%)
Query: 105 QKVTIFFGTQTGTAEGFAKALADE 128
+K+ +F+GTQTG E A+ + DE
Sbjct: 2 KKIGLFYGTQTGKTESVAEIIRDE 25
>pdb|1QHE|A Chain A, Energetics Of A Hydrogen Bond (Charged And Neutral) And Of
A Cation-Pi Interaction In Apoflavodoxin
pdb|1FTG|A Chain A, Structure Of Apoflavodoxin: Closure Of A
TyrosineTRYPTOPHAN AROMATIC Gate Leads To A Compact Fold
Length = 168
Score = 29.3 bits (64), Expect = 7.3, Method: Composition-based stats.
Identities = 11/24 (45%), Positives = 17/24 (70%)
Query: 105 QKVTIFFGTQTGTAEGFAKALADE 128
+K+ +F+GTQTG E A+ + DE
Sbjct: 1 KKIGLFYGTQTGKTESVAEIIRDE 24
>pdb|2KQU|A Chain A, F98n Apoflavodoxin From Anabaena Pcc 7119
Length = 169
Score = 29.3 bits (64), Expect = 7.3, Method: Composition-based stats.
Identities = 11/24 (45%), Positives = 17/24 (70%)
Query: 105 QKVTIFFGTQTGTAEGFAKALADE 128
+K+ +F+GTQTG E A+ + DE
Sbjct: 2 KKIGLFYGTQTGKTESVAEIIRDE 25
>pdb|2V5V|A Chain A, W57e Flavodoxin From Anabaena
pdb|2V5V|B Chain B, W57e Flavodoxin From Anabaena
Length = 169
Score = 29.3 bits (64), Expect = 7.3, Method: Composition-based stats.
Identities = 11/24 (45%), Positives = 17/24 (70%)
Query: 105 QKVTIFFGTQTGTAEGFAKALADE 128
+K+ +F+GTQTG E A+ + DE
Sbjct: 2 KKIGLFYGTQTGKTESVAEIIRDE 25
>pdb|2V5U|A Chain A, I92a Flavodoxin From Anabaena
pdb|2V5U|B Chain B, I92a Flavodoxin From Anabaena
Length = 169
Score = 29.3 bits (64), Expect = 7.3, Method: Composition-based stats.
Identities = 11/24 (45%), Positives = 17/24 (70%)
Query: 105 QKVTIFFGTQTGTAEGFAKALADE 128
+K+ +F+GTQTG E A+ + DE
Sbjct: 2 KKIGLFYGTQTGKTESVAEIIRDE 25
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.135 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,431,174
Number of Sequences: 62578
Number of extensions: 784862
Number of successful extensions: 1754
Number of sequences better than 100.0: 102
Number of HSP's better than 100.0 without gapping: 83
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 1501
Number of HSP's gapped (non-prelim): 141
length of query: 715
length of database: 14,973,337
effective HSP length: 106
effective length of query: 609
effective length of database: 8,340,069
effective search space: 5079102021
effective search space used: 5079102021
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)