Query 005074
Match_columns 715
No_of_seqs 375 out of 2377
Neff 7.9
Searched_HMMs 46136
Date Thu Mar 28 17:37:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005074.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/005074hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02418 delta-1-pyrroline-5-c 100.0 1E-124 3E-129 1090.5 76.0 710 1-715 2-718 (718)
2 TIGR01092 P5CS delta l-pyrroli 100.0 5E-122 1E-126 1071.4 74.9 701 9-714 2-711 (715)
3 PRK00197 proA gamma-glutamyl p 100.0 4.1E-85 8.9E-90 722.7 43.7 408 290-698 3-416 (417)
4 cd07079 ALDH_F18-19_ProA-GPR G 100.0 9.5E-84 2.1E-88 709.5 41.6 398 295-693 2-405 (406)
5 KOG2451 Aldehyde dehydrogenase 100.0 2.6E-82 5.6E-87 642.8 31.6 399 267-694 43-499 (503)
6 KOG2450 Aldehyde dehydrogenase 100.0 1E-82 2.3E-87 676.6 29.7 400 268-696 41-498 (501)
7 COG1012 PutA NAD-dependent ald 100.0 2.4E-79 5.2E-84 682.0 38.5 397 268-695 19-470 (472)
8 TIGR00407 proA gamma-glutamyl 100.0 1.5E-78 3.3E-83 662.6 38.7 388 300-688 1-398 (398)
9 PRK11241 gabD succinate-semial 100.0 7.4E-78 1.6E-82 675.4 40.1 398 267-693 30-481 (482)
10 PLN02419 methylmalonate-semial 100.0 1.3E-77 2.9E-82 678.6 39.3 399 268-694 134-590 (604)
11 PLN02174 aldehyde dehydrogenas 100.0 6.2E-77 1.3E-81 662.9 40.3 386 290-694 9-445 (484)
12 TIGR03374 ABALDH 1-pyrroline d 100.0 3.1E-76 6.7E-81 661.9 38.9 398 267-692 20-471 (472)
13 PLN02315 aldehyde dehydrogenas 100.0 1.1E-75 2.4E-80 660.4 38.5 404 266-694 37-495 (508)
14 PLN02766 coniferyl-aldehyde de 100.0 1.9E-75 4E-80 659.6 39.1 400 267-695 40-496 (501)
15 PLN02278 succinic semialdehyde 100.0 5.4E-75 1.2E-79 655.9 40.9 398 267-693 44-495 (498)
16 PRK13968 putative succinate se 100.0 5E-75 1.1E-79 651.0 39.8 396 267-693 11-460 (462)
17 PRK09406 gabD1 succinic semial 100.0 7E-75 1.5E-79 648.9 40.8 400 268-693 6-457 (457)
18 cd07130 ALDH_F7_AASADH NAD+-de 100.0 4E-75 8.6E-80 654.8 38.4 403 267-694 16-473 (474)
19 PLN02466 aldehyde dehydrogenas 100.0 4.6E-75 9.9E-80 659.0 38.3 398 268-694 78-532 (538)
20 cd07113 ALDH_PADH_NahF Escheri 100.0 6.9E-75 1.5E-79 653.9 39.1 401 267-693 19-476 (477)
21 cd07086 ALDH_F7_AASADH-like NA 100.0 1.2E-74 2.5E-79 652.2 39.2 402 267-693 17-476 (478)
22 cd07559 ALDH_ACDHII_AcoD-like 100.0 1.6E-74 3.4E-79 650.5 39.6 398 267-693 20-479 (480)
23 cd07117 ALDH_StaphAldA1 Unchar 100.0 1.6E-74 3.5E-79 649.0 39.4 398 267-693 20-474 (475)
24 cd07140 ALDH_F1L_FTFDH 10-form 100.0 1.4E-74 3.1E-79 650.1 38.8 401 267-693 25-485 (486)
25 cd07116 ALDH_ACDHII-AcoD Ralst 100.0 2.7E-74 5.9E-79 649.4 39.9 397 267-693 20-478 (479)
26 TIGR03216 OH_muco_semi_DH 2-hy 100.0 2.2E-74 4.8E-79 650.4 39.2 401 267-693 18-480 (481)
27 PRK13252 betaine aldehyde dehy 100.0 3.4E-74 7.4E-79 650.0 40.5 399 267-694 26-481 (488)
28 cd07142 ALDH_F2BC Arabidosis a 100.0 2.4E-74 5.2E-79 649.3 37.8 396 267-691 23-475 (476)
29 cd07107 ALDH_PhdK-like Nocardi 100.0 5.5E-74 1.2E-78 643.9 40.5 396 268-693 2-455 (456)
30 cd07148 ALDH_RL0313 Uncharacte 100.0 4.2E-74 9.1E-79 643.8 38.9 401 268-692 4-455 (455)
31 PTZ00381 aldehyde dehydrogenas 100.0 7.6E-74 1.7E-78 643.3 38.5 386 290-694 6-439 (493)
32 cd07106 ALDH_AldA-AAD23400 Str 100.0 1.2E-73 2.7E-78 639.7 40.0 393 268-691 2-445 (446)
33 TIGR01780 SSADH succinate-semi 100.0 6.5E-74 1.4E-78 641.5 37.0 392 268-688 2-448 (448)
34 cd07085 ALDH_F6_MMSDH Methylma 100.0 1.4E-73 3E-78 643.9 39.9 400 267-693 20-477 (478)
35 PRK13473 gamma-aminobutyraldeh 100.0 1E-73 2.2E-78 644.8 38.4 401 266-694 20-474 (475)
36 TIGR02299 HpaE 5-carboxymethyl 100.0 1.6E-73 3.6E-78 644.9 40.1 397 267-694 20-478 (488)
37 cd07090 ALDH_F9_TMBADH NAD+-de 100.0 1.8E-73 3.8E-78 640.3 38.8 398 268-695 2-457 (457)
38 cd07151 ALDH_HBenzADH NADP+-de 100.0 2.6E-73 5.5E-78 639.6 40.1 397 268-693 15-464 (465)
39 PLN02467 betaine aldehyde dehy 100.0 1.7E-73 3.6E-78 643.4 38.6 400 268-694 28-489 (503)
40 cd07143 ALDH_AldA_AN0554 Asper 100.0 3.7E-73 8.1E-78 638.9 38.4 397 268-693 27-480 (481)
41 cd07110 ALDH_F10_BADH Arabidop 100.0 5.2E-73 1.1E-77 636.4 39.4 395 268-691 2-455 (456)
42 PLN00412 NADP-dependent glycer 100.0 9E-73 2E-77 637.6 41.1 404 266-694 34-488 (496)
43 cd07097 ALDH_KGSADH-YcbD Bacil 100.0 6.2E-73 1.3E-77 637.8 39.5 398 266-691 17-472 (473)
44 cd07152 ALDH_BenzADH NAD-depen 100.0 1.2E-72 2.5E-77 631.2 40.4 390 273-691 1-442 (443)
45 cd07101 ALDH_SSADH2_GabD2 Myco 100.0 1.1E-72 2.3E-77 633.1 40.0 395 269-691 2-453 (454)
46 cd07145 ALDH_LactADH_F420-Bios 100.0 9.6E-73 2.1E-77 634.2 39.2 398 268-692 4-456 (456)
47 cd07147 ALDH_F21_RNP123 Aldehy 100.0 1.2E-72 2.6E-77 633.1 39.9 398 268-692 4-452 (452)
48 cd07144 ALDH_ALD2-YMR170C Sacc 100.0 1.5E-72 3.2E-77 636.5 40.6 397 268-693 28-483 (484)
49 cd07120 ALDH_PsfA-ACA09737 Pse 100.0 6.6E-73 1.4E-77 632.7 37.0 394 269-692 3-455 (455)
50 cd07115 ALDH_HMSADH_HapE Pseud 100.0 1.2E-72 2.6E-77 632.9 39.1 396 269-693 3-452 (453)
51 cd07094 ALDH_F21_LactADH-like 100.0 1.6E-72 3.6E-77 632.1 39.7 398 268-692 4-453 (453)
52 PLN02203 aldehyde dehydrogenas 100.0 2.3E-72 4.9E-77 628.6 40.6 386 290-694 5-444 (484)
53 cd07109 ALDH_AAS00426 Uncharac 100.0 1.5E-72 3.2E-77 632.4 39.1 393 269-691 3-453 (454)
54 cd07089 ALDH_CddD-AldA-like Rh 100.0 1.4E-72 3E-77 632.2 38.8 399 269-692 3-459 (459)
55 cd07150 ALDH_VaniDH_like Pseud 100.0 1.5E-72 3.2E-77 632.4 38.7 396 268-692 4-451 (451)
56 cd07124 ALDH_PutA-P5CDH-RocA D 100.0 3.6E-72 7.9E-77 636.1 42.0 428 237-693 12-511 (512)
57 cd07141 ALDH_F1AB_F2_RALDH1 NA 100.0 1.9E-72 4.2E-77 634.6 39.3 396 268-692 27-480 (481)
58 TIGR01804 BADH glycine betaine 100.0 1E-72 2.2E-77 635.4 36.3 393 267-688 17-467 (467)
59 cd07119 ALDH_BADH-GbsA Bacillu 100.0 1.9E-72 4.2E-77 635.6 38.5 398 267-694 17-474 (482)
60 cd07118 ALDH_SNDH Gluconobacte 100.0 1.5E-72 3.2E-77 631.2 36.2 394 269-691 3-453 (454)
61 cd07125 ALDH_PutA-P5CDH Delta( 100.0 7.5E-72 1.6E-76 633.8 41.0 425 242-695 18-509 (518)
62 cd07091 ALDH_F1-2_Ald2-like AL 100.0 3.7E-72 8E-77 632.4 37.4 397 267-692 23-476 (476)
63 TIGR01237 D1pyr5carbox2 delta- 100.0 8.8E-72 1.9E-76 632.3 40.6 399 267-693 50-510 (511)
64 cd07098 ALDH_F15-22 Aldehyde d 100.0 8.6E-72 1.9E-76 628.0 39.9 405 269-693 2-464 (465)
65 TIGR01236 D1pyr5carbox1 delta- 100.0 7.2E-72 1.6E-76 632.9 38.9 401 266-694 49-521 (533)
66 cd07138 ALDH_CddD_SSP0762 Rhod 100.0 8.1E-72 1.8E-76 628.0 39.0 391 267-691 18-465 (466)
67 cd07083 ALDH_P5CDH ALDH subfam 100.0 1.4E-71 2.9E-76 629.7 41.0 399 267-692 36-498 (500)
68 cd07123 ALDH_F4-17_P5CDH Delta 100.0 1.3E-71 2.7E-76 631.4 40.5 400 266-693 49-519 (522)
69 PRK09457 astD succinylglutamic 100.0 1.9E-71 4.1E-76 626.5 41.7 397 267-694 19-471 (487)
70 PRK03137 1-pyrroline-5-carboxy 100.0 1.3E-71 2.9E-76 631.2 40.7 398 266-692 53-512 (514)
71 cd07131 ALDH_AldH-CAJ73105 Unc 100.0 1.1E-71 2.4E-76 629.2 39.6 399 268-694 19-477 (478)
72 cd07088 ALDH_LactADH-AldA Esch 100.0 1.1E-71 2.3E-76 628.0 39.4 396 267-691 17-467 (468)
73 PRK09847 gamma-glutamyl-gamma- 100.0 9.9E-72 2.1E-76 628.8 38.8 398 267-693 39-492 (494)
74 TIGR03250 PhnAcAld_DH putative 100.0 1.4E-71 3E-76 625.4 39.7 397 268-693 22-471 (472)
75 cd07108 ALDH_MGR_2402 Magnetos 100.0 1.2E-71 2.6E-76 625.5 39.1 395 268-691 2-456 (457)
76 cd07102 ALDH_EDX86601 Uncharac 100.0 1.7E-71 3.7E-76 624.0 39.9 395 269-691 2-451 (452)
77 PRK09407 gabD2 succinic semial 100.0 2.4E-71 5.3E-76 629.9 40.9 398 269-694 38-492 (524)
78 TIGR03240 arg_catab_astD succi 100.0 4E-71 8.6E-76 623.9 41.0 397 267-694 17-469 (484)
79 cd07100 ALDH_SSADH1_GabD1 Myco 100.0 2.5E-71 5.4E-76 617.3 38.7 374 293-691 1-428 (429)
80 cd07139 ALDH_AldA-Rv0768 Mycob 100.0 1.7E-71 3.8E-76 626.5 37.6 395 267-691 18-470 (471)
81 cd07136 ALDH_YwdH-P39616 Bacil 100.0 2.3E-71 5.1E-76 616.3 37.8 381 295-694 2-428 (449)
82 cd07099 ALDH_DDALDH Methylomon 100.0 4E-71 8.6E-76 621.2 39.5 395 269-691 2-452 (453)
83 cd07112 ALDH_GABALDH-PuuC Esch 100.0 2.2E-71 4.9E-76 622.9 37.4 396 268-692 7-462 (462)
84 cd07092 ALDH_ABALDH-YdcW Esche 100.0 4.2E-71 9E-76 620.5 38.6 396 268-691 2-449 (450)
85 TIGR01722 MMSDH methylmalonic 100.0 7.2E-71 1.6E-75 621.2 39.5 399 267-693 20-476 (477)
86 cd07111 ALDH_F16 Aldehyde dehy 100.0 2.9E-71 6.2E-76 622.4 35.7 385 267-689 41-477 (480)
87 cd07121 ALDH_EutE Ethanolamine 100.0 5E-71 1.1E-75 610.9 35.3 372 290-692 3-422 (429)
88 cd07135 ALDH_F14-YMR110C Sacch 100.0 9.2E-71 2E-75 611.7 37.3 383 290-691 4-435 (436)
89 cd07114 ALDH_DhaS Uncharacteri 100.0 6.6E-71 1.4E-75 619.5 36.1 395 269-692 3-457 (457)
90 cd07105 ALDH_SaliADH Salicylal 100.0 1.2E-70 2.5E-75 612.9 37.7 378 292-692 1-432 (432)
91 PF00171 Aldedh: Aldehyde dehy 100.0 3.6E-71 7.8E-76 622.5 33.8 393 268-690 12-462 (462)
92 cd07137 ALDH_F3FHI Plant aldeh 100.0 1.2E-70 2.7E-75 610.0 37.4 379 295-692 3-432 (432)
93 cd07146 ALDH_PhpJ Streptomyces 100.0 1.8E-70 4E-75 613.3 39.0 395 268-691 4-450 (451)
94 cd07132 ALDH_F3AB Aldehyde deh 100.0 2.1E-70 4.6E-75 610.5 38.7 381 295-695 2-429 (443)
95 cd07133 ALDH_CALDH_CalB Conife 100.0 1.9E-70 4.1E-75 609.9 38.0 379 295-691 2-433 (434)
96 KOG2456 Aldehyde dehydrogenase 100.0 6.6E-71 1.4E-75 565.1 30.7 383 292-694 3-433 (477)
97 cd07149 ALDH_y4uC Uncharacteri 100.0 5.3E-70 1.1E-74 612.6 40.2 397 268-691 4-452 (453)
98 PRK15398 aldehyde dehydrogenas 100.0 2.7E-70 5.8E-75 609.7 37.2 378 290-695 35-455 (465)
99 cd07126 ALDH_F12_P5CDH Delta(1 100.0 4.5E-70 9.8E-75 609.3 38.4 380 267-670 16-470 (489)
100 cd07093 ALDH_F8_HMSADH Human a 100.0 7.9E-70 1.7E-74 611.0 39.1 395 269-692 3-455 (455)
101 TIGR01238 D1pyr5carbox3 delta- 100.0 5.4E-70 1.2E-74 613.8 36.9 409 242-689 23-500 (500)
102 cd07082 ALDH_F11_NP-GAPDH NADP 100.0 1.1E-69 2.3E-74 612.3 39.3 399 267-692 20-472 (473)
103 cd07095 ALDH_SGSD_AstD N-succi 100.0 5.3E-70 1.1E-74 605.8 36.2 374 292-690 1-429 (431)
104 cd07103 ALDH_F5_SSADH_GabD Mit 100.0 1.2E-69 2.5E-74 609.2 38.3 395 268-691 2-450 (451)
105 cd07104 ALDH_BenzADH-like ALDH 100.0 3E-69 6.4E-74 602.8 39.2 377 292-691 1-430 (431)
106 TIGR02278 PaaN-DH phenylacetic 100.0 1.6E-69 3.5E-74 626.0 37.8 396 267-693 19-496 (663)
107 cd07128 ALDH_MaoC-N N-terminal 100.0 1.4E-69 3.1E-74 610.1 35.8 392 267-691 19-502 (513)
108 PRK11904 bifunctional proline 100.0 1.2E-68 2.7E-73 639.0 41.1 430 239-695 535-1028(1038)
109 cd07081 ALDH_F20_ACDH_EutE-lik 100.0 2.4E-68 5.1E-73 589.4 37.9 381 293-692 1-438 (439)
110 PRK11903 aldehyde dehydrogenas 100.0 1.1E-68 2.4E-73 604.6 35.4 396 267-692 23-506 (521)
111 cd07134 ALDH_AlkH-like Pseudom 100.0 4.8E-68 1E-72 590.4 37.6 378 295-691 2-432 (433)
112 cd07087 ALDH_F3-13-14_CALDH-li 100.0 6.6E-68 1.4E-72 588.9 37.4 378 295-691 2-425 (426)
113 PRK10090 aldehyde dehydrogenas 100.0 3.4E-68 7.3E-73 585.5 33.9 353 319-694 1-408 (409)
114 TIGR02518 EutH_ACDH acetaldehy 100.0 2.1E-67 4.6E-72 589.8 40.9 384 290-696 7-447 (488)
115 PRK11563 bifunctional aldehyde 100.0 6.5E-68 1.4E-72 616.8 36.1 396 267-693 23-508 (675)
116 cd07077 ALDH-like NAD(P)+-depe 100.0 1.9E-66 4.1E-71 572.6 40.3 382 298-691 1-396 (397)
117 cd07129 ALDH_KGSADH Alpha-Keto 100.0 4.7E-67 1E-71 585.8 35.9 380 293-687 1-449 (454)
118 cd07122 ALDH_F20_ACDH Coenzyme 100.0 3E-66 6.6E-71 571.5 36.3 376 293-692 1-435 (436)
119 PRK11809 putA trifunctional tr 100.0 1.4E-66 3E-71 625.6 35.5 385 266-689 662-1111(1318)
120 PRK11905 bifunctional proline 100.0 4.3E-66 9.3E-71 623.5 38.6 415 240-693 538-1018(1208)
121 cd07084 ALDH_KGSADH-like ALDH 100.0 1.4E-65 3.1E-70 571.6 37.2 375 294-690 2-440 (442)
122 TIGR02288 PaaN_2 phenylacetic 100.0 2.2E-65 4.9E-70 575.2 37.7 367 268-656 70-518 (551)
123 PRK13805 bifunctional acetalde 100.0 2.4E-64 5.1E-69 602.7 39.0 386 290-698 11-455 (862)
124 cd07127 ALDH_PAD-PaaZ Phenylac 100.0 7.8E-62 1.7E-66 548.0 39.0 406 268-693 70-546 (549)
125 KOG2454 Betaine aldehyde dehyd 100.0 1.3E-63 2.9E-68 505.3 21.6 418 268-706 69-546 (583)
126 cd07078 ALDH NAD(P)+ dependent 100.0 8E-61 1.7E-65 535.4 37.8 375 294-691 1-431 (432)
127 COG0014 ProA Gamma-glutamyl ph 100.0 4.9E-59 1.1E-63 482.4 35.0 408 291-699 3-417 (417)
128 cd06534 ALDH-SF NAD(P)+-depend 100.0 4.6E-59 1E-63 510.2 35.2 355 299-691 2-366 (367)
129 KOG2452 Formyltetrahydrofolate 100.0 2.3E-57 4.9E-62 468.8 23.0 379 269-693 443-880 (881)
130 COG4230 Delta 1-pyrroline-5-ca 100.0 2.4E-55 5.2E-60 463.7 23.4 385 265-689 129-574 (769)
131 KOG4165 Gamma-glutamyl phospha 100.0 2E-50 4.3E-55 402.9 34.4 422 293-714 2-429 (433)
132 KOG2453 Aldehyde dehydrogenase 100.0 1.3E-51 2.8E-56 411.2 14.8 402 270-696 40-496 (507)
133 KOG2455 Delta-1-pyrroline-5-ca 100.0 1.6E-45 3.4E-50 380.0 23.6 387 276-690 87-544 (561)
134 COG0263 ProB Glutamate 5-kinas 100.0 2.4E-41 5.2E-46 346.7 25.6 256 11-283 3-260 (369)
135 cd04256 AAK_P5CS_ProBA AAK_P5C 100.0 1.6E-40 3.5E-45 346.7 27.0 271 9-280 3-283 (284)
136 KOG1154 Gamma-glutamyl kinase 100.0 8.9E-41 1.9E-45 320.7 22.0 277 7-287 2-280 (285)
137 PRK12314 gamma-glutamyl kinase 100.0 7E-40 1.5E-44 340.0 25.5 261 7-283 2-265 (266)
138 PRK13402 gamma-glutamyl kinase 100.0 1.7E-38 3.7E-43 341.1 25.0 254 11-283 2-258 (368)
139 PTZ00489 glutamate 5-kinase; P 100.0 1.5E-37 3.2E-42 320.0 25.6 254 7-283 1-260 (264)
140 PRK05429 gamma-glutamyl kinase 100.0 1E-37 2.2E-42 338.3 25.0 259 7-283 1-262 (372)
141 cd04242 AAK_G5K_ProB AAK_G5K_P 100.0 2.3E-37 5E-42 319.9 25.0 247 16-280 1-250 (251)
142 TIGR01027 proB glutamate 5-kin 100.0 7.7E-37 1.7E-41 330.1 25.0 252 15-283 1-254 (363)
143 COG0548 ArgB Acetylglutamate k 100.0 2.8E-33 6.1E-38 282.7 20.3 241 14-281 2-264 (265)
144 cd04241 AAK_FomA-like AAK_FomA 100.0 3.6E-32 7.8E-37 281.9 19.0 243 16-280 1-252 (252)
145 PRK12353 putative amino acid k 100.0 5.4E-31 1.2E-35 278.6 22.7 256 13-281 1-313 (314)
146 COG1608 Predicted archaeal kin 100.0 2.9E-31 6.2E-36 259.0 18.7 240 17-281 3-251 (252)
147 cd07080 ALDH_Acyl-CoA-Red_LuxC 100.0 1.5E-30 3.2E-35 288.3 25.7 318 292-645 25-390 (422)
148 TIGR00746 arcC carbamate kinas 100.0 1.3E-30 2.8E-35 273.3 23.1 243 15-281 1-309 (310)
149 cd04237 AAK_NAGS-ABP AAK_NAGS- 100.0 3.2E-30 7E-35 269.7 21.4 242 14-280 18-280 (280)
150 CHL00202 argB acetylglutamate 100.0 3.6E-30 7.9E-35 270.1 21.4 242 14-281 23-283 (284)
151 PLN02512 acetylglutamate kinas 100.0 1.1E-29 2.4E-34 269.2 22.3 243 13-281 46-308 (309)
152 PRK00942 acetylglutamate kinas 100.0 1.2E-29 2.6E-34 267.1 20.3 240 14-282 23-282 (283)
153 PRK12352 putative carbamate ki 100.0 4.9E-29 1.1E-33 261.7 23.6 257 14-282 2-315 (316)
154 cd04250 AAK_NAGK-C AAK_NAGK-C: 100.0 1.7E-29 3.8E-34 265.2 19.8 241 14-280 14-279 (279)
155 PRK14058 acetylglutamate/acety 100.0 2.3E-29 5E-34 262.4 20.0 236 16-282 1-267 (268)
156 PRK05279 N-acetylglutamate syn 100.0 1.2E-28 2.7E-33 275.4 21.3 244 14-283 25-292 (441)
157 PRK12686 carbamate kinase; Rev 100.0 2.7E-28 5.9E-33 254.2 22.3 256 13-281 1-311 (312)
158 PRK12454 carbamate kinase-like 100.0 5.7E-28 1.2E-32 251.1 23.8 251 14-281 2-312 (313)
159 cd02115 AAK Amino Acid Kinases 100.0 4.5E-29 9.8E-34 258.4 14.6 239 18-280 1-248 (248)
160 TIGR01890 N-Ac-Glu-synth amino 100.0 7.4E-28 1.6E-32 267.9 22.8 240 13-283 16-280 (429)
161 PRK00358 pyrH uridylate kinase 100.0 1.4E-27 3.1E-32 244.2 22.6 228 15-280 1-230 (231)
162 cd04249 AAK_NAGK-NC AAK_NAGK-N 100.0 8.6E-28 1.9E-32 248.9 19.4 236 17-280 1-252 (252)
163 cd04239 AAK_UMPK-like AAK_UMPK 100.0 1.7E-27 3.7E-32 243.2 21.2 227 16-280 1-228 (229)
164 cd04236 AAK_NAGS-Urea AAK_NAGS 100.0 6.3E-28 1.4E-32 248.4 17.5 221 14-279 35-270 (271)
165 cd04234 AAK_AK AAK_AK: Amino A 100.0 1.2E-27 2.7E-32 243.6 19.5 208 16-265 1-220 (227)
166 cd04252 AAK_NAGK-fArgBP AAK_NA 100.0 1.1E-27 2.5E-32 246.7 19.1 228 18-280 2-248 (248)
167 cd04246 AAK_AK-DapG-like AAK_A 100.0 1.6E-27 3.4E-32 245.1 20.0 222 16-265 1-233 (239)
168 cd04235 AAK_CK AAK_CK: Carbama 100.0 2.8E-27 6.1E-32 246.5 21.6 251 16-280 1-307 (308)
169 cd04238 AAK_NAGK-like AAK_NAGK 100.0 1.3E-27 2.7E-32 248.3 18.3 234 17-280 1-256 (256)
170 cd04251 AAK_NAGK-UC AAK_NAGK-U 100.0 4.4E-28 9.5E-33 251.1 14.7 222 17-279 1-256 (257)
171 PRK14558 pyrH uridylate kinase 100.0 4.3E-27 9.3E-32 240.4 21.8 223 15-282 1-230 (231)
172 cd04261 AAK_AKii-LysC-BS AAK_A 100.0 1.6E-27 3.4E-32 245.0 18.5 222 16-265 1-233 (239)
173 cd04260 AAK_AKi-DapG-BS AAK_AK 99.9 4.2E-27 9.2E-32 242.2 19.1 220 17-264 2-237 (244)
174 TIGR00761 argB acetylglutamate 99.9 1.9E-27 4.2E-32 243.3 16.3 213 16-258 1-231 (231)
175 PF00696 AA_kinase: Amino acid 99.9 3E-27 6.4E-32 243.9 15.3 229 15-260 1-242 (242)
176 TIGR02075 pyrH_bact uridylate 99.9 3.9E-26 8.5E-31 233.4 23.2 228 14-280 1-232 (233)
177 PRK08841 aspartate kinase; Val 99.9 3.7E-26 7.9E-31 249.3 21.9 222 15-264 2-234 (392)
178 cd04254 AAK_UMPK-PyrH-Ec UMP k 99.9 4.2E-26 9E-31 233.0 20.9 228 15-280 1-230 (231)
179 cd04255 AAK_UMPK-MosAB AAK_UMP 99.9 6.6E-26 1.4E-30 233.9 22.0 228 15-280 31-261 (262)
180 PRK12354 carbamate kinase; Rev 99.9 4.5E-26 9.9E-31 236.3 20.5 248 15-283 1-301 (307)
181 PLN02825 amino-acid N-acetyltr 99.9 9.6E-26 2.1E-30 250.8 20.9 248 13-283 16-365 (515)
182 PRK14557 pyrH uridylate kinase 99.9 5.5E-25 1.2E-29 225.1 23.2 235 11-284 1-240 (247)
183 PRK04531 acetylglutamate kinas 99.9 3E-25 6.4E-30 241.2 20.9 211 14-283 36-250 (398)
184 TIGR00656 asp_kin_monofn aspar 99.9 1.4E-25 2.9E-30 248.3 18.6 231 15-283 1-244 (401)
185 PRK14556 pyrH uridylate kinase 99.9 9.7E-25 2.1E-29 220.6 23.0 238 7-281 8-247 (249)
186 PRK08210 aspartate kinase I; R 99.9 3E-25 6.6E-30 245.4 19.7 232 14-283 1-248 (403)
187 PRK06635 aspartate kinase; Rev 99.9 5E-25 1.1E-29 244.0 19.8 232 14-283 1-243 (404)
188 TIGR02076 pyrH_arch uridylate 99.9 9.2E-25 2E-29 221.9 20.1 218 17-280 1-220 (221)
189 PRK09411 carbamate kinase; Rev 99.9 1.4E-24 3E-29 223.1 21.3 242 15-281 2-296 (297)
190 COG0527 LysC Aspartokinases [A 99.9 1.1E-24 2.3E-29 239.6 20.8 239 15-283 2-290 (447)
191 cd04253 AAK_UMPK-PyrH-Pf AAK_U 99.9 1.9E-24 4.1E-29 219.4 20.4 217 16-280 1-220 (221)
192 COG0549 ArcC Carbamate kinase 99.9 2E-23 4.4E-28 208.1 23.6 255 15-281 1-311 (312)
193 PRK07431 aspartate kinase; Pro 99.9 6.1E-24 1.3E-28 245.6 21.0 234 14-283 1-245 (587)
194 COG0528 PyrH Uridylate kinase 99.9 2.2E-22 4.8E-27 197.4 20.8 231 12-281 3-237 (238)
195 PRK08373 aspartate kinase; Val 99.9 1.2E-22 2.6E-27 215.9 20.2 226 13-264 2-271 (341)
196 TIGR00657 asp_kinases aspartat 99.9 7.7E-23 1.7E-27 228.7 19.3 239 15-283 1-284 (441)
197 cd04244 AAK_AK-LysC-like AAK_A 99.9 1.8E-22 4E-27 212.6 20.1 228 16-265 1-291 (298)
198 TIGR02078 AspKin_pair Pyrococc 99.9 1.9E-22 4.1E-27 213.3 15.6 232 16-283 1-271 (327)
199 cd04245 AAK_AKiii-YclM-BS AAK_ 99.9 9.5E-22 2.1E-26 205.2 20.6 226 16-265 1-281 (288)
200 cd04259 AAK_AK-DapDC AAK_AK-Da 99.9 7.1E-22 1.5E-26 207.3 18.9 229 16-265 1-288 (295)
201 cd04257 AAK_AK-HSDH AAK_AK-HSD 99.9 7.2E-22 1.6E-26 207.3 18.8 228 16-265 1-287 (294)
202 cd04243 AAK_AK-HSDH-like AAK_A 99.9 8.1E-22 1.8E-26 206.8 17.9 227 16-265 1-286 (293)
203 PRK06291 aspartate kinase; Pro 99.9 2.7E-21 5.9E-26 216.9 20.9 238 16-283 2-304 (465)
204 PRK09084 aspartate kinase III; 99.9 2.2E-21 4.8E-26 216.0 19.2 234 16-283 1-290 (448)
205 cd04258 AAK_AKiii-LysC-EC AAK_ 99.9 2.9E-20 6.4E-25 194.4 19.9 225 16-265 1-285 (292)
206 PRK05925 aspartate kinase; Pro 99.8 9.1E-21 2E-25 209.3 16.5 236 14-283 1-281 (440)
207 PRK09034 aspartate kinase; Rev 99.8 3.9E-20 8.4E-25 206.6 20.0 235 16-283 1-290 (454)
208 PLN02551 aspartokinase 99.8 4.7E-20 1E-24 207.2 20.3 238 14-283 51-349 (521)
209 cd04247 AAK_AK-Hom3 AAK_AK-Hom 99.8 8.6E-20 1.9E-24 191.7 17.7 235 16-282 2-305 (306)
210 PRK09466 metL bifunctional asp 99.8 1.9E-19 4.1E-24 212.0 17.3 240 10-282 6-300 (810)
211 PRK09436 thrA bifunctional asp 99.8 1.3E-18 2.9E-23 206.4 18.7 237 16-283 1-298 (819)
212 PRK08961 bifunctional aspartat 99.8 1.3E-18 2.9E-23 208.6 18.2 239 14-282 7-305 (861)
213 cd04240 AAK_UC AAK_UC: Unchara 99.7 2.8E-17 6E-22 164.1 16.5 201 18-280 1-203 (203)
214 PRK09181 aspartate kinase; Val 99.7 3.3E-16 7.1E-21 174.6 14.5 162 93-283 140-312 (475)
215 cd04248 AAK_AK-Ectoine AAK_AK- 99.7 1.4E-15 3.1E-20 157.6 17.4 153 93-265 134-297 (304)
216 KOG0456 Aspartate kinase [Amin 99.5 1.1E-13 2.4E-18 142.8 12.6 168 93-283 193-376 (559)
217 COG2054 Uncharacterized archae 99.4 2.5E-11 5.5E-16 113.8 16.1 119 145-282 90-210 (212)
218 PF05893 LuxC: Acyl-CoA reduct 99.4 6.7E-10 1.5E-14 122.1 29.7 244 396-644 81-368 (399)
219 KOG2436 Acetylglutamate kinase 99.1 3.5E-10 7.7E-15 121.8 10.5 243 13-282 94-359 (520)
220 KOG2449 Methylmalonate semiald 98.8 2.4E-09 5.2E-14 95.9 2.4 68 586-653 76-143 (157)
221 PF07368 DUF1487: Protein of u 98.5 8.8E-07 1.9E-11 87.3 11.0 173 514-695 7-212 (215)
222 PRK11905 bifunctional proline 97.9 4.2E-05 9.2E-10 94.8 10.2 102 392-510 1068-1175(1208)
223 PF00815 Histidinol_dh: Histid 96.1 1.5 3.3E-05 48.2 22.9 282 363-692 69-378 (412)
224 cd06572 Histidinol_dh Histidin 95.5 4.9 0.00011 44.1 24.2 282 363-692 56-365 (390)
225 PRK00877 hisD bifunctional his 94.9 7.6 0.00017 43.0 23.3 281 363-692 84-392 (425)
226 TIGR00069 hisD histidinol dehy 94.7 4.2 9.1E-05 44.5 20.3 250 392-692 78-361 (393)
227 PLN02926 histidinol dehydrogen 94.6 9 0.0002 42.5 23.9 280 363-692 83-395 (431)
228 PRK12447 histidinol dehydrogen 94.4 10 0.00022 42.0 22.5 282 363-692 77-387 (426)
229 PRK13770 histidinol dehydrogen 93.9 12 0.00026 41.3 23.2 277 363-692 76-382 (416)
230 COG0141 HisD Histidinol dehydr 92.8 6.2 0.00014 43.3 17.3 250 363-653 80-349 (425)
231 PRK13769 histidinol dehydrogen 92.4 19 0.00041 39.2 23.5 213 392-652 83-303 (368)
232 PRK11809 putA trifunctional tr 81.6 3.4 7.5E-05 52.4 7.6 92 393-500 1178-1269(1318)
233 COG1778 Low specificity phosph 69.1 21 0.00045 34.0 7.3 58 193-269 10-67 (170)
234 TIGR02726 phenyl_P_delta pheny 54.0 64 0.0014 31.2 8.2 66 193-279 9-76 (169)
235 PF13376 OmdA: Bacteriocin-pro 45.9 29 0.00062 27.6 3.6 34 290-323 7-40 (63)
236 PF13714 PEP_mutase: Phosphoen 43.8 29 0.00062 35.7 4.2 182 425-650 4-198 (238)
237 TIGR01689 EcbF-BcbF capsule bi 40.1 51 0.0011 30.3 4.8 47 14-60 1-48 (126)
238 PF10686 DUF2493: Protein of u 39.0 76 0.0016 26.0 5.1 44 15-67 3-47 (71)
239 cd01390 HMGB-UBF_HMG-box HMGB- 36.9 78 0.0017 24.7 5.0 35 298-332 30-64 (66)
240 PF09011 HMG_box_2: HMG-box do 34.5 1E+02 0.0022 25.1 5.3 34 298-331 34-67 (73)
241 PF06945 DUF1289: Protein of u 34.0 45 0.00098 25.4 2.9 21 306-326 29-49 (51)
242 PTZ00174 phosphomannomutase; P 31.4 92 0.002 31.9 5.7 43 14-61 5-47 (247)
243 PF00505 HMG_box: HMG (high mo 31.3 1E+02 0.0022 24.3 4.8 35 299-333 31-65 (69)
244 PRK10513 sugar phosphate phosp 31.2 84 0.0018 32.4 5.4 43 14-61 3-45 (270)
245 smart00398 HMG high mobility g 30.0 1.3E+02 0.0029 23.5 5.3 35 299-333 32-66 (70)
246 PF03437 BtpA: BtpA family; I 29.0 1.3E+02 0.0029 31.2 6.3 115 174-300 123-252 (254)
247 PRK01158 phosphoglycolate phos 28.6 1E+02 0.0023 30.8 5.5 43 14-61 3-45 (230)
248 PRK09875 putative hydrolase; P 28.1 4.1E+02 0.0089 28.2 9.9 72 109-198 170-244 (292)
249 PRK15126 thiamin pyrimidine py 27.8 1.1E+02 0.0024 31.7 5.6 42 14-60 2-43 (272)
250 PRK10530 pyridoxal phosphate ( 27.4 1.1E+02 0.0025 31.3 5.6 42 14-60 3-44 (272)
251 PRK10976 putative hydrolase; P 26.9 1.1E+02 0.0025 31.4 5.5 43 14-61 2-44 (266)
252 cd01388 SOX-TCF_HMG-box SOX-TC 26.7 1.4E+02 0.0031 24.1 4.9 34 298-331 31-64 (72)
253 PLN02887 hydrolase family prot 23.2 1.5E+02 0.0032 34.8 5.9 49 7-60 301-349 (580)
254 cd00084 HMG-box High Mobility 22.5 2.2E+02 0.0049 21.8 5.3 33 298-330 30-62 (66)
255 COG4430 Uncharacterized protei 20.8 1.8E+02 0.004 28.6 5.0 99 192-324 73-173 (200)
256 TIGR00620 sporelyase spore pho 20.8 1.4E+02 0.0031 29.7 4.5 60 191-259 26-90 (199)
257 TIGR01684 viral_ppase viral ph 20.0 2.8E+02 0.0061 29.5 6.7 51 13-66 125-176 (301)
No 1
>PLN02418 delta-1-pyrroline-5-carboxylate synthase
Probab=100.00 E-value=1.2e-124 Score=1090.50 Aligned_cols=710 Identities=84% Similarity=1.236 Sum_probs=618.4
Q ss_pred CCcchhhhhhhcccceEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhcccCCCc
Q 005074 1 MDSTDSSRAFVKDVKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSL 80 (715)
Q Consensus 1 ~~~~~~~~~~~~~~k~~VIKiGGs~l~~~~~~~~~~~l~~l~~~I~~l~~~G~~vviVhGgg~~i~~~~l~~~~~~~~~~ 80 (715)
|..-+-+|+.++.+|++||||||+++.+.++.++.+++.+++++|+++++.|+++|||.||+..+|...++.......-+
T Consensus 2 ~~~~~~~~~~~~~~~~iViK~G~ssl~~~~~~~~~~~i~~l~~~i~~l~~~g~~vvlVsSga~~~g~~~l~~~~~~~~~~ 81 (718)
T PLN02418 2 MEEEDRSRAFLRDVKRVVIKVGTAVVTRDDGRLALGRLGALCEQIKELNSDGYEVILVSSGAVGVGRQRLRYRRLVNSSF 81 (718)
T ss_pred CccccchhhHHhhCCEEEEEeCCCeecCCCCCccHHHHHHHHHHHHHHHHCCCEEEEEecchHHHHHHHHhhhhhhhccc
Confidence 34445577778788999999999999998888999999999999999999999999999999999988776543211111
Q ss_pred ccccCccccchHHHHHHcchHHHHHHHHHHhhcCCCCcceEEecccccCchhHHhHHHHHHHHHHhCCCeEEEeCCCcee
Q 005074 81 ADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVS 160 (715)
Q Consensus 81 ~~~~~~~~~l~~~~~~a~G~~~~~~l~~~~l~~~g~~~~~~~~~~~d~~~~~~~~~~~~~i~~ll~~g~iPVv~g~d~v~ 160 (715)
.++......+.++++.++||..++.+|+..|+.+|+++.|+++|+++|.+...+.+..+.|+.+|++|+|||+++||.+.
T Consensus 82 ~~~~~~~~~~~~qa~aa~Gq~~l~~~~~~~f~~~g~~~~qillT~~~~~~~~~~~~~~~~l~~ll~~g~iPVv~~nd~v~ 161 (718)
T PLN02418 82 ADLQKPQMELDGKACAAVGQSELMALYDTLFSQLDVTASQLLVTDSDFRDPDFRKQLSETVESLLDLRVIPIFNENDAVS 161 (718)
T ss_pred ccCCCCcchHHHHHHHHhhHHHHHHHHHHHHHHcCCeEEEEEecHhHhcchhHhHhHHHHHHHHHHCCCEEEEcCCCCcc
Confidence 11111111334568999999999999999999999999999999999988888888889999999999999999999888
Q ss_pred ccCCCCCCCCceeecchhHHHHHHhhcCCCEEEEeccCCccccCCCCCcCccccceeeccchhhHHhcCCCCCcccCChH
Q 005074 161 TRKAPYEDSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMT 240 (715)
Q Consensus 161 ~~~~~~~~~~~~~~~~D~~A~~lA~~L~A~~li~lTDVdGV~~~dP~~p~a~~i~~is~~e~~~~~~~g~~~~~~~ggM~ 240 (715)
+...++......++|+|++|+.+|.+|+|++|+|+|||||||++||++|++++|++++..+....+..++.+.+++|||.
T Consensus 162 ~~~~~~~~~~~~~~d~D~~A~~lA~~l~Ad~li~~TdVdGvy~~~p~~~~a~~i~~i~~~~~~~~i~~~~~s~~~tGGM~ 241 (718)
T PLN02418 162 TRRAPYEDSSGIFWDNDSLAALLALELKADLLILLSDVEGLYTGPPSDPSSKLIHTYIKEKHQDEITFGEKSRVGRGGMT 241 (718)
T ss_pred ccccccccccCeecCcHHHHHHHHHHcCCCEEEEeecCCeeecCCCCCCCceEcceecccchhhhhhcccccccCCCCcH
Confidence 75322211122458899999999999999999999999999999998899999999988776554555555668999999
Q ss_pred HHHHHHHHHHHcCCcEEEEeCCCcchHHHHHcCCcceeEEecCCccccc--HhhHHHHHHHHHHHHHHHhcCCHHHHHHH
Q 005074 241 AKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRDAHLWVK--QVGAREMAVAARESSRRLQALQSQDRRKI 318 (715)
Q Consensus 241 ~Kl~aa~~a~~~gv~v~I~~g~~~~~l~~~~tg~~iGT~i~~~~~~~~~--~~~v~~av~~A~~a~~~w~~~~~~~R~~~ 318 (715)
+|+++|..+.++|++++|+||+.++.+.++++|+..||++.++.|.|.. .+++++++++|++||+.|+++|.++|.++
T Consensus 242 ~Kl~Aa~~a~~~Gi~v~I~~g~~~~~l~~~l~g~~~GT~i~~~~~~~~~~~~~~~~~~~~aA~~A~~~W~~~~~~eR~~~ 321 (718)
T PLN02418 242 AKVKAAVNAASAGIPVVITSGYALDNIRKVLRGERVGTLFHQDAHLWAPSKEVGAREMAVAARESSRKLQALSSEERKKI 321 (718)
T ss_pred HHHHHHHHHHHCCCcEEEeCCCCcchHHHHhcCCCCceEeccccchhhhccHHHHHHHHHHHHHHHHHHHhCCHHHHHHH
Confidence 9999999999999999999999999999999999999999999898862 24699999999999999999999999999
Q ss_pred HHHHHHHHHHCHHHHHHHHHHHHHHHHhhchhHHHHHHhhcChhHHHHHHHHHHHHhcccccccccccccccCCCeEEEE
Q 005074 319 LLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRILADMEEPIGQILKRTELADGLILEK 398 (715)
Q Consensus 319 L~~~a~~l~~~~~~l~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 398 (715)
|++++++|++|+++|++++.+|++.++|+|++..+.+.+..+..|+..+++.++++++..++.|+..+......+...++
T Consensus 322 L~~~a~~l~~~~~ela~~~~~d~~~~~E~G~~k~~~~~~~~~~~ev~~~~~~~~~~a~~~~~~g~~~~~~~~~~~~~~~~ 401 (718)
T PLN02418 322 LLDVADALEANEELIKAENELDVAAAQEAGYEKSLVSRLTLKPGKIASLAASIRQLADMEDPIGRVLKRTEVADGLVLEK 401 (718)
T ss_pred HHHHHHHHHHhHHHHHHHHHHhHHHHHHhCCchhHHHHHhccHHHHHHHHHHHHHHhcCccccCccccccccCCCceEEE
Confidence 99999999999999999999988888888855554444434456899999999999987656665543111123444678
Q ss_pred eeeceeEEEEEcCCChhhHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccccCcCc----eEEecCcchhhH
Q 005074 399 TSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDTVGEKL----IGLVTSREEIPD 474 (715)
Q Consensus 399 ~~~PlGVV~~I~p~~P~~~~~~~~~ALaaGN~vvlKps~~tp~t~~~l~~~~~~al~~alP~gv----v~vv~~~~~~~~ 474 (715)
+|+|+|||++|+||||..++++++|||++||+||+||||.||+|+..+++++++ +||+|+ +|+|++++++++
T Consensus 402 ~r~PlGVV~~I~PwnP~~~~~kiapALaaGNtVVlKPse~tp~s~~~l~~l~~e----AlP~gv~~~v~nvv~g~~~~g~ 477 (718)
T PLN02418 402 TSCPLGVLLIIFESRPDALVQIASLAIRSGNGLLLKGGKEAARSNAILHKVITD----AIPKTVGGKLIGLVTSRDEIPD 477 (718)
T ss_pred EEEeeeEEEEEeCCCcHHHHHHHHHHHHhCCEEEEeCCccchHHHHHHHHHHHH----HccccCCcceEEEeCCcHHHHH
Confidence 899999999999999976569999999999999999999999999999999987 478885 999997667899
Q ss_pred hhcCCCCccEEEeecCHHHHHHHHhhcCCCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCccccccceEEEcCccc
Q 005074 475 LLKLDDVIDLVIPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLA 554 (715)
Q Consensus 475 ~l~~~~~v~~v~fTGS~~~g~~i~~~a~~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~f~n~g~C~a~~rv~V~~~i~ 554 (715)
+|..||+||+|+||||++.++.+++.+.||++||||||||+||++|||+|.|++.+++|+|.|+|+|+|++|+|||++||
T Consensus 478 ~L~~~~~v~~V~FTGSt~~i~~~aa~~~k~v~lELGGk~p~iV~~DADld~A~~~i~~~~~~nGQ~C~a~~RllVh~~i~ 557 (718)
T PLN02418 478 LLKLDDVIDLVIPRGSNKLVSQIKASTKIPVLGHADGICHVYVDKSADMDMAKRIVVDAKTDYPAACNAMETLLVHKDLV 557 (718)
T ss_pred HHhhCCCCCEEEEeCCHHHHHHHHHhcCCCEEEeCCCcceEEEeCCCCHHHHHHHHHHHhCCCCCccccCcEEEEecccc
Confidence 99999999999999999999999887789999999999999999999999999999999999966999999999999999
Q ss_pred Cch-hHHHHHHHHHhcCCeEecCccccccccCCCCCCccccccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEecCHHH
Q 005074 555 CNG-ALNELVVELQHEGVGLFGGPRASKLLQIPETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKV 633 (715)
Q Consensus 555 d~~-f~~~l~~~~~~~~~~~~g~~~~~~~~pv~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~i~t~d~~~ 633 (715)
|+ .+..+++.+.+.|+++.|+++..+++.+++|++|+||+||||++|++|+|+||||+++|+++|||++||||+|.++
T Consensus 558 -d~G~~~~~i~~a~~~Ga~l~Gg~~~~g~l~~~~~~i~~eE~FgPv~~i~~~~~~dEAI~~aN~s~yGLsa~V~T~d~~~ 636 (718)
T PLN02418 558 -QNGGLNDLLVALRSAGVTLYGGPRASKLLNIPEAQSFHHEYSSLACTVEIVDDVHAAIDHIHRHGSAHTDCIVTEDSEV 636 (718)
T ss_pred -ccccHHHHHHHHHHCCCEEECCccccCeeCCCCchhhhCCcCCeeEEEEEECCHHHHHHHHhcCCCCCeeEEEcCCHHH
Confidence 68 7788889989999988877543244334578999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCcceEEEcCCCCCCCCCccCCcccccccccccccccccccccceEEEEEEEcCcccccCCCCceeeeccccC
Q 005074 634 AETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHVVDGDQGVVYTHKNLAL 713 (715)
Q Consensus 634 ~~~~~~~l~~G~V~iN~~~~~~~~~pfG~g~~sG~~~~~~~~~g~~gl~~ft~~K~v~~~~~~~~~~~~~~~~~~~~~~~ 713 (715)
+++|++++++|+||||.++.+.+..||||+++||+|+|+.+++|++|+++||+.|+|+++.+++|+++++.+|+|+.|||
T Consensus 637 a~~~a~~l~aG~V~IN~~~~~~~~~PfGG~k~SG~stGr~~~~G~~gl~~~t~~K~v~~g~g~~~~~~~~~~~~~~~~~~ 716 (718)
T PLN02418 637 AEIFLRQVDSAAVFHNASTRFSDGARFGLGAEVGISTGRIHARGPVGVEGLLTTRWILRGNGQVVDGDKGVVYTHKDLPL 716 (718)
T ss_pred HHHHHHhCCeeEEEEeCCCCCCCCCCCCCcccccccCCcCCCCCHHHHHHHhcEEEEEECCCeecCCCCCcccccccccC
Confidence 99999999999999999877677789999999999777766679999999999999999999999999999999999999
Q ss_pred CC
Q 005074 714 QS 715 (715)
Q Consensus 714 ~~ 715 (715)
||
T Consensus 717 ~~ 718 (718)
T PLN02418 717 QS 718 (718)
T ss_pred CC
Confidence 97
No 2
>TIGR01092 P5CS delta l-pyrroline-5-carboxylate synthetase. This protein contains a glutamate 5-kinase (ProB, EC 2.7.2.11) region followed by a gamma-glutamyl phosphate reductase (ProA, EC 1.2.1.41) region.
Probab=100.00 E-value=4.6e-122 Score=1071.42 Aligned_cols=701 Identities=75% Similarity=1.107 Sum_probs=617.0
Q ss_pred hhhcccceEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhcccCCCcccccCccc
Q 005074 9 AFVKDVKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQN 88 (715)
Q Consensus 9 ~~~~~~k~~VIKiGGs~l~~~~~~~~~~~l~~l~~~I~~l~~~G~~vviVhGgg~~i~~~~l~~~~~~~~~~~~~~~~~~ 88 (715)
++++..|++|||||||+++++++.++.+.+.+++++|+.|++.|+++|||.||+.++|+..++.+......+.++.....
T Consensus 2 ~~~~~~~~iViKiGss~lt~~~~~~~~~~l~~l~~~i~~l~~~g~~vilVsSGA~a~G~~~~~~~~~~~~~~~~~~~~~~ 81 (715)
T TIGR01092 2 AFLKDVKRIVVKVGTAVVTRGDGRLALGRLGSICEQLSELNSDGREVILVTSGAVAFGRQRLRHRILVNSSFADLQKPQP 81 (715)
T ss_pred chhhcCCEEEEEeCcceeECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEccchHHhchHHhccchhccccccccCCCCc
Confidence 44666799999999999999888899999999999999999999999999999999999887655332222333333344
Q ss_pred cchHHHHHHcchHHHHHHHHHHhhcCCCCcceEEecccccCchhHHhHHHHHHHHHHhCCCeEEEeCCCceeccCCCCCC
Q 005074 89 ELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYED 168 (715)
Q Consensus 89 ~l~~~~~~a~G~~~~~~l~~~~l~~~g~~~~~~~~~~~d~~~~~~~~~~~~~i~~ll~~g~iPVv~g~d~v~~~~~~~~~ 168 (715)
.++++++.++||+.++.+|+..|..+++.+.|+++|++||.++..+.+..+.|+.||+.|+|||+++||.+.+.+.++++
T Consensus 82 ~~~~qa~aa~gq~~L~~~y~~~f~~~~i~~aQ~Llt~~d~~~~~~~~~~~~~l~~lL~~g~iPVin~nD~V~~~~~~~~~ 161 (715)
T TIGR01092 82 ELDGKACAAVGQSGLMALYETMFTQLDITAAQILVTDLDFRDEQFRRQLNETVHELLRMNVVPVVNENDAVSTRAAPYSD 161 (715)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHcCCeeEEEEechhhcccHHHHHHHHHHHHHHHHCCCEEEEcCCCccccccccccc
Confidence 56788999999999999999999999999999999999999988888888999999999999999999999986554332
Q ss_pred CCceeecchhHHHHHHhhcCCCEEEEeccCCccccCCCCCcCccccceeeccchhhHHhcCCCCCcccCChHHHHHHHHH
Q 005074 169 SSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYC 248 (715)
Q Consensus 169 ~~~~~~~~D~~A~~lA~~L~A~~li~lTDVdGV~~~dP~~p~a~~i~~is~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~ 248 (715)
..+.++|+|++|+.+|.+|+||+|+|+|||||||++||++|++++|++++..+..+.+..++.+.+++|||.+|+++|..
T Consensus 162 ~~g~~~d~D~lAa~lA~~l~Ad~LiilTDVdGVy~~dP~~~~a~~I~~i~~~~~~~~i~~~~~~~~~tGGM~~Kl~aa~~ 241 (715)
T TIGR01092 162 SQGIFWDNDSLAALLALELKADLLILLSDVEGLYDGPPSDDDSKLIDTFYKEKHQGEITFGTKSRLGRGGMTAKVKAAVW 241 (715)
T ss_pred ccceecchHHHHHHHHHHcCCCEEEEEeCCCeeeCCCCCCCCCeEeeeecccchhhhhccCcccccCCCCchHHHHHHHH
Confidence 23347999999999999999999999999999999999889999999999877664555555566889999999999999
Q ss_pred HHHcCCcEEEEeCCCcchHHHHHcCCcceeEEecCCcccccH--hhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Q 005074 249 AACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRDAHLWVKQ--VGAREMAVAARESSRRLQALQSQDRRKILLDVADAL 326 (715)
Q Consensus 249 a~~~gv~v~I~~g~~~~~l~~~~tg~~iGT~i~~~~~~~~~~--~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l 326 (715)
+.++|++++|+||..++.+.+++.|+..||++..+.|-|... +++++.+++|++||++|+.+|.++|.++|++++++|
T Consensus 242 a~~~gi~v~I~~g~~~~~l~~~l~g~~~GT~~~~~~~~~~~~~~~~~~~~~~~A~~A~~~w~~~~~~~R~~~L~~la~~l 321 (715)
T TIGR01092 242 AAYGGTPVIIASGTAPKNITKVVEGKKVGTLFHEDAHLWPTVEQTGERDMAVAARESSRMLQALSSEQRKEILHDIADAL 321 (715)
T ss_pred HHHCCCeEEEeCCCCcchHHHHhcCCCCceEecccchhhhhhhHHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999887766411 358999999999999999999999999999999999
Q ss_pred HHCHHHHHHHHHHHHHHHHhhchhHHHHHHhhcChhHHHHHHHHHHHHhcccccccccccccccCCCeEEEEeeeceeEE
Q 005074 327 EANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRILADMEEPIGQILKRTELADGLILEKTSCPLGVL 406 (715)
Q Consensus 327 ~~~~~~l~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~PlGVV 406 (715)
++|+++|++++.+|+..+++.+..+.++.++..+..+++.+++.+++|++..++.|...+......+...+++|+|+|||
T Consensus 322 ~~~~eei~~e~gkdl~~a~~~~~~~~~~~el~~~~~ei~~~~~~l~~~a~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVV 401 (715)
T TIGR01092 322 EDNEDEILAENKKDVAAAQGAGYAASLVARLSMSPSKISSLAISLRQLAAMEDPIGRVLKRTRIADNLILEKTSVPIGVL 401 (715)
T ss_pred HHHHHHHHHHHhhhHHHHHhcCcchhHHHHHhCCHHHHHHHHHHHHHHhcCCCcccccccccccCCCceeEEEEeeceEE
Confidence 99999999999999988776666777888999999999999999999998555556544211112234467889999999
Q ss_pred EEEcCCChhhHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccccCcC----ceEEecCcchhhHhhcCCCCc
Q 005074 407 LIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDTVGEK----LIGLVTSREEIPDLLKLDDVI 482 (715)
Q Consensus 407 ~~I~p~~P~~~~~~~~~ALaaGN~vvlKps~~tp~t~~~l~~~~~~al~~alP~g----vv~vv~~~~~~~~~l~~~~~v 482 (715)
++|+||||.+++++++|||+|||+||+||||.||+|+..++++++++ ||+| ++|+|+++++++++|..||+|
T Consensus 402 ~~I~PwNP~~~~~~~~~ALaaGN~vvlKpse~tp~t~~~l~~l~~~a----lp~g~~~~~~~~v~~~~~~~~~l~~~~~v 477 (715)
T TIGR01092 402 LIVFESRPDALVQIASLAIRSGNGLLLKGGKEAARSNAILHKVITEA----IPIHVGKKLIGLVTSREEIPDLLKLDDVI 477 (715)
T ss_pred EEEeCCChHHHHHHHHHHHHhCCEEEEcCcccchHHHHHHHHHHHHH----cCCCCCCcEEEEeCChHHHHHHHhcCCCc
Confidence 99999999766799999999999999999999999999999999974 6665 789998666788999999999
Q ss_pred cEEEeecCHHHHHHHHhhcCCCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCccccccceEEEcCcccCch-hHHH
Q 005074 483 DLVIPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNG-ALNE 561 (715)
Q Consensus 483 ~~v~fTGS~~~g~~i~~~a~~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~f~n~g~C~a~~rv~V~~~i~d~~-f~~~ 561 (715)
|+|+||||+++||.|+++|+||+++|||||||+||++||||+.|++.+++++|.|+|+|+|++|+|||++|| |+ ++.+
T Consensus 478 d~I~fTGS~~vG~~i~~~A~~pv~lElgGk~p~iV~~dADl~~A~~~i~~~~~~~GQ~C~a~~rvlV~~~i~-d~~~~~~ 556 (715)
T TIGR01092 478 DLVIPRGSNKLVSQIKKSTKIPVLGHADGICHVYVDKSASVDMAKRIVRDAKCDYPAACNAMETLLVHKDLL-RNGLLDD 556 (715)
T ss_pred cEEEEcCCHHHHHHHHHhCCCCEEEEcCCcceEEECCCCCHHHHHHHHHHHhCCCCCccccCcEEEEehhhc-cchhHHH
Confidence 999999999999999988889999999999999999999999999888888887766999999999999999 56 7888
Q ss_pred HHHHHHhcCCeEecCccccccccC--CCCCCccccccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEecCHHHHHHHHH
Q 005074 562 LVVELQHEGVGLFGGPRASKLLQI--PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLC 639 (715)
Q Consensus 562 l~~~~~~~~~~~~g~~~~~~~~pv--~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~i~t~d~~~~~~~~~ 639 (715)
+++.+.+.|+.++|+.+...++++ +++++|+||+||||++|++|+|+||||+++|+++|||++||||+|.+++++|++
T Consensus 557 ~v~~~~~~Ga~l~Gg~~~~~~~~~~~~~~~i~~eE~FGPvl~v~~~~~~deAi~~~N~~~~gLa~~ift~d~~~a~~~~~ 636 (715)
T TIGR01092 557 LIDMLRTEGVTIHGGPRFAAYLTFNISETKSFRTEYSSLACTVEIVDDVYDAIDHIHKHGSAHTDCIVTEDENVAEFFLQ 636 (715)
T ss_pred HHHHHHHCCCEEECCcchhheeccCCCCchhhhccccCceEEEEEECCHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHHH
Confidence 888888888888877543334442 468999999999999999999999999999999999999999999999999999
Q ss_pred hcCcceEEEcCCCCCCCCCccCCcccccccccccccccccccccceEEEEEEEcCcccccCCCCceeeeccccCC
Q 005074 640 QVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHVVDGDQGVVYTHKNLALQ 714 (715)
Q Consensus 640 ~l~~G~V~iN~~~~~~~~~pfG~g~~sG~~~~~~~~~g~~gl~~ft~~K~v~~~~~~~~~~~~~~~~~~~~~~~~ 714 (715)
++++|+|+||.++...+.+||||+++||+|+++.|++|++|+++||+.|+|.++.+++|+++++.+|+|+.||+.
T Consensus 637 ~i~sG~V~vN~~~~~~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~v~~g~g~~~~~~~~~~~~~~~~~~~ 711 (715)
T TIGR01092 637 HVDSAAVFHNASTRFSDGFRFGLGAEVGISTSRIHARGPVGVEGLLTTRWLLRGKGQVVSGDHGLVYTHKDLPIP 711 (715)
T ss_pred hCCeeEEEEeCCCCCCCCCCCcCccccccccCCCCCCChhHHHHhceEEEEEECCCeecCCCCCcceecccCCcc
Confidence 999999999998766777899999999998766667899999999999999999999999999999999999863
No 3
>PRK00197 proA gamma-glutamyl phosphate reductase; Provisional
Probab=100.00 E-value=4.1e-85 Score=722.72 Aligned_cols=408 Identities=42% Similarity=0.716 Sum_probs=371.9
Q ss_pred HhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhhchhHHHHHHhhcChhHHHHHHH
Q 005074 290 QVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAK 369 (715)
Q Consensus 290 ~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~i~~~~~ 369 (715)
-+|+++++++|++||+.|+++|.++|.++|++++++|++|+++|++++++|+++++++|++++..+++..+..+++.+++
T Consensus 3 ~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~g~~~~~g~~~~~~~~~~~~~~ev~~~~~ 82 (417)
T PRK00197 3 MEYLEELGRRAKAASRKLAQLSTAQKNRALLAIADALEANAAEILAANAKDLAAARANGLSAAMLDRLLLTEARIEGIAE 82 (417)
T ss_pred hhHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCHHHHHHhcCCHHHHHHHHH
Confidence 36899999999999999999999999999999999999999999999999999999888888877888888889999999
Q ss_pred HHHHHhcccccccccccccccCCCeEEEEeeeceeEEEEEcCCChhhHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHH
Q 005074 370 SIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKV 449 (715)
Q Consensus 370 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~~P~~~~~~~~~ALaaGN~vvlKps~~tp~t~~~l~~~ 449 (715)
.+++++.+.+..|...+....+.+...+++++|+|||++|+||||++++++++|||+|||+||+||||.||+|+.+++++
T Consensus 83 ~~~~~a~~~~~~g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~p~~~~~~~~~~ALaaGN~vVlKPs~~tp~t~~~l~~l 162 (417)
T PRK00197 83 GLRQVAALPDPVGEVLDGWTLPNGLRIGRVRVPLGVIGVIYESRPNVTVDAAALCLKSGNAVILRGGSEAIHSNRALVAV 162 (417)
T ss_pred HHHHHhhcCCCccccccceecCCCceEEEEecCceEEEEEcCCCchHHHHHHHHHHHhCCeEEEecChhhhHHHHHHHHH
Confidence 99999876655554433211122345688999999999999998888899999999999999999999999999999999
Q ss_pred HHHhcccc-cCcCceEEecC-c-chhhHhhcCCCCccEEEeecCHHHHHHHHhhcCCCEEEecCCcceEEEcCCCCHHHH
Q 005074 450 ITSAIPDT-VGEKLIGLVTS-R-EEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVA 526 (715)
Q Consensus 450 ~~~al~~a-lP~gvv~vv~~-~-~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a~~~~~lElGGk~p~iV~~dADl~~A 526 (715)
+.+++.++ +|+|++|+|++ + ++++++|..||+||+|+||||+++|++|++.+.||+++|||||||+||++|||+|.|
T Consensus 163 ~~~~l~~aGlP~gv~~~v~g~~~~~~~~~l~~~~~v~~V~fTGS~~~g~~i~~~a~~~~~lELGGk~p~IV~~dAdl~~A 242 (417)
T PRK00197 163 IQEALEEAGLPADAVQLVETTDRAAVGELLKLDGYVDVIIPRGGAGLIRRVVENATVPVIEHGDGICHIYVDESADLDKA 242 (417)
T ss_pred HHHHHHHcCcChhhEEEecCCChHHHHHHhccCCCccEEEecCCHHHHHHHHHhcCCCEEeecCCcceEEEeCCCCHHHH
Confidence 99888889 99999999984 4 558899999999999999999999999998889999999999999999999999999
Q ss_pred HHHHHhhccCCCccccccceEEEcCcccCchhHHHHHHHHHhcCCeEecCcccccccc-C--CCCCCccccccCceEEEE
Q 005074 527 KNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLQ-I--PETRLFHHEYNSMVCTVE 603 (715)
Q Consensus 527 ~~~iv~~~f~n~g~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~~~~g~~~~~~~~p-v--~~~~~~~eE~FGPVl~v~ 603 (715)
++.+++|+|.|+|+|+|++|+|||++|| |+|+++|+++++++++++.|++...+++| | ++|++++||+|||||+|+
T Consensus 243 a~~iv~~~~~n~G~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~~~~~~~~~~~~~PTi~~~~~~i~~eE~FGPVl~v~ 321 (417)
T PRK00197 243 LKIVLNAKTQRPSVCNALETLLVHEAIA-EEFLPKLAEALAEAGVELRGDEAALALLPDVVPATEEDWDTEYLDLILAVK 321 (417)
T ss_pred HHHHHHhccCCCcccccceEEEEEHHHh-HHHHHHHHHHHHHCCCeEecCHHHHHhhcccccCCcchhhhhhhCceEEEE
Confidence 9999999999988999999999999999 79999999999999988776654334668 4 578999999999999999
Q ss_pred EeCCHHHHHHHHHhcCCCceeEEEecCHHHHHHHHHhcCcceEEEcCCCCCCCCCccCCccccccccccccccccccccc
Q 005074 604 IVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEG 683 (715)
Q Consensus 604 ~~~~~deAi~~aN~~~~GL~a~i~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~~~pfG~g~~sG~~~~~~~~~g~~gl~~ 683 (715)
+|+|+||||+++|+++|||++||||+|.+++++|++++++|+|+||+++...+..|||++++||+|.++.+++|++|+++
T Consensus 322 ~~~~~deAi~~aN~~~~GL~a~V~t~d~~~~~~~~~~l~~G~v~VN~~~~~~~~~p~G~~~~sG~g~~~~~~~g~~~l~~ 401 (417)
T PRK00197 322 VVDSLDEAIAHINRYGSGHTEAIVTEDYAAAERFLNEVDSAAVYVNASTRFTDGGEFGLGAEIGISTQKLHARGPMGLEE 401 (417)
T ss_pred EeCCHHHHHHHHHhcCCCCceEEEeCCHHHHHHHHHhCCeeEEEEeCCCccCCCCccccchhheeecCCCcCCCccchHh
Confidence 99999999999999999999999999999999999999999999999877777889999999999866777889999999
Q ss_pred ceEEEEEEEcCcccc
Q 005074 684 LLTTRWILRGNGHVV 698 (715)
Q Consensus 684 ft~~K~v~~~~~~~~ 698 (715)
||+.|+++++++++|
T Consensus 402 ~~~~k~v~~~~~~~~ 416 (417)
T PRK00197 402 LTTYKYIVLGDGQIR 416 (417)
T ss_pred hcEEEEEEECCCeeC
Confidence 999999999999876
No 4
>cd07079 ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate reductase (GPR), aldehyde dehydrogenase families 18 and 19. Gamma-glutamyl phosphate reductase (GPR), a L-proline biosynthetic pathway (PBP) enzyme that catalyzes the NADPH dependent reduction of L-gamma-glutamyl 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The glutamate route of the PBP involves two enzymatic steps catalyzed by gamma-glutamyl kinase (GK, EC 2.7.2.11) and GPR (EC 1.2.1.41). These enzymes are fused into the bifunctional enzyme, ProA or delta(1)-pyrroline-5-carboxylate synthetase (P5CS) in plants and animals, whereas they are separate enzymes in bacteria and yeast. In humans, the P5CS (ALDH18A1), an inner mitochondrial membrane enzyme, is essential to the de novo synthesis of the amino acids proline and arginine. Tomato (Lycopersicon esculentum) has both the prokaryotic-like polycistronic operons encoding GK and GPR (PRO1, ALDH19) and the full-length, bifunctional P5CS (PRO2, ALDH18B1).
Probab=100.00 E-value=9.5e-84 Score=709.46 Aligned_cols=398 Identities=45% Similarity=0.760 Sum_probs=360.3
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhhchhHHHHHHhhcChhHHHHHHHHHHHH
Q 005074 295 EMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRIL 374 (715)
Q Consensus 295 ~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~~ 374 (715)
+.+++|++||+.|+++|.++|.++|++++++|++|+++|++++++|+++++++|+.+++.+++..+..+++.+++.++++
T Consensus 2 ~~~~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~gk~~e~G~~~a~~~~l~~~~~ev~~~~~~~~~~ 81 (406)
T cd07079 2 ELAKRAKAASRALATLSTEQKNAALLAIADALEANRDEILEANAKDLAAAREAGLSEALLDRLLLTPERIEAMAEGLRQV 81 (406)
T ss_pred hHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhchHHHHHHhhhhHHHHHHcCCCHHHHhHhcCCHHHHHHHHHHHHHH
Confidence 57889999999999999999999999999999999999999999999999998888877788888888999999999999
Q ss_pred hcccccccccccccccCCCeEEEEeeeceeEEEEEcCCChhhHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhc
Q 005074 375 ADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAI 454 (715)
Q Consensus 375 ~~~~~~~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~~P~~~~~~~~~ALaaGN~vvlKps~~tp~t~~~l~~~~~~al 454 (715)
+...+..|...+....+.+...+++|+|+|||++|+||||++++++++|||+|||+||+|||+.||+++..++++++++|
T Consensus 82 a~~~~~~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~~p~~~~~~~~~ALaaGN~vVlKps~~tp~~~~~l~~~~~~~l 161 (406)
T cd07079 82 AALPDPVGEVLRGWTLPNGLQIEKVRVPLGVIGIIYESRPNVTVDAAALCLKSGNAVILRGGSEALHSNRALVEIIQEAL 161 (406)
T ss_pred HhcCCCCcccccceeccCccceeEEecceEEEEEecCCCcchHHHHHHHHHHhCCEEEEeCCchhhhHHHHHHHHHHHHH
Confidence 86655445433221112234567889999999999999888888999999999999999999999999999999999888
Q ss_pred ccc-cCcCceEEecC-c-chhhHhhcCCCCccEEEeecCHHHHHHHHhhcCCCEEEecCCcceEEEcCCCCHHHHHHHHH
Q 005074 455 PDT-VGEKLIGLVTS-R-EEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVI 531 (715)
Q Consensus 455 ~~a-lP~gvv~vv~~-~-~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a~~~~~lElGGk~p~iV~~dADl~~A~~~iv 531 (715)
+++ +|+|++|+|++ + ++++++|.+||+||+|+||||+++|++|+++|.||+++|||||||+||++|||||.|++.++
T Consensus 162 ~~aG~P~gvv~~v~g~~~~~~~~~l~~~~~v~~i~fTGS~~~G~~i~~~a~~pv~lELGGk~p~IV~~dADl~~Aa~~i~ 241 (406)
T cd07079 162 EEAGLPEDAVQLIPDTDREAVQELLKLDDYIDLIIPRGGAGLIRFVVENATIPVIKHGDGNCHVYVDESADLEMAVRIVV 241 (406)
T ss_pred HHcCCCcccEEEecCCChHHHHHHHcCCCCccEEEeCCCHHHHHHHHHhcCCCEEeecCCcceEEEeCCCCHHHHHHHHH
Confidence 889 99999999995 4 36799999999999999999999999999888999999999999999999999999999999
Q ss_pred hhccCCCccccccceEEEcCcccCchhHHHHHHHHHhcCCeEecCccccccc-c-C-CCCCCccccccCceEEEEEeCCH
Q 005074 532 DAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLL-Q-I-PETRLFHHEYNSMVCTVEIVDDV 608 (715)
Q Consensus 532 ~~~f~n~g~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~~~~g~~~~~~~~-p-v-~~~~~~~eE~FGPVl~v~~~~~~ 608 (715)
+|+|.|+|+|+|++|+|||++|| |+|+++|+++++++|+++.++.+...++ | + ++|++++||+||||++|++|+|+
T Consensus 242 ~~~f~n~G~C~a~~rv~V~~si~-d~f~~~l~~~~~~~ga~~~~g~~~~~~~~ptv~~d~~i~~eE~FGPVl~v~~~~~~ 320 (406)
T cd07079 242 NAKTQRPSVCNALETLLVHRDIA-EEFLPKLAEALREAGVELRGDEETLAILPGAKPATEEDWGTEYLDLILAVKVVDSL 320 (406)
T ss_pred HcccCCCcccccceeEEEeHHHH-HHHHHHHHHHHHHCCCEEecCHHHHHhcccccCCCcchhhhhhhCceeEEEEeCCH
Confidence 99999988999999999999999 7999999999999998887665433355 4 5 57899999999999999999999
Q ss_pred HHHHHHHHhcCCCceeEEEecCHHHHHHHHHhcCcceEEEcCCCCCCCCCccCCcccccccccccccccccccccceEEE
Q 005074 609 RAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTR 688 (715)
Q Consensus 609 deAi~~aN~~~~GL~a~i~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~~~pfG~g~~sG~~~~~~~~~g~~gl~~ft~~K 688 (715)
||||+++|+++|||++||||+|.++++++++++++|+|+||+++...+.+|||++++||+|+|.++++|++|+++||+.|
T Consensus 321 deAi~~aN~~~~GLsa~ift~d~~~a~~~~~~~~~G~v~iN~~~~~~~~~pfg~~~~sG~~~~~g~~~g~~~l~~~~~~k 400 (406)
T cd07079 321 DEAIAHINRYGSGHTEAIVTENYETAERFLREVDSAAVYVNASTRFTDGGEFGLGAEIGISTQKLHARGPMGLEELTTYK 400 (406)
T ss_pred HHHHHHHHHhCCccccEeeeCCHHHHHHHHHhCCeeEEEEeCCCcccCCCccccceeeeeecCCCcCCCCcChHHhcEEE
Confidence 99999999999999999999999999999999999999999987766778999999999976666788999999999999
Q ss_pred EEEEc
Q 005074 689 WILRG 693 (715)
Q Consensus 689 ~v~~~ 693 (715)
+++++
T Consensus 401 ~i~~~ 405 (406)
T cd07079 401 YIVRG 405 (406)
T ss_pred EEEeC
Confidence 99875
No 5
>KOG2451 consensus Aldehyde dehydrogenase [Energy production and conversion]
Probab=100.00 E-value=2.6e-82 Score=642.79 Aligned_cols=399 Identities=16% Similarity=0.188 Sum_probs=352.2
Q ss_pred HHHHHcCCcceeEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHh
Q 005074 267 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 346 (715)
Q Consensus 267 l~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~ 346 (715)
+.||.+|+.+|.+...+ -++.++||++|.+||.+|++++..||.++|+++.++|.+|+++|++.++.|.+|+
T Consensus 43 V~nPa~geii~~V~~~~------V~e~~kAI~aA~EaF~s~~~~takeRs~lLrkwy~Li~en~ddLa~iiTlE~GKp-- 114 (503)
T KOG2451|consen 43 VDNPANGEIIGKVADMT------VEEAEKAIDAAYEAFKSYRNLTAKERSALLRKWYELIMENKDDLATIITLENGKP-- 114 (503)
T ss_pred ccCCCccchhhcccCCc------HHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhchHHHHHHHhhhcCCc--
Confidence 47789999999998888 7899999999999999999999999999999999999999999999998665433
Q ss_pred hchhHHHHHHhhcChhHHHHHHHHHHHHhcccc-cccccccccccCCCeEEEEeeeceeEEEEEcCC-Chh-hHHHHHHH
Q 005074 347 AGYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 423 (715)
Q Consensus 347 ~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ 423 (715)
+.| ...|+.+....+++|++.++ ..|...++. .+..+..+.++|+||+++|+|| ||. +..+|+++
T Consensus 115 --L~e--------A~gEv~y~a~f~eWyAeEA~RvyGdii~s~--~~~rr~i~ikQPvGV~alItPWNFP~AMItRK~gA 182 (503)
T KOG2451|consen 115 --LGE--------AKGEVAYSAAFFEWYAEEARRVYGDIIPSL--NPNRRLIVIKQPVGVVALITPWNFPAAMITRKAGA 182 (503)
T ss_pred --hhh--------ccceeehhHHHHHHHHHHhhhhhccccCCC--CCCceEEEEeccceeEEEecCcCChHHHHHhHHHH
Confidence 122 24578888889999987664 467776532 2456778999999999999999 685 66799999
Q ss_pred HHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC----cchhhHhhcCCCCccEEEeecCHHHHHHHH
Q 005074 424 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS----REEIPDLLKLDDVIDLVIPRGSNKLVSQIK 498 (715)
Q Consensus 424 ALaaGN~vvlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~----~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~ 498 (715)
||++|||||+|||++||++++.++++-.+ | +|+|++|+++. ..+.+..|+.+|+|++|+|||||.+||.++
T Consensus 183 ALAaGCTvVvkPs~~TPlsaLala~lA~~----AGiP~Gv~NVit~~~~~a~eig~~lctsp~VrkisFTGST~VGKiL~ 258 (503)
T KOG2451|consen 183 ALAAGCTVVVKPSEDTPLSALALAKLAEE----AGIPAGVLNVITADASNAAEIGKELCTSPDVRKISFTGSTNVGKILM 258 (503)
T ss_pred HHhcCceEEEccCCCCchHHHHHHHHHHH----cCCCCcceEEEecCCCChHHHHHHhhcCCceeeEEeeccchHHHHHH
Confidence 99999999999999999999999999887 8 99999999982 347899999999999999999999999999
Q ss_pred hhcC---CCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccCchhHHHHHHHHHhcCCe--
Q 005074 499 ESTK---IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGVG-- 572 (715)
Q Consensus 499 ~~a~---~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~f~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~~-- 572 (715)
+++. |++.||||||.|+||++|||||+|++..+..+|.|+| +|.+++|+|||++|| |+|+.+|.++++++.+.
T Consensus 259 ~qsastvKkvslELGGNAPfIVFddadld~Av~g~mA~KFr~~GQtCVcaNR~yVh~~iy-D~Fv~~l~e~vkkl~vGdG 337 (503)
T KOG2451|consen 259 AQSASTVKKVSLELGGNAPFIVFDDADLDQAVEGAMACKFRNSGQTCVCANRVYVHDSIY-DKFVSKLAEAVKKLKVGDG 337 (503)
T ss_pred HhhhhhhhheehhhcCCCceEEecCcCHHHHHHHHHHhhhccCCceeEecceeEEehhhH-HHHHHHHHHHHHheeccCC
Confidence 8874 9999999999999999999999999999999999987 999999999999999 79999999999987321
Q ss_pred --------------------------------E-ecCcccc----ccc-c-C-----CCCCCccccccCceEEEEEeCCH
Q 005074 573 --------------------------------L-FGGPRAS----KLL-Q-I-----PETRLFHHEYNSMVCTVEIVDDV 608 (715)
Q Consensus 573 --------------------------------~-~g~~~~~----~~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~ 608 (715)
+ +||.+.. .+| | | .+|.+..||+|||+.+|++|+|+
T Consensus 338 ~~~~tt~GpLIne~av~Kve~~v~DAvsKga~ii~GGk~~~~lg~~fyePTvl~~V~~~m~~s~eEtFGPla~v~kFdte 417 (503)
T KOG2451|consen 338 LDPGTTQGPLINEKAVEKVEKHVEDAVSKGAKIILGGKERSELGPTFYEPTVLSNVTQNMLVSSEETFGPLASVFKFDTE 417 (503)
T ss_pred CCCCCccCCccCHHHHHHHHHHHHHHHhcCCeEEeCCeEccccCCccccceEeecCCccceeeccccccccceeeeeCCH
Confidence 1 2333111 123 5 2 35889999999999999999999
Q ss_pred HHHHHHHHhcCCCceeEEEecCHHHHHHHHHhcCcceEEEcCCCCCCCCCccCCcccccccccccccccccccccceEEE
Q 005074 609 RAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTR 688 (715)
Q Consensus 609 deAi~~aN~~~~GL~a~i~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~~~pfG~g~~sG~~~~~~~~~g~~gl~~ft~~K 688 (715)
||+|+.|||++.||++|+||+|..+..+++++|++|+|-+|.........||||.++||+| ++++.+|+++|+.+|
T Consensus 418 eEvi~~ANdt~vGLAgYvfs~~~s~~~rVae~LEvGmVGvNeglis~~~~pFGGVKeSG~G----REgskyGidey~~ik 493 (503)
T KOG2451|consen 418 EEVIEWANDTRVGLAGYVFSNNLSRLFRVAEALEVGMVGVNEGLISDAEAPFGGVKESGFG----REGSKYGIDEYLVIK 493 (503)
T ss_pred HHHHHHhccCccceeeEEeccCHHHHHHHHHHHhcceeecccceecccccCcCCccccccC----ccccccchhhhhhhh
Confidence 9999999999999999999999999999999999999999998888888999999999996 467899999999999
Q ss_pred EEEEcC
Q 005074 689 WILRGN 694 (715)
Q Consensus 689 ~v~~~~ 694 (715)
++.++.
T Consensus 494 ~icig~ 499 (503)
T KOG2451|consen 494 YICIGT 499 (503)
T ss_pred eeeecC
Confidence 998864
No 6
>KOG2450 consensus Aldehyde dehydrogenase [Energy production and conversion]
Probab=100.00 E-value=1e-82 Score=676.65 Aligned_cols=400 Identities=17% Similarity=0.211 Sum_probs=353.3
Q ss_pred HHHHcCCcceeEEecCCcccccHhhHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
Q 005074 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSR--RLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQ 345 (715)
Q Consensus 268 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~ 345 (715)
.+|.+|+.++++..++ .+||++|+++||+||+ .|++++..+|.++|+++|+++++++++|+...+.|-+++
T Consensus 41 ~nP~tg~~i~~v~~~~------~~dVd~aV~aAr~Af~~~~W~~~~~~~R~~~L~~~Adlie~~~~~lA~~E~~d~GKp- 113 (501)
T KOG2450|consen 41 VNPATGEVIAKVAEAT------EEDVDEAVKAARSAFKLVDWAKRDAAERGRLLRKLADLIEQDADVLAALEVLDNGKP- 113 (501)
T ss_pred ecCCCCCeEEEecccc------HHHHHHHHHHHHHhcCcCccccCCHHHHHHHHHHHHHHHHhhhHHHhhhcccccCCc-
Confidence 4577888899998888 8999999999999999 799999999999999999999999999999877664433
Q ss_pred hhchhHHHHHHhhcChhHHHHHHHHHHHHhcccccc-cccccccccCCCeEEEEeeeceeEEEEEcCCC-hh-hHHHHHH
Q 005074 346 EAGYAKSLVSRLALKPGKISSLAKSIRILADMEEPI-GQILKRTELADGLILEKTSCPLGVLLIVFESR-PD-ALVQIAS 422 (715)
Q Consensus 346 ~~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~~-P~-~~~~~~~ 422 (715)
+.+++ ..++..+++.+++++++++.. +...+ .+.+...|++++|+|||+.|+||+ |. +..||++
T Consensus 114 ---~~~a~-------~~Dl~~~~~~~ry~ag~ad~~~~~~~~---~~~~~~~yt~~eP~GV~G~I~pWN~Pllm~awKla 180 (501)
T KOG2450|consen 114 ---YPEAL-------VSDLPPAIDCFRYYAGWADKIHGSTIP---TDGEFFAYTRREPIGVCGQIIPWNFPLLMQAWKLA 180 (501)
T ss_pred ---chhhh-------hcCchhhhhHHHhhccchhhcccccCC---CCCceEEEecCCcceeeeEeccCchHHHHHHHhhh
Confidence 22322 136888999999999888544 44332 134567899999999999999994 85 5679999
Q ss_pred HHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-cchhhHhhcCCCCccEEEeecCHHHHHHHHhh
Q 005074 423 LAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKES 500 (715)
Q Consensus 423 ~ALaaGN~vvlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~ 500 (715)
|||++||+||+||||+||+|++.+++++.+ + +|+||+|+|+| +.++++.|.+||+|++|+||||+.+|+.|+++
T Consensus 181 PALa~GNtvV~Kpae~tplsal~~~~l~~e----aG~P~GVvNii~G~G~~aG~al~sH~dv~kiaFTGSt~~G~~I~~a 256 (501)
T KOG2450|consen 181 PALAAGNTVVLKPAEQTPLTALYLASLCKE----AGFPPGVVNIVPGSGTTAGAALASHPDVDKVAFTGSTPVGKEIMEA 256 (501)
T ss_pred hHHhhCcEEEecCCCCCCchHHHHHHHhHH----hcCCcceEEEccCCCchHHHHHhhCCCCceEEecCCCcchhHHhhh
Confidence 999999999999999999999999999987 8 99999999996 78899999999999999999999999999988
Q ss_pred cC----CCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccCchhHHHHHHHHHh-cCC---
Q 005074 501 TK----IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQH-EGV--- 571 (715)
Q Consensus 501 a~----~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~f~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~-~~~--- 571 (715)
++ ||++||||||+|.||++|||+|.|++.+..+.|+|.| +|++.+|+|||++|| |+|+++++++.++ +.+
T Consensus 257 aa~~n~K~vtLElGGKsp~Ivf~Dadld~av~~~~~~iF~nqGq~C~a~sR~~Vqe~iy-defv~~~v~~a~~~~kvGdP 335 (501)
T KOG2450|consen 257 AAESNLKPVTLELGGKSPIIVFDDADLDLAVENAAFGIFFNQGQCCTAGSRVFVQESIY-DEFVEKFVAAAKKKLKVGDP 335 (501)
T ss_pred hhhcCCceeccccCCCCcceEecccchHHHHHHHHHHhhcccccccccCceeEEechHH-HHHHHHHHHHHhcccccCCC
Confidence 73 9999999999999999999999999999999999987 999999999999999 7999999999865 422
Q ss_pred -------------------------------eE-ecCccc--cccc--c-C-----CCCCCccccccCceEEEEEeCCHH
Q 005074 572 -------------------------------GL-FGGPRA--SKLL--Q-I-----PETRLFHHEYNSMVCTVEIVDDVR 609 (715)
Q Consensus 572 -------------------------------~~-~g~~~~--~~~~--p-v-----~~~~~~~eE~FGPVl~v~~~~~~d 609 (715)
++ +|+.+. .++| | | ++|.|++||+||||++|++|++.|
T Consensus 336 ~~~~~~qG~~i~~~q~ekI~~yi~~~k~eGa~l~~gG~~~g~~Gyfi~Ptv~~~v~~~m~i~~EEIFGPVv~v~~F~t~e 415 (501)
T KOG2450|consen 336 FDEGTEQGPQISKTQYEKILGYIESGKKEGATLLCGGVRLGDKGYFIKPTVFTNVTDDMRIAKEEIFGPVVVVLKFKTEE 415 (501)
T ss_pred CCcccccccccCHHHHHHHHHHHHHHHhcCCEEEecCcccCCCceEECCeeccCCChhhhhhHhhccCceEEEEecCcHH
Confidence 11 244332 2344 5 3 469999999999999999999999
Q ss_pred HHHHHHHhcCCCceeEEEecCHHHHHHHHHhcCcceEEEcCCCCCCCCCccCCcccccccccccccccccccccceEEEE
Q 005074 610 AAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRW 689 (715)
Q Consensus 610 eAi~~aN~~~~GL~a~i~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~~~pfG~g~~sG~~~~~~~~~g~~gl~~ft~~K~ 689 (715)
|+|++||+++|||+++|||+|.++++++++++++|+||||++.......||||.++||+| ++.|.++++.||+.|+
T Consensus 416 E~i~~AN~t~yGLAa~V~t~dl~~a~~va~~l~aGtVwiN~y~~~~~~~PfgG~K~SG~G----RE~g~~~l~~ytevKt 491 (501)
T KOG2450|consen 416 EVIERANNTTYGLAAGVFTKDLDKAHRVANALQAGTVWINCYNVFDAQVPFGGFKMSGIG----RELGEYGLEAYTEVKT 491 (501)
T ss_pred HHHHHhcCCcccceeeEeccChHHHHHHHHHhcCceEEEeccccccccCCccccccccCC----ccccHHHHhhcceeeE
Confidence 999999999999999999999999999999999999999999988999999999999986 4679999999999999
Q ss_pred EEEcCcc
Q 005074 690 ILRGNGH 696 (715)
Q Consensus 690 v~~~~~~ 696 (715)
|+++.++
T Consensus 492 v~v~~~~ 498 (501)
T KOG2450|consen 492 VTVKLPQ 498 (501)
T ss_pred EEEeCCC
Confidence 9987653
No 7
>COG1012 PutA NAD-dependent aldehyde dehydrogenases [Energy production and conversion]
Probab=100.00 E-value=2.4e-79 Score=681.98 Aligned_cols=397 Identities=22% Similarity=0.226 Sum_probs=340.9
Q ss_pred HHHHcCCcceeEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhh
Q 005074 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 347 (715)
Q Consensus 268 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~ 347 (715)
.+|.+|+.++++..++ .+|+++|+++|++||+.|+++++.+|.++|++++++|++|+++|+.+++.|.++..
T Consensus 19 ~nP~tg~~i~~~~~a~------~~dv~~Av~aA~~a~~~W~~~~~~eR~~iL~~~a~~l~~~~~ela~~~~~e~Gk~i-- 90 (472)
T COG1012 19 INPATGEVIATVPAAT------AEDVDAAVAAARAAFEAWSRLSAEERAAILRRIADLLEARAEELAALITLETGKPI-- 90 (472)
T ss_pred eCCCCCCEEeeecCCC------HHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH--
Confidence 5688999999999888 78999999999999999999999999999999999999999999999887764431
Q ss_pred chhHHHHHHhhcChhHHHHHHHHHHHHhcccc-cccccccccccCCCeEEEEeeeceeEEEEEcCC-Chh-hHHHHHHHH
Q 005074 348 GYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 424 (715)
Q Consensus 348 g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~A 424 (715)
.++. .++..+++.++++++..+ ..+...+. +.+...+++|+|+|||++|+|| ||. +.+|+++||
T Consensus 91 --~ea~--------~ei~~~~~~~~~~a~~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~k~apA 157 (472)
T COG1012 91 --SEAR--------GEIARAADFIRYYAEEARRLEGETIPT---DKGSKALVRREPLGVVGAITPWNFPLALAAWKLAPA 157 (472)
T ss_pred --HHHH--------HHHHHHHHHHHHHHHHHHHhcCCccCC---CCCcceEEEeecceEEEEECCCCCHHHHHHhhHHHH
Confidence 2222 246677777777765543 22332221 1145678999999999999998 686 678999999
Q ss_pred HHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-cchhhHhhcCCCCccEEEeecCHHHHHHHHhhc-
Q 005074 425 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST- 501 (715)
Q Consensus 425 LaaGN~vvlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a- 501 (715)
|++||+||+|||+.||+|+..+++++.+ + ||+|++|+|+| +.++++.|..||+|++|+||||+++|++|++.|
T Consensus 158 LaaGntVV~KPse~tp~sa~~l~~~~~~----aglP~Gv~nvv~g~~~~~g~~l~~~p~v~~i~FTGSt~~G~~i~~~Aa 233 (472)
T COG1012 158 LAAGNTVVLKPSEQTPLSALALAELAAE----AGLPAGVLNVVTGGGAEVGDALVAHPDVDAISFTGSTAVGRAIAAAAA 233 (472)
T ss_pred HHcCCEEEEECcccCcHHHHHHHHHHHH----hCCCCCeEEEEeCCCchHHHHHhcCCCCCEEEEECChHHHHHHHHHHh
Confidence 9999999999999999999999999987 6 99999999995 566889999999999999999999999999887
Q ss_pred --CCCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccCchhHHHHHHHHHh-cCC------
Q 005074 502 --KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQH-EGV------ 571 (715)
Q Consensus 502 --~~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~f~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~-~~~------ 571 (715)
.||++||||||||+||++|||+|.|++.+++|+|.|+| +|+|.+|+|||+++| |+|+++|.++ ++ +.+
T Consensus 234 ~~~k~~~lELGGk~p~IV~~dAdl~~Av~~~~~g~f~n~GQ~C~a~~R~~V~~~v~-d~f~~~l~~~-~~~l~~Gd~~d~ 311 (472)
T COG1012 234 ANLKPVTLELGGKSPAIVLEDADLDAAVDAAVFGAFFNAGQRCTAASRLIVHESVY-DEFVERLVAR-AASLKVGDPLDP 311 (472)
T ss_pred hcCCcEEEECCCCCCeEECCCCCHHHHHHHHHHHHHhCCCCCccCCeEEEEehhhH-HHHHHHHHHH-HhcCCCCCCCCC
Confidence 39999999999999999999999999999999999987 999999999999999 7999999999 76 211
Q ss_pred ----------------------------eE-ecCccccccc--c-C-----CCCCCccccccCceEEEEEeCCHHHHHHH
Q 005074 572 ----------------------------GL-FGGPRASKLL--Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDH 614 (715)
Q Consensus 572 ----------------------------~~-~g~~~~~~~~--p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~ 614 (715)
.+ .|+.+..++| | | ++|++++||+||||++|++|+|+||||++
T Consensus 312 ~t~~Gpli~~~~~~~v~~~i~~a~~~G~~~~~Gg~~~~g~~~~PTv~~~v~~~~~i~~eEiFGPVl~v~~~~~~dEAi~l 391 (472)
T COG1012 312 STDLGPLISEEQLDRVEGYIEDAVAEGARLLAGGKRPGGYFVEPTILEGVTPDMRIAREEIFGPVLPVIRFKDEEEAIEL 391 (472)
T ss_pred CCccCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCcCCCCeEECCEEEecCCCCChhhhccccCCceEEEEeCCHHHHHHH
Confidence 01 1222212333 5 3 46899999999999999999999999999
Q ss_pred HHhcCCCceeEEEecCHHHHHHHHHhcCcceEEEcCCCC--CCCCCccCCcccccccccccccccccccccceEEEEEEE
Q 005074 615 IHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTR--FCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILR 692 (715)
Q Consensus 615 aN~~~~GL~a~i~t~d~~~~~~~~~~l~~G~V~iN~~~~--~~~~~pfG~g~~sG~~~~~~~~~g~~gl~~ft~~K~v~~ 692 (715)
+|+++|||++||||+|..++.++++++++|+|+||+... .....||||.+.||+| +++|.+|+++|++.|++..
T Consensus 392 AN~t~yGL~a~v~t~d~~~~~~~~~~l~aG~v~iN~~~~~~~~~~~PFGG~k~SG~G----~~~g~~~~~~~~~~k~v~~ 467 (472)
T COG1012 392 ANDTEYGLAAAIFTRDLARAFRVARRLEAGMVGINDYTGGADIAYLPFGGVKQSGLG----REGGKYGLEEFTEVKTVTI 467 (472)
T ss_pred HhCCCCCceEEEEcCCHHHHHHHHhcCCeeEEEECCCCCCCCCCCCCCCCcccccCC----ccchHHHHHHHhcceEEEE
Confidence 999999999999999999999999999999999998853 3466899999999986 3568999999999999987
Q ss_pred cCc
Q 005074 693 GNG 695 (715)
Q Consensus 693 ~~~ 695 (715)
...
T Consensus 468 ~~~ 470 (472)
T COG1012 468 KLG 470 (472)
T ss_pred ecC
Confidence 643
No 8
>TIGR00407 proA gamma-glutamyl phosphate reductase. The prosite motif begins at residue 332 of the seed alignment although not all of the members of the family exactly obey the motif.
Probab=100.00 E-value=1.5e-78 Score=662.62 Aligned_cols=388 Identities=44% Similarity=0.733 Sum_probs=346.2
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhhchhHHHHHHhhcChhHHHHHHHHHHHHhcccc
Q 005074 300 ARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRILADMEE 379 (715)
Q Consensus 300 A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 379 (715)
|++||+.|+++|.++|.++|++++++|++|+++|++++++|+..++|+|++..+.+++..+..+++.+++.++++++..+
T Consensus 1 a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~a~~~E~Gk~~~~~~~l~~a~~ev~~~~~~~~~~a~~a~ 80 (398)
T TIGR00407 1 AKQAANILAQLSTAEKNDALSKIADGLEAQAPAILAANAKDIAVAKENGLADALLDRLLLTEGRLKGIADGVKDVIELAD 80 (398)
T ss_pred ChhHHHHHHhCCHHHHHHHHHHHHHHHHhChHHHHHHhHHHHHHHHHcCCCHHHHHHHcCCHHHHHHHHHHHHHHhcCCC
Confidence 58899999999999999999999999999999999998889888889998765555566667799999999999998776
Q ss_pred cccccccccccCCCeEEEEeeeceeEEEEEcCCChhhHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-c
Q 005074 380 PIGQILKRTELADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-V 458 (715)
Q Consensus 380 ~~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~~P~~~~~~~~~ALaaGN~vvlKps~~tp~t~~~l~~~~~~al~~a-l 458 (715)
..|+..+.....++...+++|+|+|||++|+||||++++++++|||++||+||+|||+.||+|+..+++++++++.++ |
T Consensus 81 ~~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~pw~p~~~~~~~~~ALaaGN~vVlKps~~tp~~~~~l~~~~~~al~eaGl 160 (398)
T TIGR00407 81 PVGKVIDGRELDSGLTLERVRVPLGVLGVIYEARPNVTVDIASLCLKTGNAVILRGGKEAVRSNKALVEVIQDALAQTGL 160 (398)
T ss_pred CCcccccceecCCCceEEEEEeCcEEEEEEeCCCchHHHHHHHHHHHhCCeEEECCChhhHHHHHHHHHHHHHHHHHcCC
Confidence 666544321112355678899999999999999988889999999999999999999999999999999999888889 9
Q ss_pred CcCceEEecC-c-chhhHhhcCCCCccEEEeecCHHHHHHHHhhcCCCEEEecCCcceEEEcCCCCHHHHHHHHHhhccC
Q 005074 459 GEKLIGLVTS-R-EEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKID 536 (715)
Q Consensus 459 P~gvv~vv~~-~-~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a~~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~f~ 536 (715)
|+|+||+|++ + ++++++|..||+||+|+||||+.+|+.+++.+++|+++|||||||+||++|||||+|++.+++|+|+
T Consensus 161 P~gvv~~v~g~~~~~~~~~l~~~~~v~~v~fTGs~~vg~~~~~~~~~~~~~e~gGk~p~iV~~dADl~~Aa~~iv~~~~~ 240 (398)
T TIGR00407 161 PVGAVQLIETPSRELVSELLDLDEYIDLLIPRGGNGLVRLIKQTSTIPVLGHGDGICHIYLDESADLIKAIKVIVNAKTQ 240 (398)
T ss_pred ChhHEEEecCCCHHHHHHHHhCCCCeeEEEecCCHHHHHHHHHhCCCCEEEecCCcceEEEeCCCCHHHHHHHHHhhhcC
Confidence 9999999995 4 4588999999999999999999999999888789999999999999999999999999999999998
Q ss_pred CCccccccceEEEcCcccCchhHHHHHHHHHhcCCeEecCccccccc----c-C--CCCCCccccccCceEEEEEeCCHH
Q 005074 537 YPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLL----Q-I--PETRLFHHEYNSMVCTVEIVDDVR 609 (715)
Q Consensus 537 n~g~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~~~~g~~~~~~~~----p-v--~~~~~~~eE~FGPVl~v~~~~~~d 609 (715)
|+|+|+|++|+|||++|| |+|+++|+++++++++.+........++ | + .++++|+||+||||++|++|+|+|
T Consensus 241 ~GQ~C~a~~rv~V~~~v~-d~f~~~l~~~~~~~~~~~~~~~~i~~~v~~g~~tv~~~~~~i~~eE~FgPvl~v~~~~~~~ 319 (398)
T TIGR00407 241 RPSTCNAIETLLVNKAIA-REFLPVLENQLLEKGVTIHADAYALKLLELGPATEAIVCKTDFDKEFLSLDLSVKIVESLE 319 (398)
T ss_pred CCCcccccceEEEeHHHH-HHHHHHHHHHHHhcCCEEecCHHHHHHHhccCccccccccccccchhhCceeEEEEECCHH
Confidence 766999999999999999 7999999999998876542211111222 2 2 257899999999999999999999
Q ss_pred HHHHHHHhcCCCceeEEEecCHHHHHHHHHhcCcceEEEcCCCCCCCCCccCCcccccccccccccccccccccceEEE
Q 005074 610 AAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTR 688 (715)
Q Consensus 610 eAi~~aN~~~~GL~a~i~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~~~pfG~g~~sG~~~~~~~~~g~~gl~~ft~~K 688 (715)
|||+++|+++|||++||||+|.+++++|++++++|+|+||+++.+.+..|||.|.+.|+|+++.|.+|+.+++.||+.|
T Consensus 320 eAi~~aN~~~~GL~a~I~t~d~~~a~~~a~~i~~G~v~iN~~~~~~~~~pfG~~~~~~~~~~~~~~rg~~~~~~~~~~~ 398 (398)
T TIGR00407 320 AAIQHINQYGTQHSDAILTENKANAEQFQNGVDSAAVYHNASTRFTDGFRFGFGAEVGISTQKLHARGPMGLEALTSYK 398 (398)
T ss_pred HHHHHHHHhCCCCceEEEeCCHHHHHHHHHhCCeeEEEEeCCCCcCCCcccccceeeEEecCCCcCCCCcCHHHhcCCC
Confidence 9999999999999999999999999999999999999999998888889999999999999999999999999999875
No 9
>PRK11241 gabD succinate-semialdehyde dehydrogenase I; Provisional
Probab=100.00 E-value=7.4e-78 Score=675.36 Aligned_cols=398 Identities=17% Similarity=0.166 Sum_probs=342.0
Q ss_pred HHHHHcCCcceeEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHh
Q 005074 267 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 346 (715)
Q Consensus 267 l~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~ 346 (715)
..+|.+|+.++++..++ .+||++|+++|++||+.|+++|.++|.++|++++++|++|+++|++++.+|.+++..
T Consensus 30 v~nP~tg~~v~~~~~~~------~~~v~~av~~A~~a~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ 103 (482)
T PRK11241 30 VTNPANGDKLGSVPKMG------ADETRAAIDAANRALPAWRALTAKERANILRRWFNLMMEHQDDLARLMTLEQGKPLA 103 (482)
T ss_pred eECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHH
Confidence 35688999999998888 899999999999999999999999999999999999999999999998876654321
Q ss_pred hchhHHHHHHhhcChhHHHHHHHHHHHHhccccc-ccccccccccCCCeEEEEeeeceeEEEEEcCC-Chh-hHHHHHHH
Q 005074 347 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 423 (715)
Q Consensus 347 ~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ 423 (715)
++ ..|+..+++.+++++...+. .|...+.. ..+...+++|+|+|||++|+|| ||. +.+++++|
T Consensus 104 ----~a--------~~ev~~~~~~~~~~a~~~~~~~g~~~~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ 169 (482)
T PRK11241 104 ----EA--------KGEISYAASFIEWFAEEGKRIYGDTIPGH--QADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGP 169 (482)
T ss_pred ----HH--------HHHHHHHHHHHHHHHHHHHHhcCcccccC--CCCceEEEEEeeceEEEEECCCcChHHHHHHHHHH
Confidence 22 23677777777777654322 23322211 1233457889999999999998 685 56799999
Q ss_pred HHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-cchhhHhhcCCCCccEEEeecCHHHHHHHHhhc
Q 005074 424 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST 501 (715)
Q Consensus 424 ALaaGN~vvlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a 501 (715)
||++||+||+|||+.||+++..+++++.+ + +|+|++|+|+| +.++++.|..||+||+|+||||+++|++|++.+
T Consensus 170 ALaaGN~VVlKPs~~tp~~~~~l~~~~~~----aglP~gvv~vv~g~~~~~~~~l~~~~~v~~v~FTGS~~~G~~i~~~a 245 (482)
T PRK11241 170 ALAAGCTMVLKPASQTPFSALALAELAIR----AGIPAGVFNVVTGSAGAVGGELTSNPLVRKLSFTGSTEIGRQLMEQC 245 (482)
T ss_pred HHHhCCEEEEECCCCChHHHHHHHHHHHH----cCCCcccEEEEecCCchhHHHHhcCCCCCEEEEECcHHHHHHHHHHH
Confidence 99999999999999999999999999987 8 99999999996 566788888999999999999999999998877
Q ss_pred ---CCCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccCchhHHHHHHHHHhcCC------
Q 005074 502 ---KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------ 571 (715)
Q Consensus 502 ---~~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~f~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~------ 571 (715)
.||++||||||||+||++|||+|.|++.+++|+|.|+| +|+|++|||||++|| |+|+++|+++++++.+
T Consensus 246 a~~l~~~~lElGGknp~IV~~dADld~aa~~i~~~~f~~aGQ~C~a~~ri~V~~~i~-d~f~~~l~~~~~~l~~G~p~~~ 324 (482)
T PRK11241 246 AKDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVY-DRFAEKLQQAVSKLHIGDGLEK 324 (482)
T ss_pred HhcCCcEEEECCCCCeEEEcCCCCHHHHHHHHHHHHHhcCCCCCccCeEEEEeHHHH-HHHHHHHHHHHhhCCCCCCCCC
Confidence 48999999999999999999999999999999999987 999999999999999 7999999999987621
Q ss_pred ----------------------------eE-ecCccc--cccc--c-C-----CCCCCccccccCceEEEEEeCCHHHHH
Q 005074 572 ----------------------------GL-FGGPRA--SKLL--Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAI 612 (715)
Q Consensus 572 ----------------------------~~-~g~~~~--~~~~--p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi 612 (715)
++ .|+... .++| | | ++|++++||+||||++|++|+|+||||
T Consensus 325 ~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~GG~~~~~~g~f~~Ptvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eai 404 (482)
T PRK11241 325 GVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHELGGNFFQPTILVDVPANAKVAKEETFGPLAPLFRFKDEADVI 404 (482)
T ss_pred CCCcCCCCCHHHHHHHHHHHHHHHhCCCEEEecCCCCCCCCeEEeeEEEECCCCCChhhhCcCcCCEEEEEEeCCHHHHH
Confidence 12 233221 2333 6 2 368999999999999999999999999
Q ss_pred HHHHhcCCCceeEEEecCHHHHHHHHHhcCcceEEEcCCCCCCCCCccCCcccccccccccccccccccccceEEEEEEE
Q 005074 613 DHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILR 692 (715)
Q Consensus 613 ~~aN~~~~GL~a~i~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~~~pfG~g~~sG~~~~~~~~~g~~gl~~ft~~K~v~~ 692 (715)
+++|+++|||++||||+|.++++++++++++|+||||+.....+..||||.|.||+| +++|.+|+++||+.|+|++
T Consensus 405 ~~aN~s~~GL~a~Vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G----~~~g~~g~~~ft~~k~v~~ 480 (482)
T PRK11241 405 AQANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLG----REGSKYGIEDYLEIKYMCI 480 (482)
T ss_pred HHhhCCCCCceEEEEcCCHHHHHHHHHHcCccEEEECCCCCCCCCCCcCCccccccC----cccHHHHHHHhhcceEEEE
Confidence 999999999999999999999999999999999999987665567899999999986 3569999999999999876
Q ss_pred c
Q 005074 693 G 693 (715)
Q Consensus 693 ~ 693 (715)
+
T Consensus 481 ~ 481 (482)
T PRK11241 481 G 481 (482)
T ss_pred e
Confidence 4
No 10
>PLN02419 methylmalonate-semialdehyde dehydrogenase [acylating]
Probab=100.00 E-value=1.3e-77 Score=678.63 Aligned_cols=399 Identities=17% Similarity=0.195 Sum_probs=338.8
Q ss_pred HHHHcCCcceeEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhh
Q 005074 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 347 (715)
Q Consensus 268 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~ 347 (715)
.+|.+|+.++++..++ .+|+++|+++|++||+.|+++|.++|.++|++++++|++|+++|+.++.+|+||+..
T Consensus 134 ~nP~tg~~i~~v~~a~------~~dv~~Av~aA~~A~~~W~~~~~~eR~~iL~k~a~~L~~~~~ela~~~~~E~GKp~~- 206 (604)
T PLN02419 134 INPATQEVVSKVPLTT------NEEFKAAVSAAKQAFPLWRNTPITTRQRVMLKFQELIRKNMDKLAMNITTEQGKTLK- 206 (604)
T ss_pred ECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHH-
Confidence 5688999999999888 899999999999999999999999999999999999999999999998877765421
Q ss_pred chhHHHHHHhhcChhHHHHHHHHHHHHhcccc-cccccccccccCCCeEEEEeeeceeEEEEEcCC-Chh-hHHHHHHHH
Q 005074 348 GYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 424 (715)
Q Consensus 348 g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~A 424 (715)
++. .|+..+++.++++++..+ ..++..+.. ..+...+++|+|+|||++|+|| ||. +.+++++||
T Consensus 207 ---ea~--------~EV~~~i~~~~~~a~~a~~~~g~~~~~~--~~~~~~~~~reP~GVV~~I~PwNfPl~l~~~~iapA 273 (604)
T PLN02419 207 ---DSH--------GDIFRGLEVVEHACGMATLQMGEYLPNV--SNGVDTYSIREPLGVCAGICPFNFPAMIPLWMFPVA 273 (604)
T ss_pred ---HHH--------HHHHHHHHHHHHHHHHHHHhhCCccccc--CCCccceEEecCccEEEEECCCccHHHHHHHHHHHH
Confidence 221 256666666666654332 223222211 1233457889999999999998 685 577999999
Q ss_pred HHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecCcchhhHhhcCCCCccEEEeecCHHHHHHHHhhc--
Q 005074 425 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST-- 501 (715)
Q Consensus 425 LaaGN~vvlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a-- 501 (715)
|++||+||+|||+.||+++..+++++.+ + ||+|+||+|+|..++++.|..||+||+|+||||+++|+.|+++|
T Consensus 274 LaAGNtVVlKPSe~tp~ta~~l~~l~~e----AGlP~GvvnvV~G~~~~~~~L~~~~~Vd~V~FTGSt~vG~~I~~~Aa~ 349 (604)
T PLN02419 274 VTCGNTFILKPSEKDPGASVILAELAME----AGLPDGVLNIVHGTNDTVNAICDDEDIRAVSFVGSNTAGMHIYARAAA 349 (604)
T ss_pred HHcCCEEEEeCCCCCcHHHHHHHHHHHH----hCcCcceEEEEeCChHHHHHHHhCCCCCEEEEeCChHHHHHHHHHHhc
Confidence 9999999999999999999999999987 7 99999999996445677788899999999999999999999877
Q ss_pred -CCCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccCchhHHHHHHHHHhcCC--------
Q 005074 502 -KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV-------- 571 (715)
Q Consensus 502 -~~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~f~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~-------- 571 (715)
.||++||||||||+||++|||||.|++.+++|+|.|+| +|+|++|||||++ | |+|+++|+++++++.+
T Consensus 350 ~lk~v~LELGGknp~IV~~DADld~Aa~~iv~g~f~naGQ~C~A~~Rv~V~~~-~-d~f~e~l~~~~~~l~vG~p~d~~t 427 (604)
T PLN02419 350 KGKRIQSNMGAKNHGLVLPDANIDATLNALLAAGFGAAGQRCMALSTVVFVGD-A-KSWEDKLVERAKALKVTCGSEPDA 427 (604)
T ss_pred cCCcEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhhCCCCcCCCCEEEEeCc-H-HHHHHHHHHHHHHhccCCCCCCCC
Confidence 38999999999999999999999999999999999987 9999999999999 9 7999999999887621
Q ss_pred --------------------------eE-ecCccc------cc-cc-c-C-----CCCCCccccccCceEEEEEeCCHHH
Q 005074 572 --------------------------GL-FGGPRA------SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRA 610 (715)
Q Consensus 572 --------------------------~~-~g~~~~------~~-~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~de 610 (715)
++ .|+.+. .+ |+ | | ++|.+++||+||||++|++|+|+||
T Consensus 428 ~~GPlis~~~~~~v~~~i~~A~~~GAkvl~GG~~~~~~~~~~G~f~~PTVL~~v~~d~~i~~eEiFGPVl~V~~~~~~dE 507 (604)
T PLN02419 428 DLGPVISKQAKERICRLIQSGVDDGAKLLLDGRDIVVPGYEKGNFIGPTILSGVTPDMECYKEEIFGPVLVCMQANSFDE 507 (604)
T ss_pred CccCCCCHHHHHHHHHHHHHHHhcCCEEEeCCccccCCCCCCCeEEeeEEEeCCCCCCHHHcCCCcCCEEEEEecCCHHH
Confidence 22 243221 13 33 5 2 3689999999999999999999999
Q ss_pred HHHHHHhcCCCceeEEEecCHHHHHHHHHhcCcceEEEcCCCCC-CCCCccCCcccccccccccccccccccccceEEEE
Q 005074 611 AIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRF-CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRW 689 (715)
Q Consensus 611 Ai~~aN~~~~GL~a~i~t~d~~~~~~~~~~l~~G~V~iN~~~~~-~~~~pfG~g~~sG~~~~~~~~~g~~gl~~ft~~K~ 689 (715)
||+++|+++|||++||||+|.++++++++++++|+|+||+.... .+.+||||.|.||+|. .+++|.+|+++||+.|+
T Consensus 508 AI~laN~s~yGLaasVfT~d~~~a~~~a~~l~aG~V~IN~~~~~~~~~~PFGG~k~SG~G~--~~~~G~~gl~~ft~~K~ 585 (604)
T PLN02419 508 AISIINKNKYGNGAAIFTSSGAAARKFQMDIEAGQIGINVPIPVPLPFFSFTGNKASFAGD--LNFYGKAGVDFFTQIKL 585 (604)
T ss_pred HHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCeeeEEEcCCCCCCCCCCCcCCcCcCCCCC--CcccHHHHHHHhhCeEE
Confidence 99999999999999999999999999999999999999987433 3578999999999862 13469999999999999
Q ss_pred EEEcC
Q 005074 690 ILRGN 694 (715)
Q Consensus 690 v~~~~ 694 (715)
|++..
T Consensus 586 v~~~~ 590 (604)
T PLN02419 586 VTQKQ 590 (604)
T ss_pred EEEcc
Confidence 98865
No 11
>PLN02174 aldehyde dehydrogenase family 3 member H1
Probab=100.00 E-value=6.2e-77 Score=662.90 Aligned_cols=386 Identities=20% Similarity=0.214 Sum_probs=325.2
Q ss_pred HhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhhchhHHHHHHhhcChhHHHHHHH
Q 005074 290 QVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAK 369 (715)
Q Consensus 290 ~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~i~~~~~ 369 (715)
..|+++++++|++||++|+++|.++|.++|++++++|++|+|+|++++++|++++. .++...++....++++++++
T Consensus 9 ~~~v~~av~~a~~af~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~l~~e~GKp~----~~a~~~Ev~~~~~~~~~~~~ 84 (484)
T PLN02174 9 AADASILVTELRRSFDDGVTRGYEWRVTQLKKLMIICDNHEPEIVAALRDDLGKPE----LESSVYEVSLLRNSIKLALK 84 (484)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH----HHHHHHHHHHHHHHHHHHHH
Confidence 67999999999999999999999999999999999999999999999998886643 23333345555667777777
Q ss_pred HHHHHhcccccccccccccccCCCeEEEEeeeceeEEEEEcCC-Chh-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHH
Q 005074 370 SIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILH 447 (715)
Q Consensus 370 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGN~vvlKps~~tp~t~~~l~ 447 (715)
.++.|.+... ...... ..+...+++|+|+|||++|+|| ||. +++++++|||++||+||+||||.||+++.+++
T Consensus 85 ~~~~~~~~~~---~~~~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPse~tp~~~~~l~ 159 (484)
T PLN02174 85 QLKNWMAPEK---AKTSLT--TFPASAEIVSEPLGVVLVISAWNYPFLLSIDPVIGAISAGNAVVLKPSELAPASSALLA 159 (484)
T ss_pred HHHHHhcccc---cccccc--cCCcceEEEEecceEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHH
Confidence 7776643111 011111 1123457889999999999998 685 67899999999999999999999999999999
Q ss_pred HHHHHhcccccCcCceEEecCcchhhHhhcCCCCccEEEeecCHHHHHHHHhhc---CCCEEEecCCcceEEEcCCCCHH
Q 005074 448 KVITSAIPDTVGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST---KIPVLGHADGICHVYVDKSANLD 524 (715)
Q Consensus 448 ~~~~~al~~alP~gvv~vv~~~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a---~~~~~lElGGk~p~iV~~dADl~ 524 (715)
+++.+ +||+|+||+|+|+.+.+..|.+ |++|+|+||||+++|+.|+++| .||++||||||||+||++|||||
T Consensus 160 ~l~~~----~lp~gvv~vv~G~~~~~~~l~~-~~vd~V~FTGS~~~G~~I~~~aa~~l~~v~LELGGk~p~iV~~dADl~ 234 (484)
T PLN02174 160 KLLEQ----YLDSSAVRVVEGAVTETTALLE-QKWDKIFYTGSSKIGRVIMAAAAKHLTPVVLELGGKSPVVVDSDTDLK 234 (484)
T ss_pred HHHHH----hCCCCEEEEEECChHHHHHHhc-ccCCEEEEECChHHHHHHHHHHHhcCCcEEEecCCCCeEEEcCCCCHH
Confidence 99986 5999999999964334444554 7899999999999999999877 48999999999999999999999
Q ss_pred HHHHHHHhhcc-CCCc-cccccceEEEcCcccCchhHHHHHHHHHhcCC-------------------------------
Q 005074 525 VAKNIVIDAKI-DYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------------------------------- 571 (715)
Q Consensus 525 ~A~~~iv~~~f-~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~------------------------------- 571 (715)
.|++.+++|+| .|+| +|+|++|+|||+++| |+|+++|+++++++..
T Consensus 235 ~Aa~~i~~g~f~~n~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~G~p~~~~~~Gpli~~~~~~~v~~~i~~a~~g 313 (484)
T PLN02174 235 VTVRRIIAGKWGCNNGQACISPDYILTTKEYA-PKVIDAMKKELETFYGKNPMESKDMSRIVNSTHFDRLSKLLDEKEVS 313 (484)
T ss_pred HHHHHHHHHHhhCCCCCCCCcCcEEEEeHHHH-HHHHHHHHHHHHhhcCCCCcccCCcCCCCCHHHHHHHHHHHHHHHcC
Confidence 99999999999 5876 999999999999999 7999999999876521
Q ss_pred -eE-ecCccc-ccc-c-c-C-----CCCCCccccccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEecCHHHHHHHHHh
Q 005074 572 -GL-FGGPRA-SKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQ 640 (715)
Q Consensus 572 -~~-~g~~~~-~~~-~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~i~t~d~~~~~~~~~~ 640 (715)
++ .|+... .++ + | | ++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++++++
T Consensus 314 a~~~~GG~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~eai~~aN~~~~gLaa~vft~d~~~a~~~~~~ 393 (484)
T PLN02174 314 DKIVYGGEKDRENLKIAPTILLDVPLDSLIMSEEIFGPLLPILTLNNLEESFDVIRSRPKPLAAYLFTHNKKLKERFAAT 393 (484)
T ss_pred CEEEECCCcCCCCCEEEEEEEecCCCCChhhcCCcCCCeEEEecCCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHc
Confidence 11 243221 132 3 5 2 3689999999999999999999999999999999999999999999999999999
Q ss_pred cCcceEEEcCCCCCC--CCCccCCcccccccccccccccccccccceEEEEEEEcC
Q 005074 641 VDSAAVFHNASTRFC--DGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGN 694 (715)
Q Consensus 641 l~~G~V~iN~~~~~~--~~~pfG~g~~sG~~~~~~~~~g~~gl~~ft~~K~v~~~~ 694 (715)
+++|+|+||++.... +..||||.+.||+| +++|.+|+++||+.|+|.++.
T Consensus 394 l~aG~v~IN~~~~~~~~~~~PfGG~k~SG~G----r~~G~~gl~~ft~~K~v~~~~ 445 (484)
T PLN02174 394 VSAGGIVVNDIAVHLALHTLPFGGVGESGMG----AYHGKFSFDAFSHKKAVLYRS 445 (484)
T ss_pred CCcceEEECCCcCCCCCCCCCCCCcCccccC----ccchHHHHHHhcceEEEEECC
Confidence 999999999876543 56899999999986 356999999999999998864
No 12
>TIGR03374 ABALDH 1-pyrroline dehydrogenase. Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family.
Probab=100.00 E-value=3.1e-76 Score=661.89 Aligned_cols=398 Identities=14% Similarity=0.154 Sum_probs=338.5
Q ss_pred HHHHHcCCcceeEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHh
Q 005074 267 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 346 (715)
Q Consensus 267 l~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~ 346 (715)
..+|.+|+.++++..++ .+|+++++++|++||+.|+++|.++|.++|++++++|++|+++|++++++|++++..
T Consensus 20 v~~P~tg~~i~~~~~~~------~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ 93 (472)
T TIGR03374 20 VYNPATGEVILEIAEAS------AEQVDAAVRAADAAFAEWGQTTPKARAECLLKLADVIEENAQVFAELESRNCGKPLH 93 (472)
T ss_pred eECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHH
Confidence 35688999999999888 899999999999999999999999999999999999999999999998877655421
Q ss_pred hchhHHHHHHhhcChhHHHHHHHHHHHHhcccc-cccccccccccCCCeEEEEeeeceeEEEEEcCC-Chh-hHHHHHHH
Q 005074 347 AGYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 423 (715)
Q Consensus 347 ~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ 423 (715)
++. ..|+...++.++++++..+ ..+...+.. ..+...++.|+|+|||++|+|| ||. +.+++++|
T Consensus 94 ----~~~-------~~ev~~~~~~~~~~a~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ 160 (472)
T TIGR03374 94 ----SVF-------NDEIPAIVDVFRFFAGAARCLSGLAAGEY--LEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAP 160 (472)
T ss_pred ----HHH-------HHHHHHHHHHHHHHHHHHHHhcCcccCcc--CCCceEEEEEecceEEEEECCCCchHHHHHHHHHH
Confidence 111 1245555666665554322 112211111 1233567889999999999998 685 57899999
Q ss_pred HHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccccCcCceEEecC-cchhhHhhcCCCCccEEEeecCHHHHHHHHhhc-
Q 005074 424 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDTVGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST- 501 (715)
Q Consensus 424 ALaaGN~vvlKps~~tp~t~~~l~~~~~~al~~alP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a- 501 (715)
||++||+||+|||+.||+++..+++++.+ +||+|++|+|++ +.++++.|..||+||+|+||||+++|+.|++++
T Consensus 161 ALaaGN~VV~KPs~~tp~~~~~l~~l~~~----~lP~gv~~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa 236 (472)
T TIGR03374 161 ALAAGNCVVLKPSEITPLTALKLAELAKD----IFPAGVVNILFGRGKTVGDPLTGHEKVRMVSLTGSIATGEHILSHTA 236 (472)
T ss_pred HHhcCCEEEecCCCCCCHHHHHHHHHHHH----hCCcCeEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHh
Confidence 99999999999999999999999999975 499999999996 667888899999999999999999999998877
Q ss_pred --CCCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccCchhHHHHHHHHHhcCC-------
Q 005074 502 --KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------- 571 (715)
Q Consensus 502 --~~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~f~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~------- 571 (715)
.||++||||||||+||++|||+|.|++.+++++|.|+| +|+|++|+|||+++| |+|+++|+++++++.+
T Consensus 237 ~~~~~~~lElGGk~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-~~f~~~l~~~~~~l~~G~p~~~~ 315 (472)
T TIGR03374 237 PSIKRTHMELGGKAPVIVFDDADIDAVVEGVRTFGFYNAGQDCTAACRIYAQRGIY-DTLVEKLGAAVATLKSGAPDDES 315 (472)
T ss_pred hcccceEEecCCCCeeEECCCCCHHHHHHHHHHHHHhhcCCccccCCEEEEcHHHH-HHHHHHHHHHHhcCCCCCCCCCC
Confidence 39999999999999999999999999999999999987 999999999999999 7999999999887521
Q ss_pred ----------------------------eE-ecCccc--ccc-c-c-C-----CCCCCccccccCceEEEEEeCCHHHHH
Q 005074 572 ----------------------------GL-FGGPRA--SKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAI 612 (715)
Q Consensus 572 ----------------------------~~-~g~~~~--~~~-~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi 612 (715)
++ .|+... .++ + | | +++++++||+||||++|++|+|+||||
T Consensus 316 ~~~Gpli~~~~~~~v~~~i~~a~~~G~a~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai 395 (472)
T TIGR03374 316 TELGPLSSLAHLERVMKAVEEAKALGHIKVITGGEKRKGNGYYFAPTLLAGAKQDDAIVQKEVFGPVVSITSFDDEEQVV 395 (472)
T ss_pred CcCCCCCCHHHHHHHHHHHHHHHHcCCeEEEeCCccCCCCCeEEeeEEEeCCCCCChhhhCCccCceEEEEEECCHHHHH
Confidence 11 133221 133 3 5 2 368999999999999999999999999
Q ss_pred HHHHhcCCCceeEEEecCHHHHHHHHHhcCcceEEEcCCCCCCCCCccCCcccccccccccccccccccccceEEEEEEE
Q 005074 613 DHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILR 692 (715)
Q Consensus 613 ~~aN~~~~GL~a~i~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~~~pfG~g~~sG~~~~~~~~~g~~gl~~ft~~K~v~~ 692 (715)
+++|+++|||++||||+|.++++++++++++|+|+||+.....+.+||||.|.||+| +++|++|+++||+.|++++
T Consensus 396 ~~an~~~~gL~a~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G----~~~g~~~l~~~t~~k~i~~ 471 (472)
T TIGR03374 396 NWANDSQYGLASSVWTKDVGRAHRLSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYG----KDMSLYGLEDYTVVRHIMV 471 (472)
T ss_pred HHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccCccC----ccchHHHHHHhhceEEEEE
Confidence 999999999999999999999999999999999999988776778999999999986 3569999999999999875
No 13
>PLN02315 aldehyde dehydrogenase family 7 member
Probab=100.00 E-value=1.1e-75 Score=660.38 Aligned_cols=404 Identities=17% Similarity=0.209 Sum_probs=342.1
Q ss_pred hHHHHHcCCcceeEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
Q 005074 266 SIIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQ 345 (715)
Q Consensus 266 ~l~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~ 345 (715)
...+|.|++.++++..++ .+|+++|+++|++||+.|+++|.++|.++|++++++|++|+++|++++.+|++|+.
T Consensus 37 ~~~nP~t~~~i~~~~~a~------~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~GK~~ 110 (508)
T PLN02315 37 SSVNPANNQPIAEVVEAS------LEDYEEGLRACEEAAKIWMQVPAPKRGEIVRQIGDALRAKLDYLGRLVSLEMGKIL 110 (508)
T ss_pred eeECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCH
Confidence 346788999999998888 89999999999999999999999999999999999999999999999887765542
Q ss_pred hhchhHHHHHHhhcChhHHHHHHHHHHHHhcccc-cccccccccccCCCeEEEEeeeceeEEEEEcCC-Chh-hHHHHHH
Q 005074 346 EAGYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIAS 422 (715)
Q Consensus 346 ~~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~ 422 (715)
. ++ ..|+..+++.++++++..+ ..+...+. . ..+...+..|+|+|||++|+|| ||. +++++++
T Consensus 111 ~----~a--------~~ev~~~i~~~~~~~~~~~~l~~~~~~~-~-~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~ 176 (508)
T PLN02315 111 A----EG--------IGEVQEIIDMCDFAVGLSRQLNGSIIPS-E-RPNHMMMEVWNPLGIVGVITAFNFPCAVLGWNAC 176 (508)
T ss_pred H----HH--------HHHHHHHHHHHHHHHHHHHHhcCccccC-C-CCCceeEEEEecceEEEEECCCcchHHHHHHHHh
Confidence 1 22 1255566666666554322 12222221 1 1233446789999999999998 685 6789999
Q ss_pred HHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecCcchhhHhhcCCCCccEEEeecCHHHHHHHHhhc
Q 005074 423 LAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST 501 (715)
Q Consensus 423 ~ALaaGN~vvlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a 501 (715)
|||++||+||+|||+.||+++..+++++.+++.++ +|+|++|+|+++.++++.|..||+||+|+||||+++|+.|++.+
T Consensus 177 ~ALaaGN~VVlKPs~~tp~~~~~~~~l~~~~~~~aGlP~gvv~~v~g~~~~~~~l~~~~~v~~v~fTGS~~~G~~v~~~a 256 (508)
T PLN02315 177 IALVCGNCVVWKGAPTTPLITIAMTKLVAEVLEKNNLPGAIFTSFCGGAEIGEAIAKDTRIPLVSFTGSSKVGLMVQQTV 256 (508)
T ss_pred HHHHcCCEEEeeCCCcChHHHHHHHHHHHHHHHHcCCCcccEEEecCChHHHHHHhcCCCCCEEEEECCHHHHHHHHHHH
Confidence 99999999999999999999999888888888889 99999999997666788899999999999999999999998866
Q ss_pred ---CCCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccCchhHHHHHHHHHhcCCe-----
Q 005074 502 ---KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGVG----- 572 (715)
Q Consensus 502 ---~~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~f~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~~----- 572 (715)
.+|+++|||||||+||++|||+|.|++.+++|+|.|+| .|+|++|+|||++|| |+|+++|+++++++.+.
T Consensus 257 a~~~~~~~lElgGknp~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~l~vG~p~~~ 335 (508)
T PLN02315 257 NARFGKCLLELSGNNAIIVMDDADIQLAVRSVLFAAVGTAGQRCTTCRRLLLHESIY-DDVLEQLLTVYKQVKIGDPLEK 335 (508)
T ss_pred HhcCCCEEEecCCCCeEEECCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEeHHHH-HHHHHHHHHHHHhcCCCCCCCC
Confidence 38999999999999999999999999999999999986 999999999999999 79999999999876321
Q ss_pred -----------------------------E-ecCccc--cc-cc-c-C----CCCCCccccccCceEEEEEeCCHHHHHH
Q 005074 573 -----------------------------L-FGGPRA--SK-LL-Q-I----PETRLFHHEYNSMVCTVEIVDDVRAAID 613 (715)
Q Consensus 573 -----------------------------~-~g~~~~--~~-~~-p-v----~~~~~~~eE~FGPVl~v~~~~~~deAi~ 613 (715)
+ .|+... .+ ++ | | ++|++++||+||||++|++|+|+||||+
T Consensus 336 ~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~~~g~~~~Ptvl~v~~~~~i~~eE~FGPVl~V~~~~~~deai~ 415 (508)
T PLN02315 336 GTLLGPLHTPESKKNFEKGIEIIKSQGGKILTGGSAIESEGNFVQPTIVEISPDADVVKEELFGPVLYVMKFKTLEEAIE 415 (508)
T ss_pred CCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCCCeEEecEEEecCCCChHHhCCCcCCEEEEEEeCCHHHHHH
Confidence 1 133211 13 33 5 2 4689999999999999999999999999
Q ss_pred HHHhcCCCceeEEEecCHHHHHHHHH--hcCcceEEEcCCCCC-CCCCccCCcccccccccccccccccccccceEEEEE
Q 005074 614 HIHQHGSAHTDCIVAEDQKVAETFLC--QVDSAAVFHNASTRF-CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWI 690 (715)
Q Consensus 614 ~aN~~~~GL~a~i~t~d~~~~~~~~~--~l~~G~V~iN~~~~~-~~~~pfG~g~~sG~~~~~~~~~g~~gl~~ft~~K~v 690 (715)
++|+++|||++||||+|.++++++++ ++++|+|+||.++.. .+.+||||.|.||+| +++|.+|+++||+.|+|
T Consensus 416 ~aN~~~~gL~a~Vft~d~~~a~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G----~~~G~~~l~~ft~~k~v 491 (508)
T PLN02315 416 INNSVPQGLSSSIFTRNPETIFKWIGPLGSDCGIVNVNIPTNGAEIGGAFGGEKATGGG----REAGSDSWKQYMRRSTC 491 (508)
T ss_pred HHhCCCCCCeEEEEcCCHHHHHHHhhhcccceeEEEEcCCCCCCCCCCCCCccccccCC----ccchHHHHHHHhhEEEE
Confidence 99999999999999999999999985 799999999986544 467899999999986 35689999999999999
Q ss_pred EEcC
Q 005074 691 LRGN 694 (715)
Q Consensus 691 ~~~~ 694 (715)
++..
T Consensus 492 ~~~~ 495 (508)
T PLN02315 492 TINY 495 (508)
T ss_pred EEec
Confidence 8764
No 14
>PLN02766 coniferyl-aldehyde dehydrogenase
Probab=100.00 E-value=1.9e-75 Score=659.58 Aligned_cols=400 Identities=18% Similarity=0.186 Sum_probs=339.7
Q ss_pred HHHHHcCCcceeEEecCCcccccHhhHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
Q 005074 267 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSR--RLQALQSQDRRKILLDVADALEANESLIKVENEADVAAA 344 (715)
Q Consensus 267 l~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~ 344 (715)
..+|.+|+.++++...+ .+|+++|+++|++||+ .|+.+|.++|.++|++++++|++|+++|++++++|+++.
T Consensus 40 ~~~P~tg~~i~~~~~~~------~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~ 113 (501)
T PLN02766 40 TRDPRTGEVIARIAEGD------KEDVDLAVKAAREAFDHGPWPRMSGFERGRIMMKFADLIEEHIEELAALDTIDAGKL 113 (501)
T ss_pred eECCCCCCEEEEEeCCC------HHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCC
Confidence 36788999999999888 8999999999999998 599999999999999999999999999999988776543
Q ss_pred HhhchhHHHHHHhhcChhHHHHHHHHHHHHhccc-ccccccccccccCCCeEEEEeeeceeEEEEEcCC-Chh-hHHHHH
Q 005074 345 QEAGYAKSLVSRLALKPGKISSLAKSIRILADME-EPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIA 421 (715)
Q Consensus 345 ~~~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~ 421 (715)
.. ++.. .|+...++.++++++.. +..|+..+. ..+...+++|+|+|||++|+|| ||. +.++++
T Consensus 114 ~~----~a~~-------~ev~~~~~~l~~~a~~~~~~~g~~~~~---~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~ 179 (501)
T PLN02766 114 FA----LGKA-------VDIPAAAGLLRYYAGAADKIHGETLKM---SRQLQGYTLKEPIGVVGHIIPWNFPSTMFFMKV 179 (501)
T ss_pred HH----HHHH-------HHHHHHHHHHHHHHHHHHHhcCceecc---CCCceEEEEeccceEEEEECCCCChHHHHHHHH
Confidence 21 2211 24555566666655432 122332221 1233457889999999999998 685 567999
Q ss_pred HHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-cchhhHhhcCCCCccEEEeecCHHHHHHHHh
Q 005074 422 SLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKE 499 (715)
Q Consensus 422 ~~ALaaGN~vvlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~ 499 (715)
+|||++||+||+|||+.||+++..+++++.+ + ||+|++|+|++ +.++++.|..||+||+|+||||+.+||.|++
T Consensus 180 ~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~----aGlP~gvv~~v~g~~~~~~~~L~~~p~v~~V~FTGS~~~G~~i~~ 255 (501)
T PLN02766 180 APALAAGCTMVVKPAEQTPLSALFYAHLAKL----AGVPDGVINVVTGFGPTAGAAIASHMDVDKVSFTGSTEVGRKIMQ 255 (501)
T ss_pred HHHHHcCCEEEEeCCCCchHHHHHHHHHHHh----cCCCcCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHH
Confidence 9999999999999999999999999999986 8 99999999996 5678898999999999999999999999988
Q ss_pred hcC----CCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccCchhHHHHHHHHHhcCC---
Q 005074 500 STK----IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV--- 571 (715)
Q Consensus 500 ~a~----~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~f~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~--- 571 (715)
.+. +|+++|||||||+||++|||+|.|++.+++|+|.|+| +|+|++|+|||++|| |+|+++|+++++++.+
T Consensus 256 ~aa~~~l~~~~lElGGknp~iV~~dADl~~Aa~~i~~g~f~n~GQ~C~a~~ri~V~~si~-d~f~~~l~~~~~~l~~G~p 334 (501)
T PLN02766 256 AAATSNLKQVSLELGGKSPLLIFDDADVDMAVDLALLGIFYNKGEICVASSRVYVQEGIY-DEFVKKLVEKAKDWVVGDP 334 (501)
T ss_pred HhhhcCCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeEEEEcHHHH-HHHHHHHHHHHHhccCCCC
Confidence 663 7999999999999999999999999999999999986 999999999999999 7999999999887521
Q ss_pred -------------------------------eE-ecCccc--cc-cc-c-C-----CCCCCccccccCceEEEEEeCCHH
Q 005074 572 -------------------------------GL-FGGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVR 609 (715)
Q Consensus 572 -------------------------------~~-~g~~~~--~~-~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~d 609 (715)
++ .|+... .+ ++ | | +++++++||+||||++|++|+|+|
T Consensus 335 ~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~d 414 (501)
T PLN02766 335 FDPRARQGPQVDKQQFEKILSYIEHGKREGATLLTGGKPCGDKGYYIEPTIFTDVTEDMKIAQDEIFGPVMSLMKFKTVE 414 (501)
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCCCCCeEEeeEEEecCCCCChhhhCCccCceEEEEEeCCHH
Confidence 12 233221 23 33 5 2 368999999999999999999999
Q ss_pred HHHHHHHhcCCCceeEEEecCHHHHHHHHHhcCcceEEEcCCCCCCCCCccCCcccccccccccccccccccccceEEEE
Q 005074 610 AAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRW 689 (715)
Q Consensus 610 eAi~~aN~~~~GL~a~i~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~~~pfG~g~~sG~~~~~~~~~g~~gl~~ft~~K~ 689 (715)
|||+++|+++|||++||||+|.+++.++++++++|+|+||+.....+.+||||.|.||+| +++|++|+++||+.|+
T Consensus 415 eai~~aN~~~~GL~a~Vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G----~~~G~~~l~~ft~~k~ 490 (501)
T PLN02766 415 EAIKKANNTKYGLAAGIVTKDLDVANTVSRSIRAGTIWVNCYFAFDPDCPFGGYKMSGFG----RDQGMDALDKYLQVKS 490 (501)
T ss_pred HHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccCcCC----ccchHHHHHHHhceEE
Confidence 999999999999999999999999999999999999999987766677899999999986 3569999999999999
Q ss_pred EEEcCc
Q 005074 690 ILRGNG 695 (715)
Q Consensus 690 v~~~~~ 695 (715)
|++...
T Consensus 491 v~~~~~ 496 (501)
T PLN02766 491 VVTPLY 496 (501)
T ss_pred EEEecc
Confidence 988543
No 15
>PLN02278 succinic semialdehyde dehydrogenase
Probab=100.00 E-value=5.4e-75 Score=655.93 Aligned_cols=398 Identities=16% Similarity=0.184 Sum_probs=340.2
Q ss_pred HHHHHcCCcceeEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHh
Q 005074 267 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 346 (715)
Q Consensus 267 l~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~ 346 (715)
..+|.+|+.++++...+ ++|+++++++|++||+.|+++|.++|.++|++++++|++|+++|++++.+|++++..
T Consensus 44 v~~P~tg~~i~~~~~~~------~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ 117 (498)
T PLN02278 44 VYNPATGEVIANVPCMG------RAETNDAIASAHDAFPSWSKLTASERSKILRRWYDLIIANKEDLAQLMTLEQGKPLK 117 (498)
T ss_pred EECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH
Confidence 46789999999998888 899999999999999999999999999999999999999999999998877655421
Q ss_pred hchhHHHHHHhhcChhHHHHHHHHHHHHhccccc-ccccccccccCCCeEEEEeeeceeEEEEEcCC-Chh-hHHHHHHH
Q 005074 347 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 423 (715)
Q Consensus 347 ~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ 423 (715)
++. .|+..+++.++++++..+. .|...+.. ..+...+++|+|+|||++|+|| ||. +.+++++|
T Consensus 118 ----~a~--------~Ev~~~i~~~~~~~~~~~~~~g~~~~~~--~~~~~~~~~~~P~GvV~~I~PwN~P~~~~~~~i~~ 183 (498)
T PLN02278 118 ----EAI--------GEVAYGASFLEYFAEEAKRVYGDIIPSP--FPDRRLLVLKQPVGVVGAITPWNFPLAMITRKVGP 183 (498)
T ss_pred ----HHH--------HHHHHHHHHHHHHHHHHHHhcCcccccC--CCCceEEEEeecccEEEEECCCccHHHHHHHHHHH
Confidence 221 2566666666665543321 23322211 1233457789999999999998 685 56799999
Q ss_pred HHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-cchhhHhhcCCCCccEEEeecCHHHHHHHHhhc
Q 005074 424 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST 501 (715)
Q Consensus 424 ALaaGN~vvlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a 501 (715)
||++||+||+|||+.+|+++..+++++.+ + ||+|++|+|++ ++++++.|..||+||+|+||||+.+|+.|++.+
T Consensus 184 ALaaGN~VVlKps~~tp~~~~~l~~~l~e----aglP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~a 259 (498)
T PLN02278 184 ALAAGCTVVVKPSELTPLTALAAAELALQ----AGIPPGVLNVVMGDAPEIGDALLASPKVRKITFTGSTAVGKKLMAGA 259 (498)
T ss_pred HHHcCCEEEEECCCCChHHHHHHHHHHHH----cCCCcccEEEEecCChhhHHHHhcCCCcCEEEEECcHHHHHHHHHHH
Confidence 99999999999999999999999999886 7 99999999995 556788888999999999999999999999877
Q ss_pred C---CCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccCchhHHHHHHHHHhcCC------
Q 005074 502 K---IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------ 571 (715)
Q Consensus 502 ~---~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~f~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~------ 571 (715)
+ ||++||||||||+||++|||+|.|++.+++++|.|+| .|+|++|+|||+++| |+|+++|+++++++.+
T Consensus 260 a~~~~~~~lElGGk~~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~-~~f~~~L~~~~~~l~~G~p~~~ 338 (498)
T PLN02278 260 AATVKRVSLELGGNAPFIVFDDADLDVAVKGALASKFRNSGQTCVCANRILVQEGIY-DKFAEAFSKAVQKLVVGDGFEE 338 (498)
T ss_pred hhcCCcEEEecCCCCeeEECCCCCHHHHHHHHHHHHhccCCCCCcCCcEEEEeHHHH-HHHHHHHHHHHHhcCCCCCCCC
Confidence 3 8999999999999999999999999999999999987 999999999999999 7999999999887632
Q ss_pred ----------------------------eE-ecCccc--cc-cc-c-C-----CCCCCccccccCceEEEEEeCCHHHHH
Q 005074 572 ----------------------------GL-FGGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAI 612 (715)
Q Consensus 572 ----------------------------~~-~g~~~~--~~-~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi 612 (715)
++ .|+... .+ ++ | | +++++++||+||||++|++|+|+||||
T Consensus 339 ~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~~~g~~~~Ptvl~~v~~~~~~~~~E~FGPVl~v~~~~~~deai 418 (498)
T PLN02278 339 GVTQGPLINEAAVQKVESHVQDAVSKGAKVLLGGKRHSLGGTFYEPTVLGDVTEDMLIFREEVFGPVAPLTRFKTEEEAI 418 (498)
T ss_pred CCcCCCccCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCceEeeEEEecCCCCChhhhCCCcCCEEEEEeeCCHHHHH
Confidence 11 233221 12 33 5 2 368899999999999999999999999
Q ss_pred HHHHhcCCCceeEEEecCHHHHHHHHHhcCcceEEEcCCCCCCCCCccCCcccccccccccccccccccccceEEEEEEE
Q 005074 613 DHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILR 692 (715)
Q Consensus 613 ~~aN~~~~GL~a~i~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~~~pfG~g~~sG~~~~~~~~~g~~gl~~ft~~K~v~~ 692 (715)
+++|+++|||++||||+|.++++++++++++|+|+||+.....+.+||||.+.||+| +++|++|+++||+.|+|.+
T Consensus 419 ~~~N~~~~gL~a~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G----~~~G~~~l~~ft~~k~i~~ 494 (498)
T PLN02278 419 AIANDTEAGLAAYIFTRDLQRAWRVSEALEYGIVGVNEGLISTEVAPFGGVKQSGLG----REGSKYGIDEYLEIKYVCL 494 (498)
T ss_pred HHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCcCCcccCcCC----ccchHHHHHHhheeEEEEE
Confidence 999999999999999999999999999999999999987665567899999999985 3569999999999999987
Q ss_pred c
Q 005074 693 G 693 (715)
Q Consensus 693 ~ 693 (715)
+
T Consensus 495 ~ 495 (498)
T PLN02278 495 G 495 (498)
T ss_pred e
Confidence 4
No 16
>PRK13968 putative succinate semialdehyde dehydrogenase; Provisional
Probab=100.00 E-value=5e-75 Score=650.98 Aligned_cols=396 Identities=16% Similarity=0.215 Sum_probs=334.2
Q ss_pred HHHHHcCCcceeEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHh
Q 005074 267 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 346 (715)
Q Consensus 267 l~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~ 346 (715)
..+|.+|+.++++...+ .+++++++++|++||+.|++++.++|.++|++++++|++|+++|++++.+|.+++..
T Consensus 11 ~~nP~t~~~i~~~~~~~------~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ 84 (462)
T PRK13968 11 SVNPATGEQLSVLPWAG------ADDIENALQLAAAGFRDWRETNIDYRAQKLRDIGKALRARSEEMAQMITREMGKPIN 84 (462)
T ss_pred eECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhCCCHH
Confidence 35688999999999888 899999999999999999999999999999999999999999999998877765431
Q ss_pred hchhHHHHHHhhcChhHHHHHHHHHHHHhcccc-cccccccccccCCCeEEEEeeeceeEEEEEcCC-Chh-hHHHHHHH
Q 005074 347 AGYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 423 (715)
Q Consensus 347 ~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ 423 (715)
++. .|+..+++.+++++...+ ..+..... ..+...+++++|+|||++|+|| ||. +.+++++|
T Consensus 85 ----~a~--------~ev~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~GvV~~I~PwN~P~~~~~~~~~~ 149 (462)
T PRK13968 85 ----QAR--------AEVAKSANLCDWYAEHGPAMLKAEPTL---VENQQAVIEYRPLGTILAIMPWNFPLWQVMRGAVP 149 (462)
T ss_pred ----HHH--------HHHHHHHHHHHHHHHHHHHhhCCcccc---CCCceEEEEEeccceEEEEcCCchHHHHHHHHHHH
Confidence 221 244455555555443221 11111110 1234567889999999999998 585 56789999
Q ss_pred HHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-cchhhHhhcCCCCccEEEeecCHHHHHHHHhhc
Q 005074 424 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST 501 (715)
Q Consensus 424 ALaaGN~vvlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a 501 (715)
||++||+||+|||+.||+++..+++++.+ + ||+|++|+|++ +++.+. |..||+||+|+||||+++|++|++.+
T Consensus 150 ALaaGN~vv~KPs~~tp~~~~~l~~~~~~----aGlP~gv~~~v~g~~~~~~~-l~~~~~v~~V~fTGs~~~G~~i~~~a 224 (462)
T PRK13968 150 ILLAGNGYLLKHAPNVMGCAQLIAQVFKD----AGIPQGVYGWLNADNDGVSQ-MINDSRIAAVTVTGSVRAGAAIGAQA 224 (462)
T ss_pred HHHcCCEEEEECCCcChHHHHHHHHHHHH----cCcCcCcEEEEecCchhhHH-HhcCCCCCEEEEECCHHHHHHHHHHH
Confidence 99999999999999999999999999986 8 99999999995 444454 66789999999999999999999887
Q ss_pred ---CCCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccCchhHHHHHHHHHhcCC------
Q 005074 502 ---KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------ 571 (715)
Q Consensus 502 ---~~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~f~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~------ 571 (715)
.||++||||||||+||++|||+|.|++.+++++|.|+| .|+|++|+|||++|| |+|+++|+++++++.+
T Consensus 225 a~~l~~~~lElGGk~p~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-~~f~~~l~~~~~~~~~g~p~~~ 303 (462)
T PRK13968 225 GAALKKCVLELGGSDPFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIIEEGIA-SAFTERFVAAAAALKMGDPRDE 303 (462)
T ss_pred hhcCCcEEEecCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEECHhHH-HHHHHHHHHHHhcCCcCCCCCC
Confidence 48999999999999999999999999999999999987 999999999999999 7999999999987632
Q ss_pred ----------------------------eE-ecCccc--cc-cc-c-C-----CCCCCccccccCceEEEEEeCCHHHHH
Q 005074 572 ----------------------------GL-FGGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAI 612 (715)
Q Consensus 572 ----------------------------~~-~g~~~~--~~-~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi 612 (715)
++ +|+... .+ ++ | | +++++++||+||||++|++|+|+||||
T Consensus 304 ~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~d~~eai 383 (462)
T PRK13968 304 ENALGPMARFDLRDELHHQVEATLAEGARLLLGGEKIAGAGNYYAPTVLANVTPEMTAFREELFGPVAAITVAKDAEHAL 383 (462)
T ss_pred CCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCceEECCEEEeCCCCCChHHhCCCcCCEEEEEEECCHHHHH
Confidence 11 233221 12 33 5 2 357899999999999999999999999
Q ss_pred HHHHhcCCCceeEEEecCHHHHHHHHHhcCcceEEEcCCCCCCCCCccCCcccccccccccccccccccccceEEEEEEE
Q 005074 613 DHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILR 692 (715)
Q Consensus 613 ~~aN~~~~GL~a~i~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~~~pfG~g~~sG~~~~~~~~~g~~gl~~ft~~K~v~~ 692 (715)
+++|+++|||++||||+|.+++.++++++++|+|+||+.....+.+||||.+.||+| +++|++|+++||+.|+|.+
T Consensus 384 ~~~n~~~~gLs~~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G----~~~G~~~l~~ft~~k~v~~ 459 (462)
T PRK13968 384 ELANDSEFGLSATIFTTDETQARQMAARLECGGVFINGYCASDARVAFGGVKKSGFG----RELSHFGLHEFCNIQTVWK 459 (462)
T ss_pred HHHhCCCCcceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCccccccC----cCchHHHHHHhcceeEEEE
Confidence 999999999999999999999999999999999999988766677899999999986 3569999999999999976
Q ss_pred c
Q 005074 693 G 693 (715)
Q Consensus 693 ~ 693 (715)
.
T Consensus 460 ~ 460 (462)
T PRK13968 460 D 460 (462)
T ss_pred e
Confidence 4
No 17
>PRK09406 gabD1 succinic semialdehyde dehydrogenase; Reviewed
Probab=100.00 E-value=7e-75 Score=648.94 Aligned_cols=400 Identities=18% Similarity=0.190 Sum_probs=333.6
Q ss_pred HHHHcCCcceeEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhh
Q 005074 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 347 (715)
Q Consensus 268 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~ 347 (715)
.+|.||+.++++...+ .+|+++++++|++||+.|+++|.++|.++|++++++|++|+++|++++++|++++..
T Consensus 6 ~~P~t~~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~- 78 (457)
T PRK09406 6 INPATGETVKTFTALT------DDEVDAAIARAHARFRDYRTTTFAQRARWANAAADLLEAEADQVAALMTLEMGKTLA- 78 (457)
T ss_pred ECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHhcCCCHH-
Confidence 4688999999998888 899999999999999999999999999999999999999999999998877765432
Q ss_pred chhHHHHHHhhcChhHHHHHHHHHHHHhcccccccccccccccCCCeEEEEeeeceeEEEEEcCC-Chh-hHHHHHHHHH
Q 005074 348 GYAKSLVSRLALKPGKISSLAKSIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAI 425 (715)
Q Consensus 348 g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~AL 425 (715)
++. .++......++++++.++++.. ..........+...+++++|+|||++|+|| ||. +.+++++|||
T Consensus 79 ---~a~-~ev~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~P~GvV~~I~PwN~Pl~~~~~~~~~AL 148 (457)
T PRK09406 79 ---SAK-AEALKCAKGFRYYAEHAEALLA------DEPADAAAVGASRAYVRYQPLGVVLAVMPWNFPLWQVVRFAAPAL 148 (457)
T ss_pred ---HHH-HHHHHHHHHHHHHHHHHHHHhC------CccccccCCCCceEEEEEecceeEEEECCccchHHHHHHHHHHHH
Confidence 221 1222223334444444443321 111000001223567889999999999998 685 5679999999
Q ss_pred HhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecCcchhhHhhcCCCCccEEEeecCHHHHHHHHhhcC--
Q 005074 426 RSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK-- 502 (715)
Q Consensus 426 aaGN~vvlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a~-- 502 (715)
++||+||+|||+.||+++..+++++.+ + ||+|+||+|+++...+..|..||+|++|+||||+++|+.|++.++
T Consensus 149 aaGN~VV~Kps~~~p~~~~~l~~l~~~----aGlP~gvv~~v~~g~~~~~~l~~~~~i~~V~fTGs~~~G~~i~~~a~~~ 224 (457)
T PRK09406 149 MAGNVGLLKHASNVPQTALYLADLFRR----AGFPDGCFQTLLVGSGAVEAILRDPRVAAATLTGSEPAGRAVAAIAGDE 224 (457)
T ss_pred HcCCEEEEECCCcCcHHHHHHHHHHHH----hCCCcCcEEEEcCCchhHHHHhcCCCcCEEEEECcHHHHHHHHHHHHhc
Confidence 999999999999999999999999987 8 999999999743334555678999999999999999999988773
Q ss_pred -CCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccCchhHHHHHHHHHhcCCe--------
Q 005074 503 -IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGVG-------- 572 (715)
Q Consensus 503 -~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~f~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~~-------- 572 (715)
||+++|||||||+||++|||+|.|++.+++++|.|+| .|++++|+|||+++| |+|+++|+++++++.+.
T Consensus 225 ~~~~~lElGG~~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~l~~g~p~~~~~~ 303 (457)
T PRK09406 225 IKKTVLELGGSDPFIVMPSADLDRAAETAVTARVQNNGQSCIAAKRFIVHADVY-DAFAEKFVARMAALRVGDPTDPDTD 303 (457)
T ss_pred CCceeeecCCCCeeEECCCCCHHHHHHHHHHHHhhCCCCcccCCeEEEEcHHHH-HHHHHHHHHHHhhCCCCCCCCCCCC
Confidence 8999999999999999999999999999999999987 999999999999999 79999999999877321
Q ss_pred --------------------------E-ecCccc--ccc-c-c-C-----CCCCCccccccCceEEEEEeCCHHHHHHHH
Q 005074 573 --------------------------L-FGGPRA--SKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHI 615 (715)
Q Consensus 573 --------------------------~-~g~~~~--~~~-~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~a 615 (715)
+ .|+.+. .++ + | | ++|.+++||+||||++|++|+|+||||+++
T Consensus 304 ~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~ 383 (457)
T PRK09406 304 VGPLATEQGRDEVEKQVDDAVAAGATILCGGKRPDGPGWFYPPTVITDITPDMRLYTEEVFGPVASLYRVADIDEAIEIA 383 (457)
T ss_pred CCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCceEccEEeecCCCCCHHhhCCCCCceEEEEeeCCHHHHHHHH
Confidence 1 133221 133 3 5 2 357899999999999999999999999999
Q ss_pred HhcCCCceeEEEecCHHHHHHHHHhcCcceEEEcCCCCCCCCCccCCcccccccccccccccccccccceEEEEEEEc
Q 005074 616 HQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRG 693 (715)
Q Consensus 616 N~~~~GL~a~i~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~~~pfG~g~~sG~~~~~~~~~g~~gl~~ft~~K~v~~~ 693 (715)
|+++|||++||||+|.++++++++++++|+|+||+++...+.+||||.|.||+| +++|.+|+++||+.|+|+++
T Consensus 384 n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G----~~~g~~~l~~~t~~k~v~~~ 457 (457)
T PRK09406 384 NATTFGLGSNAWTRDEAEQERFIDDLEAGQVFINGMTVSYPELPFGGVKRSGYG----RELSAHGIREFCNIKTVWIG 457 (457)
T ss_pred hCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCccccccC----ccchHHHHHHhhceEEEEeC
Confidence 999999999999999999999999999999999998777778999999999986 34689999999999998763
No 18
>cd07130 ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B. Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer.
Probab=100.00 E-value=4e-75 Score=654.83 Aligned_cols=403 Identities=18% Similarity=0.218 Sum_probs=339.4
Q ss_pred HHHHHcCCcceeEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHh
Q 005074 267 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 346 (715)
Q Consensus 267 l~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~ 346 (715)
..+|.||+.++++...+ .+|+++++++|++||+.|+++|.++|.++|++++++|++|+++|++++.+|.+++.
T Consensus 16 ~~~P~t~~~i~~~~~~~------~~~v~~av~~a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~- 88 (474)
T cd07130 16 SISPANGEPIARVRQAT------PEDYESTIKAAQEAFKEWRDVPAPKRGEIVRQIGDALRKKKEALGKLVSLEMGKIL- 88 (474)
T ss_pred eECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCH-
Confidence 35688999999998888 89999999999999999999999999999999999999999999998887765432
Q ss_pred hchhHHHHHHhhcChhHHHHHHHHHHHHhcccccc-cccccccccCCCeEEEEeeeceeEEEEEcCC-Chh-hHHHHHHH
Q 005074 347 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEPI-GQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 423 (715)
Q Consensus 347 ~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ 423 (715)
.++. .|+..+++.++++++..+.. +...+. . ..+...++.++|+|||++|+|| ||. +++++++|
T Consensus 89 ---~~a~--------~ev~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ 155 (474)
T cd07130 89 ---PEGL--------GEVQEMIDICDFAVGLSRQLYGLTIPS-E-RPGHRMMEQWNPLGVVGVITAFNFPVAVWGWNAAI 155 (474)
T ss_pred ---HHHH--------HHHHHHHHHHHHHHHhHHHhcCccccC-C-CCCceEEEEEecceeEEEEccCCCHHHHHHHHhhH
Confidence 1221 24555555555554332221 222211 1 1233457789999999999998 685 56799999
Q ss_pred HHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecCcchhhHhhcCCCCccEEEeecCHHHHHHHHhhc-
Q 005074 424 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST- 501 (715)
Q Consensus 424 ALaaGN~vvlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a- 501 (715)
||++||+||+|||+.||+++.++++++.+++.++ ||+|++|+|+++.++++.|..||+||+|+||||+++||.|++.+
T Consensus 156 ALaaGN~VvlKps~~~p~~~~~l~~l~~~~~~~aglP~gv~~~v~g~~~~~~~L~~~~~vd~V~fTGs~~~g~~i~~~aa 235 (474)
T cd07130 156 ALVCGNVVVWKPSPTTPLTAIAVTKIVARVLEKNGLPGAIASLVCGGADVGEALVKDPRVPLVSFTGSTAVGRQVGQAVA 235 (474)
T ss_pred HHHcCCeEEeeCCccCHHHHHHHHHHHHHHHHhcCCCCCcEEEEeCChhHHHHHhcCCCCCEEEEECchHHHHHHHHHHH
Confidence 9999999999999999999999999999888889 99999999996555788888999999999999999999998876
Q ss_pred --CCCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccCchhHHHHHHHHHhcCC-------
Q 005074 502 --KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------- 571 (715)
Q Consensus 502 --~~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~f~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~------- 571 (715)
.+|++||||||||+||++|||||.|++.+++++|.|+| .|+|++|+|||+++| |+|+++|+++++++..
T Consensus 236 ~~~~~~~lElGGk~p~iV~~dadl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~l~~g~p~~~~ 314 (474)
T cd07130 236 ARFGRSLLELGGNNAIIVMEDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESIY-DEVLERLKKAYKQVRIGDPLDDG 314 (474)
T ss_pred hcCCCEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCeEEEEcHhHH-HHHHHHHHHHHhcCCcCCCCCCC
Confidence 37999999999999999999999999999999999987 999999999999999 7999999999987521
Q ss_pred ---------------------------eE-ecCccc--cc-cc-c-C----CCCCCccccccCceEEEEEeCCHHHHHHH
Q 005074 572 ---------------------------GL-FGGPRA--SK-LL-Q-I----PETRLFHHEYNSMVCTVEIVDDVRAAIDH 614 (715)
Q Consensus 572 ---------------------------~~-~g~~~~--~~-~~-p-v----~~~~~~~eE~FGPVl~v~~~~~~deAi~~ 614 (715)
++ .|+... .+ ++ | | ++|++++||+||||++|++|+|+||||++
T Consensus 315 ~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~~~~~~i~~eE~FGPvl~v~~~~~~~eai~~ 394 (474)
T cd07130 315 TLVGPLHTKAAVDNYLAAIEEAKSQGGTVLFGGKVIDGPGNYVEPTIVEGLSDAPIVKEETFAPILYVLKFDTLEEAIAW 394 (474)
T ss_pred CCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCCCeEEccEEEecCCCCHHHhCCCcCCeEEEEEeCCHHHHHHH
Confidence 11 133221 13 33 5 3 34889999999999999999999999999
Q ss_pred HHhcCCCceeEEEecCHHHHHHHHHh--cCcceEEEcCCCCC-CCCCccCCcccccccccccccccccccccceEEEEEE
Q 005074 615 IHQHGSAHTDCIVAEDQKVAETFLCQ--VDSAAVFHNASTRF-CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 691 (715)
Q Consensus 615 aN~~~~GL~a~i~t~d~~~~~~~~~~--l~~G~V~iN~~~~~-~~~~pfG~g~~sG~~~~~~~~~g~~gl~~ft~~K~v~ 691 (715)
+|+++|||++||||+|.+++++++++ +++|+|+||.++.. .+.+||||.|.||+| +++|++|+++||+.|+++
T Consensus 395 aN~~~~gL~a~v~t~d~~~a~~~~~~~~~~~g~v~iN~~~~~~~~~~PfgG~k~SG~G----~~~g~~~~~~f~~~k~~~ 470 (474)
T cd07130 395 NNEVPQGLSSSIFTTDLRNAFRWLGPKGSDCGIVNVNIGTSGAEIGGAFGGEKETGGG----RESGSDAWKQYMRRSTCT 470 (474)
T ss_pred HhCCCCCceEEEEcCCHHHHHHHHhhcCcceEEEEEcCCCCCCCCCCCcCccccccCC----ccchHHHHHHHhheEEEE
Confidence 99999999999999999999999987 99999999986543 467899999999986 356999999999999988
Q ss_pred EcC
Q 005074 692 RGN 694 (715)
Q Consensus 692 ~~~ 694 (715)
+.+
T Consensus 471 ~~~ 473 (474)
T cd07130 471 INY 473 (474)
T ss_pred Eec
Confidence 753
No 19
>PLN02466 aldehyde dehydrogenase family 2 member
Probab=100.00 E-value=4.6e-75 Score=658.97 Aligned_cols=398 Identities=17% Similarity=0.185 Sum_probs=338.6
Q ss_pred HHHHcCCcceeEEecCCcccccHhhHHHHHHHHHHHHHH--HhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
Q 005074 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRR--LQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQ 345 (715)
Q Consensus 268 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~--w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~ 345 (715)
.+|.+|+.++++...+ .+|+++|+++|++||+. |++++.++|.++|++++++|++|+++|++++.+|.++..
T Consensus 78 ~~P~tg~~i~~v~~~~------~~dv~~Av~aA~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~GK~~ 151 (538)
T PLN02466 78 LDPRTGEVIAHVAEGD------AEDVNRAVAAARKAFDEGPWPKMTAYERSRILLRFADLLEKHNDELAALETWDNGKPY 151 (538)
T ss_pred ECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHcCcCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH
Confidence 4578899999998888 89999999999999984 999999999999999999999999999999887765432
Q ss_pred hhchhHHHHHHhhcChhHHHHHHHHHHHHhcccc-cccccccccccCCCeEEEEeeeceeEEEEEcCC-Chh-hHHHHHH
Q 005074 346 EAGYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIAS 422 (715)
Q Consensus 346 ~~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~ 422 (715)
. ++. ..|+...++.+++++.+.+ ..+...+. ..+...+++++|+|||++|+|| ||. +.+++++
T Consensus 152 ~----~a~-------~~Ev~~~~~~l~~~a~~~~~~~g~~~~~---~~~~~~~~~~~P~GVV~~I~PwN~P~~l~~~~i~ 217 (538)
T PLN02466 152 E----QSA-------KAELPMFARLFRYYAGWADKIHGLTVPA---DGPHHVQTLHEPIGVAGQIIPWNFPLLMFAWKVG 217 (538)
T ss_pred H----HHH-------HHHHHHHHHHHHHHHHHHHHhcCccccc---CCCceEEEEEecceEEEEECCCchHHHHHHHHHh
Confidence 1 221 1256666666776664432 22332221 1223457889999999999998 585 5679999
Q ss_pred HHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-cchhhHhhcCCCCccEEEeecCHHHHHHHHhh
Q 005074 423 LAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKES 500 (715)
Q Consensus 423 ~ALaaGN~vvlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~ 500 (715)
|||++||+||+|||+.||+++..+++++++ + ||+|+||+|+| ++++++.|..||+||+|+||||+++|+.|++.
T Consensus 218 pALaaGN~VVlKPs~~tp~~~~~l~~ll~e----aGlP~gvv~vv~g~~~~~~~~L~~~~~vd~V~FTGS~~~G~~v~~~ 293 (538)
T PLN02466 218 PALACGNTIVLKTAEQTPLSALYAAKLLHE----AGLPPGVLNVVSGFGPTAGAALASHMDVDKLAFTGSTDTGKIVLEL 293 (538)
T ss_pred HHHHcCCEEEeECCCCCcHHHHHHHHHHHh----cCCCcccEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHH
Confidence 999999999999999999999999999986 8 99999999996 56788889999999999999999999999876
Q ss_pred cC----CCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccCchhHHHHHHHHHhcCC----
Q 005074 501 TK----IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV---- 571 (715)
Q Consensus 501 a~----~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~f~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~---- 571 (715)
++ ||+++|||||||+||++|||+|.|++.+++++|.|+| .|+|++|+|||+++| |+|+++|++++.++.+
T Consensus 294 aa~~~l~pv~lElGGknp~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~vG~p~ 372 (538)
T PLN02466 294 AAKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHERVY-DEFVEKAKARALKRVVGDPF 372 (538)
T ss_pred HHhcCCCcEEEEcCCCCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCcCcEEEEcHHHH-HHHHHHHHHHHHhccCCCCc
Confidence 63 7999999999999999999999999999999999987 999999999999999 7999999987765521
Q ss_pred ------------------------------eE-ecCccc--cc-cc-c-C-----CCCCCccccccCceEEEEEeCCHHH
Q 005074 572 ------------------------------GL-FGGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRA 610 (715)
Q Consensus 572 ------------------------------~~-~g~~~~--~~-~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~de 610 (715)
++ +|+... .+ ++ | | +++++++||+||||++|++|+|+||
T Consensus 373 ~~~~~~Gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~g~~i~Ptvl~~v~~d~~i~~eE~FGPVl~v~~~~d~de 452 (538)
T PLN02466 373 KKGVEQGPQIDSEQFEKILRYIKSGVESGATLECGGDRFGSKGYYIQPTVFSNVQDDMLIAQDEIFGPVQSILKFKDLDE 452 (538)
T ss_pred cCCCCCccCCCHHHHHHHHHHHHHHHHCCCEEEecCCcCCCCceEEEEEEEecCCCCCchhcCCccCcEEEEEEeCCHHH
Confidence 11 133221 12 23 5 2 3689999999999999999999999
Q ss_pred HHHHHHhcCCCceeEEEecCHHHHHHHHHhcCcceEEEcCCCCCCCCCccCCcccccccccccccccccccccceEEEEE
Q 005074 611 AIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWI 690 (715)
Q Consensus 611 Ai~~aN~~~~GL~a~i~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~~~pfG~g~~sG~~~~~~~~~g~~gl~~ft~~K~v 690 (715)
||+++|+++|||++||||+|.+++.+|++++++|+|+||+.....+..||||.|.||+| +++|++|+++||+.|+|
T Consensus 453 Ai~~aN~~~~GL~a~VfT~d~~~a~~~~~~l~aG~v~IN~~~~~~~~~PfGG~k~SG~G----~~~G~~gl~~ft~~k~v 528 (538)
T PLN02466 453 VIRRANNTRYGLAAGVFTQNLDTANTLSRALRVGTVWVNCFDVFDAAIPFGGYKMSGIG----REKGIYSLNNYLQVKAV 528 (538)
T ss_pred HHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCcCCCCcCccC----cccHHHHHHHhcceEEE
Confidence 99999999999999999999999999999999999999987766677899999999986 35699999999999999
Q ss_pred EEcC
Q 005074 691 LRGN 694 (715)
Q Consensus 691 ~~~~ 694 (715)
++..
T Consensus 529 ~~~~ 532 (538)
T PLN02466 529 VTPL 532 (538)
T ss_pred EEeC
Confidence 8754
No 20
>cd07113 ALDH_PADH_NahF Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like. NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate.
Probab=100.00 E-value=6.9e-75 Score=653.87 Aligned_cols=401 Identities=15% Similarity=0.144 Sum_probs=337.3
Q ss_pred HHHHHcCCcceeEEecCCcccccHhhHHHHHHHHHHHHHH-HhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
Q 005074 267 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRR-LQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQ 345 (715)
Q Consensus 267 l~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~-w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~ 345 (715)
..+|.+|+.++++..++ .+|+++++++|++||+. |+++|.++|.++|++++++|++++++|++++.+|.++..
T Consensus 19 ~~~P~tg~~i~~~~~~~------~~~v~~av~~A~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~ 92 (477)
T cd07113 19 ITNPATEQVIASVASAT------EADVDAAVASAWRAFVSAWAKTTPAERGRILLRLADLIEQHGEELAQLETLCSGKSI 92 (477)
T ss_pred eeCCCCCCEEEEEcCCC------HHHHHHHHHHHHHHhHhhhccCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHhcCCCH
Confidence 35688999999998888 89999999999999985 999999999999999999999999999999887765432
Q ss_pred hhchhHHHHHHhhcChhHHHHHHHHHHHHhccccc-ccccccccc---cCCCeEEEEeeeceeEEEEEcCC-Chh-hHHH
Q 005074 346 EAGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTE---LADGLILEKTSCPLGVLLIVFES-RPD-ALVQ 419 (715)
Q Consensus 346 ~~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~g~~~~~~~---~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~ 419 (715)
. ++.. .|+...++.+++++++.+. .+...+... ...+...+++|+|+|||++|+|| ||. +.++
T Consensus 93 ~----~a~~-------~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~ 161 (477)
T cd07113 93 H----LSRA-------FEVGQSANFLRYFAGWATKINGETLAPSIPSMQGERYTAFTRREPVGVVAGIVPWNFSVMIAVW 161 (477)
T ss_pred H----HHHH-------HHHHHHHHHHHHHHHHHHHhcCcccccccccccCCCceEEEEEeecceEEEEcCCChHHHHHHH
Confidence 1 2211 1455566666665543321 222211100 01123567889999999999998 685 5789
Q ss_pred HHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecCcchhhHhhcCCCCccEEEeecCHHHHHHHH
Q 005074 420 IASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIK 498 (715)
Q Consensus 420 ~~~~ALaaGN~vvlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~ 498 (715)
+++|||++||+||+|||+.||+++..+++++.+ + ||+|++|+|++...+++.|..||+||+|+||||+++|+.|+
T Consensus 162 ~i~~ALaaGN~VvlKPs~~tp~~~~~l~~~~~~----aglP~gvv~~v~g~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~ 237 (477)
T cd07113 162 KIGAALATGCTIVIKPSEFTPLTLLRVAELAKE----AGIPDGVLNVVNGKGAVGAQLISHPDVAKVSFTGSVATGKKIG 237 (477)
T ss_pred HHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHH----cCcCCCcEEEEecCchHHHHHhcCCCCCEEEEECcHHHHHHHH
Confidence 999999999999999999999999999999986 8 99999999996333788888999999999999999999998
Q ss_pred hhc---CCCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccCchhHHHHHHHHHhcCC---
Q 005074 499 EST---KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV--- 571 (715)
Q Consensus 499 ~~a---~~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~f~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~--- 571 (715)
+.+ .||+++|||||||+||++|||+|.|++.+++|+|.|+| +|+|++|+|||+++| |+|+++|+++++++.+
T Consensus 238 ~~aa~~~~~~~lElGGkn~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~g~p 316 (477)
T cd07113 238 RQAASDLTRVTLELGGKNAAAFLKDADIDWVVEGLLTAGFLHQGQVCAAPERFYVHRSKF-DELVTKLKQALSSFQVGSP 316 (477)
T ss_pred HHHHhhcCceEeecCCCCeeEECCCCCHHHHHHHHHHHHHhhCCCCCcCCcEEEECHHHH-HHHHHHHHHHHHhCCCCCC
Confidence 877 38999999999999999999999999999999999987 999999999999999 7999999999877621
Q ss_pred -------------------------------eE-ecCccc--cccc--c-C-----CCCCCccccccCceEEEEEeCCHH
Q 005074 572 -------------------------------GL-FGGPRA--SKLL--Q-I-----PETRLFHHEYNSMVCTVEIVDDVR 609 (715)
Q Consensus 572 -------------------------------~~-~g~~~~--~~~~--p-v-----~~~~~~~eE~FGPVl~v~~~~~~d 609 (715)
++ .|+.+. .++| | | +++++++||+||||++|++|+|+|
T Consensus 317 ~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~l~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~d 396 (477)
T cd07113 317 MDESVMFGPLANQPHFDKVCSYLDDARAEGDEIVRGGEALAGEGYFVQPTLVLARSADSRLMREETFGPVVSFVPYEDEE 396 (477)
T ss_pred CCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCeeEeCEEEecCCCCChHHhCCCCCCeEEEEEeCCHH
Confidence 12 233321 1333 5 2 368999999999999999999999
Q ss_pred HHHHHHHhcCCCceeEEEecCHHHHHHHHHhcCcceEEEcCCCCCCCCCccCCcccccccccccccccccccccceEEEE
Q 005074 610 AAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRW 689 (715)
Q Consensus 610 eAi~~aN~~~~GL~a~i~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~~~pfG~g~~sG~~~~~~~~~g~~gl~~ft~~K~ 689 (715)
|||+++|+++|||++||||+|.++++++++++++|+|+||.++...+.+||||.|.||+| +++|++|+++||+.|+
T Consensus 397 eai~~~n~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G----~~~g~~~l~~~t~~k~ 472 (477)
T cd07113 397 ELIQLINDTPFGLTASVWTNNLSKALRYIPRIEAGTVWVNMHTFLDPAVPFGGMKQSGIG----REFGSAFIDDYTELKS 472 (477)
T ss_pred HHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccCC----ccchHHHHHHhhceEE
Confidence 999999999999999999999999999999999999999987666677899999999985 3569999999999999
Q ss_pred EEEc
Q 005074 690 ILRG 693 (715)
Q Consensus 690 v~~~ 693 (715)
|++.
T Consensus 473 v~~~ 476 (477)
T cd07113 473 VMIR 476 (477)
T ss_pred EEEe
Confidence 9764
No 21
>cd07086 ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins. ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105).
Probab=100.00 E-value=1.2e-74 Score=652.21 Aligned_cols=402 Identities=20% Similarity=0.234 Sum_probs=342.9
Q ss_pred HHHHHcCCcceeEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHh
Q 005074 267 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 346 (715)
Q Consensus 267 l~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~ 346 (715)
..+|.||+.++++..++ .+|+++++++|++||+.|+++|.++|.++|++++++|++|+++|++++.+|++++.
T Consensus 17 ~~~P~tg~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~- 89 (478)
T cd07086 17 SRNPANGEPIARVFPAS------PEDVEAAVAAAREAFKEWRKVPAPRRGEIVRQIGEALRKKKEALGRLVSLEMGKIL- 89 (478)
T ss_pred eECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCH-
Confidence 35688999999999888 89999999999999999999999999999999999999999999999877665432
Q ss_pred hchhHHHHHHhhcChhHHHHHHHHHHHHhcccc-cccccccccccCCCeEEEEeeeceeEEEEEcCC-Chh-hHHHHHHH
Q 005074 347 AGYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 423 (715)
Q Consensus 347 ~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ 423 (715)
.++ ..++..+++.++++++..+ ..+...+. . ..+...+++|+|+|||++|+|| ||. ++++++++
T Consensus 90 ---~~a--------~~ev~~~~~~~~~~a~~~~~~~g~~~~~-~-~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~~~~ 156 (478)
T cd07086 90 ---PEG--------LGEVQEMIDICDYAVGLSRMLYGLTIPS-E-RPGHRLMEQWNPLGVVGVITAFNFPVAVPGWNAAI 156 (478)
T ss_pred ---HHH--------HHHHHHHHHHHHHHHHHHHHhcCccccc-C-CCCceEEEEEecceeEEEECCCCcHHHHHHHHHHH
Confidence 121 1245566666666554332 12222221 1 1233567889999999999998 695 67899999
Q ss_pred HHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecCcchhhHhhcCCCCccEEEeecCHHHHHHHHhhc-
Q 005074 424 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST- 501 (715)
Q Consensus 424 ALaaGN~vvlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a- 501 (715)
||++||+||+|||+.||+++..++++++++|.++ +|+|++|+|++...++++|..||++|+|+||||+++|+.|++.+
T Consensus 157 ALaaGN~VIlKps~~~p~~~~~l~~~~~~al~~~glP~gvv~~v~g~~~~~~~L~~~~~vd~v~fTGs~~~g~~i~~~aa 236 (478)
T cd07086 157 ALVCGNTVVWKPSETTPLTAIAVTKILAEVLEKNGLPPGVVNLVTGGGDGGELLVHDPRVPLVSFTGSTEVGRRVGETVA 236 (478)
T ss_pred HHHcCCeEEEECCCcchHHHHHHHHHHHHhhhccCCCccceEEEecCchhHHHHhcCCCCCEEEEECcHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999 99999999996444889999999999999999999999998876
Q ss_pred --CCCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccCchhHHHHHHHHHhcCC-------
Q 005074 502 --KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------- 571 (715)
Q Consensus 502 --~~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~f~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~------- 571 (715)
.+|+++|||||||+||++|||+|.|++.+++|+|.|+| .|+|++|||||+++| |+|+++|+++++++.+
T Consensus 237 ~~~~~~~lElGG~~p~iV~~dAdl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~g~p~~~~ 315 (478)
T cd07086 237 RRFGRVLLELGGNNAIIVMDDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESVY-DEFLERLVKAYKQVRIGDPLDEG 315 (478)
T ss_pred ccCCcEEeecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCCCcCCeEEEEcHHHH-HHHHHHHHHHHHhCCcCCCCCCC
Confidence 38999999999999999999999999999999999987 999999999999999 7999999999987532
Q ss_pred ---------------------------eEe-cCccc----cc-cc-c-C-----CCCCCccccccCceEEEEEeCCHHHH
Q 005074 572 ---------------------------GLF-GGPRA----SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAA 611 (715)
Q Consensus 572 ---------------------------~~~-g~~~~----~~-~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deA 611 (715)
++. |+... .+ ++ | | +++++++||+||||++|++|+|+|||
T Consensus 316 ~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPVl~v~~~~~~dea 395 (478)
T cd07086 316 TLVGPLINQAAVEKYLNAIEIAKSQGGTVLTGGKRIDGGEPGNYVEPTIVTGVTDDARIVQEETFAPILYVIKFDSLEEA 395 (478)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCeEEccEEecCCCCCChhhcCCCcCCEEEEEEeCCHHHH
Confidence 122 33321 13 33 5 2 35899999999999999999999999
Q ss_pred HHHHHhcCCCceeEEEecCHHHHHHHHHh--cCcceEEEcCCCCC-CCCCccCCcccccccccccccccccccccceEEE
Q 005074 612 IDHIHQHGSAHTDCIVAEDQKVAETFLCQ--VDSAAVFHNASTRF-CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTR 688 (715)
Q Consensus 612 i~~aN~~~~GL~a~i~t~d~~~~~~~~~~--l~~G~V~iN~~~~~-~~~~pfG~g~~sG~~~~~~~~~g~~gl~~ft~~K 688 (715)
|+++|+++|||++||||+|.+++++++++ +++|+|+||+++.. .+.+||||.|.||+| +++|.+|+++||+.|
T Consensus 396 i~~~n~~~~gL~a~v~t~d~~~a~~~~~~~~~~~G~v~iN~~~~~~~~~~PfgG~~~SG~G----~~~g~~~~~~f~~~k 471 (478)
T cd07086 396 IAINNDVPQGLSSSIFTEDLREAFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKETGGG----RESGSDAWKQYMRRS 471 (478)
T ss_pred HHHHhCCCCcceEEEEcCCHHHHHHHHhcCcccceeEEECCCCCCCCCCCCCCCcccccCC----ccchHHHHHHhhceE
Confidence 99999999999999999999999999999 99999999987654 467899999999986 246899999999999
Q ss_pred EEEEc
Q 005074 689 WILRG 693 (715)
Q Consensus 689 ~v~~~ 693 (715)
+|+++
T Consensus 472 ~i~~~ 476 (478)
T cd07086 472 TCTIN 476 (478)
T ss_pred EEEEe
Confidence 99875
No 22
>cd07559 ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like. Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences.
Probab=100.00 E-value=1.6e-74 Score=650.48 Aligned_cols=398 Identities=19% Similarity=0.176 Sum_probs=340.8
Q ss_pred HHHHHcCCcceeEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHh
Q 005074 267 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 346 (715)
Q Consensus 267 l~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~ 346 (715)
..+|.+|+.++++..++ .+|+++|+++|++||+.|+++|.++|.++|++++++|++|+++|++++++|.+|..
T Consensus 20 v~~P~t~~~~~~~~~~~------~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~- 92 (480)
T cd07559 20 NYNPVNGKVLCEIPRST------AEDVDLAVDAAHEAFKTWGKTSVAERANILNKIADRIEENLELLAVAETLDNGKPI- 92 (480)
T ss_pred eeCCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCH-
Confidence 35688999999998888 89999999999999999999999999999999999999999999999887765432
Q ss_pred hchhHHHHHHhhcChhHHHHHHHHHHHHhccccc-ccccccccccCCCeEEEEeeeceeEEEEEcCC-Chh-hHHHHHHH
Q 005074 347 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 423 (715)
Q Consensus 347 ~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ 423 (715)
.++.. .++..+++.++++++..+. .+...+. +.+...+++++|+|||++|+|| +|. +.+++++|
T Consensus 93 ---~~a~~-------~ev~~~~~~~~~~a~~~~~~~~~~~~~---~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~i~~ 159 (480)
T cd07559 93 ---RETLA-------ADIPLAIDHFRYFAGVIRAQEGSLSEI---DEDTLSYHFHEPLGVVGQIIPWNFPLLMAAWKLAP 159 (480)
T ss_pred ---HHHHH-------HHHHHHHHHHHHHHHHHHHhcCccccC---CCCceeEEEEeccceEEEECCCchHHHHHHHHHHH
Confidence 12221 2566666777766543322 2222111 1244567889999999999998 585 56799999
Q ss_pred HHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccccCcCceEEecC-cchhhHhhcCCCCccEEEeecCHHHHHHHHhhcC
Q 005074 424 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDTVGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK 502 (715)
Q Consensus 424 ALaaGN~vvlKps~~tp~t~~~l~~~~~~al~~alP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a~ 502 (715)
||++||+||+|||+.||+++..+++++.+ +||+|++|+|++ +.++++.|..||+||+|+||||+.+|++|++.++
T Consensus 160 ALaaGN~VV~KPs~~tp~~~~~l~~l~~~----~lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~aa 235 (480)
T cd07559 160 ALAAGNTVVLKPASQTPLSILVLMELIGD----LLPKGVVNVVTGFGSEAGKPLASHPRIAKLAFTGSTTVGRLIMQYAA 235 (480)
T ss_pred HHHcCCEEEEECchhhhHHHHHHHHHHHH----hCCcCeEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHh
Confidence 99999999999999999999999999986 499999999996 5678888999999999999999999999998873
Q ss_pred ---CCEEEecCCcceEEEcCCC-----CHHHHHHHHHhhccCCCc-cccccceEEEcCcccCchhHHHHHHHHHhcCC--
Q 005074 503 ---IPVLGHADGICHVYVDKSA-----NLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV-- 571 (715)
Q Consensus 503 ---~~~~lElGGk~p~iV~~dA-----Dl~~A~~~iv~~~f~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~-- 571 (715)
||++||||||||+||++|| |+|.|++.+++++|.|+| .|+|++|||||+++| |+|+++|+++++++.+
T Consensus 236 ~~~~p~~lElGGk~p~iV~~dA~~~~~Dl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~l~~G~ 314 (480)
T cd07559 236 ENLIPVTLELGGKSPNIFFDDAMDADDDFDDKAEEGQLGFAFNQGEVCTCPSRALVQESIY-DEFIERAVERFEAIKVGN 314 (480)
T ss_pred ccCCcEEeccCCCCeEEEcCCccccccCHHHHHHHHHHHHHhhCCCCCCCCeEEEEcHHHH-HHHHHHHHHHHHhCCCCC
Confidence 8999999999999999999 999999999999999987 999999999999999 7999999999887632
Q ss_pred --------------------------------eE-ecCccc------ccc-c-c-C-----CCCCCccccccCceEEEEE
Q 005074 572 --------------------------------GL-FGGPRA------SKL-L-Q-I-----PETRLFHHEYNSMVCTVEI 604 (715)
Q Consensus 572 --------------------------------~~-~g~~~~------~~~-~-p-v-----~~~~~~~eE~FGPVl~v~~ 604 (715)
++ .|+.+. .++ + | | +++++++||+||||++|++
T Consensus 315 p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~ 394 (480)
T cd07559 315 PLDPETMMGAQVSKDQLEKILSYVDIGKEEGAEVLTGGERLTLGGLDKGYFYEPTLIKGGNNDMRIFQEEIFGPVLAVIT 394 (480)
T ss_pred CCCCCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCccccCCCCcEECeEEEeCCCCCCcHHhcCCcCceEEEEe
Confidence 11 233221 132 3 5 2 3578999999999999999
Q ss_pred eCCHHHHHHHHHhcCCCceeEEEecCHHHHHHHHHhcCcceEEEcCCCCCCCCCccCCcccccccccccccccccccccc
Q 005074 605 VDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGL 684 (715)
Q Consensus 605 ~~~~deAi~~aN~~~~GL~a~i~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~~~pfG~g~~sG~~~~~~~~~g~~gl~~f 684 (715)
|+|+||||+++|+++|||++||||+|.+++.++++++++|+|+||.+....+.+||||.|.||+| +++|++|+++|
T Consensus 395 ~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~a~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G----~~~g~~~~~~~ 470 (480)
T cd07559 395 FKDEEEAIAIANDTEYGLGGGVWTRDINRALRVARGIQTGRVWVNCYHQYPAHAPFGGYKKSGIG----RETHKMMLDHY 470 (480)
T ss_pred eCCHHHHHHHHhCCCCCCeEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCCccCcCC----ccChHHHHHHh
Confidence 99999999999999999999999999999999999999999999987766778999999999986 34689999999
Q ss_pred eEEEEEEEc
Q 005074 685 LTTRWILRG 693 (715)
Q Consensus 685 t~~K~v~~~ 693 (715)
|+.|++++.
T Consensus 471 ~~~k~v~~~ 479 (480)
T cd07559 471 QQTKNILVS 479 (480)
T ss_pred hceEEEEEe
Confidence 999999874
No 23
>cd07117 ALDH_StaphAldA1 Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like. Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD.
Probab=100.00 E-value=1.6e-74 Score=649.02 Aligned_cols=398 Identities=17% Similarity=0.178 Sum_probs=341.0
Q ss_pred HHHHHcCCcceeEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHh
Q 005074 267 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 346 (715)
Q Consensus 267 l~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~ 346 (715)
..+|.+|+.++++..++ .+|+++++++|++||+.|+++|.++|.++|++++++|++|+++|++++..|++++.
T Consensus 20 ~~nP~t~~~i~~~~~~~------~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~- 92 (475)
T cd07117 20 SYNPANGETLSEITDAT------DADVDRAVKAAQEAFKTWRKTTVAERANILNKIADIIDENKELLAMVETLDNGKPI- 92 (475)
T ss_pred eECCCCCCEEEEEcCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHcCCCH-
Confidence 35688999999998888 89999999999999999999999999999999999999999999998877665432
Q ss_pred hchhHHHHHHhhcChhHHHHHHHHHHHHhcccc-cccccccccccCCCeEEEEeeeceeEEEEEcCC-Chh-hHHHHHHH
Q 005074 347 AGYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 423 (715)
Q Consensus 347 ~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ 423 (715)
.++. ..|+..+++.+++++...+ ..++..+. ..+...+++|+|+|||++|+|| ||. +++++++|
T Consensus 93 ---~~a~-------~~ev~~~i~~l~~~a~~~~~~~~~~~~~---~~~~~~~~~~~P~GVV~~I~PwN~Pl~~~~~~i~~ 159 (475)
T cd07117 93 ---RETR-------AVDIPLAADHFRYFAGVIRAEEGSANMI---DEDTLSIVLREPIGVVGQIIPWNFPFLMAAWKLAP 159 (475)
T ss_pred ---HHHH-------HHHHHHHHHHHHHHHHHHHHhcCccccc---CCCceeEEEEeecceEEEECCCccHHHHHHHHHHH
Confidence 1221 1257777777777765432 22322211 1233467889999999999998 685 56799999
Q ss_pred HHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccccCcCceEEecC-cchhhHhhcCCCCccEEEeecCHHHHHHHHhhc-
Q 005074 424 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDTVGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST- 501 (715)
Q Consensus 424 ALaaGN~vvlKps~~tp~t~~~l~~~~~~al~~alP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a- 501 (715)
||++||+||+|||+.||+++..+++++.+ +||+|++|+|++ +.++++.|..||++|+|+||||+.+|+.|++++
T Consensus 160 AL~aGN~VvlKPs~~~p~~~~~l~~~~~~----~lP~g~~~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa 235 (475)
T cd07117 160 ALAAGNTVVIKPSSTTSLSLLELAKIIQD----VLPKGVVNIVTGKGSKSGEYLLNHPGLDKLAFTGSTEVGRDVAIAAA 235 (475)
T ss_pred HHHcCCEEEEECCccCcHHHHHHHHHHHH----hCCcCcEEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHh
Confidence 99999999999999999999999999985 499999999996 566788888999999999999999999998877
Q ss_pred --CCCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccCchhHHHHHHHHHhcCC-------
Q 005074 502 --KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------- 571 (715)
Q Consensus 502 --~~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~f~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~------- 571 (715)
.+|+++|||||||+||++|||+|.|++.+++++|.|+| .|+|++|||||+++| |+|+++|+++++++.+
T Consensus 236 ~~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~l~~g~p~~~~ 314 (475)
T cd07117 236 KKLIPATLELGGKSANIIFDDANWDKALEGAQLGILFNQGQVCCAGSRIFVQEGIY-DEFVAKLKEKFENVKVGNPLDPD 314 (475)
T ss_pred ccCCcEEEeCCCCCeEEECCCCChHHHHHHHHHHHhhccCCCCCCCeEEEEeHHHH-HHHHHHHHHHHHhccCCCCCCCC
Confidence 38999999999999999999999999999999999987 999999999999999 7999999999887621
Q ss_pred ---------------------------eE-ecCccc------cc-cc-c-C-----CCCCCccccccCceEEEEEeCCHH
Q 005074 572 ---------------------------GL-FGGPRA------SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVR 609 (715)
Q Consensus 572 ---------------------------~~-~g~~~~------~~-~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~d 609 (715)
++ .|+... .+ ++ | | +++++++||+||||++|++|+|+|
T Consensus 315 ~~~gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~ 394 (475)
T cd07117 315 TQMGAQVNKDQLDKILSYVDIAKEEGAKILTGGHRLTENGLDKGFFIEPTLIVNVTNDMRVAQEEIFGPVATVIKFKTED 394 (475)
T ss_pred CcccCcCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCccccCCCCeEEeeEEeecCCCCChhhhCCCcCCeEEEEEECCHH
Confidence 11 133221 12 23 5 2 368899999999999999999999
Q ss_pred HHHHHHHhcCCCceeEEEecCHHHHHHHHHhcCcceEEEcCCCCCCCCCccCCcccccccccccccccccccccceEEEE
Q 005074 610 AAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRW 689 (715)
Q Consensus 610 eAi~~aN~~~~GL~a~i~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~~~pfG~g~~sG~~~~~~~~~g~~gl~~ft~~K~ 689 (715)
|||+++|+++|||++||||+|.+++.++++++++|+|+||++....+.+||||.|.||+| +++|.+|+++||+.|+
T Consensus 395 eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G----~~~g~~~~~~ft~~k~ 470 (475)
T cd07117 395 EVIDMANDSEYGLGGGVFTKDINRALRVARAVETGRVWVNTYNQIPAGAPFGGYKKSGIG----RETHKSMLDAYTQMKN 470 (475)
T ss_pred HHHHHHhCCCcCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccCcCC----CCchHHHHHHHhCeEE
Confidence 999999999999999999999999999999999999999997766778899999999986 3569999999999999
Q ss_pred EEEc
Q 005074 690 ILRG 693 (715)
Q Consensus 690 v~~~ 693 (715)
+++.
T Consensus 471 v~~~ 474 (475)
T cd07117 471 IYID 474 (475)
T ss_pred EEEe
Confidence 8763
No 24
>cd07140 ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids.
Probab=100.00 E-value=1.4e-74 Score=650.09 Aligned_cols=401 Identities=15% Similarity=0.191 Sum_probs=337.9
Q ss_pred HHHHHcCCcceeEEecCCcccccHhhHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
Q 005074 267 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSR--RLQALQSQDRRKILLDVADALEANESLIKVENEADVAAA 344 (715)
Q Consensus 267 l~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~ 344 (715)
..+|.+|+.++++..++ .+|+++|+++|++||+ .|+++|.++|.++|++++++|++|+++|++++.+|.++.
T Consensus 25 ~~nP~tg~~i~~~~~~~------~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~ 98 (486)
T cd07140 25 TINPTDGSVICKVSLAT------VEDVDRAVAAAKEAFENGEWGKMNARDRGRLMYRLADLMEEHQEELATIESLDSGAV 98 (486)
T ss_pred eECCCCCCEEEEEeCCC------HHHHHHHHHHHHHhcCCCchhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCc
Confidence 35688999999999888 8999999999999998 599999999999999999999999999999988776543
Q ss_pred HhhchhHHHHHHhhcChhHHHHHHHHHHHHhccccc-ccccccccc-cCCCeEEEEeeeceeEEEEEcCC-Chh-hHHHH
Q 005074 345 QEAGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTE-LADGLILEKTSCPLGVLLIVFES-RPD-ALVQI 420 (715)
Q Consensus 345 ~~~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~g~~~~~~~-~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~ 420 (715)
. .++.. .|+...++.+++++.+.+. .+...+... .+.+...+++|+|+|||++|+|| ||. +.+++
T Consensus 99 ~----~~a~~-------~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~r~P~GVv~~I~PwN~P~~~~~~~ 167 (486)
T cd07140 99 Y----TLALK-------THVGMSIQTFRYFAGWCDKIQGKTIPINQARPNRNLTLTKREPIGVCGIVIPWNYPLMMLAWK 167 (486)
T ss_pred H----HHHHH-------HHHHHHHHHHHHHHHHHHHhcCccccccccCCCCceEEEEeeccceEEEEcCCchHHHHHHHH
Confidence 2 12221 2455555555555543321 222222110 01222457889999999999998 686 57899
Q ss_pred HHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-cchhhHhhcCCCCccEEEeecCHHHHHHHH
Q 005074 421 ASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIK 498 (715)
Q Consensus 421 ~~~ALaaGN~vvlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~ 498 (715)
++|||++||+||+|||+.||+++..+++++.+ + ||+|++|+|++ +.++++.|..||+|++|+||||+.+||.|+
T Consensus 168 i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~----aglP~gv~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~ 243 (486)
T cd07140 168 MAACLAAGNTVVLKPAQVTPLTALKFAELTVK----AGFPKGVINILPGSGSLVGQRLSDHPDVRKLGFTGSTPIGKHIM 243 (486)
T ss_pred HHHHHHhCCEEEEECCccCcHHHHHHHHHHHH----cCcCCCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHH
Confidence 99999999999999999999999999999986 7 99999999996 667888888999999999999999999998
Q ss_pred hhcC----CCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccCchhHHHHHHHHHhcCC--
Q 005074 499 ESTK----IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV-- 571 (715)
Q Consensus 499 ~~a~----~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~f~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~-- 571 (715)
+.|. ||+++|||||||+||++|||+|.|++.+++++|.|+| .|++++|+|||+++| |+|+++|+++++++.+
T Consensus 244 ~~aa~~~l~~v~lElGGk~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rl~V~~~i~-~~f~~~l~~~~~~l~~g~ 322 (486)
T cd07140 244 KSCAVSNLKKVSLELGGKSPLIIFADCDMDKAVRMGMSSVFFNKGENCIAAGRLFVEESIH-DEFVRRVVEEVKKMKIGD 322 (486)
T ss_pred HHHHhcCCCeEEEEcCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEcHHHH-HHHHHHHHHHHHhCCccC
Confidence 8763 7999999999999999999999999999999999987 999999999999999 7999999999987621
Q ss_pred --------------------------------eE-ecCccc--cc-cc-c-C-----CCCCCccccccCceEEEEEeC--
Q 005074 572 --------------------------------GL-FGGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVD-- 606 (715)
Q Consensus 572 --------------------------------~~-~g~~~~--~~-~~-p-v-----~~~~~~~eE~FGPVl~v~~~~-- 606 (715)
++ +|+... .+ ++ | | +++++++||+||||++|++|+
T Consensus 323 p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~ 402 (486)
T cd07140 323 PLDRSTDHGPQNHKAHLDKLVEYCERGVKEGATLVYGGKQVDRPGFFFEPTVFTDVEDHMFIAKEESFGPIMIISKFDDG 402 (486)
T ss_pred CCCCCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCeeECCEEEeCCCCCChhhhCCCCCCeEEEEEcCCC
Confidence 11 233221 23 33 5 2 368999999999999999998
Q ss_pred CHHHHHHHHHhcCCCceeEEEecCHHHHHHHHHhcCcceEEEcCCCCCCCCCccCCcccccccccccccccccccccceE
Q 005074 607 DVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLT 686 (715)
Q Consensus 607 ~~deAi~~aN~~~~GL~a~i~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~~~pfG~g~~sG~~~~~~~~~g~~gl~~ft~ 686 (715)
|+||||+++|+++|||++||||+|.++++++++++++|.|+||+.....+.+||||.|.||+| +++|++|+++||+
T Consensus 403 ~~~eai~~aN~~~~gL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G----~~~G~~~l~~ft~ 478 (486)
T cd07140 403 DVDGVLQRANDTEYGLASGVFTKDINKALYVSDKLEAGTVFVNTYNKTDVAAPFGGFKQSGFG----KDLGEEALNEYLK 478 (486)
T ss_pred CHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccCcCC----CcchHHHHHHhhc
Confidence 699999999999999999999999999999999999999999997766667899999999986 3569999999999
Q ss_pred EEEEEEc
Q 005074 687 TRWILRG 693 (715)
Q Consensus 687 ~K~v~~~ 693 (715)
.|+|++.
T Consensus 479 ~k~v~~~ 485 (486)
T cd07140 479 TKTVTIE 485 (486)
T ss_pred EEEEEEe
Confidence 9999763
No 25
>cd07116 ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like. Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression.
Probab=100.00 E-value=2.7e-74 Score=649.38 Aligned_cols=397 Identities=18% Similarity=0.162 Sum_probs=337.5
Q ss_pred HHHHHcCCcceeEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHh
Q 005074 267 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 346 (715)
Q Consensus 267 l~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~ 346 (715)
..+|.||+.++++..++ .+|+++|+++|++||+.|+++|.++|.++|++++++|++|+++|+.+++.|.++..
T Consensus 20 v~nP~tg~~i~~~~~~~------~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~- 92 (479)
T cd07116 20 NITPVTGKVFCEVPRST------AEDIELALDAAHAAKEAWGKTSVAERANILNKIADRMEANLEMLAVAETWDNGKPV- 92 (479)
T ss_pred eECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH-
Confidence 35688999999998888 89999999999999999999999999999999999999999999998887654431
Q ss_pred hchhHHHHHHhhcChhHHHHHHHHHHHHhccccc-ccccccccccCCCeEEEEeeeceeEEEEEcCC-Chh-hHHHHHHH
Q 005074 347 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 423 (715)
Q Consensus 347 ~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ 423 (715)
.++. ..|+..+++.++++++..+. .+...+. ..+...+++++|+|||++|+|| ||. +.+++++|
T Consensus 93 ---~~a~-------~~ev~~~~~~~~~~a~~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ 159 (479)
T cd07116 93 ---RETL-------AADIPLAIDHFRYFAGCIRAQEGSISEI---DENTVAYHFHEPLGVVGQIIPWNFPLLMATWKLAP 159 (479)
T ss_pred ---HHHH-------HHHHHHHHHHHHHHHHhHHHcCCeeecC---CCCceEEEEEeccceEEEECCCchHHHHHHHHHHH
Confidence 1221 13577777777777654322 2222211 1234567889999999999998 685 56699999
Q ss_pred HHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccccCcCceEEecC-cchhhHhhcCCCCccEEEeecCHHHHHHHHhhc-
Q 005074 424 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDTVGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST- 501 (715)
Q Consensus 424 ALaaGN~vvlKps~~tp~t~~~l~~~~~~al~~alP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a- 501 (715)
||++||+||+|||+.||+++..+++++++ +||+|++|+|+| +.+++..|..||+||+|+||||+++|+.|++.+
T Consensus 160 ALaaGN~VV~KPs~~tp~~~~~l~~l~~~----alP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa 235 (479)
T cd07116 160 ALAAGNCVVLKPAEQTPASILVLMELIGD----LLPPGVVNVVNGFGLEAGKPLASSKRIAKVAFTGETTTGRLIMQYAS 235 (479)
T ss_pred HHHcCCEEEEECCCCChHHHHHHHHHHHH----HCCcCcEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHH
Confidence 99999999999999999999999999986 499999999996 566788888999999999999999999998877
Q ss_pred --CCCEEEecCCcceEEEcCC------CCHHHHHHHHHhhccCCCc-cccccceEEEcCcccCchhHHHHHHHHHhcCC-
Q 005074 502 --KIPVLGHADGICHVYVDKS------ANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV- 571 (715)
Q Consensus 502 --~~~~~lElGGk~p~iV~~d------ADl~~A~~~iv~~~f~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~- 571 (715)
.||++||||||||+||++| ||||.|++.++++.| |+| +|+|++|||||+++| |+|+++|+++++++..
T Consensus 236 ~~~~p~~lElGGk~p~iV~~da~~~~~adl~~A~~~i~~~~~-~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~l~~G 313 (479)
T cd07116 236 ENIIPVTLELGGKSPNIFFADVMDADDAFFDKALEGFVMFAL-NQGEVCTCPSRALIQESIY-DRFMERALERVKAIKQG 313 (479)
T ss_pred cCCCeEEEECCCCCeEEEecCcccccccCHHHHHHHHHHHHh-cCCCCCCCCeEEEEcHHHH-HHHHHHHHHHHHhcCCC
Confidence 3799999999999999998 799999999999765 555 999999999999999 7999999999887521
Q ss_pred ---------------------------------eE-ecCccc------ccc-c-c-C----CCCCCccccccCceEEEEE
Q 005074 572 ---------------------------------GL-FGGPRA------SKL-L-Q-I----PETRLFHHEYNSMVCTVEI 604 (715)
Q Consensus 572 ---------------------------------~~-~g~~~~------~~~-~-p-v----~~~~~~~eE~FGPVl~v~~ 604 (715)
++ .|+... .++ + | | +++++++||+||||++|++
T Consensus 314 ~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~eE~FGPVl~v~~ 393 (479)
T cd07116 314 NPLDTETMIGAQASLEQLEKILSYIDIGKEEGAEVLTGGERNELGGLLGGGYYVPTTFKGGNKMRIFQEEIFGPVLAVTT 393 (479)
T ss_pred CCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCCCeeecCeEEccCCCChhhhcCCcCceEEEEE
Confidence 12 233221 132 3 5 2 4688999999999999999
Q ss_pred eCCHHHHHHHHHhcCCCceeEEEecCHHHHHHHHHhcCcceEEEcCCCCCCCCCccCCcccccccccccccccccccccc
Q 005074 605 VDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGL 684 (715)
Q Consensus 605 ~~~~deAi~~aN~~~~GL~a~i~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~~~pfG~g~~sG~~~~~~~~~g~~gl~~f 684 (715)
|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++....+..||||.|.||+| +++|++|+++|
T Consensus 394 ~~~~~eai~~aN~~~~gLsa~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G----~~~g~~~l~~~ 469 (479)
T cd07116 394 FKDEEEALEIANDTLYGLGAGVWTRDGNTAYRMGRGIQAGRVWTNCYHLYPAHAAFGGYKQSGIG----RENHKMMLDHY 469 (479)
T ss_pred eCCHHHHHHHHhCCcccceEEEEcCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCcCCCccCcCC----ccChHHHHHHh
Confidence 99999999999999999999999999999999999999999999987777778899999999986 35699999999
Q ss_pred eEEEEEEEc
Q 005074 685 LTTRWILRG 693 (715)
Q Consensus 685 t~~K~v~~~ 693 (715)
|+.|+++++
T Consensus 470 ~~~k~~~~~ 478 (479)
T cd07116 470 QQTKNLLVS 478 (479)
T ss_pred hceEEEEEe
Confidence 999999774
No 26
>TIGR03216 OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehydrogenase. Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation.
Probab=100.00 E-value=2.2e-74 Score=650.43 Aligned_cols=401 Identities=17% Similarity=0.184 Sum_probs=338.9
Q ss_pred HHHHHcCCcceeEEecCCcccccHhhHHHHHHHHHHHHHH-HhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
Q 005074 267 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRR-LQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQ 345 (715)
Q Consensus 267 l~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~-w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~ 345 (715)
..+|++|+.++++..++ .+|+++++++|++||+. |+++|.++|.++|++++++|++|+++|++++++|++++.
T Consensus 18 ~~~P~tg~~i~~~~~~~------~~~v~~av~~A~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~ 91 (481)
T TIGR03216 18 NINPVDGRVIARVHEAG------AAEVDAAVAAARAALKGPWGKMTVAERADLLYAVADEIERRFDDFLAAEVADTGKPR 91 (481)
T ss_pred eECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHhHhhHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcH
Confidence 35688999999998888 89999999999999997 999999999999999999999999999999988775542
Q ss_pred hhchhHHHHHHhhcChhHHHHHHHHHHHHhccccc-ccccccccc-cCCCeEEEEeeeceeEEEEEcCC-Chh-hHHHHH
Q 005074 346 EAGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTE-LADGLILEKTSCPLGVLLIVFES-RPD-ALVQIA 421 (715)
Q Consensus 346 ~~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~g~~~~~~~-~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~ 421 (715)
. ++. ..++..+++.++++++..+. .+...+... ...+...+++|+|+|||++|+|| ||. +.++++
T Consensus 92 ~----~~~-------~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~Pl~~~~~~~ 160 (481)
T TIGR03216 92 S----LAS-------HLDIPRGAANFRVFADVVKNAPTECFEMATPDGKGALNYAVRKPLGVVGVISPWNLPLLLMTWKV 160 (481)
T ss_pred H----HHh-------HHHHHHHHHHHHHHHHHHHHhcCccccccCCCCCCceeEEEEeccceEEEECCCCcHHHHHHHHH
Confidence 1 111 12455556666665543321 122111000 01123457889999999999998 685 578999
Q ss_pred HHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-c-chhhHhhcCCCCccEEEeecCHHHHHHHH
Q 005074 422 SLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-R-EEIPDLLKLDDVIDLVIPRGSNKLVSQIK 498 (715)
Q Consensus 422 ~~ALaaGN~vvlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~-~-~~~~~~l~~~~~v~~v~fTGS~~~g~~i~ 498 (715)
+|||++||+||+|||+.||+|+..+++++.+ + ||+|++|+|+| + ++++++|..||+||+|+||||+.+|+.|+
T Consensus 161 ~~ALaaGN~vvlKPs~~tp~t~~~l~~l~~~----aglP~g~~~~v~g~~~~~~~~~l~~~~~vd~v~fTGS~~~G~~i~ 236 (481)
T TIGR03216 161 GPALACGNTVVVKPSEETPGTATLLGEVMNA----VGVPKGVYNVVHGFGPDSAGEFLTRHPGVDAITFTGETRTGSAIM 236 (481)
T ss_pred HHHHHcCCEEEEECCccchHHHHHHHHHHHH----cCCCcCceEEEecCChhHHHHHHhcCCCCCEEEEECCHHHHHHHH
Confidence 9999999999999999999999999999986 8 99999999985 4 35889899999999999999999999999
Q ss_pred hhc---CCCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccCchhHHHHHHHHHhcCC---
Q 005074 499 EST---KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV--- 571 (715)
Q Consensus 499 ~~a---~~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~f~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~--- 571 (715)
+++ .||++||||||||+||++|||+|.|++.+++|+|.|+| .|+|++|+|||+++| |+|+++|+++++++.+
T Consensus 237 ~~aa~~~~~~~lElgG~n~~iV~~dadl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~-~~f~~~l~~~~~~~~~g~p 315 (481)
T TIGR03216 237 KAAADGVKPVSFELGGKNAAIVFADCDFDAAVAGILRSAFLNTGQVCLGTERVYVERPIF-DRFVAALKARAESLKIGVP 315 (481)
T ss_pred HHHhcCCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHH-HHHHHHHHHHHHhcCCCCC
Confidence 887 38999999999999999999999999999999999987 999999999999999 7999999999987632
Q ss_pred -------------------------------eE-ecCccc-------ccc-c-c-C-----CCCCCccccccCceEEEEE
Q 005074 572 -------------------------------GL-FGGPRA-------SKL-L-Q-I-----PETRLFHHEYNSMVCTVEI 604 (715)
Q Consensus 572 -------------------------------~~-~g~~~~-------~~~-~-p-v-----~~~~~~~eE~FGPVl~v~~ 604 (715)
++ .|+... .++ + | | +++++++||+||||++|++
T Consensus 316 ~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FgPvl~V~~ 395 (481)
T TIGR03216 316 DDPATNMGPLISAEHRDKVLSYYALAVEEGATVVTGGGVPDFGDALAGGAWVQPTIWTGLPDSARVVTEEIFGPCCHIAP 395 (481)
T ss_pred CCCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcccccccCCCCceEccEEEeCCCCCCHHHhCCCCCceEEEEE
Confidence 11 233211 233 3 5 2 3689999999999999999
Q ss_pred eCCHHHHHHHHHhcCCCceeEEEecCHHHHHHHHHhcCcceEEEcCCCCCCCCCccCCcccccccccccccccccccccc
Q 005074 605 VDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGL 684 (715)
Q Consensus 605 ~~~~deAi~~aN~~~~GL~a~i~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~~~pfG~g~~sG~~~~~~~~~g~~gl~~f 684 (715)
|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+.....+.+||||.|.||+| +++|.+|+++|
T Consensus 396 ~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G----~~~g~~~l~~f 471 (481)
T TIGR03216 396 FDSEEEVIALANDTPYGLAASVWTEDLSRAHRVARQMEVGIVWVNSWFLRDLRTPFGGSKLSGIG----REGGVHSLEFY 471 (481)
T ss_pred eCCHHHHHHHHhCCCccceEEEECCCHHHHHHHHHhcCccEEEECCCCCCCCCCCcCCcccCcCC----cCchHHHHHHh
Confidence 99999999999999999999999999999999999999999999987766677899999999986 35699999999
Q ss_pred eEEEEEEEc
Q 005074 685 LTTRWILRG 693 (715)
Q Consensus 685 t~~K~v~~~ 693 (715)
|+.|+|+++
T Consensus 472 ~~~k~v~~~ 480 (481)
T TIGR03216 472 TELTNVCIK 480 (481)
T ss_pred hceEEEEEe
Confidence 999999763
No 27
>PRK13252 betaine aldehyde dehydrogenase; Provisional
Probab=100.00 E-value=3.4e-74 Score=650.00 Aligned_cols=399 Identities=16% Similarity=0.183 Sum_probs=339.6
Q ss_pred HHHHHcCCcceeEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHh
Q 005074 267 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 346 (715)
Q Consensus 267 l~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~ 346 (715)
..+|.+|+.++++..++ .+|+++++++|++||+.|+.+|.++|.++|++++++|++|+++|++++.+|++++.
T Consensus 26 ~~nP~tg~~i~~~~~~~------~~dv~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~- 98 (488)
T PRK13252 26 VINPATGEVLATVQAAT------PADVEAAVASAKQGQKIWAAMTAMERSRILRRAVDILRERNDELAALETLDTGKPI- 98 (488)
T ss_pred eECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCH-
Confidence 35688999999999888 89999999999999999999999999999999999999999999999887765542
Q ss_pred hchhHHHHHHhhcChhHHHHHHHHHHHHhccccc-ccccccccccCCCeEEEEeeeceeEEEEEcCC-Chh-hHHHHHHH
Q 005074 347 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 423 (715)
Q Consensus 347 ~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ 423 (715)
.++.. .++...++.++++++..+. .|...+. ..+...+++|+|+|||++|+|| ||. +.+++++|
T Consensus 99 ---~~a~~-------~ev~~~~~~l~~~~~~~~~~~g~~~~~---~~~~~~~~~~~PlGVv~~I~p~N~P~~~~~~~~~~ 165 (488)
T PRK13252 99 ---QETSV-------VDIVTGADVLEYYAGLAPALEGEQIPL---RGGSFVYTRREPLGVCAGIGAWNYPIQIACWKSAP 165 (488)
T ss_pred ---HHHHH-------HHHHHHHHHHHHHHHHHHHhcCceecc---CCCceEEEEEeeeeEEEEECCCchHHHHHHHHHHH
Confidence 12211 2455556666666543322 2322221 1234567889999999999998 585 57799999
Q ss_pred HHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecCcchhhHhhcCCCCccEEEeecCHHHHHHHHhhcC
Q 005074 424 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK 502 (715)
Q Consensus 424 ALaaGN~vvlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a~ 502 (715)
||++||+||+|||+.+|.|+..+++++++ + +|+|+||+|++...+++.|..||+||+|+||||+++|+.|+++++
T Consensus 166 ALaaGN~Vv~Kps~~~p~t~~~l~~~~~~----aglP~g~v~~v~g~~~~~~~L~~~~~vd~V~fTGS~~~g~~i~~~aa 241 (488)
T PRK13252 166 ALAAGNAMIFKPSEVTPLTALKLAEIYTE----AGLPDGVFNVVQGDGRVGAWLTEHPDIAKVSFTGGVPTGKKVMAAAA 241 (488)
T ss_pred HHhcCCeEEEeCCccCcHHHHHHHHHHHH----cCcCcccEEEEecCcHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHh
Confidence 99999999999999999999999999986 8 999999999964448888889999999999999999999988773
Q ss_pred ---CCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccCchhHHHHHHHHHhcCC-------
Q 005074 503 ---IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------- 571 (715)
Q Consensus 503 ---~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~f~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~------- 571 (715)
+|++||||||||+||++|||+|.|++.+++++|.|+| .|+|++|+|||+++| |+|+++|+++++++.+
T Consensus 242 ~~l~~~~lElgG~~p~iV~~dAdl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~g~p~~~~ 320 (488)
T PRK13252 242 ASLKEVTMELGGKSPLIVFDDADLDRAADIAMLANFYSSGQVCTNGTRVFVQKSIK-AAFEARLLERVERIRIGDPMDPA 320 (488)
T ss_pred hcCCcEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeEEEEcHHHH-HHHHHHHHHHHHhcCCCCCCCCC
Confidence 8999999999999999999999999999999999976 999999999999999 7999999999887621
Q ss_pred ---------------------------eE-ecCccc------cc-cc-c-C-----CCCCCccccccCceEEEEEeCCHH
Q 005074 572 ---------------------------GL-FGGPRA------SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVR 609 (715)
Q Consensus 572 ---------------------------~~-~g~~~~------~~-~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~d 609 (715)
++ .|+.+. .+ ++ | | +++++++||+||||++|++|+|+|
T Consensus 321 ~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~~~ 400 (488)
T PRK13252 321 TNFGPLVSFAHRDKVLGYIEKGKAEGARLLCGGERLTEGGFANGAFVAPTVFTDCTDDMTIVREEIFGPVMSVLTFDDED 400 (488)
T ss_pred CcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCeEEccEEeccCCCCChHhhCCCCCceEEEEeeCCHH
Confidence 12 233211 13 23 5 2 368899999999999999999999
Q ss_pred HHHHHHHhcCCCceeEEEecCHHHHHHHHHhcCcceEEEcCCCCCCCCCccCCcccccccccccccccccccccceEEEE
Q 005074 610 AAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRW 689 (715)
Q Consensus 610 eAi~~aN~~~~GL~a~i~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~~~pfG~g~~sG~~~~~~~~~g~~gl~~ft~~K~ 689 (715)
|||+++|+++|||++||||+|.+++.++++++++|+|+||+.....+.+||||.|.||+| +++|++|+++||+.|+
T Consensus 401 eai~~~n~~~~gL~a~I~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G----~~~g~~~~~~ft~~k~ 476 (488)
T PRK13252 401 EVIARANDTEYGLAAGVFTADLSRAHRVIHQLEAGICWINTWGESPAEMPVGGYKQSGIG----RENGIATLEHYTQIKS 476 (488)
T ss_pred HHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhcCccEEEECCCCCCCCCCCCCCCccCcCC----cCChHHHHHHhcceEE
Confidence 999999999999999999999999999999999999999986655667899999999985 3569999999999999
Q ss_pred EEEcC
Q 005074 690 ILRGN 694 (715)
Q Consensus 690 v~~~~ 694 (715)
|++..
T Consensus 477 i~~~~ 481 (488)
T PRK13252 477 VQVEM 481 (488)
T ss_pred EEEeC
Confidence 98753
No 28
>cd07142 ALDH_F2BC Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like. Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde.
Probab=100.00 E-value=2.4e-74 Score=649.30 Aligned_cols=396 Identities=18% Similarity=0.197 Sum_probs=337.5
Q ss_pred HHHHHcCCcceeEEecCCcccccHhhHHHHHHHHHHHHHH--HhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
Q 005074 267 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRR--LQALQSQDRRKILLDVADALEANESLIKVENEADVAAA 344 (715)
Q Consensus 267 l~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~--w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~ 344 (715)
..+|.||+.++++..++ .+|+++++++|++||+. |+++|.++|.++|++++++|++|+++|++++++|++++
T Consensus 23 v~~P~t~~~i~~v~~~~------~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~ 96 (476)
T cd07142 23 TIDPRNGEVIAHVAEGD------AEDVDRAVKAARKAFDEGPWPRMTGYERSRILLRFADLLEKHADELAALETWDNGKP 96 (476)
T ss_pred eECCCCCCEEEEEcCCC------HHHHHHHHHHHHHhcCCCchhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCC
Confidence 35688999999998888 89999999999999985 99999999999999999999999999999988776554
Q ss_pred HhhchhHHHHHHhhcChhHHHHHHHHHHHHhccccc-ccccccccccCCCeEEEEeeeceeEEEEEcCC-Chh-hHHHHH
Q 005074 345 QEAGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIA 421 (715)
Q Consensus 345 ~~~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~ 421 (715)
.. ++.. .|+..+++.+++++.+.+. .|...+. ..+...+++|+|+|||++|+|| ||. +.++++
T Consensus 97 ~~----~a~~-------~ev~~~~~~l~~~a~~~~~~~g~~~~~---~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~i 162 (476)
T cd07142 97 YE----QARY-------AEVPLAARLFRYYAGWADKIHGMTLPA---DGPHHVYTLHEPIGVVGQIIPWNFPLLMFAWKV 162 (476)
T ss_pred HH----HHHH-------HHHHHHHHHHHHHHHHHHHhcCccccc---CCCceEEEEEeceeeEEEECCCccHHHHHHHHH
Confidence 21 2211 2455666666666644322 2332221 1123457889999999999998 686 567999
Q ss_pred HHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-cchhhHhhcCCCCccEEEeecCHHHHHHHHh
Q 005074 422 SLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKE 499 (715)
Q Consensus 422 ~~ALaaGN~vvlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~ 499 (715)
+|||++||+||+|||+.||+++..+++++.+ + ||+|++|+|++ ++++++.|..||++|+|+||||+.+|+.|++
T Consensus 163 ~~ALaaGN~VV~KPs~~tp~~~~~l~~~~~~----aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~v~fTGs~~~G~~v~~ 238 (476)
T cd07142 163 GPALACGNTIVLKPAEQTPLSALLAAKLAAE----AGLPDGVLNIVTGFGPTAGAAIASHMDVDKVAFTGSTEVGKIIMQ 238 (476)
T ss_pred HHHHHcCCEEEEECCCcccHHHHHHHHHHHH----cCcCcccEEEEeCCchhHHHHHhcCCCCCEEEEECcHHHHHHHHH
Confidence 9999999999999999999999999999986 8 99999999996 5668888999999999999999999999998
Q ss_pred hcC----CCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccCchhHHHHHHHHHhcC----
Q 005074 500 STK----IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEG---- 570 (715)
Q Consensus 500 ~a~----~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~f~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~---- 570 (715)
.++ +|+++|||||||+||++|||+|.|++.+++|+|.|+| .|+|++|||||+++| |+|+++|+++++++.
T Consensus 239 ~aa~~~~~~v~lElgGk~p~iV~~dADl~~Aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~G~p 317 (476)
T cd07142 239 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHESIY-DEFVEKAKARALKRVVGDP 317 (476)
T ss_pred HHHHcCCCeEEEECCCCCeeEECCCCCHHHHHHHHHHHHhcCCCCCCCCCeeEEEeHHHH-HHHHHHHHHHHHhcCCCCC
Confidence 763 7999999999999999999999999999999999976 999999999999999 799999999887652
Q ss_pred ------------------------------CeE-ecCccc--cc-cc-c-C-----CCCCCccccccCceEEEEEeCCHH
Q 005074 571 ------------------------------VGL-FGGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVR 609 (715)
Q Consensus 571 ------------------------------~~~-~g~~~~--~~-~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~d 609 (715)
+++ .|+... .+ ++ | | +++++++||+||||++|++|+|+|
T Consensus 318 ~~~~~~~Gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~ 397 (476)
T cd07142 318 FRKGVEQGPQVDKEQFEKILSYIEHGKEEGATLITGGDRIGSKGYYIQPTIFSDVKDDMKIARDEIFGPVQSILKFKTVD 397 (476)
T ss_pred CCCCCcCCcCcCHHHHHHHHHHHHHHHhCCCEEEecCCcCCCCCeeEccEEeecCCCCChhhhCCccCceEEEEeeCCHH
Confidence 112 133221 12 23 5 2 357899999999999999999999
Q ss_pred HHHHHHHhcCCCceeEEEecCHHHHHHHHHhcCcceEEEcCCCCCCCCCccCCcccccccccccccccccccccceEEEE
Q 005074 610 AAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRW 689 (715)
Q Consensus 610 eAi~~aN~~~~GL~a~i~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~~~pfG~g~~sG~~~~~~~~~g~~gl~~ft~~K~ 689 (715)
|||+++|+++|||++||||+|.+++.++++++++|+|+||+.....+.+||||.|.||+| +++|++|+++||+.|+
T Consensus 398 eai~~~n~~~~gL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G----~~~g~~~~~~ft~~k~ 473 (476)
T cd07142 398 EVIKRANNSKYGLAAGVFSKNIDTANTLSRALKAGTVWVNCYDVFDASIPFGGYKMSGIG----REKGIYALNNYLQVKA 473 (476)
T ss_pred HHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccCcCC----ccchHHHHHHhhheeE
Confidence 999999999999999999999999999999999999999987777778999999999986 3569999999999999
Q ss_pred EE
Q 005074 690 IL 691 (715)
Q Consensus 690 v~ 691 (715)
++
T Consensus 474 v~ 475 (476)
T cd07142 474 VV 475 (476)
T ss_pred Ee
Confidence 85
No 29
>cd07107 ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like. Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD.
Probab=100.00 E-value=5.5e-74 Score=643.85 Aligned_cols=396 Identities=17% Similarity=0.171 Sum_probs=336.0
Q ss_pred HHHHcCCcceeEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhh
Q 005074 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 347 (715)
Q Consensus 268 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~ 347 (715)
.+|.+|+.++++..++ .+|+++++++|++||+.|+++|.++|.++|++++++|++|+++|++++.+|++++.
T Consensus 2 ~~p~tg~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~-- 73 (456)
T cd07107 2 INPATGQVLARVPAAS------AADVDRAVAAARAAFPEWRATTPLERARMLRELATRLREHAEELALIDALDCGNPV-- 73 (456)
T ss_pred cCCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCH--
Confidence 3578899999998888 89999999999999999999999999999999999999999999999887765432
Q ss_pred chhHHHHHHhhcChhHHHHHHHHHHHHhcccc-cccccccccccCCCeEEEEeeeceeEEEEEcCC-Chh-hHHHHHHHH
Q 005074 348 GYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 424 (715)
Q Consensus 348 g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~A 424 (715)
.++ ..|+...++.++++++..+ ..+...+. ..+...+++|+|+|||++|+|| ||. +.+++++||
T Consensus 74 --~~a--------~~ev~~~~~~l~~~a~~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~A 140 (456)
T cd07107 74 --SAM--------LGDVMVAAALLDYFAGLVTELKGETIPV---GGRNLHYTLREPYGVVARIVAFNHPLMFAAAKIAAP 140 (456)
T ss_pred --HHH--------HHHHHHHHHHHHHHHHHHHHhCCccccC---CCCceEEEEEecceEEEEECCcccHHHHHHHHHhHH
Confidence 122 1245555555555543321 12222221 1233567889999999999998 685 567999999
Q ss_pred HHhCCEEEEeCCcchHHHHHHHHHHHHHhcccccCcCceEEecC-cchhhHhhcCCCCccEEEeecCHHHHHHHHhhc--
Q 005074 425 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDTVGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST-- 501 (715)
Q Consensus 425 LaaGN~vvlKps~~tp~t~~~l~~~~~~al~~alP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a-- 501 (715)
|++||+||+|||+.||.++..+++++.+ +||+|+||+|++ +.++++.|..||++++|+||||+++|+.|++++
T Consensus 141 LaaGN~VV~Kps~~~p~~~~~l~~~~~~----~lP~gvv~~v~g~~~~~~~~l~~~~~i~~v~fTGs~~~g~~i~~~aa~ 216 (456)
T cd07107 141 LAAGNTVVVKPPEQAPLSALRLAELARE----VLPPGVFNILPGDGATAGAALVRHPDVKRIALIGSVPTGRAIMRAAAE 216 (456)
T ss_pred HHcCCEEEEeCCCCChHHHHHHHHHHHH----hCCcCcEEEEeCCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhc
Confidence 9999999999999999999999999986 499999999995 555788888999999999999999999999887
Q ss_pred -CCCEEEecCCcceEEEcCCCCHHHHHHHHHhhc-cCCCc-cccccceEEEcCcccCchhHHHHHHHHHhcCC-------
Q 005074 502 -KIPVLGHADGICHVYVDKSANLDVAKNIVIDAK-IDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------- 571 (715)
Q Consensus 502 -~~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~-f~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~------- 571 (715)
.+|+++|||||||+||++|||+|.|++.+++|+ |.|+| +|+|++|||||+++| |+|+++|+++++++..
T Consensus 217 ~~~~~~lElgG~~p~iV~~dadl~~Aa~~i~~~~~f~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~l~~g~p~~~~ 295 (456)
T cd07107 217 GIKHVTLELGGKNALIVFPDADPEAAADAAVAGMNFTWCGQSCGSTSRLFVHESIY-DEVLARVVERVAAIKVGDPTDPA 295 (456)
T ss_pred CCCeEEEECCCCCeEEECCCCCHHHHHHHHHHhchhhcCCCCCcCCcEEEEcHHHH-HHHHHHHHHHHHhCCCCCCCCCC
Confidence 489999999999999999999999999999996 88776 999999999999999 7999999999886521
Q ss_pred ---------------------------eE-ecCccc------cc-cc-c-C-----CCCCCccccccCceEEEEEeCCHH
Q 005074 572 ---------------------------GL-FGGPRA------SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVR 609 (715)
Q Consensus 572 ---------------------------~~-~g~~~~------~~-~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~d 609 (715)
++ +|+... .+ ++ | | ++|++++||+||||++|++|+|+|
T Consensus 296 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPvl~i~~~~~~~ 375 (456)
T cd07107 296 TTMGPLVSRQQYDRVMHYIDSAKREGARLVTGGGRPEGPALEGGFYVEPTVFADVTPGMRIAREEIFGPVLSVLRWRDEA 375 (456)
T ss_pred CCcCcccCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCceECCEEEECCCCCChhhhCCCCCceEEEEeeCCHH
Confidence 11 233221 13 23 5 2 368999999999999999999999
Q ss_pred HHHHHHHhcCCCceeEEEecCHHHHHHHHHhcCcceEEEcCCCCCCCCCccCCcccccccccccccccccccccceEEEE
Q 005074 610 AAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRW 689 (715)
Q Consensus 610 eAi~~aN~~~~GL~a~i~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~~~pfG~g~~sG~~~~~~~~~g~~gl~~ft~~K~ 689 (715)
|||+++|+++|||++||||+|.++++++++++++|.|+||+++...+.+||||.|+||+| +++|++|+++||+.|+
T Consensus 376 eai~~~n~~~~gL~a~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfgG~k~SG~G----~~~g~~~~~~~~~~k~ 451 (456)
T cd07107 376 EMVAQANGVEYGLTAAIWTNDISQAHRTARRVEAGYVWINGSSRHFLGAPFGGVKNSGIG----REECLEELLSYTQEKN 451 (456)
T ss_pred HHHHHHhCCCCcceEEEECCCHHHHHHHHHhcCcCEEEECCCCCCCCCCCcCCcccccCC----cCchHHHHHHhhceEE
Confidence 999999999999999999999999999999999999999998877778999999999986 3469999999999999
Q ss_pred EEEc
Q 005074 690 ILRG 693 (715)
Q Consensus 690 v~~~ 693 (715)
|+++
T Consensus 452 v~~~ 455 (456)
T cd07107 452 VNVR 455 (456)
T ss_pred EEEe
Confidence 9763
No 30
>cd07148 ALDH_RL0313 Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1. Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD.
Probab=100.00 E-value=4.2e-74 Score=643.83 Aligned_cols=401 Identities=19% Similarity=0.207 Sum_probs=333.2
Q ss_pred HHHHcCCcceeEEecCCcccccHhhHHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHh
Q 005074 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRL-QALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 346 (715)
Q Consensus 268 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w-~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~ 346 (715)
.+|.+|+.++++...+ ++|+++++++|++||+.| +.+|.++|.++|++++++|++++++|++++.+|.+++.
T Consensus 4 ~~P~t~~~i~~~~~~~------~~~v~~av~~A~~a~~~~~~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~- 76 (455)
T cd07148 4 VNPFDLKPIGEVPTVD------WAAIDKALDTAHALFLDRNNWLPAHERIAILERLADLMEERADELALLIAREGGKPL- 76 (455)
T ss_pred cCCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCH-
Confidence 4688999999999988 899999999999999984 67999999999999999999999999998887765442
Q ss_pred hchhHHHHHHhhcChhHHHHHHHHHHHHhcccccccccccccccCCCeEEEEeeeceeEEEEEcCC-Chh-hHHHHHHHH
Q 005074 347 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 424 (715)
Q Consensus 347 ~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~A 424 (715)
.++.. ++....+.++++++.++.+.+...+.+.. ....+...+++|+|+|||++|+|| ||. +.++++++|
T Consensus 77 ---~~a~~-ev~~~i~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~A 148 (455)
T cd07148 77 ---VDAKV-EVTRAIDGVELAADELGQLGGREIPMGLT----PASAGRIAFTTREPIGVVVAISAFNHPLNLIVHQVAPA 148 (455)
T ss_pred ---HHHHH-HHHHHHHHHHHHHHHHHHhcCcccccccc----cCCCCceEEEEEecceEEEEECCCCcHHHHHHHHHHHH
Confidence 12221 22222334444444444432211111100 001234567889999999999998 584 678999999
Q ss_pred HHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecCcchhhHhhcCCCCccEEEeecCHHHHHHHHhhc--
Q 005074 425 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST-- 501 (715)
Q Consensus 425 LaaGN~vvlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a-- 501 (715)
|++||+||+|||+.||+++..+++++++ + ||+|++|+|+++.+.++.|..||+||+|+||||+++|+.|++++
T Consensus 149 LaaGN~VvlKps~~~p~~~~~l~~~~~~----aGlP~gvv~~v~g~~~~~~~L~~~~~v~~v~fTGs~~~G~~i~~~aa~ 224 (455)
T cd07148 149 IAAGCPVIVKPALATPLSCLAFVDLLHE----AGLPEGWCQAVPCENAVAEKLVTDPRVAFFSFIGSARVGWMLRSKLAP 224 (455)
T ss_pred HHcCCEEEeeCCCcccHHHHHHHHHHHH----cCCCcCcEEEEeCChHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhhc
Confidence 9999999999999999999999999987 8 99999999996545788888999999999999999999998876
Q ss_pred CCCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccCchhHHHHHHHHHhcCC---------
Q 005074 502 KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV--------- 571 (715)
Q Consensus 502 ~~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~f~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~--------- 571 (715)
.+|+++|||||||+||++|||+|.|++.+++|+|.|+| .|+|++|||||+++| |+|+++|+++++++.+
T Consensus 225 ~~~~~lElGG~~p~iV~~dADl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~g~p~~~~~~ 303 (455)
T cd07148 225 GTRCALEHGGAAPVIVDRSADLDAMIPPLVKGGFYHAGQVCVSVQRVFVPAEIA-DDFAQRLAAAAEKLVVGDPTDPDTE 303 (455)
T ss_pred CCcEEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCccCCeEEEEcHhHH-HHHHHHHHHHHhcCCCCCCCCCCCc
Confidence 38999999999999999999999999999999999976 999999999999999 7999999999887632
Q ss_pred -------------------------eE-ecCccccc-cc-c-C-----CCCCCccccccCceEEEEEeCCHHHHHHHHHh
Q 005074 572 -------------------------GL-FGGPRASK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQ 617 (715)
Q Consensus 572 -------------------------~~-~g~~~~~~-~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~ 617 (715)
++ .|+.+..+ ++ | | +++++++||+||||++|++|+|+||||+++|+
T Consensus 304 ~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~n~ 383 (455)
T cd07148 304 VGPLIRPREVDRVEEWVNEAVAAGARLLCGGKRLSDTTYAPTVLLDPPRDAKVSTQEIFGPVVCVYSYDDLDEAIAQANS 383 (455)
T ss_pred CCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCeEcCEEEeCCCCCCHHHhCCCcCCeEEEEecCCHHHHHHHHhC
Confidence 11 13322222 22 5 3 36889999999999999999999999999999
Q ss_pred cCCCceeEEEecCHHHHHHHHHhcCcceEEEcCCCCCC-CCCccCCcccccccccccccccccccccceEEEEEEE
Q 005074 618 HGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFC-DGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILR 692 (715)
Q Consensus 618 ~~~GL~a~i~t~d~~~~~~~~~~l~~G~V~iN~~~~~~-~~~pfG~g~~sG~~~~~~~~~g~~gl~~ft~~K~v~~ 692 (715)
++|||++||||+|.+++.+|++++++|+|+||+++... +.+||||.|.||+| +++|++|+++||+.|++.+
T Consensus 384 ~~~gL~a~i~t~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~PfgG~k~SG~G----~~~g~~~~~~~~~~k~~~~ 455 (455)
T cd07148 384 LPVAFQAAVFTKDLDVALKAVRRLDATAVMVNDHTAFRVDWMPFAGRRQSGYG----TGGIPYTMHDMTQEKMAVI 455 (455)
T ss_pred CCCCceEEEEcCCHHHHHHHHHHcCcCeEEECCCCCCCCCCCCCCcchhcccC----CCchHHHHHHhhceeEEeC
Confidence 99999999999999999999999999999999876543 46799999999986 3568999999999999853
No 31
>PTZ00381 aldehyde dehydrogenase family protein; Provisional
Probab=100.00 E-value=7.6e-74 Score=643.27 Aligned_cols=386 Identities=18% Similarity=0.198 Sum_probs=330.9
Q ss_pred HhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhhchhHHHHHHhhcChhHHHHHHH
Q 005074 290 QVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAK 369 (715)
Q Consensus 290 ~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~i~~~~~ 369 (715)
.+|+++++++|++||+.|+.+|.++|.++|++++++|++|+++|++++++|++++.. ++...++..+..+++++++
T Consensus 6 ~~~i~~av~~a~~a~~~~~~~~~~~R~~~L~~l~~~l~~~~~~i~~a~~~d~Gk~~~----ea~~~Ev~~~~~~i~~~~~ 81 (493)
T PTZ00381 6 PEIIPPIVKKLKESFLTGKTRPLEFRKQQLRNLLRMLEENKQEFSEAVHKDLGRHPF----ETKMTEVLLTVAEIEHLLK 81 (493)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH----HHHHHHHHHHHHHHHHHHH
Confidence 789999999999999999999999999999999999999999999999999876532 4444456667788999999
Q ss_pred HHHHHhcccccccccccccccCCCeEEEEeeeceeEEEEEcCC-Chh-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHH
Q 005074 370 SIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILH 447 (715)
Q Consensus 370 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGN~vvlKps~~tp~t~~~l~ 447 (715)
.++.|++.... .. +... .....+++|+|+|||++|+|| ||. ++++++++||+|||+||+|||+.||.|+..++
T Consensus 82 ~~~~~~~~~~~-~~--~~~~--~~~~~~v~~~PlGVV~iI~PwN~Pl~l~~~~l~~ALaaGN~VIlKPse~tp~t~~~l~ 156 (493)
T PTZ00381 82 HLDEYLKPEKV-DT--VGVF--GPGKSYIIPEPLGVVLVIGAWNYPLNLTLIPLAGAIAAGNTVVLKPSELSPHTSKLMA 156 (493)
T ss_pred HHHHHhCCccc-CC--cccc--CCCceEEEEecCcEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHH
Confidence 99988753221 11 1001 112457899999999999998 684 67899999999999999999999999999999
Q ss_pred HHHHHhcccccCcCceEEecCcchhhHhhcCCCCccEEEeecCHHHHHHHHhhcC---CCEEEecCCcceEEEcCCCCHH
Q 005074 448 KVITSAIPDTVGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK---IPVLGHADGICHVYVDKSANLD 524 (715)
Q Consensus 448 ~~~~~al~~alP~gvv~vv~~~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a~---~~~~lElGGk~p~iV~~dADl~ 524 (715)
+++++ +||+|++++|+|+.+++..|..|| +|+|+||||+.+|+.|+++|. +|++||||||||+||++|||++
T Consensus 157 ~ll~~----~lp~~~v~vv~g~~~~~~~l~~~~-~d~i~FTGS~~vG~~V~~~aa~~l~pv~lElGGk~p~iV~~dAdl~ 231 (493)
T PTZ00381 157 KLLTK----YLDPSYVRVIEGGVEVTTELLKEP-FDHIFFTGSPRVGKLVMQAAAENLTPCTLELGGKSPVIVDKSCNLK 231 (493)
T ss_pred HHHHH----hCCcCEEEEecCCHHHHHHHHhCC-CCEEEEECCHHHHHHHHHHHHhcCCcEEEEcCCCCceEEcCCCCHH
Confidence 99986 599999999997555666566677 999999999999999998873 9999999999999999999999
Q ss_pred HHHHHHHhhccCCCc-cccccceEEEcCcccCchhHHHHHHHHHhcCC------------------------------e-
Q 005074 525 VAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------------------------------G- 572 (715)
Q Consensus 525 ~A~~~iv~~~f~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~------------------------------~- 572 (715)
.|++.++||+|.|+| +|+|++|+|||++++ |+|+++|+++++++.. +
T Consensus 232 ~Aa~~i~~g~~~naGQ~C~A~~~vlV~~~i~-d~f~~~l~~~~~~~~g~~~~~~~~~gpli~~~~~~ri~~~i~~~ga~~ 310 (493)
T PTZ00381 232 VAARRIAWGKFLNAGQTCVAPDYVLVHRSIK-DKFIEALKEAIKEFFGEDPKKSEDYSRIVNEFHTKRLAELIKDHGGKV 310 (493)
T ss_pred HHHHHHHHHHHhhcCCcCCCCCEEEEeHHHH-HHHHHHHHHHHHHHhCCCCccCCCcCCCCCHHHHHHHHHHHHhCCCcE
Confidence 999999999999987 999999999999999 7999999998886510 0
Q ss_pred EecCccc-cc-cc-c-C-----CCCCCccccccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEecCHHHHHHHHHhcCc
Q 005074 573 LFGGPRA-SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDS 643 (715)
Q Consensus 573 ~~g~~~~-~~-~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~i~t~d~~~~~~~~~~l~~ 643 (715)
+.|+... .+ ++ | | +++++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++
T Consensus 311 ~~gG~~~~~~~~i~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~~n~~~~gLa~~vft~d~~~~~~~~~~~~s 390 (493)
T PTZ00381 311 VYGGEVDIENKYVAPTIIVNPDLDSPLMQEEIFGPILPILTYENIDEVLEFINSRPKPLALYYFGEDKRHKELVLENTSS 390 (493)
T ss_pred EECCCcCCCCCeEeeEEEecCCCCChHHhccccCCeEEEEeeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCc
Confidence 1132211 12 23 5 2 3689999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEcCCCCC--CCCCccCCcccccccccccccccccccccceEEEEEEEcC
Q 005074 644 AAVFHNASTRF--CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGN 694 (715)
Q Consensus 644 G~V~iN~~~~~--~~~~pfG~g~~sG~~~~~~~~~g~~gl~~ft~~K~v~~~~ 694 (715)
|+|+||++... .+.+||||.|.||+| +++|.+|+++||+.|+|+.+.
T Consensus 391 G~v~IN~~~~~~~~~~~PFGG~g~SG~G----~~~G~~g~~~fs~~k~v~~~~ 439 (493)
T PTZ00381 391 GAVVINDCVFHLLNPNLPFGGVGNSGMG----AYHGKYGFDTFSHPKPVLNKS 439 (493)
T ss_pred ceEEECCccccccCCCCCCCCcCccccc----ccchHHHHHhccceeEEEEcc
Confidence 99999987543 467899999999986 356999999999999998875
No 32
>cd07106 ALDH_AldA-AAD23400 Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like. Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD.
Probab=100.00 E-value=1.2e-73 Score=639.65 Aligned_cols=393 Identities=19% Similarity=0.186 Sum_probs=339.2
Q ss_pred HHHHcCCcceeEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhh
Q 005074 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 347 (715)
Q Consensus 268 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~ 347 (715)
.+|+||+.++++..++ .+|+++++++|++||+.|+++|.++|.++|++++++|++|+++|++++.+|.+++..
T Consensus 2 ~~P~tg~~~~~~~~~~------~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~- 74 (446)
T cd07106 2 INPATGEVFASAPVAS------EAQLDQAVAAAKAAFPGWSATPLEERRAALLAIADAIEANAEELARLLTLEQGKPLA- 74 (446)
T ss_pred cCCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH-
Confidence 3578999999998888 899999999999999999999999999999999999999999999998766544321
Q ss_pred chhHHHHHHhhcChhHHHHHHHHHHHHhcccccccccccccccCCCeEEEEeeeceeEEEEEcCC-Chh-hHHHHHHHHH
Q 005074 348 GYAKSLVSRLALKPGKISSLAKSIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAI 425 (715)
Q Consensus 348 g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~AL 425 (715)
++ ..|+..+++.++++++...+ +...+. ..+...+.+++|+|||++|+|| +|. +.+++++|||
T Consensus 75 ---~a--------~~ev~~~~~~l~~~~~~~~~-~~~~~~---~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~AL 139 (446)
T cd07106 75 ---EA--------QFEVGGAVAWLRYTASLDLP-DEVIED---DDTRRVELRRKPLGVVAAIVPWNFPLLLAAWKIAPAL 139 (446)
T ss_pred ---HH--------HHHHHHHHHHHHHHHhhhhc-CccccC---CCCceEEEEEEcceEEEEEcCCChHHHHHHHHHHHHH
Confidence 11 23677788888887754421 222111 1234567889999999999998 585 5679999999
Q ss_pred HhCCEEEEeCCcchHHHHHHHHHHHHHhcccccCcCceEEecCcchhhHhhcCCCCccEEEeecCHHHHHHHHhhcC---
Q 005074 426 RSGNGLLLKGGKEAMRSNAILHKVITSAIPDTVGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK--- 502 (715)
Q Consensus 426 aaGN~vvlKps~~tp~t~~~l~~~~~~al~~alP~gvv~vv~~~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a~--- 502 (715)
++||+||+|||+.+|+|+..+++++++ ++|+|++|+++++.+++..|..||++|+|+||||+.+|+.|++++.
T Consensus 140 aaGN~VilKps~~~p~~~~~l~~~~~~----~lP~g~~~~v~g~~~~~~~l~~~~~vd~V~fTGs~~~g~~v~~~aa~~~ 215 (446)
T cd07106 140 LAGNTVVLKPSPFTPLCTLKLGELAQE----VLPPGVLNVVSGGDELGPALTSHPDIRKISFTGSTATGKKVMASAAKTL 215 (446)
T ss_pred HcCCEEEEECCccchHHHHHHHHHHHH----hCCcCeEEEeeCChhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcC
Confidence 999999999999999999999999986 4999999999975567888889999999999999999999998773
Q ss_pred CCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccCchhHHHHHHHHHhcCC----------
Q 005074 503 IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV---------- 571 (715)
Q Consensus 503 ~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~f~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~---------- 571 (715)
+|++||||||||+||++|||+|.|++.+++|+|.|+| .|+|++|||||+++| |+|+++|+++++++.+
T Consensus 216 ~~~~lElGG~~p~iV~~dADl~~aa~~iv~~~~~~~GQ~C~a~~rv~V~~~v~-d~f~~~l~~~~~~~~~G~p~~~~~~~ 294 (446)
T cd07106 216 KRVTLELGGNDAAIVLPDVDIDAVAPKLFWGAFINSGQVCAAIKRLYVHESIY-DEFCEALVALAKAAVVGDGLDPGTTL 294 (446)
T ss_pred CeeEEecCCCCeeEECCCCCHHHHHHHHHHHHHHhcCCCCCCCcEEEEccccH-HHHHHHHHHHHHhcCCCCCCCCCCCC
Confidence 8999999999999999999999999999999999987 999999999999999 7999999999987632
Q ss_pred ------------------------eE-ecCccc--ccc-c-c-C-----CCCCCccccccCceEEEEEeCCHHHHHHHHH
Q 005074 572 ------------------------GL-FGGPRA--SKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIH 616 (715)
Q Consensus 572 ------------------------~~-~g~~~~--~~~-~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN 616 (715)
++ .|+... .++ + | | +++++++||+||||++|++|+|+||||+++|
T Consensus 295 gpli~~~~~~~i~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~FgPvl~v~~~~~~~eai~~~n 374 (446)
T cd07106 295 GPVQNKMQYDKVKELVEDAKAKGAKVLAGGEPLDGPGYFIPPTIVDDPPEGSRIVDEEQFGPVLPVLKYSDEDEVIARAN 374 (446)
T ss_pred CCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeeEcCEEEeCCCCCCHHHhcCccCCeEEEEeeCCHHHHHHHHh
Confidence 11 133221 133 3 5 2 3578999999999999999999999999999
Q ss_pred hcCCCceeEEEecCHHHHHHHHHhcCcceEEEcCCCCCCCCCccCCcccccccccccccccccccccceEEEEEE
Q 005074 617 QHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 691 (715)
Q Consensus 617 ~~~~GL~a~i~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~~~pfG~g~~sG~~~~~~~~~g~~gl~~ft~~K~v~ 691 (715)
+++|||++||||+|.++++++++++++|+|+||++....+.+||||.|+||+| +++|++|+++||+.|+|.
T Consensus 375 ~~~~gL~~~i~t~d~~~~~~~~~~~~~G~v~iN~~~~~~~~~pfGG~~~SG~G----~~~g~~~~~~~t~~k~v~ 445 (446)
T cd07106 375 DSEYGLGASVWSSDLERAEAVARRLEAGTVWINTHGALDPDAPFGGHKQSGIG----VEFGIEGLKEYTQTQVIN 445 (446)
T ss_pred CCCCCceEEEECCCHHHHHHHHHhCCccEEEECCCCCCCCCCCCCCccccccC----ccchHHHHHHhhceeEEe
Confidence 99999999999999999999999999999999998877788999999999985 356999999999999985
No 33
>TIGR01780 SSADH succinate-semialdehyde dehydrogenase. SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070).
Probab=100.00 E-value=6.5e-74 Score=641.50 Aligned_cols=392 Identities=16% Similarity=0.174 Sum_probs=335.2
Q ss_pred HHHHcCCcceeEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhh
Q 005074 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 347 (715)
Q Consensus 268 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~ 347 (715)
.+|.||+.++++...+ .+|+++++++|++||+.|+++|.++|.++|++++++|++++++|+.++.+|.+++..
T Consensus 2 ~~P~tg~~i~~~~~~~------~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~- 74 (448)
T TIGR01780 2 YNPATGEIIGTVPDQG------VEEAEAAIRAAYEAFKTWKNTTAKERSSLLRKWYNLMMENKDDLARLITLENGKPLK- 74 (448)
T ss_pred cCCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH-
Confidence 3678999999998888 899999999999999999999999999999999999999999999988876654321
Q ss_pred chhHHHHHHhhcChhHHHHHHHHHHHHhcccc-cccccccccccCCCeEEEEeeeceeEEEEEcCC-Chh-hHHHHHHHH
Q 005074 348 GYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 424 (715)
Q Consensus 348 g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~A 424 (715)
++ ..|+..+++.+++++...+ ..+...+.. ..+...+++++|+|||++|+|| ||. +.+++++||
T Consensus 75 ---~a--------~~ev~~~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~A 141 (448)
T TIGR01780 75 ---EA--------KGEILYAASFLEWFAEEAKRVYGDTIPSP--QSDKRLLVIKQPVGVCAAITPWNFPAAMITRKAGAA 141 (448)
T ss_pred ---HH--------HHHHHHHHHHHHHHHHHHHHhcCccccCC--CCCceeEEEEeeeeEEEEEcCCChHHHHHHHHHHHH
Confidence 21 2356677777776654332 223322211 1234557789999999999998 686 456899999
Q ss_pred HHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC--cchhhHhhcCCCCccEEEeecCHHHHHHHHhhc
Q 005074 425 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS--REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST 501 (715)
Q Consensus 425 LaaGN~vvlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~--~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a 501 (715)
|++||+||+|||+.+|+++..+++++.+ + +|+|++|+|++ +.++++.|..||+|++|+||||+.+|++|++.+
T Consensus 142 LaaGN~VvlKps~~~p~~~~~l~~~~~~----aGlP~gvv~~v~g~~~~~~~~~l~~~~~i~~v~ftGs~~~g~~v~~~a 217 (448)
T TIGR01780 142 LAAGCTVVVKPAEQTPLSALALARLAEQ----AGIPKGVLNVITGSRAKEVGKVLCTSPLVRKISFTGSTNVGKILMKQS 217 (448)
T ss_pred HHcCCeEeeECCccchHHHHHHHHHHHH----cCCCccceEEEeCCCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHH
Confidence 9999999999999999999999999986 8 99999999995 466788888999999999999999999999877
Q ss_pred ---CCCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccCchhHHHHHHHHHhcCC------
Q 005074 502 ---KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------ 571 (715)
Q Consensus 502 ---~~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~f~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~------ 571 (715)
.||+++|||||||+||++|||+|.|++.+++|+|.|+| .|+|++|+|||+++| |+|+++|+++++++.+
T Consensus 218 a~~~~~~~lElGGk~~~iV~~dadl~~aa~~iv~~~f~~sGQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~l~~G~p~~~ 296 (448)
T TIGR01780 218 ASTVKKVSMELGGNAPFIVFDDADIDQAVEGAMASKFRNAGQTCVCANRLYVHDGIY-DEFAKKLAEAVKKLKVGNGLDE 296 (448)
T ss_pred hhcCCceEeecCCCCeeEECCCCCHHHHHHHHHHHHHHhcCCcccCCceeechHHHH-HHHHHHHHHHHHhcCCCCCCCC
Confidence 38999999999999999999999999999999999986 999999999999999 7999999999987632
Q ss_pred ----------------------------eE-ecCccc--cc-cc-c-C-----CCCCCccccccCceEEEEEeCCHHHHH
Q 005074 572 ----------------------------GL-FGGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAI 612 (715)
Q Consensus 572 ----------------------------~~-~g~~~~--~~-~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi 612 (715)
++ .|+... .+ ++ | | ++|++++||+||||++|++|+|+||||
T Consensus 297 ~~~~gpli~~~~~~~v~~~i~~a~~~Ga~il~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~~eai 376 (448)
T TIGR01780 297 GVTQGPLINEKAVEKVEKHIADAVEKGAKVVTGGKRHELGGNFFEPTVLSNVTQDMLVAKEETFGPLAPVFKFDDEEEVI 376 (448)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeeEcCEEEecCCCCChHhhCCCCCceEEEEEECCHHHHH
Confidence 11 233221 13 33 5 2 368999999999999999999999999
Q ss_pred HHHHhcCCCceeEEEecCHHHHHHHHHhcCcceEEEcCCCCCCCCCccCCcccccccccccccccccccccceEEE
Q 005074 613 DHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTR 688 (715)
Q Consensus 613 ~~aN~~~~GL~a~i~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~~~pfG~g~~sG~~~~~~~~~g~~gl~~ft~~K 688 (715)
+++|+++|||++||||+|.++++++++++++|.|+||++....+..||||.|.||+| +++|++|+++||+.|
T Consensus 377 ~~an~~~~gL~~~vfs~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G----~~~g~~~~~~~~~~k 448 (448)
T TIGR01780 377 AIANDTEVGLAAYFFSRDLATIWRVAEALEYGMVGINTGLISNVVAPFGGVKQSGLG----REGSKYGIEEYLETK 448 (448)
T ss_pred HHHhCCCcCceEEEECCCHHHHHHHHHhCCccEEEECCCCCCCCCCCCCCcccccCC----ccchHHHHHHHhccC
Confidence 999999999999999999999999999999999999998766667899999999985 356999999999875
No 34
>cd07085 ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2. Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD.
Probab=100.00 E-value=1.4e-73 Score=643.89 Aligned_cols=400 Identities=18% Similarity=0.186 Sum_probs=338.6
Q ss_pred HHHHHcCCcceeEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHh
Q 005074 267 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 346 (715)
Q Consensus 267 l~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~ 346 (715)
..+|.+|+.++++..++ .+|+++++++|++||+.|+++|.++|.++|++++++|++|+++|++++..|.+++..
T Consensus 20 ~~~P~t~~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~ 93 (478)
T cd07085 20 VYNPATGEVIARVPLAT------AEEVDAAVAAAKAAFPAWSATPVLKRQQVMFKFRQLLEENLDELARLITLEHGKTLA 93 (478)
T ss_pred eeCCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHH
Confidence 35688999999999888 899999999999999999999999999999999999999999999998877654421
Q ss_pred hchhHHHHHHhhcChhHHHHHHHHHHHHhcccc-cccccccccccCCCeEEEEeeeceeEEEEEcCC-Chh-hHHHHHHH
Q 005074 347 AGYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 423 (715)
Q Consensus 347 ~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ 423 (715)
++ ..|+...++.+++++...+ ..++..+.. ..+...+.+++|+|||++|+|| +|. +.+++++|
T Consensus 94 ----~a--------~~ev~~~~~~~~~~~~~~~~~~g~~~~~~--~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ 159 (478)
T cd07085 94 ----DA--------RGDVLRGLEVVEFACSIPHLLKGEYLENV--ARGIDTYSYRQPLGVVAGITPFNFPAMIPLWMFPM 159 (478)
T ss_pred ----HH--------HHHHHHHHHHHHHHHHHHHHhCCeecccC--CCCceeEEEEecceEEEEECCCChHHHHHHHHHHH
Confidence 22 1255666666666554322 123322211 1234567889999999999998 585 56899999
Q ss_pred HHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecCcchhhHhhcCCCCccEEEeecCHHHHHHHHhhcC
Q 005074 424 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK 502 (715)
Q Consensus 424 ALaaGN~vvlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a~ 502 (715)
||++||+||+|||+.+|+++..+++++.+ + +|+|++|+|++..+.++.|..||+||+|+||||+.+|+.|+++++
T Consensus 160 ALaaGN~VvlKps~~tp~~~~~l~~~l~~----aGlP~gvv~~v~g~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~aa 235 (478)
T cd07085 160 AIACGNTFVLKPSERVPGAAMRLAELLQE----AGLPDGVLNVVHGGKEAVNALLDHPDIKAVSFVGSTPVGEYIYERAA 235 (478)
T ss_pred HHhcCCEEEEECCCcCcHHHHHHHHHHHH----hCCCCCcEEEEecCHHHHHHHhcCCCcCEEEEECCHHHHHHHHHHHh
Confidence 99999999999999999999999999986 7 999999999965556777888999999999999999999988774
Q ss_pred ---CCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccCchhHHHHHHHHHhcCC-------
Q 005074 503 ---IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------- 571 (715)
Q Consensus 503 ---~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~f~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~------- 571 (715)
||+++|||||||+||++|||+|.|++.+++++|.|+| .|++++|||||+++| |+|+++|+++++++.+
T Consensus 236 ~~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-~~f~~~L~~~~~~l~~G~p~~~~ 314 (478)
T cd07085 236 ANGKRVQALGGAKNHAVVMPDADLEQTANALVGAAFGAAGQRCMALSVAVAVGDEA-DEWIPKLVERAKKLKVGAGDDPG 314 (478)
T ss_pred hcCCcEEecCCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEeHHHH-HHHHHHHHHHHHhCCCCCCCCCC
Confidence 8999999999999999999999999999999999987 999999999999999 7999999999887632
Q ss_pred ---------------------------eE-ecCcc------cccc-c-c-C-----CCCCCccccccCceEEEEEeCCHH
Q 005074 572 ---------------------------GL-FGGPR------ASKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVDDVR 609 (715)
Q Consensus 572 ---------------------------~~-~g~~~------~~~~-~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~d 609 (715)
++ .|+.. ..++ + | | +++++++||+||||++|++|+|+|
T Consensus 315 ~~~gpli~~~~~~~v~~~i~~a~~~Ga~~l~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~d 394 (478)
T cd07085 315 ADMGPVISPAAKERIEGLIESGVEEGAKLVLDGRGVKVPGYENGNFVGPTILDNVTPDMKIYKEEIFGPVLSIVRVDTLD 394 (478)
T ss_pred CCcCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCcCCCCeEEcCEEEecCCCCChhhhCcCcCCeEEEEEeCCHH
Confidence 22 23321 1233 3 6 3 358999999999999999999999
Q ss_pred HHHHHHHhcCCCceeEEEecCHHHHHHHHHhcCcceEEEcCCCCCC-CCCccCCcccccccccccccccccccccceEEE
Q 005074 610 AAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFC-DGARFGLGAEVGISTSRIHARGPVGVEGLLTTR 688 (715)
Q Consensus 610 eAi~~aN~~~~GL~a~i~t~d~~~~~~~~~~l~~G~V~iN~~~~~~-~~~pfG~g~~sG~~~~~~~~~g~~gl~~ft~~K 688 (715)
|||+++|+++|||++||||+|.++++++++++++|+|+||+++... +.+||||.|.||+| +++++|++|+++||+.|
T Consensus 395 eai~~~N~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfgG~k~SG~G--~~~~~g~~~~~~~~~~k 472 (478)
T cd07085 395 EAIAIINANPYGNGAAIFTRSGAAARKFQREVDAGMVGINVPIPVPLAFFSFGGWKGSFFG--DLHFYGKDGVRFYTQTK 472 (478)
T ss_pred HHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCCCCcccccCC--CCcCChHHHHHHhcceE
Confidence 9999999999999999999999999999999999999999875443 56899999999985 33356999999999999
Q ss_pred EEEEc
Q 005074 689 WILRG 693 (715)
Q Consensus 689 ~v~~~ 693 (715)
+|++.
T Consensus 473 ~v~~~ 477 (478)
T cd07085 473 TVTSR 477 (478)
T ss_pred EEEEe
Confidence 98764
No 35
>PRK13473 gamma-aminobutyraldehyde dehydrogenase; Provisional
Probab=100.00 E-value=1e-73 Score=644.84 Aligned_cols=401 Identities=15% Similarity=0.170 Sum_probs=340.7
Q ss_pred hHHHHHcCCcceeEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
Q 005074 266 SIIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQ 345 (715)
Q Consensus 266 ~l~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~ 345 (715)
.+.+|.+|+.++++..++ .+|+++++++|++||+.|+++|.++|.++|++++++|++|+++|++++.+|++++.
T Consensus 20 ~~~~P~t~~~i~~~~~~~------~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~ 93 (475)
T PRK13473 20 PVYNPATGEVLAEIAEAS------AAQVDAAVAAADAAFPEWSQTTPKERAEALLKLADAIEENADEFARLESLNCGKPL 93 (475)
T ss_pred eeECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 346788999999999988 89999999999999999999999999999999999999999999998877665432
Q ss_pred hhchhHHHHHHhhcChhHHHHHHHHHHHHhcccccc-cccccccccCCCeEEEEeeeceeEEEEEcCC-Chh-hHHHHHH
Q 005074 346 EAGYAKSLVSRLALKPGKISSLAKSIRILADMEEPI-GQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIAS 422 (715)
Q Consensus 346 ~~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~ 422 (715)
.++. ..|+..+++.++++++..+.. +...+.. ..+...+++|+|+|||++|+|| +|. +.+++++
T Consensus 94 ----~~a~-------~~ev~~~~~~~~~~a~~~~~~~g~~~~~~--~~~~~~~~~r~P~GVv~~I~p~N~P~~~~~~~i~ 160 (475)
T PRK13473 94 ----HLAL-------NDEIPAIVDVFRFFAGAARCLEGKAAGEY--LEGHTSMIRRDPVGVVASIAPWNYPLMMAAWKLA 160 (475)
T ss_pred ----HHHH-------HHHHHHHHHHHHHHHHHHHHhcCcccccC--CCCceeEEEEecceeEEEEccCChHHHHHHHHHH
Confidence 1111 125666666676665433222 2211110 1233457889999999999998 585 5679999
Q ss_pred HHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccccCcCceEEecC-cchhhHhhcCCCCccEEEeecCHHHHHHHHhhc
Q 005074 423 LAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDTVGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST 501 (715)
Q Consensus 423 ~ALaaGN~vvlKps~~tp~t~~~l~~~~~~al~~alP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a 501 (715)
|||++||+||+|||+.+|+++..+++++.+ +||+|++|+|++ +.+++..|..||+||+|+||||+++|+.|++++
T Consensus 161 ~ALaaGN~VIlKps~~~p~~~~~l~~~~~~----alP~gv~~~v~g~~~~~~~~l~~~~~vd~V~fTGs~~~g~~i~~~a 236 (475)
T PRK13473 161 PALAAGNTVVLKPSEITPLTALKLAELAAD----ILPPGVLNVVTGRGATVGDALVGHPKVRMVSLTGSIATGKHVLSAA 236 (475)
T ss_pred HHHhcCCEEEEECCCCChHHHHHHHHHHHH----hCCcCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHH
Confidence 999999999999999999999999999986 499999999996 667888888999999999999999999998877
Q ss_pred C---CCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccCchhHHHHHHHHHhcCC------
Q 005074 502 K---IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------ 571 (715)
Q Consensus 502 ~---~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~f~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~------ 571 (715)
. +|+++|||||||+||++|||+|.|++.+++++|.|+| .|+|++|||||++|| |+|+++|+++++++.+
T Consensus 237 a~~~~~~~lElgG~~p~iV~~dADld~Aa~~i~~~~f~n~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~l~~G~p~~~ 315 (475)
T PRK13473 237 ADSVKRTHLELGGKAPVIVFDDADLDAVVEGIRTFGYYNAGQDCTAACRIYAQRGIY-DDLVAKLAAAVATLKVGDPDDE 315 (475)
T ss_pred hhcCCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHH-HHHHHHHHHHHHhCCCCCCCCC
Confidence 3 8999999999999999999999999999999999987 999999999999999 7999999999887632
Q ss_pred -----------------------------eE-ecCccc--cc-cc-c-C-----CCCCCccccccCceEEEEEeCCHHHH
Q 005074 572 -----------------------------GL-FGGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAA 611 (715)
Q Consensus 572 -----------------------------~~-~g~~~~--~~-~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deA 611 (715)
++ .|+... .+ ++ | | +++.+++||+||||++|++|+|+|||
T Consensus 316 ~~~~gpli~~~~~~~v~~~i~~a~~~G~a~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~dea 395 (475)
T PRK13473 316 DTELGPLISAAHRDRVAGFVERAKALGHIRVVTGGEAPDGKGYYYEPTLLAGARQDDEIVQREVFGPVVSVTPFDDEDQA 395 (475)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHcCCeEEEECCCcCCCCceeEcCEEEecCCCCChhhhCCccCCeEEEeccCCHHHH
Confidence 11 133221 23 33 5 2 36899999999999999999999999
Q ss_pred HHHHHhcCCCceeEEEecCHHHHHHHHHhcCcceEEEcCCCCCCCCCccCCcccccccccccccccccccccceEEEEEE
Q 005074 612 IDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 691 (715)
Q Consensus 612 i~~aN~~~~GL~a~i~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~~~pfG~g~~sG~~~~~~~~~g~~gl~~ft~~K~v~ 691 (715)
|+++|+++|||++||||+|.+++.++++++++|+|+||++....+.+||||.|.||+| +++|.+|+++||+.|+++
T Consensus 396 i~~~N~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G----~~~g~~~~~~~t~~k~i~ 471 (475)
T PRK13473 396 VRWANDSDYGLASSVWTRDVGRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKQSGYG----KDMSLYGLEDYTVVRHVM 471 (475)
T ss_pred HHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCccccccC----ccchHHHHHHHhceEEEE
Confidence 9999999999999999999999999999999999999998776677899999999986 356999999999999998
Q ss_pred EcC
Q 005074 692 RGN 694 (715)
Q Consensus 692 ~~~ 694 (715)
+.+
T Consensus 472 ~~~ 474 (475)
T PRK13473 472 VKH 474 (475)
T ss_pred Eec
Confidence 754
No 36
>TIGR02299 HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase. This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring.
Probab=100.00 E-value=1.6e-73 Score=644.87 Aligned_cols=397 Identities=20% Similarity=0.207 Sum_probs=338.0
Q ss_pred HHHHHcCCcceeEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHh
Q 005074 267 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 346 (715)
Q Consensus 267 l~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~ 346 (715)
..+|.+|+.++++..++ .+|+++++++|++||+.|+++|.++|.++|++++++|++|+++|++++++|++++..
T Consensus 20 ~~nP~tg~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~Gk~~~ 93 (488)
T TIGR02299 20 TLSPATNEVLGSVARGG------AADVDRAAKAAKEAFKRWAELKAAERKRYLHKIADLIEQHADEIAVLECLDCGQPLR 93 (488)
T ss_pred eECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHH
Confidence 35688999999998888 899999999999999999999999999999999999999999999998877654321
Q ss_pred hchhHHHHHHhhcChhHHHHHHHHHHHHhcccc--cccccccccccCCCeEEEEeeeceeEEEEEcCC-Chh-hHHHHHH
Q 005074 347 AGYAKSLVSRLALKPGKISSLAKSIRILADMEE--PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIAS 422 (715)
Q Consensus 347 ~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~--~~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~ 422 (715)
++. .++..+++.++++++..+ ..+...+. .....+++++|+|||++|+|| ||. +.+++++
T Consensus 94 ----~a~--------~ev~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~ 157 (488)
T TIGR02299 94 ----QTR--------QQVIRAAENFRFFADKCEEAMDGRTYPV----DTHLNYTVRVPVGPVGLITPWNAPFMLSTWKIA 157 (488)
T ss_pred ----HHH--------HHHHHHHHHHHHHHHhHHHhcCCccccC----CCceEEEEEEecceEEEECCCccHHHHHHHHHH
Confidence 221 245555555655543322 12222221 123457889999999999998 685 5679999
Q ss_pred HHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-cchhhHhhcCCCCccEEEeecCHHHHHHHHhh
Q 005074 423 LAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKES 500 (715)
Q Consensus 423 ~ALaaGN~vvlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~ 500 (715)
|||++||+||+|||+.||.++..+++++.+ + ||+|++|+|++ +.++++.|..||+||+|+||||+.+|+.|++.
T Consensus 158 ~ALaaGN~VIlKps~~~p~~~~~l~~~~~~----aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~ 233 (488)
T TIGR02299 158 PALAFGNTVVLKPAEWSPLTAARLAEIAKE----AGLPDGVFNLVHGFGEEAGKALVAHPDVKAVSFTGETATGSIIMRN 233 (488)
T ss_pred HHHHcCCEEEEECchhchHHHHHHHHHHHH----cCcChhheeEEeCCchHHHHHHhcCCCcCEEEEECcHHHHHHHHHH
Confidence 999999999999999999999999999886 8 99999999995 55677788899999999999999999999987
Q ss_pred c---CCCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccCchhHHHHHHHHHhcCC-----
Q 005074 501 T---KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV----- 571 (715)
Q Consensus 501 a---~~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~f~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~----- 571 (715)
+ .+|+++|||||||+||++|||+|.|++.+++++|.|+| +|+|++|||||+++| |+|+++|+++++++.+
T Consensus 234 aa~~l~~~~lElGGknp~iV~~dAdl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~-d~f~~~l~~~~~~l~~g~p~~ 312 (488)
T TIGR02299 234 GADTLKRFSMELGGKSPVIVFDDADLERALDAVVFMIFSFNGERCTASSRLLVQESIA-EDFVEKLVERVRAIRVGHPLD 312 (488)
T ss_pred HHhcCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEcHHHH-HHHHHHHHHHHhhCCcCCCCC
Confidence 6 38999999999999999999999999999999999887 999999999999999 7999999999887631
Q ss_pred -----------------------------eE-ecCccc---------cc-cc-c-C-----CCCCCccccccCceEEEEE
Q 005074 572 -----------------------------GL-FGGPRA---------SK-LL-Q-I-----PETRLFHHEYNSMVCTVEI 604 (715)
Q Consensus 572 -----------------------------~~-~g~~~~---------~~-~~-p-v-----~~~~~~~eE~FGPVl~v~~ 604 (715)
++ +|+... .+ ++ | | +++++++||+||||++|++
T Consensus 313 ~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~ 392 (488)
T TIGR02299 313 PETEVGPLIHPEHLAKVLGYVEAAEKEGATILVGGERAPTFRGEDLGRGNYVLPTVFTGADNHMRIAQEEIFGPVLTVIP 392 (488)
T ss_pred CCCCCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccCcccccccCCCCeEEccEEEecCCCCCchhhCCCcCCeEEEEe
Confidence 11 233221 12 33 5 2 3588999999999999999
Q ss_pred eCCHHHHHHHHHhcCCCceeEEEecCHHHHHHHHHhcCcceEEEcCCCCCCCCCccCCcccccccccccccccccccccc
Q 005074 605 VDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGL 684 (715)
Q Consensus 605 ~~~~deAi~~aN~~~~GL~a~i~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~~~pfG~g~~sG~~~~~~~~~g~~gl~~f 684 (715)
|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+.....+..||||.|.||+| +++|++|+++|
T Consensus 393 ~~~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G----~~~g~~~~~~~ 468 (488)
T TIGR02299 393 FKDEEEAIEKANDTRYGLAGYVWTNDVGRAHRVALALEAGMIWVNSQNVRHLPTPFGGVKASGIG----REGGTYSFDFY 468 (488)
T ss_pred eCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCccCcCC----ccchHHHHHHH
Confidence 99999999999999999999999999999999999999999999987766667899999999985 35699999999
Q ss_pred eEEEEEEEcC
Q 005074 685 LTTRWILRGN 694 (715)
Q Consensus 685 t~~K~v~~~~ 694 (715)
|+.|+++++.
T Consensus 469 ~~~k~i~~~~ 478 (488)
T TIGR02299 469 TETKNVALAL 478 (488)
T ss_pred hceEEEEEec
Confidence 9999998865
No 37
>cd07090 ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1. NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis.
Probab=100.00 E-value=1.8e-73 Score=640.34 Aligned_cols=398 Identities=16% Similarity=0.174 Sum_probs=341.4
Q ss_pred HHHHcCCcceeEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhh
Q 005074 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 347 (715)
Q Consensus 268 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~ 347 (715)
.+|.+|+.++++..++ .+|+++++++|++||+.|+++|.++|.++|++++++|++|+++|++++.+|++++.
T Consensus 2 ~~P~t~~~i~~~~~~~------~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~-- 73 (457)
T cd07090 2 IEPATGEVLATVHCAG------AEDVDLAVKSAKAAQKEWSATSGMERGRILRKAADLLRERNDEIARLETIDNGKPI-- 73 (457)
T ss_pred cCCCCCCEEEEEcCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH--
Confidence 3578899999998888 89999999999999999999999999999999999999999999999988765442
Q ss_pred chhHHHHHHhhcChhHHHHHHHHHHHHhccccc-ccccccccccCCCeEEEEeeeceeEEEEEcCC-Chh-hHHHHHHHH
Q 005074 348 GYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 424 (715)
Q Consensus 348 g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~A 424 (715)
.++ ..|+..+++.++++++..+. .++..+. +.+...+++++|+|||++|+|| +|. +.+++++||
T Consensus 74 --~~a--------~~ev~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~A 140 (457)
T cd07090 74 --EEA--------RVDIDSSADCLEYYAGLAPTLSGEHVPL---PGGSFAYTRREPLGVCAGIGAWNYPIQIASWKSAPA 140 (457)
T ss_pred --HHH--------HHHHHHHHHHHHHHHHHHHHhCCeeecc---CCCceEEEEEeecceEEEECCCccHHHHHHHHHHHH
Confidence 122 12566677777766654332 2322211 1244567889999999999998 685 567999999
Q ss_pred HHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecCcchhhHhhcCCCCccEEEeecCHHHHHHHHhhcC-
Q 005074 425 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK- 502 (715)
Q Consensus 425 LaaGN~vvlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a~- 502 (715)
|++||+||+|||+.+|.|+..+++++.+ + ||+|++|+|++..++++.|..||+|++|+||||+.+|++|++++.
T Consensus 141 LaaGN~Vv~Kps~~~~~~~~~l~~~~~~----aGlP~g~~~~v~g~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~ 216 (457)
T cd07090 141 LACGNAMVYKPSPFTPLTALLLAEILTE----AGLPDGVFNVVQGGGETGQLLCEHPDVAKVSFTGSVPTGKKVMSAAAK 216 (457)
T ss_pred HhcCCeeeecCCCcCcHHHHHHHHHHHH----cCCCcccEEEEeCChhhHHHHhcCCCCCEEEEECcHHHHHHHHHHHhc
Confidence 9999999999999999999999999986 8 999999999964457888889999999999999999999998874
Q ss_pred --CCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccCchhHHHHHHHHHhcCC--------
Q 005074 503 --IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV-------- 571 (715)
Q Consensus 503 --~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~f~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~-------- 571 (715)
||+++|||||||+||++|||+|.|++.+++++|.|+| .|+|++|||||++|| |+|+++|+++++++..
T Consensus 217 ~~~~~~lelgG~~p~iV~~dAdl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~g~p~~~~~ 295 (457)
T cd07090 217 GIKHVTLELGGKSPLIIFDDADLENAVNGAMMANFLSQGQVCSNGTRVFVQRSIK-DEFTERLVERTKKIRIGDPLDEDT 295 (457)
T ss_pred cCCceEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHH-HHHHHHHHHHHHhcCCCCCCCCCC
Confidence 8999999999999999999999999999999999987 999999999999999 7999999999987631
Q ss_pred --------------------------eE-ecCccc-------cc-cc-c-C-----CCCCCccccccCceEEEEEeCCHH
Q 005074 572 --------------------------GL-FGGPRA-------SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVR 609 (715)
Q Consensus 572 --------------------------~~-~g~~~~-------~~-~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~d 609 (715)
++ .|+... .+ ++ | | +++++++||+||||++|++|+|+|
T Consensus 296 ~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~d 375 (457)
T cd07090 296 QMGALISEEHLEKVLGYIESAKQEGAKVLCGGERVVPEDGLENGFYVSPCVLTDCTDDMTIVREEIFGPVMSILPFDTEE 375 (457)
T ss_pred CcccccCHHHHHHHHHHHHHHHHCCCEEEECCCcCcccccCCCCeeECCEEEecCCCCChHHhCCCCCCeEEEEEECCHH
Confidence 11 233221 12 33 5 3 358899999999999999999999
Q ss_pred HHHHHHHhcCCCceeEEEecCHHHHHHHHHhcCcceEEEcCCCCCCCCCccCCcccccccccccccccccccccceEEEE
Q 005074 610 AAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRW 689 (715)
Q Consensus 610 eAi~~aN~~~~GL~a~i~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~~~pfG~g~~sG~~~~~~~~~g~~gl~~ft~~K~ 689 (715)
|||+++|+++|||++||||+|.++++++++++++|+|+||+........||||.|.||+| +++|++|+++||+.|+
T Consensus 376 eai~~~n~~~~gLsa~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G----~~~g~~~~~~f~~~k~ 451 (457)
T cd07090 376 EVIRRANDTTYGLAAGVFTRDLQRAHRVIAQLQAGTCWINTYNISPVEVPFGGYKQSGFG----RENGTAALEHYTQLKT 451 (457)
T ss_pred HHHHHHhCCCcCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCcCCCccCcCC----ccchHHHHHHHhCeEE
Confidence 999999999999999999999999999999999999999997766677899999999985 3569999999999999
Q ss_pred EEEcCc
Q 005074 690 ILRGNG 695 (715)
Q Consensus 690 v~~~~~ 695 (715)
+.+.++
T Consensus 452 ~~~~~~ 457 (457)
T cd07090 452 VYVEMG 457 (457)
T ss_pred EEEeCC
Confidence 987543
No 38
>cd07151 ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like. NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD.
Probab=100.00 E-value=2.6e-73 Score=639.60 Aligned_cols=397 Identities=20% Similarity=0.224 Sum_probs=336.5
Q ss_pred HHHHcCCcceeEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhh
Q 005074 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 347 (715)
Q Consensus 268 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~ 347 (715)
.+|++|+.++++...+ .+|+++++++|++||+.|+++|.++|.++|++++++|++|+++|++++.+|.+++..
T Consensus 15 ~~P~t~~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~- 87 (465)
T cd07151 15 LNPYTGETLAEIPAAS------KEDVDEAYRAAAAAQKEWAATLPQERAEILEKAAQILEERRDEIVEWLIRESGSTRI- 87 (465)
T ss_pred ECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH-
Confidence 5678899999998888 899999999999999999999999999999999999999999999998877654421
Q ss_pred chhHHHHHHhhcChhHHHHHHHHHHHHhccccc-ccccccccccCCCeEEEEeeeceeEEEEEcCC-Chh-hHHHHHHHH
Q 005074 348 GYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 424 (715)
Q Consensus 348 g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~A 424 (715)
++ ..|+..+++.+++++...+. .+...+.. ..+...+++|+|+|||++|+|| ||. +.+++++||
T Consensus 88 ---~a--------~~Ev~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~A 154 (465)
T cd07151 88 ---KA--------NIEWGAAMAITREAATFPLRMEGRILPSD--VPGKENRVYREPLGVVGVISPWNFPLHLSMRSVAPA 154 (465)
T ss_pred ---HH--------HHHHHHHHHHHHHHHHhHHHhcCccccCC--CCCceeEEEEecceEEEEECCCChHHHHHHHHHHHH
Confidence 22 12566677777766654322 23222211 1244567889999999999998 685 667999999
Q ss_pred HHhCCEEEEeCCcchHHHH-HHHHHHHHHhcccc-cCcCceEEecC-cchhhHhhcCCCCccEEEeecCHHHHHHHHhhc
Q 005074 425 IRSGNGLLLKGGKEAMRSN-AILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST 501 (715)
Q Consensus 425 LaaGN~vvlKps~~tp~t~-~~l~~~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a 501 (715)
|++||+||+|||+.+|.++ ..+.+++.+ + +|+|+||+|++ +.++++.|..||.+++|+||||+.+|+.|++.+
T Consensus 155 LaaGN~Vi~Kps~~~p~~~~~~l~~~l~~----aG~P~gvv~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a 230 (465)
T cd07151 155 LALGNAVVLKPASDTPITGGLLLAKIFEE----AGLPKGVLNVVVGAGSEIGDAFVEHPVPRLISFTGSTPVGRHIGELA 230 (465)
T ss_pred HHcCCEEEEECCCCCcHhHHHHHHHHHHH----cCcCccceEEEecCchhhHHHHhcCCCCCEEEEECCHHHHHHHHHHH
Confidence 9999999999999999996 678888876 8 99999999995 566788888999999999999999999998877
Q ss_pred ---CCCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccCchhHHHHHHHHHhcCCe-----
Q 005074 502 ---KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGVG----- 572 (715)
Q Consensus 502 ---~~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~f~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~~----- 572 (715)
.||++||||||||+||++|||+|.|++.+++++|.|+| .|++++|||||++|| |+|+++|+++++++.+.
T Consensus 231 a~~~~~~~lElGGk~p~iV~~daDl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~-~~f~~~l~~~~~~~~~g~p~~~ 309 (465)
T cd07151 231 GRHLKKVALELGGNNPFVVLEDADIDAAVNAAVFGKFLHQGQICMAINRIIVHEDVY-DEFVEKFVERVKALPYGDPSDP 309 (465)
T ss_pred HhcCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeHHHH-HHHHHHHHHHHHhCCCCCCCCC
Confidence 38999999999999999999999999999999999987 999999999999999 79999999999876321
Q ss_pred -----------------------------E-ecCccccccc-c-C-----CCCCCccccccCceEEEEEeCCHHHHHHHH
Q 005074 573 -----------------------------L-FGGPRASKLL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHI 615 (715)
Q Consensus 573 -----------------------------~-~g~~~~~~~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~a 615 (715)
+ .|+.....++ | | +++++++||+||||++|++|+|+||||+++
T Consensus 310 ~~~~gpli~~~~~~~v~~~v~~a~~~ga~vl~gg~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~ 389 (465)
T cd07151 310 DTVVGPLINESQVDGLLDKIEQAVEEGATLLVGGEAEGNVLEPTVLSDVTNDMEIAREEIFGPVAPIIKADDEEEALELA 389 (465)
T ss_pred CCCcCCCcCHHHHHHHHHHHHHHHhCCCEEEecCCcCCEEEccEEEeCCCCCCchhhCcCcCCeEEEEeeCCHHHHHHHH
Confidence 1 1221111133 5 2 357999999999999999999999999999
Q ss_pred HhcCCCceeEEEecCHHHHHHHHHhcCcceEEEcCCCCC-CCCCccCCcccccccccccccccccccccceEEEEEEEc
Q 005074 616 HQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRF-CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRG 693 (715)
Q Consensus 616 N~~~~GL~a~i~t~d~~~~~~~~~~l~~G~V~iN~~~~~-~~~~pfG~g~~sG~~~~~~~~~g~~gl~~ft~~K~v~~~ 693 (715)
|+++|||++||||+|.++++++++++++|+|+||+++.. .+.+||||.+.||+| +++|++|+++||+.|++++.
T Consensus 390 n~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G----~~~g~~~l~~~t~~k~~~~~ 464 (465)
T cd07151 390 NDTEYGLSGAVFTSDLERGVQFARRIDAGMTHINDQPVNDEPHVPFGGEKNSGLG----RFNGEWALEEFTTDKWISVQ 464 (465)
T ss_pred hCCCccceEEEECCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCcccccCC----cCChHHHHHHhhceEEEEec
Confidence 999999999999999999999999999999999987654 357899999999985 35699999999999998763
No 39
>PLN02467 betaine aldehyde dehydrogenase
Probab=100.00 E-value=1.7e-73 Score=643.38 Aligned_cols=400 Identities=18% Similarity=0.181 Sum_probs=337.9
Q ss_pred HHHHcCCcceeEEecCCcccccHhhHHHHHHHHHHHH-----HHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
Q 005074 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESS-----RRLQALQSQDRRKILLDVADALEANESLIKVENEADVA 342 (715)
Q Consensus 268 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~-----~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~ 342 (715)
.+|.||+.++++...+ .+|+++|+++|++|| +.|+++|.++|.++|++++++|++|+++|+.++++|.+
T Consensus 28 ~~P~t~~~i~~~~~~~------~~dv~~av~~A~~a~~~~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~G 101 (503)
T PLN02467 28 VNPATEETIGDIPAAT------AEDVDAAVEAARKAFKRNKGKDWARTTGAVRAKYLRAIAAKITERKSELAKLETLDCG 101 (503)
T ss_pred ECCCCCCEEEEEcCCC------HHHHHHHHHHHHHHhhhcccchhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcC
Confidence 5678999999998888 899999999999999 89999999999999999999999999999999887765
Q ss_pred HHHhhchhHHHHHHhhcChhHHHHHHHHHHHHhccccc-ccccccccccC-CCeEEEEeeeceeEEEEEcCC-Chh-hHH
Q 005074 343 AAQEAGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELA-DGLILEKTSCPLGVLLIVFES-RPD-ALV 418 (715)
Q Consensus 343 ~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~g~~~~~~~~~-~~~~~~~~~~PlGVV~~I~p~-~P~-~~~ 418 (715)
++.. ++. .|+..+++.+++++...+. .+........+ .+...+++|+|+|||++|+|| ||. +.+
T Consensus 102 k~~~----~a~--------~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~ 169 (503)
T PLN02467 102 KPLD----EAA--------WDMDDVAGCFEYYADLAEALDAKQKAPVSLPMETFKGYVLKEPLGVVGLITPWNYPLLMAT 169 (503)
T ss_pred CCHH----HHH--------HHHHHHHHHHHHHHHHHHHhcCccccccCCCCCCceeEEEEecCceEEEECCCChHHHHHH
Confidence 5421 221 2455555555555533221 12211000001 123467889999999999998 585 577
Q ss_pred HHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-cchhhHhhcCCCCccEEEeecCHHHHHH
Q 005074 419 QIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQ 496 (715)
Q Consensus 419 ~~~~~ALaaGN~vvlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~ 496 (715)
++++|||++||+||+|||+.||+++..+++++++ + +|+|++|+|++ +.++++.|..||+||+|+||||+.+|+.
T Consensus 170 ~~i~~ALaaGN~Vv~Kps~~tp~~~~~l~~~~~e----ag~P~gvv~~v~g~~~~~~~~L~~~~~v~~v~fTGs~~~g~~ 245 (503)
T PLN02467 170 WKVAPALAAGCTAVLKPSELASVTCLELADICRE----VGLPPGVLNVVTGLGTEAGAPLASHPGVDKIAFTGSTATGRK 245 (503)
T ss_pred HHHHHHHHcCCEEEEECCCcCcHHHHHHHHHHHH----cCcCcCeEEEEeCCchhHHHHHhcCCCCCEEEEECCHHHHHH
Confidence 9999999999999999999999999999999986 8 99999999996 5667888889999999999999999999
Q ss_pred HHhhcC---CCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccCchhHHHHHHHHHhcCC-
Q 005074 497 IKESTK---IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV- 571 (715)
Q Consensus 497 i~~~a~---~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~f~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~- 571 (715)
|++.++ ||+++|||||||+||++|||+|.|++.+++|+|.|+| .|+|++|||||+++| |+|+++|+++++++.+
T Consensus 246 v~~~aa~~~~~~~lElGG~~~~iV~~dADl~~A~~~i~~~~f~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~l~~g 324 (503)
T PLN02467 246 IMTAAAQMVKPVSLELGGKSPIIVFDDVDLDKAVEWAMFGCFWTNGQICSATSRLLVHERIA-SEFLEKLVKWAKNIKIS 324 (503)
T ss_pred HHHHHhccCCcEEEECCCCCceEECCCCCHHHHHHHHHHHHHhhcCCCCCCCcEEEEcHHHH-HHHHHHHHHHHHhcCCC
Confidence 998773 8999999999999999999999999999999999987 999999999999999 7999999999887521
Q ss_pred ---------------------------------eE-ecCccc----ccc-c-c-C-----CCCCCccccccCceEEEEEe
Q 005074 572 ---------------------------------GL-FGGPRA----SKL-L-Q-I-----PETRLFHHEYNSMVCTVEIV 605 (715)
Q Consensus 572 ---------------------------------~~-~g~~~~----~~~-~-p-v-----~~~~~~~eE~FGPVl~v~~~ 605 (715)
++ .|+.+. .++ + | | +++++++||+||||++|++|
T Consensus 325 ~p~~~~~~~Gpli~~~~~~~v~~~v~~a~~~Ga~vl~gG~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~ 404 (503)
T PLN02467 325 DPLEEGCRLGPVVSEGQYEKVLKFISTAKSEGATILCGGKRPEHLKKGFFIEPTIITDVTTSMQIWREEVFGPVLCVKTF 404 (503)
T ss_pred CCCCCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCeEEeeEEEeCCCCCChHhhCCCCCceEEEEee
Confidence 11 233221 132 3 5 2 36789999999999999999
Q ss_pred CCHHHHHHHHHhcCCCceeEEEecCHHHHHHHHHhcCcceEEEcCCCCCCCCCccCCcccccccccccccccccccccce
Q 005074 606 DDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLL 685 (715)
Q Consensus 606 ~~~deAi~~aN~~~~GL~a~i~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~~~pfG~g~~sG~~~~~~~~~g~~gl~~ft 685 (715)
+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++......+||||.|.||+| +++|++|+++||
T Consensus 405 ~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G----~~~G~~~l~~ft 480 (503)
T PLN02467 405 STEDEAIELANDSHYGLAGAVISNDLERCERVSEAFQAGIVWINCSQPCFCQAPWGGIKRSGFG----RELGEWGLENYL 480 (503)
T ss_pred CCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccCcCC----CcchHHHHHHhh
Confidence 9999999999999999999999999999999999999999999987765667899999999985 356999999999
Q ss_pred EEEEEEEcC
Q 005074 686 TTRWILRGN 694 (715)
Q Consensus 686 ~~K~v~~~~ 694 (715)
+.|++.+..
T Consensus 481 ~~k~i~~~~ 489 (503)
T PLN02467 481 SVKQVTKYI 489 (503)
T ss_pred CeEEEEEec
Confidence 999998853
No 40
>cd07143 ALDH_AldA_AN0554 Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like. NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD.
Probab=100.00 E-value=3.7e-73 Score=638.92 Aligned_cols=397 Identities=16% Similarity=0.153 Sum_probs=339.7
Q ss_pred HHHHcCCcceeEEecCCcccccHhhHHHHHHHHHHHHH-HHh-cCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
Q 005074 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSR-RLQ-ALQSQDRRKILLDVADALEANESLIKVENEADVAAAQ 345 (715)
Q Consensus 268 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~-~w~-~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~ 345 (715)
.+|.+|+.++++..++ .+|+++|+++|++||+ .|+ .+|.++|.++|++++++|++|+++|++++.+|++++.
T Consensus 27 ~~P~t~~~i~~~~~~~------~~~v~~av~~a~~a~~~~W~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~ 100 (481)
T cd07143 27 YNPSTGKLITKIAEAT------EADVDIAVEVAHAAFETDWGLKVSGSKRGRCLSKLADLMERNLDYLASIEALDNGKTF 100 (481)
T ss_pred ECCCCCCEEEEEeCCC------HHHHHHHHHHHHHhhhhhhcccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCh
Confidence 4578899999999888 8999999999999998 599 9999999999999999999999999999987765442
Q ss_pred hhchhHHHHHHhhcChhHHHHHHHHHHHHhcccccc-cccccccccCCCeEEEEeeeceeEEEEEcCC-Chh-hHHHHHH
Q 005074 346 EAGYAKSLVSRLALKPGKISSLAKSIRILADMEEPI-GQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIAS 422 (715)
Q Consensus 346 ~~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~ 422 (715)
. +.. ..|+..+++.+++++++.+.. |...+. ..+...+++++|+|||++|+|| ||. +.+++++
T Consensus 101 ~----~~~-------~~ev~~~~~~~~~~a~~a~~~~g~~~~~---~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~ 166 (481)
T cd07143 101 G----TAK-------RVDVQASADTFRYYGGWADKIHGQVIET---DIKKLTYTRHEPIGVCGQIIPWNFPLLMCAWKIA 166 (481)
T ss_pred H----HHH-------HHHHHHHHHHHHHHHHHHHHhcCccccC---CCCceEEEEEecceeEEEECCCcChHHHHHHHHH
Confidence 1 110 125667777777776554322 333221 1234567889999999999998 686 4579999
Q ss_pred HHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-cchhhHhhcCCCCccEEEeecCHHHHHHHHhh
Q 005074 423 LAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKES 500 (715)
Q Consensus 423 ~ALaaGN~vvlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~ 500 (715)
|||++||+||+|||+.+|.++..+++++.+ + ||+|++|+|++ +.++++.|..||++|+|+||||+.+|+.|++.
T Consensus 167 ~ALaaGN~VvlKps~~~p~~~~~l~~~l~~----aGlP~g~v~~v~g~~~~~~~~L~~~~~vd~V~fTGs~~~G~~i~~~ 242 (481)
T cd07143 167 PALAAGNTIVLKPSELTPLSALYMTKLIPE----AGFPPGVINVVSGYGRTCGNAISSHMDIDKVAFTGSTLVGRKVMEA 242 (481)
T ss_pred HHHHcCCEEEEeCCCCCcHHHHHHHHHHHh----cCcCcccEEEEeCCchhHHHHHhcCCCCCEEEEECchHHHHHHHHH
Confidence 999999999999999999999999999986 8 99999999996 55678889999999999999999999999886
Q ss_pred cC----CCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccCchhHHHHHHHHHhcCC----
Q 005074 501 TK----IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV---- 571 (715)
Q Consensus 501 a~----~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~f~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~---- 571 (715)
+. +|+++|||||||+||++|||+|.|++.+++|+|.|+| .|+|++|||||+++| |+|+++|+++++++.+
T Consensus 243 aa~~~~~~~~lElGG~~p~iV~~dADl~~Aa~~i~~~~~~naGQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~G~p~ 321 (481)
T cd07143 243 AAKSNLKKVTLELGGKSPNIVFDDADLESAVVWTAYGIFFNHGQVCCAGSRIYVQEGIY-DKFVKRFKEKAKKLKVGDPF 321 (481)
T ss_pred HHHhcCCEEEeecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEeHhHH-HHHHHHHHHHHHhcCCCCCC
Confidence 63 6999999999999999999999999999999999987 999999999999999 7999999999887632
Q ss_pred ------------------------------eE-ecCccc--cc-cc-c-C-----CCCCCccccccCceEEEEEeCCHHH
Q 005074 572 ------------------------------GL-FGGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRA 610 (715)
Q Consensus 572 ------------------------------~~-~g~~~~--~~-~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~de 610 (715)
++ .|+... .+ ++ | | +++++++||+||||++|++|+|+||
T Consensus 322 ~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~e 401 (481)
T cd07143 322 AEDTFQGPQVSQIQYERIMSYIESGKAEGATVETGGKRHGNEGYFIEPTIFTDVTEDMKIVKEEIFGPVVAVIKFKTEEE 401 (481)
T ss_pred CCCCCCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCCCCCCCceEEeeEEEecCCCCChhhhcCCcCCeEEEEeeCCHHH
Confidence 11 122221 12 23 5 2 3578999999999999999999999
Q ss_pred HHHHHHhcCCCceeEEEecCHHHHHHHHHhcCcceEEEcCCCCCCCCCccCCcccccccccccccccccccccceEEEEE
Q 005074 611 AIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWI 690 (715)
Q Consensus 611 Ai~~aN~~~~GL~a~i~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~~~pfG~g~~sG~~~~~~~~~g~~gl~~ft~~K~v 690 (715)
||+++|+++|||++||||+|.+++.++++++++|+|+||+.....+.+||||.|.||+| +++|++|+++||+.|+|
T Consensus 402 ai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G----~~~G~~~l~~~t~~k~i 477 (481)
T cd07143 402 AIKRANDSTYGLAAAVFTNNINNAIRVANALKAGTVWVNCYNLLHHQVPFGGYKQSGIG----RELGEYALENYTQIKAV 477 (481)
T ss_pred HHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCCCCccccccC----cccHHHHHHHHhCeEEE
Confidence 99999999999999999999999999999999999999998777778899999999985 35699999999999998
Q ss_pred EEc
Q 005074 691 LRG 693 (715)
Q Consensus 691 ~~~ 693 (715)
+++
T Consensus 478 ~~~ 480 (481)
T cd07143 478 HIN 480 (481)
T ss_pred EEe
Confidence 763
No 41
>cd07110 ALDH_F10_BADH Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like. Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine.
Probab=100.00 E-value=5.2e-73 Score=636.36 Aligned_cols=395 Identities=18% Similarity=0.217 Sum_probs=333.8
Q ss_pred HHHHcCCcceeEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhh
Q 005074 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 347 (715)
Q Consensus 268 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~ 347 (715)
.+|+||+.++++...+ .+|+++++++|++||+.|+++|.++|.++|++++++|++|+++|++++.+|.+++.
T Consensus 2 ~~P~t~~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~-- 73 (456)
T cd07110 2 INPATEATIGEIPAAT------AEDVDAAVRAARRAFPRWKKTTGAERAKYLRAIAEGVRERREELAELEARDNGKPL-- 73 (456)
T ss_pred cCCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH--
Confidence 3578999999998888 89999999999999999999999999999999999999999999999887765432
Q ss_pred chhHHHHHHhhcChhHHHHHHHHHHHHhcccccc----cccccccccCCCeEEEEeeeceeEEEEEcCC-Chh-hHHHHH
Q 005074 348 GYAKSLVSRLALKPGKISSLAKSIRILADMEEPI----GQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIA 421 (715)
Q Consensus 348 g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~----g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~ 421 (715)
.++. .|+..+++.++++++..+.. +...+. ...+...+++++|+|||++|+|| ||. +.++++
T Consensus 74 --~~a~--------~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~ 141 (456)
T cd07110 74 --DEAA--------WDVDDVAGCFEYYADLAEQLDAKAERAVPL--PSEDFKARVRREPVGVVGLITPWNFPLLMAAWKV 141 (456)
T ss_pred --HHHH--------HHHHHHHHHHHHHHHHHHHhhccCCccccC--CCCCceeEEEEecceeEEEECCCChHHHHHHHHH
Confidence 1221 13444444444443322111 111111 01244567889999999999998 685 567899
Q ss_pred HHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-cchhhHhhcCCCCccEEEeecCHHHHHHHHh
Q 005074 422 SLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKE 499 (715)
Q Consensus 422 ~~ALaaGN~vvlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~ 499 (715)
+|||++||+||+|||+.||+++..+++++.+ + +|+|++|+|++ +.++++.|..||++|+|+||||+.+|+.|++
T Consensus 142 ~~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~----aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~ 217 (456)
T cd07110 142 APALAAGCTVVLKPSELTSLTELELAEIAAE----AGLPPGVLNVVTGTGDEAGAPLAAHPGIDKISFTGSTATGSQVMQ 217 (456)
T ss_pred HHHHHcCCEEEEECcccchHHHHHHHHHHHH----cCCCCCcEEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHH
Confidence 9999999999999999999999999999986 8 99999999996 5567888889999999999999999999998
Q ss_pred hcC---CCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccCchhHHHHHHHHHhcC-----
Q 005074 500 STK---IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEG----- 570 (715)
Q Consensus 500 ~a~---~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~f~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~----- 570 (715)
+++ +|+++|||||||+||++|||+|.|++.+++++|.|+| .|+|++|+|||+++| |+|+++|+++++++.
T Consensus 218 ~aa~~~~~~~lElgG~~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~g~p~ 296 (456)
T cd07110 218 AAAQDIKPVSLELGGKSPIIVFDDADLEKAVEWAMFGCFWNNGQICSATSRLLVHESIA-DAFLERLATAAEAIRVGDPL 296 (456)
T ss_pred HHhhcCCeEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCceEEEcHHHH-HHHHHHHHHHHHhcCCCCCC
Confidence 774 8999999999999999999999999999999999987 999999999999999 799999999987652
Q ss_pred -----------------------------CeE-ecCccc----ccc-c-c-C-----CCCCCccccccCceEEEEEeCCH
Q 005074 571 -----------------------------VGL-FGGPRA----SKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVDDV 608 (715)
Q Consensus 571 -----------------------------~~~-~g~~~~----~~~-~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~ 608 (715)
+++ .|+... .++ + | | +++++++||+||||++|++|+|+
T Consensus 297 ~~~~~~Gpli~~~~~~~~~~~v~~a~~~Ga~~~~gg~~~~~~~~~~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~ 376 (456)
T cd07110 297 EEGVRLGPLVSQAQYEKVLSFIARGKEEGARLLCGGRRPAHLEKGYFIAPTVFADVPTDSRIWREEIFGPVLCVRSFATE 376 (456)
T ss_pred CCCCCcCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCCcccccCCCCcCCCEEEecCCCCChHhhCCCcCCeEEEEecCCH
Confidence 111 233221 233 3 5 2 35789999999999999999999
Q ss_pred HHHHHHHHhcCCCceeEEEecCHHHHHHHHHhcCcceEEEcCCCCCCCCCccCCcccccccccccccccccccccceEEE
Q 005074 609 RAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTR 688 (715)
Q Consensus 609 deAi~~aN~~~~GL~a~i~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~~~pfG~g~~sG~~~~~~~~~g~~gl~~ft~~K 688 (715)
||||+++|+++|||++||||+|.+++.++++++++|+|+||+++...+.+||||.|.||+| +++|++|+++||+.|
T Consensus 377 ~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G----~~~g~~~l~~~~~~k 452 (456)
T cd07110 377 DEAIALANDSEYGLAAAVISRDAERCDRVAEALEAGIVWINCSQPCFPQAPWGGYKRSGIG----RELGEWGLDNYLEVK 452 (456)
T ss_pred HHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCcccccCC----ccchHHHHHHhccee
Confidence 9999999999999999999999999999999999999999987766677899999999985 356999999999999
Q ss_pred EEE
Q 005074 689 WIL 691 (715)
Q Consensus 689 ~v~ 691 (715)
+|+
T Consensus 453 ~i~ 455 (456)
T cd07110 453 QIT 455 (456)
T ss_pred EEe
Confidence 985
No 42
>PLN00412 NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional
Probab=100.00 E-value=9e-73 Score=637.57 Aligned_cols=404 Identities=18% Similarity=0.196 Sum_probs=335.6
Q ss_pred hHHHHHcCCcceeEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
Q 005074 266 SIIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQ 345 (715)
Q Consensus 266 ~l~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~ 345 (715)
.+.+|.+|+.++++..++ .+|+++++++|++||+.|+.++..+|.++|++++++|++|+++|++++++|++++.
T Consensus 34 ~~~~P~t~~~i~~~~~a~------~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~el~~~~~~e~Gk~~ 107 (496)
T PLN00412 34 AITNPSTRKTQYKVQACT------QEEVNKAMESAKAAQKAWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPA 107 (496)
T ss_pred EeECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH
Confidence 346788999999988888 89999999999999999999999999999999999999999999999998887653
Q ss_pred hhchhHHHHHHhhcChhHHHHHHHHHHHHhcccccccccccccccC---CCeEEEEeeeceeEEEEEcCC-Chh-hHHHH
Q 005074 346 EAGYAKSLVSRLALKPGKISSLAKSIRILADMEEPIGQILKRTELA---DGLILEKTSCPLGVLLIVFES-RPD-ALVQI 420 (715)
Q Consensus 346 ~~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~ 420 (715)
. ++. .++......+++++.....+... +...+....+ .+...+++|+|+|||++|+|| ||. +++++
T Consensus 108 ~----~a~-~Ev~~~~~~l~~~a~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~ 178 (496)
T PLN00412 108 K----DAV-TEVVRSGDLISYTAEEGVRILGE----GKFLVSDSFPGNERNKYCLTSKIPLGVVLAIPPFNYPVNLAVSK 178 (496)
T ss_pred H----HHH-HHHHHHHHHHHHHHHHHHHHhcC----CcccccccCCCccCCceeEEEEecceEEEEECCCCchHHHHHHH
Confidence 2 222 12222233344444333332211 1111100001 122456889999999999998 674 67899
Q ss_pred HHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-cchhhHhhcCCCCccEEEeecCHHHHHHHH
Q 005074 421 ASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIK 498 (715)
Q Consensus 421 ~~~ALaaGN~vvlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~ 498 (715)
++|||++||+||+|||+.+|.++..+++++.+ + +|+|++|+|++ +.+++++|..||+||+|+|||| .+|+.|+
T Consensus 179 i~~ALaaGN~VIlKPs~~t~~~~~~l~~~l~~----aglP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs-~~g~~v~ 253 (496)
T PLN00412 179 IAPALIAGNAVVLKPPTQGAVAALHMVHCFHL----AGFPKGLISCVTGKGSEIGDFLTMHPGVNCISFTGG-DTGIAIS 253 (496)
T ss_pred HHHHHHcCCEEEEECCccCcHHHHHHHHHHHH----hCCCcccEEEEecCchHHHHHHhcCCCcCEEEEeCh-HHHHHHH
Confidence 99999999999999999999999999999986 7 99999999996 5568888999999999999999 9999999
Q ss_pred hhc-CCCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccCchhHHHHHHHHHhcCCe----
Q 005074 499 EST-KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGVG---- 572 (715)
Q Consensus 499 ~~a-~~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~f~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~~---- 572 (715)
+++ .+|+++|||||||+||++|||+|.|++.+++++|.|+| .|+|++|+|||++|| |+|+++|+++++++.+.
T Consensus 254 ~~a~~~~~~lElGG~~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~g~p~~ 332 (496)
T PLN00412 254 KKAGMVPLQMELGGKDACIVLEDADLDLAAANIIKGGFSYSGQRCTAVKVVLVMESVA-DALVEKVNAKVAKLTVGPPED 332 (496)
T ss_pred HHhCCCcEEEEcCCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCCccCeEEEEcHHHH-HHHHHHHHHHHHhCccCCCcc
Confidence 877 48999999999999999999999999999999999987 999999999999999 79999999999876421
Q ss_pred -----------------------------Ee-cCccccccc-c-C-----CCCCCccccccCceEEEEEeCCHHHHHHHH
Q 005074 573 -----------------------------LF-GGPRASKLL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHI 615 (715)
Q Consensus 573 -----------------------------~~-g~~~~~~~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~a 615 (715)
+. |+.....++ | | +++++++||+||||++|++|+|+||||+++
T Consensus 333 ~~~~gp~i~~~~~~~v~~~i~~a~~~Ga~~l~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~~deai~~a 412 (496)
T PLN00412 333 DCDITPVVSESSANFIEGLVMDAKEKGATFCQEWKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHC 412 (496)
T ss_pred cCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEecCCCCCeEEecEEEeCCCCCCHHHhCcCCCCeEEEEEeCCHHHHHHHH
Confidence 11 111111122 5 2 368999999999999999999999999999
Q ss_pred HhcCCCceeEEEecCHHHHHHHHHhcCcceEEEcCCCC-CCCCCccCCcccccccccccccccccccccceEEEEEEEcC
Q 005074 616 HQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTR-FCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGN 694 (715)
Q Consensus 616 N~~~~GL~a~i~t~d~~~~~~~~~~l~~G~V~iN~~~~-~~~~~pfG~g~~sG~~~~~~~~~g~~gl~~ft~~K~v~~~~ 694 (715)
|+++|||++||||+|.+++++|++++++|+|+||++.. ..+.+||||.|.||+|+ ++|++|+++||+.|++++..
T Consensus 413 n~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~~~PfGG~k~SG~G~----~~g~~~~~~ft~~k~i~~~~ 488 (496)
T PLN00412 413 NASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPARGPDHFPFQGLKDSGIGS----QGITNSINMMTKVKSTVINL 488 (496)
T ss_pred hCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCCCCccccccCC----CChHHHHHHhcceEEEEEec
Confidence 99999999999999999999999999999999999864 34578999999999863 46899999999999998764
No 43
>cd07097 ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like. Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group.
Probab=100.00 E-value=6.2e-73 Score=637.79 Aligned_cols=398 Identities=20% Similarity=0.195 Sum_probs=338.6
Q ss_pred hHHHHHc-CCcceeEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
Q 005074 266 SIIKVLE-GKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAA 344 (715)
Q Consensus 266 ~l~~~~t-g~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~ 344 (715)
.+.+|.+ ++.++++..++ .+|+++|+++|++||+.|+++|.++|.++|++++++|++|+++|++++++|.+++
T Consensus 17 ~v~~P~~~~~~i~~~~~~~------~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~ 90 (473)
T cd07097 17 ENRNPSDTSDVVGKYARAS------AEDADAAIAAAAAAFPAWRRTSPEARADILDKAGDELEARKEELARLLTREEGKT 90 (473)
T ss_pred eeECCCCCCeEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCC
Confidence 3467884 99999998888 8999999999999999999999999999999999999999999999988776554
Q ss_pred HhhchhHHHHHHhhcChhHHHHHHHHHHHHhcccc-cccccccccccCCCeEEEEeeeceeEEEEEcCC-Chh-hHHHHH
Q 005074 345 QEAGYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIA 421 (715)
Q Consensus 345 ~~~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~ 421 (715)
.. ++ ..|+..+++.+++++...+ ..|...+. ...+...+++++|+|||++|+|| ||. ++++++
T Consensus 91 ~~----~a--------~~ev~~~~~~l~~~a~~~~~~~g~~~~~--~~~~~~~~~~~~P~GVv~~I~P~N~Pl~~~~~~i 156 (473)
T cd07097 91 LP----EA--------RGEVTRAGQIFRYYAGEALRLSGETLPS--TRPGVEVETTREPLGVVGLITPWNFPIAIPAWKI 156 (473)
T ss_pred HH----HH--------HHHHHHHHHHHHHHHHHHHHhcCccccc--CCCCceEEEEEEeeeeEEEEcccChHHHHHHHHH
Confidence 21 22 1256666777776664332 22322211 11244567899999999999998 685 567999
Q ss_pred HHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-cchhhHhhcCCCCccEEEeecCHHHHHHHHh
Q 005074 422 SLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKE 499 (715)
Q Consensus 422 ~~ALaaGN~vvlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~ 499 (715)
+|||++||+||+|||+.+|+++..+++++.+ + ||+|++|+|++ +.++++.|..||+||+|+||||+.+|+.|++
T Consensus 157 ~~ALaaGN~VIlKps~~~p~~~~~l~~~~~~----aGlP~gvv~vv~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~ 232 (473)
T cd07097 157 APALAYGNTVVFKPAELTPASAWALVEILEE----AGLPAGVFNLVMGSGSEVGQALVEHPDVDAVSFTGSTAVGRRIAA 232 (473)
T ss_pred HHHHHcCCEEEEeCCCCCcHHHHHHHHHHHH----cCCCCcceEEeccCchHHHHHHhcCCCCCEEEEECcHHHHHHHHH
Confidence 9999999999999999999999999999986 8 99999999996 5568888889999999999999999999988
Q ss_pred hc---CCCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccCchhHHHHHHHHHhcCC----
Q 005074 500 ST---KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV---- 571 (715)
Q Consensus 500 ~a---~~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~f~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~---- 571 (715)
++ .||+++|||||||+||++|||+|.|++.+++++|.|+| .|+|++|+|||+++| |+|+++|+++++++.+
T Consensus 233 ~aa~~~~~~~lElGGk~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~g~p~ 311 (473)
T cd07097 233 AAAARGARVQLEMGGKNPLVVLDDADLDLAVECAVQGAFFSTGQRCTASSRLIVTEGIH-DRFVEALVERTKALKVGDAL 311 (473)
T ss_pred HHhccCCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCcCCeeEEEehhHH-HHHHHHHHHHHHhCCCCCCC
Confidence 77 38999999999999999999999999999999999987 999999999999999 7999999999987632
Q ss_pred ------------------------------eE-ecCccc----ccc-c-c-C-----CCCCCccccccCceEEEEEeCCH
Q 005074 572 ------------------------------GL-FGGPRA----SKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVDDV 608 (715)
Q Consensus 572 ------------------------------~~-~g~~~~----~~~-~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~ 608 (715)
++ .|+... .++ + | | +++++++||+||||++|++|+|+
T Consensus 312 ~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~ 391 (473)
T cd07097 312 DEGVDIGPVVSERQLEKDLRYIEIARSEGAKLVYGGERLKRPDEGYYLAPALFAGVTNDMRIAREEIFGPVAAVIRVRDY 391 (473)
T ss_pred CCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCCeEEeeEEeccCCCCChhhhCCCcCceEEEeccCCH
Confidence 11 233221 133 3 5 2 35899999999999999999999
Q ss_pred HHHHHHHHhcCCCceeEEEecCHHHHHHHHHhcCcceEEEcCCCCC-CCCCccCCcccccccccccccccccccccceEE
Q 005074 609 RAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRF-CDGARFGLGAEVGISTSRIHARGPVGVEGLLTT 687 (715)
Q Consensus 609 deAi~~aN~~~~GL~a~i~t~d~~~~~~~~~~l~~G~V~iN~~~~~-~~~~pfG~g~~sG~~~~~~~~~g~~gl~~ft~~ 687 (715)
||||+++|+++|||++||||+|.++++++++++++|+|+||+++.. .+.+||||.+.||+|. +++|++|+++||+.
T Consensus 392 ~eai~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~~g~v~iN~~~~~~~~~~PfGG~~~SG~G~---~~~g~~~l~~f~~~ 468 (473)
T cd07097 392 DEALAIANDTEFGLSAGIVTTSLKHATHFKRRVEAGVVMVNLPTAGVDYHVPFGGRKGSSYGP---REQGEAALEFYTTI 468 (473)
T ss_pred HHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCcccccCcc---cCCcHHHHHHhhce
Confidence 9999999999999999999999999999999999999999987654 3578999999999851 24689999999999
Q ss_pred EEEE
Q 005074 688 RWIL 691 (715)
Q Consensus 688 K~v~ 691 (715)
|+|.
T Consensus 469 k~v~ 472 (473)
T cd07097 469 KTVY 472 (473)
T ss_pred eEEe
Confidence 9985
No 44
>cd07152 ALDH_BenzADH NAD-dependent benzaldehyde dehydrogenase II-like. NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids.
Probab=100.00 E-value=1.2e-72 Score=631.23 Aligned_cols=390 Identities=20% Similarity=0.233 Sum_probs=331.1
Q ss_pred CCcceeEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhhchhHH
Q 005074 273 GKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKS 352 (715)
Q Consensus 273 g~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~g~~~~ 352 (715)
|+.++++..++ .+|+++++++|++||+.|+++|.++|.++|++++++|++|+++|++++++|+++... ++
T Consensus 1 ~~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~----~a 70 (443)
T cd07152 1 GAVLGEVGVAD------AADVDRAAARAAAAQRAWAATPPRERAAVLRRAADLLEEHADEIADWIVRESGSIRP----KA 70 (443)
T ss_pred CCEEEEEcCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHH----HH
Confidence 35678888778 899999999999999999999999999999999999999999999999877654321 11
Q ss_pred HHHHhhcChhHHHHHHHHHHHHhccc-ccccccccccccCCCeEEEEeeeceeEEEEEcCC-Chh-hHHHHHHHHHHhCC
Q 005074 353 LVSRLALKPGKISSLAKSIRILADME-EPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGN 429 (715)
Q Consensus 353 ~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGN 429 (715)
..|+..+++.+++++... ++.+...+. ..+...+.+|+|+|||++|+|| +|. +.+++++|||++||
T Consensus 71 --------~~ev~~~i~~l~~~~~~~~~~~~~~~~~---~~g~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN 139 (443)
T cd07152 71 --------GFEVGAAIGELHEAAGLPTQPQGEILPS---APGRLSLARRVPLGVVGVISPFNFPLILAMRSVAPALALGN 139 (443)
T ss_pred --------HHHHHHHHHHHHHHHHhHHHhCCccccc---cCCceeEEEEecceEEEEECCCCcHHHHHHHHHHHHHHcCC
Confidence 236777777777776543 233333221 1344567889999999999998 685 56799999999999
Q ss_pred EEEEeCCcchHHHH-HHHHHHHHHhcccc-cCcCceEEecCcchhhHhhcCCCCccEEEeecCHHHHHHHHhhcC---CC
Q 005074 430 GLLLKGGKEAMRSN-AILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK---IP 504 (715)
Q Consensus 430 ~vvlKps~~tp~t~-~~l~~~~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a~---~~ 504 (715)
+||+|||+.+|.++ ..+++++.+ + +|+|++|+|+++.+++..|..||++|+|+||||+.+|+.|+++++ ||
T Consensus 140 ~VvlKps~~~p~~~~~~l~~~~~~----ag~P~gvv~~v~g~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~ 215 (443)
T cd07152 140 AVVLKPDPRTPVSGGVVIARLFEE----AGLPAGVLHVLPGGADAGEALVEDPNVAMISFTGSTAVGRKVGEAAGRHLKK 215 (443)
T ss_pred EEEEECCcccchhHHHHHHHHHHH----hCcCcCcEEEecCChHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCc
Confidence 99999999999996 688888886 7 999999999975567888889999999999999999999988763 89
Q ss_pred EEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccCchhHHHHHHHHHhcCCe-----------
Q 005074 505 VLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGVG----------- 572 (715)
Q Consensus 505 ~~lElGGk~p~iV~~dADl~~A~~~iv~~~f~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~~----------- 572 (715)
+++|||||||+||++|||+|.|++.+++++|.|+| .|++++|||||+++| |+|+++|+++++++.+.
T Consensus 216 ~~lElGGk~~~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-~~f~~~l~~~~~~~~~g~p~~~~~~~gp 294 (443)
T cd07152 216 VSLELGGKNALIVLDDADLDLAASNGAWGAFLHQGQICMAAGRHLVHESVA-DAYTAKLAAKAKHLPVGDPATGQVALGP 294 (443)
T ss_pred EEEECCCCCeEEECCCCCHHHHHHHHHHHHHhhcCCCCcCCeeEEEcHHHH-HHHHHHHHHHHHhCCCCCCCCCCCCcCC
Confidence 99999999999999999999999999999999987 999999999999999 79999999999876321
Q ss_pred -----------------------E-ecCccccccc-c-C-----CCCCCccccccCceEEEEEeCCHHHHHHHHHhcCCC
Q 005074 573 -----------------------L-FGGPRASKLL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSA 621 (715)
Q Consensus 573 -----------------------~-~g~~~~~~~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~G 621 (715)
+ .|+.....++ | | +++++++||+||||++|++|+|+||||+++|+++||
T Consensus 295 li~~~~~~~v~~~i~~a~~~Ga~vl~gg~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~g 374 (443)
T cd07152 295 LINARQLDRVHAIVDDSVAAGARLEAGGTYDGLFYRPTVLSGVKPGMPAFDEEIFGPVAPVTVFDSDEEAVALANDTEYG 374 (443)
T ss_pred CcCHHHHHHHHHHHHHHHhCCCEEEeccCcCCEEEcCEEEecCCCCChhhhccccCCeEEEEeeCCHHHHHHHHhCCCcc
Confidence 1 1221111123 5 2 358999999999999999999999999999999999
Q ss_pred ceeEEEecCHHHHHHHHHhcCcceEEEcCCCCCC-CCCccCCcccccccccccccccccccccceEEEEEE
Q 005074 622 HTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFC-DGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 691 (715)
Q Consensus 622 L~a~i~t~d~~~~~~~~~~l~~G~V~iN~~~~~~-~~~pfG~g~~sG~~~~~~~~~g~~gl~~ft~~K~v~ 691 (715)
|++||||+|.++++++++++++|.|+||+++... +.+||||.|.||+|. +++|++|+++||+.|++.
T Consensus 375 L~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~pfGG~~~SG~G~---~~~g~~~l~~~~~~k~~~ 442 (443)
T cd07152 375 LSAGIISRDVGRAMALADRLRTGMLHINDQTVNDEPHNPFGGMGASGNGS---RFGGPANWEEFTQWQWVT 442 (443)
T ss_pred ceEEEECCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCcccccCCC---ccCcHHHHHHhhceeEEe
Confidence 9999999999999999999999999999876654 568999999998851 346899999999999975
No 45
>cd07101 ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like. Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s).
Probab=100.00 E-value=1.1e-72 Score=633.06 Aligned_cols=395 Identities=16% Similarity=0.160 Sum_probs=329.5
Q ss_pred HHHcCCcceeEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhhc
Q 005074 269 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAG 348 (715)
Q Consensus 269 ~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~g 348 (715)
+|+||+.++++..++ .+|+++++++|++||+.|+++|.++|.++|++++++|++|+++|++++.+|++++..
T Consensus 2 ~P~tg~~i~~~~~~~------~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~-- 73 (454)
T cd07101 2 APFTGEPLGELPQST------PADVEAAFARARAAQRAWAARPFAERAAVFLRFHDLVLERRDELLDLIQLETGKARR-- 73 (454)
T ss_pred cCCCCCEEEEEcCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHH--
Confidence 578999999998888 899999999999999999999999999999999999999999999999888766532
Q ss_pred hhHHHHHHhhcChhHHHHHHHHHHHHhcccccccccccccccCCCeEEEEeeeceeEEEEEcCC-Chh-hHHHHHHHHHH
Q 005074 349 YAKSLVSRLALKPGKISSLAKSIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIR 426 (715)
Q Consensus 349 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALa 426 (715)
++. .++......+++++..++.+.+... .+. ..+.....+++++|+|||++|+|| +|. +++++++|||+
T Consensus 74 --~a~-~ev~~~~~~~~~~~~~~~~~~~~~~-----~~~-~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~ALa 144 (454)
T cd07101 74 --HAF-EEVLDVAIVARYYARRAERLLKPRR-----RRG-AIPVLTRTTVNRRPKGVVGVISPWNYPLTLAVSDAIPALL 144 (454)
T ss_pred --HHH-HHHHHHHHHHHHHHHHHHHHhCCcc-----ccc-cCCCCceEEEEEEeccEEEEECCCccHHHHHHHHHHHHHH
Confidence 221 1222223334444444443322111 110 001123567889999999999998 684 67899999999
Q ss_pred hCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-cchhhHhhcCCCCccEEEeecCHHHHHHHHhhcC--
Q 005074 427 SGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK-- 502 (715)
Q Consensus 427 aGN~vvlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a~-- 502 (715)
+||+||+|||+.||+++..+++++.+ + ||+|++|+|++ +.++++.|.+| +|+|+||||+.+|+.|+++++
T Consensus 145 aGN~vvlKps~~~p~~~~~l~~~~~~----aglP~gv~~~v~g~~~~~~~~l~~~--~~~V~fTGs~~~g~~i~~~aa~~ 218 (454)
T cd07101 145 AGNAVVLKPDSQTALTALWAVELLIE----AGLPRDLWQVVTGPGSEVGGAIVDN--ADYVMFTGSTATGRVVAERAGRR 218 (454)
T ss_pred cCCEEEEECCccchHHHHHHHHHHHH----cCcCCCcEEEEeCCcHHHHHHHHhC--CCEEEEECCHHHHHHHHHHHHhc
Confidence 99999999999999999999999986 8 99999999996 56677877776 689999999999999998773
Q ss_pred -CCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccCchhHHHHHHHHHhcCC---------
Q 005074 503 -IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV--------- 571 (715)
Q Consensus 503 -~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~f~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~--------- 571 (715)
+|+++|||||||+||++|||||.|++.+++|+|.|+| .|+|++|||||+++| |+|+++|+++++++.+
T Consensus 219 ~~~~~lElgG~~p~iV~~dAdl~~a~~~i~~~~~~~sGQ~C~a~~rv~V~~~i~-d~f~~~L~~~~~~~~~G~~~~~~~~ 297 (454)
T cd07101 219 LIGCSLELGGKNPMIVLEDADLDKAAAGAVRACFSNAGQLCVSIERIYVHESVY-DEFVRRFVARTRALRLGAALDYGPD 297 (454)
T ss_pred CCcEEEECCCCceEEECCCCCHHHHHHHHHHHHHhcCCCCcccCeEEEEcHHHH-HHHHHHHHHHHhhCCCCCCCCCCCC
Confidence 8999999999999999999999999999999999976 999999999999999 7999999999887631
Q ss_pred -------------------------eE-ecCccc---cc-cc-c-C-----CCCCCccccccCceEEEEEeCCHHHHHHH
Q 005074 572 -------------------------GL-FGGPRA---SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDH 614 (715)
Q Consensus 572 -------------------------~~-~g~~~~---~~-~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~ 614 (715)
++ .|+... .+ ++ | | +++++++||+||||++|++|+|+||||++
T Consensus 298 ~gpli~~~~~~~v~~~v~~a~~~Ga~vl~gg~~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~ 377 (454)
T cd07101 298 MGSLISQAQLDRVTAHVDDAVAKGATVLAGGRARPDLGPYFYEPTVLTGVTEDMELFAEETFGPVVSIYRVADDDEAIEL 377 (454)
T ss_pred cCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCeEEcCEEEeCCCCCCHHHhCCCCCceEEEEeeCCHHHHHHH
Confidence 12 233211 12 33 5 2 35789999999999999999999999999
Q ss_pred HHhcCCCceeEEEecCHHHHHHHHHhcCcceEEEcCCCCC---CCCCccCCcccccccccccccccccccccceEEEEEE
Q 005074 615 IHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRF---CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 691 (715)
Q Consensus 615 aN~~~~GL~a~i~t~d~~~~~~~~~~l~~G~V~iN~~~~~---~~~~pfG~g~~sG~~~~~~~~~g~~gl~~ft~~K~v~ 691 (715)
+|+++|||++||||+|.+++.++++++++|+|+||++... .+.+||||.|.||+| +++|++|+++||+.|+++
T Consensus 378 ~n~~~~gL~~~i~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~~~PfgG~k~SG~G----~~~g~~~~~~~~~~k~v~ 453 (454)
T cd07101 378 ANDTDYGLNASVWTRDGARGRRIAARLRAGTVNVNEGYAAAWASIDAPMGGMKDSGLG----RRHGAEGLLKYTETQTVA 453 (454)
T ss_pred HhCCCCCceEEEEcCCHHHHHHHHHhcCcceEEECCCCCcCcCCCCCCCCcccccccC----ccchHHHHHHhcceEEEe
Confidence 9999999999999999999999999999999999986542 356899999999986 346999999999999986
No 46
>cd07145 ALDH_LactADH_F420-Bios Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like. NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD.
Probab=100.00 E-value=9.6e-73 Score=634.20 Aligned_cols=398 Identities=19% Similarity=0.249 Sum_probs=336.0
Q ss_pred HHHHcCCcceeEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhh
Q 005074 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 347 (715)
Q Consensus 268 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~ 347 (715)
.+|.+|+.++++...+ .+|+++++++|++||+.|+++|.++|.++|++++++|++|+++|++++.+|++++..
T Consensus 4 ~~P~t~~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~- 76 (456)
T cd07145 4 RNPANGEVIDTVPSLS------REEVREAIEVAEKAKDVMSNLPAYKRYKILMKVAELIERRKEELAKLLTIEVGKPIK- 76 (456)
T ss_pred cCCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHH-
Confidence 4678899999998888 899999999999999999999999999999999999999999999998877654321
Q ss_pred chhHHHHHHhhcChhHHHHHHHHHHHHhcccc-cccccccccc--cCCCeEEEEeeeceeEEEEEcCC-Chh-hHHHHHH
Q 005074 348 GYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTE--LADGLILEKTSCPLGVLLIVFES-RPD-ALVQIAS 422 (715)
Q Consensus 348 g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~g~~~~~~~--~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~ 422 (715)
++. .|++.+++.++++++..+ ..+...+... ...+...+++++|+|||++|+|| +|. +.+++++
T Consensus 77 ---~a~--------~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~ 145 (456)
T cd07145 77 ---QSR--------VEVERTIRLFKLAAEEAKVLRGETIPVDAYEYNERRIAFTVREPIGVVGAITPFNFPANLFAHKIA 145 (456)
T ss_pred ---HHH--------HHHHHHHHHHHHHHHHHHHhcCccccCccccccCCceeEEEEecceeEEEECCCChHHHHHHHHHH
Confidence 221 255666666666554321 1222211100 00133467889999999999998 585 5678999
Q ss_pred HHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-cchhhHhhcCCCCccEEEeecCHHHHHHHHhh
Q 005074 423 LAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKES 500 (715)
Q Consensus 423 ~ALaaGN~vvlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~ 500 (715)
+||++||+||+|||+.+|+++..+++++++ + +|+|++|+|++ +.++++.|..||++++|+||||+.+|+.|+++
T Consensus 146 ~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~----ag~p~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~ 221 (456)
T cd07145 146 PAIAVGNSVVVKPSSNTPLTAIELAKILEE----AGLPPGVINVVTGYGSEVGDEIVTNPKVNMISFTGSTAVGLLIASK 221 (456)
T ss_pred HHHHcCCEEEEECCccchHHHHHHHHHHHH----cCCCcccEEEEeCCCchHHHHHhcCCCCCEEEEECCHHHHHHHHHH
Confidence 999999999999999999999999999987 7 99999999996 56788888899999999999999999999987
Q ss_pred cC---CCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccCchhHHHHHHHHHhcCC-----
Q 005074 501 TK---IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV----- 571 (715)
Q Consensus 501 a~---~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~f~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~----- 571 (715)
+. +|+++|||||||+||++|||+|.|++.+++++|.|+| .|++++|||||+++| |+|+++|+++++++.+
T Consensus 222 aa~~~~~v~lElgG~n~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~g~p~~ 300 (456)
T cd07145 222 AGGTGKKVALELGGSDPMIVLKDADLERAVSIAVRGRFENAGQVCNAVKRILVEEEVY-DKFLKLLVEKVKKLKVGDPLD 300 (456)
T ss_pred HhhcCCceEEecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCccCeeEEEcHHHH-HHHHHHHHHHHhcCCcCCCCC
Confidence 74 9999999999999999999999999999999999987 999999999999999 7999999999887632
Q ss_pred -----------------------------eE-ecCccccc-cc-c-C-----CCCCCccccccCceEEEEEeCCHHHHHH
Q 005074 572 -----------------------------GL-FGGPRASK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAID 613 (715)
Q Consensus 572 -----------------------------~~-~g~~~~~~-~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi~ 613 (715)
++ .|+....+ ++ | | +++++++||+||||++|++|+|+||||+
T Consensus 301 ~~~~~gpli~~~~~~~~~~~i~~a~~~ga~vl~gg~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~ 380 (456)
T cd07145 301 ESTDLGPLISPEAVERMENLVNDAVEKGGKILYGGKRDEGSFFPPTVLENDTPDMIVMKEEVFGPVLPIAKVKDDEEAVE 380 (456)
T ss_pred CCCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCeEECCEeecCCCCCChHhhCCCCCceEEEEEECCHHHHHH
Confidence 11 12222212 23 5 3 3688999999999999999999999999
Q ss_pred HHHhcCCCceeEEEecCHHHHHHHHHhcCcceEEEcCCCCCC-CCCccCCcccccccccccccccccccccceEEEEEEE
Q 005074 614 HIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFC-DGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILR 692 (715)
Q Consensus 614 ~aN~~~~GL~a~i~t~d~~~~~~~~~~l~~G~V~iN~~~~~~-~~~pfG~g~~sG~~~~~~~~~g~~gl~~ft~~K~v~~ 692 (715)
++|+++|||++||||+|.+++.++++++++|+|+||+.+... +.+||||.+.||+| +++|++|+++|++.|+|.+
T Consensus 381 ~~n~~~~gL~~~v~t~d~~~~~~~~~~~~~g~v~vN~~~~~~~~~~pfgG~~~SG~G----~~~g~~~l~~f~~~k~v~~ 456 (456)
T cd07145 381 IANSTEYGLQASVFTNDINRALKVARELEAGGVVINDSTRFRWDNLPFGGFKKSGIG----REGVRYTMLEMTEEKTIVI 456 (456)
T ss_pred HHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCcccccCC----cCchHHHHHHhhceeEEeC
Confidence 999999999999999999999999999999999999876543 57899999999986 3569999999999999863
No 47
>cd07147 ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1-like. Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD.
Probab=100.00 E-value=1.2e-72 Score=633.12 Aligned_cols=398 Identities=22% Similarity=0.257 Sum_probs=332.8
Q ss_pred HHHHcCCcceeEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhh
Q 005074 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 347 (715)
Q Consensus 268 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~ 347 (715)
.+|.+|+.++++..++ .+|+++++++|++||+.|+++|.++|.++|++++++|++|+++|++++.+|++++..
T Consensus 4 ~~P~t~~~~~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~- 76 (452)
T cd07147 4 TNPYTGEVVARVALAG------PDDIEEAIAAAVKAFRPMRALPAHRRAAILLHCVARLEERFEELAETIVLEAGKPIK- 76 (452)
T ss_pred cCCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH-
Confidence 5688999999998888 899999999999999999999999999999999999999999999988877654321
Q ss_pred chhHHHHHHhhcChhHHHHHHHHHHHHhcccc-cccccccccc--cCCCeEEEEeeeceeEEEEEcCC-Chh-hHHHHHH
Q 005074 348 GYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTE--LADGLILEKTSCPLGVLLIVFES-RPD-ALVQIAS 422 (715)
Q Consensus 348 g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~g~~~~~~~--~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~ 422 (715)
++. .|+...+..++++++... ..++..+... ...+...+++++|+|||++|+|| +|. +.+++++
T Consensus 77 ---~a~--------~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~ 145 (452)
T cd07147 77 ---DAR--------GEVARAIDTFRIAAEEATRIYGEVLPLDISARGEGRQGLVRRFPIGPVSAITPFNFPLNLVAHKVA 145 (452)
T ss_pred ---HHH--------HHHHHHHHHHHHHHHHHHHhCCcccccccccCCCCceeEEEEeceeEEEEEcCCCcHHHHHHHHHH
Confidence 221 244444444554443221 1122111000 01234556789999999999998 585 6778999
Q ss_pred HHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecCcchhhHhhcCCCCccEEEeecCHHHHHHHHhhc
Q 005074 423 LAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST 501 (715)
Q Consensus 423 ~ALaaGN~vvlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a 501 (715)
+||++||+||+|||+.+|.++..+++++++ + +|+|+||+++++.+.+..|..||++|+|+||||+.+|+.|++.+
T Consensus 146 ~ALaaGN~VIlKps~~~p~~~~~l~~~l~~----ag~P~g~v~~v~g~~~~~~~l~~~~~v~~v~fTGs~~~g~~v~~~a 221 (452)
T cd07147 146 PAIAAGCPFVLKPASRTPLSALILGEVLAE----TGLPKGAFSVLPCSRDDADLLVTDERIKLLSFTGSPAVGWDLKARA 221 (452)
T ss_pred HHHHcCCEEEEECCCCCcHHHHHHHHHHHH----cCCCcCcEEEEeCCccchhHHhcCCCCCEEEEECCHHHHHHHHHHh
Confidence 999999999999999999999999999987 7 99999999996445677888899999999999999999999876
Q ss_pred C-CCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccCchhHHHHHHHHHhcCCe-------
Q 005074 502 K-IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGVG------- 572 (715)
Q Consensus 502 ~-~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~f~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~~------- 572 (715)
+ +|+++|||||||+||++|||+|.|++.+++++|.|+| .|++++|+|||+++| |+|+++|+++++++...
T Consensus 222 ~~~~v~lelgG~~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~-d~f~~~L~~~~~~~~~g~p~~~~~ 300 (452)
T cd07147 222 GKKKVVLELGGNAAVIVDSDADLDFAAQRIIFGAFYQAGQSCISVQRVLVHRSVY-DEFKSRLVARVKALKTGDPKDDAT 300 (452)
T ss_pred CcCceEeecCCCCcEEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEchhHH-HHHHHHHHHHHHhCCCCCCCCCCC
Confidence 4 7999999999999999999999999999999999987 999999999999999 79999999999876321
Q ss_pred ---------------------------E-ecCccccccc-c-C-----CCCCCccccccCceEEEEEeCCHHHHHHHHHh
Q 005074 573 ---------------------------L-FGGPRASKLL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQ 617 (715)
Q Consensus 573 ---------------------------~-~g~~~~~~~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~ 617 (715)
+ .|+.....++ | | +++++++||+||||++|++|+|+||||+++|+
T Consensus 301 ~~gpli~~~~~~~~~~~i~~a~~~Ga~~l~gg~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~n~ 380 (452)
T cd07147 301 DVGPMISESEAERVEGWVNEAVDAGAKLLTGGKRDGALLEPTILEDVPPDMEVNCEEVFGPVVTVEPYDDFDEALAAVND 380 (452)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHCCCEEEecCCcCCEEEcCEEEeCCCCCChHHhCcCcCCeEEEEEeCCHHHHHHHHhC
Confidence 1 1221111123 5 2 35889999999999999999999999999999
Q ss_pred cCCCceeEEEecCHHHHHHHHHhcCcceEEEcCCCCC-CCCCccCCcccccccccccccccccccccceEEEEEEE
Q 005074 618 HGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRF-CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILR 692 (715)
Q Consensus 618 ~~~GL~a~i~t~d~~~~~~~~~~l~~G~V~iN~~~~~-~~~~pfG~g~~sG~~~~~~~~~g~~gl~~ft~~K~v~~ 692 (715)
++|||++||||+|.++++++++++++|+|+||+++.. .+..||||.|+||+| +++|++|+++||+.|+|++
T Consensus 381 ~~~gL~~~v~t~d~~~a~~~~~~~~~G~v~vN~~~~~~~~~~pfGG~~~SG~G----~~~g~~~~~~~~~~k~i~~ 452 (452)
T cd07147 381 SKFGLQAGVFTRDLEKALRAWDELEVGGVVINDVPTFRVDHMPYGGVKDSGIG----REGVRYAIEEMTEPRLLVI 452 (452)
T ss_pred CCCCceEEEECCCHHHHHHHHHHcCcceEEECCCCCCCCCCCCcCCccccccC----CCChHHHHHHhcceeEEeC
Confidence 9999999999999999999999999999999987654 467899999999986 3569999999999999864
No 48
>cd07144 ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like. NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD.
Probab=100.00 E-value=1.5e-72 Score=636.50 Aligned_cols=397 Identities=16% Similarity=0.220 Sum_probs=338.1
Q ss_pred HHHHcCCcceeEEecCCcccccHhhHHHHHHHHHHHHHH-HhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHh
Q 005074 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRR-LQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 346 (715)
Q Consensus 268 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~-w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~ 346 (715)
.+|.+|+.++++...+ .+|+++++++|++||+. |+++|.++|.++|++++++|++|+++|++++.+|.++...
T Consensus 28 ~~P~tg~~i~~~~~~~------~~~v~~ai~~A~~A~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~Gk~~~ 101 (484)
T cd07144 28 VNPSTGEVIASVYAAG------EEDVDKAVKAARKAFESWWSKVTGEERGELLDKLADLVEKNRDLLAAIEALDSGKPYH 101 (484)
T ss_pred ECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHhhHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChH
Confidence 4678899999999888 89999999999999996 8899999999999999999999999999998877654321
Q ss_pred hchhHHHHHHhhcChhHHHHHHHHHHHHhccccc-ccccccccccCCCeEEEEeeeceeEEEEEcCC-Chh-hHHHHHHH
Q 005074 347 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 423 (715)
Q Consensus 347 ~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ 423 (715)
+.. ..++..+++.+++++++.+. .|...+. ..+...++.|+|+|||++|+|| ||. +++++++|
T Consensus 102 ----~~~-------~~ev~~~~~~l~~~~~~~~~~~g~~~~~---~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~ 167 (484)
T cd07144 102 ----SNA-------LGDLDEIIAVIRYYAGWADKIQGKTIPT---SPNKLAYTLHEPYGVCGQIIPWNYPLAMAAWKLAP 167 (484)
T ss_pred ----HHH-------HHHHHHHHHHHHHHHHHHHHhcCceecC---CCCceEEEEEecceEEEEECcCCCHHHHHHHHHHH
Confidence 111 23566666666666544322 2332221 1234467889999999999998 686 57899999
Q ss_pred HHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-cchhhHhhcCCCCccEEEeecCHHHHHHHHhhc
Q 005074 424 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST 501 (715)
Q Consensus 424 ALaaGN~vvlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a 501 (715)
||++||+||+|||+.+|+++..+.+++.+ + +|+|++|+|++ +.++++.|..||+||+|+||||+.+|++|++.+
T Consensus 168 ALaaGN~VV~Kps~~~p~~~~~l~~~~~~----aglP~gv~~~v~g~~~~~~~~L~~~~~vd~V~fTGS~~~g~~i~~~a 243 (484)
T cd07144 168 ALAAGNTVVIKPAENTPLSLLYFANLVKE----AGFPPGVVNIIPGYGAVAGSALAEHPDVDKIAFTGSTATGRLVMKAA 243 (484)
T ss_pred HHHcCCEEEEECCccchHHHHHHHHHHHH----hCcCCCcEEEEecCCchHHHHHhcCCCcCEEEEECcHHHHHHHHHHH
Confidence 99999999999999999999999999986 7 99999999995 566888899999999999999999999998876
Q ss_pred ---CCCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccCchhHHHHHHHHHh-cC------
Q 005074 502 ---KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQH-EG------ 570 (715)
Q Consensus 502 ---~~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~f~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~-~~------ 570 (715)
.||+++|||||||+||++|||++.|++.+++|+|.|+| .|+|++|||||+++| |+|+++|++++++ ++
T Consensus 244 ~~~~~~~~lElGGk~p~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~~G~p~~ 322 (484)
T cd07144 244 AQNLKAVTLECGGKSPALVFEDADLDQAVKWAAAGIMYNSGQNCTATSRIYVQESIY-DKFVEKFVEHVKQNYKVGSPFD 322 (484)
T ss_pred HhcCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCceEEEcHHHH-HHHHHHHHHHHHhhCCcCCCCC
Confidence 38999999999999999999999999999999999987 999999999999999 7999999999874 32
Q ss_pred ----------------------------CeE-ecCccc-----ccc-c-c-C-----CCCCCccccccCceEEEEEeCCH
Q 005074 571 ----------------------------VGL-FGGPRA-----SKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVDDV 608 (715)
Q Consensus 571 ----------------------------~~~-~g~~~~-----~~~-~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~ 608 (715)
.++ +|+... .++ + | | +++++++||+||||++|++|+|+
T Consensus 323 ~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~ 402 (484)
T cd07144 323 DDTVVGPQVSKTQYDRVLSYIEKGKKEGAKLVYGGEKAPEGLGKGYFIPPTIFTDVPQDMRIVKEEIFGPVVVISKFKTY 402 (484)
T ss_pred CCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCcccCCCCceECCEEEeCCCCCCchhhCCCCCceEEEeccCCH
Confidence 122 233321 233 3 5 2 36899999999999999999999
Q ss_pred HHHHHHHHhcCCCceeEEEecCHHHHHHHHHhcCcceEEEcCCCCCCCCCccCCcccccccccccccccccccccceEEE
Q 005074 609 RAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTR 688 (715)
Q Consensus 609 deAi~~aN~~~~GL~a~i~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~~~pfG~g~~sG~~~~~~~~~g~~gl~~ft~~K 688 (715)
||||+++|+++|||++||||+|.+++.+|++++++|+|+||+++...+.+||||.|+||+| +++|++|+++||+.|
T Consensus 403 ~eai~~~n~~~~gLsa~i~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G----~~~g~~~l~~~t~~k 478 (484)
T cd07144 403 EEAIKKANDTTYGLAAAVFTKDIRRAHRVARELEAGMVWINSSNDSDVGVPFGGFKMSGIG----RELGEYGLETYTQTK 478 (484)
T ss_pred HHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcCEEEECCCCCCCCCCCcCCcccCcCC----CCchHHHHHHhhceE
Confidence 9999999999999999999999999999999999999999998766677899999999985 356999999999999
Q ss_pred EEEEc
Q 005074 689 WILRG 693 (715)
Q Consensus 689 ~v~~~ 693 (715)
+|.+.
T Consensus 479 ~v~~~ 483 (484)
T cd07144 479 AVHIN 483 (484)
T ss_pred EEEEe
Confidence 98764
No 49
>cd07120 ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like. Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural.
Probab=100.00 E-value=6.6e-73 Score=632.72 Aligned_cols=394 Identities=20% Similarity=0.227 Sum_probs=336.6
Q ss_pred HHHcCCcceeEEecCCcccccHhhHHHHHHHHHHHHHH--HhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHh
Q 005074 269 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRR--LQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 346 (715)
Q Consensus 269 ~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~--w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~ 346 (715)
+|.||+.++++..++ .+|+++|++.|++||+. |+. ++++|.++|++++++|++|+++|++++.+|.+++.
T Consensus 3 nP~t~~~i~~~~~~~------~~~v~~av~~A~~a~~~~~w~~-~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~- 74 (455)
T cd07120 3 DPATGEVIGTYADGG------VAEAEAAIAAARRAFDETDWAH-DPRLRARVLLELADAFEANAERLARLLALENGKIL- 74 (455)
T ss_pred CCCCCCEEEEEeCCC------HHHHHHHHHHHHHhcCCCccCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCH-
Confidence 578999999999888 89999999999999985 998 89999999999999999999999999987765442
Q ss_pred hchhHHHHHHhhcChhHHHHHHHHHHHHhcccc-cccccccccccCCCeEEEEeeeceeEEEEEcCC-Chh-hHHHHHHH
Q 005074 347 AGYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 423 (715)
Q Consensus 347 ~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ 423 (715)
.++. .|+..+++.++++++..+ ..|...+. ..+...++.|+|+|||++|+|| ||. +.+++++|
T Consensus 75 ---~~a~--------~Ev~~~i~~l~~~~~~~~~~~g~~~~~---~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~ 140 (455)
T cd07120 75 ---GEAR--------FEISGAISELRYYAGLARTEAGRMIEP---EPGSFSLVLREPMGVAGIIVPWNSPVVLLVRSLAP 140 (455)
T ss_pred ---HHHH--------HHHHHHHHHHHHHHHHHHHhcCccccc---CCCceEEEEEecceeEEEECCCchHHHHHHHHHHH
Confidence 1221 256666677776654332 22332211 1234567899999999999998 584 67799999
Q ss_pred HHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-cchhhHhhcCCCCccEEEeecCHHHHHHHHhhc
Q 005074 424 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST 501 (715)
Q Consensus 424 ALaaGN~vvlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a 501 (715)
||++||+||+|||+.+|.++..++++++++ + +|+|++|+|++ +.++++.|..||++++|+||||+++|+.|++.+
T Consensus 141 AL~aGN~vvlKps~~~~~~~~~l~~~~~~a---ag~P~g~~~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a 217 (455)
T cd07120 141 ALAAGCTVVVKPAGQTAQINAAIIRILAEI---PSLPAGVVNLFTESGSEGAAHLVASPDVDVISFTGSTATGRAIMAAA 217 (455)
T ss_pred HHHcCCEEEeECCCCChHHHHHHHHHHHHh---cCCCccceEEEecCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHH
Confidence 999999999999999999999999999863 5 99999999995 566788888999999999999999999998877
Q ss_pred ---CCCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccCchhHHHHHHHHHhcCC------
Q 005074 502 ---KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------ 571 (715)
Q Consensus 502 ---~~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~f~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~------ 571 (715)
.||+++|||||||+||++|||+|.|++.+++++|.|+| .|++++|||||+++| |+|+++|+++++++.+
T Consensus 218 a~~~~~~~lElGG~~~~IV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-~~f~~~l~~~~~~l~~G~p~~~ 296 (455)
T cd07120 218 APTLKRLGLELGGKTPCIVFDDADLDAALPKLERALTIFAGQFCMAGSRVLVQRSIA-DEVRDRLAARLAAVKVGPGLDP 296 (455)
T ss_pred HhcCCeEEEECCCCCeeEECCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEEcHHHH-HHHHHHHHHHHHhcCcCCCCCC
Confidence 38999999999999999999999999999999999987 999999999999999 7999999999887631
Q ss_pred ----------------------------eE-ecCcc-c----cc-cc-c-C-----CCCCCccccccCceEEEEEeCCHH
Q 005074 572 ----------------------------GL-FGGPR-A----SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVR 609 (715)
Q Consensus 572 ----------------------------~~-~g~~~-~----~~-~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~d 609 (715)
++ .|+.+ . .+ ++ | | ++|++++||+||||++|++|+|+|
T Consensus 297 ~~~~gpli~~~~~~~~~~~i~~a~~~ga~~~~~g~~~~~~~~~g~~~~Ptvl~~~~~d~~i~~~E~FgPvl~v~~~~~~d 376 (455)
T cd07120 297 ASDMGPLIDRANVDRVDRMVERAIAAGAEVVLRGGPVTEGLAKGAFLRPTLLEVDDPDADIVQEEIFGPVLTLETFDDEA 376 (455)
T ss_pred CCCcCCccCHHHHHHHHHHHHHHHHCCCEEEeCCccCcccCCCCceECCEEEecCCCCChhhhCcCcCceEEEeecCCHH
Confidence 12 22221 1 12 23 5 2 358899999999999999999999
Q ss_pred HHHHHHHhcCCCceeEEEecCHHHHHHHHHhcCcceEEEcCCCCCCCCCccCCcccccccccccccccccccccceEEEE
Q 005074 610 AAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRW 689 (715)
Q Consensus 610 eAi~~aN~~~~GL~a~i~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~~~pfG~g~~sG~~~~~~~~~g~~gl~~ft~~K~ 689 (715)
|||+++|+++|||++||||+|.++++++++++++|+|+||++....+..||||.++||+| +++|++|+++||+.|+
T Consensus 377 eai~~~n~~~~gLs~~ift~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G----~~~g~~~l~~ft~~k~ 452 (455)
T cd07120 377 EAVALANDTDYGLAASVWTRDLARAMRVARAIRAGTVWINDWNKLFAEAEEGGYRQSGLG----RLHGVAALEDFIEYKH 452 (455)
T ss_pred HHHHHHhCCCCCceEEEEcCCHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCccccccC----ccchHHHHHHHhceeE
Confidence 999999999999999999999999999999999999999998877778899999999985 3469999999999999
Q ss_pred EEE
Q 005074 690 ILR 692 (715)
Q Consensus 690 v~~ 692 (715)
|++
T Consensus 453 v~~ 455 (455)
T cd07120 453 IYL 455 (455)
T ss_pred EeC
Confidence 863
No 50
>cd07115 ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like. 4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD.
Probab=100.00 E-value=1.2e-72 Score=632.86 Aligned_cols=396 Identities=18% Similarity=0.199 Sum_probs=338.5
Q ss_pred HHHcCCcceeEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhhc
Q 005074 269 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAG 348 (715)
Q Consensus 269 ~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~g 348 (715)
+|.+|+.++++...+ .+++++++++|++||+.|+.+|.++|.++|++++++|++|+++|++++.+|++++..
T Consensus 3 ~P~t~~~i~~~~~~~------~~~v~~av~~a~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~la~~~~~e~Gk~~~-- 74 (453)
T cd07115 3 NPATGELIARVAQAS------AEDVDAAVAAARAAFEAWSAMDPAERGRILWRLAELILANADELARLESLDTGKPIR-- 74 (453)
T ss_pred CCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH--
Confidence 578899999998888 899999999999999999999999999999999999999999999999877654421
Q ss_pred hhHHHHHHhhcChhHHHHHHHHHHHHhccccc-ccccccccccCCCeEEEEeeeceeEEEEEcCC-Chh-hHHHHHHHHH
Q 005074 349 YAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAI 425 (715)
Q Consensus 349 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~AL 425 (715)
++.. .|+..+++.+++++.+.+. .+...+. ..+...+++++|+|||++|+|| ||. +.+++++|||
T Consensus 75 --~~~~-------~ev~~~i~~l~~~~~~~~~~~g~~~~~---~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~AL 142 (453)
T cd07115 75 --AARR-------LDVPRAADTFRYYAGWADKIEGEVIPV---RGPFLNYTVREPVGVVGAIVPWNFPLMFAAWKVAPAL 142 (453)
T ss_pred --HHHH-------HHHHHHHHHHHHHHHHHHHhcCceecC---CCCceEEEEecceeEEEEEcCCCCHHHHHHHHHHHHH
Confidence 2211 2455566666666543322 2322221 1244567899999999999998 685 5678999999
Q ss_pred HhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-cchhhHhhcCCCCccEEEeecCHHHHHHHHhhc--
Q 005074 426 RSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST-- 501 (715)
Q Consensus 426 aaGN~vvlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a-- 501 (715)
++||+||+|||+.||+++..+++++.+ + ||+|++|+|++ +.++++.|..||++|+|+||||+.+|+.|++.+
T Consensus 143 aaGN~Vi~Kps~~~p~~~~~l~~~~~~----aGlP~~~~~~v~g~~~~~~~~l~~~~~id~v~fTGs~~~g~~v~~~aa~ 218 (453)
T cd07115 143 AAGNTVVLKPAELTPLSALRIAELMAE----AGFPAGVLNVVTGFGEVAGAALVEHPDVDKITFTGSTAVGRKIMQGAAG 218 (453)
T ss_pred hcCCEEEEECCCCCcHHHHHHHHHHHh----cCcCchheEEEecCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhh
Confidence 999999999999999999999999986 8 99999999995 556788888999999999999999999998876
Q ss_pred -CCCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccCchhHHHHHHHHHhcC---------
Q 005074 502 -KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEG--------- 570 (715)
Q Consensus 502 -~~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~f~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~--------- 570 (715)
.||+++|||||||+||++|||+|.|++.+++++|.|+| .|+|++|||||+++| |+|+++|+++++++.
T Consensus 219 ~~~~~~lElgG~~p~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~-~~f~~~l~~~~~~~~~g~p~~~~~ 297 (453)
T cd07115 219 NLKRVSLELGGKSANIVFADADLDAAVRAAATGIFYNQGQMCTAGSRLLVHESIY-DEFLERFTSLARSLRPGDPLDPKT 297 (453)
T ss_pred cCCeEEEecCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCCCCeEEEEcHHHH-HHHHHHHHHHHhcCCcCCCCCCCC
Confidence 38999999999999999999999999999999999876 999999999999999 799999999887652
Q ss_pred -------------------------CeEe-cCccc--cc-cc-c-C-----CCCCCccccccCceEEEEEeCCHHHHHHH
Q 005074 571 -------------------------VGLF-GGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDH 614 (715)
Q Consensus 571 -------------------------~~~~-g~~~~--~~-~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~ 614 (715)
.++. |+... .+ ++ | | +++++++||+||||++|++|+|+||||++
T Consensus 298 ~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~ 377 (453)
T cd07115 298 QMGPLVSQAQFDRVLDYVDVGREEGARLLTGGKRPGARGFFVEPTIFAAVPPEMRIAQEEIFGPVVSVMRFRDEEEALRI 377 (453)
T ss_pred CCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCceECCEEEecCCCCChHhhCCCcCceEEEEeeCCHHHHHHH
Confidence 2222 33322 23 33 5 2 35789999999999999999999999999
Q ss_pred HHhcCCCceeEEEecCHHHHHHHHHhcCcceEEEcCCCCCCCCCccCCcccccccccccccccccccccceEEEEEEEc
Q 005074 615 IHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRG 693 (715)
Q Consensus 615 aN~~~~GL~a~i~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~~~pfG~g~~sG~~~~~~~~~g~~gl~~ft~~K~v~~~ 693 (715)
+|+++|||++||||+|.+++++|++++++|+|+||++....+.+||||.++||+| +++|++|+++|++.|+++++
T Consensus 378 ~n~~~~gL~~~ifs~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~G----~~~g~~~~~~f~~~k~~~~~ 452 (453)
T cd07115 378 ANGTEYGLAAGVWTRDLGRAHRVAAALKAGTVWINTYNRFDPGSPFGGYKQSGFG----REMGREALDEYTEVKSVWVN 452 (453)
T ss_pred HhCCCCCCeEEEECCCHHHHHHHHHhcCccEEEECCCCCCCCCCCCCCcccccCC----cCchHHHHHHhhceEEEEEe
Confidence 9999999999999999999999999999999999997777778999999999985 24699999999999998763
No 51
>cd07094 ALDH_F21_LactADH-like ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins. ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences.
Probab=100.00 E-value=1.6e-72 Score=632.13 Aligned_cols=398 Identities=21% Similarity=0.270 Sum_probs=334.9
Q ss_pred HHHHcCCcceeEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhh
Q 005074 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 347 (715)
Q Consensus 268 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~ 347 (715)
.+|+||+.++++..++ .+|+++++++|++||+.|+++|.++|.++|++++++|++|+++|++++.+|.+++..
T Consensus 4 ~~P~t~~~~~~~~~~~------~~~v~~av~~a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~- 76 (453)
T cd07094 4 HNPYDGEVIGKVPADD------RADAEEALATARAGAENRRALPPHERMAILERAADLLKKRAEEFAKIIACEGGKPIK- 76 (453)
T ss_pred cCCCCCCEEEEEcCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH-
Confidence 5688999999998888 899999999999999999999999999999999999999999999998877655432
Q ss_pred chhHHHHHHhhcChhHHHHHHHHHHHHhcccc-ccccccccc--ccCCCeEEEEeeeceeEEEEEcCC-Chh-hHHHHHH
Q 005074 348 GYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRT--ELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIAS 422 (715)
Q Consensus 348 g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~g~~~~~~--~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~ 422 (715)
++. .|+..+++.++++++..+ ..++..+.. ....+...+++++|+|||++|+|| +|. +.+++++
T Consensus 77 ---~a~--------~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~ 145 (453)
T cd07094 77 ---DAR--------VEVDRAIDTLRLAAEEAERIRGEEIPLDATQGSDNRLAWTIREPVGVVLAITPFNFPLNLVAHKLA 145 (453)
T ss_pred ---HHH--------HHHHHHHHHHHHHHHHHHHhcCccccccccccCCCceEEEEEeccceEEEECCCccHHHHHHHHHH
Confidence 221 134444444444433211 112211110 001244567889999999999998 584 6789999
Q ss_pred HHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-cchhhHhhcCCCCccEEEeecCHHHHHHHHhh
Q 005074 423 LAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKES 500 (715)
Q Consensus 423 ~ALaaGN~vvlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~ 500 (715)
+||++||+||+|||+.+|+++..+++++.+ + +|+|+||+|++ +.++++.|..||++|+|+||||+++|+.|++.
T Consensus 146 ~AL~aGN~VI~Kps~~~p~~~~~l~~~l~~----ag~P~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~v~~~ 221 (453)
T cd07094 146 PAIATGCPVVLKPASKTPLSALELAKILVE----AGVPEGVLQVVTGEREVLGDAFAADERVAMLSFTGSAAVGEALRAN 221 (453)
T ss_pred HHHHcCCEEEEECCCcchHHHHHHHHHHHH----cCCCcCcEEEEeCCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHH
Confidence 999999999999999999999999999987 7 99999999995 56678888899999999999999999999988
Q ss_pred c-CCCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccCchhHHHHHHHHHhcCC-------
Q 005074 501 T-KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------- 571 (715)
Q Consensus 501 a-~~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~f~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~------- 571 (715)
+ .+|+++|||||||+||++|||||.|++.+++++|.|+| .|+|++|||||+++| |+|+++|+++++++.+
T Consensus 222 a~~~~~~lelGGk~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~i~V~~~i~-d~f~~~L~~~~~~~~~g~p~~~~ 300 (453)
T cd07094 222 AGGKRIALELGGNAPVIVDRDADLDAAIEALAKGGFYHAGQVCISVQRIYVHEELY-DEFIEAFVAAVKKLKVGDPLDED 300 (453)
T ss_pred cCCCceEEecCCCCceEECCCCCHHHHHHHHHHHHHHhcCCCCcCCeEEEEeHHHH-HHHHHHHHHHHHhccCCCCCCCC
Confidence 7 48999999999999999999999999999999999987 999999999999999 7999999999987532
Q ss_pred ---------------------------eE-ecCccccccc-c-C-----CCCCCccccccCceEEEEEeCCHHHHHHHHH
Q 005074 572 ---------------------------GL-FGGPRASKLL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIH 616 (715)
Q Consensus 572 ---------------------------~~-~g~~~~~~~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN 616 (715)
++ .|+.....++ | | +++++++||+||||++|++|+|+||||+++|
T Consensus 301 ~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~g~~~~Ptvl~~~~~~~~i~~~E~FgPvl~v~~~~~~~eai~~~n 380 (453)
T cd07094 301 TDVGPLISEEAAERVERWVEEAVEAGARLLCGGERDGALFKPTVLEDVPRDTKLSTEETFGPVVPIIRYDDFEEAIRIAN 380 (453)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCccCCCeEEeCEEEeCCCCCChhhhCCCcCceEEEEEeCCHHHHHHHHh
Confidence 11 1222111223 5 2 3689999999999999999999999999999
Q ss_pred hcCCCceeEEEecCHHHHHHHHHhcCcceEEEcCCCCC-CCCCccCCcccccccccccccccccccccceEEEEEEE
Q 005074 617 QHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRF-CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILR 692 (715)
Q Consensus 617 ~~~~GL~a~i~t~d~~~~~~~~~~l~~G~V~iN~~~~~-~~~~pfG~g~~sG~~~~~~~~~g~~gl~~ft~~K~v~~ 692 (715)
+++|||++||||+|.++++++++++++|+|+||+++.. .+.+||||.|+||+| +++|++|+++|++.|+|++
T Consensus 381 ~~~~gL~~~i~t~d~~~a~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~~~SG~G----~~~g~~~~~~~~~~k~i~~ 453 (453)
T cd07094 381 STDYGLQAGIFTRDLNVAFKAAEKLEVGGVMVNDSSAFRTDWMPFGGVKESGVG----REGVPYAMEEMTEEKTVVI 453 (453)
T ss_pred CCCCCCeeEEECCCHHHHHHHHHhcCcCeEEEcCCCCCCCCCCCCCCccccccC----cCChHHHHHHHhceeEEeC
Confidence 99999999999999999999999999999999998654 467899999999985 3569999999999999863
No 52
>PLN02203 aldehyde dehydrogenase
Probab=100.00 E-value=2.3e-72 Score=628.60 Aligned_cols=386 Identities=20% Similarity=0.223 Sum_probs=325.9
Q ss_pred HhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhhchhHHHHHHhhcChhHHHHHHH
Q 005074 290 QVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAK 369 (715)
Q Consensus 290 ~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~i~~~~~ 369 (715)
.+||++++++|++||+.|+.+|..+|.++|++++++|++|+|+|++++++|++++. .++...++......++++++
T Consensus 5 ~~~v~~av~~a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~----~ea~~~Ev~~~~~~~~~~~~ 80 (484)
T PLN02203 5 GETLEGSVAELRETYESGRTRSLEWRKSQLKGLLRLLKDNEEAIFKALHQDLGKHR----VEAYRDEVGVLTKSANLALS 80 (484)
T ss_pred HHHHHHHHHHHHHHHHhcCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH----HHHHHHHHHHHHHHHHHHHH
Confidence 68999999999999999999999999999999999999999999999998886653 23333344455556677777
Q ss_pred HHHHHhcccccccccccccccCCCeEEEEeeeceeEEEEEcCC-Chh-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHH
Q 005074 370 SIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILH 447 (715)
Q Consensus 370 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGN~vvlKps~~tp~t~~~l~ 447 (715)
.++.+.+... +. .+.. ..+...++.|+|+|||++|+|| ||. +.++++++||++||+||+|||+.||+|+.+++
T Consensus 81 ~~~~~~~~~~--~~-~~~~--~~~~~~~~~reP~GVv~~I~pwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~ 155 (484)
T PLN02203 81 NLKKWMAPKK--AK-LPLV--AFPATAEVVPEPLGVVLIFSSWNFPIGLSLEPLIGAIAAGNAVVLKPSELAPATSAFLA 155 (484)
T ss_pred HHHHHhcccc--cc-CCcc--cCCceeEEEEecccEEEEEcCCcchHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHH
Confidence 6666653211 11 1110 1133567889999999999998 585 57789999999999999999999999999999
Q ss_pred HHHHHhcccccCcCceEEecCcchhhHhhcCCCCccEEEeecCHHHHHHHHhhc---CCCEEEecCCcceEEEcC---CC
Q 005074 448 KVITSAIPDTVGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST---KIPVLGHADGICHVYVDK---SA 521 (715)
Q Consensus 448 ~~~~~al~~alP~gvv~vv~~~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a---~~~~~lElGGk~p~iV~~---dA 521 (715)
+++++ +||+|++|+|+|+.++++.|..|+ +|+|+||||+++|+.|++.| .+|+++|||||||+||++ ||
T Consensus 156 ~~~~~----~lP~gvv~vv~g~~~~~~~l~~~~-vd~v~fTGS~~~G~~v~~~aa~~l~~v~lElGGknp~iV~~d~~da 230 (484)
T PLN02203 156 ANIPK----YLDSKAVKVIEGGPAVGEQLLQHK-WDKIFFTGSPRVGRIIMTAAAKHLTPVALELGGKCPCIVDSLSSSR 230 (484)
T ss_pred HHHHH----hCCcCEEEEEeCCHHHHHHHHhCC-CCEEEEECCHHHHHHHHHHHHhcCCCEEEEecCCCeEEEccCCCCC
Confidence 99986 599999999997667888888885 99999999999999999887 489999999999999997 69
Q ss_pred CHHHHHHHHHhhccC-CCc-cccccceEEEcCcccCchhHHHHHHHHHhcCC----------------------------
Q 005074 522 NLDVAKNIVIDAKID-YPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV---------------------------- 571 (715)
Q Consensus 522 Dl~~A~~~iv~~~f~-n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~---------------------------- 571 (715)
|+|.|++.+++|+|. |+| +|+|++|+|||++|| |+|+++|+++++++..
T Consensus 231 Dl~~aa~~i~~~~f~~~aGQ~C~a~~rv~V~~~i~-d~f~~~L~~~~~~~~~G~p~~~~~~Gpli~~~~~~~v~~~i~~a 309 (484)
T PLN02203 231 DTKVAVNRIVGGKWGSCAGQACIAIDYVLVEERFA-PILIELLKSTIKKFFGENPRESKSMARILNKKHFQRLSNLLKDP 309 (484)
T ss_pred CHHHHHHHHHHHhcccCCCCccccCCeEEEcHHHH-HHHHHHHHHHHHHhcCCCCCcCCCcCCCCCHHHHHHHHHHHHHH
Confidence 999999999999995 666 999999999999999 7999999999877521
Q ss_pred ----e-EecCccc-ccc-c-c-C-----CCCCCccccccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEecCHHHHHHH
Q 005074 572 ----G-LFGGPRA-SKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETF 637 (715)
Q Consensus 572 ----~-~~g~~~~-~~~-~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~i~t~d~~~~~~~ 637 (715)
. +.|+... .++ + | | ++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++
T Consensus 310 ~~~~~~~~gg~~~~~g~~i~PTvl~~v~~d~~i~~eE~FGPVl~v~~~~~~~eai~~aN~~~~gL~a~vft~d~~~a~~~ 389 (484)
T PLN02203 310 RVAASIVHGGSIDEKKLFIEPTILLNPPLDSDIMTEEIFGPLLPIITVKKIEDSIAFINSKPKPLAIYAFTNNEKLKRRI 389 (484)
T ss_pred HhCCeEEeCCCcCCCCCEEeeEEEecCCCCCHHHhcCccCCeEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHH
Confidence 1 1233211 233 3 5 2 3689999999999999999999999999999999999999999999999999
Q ss_pred HHhcCcceEEEcCCCCC--CCCCccCCcccccccccccccccccccccceEEEEEEEcC
Q 005074 638 LCQVDSAAVFHNASTRF--CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGN 694 (715)
Q Consensus 638 ~~~l~~G~V~iN~~~~~--~~~~pfG~g~~sG~~~~~~~~~g~~gl~~ft~~K~v~~~~ 694 (715)
++++++|.|+||++... .+.+||||.|.||+| +++|++|+++||+.|+|+++.
T Consensus 390 ~~~l~~G~V~IN~~~~~~~~~~~PfGG~k~SG~G----r~~g~~~l~~ft~~k~v~~~~ 444 (484)
T PLN02203 390 LSETSSGSVTFNDAIIQYACDSLPFGGVGESGFG----RYHGKYSFDTFSHEKAVLRRS 444 (484)
T ss_pred HHhCCcceEEECCcccccCCCCCCCCCcCcccCC----ccccHHHHHHhcceeEEEEcC
Confidence 99999999999987543 367899999999986 356999999999999998874
No 53
>cd07109 ALDH_AAS00426 Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like. Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD.
Probab=100.00 E-value=1.5e-72 Score=632.38 Aligned_cols=393 Identities=19% Similarity=0.207 Sum_probs=335.9
Q ss_pred HHHcCCcceeEEecCCcccccHhhHHHHHHHHHHHHHHHh-cCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhh
Q 005074 269 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQ-ALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 347 (715)
Q Consensus 269 ~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~-~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~ 347 (715)
+|++|+.++++..++ .+|+++++++|++||+.|. ++|.++|.++|++++++|++|+++|++++++|.+++..
T Consensus 3 ~P~tg~~i~~~~~~~------~~dv~~av~~a~~A~~~~~~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~- 75 (454)
T cd07109 3 DPSTGEVFARIARGG------AADVDRAVQAARRAFESGWLRLSPAERGRLLLRIARLIREHADELARLESLDTGKPLT- 75 (454)
T ss_pred CCCCCCEEEEEcCCC------HHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHH-
Confidence 578999999999888 8999999999999999876 99999999999999999999999999999877654321
Q ss_pred chhHHHHHHhhcChhHHHHHHHHHHHHhccccc-ccccccccccCCCeEEEEeeeceeEEEEEcCC-Chh-hHHHHHHHH
Q 005074 348 GYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 424 (715)
Q Consensus 348 g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~A 424 (715)
++ ..|+..+++.++++++..+. .+...+. ..+...+++++|+|||++|+|| ||. +.++++++|
T Consensus 76 ---~a--------~~ev~~~~~~l~~~~~~~~~~~g~~~~~---~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~A 141 (454)
T cd07109 76 ---QA--------RADVEAAARYFEYYGGAADKLHGETIPL---GPGYFVYTVREPHGVTGHIIPWNYPLQITGRSVAPA 141 (454)
T ss_pred ---HH--------HHHHHHHHHHHHHHHHHHHHhcCccccc---CCCceEEEEEeeeeEEEEECCCchHHHHHHHHHHHH
Confidence 22 12566666666666543322 2322221 1244567899999999999998 684 678999999
Q ss_pred HHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-cchhhHhhcCCCCccEEEeecCHHHHHHHHhhc-
Q 005074 425 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST- 501 (715)
Q Consensus 425 LaaGN~vvlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a- 501 (715)
|++||+||+|||+.||+|+..+++++.+ + ||+|++|+|++ +.+.++.|..||++|+|+||||+.+|+.|++.+
T Consensus 142 LaaGN~VvlKps~~~p~~~~~l~~~~~~----aGlP~gv~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa 217 (454)
T cd07109 142 LAAGNAVVVKPAEDAPLTALRLAELAEE----AGLPAGALNVVTGLGAEAGAALVAHPGVDHISFTGSVETGIAVMRAAA 217 (454)
T ss_pred HHcCCEEEEECCCCChHHHHHHHHHHHH----cCcCccceEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHh
Confidence 9999999999999999999999999986 7 99999999996 556777788899999999999999999999877
Q ss_pred --CCCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccCchhHHHHHHHHHhcCC-------
Q 005074 502 --KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------- 571 (715)
Q Consensus 502 --~~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~f~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~------- 571 (715)
.||+++|||||||+||++|||||.|++.+++|+|.|+| .|+|++|||||+++| |+|+++|+++++++.+
T Consensus 218 ~~~~p~~lElgG~~~~iV~~daDl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-~~f~~~l~~~~~~~~~G~p~~~~ 296 (454)
T cd07109 218 ENVVPVTLELGGKSPQIVFADADLEAALPVVVNAIIQNAGQTCSAGSRLLVHRSIY-DEVLERLVERFRALRVGPGLEDP 296 (454)
T ss_pred hcCCcEEEECCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCccCcEEEEcHHHH-HHHHHHHHHHHHhCCCCCCcccC
Confidence 48999999999999999999999999999999999987 999999999999999 7999999999887532
Q ss_pred --------------------------eEe-cCccc-----cc-cc-c-C-----CCCCCccccccCceEEEEEeCCHHHH
Q 005074 572 --------------------------GLF-GGPRA-----SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAA 611 (715)
Q Consensus 572 --------------------------~~~-g~~~~-----~~-~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deA 611 (715)
+++ |+... .+ ++ | | +++++++||+||||++|++|+|+|||
T Consensus 297 ~~gpli~~~~~~~~~~~i~~a~~~ga~~l~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~deA 376 (454)
T cd07109 297 DLGPLISAKQLDRVEGFVARARARGARIVAGGRIAEGAPAGGYFVAPTLLDDVPPDSRLAQEEIFGPVLAVMPFDDEAEA 376 (454)
T ss_pred cCCCccCHHHHHHHHHHHHHHHhCCCEEEeCCCcCcccCCCCcEECcEEEecCCCCChhhhCCCCCceEEEEecCCHHHH
Confidence 222 33221 13 23 5 2 36899999999999999999999999
Q ss_pred HHHHHhcCCCceeEEEecCHHHHHHHHHhcCcceEEEcCCC-CCCCCCccCCcccccccccccccccccccccceEEEEE
Q 005074 612 IDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNAST-RFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWI 690 (715)
Q Consensus 612 i~~aN~~~~GL~a~i~t~d~~~~~~~~~~l~~G~V~iN~~~-~~~~~~pfG~g~~sG~~~~~~~~~g~~gl~~ft~~K~v 690 (715)
|+++|+++|||++||||+|.++++++++++++|+|+||+.. .....+||||.|.||+| +++|++|+++||+.|+|
T Consensus 377 i~~~n~~~~gL~~~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~k~SG~G----~~~g~~~~~~f~~~k~i 452 (454)
T cd07109 377 IALANGTDYGLVAGVWTRDGDRALRVARRLRAGQVFVNNYGAGGGIELPFGGVKKSGHG----REKGLEALYNYTQTKTV 452 (454)
T ss_pred HHHhhCCCCCceEEEECCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCCcCCcccCcCC----ccchHHHHHHHhceeEE
Confidence 99999999999999999999999999999999999999876 44557899999999985 35699999999999998
Q ss_pred E
Q 005074 691 L 691 (715)
Q Consensus 691 ~ 691 (715)
+
T Consensus 453 ~ 453 (454)
T cd07109 453 A 453 (454)
T ss_pred e
Confidence 5
No 54
>cd07089 ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins. The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD.
Probab=100.00 E-value=1.4e-72 Score=632.22 Aligned_cols=399 Identities=19% Similarity=0.199 Sum_probs=335.0
Q ss_pred HHHcCCcceeEEecCCcccccHhhHHHHHHHHHHHHHHHh-cCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhh
Q 005074 269 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQ-ALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 347 (715)
Q Consensus 269 ~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~-~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~ 347 (715)
+|.+|+.++++...+ .+|+++++++|++||+.|+ ++|.++|.++|++++++|++|+++|++++..|.+++..
T Consensus 3 ~P~tg~~i~~~~~~~------~~~v~~av~~A~~a~~~w~w~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~- 75 (459)
T cd07089 3 NPATEEVIGTAPDAG------AADVDAAIAAARRAFDTGDWSTDAEERARCLRQLHEALEARKEELRALLVAEVGAPVM- 75 (459)
T ss_pred CCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHhhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHH-
Confidence 578899999998888 8999999999999999999 99999999999999999999999999999877765431
Q ss_pred chhHHHHHHhhcChhHHHHHHHHHHHHhccccccccc-ccccc-cCCCeEEEEeeeceeEEEEEcCC-Chh-hHHHHHHH
Q 005074 348 GYAKSLVSRLALKPGKISSLAKSIRILADMEEPIGQI-LKRTE-LADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 423 (715)
Q Consensus 348 g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~-~~~~~-~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ 423 (715)
++...++....+.++++++.++.+. +.. .+... ...+...+++++|+|||++|+|| ||. +.+++++|
T Consensus 76 ---~~~~~ev~~~i~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P~N~P~~~~~~~~~~ 146 (459)
T cd07089 76 ---TARAMQVDGPIGHLRYFADLADSFP------WEFDLPVPALRGGPGRRVVRREPVGVVAAITPWNFPFFLNLAKLAP 146 (459)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHHHhc------CceecCcccccCCCceeEEEEeeccEEEEEcCCchHHHHHHHHHHH
Confidence 1211222223334444444443332 111 11100 01234567899999999999998 685 56899999
Q ss_pred HHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-cchhhHhhcCCCCccEEEeecCHHHHHHHHhhc
Q 005074 424 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST 501 (715)
Q Consensus 424 ALaaGN~vvlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a 501 (715)
||++||+||+|||+.+|.++..+++++.+ + ||+|++|+|++ +.+++..|..||++++|+||||+.+|+.|++.+
T Consensus 147 AL~aGN~vvlKps~~~p~~~~~l~~~~~~----aglP~g~~~~v~g~~~~~~~~l~~~~~~~~v~ftGs~~~g~~v~~~a 222 (459)
T cd07089 147 ALAAGNTVVLKPAPDTPLSALLLGEIIAE----TDLPAGVVNVVTGSDNAVGEALTTDPRVDMVSFTGSTAVGRRIMAQA 222 (459)
T ss_pred HHHcCCEEEEECCCCChHHHHHHHHHHHH----cCCCccceEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHH
Confidence 99999999999999999999999999987 7 99999999996 555788888999999999999999999999877
Q ss_pred ---CCCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccCchhHHHHHHHHHhcCC------
Q 005074 502 ---KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------ 571 (715)
Q Consensus 502 ---~~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~f~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~------ 571 (715)
.||+++|||||||+||++|||+|.|++.+++++|.|+| .|+|++|+|||+++| |+|+++|+++++++.+
T Consensus 223 a~~~~~~~lelgG~n~~iV~~dadl~~aa~~i~~~~~~~sGQ~C~a~~~v~V~~~v~-~~f~~~l~~~~~~~~~g~p~~~ 301 (459)
T cd07089 223 AATLKRVLLELGGKSANIVLDDADLAAAAPAAVGVCMHNAGQGCALTTRLLVPRSRY-DEVVEALAAAFEALPVGDPADP 301 (459)
T ss_pred HhcCCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHHHhcCCcccCCeEEEEcHHHH-HHHHHHHHHHHHhCCCCCCCCC
Confidence 38999999999999999999999999999999999976 999999999999999 7999999999887632
Q ss_pred ----------------------------eE-ecCccc----cc-cc-c-C-----CCCCCccccccCceEEEEEeCCHHH
Q 005074 572 ----------------------------GL-FGGPRA----SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRA 610 (715)
Q Consensus 572 ----------------------------~~-~g~~~~----~~-~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~de 610 (715)
++ .|+... .+ ++ | | +++++++||+||||++|++|+|+||
T Consensus 302 ~~~~gp~i~~~~~~~v~~~i~~a~~~Ga~~l~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~de 381 (459)
T cd07089 302 GTVMGPLISAAQRDRVEGYIARGRDEGARLVTGGGRPAGLDKGFYVEPTLFADVDNDMRIAQEEIFGPVLVVIPYDDDDE 381 (459)
T ss_pred CCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCeEECCEEEEcCCCCCHHHhCCCcCceEEEeccCCHHH
Confidence 11 233221 13 23 5 2 3578999999999999999999999
Q ss_pred HHHHHHhcCCCceeEEEecCHHHHHHHHHhcCcceEEEcCCCCCCCCCccCCcccccccccccccccccccccceEEEEE
Q 005074 611 AIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWI 690 (715)
Q Consensus 611 Ai~~aN~~~~GL~a~i~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~~~pfG~g~~sG~~~~~~~~~g~~gl~~ft~~K~v 690 (715)
||+++|+++|||++||||+|.+++.++++++++|+|+||++....+..||||.|.||+| +++|++|+++||+.|+|
T Consensus 382 ai~~~n~~~~gL~~~v~t~d~~~~~~~~~~~~~G~v~iN~~~~~~~~~PfgG~k~SG~G----~~~g~~~l~~ft~~k~v 457 (459)
T cd07089 382 AVRIANDSDYGLSGGVWSADVDRAYRVARRIRTGSVGINGGGGYGPDAPFGGYKQSGLG----RENGIEGLEEFLETKSI 457 (459)
T ss_pred HHHHHhCCCCCCeEEEEcCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCcCCcccccCC----CCchHHHHHHhhceeEE
Confidence 99999999999999999999999999999999999999998866677899999999986 24699999999999998
Q ss_pred EE
Q 005074 691 LR 692 (715)
Q Consensus 691 ~~ 692 (715)
.+
T Consensus 458 ~~ 459 (459)
T cd07089 458 AY 459 (459)
T ss_pred eC
Confidence 64
No 55
>cd07150 ALDH_VaniDH_like Pseudomonas putida vanillin dehydrogenase-like. Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde.
Probab=100.00 E-value=1.5e-72 Score=632.44 Aligned_cols=396 Identities=19% Similarity=0.220 Sum_probs=335.0
Q ss_pred HHHHcCCcceeEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhh
Q 005074 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 347 (715)
Q Consensus 268 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~ 347 (715)
.+|.||+.++++...+ .+|+++++++|++||+.|+.+|.++|.++|++++++|++++++|++++..|++++..
T Consensus 4 ~~P~tg~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~- 76 (451)
T cd07150 4 LNPADGSVYARVAVGS------RQDAERAIAAAYDAFPAWAATTPSERERILLKAAEIMERRADDLIDLLIDEGGSTYG- 76 (451)
T ss_pred cCCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHH-
Confidence 4678999999998888 899999999999999999999999999999999999999999999998877655421
Q ss_pred chhHHHHHHhhcChhHHHHHHHHHHHHhcccc-cccccccccccCCCeEEEEeeeceeEEEEEcCC-Chh-hHHHHHHHH
Q 005074 348 GYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 424 (715)
Q Consensus 348 g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~A 424 (715)
++. .|+...++.+++++...+ ..+...+.. ..+...+++++|+|||++|+|| +|. +.++++++|
T Consensus 77 ---~a~--------~ev~~~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~A 143 (451)
T cd07150 77 ---KAW--------FETTFTPELLRAAAGECRRVRGETLPSD--SPGTVSMSVRRPLGVVAGITPFNYPLILATKKVAFA 143 (451)
T ss_pred ---HHH--------HHHHHHHHHHHHHHHHHHHhcCccccCC--CCCceeEEEEecccEEEEECCCccHHHHHHHHHHHH
Confidence 221 244555555555543322 122222211 1244567889999999999998 686 567999999
Q ss_pred HHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-cchhhHhhcCCCCccEEEeecCHHHHHHHHhhc-
Q 005074 425 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST- 501 (715)
Q Consensus 425 LaaGN~vvlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a- 501 (715)
|++||+||+|||+.+|.|+..+++++.+ + ||+|++|+|++ +.++++.|..||+||+|+||||+.+|+.|++.+
T Consensus 144 LaaGN~VilKps~~~p~t~~~l~~~~~~----ag~P~g~v~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa 219 (451)
T cd07150 144 LAAGNTVVLKPSEETPVIGLKIAEIMEE----AGLPKGVFNVVTGGGAEVGDELVDDPRVRMVTFTGSTAVGREIAEKAG 219 (451)
T ss_pred HhcCCeEEEECCccCcHHHHHHHHHHHH----hCCCcCcEEEeeCCCcHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHh
Confidence 9999999999999999999999999986 7 99999999995 567888888999999999999999999998776
Q ss_pred --CCCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccCchhHHHHHHHHHhcCCe------
Q 005074 502 --KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGVG------ 572 (715)
Q Consensus 502 --~~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~f~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~~------ 572 (715)
.+|+++|||||||+||++|||+|.|++.+++++|.|+| .|++++|+|||+++| |+|+++|+++++++.+.
T Consensus 220 ~~~~~~~lelGG~~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-~~f~~~l~~~~~~~~~g~p~~~~ 298 (451)
T cd07150 220 RHLKKITLELGGKNPLIVLADADLDYAVRAAAFGAFMHQGQICMSASRIIVEEPVY-DEFVKKFVARASKLKVGDPRDPD 298 (451)
T ss_pred hcCCceEeecCCCCeeEECCCCChHHHHHHHHHHHHhhcCCCCCCCeeEEEcHHHH-HHHHHHHHHHHHhcCCCCCCCCC
Confidence 38999999999999999999999999999999999887 999999999999999 79999999999876321
Q ss_pred ----------------------------E-ecCccccccc-c-C-----CCCCCccccccCceEEEEEeCCHHHHHHHHH
Q 005074 573 ----------------------------L-FGGPRASKLL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIH 616 (715)
Q Consensus 573 ----------------------------~-~g~~~~~~~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN 616 (715)
+ .|+.....++ | | +++.+++||+||||++|++|+|+||||+++|
T Consensus 299 ~~~gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n 378 (451)
T cd07150 299 TVIGPLISPRQVERIKRQVEDAVAKGAKLLTGGKYDGNFYQPTVLTDVTPDMRIFREETFGPVTSVIPAKDAEEALELAN 378 (451)
T ss_pred CCCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccCCcEEcCEEEeCCCCCCHHHhCCCcCceEEEEEeCCHHHHHHHHh
Confidence 1 1211111122 5 2 3578999999999999999999999999999
Q ss_pred hcCCCceeEEEecCHHHHHHHHHhcCcceEEEcCCCCCC-CCCccCCcccccccccccccccccccccceEEEEEEE
Q 005074 617 QHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFC-DGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILR 692 (715)
Q Consensus 617 ~~~~GL~a~i~t~d~~~~~~~~~~l~~G~V~iN~~~~~~-~~~pfG~g~~sG~~~~~~~~~g~~gl~~ft~~K~v~~ 692 (715)
+++|||++||||+|.++++++++++++|.|+||+++... +.+||||.++||+| +++|++|+++||+.|+|++
T Consensus 379 ~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~pfgG~~~SG~G----~~~g~~~l~~~~~~k~v~~ 451 (451)
T cd07150 379 DTEYGLSAAILTNDLQRAFKLAERLESGMVHINDPTILDEAHVPFGGVKASGFG----REGGEWSMEEFTELKWITV 451 (451)
T ss_pred CCCCCCeEEEEeCCHHHHHHHHHhcCcCEEEECCCCCCCCCCCCcCCccccccC----cCCcHHHHHHhheeeEEeC
Confidence 999999999999999999999999999999999987554 56899999999985 3569999999999999863
No 56
>cd07124 ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA. Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis.
Probab=100.00 E-value=3.6e-72 Score=636.07 Aligned_cols=428 Identities=18% Similarity=0.206 Sum_probs=350.6
Q ss_pred CChHHHHHHHHHHHHcCCc---EEEEeCC-----CcchHHHHHc-CCcceeEEecCCcccccHhhHHHHHHHHHHHHHHH
Q 005074 237 GGMTAKVNAAYCAACAGIP---VVITSGF-----AMDSIIKVLE-GKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRL 307 (715)
Q Consensus 237 ggM~~Kl~aa~~a~~~gv~---v~I~~g~-----~~~~l~~~~t-g~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w 307 (715)
+-|+.+++.++..++...+ -.+++|. ..-...+|.+ |+.++++..++ .+|+++++++|++||+.|
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~v~~P~t~~~~i~~~~~a~------~~~v~~av~~A~~A~~~W 85 (512)
T cd07124 12 EENRAAFRAALARVREELGREYPLVIGGKEVRTEEKIESRNPADPSEVLGTVQKAT------KEEAEAAVQAARAAFPTW 85 (512)
T ss_pred HHHHHHHHHHHHHHHhhcccccceeECCEEecCCCeEEeECCCCCCceEEEEeCCC------HHHHHHHHHHHHHHHHHH
Confidence 3466677777766665532 1233442 1223578897 99999999888 899999999999999999
Q ss_pred hcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhhchhHHHHHHhhcChhHHHHHHHHHHHHhccccc-cccccc
Q 005074 308 QALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILK 386 (715)
Q Consensus 308 ~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~g~~~~ 386 (715)
+++|.++|.++|++++++|++|+++|++++.+|++++.. ++. .|+..+++.++++++..+. .+...+
T Consensus 86 ~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~----ea~--------~ev~~~i~~~~~~~~~~~~~~~~~~~ 153 (512)
T cd07124 86 RRTPPEERARLLLRAAALLRRRRFELAAWMVLEVGKNWA----EAD--------ADVAEAIDFLEYYAREMLRLRGFPVE 153 (512)
T ss_pred hcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHcCcCHH----HHH--------HHHHHHHHHHHHHHHHHHHhcCcccc
Confidence 999999999999999999999999999999887765432 222 1344444444444432211 122221
Q ss_pred ccccCCCeEEEEeeeceeEEEEEcCC-Chh-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCce
Q 005074 387 RTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLI 463 (715)
Q Consensus 387 ~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGN~vvlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv 463 (715)
. ..+...+++++|+|||++|+|| ||. +.+++++|||++||+||+|||+.||+++..+++++.+ + +|+|++
T Consensus 154 ~---~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~----aGlP~gvv 226 (512)
T cd07124 154 M---VPGEDNRYVYRPLGVGAVISPWNFPLAILAGMTTAALVTGNTVVLKPAEDTPVIAAKLVEILEE----AGLPPGVV 226 (512)
T ss_pred C---CCCceeEEEEecceEEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCccccHHHHHHHHHHHH----hCcCCCce
Confidence 1 1234567889999999999998 685 5679999999999999999999999999999999986 7 999999
Q ss_pred EEecC-cchhhHhhcCCCCccEEEeecCHHHHHHHHhhc---------CCCEEEecCCcceEEEcCCCCHHHHHHHHHhh
Q 005074 464 GLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST---------KIPVLGHADGICHVYVDKSANLDVAKNIVIDA 533 (715)
Q Consensus 464 ~vv~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a---------~~~~~lElGGk~p~iV~~dADl~~A~~~iv~~ 533 (715)
|+|++ +.++++.|..||++|+|+||||+.+|+.|++.+ .||+++|||||||+||++|||+|.|++.++++
T Consensus 227 ~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~~~~l~~~~lElgGk~p~iV~~daDl~~Aa~~i~~~ 306 (512)
T cd07124 227 NFLPGPGEEVGDYLVEHPDVRFIAFTGSREVGLRIYERAAKVQPGQKWLKRVIAEMGGKNAIIVDEDADLDEAAEGIVRS 306 (512)
T ss_pred EEeccCchHHHHHHhcCCCCCEEEEeCchHHHHHHHHHHhcccccccCCCcEEEECCCCCeEEECCCCCHHHHHHHHHHH
Confidence 99995 556888899999999999999999999998765 36999999999999999999999999999999
Q ss_pred ccCCCc-cccccceEEEcCcccCchhHHHHHHHHHhcCCe---------------------------------E-ecCcc
Q 005074 534 KIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGVG---------------------------------L-FGGPR 578 (715)
Q Consensus 534 ~f~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~~---------------------------------~-~g~~~ 578 (715)
+|.|+| .|+|++|||||+++| |+|+++|+++++++.+. + .|+..
T Consensus 307 ~f~~~GQ~C~a~~rv~V~~~i~-~~f~~~l~~~~~~~~~g~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~g~~vl~gG~~ 385 (512)
T cd07124 307 AFGFQGQKCSACSRVIVHESVY-DEFLERLVERTKALKVGDPEDPEVYMGPVIDKGARDRIRRYIEIGKSEGRLLLGGEV 385 (512)
T ss_pred HHhhCCCccccceEEEEcHHHH-HHHHHHHHHHHHhCCCCCCCCCCCcccCCcCHHHHHHHHHHHHHHHhCCEEEecCcc
Confidence 999987 999999999999999 79999999999876321 1 23322
Q ss_pred c----ccc-c-c-C-----CCCCCccccccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEecCHHHHHHHHHhcCcceE
Q 005074 579 A----SKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAV 646 (715)
Q Consensus 579 ~----~~~-~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~i~t~d~~~~~~~~~~l~~G~V 646 (715)
. .++ + | | +++++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.++++++++|+|
T Consensus 386 ~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v 465 (512)
T cd07124 386 LELAAEGYFVQPTIFADVPPDHRLAQEEIFGPVLAVIKAKDFDEALEIANDTEYGLTGGVFSRSPEHLERARREFEVGNL 465 (512)
T ss_pred CCCCCCCceEcCEEEecCCCCChHHhCCCcCCeEEEEecCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCcceE
Confidence 1 233 3 6 2 3589999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCCCCCC--CCCccCCcccccccccccccccccccccceEEEEEEEc
Q 005074 647 FHNASTRFC--DGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRG 693 (715)
Q Consensus 647 ~iN~~~~~~--~~~pfG~g~~sG~~~~~~~~~g~~gl~~ft~~K~v~~~ 693 (715)
+||++.... +.+||||.|+||+|. +++|++|+++||+.|+|.+.
T Consensus 466 ~vN~~~~~~~~~~~PfGG~k~SG~G~---~~~g~~~~~~~t~~k~v~~~ 511 (512)
T cd07124 466 YANRKITGALVGRQPFGGFKMSGTGS---KAGGPDYLLQFMQPKTVTEN 511 (512)
T ss_pred EECCCCCCCCCCCCCCCccccccCCC---ccCcHHHHHHhccEEEEEEe
Confidence 999876432 458999999999851 24589999999999999874
No 57
>cd07141 ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like. NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism.
Probab=100.00 E-value=1.9e-72 Score=634.61 Aligned_cols=396 Identities=17% Similarity=0.193 Sum_probs=336.4
Q ss_pred HHHHcCCcceeEEecCCcccccHhhHHHHHHHHHHHHH---HHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
Q 005074 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSR---RLQALQSQDRRKILLDVADALEANESLIKVENEADVAAA 344 (715)
Q Consensus 268 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~---~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~ 344 (715)
.+|.||+.++++...+ .+++++++++|++||+ .|+++|.++|.++|++++++|+++.++|++++.+|.+++
T Consensus 27 ~~P~tg~~i~~~~~~~------~~~v~~av~~A~~A~~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~ 100 (481)
T cd07141 27 INPATGEKICEVQEGD------KADVDKAVKAARAAFKLGSPWRTMDASERGRLLNKLADLIERDRAYLASLETLDNGKP 100 (481)
T ss_pred ECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHhhccCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCc
Confidence 5678999999998888 8999999999999998 699999999999999999999999999999887665543
Q ss_pred HhhchhHHHHHHhhcChhHHHHHHHHHHHHhccccc-ccccccccccCCCeEEEEeeeceeEEEEEcCC-Chh-hHHHHH
Q 005074 345 QEAGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIA 421 (715)
Q Consensus 345 ~~~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~ 421 (715)
.. ++. ..++..+++.++++++..+. .+...+. ..+...+++++|+|||++|+|| ||. +.++++
T Consensus 101 ~~----~~~-------~~ev~~~~~~l~~~a~~~~~~~g~~~~~---~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~ 166 (481)
T cd07141 101 FS----KSY-------LVDLPGAIKVLRYYAGWADKIHGKTIPM---DGDFFTYTRHEPVGVCGQIIPWNFPLLMAAWKL 166 (481)
T ss_pred hH----HHH-------HHHHHHHHHHHHHHHHHHHHhcCceecC---CCCceEEEEEeceeEEEEEccChhHHHHHHHHH
Confidence 21 111 12455666666666543322 2322221 1223457889999999999998 686 458999
Q ss_pred HHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-cchhhHhhcCCCCccEEEeecCHHHHHHHHh
Q 005074 422 SLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKE 499 (715)
Q Consensus 422 ~~ALaaGN~vvlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~ 499 (715)
++||++||+||+|||+.+|+|+..+++++.+ + ||+|++|+|++ +.++++.|..||+||+|+||||+.+|+.|++
T Consensus 167 ~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~----aGlP~gvv~~v~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~~ 242 (481)
T cd07141 167 APALACGNTVVLKPAEQTPLTALYLASLIKE----AGFPPGVVNVVPGYGPTAGAAISSHPDIDKVAFTGSTEVGKLIQQ 242 (481)
T ss_pred HHHHHcCCEEEEeCCCCCcHHHHHHHHHHHH----cCcCccceEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHH
Confidence 9999999999999999999999999999986 8 99999999996 5567888899999999999999999999987
Q ss_pred hcC----CCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccCchhHHHHHHHHHhcCC---
Q 005074 500 STK----IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV--- 571 (715)
Q Consensus 500 ~a~----~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~f~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~--- 571 (715)
.++ ||+++|||||||+||++|||++.|++.+++|+|.|+| .|+|++|||||+++| |+|+++|+++++++.+
T Consensus 243 ~aa~~~~~~~~lElGG~~~~iV~~dADl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~G~p 321 (481)
T cd07141 243 AAGKSNLKRVTLELGGKSPNIVFADADLDYAVEQAHEALFFNMGQCCCAGSRTFVQESIY-DEFVKRSVERAKKRVVGNP 321 (481)
T ss_pred HhhhhcCceEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCcccCCeEEEEcHHHH-HHHHHHHHHHHHhCCCCCC
Confidence 653 7999999999999999999999999999999999987 999999999999999 7999999998887522
Q ss_pred -------------------------------eE-ecCccc--cc-cc-c-C-----CCCCCccccccCceEEEEEeCCHH
Q 005074 572 -------------------------------GL-FGGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVR 609 (715)
Q Consensus 572 -------------------------------~~-~g~~~~--~~-~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~d 609 (715)
++ .|+... .+ ++ | | +++++++||+||||++|++|+|+|
T Consensus 322 ~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~ 401 (481)
T cd07141 322 FDPKTEQGPQIDEEQFKKILELIESGKKEGAKLECGGKRHGDKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIFKFKTID 401 (481)
T ss_pred CCCCCCCcCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEeeEEEecCCCCChhhhccccCCeEEEEeeCCHH
Confidence 11 233221 12 33 5 2 358899999999999999999999
Q ss_pred HHHHHHHhcCCCceeEEEecCHHHHHHHHHhcCcceEEEcCCCCCCCCCccCCcccccccccccccccccccccceEEEE
Q 005074 610 AAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRW 689 (715)
Q Consensus 610 eAi~~aN~~~~GL~a~i~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~~~pfG~g~~sG~~~~~~~~~g~~gl~~ft~~K~ 689 (715)
|||+++|+++|||++||||+|.+++.+|++++++|+|+||++....+.+||||.|+||+| +++|++|+++||+.|+
T Consensus 402 eai~~~n~~~~gLs~~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G----~~~g~~~~~~ft~~k~ 477 (481)
T cd07141 402 EVIERANNTTYGLAAAVFTKDIDKAITFSNALRAGTVWVNCYNVVSPQAPFGGYKMSGNG----RELGEYGLQEYTEVKT 477 (481)
T ss_pred HHHHHHhCCCccceEEEECCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCCCCcccCcCC----ccchHHHHHHHhheEE
Confidence 999999999999999999999999999999999999999987766778899999999986 3568999999999999
Q ss_pred EEE
Q 005074 690 ILR 692 (715)
Q Consensus 690 v~~ 692 (715)
+++
T Consensus 478 v~~ 480 (481)
T cd07141 478 VTI 480 (481)
T ss_pred EEE
Confidence 875
No 58
>TIGR01804 BADH glycine betaine aldehyde dehydrogenase. Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171).
Probab=100.00 E-value=1e-72 Score=635.40 Aligned_cols=393 Identities=16% Similarity=0.191 Sum_probs=335.7
Q ss_pred HHHHHcCCcceeEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHh
Q 005074 267 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 346 (715)
Q Consensus 267 l~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~ 346 (715)
..+|.+|+.++.+..++ .+|+++++++|++||+.|+++|.++|.++|++++++|++++++|++++.+|.+++.
T Consensus 17 ~~nP~t~~~i~~~~~~~------~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~- 89 (467)
T TIGR01804 17 IINPANQEVIATVAEAT------REDVERAIAAARRAQGEWASMTPEERGRILRRIAELIRERNEELAKLETLDTGKTL- 89 (467)
T ss_pred eECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH-
Confidence 35688999999998888 89999999999999999999999999999999999999999999999887765542
Q ss_pred hchhHHHHHHhhcChhHHHHHHHHHHHHhcccccc-cccccccccCCCeEEEEeeeceeEEEEEcCC-Chh-hHHHHHHH
Q 005074 347 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEPI-GQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 423 (715)
Q Consensus 347 ~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ 423 (715)
.++. ..+++.+++.++++++..+.. +...+. ......+++|+|+|||++|+|| ||. +.+++++|
T Consensus 90 ---~~a~-------~~ev~~~~~~l~~~a~~~~~~~~~~~~~---~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ 156 (467)
T TIGR01804 90 ---EETS-------VADMDDIADVFEFFAGLADKDGGEIIPL---PIPSFSYTIREPLGVCVGIGAWNYPLQIASWKIAP 156 (467)
T ss_pred ---HHHh-------HHHHHHHHHHHHHHHHHHHHhCCccccC---CCCceEEEEEeeeeEEEEECCCchHHHHHHHHHHH
Confidence 1221 135666777777766543322 322211 1113457889999999999998 585 56799999
Q ss_pred HHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-cchhhHhhcCCCCccEEEeecCHHHHHHHHhhc
Q 005074 424 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST 501 (715)
Q Consensus 424 ALaaGN~vvlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a 501 (715)
||++||+||+|||+.||.++..+++++.+ + +|+|++|+|++ +.++++.|..||+||+|+||||+++|+.|++++
T Consensus 157 ALaaGN~VvlKps~~tp~~~~~l~~~~~~----aglP~gv~~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~a 232 (467)
T TIGR01804 157 ALAAGNAMVFKPSEITPLTALKVAELMEE----AGLPDGVFNVVLGKGAEVGEPLVNHKDVAKVSFTGGVPTGKKIMAAA 232 (467)
T ss_pred HHhcCCEEEeeCCccCcHHHHHHHHHHHH----cCcCcCcEEEEeCCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHH
Confidence 99999999999999999999999999986 8 99999999995 467888889999999999999999999999887
Q ss_pred C---CCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccCchhHHHHHHHHHhcCC------
Q 005074 502 K---IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------ 571 (715)
Q Consensus 502 ~---~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~f~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~------ 571 (715)
. ||+++|||||||+||++|||||.|++.+++++|.|+| .|+|++|||||+++| |+|+++|+++++++.+
T Consensus 233 ~~~l~~~~lElGG~~~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~g~p~~~ 311 (467)
T TIGR01804 233 ADHLKHVTMELGGKSPLIVFDDADLELAVDQAMNGNFFSAGQVCSNGTRVFVHNKIK-EKFEARLVERTKRIKLGDGFDE 311 (467)
T ss_pred HhcCCcEEEecCCCCeeEECCCCCHHHHHHHHHHHHHHhcCCCCCCCCEEEEcHHHH-HHHHHHHHHHHHhCCCCCCCCC
Confidence 3 8999999999999999999999999999999999987 999999999999999 7999999999876521
Q ss_pred ----------------------------eE-ecCccc------cc-cc-c-C-----CCCCCccccccCceEEEEEeCCH
Q 005074 572 ----------------------------GL-FGGPRA------SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDV 608 (715)
Q Consensus 572 ----------------------------~~-~g~~~~------~~-~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~ 608 (715)
++ .|+... .+ ++ | | +++++++||+||||++|++|+|+
T Consensus 312 ~~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~ 391 (467)
T TIGR01804 312 ATEMGPLISAEHRDKVESYIEKGKEEGATLACGGKRPEREGLQNGFFIEPTVFTDCTDDMTIVREEIFGPVMTVLTFSSE 391 (467)
T ss_pred CCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCeEEeeEEEeCCCCCChHHhCCCCCceEEEEecCCH
Confidence 12 233221 12 23 5 2 36889999999999999999999
Q ss_pred HHHHHHHHhcCCCceeEEEecCHHHHHHHHHhcCcceEEEcCCCCCCCCCccCCcccccccccccccccccccccceEEE
Q 005074 609 RAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTR 688 (715)
Q Consensus 609 deAi~~aN~~~~GL~a~i~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~~~pfG~g~~sG~~~~~~~~~g~~gl~~ft~~K 688 (715)
||||+++|+++|||++||||+|.+++++|++++++|+|+||++....+..||||.|+||+| +++|.+|+++||+.|
T Consensus 392 deai~~~n~~~~gLsa~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G----~~~g~~~~~~~~~~~ 467 (467)
T TIGR01804 392 DEVIARANDTIYGLAAGVFTADLGRAHRVANQLKAGTVWINDFHPYPAEAPWGGYKQSGIG----RENGKAGLAEYTEVK 467 (467)
T ss_pred HHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccCccC----CCChHHHHHHHhccC
Confidence 9999999999999999999999999999999999999999997766677899999999986 356999999999875
No 59
>cd07119 ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like. Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde.
Probab=100.00 E-value=1.9e-72 Score=635.62 Aligned_cols=398 Identities=20% Similarity=0.230 Sum_probs=339.0
Q ss_pred HHHHHcCCcceeEEecCCcccccHhhHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
Q 005074 267 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSR--RLQALQSQDRRKILLDVADALEANESLIKVENEADVAAA 344 (715)
Q Consensus 267 l~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~ 344 (715)
..+|.+|+.++++...+ .+|+++++++|++||+ .|+++|..+|.++|++++++|++++++|++++++|++++
T Consensus 17 ~~~P~tg~~i~~~~~~~------~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~ 90 (482)
T cd07119 17 IINPANGEVIATVPEGT------AEDAKRAIAAARRAFDSGEWPHLPAQERAALLFRIADKIREDAEELARLETLNTGKT 90 (482)
T ss_pred eeCCCCCCEEEEEeCCC------HHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCC
Confidence 35688999999998888 8999999999999997 599999999999999999999999999999988776543
Q ss_pred HhhchhHHHHHHhhcChhHHHHHHHHHHHHhcccc-cccccccccccCCCeEEEEeeeceeEEEEEcCC-Chh-hHHHHH
Q 005074 345 QEAGYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIA 421 (715)
Q Consensus 345 ~~~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~ 421 (715)
. .++. .|+..+++.+++++...+ ..+...+. ..+...+++++|+|||++|+|| ||. +.++++
T Consensus 91 ~----~~a~--------~ev~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~ 155 (482)
T cd07119 91 L----RESE--------IDIDDVANCFRYYAGLATKETGEVYDV---PPHVISRTVREPVGVCGLITPWNYPLLQAAWKL 155 (482)
T ss_pred H----HHHH--------HHHHHHHHHHHHHHHHHHHhcCccccC---CCCceEEEEEeeeeeEEEEcCCchHHHHHHHHH
Confidence 2 1222 245556666666554332 22332221 1244567899999999999998 685 567999
Q ss_pred HHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-cchhhHhhcCCCCccEEEeecCHHHHHHHHh
Q 005074 422 SLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKE 499 (715)
Q Consensus 422 ~~ALaaGN~vvlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~ 499 (715)
+|||++||+||+|||+.+|.|+..+++++.+ + +|+|++|+|++ ++++++.|..||++|+|+||||+++|++|++
T Consensus 156 ~~ALaaGN~VilKps~~~p~~~~~l~~~~~~----aGlP~gv~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~ 231 (482)
T cd07119 156 APALAAGNTVVIKPSEVTPLTTIALFELIEE----AGLPAGVVNLVTGSGATVGAELAESPDVDLVSFTGGTATGRSIMR 231 (482)
T ss_pred HHHHhcCCEEEEECCccccHHHHHHHHHHHH----cCCCcCcEEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHH
Confidence 9999999999999999999999999999986 8 99999999995 5557888889999999999999999999998
Q ss_pred hc---CCCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccCchhHHHHHHHHHhcCC----
Q 005074 500 ST---KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV---- 571 (715)
Q Consensus 500 ~a---~~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~f~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~---- 571 (715)
++ .+|+++|||||||+||++|||||.|++.+++++|.|+| .|++++|||||+++| |+|+++|+++++++.+
T Consensus 232 ~aa~~~~~~~lElGGkn~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~-d~f~~~l~~~~~~~~~G~~~ 310 (482)
T cd07119 232 AAAGNVKKVALELGGKNPNIVFADADFETAVDQALNGVFFNAGQVCSAGSRLLVEESIH-DKFVAALAERAKKIKLGNGL 310 (482)
T ss_pred HHHhcCCcEEEECCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHH-HHHHHHHHHHHHhcCCCCCC
Confidence 77 38999999999999999999999999999999999977 999999999999999 7999999999887631
Q ss_pred ------------------------------eE-ecCccc------ccc-c-c-C-----CCCCCccccccCceEEEEEeC
Q 005074 572 ------------------------------GL-FGGPRA------SKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVD 606 (715)
Q Consensus 572 ------------------------------~~-~g~~~~------~~~-~-p-v-----~~~~~~~eE~FGPVl~v~~~~ 606 (715)
++ .|+... .++ + | | +++++++||+||||++|++|+
T Consensus 311 ~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~ 390 (482)
T cd07119 311 DADTEMGPLVSAEHREKVLSYIQLGKEEGARLVCGGKRPTGDELAKGYFVEPTIFDDVDRTMRIVQEEIFGPVLTVERFD 390 (482)
T ss_pred CCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCceECCEEEecCCCCChHhhCCCCCceEEEeccC
Confidence 11 233221 122 3 5 2 367899999999999999999
Q ss_pred CHHHHHHHHHhcCCCceeEEEecCHHHHHHHHHhcCcceEEEcCCCCCCCCCccCCcccccccccccccccccccccceE
Q 005074 607 DVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLT 686 (715)
Q Consensus 607 ~~deAi~~aN~~~~GL~a~i~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~~~pfG~g~~sG~~~~~~~~~g~~gl~~ft~ 686 (715)
|+||||+++|+++|||++||||+|.+++.++++++++|+|+||++....+.+||||.+.||+| +++|++|+++||+
T Consensus 391 ~~deai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G----~~~G~~~l~~~t~ 466 (482)
T cd07119 391 TEEEAIRLANDTPYGLAGAVWTKDIARANRVARRLRAGTVWINDYHPYFAEAPWGGYKQSGIG----RELGPTGLEEYQE 466 (482)
T ss_pred CHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCcccCcCC----ccchHHHHHHHhc
Confidence 999999999999999999999999999999999999999999987666677899999999985 3569999999999
Q ss_pred EEEEEEcC
Q 005074 687 TRWILRGN 694 (715)
Q Consensus 687 ~K~v~~~~ 694 (715)
.|++++..
T Consensus 467 ~k~v~~~~ 474 (482)
T cd07119 467 TKHININL 474 (482)
T ss_pred eEEEEEec
Confidence 99998864
No 60
>cd07118 ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydrogenase-like. Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase.
Probab=100.00 E-value=1.5e-72 Score=631.21 Aligned_cols=394 Identities=21% Similarity=0.240 Sum_probs=336.4
Q ss_pred HHHcCCcceeEEecCCcccccHhhHHHHHHHHHHHHHH--HhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHh
Q 005074 269 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRR--LQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 346 (715)
Q Consensus 269 ~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~--w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~ 346 (715)
+|.+++.++++..++ .+|+++++++|++||+. |+++|.++|.++|++++++|++|+++|++++.+|++++.
T Consensus 3 ~P~t~~~i~~~~~~~------~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~l~~~a~~l~~~~~~la~~~~~e~Gk~~- 75 (454)
T cd07118 3 SPAHGVVVARYAEGT------VEDVDAAVAAARKAFDKGPWPRMSGAERAAVLLKVADLIRARRERLALIETLESGKPI- 75 (454)
T ss_pred CCCCCCEEEEEeCCC------HHHHHHHHHHHHHHcCCCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH-
Confidence 477899999999888 89999999999999985 999999999999999999999999999999887765432
Q ss_pred hchhHHHHHHhhcChhHHHHHHHHHHHHhcccc-cccccccccccCCCeEEEEeeeceeEEEEEcCC-Chh-hHHHHHHH
Q 005074 347 AGYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 423 (715)
Q Consensus 347 ~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ 423 (715)
.++ ..|++.+++.+++++...+ ..+...+. ...+...++.|+|+|||++|+|| ||. +.++++++
T Consensus 76 ---~~a--------~~ev~~~i~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~i~~ 142 (454)
T cd07118 76 ---SQA--------RGEIEGAADLWRYAASLARTLHGDSYNN--LGDDMLGLVLREPIGVVGIITPWNFPFLILSQKLPF 142 (454)
T ss_pred ---HHH--------HHHHHHHHHHHHHHHHHHHHhcCccccc--CCCCceeeEEeecceEEEEECCCCcHHHHHHHHHHH
Confidence 122 2356666666666654322 12222211 11234457889999999999998 685 56799999
Q ss_pred HHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-cchhhHhhcCCCCccEEEeecCHHHHHHHHhhc
Q 005074 424 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST 501 (715)
Q Consensus 424 ALaaGN~vvlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a 501 (715)
||++||+||+|||+.+|.++..+++++.+ + +|+|++|+|++ +.++++.|..||+||+|+||||+++|+.|++.+
T Consensus 143 ALaaGN~Vi~Kps~~~p~~~~~l~~~~~~----aG~P~g~~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a 218 (454)
T cd07118 143 ALAAGCTVVVKPSEFTSGTTLMLAELLIE----AGLPAGVVNIVTGYGATVGQAMTEHPDVDMVSFTGSTRVGKAIAAAA 218 (454)
T ss_pred HHhcCCEEEEECCCCCcHHHHHHHHHHHh----cCCCccceEEEecCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHH
Confidence 99999999999999999999999999986 8 99999999995 556788888999999999999999999998876
Q ss_pred ---CCCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccCchhHHHHHHHHHhcCC------
Q 005074 502 ---KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------ 571 (715)
Q Consensus 502 ---~~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~f~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~------ 571 (715)
.+|+++|||||||+||++|||+|.|++.+++++|.|+| .|+|++|||||+++| |+|+++|+++++++.+
T Consensus 219 a~~~~~~~lelgG~n~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~-d~f~~~L~~~~~~l~~g~p~~~ 297 (454)
T cd07118 219 ARNLKKVSLELGGKNPQIVFADADLDAAADAVVFGVYFNAGECCNSGSRLLVHESIA-DAFVAAVVARSRKVRVGDPLDP 297 (454)
T ss_pred HhcCCcEEeccCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCCCCceEEEcHHHH-HHHHHHHHHHHHhcCcCCCCCC
Confidence 38999999999999999999999999999999999976 999999999999999 7999999999887632
Q ss_pred ----------------------------eE-ecCccc---ccc-c-c-C-----CCCCCccccccCceEEEEEeCCHHHH
Q 005074 572 ----------------------------GL-FGGPRA---SKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAA 611 (715)
Q Consensus 572 ----------------------------~~-~g~~~~---~~~-~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deA 611 (715)
++ .|+... .++ + | | +++++++||+||||++|++|+|+|||
T Consensus 298 ~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~ea 377 (454)
T cd07118 298 ETKVGAIINEAQLAKITDYVDAGRAEGATLLLGGERLASAAGLFYQPTIFTDVTPDMAIAREEIFGPVLSVLTFDTVDEA 377 (454)
T ss_pred CCcCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCCCCCCCCCeEEeCEEEeCCCCCCHHHhCCCCCceEEEEEECCHHHH
Confidence 11 133221 122 3 5 2 35789999999999999999999999
Q ss_pred HHHHHhcCCCceeEEEecCHHHHHHHHHhcCcceEEEcCCCCCCCCCccCCcccccccccccccccccccccceEEEEEE
Q 005074 612 IDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 691 (715)
Q Consensus 612 i~~aN~~~~GL~a~i~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~~~pfG~g~~sG~~~~~~~~~g~~gl~~ft~~K~v~ 691 (715)
|+++|+++|||++||||+|.++++++++++++|.|+||+.....+..||||.+.||+| +++|++|+++||+.|++.
T Consensus 378 i~~~n~~~~gL~~~vft~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~PfgG~~~SG~G----~~~g~~~l~~~t~~k~~~ 453 (454)
T cd07118 378 IALANDTVYGLSAGVWSKDIDTALTVARRIRAGTVWVNTFLDGSPELPFGGFKQSGIG----RELGRYGVEEYTELKTVH 453 (454)
T ss_pred HHHHhCCCccceEEEECCCHHHHHHHHHhcCcCEEEECCCCCCCCCCCcCCcccccCC----cCchHHHHHHHhceeEEe
Confidence 9999999999999999999999999999999999999998777778899999999985 356999999999999975
No 61
>cd07125 ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA. The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes.
Probab=100.00 E-value=7.5e-72 Score=633.81 Aligned_cols=425 Identities=19% Similarity=0.187 Sum_probs=350.2
Q ss_pred HHHHHHHHHHcCCc--EEEEeCCCc-----chHHHHHc-CCcceeEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHH
Q 005074 242 KVNAAYCAACAGIP--VVITSGFAM-----DSIIKVLE-GKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQ 313 (715)
Q Consensus 242 Kl~aa~~a~~~gv~--v~I~~g~~~-----~~l~~~~t-g~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~ 313 (715)
-++.+++.++.+.+ +.+++|... -.+.+|.| |+.++++...+ .+|+++++++|++||+.|+.++.+
T Consensus 18 ~~~~~~~~~~~~~~~~~p~i~g~~~~~~~~~~v~~P~t~g~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~ 91 (518)
T cd07125 18 ALADALKAFDEKEWEAIPIINGEETETGEGAPVIDPADHERTIGEVSLAD------AEDVDAALAIAAAAFAGWSATPVE 91 (518)
T ss_pred HHHHHHHHhhhcCcccCceECCEEeeCCCeEEEECCCCCCceEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHH
Confidence 45567777776633 556665432 23478999 99999999888 899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhhchhHHHHHHhhcChhHHHHHHHHHHHHhcccc-ccccc-ccccccC
Q 005074 314 DRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQI-LKRTELA 391 (715)
Q Consensus 314 ~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~g~~-~~~~~~~ 391 (715)
+|.++|++++++|++++++|++++++|++++.. ++. .|+..+++.++++++..+ ..+.. .+. +
T Consensus 92 ~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~----~a~--------~ev~~~i~~l~~~~~~~~~~~~~~~~~~---~ 156 (518)
T cd07125 92 ERAEILEKAADLLEANRGELIALAAAEAGKTLA----DAD--------AEVREAIDFCRYYAAQARELFSDPELPG---P 156 (518)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH----HHH--------HHHHHHHHHHHHHHHHHHHhcCCccccC---C
Confidence 999999999999999999999999887765432 221 134444444444433221 11111 111 1
Q ss_pred CCeEEEEeeeceeEEEEEcCC-Chh-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC
Q 005074 392 DGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS 468 (715)
Q Consensus 392 ~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGN~vvlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~ 468 (715)
.+...+++++|+|||++|+|| ||. +.++++++||++||+||+|||+.||+++..+++++.+ + ||+|++|+|++
T Consensus 157 ~g~~~~~~~~P~GVV~~I~p~N~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~ll~e----aGlP~gvv~vv~g 232 (518)
T cd07125 157 TGELNGLELHGRGVFVCISPWNFPLAIFTGQIAAALAAGNTVIAKPAEQTPLIAARAVELLHE----AGVPRDVLQLVPG 232 (518)
T ss_pred CCceeEEEEecccEEEEECCcchHHHHHHHHHHHHHHcCCEEEEeCCCcCcHHHHHHHHHHHH----cCCCCCcEEEEec
Confidence 234557889999999999998 685 5679999999999999999999999999999999986 8 99999999995
Q ss_pred -cchhhHhhcCCCCccEEEeecCHHHHHHHHhhc------CCCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-c
Q 005074 469 -REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST------KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-A 540 (715)
Q Consensus 469 -~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a------~~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~f~n~g-~ 540 (715)
++++++.|..||+||+|+||||+++|++|++.+ .+|+++|||||||+||++|||+|+|++.+++|+|.|+| +
T Consensus 233 ~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~~~v~lElgGk~p~iV~~dADl~~Aa~~iv~g~f~nsGQ~ 312 (518)
T cd07125 233 DGEEIGEALVAHPRIDGVIFTGSTETAKLINRALAERDGPILPLIAETGGKNAMIVDSTALPEQAVKDVVQSAFGSAGQR 312 (518)
T ss_pred CchhhHHHHhcCCCcCEEEEECCHHHHHHHHHHhhhccCCCceEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence 455788888999999999999999999998865 37999999999999999999999999999999999987 9
Q ss_pred ccccceEEEcCcccCchhHHHHHHHHHhcCCe---------------------------------E-ecCccc--cc-cc
Q 005074 541 CNAMETLLVHKDLACNGALNELVVELQHEGVG---------------------------------L-FGGPRA--SK-LL 583 (715)
Q Consensus 541 C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~~---------------------------------~-~g~~~~--~~-~~ 583 (715)
|+|++|+|||+++| |+|+++|+++++++.+. + .|+... .+ ++
T Consensus 313 C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~~~vl~gg~~~~~~g~~~ 391 (518)
T cd07125 313 CSALRLLYLQEEIA-ERFIEMLKGAMASLKVGDPWDLSTDVGPLIDKPAGKLLRAHTELMRGEAWLIAPAPLDDGNGYFV 391 (518)
T ss_pred CCCCeEEEEcchhH-HHHHHHHHHHHhcCCccCCCCCCCCcCCCcCHHHHHHHHHHHHHHHhCCEEEeCCCcCCCCCeEE
Confidence 99999999999999 79999999999876321 0 122111 12 22
Q ss_pred -c-C---CCCCCccccccCceEEEEEeC--CHHHHHHHHHhcCCCceeEEEecCHHHHHHHHHhcCcceEEEcCCCCCC-
Q 005074 584 -Q-I---PETRLFHHEYNSMVCTVEIVD--DVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFC- 655 (715)
Q Consensus 584 -p-v---~~~~~~~eE~FGPVl~v~~~~--~~deAi~~aN~~~~GL~a~i~t~d~~~~~~~~~~l~~G~V~iN~~~~~~- 655 (715)
| | .++++++||+||||++|++|+ |+||||+++|+++|||++||||+|.+++++|++++++|+|+||+++...
T Consensus 392 ~Ptvl~~v~~~i~~eE~FgPVl~v~~~~~~~~deAi~~~n~~~~gLta~Vft~d~~~~~~~~~~l~~G~V~IN~~~~~~~ 471 (518)
T cd07125 392 APGIIEIVGIFDLTTEVFGPILHVIRFKAEDLDEAIEDINATGYGLTLGIHSRDEREIEYWRERVEAGNLYINRNITGAI 471 (518)
T ss_pred ccEEEeecCChHhhCcccCCeEEEEEeCCCCHHHHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCcCeEEECCCCCCCC
Confidence 5 3 268999999999999999999 9999999999999999999999999999999999999999999876532
Q ss_pred -CCCccCCcccccccccccccccccccccceEEEEEEEcCc
Q 005074 656 -DGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNG 695 (715)
Q Consensus 656 -~~~pfG~g~~sG~~~~~~~~~g~~gl~~ft~~K~v~~~~~ 695 (715)
+.+||||.|.||+|. +++|++|+++||+.|++++...
T Consensus 472 ~~~~PfGG~~~SG~G~---~~gg~~~~~~ft~~k~i~~~~~ 509 (518)
T cd07125 472 VGRQPFGGWGLSGTGP---KAGGPNYLLRFGNEKTVSLNTT 509 (518)
T ss_pred CCCCCCCCcccccCCc---ccccHHHHHHhcceEEEEEEcc
Confidence 468999999999862 2468999999999999988654
No 62
>cd07091 ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins. ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the co
Probab=100.00 E-value=3.7e-72 Score=632.39 Aligned_cols=397 Identities=17% Similarity=0.185 Sum_probs=338.0
Q ss_pred HHHHHcCCcceeEEecCCcccccHhhHHHHHHHHHHHHHHHh--cCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
Q 005074 267 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQ--ALQSQDRRKILLDVADALEANESLIKVENEADVAAA 344 (715)
Q Consensus 267 l~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~--~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~ 344 (715)
..+|.+++.++++...+ .+|+++++++|++||+.|+ ++|.++|.++|++++++|++|+++|++++.+|++++
T Consensus 23 ~~~P~t~~~i~~~~~~~------~~~v~~av~~A~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~ 96 (476)
T cd07091 23 TINPATEEVICQVAEAD------EEDVDAAVKAARAAFETGWWRKMDPRERGRLLNKLADLIERDRDELAALESLDNGKP 96 (476)
T ss_pred eECCCCCCEEEEEeCCC------HHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCC
Confidence 35688899999998888 8999999999999999854 999999999999999999999999999988776543
Q ss_pred HhhchhHHHHHHhhcChhHHHHHHHHHHHHhccccc-ccccccccccCCCeEEEEeeeceeEEEEEcCC-Chh-hHHHHH
Q 005074 345 QEAGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIA 421 (715)
Q Consensus 345 ~~~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~ 421 (715)
.. +.. ..|+..+++.+++++++.+. .+...+. ..+...+++++|+|||++|+|| ||. ++++++
T Consensus 97 ~~----~~~-------~~ev~~~~~~~~~~a~~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~ 162 (476)
T cd07091 97 LE----ESA-------KGDVALSIKCLRYYAGWADKIQGKTIPI---DGNFLAYTRREPIGVCGQIIPWNFPLLMLAWKL 162 (476)
T ss_pred HH----HHH-------HHHHHHHHHHHHHHHHHHHHhcCccccC---CCCceEEEEEeceeEEEEECCCcCHHHHHHHHH
Confidence 21 111 13566677777766654322 2332221 1244567899999999999998 685 567899
Q ss_pred HHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-cchhhHhhcCCCCccEEEeecCHHHHHHHHh
Q 005074 422 SLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKE 499 (715)
Q Consensus 422 ~~ALaaGN~vvlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~ 499 (715)
+|||++||+||+|||+.+|.++..+++++.+ + ||+|++|+|++ +.++++.|..||++|+|+||||+.+|+.|++
T Consensus 163 ~~AL~aGN~VvlKps~~~p~~~~~l~~~~~~----aglP~g~~~~v~g~~~~~~~~L~~~~~vd~V~fTGs~~~g~~v~~ 238 (476)
T cd07091 163 APALAAGNTVVLKPAEQTPLSALYLAELIKE----AGFPPGVVNIVPGFGPTAGAAISSHMDVDKIAFTGSTAVGRTIME 238 (476)
T ss_pred HHHHHcCCEEEEeCCCCChHHHHHHHHHHHH----cCcCCCcEEEEeCCChhHHHHHhcCCCcCEEEEECcHHHHHHHHH
Confidence 9999999999999999999999999999987 8 99999999995 5667888889999999999999999999988
Q ss_pred hcC----CCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccCchhHHHHHHHHHhcCC---
Q 005074 500 STK----IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV--- 571 (715)
Q Consensus 500 ~a~----~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~f~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~--- 571 (715)
++. +|+++|||||||+||++|||||.|++.+++|+|.|+| .|+|++|||||+++| |+|+++|+++++++.+
T Consensus 239 ~aa~~~~~~~~lElgG~~~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~v~-~~f~~~L~~~~~~~~~g~p 317 (476)
T cd07091 239 AAAKSNLKKVTLELGGKSPNIVFDDADLDKAVEWAAFGIFFNQGQCCCAGSRIFVQESIY-DEFVEKFKARAEKRVVGDP 317 (476)
T ss_pred HHHhcCCceEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEeHHHH-HHHHHHHHHHHhhCCCCCC
Confidence 763 7999999999999999999999999999999999987 999999999999999 7999999999887532
Q ss_pred -------------------------------eE-ecCccc--cc-cc-c-C-----CCCCCccccccCceEEEEEeCCHH
Q 005074 572 -------------------------------GL-FGGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVR 609 (715)
Q Consensus 572 -------------------------------~~-~g~~~~--~~-~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~d 609 (715)
++ +|+... .+ ++ | | +++++++||+||||++|++|+|+|
T Consensus 318 ~~~~~~~gpli~~~~~~~v~~~i~~a~~~ga~vl~gg~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~ 397 (476)
T cd07091 318 FDPDTFQGPQVSKAQFDKILSYIESGKKEGATLLTGGERHGSKGYFIQPTVFTDVKDDMKIAKEEIFGPVVTILKFKTED 397 (476)
T ss_pred CCCCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCceECcEEecCCCCCChhhhCCCCCCeEEEeecCCHH
Confidence 11 132221 12 23 5 2 357899999999999999999999
Q ss_pred HHHHHHHhcCCCceeEEEecCHHHHHHHHHhcCcceEEEcCCCCCCCCCccCCcccccccccccccccccccccceEEEE
Q 005074 610 AAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRW 689 (715)
Q Consensus 610 eAi~~aN~~~~GL~a~i~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~~~pfG~g~~sG~~~~~~~~~g~~gl~~ft~~K~ 689 (715)
|||+++|+++|||++||||+|.++++++++++++|+|+||+++...+.+||||.|.||+| +++|++|+++||+.|+
T Consensus 398 eai~~~n~~~~gLsa~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~k~SG~G----~~~g~~~~~~f~~~k~ 473 (476)
T cd07091 398 EVIERANDTEYGLAAGVFTKDINKALRVSRALKAGTVWVNTYNVFDAAVPFGGFKQSGFG----RELGEEGLEEYTQVKA 473 (476)
T ss_pred HHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCcccCcCC----ccchHHHHHHhhceeE
Confidence 999999999999999999999999999999999999999998777778999999999985 3569999999999999
Q ss_pred EEE
Q 005074 690 ILR 692 (715)
Q Consensus 690 v~~ 692 (715)
+++
T Consensus 474 ~~~ 476 (476)
T cd07091 474 VTI 476 (476)
T ss_pred EeC
Confidence 863
No 63
>TIGR01237 D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative. This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs.
Probab=100.00 E-value=8.8e-72 Score=632.28 Aligned_cols=399 Identities=17% Similarity=0.186 Sum_probs=334.1
Q ss_pred HHHHHc-CCcceeEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
Q 005074 267 IIKVLE-GKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQ 345 (715)
Q Consensus 267 l~~~~t-g~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~ 345 (715)
..+|.+ ++.++++..++ .+|+++|+++|++||+.|+++|.++|.++|++++++|++|+++|++++++|.+++.
T Consensus 50 ~~~P~~~~~~i~~~~~~~------~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~ 123 (511)
T TIGR01237 50 SINPCDPSEVVGKVGKAS------VEQAEHALQIAKKAFEAWKKTPVRERAGILRKAAAIMERRRHELNALICLEVGKII 123 (511)
T ss_pred eECCCCCCcEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHcCCCH
Confidence 357884 88899988888 89999999999999999999999999999999999999999999999887765442
Q ss_pred hhchhHHHHHHhhcChhHHHHHHHHHHHHhcccc-cccccccccccCCCeEEEEeeeceeEEEEEcCC-Chh-hHHHHHH
Q 005074 346 EAGYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIAS 422 (715)
Q Consensus 346 ~~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~ 422 (715)
. ++. .|+...++.++++++..+ ..+...+.. ..+...+++++|+|||++|+|| ||. +.+++++
T Consensus 124 ~----~a~--------~ev~~~~~~~~~~a~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVV~~I~P~N~P~~~~~~~i~ 189 (511)
T TIGR01237 124 P----EAD--------AEVAEAIDFCEYYAREMERLAGQGVNLD--IEGETNRYFYQPRGVAVVISPWNFPMAIAVGMTV 189 (511)
T ss_pred H----HHH--------HHHHHHHHHHHHHHHHHHHhcCccccCC--CCCceeEEEEecceeEEEECCCCcHHHHHHHHHH
Confidence 1 221 244455555555543221 112211111 1234567889999999999998 685 5679999
Q ss_pred HHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-cchhhHhhcCCCCccEEEeecCHHHHHHHHhh
Q 005074 423 LAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKES 500 (715)
Q Consensus 423 ~ALaaGN~vvlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~ 500 (715)
|||++||+||+|||+.||+++..+++++.+ + +|+|++|+|++ +.++++.|..||++++|+||||+++|+.|++.
T Consensus 190 ~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~----aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~ 265 (511)
T TIGR01237 190 APIVTGNCVVLKPAETSTVIAAKIVEILIE----AGLPPGVFQFVPGKGSEVGSYLVNHPKTHLITFTGSREVGCRIYED 265 (511)
T ss_pred HHHHcCCEEEEECCCCCcHHHHHHHHHHHH----hCCCCCcEEEccCCCchhHHHHhcCCCCCeEEEECchHHHHHHHHH
Confidence 999999999999999999999999999986 7 99999999996 56788889999999999999999999999876
Q ss_pred cC---------CCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccCchhHHHHHHHHHhcC
Q 005074 501 TK---------IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEG 570 (715)
Q Consensus 501 a~---------~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~f~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~ 570 (715)
++ +|+++|||||||+||++|||+|.|++.+++++|.|+| .|+|++|+|||+++| |+|+++|+++++++.
T Consensus 266 aa~~~~~~~~~~~~~lElgG~~p~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~L~~~~~~l~ 344 (511)
T TIGR01237 266 AAKVQPGQKHLKRVIAEMGGKDAIIVDESADIEQAVAGAVYSAFGFTGQKCSACSRVVVLSPVY-DAVVERFVEATRSLN 344 (511)
T ss_pred HhcccccccccceeEeccCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCcccceEEEEehhHH-HHHHHHHHHHHHhCC
Confidence 63 6999999999999999999999999999999999987 999999999999999 799999999998763
Q ss_pred Ce----------------------------------EecCccc--ccc-c-c-C-----CCCCCccccccCceEEEEEeC
Q 005074 571 VG----------------------------------LFGGPRA--SKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVD 606 (715)
Q Consensus 571 ~~----------------------------------~~g~~~~--~~~-~-p-v-----~~~~~~~eE~FGPVl~v~~~~ 606 (715)
+. +.|+... .++ + | | ++|++++||+||||++|++|+
T Consensus 345 ~g~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~g~~l~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPVl~v~~~~ 424 (511)
T TIGR01237 345 VGPTDDPSTQVGPVIDQKSQAKIQEYIEQGKAEGELAIGGCDAPSEGYFIGPTIFKDVDRHARLAQEEIFGPVVAIIRAA 424 (511)
T ss_pred CCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCCcEEECCccCCCCCeEEcCEEEeCCCCCChHhhCCCcCCeEEEEeeC
Confidence 21 1122211 122 3 5 2 357999999999999999999
Q ss_pred CHHHHHHHHHhcCCCceeEEEecCHHHHHHHHHhcCcceEEEcCCCCC--CCCCccCCcccccccccccccccccccccc
Q 005074 607 DVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRF--CDGARFGLGAEVGISTSRIHARGPVGVEGL 684 (715)
Q Consensus 607 ~~deAi~~aN~~~~GL~a~i~t~d~~~~~~~~~~l~~G~V~iN~~~~~--~~~~pfG~g~~sG~~~~~~~~~g~~gl~~f 684 (715)
|+||||+++|+++|||++||||+|.+++.++++++++|+|+||+.... .+..||||.|.||+|. +.+|++|+++|
T Consensus 425 ~~deai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~k~SG~G~---~~~g~~~l~~~ 501 (511)
T TIGR01237 425 DFDEALEIANGTEYGLTGGVYSNTRDHIERAAAEFEVGNLYFNRTITGAIVGRQPFGGFKMSGTDS---KAGGPDYLLQF 501 (511)
T ss_pred CHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccccCCC---cCCCHHHHHHh
Confidence 999999999999999999999999999999999999999999987643 2457999999999852 24689999999
Q ss_pred eEEEEEEEc
Q 005074 685 LTTRWILRG 693 (715)
Q Consensus 685 t~~K~v~~~ 693 (715)
|+.|+|..+
T Consensus 502 ~~~k~v~~~ 510 (511)
T TIGR01237 502 MQPKTVTEN 510 (511)
T ss_pred cceEEEEEe
Confidence 999999764
No 64
>cd07098 ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and 22A1-like. Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation.
Probab=100.00 E-value=8.6e-72 Score=628.00 Aligned_cols=405 Identities=20% Similarity=0.202 Sum_probs=335.1
Q ss_pred HHHcCCcceeEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhhc
Q 005074 269 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAG 348 (715)
Q Consensus 269 ~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~g 348 (715)
+|.+|+.++++..++ .+|+++++++|++||+.|+++|.++|.++|++++++|++++++|++++..|++++.
T Consensus 2 ~P~tg~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~--- 72 (465)
T cd07098 2 DPATGQHLGSVPADT------PEDVDEAIAAARAAQREWAKTSFAERRKVLRSLLKYILENQEEICRVACRDTGKTM--- 72 (465)
T ss_pred CCCCCCeeEEeeCCC------HHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH---
Confidence 578899999998888 89999999999999999999999999999999999999999999999887765432
Q ss_pred hhHHHHHHhhcChhHHHHHHHHHHHHhcccccccccccccccCCCeEEEEeeeceeEEEEEcCC-Chh-hHHHHHHHHHH
Q 005074 349 YAKSLVSRLALKPGKISSLAKSIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIR 426 (715)
Q Consensus 349 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALa 426 (715)
.++...++..+.+.++++++..+.+.. ....+......+...+++++|+|||++|+|| +|. ..++++++||+
T Consensus 73 -~~a~~~e~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~n~P~~~~~~~~~~ALa 146 (465)
T cd07098 73 -VDASLGEILVTCEKIRWTLKHGEKALR-----PESRPGGLLMFYKRARVEYEPLGVVGAIVSWNYPFHNLLGPIIAALF 146 (465)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHhC-----CcccCCccccCCceeEEEEecceeEEEEcccCcHHHHHHHHHHHHHH
Confidence 232222222223333333333332211 1111100001123456789999999999998 585 56789999999
Q ss_pred hCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecCcchhhHhhcCCCCccEEEeecCHHHHHHHHhhc---C
Q 005074 427 SGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST---K 502 (715)
Q Consensus 427 aGN~vvlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a---~ 502 (715)
+||+||+|||+.+|+|+..+++++.++|+++ +|+|++|+|++..++++.|..||+|++|+||||+.+|+.|++.+ .
T Consensus 147 aGN~VIlKps~~~p~~~~~~~~~~~~~l~~aGlP~gvv~~v~g~~~~~~~L~~~~~v~~V~ftGs~~~g~~v~~~a~~~~ 226 (465)
T cd07098 147 AGNAIVVKVSEQVAWSSGFFLSIIRECLAACGHDPDLVQLVTCLPETAEALTSHPVIDHITFIGSPPVGKKVMAAAAESL 226 (465)
T ss_pred cCCEEEEECCCcCcHHHHHHHHHHHHHHHhcCCCCCeEEEEECCHHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999899 99999999996446788888999999999999999999998876 4
Q ss_pred CCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccCchhHHHHHHHHHhcCC----------
Q 005074 503 IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV---------- 571 (715)
Q Consensus 503 ~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~f~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~---------- 571 (715)
||+++|||||||+||++|||+|.|++.+++++|.|+| .|+|++|||||+++| |+|+++|+++++++.+
T Consensus 227 ~~~~lelgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~L~~~~~~l~~G~p~~~~~~~ 305 (465)
T cd07098 227 TPVVLELGGKDPAIVLDDADLDQIASIIMRGTFQSSGQNCIGIERVIVHEKIY-DKLLEILTDRVQALRQGPPLDGDVDV 305 (465)
T ss_pred CeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEcHHHH-HHHHHHHHHHHHhcCCCCCCCCCCCc
Confidence 8999999999999999999999999999999999987 999999999999999 7999999998877521
Q ss_pred ------------------------eE-ecCccc------ccc-c-c-C-----CCCCCccccccCceEEEEEeCCHHHHH
Q 005074 572 ------------------------GL-FGGPRA------SKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAI 612 (715)
Q Consensus 572 ------------------------~~-~g~~~~------~~~-~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi 612 (715)
++ .|+... .+. + | | +++++++||+||||++|++|+|+||||
T Consensus 306 Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai 385 (465)
T cd07098 306 GAMISPARFDRLEELVADAVEKGARLLAGGKRYPHPEYPQGHYFPPTLLVDVTPDMKIAQEEVFGPVMVVMKASDDEEAV 385 (465)
T ss_pred CCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCcCcCCCCcEEcCEEEeCCCCCCHHHhCCCcCCeEEEEEeCCHHHHH
Confidence 12 132211 122 2 5 2 357899999999999999999999999
Q ss_pred HHHHhcCCCceeEEEecCHHHHHHHHHhcCcceEEEcCCCCC--CCCCccCCcccccccccccccccccccccceEEEEE
Q 005074 613 DHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRF--CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWI 690 (715)
Q Consensus 613 ~~aN~~~~GL~a~i~t~d~~~~~~~~~~l~~G~V~iN~~~~~--~~~~pfG~g~~sG~~~~~~~~~g~~gl~~ft~~K~v 690 (715)
+++|+++|||++||||+|.+++.++++++++|.|+||..... .+..||||.|.||+| +++|++|+++||++|++
T Consensus 386 ~~~n~~~~gLsa~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~PfgG~k~SG~G----~~~g~~~~~~~~~~k~~ 461 (465)
T cd07098 386 EIANSTEYGLGASVFGKDIKRARRIASQLETGMVAINDFGVNYYVQQLPFGGVKGSGFG----RFAGEEGLRGLCNPKSV 461 (465)
T ss_pred HHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCcCccccccCC----ccChHHHHHHhheeEEE
Confidence 999999999999999999999999999999999999986432 357899999999985 35699999999999999
Q ss_pred EEc
Q 005074 691 LRG 693 (715)
Q Consensus 691 ~~~ 693 (715)
.++
T Consensus 462 ~~~ 464 (465)
T cd07098 462 TED 464 (465)
T ss_pred EEe
Confidence 763
No 65
>TIGR01236 D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehydrogenase, group 1. This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate.
Probab=100.00 E-value=7.2e-72 Score=632.89 Aligned_cols=401 Identities=19% Similarity=0.194 Sum_probs=333.9
Q ss_pred hHHHHHc-CCcceeEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH-HCHHHHHHHHHHHHHH
Q 005074 266 SIIKVLE-GKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALE-ANESLIKVENEADVAA 343 (715)
Q Consensus 266 ~l~~~~t-g~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~-~~~~~l~~~~~~d~~~ 343 (715)
.+.+|.+ |+.++++..++ .+|+++|+++|++||+.|+++|..+|.++|++++++|+ +++++|+++++.|++|
T Consensus 49 ~~~nP~t~g~~i~~~~~~~------~~~v~~av~~A~~a~~~W~~~~~~~R~~~L~k~a~~l~~~~~~~la~~~~~e~GK 122 (533)
T TIGR01236 49 DQVQPHNHQAVLAKATNAT------EEDAAKAVEAALDAKKDWSALPFYDRAAIFLKAADLLSGPYREEILAATMLGQSK 122 (533)
T ss_pred EEECCCCCCeEEEEEeCCC------HHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhhcHHHHHHHHHHHcCC
Confidence 3478886 78999998888 89999999999999999999999999999999999999 5999999998877655
Q ss_pred HHhhchhHHHHHHhhcChhHHHHHHHHHHHHhccccc-ccccccccccCCCeEEEEeeece-eEEEEEcCC-Chh-hHHH
Q 005074 344 AQEAGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPL-GVLLIVFES-RPD-ALVQ 419 (715)
Q Consensus 344 ~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~Pl-GVV~~I~p~-~P~-~~~~ 419 (715)
... ++. .+++..+++.+++++...+. .+...+. ...+...++.++|+ |||++|+|| ||. +..+
T Consensus 123 ~~~----~a~-------~e~v~~~i~~~~~~a~~a~~~~~~~~~~--~~~~~~~~~~~~P~~GVv~~I~PwN~P~~~~~~ 189 (533)
T TIGR01236 123 NVY----QAE-------IDAVAELIDFFRFNVKYARELYEQQPSE--SAPGEWNRTDYRPLEGFVYAISPFNFTAIAGNL 189 (533)
T ss_pred cHH----HHh-------HhHHHHHHHHHHHHHHHHHHhcCccccC--CCCCceeEEEEecCCCEEEEEeCCchHHHHHHH
Confidence 421 221 11355566666666543322 2222110 01234567889999 999999998 574 4668
Q ss_pred HHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-cchhhHhhcCCCCccEEEeecCHHHHHHH
Q 005074 420 IASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQI 497 (715)
Q Consensus 420 ~~~~ALaaGN~vvlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i 497 (715)
+++||| +||+||+|||++||+++..+++++.+ + ||+|+||+|+| +.++++.|..||+|++|+||||+++|+.|
T Consensus 190 ~~a~AL-aGN~VVlKPs~~tp~~~~~l~~~~~~----aGlP~gvv~vv~g~~~~~g~~Lv~~p~v~~V~FTGS~~~G~~i 264 (533)
T TIGR01236 190 PGAPAL-MGNTVIWKPSITATLSNYLTMRILEE----AGLPPGVINFVPGDGFAVSDVVLADPRLAGIHFTGSTATFKHL 264 (533)
T ss_pred HHHHHH-hCCeEEEECCCcCCHHHHHHHHHHHh----cCCCCCcEEEEecCcHHHHHHHhcCCCcCEEEEECCHHHHHHH
Confidence 999999 89999999999999999999999986 8 99999999996 56688888899999999999999999999
Q ss_pred HhhcC---C------CEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccCchhHHHHHHHHH
Q 005074 498 KESTK---I------PVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQ 567 (715)
Q Consensus 498 ~~~a~---~------~~~lElGGk~p~iV~~dADl~~A~~~iv~~~f~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~ 567 (715)
++.++ + ++++|||||||+||++|||+|.|++.+++|+|.|+| +|+|++|+|||++|| |+|+++|+++++
T Consensus 265 ~~~aa~~l~~~~~~~~v~lElGGknp~IV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~ 343 (533)
T TIGR01236 265 WKWVASNLDRYHNFPRIVGETGGKDFHVVHPSADIDHAVTATIRGAFEYQGQKCSAASRLYVPHSVW-PRFKDELLAELA 343 (533)
T ss_pred HHHHHhhccccccCCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhhCCCCCcCCeeEEEchhHH-HHHHHHHHHHHh
Confidence 88763 4 499999999999999999999999999999999987 999999999999999 799999999988
Q ss_pred hcCC------------------------------------eE-ecCccc--cccc--c-C-----CCCCCccccccCceE
Q 005074 568 HEGV------------------------------------GL-FGGPRA--SKLL--Q-I-----PETRLFHHEYNSMVC 600 (715)
Q Consensus 568 ~~~~------------------------------------~~-~g~~~~--~~~~--p-v-----~~~~~~~eE~FGPVl 600 (715)
++.+ ++ +|+... .++| | | +++++++||+||||+
T Consensus 344 ~l~~G~p~d~~t~~Gpli~~~~~~~v~~~i~~a~~~Ga~a~vl~GG~~~~~~G~~~~PTvl~~~~~d~~i~~eE~FGPVl 423 (533)
T TIGR01236 344 EVKVGDPDDFSNFMGAVIDERSFVKNVKYIERAKGDPAELTILYGGKYDDSEGYFVEPTVILSKDPTDPLMVEEIFGPVL 423 (533)
T ss_pred cCCcCCCCCCCCcccccCCHHHHHHHHHHHHHHHhcCCceEEEeCCCcCCCCCeEEeeEEEecCCCCChhhcccCCCCeE
Confidence 7621 11 123221 1333 5 2 368999999999999
Q ss_pred EEEEeCC--HHHHHHHH-HhcCCCceeEEEecCHHHHHHHHHhcC--cceEEEcCCCCCC--CCCccCCccccccccccc
Q 005074 601 TVEIVDD--VRAAIDHI-HQHGSAHTDCIVAEDQKVAETFLCQVD--SAAVFHNASTRFC--DGARFGLGAEVGISTSRI 673 (715)
Q Consensus 601 ~v~~~~~--~deAi~~a-N~~~~GL~a~i~t~d~~~~~~~~~~l~--~G~V~iN~~~~~~--~~~pfG~g~~sG~~~~~~ 673 (715)
+|++|+| +||||+++ |+++|||++||||+|.+++.+++++++ +|+|+||+..... +..||||.|.||+|.
T Consensus 424 ~v~~~~~~~~~eai~~~~n~~~~gL~a~Vft~d~~~a~~~~~~l~~~~G~v~IN~~~~~~~~~~~PfGG~k~SG~G~--- 500 (533)
T TIGR01236 424 TVYVYPDDKYKEILDVVDSTSRYGLTGAVFAKDRQAILEADKRLRFAAGNFYINDKPTGAVVGQQPFGGARGSGTND--- 500 (533)
T ss_pred EEEEeCCCCHHHHHHHHhcCCCcCceEEEEeCCHHHHHHHHHHhhhcCcEEEECCCCCCCCCCCCCCCCcccccCCc---
Confidence 9999998 59999999 899999999999999999999999977 9999999865433 568999999999852
Q ss_pred ccccccccccceEEEEEEEcC
Q 005074 674 HARGPVGVEGLLTTRWILRGN 694 (715)
Q Consensus 674 ~~~g~~gl~~ft~~K~v~~~~ 694 (715)
+++|++|+++|+++|++....
T Consensus 501 ~~~g~~~l~~f~~~k~v~~~~ 521 (533)
T TIGR01236 501 KAGGPLNLLRWTSARSIKETF 521 (533)
T ss_pred ccCCHHHHHHhcceEEEEEEc
Confidence 356899999999999988754
No 66
>cd07138 ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric acid dehydrogenase-like. The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD.
Probab=100.00 E-value=8.1e-72 Score=627.98 Aligned_cols=391 Identities=20% Similarity=0.198 Sum_probs=330.3
Q ss_pred HHHHHcCCcceeEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHh
Q 005074 267 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 346 (715)
Q Consensus 267 l~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~ 346 (715)
..+|.+|+.++++..++ .+|+++++++|++||+.|+++|.++|.++|++++++|++|+++|++++.+|++++..
T Consensus 18 ~~~P~~~~~~~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ 91 (466)
T cd07138 18 VINPATEEVIGTVPLGT------AADVDRAVAAARRAFPAWSATSVEERAALLERIAEAYEARADELAQAITLEMGAPIT 91 (466)
T ss_pred eECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH
Confidence 35678899999998888 899999999999999999999999999999999999999999999998877654421
Q ss_pred hchhHHHHHHhhcChhHHHHHHHHHHHHhcccccc-cccccccccCCCeEEEEeeeceeEEEEEcCC-Chh-hHHHHHHH
Q 005074 347 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEPI-GQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 423 (715)
Q Consensus 347 ~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ 423 (715)
++.. .++...++.++++++..+.. +.. . ....+++++|+|||++|+|| ||. +++++++|
T Consensus 92 ----~~~~-------~ev~~~~~~~~~~~~~~~~~~~~~------~-~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ 153 (466)
T cd07138 92 ----LARA-------AQVGLGIGHLRAAADALKDFEFEE------R-RGNSLVVREPIGVCGLITPWNWPLNQIVLKVAP 153 (466)
T ss_pred ----HHHH-------HHHHHHHHHHHHHHHhhhhccccc------c-CceEEEEEeecceEEEECCCccHHHHHHHHHHH
Confidence 2211 13444444455444322111 111 0 12346789999999999998 694 67899999
Q ss_pred HHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-cchhhHhhcCCCCccEEEeecCHHHHHHHHhhc
Q 005074 424 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST 501 (715)
Q Consensus 424 ALaaGN~vvlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a 501 (715)
||++||+||+|||+.+|+|+..+++++.+ + +|+|++|+|++ ++++++.|..||+|++|+||||+++|+.|++.+
T Consensus 154 ALaaGN~Vv~Kps~~~p~~~~~l~~~~~~----aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a 229 (466)
T cd07138 154 ALAAGCTVVLKPSEVAPLSAIILAEILDE----AGLPAGVFNLVNGDGPVVGEALSAHPDVDMVSFTGSTRAGKRVAEAA 229 (466)
T ss_pred HHhcCCEEEEECCCcCcHHHHHHHHHHHH----cCCCCCcEEEEeCCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHHH
Confidence 99999999999999999999999999986 8 99999999995 556888889999999999999999999999887
Q ss_pred C---CCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccCchhHHHHHHHHHhcCC------
Q 005074 502 K---IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------ 571 (715)
Q Consensus 502 ~---~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~f~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~------ 571 (715)
. +|+++|||||||+||++|||+|.|++.+++|+|.|+| .|++++|||||+++| |+|+++|+++++++.+
T Consensus 230 a~~~~~v~lElgG~~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~g~p~~~ 308 (466)
T cd07138 230 ADTVKRVALELGGKSANIILDDADLEKAVPRGVAACFANSGQSCNAPTRMLVPRSRY-AEAEEIAAAAAEAYVVGDPRDP 308 (466)
T ss_pred hccCCeEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEeHhHH-HHHHHHHHHHHHhcCCCCCCCC
Confidence 3 8999999999999999999999999999999999976 999999999999999 7999999999876521
Q ss_pred ----------------------------eE-ecCcc-c----ccc-c-c-C-----CCCCCccccccCceEEEEEeCCHH
Q 005074 572 ----------------------------GL-FGGPR-A----SKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVDDVR 609 (715)
Q Consensus 572 ----------------------------~~-~g~~~-~----~~~-~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~d 609 (715)
++ .|+.. . .++ + | | +++++++||+||||++|++|+|+|
T Consensus 309 ~~~~gpli~~~~~~~~~~~v~~a~~~Ga~~l~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~fgPvl~v~~~~~~~ 388 (466)
T cd07138 309 ATTLGPLASAAQFDRVQGYIQKGIEEGARLVAGGPGRPEGLERGYFVKPTVFADVTPDMTIAREEIFGPVLSIIPYDDED 388 (466)
T ss_pred CCcCCccCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCcCCCCceECCEEecCCCCCChHHhCCCCCceEEEeccCCHH
Confidence 12 23321 1 133 3 5 2 357899999999999999999999
Q ss_pred HHHHHHHhcCCCceeEEEecCHHHHHHHHHhcCcceEEEcCCCCCCCCCccCCcccccccccccccccccccccceEEEE
Q 005074 610 AAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRW 689 (715)
Q Consensus 610 eAi~~aN~~~~GL~a~i~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~~~pfG~g~~sG~~~~~~~~~g~~gl~~ft~~K~ 689 (715)
|||+++|+++|||++||||+|.+++.++++++++|+|+||+.. ..+.+||||.+.||+| +++|++|+++||+.|+
T Consensus 389 eai~~~n~~~~gL~a~i~t~d~~~a~~~~~~l~~G~v~iN~~~-~~~~~PfgG~k~SG~G----~~~g~~~~~~~~~~k~ 463 (466)
T cd07138 389 EAIAIANDTPYGLAGYVWSADPERARAVARRLRAGQVHINGAA-FNPGAPFGGYKQSGNG----REWGRYGLEEFLEVKS 463 (466)
T ss_pred HHHHHHhCCCCCceEEEEcCCHHHHHHHHHhcCcceEEECCCC-CCCCCCcCCcccccCC----ccchHHHHHHhcceeE
Confidence 9999999999999999999999999999999999999999853 4567899999999875 3568999999999998
Q ss_pred EE
Q 005074 690 IL 691 (715)
Q Consensus 690 v~ 691 (715)
|+
T Consensus 464 v~ 465 (466)
T cd07138 464 IQ 465 (466)
T ss_pred Ee
Confidence 74
No 67
>cd07083 ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like. ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH.
Probab=100.00 E-value=1.4e-71 Score=629.65 Aligned_cols=399 Identities=17% Similarity=0.196 Sum_probs=333.9
Q ss_pred HHHHH-cCCcceeEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
Q 005074 267 IIKVL-EGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQ 345 (715)
Q Consensus 267 l~~~~-tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~ 345 (715)
..+|. +|+.++++...+ .+|+++++++|++||+.|+++|.++|.++|++++++|++++++|++++..|.+++.
T Consensus 36 ~~~P~~tg~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~ 109 (500)
T cd07083 36 SVSPFAPSEVVGTTAKAD------KAEAEAALEAAWAAFKTWKDWPQEDRARLLLKAADLLRRRRRELIATLTYEVGKNW 109 (500)
T ss_pred eeCCCCCCcEEEEEcCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHhCCCH
Confidence 46677 588999998888 89999999999999999999999999999999999999999999999887765432
Q ss_pred hhchhHHHHHHhhcChhHHHHHHHHHHHHhccccc-ccccccccccCCCeEEEEeeeceeEEEEEcCC-Chh-hHHHHHH
Q 005074 346 EAGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIAS 422 (715)
Q Consensus 346 ~~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~ 422 (715)
.++ ..|+..+++.++++++.... .+....... ..+...+++++|+|||++|+|| ||. +.+++++
T Consensus 110 ----~~a--------~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~ 176 (500)
T cd07083 110 ----VEA--------IDDVAEAIDFIRYYARAALRLRYPAVEVVP-YPGEDNESFYVGLGAGVVISPWNFPVAIFTGMIV 176 (500)
T ss_pred ----HHH--------HHHHHHHHHHHHHHHHHHHHhcCcccccCC-CCCceEEEEEeccceEEEEcCCccHHHHHHHHHH
Confidence 121 22455555555555433211 121110000 1234457789999999999998 685 5679999
Q ss_pred HHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-cchhhHhhcCCCCccEEEeecCHHHHHHHHhh
Q 005074 423 LAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKES 500 (715)
Q Consensus 423 ~ALaaGN~vvlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~ 500 (715)
|||++||+||+|||+.||+|+..+++++.+ + +|+|++|+|++ +.++++.|..||+||+|+||||+.+|+.|++.
T Consensus 177 ~ALaaGN~VVlKPs~~tp~~~~~l~~~~~e----aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~v~~~ 252 (500)
T cd07083 177 APVAVGNTVIAKPAEDAVVVGYKVFEIFHE----AGFPPGVVQFLPGVGEEVGAYLTEHERIRGINFTGSLETGKKIYEA 252 (500)
T ss_pred HHHHcCCeEEEeCCCcchHHHHHHHHHHHH----cCCCCCceEEEeCCCchhHHHHhcCCCcCEEEEECcHHHHHHHHHH
Confidence 999999999999999999999999999986 8 99999999996 56788888899999999999999999999877
Q ss_pred cC---------CCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccCchhHHHHHHHHHhcC
Q 005074 501 TK---------IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEG 570 (715)
Q Consensus 501 a~---------~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~f~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~ 570 (715)
++ +|+++|||||||+||++|||+|.|++.+++++|.|+| .|+|++|+|||+++| |+|+++|+++++++.
T Consensus 253 aa~~~~~~~~~~~v~lElgG~~~~iV~~dadl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~ 331 (500)
T cd07083 253 AARLAPGQTWFKRLYVETGGKNAIIVDETADFELVVEGVVVSAFGFQGQKCSAASRLILTQGAY-EPVLERLLKRAERLS 331 (500)
T ss_pred HhhccccccccCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeeEEEcHHHH-HHHHHHHHHHHHcCC
Confidence 62 8999999999999999999999999999999999987 999999999999999 799999999988763
Q ss_pred Ce----------------------------------EecCccc--cc-cc-c-C-----CCCCCccccccCceEEEEEeC
Q 005074 571 VG----------------------------------LFGGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVD 606 (715)
Q Consensus 571 ~~----------------------------------~~g~~~~--~~-~~-p-v-----~~~~~~~eE~FGPVl~v~~~~ 606 (715)
+. +.|+... .+ ++ | | +++++++||+||||++|++|+
T Consensus 332 ~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~g~vl~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~ 411 (500)
T cd07083 332 VGPPEENGTDLGPVIDAEQEAKVLSYIEHGKNEGQLVLGGKRLEGEGYFVAPTVVEEVPPKARIAQEEIFGPVLSVIRYK 411 (500)
T ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCEEEeCCCcCCCCCeEEccEEEeCCCCCChHhhCCCCCceEEEEEeC
Confidence 21 1122211 12 23 5 2 358899999999999999999
Q ss_pred --CHHHHHHHHHhcCCCceeEEEecCHHHHHHHHHhcCcceEEEcCCCCCC--CCCccCCcccccccccccccccccccc
Q 005074 607 --DVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFC--DGARFGLGAEVGISTSRIHARGPVGVE 682 (715)
Q Consensus 607 --~~deAi~~aN~~~~GL~a~i~t~d~~~~~~~~~~l~~G~V~iN~~~~~~--~~~pfG~g~~sG~~~~~~~~~g~~gl~ 682 (715)
|+||||+++|+++|||++||||+|.+++.++++++++|+|+||+..... +.+||||.|.||+|. +++|++|++
T Consensus 412 d~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~PfGG~k~SG~G~---~~~g~~~l~ 488 (500)
T cd07083 412 DDDFAEALEVANSTPYGLTGGVYSRKREHLEEARREFHVGNLYINRKITGALVGVQPFGGFKLSGTNA---KTGGPHYLR 488 (500)
T ss_pred CCCHHHHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCeeEEEECCCCCCCCCCCCCCCccccccCCC---cccCHHHHH
Confidence 9999999999999999999999999999999999999999999876543 457999999999852 246899999
Q ss_pred cceEEEEEEE
Q 005074 683 GLLTTRWILR 692 (715)
Q Consensus 683 ~ft~~K~v~~ 692 (715)
+||+.|++..
T Consensus 489 ~~~~~k~~~~ 498 (500)
T cd07083 489 RFLEMKAVAE 498 (500)
T ss_pred HhhheeEEEE
Confidence 9999999875
No 68
>cd07123 ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17. Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences.
Probab=100.00 E-value=1.3e-71 Score=631.36 Aligned_cols=400 Identities=18% Similarity=0.190 Sum_probs=331.4
Q ss_pred hHHHHHc-CCcceeEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH-CHHHHHHHHHHHHHH
Q 005074 266 SIIKVLE-GKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEA-NESLIKVENEADVAA 343 (715)
Q Consensus 266 ~l~~~~t-g~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~-~~~~l~~~~~~d~~~ 343 (715)
.+.+|.+ |+.++++..++ .+||++|+++|++||+.|+++|.++|.++|++++++|++ |+++|+.++..|+++
T Consensus 49 ~v~~P~~tg~~l~~~~~~~------~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~~ela~~~~~e~Gk 122 (522)
T cd07123 49 KQVMPHDHAHVLATYHYAD------AALVEKAIEAALEARKEWARMPFEDRAAIFLKAADLLSGKYRYELNAATMLGQGK 122 (522)
T ss_pred EEECCCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhhCHHHHHHHHHHhcCC
Confidence 3567884 99999998888 899999999999999999999999999999999999996 899999988776654
Q ss_pred HHhhchhHHHHHHhhcChhHHHHHHHHHHHHhccccc-ccccccccccCCCeEEEEeeece-eEEEEEcCC-Chh-hHHH
Q 005074 344 AQEAGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPL-GVLLIVFES-RPD-ALVQ 419 (715)
Q Consensus 344 ~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~Pl-GVV~~I~p~-~P~-~~~~ 419 (715)
... ++. ..++...++.++++++..+. .+...+. ...+...+++++|+ |||++|+|| ||. +..+
T Consensus 123 ~~~----~a~-------~~~v~~~~~~~~~~a~~~~~~~~~~~~~--~~~~~~~~~~~~P~~GVv~~I~PwNfP~~~~~~ 189 (522)
T cd07123 123 NVW----QAE-------IDAACELIDFLRFNVKYAEELYAQQPLS--SPAGVWNRLEYRPLEGFVYAVSPFNFTAIGGNL 189 (522)
T ss_pred CHH----HHh-------HHHHHHHHHHHHHHHHHHHHhcCccccC--CCCCceeEEEEecCCceEEEECCcccHHHHHHH
Confidence 321 221 12344555555555543221 1222111 11134567889999 999999998 684 5678
Q ss_pred HHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-cchhhHhhcCCCCccEEEeecCHHHHHHH
Q 005074 420 IASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQI 497 (715)
Q Consensus 420 ~~~~ALaaGN~vvlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i 497 (715)
+++||| +||+||+|||+.||+++..+++++.+ + ||+|+||+|+| ++++++.|..||+|++|+||||+++|+.|
T Consensus 190 ~~~pal-aGN~VVlKPs~~tp~~~~~l~~~l~~----aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~V~FTGS~~~G~~i 264 (522)
T cd07123 190 AGAPAL-MGNVVLWKPSDTAVLSNYLVYKILEE----AGLPPGVINFVPGDGPVVGDTVLASPHLAGLHFTGSTPTFKSL 264 (522)
T ss_pred HHHHHH-hCCEEEEECCCCCCHHHHHHHHHHHH----cCcCCCcEEEEecCchHHHHHHhcCCCcCEEEEECCHHHHHHH
Confidence 999999 69999999999999999999999986 8 99999999996 55688888999999999999999999999
Q ss_pred HhhcC---C------CEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccCchhHHHHHHHHH
Q 005074 498 KESTK---I------PVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQ 567 (715)
Q Consensus 498 ~~~a~---~------~~~lElGGk~p~iV~~dADl~~A~~~iv~~~f~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~ 567 (715)
++.++ + |+++|||||||+||++|||+|.|++.+++|+|.|+| +|+|++|+|||+++| |+|+++|+++++
T Consensus 265 ~~~aa~~l~~~~~~~~v~lElGGkn~~IV~~dAdl~~Aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~ 343 (522)
T cd07123 265 WKQIGENLDRYRTYPRIVGETGGKNFHLVHPSADVDSLVTATVRGAFEYQGQKCSAASRAYVPESLW-PEVKERLLEELK 343 (522)
T ss_pred HHHHHhhcccccccCCEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHH-HHHHHHHHHHHh
Confidence 98773 4 899999999999999999999999999999999987 999999999999999 799999999988
Q ss_pred hcCC-----------------------------------eE-ecCccc--cccc--c-C-----CCCCCccccccCceEE
Q 005074 568 HEGV-----------------------------------GL-FGGPRA--SKLL--Q-I-----PETRLFHHEYNSMVCT 601 (715)
Q Consensus 568 ~~~~-----------------------------------~~-~g~~~~--~~~~--p-v-----~~~~~~~eE~FGPVl~ 601 (715)
++.+ ++ .|+... .++| | | ++|++++||+||||++
T Consensus 344 ~l~~G~p~d~~t~~Gpli~~~~~~~v~~~v~~a~~~~Ga~vl~gg~~~~~~g~f~~PTvl~~v~~~~~i~~eEiFGPVl~ 423 (522)
T cd07123 344 EIKMGDPDDFSNFMGAVIDEKAFDRIKGYIDHAKSDPEAEIIAGGKCDDSVGYFVEPTVIETTDPKHKLMTEEIFGPVLT 423 (522)
T ss_pred hCccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEeCCCcCCCCCceEcCEEEeCCCCCChhhhcCCCCCeEE
Confidence 7621 11 122221 1333 6 3 3689999999999999
Q ss_pred EEEeC--CHHHHHHHHHhcC-CCceeEEEecCHHHHHHHHHhc--CcceEEEcCCCCC--CCCCccCCcccccccccccc
Q 005074 602 VEIVD--DVRAAIDHIHQHG-SAHTDCIVAEDQKVAETFLCQV--DSAAVFHNASTRF--CDGARFGLGAEVGISTSRIH 674 (715)
Q Consensus 602 v~~~~--~~deAi~~aN~~~-~GL~a~i~t~d~~~~~~~~~~l--~~G~V~iN~~~~~--~~~~pfG~g~~sG~~~~~~~ 674 (715)
|++|+ |+||||+++|+++ |||++||||+|.+++.++++++ ++|+|+||+.... .+.+||||.|.||+|+ +
T Consensus 424 V~~~~~~~~~eai~~aN~~~~~gL~a~Vft~d~~~~~~~~~~l~~~~G~v~iN~~~~~~~~~~~PfGG~k~SG~gg---~ 500 (522)
T cd07123 424 VYVYPDSDFEETLELVDTTSPYALTGAIFAQDRKAIREATDALRNAAGNFYINDKPTGAVVGQQPFGGARASGTND---K 500 (522)
T ss_pred EEEeCCCCHHHHHHHHhCCCCcCceEEEEeCCHHHHHHHHHhhhhcCcEEEECCCCCCCCCCCCCCCcchhcCCCc---c
Confidence 99998 4799999999995 9999999999999999999996 5999999987544 2468999999999852 3
Q ss_pred cccccccccceEEEEEEEc
Q 005074 675 ARGPVGVEGLLTTRWILRG 693 (715)
Q Consensus 675 ~~g~~gl~~ft~~K~v~~~ 693 (715)
++|++++++||+.|++...
T Consensus 501 ~~g~~~l~~~~~~k~~~~~ 519 (522)
T cd07123 501 AGSPLNLLRWVSPRTIKET 519 (522)
T ss_pred cCCHHHHHHhcceEEEEEe
Confidence 5689999999999998753
No 69
>PRK09457 astD succinylglutamic semialdehyde dehydrogenase; Reviewed
Probab=100.00 E-value=1.9e-71 Score=626.55 Aligned_cols=397 Identities=17% Similarity=0.131 Sum_probs=329.0
Q ss_pred HHHHHcCCcceeEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHh
Q 005074 267 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 346 (715)
Q Consensus 267 l~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~ 346 (715)
..+|.||+.++++..++ .+++++++++|++||+.|+++|.++|.++|++++++|++|+++|++++.+|.+++..
T Consensus 19 ~~~P~t~~~i~~~~~a~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ 92 (487)
T PRK09457 19 SRNPVSGEVLWQGNDAT------AAQVDAAVRAARAAFPAWARLSFEERQAIVERFAALLEENKEELAEVIARETGKPLW 92 (487)
T ss_pred EECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhCCCHH
Confidence 35688999999998888 899999999999999999999999999999999999999999999998877654421
Q ss_pred hchhHHHHHHhhcChhHHHHHHHHHHHHhccc-ccccccccccccCCCeEEEEeeeceeEEEEEcCC-Chh-hHHHHHHH
Q 005074 347 AGYAKSLVSRLALKPGKISSLAKSIRILADME-EPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 423 (715)
Q Consensus 347 ~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ 423 (715)
++. .|+..+++.+++++... +..+..... ..+...+++|+|+|||++|+|| ||. +..++++|
T Consensus 93 ----~a~--------~ev~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ 157 (487)
T PRK09457 93 ----EAA--------TEVTAMINKIAISIQAYHERTGEKRSE---MADGAAVLRHRPHGVVAVFGPYNFPGHLPNGHIVP 157 (487)
T ss_pred ----HHH--------HHHHHHHHHHHHHHHHHHHhcCceecc---CCCceeEEEEeccEEEEEECCCchHHHHHHHHHHH
Confidence 221 13444444444333211 112222111 1233457889999999999998 685 56789999
Q ss_pred HHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecCcchhhHhhcCCCCccEEEeecCHHHHHHHHhhc-
Q 005074 424 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST- 501 (715)
Q Consensus 424 ALaaGN~vvlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a- 501 (715)
||++||+||+|||+.||+|+..+++++.+ + ||+|++|+|+++.++++.|..||+||+|+||||+++|+.|++++
T Consensus 158 ALaaGN~VvlKPs~~tp~t~~~l~~l~~~----aGlP~gvv~~v~g~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa 233 (487)
T PRK09457 158 ALLAGNTVVFKPSELTPWVAELTVKLWQQ----AGLPAGVLNLVQGGRETGKALAAHPDIDGLLFTGSANTGYLLHRQFA 233 (487)
T ss_pred HHHcCCEEEEECCCCCcHHHHHHHHHHHH----hCcCcCeEEEEeCCHHHHHHHhcCCCcCEEEEECCHHHHHHHHHHHh
Confidence 99999999999999999999999999987 8 99999999997556788888999999999999999999999864
Q ss_pred ---CCCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCccc-CchhHHHHHHHHHhcCCe----
Q 005074 502 ---KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLA-CNGALNELVVELQHEGVG---- 572 (715)
Q Consensus 502 ---~~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~f~n~g-~C~a~~rv~V~~~i~-d~~f~~~l~~~~~~~~~~---- 572 (715)
.++++||||||||+||++|||+|.|++.+++++|.|+| .|+|++|||||+++| | +|+++|+++++++.+.
T Consensus 234 ~~~~~~~~lElGGk~p~IV~~dADl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~d-~f~~~l~~~~~~~~vG~p~~ 312 (487)
T PRK09457 234 GQPEKILALEMGGNNPLVIDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPQGAQGD-AFLARLVAVAKRLTVGRWDA 312 (487)
T ss_pred hcCCCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHhhccCCCCCCCceEEEeccccHH-HHHHHHHHHHhcCcCCCCCc
Confidence 26789999999999999999999999999999999987 999999999999996 6 9999999998775321
Q ss_pred -------------------------------E-ecCccc--c-ccc-c-C----CCCCCccccccCceEEEEEeCCHHHH
Q 005074 573 -------------------------------L-FGGPRA--S-KLL-Q-I----PETRLFHHEYNSMVCTVEIVDDVRAA 611 (715)
Q Consensus 573 -------------------------------~-~g~~~~--~-~~~-p-v----~~~~~~~eE~FGPVl~v~~~~~~deA 611 (715)
+ .|+... . .++ | | +++++++||+||||++|++|+|+|||
T Consensus 313 ~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~PTvl~v~~~~~i~~eE~FGPVl~V~~~~~~dea 392 (487)
T PRK09457 313 EPQPFMGAVISEQAAQGLVAAQAQLLALGGKSLLEMTQLQAGTGLLTPGIIDVTGVAELPDEEYFGPLLQVVRYDDFDEA 392 (487)
T ss_pred CCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCccCCCCeeEecEEeccCCCChHHhCCCcCCeEEEEEeCCHHHH
Confidence 1 121110 1 233 5 2 35889999999999999999999999
Q ss_pred HHHHHhcCCCceeEEEecCHHHHHHHHHhcCcceEEEcCCCCC-CCCCccCCcccccccccccccccccccccceEEEEE
Q 005074 612 IDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRF-CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWI 690 (715)
Q Consensus 612 i~~aN~~~~GL~a~i~t~d~~~~~~~~~~l~~G~V~iN~~~~~-~~~~pfG~g~~sG~~~~~~~~~g~~gl~~ft~~K~v 690 (715)
|+++|+++|||++||||+|.++++++++++++|+|+||++... .+.+||||.|.||+| +++|. ...+||+.|++
T Consensus 393 i~~~N~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G----~~~g~-~~~~~~~~k~~ 467 (487)
T PRK09457 393 IRLANNTRFGLSAGLLSDDREDYDQFLLEIRAGIVNWNKPLTGASSAAPFGGVGASGNH----RPSAY-YAADYCAYPMA 467 (487)
T ss_pred HHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEECCCCCCCCCCCCCCcccccCC----CCCch-hHhhheeeeEE
Confidence 9999999999999999999999999999999999999987544 356899999999986 24464 44669999999
Q ss_pred EEcC
Q 005074 691 LRGN 694 (715)
Q Consensus 691 ~~~~ 694 (715)
++..
T Consensus 468 ~~~~ 471 (487)
T PRK09457 468 SLES 471 (487)
T ss_pred EEec
Confidence 8875
No 70
>PRK03137 1-pyrroline-5-carboxylate dehydrogenase; Provisional
Probab=100.00 E-value=1.3e-71 Score=631.20 Aligned_cols=398 Identities=19% Similarity=0.227 Sum_probs=334.9
Q ss_pred hHHHHH-cCCcceeEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
Q 005074 266 SIIKVL-EGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAA 344 (715)
Q Consensus 266 ~l~~~~-tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~ 344 (715)
...+|. +|+.++++..++ .+|+++++++|++||+.|+++|.++|.++|++++++|++++++|++++++|.+++
T Consensus 53 ~~~~P~~t~~~i~~~~~a~------~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~ 126 (514)
T PRK03137 53 VSINPANKSEVVGRVSKAT------KELAEKAMQAALEAFETWKKWSPEDRARILLRAAAIIRRRKHEFSAWLVKEAGKP 126 (514)
T ss_pred EeECCCCCCceEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHcCCC
Confidence 347888 599999999888 8999999999999999999999999999999999999999999999988776553
Q ss_pred HhhchhHHHHHHhhcChhHHHHHHHHHHHHhccccc-c-cccccccccCCCeEEEEeeeceeEEEEEcCC-Chh-hHHHH
Q 005074 345 QEAGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-I-GQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQI 420 (715)
Q Consensus 345 ~~~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~-g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~ 420 (715)
. .++. .|+...++.++++++..+. . +..... ..+...+++++|+|||++|+|| ||. +++++
T Consensus 127 ~----~~a~--------~ev~~~~~~~~~~a~~~~~~~~~~~~~~---~~g~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 191 (514)
T PRK03137 127 W----AEAD--------ADTAEAIDFLEYYARQMLKLADGKPVES---RPGEHNRYFYIPLGVGVVISPWNFPFAIMAGM 191 (514)
T ss_pred H----HHHH--------HHHHHHHHHHHHHHHHHHHhcCCccccC---CCCceEEEEEecCcEEEEECCCccHHHHHHHH
Confidence 2 1221 2455555555555432211 1 211111 1234567889999999999998 585 56799
Q ss_pred HHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-cchhhHhhcCCCCccEEEeecCHHHHHHHH
Q 005074 421 ASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIK 498 (715)
Q Consensus 421 ~~~ALaaGN~vvlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~ 498 (715)
++|||++||+||+|||+.+|+++..+++++.+ + +|+|++|+|++ +.+++..|..||+|++|+||||+.+|+.|+
T Consensus 192 i~~ALaaGN~VVlKPs~~tp~~a~~l~~~l~~----aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~ 267 (514)
T PRK03137 192 TLAAIVAGNTVLLKPASDTPVIAAKFVEVLEE----AGLPAGVVNFVPGSGSEVGDYLVDHPKTRFITFTGSREVGLRIY 267 (514)
T ss_pred HHHHHHcCCEEEEECCCCCcHHHHHHHHHHHH----hCCCCCcEEEeecCchHHHHHHhcCCCcCEEEEECCcHHHHHHH
Confidence 99999999999999999999999999999986 8 99999999995 566888888999999999999999999998
Q ss_pred hhcC---------CCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccCchhHHHHHHHHHh
Q 005074 499 ESTK---------IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQH 568 (715)
Q Consensus 499 ~~a~---------~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~f~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~ 568 (715)
+.|+ ||+++|||||||+||++|||+|.|++.+++++|.|+| .|+|++|+|||+++| |+|+++|++++++
T Consensus 268 ~~aa~~~~~~~~l~~v~lElgGk~~~iV~~daDl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~v~-d~f~~~l~~~~~~ 346 (514)
T PRK03137 268 ERAAKVQPGQIWLKRVIAEMGGKDAIVVDEDADLDLAAESIVASAFGFSGQKCSACSRAIVHEDVY-DEVLEKVVELTKE 346 (514)
T ss_pred HHHhcccccccccceEEecCCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCCCccCeEEEEeHHHH-HHHHHHHHHHHHh
Confidence 8763 6999999999999999999999999999999999987 999999999999999 7999999999887
Q ss_pred cCCe---------------------------------EecCccc--ccc-c-c-C-----CCCCCccccccCceEEEEEe
Q 005074 569 EGVG---------------------------------LFGGPRA--SKL-L-Q-I-----PETRLFHHEYNSMVCTVEIV 605 (715)
Q Consensus 569 ~~~~---------------------------------~~g~~~~--~~~-~-p-v-----~~~~~~~eE~FGPVl~v~~~ 605 (715)
+.+. +.|+... .++ + | | +++++++||+||||++|++|
T Consensus 347 l~~g~p~~~~~~Gpli~~~~~~~v~~~v~~a~~~~~vl~Gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~ 426 (514)
T PRK03137 347 LTVGNPEDNAYMGPVINQASFDKIMSYIEIGKEEGRLVLGGEGDDSKGYFIQPTIFADVDPKARIMQEEIFGPVVAFIKA 426 (514)
T ss_pred CCCCCCCCccCcCCCCCHHHHHHHHHHHHHHHhCCEEEeCCCcCCCCceEEeeEEEeCCCCCCHHHhCCCCCceEEEEec
Confidence 6321 1133211 132 3 5 2 36889999999999999999
Q ss_pred CCHHHHHHHHHhcCCCceeEEEecCHHHHHHHHHhcCcceEEEcCCCCC--CCCCccCCccccccccccccccccccccc
Q 005074 606 DDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRF--CDGARFGLGAEVGISTSRIHARGPVGVEG 683 (715)
Q Consensus 606 ~~~deAi~~aN~~~~GL~a~i~t~d~~~~~~~~~~l~~G~V~iN~~~~~--~~~~pfG~g~~sG~~~~~~~~~g~~gl~~ 683 (715)
+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+.... .+.+||||.|.||+|. +++|++|+++
T Consensus 427 ~~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~k~SG~G~---~~gg~~~l~~ 503 (514)
T PRK03137 427 KDFDHALEIANNTEYGLTGAVISNNREHLEKARREFHVGNLYFNRGCTGAIVGYHPFGGFNMSGTDS---KAGGPDYLLL 503 (514)
T ss_pred CCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCCcccccCCc---ccCCHHHHHH
Confidence 9999999999999999999999999999999999999999999986543 2457999999999852 2468899999
Q ss_pred ceEEEEEEE
Q 005074 684 LLTTRWILR 692 (715)
Q Consensus 684 ft~~K~v~~ 692 (715)
||+.|+|..
T Consensus 504 ft~~k~v~~ 512 (514)
T PRK03137 504 FLQAKTVSE 512 (514)
T ss_pred hceEEEEEE
Confidence 999999865
No 71
>cd07131 ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like. Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD.
Probab=100.00 E-value=1.1e-71 Score=629.16 Aligned_cols=399 Identities=18% Similarity=0.194 Sum_probs=334.5
Q ss_pred HHHHc-CCcceeEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHh
Q 005074 268 IKVLE-GKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 346 (715)
Q Consensus 268 ~~~~t-g~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~ 346 (715)
.+|.+ ++.++++...+ .+|+++++++|++||+.|+++|.++|.++|++++++|++|+++|++++.+|++++.
T Consensus 19 ~~P~t~~~~~~~~~~~~------~~~v~~av~~a~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~ela~~~~~e~Gk~~- 91 (478)
T cd07131 19 RNPADLEEVVGTFPLST------ASDVDAAVEAAREAFPEWRKVPAPRRAEYLFRAAELLKKRKEELARLVTREMGKPL- 91 (478)
T ss_pred ECCCCCCeEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCH-
Confidence 45777 57789988888 89999999999999999999999999999999999999999999998876655432
Q ss_pred hchhHHHHHHhhcChhHHHHHHHHHHHHhcccc-cccccccccccCCCeEEEEeeeceeEEEEEcCC-Chh-hHHHHHHH
Q 005074 347 AGYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 423 (715)
Q Consensus 347 ~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ 423 (715)
.++ ..++...++.++++++..+ ..+...+.. ..+...+++++|+|||++|+|| +|. +.+++++|
T Consensus 92 ---~~~--------~~ev~~~i~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ 158 (478)
T cd07131 92 ---AEG--------RGDVQEAIDMAQYAAGEGRRLFGETVPSE--LPNKDAMTRRQPIGVVALITPWNFPVAIPSWKIFP 158 (478)
T ss_pred ---HHH--------HHHHHHHHHHHHHHHHHHHHhCCcccccC--CCCceEEEEeeceeEEEEECCcCcHHHHHHHHHHH
Confidence 121 1245555555555543321 122222111 1233567899999999999998 685 56789999
Q ss_pred HHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-cchhhHhhcCCCCccEEEeecCHHHHHHHHhhc
Q 005074 424 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST 501 (715)
Q Consensus 424 ALaaGN~vvlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a 501 (715)
||++||+||+|||+.+|+++..+++++.+ + ||+|++|+|++ +.++++.|..||+||+|+||||+.+|+.|++.+
T Consensus 159 ALaaGN~VvlKps~~~p~~~~~l~~~l~~----aGlP~gvv~~v~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~~~a 234 (478)
T cd07131 159 ALVCGNTVVFKPAEDTPACALKLVELFAE----AGLPPGVVNVVHGRGEEVGEALVEHPDVDVVSFTGSTEVGERIGETC 234 (478)
T ss_pred HHHcCCEEEEECCCcCcHHHHHHHHHHHh----cCcCCCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHH
Confidence 99999999999999999999999999986 8 99999999996 555888888999999999999999999998877
Q ss_pred ---CCCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccCchhHHHHHHHHHhcCC------
Q 005074 502 ---KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------ 571 (715)
Q Consensus 502 ---~~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~f~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~------ 571 (715)
.||+++|||||||+||++|||+|.|++.+++++|.|+| .|+|++|||||+++| |+|+++|+++++++.+
T Consensus 235 a~~~~~~~lelgG~~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-~~f~~~l~~~~~~~~~g~p~~~ 313 (478)
T cd07131 235 ARPNKRVALEMGGKNPIIVMDDADLDLALEGALWSAFGTTGQRCTATSRLIVHESVY-DEFLKRFVERAKRLRVGDGLDE 313 (478)
T ss_pred hhcCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEehhhH-HHHHHHHHHHHHhcCCCCCCCC
Confidence 48999999999999999999999999999999999987 999999999999999 7999999999887632
Q ss_pred ----------------------------eE-ecCccc------ccc-c-c-C-----CCCCCccccccCceEEEEEeCCH
Q 005074 572 ----------------------------GL-FGGPRA------SKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVDDV 608 (715)
Q Consensus 572 ----------------------------~~-~g~~~~------~~~-~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~ 608 (715)
++ .|+... .++ + | | +++++++||+||||++|++|+|+
T Consensus 314 ~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~ 393 (478)
T cd07131 314 ETDMGPLINEAQLEKVLNYNEIGKEEGATLLLGGERLTGGGYEKGYFVEPTVFTDVTPDMRIAQEEIFGPVVALIEVSSL 393 (478)
T ss_pred CCcCCcCCCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCceECCEEEeCCCCCChHhhCCCcCCeEEEEEeCCH
Confidence 11 122211 122 3 5 2 35789999999999999999999
Q ss_pred HHHHHHHHhcCCCceeEEEecCHHHHHHHHHhcCcceEEEcCCCCC-CCCCccCCcccccccccccccccccccccceEE
Q 005074 609 RAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRF-CDGARFGLGAEVGISTSRIHARGPVGVEGLLTT 687 (715)
Q Consensus 609 deAi~~aN~~~~GL~a~i~t~d~~~~~~~~~~l~~G~V~iN~~~~~-~~~~pfG~g~~sG~~~~~~~~~g~~gl~~ft~~ 687 (715)
||||+++|+++|||++||||+|.+++++|++++++|+|+||+++.. .+.+||||.++||+|. +++|.+|+++||+.
T Consensus 394 ~eai~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~pfgG~k~SG~G~---~~~g~~~~~~f~~~ 470 (478)
T cd07131 394 EEAIEIANDTEYGLSSAIYTEDVNKAFRARRDLEAGITYVNAPTIGAEVHLPFGGVKKSGNGH---REAGTTALDAFTEW 470 (478)
T ss_pred HHHHHHHhCCCCcceEEEEcCCHHHHHHHHHhcCccEEEECCCCCCCCCCCCCCCcccccCCC---cCCcHHHHHHhhhe
Confidence 9999999999999999999999999999999999999999997654 4678999999999852 24589999999999
Q ss_pred EEEEEcC
Q 005074 688 RWILRGN 694 (715)
Q Consensus 688 K~v~~~~ 694 (715)
|+|++++
T Consensus 471 k~i~~~~ 477 (478)
T cd07131 471 KAVYVDY 477 (478)
T ss_pred EEEEEeC
Confidence 9998753
No 72
>cd07088 ALDH_LactADH-AldA Escherichia coli lactaldehyde dehydrogenase AldA-like. Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD.
Probab=100.00 E-value=1.1e-71 Score=627.99 Aligned_cols=396 Identities=18% Similarity=0.221 Sum_probs=335.8
Q ss_pred HHHHHcCCcceeEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHh
Q 005074 267 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 346 (715)
Q Consensus 267 l~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~ 346 (715)
+.+|.+|+.++++..++ .+++++++++|++||+.|+++|.++|.++|++++++|++++++|++++.+|.++...
T Consensus 17 ~~~P~t~~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~ 90 (468)
T cd07088 17 VLNPATGEVVATVPAAT------AEDADRAVDAAEAAQKAWERLPAIERAAYLRKLADLIRENADELAKLIVEEQGKTLS 90 (468)
T ss_pred eECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHH
Confidence 45678899999999888 899999999999999999999999999999999999999999999998876654321
Q ss_pred hchhHHHHHHhhcChhHHHHHHHHHHHHhccccc-ccccccccccCCCeEEEEeeeceeEEEEEcCC-Chh-hHHHHHHH
Q 005074 347 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 423 (715)
Q Consensus 347 ~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ 423 (715)
++. .|+..+++.+++++.+.+. .+...+.. ..+...+.+++|+|||++|+|| +|. +.++++++
T Consensus 91 ----~a~--------~ev~~~~~~l~~~~~~a~~~~~~~~~~~--~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ 156 (468)
T cd07088 91 ----LAR--------VEVEFTADYIDYMAEWARRIEGEIIPSD--RPNENIFIFKVPIGVVAGILPWNFPFFLIARKLAP 156 (468)
T ss_pred ----HHH--------HHHHHHHHHHHHHHHHHHHhCCccccCc--cccceeEEEEecceeEEEEccCchHHHHHHHHHHH
Confidence 221 2455555556555443221 23222211 1134567889999999999998 686 56789999
Q ss_pred HHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-cchhhHhhcCCCCccEEEeecCHHHHHHHHhhc
Q 005074 424 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST 501 (715)
Q Consensus 424 ALaaGN~vvlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a 501 (715)
||++||+||+|||+.+|.++..+++++++ + ||+|++|+|++ ++++++.|..||++|+|+||||+.+|+.|++.+
T Consensus 157 AL~aGN~VVlKps~~~p~~~~~l~~~~~~----aglP~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~a 232 (468)
T cd07088 157 ALVTGNTIVIKPSEETPLNALEFAELVDE----AGLPAGVLNIVTGRGSVVGDALVAHPKVGMISLTGSTEAGQKIMEAA 232 (468)
T ss_pred HHHcCCEEEEECCCcchHHHHHHHHHHHH----cCcCccceEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHH
Confidence 99999999999999999999999999986 7 99999999996 455788888999999999999999999998876
Q ss_pred ---CCCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccCchhHHHHHHHHHhcCC------
Q 005074 502 ---KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------ 571 (715)
Q Consensus 502 ---~~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~f~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~------ 571 (715)
.||+++|||||||+||++|||+|.|++.+++|+|.|+| .|+|++|||||+++| |+|+++|+++++++.+
T Consensus 233 a~~~~~~~lelGG~~~~iV~~dadl~~aa~~iv~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~g~p~~~ 311 (468)
T cd07088 233 AENITKVSLELGGKAPAIVMKDADLDLAVKAIVDSRIINCGQVCTCAERVYVHEDIY-DEFMEKLVEKMKAVKVGDPFDA 311 (468)
T ss_pred HhcCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHhcccCcCCcCCeEEEEcHHHH-HHHHHHHHHHHHhcCCCCCCCC
Confidence 38999999999999999999999999999999999987 999999999999999 7999999999887632
Q ss_pred ----------------------------eE-ecCccc---cc-cc-c-C-----CCCCCccccccCceEEEEEeCCHHHH
Q 005074 572 ----------------------------GL-FGGPRA---SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAA 611 (715)
Q Consensus 572 ----------------------------~~-~g~~~~---~~-~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deA 611 (715)
++ .|+... .+ ++ | | +++++++||+||||++|++|+|+|||
T Consensus 312 ~~~~gpli~~~~~~~~~~~i~~a~~~ga~vl~gg~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~ea 391 (468)
T cd07088 312 ATDMGPLVNEAALDKVEEMVERAVEAGATLLTGGKRPEGEKGYFYEPTVLTNVRQDMEIVQEEIFGPVLPVVKFSSLDEA 391 (468)
T ss_pred CCccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCceeEcCEEEecCCCCCchhhCCCcCCeEEEEecCCHHHH
Confidence 11 133221 13 33 5 2 35799999999999999999999999
Q ss_pred HHHHHhcCCCceeEEEecCHHHHHHHHHhcCcceEEEcCCCCCCCCCccCCcccccccccccccccccccccceEEEEEE
Q 005074 612 IDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 691 (715)
Q Consensus 612 i~~aN~~~~GL~a~i~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~~~pfG~g~~sG~~~~~~~~~g~~gl~~ft~~K~v~ 691 (715)
|+++|+++|||++||||+|.+++++|++++++|.|+||++.......||||.|.||+| +++|++|+++||+.|+|+
T Consensus 392 i~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~k~SG~G----~~~g~~~l~~~t~~k~v~ 467 (468)
T cd07088 392 IELANDSEYGLTSYIYTENLNTAMRATNELEFGETYINRENFEAMQGFHAGWKKSGLG----GADGKHGLEEYLQTKVVY 467 (468)
T ss_pred HHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccccCC----cCchHHHHHHHhceeEEe
Confidence 9999999999999999999999999999999999999998766666799999999986 356999999999999985
No 73
>PRK09847 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional
Probab=100.00 E-value=9.9e-72 Score=628.82 Aligned_cols=398 Identities=18% Similarity=0.179 Sum_probs=337.0
Q ss_pred HHHHHcCCcceeEEecCCcccccHhhHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
Q 005074 267 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSR--RLQALQSQDRRKILLDVADALEANESLIKVENEADVAAA 344 (715)
Q Consensus 267 l~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~ 344 (715)
..+|.+|+.++++..++ .+|+++++++|++||+ .|+.+|.++|.++|++++++|++|+++|++++++|++++
T Consensus 39 ~~nP~tg~~i~~v~~~~------~~dv~~av~aA~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~ 112 (494)
T PRK09847 39 TVDPVTQAPLAKIARGK------SVDIDRAVSAARGVFERGDWSLSSPAKRKAVLNKLADLMEAHAEELALLETLDTGKP 112 (494)
T ss_pred eECCCCCCEEEEEeCCC------HHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCC
Confidence 35688999999998888 8999999999999997 599999999999999999999999999999988776544
Q ss_pred HhhchhHHHHHHhhcChhHHHHHHHHHHHHhccccc-ccccccccccCCCeEEEEeeeceeEEEEEcCC-Chh-hHHHHH
Q 005074 345 QEAGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIA 421 (715)
Q Consensus 345 ~~~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~ 421 (715)
. .++. ..|+..+++.++++++..+. .++..+. ..+...+++++|+|||++|+|| ||. ++++++
T Consensus 113 ~----~~~~-------~~ev~~~~~~l~~~a~~~~~~~g~~~~~---~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 178 (494)
T PRK09847 113 I----RHSL-------RDDIPGAARAIRWYAEAIDKVYGEVATT---SSHELAMIVREPVGVIAAIVPWNFPLLLTCWKL 178 (494)
T ss_pred H----HHHH-------HHHHHHHHHHHHHHHHHHHHhcCccccC---CCCceeEEEecceeEEEEECCCccHHHHHHHHH
Confidence 2 1121 12555666666666543322 2332221 1233457889999999999998 685 578999
Q ss_pred HHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-cchhhHhhcCCCCccEEEeecCHHHHHHHHh
Q 005074 422 SLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKE 499 (715)
Q Consensus 422 ~~ALaaGN~vvlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~ 499 (715)
+|||++||+||+|||+.+|.++..+++++.+ + +|+|++|+|++ +.+++..|..||++|+|+||||+.+|+.|++
T Consensus 179 ~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~----aGlP~g~v~~v~g~~~~~~~~L~~~~~vd~v~fTGs~~~g~~v~~ 254 (494)
T PRK09847 179 GPALAAGNSVILKPSEKSPLSAIRLAGLAKE----AGLPDGVLNVVTGFGHEAGQALSRHNDIDAIAFTGSTRTGKQLLK 254 (494)
T ss_pred HHHHHcCCEEEEeCCCCChHHHHHHHHHHHH----cCcCcCcEEEEeCCChhHHHHHhcCCCCCEEEEECCHHHHHHHHH
Confidence 9999999999999999999999999999886 8 99999999995 5667787888999999999999999999988
Q ss_pred hc----CCCEEEecCCcceEEEcCCC-CHHHHHHHHHhhccCCCc-cccccceEEEcCcccCchhHHHHHHHHHhcCC--
Q 005074 500 ST----KIPVLGHADGICHVYVDKSA-NLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV-- 571 (715)
Q Consensus 500 ~a----~~~~~lElGGk~p~iV~~dA-Dl~~A~~~iv~~~f~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~-- 571 (715)
.+ .+|+++|||||||+||++|+ |+|.|++.+++++|.|+| .|+|++|||||+++| |+|+++|+++++++.+
T Consensus 255 ~aa~~~~~~~~lElGGk~~~iV~~daaDl~~Aa~~i~~~~~~~aGQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~g~ 333 (494)
T PRK09847 255 DAGDSNMKRVWLEAGGKSANIVFADCPDLQQAASATAAGIFYNQGQVCIAGTRLLLEESIA-DEFLALLKQQAQNWQPGH 333 (494)
T ss_pred HhhhhCCCeEEEecCCCCeeEEcCCccCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHH-HHHHHHHHHHHHhcCCCC
Confidence 65 38999999999999999997 999999999999999987 999999999999999 7999999999987621
Q ss_pred -------------------------------eE-ecCccc--cccc-c-C-----CCCCCccccccCceEEEEEeCCHHH
Q 005074 572 -------------------------------GL-FGGPRA--SKLL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRA 610 (715)
Q Consensus 572 -------------------------------~~-~g~~~~--~~~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~de 610 (715)
++ .|+... ..++ | | +++++++||+||||++|++|+|+||
T Consensus 334 p~~~~~~~gpli~~~~~~~v~~~v~~a~~~G~i~~gg~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~e 413 (494)
T PRK09847 334 PLDPATTMGTLIDCAHADSVHSFIREGESKGQLLLDGRNAGLAAAIGPTIFVDVDPNASLSREEIFGPVLVVTRFTSEEQ 413 (494)
T ss_pred CCCCCCcCCCCcCHHHHHHHHHHHHHHHHCCeEEECCccCCCCceEeeEEEeCCCCCChHHhCcCcCceEEEEecCCHHH
Confidence 11 132211 1233 4 2 3578999999999999999999999
Q ss_pred HHHHHHhcCCCceeEEEecCHHHHHHHHHhcCcceEEEcCCCCCCCCCccCCcccccccccccccccccccccceEEEEE
Q 005074 611 AIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWI 690 (715)
Q Consensus 611 Ai~~aN~~~~GL~a~i~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~~~pfG~g~~sG~~~~~~~~~g~~gl~~ft~~K~v 690 (715)
||+++|+++|||++||||+|.+++.++++++++|+|+||+.+......||||.|.||+| +++|.+|+++||+.|+|
T Consensus 414 ai~~~n~~~~gLsa~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G----~~~g~~~l~~ft~~k~v 489 (494)
T PRK09847 414 ALQLANDSQYGLGAAVWTRDLSRAHRMSRRLKAGSVFVNNYNDGDMTVPFGGYKQSGNG----RDKSLHALEKFTELKTI 489 (494)
T ss_pred HHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCCcccccC----ccchHHHHHHhhceEEE
Confidence 99999999999999999999999999999999999999997766677899999999985 35699999999999999
Q ss_pred EEc
Q 005074 691 LRG 693 (715)
Q Consensus 691 ~~~ 693 (715)
.+.
T Consensus 490 ~~~ 492 (494)
T PRK09847 490 WIS 492 (494)
T ss_pred EEe
Confidence 764
No 74
>TIGR03250 PhnAcAld_DH putative phosphonoacetaldehyde dehydrogenase. It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme.
Probab=100.00 E-value=1.4e-71 Score=625.36 Aligned_cols=397 Identities=18% Similarity=0.186 Sum_probs=331.7
Q ss_pred HHHHcCCcceeEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhh
Q 005074 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 347 (715)
Q Consensus 268 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~ 347 (715)
.+|.+++.++++..++ .+|+++|+++|++|| +.++..+|.++|++++++|++|+++|++++++|++++..
T Consensus 22 ~~P~t~~~i~~~~~~~------~~~v~~av~~A~~a~---~~~~~~~R~~~l~~~a~~l~~~~~ela~~~~~e~Gk~~~- 91 (472)
T TIGR03250 22 RYPYNGTVVGTVPKAS------VDDVRRAFAIAAAYR---PTLTRYERSAILDRAAALLAARKEEISDLITLESGLSKK- 91 (472)
T ss_pred ECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHH---hhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHH-
Confidence 5678899999998888 899999999999886 578999999999999999999999999998877655431
Q ss_pred chhHHHHHHhhcChhHHHHHHHHHHHHhcccc-ccccccccc--ccCCCeEEEEeeece-eEEEEEcCC-Chh-hHHHHH
Q 005074 348 GYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRT--ELADGLILEKTSCPL-GVLLIVFES-RPD-ALVQIA 421 (715)
Q Consensus 348 g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~g~~~~~~--~~~~~~~~~~~~~Pl-GVV~~I~p~-~P~-~~~~~~ 421 (715)
++ ..|+..+++.+++++.... ..+...+.. ....+...+++|+|+ |||++|+|| ||. ++++++
T Consensus 92 ---~a--------~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~Gvv~~I~P~N~P~~~~~~~~ 160 (472)
T TIGR03250 92 ---DS--------LYEVGRVADVLTFAAAEALRDDGQIFSCDLTPHGKARKVFTQREPLLGVISAITPFNHPMNQVAHKI 160 (472)
T ss_pred ---HH--------HHHHHHHHHHHHHHHHHHHHhcCcccccccCCCCCCceEEEEEcCCCCEEEEEcCCcHHHHHHHHHH
Confidence 22 1255666666666654322 223221100 001234567889998 999999998 585 577999
Q ss_pred HHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-cchhhHhhcCCCCccEEEeecCHHHHHHHHh
Q 005074 422 SLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKE 499 (715)
Q Consensus 422 ~~ALaaGN~vvlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~ 499 (715)
+|||++||+||+|||+.+|+++..+++++.+ + ||+|++|+|++ +.+++..|.+||++++|+||||+.+|+.|++
T Consensus 161 ~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~----aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~ 236 (472)
T TIGR03250 161 APAIATNNRMVVKPSEKTPLSALYLADILYE----AGLPPQMLQVVTGDPREIADELITNPHVDLVTFTGGVAIGKYIAA 236 (472)
T ss_pred HHHHHcCCEEEEECCCcchHHHHHHHHHHHH----cCCCcccEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHH
Confidence 9999999999999999999999999999987 8 99999999995 5667888888999999999999999999998
Q ss_pred hcC-CCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccCchhHHHHHHHHHhcCCe-----
Q 005074 500 STK-IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGVG----- 572 (715)
Q Consensus 500 ~a~-~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~f~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~~----- 572 (715)
.+. +|+++|||||||+||++|||+|.|++.+++++|.|+| .|+|++|+|||+++| |+|+++|+++++++...
T Consensus 237 ~a~~~~~~lElGGk~p~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~G~p~~~ 315 (472)
T TIGR03250 237 RAGYRRQVLELGGNDPLIVMEDADLDRAADLAVKGSYKNSGQRCTAVKRMLVQESVA-DRFTELLVEKTRAWRYGDPMDP 315 (472)
T ss_pred HhcCCceEEecCCCCeEEECCCCCHHHHHHHHHHHHHHhhCCCCCCCcEEEEeHhHH-HHHHHHHHHHHHhcCCCCCCCC
Confidence 774 8999999999999999999999999999999999987 999999999999999 79999999998876321
Q ss_pred -----------------------------E-ecCccccccc-c-C-----CCCCCccccccCceEEEEEeCCHHHHHHHH
Q 005074 573 -----------------------------L-FGGPRASKLL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHI 615 (715)
Q Consensus 573 -----------------------------~-~g~~~~~~~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~a 615 (715)
+ .|+.....++ | | ++|++++||+||||++|++|+|+||||+++
T Consensus 316 ~~~~gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~~g~~~~PTvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~a 395 (472)
T TIGR03250 316 SVDMGTVIDEAAAILFEARVNEAIAQGARLLLGNVRDGALYAPTVLDRVDPSMTLVREETFGPVSPVIRFCDIDDAIRIS 395 (472)
T ss_pred CCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCcCCEEEcCEEEeCCCCCChHHhCCCcCCeEEEEEeCCHHHHHHHH
Confidence 1 1221111123 5 2 368999999999999999999999999999
Q ss_pred HhcCCCceeEEEecCHHHHHHHHHhcCcceEEEcCCCCCC-CCCccCCcccccccccccccccccccccceEEEEEEEc
Q 005074 616 HQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFC-DGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRG 693 (715)
Q Consensus 616 N~~~~GL~a~i~t~d~~~~~~~~~~l~~G~V~iN~~~~~~-~~~pfG~g~~sG~~~~~~~~~g~~gl~~ft~~K~v~~~ 693 (715)
|+++|||++||||+|.+++.++++++++|+||||+.+... +.+||||.|.||+|. +.+|++|+++||+.|+++++
T Consensus 396 N~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~---~~g~~~~l~~ft~~k~i~~~ 471 (472)
T TIGR03250 396 NSTAYGLSSGVCTNRLDYITRFIAELQVGTVNVWEVPGYRLELTPFGGIKDSGLGY---KEGVQEAMKSFTNLKTYSLP 471 (472)
T ss_pred hCCCccceEEEEcCCHHHHHHHHHHCCcceEEEcCCCCCCCCCCCCCccccccCCC---CCChHHHHHHhhceEEEEEe
Confidence 9999999999999999999999999999999999876443 458999999999862 23568999999999999875
No 75
>cd07108 ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like. NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD.
Probab=100.00 E-value=1.2e-71 Score=625.53 Aligned_cols=395 Identities=21% Similarity=0.227 Sum_probs=334.0
Q ss_pred HHHHcCCcceeEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhh
Q 005074 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 347 (715)
Q Consensus 268 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~ 347 (715)
.+|.||+.++++..++ .+|+++++++|++||+.|+++|.++|.++|++++++|++|+++|++++.+|++++..
T Consensus 2 ~~P~t~~~~~~~~~~~------~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~- 74 (457)
T cd07108 2 INPATGQVIGEVPRSR------AADVDRAVAAAKAAFPEWAATPARERGKLLARIADALEARSEELARLLALETGNALR- 74 (457)
T ss_pred cCCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCcH-
Confidence 3578999999998888 899999999999999999999999999999999999999999999999887765420
Q ss_pred chhHHHHHHhhcChhHHHHHHHHHHHHhcccc-cccccccccccCCCeEEEEeeeceeEEEEEcCC-Chh-hHHHHHHHH
Q 005074 348 GYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 424 (715)
Q Consensus 348 g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~A 424 (715)
.++ ..|+..+++.+++++.... ..+...+. ..+...++.++|+|||++|+|| ||. +.++++++|
T Consensus 75 --~~a--------~~ev~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~A 141 (457)
T cd07108 75 --TQA--------RPEAAVLADLFRYFGGLAGELKGETLPF---GPDVLTYTVREPLGVVGAILPWNAPLMLAALKIAPA 141 (457)
T ss_pred --HHH--------HHHHHHHHHHHHHHHHHHHHhCCceecc---CCCeeEEEEeecceEEEEECCCchHHHHHHHHHHHH
Confidence 111 1255566666666654332 12222221 1234567889999999999998 685 567899999
Q ss_pred HHhCCEEEEeCCcchHHHHHHHHHHHHHhcccccCcCceEEecC-cchhhHhhcCCCCccEEEeecCHHHHHHHHhhcC-
Q 005074 425 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDTVGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK- 502 (715)
Q Consensus 425 LaaGN~vvlKps~~tp~t~~~l~~~~~~al~~alP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a~- 502 (715)
|++||+||+|||+.+|.++..+++++.+ ++|+|++|+|++ +.++++.|..||++|+|+||||+.+|+.|++.++
T Consensus 142 LaaGN~VVlKps~~~p~~~~~l~~~~~~----~lP~~~~~~v~g~~~~~~~~L~~~~~vd~v~ftGs~~~g~~v~~~aa~ 217 (457)
T cd07108 142 LVAGNTVVLKAAEDAPLAVLLLAEILAQ----VLPAGVLNVITGYGEECGAALVDHPDVDKVTFTGSTEVGKIIYRAAAD 217 (457)
T ss_pred HHcCCEEEEECCCCCcHHHHHHHHHHHH----hCCcCcEEEEeCCchHHHHHHhcCCCcCEEEEECcHHHHHHHHHHHhc
Confidence 9999999999999999999999999986 499999999995 5567888889999999999999999999998773
Q ss_pred --CCEEEecCCcceEEEcCCCCHHHHHHHHHhhc-cCCCc-cccccceEEEcCcccCchhHHHHHHHHHhcCC-------
Q 005074 503 --IPVLGHADGICHVYVDKSANLDVAKNIVIDAK-IDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------- 571 (715)
Q Consensus 503 --~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~-f~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~------- 571 (715)
+|+++|||||||+||++|||+|.|++.+++++ |.|+| +|+|++|||||+++| |+|+++|+++++++.+
T Consensus 218 ~l~~~~lelgG~~~~iV~~dAdl~~Aa~~iv~~~~f~~~GQ~C~a~~rv~V~~~i~-~~f~~~l~~~~~~~~vg~p~~~~ 296 (457)
T cd07108 218 RLIPVSLELGGKSPMIVFPDADLDDAVDGAIAGMRFTRQGQSCTAGSRLFVHEDIY-DAFLEKLVAKLSKLKIGDPLDEA 296 (457)
T ss_pred cCCeEEEECCCCCeeEECCCCCHHHHHHHHHHhhHhhcCCCCCCCCeEEEEehHHH-HHHHHHHHHHHhhCCCCCCCCCC
Confidence 89999999999999999999999999999995 98876 999999999999999 7999999999876522
Q ss_pred ----------------------------eE-ecCccc------cccc--c-C-----CCCCCccccccCceEEEEEeCCH
Q 005074 572 ----------------------------GL-FGGPRA------SKLL--Q-I-----PETRLFHHEYNSMVCTVEIVDDV 608 (715)
Q Consensus 572 ----------------------------~~-~g~~~~------~~~~--p-v-----~~~~~~~eE~FGPVl~v~~~~~~ 608 (715)
++ +|+... .++| | | +++++++||+||||++|++|+|+
T Consensus 297 ~~~gpli~~~~~~~~~~~i~~a~~~~ga~vl~gG~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~ 376 (457)
T cd07108 297 TDIGAIISEKQFAKVCGYIDLGLSTSGATVLRGGPLPGEGPLADGFFVQPTIFSGVDNEWRLAREEIFGPVLCAIPWKDE 376 (457)
T ss_pred CCcCCCCCHHHHHHHHHHHHHHHhCCCCEEEeCCCcCccCCCCCceEECCEEEecCCCCChhhhcCCCCceEEeecCCCH
Confidence 11 132211 1222 5 2 35889999999999999999999
Q ss_pred HHHHHHHHhcCCCceeEEEecCHHHHHHHHHhcCcceEEEcCCCCCCCCCccCCcccccccccccccccccc-cccceEE
Q 005074 609 RAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVG-VEGLLTT 687 (715)
Q Consensus 609 deAi~~aN~~~~GL~a~i~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~~~pfG~g~~sG~~~~~~~~~g~~g-l~~ft~~ 687 (715)
||||+++|+++|||++||||+|.+++++|++++++|+|+||++....+..||||.|.||+|. ++|.++ +++||+.
T Consensus 377 ~eai~~~n~~~~gLs~~vft~d~~~a~~~~~~l~~g~v~iN~~~~~~~~~pfGG~k~SG~G~----~~g~~~~~~~f~~~ 452 (457)
T cd07108 377 DEVIAMANDSHYGLAAYVWTRDLGRALRAAHALEAGWVQVNQGGGQQPGQSYGGFKQSGLGR----EASLEGMLEHFTQK 452 (457)
T ss_pred HHHHHHHhCCCcCceeEEEcCCHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCcccCcCCC----CccchhHHHHhhce
Confidence 99999999999999999999999999999999999999999987666778999999999862 457766 7999999
Q ss_pred EEEE
Q 005074 688 RWIL 691 (715)
Q Consensus 688 K~v~ 691 (715)
|+++
T Consensus 453 k~i~ 456 (457)
T cd07108 453 KTVN 456 (457)
T ss_pred EEEe
Confidence 9985
No 76
>cd07102 ALDH_EDX86601 Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD.
Probab=100.00 E-value=1.7e-71 Score=624.03 Aligned_cols=395 Identities=18% Similarity=0.185 Sum_probs=333.1
Q ss_pred HHHcCCcceeEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhhc
Q 005074 269 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAG 348 (715)
Q Consensus 269 ~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~g 348 (715)
+|.+|+.++++...+ .+|+++++++|++||+.|+++|.++|.++|++++++|++++++|++++..|.+++..
T Consensus 2 ~P~t~~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~-- 73 (452)
T cd07102 2 SPIDGSVIAERPLAS------LEAVRAALERARAAQKGWRAVPLEERKAIVTRAVELLAANTDEIAEELTWQMGRPIA-- 73 (452)
T ss_pred CCCCCCEEEEEcCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHhCCCHH--
Confidence 478899999988888 889999999999999999999999999999999999999999999988876654421
Q ss_pred hhHHHHHHhhcChhHHHHHHHHHHHHhcccccccccccccccCCCeEEEEeeeceeEEEEEcCC-Chh-hHHHHHHHHHH
Q 005074 349 YAKSLVSRLALKPGKISSLAKSIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIR 426 (715)
Q Consensus 349 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALa 426 (715)
++. .++......++++++.++.+. +..... ...+...+++++|+|||++|+|| +|. +.+++++|||+
T Consensus 74 --~~~-~ev~~~~~~~~~~~~~~~~~~------~~~~~~--~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~l~~ALa 142 (452)
T cd07102 74 --QAG-GEIRGMLERARYMISIAEEAL------ADIRVP--EKDGFERYIRREPLGVVLIIAPWNYPYLTAVNAVIPALL 142 (452)
T ss_pred --HHH-HHHHHHHHHHHHHHHHHHHhc------CCcccC--CCCCeeEEEEEEeccEEEEEcCCchHHHHHHHHHHHHHH
Confidence 221 223333334445544444332 111110 11244567889999999999998 685 56789999999
Q ss_pred hCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecCcchhhHhhcCCCCccEEEeecCHHHHHHHHhhcC---
Q 005074 427 SGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK--- 502 (715)
Q Consensus 427 aGN~vvlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a~--- 502 (715)
+||+||+|||+.+|+++..+.+++++ + +|+|++|+|++..+.+..|..||+||+|+||||+.+|+.|+++++
T Consensus 143 aGN~VVlKps~~~~~~~~~l~~~l~~----aGlP~g~~~~v~g~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~a~~~~ 218 (452)
T cd07102 143 AGNAVILKHSPQTPLCGERFAAAFAE----AGLPEGVFQVLHLSHETSAALIADPRIDHVSFTGSVAGGRAIQRAAAGRF 218 (452)
T ss_pred cCCEEEEECCCCCcHHHHHHHHHHHh----cCCCcCcEEEEeCCchhHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcC
Confidence 99999999999999999999999986 8 999999999964467777888999999999999999999988763
Q ss_pred CCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccCchhHHHHHHHHHhcCC----------
Q 005074 503 IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV---------- 571 (715)
Q Consensus 503 ~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~f~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~---------- 571 (715)
+|+++|||||||+||++|||+|.|++.+++|+|.|+| .|++++|+|||+++| |+|+++|+++++++.+
T Consensus 219 ~~v~lelgG~~~~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~-~~f~~~L~~~~~~l~vg~p~~~~~~~ 297 (452)
T cd07102 219 IKVGLELGGKDPAYVRPDADLDAAAESLVDGAFFNSGQSCCSIERIYVHESIY-DAFVEAFVAVVKGYKLGDPLDPSTTL 297 (452)
T ss_pred CcEEEECCCCCceEEcCCCCHHHHHHHHHHHHHHhCCCCCcCCcEEEEeHHHH-HHHHHHHHHHHHhccCCCCCCCCCCC
Confidence 8999999999999999999999999999999999987 999999999999999 7999999999876532
Q ss_pred ------------------------eE-ecCcc-----ccc-cc-c-C-----CCCCCccccccCceEEEEEeCCHHHHHH
Q 005074 572 ------------------------GL-FGGPR-----ASK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAID 613 (715)
Q Consensus 572 ------------------------~~-~g~~~-----~~~-~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi~ 613 (715)
++ .|+.+ ..+ ++ | | ++|++++||+||||++|++|+|+||||+
T Consensus 298 gpli~~~~~~~i~~~i~~a~~~ga~vl~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~ 377 (452)
T cd07102 298 GPVVSARAADFVRAQIADAIAKGARALIDGALFPEDKAGGAYLAPTVLTNVDHSMRVMREETFGPVVGIMKVKSDAEAIA 377 (452)
T ss_pred CCCcCHHHHHHHHHHHHHHHhCCCEEEeCCCCCCCCCCCCceEcCEEEecCCCCChhhhcCCcCCeEEEEEeCCHHHHHH
Confidence 11 23322 112 23 5 2 3578999999999999999999999999
Q ss_pred HHHhcCCCceeEEEecCHHHHHHHHHhcCcceEEEcCCCCCCCCCccCCcccccccccccccccccccccceEEEEEE
Q 005074 614 HIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 691 (715)
Q Consensus 614 ~aN~~~~GL~a~i~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~~~pfG~g~~sG~~~~~~~~~g~~gl~~ft~~K~v~ 691 (715)
++|+++|||++||||+|.+++.++++++++|+|+||++....+..||||.|+||+| +++|++|+++||+.|+++
T Consensus 378 ~~n~~~~gL~~~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfgG~k~SG~G----~~~g~~~~~~~~~~k~~~ 451 (452)
T cd07102 378 LMNDSEYGLTASVWTKDIARAEALGEQLETGTVFMNRCDYLDPALAWTGVKDSGRG----VTLSRLGYDQLTRPKSYH 451 (452)
T ss_pred HHhCCCCCceEEEEcCCHHHHHHHHHHcCcceEEECCCCCCCCCCCCCCccccccC----ccchHHHHHHHhceeEEe
Confidence 99999999999999999999999999999999999998766677899999999986 356999999999999985
No 77
>PRK09407 gabD2 succinic semialdehyde dehydrogenase; Reviewed
Probab=100.00 E-value=2.4e-71 Score=629.91 Aligned_cols=398 Identities=17% Similarity=0.166 Sum_probs=330.8
Q ss_pred HHHcCCcceeEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhhc
Q 005074 269 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAG 348 (715)
Q Consensus 269 ~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~g 348 (715)
+|++|+.++++..++ .+|+++++++|++||+.|+++|.++|.++|++++++|++|+++|++++.+|++++..
T Consensus 38 nP~tg~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~e~Gk~~~-- 109 (524)
T PRK09407 38 APFTGEPLATVPVST------AADVEAAFARARAAQRAWAATPVRERAAVLLRFHDLVLENREELLDLVQLETGKARR-- 109 (524)
T ss_pred CCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH--
Confidence 367899999999888 899999999999999999999999999999999999999999999999888765532
Q ss_pred hhHHHHHHhhcChhHHHHHHHHHHHHhcccccccccccccccCCCeEEEEeeeceeEEEEEcCC-Chh-hHHHHHHHHHH
Q 005074 349 YAKSLVSRLALKPGKISSLAKSIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIR 426 (715)
Q Consensus 349 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALa 426 (715)
++. .++......++++++.++.+.+.....+. .......+++++|+|||++|+|| +|. +.+++++|||+
T Consensus 110 --~a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~------~~~~~~~~~~~~P~GVV~~I~P~N~Pl~~~~~~~~~ALa 180 (524)
T PRK09407 110 --HAF-EEVLDVALTARYYARRAPKLLAPRRRAGA------LPVLTKTTELRQPKGVVGVISPWNYPLTLAVSDAIPALL 180 (524)
T ss_pred --HHH-HHHHHHHHHHHHHHHHHHHhhCCcccccc------CCCCceEEEEEecceEEEEEeCCCChHHHHHHHHHHHHH
Confidence 221 12222222333444433333211110010 01123567889999999999998 684 67899999999
Q ss_pred hCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-cchhhHhhcCCCCccEEEeecCHHHHHHHHhhcC--
Q 005074 427 SGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK-- 502 (715)
Q Consensus 427 aGN~vvlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a~-- 502 (715)
+||+||+|||+.+|.++..+++++.+ + +|+|++|+|++ +.++++.|..| +|+|+||||+.+|+.|+++++
T Consensus 181 aGN~VIlKPs~~tp~~~~~l~~ll~e----aGlP~gvv~~v~g~~~~~~~~L~~~--~d~V~fTGs~~~g~~v~~~aa~~ 254 (524)
T PRK09407 181 AGNAVVLKPDSQTPLTALAAVELLYE----AGLPRDLWQVVTGPGPVVGTALVDN--ADYLMFTGSTATGRVLAEQAGRR 254 (524)
T ss_pred cCCEEEEECCCCCHHHHHHHHHHHHH----cCCCcccEEEEecCCchHHHHHHhc--CCEEEEECCHHHHHHHHHHHHhc
Confidence 99999999999999999999999986 8 99999999995 55677777765 899999999999999998774
Q ss_pred -CCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccCchhHHHHHHHHHhcCC---------
Q 005074 503 -IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV--------- 571 (715)
Q Consensus 503 -~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~f~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~--------- 571 (715)
+|+++|||||||+||++||||+.|++.+++|+|.|+| .|+|++|+|||+++| |+|+++|+++++++.+
T Consensus 255 ~~~v~lElGGknp~iV~~dADl~~Aa~~i~~~~f~~sGQ~C~a~~rv~V~~~v~-d~f~~~L~~~~~~l~~G~~~~~~~~ 333 (524)
T PRK09407 255 LIGFSLELGGKNPMIVLDDADLDKAAAGAVRACFSNAGQLCISIERIYVHESIY-DEFVRAFVAAVRAMRLGAGYDYSAD 333 (524)
T ss_pred CCcEEEECCCCceeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHH-HHHHHHHHHHHHhcCCCCCCCcCCc
Confidence 8999999999999999999999999999999999976 999999999999999 7999999999887632
Q ss_pred -------------------------eE-ecCccc---cc-cc-c-C-----CCCCCccccccCceEEEEEeCCHHHHHHH
Q 005074 572 -------------------------GL-FGGPRA---SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDH 614 (715)
Q Consensus 572 -------------------------~~-~g~~~~---~~-~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~ 614 (715)
++ .|+... .+ ++ | | +++++++||+||||++|++|+|+||||++
T Consensus 334 ~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~deai~~ 413 (524)
T PRK09407 334 MGSLISEAQLETVSAHVDDAVAKGATVLAGGKARPDLGPLFYEPTVLTGVTPDMELAREETFGPVVSVYPVADVDEAVER 413 (524)
T ss_pred cCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCceEeCEEEeCCCCCChHHhCCCCCCeEEEEeeCCHHHHHHH
Confidence 12 233211 12 33 5 3 35799999999999999999999999999
Q ss_pred HHhcCCCceeEEEecCHHHHHHHHHhcCcceEEEcCCCC---CCCCCccCCcccccccccccccccccccccceEEEEEE
Q 005074 615 IHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTR---FCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 691 (715)
Q Consensus 615 aN~~~~GL~a~i~t~d~~~~~~~~~~l~~G~V~iN~~~~---~~~~~pfG~g~~sG~~~~~~~~~g~~gl~~ft~~K~v~ 691 (715)
+|+++|||++||||+|.+++.+|++++++|.|+||++.. .....||||.|.||+| +++|++|+++||+.|+|+
T Consensus 414 ~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~v~IN~~~~~~~~~~~~PfGG~k~SG~G----~~~g~~~l~~ft~~k~v~ 489 (524)
T PRK09407 414 ANDTPYGLNASVWTGDTARGRAIAARIRAGTVNVNEGYAAAWGSVDAPMGGMKDSGLG----RRHGAEGLLKYTESQTIA 489 (524)
T ss_pred HhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCcCcCCCCCCCCCccccccC----ccchHHHHHHhCCeEEEE
Confidence 999999999999999999999999999999999998654 2345799999999986 346999999999999998
Q ss_pred EcC
Q 005074 692 RGN 694 (715)
Q Consensus 692 ~~~ 694 (715)
++.
T Consensus 490 ~~~ 492 (524)
T PRK09407 490 TQR 492 (524)
T ss_pred Ecc
Confidence 864
No 78
>TIGR03240 arg_catab_astD succinylglutamic semialdehyde dehydrogenase. Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism.
Probab=100.00 E-value=4e-71 Score=623.93 Aligned_cols=397 Identities=16% Similarity=0.117 Sum_probs=329.8
Q ss_pred HHHHHcCCcceeEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHh
Q 005074 267 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 346 (715)
Q Consensus 267 l~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~ 346 (715)
..+|.||+.++++..++ .+|+++++++|++||+.|+++|.++|.++|++++++|++|+++|++++.+|.+++..
T Consensus 17 ~~~P~t~~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ 90 (484)
T TIGR03240 17 STNPATQEVLWQGAAAS------AAQVEAAVAAARAAFPAWARLSLEERIAVVQRFAALLEERKEALARVIARETGKPLW 90 (484)
T ss_pred eECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH
Confidence 35688999999998888 899999999999999999999999999999999999999999999998876654421
Q ss_pred hchhHHHHHHhhcChhHHHHHHHHHHHHhccc-ccccccccccccCCCeEEEEeeeceeEEEEEcCC-Chh-hHHHHHHH
Q 005074 347 AGYAKSLVSRLALKPGKISSLAKSIRILADME-EPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 423 (715)
Q Consensus 347 ~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ 423 (715)
++ ..|+..+++.+++++... +..|..... . .+...+++++|+|||++|+|| ||. +.++++++
T Consensus 91 ----~a--------~~ev~~~~~~~~~~~~~~~~~~g~~~~~--~-~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~i~~ 155 (484)
T TIGR03240 91 ----ET--------RTEVASMIGKVAISIKAYHERTGESENP--M-PDGRAVLRHRPHGVVAVFGPYNFPGHLPNGHIVP 155 (484)
T ss_pred ----HH--------HHHHHHHHHHHHHHHHHHHHhcCccccC--C-CCceeEEEEecccEEEEECCCchHHHHHHHHHHH
Confidence 21 124555555555433221 112322111 1 123457889999999999998 685 56789999
Q ss_pred HHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecCcchhhHhhcCCCCccEEEeecCHHHHHHHHhhc-
Q 005074 424 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST- 501 (715)
Q Consensus 424 ALaaGN~vvlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a- 501 (715)
||++||+||+|||+.||+++..+++++++ + +|+|+||+|+++.++++.|..||+||+|+||||+++||.|++.+
T Consensus 156 ALaaGN~VVlKPs~~tp~t~~~l~~~~~~----aGlP~gvv~~v~g~~~~~~~L~~~~~vd~V~fTGS~~~G~~i~~~aa 231 (484)
T TIGR03240 156 ALLAGNTVVFKPSELTPWVAEETVKLWEK----AGLPAGVLNLVQGARETGVALAAHPDIDGLLFTGSSNTGHLLHRQFA 231 (484)
T ss_pred HHHcCCEEEEECCccccHHHHHHHHHHHH----hCcCcccEEEEeCCHHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhh
Confidence 99999999999999999999999999986 7 99999999997556788888999999999999999999998875
Q ss_pred ---CCCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcc-cCchhHHHHHHHHHhcCCe----
Q 005074 502 ---KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDL-ACNGALNELVVELQHEGVG---- 572 (715)
Q Consensus 502 ---~~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~f~n~g-~C~a~~rv~V~~~i-~d~~f~~~l~~~~~~~~~~---- 572 (715)
.+|++||||||||+||++|||+|.|++.+++++|.|+| .|+|++|||||+++ | |+|+++|+++++++.+.
T Consensus 232 ~~~~~~~~lElGGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~~~~-d~f~~~l~~~~~~~~~g~~~~ 310 (484)
T TIGR03240 232 GRPEKILALEMGGNNPLIVDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPDGAQG-DAFLARLVEVAERLTVGAWDA 310 (484)
T ss_pred hcCCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeccccH-HHHHHHHHHHHHhcccCCCCc
Confidence 26799999999999999999999999999999999987 99999999999998 6 59999999988765221
Q ss_pred -------------------------------E-ecCcc--ccc-cc-c-C----CCCCCccccccCceEEEEEeCCHHHH
Q 005074 573 -------------------------------L-FGGPR--ASK-LL-Q-I----PETRLFHHEYNSMVCTVEIVDDVRAA 611 (715)
Q Consensus 573 -------------------------------~-~g~~~--~~~-~~-p-v----~~~~~~~eE~FGPVl~v~~~~~~deA 611 (715)
+ .|+.. ..+ ++ | | +++++++||+||||++|++|+|+|||
T Consensus 311 ~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~i~PTvl~v~~~~~i~~eE~FGPVl~v~~~~~~~ea 390 (484)
T TIGR03240 311 EPQPFMGAVISLQAAQRLLAAQAKLLALGGKSLLAMRQLDPGAALLTPGIIDVTGVAELPDEEHFGPLLQVIRYDDFDEA 390 (484)
T ss_pred CCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCEEEcCEEEccCCCCHHHhCCCcCCeEEEEEeCCHHHH
Confidence 1 11111 112 33 5 3 35789999999999999999999999
Q ss_pred HHHHHhcCCCceeEEEecCHHHHHHHHHhcCcceEEEcCCCCC-CCCCccCCcccccccccccccccccccccceEEEEE
Q 005074 612 IDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRF-CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWI 690 (715)
Q Consensus 612 i~~aN~~~~GL~a~i~t~d~~~~~~~~~~l~~G~V~iN~~~~~-~~~~pfG~g~~sG~~~~~~~~~g~~gl~~ft~~K~v 690 (715)
|+++|+++|||++||||+|.++++++++++++|+|+||++... .+.+||||.+.||+| +++|.++++ |++.|++
T Consensus 391 i~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~~pfGG~~~SG~g----~~~g~~~~~-~~~~~~~ 465 (484)
T TIGR03240 391 IAIANNTRFGLSAGLLSDDRELYDRFLLEIRAGIVNWNKPLTGASSAAPFGGIGASGNH----RPSAYYAAD-YCAYPVA 465 (484)
T ss_pred HHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEECCCCCCCCCCCcCCcccccCC----CCCchHHHh-heeeeEE
Confidence 9999999999999999999999999999999999999987543 356899999999986 345655544 9999999
Q ss_pred EEcC
Q 005074 691 LRGN 694 (715)
Q Consensus 691 ~~~~ 694 (715)
++..
T Consensus 466 ~~~~ 469 (484)
T TIGR03240 466 SLEA 469 (484)
T ss_pred EEec
Confidence 9875
No 79
>cd07100 ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like. Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate.
Probab=100.00 E-value=2.5e-71 Score=617.32 Aligned_cols=374 Identities=17% Similarity=0.206 Sum_probs=316.1
Q ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhhchhHHHHHHhhcChhHHHHHHHHHH
Q 005074 293 AREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIR 372 (715)
Q Consensus 293 v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~ 372 (715)
|++++++|++||+.|+.+|.++|.++|++++++|++++++|++++++|.+++.. ++. .|+..+++.++
T Consensus 1 v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~----~a~--------~ev~~~~~~~~ 68 (429)
T cd07100 1 IEAALDRAHAAFLAWRKTSFAERAALLRKLADLLRERKDELARLITLEMGKPIA----EAR--------AEVEKCAWICR 68 (429)
T ss_pred CHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHH----HHH--------HHHHHHHHHHH
Confidence 478999999999999999999999999999999999999999999877655432 221 24555555555
Q ss_pred HHhccccc-cc-ccccccccCCCeEEEEeeeceeEEEEEcCC-Chh-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHH
Q 005074 373 ILADMEEP-IG-QILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHK 448 (715)
Q Consensus 373 ~~~~~~~~-~g-~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGN~vvlKps~~tp~t~~~l~~ 448 (715)
+++...+. .+ ...+. .+...+++++|+|||++|+|| +|. +.+++++|||++||+||+|||+.+|+++..+++
T Consensus 69 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~P~GvV~~I~P~N~Pl~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~ 144 (429)
T cd07100 69 YYAENAEAFLADEPIET----DAGKAYVRYEPLGVVLGIMPWNFPFWQVFRFAAPNLMAGNTVLLKHASNVPGCALAIEE 144 (429)
T ss_pred HHHHHHHHhcCCeeccC----CCceEEEEEEeeeEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHH
Confidence 55433221 11 11111 123457889999999999998 585 567899999999999999999999999999999
Q ss_pred HHHHhcccc-cCcCceEEecCcchhhHhhcCCCCccEEEeecCHHHHHHHHhhcC---CCEEEecCCcceEEEcCCCCHH
Q 005074 449 VITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK---IPVLGHADGICHVYVDKSANLD 524 (715)
Q Consensus 449 ~~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a~---~~~~lElGGk~p~iV~~dADl~ 524 (715)
++.+ + ||+|++|+|++..+.+..|..||+|++|+||||+.+|+.|+++++ ||+++|||||||+||++|||+|
T Consensus 145 ~l~~----aglP~gvv~~v~g~~~~~~~l~~~~~i~~v~fTGs~~~g~~i~~~aa~~~~~~~lelgG~~p~iV~~daDl~ 220 (429)
T cd07100 145 LFRE----AGFPEGVFQNLLIDSDQVEAIIADPRVRGVTLTGSERAGRAVAAEAGKNLKKSVLELGGSDPFIVLDDADLD 220 (429)
T ss_pred HHHH----cCCCcCcEEEEeCCchhHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCcceEEecCCCCeeEECCCCCHH
Confidence 9986 7 999999999963345566778999999999999999999998873 8999999999999999999999
Q ss_pred HHHHHHHhhccCCCc-cccccceEEEcCcccCchhHHHHHHHHHhcCC--------------------------------
Q 005074 525 VAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV-------------------------------- 571 (715)
Q Consensus 525 ~A~~~iv~~~f~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~-------------------------------- 571 (715)
.|++.+++|+|.|+| .|+|++|||||+++| |+|+++|+++++++.+
T Consensus 221 ~aa~~i~~~~~~~~GQ~C~a~~rv~v~~~i~-~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ 299 (429)
T cd07100 221 KAVKTAVKGRLQNAGQSCIAAKRFIVHEDVY-DEFLEKFVEAMAALKVGDPMDEDTDLGPLARKDLRDELHEQVEEAVAA 299 (429)
T ss_pred HHHHHHHHHHHhccCCCCCCCeEEEEcHHHH-HHHHHHHHHHHHhccCCCCccCCCCccCCCCHHHHHHHHHHHHHHHHC
Confidence 999999999999987 999999999999999 7999999999887632
Q ss_pred --eE-ecCccc--cc-cc-c-C-----CCCCCccccccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEecCHHHHHHHH
Q 005074 572 --GL-FGGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFL 638 (715)
Q Consensus 572 --~~-~g~~~~--~~-~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~i~t~d~~~~~~~~ 638 (715)
++ .|+... .+ ++ | | +++++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++++
T Consensus 300 Ga~~~~gg~~~~~~g~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~ 379 (429)
T cd07100 300 GATLLLGGKRPDGPGAFYPPTVLTDVTPGMPAYDEELFGPVAAVIKVKDEEEAIALANDSPFGLGGSVFTTDLERAERVA 379 (429)
T ss_pred CCEEEeCCCcCCCCCeEEcCEEeecCCCCCHHHhCCCCCCeEEEeeeCCHHHHHHHHhCCCcCceEEEECCCHHHHHHHH
Confidence 12 233221 12 33 5 2 36889999999999999999999999999999999999999999999999999
Q ss_pred HhcCcceEEEcCCCCCCCCCccCCcccccccccccccccccccccceEEEEEE
Q 005074 639 CQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 691 (715)
Q Consensus 639 ~~l~~G~V~iN~~~~~~~~~pfG~g~~sG~~~~~~~~~g~~gl~~ft~~K~v~ 691 (715)
+++++|.|+||++....+.+||||.|.||+| +++|++|+++||+.|+|+
T Consensus 380 ~~l~~g~v~iN~~~~~~~~~pfGG~~~SG~G----~~~g~~~l~~~~~~k~v~ 428 (429)
T cd07100 380 RRLEAGMVFINGMVKSDPRLPFGGVKRSGYG----RELGRFGIREFVNIKTVW 428 (429)
T ss_pred HhCCcCeEEECCCCCCCCCCCcCCccccccC----CcchHHHHHHhcceeEEe
Confidence 9999999999998776677899999999985 356999999999999985
No 80
>cd07139 ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like. The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD.
Probab=100.00 E-value=1.7e-71 Score=626.47 Aligned_cols=395 Identities=20% Similarity=0.192 Sum_probs=333.8
Q ss_pred HHHHHcCCcceeEEecCCcccccHhhHHHHHHHHHHHHHH--HhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
Q 005074 267 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRR--LQALQSQDRRKILLDVADALEANESLIKVENEADVAAA 344 (715)
Q Consensus 267 l~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~--w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~ 344 (715)
..+|.+|+.++.+...+ .+|+++|+++|++||+. |+++|.++|.++|++++++|++|+++|++++..|++++
T Consensus 18 ~~~P~tg~~i~~~~~~~------~~~v~~av~~a~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~ 91 (471)
T cd07139 18 VVSPATEEVVGRVPEAT------PADVDAAVAAARRAFDNGPWPRLSPAERAAVLRRLADALEARADELARLWTAENGMP 91 (471)
T ss_pred eECCCCCCEeEEEeCCC------HHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCC
Confidence 35688999999998888 89999999999999985 99999999999999999999999999999887665543
Q ss_pred HhhchhHHHHHHhhcChhHHHHHHHHHHHHhccccc-cc-ccccccccCCCeEEEEeeeceeEEEEEcCC-Chh-hHHHH
Q 005074 345 QEAGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IG-QILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQI 420 (715)
Q Consensus 345 ~~~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~g-~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~ 420 (715)
.. ++. ..++..+++.+++++...+. .+ ...+. ..+...+++|+|+|||++|+|| ||. +.+++
T Consensus 92 ~~----~~~-------~~ev~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~ 157 (471)
T cd07139 92 IS----WSR-------RAQGPGPAALLRYYAALARDFPFEERRPG---SGGGHVLVRREPVGVVAAIVPWNAPLFLAALK 157 (471)
T ss_pred HH----HHH-------HHHHHHHHHHHHHHHHHHHHhcCCccccC---CCCceEEEEEEeccEEEEEcCCchHHHHHHHH
Confidence 21 111 12455666666666543321 11 11111 1234567889999999999998 585 56899
Q ss_pred HHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecCcchhhHhhcCCCCccEEEeecCHHHHHHHHh
Q 005074 421 ASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKE 499 (715)
Q Consensus 421 ~~~ALaaGN~vvlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~ 499 (715)
+++||++||+||+|||+.+|+++..+.+++.+ + ||+|++|+|+++.+.+..|..||++++|+||||+.+|+.|++
T Consensus 158 i~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~----aglP~gv~~~v~g~~~~~~~l~~~~~i~~v~ftGs~~~g~~v~~ 233 (471)
T cd07139 158 IAPALAAGCTVVLKPSPETPLDAYLLAEAAEE----AGLPPGVVNVVPADREVGEYLVRHPGVDKVSFTGSTAAGRRIAA 233 (471)
T ss_pred HHHHHhcCCEEEEECCCcCCHHHHHHHHHHHH----cCCCCCcEEEEeCCHHHHHHHhcCCCCCEEEEECcHHHHHHHHH
Confidence 99999999999999999999999999999886 8 999999999975557888888999999999999999999988
Q ss_pred hcC---CCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccCchhHHHHHHHHHhcCC----
Q 005074 500 STK---IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV---- 571 (715)
Q Consensus 500 ~a~---~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~f~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~---- 571 (715)
.++ ||+++|||||||+||++|||+|.|++.+++|+|.|+| .|+|++|||||++|| |+|+++|+++++++.+
T Consensus 234 ~~~~~~~~~~lElGG~np~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~-d~f~~~l~~~~~~~~~g~p~ 312 (471)
T cd07139 234 VCGERLARVTLELGGKSAAIVLDDADLDAAVPGLVPASLMNNGQVCVALTRILVPRSRY-DEVVEALAAAVAALKVGDPL 312 (471)
T ss_pred HHHhcCCEEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeHhHH-HHHHHHHHHHHHhCCcCCCC
Confidence 773 7999999999999999999999999999999999976 999999999999999 7999999999877631
Q ss_pred ------------------------------eE-ecCccc----ccc-c-c-C-----CCCCCccccccCceEEEEEeCCH
Q 005074 572 ------------------------------GL-FGGPRA----SKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVDDV 608 (715)
Q Consensus 572 ------------------------------~~-~g~~~~----~~~-~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~ 608 (715)
++ .|+... .++ + | | +++++++||+||||++|++|+|+
T Consensus 313 ~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~ 392 (471)
T cd07139 313 DPATQIGPLASARQRERVEGYIAKGRAEGARLVTGGGRPAGLDRGWFVEPTLFADVDNDMRIAQEEIFGPVLSVIPYDDE 392 (471)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCeEEccEEEecCCCcchHHhCccCCCeEEEeecCCH
Confidence 11 233221 132 3 5 2 36889999999999999999999
Q ss_pred HHHHHHHHhcCCCceeEEEecCHHHHHHHHHhcCcceEEEcCCCCCCCCCccCCcccccccccccccccccccccceEEE
Q 005074 609 RAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTR 688 (715)
Q Consensus 609 deAi~~aN~~~~GL~a~i~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~~~pfG~g~~sG~~~~~~~~~g~~gl~~ft~~K 688 (715)
||||+++|+++|||++||||+|.+++.++++++++|+|+||++. ..+.+||||.+.||+| +++|++|+++||+.|
T Consensus 393 ~eai~~~n~~~~gL~a~i~s~d~~~~~~~~~~l~~G~v~iN~~~-~~~~~PfgG~k~SG~G----~~~g~~~~~~ft~~k 467 (471)
T cd07139 393 DDAVRIANDSDYGLSGSVWTADVERGLAVARRIRTGTVGVNGFR-LDFGAPFGGFKQSGIG----REGGPEGLDAYLETK 467 (471)
T ss_pred HHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCC-CCCCCCCCCcccccCC----ccchHHHHHHHhcee
Confidence 99999999999999999999999999999999999999999876 4567899999999985 356999999999999
Q ss_pred EEE
Q 005074 689 WIL 691 (715)
Q Consensus 689 ~v~ 691 (715)
+|+
T Consensus 468 ~i~ 470 (471)
T cd07139 468 SIY 470 (471)
T ss_pred EEe
Confidence 985
No 81
>cd07136 ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydrogenase ywdH-like. Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD.
Probab=100.00 E-value=2.3e-71 Score=616.33 Aligned_cols=381 Identities=19% Similarity=0.202 Sum_probs=314.0
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhhchhHHHHHHhhcChhHHHHHHHHHHHH
Q 005074 295 EMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRIL 374 (715)
Q Consensus 295 ~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~~ 374 (715)
+.+++|++||+.|+++|..+|.++|++++++|++|+++|+++++.|++|.. .++...++.....++++++..++.+
T Consensus 2 ~~v~~a~~a~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~----~~a~~~ev~~~~~~~~~~~~~~~~~ 77 (449)
T cd07136 2 SLVEKQRAFFKTGATKDVEFRIEQLKKLKQAIKKYENEILEALKKDLGKSE----FEAYMTEIGFVLSEINYAIKHLKKW 77 (449)
T ss_pred hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH----HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 568899999999999999999999999999999999999999987765542 2332223333334444444444444
Q ss_pred hcccccccccccccccCCCeEEEEeeeceeEEEEEcCC-Chh-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHH
Q 005074 375 ADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITS 452 (715)
Q Consensus 375 ~~~~~~~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGN~vvlKps~~tp~t~~~l~~~~~~ 452 (715)
.+.. ..+......+...++.++|+|||++|+|| +|. +.+++++|||++||+||+|||+.||.++..+++++++
T Consensus 78 ~~~~-----~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vi~Kps~~tp~~~~~l~~~~~~ 152 (449)
T cd07136 78 MKPK-----RVKTPLLNFPSKSYIYYEPYGVVLIIAPWNYPFQLALAPLIGAIAAGNTAVLKPSELTPNTSKVIAKIIEE 152 (449)
T ss_pred hCCC-----ccCCccccCCceeEEEEecCeEEEEECCCchHHHHHHHHHHHHHhcCCEEEEECcccchHHHHHHHHHHHH
Confidence 3211 11100001233567889999999999998 585 5679999999999999999999999999999999986
Q ss_pred hcccccCcCceEEecCcchhhHhhcCCCCccEEEeecCHHHHHHHHhhcC---CCEEEecCCcceEEEcCCCCHHHHHHH
Q 005074 453 AIPDTVGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK---IPVLGHADGICHVYVDKSANLDVAKNI 529 (715)
Q Consensus 453 al~~alP~gvv~vv~~~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a~---~~~~lElGGk~p~iV~~dADl~~A~~~ 529 (715)
++|+|++|+|+++.+.+..|.+|+ ||+|+||||+++|+.|+++++ ||+++|||||||+||++|||+|.|++.
T Consensus 153 ----alP~gv~~~v~g~~~~~~~L~~~~-v~~V~fTGS~~~g~~i~~~aa~~~~~v~lElgGknp~iV~~dADld~aa~~ 227 (449)
T cd07136 153 ----TFDEEYVAVVEGGVEENQELLDQK-FDYIFFTGSVRVGKIVMEAAAKHLTPVTLELGGKSPCIVDEDANLKLAAKR 227 (449)
T ss_pred ----hCCCCEEEEEeCChHHHHHHhcCC-CCEEEEECCHHHHHHHHHHHHhcCCCEEEEecCCCeEEECCCCCHHHHHHH
Confidence 499999999996444566666665 999999999999999998773 899999999999999999999999999
Q ss_pred HHhhccCCCc-cccccceEEEcCcccCchhHHHHHHHHHhcCCe-----------------------------EecCccc
Q 005074 530 VIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGVG-----------------------------LFGGPRA 579 (715)
Q Consensus 530 iv~~~f~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~~-----------------------------~~g~~~~ 579 (715)
+++++|.|+| .|+|++|+|||+++| |+|+++|+++++++... +.|+...
T Consensus 228 i~~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~L~~~~~~~~~g~p~~~~~~gpli~~~~~~~i~~~i~~a~~~~gG~~~ 306 (449)
T cd07136 228 IVWGKFLNAGQTCVAPDYVLVHESVK-EKFIKELKEEIKKFYGEDPLESPDYGRIINEKHFDRLAGLLDNGKIVFGGNTD 306 (449)
T ss_pred HHHHHHcccCCcccCCCEEEEcHHHH-HHHHHHHHHHHHHhcCCCCCCCCCccCcCCHHHHHHHHHHHhcceEEECCCcC
Confidence 9999999987 999999999999999 79999999999876211 1233221
Q ss_pred -cc-cc-c-C-----CCCCCccccccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEecCHHHHHHHHHhcCcceEEEcC
Q 005074 580 -SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNA 650 (715)
Q Consensus 580 -~~-~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~i~t~d~~~~~~~~~~l~~G~V~iN~ 650 (715)
.+ ++ | | +++.+++||+||||++|++|+|+||||+++|+++|||++||||+|..++.++++++++|+|+||+
T Consensus 307 ~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~~~~eai~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~ 386 (449)
T cd07136 307 RETLYIEPTILDNVTWDDPVMQEEIFGPILPVLTYDTLDEAIEIIKSRPKPLALYLFSEDKKVEKKVLENLSFGGGCIND 386 (449)
T ss_pred CCCCEEeeEEEecCCCcChHHhccccCCeeEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECC
Confidence 13 33 5 2 36899999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCC--CCCCccCCcccccccccccccccccccccceEEEEEEEcC
Q 005074 651 STRF--CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGN 694 (715)
Q Consensus 651 ~~~~--~~~~pfG~g~~sG~~~~~~~~~g~~gl~~ft~~K~v~~~~ 694 (715)
.... .+.+||||.+.||+| +++|.+|+++||+.|+|+++.
T Consensus 387 ~~~~~~~~~~PfGG~k~SG~G----~~~g~~~l~~~t~~k~v~~~~ 428 (449)
T cd07136 387 TIMHLANPYLPFGGVGNSGMG----SYHGKYSFDTFSHKKSILKKS 428 (449)
T ss_pred ccccccCCCCCccCcCcccCC----cccCHHHHHHhccceEEEEcC
Confidence 7543 367899999999986 356899999999999998864
No 82
>cd07099 ALDH_DDALDH Methylomonas sp. 4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid.
Probab=100.00 E-value=4e-71 Score=621.23 Aligned_cols=395 Identities=18% Similarity=0.156 Sum_probs=330.4
Q ss_pred HHHcCCcceeEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhhc
Q 005074 269 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAG 348 (715)
Q Consensus 269 ~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~g 348 (715)
+|.||+.++++...+ .+|+++++++|++||+.|+++|.++|.++|++++++|++|+++|++++.+|++++..
T Consensus 2 ~P~t~~~~~~~~~~~------~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~-- 73 (453)
T cd07099 2 NPATGEVLGEVPVTD------PAEVAAAVARARAAQRAWAALGVEGRAQRLLRWKRALADHADELAELLHAETGKPRA-- 73 (453)
T ss_pred CCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHH--
Confidence 578899999998888 899999999999999999999999999999999999999999999999877655432
Q ss_pred hhHHHHHHhhcChhHHHHHHHHHHHHhcccc-cccc-cccccccCCCeEEEEeeeceeEEEEEcCC-Chh-hHHHHHHHH
Q 005074 349 YAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQ-ILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 424 (715)
Q Consensus 349 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~g~-~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~A 424 (715)
++. .|+..+++.++++++..+ ..+. ..+......+...+++++|+|||++|+|| +|. +.+++++||
T Consensus 74 --~~~--------~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~l~~A 143 (453)
T cd07099 74 --DAG--------LEVLLALEAIDWAARNAPRVLAPRKVPTGLLMPNKKATVEYRPYGVVGVISPWNYPLLTPMGDIIPA 143 (453)
T ss_pred --HHH--------HHHHHHHHHHHHHHHHHHHhcCCccccCcccCCCceeEEEEecceEEEEECCCChHHHHHHHHHHHH
Confidence 111 234444555554443221 1111 11110001234567889999999999998 586 567899999
Q ss_pred HHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecCcchhhHhhcCCCCccEEEeecCHHHHHHHHhhc--
Q 005074 425 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST-- 501 (715)
Q Consensus 425 LaaGN~vvlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a-- 501 (715)
|++||+||+|||+.+|+++..+++++.+ + +|+|++|+|++..++++.|.+| .+|+|+||||+++|+.|++.+
T Consensus 144 LaaGN~vilKps~~~p~~~~~l~~~l~~----ag~P~g~~~vv~g~~~~~~~l~~~-~vd~V~ftGs~~~g~~i~~~aa~ 218 (453)
T cd07099 144 LAAGNAVVLKPSEVTPLVGELLAEAWAA----AGPPQGVLQVVTGDGATGAALIDA-GVDKVAFTGSVATGRKVMAAAAE 218 (453)
T ss_pred HHcCCEEEEECCccchHHHHHHHHHHHH----cCCCCCeEEEEeCCchHHHHHhcC-CCCEEEEECCHHHHHHHHHHHHh
Confidence 9999999999999999999999999987 7 9999999999644667777777 599999999999999999877
Q ss_pred -CCCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccCchhHHHHHHHHHhcCC--------
Q 005074 502 -KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV-------- 571 (715)
Q Consensus 502 -~~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~f~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~-------- 571 (715)
.+|+++|||||||+||++|||++.|++.+++++|.|+| .|+|++|+|||+++| |+|+++|+++++++.+
T Consensus 219 ~~~~~~lelgG~~p~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~ri~V~~~i~-d~f~~~l~~~~~~l~~G~~~~~~~ 297 (453)
T cd07099 219 RLIPVVLELGGKDPMIVLADADLERAAAAAVWGAMVNAGQTCISVERVYVHESVY-DEFVARLVAKARALRPGADDIGDA 297 (453)
T ss_pred cCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHH-HHHHHHHHHHHHhccCCCCCCCCC
Confidence 38999999999999999999999999999999999987 999999999999999 7999999999887621
Q ss_pred --------------------------eE-ecCccc--cc-cc-c-C-----CCCCCccccccCceEEEEEeCCHHHHHHH
Q 005074 572 --------------------------GL-FGGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDH 614 (715)
Q Consensus 572 --------------------------~~-~g~~~~--~~-~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~ 614 (715)
++ .|+.+. .+ ++ | | +++++++||+||||++|++|+|+||||++
T Consensus 298 ~~gp~i~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptil~~~~~~~~~~~~E~FgPvl~v~~~~~~~eai~~ 377 (453)
T cd07099 298 DIGPMTTARQLDIVRRHVDDAVAKGAKALTGGARSNGGGPFYEPTVLTDVPHDMDVMREETFGPVLPVMPVADEDEAIAL 377 (453)
T ss_pred cccCCcCHHHHHHHHHHHHHHHhCCCEEEeCCCcCCCCCeEEecEEEecCCCCCHHHhCCCcCCeeEEEeeCCHHHHHHH
Confidence 12 233332 23 33 5 2 35789999999999999999999999999
Q ss_pred HHhcCCCceeEEEecCHHHHHHHHHhcCcceEEEcCCCCC--CCCCccCCcccccccccccccccccccccceEEEEEE
Q 005074 615 IHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRF--CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 691 (715)
Q Consensus 615 aN~~~~GL~a~i~t~d~~~~~~~~~~l~~G~V~iN~~~~~--~~~~pfG~g~~sG~~~~~~~~~g~~gl~~ft~~K~v~ 691 (715)
+|+++|||++||||+|.++++++++++++|.|+||+.... .+..||||.|.||+| +++|++|+++||+.|++.
T Consensus 378 ~n~~~~gL~~~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~g----~~~g~~~~~~~t~~k~v~ 452 (453)
T cd07099 378 ANDSRYGLSASVFSRDLARAEAIARRLEAGAVSINDVLLTAGIPALPFGGVKDSGGG----RRHGAEGLREFCRPKAIA 452 (453)
T ss_pred HhCCCCCCeEEEEcCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCCCCCCcccccCC----ccChHHHHHHhcceEEEe
Confidence 9999999999999999999999999999999999987543 467899999999875 357999999999999976
No 83
>cd07112 ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like. NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD.
Probab=100.00 E-value=2.2e-71 Score=622.94 Aligned_cols=396 Identities=19% Similarity=0.200 Sum_probs=334.9
Q ss_pred HHHHcCCcceeEEecCCcccccHhhHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
Q 005074 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSR--RLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQ 345 (715)
Q Consensus 268 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~ 345 (715)
.+|+||+.++++..++ .+|+++++++|++||+ .|+++|.++|.++|++++++|++|+++|++++.+|.+++.
T Consensus 7 ~~P~t~~~i~~~~~~~------~~~v~~av~~a~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~ 80 (462)
T cd07112 7 INPATGRVLAEVAACD------AADVDRAVAAARRAFESGVWSRLSPAERKAVLLRLADLIEAHRDELALLETLDMGKPI 80 (462)
T ss_pred ECCCCCCEEEEEeCCC------HHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcH
Confidence 4578899999998888 8999999999999998 4999999999999999999999999999999887765543
Q ss_pred hhchhHHHHHHhhcChhHHHHHHHHHHHHhcccc-cccccccccccCCCeEEEEeeeceeEEEEEcCC-Chh-hHHHHHH
Q 005074 346 EAGYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIAS 422 (715)
Q Consensus 346 ~~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~ 422 (715)
. ++.. .|+..+++.+++++...+ ..+...+. ..+...+++++|+|||++|+|| ||. +.+++++
T Consensus 81 ~----~a~~-------~ev~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~GvV~~i~p~N~P~~~~~~~~~ 146 (462)
T cd07112 81 S----DALA-------VDVPSAANTFRWYAEAIDKVYGEVAPT---GPDALALITREPLGVVGAVVPWNFPLLMAAWKIA 146 (462)
T ss_pred H----HHHH-------HHHHHHHHHHHHHHHHHHHhcCceecC---CCCeEEEEEEeeeeeEEEECCCchHHHHHHHHHH
Confidence 2 2211 244445555555443221 12222111 1234567889999999999998 685 5679999
Q ss_pred HHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-cchhhHhhcCCCCccEEEeecCHHHHHHHHhh
Q 005074 423 LAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKES 500 (715)
Q Consensus 423 ~ALaaGN~vvlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~ 500 (715)
|||++||+||+|||+.+|.++..+++++.+ + ||+|++|+|++ +.++++.|..||++|+|+||||+.+|+.|++.
T Consensus 147 ~ALaaGN~Vv~Kps~~~p~~~~~l~~~~~~----aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~ 222 (462)
T cd07112 147 PALAAGNSVVLKPAEQSPLTALRLAELALE----AGLPAGVLNVVPGFGHTAGEALGLHMDVDALAFTGSTEVGRRFLEY 222 (462)
T ss_pred HHHHcCCeeeeeCCCCCCHHHHHHHHHHHh----cCCCCCcEEEEeCCCchHHHHHhcCCCcCEEEEECCHHHHHHHHHH
Confidence 999999999999999999999999999986 8 99999999995 66788889999999999999999999999875
Q ss_pred c----CCCEEEecCCcceEEEcCCC-CHHHHHHHHHhhccCCCc-cccccceEEEcCcccCchhHHHHHHHHHhcCC---
Q 005074 501 T----KIPVLGHADGICHVYVDKSA-NLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV--- 571 (715)
Q Consensus 501 a----~~~~~lElGGk~p~iV~~dA-Dl~~A~~~iv~~~f~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~--- 571 (715)
+ .||+++|||||||+||++|| |+|.|++.+++++|.|+| .|+|++|+|||+++| |+|+++|+++++++.+
T Consensus 223 aa~~~~~~~~lelgG~n~~iV~~da~dl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~-~~f~~~l~~~~~~~~~g~p 301 (462)
T cd07112 223 SGQSNLKRVWLECGGKSPNIVFADAPDLDAAAEAAAAGIFWNQGEVCSAGSRLLVHESIK-DEFLEKVVAAAREWKPGDP 301 (462)
T ss_pred HHHhcCCEEEecCCCCCeEEECCCCcCHHHHHHHHHHHHHhccCCCCCCCeeEEEcHHHH-HHHHHHHHHHHhcCCcCCC
Confidence 5 38999999999999999999 999999999999999987 999999999999999 7999999999876522
Q ss_pred -------------------------------eE-ecCccc----cc-cc-c-C-----CCCCCccccccCceEEEEEeCC
Q 005074 572 -------------------------------GL-FGGPRA----SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDD 607 (715)
Q Consensus 572 -------------------------------~~-~g~~~~----~~-~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~ 607 (715)
++ .|+... .+ ++ | | +++++++||+||||++|++|+|
T Consensus 302 ~~~~~~~gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~ 381 (462)
T cd07112 302 LDPATRMGALVSEAHFDKVLGYIESGKAEGARLVAGGKRVLTETGGFFVEPTVFDGVTPDMRIAREEIFGPVLSVITFDS 381 (462)
T ss_pred CCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCCeEEeeEEecCCCCCChHHhCCCCCceEEEEEeCC
Confidence 22 233221 13 33 5 2 3689999999999999999999
Q ss_pred HHHHHHHHHhcCCCceeEEEecCHHHHHHHHHhcCcceEEEcCCCCCCCCCccCCcccccccccccccccccccccceEE
Q 005074 608 VRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTT 687 (715)
Q Consensus 608 ~deAi~~aN~~~~GL~a~i~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~~~pfG~g~~sG~~~~~~~~~g~~gl~~ft~~ 687 (715)
+||||+++|+++|||++||||+|.+++.++++++++|+|+||+.....+.+||||.|+||+| +++|++|+++||+.
T Consensus 382 ~~eai~~~n~~~~gL~~~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~PfgG~k~SG~G----~~~g~~~~~~f~~~ 457 (462)
T cd07112 382 EEEAVALANDSVYGLAASVWTSDLSRAHRVARRLRAGTVWVNCFDEGDITTPFGGFKQSGNG----RDKSLHALDKYTEL 457 (462)
T ss_pred HHHHHHHHhCCCccceEEEEcCCHHHHHHHHHhcCcceEEECCCCCCCCCCCCCCcccccCC----ccchHHHHHHHhce
Confidence 99999999999999999999999999999999999999999997766677899999999985 35699999999999
Q ss_pred EEEEE
Q 005074 688 RWILR 692 (715)
Q Consensus 688 K~v~~ 692 (715)
|++++
T Consensus 458 k~i~~ 462 (462)
T cd07112 458 KTTWI 462 (462)
T ss_pred eEEEC
Confidence 99853
No 84
>cd07092 ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like. NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency.
Probab=100.00 E-value=4.2e-71 Score=620.54 Aligned_cols=396 Identities=18% Similarity=0.205 Sum_probs=336.6
Q ss_pred HHHHcCCcceeEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhh
Q 005074 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 347 (715)
Q Consensus 268 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~ 347 (715)
.+|.||+.++++..++ .+|+++++++|++||+.|+++|.++|.++|++++++|++++++|++++.+|++++..
T Consensus 2 ~~P~t~~~i~~~~~~~------~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~~~~l~~~~~~l~~~~~~e~Gk~~~- 74 (450)
T cd07092 2 VDPATGEEIATVPDAS------AADVDAAVAAAHAAFPSWRRTTPAERSKALLKLADAIEENAEELAALESRNTGKPLH- 74 (450)
T ss_pred cCCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHH-
Confidence 3578999999998888 899999999999999999999999999999999999999999999998877654321
Q ss_pred chhHHHHHHhhcChhHHHHHHHHHHHHhcccccc-cccccccccCCCeEEEEeeeceeEEEEEcCC-Chh-hHHHHHHHH
Q 005074 348 GYAKSLVSRLALKPGKISSLAKSIRILADMEEPI-GQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 424 (715)
Q Consensus 348 g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~A 424 (715)
++. ..|+..+++.+++++...+.. +.... .. ..+...+++|+|+|||++|+|| ||. +.++++++|
T Consensus 75 ---~~~-------~~ev~~~i~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~A 142 (450)
T cd07092 75 ---LVR-------DDELPGAVDNFRFFAGAARTLEGPAAG-EY-LPGHTSMIRREPIGVVAQIAPWNYPLMMAAWKIAPA 142 (450)
T ss_pred ---HHH-------HHHHHHHHHHHHHHHHHHHHhcCcccC-cc-CCCceeEEEEeccceEEEECCCCcHHHHHHHHHHHH
Confidence 111 125667777777766433222 21111 11 1233457889999999999998 686 467999999
Q ss_pred HHhCCEEEEeCCcchHHHHHHHHHHHHHhcccccCcCceEEecC-cchhhHhhcCCCCccEEEeecCHHHHHHHHhhcC-
Q 005074 425 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDTVGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK- 502 (715)
Q Consensus 425 LaaGN~vvlKps~~tp~t~~~l~~~~~~al~~alP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a~- 502 (715)
|++||+||+|||+.+|.++..+.+++++ .||+|++|+|++ ++++++.|..||++|+|+||||+.+|+.|++.+.
T Consensus 143 L~aGN~VIlKps~~~~~~~~~l~~~~~~----glP~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~v~~~a~~ 218 (450)
T cd07092 143 LAAGNTVVLKPSETTPLTTLLLAELAAE----VLPPGVVNVVCGGGASAGDALVAHPRVRMVSLTGSVRTGKKVARAAAD 218 (450)
T ss_pred HHcCCEEEEECCccchHHHHHHHHHHHh----cCCcccEEEeecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhh
Confidence 9999999999999999999999999975 599999999995 4557888888999999999999999999998873
Q ss_pred --CCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccCchhHHHHHHHHHhcCCe-------
Q 005074 503 --IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGVG------- 572 (715)
Q Consensus 503 --~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~f~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~~------- 572 (715)
+|+++|||||||+||++|||||.|++.+++|+|.|+| .|+|++|+|||+++| |+|+++|+++++++.+.
T Consensus 219 ~~~~~~lelgG~~p~iV~~dAdl~~aa~~iv~~~~~~~GQ~C~a~~~v~V~~~i~-~~f~~~l~~~~~~~~~g~p~~~~~ 297 (450)
T cd07092 219 TLKRVHLELGGKAPVIVFDDADLDAAVAGIATAGYYNAGQDCTAACRVYVHESVY-DEFVAALVEAVSAIRVGDPDDEDT 297 (450)
T ss_pred cCCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhhCCCCCCCCcEEEEeHHHH-HHHHHHHHHHHhhCCcCCCCCCCC
Confidence 8999999999999999999999999999999999987 999999999999999 79999999999876321
Q ss_pred --------------------------E-ecCccc--cc-cc-c-C-----CCCCCccccccCceEEEEEeCCHHHHHHHH
Q 005074 573 --------------------------L-FGGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHI 615 (715)
Q Consensus 573 --------------------------~-~g~~~~--~~-~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~a 615 (715)
+ .|+... .+ ++ | | +++++++||+||||++|++|+|+||||+++
T Consensus 298 ~~gpli~~~~~~~i~~~i~~a~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~ 377 (450)
T cd07092 298 EMGPLNSAAQRERVAGFVERAPAHARVLTGGRRAEGPGYFYEPTVVAGVAQDDEIVQEEIFGPVVTVQPFDDEDEAIELA 377 (450)
T ss_pred ccCcccCHHHHHHHHHHHHHHHcCCEEEeCCCCCCCCccEEeeEEEEcCCCCChHHhCCCcCceEEEEEECCHHHHHHHH
Confidence 1 122211 12 23 5 2 358999999999999999999999999999
Q ss_pred HhcCCCceeEEEecCHHHHHHHHHhcCcceEEEcCCCCCCCCCccCCcccccccccccccccccccccceEEEEEE
Q 005074 616 HQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 691 (715)
Q Consensus 616 N~~~~GL~a~i~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~~~pfG~g~~sG~~~~~~~~~g~~gl~~ft~~K~v~ 691 (715)
|+++|||++||||+|.++++++++++++|+|+||+.....+.+||||.+.||+| +++|++|+++||+.|+|.
T Consensus 378 n~~~~gL~~~vft~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~PfgG~~~SG~G----~~~g~~~~~~~~~~k~~~ 449 (450)
T cd07092 378 NDVEYGLASSVWTRDVGRAMRLSARLDFGTVWVNTHIPLAAEMPHGGFKQSGYG----KDLSIYALEDYTRIKHVM 449 (450)
T ss_pred hCCCCCceEEEECCCHHHHHHHHHhcCccEEEECCCCCCCCCCCcCCcccCcCC----CCChHHHHHHHheeeEEe
Confidence 999999999999999999999999999999999998777778999999999985 346999999999999985
No 85
>TIGR01722 MMSDH methylmalonic acid semialdehyde dehydrogenase. In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus.
Probab=100.00 E-value=7.2e-71 Score=621.24 Aligned_cols=399 Identities=15% Similarity=0.132 Sum_probs=336.0
Q ss_pred HHHHHcCCcceeEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHh
Q 005074 267 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 346 (715)
Q Consensus 267 l~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~ 346 (715)
..+|.||+.++++..++ .+|+++++++|++||+.|+++|.++|.++|++++++|++++++|++++..|.+++.
T Consensus 20 ~~~P~t~~~i~~~~~~~------~~~v~~ai~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~- 92 (477)
T TIGR01722 20 VTNPATNEVTTKVAFAS------VDEVDAAVASARETFLTWGQTSLAQRTSVLLRYQALLKEHRDEIAELITAEHGKTH- 92 (477)
T ss_pred eeCCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCH-
Confidence 46688999999999888 89999999999999999999999999999999999999999999999877665432
Q ss_pred hchhHHHHHHhhcChhHHHHHHHHHHHHhccccc-ccccccccccCCCeEEEEeeeceeEEEEEcCC-Chh-hHHHHHHH
Q 005074 347 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 423 (715)
Q Consensus 347 ~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ 423 (715)
.++ ..|+...++.+++++...+. .+...+. . ..+...+++++|+|||++|+|| ||. +.++++++
T Consensus 93 ---~~a--------~~ev~~~i~~~~~~~~~~~~~~g~~~~~-~-~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ 159 (477)
T TIGR01722 93 ---SDA--------LGDVARGLEVVEHACGVNSLLKGETSTQ-V-ATRVDVYSIRQPLGVCAGITPFNFPAMIPLWMFPI 159 (477)
T ss_pred ---HHH--------HHHHHHHHHHHHHHHHHHHHhcCccccc-C-CCCceEEEEEcccceEEEEccCChHHHHHHHHHHH
Confidence 122 23566666766666543321 2322211 0 1233457789999999999998 686 46699999
Q ss_pred HHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecCcchhhHhhcCCCCccEEEeecCHHHHHHHHhhc-
Q 005074 424 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST- 501 (715)
Q Consensus 424 ALaaGN~vvlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a- 501 (715)
||++||+||+|||+.+|.++..+++++.+ + +|+|++|+|+++.+.++.|..||+|++|+||||+.+|+.|++.+
T Consensus 160 ALaaGN~VilKps~~~p~~~~~l~~~l~~----aglP~g~~~~v~g~~~~~~~L~~~~~v~~V~ftGS~~~g~~v~~~a~ 235 (477)
T TIGR01722 160 AIACGNTFVLKPSEKVPSAAVKLAELFSE----AGAPDGVLNVVHGDKEAVDRLLEHPDVKAVSFVGSTPIGRYIHTTGS 235 (477)
T ss_pred HHhcCCEEEeeCcccChHHHHHHHHHHHH----hCcCCCeEEEEeCCHHHHHHHHcCCCcCEEEEECCHHHHHHHHHHHH
Confidence 99999999999999999999999999986 8 99999999996545667778899999999999999999998876
Q ss_pred --CCCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccCchhHHHHHHHHHhcC--------
Q 005074 502 --KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEG-------- 570 (715)
Q Consensus 502 --~~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~f~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~-------- 570 (715)
.||+++|||||||+||++|||+|.|++.+++++|.|+| .|++++|+|||+++ | +|+++|+++++++.
T Consensus 236 ~~~~~v~lElGG~n~~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~rl~v~~~~-~-~f~~~l~~~~~~~~~G~~~~~~ 313 (477)
T TIGR01722 236 AHGKRVQALGGAKNHMVVMPDADKDAAADALVGAAYGAAGQRCMAISAAVLVGAA-D-EWVPEIRERAEKIRIGPGDDPG 313 (477)
T ss_pred hcCCeEEEECCCCCceEECCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEeCcH-H-HHHHHHHHHHhcCCCCCCCCCC
Confidence 37999999999999999999999999999999999987 99999999999998 5 99999999987652
Q ss_pred --------------------------CeEe-cCccc------cc-cc-c-C-----CCCCCccccccCceEEEEEeCCHH
Q 005074 571 --------------------------VGLF-GGPRA------SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVR 609 (715)
Q Consensus 571 --------------------------~~~~-g~~~~------~~-~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~d 609 (715)
++++ |+... .+ ++ | | +++.+++||+||||++|++|+|+|
T Consensus 314 ~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~il~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~V~~~~~~~ 393 (477)
T TIGR01722 314 AEMGPLITPQAKDRVASLIAGGAAEGAEVLLDGRGYKVDGYEEGNWVGPTLLERVPPTMKAYQEEIFGPVLCVLEADTLE 393 (477)
T ss_pred CCcCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCCCeEECCEEeeCCCCCChhhhCCCCCCeEEEEEeCCHH
Confidence 2222 33221 12 23 5 2 357899999999999999999999
Q ss_pred HHHHHHHhcCCCceeEEEecCHHHHHHHHHhcCcceEEEcCCCCCC-CCCccCCcccccccccccccccccccccceEEE
Q 005074 610 AAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFC-DGARFGLGAEVGISTSRIHARGPVGVEGLLTTR 688 (715)
Q Consensus 610 eAi~~aN~~~~GL~a~i~t~d~~~~~~~~~~l~~G~V~iN~~~~~~-~~~pfG~g~~sG~~~~~~~~~g~~gl~~ft~~K 688 (715)
|||+++|+++|||++||||+|.+++++|++++++|.|+||++.... +.+||||.|.||+| +.+++|++|+++||+.|
T Consensus 394 eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~k~SG~G--~~~~~g~~~l~~~~~~k 471 (477)
T TIGR01722 394 EAIALINASPYGNGTAIFTRDGAAARRFQHEIEVGQVGVNVPIPVPLPYFSFTGWKDSFFG--DHHIYGKQGTHFYTRGK 471 (477)
T ss_pred HHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCCCCccccccCC--CCccChHHHHHHhcCee
Confidence 9999999999999999999999999999999999999999865443 56899999999985 33356899999999999
Q ss_pred EEEEc
Q 005074 689 WILRG 693 (715)
Q Consensus 689 ~v~~~ 693 (715)
+++++
T Consensus 472 ~i~~~ 476 (477)
T TIGR01722 472 TVTTR 476 (477)
T ss_pred EEEEe
Confidence 99875
No 86
>cd07111 ALDH_F16 Aldehyde dehydrogenase family 16A1-like. Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence.
Probab=100.00 E-value=2.9e-71 Score=622.39 Aligned_cols=385 Identities=19% Similarity=0.219 Sum_probs=329.3
Q ss_pred HHHHHcCCcceeEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHh
Q 005074 267 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 346 (715)
Q Consensus 267 l~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~ 346 (715)
..+|.+|+.++++..++ .+|+++++++|++||+.|+++|.++|.++|++++++|++|+++|++++.+|.++...
T Consensus 41 ~~nP~t~~~i~~~~~a~------~~~v~~ai~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ 114 (480)
T cd07111 41 TINPATGEVLASVLQAE------EEDVDAAVAAARTAFESWSALPGHVRARHLYRIARHIQKHQRLFAVLESLDNGKPIR 114 (480)
T ss_pred eECCCCCCEEEEEcCCC------HHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH
Confidence 46788999999998888 899999999999999999999999999999999999999999999988876654321
Q ss_pred hchhHHHHHHhhcChhHHHHHHHHHHHHhcccccccccccccccCCCeEEEEeeeceeEEEEEcCC-Chh-hHHHHHHHH
Q 005074 347 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 424 (715)
Q Consensus 347 ~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~A 424 (715)
++.. .++...++.+++++++.+... + .+..++|+|||++|+|| ||. +.++++++|
T Consensus 115 ----~a~~-------~ev~~~~~~~~~~~~~~~~~~----------~--~~~~~~P~GVV~~I~PwN~P~~~~~~~i~~A 171 (480)
T cd07111 115 ----ESRD-------CDIPLVARHFYHHAGWAQLLD----------T--ELAGWKPVGVVGQIVPWNFPLLMLAWKICPA 171 (480)
T ss_pred ----HHHH-------HHHHHHHHHHHHHHHHHHHhc----------C--CcccceecceEEEECCCccHHHHHHHHHHHH
Confidence 2211 245556666665544322110 1 12457999999999998 685 567999999
Q ss_pred HHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecCcchhhHhhcCCCCccEEEeecCHHHHHHHHhhc--
Q 005074 425 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST-- 501 (715)
Q Consensus 425 LaaGN~vvlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a-- 501 (715)
|++||+||+|||+.||.++..+++++.+ + ||+|++|+|++..+++..|..||++|+|+||||+.+|+.|++.+
T Consensus 172 LaaGN~VVlKps~~tp~~~~~l~~~~~~----aGlP~gvv~~v~g~~~~~~~l~~~~~v~~v~ftGs~~~g~~v~~~aa~ 247 (480)
T cd07111 172 LAMGNTVVLKPAEYTPLTALLFAEICAE----AGLPPGVLNIVTGNGSFGSALANHPGVDKVAFTGSTEVGRALRRATAG 247 (480)
T ss_pred HHcCCEEEEECCCCChHHHHHHHHHHHh----cCCCcccEEEEeCCchHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhc
Confidence 9999999999999999999999999886 8 99999999996546788888999999999999999999998877
Q ss_pred -CCCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccCchhHHHHHHHHHhcCC--------
Q 005074 502 -KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV-------- 571 (715)
Q Consensus 502 -~~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~f~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~-------- 571 (715)
.||+++|||||||+||++|||+|.|++.+++++|.|+| .|++++|+|||+++| |+|+++|+++++++.+
T Consensus 248 ~~~~~~lElGGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~a~~ri~V~~~i~-d~f~~~l~~~~~~~~vg~p~~~~~ 326 (480)
T cd07111 248 TGKKLSLELGGKSPFIVFDDADLDSAVEGIVDAIWFNQGQVCCAGSRLLVQESVA-EELIRKLKERMSHLRVGDPLDKAI 326 (480)
T ss_pred cCCcEEEEcCCCceEEECCCCCHHHHHHHHHHHHHhcCCCcCcCCceEEEcHHHH-HHHHHHHHHHHHhcCCCCCCCCCC
Confidence 38999999999999999999999999999999999976 999999999999999 7999999999887632
Q ss_pred --------------------------eEe-cCccc--ccc-c-c-C-----CCCCCccccccCceEEEEEeCCHHHHHHH
Q 005074 572 --------------------------GLF-GGPRA--SKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDH 614 (715)
Q Consensus 572 --------------------------~~~-g~~~~--~~~-~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~ 614 (715)
.++ |+... .++ + | | +++++++||+||||++|++|+|+||||++
T Consensus 327 ~~gpli~~~~~~~v~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~deai~~ 406 (480)
T cd07111 327 DMGAIVDPAQLKRIRELVEEGRAEGADVFQPGADLPSKGPFYPPTLFTNVPPASRIAQEEIFGPVLVVLTFRTAKEAVAL 406 (480)
T ss_pred ccccccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEeeEEEecCCCCChhhcCCCCCCeeEeecCCCHHHHHHH
Confidence 111 22111 122 2 5 2 35889999999999999999999999999
Q ss_pred HHhcCCCceeEEEecCHHHHHHHHHhcCcceEEEcCCCCCCCCCccCCcccccccccccccccccccccceEEEE
Q 005074 615 IHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRW 689 (715)
Q Consensus 615 aN~~~~GL~a~i~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~~~pfG~g~~sG~~~~~~~~~g~~gl~~ft~~K~ 689 (715)
+|+++|||++||||+|.+++.++++++++|+|+||++....+..||||.|.||+| +++|++|+++||+.|+
T Consensus 407 ~n~~~~gL~~~i~t~d~~~~~~~~~~l~aG~v~iN~~~~~~~~~PfGG~k~SG~G----~~~g~~~~~~~~~~k~ 477 (480)
T cd07111 407 ANNTPYGLAASVWSENLSLALEVALSLKAGVVWINGHNLFDAAAGFGGYRESGFG----REGGKEGLYEYLRPSW 477 (480)
T ss_pred HhCCCCCceEEEEcCCHHHHHHHHHhCCEeeEEECCCCCCCCCCCcCCcccccCC----ccchHHHHHHHhhccC
Confidence 9999999999999999999999999999999999998777777899999999986 3569999999999985
No 87
>cd07121 ALDH_EutE Ethanolamine utilization protein EutE-like. Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), converts acetaldehyde into acetyl-CoA. This CD is limited to such monofunctional enzymes as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium. Mutations in eutE abolish the ability to utilize ethanolamine as a carbon source.
Probab=100.00 E-value=5e-71 Score=610.93 Aligned_cols=372 Identities=17% Similarity=0.206 Sum_probs=302.9
Q ss_pred HhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhhchhHHHHHHhhcChhHHHHHHH
Q 005074 290 QVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAK 369 (715)
Q Consensus 290 ~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~i~~~~~ 369 (715)
-+|+++|+++|++||+.|+++|.++|.++|++++++|++|+++|++++.+|.+++. .++. ++
T Consensus 3 ~~~v~~av~~A~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~----~~~~--------------~~ 64 (429)
T cd07121 3 FATVDDAVAAAKAAQKQYRKCTLADREKIIEAIREALLSNAEELAEMAVEETGMGR----VEDK--------------IA 64 (429)
T ss_pred hhhHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH----HHHH--------------HH
Confidence 36999999999999999999999999999999999999999999999877665432 1111 11
Q ss_pred HHHHHhccccccccc-c-cccccCCCeEEEEeeeceeEEEEEcCC-Chh-hHHHHHHHHHHhCCEEEEeCCcchHHHHHH
Q 005074 370 SIRILADMEEPIGQI-L-KRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAI 445 (715)
Q Consensus 370 ~~~~~~~~~~~~g~~-~-~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGN~vvlKps~~tp~t~~~ 445 (715)
.++++++.. .+.. . +......+...+++|+|+|||++|+|| ||. +.++++++||++||+||+|||+.||+|+.+
T Consensus 65 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKpse~tp~t~~~ 142 (429)
T cd07121 65 KNHLAAEKT--PGTEDLTTTAWSGDNGLTLVEYAPFGVIGAITPSTNPTETIINNSISMLAAGNAVVFNPHPGAKKVSAY 142 (429)
T ss_pred HHHHHHHhc--CcccccccccccCCCcceEEEEcccceEEEEccCCCchhHHHHHHHHHHHcCCCEEEECCccchhHHHH
Confidence 222222110 0110 0 000001122356788999999999998 685 677999999999999999999999999999
Q ss_pred HHHHHHHhcccc-cCcCceEEecC-cchhhHhhcCCCCccEEEeecCHHHHHHHHhhcCCCEEEecCCcceEEEcCCCCH
Q 005074 446 LHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANL 523 (715)
Q Consensus 446 l~~~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a~~~~~lElGGk~p~iV~~dADl 523 (715)
+++++++++.++ +|+|++|+|++ +.++++.|..||+||+|+||||+++|+.|++. .||+++|||||||+||++||||
T Consensus 143 l~~l~~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~I~fTGs~~~g~~v~~~-~k~~~lelGGk~p~iV~~dADl 221 (429)
T cd07121 143 AVELINKAIAEAGGPDNLVVTVEEPTIETTNELMAHPDINLLVVTGGPAVVKAALSS-GKKAIGAGAGNPPVVVDETADI 221 (429)
T ss_pred HHHHHHHHHHHcCCCcceEEEecCCChHHHHHHHcCCCccEEEeeCCHHHHHHHHhC-CCceEeecCCCceEEEecCCCH
Confidence 999999888889 99999999995 55677888889999999999999999999876 5999999999999999999999
Q ss_pred HHHHHHHHhhccCCCc-cccccceEEEcCcccCchhHHHHHHHHHhc----------------------CCeE-ecCcc-
Q 005074 524 DVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHE----------------------GVGL-FGGPR- 578 (715)
Q Consensus 524 ~~A~~~iv~~~f~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~----------------------~~~~-~g~~~- 578 (715)
|+|++.+++|+|.|+| +|+|++|+|||++|| |+|+++|+++ ..+ |.++ .|+..
T Consensus 222 d~Aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~-d~f~~~L~~~-~~~~i~~~~~~~v~~~i~~a~~~~~ga~~~~gg~~~ 299 (429)
T cd07121 222 EKAARDIVQGASFDNNLPCIAEKEVIAVDSVA-DYLIAAMQRN-GAYVLNDEQAEQLLEVVLLTNKGATPNKKWVGKDAS 299 (429)
T ss_pred HHHHHHHHhcccccCCCCCCccceEEEeHHHH-HHHHHHHHHC-CCEEcCHHHHHHHHHhhcccCCCccccccccCcCHH
Confidence 9999999999999987 999999999999999 7999999876 211 0111 12211
Q ss_pred -c---cccc-----c-C-----CCCCCccccccCceEEEEEeCCHHHHHHHHHhcCCCc--eeEEEecCHHHHHHHHHhc
Q 005074 579 -A---SKLL-----Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAH--TDCIVAEDQKVAETFLCQV 641 (715)
Q Consensus 579 -~---~~~~-----p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL--~a~i~t~d~~~~~~~~~~l 641 (715)
. .+++ | | ++|++++||+||||++|++|+|+||||+++|+++||| ++||||+|.+++++|++++
T Consensus 300 ~~~~~~G~~~~~~~ptil~~v~~~~~i~~eE~FgPVl~v~~~~~~~eAi~~an~~~~GLghsa~I~t~d~~~a~~~a~~l 379 (429)
T cd07121 300 KILKAAGIEVPADIRLIIVETDKDHPFVVEEQMMPILPVVRVKNFDEAIELAVELEHGNRHTAIIHSKNVENLTKMARAM 379 (429)
T ss_pred HHHHHcCCCCCCCCeEEEEecCCCCCccccccccceEEEEEeCCHHHHHHHHHhhccCCCceEEEecCCHHHHHHHHhhC
Confidence 0 1222 3 2 3689999999999999999999999999999999999 9999999999999999999
Q ss_pred CcceEEEcCCCCCCCCCccCCcccccccccccccccccccccceEEEEEEE
Q 005074 642 DSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILR 692 (715)
Q Consensus 642 ~~G~V~iN~~~~~~~~~pfG~g~~sG~~~~~~~~~g~~gl~~ft~~K~v~~ 692 (715)
++|+||||.++. ..+||||.|.|+++- +|+.| +..+..|+++.
T Consensus 380 ~aG~v~iN~~~~--~~~p~gG~k~s~~~~-----~~~~~-~~~~~~~~~~~ 422 (429)
T cd07121 380 QTTIFVKNGPSY--AGLGVGGEGYTTFTI-----AGPTG-EGLTSARTFTR 422 (429)
T ss_pred CceEEEEcCCCc--CccccCCCccceEEe-----cCCcC-cCccChhhhhe
Confidence 999999998754 568999999888742 25555 56677776654
No 88
>cd07135 ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins. Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD.
Probab=100.00 E-value=9.2e-71 Score=611.74 Aligned_cols=383 Identities=21% Similarity=0.213 Sum_probs=317.7
Q ss_pred HhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhhchhHHHHHHhhcChhHHHHHHH
Q 005074 290 QVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAK 369 (715)
Q Consensus 290 ~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~i~~~~~ 369 (715)
.+|+++|+++|++||+.|+.+|.++|.++|++++++|++|+++|++++++|++++.. ++...++..+...+++++.
T Consensus 4 ~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~----e~~~~ev~~~~~~~~~~a~ 79 (436)
T cd07135 4 LDEIDSIHSRLRATFRSGKTKDLEYRLWQLKQLYWAVKDNEEAIVEALKKDLGRPPF----ETLLTEVSGVKNDILHMLK 79 (436)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHH----HHhHHHHHHHHHHHHHHHH
Confidence 689999999999999999999999999999999999999999999999988876532 3322333334445555555
Q ss_pred HHHHHhcccccccccccccccCCCeEEEEeeeceeEEEEEcCC-Chh-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHH
Q 005074 370 SIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILH 447 (715)
Q Consensus 370 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGN~vvlKps~~tp~t~~~l~ 447 (715)
.++.+.....+..... . ..+...+++++|+|||++|+|| +|. +++++++|||++||+||+|||+.+|.++..++
T Consensus 80 ~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~l~ 155 (436)
T cd07135 80 NLKKWAKDEKVKDGPL---A-FMFGKPRIRKEPLGVVLIIGPWNYPVLLALSPLVGAIAAGCTVVLKPSELTPHTAALLA 155 (436)
T ss_pred HHHHhhCCcccCCccc---c-cCCCceEEEeccCcEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCccChHHHHHHH
Confidence 5544432111111000 0 0123457789999999999998 685 67899999999999999999999999999999
Q ss_pred HHHHHhcccccCcCceEEecC-cchhhHhhcCCCCccEEEeecCHHHHHHHHhhc---CCCEEEecCCcceEEEcCCCCH
Q 005074 448 KVITSAIPDTVGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST---KIPVLGHADGICHVYVDKSANL 523 (715)
Q Consensus 448 ~~~~~al~~alP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a---~~~~~lElGGk~p~iV~~dADl 523 (715)
+++++ .||+|++|+|++ ++++++ |..|| +|+|+||||+.+|+.|++.+ .+|+++|||||||+||++|||+
T Consensus 156 ~l~~~----~lP~g~v~vv~g~~~~~~~-l~~~~-vd~v~ftGs~~~g~~i~~~aa~~~~~~~lelgG~~~~iV~~dADl 229 (436)
T cd07135 156 ELVPK----YLDPDAFQVVQGGVPETTA-LLEQK-FDKIFYTGSGRVGRIIAEAAAKHLTPVTLELGGKSPVIVTKNADL 229 (436)
T ss_pred HHHHH----hCCcCEEEEEcCCchhHHH-HHhCC-CCEEEEECCcHHHHHHHHHHHhcCCCeEEEccCCCcEEECCCCCH
Confidence 99986 599999999995 556666 55688 99999999999999998876 3899999999999999999999
Q ss_pred HHHHHHHHhhccCCCc-cccccceEEEcCcccCchhHHHHHHHHHhcCCe------------------------------
Q 005074 524 DVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGVG------------------------------ 572 (715)
Q Consensus 524 ~~A~~~iv~~~f~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~~------------------------------ 572 (715)
|.|++.+++++|.|+| .|+|++|||||++|| |+|+++|+++++++...
T Consensus 230 ~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~g~p~~~~~~gpli~~~~~~~i~~~v~~ag~~ 308 (436)
T cd07135 230 ELAAKRILWGKFGNAGQICVAPDYVLVDPSVY-DEFVEELKKVLDEFYPGGANASPDYTRIVNPRHFNRLKSLLDTTKGK 308 (436)
T ss_pred HHHHHHHHHHHhccCCceecCCCEEeccHHHH-HHHHHHHHHHHHHhcCCCCCCCCCcCCCCCHHHHHHHHHHHHhcCCe
Confidence 9999999999999987 999999999999999 79999999998766221
Q ss_pred E-ecCccc-cc-cc-c-C-----CCCCCccccccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEecCHHHHHHHHHhcC
Q 005074 573 L-FGGPRA-SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVD 642 (715)
Q Consensus 573 ~-~g~~~~-~~-~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~i~t~d~~~~~~~~~~l~ 642 (715)
+ .|+... .+ ++ | | +++++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++++++++
T Consensus 309 v~~gg~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~deai~~an~~~~gL~~~v~t~d~~~a~~~~~~l~ 388 (436)
T cd07135 309 VVIGGEMDEATRFIPPTIVSDVSWDDSLMSEELFGPVLPIIKVDDLDEAIKVINSRDTPLALYIFTDDKSEIDHILTRTR 388 (436)
T ss_pred EEECCCcCCCCCEEccEEEecCCCccHHHhccccCCceEEEecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHhcCC
Confidence 1 122211 12 23 5 2 357899999999999999999999999999999999999999999999999999999
Q ss_pred cceEEEcCCCCC--CCCCccCCcccccccccccccccccccccceEEEEEE
Q 005074 643 SAAVFHNASTRF--CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 691 (715)
Q Consensus 643 ~G~V~iN~~~~~--~~~~pfG~g~~sG~~~~~~~~~g~~gl~~ft~~K~v~ 691 (715)
+|.|+||+++.. .+..||||.|.||+| +++|++|+++||+.|+|.
T Consensus 389 ~g~v~iN~~~~~~~~~~~PfGG~k~SG~G----~~~g~~~l~~~t~~k~i~ 435 (436)
T cd07135 389 SGGVVINDTLIHVGVDNAPFGGVGDSGYG----AYHGKYGFDTFTHERTVV 435 (436)
T ss_pred cCeEEECCccccccCCCCCcCCcCcccCC----ccccHhHHHHhccccccc
Confidence 999999987543 367899999999986 356999999999999874
No 89
>cd07114 ALDH_DhaS Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like. Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD.
Probab=100.00 E-value=6.6e-71 Score=619.46 Aligned_cols=395 Identities=20% Similarity=0.230 Sum_probs=337.4
Q ss_pred HHHcCCcceeEEecCCcccccHhhHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHh
Q 005074 269 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSR--RLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 346 (715)
Q Consensus 269 ~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~ 346 (715)
+|.||+.++++..++ .+++++++++|++||+ .|+.+|.++|.++|++++++|.+++++|++++.+|.+++..
T Consensus 3 ~P~tg~~i~~~~~~~------~~~v~~av~~a~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~ 76 (457)
T cd07114 3 NPATGEPWARVPEAS------AADVDRAVAAARAAFEGGAWRKLTPTERGKLLRRLADLIEANAEELAELETRDNGKLIR 76 (457)
T ss_pred CCCCCCEEEEEeCCC------HHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHH
Confidence 578999999999888 8999999999999997 49999999999999999999999999999988766544321
Q ss_pred hchhHHHHHHhhcChhHHHHHHHHHHHHhcccccc-cccccccccCCCeEEEEeeeceeEEEEEcCC-Chh-hHHHHHHH
Q 005074 347 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEPI-GQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 423 (715)
Q Consensus 347 ~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ 423 (715)
++ ..+++.+++.+++++...+.. +...+. ...+...+++++|+|||++|+|| ||. +.++++++
T Consensus 77 ----~~--------~~ev~~~~~~~~~~a~~~~~~~~~~~~~--~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ 142 (457)
T cd07114 77 ----ET--------RAQVRYLAEWYRYYAGLADKIEGAVIPV--DKGDYLNFTRREPLGVVAAITPWNSPLLLLAKKLAP 142 (457)
T ss_pred ----HH--------HHHHHHHHHHHHHHHHHHHHhcCccccc--CCCCceEEEEEecceEEEEECCCccHHHHHHHHHHH
Confidence 11 236777777777766433221 222211 01234567889999999999998 585 67899999
Q ss_pred HHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-cchhhHhhcCCCCccEEEeecCHHHHHHHHhhc
Q 005074 424 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST 501 (715)
Q Consensus 424 ALaaGN~vvlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a 501 (715)
||++||+||+|||+.+|+++..+++++.+ + ||+|+||+|++ +.++++.|..|+++++|+||||+.+|+.+++.+
T Consensus 143 AL~aGN~Vilkps~~~p~~~~~l~~~l~~----aglP~~vv~~v~g~~~~~~~~l~~~~~i~~V~ftGs~~~g~~v~~~a 218 (457)
T cd07114 143 ALAAGNTVVLKPSEHTPASTLELAKLAEE----AGFPPGVVNVVTGFGPETGEALVEHPLVAKIAFTGGTETGRHIARAA 218 (457)
T ss_pred HHhcCCeEEeECCccchHHHHHHHHHHHH----cCcCCCcEEEEeCCCchHHHHHhcCCCCCEEEEECCHHHHHHHHHHH
Confidence 99999999999999999999999999986 8 99999999995 556788888999999999999999999999877
Q ss_pred ---CCCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccCchhHHHHHHHHHhcC-------
Q 005074 502 ---KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEG------- 570 (715)
Q Consensus 502 ---~~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~f~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~------- 570 (715)
.||+++|||||||+||++|||++.|++.+++|+|.|+| .|+|++|+|||+++| |+|+++|+++++++.
T Consensus 219 a~~~~~~~lelgG~~~~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~-~~f~~~l~~~~~~~~~g~p~~~ 297 (457)
T cd07114 219 AENLAPVTLELGGKSPNIVFDDADLDAAVNGVVAGIFAAAGQTCVAGSRLLVQRSIY-DEFVERLVARARAIRVGDPLDP 297 (457)
T ss_pred HhcCCeEEEecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCCCCceEEEcHHHH-HHHHHHHHHHHHhCCCCCCCCC
Confidence 38999999999999999999999999999999999887 999999999999999 799999999987652
Q ss_pred ---------------------------CeE-ecCccc------cc-cc-c-C-----CCCCCccccccCceEEEEEeCCH
Q 005074 571 ---------------------------VGL-FGGPRA------SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDV 608 (715)
Q Consensus 571 ---------------------------~~~-~g~~~~------~~-~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~ 608 (715)
+++ .|+... .+ ++ | | +++++++||+||||++|++|+|+
T Consensus 298 ~~~~gpli~~~~~~~~~~~i~~a~~~ga~~l~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~ 377 (457)
T cd07114 298 ETQMGPLATERQLEKVERYVARAREEGARVLTGGERPSGADLGAGYFFEPTILADVTNDMRIAQEEVFGPVLSVIPFDDE 377 (457)
T ss_pred CCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCCEECCEEEeCCCCCChhhhcCCcCceEEEeccCCH
Confidence 222 233221 12 33 5 2 36889999999999999999999
Q ss_pred HHHHHHHHhcCCCceeEEEecCHHHHHHHHHhcCcceEEEcCCCCCCCCCccCCcccccccccccccccccccccceEEE
Q 005074 609 RAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTR 688 (715)
Q Consensus 609 deAi~~aN~~~~GL~a~i~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~~~pfG~g~~sG~~~~~~~~~g~~gl~~ft~~K 688 (715)
||||+++|+++|||++||||+|.+.++++++++++|+|+||++....+.+||||.++||+| +++|++|+++||+.|
T Consensus 378 deai~~~n~~~~gL~~~ift~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~k~SG~G----~~~g~~~~~~f~~~k 453 (457)
T cd07114 378 EEAIALANDSEYGLAAGIWTRDLARAHRVARAIEAGTVWVNTYRALSPSSPFGGFKDSGIG----RENGIEAIREYTQTK 453 (457)
T ss_pred HHHHHHhhCCCcCceeEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCCCCCccCcCC----ccchHHHHHHHhcee
Confidence 9999999999999999999999999999999999999999998777778899999999986 246999999999999
Q ss_pred EEEE
Q 005074 689 WILR 692 (715)
Q Consensus 689 ~v~~ 692 (715)
++++
T Consensus 454 ~~~~ 457 (457)
T cd07114 454 SVWI 457 (457)
T ss_pred EEeC
Confidence 9863
No 90
>cd07105 ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-like. Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD.
Probab=100.00 E-value=1.2e-70 Score=612.91 Aligned_cols=378 Identities=21% Similarity=0.253 Sum_probs=320.1
Q ss_pred hHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhhchhHHHHHHhhcChhHHHHHHHHH
Q 005074 292 GAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSI 371 (715)
Q Consensus 292 ~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~ 371 (715)
|+++++++|++||+.|+++|.++|.++|++++++|++|.++|++++++|++++.. ++ ..++..+++.+
T Consensus 1 ~v~~ai~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~----~~--------~~ei~~~~~~l 68 (432)
T cd07105 1 DADQAVEAAAAAFPAWSKTPPSERRDILLKAADLLESRRDEFIEAMMEETGATAA----WA--------GFNVDLAAGML 68 (432)
T ss_pred CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHhCCCHH----HH--------HHHHHHHHHHH
Confidence 5789999999999999999999999999999999999999999999877755421 11 12566666777
Q ss_pred HHHhccccc-ccccccccccCCCeEEEEeeeceeEEEEEcCC-Chh-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHH
Q 005074 372 RILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHK 448 (715)
Q Consensus 372 ~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGN~vvlKps~~tp~t~~~l~~ 448 (715)
+++++..+. .+...+.. ..+...+++++|+|||++|+|| +|. ++++++++||++||+||+|||+.+|+|+..+.+
T Consensus 69 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~ 146 (432)
T cd07105 69 REAASLITQIIGGSIPSD--KPGTLAMVVKEPVGVVLGIAPWNAPVILGTRAIAYPLAAGNTVVLKASELSPRTHWLIGR 146 (432)
T ss_pred HHHHHHHHHhcCeecccC--CCCceeEEEEecceEEEEECCcCcHHHHHHHHHHHHHhcCCEEEEECCccChHHHHHHHH
Confidence 766643322 12222211 1234567889999999999998 685 578999999999999999999999999999999
Q ss_pred HHHHhcccc-cCcCceEEecCc----chhhHhhcCCCCccEEEeecCHHHHHHHHhhcC---CCEEEecCCcceEEEcCC
Q 005074 449 VITSAIPDT-VGEKLIGLVTSR----EEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK---IPVLGHADGICHVYVDKS 520 (715)
Q Consensus 449 ~~~~al~~a-lP~gvv~vv~~~----~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a~---~~~~lElGGk~p~iV~~d 520 (715)
++.+ + ||+|++|++++. .++++.|..||+||+|+||||+.+|+.|++++. +|+++|||||||+||++|
T Consensus 147 ~~~~----aGlP~gv~~~v~g~~~~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElgGk~p~iV~~d 222 (432)
T cd07105 147 VFHE----AGLPKGVLNVVTHSPEDAPEVVEALIAHPAVRKVNFTGSTRVGRIIAETAAKHLKPVLLELGGKAPAIVLED 222 (432)
T ss_pred HHHH----cCcCCCcEEEEeCCCCchHHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeEEEeCCCCCceEECCC
Confidence 9986 7 999999999842 246788889999999999999999999998773 899999999999999999
Q ss_pred CCHHHHHHHHHhhccCCCc-cccccceEEEcCcccCchhHHHHHHHHHhcC-----------------------------
Q 005074 521 ANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEG----------------------------- 570 (715)
Q Consensus 521 ADl~~A~~~iv~~~f~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~----------------------------- 570 (715)
||+|.|++.+++++|.|+| .|++++|+|||+++| |+|+++|+++++++.
T Consensus 223 adl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~-~~f~~~l~~~~~~~~~g~~~~gp~i~~~~~~~~~~~i~~a~~~g 301 (432)
T cd07105 223 ADLDAAANAALFGAFLNSGQICMSTERIIVHESIA-DEFVEKLKAAAEKLFAGPVVLGSLVSAAAADRVKELVDDALSKG 301 (432)
T ss_pred CCHHHHHHHHHHHHHhcCCCCCcCCceEEEcHHHH-HHHHHHHHHHHHhhcCCCCcccccCCHHHHHHHHHHHHHHHHCC
Confidence 9999999999999999987 999999999999999 799999999987542
Q ss_pred CeE-ecCccc---cc-cc-c-C-----CCCCCccccccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEecCHHHHHHHH
Q 005074 571 VGL-FGGPRA---SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFL 638 (715)
Q Consensus 571 ~~~-~g~~~~---~~-~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~i~t~d~~~~~~~~ 638 (715)
.++ .|+... .+ ++ | | +++++++||+||||++|++|+|.||||+++|+++|||++||||+|.+++++++
T Consensus 302 a~~~~gg~~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~deai~~~n~~~~gL~~~v~t~d~~~~~~~~ 381 (432)
T cd07105 302 AKLVVGGLADESPSGTSMPPTILDNVTPDMDIYSEESFGPVVSIIRVKDEEEAVRIANDSEYGLSAAVFTRDLARALAVA 381 (432)
T ss_pred CEEEeCCCcCCCCCCeEEeeEEEecCCCCCHHHhCCCcCCeEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHH
Confidence 222 243322 23 33 5 2 35789999999999999999999999999999999999999999999999999
Q ss_pred HhcCcceEEEcCCCCC-CCCCccCCcccccccccccccccccccccceEEEEEEE
Q 005074 639 CQVDSAAVFHNASTRF-CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILR 692 (715)
Q Consensus 639 ~~l~~G~V~iN~~~~~-~~~~pfG~g~~sG~~~~~~~~~g~~gl~~ft~~K~v~~ 692 (715)
+++++|.|+||+++.. .+.+||||.+.||+| +++|++|+++||+.|+|++
T Consensus 382 ~~l~~g~v~vN~~~~~~~~~~PfgG~~~SG~G----~~~g~~~l~~~~~~k~v~~ 432 (432)
T cd07105 382 KRIESGAVHINGMTVHDEPTLPHGGVKSSGYG----RFNGKWGIDEFTETKWITI 432 (432)
T ss_pred HhCCcCeEEECCCCCCCCCCCCCCCccccccc----ccChHHHHHHhhceEEEeC
Confidence 9999999999997654 467899999999986 2469999999999999863
No 91
>PF00171 Aldedh: Aldehyde dehydrogenase family; InterPro: IPR015590 Aldehyde dehydrogenases (1.2.1.3 from EC and 1.2.1.5 from EC) are enzymes that oxidize a wide variety of aliphatic and aromatic aldehydes using NADP as a cofactor. In mammals at least four different forms of the enzyme are known []: class-1 (or Ald C) a tetrameric cytosolic enzyme, class-2 (or Ald M) a tetrameric mitochondrial enzyme, class- 3 (or Ald D) a dimeric cytosolic enzyme, and class IV a microsomal enzyme. Aldehyde dehydrogenases have also been sequenced from fungal and bacterial species. A number of enzymes are known to be evolutionary related to aldehyde dehydrogenases. A glutamic acid and a cysteine residue have been implicated in the catalytic activity of mammalian aldehyde dehydrogenase. These residues are conserved in all the enzymes of this entry. Some of the proteins in this entry are allergens. Allergies are hypersensitivity reactions of the immune system to specific substances called allergens (such as pollen, stings, drugs, or food) that, in most people, result in no symptoms. A nomenclature system has been established for antigens (allergens) that cause IgE-mediated atopic allergies in humans [WHO/IUIS Allergen Nomenclature Subcommittee King T.P., Hoffmann D., Loewenstein H., Marsh D.G., Platts-Mills T.A.E., Thomas W. Bull. World Health Organ. 72:797-806(1994)]. This nomenclature system is defined by a designation that is composed of the first three letters of the genus; a space; the first letter of the species name; a space and an arabic number. In the event that two species names have identical designations, they are discriminated from one another by adding one or more letters (as necessary) to each species designation. The allergens in this family include allergens with the following designations: Alt a 10 and Cla h 3.; GO: 0016491 oxidoreductase activity, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 3R31_A 3HAZ_A 1UXQ_A 1UXP_A 1UXR_A 1UXU_A 1UXN_A 1KY8_A 1UXT_A 1UXV_A ....
Probab=100.00 E-value=3.6e-71 Score=622.46 Aligned_cols=393 Identities=22% Similarity=0.287 Sum_probs=333.6
Q ss_pred HHHHcCCcceeEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhh
Q 005074 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 347 (715)
Q Consensus 268 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~ 347 (715)
.+|.+|+.++++..++ .+|+++++++|++||+.|+.+|.++|.++|++++++|++|+++|++++..|++++..
T Consensus 12 ~~P~t~~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~- 84 (462)
T PF00171_consen 12 INPATGEVIGEVPSAT------AEDVDRAVEAARAAFKEWSKLPAAERARILERFADLLEERRDELAELIALETGKPIA- 84 (462)
T ss_dssp EETTTECEEEEEEEBS------HHHHHHHHHHHHHHHHHHTTSSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTSSHH-
T ss_pred CCCCCcCEEEEEcCCC------HHHHHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHHHhhcccccccccccccccccc-
Confidence 3477899999999888 899999999999999999999999999999999999999999999999877655422
Q ss_pred chhHHHHHHhhcChhHHHHHHHHHHHHhccccc-ccccccccccCCCeEEEEeeeceeEEEEEcCC-Chh-hHHHHHHHH
Q 005074 348 GYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 424 (715)
Q Consensus 348 g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~A 424 (715)
++. .++..+++.++++++..+. .++..+. +.+...+++++|+|||++|+|| +|. +.++++++|
T Consensus 85 ---~a~--------~ev~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~A 150 (462)
T PF00171_consen 85 ---EAR--------GEVDRAIDFLRYYADAARKLAGEVLPS---DPGSRNYTRREPLGVVLIITPWNFPLYLAVWKIAPA 150 (462)
T ss_dssp ---HHH--------HHHHHHHHHHHHHHHHHHHHTEEEEEE---STTEEEEEEEEE-SEEEEEE-SSSCTHHHHHHHHHH
T ss_pred ---ccc--------chhhhhhhhhhhhhhcccceehhhccc---ccccccccccccccceeecccccccccccccchhhh
Confidence 222 2566666666666644332 2322221 2466788999999999999998 685 568999999
Q ss_pred HHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-cchhhHhhcCCCCccEEEeecCHHHHHHHHhhcC
Q 005074 425 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK 502 (715)
Q Consensus 425 LaaGN~vvlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a~ 502 (715)
|++||+||+|||+.+|.++.++++++++ + +|+|++|++++ +.+++..|..||++++|+||||+++|+.|++.+.
T Consensus 151 LaaGN~VVlkps~~~~~~~~~l~~~~~~----AglP~gvv~vv~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~a~ 226 (462)
T PF00171_consen 151 LAAGNTVVLKPSEQAPLTALLLAELLEE----AGLPPGVVNVVPGDGSEVGEALVSHPDVDLVSFTGSTATGRAIAKAAA 226 (462)
T ss_dssp HHTT-EEEEEEBTTSHHHHHHHHHHHHH----HTSTTTSEEEECSSTHHHHHHHHHTTTEEEEEEESEHHHHHHHHHHHH
T ss_pred hcccccceeeeccccccccccchhhccc----cccccccccccccccccccceeeeccccceeeecchhhhhhhhhhhcc
Confidence 9999999999999999999999999987 7 99999999996 6778888999999999999999999999998773
Q ss_pred ---CCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccCchhHHHHHHHHHhcCC-------
Q 005074 503 ---IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------- 571 (715)
Q Consensus 503 ---~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~f~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~------- 571 (715)
+|+++|||||||+||++|||+|.|++.+++|+|.|+| .|++++|||||+++| |+|+++|+++++++.+
T Consensus 227 ~~~~~v~lelgG~~p~iV~~daDld~aa~~iv~~~~~~~GQ~C~a~~~v~V~~~i~-~~f~~~l~~~~~~l~~g~~~~~~ 305 (462)
T PF00171_consen 227 KNLKPVVLELGGKNPVIVDPDADLDKAAEAIVRGAFFNSGQSCTAPSRVLVHESIY-DEFVEALKERVAKLRVGDPLDES 305 (462)
T ss_dssp TTTSEEEEEECEEEEEEE-TTSHHHHHHHHHHHHHHGGGGTSTTSEEEEEEEHHHH-HHHHHHHHHHHHTSEBSSTTSTT
T ss_pred cccccccccccccceeeEecccccccccccccchhccccccccccccccccccccc-chhhhhhhhccccccccCCcccc
Confidence 9999999999999999999999999999999999987 999999999999999 7999999999987621
Q ss_pred ---------------------------eE-ecCc-----cccccc--c-C-----CCCCCccccccCceEEEEEeCCHHH
Q 005074 572 ---------------------------GL-FGGP-----RASKLL--Q-I-----PETRLFHHEYNSMVCTVEIVDDVRA 610 (715)
Q Consensus 572 ---------------------------~~-~g~~-----~~~~~~--p-v-----~~~~~~~eE~FGPVl~v~~~~~~de 610 (715)
++ .|+. ...+++ | | ++|++++||+||||++|++|+|+||
T Consensus 306 ~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~e 385 (462)
T PF00171_consen 306 TDVGPLISKAQRERVKALIEDAVAEGAKVLCGGEPQEADPENGFFIPPTVLEDVPPDMPIMQEEIFGPVLPVVPYDDLDE 385 (462)
T ss_dssp CSBCHCSSHHHHHHHHHHHHHHHHTTSEEEEETSSSSBCSSSSTEEEEEEEESEHTTSHHHHSC-SSSEEEEEEESSHHH
T ss_pred ccccccccchhhhhcccccccccccccccccccccccccccccccccccccccccccccccccccccccceecccccchh
Confidence 12 2331 111222 5 2 4689999999999999999999999
Q ss_pred HHHHHHhcCCCceeEEEecCHHHHHHHHHhcCcceEEEcCCCCCCCC-CccCCcccccccccccccccccccccceEEEE
Q 005074 611 AIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDG-ARFGLGAEVGISTSRIHARGPVGVEGLLTTRW 689 (715)
Q Consensus 611 Ai~~aN~~~~GL~a~i~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~~-~pfG~g~~sG~~~~~~~~~g~~gl~~ft~~K~ 689 (715)
||+++|+++|||++||||+|.++++++++++++|+|+||+++..... +||||.+.||+| +++|++|+++||+.|+
T Consensus 386 ai~~~n~~~~gl~a~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~~~SG~G----~~~g~~~l~~~~~~k~ 461 (462)
T PF00171_consen 386 AIALANDSEYGLTASVFSRDESRAERLARRLEAGRVWINDPPTGDPDGLPFGGFKQSGIG----REGGPEGLDEFTQIKT 461 (462)
T ss_dssp HHHHHHHSSEESEEEEECSBHHHHHHHHHHSTSSEEEESSSSTGGTTSSEBE-SGGGEES----EBSHHHHHHGTEEEEE
T ss_pred hhhcccccCCCceeEEecccccccccccccccccceeecCCcccccccCCCCCcccccCC----cchHHHHHHHhCCccC
Confidence 99999999999999999999999999999999999999998766544 599999999986 3569999999999998
Q ss_pred E
Q 005074 690 I 690 (715)
Q Consensus 690 v 690 (715)
|
T Consensus 462 V 462 (462)
T PF00171_consen 462 V 462 (462)
T ss_dssp E
T ss_pred C
Confidence 6
No 92
>cd07137 ALDH_F3FHI Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins. Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress.
Probab=100.00 E-value=1.2e-70 Score=610.03 Aligned_cols=379 Identities=21% Similarity=0.231 Sum_probs=310.9
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhhchhHHHHHHhhcChhHHHHHHHHHHHH
Q 005074 295 EMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRIL 374 (715)
Q Consensus 295 ~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~~ 374 (715)
+++++|++||+.|+.++.++|.++|++++++|++|+|+|++++++|++++. .++...++....+.+++++..++.+
T Consensus 3 ~a~~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~----~~a~~~ev~~~~~~~~~~~~~~~~~ 78 (432)
T cd07137 3 RLVRELRETFRSGRTRSAEWRKSQLKGLLRLVDENEDDIFAALRQDLGKPS----AESFRDEVSVLVSSCKLAIKELKKW 78 (432)
T ss_pred HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCH----HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 588999999999999999999999999999999999999999998876653 2332223333333444444444332
Q ss_pred hcccccccccccccccCCCeEEEEeeeceeEEEEEcCC-Chh-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHH
Q 005074 375 ADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITS 452 (715)
Q Consensus 375 ~~~~~~~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGN~vvlKps~~tp~t~~~l~~~~~~ 452 (715)
.+ +.....+... .....+++|+|+|||++|+|| ||. +.+++++|||++||+||+|||+.||+|+..+++++.+
T Consensus 79 ~~---~~~~~~~~~~--~~~~~~~~r~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~tp~~~~~l~~~~~~ 153 (432)
T cd07137 79 MA---PEKVKTPLTT--FPAKAEIVSEPLGVVLVISAWNFPFLLSLEPVIGAIAAGNAVVLKPSELAPATSALLAKLIPE 153 (432)
T ss_pred hC---CcccCCCccc--CCceeEEEEecCcEEEEEcCCchHHHHHHHHHHHHHhcCCEEEEECCCcChHHHHHHHHHHHH
Confidence 21 1010011101 122457789999999999998 585 5779999999999999999999999999999999986
Q ss_pred hcccccCcCceEEecCcchhhHhhcCCCCccEEEeecCHHHHHHHHhhc---CCCEEEecCCcceEEEcCCCCHHHHHHH
Q 005074 453 AIPDTVGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST---KIPVLGHADGICHVYVDKSANLDVAKNI 529 (715)
Q Consensus 453 al~~alP~gvv~vv~~~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a---~~~~~lElGGk~p~iV~~dADl~~A~~~ 529 (715)
++|+|++|+|+++.+.++.|..| ++|+|+||||+++|++|++.+ .||+++|||||||+||++|||+|.|++.
T Consensus 154 ----~~P~gvv~~v~g~~~~~~~L~~~-~i~~v~fTGs~~~g~~v~~~aa~~~~~~~lElgG~np~iV~~dAdl~~aa~~ 228 (432)
T cd07137 154 ----YLDTKAIKVIEGGVPETTALLEQ-KWDKIFFTGSPRVGRIIMAAAAKHLTPVTLELGGKCPVIVDSTVDLKVAVRR 228 (432)
T ss_pred ----hCCcCeEEEEeCCHHHHHHHHhC-CCCEEEEECChHHHHHHHHHHHhcCCcEEEEccCCCcEEEcCCCCHHHHHHH
Confidence 59999999999654566666666 599999999999999998877 4999999999999999999999999999
Q ss_pred HHhhcc-CCCc-cccccceEEEcCcccCchhHHHHHHHHHhcCC--------------------------------eE-e
Q 005074 530 VIDAKI-DYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV--------------------------------GL-F 574 (715)
Q Consensus 530 iv~~~f-~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~--------------------------------~~-~ 574 (715)
+++|+| .|+| .|+|++|+|||+++| |+|+++|+++++++.. .+ .
T Consensus 229 i~~~~f~~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~g~p~~~~~~gpli~~~~~~~v~~~i~~a~~ga~~l~ 307 (432)
T cd07137 229 IAGGKWGCNNGQACIAPDYVLVEESFA-PTLIDALKNTLEKFFGENPKESKDLSRIVNSHHFQRLSRLLDDPSVADKIVH 307 (432)
T ss_pred HHHHhhhccCCCcccCCCEEEEcHHHH-HHHHHHHHHHHHHHhCCCCCccCCcCCcCCHHHHHHHHHHHHHHHhCCeEEe
Confidence 999999 4776 999999999999999 7999999998887521 11 2
Q ss_pred cCccc-ccc-c-c-C-----CCCCCccccccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEecCHHHHHHHHHhcCcce
Q 005074 575 GGPRA-SKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAA 645 (715)
Q Consensus 575 g~~~~-~~~-~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~i~t~d~~~~~~~~~~l~~G~ 645 (715)
|+... .++ + | | +++++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|.
T Consensus 308 gg~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~ 387 (432)
T cd07137 308 GGERDEKNLYIEPTILLDPPLDSSIMTEEIFGPLLPIITVKKIEESIEIINSRPKPLAAYVFTKNKELKRRIVAETSSGG 387 (432)
T ss_pred CCCcCCCCCEEeeEEEecCCCcchhhhcccccCceEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCcCc
Confidence 33221 132 3 5 2 358999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCCCCC--CCCCccCCcccccccccccccccccccccceEEEEEEE
Q 005074 646 VFHNASTRF--CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILR 692 (715)
Q Consensus 646 V~iN~~~~~--~~~~pfG~g~~sG~~~~~~~~~g~~gl~~ft~~K~v~~ 692 (715)
|+||++... .+.+||||.|.||+| +++|.+++++||+.|+|++
T Consensus 388 v~iN~~~~~~~~~~~PfGG~k~SG~G----~~~g~~~l~~f~~~k~v~~ 432 (432)
T cd07137 388 VTFNDTVVQYAIDTLPFGGVGESGFG----AYHGKFSFDAFSHKKAVLY 432 (432)
T ss_pred EEECCccccccCCCCCCCCcCcCcCC----ccccHHHHHHhccCceeeC
Confidence 999987653 367899999999986 3568999999999999864
No 93
>cd07146 ALDH_PhpJ Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like. Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD.
Probab=100.00 E-value=1.8e-70 Score=613.29 Aligned_cols=395 Identities=20% Similarity=0.212 Sum_probs=329.5
Q ss_pred HHHHcCCcceeEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhh
Q 005074 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 347 (715)
Q Consensus 268 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~ 347 (715)
.+|++|+.++++...+ .+|+++++++|+++ |+.+|.++|.++|++++++|++|+++|++++.+|.+++..
T Consensus 4 ~~P~tg~~i~~~~~~~------~~~v~~av~~A~~~---~~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~- 73 (451)
T cd07146 4 RNPYTGEVVGTVPAGT------EEALREALALAASY---RSTLTRYQRSAILNKAAALLEARREEFARLITLESGLCLK- 73 (451)
T ss_pred cCCCCCCEEEEEcCCC------HHHHHHHHHHHHHH---HhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHH-
Confidence 4688999999998888 89999999999875 9889999999999999999999999999998877655421
Q ss_pred chhHHHHHHhhcChhHHHHHHHHHHHHhcccc-cccccccccc--cCCCeEEEEeeeceeEEEEEcCC-Chh-hHHHHHH
Q 005074 348 GYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTE--LADGLILEKTSCPLGVLLIVFES-RPD-ALVQIAS 422 (715)
Q Consensus 348 g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~g~~~~~~~--~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~ 422 (715)
++ ..|+..+++.++++++... ..++..+... ...+...+++++|+|||++|+|| +|. +.+++++
T Consensus 74 ---~a--------~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~ 142 (451)
T cd07146 74 ---DT--------RYEVGRAADVLRFAAAEALRDDGESFSCDLTANGKARKIFTLREPLGVVLAITPFNHPLNQVAHKIA 142 (451)
T ss_pred ---HH--------HHHHHHHHHHHHHHHHHHHHhcCcccccccccCCCCceEEEEEeccceEEEEccCChHHHHHHHHHH
Confidence 22 1255566666666554221 1122211100 01234567889999999999998 585 5678999
Q ss_pred HHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-cchhhHhhcCCCCccEEEeecCHHHHHHHHhh
Q 005074 423 LAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKES 500 (715)
Q Consensus 423 ~ALaaGN~vvlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~ 500 (715)
|||++||+||+|||+.||+++..+.+++++ + +|+|++|++++ +.++++.|..||++|+|+||||+.+|+.|++.
T Consensus 143 ~ALaaGN~VilKps~~~p~~~~~l~~~l~~----aglP~g~v~~v~g~~~~~~~~l~~~~~i~~V~fTGs~~~g~~i~~~ 218 (451)
T cd07146 143 PAIAANNRIVLKPSEKTPLSAIYLADLLYE----AGLPPDMLSVVTGEPGEIGDELITHPDVDLVTFTGGVAVGKAIAAT 218 (451)
T ss_pred HHHHcCCEEEEECCCCchHHHHHHHHHHHH----cCcCccceEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHH
Confidence 999999999999999999999999999986 7 99999999995 55678888999999999999999999999887
Q ss_pred cC-CCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccCchhHHHHHHHHHhcCCe------
Q 005074 501 TK-IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGVG------ 572 (715)
Q Consensus 501 a~-~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~f~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~~------ 572 (715)
+. +|+++|||||||+||++|||++.|++.+++++|.|+| .|++++|+|||+++| |+|+++|+++++++...
T Consensus 219 a~~~~~~lElGG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~l~~g~p~~~~ 297 (451)
T cd07146 219 AGYKRQLLELGGNDPLIVMDDADLERAATLAVAGSYANSGQRCTAVKRILVHESVA-DEFVDLLVEKSAALVVGDPMDPA 297 (451)
T ss_pred hcCCceeeecCCCceEEECCCCCHHHHHHHHHHHHHhhCCCCCCCCceEEEchHHH-HHHHHHHHHHHhcCCCCCCCCCC
Confidence 74 8999999999999999999999999999999999987 999999999999999 79999999999876321
Q ss_pred ----------------------------E-ecCccccccc-c-C-----CCCCCccccccCceEEEEEeCCHHHHHHHHH
Q 005074 573 ----------------------------L-FGGPRASKLL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIH 616 (715)
Q Consensus 573 ----------------------------~-~g~~~~~~~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN 616 (715)
+ .|+.....++ | | +++++++||+||||++|++|+|+||||+++|
T Consensus 298 ~~~gpli~~~~~~~v~~~v~~a~~~Ga~vl~gg~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n 377 (451)
T cd07146 298 TDMGTVIDEEAAIQIENRVEEAIAQGARVLLGNQRQGALYAPTVLDHVPPDAELVTEETFGPVAPVIRVKDLDEAIAISN 377 (451)
T ss_pred CCcCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCCEEEcCEEeecCCCCCHHHhCCCCCCeEEEEEeCCHHHHHHHHh
Confidence 1 1221111122 5 2 3578999999999999999999999999999
Q ss_pred hcCCCceeEEEecCHHHHHHHHHhcCcceEEEcCCCCC-CCCCccCCcccccccccccccccccccccceEEEEEE
Q 005074 617 QHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRF-CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 691 (715)
Q Consensus 617 ~~~~GL~a~i~t~d~~~~~~~~~~l~~G~V~iN~~~~~-~~~~pfG~g~~sG~~~~~~~~~g~~gl~~ft~~K~v~ 691 (715)
+++|||++||||+|.+++++|++++++|+|+||+.+.. .+..||||.|.||++ ++++|++|+++||+.|++.
T Consensus 378 ~~~~gL~~~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~~---g~~~g~~~~~~f~~~k~~~ 450 (451)
T cd07146 378 STAYGLSSGVCTNDLDTIKRLVERLDVGTVNVNEVPGFRSELSPFGGVKDSGLG---GKEGVREAMKEMTNVKTYS 450 (451)
T ss_pred CCCCCceEEEECCCHHHHHHHHHHCCcceEEECCCCCCCCCCCCcCcccccCCC---cccChHHHHHHHhceeEEe
Confidence 99999999999999999999999999999999986544 356899999999863 1356899999999999985
No 94
>cd07132 ALDH_F3AB Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins. NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes.
Probab=100.00 E-value=2.1e-70 Score=610.52 Aligned_cols=381 Identities=20% Similarity=0.210 Sum_probs=319.9
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhhchhHHHHHHhhcChhHHHHHHHHHHHH
Q 005074 295 EMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRIL 374 (715)
Q Consensus 295 ~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~~ 374 (715)
+|+++|++||+.|+++|..+|.++|++++++|++|+++|++++++|++++.. ++...++..+..+++++++.++++
T Consensus 2 ~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~----~a~~~ev~~~~~~~~~~~~~~~~~ 77 (443)
T cd07132 2 EAVRRAREAFSSGKTRPLEFRIQQLEALLRMLEENEDEIVEALAKDLRKPKF----EAVLSEILLVKNEIKYAISNLPEW 77 (443)
T ss_pred hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHH----HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5789999999999999999999999999999999999999999988876532 333345555667788888888777
Q ss_pred hcccccccccccccccCCCeEEEEeeeceeEEEEEcCC-Chh-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHH
Q 005074 375 ADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITS 452 (715)
Q Consensus 375 ~~~~~~~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGN~vvlKps~~tp~t~~~l~~~~~~ 452 (715)
.....+ ..... ..+...++.++|+|||++|+|| +|. +.++++++||++||+||+|||+.+|.|+..+++++++
T Consensus 78 ~~~~~~-~~~~~----~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~l~~~~~~ 152 (443)
T cd07132 78 MKPEPV-KKNLA----TLLDDVYIYKEPLGVVLIIGAWNYPLQLTLVPLVGAIAAGNCVVIKPSEVSPATAKLLAELIPK 152 (443)
T ss_pred hCCccC-CCccc----cCCCceEEEEecccEEEEEcCCchhHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHH
Confidence 532111 11100 0122357889999999999998 685 6789999999999999999999999999999999986
Q ss_pred hcccccCcCceEEecC-cchhhHhhcCCCCccEEEeecCHHHHHHHHhhc---CCCEEEecCCcceEEEcCCCCHHHHHH
Q 005074 453 AIPDTVGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST---KIPVLGHADGICHVYVDKSANLDVAKN 528 (715)
Q Consensus 453 al~~alP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a---~~~~~lElGGk~p~iV~~dADl~~A~~ 528 (715)
++|+|++|++++ .++...++ + ++||+|+||||+++|+.|++.+ .||+++|||||||+||++|||+|.|++
T Consensus 153 ----~lp~gv~~vv~g~~~~~~~l~-~-~~vd~V~fTGs~~~g~~i~~~a~~~~~~~~lElgG~~p~iV~~dADl~~aa~ 226 (443)
T cd07132 153 ----YLDKECYPVVLGGVEETTELL-K-QRFDYIFYTGSTSVGKIVMQAAAKHLTPVTLELGGKSPCYVDKSCDIDVAAR 226 (443)
T ss_pred ----hCCcCeEEEEeCCHHHHHHHH-h-CCCCEEEEECChHHHHHHHHHHHhhCCceEEEcCCCCceEEcCCCCHHHHHH
Confidence 599999999995 44445544 4 4899999999999999998876 399999999999999999999999999
Q ss_pred HHHhhccCCCc-cccccceEEEcCcccCchhHHHHHHHHHhcCCe-----------------------------EecCcc
Q 005074 529 IVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGVG-----------------------------LFGGPR 578 (715)
Q Consensus 529 ~iv~~~f~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~~-----------------------------~~g~~~ 578 (715)
.+++++|.|+| +|+|++|+|||+++| |+|+++|+++++++... +.|+..
T Consensus 227 ~i~~~~f~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~v~~~i~~a~~~~gg~~ 305 (443)
T cd07132 227 RIAWGKFINAGQTCIAPDYVLCTPEVQ-EKFVEALKKTLKEFYGEDPKESPDYGRIINDRHFQRLKKLLSGGKVAIGGQT 305 (443)
T ss_pred HHHHHHHhcCCCceeCCcEEEEcHHHH-HHHHHHHHHHHHHhcCCCCCcccccCCcCCHHHHHHHHHHHhCCEEEeCCcc
Confidence 99999999986 999999999999999 79999999988765210 123322
Q ss_pred c-cc-cc-c-C-----CCCCCccccccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEecCHHHHHHHHHhcCcceEEEc
Q 005074 579 A-SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHN 649 (715)
Q Consensus 579 ~-~~-~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~i~t~d~~~~~~~~~~l~~G~V~iN 649 (715)
. .+ ++ | | +++++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.++++++++|+|+||
T Consensus 306 ~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~an~~~~gL~a~i~t~d~~~~~~~~~~l~~G~v~IN 385 (443)
T cd07132 306 DEKERYIAPTVLTDVKPSDPVMQEEIFGPILPIVTVNNLDEAIEFINSREKPLALYVFSNNKKVINKILSNTSSGGVCVN 385 (443)
T ss_pred CCCCCEEeeEEEeCCCCCChHHhccccCceeEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCcceEEEC
Confidence 1 12 33 5 2 3688999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCC--CCCCccCCcccccccccccccccccccccceEEEEEEEcCc
Q 005074 650 ASTRF--CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNG 695 (715)
Q Consensus 650 ~~~~~--~~~~pfG~g~~sG~~~~~~~~~g~~gl~~ft~~K~v~~~~~ 695 (715)
+.... .+.+||||.|+||+| +++|.+|+++|++.|++++++.
T Consensus 386 ~~~~~~~~~~~PfGG~k~SG~G----~~~g~~~l~~~~~~k~v~~~~~ 429 (443)
T cd07132 386 DTIMHYTLDSLPFGGVGNSGMG----AYHGKYSFDTFSHKRSCLVKSL 429 (443)
T ss_pred CcccccCCCCCCCCCCCcccCC----CcccHHHHHHhccccEEEEccc
Confidence 87643 356899999999986 3569999999999999988753
No 95
>cd07133 ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-like. Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD.
Probab=100.00 E-value=1.9e-70 Score=609.87 Aligned_cols=379 Identities=17% Similarity=0.168 Sum_probs=311.4
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhhchhHHHHHHhhcChhHHHHHHHHHHHH
Q 005074 295 EMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRIL 374 (715)
Q Consensus 295 ~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~~ 374 (715)
+.+++|++||+.|+++|+.+|.++|++++++|++|+++|++++++|+++.. ..++...++....+.++++++.++.+
T Consensus 2 ~~~~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~---~~ea~~~ev~~~i~~~~~~~~~~~~~ 78 (434)
T cd07133 2 ALLERQKAAFLANPPPSLEERRDRLDRLKALLLDNQDALAEAISADFGHRS---RHETLLAEILPSIAGIKHARKHLKKW 78 (434)
T ss_pred hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC---hHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 357889999999999999999999999999999999999999998876520 01222222222333444444444433
Q ss_pred hcccccccccccccccCCCeEEEEeeeceeEEEEEcCC-Chh-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHH
Q 005074 375 ADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITS 452 (715)
Q Consensus 375 ~~~~~~~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGN~vvlKps~~tp~t~~~l~~~~~~ 452 (715)
.+. ........ . .+...+++++|+|||++|+|| ||. +++++++|||++||+||+|||+.+|.++..+++++++
T Consensus 79 ~~~---~~~~~~~~-~-~~~~~~~~~~P~Gvv~~I~pwN~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~l~~~ 153 (434)
T cd07133 79 MKP---SRRHVGLL-F-LPAKAEVEYQPLGVVGIIVPWNYPLYLALGPLIAALAAGNRVMIKPSEFTPRTSALLAELLAE 153 (434)
T ss_pred hCC---cccCCccc-c-CCCceEEEEecccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHH
Confidence 211 11000100 0 123457889999999999998 685 6789999999999999999999999999999999986
Q ss_pred hcccccCcCceEEecCcchhhHhhcCCCCccEEEeecCHHHHHHHHhhc---CCCEEEecCCcceEEEcCCCCHHHHHHH
Q 005074 453 AIPDTVGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST---KIPVLGHADGICHVYVDKSANLDVAKNI 529 (715)
Q Consensus 453 al~~alP~gvv~vv~~~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a---~~~~~lElGGk~p~iV~~dADl~~A~~~ 529 (715)
++|+|+||+|+++.++++.|.+|+ +|+|+||||+.+|+.|++.+ .||+++|||||||+||++|||++.|++.
T Consensus 154 ----alP~g~~~~v~g~~~~~~~l~~~~-v~~V~ftGs~~~g~~v~~~aa~~~~~~~lElgGk~~~iV~~dadl~~aa~~ 228 (434)
T cd07133 154 ----YFDEDEVAVVTGGADVAAAFSSLP-FDHLLFTGSTAVGRHVMRAAAENLTPVTLELGGKSPAIIAPDADLAKAAER 228 (434)
T ss_pred ----hCCcCeEEEEeCChHHHHHHHhCC-CCEEEEeCchHHHHHHHHHHHhcCceEEEEccCCCcEEEeCCCCHHHHHHH
Confidence 499999999997556778887776 99999999999999999877 3899999999999999999999999999
Q ss_pred HHhhccCCCc-cccccceEEEcCcccCchhHHHHHHHHHhcC--------------------------------CeEe-c
Q 005074 530 VIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEG--------------------------------VGLF-G 575 (715)
Q Consensus 530 iv~~~f~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~--------------------------------~~~~-g 575 (715)
+++++|.|+| .|+|++|+|||+++| |+|+++|+++++++. .++. |
T Consensus 229 i~~~~~~~~GQ~C~a~~rv~V~~~i~-~~f~~~l~~~~~~~~~g~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~g 307 (434)
T cd07133 229 IAFGKLLNAGQTCVAPDYVLVPEDKL-EEFVAAAKAAVAKMYPTLADNPDYTSIINERHYARLQGLLEDARAKGARVIEL 307 (434)
T ss_pred HHHHHhccCCCcccCCCEEEEcHHHH-HHHHHHHHHHHHHhcCCCCCCCCcCCCCCHHHHHHHHHHHHHHHhCCCEEEec
Confidence 9999999987 999999999999999 799999999987642 1222 3
Q ss_pred Cccc----cc-cc-c-C-----CCCCCccccccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEecCHHHHHHHHHhcCc
Q 005074 576 GPRA----SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDS 643 (715)
Q Consensus 576 ~~~~----~~-~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~i~t~d~~~~~~~~~~l~~ 643 (715)
+... .+ ++ | | +++++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++
T Consensus 308 g~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~~ 387 (434)
T cd07133 308 NPAGEDFAATRKLPPTLVLNVTDDMRVMQEEIFGPILPILTYDSLDEAIDYINARPRPLALYYFGEDKAEQDRVLRRTHS 387 (434)
T ss_pred CCCCcCCCCCcEEeeEEEeCCCCCCcccccccCCCeeEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCc
Confidence 3221 12 33 5 2 3689999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEcCCCC--CCCCCccCCcccccccccccccccccccccceEEEEEE
Q 005074 644 AAVFHNASTR--FCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 691 (715)
Q Consensus 644 G~V~iN~~~~--~~~~~pfG~g~~sG~~~~~~~~~g~~gl~~ft~~K~v~ 691 (715)
|.|+||++.. ..+.+||||.+.||+| +++|.+|+++||+.|+|+
T Consensus 388 G~v~iN~~~~~~~~~~~PfGG~k~SG~G----~~~g~~~~~~ft~~k~v~ 433 (434)
T cd07133 388 GGVTINDTLLHVAQDDLPFGGVGASGMG----AYHGKEGFLTFSHAKPVF 433 (434)
T ss_pred ceEEECCcccccCCCCCCcCCCCcccCC----CcCCHHHHHHhcccceec
Confidence 9999998753 2367899999999986 356999999999999874
No 96
>KOG2456 consensus Aldehyde dehydrogenase [Energy production and conversion]
Probab=100.00 E-value=6.6e-71 Score=565.12 Aligned_cols=383 Identities=21% Similarity=0.243 Sum_probs=332.0
Q ss_pred hHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhhchhHHHHHHhhcChhHHHHHHHHH
Q 005074 292 GAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSI 371 (715)
Q Consensus 292 ~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~ 371 (715)
.+++.++++|.+|.+.++.|.+.|.+.|+++...+++|+++|.+++.+|+.+.+. +++..++....++++++++.+
T Consensus 3 ~~~~~v~~~R~~F~sGrtr~~efR~~QL~~L~r~i~e~e~~i~~Al~~DL~k~~~----es~~~Ev~~~~~~i~~~l~~L 78 (477)
T KOG2456|consen 3 AISETVRRLRLAFSSGRTRPLEFRKQQLEALYRMIQENEKEIIEALAADLHKPEL----ESYLNEVGYVLNEIRYALENL 78 (477)
T ss_pred cHHHHHHHHHHHHhcCCcCChHHHHHHHHHHHHHHHhhHHHHHHHHHHHhccchh----HHHHHHHHHHHHHHHHHHHhh
Confidence 3556689999999999999999999999999999999999999999999987654 566677888889999999999
Q ss_pred HHHhcccccccccccccccCCCeEEEEeeeceeEEEEEcCC-Ch-hhHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHH
Q 005074 372 RILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RP-DALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKV 449 (715)
Q Consensus 372 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P-~~~~~~~~~ALaaGN~vvlKps~~tp~t~~~l~~~ 449 (715)
+.|....+.... .. +. -.+.+++.+|+|||++|+|| || ++++.++++|||||||||+||||.+|.++..++++
T Consensus 79 ~~wv~~~~v~~~-~~--t~--~dk~~I~~~p~GvVLiI~~wNyP~~L~l~PligAiAAGN~VVlKPSEls~n~a~~lakl 153 (477)
T KOG2456|consen 79 PEWVKPEPVKKS-FL--TF--LDKAYIEKEPLGVVLIIGPWNYPLNLTLVPLIGAIAAGNAVVLKPSELSPNTAKLLAKL 153 (477)
T ss_pred HHhccccccCcc-cc--cc--cCceeEEecCCceEEEEccCCCcceeehhhhhhhhhcCCEEEechhhcChhHHHHHHHH
Confidence 999864322111 11 11 12457889999999999999 68 47789999999999999999999999999999999
Q ss_pred HHHhcccccCcCceEEecC-cchhhHhhcCCCCccEEEeecCHHHHHHHHhhcC---CCEEEecCCcceEEEcCCCCHHH
Q 005074 450 ITSAIPDTVGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK---IPVLGHADGICHVYVDKSANLDV 525 (715)
Q Consensus 450 ~~~al~~alP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a~---~~~~lElGGk~p~iV~~dADl~~ 525 (715)
+-+ +|+++.+.||.| .++++++|.+ ++|+|+||||+.+||+||.+|+ +||+||||||+|++|++|+|++-
T Consensus 154 lp~----Yld~~~~~VV~Ggv~ETt~LL~~--rfD~IfyTGsp~VgkIim~aAaKhLTPvtLELGGKsP~~vd~~~d~~i 227 (477)
T KOG2456|consen 154 LPQ----YLDQDLIRVVNGGVPETTELLKQ--RFDHIFYTGSPRVGKIIMAAAAKHLTPVTLELGGKSPCYVDKNCDLKI 227 (477)
T ss_pred HHH----hcCcceEEEecCCCchHHHHHHh--hccEEEecCCchHHHHHHHHHHhcCCcEEEEcCCCCCeeecCCcCHHH
Confidence 986 599999999995 6788999874 7999999999999999998874 89999999999999999999999
Q ss_pred HHHHHHhhccCCCc-cccccceEEEcCcccCchhHHHHHHHHHhc-CC----------------------------e-Ee
Q 005074 526 AKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHE-GV----------------------------G-LF 574 (715)
Q Consensus 526 A~~~iv~~~f~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~-~~----------------------------~-~~ 574 (715)
|+++|+||++.|+| +|+|+++++++.+++ ++++.+++..+++. |- + ..
T Consensus 228 a~~RI~~gk~~N~GQtCvapDYiL~~k~~~-~kli~alk~~l~eFYG~n~~eS~d~sRiIn~~hf~Rl~~ll~~~~kv~~ 306 (477)
T KOG2456|consen 228 AARRIAWGKWMNSGQTCVAPDYILCSKSIQ-PKLIDALKSTLKEFYGENPKESKDLSRIINQRHFQRLSALLDETGKVAI 306 (477)
T ss_pred HHHHHHHHhhccCCCeeccCCeEEecHhhh-HHHHHHHHHHHHHHhCCCccccccHHHHhhHHHHHHHHHHhcCCCceec
Confidence 99999999999987 999999999999999 89999999888764 11 0 11
Q ss_pred cCccc--cccc-c-C----C-CCCCccccccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEecCHHHHHHHHHhcCcce
Q 005074 575 GGPRA--SKLL-Q-I----P-ETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAA 645 (715)
Q Consensus 575 g~~~~--~~~~-p-v----~-~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~i~t~d~~~~~~~~~~l~~G~ 645 (715)
|++.. ..++ | | + ++++|+||+|||||||+.|+|+||+|+.+|+.+.+|++|+||+|.+...||.+++.+|.
T Consensus 307 Gg~~d~~d~~I~PTIL~DV~~~~p~M~eEIFGPiLPIi~v~~l~Eai~~In~~eKPLa~Y~Fs~n~~~vkr~l~~tsSGg 386 (477)
T KOG2456|consen 307 GGESDESDRYIAPTILLDVPEDSPVMQEEIFGPILPIITVQSLDEAINFINEREKPLALYIFSNNEKLVKRFLTETSSGG 386 (477)
T ss_pred CCccchhhcccCCeEEecCCCCChhhhhhhccCccceeEhhhHHHHHHHHhcCCCceEEEEecCCHHHHHHHHHhccCCC
Confidence 33221 1133 4 2 2 57999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCCCCC--CCCCccCCcccccccccccccccccccccceEEEEEEEcC
Q 005074 646 VFHNASTRF--CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGN 694 (715)
Q Consensus 646 V~iN~~~~~--~~~~pfG~g~~sG~~~~~~~~~g~~gl~~ft~~K~v~~~~ 694 (715)
|.+|+...+ ...+||||.++||+| + ++|.+|++.|++.|++..+.
T Consensus 387 vt~ND~i~H~~~~~lPFGGVG~SGmG--~--YhGK~sFdTFSH~k~~l~rs 433 (477)
T KOG2456|consen 387 VTVNDVIMHVTLDSLPFGGVGESGMG--R--YHGKFSFDTFSHEKSCLLRS 433 (477)
T ss_pred eeecceEEEEEeeccCcCCcCccccc--c--ccccccccccccchhhhhcc
Confidence 999997653 577999999999986 3 56999999999999987653
No 97
>cd07149 ALDH_y4uC Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1. Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD.
Probab=100.00 E-value=5.3e-70 Score=612.63 Aligned_cols=397 Identities=19% Similarity=0.268 Sum_probs=333.1
Q ss_pred HHHHcCCcceeEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhh
Q 005074 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 347 (715)
Q Consensus 268 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~ 347 (715)
.+|.+|+.++++...+ .+++++++++|++||+.|+++|.++|.++|++++++|++++++|++++.+|.+++..
T Consensus 4 ~~P~tg~~~~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~- 76 (453)
T cd07149 4 ISPYDGEVIGRVPVAS------EEDVEKAIAAAKEGAKEMKSLPAYERAEILERAAQLLEERREEFARTIALEAGKPIK- 76 (453)
T ss_pred cCCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCHH-
Confidence 4678899999998888 899999999999999999999999999999999999999999999998877655432
Q ss_pred chhHHHHHHhhcChhHHHHHHHHHHHHhcccc-ccccccccccc--CCCeEEEEeeeceeEEEEEcCC-Chh-hHHHHHH
Q 005074 348 GYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTEL--ADGLILEKTSCPLGVLLIVFES-RPD-ALVQIAS 422 (715)
Q Consensus 348 g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~g~~~~~~~~--~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~ 422 (715)
++. .|+..+++.++++++..+ ..++..+.... ..+...+.+++|+|||++|+|| +|. +.+++++
T Consensus 77 ---~a~--------~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~ 145 (453)
T cd07149 77 ---DAR--------KEVDRAIETLRLSAEEAKRLAGETIPFDASPGGEGRIGFTIREPIGVVAAITPFNFPLNLVAHKVG 145 (453)
T ss_pred ---HHH--------HHHHHHHHHHHHHHHHHHHhcCccccccccCCCCCeeEEEEeecceEEEEECCCCChHHHHHHHHH
Confidence 221 244455555554443221 11222111000 1133457889999999999998 585 5679999
Q ss_pred HHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-cchhhHhhcCCCCccEEEeecCHHHHHHHHhh
Q 005074 423 LAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKES 500 (715)
Q Consensus 423 ~ALaaGN~vvlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~ 500 (715)
+||++||+||+|||+.+|.++..+++++++ + +|+|++|+|++ +.+++..|..||++|+|+||||+++|+.|++.
T Consensus 146 ~ALaaGN~VI~Kps~~~p~~~~~l~~~l~~----ag~P~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~ 221 (453)
T cd07149 146 PAIAAGNAVVLKPASQTPLSALKLAELLLE----AGLPKGALNVVTGSGETVGDALVTDPRVRMISFTGSPAVGEAIARK 221 (453)
T ss_pred HHHHcCCEEEEECCCcchHHHHHHHHHHHH----cCcCccceEEeecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHH
Confidence 999999999999999999999999999987 7 99999999995 55668888899999999999999999999988
Q ss_pred cC-CCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccCchhHHHHHHHHHhcCCe------
Q 005074 501 TK-IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGVG------ 572 (715)
Q Consensus 501 a~-~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~f~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~~------ 572 (715)
+. +|+++|||||||+||++|||++.|++.+++++|.|+| .|++++|+|||+++| |+|+++|+++++++...
T Consensus 222 a~~~~~~lelGGk~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~-d~f~~~L~~~~~~~~~g~p~~~~ 300 (453)
T cd07149 222 AGLKKVTLELGSNAAVIVDADADLEKAVERCVSGAFANAGQVCISVQRIFVHEDIY-DEFLERFVAATKKLVVGDPLDED 300 (453)
T ss_pred cCCCceeeecCCCceEEECCCCCHHHHHHHHHHHHHHhcCCCCCCCceEEEcHhHH-HHHHHHHHHHHHhCCcCCCCCCC
Confidence 75 8999999999999999999999999999999999986 999999999999999 79999999998876321
Q ss_pred ----------------------------E-ecCccccccc-c-C-----CCCCCccccccCceEEEEEeCCHHHHHHHHH
Q 005074 573 ----------------------------L-FGGPRASKLL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIH 616 (715)
Q Consensus 573 ----------------------------~-~g~~~~~~~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN 616 (715)
+ .|+.....++ | | +++++++||+||||++|++|+|+||||+++|
T Consensus 301 ~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n 380 (453)
T cd07149 301 TDVGPMISEAEAERIEEWVEEAVEGGARLLTGGKRDGAILEPTVLTDVPPDMKVVCEEVFAPVVSLNPFDTLDEAIAMAN 380 (453)
T ss_pred CccccccCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCeEEcCEEEeCCCCCCHHHhCCCCCceEEEEEeCCHHHHHHHHh
Confidence 1 1221111123 5 2 3578999999999999999999999999999
Q ss_pred hcCCCceeEEEecCHHHHHHHHHhcCcceEEEcCCCCC-CCCCccCCcccccccccccccccccccccceEEEEEE
Q 005074 617 QHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRF-CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 691 (715)
Q Consensus 617 ~~~~GL~a~i~t~d~~~~~~~~~~l~~G~V~iN~~~~~-~~~~pfG~g~~sG~~~~~~~~~g~~gl~~ft~~K~v~ 691 (715)
+++|||++||||+|.++++++++++++|.|+||+++.. .+..||||.|.||+| +++|++|+++||+.|+|.
T Consensus 381 ~~~~gLt~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfGG~~~SG~G----~~~g~~~~~~~~~~k~~~ 452 (453)
T cd07149 381 DSPYGLQAGVFTNDLQKALKAARELEVGGVMINDSSTFRVDHMPYGGVKESGTG----REGPRYAIEEMTEIKLVC 452 (453)
T ss_pred CCCcCceEEEEcCCHHHHHHHHHHcCcCeEEECCCCCCCCCCCCcCCccccccC----CCChHHHHHHhhceeEEe
Confidence 99999999999999999999999999999999987654 467899999999986 356999999999999985
No 98
>PRK15398 aldehyde dehydrogenase EutE; Provisional
Probab=100.00 E-value=2.7e-70 Score=609.75 Aligned_cols=378 Identities=18% Similarity=0.208 Sum_probs=309.3
Q ss_pred HhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhhchhHHHHHHhhcChhHHHHHHH
Q 005074 290 QVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAK 369 (715)
Q Consensus 290 ~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~i~~~~~ 369 (715)
.+|+++++++|++||++|+.+|.++|.++|++++++|++|+++|++++.+|++++. .++.. ..+.+.++
T Consensus 35 ~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~la~~l~~~~~ela~~~~~E~Gk~~----~ea~~-------~~~~~~~~ 103 (465)
T PRK15398 35 FASVDDAVAAAKVAQQRYQQKSLAMRQRIIDAIREALLPHAEELAELAVEETGMGR----VEDKI-------AKNVAAAE 103 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCc----HHHHH-------HHHHHHHH
Confidence 67999999999999999999999999999999999999999999999887765432 12211 12222222
Q ss_pred HHHHHhcccccccccccccccCCCeEEEEeeeceeEEEEEcCC-Chh-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHH
Q 005074 370 SIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILH 447 (715)
Q Consensus 370 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGN~vvlKps~~tp~t~~~l~ 447 (715)
.++ +.....+.... ..+...+++++|+|||++|+|| ||. ++++++++||++||+||+|||+.||+|+..++
T Consensus 104 ~~~---~~~~~~~~~~~----~~~~~~~v~~~P~GVV~~I~PwN~P~~~~~~~ia~ALaaGN~VVlKps~~tp~t~~~l~ 176 (465)
T PRK15398 104 KTP---GVEDLTTEALT----GDNGLTLIEYAPFGVIGAVTPSTNPTETIINNAISMLAAGNSVVFSPHPGAKKVSLRAI 176 (465)
T ss_pred Hhc---cccccccCccc----CCCceeEEEecccEEEEEeeCCCCchHHHHHHHHHHHHhCCcEEEECCccchHHHHHHH
Confidence 211 00000011111 1123457788999999999998 685 67799999999999999999999999999999
Q ss_pred HHHHHhcccc-cCcCceEEecC-cchhhHhhcCCCCccEEEeecCHHHHHHHHhhcCCCEEEecCCcceEEEcCCCCHHH
Q 005074 448 KVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDV 525 (715)
Q Consensus 448 ~~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a~~~~~lElGGk~p~iV~~dADl~~ 525 (715)
+++++++.++ +|+|++|+|++ +.++++.|.+||+||+|+||||+++|+.|++ +++|+++|||||||+||++|||||+
T Consensus 177 ~ll~~~l~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGS~~~G~~v~~-~~k~~~~elGGk~p~IV~~dADld~ 255 (465)
T PRK15398 177 ELLNEAIVAAGGPENLVVTVAEPTIETAQRLMKHPGIALLVVTGGPAVVKAAMK-SGKKAIGAGAGNPPVVVDETADIEK 255 (465)
T ss_pred HHHHHHHHHcCCCCCeEEEecCCCHHHHHHHHcCCCccEEEeeCCHHHHHHHHH-cCCceeeecCCCceEEEecCCCHHH
Confidence 9999888889 99999999985 5567788888999999999999999999988 6799999999999999999999999
Q ss_pred HHHHHHhhccCCCc-cccccceEEEcCcccCchhHHHHHHH------------HHhc----C--C-e-EecCcc--c---
Q 005074 526 AKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVE------------LQHE----G--V-G-LFGGPR--A--- 579 (715)
Q Consensus 526 A~~~iv~~~f~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~------------~~~~----~--~-~-~~g~~~--~--- 579 (715)
|++.++||+|.|+| +|+|++|+|||++|| |+|+++|+++ +.++ + . + +.|+.. .
T Consensus 256 Aa~~i~~g~~~n~GQ~C~A~~rvlV~~si~-d~f~~~l~~~~~~li~~~~~~~v~~~l~~~~~~~~~~~~g~~~~~i~~~ 334 (465)
T PRK15398 256 AARDIVKGASFDNNLPCIAEKEVIVVDSVA-DELMRLMEKNGAVLLTAEQAEKLQKVVLKNGGTVNKKWVGKDAAKILEA 334 (465)
T ss_pred HHHHHHHhcccCCCCcCCCCceEEEeHHHH-HHHHHHHHHcCCccCCHHHHHHHHHHHhhcccccchhhhCCCHHHHHHh
Confidence 99999999999987 999999999999999 7999999883 2211 1 0 1 112211 0
Q ss_pred cc-cc----c-C-----CCCCCccccccCceEEEEEeCCHHHHHHHHHhcCCCc--eeEEEecCHHHHHHHHHhcCcceE
Q 005074 580 SK-LL----Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAH--TDCIVAEDQKVAETFLCQVDSAAV 646 (715)
Q Consensus 580 ~~-~~----p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL--~a~i~t~d~~~~~~~~~~l~~G~V 646 (715)
.+ ++ | | ++|++|+||+|||||+|++|+|+||||+++|+++||| ++||||+|.+++++|++++++|+|
T Consensus 335 ~G~~~~~~~~tvl~~v~~d~~i~~eE~FGPVl~V~~~~d~deAi~~aN~~~yGL~hs~~IfT~d~~~a~~~a~~l~~G~V 414 (465)
T PRK15398 335 AGINVPKDTRLLIVETDANHPFVVTELMMPVLPVVRVKDVDEAIALAVKLEHGNRHTAIMHSRNVDNLNKMARAIQTSIF 414 (465)
T ss_pred CCCCCCCCCCEEEecCCCCCchhcccccCceEEEEEeCCHHHHHHHHHhcccCCcceEEEecCCHHHHHHHHHhCCceEE
Confidence 12 22 3 2 3689999999999999999999999999999999998 999999999999999999999999
Q ss_pred EEcCCCCCCCCCccCCcccccccccccccccccccccceEEEEEEEcCc
Q 005074 647 FHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNG 695 (715)
Q Consensus 647 ~iN~~~~~~~~~pfG~g~~sG~~~~~~~~~g~~gl~~ft~~K~v~~~~~ 695 (715)
+||.++. +.+||||.+.|.+ |.+|+.| +..|..|++.++.+
T Consensus 415 ~iN~~~~--~~~p~gg~~~s~~-----~~~~~~g-~~~~~~~~~~~~~~ 455 (465)
T PRK15398 415 VKNGPSY--AGLGLGGEGFTTF-----TIATPTG-EGVTSARTFTRRRR 455 (465)
T ss_pred EECCCCc--cccCcCCCCCcee-----eecccCC-CCccchhhhhhhee
Confidence 9998753 5689998776654 4568999 99999999887543
No 99
>cd07126 ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12), family 12: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. P5CDH is a mitochondrial enzyme involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. The P5CDH, ALDH12A1 gene, in Arabidopsis, has been identified as an osmotic-stress-inducible ALDH gene. This CD contains both Viridiplantae and Alveolata P5CDH sequences.
Probab=100.00 E-value=4.5e-70 Score=609.31 Aligned_cols=380 Identities=16% Similarity=0.163 Sum_probs=319.2
Q ss_pred HHHHHcCCcceeEEecCCcccccHhhHHHHHHHHHHHHHHH--hcCCHHHH----HHHHHHHHHHHHHC--HHHHHHHHH
Q 005074 267 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRL--QALQSQDR----RKILLDVADALEAN--ESLIKVENE 338 (715)
Q Consensus 267 l~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w--~~~~~~~R----~~~L~~~a~~l~~~--~~~l~~~~~ 338 (715)
..+|.+|+.++++..++ .+|+++|+++|++||+.| +.++..+| .++|++++++|+++ .++|+++++
T Consensus 16 ~~nP~t~~~i~~~~~a~------~~dv~~Av~aA~~A~~~W~~~~~~~~~R~l~~~~il~~~a~~l~~~~~~~~la~~~~ 89 (489)
T cd07126 16 LLDPLNGDKFISVPDTD------EDEINEFVDSLRQCPKSGLHNPLKNPERYLLYGDVSHRVAHELRKPEVEDFFARLIQ 89 (489)
T ss_pred eeCCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHhccccCCCHHHHhhhHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 36689999999999888 899999999999999998 56779999 89999999999999 499999988
Q ss_pred HHHHHHHhhchhHHHHHHhhcChhHHHHHHHHHHHHhcccc-cccccccccccCCCeEEEEeeeceeEEEEEcCC-Chh-
Q 005074 339 ADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD- 415 (715)
Q Consensus 339 ~d~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~- 415 (715)
+|+||.. .++ ..|+..+++.+++|++..+ ..+..........+...+++|+|+|||++|+|| ||.
T Consensus 90 ~e~GK~~----~~a--------~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~v~r~P~GVV~~I~PwNfP~~ 157 (489)
T cd07126 90 RVAPKSD----AQA--------LGEVVVTRKFLENFAGDQVRFLARSFNVPGDHQGQQSSGYRWPYGPVAIITPFNFPLE 157 (489)
T ss_pred HHcCCCH----HHH--------HHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCCceeEEEEecceEEEEECCCchHHH
Confidence 7665442 122 3478899999999986542 233321100111234568899999999999998 585
Q ss_pred hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-cchhhHhhcCCCCccEEEeecCHHH
Q 005074 416 ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKL 493 (715)
Q Consensus 416 ~~~~~~~~ALaaGN~vvlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGS~~~ 493 (715)
+.+++++|||++||+||+||||.||+++..+++++.+ + ||+|++|+|+| +++.+. +..|+++|+|+||||+++
T Consensus 158 l~~~~ia~ALaaGN~VVlKPSe~tp~~~~~l~~~~~~----aGlP~gv~~vv~G~~~~~~~-l~~~~~v~~V~FTGS~~v 232 (489)
T cd07126 158 IPALQLMGALFMGNKPLLKVDSKVSVVMEQFLRLLHL----CGMPATDVDLIHSDGPTMNK-ILLEANPRMTLFTGSSKV 232 (489)
T ss_pred HHHHHHHHHHHcCCEEEEECCCCCCHHHHHHHHHHHH----hCcCcCcEEEEeCCchhHHH-HhcCCCCCEEEEECCHHH
Confidence 6789999999999999999999999999999999987 7 99999999996 455555 556889999999999999
Q ss_pred HHHHHhhcCCCEEEecCCcceEEEcCCC-CHHHHHHHHHhhccCCCc-cccccceEEEcCc-ccCchhHHHHHHHHHhcC
Q 005074 494 VSQIKESTKIPVLGHADGICHVYVDKSA-NLDVAKNIVIDAKIDYPA-ACNAMETLLVHKD-LACNGALNELVVELQHEG 570 (715)
Q Consensus 494 g~~i~~~a~~~~~lElGGk~p~iV~~dA-Dl~~A~~~iv~~~f~n~g-~C~a~~rv~V~~~-i~d~~f~~~l~~~~~~~~ 570 (715)
||+|+..+++++++|+|||||+||++|| |+|.|++.+++++|.|+| +|+|++|+|||++ ++ |+|+++|+++++++.
T Consensus 233 Gr~i~~~~g~k~~lElgg~~~~IV~~Da~dld~a~~~~~~g~f~naGQ~C~a~~rv~V~~~i~~-d~f~~~l~~~~~~~~ 311 (489)
T cd07126 233 AERLALELHGKVKLEDAGFDWKILGPDVSDVDYVAWQCDQDAYACSGQKCSAQSILFAHENWVQ-AGILDKLKALAEQRK 311 (489)
T ss_pred HHHHHHHhCCCEEeecCCCCceEECCCcccHHHHHHHHHHHHHhcCCCcCCCCceEEEeCcchH-HHHHHHHHHHHHhcc
Confidence 9999988888999999999999999999 999999999999999987 9999999999999 57 699999999877542
Q ss_pred -----------------------------CeE-ecCccc------c--ccc-c-C---C--------CCCCccccccCce
Q 005074 571 -----------------------------VGL-FGGPRA------S--KLL-Q-I---P--------ETRLFHHEYNSMV 599 (715)
Q Consensus 571 -----------------------------~~~-~g~~~~------~--~~~-p-v---~--------~~~~~~eE~FGPV 599 (715)
+++ .|+... . +++ | | + +|++++||+||||
T Consensus 312 ~g~~~~Gpli~~~~~~v~~~i~~a~~~~Ga~~l~GG~~~~~~~~~~~~~~~~PTvl~~~~~~~~~~~~~~i~~eEiFGPV 391 (489)
T cd07126 312 LEDLTIGPVLTWTTERILDHVDKLLAIPGAKVLFGGKPLTNHSIPSIYGAYEPTAVFVPLEEIAIEENFELVTTEVFGPF 391 (489)
T ss_pred cCCCcCCCCcCHHHHHHHHHHHHHHhCCCCEEEeCCcccccccccCCcceecCeEEEeccccccCCCCCHHHhCCCcCCE
Confidence 122 233221 1 234 5 2 1 4789999999999
Q ss_pred EEEEEeCC--HHHHHHHHHhcCCCceeEEEecCHHHHHHHHHhcCcce--EEEcCCCCCCCC----CccCCcccccccc
Q 005074 600 CTVEIVDD--VRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAA--VFHNASTRFCDG----ARFGLGAEVGIST 670 (715)
Q Consensus 600 l~v~~~~~--~deAi~~aN~~~~GL~a~i~t~d~~~~~~~~~~l~~G~--V~iN~~~~~~~~----~pfG~g~~sG~~~ 670 (715)
++|++|+| +||||+++|+++|||++||||+|.++++++++++++|+ |+||..+...+. +||||.|.||+|+
T Consensus 392 l~V~~~~~~~~deai~~aN~~~~gL~~~vft~d~~~~~~~~~~~~~G~~~v~~n~~~~~~~~~~~~~pfgg~k~sg~g~ 470 (489)
T cd07126 392 QVVTEYKDEQLPLVLEALERMHAHLTAAVVSNDIRFLQEVLANTVNGTTYAGIRARTTGAPQNHWFGPAGDPRGAGIGT 470 (489)
T ss_pred EEEEEECCCCHHHHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCcceEEEEecCCCCCCCcccCcCCCCCCcccCCCC
Confidence 99999999 99999999999999999999999999999999999999 668887655433 8999999999864
No 100
>cd07093 ALDH_F8_HMSADH Human aldehyde dehydrogenase family 8 member A1-like. In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone.
Probab=100.00 E-value=7.9e-70 Score=611.03 Aligned_cols=395 Identities=19% Similarity=0.185 Sum_probs=334.8
Q ss_pred HHHcCCcceeEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhhc
Q 005074 269 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAG 348 (715)
Q Consensus 269 ~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~g 348 (715)
+|.||+.++++..++ .+|+++++++|++||+.|+++|.++|.++|++++++|++|+++|++++.+|++++..
T Consensus 3 ~P~t~~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~-- 74 (455)
T cd07093 3 NPATGEVLAKVPEGG------AAEVDAAVAAAKEAFPGWSRMSPAERARILHKVADLIEARADELALLESLDTGKPIT-- 74 (455)
T ss_pred CCCCCCEEEEEcCCC------HHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHH--
Confidence 578899999998888 899999999999999999999999999999999999999999999998877655421
Q ss_pred hhHHHHHHhhcChhHHHHHHHHHHHHhccccc-ccccccccccCCCeEEEEeeeceeEEEEEcCC-Chh-hHHHHHHHHH
Q 005074 349 YAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAI 425 (715)
Q Consensus 349 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~AL 425 (715)
++.. .++...++.++++++.... .+...+ .+.+...+++++|+|||++|+|| +|. +.++++++||
T Consensus 75 --~~~~-------~ev~~~i~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~AL 142 (455)
T cd07093 75 --LART-------RDIPRAAANFRFFADYILQLDGESYP---QDGGALNYVLRQPVGVAGLITPWNLPLMLLTWKIAPAL 142 (455)
T ss_pred --HHHH-------HHHHHHHHHHHHHHHhHHHhCCcccc---CCCCceEEEEEEeeeEEEEECCCChHHHHHHHHHHHHH
Confidence 1111 2455555555555432211 111111 11244567889999999999998 685 5679999999
Q ss_pred HhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-cchhhHhhcCCCCccEEEeecCHHHHHHHHhhcC-
Q 005074 426 RSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK- 502 (715)
Q Consensus 426 aaGN~vvlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a~- 502 (715)
++||+||+|||+.+|+++..+.+++++ + +|+|+||++++ +.++++.|..|+++|+|+||||+.+|+.|++++.
T Consensus 143 ~aGN~VIlkps~~~p~~~~~l~~~l~~----aglP~g~v~~v~g~~~~~~~~L~~~~~i~~V~ftGs~~~g~~v~~~aa~ 218 (455)
T cd07093 143 AFGNTVVLKPSEWTPLTAWLLAELANE----AGLPPGVVNVVHGFGPEAGAALVAHPDVDLISFTGETATGRTIMRAAAP 218 (455)
T ss_pred hcCCEEEeECCCcCcHHHHHHHHHHHh----cCCCccceEEEecCchHHHHHHhcCCCccEEEEECCHHHHHHHHHHHhh
Confidence 999999999999999999999999986 8 99999999995 5567888889999999999999999999998773
Q ss_pred --CCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccCchhHHHHHHHHHhcCC--------
Q 005074 503 --IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV-------- 571 (715)
Q Consensus 503 --~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~f~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~-------- 571 (715)
||+++|||||||+||++|||++.|++.+++++|.|+| .|++++|||||++++ |+|+++|+++++++.+
T Consensus 219 ~~~~~~lelgG~~~~iV~~dAdl~~a~~~i~~~~~~~~GQ~C~a~~~v~v~~~i~-d~f~~~l~~~~~~~~~g~p~~~~~ 297 (455)
T cd07093 219 NLKPVSLELGGKNPNIVFADADLDRAVDAAVRSSFSNNGEVCLAGSRILVQRSIY-DEFLERFVERAKALKVGDPLDPDT 297 (455)
T ss_pred cccceEeecCCCCceEECCCCCHHHHHHHHHHHHHhccCCCcCCCceEEEcHHHH-HHHHHHHHHHHHhCCCCCCCCCCC
Confidence 9999999999999999999999999999999999976 999999999999999 7999999999876521
Q ss_pred --------------------------eE-ecCccc------cc-cc-c-C-----CCCCCccccccCceEEEEEeCCHHH
Q 005074 572 --------------------------GL-FGGPRA------SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRA 610 (715)
Q Consensus 572 --------------------------~~-~g~~~~------~~-~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~de 610 (715)
++ +|+... .+ ++ | | +++++++||+||||++|++|+|+||
T Consensus 298 ~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~~~~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~e 377 (455)
T cd07093 298 EVGPLISKEHLEKVLGYVELARAEGATILTGGGRPELPDLEGGYFVEPTVITGLDNDSRVAQEEIFGPVVTVIPFDDEEE 377 (455)
T ss_pred CcCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCceECCEEEecCCCCChHHhCCCCCceEEEEeeCCHHH
Confidence 11 132211 12 23 5 2 3578999999999999999999999
Q ss_pred HHHHHHhcCCCceeEEEecCHHHHHHHHHhcCcceEEEcCCCCCCCCCccCCcccccccccccccccccccccceEEEEE
Q 005074 611 AIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWI 690 (715)
Q Consensus 611 Ai~~aN~~~~GL~a~i~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~~~pfG~g~~sG~~~~~~~~~g~~gl~~ft~~K~v 690 (715)
||+++|+++|||++||||+|.++++++++++++|+|+||++.......||||.|.||+| +++|++|+++|++.|++
T Consensus 378 ai~~~n~~~~gls~~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~G----~~~g~~~~~~~~~~k~~ 453 (455)
T cd07093 378 AIELANDTPYGLAAYVWTRDLGRAHRVARRLEAGTVWVNCWLVRDLRTPFGGVKASGIG----REGGDYSLEFYTELKNV 453 (455)
T ss_pred HHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCCccCcCC----CCchHHHHHHHhceeEE
Confidence 99999999999999999999999999999999999999998776677899999999985 24699999999999998
Q ss_pred EE
Q 005074 691 LR 692 (715)
Q Consensus 691 ~~ 692 (715)
++
T Consensus 454 ~~ 455 (455)
T cd07093 454 CI 455 (455)
T ss_pred eC
Confidence 53
No 101
>TIGR01238 D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain). This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase.
Probab=100.00 E-value=5.4e-70 Score=613.79 Aligned_cols=409 Identities=17% Similarity=0.181 Sum_probs=340.6
Q ss_pred HHHHHHHHHHcCCc--EEEEeCCC-----cchHHHHHcC-CcceeEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHH
Q 005074 242 KVNAAYCAACAGIP--VVITSGFA-----MDSIIKVLEG-KRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQ 313 (715)
Q Consensus 242 Kl~aa~~a~~~gv~--v~I~~g~~-----~~~l~~~~tg-~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~ 313 (715)
-+++++...+.++= --+++|.. .-.+.+|.|+ +.++++...+ ++||++|+++|++||+.|+++|..
T Consensus 23 ~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~nP~t~~e~i~~~~~~~------~~dv~~av~~A~~a~~~W~~~~~~ 96 (500)
T TIGR01238 23 PLEAQIHAWADKTWQAAPIIGHSYKADGEAQPVTNPADRRDIVGQVFHAN------LAHVQAAIDSAQQAFPTWNATPAK 96 (500)
T ss_pred HHHHHHHHHhcCceecCceECCEEecCCCeEEeeCCCCCCeEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHH
Confidence 34567766666641 22333332 1245789985 7899998888 899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhhchhHHHHHHhhcChhHHHHHHHHHHHHhcccccccccccccccCCC
Q 005074 314 DRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRILADMEEPIGQILKRTELADG 393 (715)
Q Consensus 314 ~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 393 (715)
+|.++|++++++|++|+++|++++.+|++++. .++ ..|+..+++.++++++..+. .. +
T Consensus 97 ~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~----~~a--------~~ev~~~i~~l~~~a~~~~~---~~-------~ 154 (500)
T TIGR01238 97 ERAAKLDRLADLLELHMPELMALCVREAGKTI----HNA--------IAEVREAVDFCRYYAKQVRD---VL-------G 154 (500)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCH----HHH--------HHHHHHHHHHHHHHHHHHHH---hc-------C
Confidence 99999999999999999999999887765432 122 24688888888888753311 00 1
Q ss_pred eEEEEeeeceeEEEEEcCC-Chh-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-c
Q 005074 394 LILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-R 469 (715)
Q Consensus 394 ~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGN~vvlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~-~ 469 (715)
...++|+|||++|+|| ||. +.++++++||++||+||+|||+.||+++..+++++.+ + ||+|++|+|++ +
T Consensus 155 ---~~~~~P~GVV~~I~pwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~----aGlP~gvv~~v~g~~ 227 (500)
T TIGR01238 155 ---EFSVESRGVFVCISPWNFPLAIFTGQISAALAAGNTVIAKPAEQTSLIAYRAVELMQE----AGFPAGTIQLLPGRG 227 (500)
T ss_pred ---ceeccCcceEEEECCCchHHHHHHHHHHHHHHcCCEEEEeCCCCccHHHHHHHHHHHH----cCCCCCceEEEecCc
Confidence 1358999999999998 685 5679999999999999999999999999999999986 7 99999999996 4
Q ss_pred chhhHhhcCCCCccEEEeecCHHHHHHHHhhcC------CCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-ccc
Q 005074 470 EEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK------IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACN 542 (715)
Q Consensus 470 ~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a~------~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~f~n~g-~C~ 542 (715)
.++++.|..||+||+|+||||+.+|+.|++.++ +|+++|||||||+||++|||+|.|++.+++|+|.|+| .|+
T Consensus 228 ~~~~~~l~~~~~v~~V~ftGs~~~g~~v~~~aa~~~~~~~~v~lElGGknp~IV~~dAdld~Aa~~i~~~~f~nsGQ~C~ 307 (500)
T TIGR01238 228 ADVGAALTSDPRIAGVAFTGSTEVAQLINQTLAQREDAPVPLIAETGGQNAMIVDSTALPEQVVRDVLRSAFDSAGQRCS 307 (500)
T ss_pred chHHHHHhcCCCcCeEEEECCHHHHHHHHHHHhhcccCCceEEEecCCcCcEEECCCCCHHHHHHHHHHHHHhcCCCCCC
Confidence 567888889999999999999999999988663 6999999999999999999999999999999999987 999
Q ss_pred ccceEEEcCcccCchhHHHHHHHHHhcCCe----------------------------------Ee----cCcc--ccc-
Q 005074 543 AMETLLVHKDLACNGALNELVVELQHEGVG----------------------------------LF----GGPR--ASK- 581 (715)
Q Consensus 543 a~~rv~V~~~i~d~~f~~~l~~~~~~~~~~----------------------------------~~----g~~~--~~~- 581 (715)
|++|||||+++| |+|+++|+++++++.+. +. ++.+ ..+
T Consensus 308 a~~rv~V~~~i~-d~f~~~L~~~~~~~~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~l~~~~~~~~~~~~~g~ 386 (500)
T TIGR01238 308 ALRVLCVQEDVA-DRVLTMIQGAMQELKVGVPHLLTTDVGPVIDAEAKQNLLAHIEHMSQTQKKIAQLTLDDSRACQHGT 386 (500)
T ss_pred CCceeEEcHhhH-HHHHHHHHHHHHhCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeeccCCCCCCCCCe
Confidence 999999999999 79999999998876321 11 0000 012
Q ss_pred cc-c-C---CCCCCccccccCceEEEEEeC--CHHHHHHHHHhcCCCceeEEEecCHHHHHHHHHhcCcceEEEcCCCCC
Q 005074 582 LL-Q-I---PETRLFHHEYNSMVCTVEIVD--DVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRF 654 (715)
Q Consensus 582 ~~-p-v---~~~~~~~eE~FGPVl~v~~~~--~~deAi~~aN~~~~GL~a~i~t~d~~~~~~~~~~l~~G~V~iN~~~~~ 654 (715)
++ | | +++.+++||+||||++|++|+ |+||||+++|+++|||++||||+|.+++.+|++++++|+|+||+....
T Consensus 387 f~~PTvl~~~~~~~~~eE~FgPvl~v~~~~~~~~deai~~~N~~~~gLs~~vfT~d~~~~~~~~~~l~~G~v~IN~~~~~ 466 (500)
T TIGR01238 387 FVAPTLFELDDIAELSEEVFGPVLHVVRYKARELDQIVDQINQTGYGLTMGVHSRIETTYRWIEKHARVGNCYVNRNQVG 466 (500)
T ss_pred eEcCEEEccCCchHhhCCCcCCEEEEEEeCCCCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhCCcceEEECCCCCC
Confidence 22 5 3 367889999999999999998 799999999999999999999999999999999999999999987653
Q ss_pred C--CCCccCCcccccccccccccccccccccceEEEE
Q 005074 655 C--DGARFGLGAEVGISTSRIHARGPVGVEGLLTTRW 689 (715)
Q Consensus 655 ~--~~~pfG~g~~sG~~~~~~~~~g~~gl~~ft~~K~ 689 (715)
. +.+||||.+.||+|. +++|++++++|++.|+
T Consensus 467 ~~~~~~PfGG~k~SG~G~---~~gg~~~~~~~~~~k~ 500 (500)
T TIGR01238 467 AVVGVQPFGGQGLSGTGP---KAGGPHYLYRLTQVQY 500 (500)
T ss_pred CCCCCCCCCccccccCCC---ccCCHHHHHHHHhhcC
Confidence 2 447999999999851 2568999999999874
No 102
>cd07082 ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11. NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants.
Probab=100.00 E-value=1.1e-69 Score=612.29 Aligned_cols=399 Identities=20% Similarity=0.231 Sum_probs=335.0
Q ss_pred HHHHHcCCcceeEEecCCcccccHhhHHHHHHHHHHHHHHHhcC-CHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
Q 005074 267 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQAL-QSQDRRKILLDVADALEANESLIKVENEADVAAAQ 345 (715)
Q Consensus 267 l~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~-~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~ 345 (715)
+.+|.+|+.++++..++ .+|+++++++|++||+.|+++ |.++|.++|++++++|++++++|++++.+|++++.
T Consensus 20 ~~~P~tg~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~ 93 (473)
T cd07082 20 VYSPIDGEVIGSVPALS------ALEILEAAETAYDAGRGWWPTMPLEERIDCLHKFADLLKENKEEVANLLMWEIGKTL 93 (473)
T ss_pred eECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcH
Confidence 36688999999998888 889999999999999999998 99999999999999999999999999988876654
Q ss_pred hhchhHHHHHHhhcChhHHHHHHHHHHHHhcccc-ccccccccccc--CCCeEEEEeeeceeEEEEEcCC-Chh-hHHHH
Q 005074 346 EAGYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTEL--ADGLILEKTSCPLGVLLIVFES-RPD-ALVQI 420 (715)
Q Consensus 346 ~~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~g~~~~~~~~--~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~ 420 (715)
. ++. .|++..++.++++++..+ ..+...+.... ..+...+++++|+|||++|+|| +|. +.+++
T Consensus 94 ~----~a~--------~ev~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~ 161 (473)
T cd07082 94 K----DAL--------KEVDRTIDYIRDTIEELKRLDGDSLPGDWFPGTKGKIAQVRREPLGVVLAIGPFNYPLNLTVSK 161 (473)
T ss_pred H----HHH--------HHHHHHHHHHHHHHHHHHHhcCCcccccccccCCCceeEEEEecceEEEEECCcCcHHHHHHHH
Confidence 3 221 134444444444433221 11222111100 1234567889999999999998 585 57799
Q ss_pred HHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-cchhhHhhcCCCCccEEEeecCHHHHHHHH
Q 005074 421 ASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIK 498 (715)
Q Consensus 421 ~~~ALaaGN~vvlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~ 498 (715)
+++||++||+||+|||+.+|.++..+++++++ + +|+|++|++++ +.++++.|..||++|+|+||||+++|+.|+
T Consensus 162 i~~AL~aGN~vilKps~~~~~~~~~l~~~l~~----aglp~~~~~vv~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~ 237 (473)
T cd07082 162 LIPALIMGNTVVFKPATQGVLLGIPLAEAFHD----AGFPKGVVNVVTGRGREIGDPLVTHGRIDVISFTGSTEVGNRLK 237 (473)
T ss_pred HHHHHHcCCEEEEECCCCCcHHHHHHHHHHHH----cCCCccceEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHH
Confidence 99999999999999999999999999999986 7 99999999995 556788888899999999999999999999
Q ss_pred hhc-CCCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccCchhHHHHHHHHHhcCCe----
Q 005074 499 EST-KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGVG---- 572 (715)
Q Consensus 499 ~~a-~~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~f~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~~---- 572 (715)
+.+ .+|+++|||||||+||++|||+|.|++.+++++|.|+| .|+|++|||||+++| |+|+++|.++++++.+.
T Consensus 238 ~~a~~~~~~lelgg~n~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~-d~f~~~l~~~~~~~~~g~~~~ 316 (473)
T cd07082 238 KQHPMKRLVLELGGKDPAIVLPDADLELAAKEIVKGALSYSGQRCTAIKRVLVHESVA-DELVELLKEEVAKLKVGMPWD 316 (473)
T ss_pred HHhCCCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHHhCCCcCCCCeEEEEcHHHH-HHHHHHHHHHHhcCCCCCCCC
Confidence 887 59999999999999999999999999999999999987 999999999999999 79999999999876321
Q ss_pred ------------------------------E-ecCcccccc-c-c-C-----CCCCCccccccCceEEEEEeCCHHHHHH
Q 005074 573 ------------------------------L-FGGPRASKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAID 613 (715)
Q Consensus 573 ------------------------------~-~g~~~~~~~-~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi~ 613 (715)
+ .|+....++ + | | +++++++||+||||++|++|+|+||||+
T Consensus 317 ~~~~~gp~i~~~~~~~~~~~~~~a~~~ga~~~~gg~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~ 396 (473)
T cd07082 317 NGVDITPLIDPKSADFVEGLIDDAVAKGATVLNGGGREGGNLIYPTLLDPVTPDMRLAWEEPFGPVLPIIRVNDIEEAIE 396 (473)
T ss_pred CCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCeEEeeEEEecCCCCCHHHhCcCcCceEEEEEeCCHHHHHH
Confidence 1 122111122 2 5 2 3578999999999999999999999999
Q ss_pred HHHhcCCCceeEEEecCHHHHHHHHHhcCcceEEEcCCCCC-CCCCccCCcccccccccccccccccccccceEEEEEEE
Q 005074 614 HIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRF-CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILR 692 (715)
Q Consensus 614 ~aN~~~~GL~a~i~t~d~~~~~~~~~~l~~G~V~iN~~~~~-~~~~pfG~g~~sG~~~~~~~~~g~~gl~~ft~~K~v~~ 692 (715)
++|+++|||++||||+|.+++.++++++++|+|+||+++.. .+..||||.|.||+| +++|++|+++||+.|++++
T Consensus 397 ~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~pfGG~k~SG~g----~~~g~~~l~~~~~~k~i~~ 472 (473)
T cd07082 397 LANKSNYGLQASIFTKDINKARKLADALEVGTVNINSKCQRGPDHFPFLGRKDSGIG----TQGIGDALRSMTRRKGIVI 472 (473)
T ss_pred HHhCCCCCceEEEEeCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCcccccccC----CCChHHHHHHhhceeEEEE
Confidence 99999999999999999999999999999999999997654 356899999999986 3468999999999999875
No 103
>cd07095 ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like. N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate.
Probab=100.00 E-value=5.3e-70 Score=605.77 Aligned_cols=374 Identities=17% Similarity=0.152 Sum_probs=310.7
Q ss_pred hHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhhchhHHHHHHhhcChhHHHHHHHHH
Q 005074 292 GAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSI 371 (715)
Q Consensus 292 ~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~ 371 (715)
|+++++++|++||+.|+++|.++|.++|++++++|++|+++|++++++|++++.. ++. .|+..+++.+
T Consensus 1 ~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~----ea~--------~ev~~~~~~~ 68 (431)
T cd07095 1 QVDAAVAAARAAFPGWAALSLEERAAILRRFAELLKANKEELARLISRETGKPLW----EAQ--------TEVAAMAGKI 68 (431)
T ss_pred CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHH----HHH--------HHHHHHHHHH
Confidence 5789999999999999999999999999999999999999999999877765432 221 2444444444
Q ss_pred HHHhcccc-cccccccccccCCCeEEEEeeeceeEEEEEcCC-Chh-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHH
Q 005074 372 RILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHK 448 (715)
Q Consensus 372 ~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGN~vvlKps~~tp~t~~~l~~ 448 (715)
++++.... ..+..... ..+...+++++|+|||++|+|| ||. +++++++|||++||+||+|||+.+|+++..+++
T Consensus 69 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VI~Kps~~~~~~~~~l~~ 145 (431)
T cd07095 69 DISIKAYHERTGERATP---MAQGRAVLRHRPHGVMAVFGPFNFPGHLPNGHIVPALLAGNTVVFKPSELTPAVAELMVE 145 (431)
T ss_pred HHHHHHHHHhcCCcccC---CCCceEEEEEecceEEEEECCCchHHHHHHHHHHHHHhcCCEEEeeCCCCCcHHHHHHHH
Confidence 44432211 11221111 1234567889999999999998 685 567999999999999999999999999999999
Q ss_pred HHHHhcccc-cCcCceEEecCcchhhHhhcCCCCccEEEeecCHHHHHHHHhhc----CCCEEEecCCcceEEEcCCCCH
Q 005074 449 VITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST----KIPVLGHADGICHVYVDKSANL 523 (715)
Q Consensus 449 ~~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a----~~~~~lElGGk~p~iV~~dADl 523 (715)
++.+ + +|+|++|+|+++.+++..|..||++|+|+||||+++|+.|++.+ .+|++||||||||+||++|||+
T Consensus 146 ~~~~----ag~P~g~~~~v~g~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~lElgG~~~~iV~~daDl 221 (431)
T cd07095 146 LWEE----AGLPPGVLNLVQGGRETGEALAAHEGIDGLLFTGSAATGLLLHRQFAGRPGKILALEMGGNNPLVVWDVADI 221 (431)
T ss_pred HHHH----hCcChhHheEEeCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHhhccCCCcEEEECCCCCeEEECCCCCH
Confidence 9987 7 99999999997556788888999999999999999999998864 3789999999999999999999
Q ss_pred HHHHHHHHhhccCCCc-cccccceEEEcCc-ccCchhHHHHHHHHHhcCCe-----------------------------
Q 005074 524 DVAKNIVIDAKIDYPA-ACNAMETLLVHKD-LACNGALNELVVELQHEGVG----------------------------- 572 (715)
Q Consensus 524 ~~A~~~iv~~~f~n~g-~C~a~~rv~V~~~-i~d~~f~~~l~~~~~~~~~~----------------------------- 572 (715)
|.|++.+++++|.|+| .|+|++|+|||++ +| |+|+++|+++++++.+.
T Consensus 222 ~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~~i~-d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~i~~~v~~a~ 300 (431)
T cd07095 222 DAAAYLIVQSAFLTAGQRCTCARRLIVPDGAVG-DAFLERLVEAAKRLRIGAPDAEPPFMGPLIIAAAAARYLLAQQDLL 300 (431)
T ss_pred HHHHHHHHHHHHHhCCCCCCCCeEEEEcCcchH-HHHHHHHHHHHHhCCCCCCCCCCCCcccccCHHHHHHHHHHHHHHH
Confidence 9999999999999987 9999999999999 99 79999999999876321
Q ss_pred -----E-ecCccc--cc-cc-c-C----CCCCCccccccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEecCHHHHHHH
Q 005074 573 -----L-FGGPRA--SK-LL-Q-I----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETF 637 (715)
Q Consensus 573 -----~-~g~~~~--~~-~~-p-v----~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~i~t~d~~~~~~~ 637 (715)
+ .|+... .+ ++ | | +++++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++
T Consensus 301 ~~ga~~l~gg~~~~~~g~~~~Ptv~~v~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~a~~~ 380 (431)
T cd07095 301 ALGGEPLLAMERLVAGTAFLSPGIIDVTDAADVPDEEIFGPLLQVYRYDDFDEAIALANATRFGLSAGLLSDDEALFERF 380 (431)
T ss_pred hcCCEEEeCCCcCCCCCeEEcCEEEecCCCChHHhCCCcCCeEEEEeeCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHH
Confidence 1 122111 12 23 5 2 3589999999999999999999999999999999999999999999999999
Q ss_pred HHhcCcceEEEcCCCCC-CCCCccCCcccccccccccccccccccccceEEEEE
Q 005074 638 LCQVDSAAVFHNASTRF-CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWI 690 (715)
Q Consensus 638 ~~~l~~G~V~iN~~~~~-~~~~pfG~g~~sG~~~~~~~~~g~~gl~~ft~~K~v 690 (715)
++++++|+|+||+++.. .+.+||||.|.||+| +++|++|++ |++.|++
T Consensus 381 ~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G----~~~g~~~~~-~~~~~~~ 429 (431)
T cd07095 381 LARIRAGIVNWNRPTTGASSTAPFGGVGLSGNH----RPSAYYAAD-YCAYPVA 429 (431)
T ss_pred HHhCCcceEEECCCCCCCCCCCCCCCcccccCC----CCChHHHHH-HHhhhhc
Confidence 99999999999986654 355899999999985 356899999 5555554
No 104
>cd07103 ALDH_F5_SSADH_GabD Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like. Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species.
Probab=100.00 E-value=1.2e-69 Score=609.24 Aligned_cols=395 Identities=18% Similarity=0.200 Sum_probs=336.5
Q ss_pred HHHHcCCcceeEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhh
Q 005074 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 347 (715)
Q Consensus 268 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~ 347 (715)
.+|.||+.++++...+ .+++++++++|++||+.|+++|.++|.++|+++++.|++++++|++++..|++++..
T Consensus 2 ~~P~tg~~i~~~~~~~------~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~- 74 (451)
T cd07103 2 INPATGEVIGEVPDAG------AADADAAIDAAAAAFKTWRKTTARERAAILRRWADLIRERAEDLARLLTLEQGKPLA- 74 (451)
T ss_pred cCCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHH-
Confidence 3578999999998888 899999999999999999999999999999999999999999999998877654432
Q ss_pred chhHHHHHHhhcChhHHHHHHHHHHHHhcccc-cccccccccccCCCeEEEEeeeceeEEEEEcCC-Chh-hHHHHHHHH
Q 005074 348 GYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 424 (715)
Q Consensus 348 g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~A 424 (715)
++ ..|+..+++.+++++...+ ..+...+.. ..+...+.+++|+|||++|+|| +|. +.+++++||
T Consensus 75 ---~a--------~~ev~~~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~A 141 (451)
T cd07103 75 ---EA--------RGEVDYAASFLEWFAEEARRIYGRTIPSP--APGKRILVIKQPVGVVAAITPWNFPAAMITRKIAPA 141 (451)
T ss_pred ---HH--------HHHHHHHHHHHHHHHHHHHHhcCcccccC--CCCcceEEEEeeceEEEEECCCchHHHHHHHHHHHH
Confidence 22 1356666666766654322 223322211 1244567889999999999998 686 457899999
Q ss_pred HHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-cchhhHhhcCCCCccEEEeecCHHHHHHHHhhc-
Q 005074 425 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST- 501 (715)
Q Consensus 425 LaaGN~vvlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a- 501 (715)
|++||+||+|||+.+|.++..+++++++ + ||+|++|+|++ +.+.++.|..|+++|+|+||||+.+|+.+++.+
T Consensus 142 L~aGN~VIlKps~~~~~~~~~l~~~l~~----aglP~g~v~~v~~~~~~~~~~l~~~~~vd~V~ftGs~~~g~~v~~~aa 217 (451)
T cd07103 142 LAAGCTVVLKPAEETPLSALALAELAEE----AGLPAGVLNVVTGSPAEIGEALCASPRVRKISFTGSTAVGKLLMAQAA 217 (451)
T ss_pred HHcCCEEEEECCccCcHHHHHHHHHHHH----cCCCcccEEEEecCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHH
Confidence 9999999999999999999999999986 7 99999999995 456778788899999999999999999998876
Q ss_pred --CCCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccCchhHHHHHHHHHhcCC-------
Q 005074 502 --KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------- 571 (715)
Q Consensus 502 --~~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~f~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~------- 571 (715)
.+|+++|||||||+||++|||++.|++.+++|+|.|+| .|++++|||||+++| |+|+++|+++++++..
T Consensus 218 ~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~-~~f~~~l~~~~~~~~~g~~~~~~ 296 (451)
T cd07103 218 DTVKRVSLELGGNAPFIVFDDADLDKAVDGAIASKFRNAGQTCVCANRIYVHESIY-DEFVEKLVERVKKLKVGNGLDEG 296 (451)
T ss_pred hcCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHHhcCCCCCCCeeEEEcHHHH-HHHHHHHHHHHHhccCCCCCCCC
Confidence 38999999999999999999999999999999999987 999999999999999 7999999999887532
Q ss_pred ---------------------------eE-ecCccc--cc-cc-c-C-----CCCCCccccccCceEEEEEeCCHHHHHH
Q 005074 572 ---------------------------GL-FGGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAID 613 (715)
Q Consensus 572 ---------------------------~~-~g~~~~--~~-~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi~ 613 (715)
++ .|+... .+ ++ | | +++++++||+||||++|++|+|+||||+
T Consensus 297 ~~~gp~i~~~~~~~~~~~i~~a~~~ga~~l~gg~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~ 376 (451)
T cd07103 297 TDMGPLINERAVEKVEALVEDAVAKGAKVLTGGKRLGLGGYFYEPTVLTDVTDDMLIMNEETFGPVAPIIPFDTEDEVIA 376 (451)
T ss_pred CCCCcCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCcEECCEEeeCCCCcCHHHhCCCCCceEEEEEECCHHHHHH
Confidence 11 122211 12 23 5 2 3578999999999999999999999999
Q ss_pred HHHhcCCCceeEEEecCHHHHHHHHHhcCcceEEEcCCCCCCCCCccCCcccccccccccccccccccccceEEEEEE
Q 005074 614 HIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 691 (715)
Q Consensus 614 ~aN~~~~GL~a~i~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~~~pfG~g~~sG~~~~~~~~~g~~gl~~ft~~K~v~ 691 (715)
++|+++|||++||||+|.++++++++++++|.|+||+++...+..||||.++||+| +++|++|+++||+.|++.
T Consensus 377 ~~n~~~~gl~~~i~t~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~SG~G----~~~g~~~~~~~~~~k~v~ 450 (451)
T cd07103 377 RANDTPYGLAAYVFTRDLARAWRVAEALEAGMVGINTGLISDAEAPFGGVKESGLG----REGGKEGLEEYLETKYVS 450 (451)
T ss_pred HHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCCccCcCC----ccchHHHHHHHhceeEEe
Confidence 99999999999999999999999999999999999998876677899999999885 356999999999999875
No 105
>cd07104 ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins. ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences.
Probab=100.00 E-value=3e-69 Score=602.79 Aligned_cols=377 Identities=21% Similarity=0.248 Sum_probs=317.7
Q ss_pred hHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhhchhHHHHHHhhcChhHHHHHHHHH
Q 005074 292 GAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSI 371 (715)
Q Consensus 292 ~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~ 371 (715)
|+++++++|++||+.|+++|.++|.++|++++++|++|+++|++++++|++++.. ++ ..|+..+++.+
T Consensus 1 ~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~----~~--------~~ei~~~~~~l 68 (431)
T cd07104 1 DVDRAYAAAAAAQKAWAATPPQERAAILRKAAEILEERRDEIADWLIRESGSTRP----KA--------AFEVGAAIAIL 68 (431)
T ss_pred CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH----HH--------HHHHHHHHHHH
Confidence 5899999999999999999999999999999999999999999999877655421 21 12566666666
Q ss_pred HHHhcccc-cccccccccccCCCeEEEEeeeceeEEEEEcCC-Chh-hHHHHHHHHHHhCCEEEEeCCcchHHH-HHHHH
Q 005074 372 RILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRS-NAILH 447 (715)
Q Consensus 372 ~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGN~vvlKps~~tp~t-~~~l~ 447 (715)
++++...+ ..+...+.. ..+...+++++|+|||++|+|| +|. +.++++++||++||+||+|||+.+|.+ +..+.
T Consensus 69 ~~~~~~~~~~~~~~~~~~--~~g~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~l~ 146 (431)
T cd07104 69 REAAGLPRRPEGEILPSD--VPGKESMVRRVPLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDSRTPVTGGLLIA 146 (431)
T ss_pred HHHHHHHHHhcCccccCC--CCCceeEEEEeeeeeEEEECCCCcHHHHHHHHHHHHHHcCCeEEeeCCCCChHHHHHHHH
Confidence 66654332 223222211 1244567889999999999998 585 567999999999999999999999998 56778
Q ss_pred HHHHHhcccc-cCcCceEEecC-cchhhHhhcCCCCccEEEeecCHHHHHHHHhhcC---CCEEEecCCcceEEEcCCCC
Q 005074 448 KVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK---IPVLGHADGICHVYVDKSAN 522 (715)
Q Consensus 448 ~~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a~---~~~~lElGGk~p~iV~~dAD 522 (715)
+++.+ + ||+|++|+|++ +.++++.|..||++|+|+||||+.+|+.|+++++ +|+++|||||||+||++|||
T Consensus 147 ~~l~~----aGlP~gvv~~v~g~~~~~~~~L~~~~~i~~V~ftGs~~~g~~v~~~aa~~~~~~~lelgG~~~~iV~~dad 222 (431)
T cd07104 147 EIFEE----AGLPKGVLNVVPGGGSEIGDALVEHPRVRMISFTGSTAVGRHIGELAGRHLKKVALELGGNNPLIVLDDAD 222 (431)
T ss_pred HHHHH----cCCCcccEEEeeCCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCcEEEEcCCCCeEEECCCCC
Confidence 88876 8 99999999995 5567888889999999999999999999988773 89999999999999999999
Q ss_pred HHHHHHHHHhhccCCCc-cccccceEEEcCcccCchhHHHHHHHHHhcCCe-----------------------------
Q 005074 523 LDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGVG----------------------------- 572 (715)
Q Consensus 523 l~~A~~~iv~~~f~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~~----------------------------- 572 (715)
++.|++.+++|+|.|+| .|++++|||||+++| |+|+++|+++++++.+.
T Consensus 223 l~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~-~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~ 301 (431)
T cd07104 223 LDLAVSAAAFGAFLHQGQICMAAGRILVHESVY-DEFVEKLVAKAKALPVGDPRDPDTVIGPLINERQVDRVHAIVEDAV 301 (431)
T ss_pred HHHHHHHHHHHHHhcCCCCcccCcEEEEcHHHH-HHHHHHHHHHHHhcCcCCCCCCCCccCcccCHHHHHHHHHHHHHHH
Confidence 99999999999999987 999999999999999 79999999998876321
Q ss_pred -----E-ecCccccccc-c-C-----CCCCCccccccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEecCHHHHHHHHH
Q 005074 573 -----L-FGGPRASKLL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLC 639 (715)
Q Consensus 573 -----~-~g~~~~~~~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~i~t~d~~~~~~~~~ 639 (715)
+ .|+.....++ | | +++++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++
T Consensus 302 ~~G~~~~~gg~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~ 381 (431)
T cd07104 302 AAGARLLTGGTYEGLFYQPTVLSDVTPDMPIFREEIFGPVAPVIPFDDDEEAVELANDTEYGLSAAVFTRDLERAMAFAE 381 (431)
T ss_pred HCCCEEEeCCCCCCceECCEEeecCCCCChhhhCcCcCCeEEEEEECCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHH
Confidence 1 1221111123 5 2 357899999999999999999999999999999999999999999999999999
Q ss_pred hcCcceEEEcCCCCCC-CCCccCCcccccccccccccccccccccceEEEEEE
Q 005074 640 QVDSAAVFHNASTRFC-DGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 691 (715)
Q Consensus 640 ~l~~G~V~iN~~~~~~-~~~pfG~g~~sG~~~~~~~~~g~~gl~~ft~~K~v~ 691 (715)
++++|+|+||+++... +.+||||.+.||+| +++|++|+++||+.|+++
T Consensus 382 ~l~~g~v~iN~~~~~~~~~~pfgG~~~SG~g----~~~g~~~l~~~~~~k~~~ 430 (431)
T cd07104 382 RLETGMVHINDQTVNDEPHVPFGGVKASGGG----RFGGPASLEEFTEWQWIT 430 (431)
T ss_pred hcCcCeEEECCCCCCCCCCCCCCCcccccCC----ccchHHHHHHhhceeEEe
Confidence 9999999999987654 67899999999875 346999999999999985
No 106
>TIGR02278 PaaN-DH phenylacetic acid degradation protein paaN. This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species.
Probab=100.00 E-value=1.6e-69 Score=626.00 Aligned_cols=396 Identities=17% Similarity=0.167 Sum_probs=324.7
Q ss_pred HHHHHcCCcceeEEecCCcccccHhhHHHHHHHHHHH-HHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
Q 005074 267 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARES-SRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQ 345 (715)
Q Consensus 267 l~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a-~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~ 345 (715)
..+|.+|+.++++...+ . ||++|+++|++| |+.|+++|..+|.++|++++++|++|+++|++ +++|+||+.
T Consensus 19 v~nP~tg~~i~~~~~~~------~-dv~~Av~~A~~aa~~~W~~~~~~eR~~~L~~~a~~l~~~~~ela~-~~~e~GK~~ 90 (663)
T TIGR02278 19 VRDASTGEVLARVTSEG------L-DVAAAVAWAREVGGPALRALTFHERARMLKALAQYLSERKEALYA-LAATTGATR 90 (663)
T ss_pred ccCCCCCCEEEEEcCCc------H-HHHHHHHHHHHhcchhhhcCCHHHHHHHHHHHHHHHHHHHHHHHH-HHHHcCCCH
Confidence 46789999999987766 4 899999999996 99999999999999999999999999999998 465544332
Q ss_pred hhchhHHHHHHhhcChhHHHHHHHHHHHHhccccc---------ccccccccccCCCeEEEEeeece-eEEEEEcCC-Ch
Q 005074 346 EAGYAKSLVSRLALKPGKISSLAKSIRILADMEEP---------IGQILKRTELADGLILEKTSCPL-GVLLIVFES-RP 414 (715)
Q Consensus 346 ~~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~---------~g~~~~~~~~~~~~~~~~~~~Pl-GVV~~I~p~-~P 414 (715)
.++ ..|++.+++.++++++..+. .|+..+.. .+.+...+++|+|+ |||++|+|| ||
T Consensus 91 ----~~a--------~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~P~~Gvv~~I~pwN~P 157 (663)
T TIGR02278 91 ----RDN--------WVDIDGGIGTLFTYSSLGRRELPDANLIPEDEFEPLS-KDGSFQGRHILTPKGGVAVQINAFNFP 157 (663)
T ss_pred ----HHH--------HHHHHHHHHHHHHHHHhhhhhccccccccCCceeccC-CCCccceEEEEEeCCceEEEEcCCchH
Confidence 122 23677788888887754322 13322211 11122457889998 999999998 58
Q ss_pred h-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecCcchhhHhhcCCCCccEEEeecCHH
Q 005074 415 D-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNK 492 (715)
Q Consensus 415 ~-~~~~~~~~ALaaGN~vvlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~v~~v~fTGS~~ 492 (715)
. +++++++|||++||+||+|||+.||+++..+++++.++ . ||+|+||+|++. .++++..++++|+|+||||++
T Consensus 158 ~~~~~~~~~~ALaaGN~Vv~KPs~~tp~~~~~l~~~~~~a---G~lP~gv~~~v~g~--~~~~~~~~~~~~~V~FTGS~~ 232 (663)
T TIGR02278 158 VWGLLEKFAPAFLAGVPTLAKPATPTAYVAEALVRTMVES---GLLPEGSLQLICGS--AGDLLDHLDHRDVVAFTGSAA 232 (663)
T ss_pred HHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHh---CCCCCCcEEEEeCC--hHHHHhcCCCCCEEEEECCHH
Confidence 5 57899999999999999999999999999999999873 3 899999999863 233444446799999999999
Q ss_pred HHHHHHhhc-----CCCEEEecCCcceEEEcCCCC-----HHHHHHHHHhhccCCCc-cccccceEEEcCcccCchhHHH
Q 005074 493 LVSQIKEST-----KIPVLGHADGICHVYVDKSAN-----LDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNE 561 (715)
Q Consensus 493 ~g~~i~~~a-----~~~~~lElGGk~p~iV~~dAD-----l~~A~~~iv~~~f~n~g-~C~a~~rv~V~~~i~d~~f~~~ 561 (715)
+|++|++.+ .+|++||||||||+||++||| ||.|++.+++|+|.|+| .|+|++|||||+++| |+|+++
T Consensus 233 ~G~~i~~~aaaa~~~~~~~lELGGk~p~IV~~dAd~~~~dl~~aa~~i~~~~f~~sGQ~C~a~~rv~V~~~i~-d~f~~~ 311 (663)
T TIGR02278 233 TADRLRAHPNVLERGIRFNAEADSLNAAILGEDATPDEPEFDLFAQEIVRELTIKAGQKCTAIRRVIVPKALL-EAVLKA 311 (663)
T ss_pred HHHHHHHhHhHHhcCceEEEEcCCCCeEEEcCCCCccchhHHHHHHHHHHHHHhcCCCCccCCceEEEeHHHH-HHHHHH
Confidence 999998853 389999999999999999999 99999999999999987 999999999999999 799999
Q ss_pred HHHHHHhcCC----------------------------------eE-ecCccc-cc-cc-c-C-----CCC-CCcccccc
Q 005074 562 LVVELQHEGV----------------------------------GL-FGGPRA-SK-LL-Q-I-----PET-RLFHHEYN 596 (715)
Q Consensus 562 l~~~~~~~~~----------------------------------~~-~g~~~~-~~-~~-p-v-----~~~-~~~~eE~F 596 (715)
|+++++++.+ ++ .|+... .+ ++ | | ++| .+++||+|
T Consensus 312 l~~~~~~l~vG~p~~~~t~~Gpli~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~~g~~~~PTvl~~~~~~~~~i~~eE~F 391 (663)
T TIGR02278 312 LQARLAKVVLGDPREEGVDMGPLVSLEQRADVEAAVAALLAAGAEVRLGGPGRLDGAFFPPTLLLAEDPWAGAVHATEAF 391 (663)
T ss_pred HHHHHHhccCCCccccCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCCeeEccEEEeeCCcchhhHHhcccc
Confidence 9999987632 11 233221 13 33 5 2 234 68999999
Q ss_pred CceEEEEEeCCHHHHHHHHHhcCCCceeEEEecCHHHHHHHHHhc--CcceEEE-cCCC-----C--C-CCCCccCCccc
Q 005074 597 SMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQV--DSAAVFH-NAST-----R--F-CDGARFGLGAE 665 (715)
Q Consensus 597 GPVl~v~~~~~~deAi~~aN~~~~GL~a~i~t~d~~~~~~~~~~l--~~G~V~i-N~~~-----~--~-~~~~pfG~g~~ 665 (715)
|||++|++|+|+||||+++|+++|||++||||+|.++++++++++ ++|+|+| |.+. . . .+.+||||.|.
T Consensus 392 GPVl~V~~~~~~~eai~~aN~~~~gL~a~vft~d~~~~~~~~~~l~~~~G~v~InN~~~~~~~~~~~~~~~~~pfGG~k~ 471 (663)
T TIGR02278 392 GPVATFFPYGDRAEAARLAARGGGSLVATLATSDPEEARQFILGLAPYHGRLHILNRDDAAESTGHGSPLPRLLHGGPGR 471 (663)
T ss_pred CCeEEEEeeCCHHHHHHHHHcCCCCceEEEEeCCHHHHHHHHHHHHhhCCEEEECCCcccccccCCCCCCCCCCCCCCcc
Confidence 999999999999999999999999999999999999999999999 8999999 6421 1 1 25689999999
Q ss_pred cccccccccc-ccccccccceEEEEEEEc
Q 005074 666 VGISTSRIHA-RGPVGVEGLLTTRWILRG 693 (715)
Q Consensus 666 sG~~~~~~~~-~g~~gl~~ft~~K~v~~~ 693 (715)
||+|. + +|.+++++|++.|+|..-
T Consensus 472 SG~G~----~~g~~~~l~~f~~~k~v~~~ 496 (663)
T TIGR02278 472 AGGGE----ELGGLRSVKHYMQRTAIQGS 496 (663)
T ss_pred CcCCC----ccchHHHHHHhceeEEEEcC
Confidence 99862 4 357999999999999764
No 107
>cd07128 ALDH_MaoC-N N-terminal domain of the monoamine oxidase C dehydratase. The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH.
Probab=100.00 E-value=1.4e-69 Score=610.08 Aligned_cols=392 Identities=18% Similarity=0.205 Sum_probs=319.6
Q ss_pred HHHHHcCCcceeEEecCCcccccHhhHHHHHHHHHHH-HHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
Q 005074 267 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARES-SRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQ 345 (715)
Q Consensus 267 l~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a-~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~ 345 (715)
..+|.||+.++++.. . .+|+++|+++|++| |+.|+++|.++|.++|++++++|++|+++|+++ +.|++++.
T Consensus 19 ~~nP~tg~~~~~~~~-~------~~dv~~Av~~A~~A~~~~W~~~~~~~Ra~~L~~~a~~l~~~~~~la~l-~~e~Gkp~ 90 (513)
T cd07128 19 LHDAVTGEVVARVSS-E------GLDFAAAVAYAREKGGPALRALTFHERAAMLKALAKYLMERKEDLYAL-SAATGATR 90 (513)
T ss_pred eECCCCCCEEEEEcC-C------HHHHHHHHHHHHHhhhchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHH-HHHcCCCH
Confidence 356889999999875 4 36999999999998 799999999999999999999999999999985 66654432
Q ss_pred hhchhHHHHHHhhcChhHHHHHHHHHHHHhcccccc---------cccccccccCCC-eEEEEeeec-eeEEEEEcCC-C
Q 005074 346 EAGYAKSLVSRLALKPGKISSLAKSIRILADMEEPI---------GQILKRTELADG-LILEKTSCP-LGVLLIVFES-R 413 (715)
Q Consensus 346 ~~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~---------g~~~~~~~~~~~-~~~~~~~~P-lGVV~~I~p~-~ 413 (715)
.++. .|+..+++.++++++..+.. ++..+.. ..+ ...+++++| +|||++|+|| |
T Consensus 91 ----~ea~--------~Ev~~~~~~~~~~a~~a~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~~GVv~~I~pwN~ 156 (513)
T cd07128 91 ----RDSW--------IDIDGGIGTLFAYASLGRRELPNAHFLVEGDVEPLS--KDGTFVGQHILTPRRGVAVHINAFNF 156 (513)
T ss_pred ----HHHH--------HHHHHHHHHHHHHHHHHHhhccccccccCCcccccC--CCccccceEEEEecccEEEEECCccc
Confidence 1221 25566666666665433211 2221110 111 134577999 5999999998 6
Q ss_pred hh-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-cchhhHhhcCCCCccEEEeecC
Q 005074 414 PD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGS 490 (715)
Q Consensus 414 P~-~~~~~~~~ALaaGN~vvlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGS 490 (715)
|. +.+++++|||++||+||+|||+.||+++..+++++.++ . ||+|++|+|++ +..+++.| +.+|+|+||||
T Consensus 157 P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~ea---G~lP~gv~~~v~g~~~~~~~~l---~~~d~v~fTGS 230 (513)
T cd07128 157 PVWGMLEKFAPALLAGVPVIVKPATATAYLTEAVVKDIVES---GLLPEGALQLICGSVGDLLDHL---GEQDVVAFTGS 230 (513)
T ss_pred HHHHHHHHHHHHHHcCCEEEEECCCCCCHHHHHHHHHHHHh---CCCCCCcEEEecCChHHHhccc---CCCCEEEEECC
Confidence 85 67899999999999999999999999999999999872 3 79999999995 33344333 56999999999
Q ss_pred HHHHHHHHhhc-----CCCEEEecCCcceEEEcCCCC-----HHHHHHHHHhhccCCCc-cccccceEEEcCcccCchhH
Q 005074 491 NKLVSQIKEST-----KIPVLGHADGICHVYVDKSAN-----LDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGAL 559 (715)
Q Consensus 491 ~~~g~~i~~~a-----~~~~~lElGGk~p~iV~~dAD-----l~~A~~~iv~~~f~n~g-~C~a~~rv~V~~~i~d~~f~ 559 (715)
+++|++|++.+ .+|++||||||||+||++||| +|.|++.+++++|.|+| +|++++|+|||++|| |+|+
T Consensus 231 ~~~G~~i~~~a~~a~~~~~~~lElGGknp~IV~~DAd~~~~dld~aa~~iv~~~f~~aGQ~C~a~~rv~V~~~i~-d~f~ 309 (513)
T cd07128 231 AATAAKLRAHPNIVARSIRFNAEADSLNAAILGPDATPGTPEFDLFVKEVAREMTVKAGQKCTAIRRAFVPEARV-DAVI 309 (513)
T ss_pred HHHHHHHHHHhhhhccCceEEEeccCcCcEEECCCCCcchhhHHHHHHHHHHHHHHhcCCcccCCceEEEehHHH-HHHH
Confidence 99999998863 389999999999999999999 99999999999999987 999999999999999 7999
Q ss_pred HHHHHHHHhcCC---------------------------------eE-ecCccc---------cc-cc-c-C-----C--
Q 005074 560 NELVVELQHEGV---------------------------------GL-FGGPRA---------SK-LL-Q-I-----P-- 586 (715)
Q Consensus 560 ~~l~~~~~~~~~---------------------------------~~-~g~~~~---------~~-~~-p-v-----~-- 586 (715)
++|+++++++.+ ++ .|+... .+ |+ | | +
T Consensus 310 ~~l~~~~~~l~~G~p~~~~~~lGpli~~~~~~~i~~~i~~a~~~A~vl~GG~~~~~~~~~~~~~g~~~~PTvl~~v~~~~ 389 (513)
T cd07128 310 EALKARLAKVVVGDPRLEGVRMGPLVSREQREDVRAAVATLLAEAEVVFGGPDRFEVVGADAEKGAFFPPTLLLCDDPDA 389 (513)
T ss_pred HHHHHHHHhcccCCCccCCCCcCCCCCHHHHHHHHHHHHHHHhCCEEEECCCccccccCCCCCCCEEECCEEEeccCCcc
Confidence 999999987631 11 244321 13 33 5 2 2
Q ss_pred CCCCccccccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEecCHHHHHHHHHhcC--cceEEEcCCCC---------CC
Q 005074 587 ETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVD--SAAVFHNASTR---------FC 655 (715)
Q Consensus 587 ~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~i~t~d~~~~~~~~~~l~--~G~V~iN~~~~---------~~ 655 (715)
.+.+++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++++++++ +|+||||..+. ..
T Consensus 390 ~~~i~~eE~FGPVl~V~~~~~~deai~~aN~~~~gL~asvft~d~~~~~~~~~~l~~~~G~v~IN~~~~~~~~~~~~~~~ 469 (513)
T cd07128 390 ATAVHDVEAFGPVATLMPYDSLAEAIELAARGRGSLVASVVTNDPAFARELVLGAAPYHGRLLVLNRDSAKESTGHGSPL 469 (513)
T ss_pred cchHHhCCCcCCeEEEEeeCCHHHHHHHHhcCCCCeeEEEEeCCHHHHHHHHHHHHhhCCEEEEcCCccccccccccCCC
Confidence 26889999999999999999999999999999999999999999999999999997 99999998642 23
Q ss_pred CCCccCCccccccccccccc-ccccccccceEEEEEE
Q 005074 656 DGARFGLGAEVGISTSRIHA-RGPVGVEGLLTTRWIL 691 (715)
Q Consensus 656 ~~~pfG~g~~sG~~~~~~~~-~g~~gl~~ft~~K~v~ 691 (715)
+.+||||.|.||+|+ + +|.+|+++|++.|+|.
T Consensus 470 ~~~pfGG~k~SG~G~----~~gg~~~l~~~~~~k~v~ 502 (513)
T cd07128 470 PQLVHGGPGRAGGGE----ELGGLRGVKHYMQRTAVQ 502 (513)
T ss_pred CCCCCCCcccCCCCc----ccccHHHHHHhheeeeee
Confidence 568999999999863 3 3689999999999865
No 108
>PRK11904 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed
Probab=100.00 E-value=1.2e-68 Score=638.95 Aligned_cols=430 Identities=19% Similarity=0.172 Sum_probs=354.8
Q ss_pred hHHHHHHHHHHHHcCCc--EEEEeCC-CcchHHHHHcCC-cceeEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHH
Q 005074 239 MTAKVNAAYCAACAGIP--VVITSGF-AMDSIIKVLEGK-RVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQD 314 (715)
Q Consensus 239 M~~Kl~aa~~a~~~gv~--v~I~~g~-~~~~l~~~~tg~-~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~ 314 (715)
.+.++++++...+...- -.|++|. ....+.+|.+++ .+|++..++ .+++++|+++|++||+.|+++|.++
T Consensus 535 ~~~~~~~al~~~~~~~~~~~~~i~g~~~~~~v~nP~~~~~~vg~v~~a~------~~~v~~Ai~aA~~A~~~W~~~~~~~ 608 (1038)
T PRK11904 535 ELEPLAAAIAAFLEKQWQAGPIINGEGEARPVVSPADRRRVVGEVAFAD------AEQVEQALAAARAAFPAWSRTPVEE 608 (1038)
T ss_pred HHHHHHHHHHHHHhcCceecceEcCCCCeEEEECCCCCCeeEEEEeCCC------HHHHHHHHHHHHHHHHHhccCCHHH
Confidence 35567777776665432 2344651 122347888887 889999999 8999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhhchhHHHHHHhhcChhHHHHHHHHHHHHhccccc-ccccccccccCCC
Q 005074 315 RRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADG 393 (715)
Q Consensus 315 R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~ 393 (715)
|.++|++++++|++++++|+.++++|.+|+. .++ ..|+..+++.+++++...+. .+...... .+.+
T Consensus 609 Ra~iL~kaAdll~~~~~eL~~l~~~E~GK~~----~~a--------~~EV~eaid~lr~ya~~a~~~~~~~~~l~-g~~g 675 (1038)
T PRK11904 609 RAAILERAADLLEANRAELIALCVREAGKTL----QDA--------IAEVREAVDFCRYYAAQARRLFGAPEKLP-GPTG 675 (1038)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHhCCCH----HHH--------HHHHHHHHHHHHHHHHHHHHhhCCCcccC-CCCC
Confidence 9999999999999999999999887765432 122 24677788888887754432 22211110 1224
Q ss_pred eEEEEeeeceeEEEEEcCC-Chh-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-c
Q 005074 394 LILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-R 469 (715)
Q Consensus 394 ~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGN~vvlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~-~ 469 (715)
...+..++|+|||++|+|| ||. +.++++++||++||+||+|||++||+++..+++++++ + +|+|++|+|+| +
T Consensus 676 e~n~~~~~P~GVv~~IsPwNfPlai~~~~i~aALaaGNtVIlKPse~tpl~a~~l~~ll~e----AGlP~gvl~lv~G~g 751 (1038)
T PRK11904 676 ESNELRLHGRGVFVCISPWNFPLAIFLGQVAAALAAGNTVIAKPAEQTPLIAAEAVKLLHE----AGIPKDVLQLLPGDG 751 (1038)
T ss_pred ceeEEEEecceEEEEECCCccHHHHHHHHHHHHHHcCCEEEeeCCCcCHHHHHHHHHHHHH----hCcCcceEEEeeCCc
Confidence 5567889999999999998 685 5678999999999999999999999999999999987 8 99999999996 5
Q ss_pred chhhHhhcCCCCccEEEeecCHHHHHHHHhhc------CCCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-ccc
Q 005074 470 EEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST------KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACN 542 (715)
Q Consensus 470 ~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a------~~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~f~n~g-~C~ 542 (715)
+++++.|..||+|++|+||||+.+|+.|++.+ .+|+++|+|||||+||++|||+|+|++.+++|+|.|+| .|+
T Consensus 752 ~~vg~~Lv~~p~v~~V~FTGS~~~g~~I~~~~A~~~g~~~pvi~ElGGkNa~IV~~dAdld~Av~~iv~saF~~aGQ~Cs 831 (1038)
T PRK11904 752 ATVGAALTADPRIAGVAFTGSTETARIINRTLAARDGPIVPLIAETGGQNAMIVDSTALPEQVVDDVVTSAFRSAGQRCS 831 (1038)
T ss_pred hHHHHHHhcCCCcCeEEEECCHHHHHHHHHHHhhccCCCceEEEEcCCcCeEEECCCCCHHHHHHHHHHHHHhCCCCccc
Confidence 66889999999999999999999999997665 26999999999999999999999999999999999987 999
Q ss_pred ccceEEEcCcccCchhHHHHHHHHHhcCCe---------------------------------E-ecCccc----cccc-
Q 005074 543 AMETLLVHKDLACNGALNELVVELQHEGVG---------------------------------L-FGGPRA----SKLL- 583 (715)
Q Consensus 543 a~~rv~V~~~i~d~~f~~~l~~~~~~~~~~---------------------------------~-~g~~~~----~~~~- 583 (715)
|++|+|||++|| |+|+++|+++++++.+. + .|+... .++|
T Consensus 832 A~~rl~V~~si~-d~fl~~L~~~~~~l~vGdp~d~~t~~GPvI~~~a~~~l~~~I~~a~~ga~vl~gg~~~~~~~~G~fv 910 (1038)
T PRK11904 832 ALRVLFVQEDIA-DRVIEMLKGAMAELKVGDPRLLSTDVGPVIDAEAKANLDAHIERMKREARLLAQLPLPAGTENGHFV 910 (1038)
T ss_pred cCcEEEEeHHHH-HHHHHHHHHHHHhccCCCcccccCCccCCCCHHHHHHHHHHHHHHHcCCEEEeCCCCCCCCCCceEE
Confidence 999999999999 79999999999877321 1 122111 1333
Q ss_pred -c-C---CCCCCccccccCceEEEEEeC--CHHHHHHHHHhcCCCceeEEEecCHHHHHHHHHhcCcceEEEcCCCCCC-
Q 005074 584 -Q-I---PETRLFHHEYNSMVCTVEIVD--DVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFC- 655 (715)
Q Consensus 584 -p-v---~~~~~~~eE~FGPVl~v~~~~--~~deAi~~aN~~~~GL~a~i~t~d~~~~~~~~~~l~~G~V~iN~~~~~~- 655 (715)
| | +++.+++||+||||++|++|+ |+||||+++|+++|||++||||+|.++++++++++++|+||||+.....
T Consensus 911 ~PTvi~~~~~~~~~eEiFGPVL~V~~~~~~~ldeaI~~iN~t~yGLt~~IfS~d~~~~~~~~~~l~aG~vyIN~~~~ga~ 990 (1038)
T PRK11904 911 APTAFEIDSISQLEREVFGPILHVIRYKASDLDKVIDAINATGYGLTLGIHSRIEETADRIADRVRVGNVYVNRNQIGAV 990 (1038)
T ss_pred eeEEEccCCcHHhCCCCcCcEEEEEEeCCCCHHHHHHHHhCCCCCCEEEEEcCCHHHHHHHHHhCCEEEEEEeCCCccCC
Confidence 5 3 456789999999999999997 7999999999999999999999999999999999999999999876542
Q ss_pred -CCCccCCcccccccccccccccccccccceEEEEEEEcCc
Q 005074 656 -DGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNG 695 (715)
Q Consensus 656 -~~~pfG~g~~sG~~~~~~~~~g~~gl~~ft~~K~v~~~~~ 695 (715)
...||||.+.||.|. +.+|++++++|++.|+|.++..
T Consensus 991 vg~qPFGG~~~SG~G~---kaGG~~~L~~f~~~ktv~~~~~ 1028 (1038)
T PRK11904 991 VGVQPFGGQGLSGTGP---KAGGPHYLLRFATEKTVTVNTT 1028 (1038)
T ss_pred CCCCCCCCCCCCCCCC---ccchHHHHHHHhceEEEEEccc
Confidence 346999999998752 3568999999999999988643
No 109
>cd07081 ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldehyde dehydrogenase (ACDH), Ethanolamine utilization protein EutE, and related proteins. Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA. The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH, and may be critical enzymes in the fermentative pathway.
Probab=100.00 E-value=2.4e-68 Score=589.41 Aligned_cols=381 Identities=16% Similarity=0.183 Sum_probs=298.6
Q ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhhchhHHHHHHhhcChhHHHHHHH--H
Q 005074 293 AREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAK--S 370 (715)
Q Consensus 293 v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~i~~~~~--~ 370 (715)
+++|+++|++||+.|+++|+++|.++|++++++|++|+++|++++++|.+++. .++.. ++..++. .
T Consensus 1 ~~~Ai~~A~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~----~ea~~--------~~~~~~~~~~ 68 (439)
T cd07081 1 LDDAVAAAKVAQQGLSCKSQEMVDLIFRAAAEAAEDARIDLAKLAVSETGMGR----VEDKV--------IKNHFAAEYI 68 (439)
T ss_pred CHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCh----HHHHH--------HHHHHHHHHH
Confidence 47899999999999999999999999999999999999999999988776542 12211 1222222 1
Q ss_pred HHHHhcccccccccccccccCCCeEEEEeeeceeEEEEEcCC-Chh-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHH
Q 005074 371 IRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHK 448 (715)
Q Consensus 371 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGN~vvlKps~~tp~t~~~l~~ 448 (715)
.++++.. ..+...+. ..+...+++|+|+|||++|+|| ||. +.+++++|||++||+||+|||++||+++..+++
T Consensus 69 ~~~~~~~--~~~~~~~~---~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~ 143 (439)
T cd07081 69 YNVYKDE--KTCGVLTG---DENGGTLIIAEPIGVVASITPSTNPTSTVIFKSLISLKTRNSIIFSPHPRAKKVTQRAAT 143 (439)
T ss_pred HHHHhcc--ccCceecC---CCCCceEEEEecceEEEEECCCcchHHHHHHHHHHHHhcCCeEEEECCccchHHHHHHHH
Confidence 2333321 12222221 1123457889999999999998 685 677999999999999999999999999999999
Q ss_pred HHHHhcccc-cCcCceEEecC-cchhhHhhcCCCCccEEEeecCHHHHHHHHhhcCCCEEEecCCcceEEEcCCCCHHHH
Q 005074 449 VITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVA 526 (715)
Q Consensus 449 ~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a~~~~~lElGGk~p~iV~~dADl~~A 526 (715)
++.+++.++ +|+|+||+|++ +.++++.|..||+|++|+||||+++.+..++ ..||+++|||||||+||++|||+|+|
T Consensus 144 l~~~~l~~aG~P~gvv~~v~g~~~~~g~~L~~~~~V~~V~FTGs~~v~~~aa~-~~k~~~lElGGk~p~IV~~dADl~~A 222 (439)
T cd07081 144 LLLQAAVAAGAPENLIGWIDNPSIELAQRLMKFPGIGLLLATGGPAVVKAAYS-SGKPAIGVGAGNTPVVIDETADIKRA 222 (439)
T ss_pred HHHHHHHHcCCChhhEEEEcCCCHHHHHHHHcCCCCCEEEEECCHHHHHHHHh-cCCCEEEEcCCCCeEEEcCCCCHHHH
Confidence 999988889 99999999995 5568888889999999999999997665533 36899999999999999999999999
Q ss_pred HHHHHhhccCCCc-cccccceEEEcCcccCchhHHHHHHHHHh-------------------cCCeEecCcc-----ccc
Q 005074 527 KNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQH-------------------EGVGLFGGPR-----ASK 581 (715)
Q Consensus 527 ~~~iv~~~f~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~-------------------~~~~~~g~~~-----~~~ 581 (715)
++.+++|+|.|+| +|+|.+|+|||++|| |+|+++|++++.- .|..+.|+.. ..+
T Consensus 223 a~~iv~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~gg~~~~~~~~~G 301 (439)
T cd07081 223 VQSIVKSKTFDNGVICASEQSVIVVDSVY-DEVMRLFEGQGAYKLTAEELQQVQPVILKNGDVNRDIVGQDAYKIAAAAG 301 (439)
T ss_pred HHHHHHHHhcCCCCCCCCCCEEEEcHHHH-HHHHHHHHHcCCccCCHHHHHHHHHHHHhcCCcCCcccCCCHHHHHHHcC
Confidence 9999999999987 999999999999999 7999999886411 1333333321 012
Q ss_pred c-c-c----C-------CCCCCccccccCceEEEEEeCCHHHHHHHHHhc----CCCceeEEEecC---HHHHHHHHHhc
Q 005074 582 L-L-Q----I-------PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQH----GSAHTDCIVAED---QKVAETFLCQV 641 (715)
Q Consensus 582 ~-~-p----v-------~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~----~~GL~a~i~t~d---~~~~~~~~~~l 641 (715)
+ + | + ++|++++||+||||++|++|+|+||||+++|++ +|||+++|||+| .++++++++++
T Consensus 302 ~~~~pt~~~i~~~~~~~~~~~i~~eE~FGPVl~v~~~~~~dEAi~~aN~~~n~~~~GLsa~V~T~d~~~~~~a~~~a~~l 381 (439)
T cd07081 302 LKVPQETRILIGEVTSLAEHEPFAHEKLSPVLAMYRAANFADADAKALALKLEGGCGHTSAMYSDNIKAIENMNQFANAM 381 (439)
T ss_pred CccCCCceEEEEecCCCCCCchhhhCccCceEEEEEcCCHHHHHHHHHHHhhccCCCceEEEECCCcchHHHHHHHHhhC
Confidence 2 2 2 1 468999999999999999999999999999976 799999999999 99999999999
Q ss_pred CcceEEEcCCCCCC---CCCccCCccccccccccccccc---ccccccceEEEEEEE
Q 005074 642 DSAAVFHNASTRFC---DGARFGLGAEVGISTSRIHARG---PVGVEGLLTTRWILR 692 (715)
Q Consensus 642 ~~G~V~iN~~~~~~---~~~pfG~g~~sG~~~~~~~~~g---~~gl~~ft~~K~v~~ 692 (715)
++|+|+||.++.+. ....||+...+-+|++..+..+ ..+..+|+++|.+.+
T Consensus 382 ~~G~V~iN~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (439)
T cd07081 382 KTSRFVKNGPCSQGGLGDLYNFRGWPSMTLGCGTWGGNSVSENVGPKHLVNLKTVAL 438 (439)
T ss_pred CceEEEEeCCccccccccccCCCCCeeEeeecCCCCCCCcCCCCChHhhheeeeeec
Confidence 99999999876332 1223444443333221111111 246788999988765
No 110
>PRK11903 aldehyde dehydrogenase; Provisional
Probab=100.00 E-value=1.1e-68 Score=604.58 Aligned_cols=396 Identities=16% Similarity=0.169 Sum_probs=322.8
Q ss_pred HHHHHcCCcceeEEecCCcccccHhhHHHHHHHHHHHH-HHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
Q 005074 267 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESS-RRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQ 345 (715)
Q Consensus 267 l~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~-~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~ 345 (715)
..+|.||+.++++.. + .+||++|+++|++|| +.|+++|..+|.++|++++++|++|+++|+++++.|.||..
T Consensus 23 ~~nP~tge~l~~v~~-~------~~dv~~Av~aA~~A~~~~W~~~~~~eR~~~L~~~a~~l~~~~~ela~~~~~e~Gkp~ 95 (521)
T PRK11903 23 LFDPVTGEELVRVSA-T------GLDLAAAFAFAREQGGAALRALTYAQRAALLAAIVKVLQANRDAYYDIATANSGTTR 95 (521)
T ss_pred eECCCCCCEEEEecC-C------hHHHHHHHHHHHHhhhhhhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCH
Confidence 356889999999875 6 689999999999995 99999999999999999999999999999998876655432
Q ss_pred hhchhHHHHHHhhcChhHHHHHHHHHHHHhcccccc-cccccccc------cCCCeEEEEeeec-eeEEEEEcCC-Chh-
Q 005074 346 EAGYAKSLVSRLALKPGKISSLAKSIRILADMEEPI-GQILKRTE------LADGLILEKTSCP-LGVLLIVFES-RPD- 415 (715)
Q Consensus 346 ~~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-g~~~~~~~------~~~~~~~~~~~~P-lGVV~~I~p~-~P~- 415 (715)
.++ ..|+..+++.++++++..+.. +....... .......++.++| +|||++|+|| ||.
T Consensus 96 ----~~a--------~~ev~~~i~~l~~~a~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~pwN~P~~ 163 (521)
T PRK11903 96 ----NDS--------AVDIDGGIFTLGYYAKLGAALGDARLLRDGEAVQLGKDPAFQGQHVLVPTRGVALFINAFNFPAW 163 (521)
T ss_pred ----HHH--------HHHHHHHHHHHHHHHHHHHHcCCCcccCCCccccccccccccceEEEecCcceEEEECCcchHHH
Confidence 122 236777788888777543221 21110000 0011224567899 6999999998 585
Q ss_pred hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-cchhhHhhcCCCCccEEEeecCHHH
Q 005074 416 ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKL 493 (715)
Q Consensus 416 ~~~~~~~~ALaaGN~vvlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGS~~~ 493 (715)
++.++++|||++||+||+|||+.||.++..+++++.++ . ||+|+||+|+| ++++.+.| +++|+|+||||+++
T Consensus 164 ~~~~~~~~ALaaGN~VV~KPs~~tp~~~~~l~~~~~~a---g~lP~gv~~~v~g~~~~~~~~l---~~v~~v~fTGS~~~ 237 (521)
T PRK11903 164 GLWEKAAPALLAGVPVIVKPATATAWLTQRMVKDVVAA---GILPAGALSVVCGSSAGLLDHL---QPFDVVSFTGSAET 237 (521)
T ss_pred HHHHHHHHHHHcCCeEEEEcCCcChHHHHHHHHHHHHh---CCCCcCceEEeeCCchHHHhcc---cCCCEEEEECCHHH
Confidence 56789999999999999999999999999999999872 4 89999999996 44555444 68999999999999
Q ss_pred HHHHHhhc-----CCCEEEecCCcceEEEcCCCC-----HHHHHHHHHhhccCCCc-cccccceEEEcCcccCchhHHHH
Q 005074 494 VSQIKEST-----KIPVLGHADGICHVYVDKSAN-----LDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNEL 562 (715)
Q Consensus 494 g~~i~~~a-----~~~~~lElGGk~p~iV~~dAD-----l~~A~~~iv~~~f~n~g-~C~a~~rv~V~~~i~d~~f~~~l 562 (715)
|++|++.+ .+|++||||||||+||++||| +|.|++.+++|+|.|+| +|++++|+|||+++| |+|+++|
T Consensus 238 G~~v~~~aa~~~~~~~~~lElGGknp~IV~~dAd~~~~~~~~aa~~i~~~~f~~sGQ~C~a~~rv~V~~~i~-d~f~~~L 316 (521)
T PRK11903 238 AAVLRSHPAVVQRSVRVNVEADSLNSALLGPDAAPGSEAFDLFVKEVVREMTVKSGQKCTAIRRIFVPEALY-DAVAEAL 316 (521)
T ss_pred HHHHHhhhhhhccCceeEeeccccCceEEccCCcccchhHHHHHHHHHHHHHhccCCCccCCeEEEEehhHH-HHHHHHH
Confidence 99998853 389999999999999999999 59999999999999987 999999999999999 7999999
Q ss_pred HHHHHhcCC---------------------------------eE-ecCccc--------cc-cc-c-C-----C--CCCC
Q 005074 563 VVELQHEGV---------------------------------GL-FGGPRA--------SK-LL-Q-I-----P--ETRL 590 (715)
Q Consensus 563 ~~~~~~~~~---------------------------------~~-~g~~~~--------~~-~~-p-v-----~--~~~~ 590 (715)
+++++++.+ ++ .|+... .+ ++ | | + ++.+
T Consensus 317 ~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~~~~ga~vl~gg~~~~~~~~~~~~g~~~~PTvl~~~~~~~~~~i 396 (521)
T PRK11903 317 AARLAKTTVGNPRNDGVRMGPLVSRAQLAAVRAGLAALRAQAEVLFDGGGFALVDADPAVAACVGPTLLGASDPDAATAV 396 (521)
T ss_pred HHHHHhccCCCCCCCcCccCCCCCHHHHHHHHHHHHHHhcCCEEEECCccCCCCCCCCCCCeEEcCEEEeccCCCccchH
Confidence 999987622 11 233221 13 33 5 2 1 2578
Q ss_pred ccccccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEecCHHHHHHHHHhc--CcceEEEcCCCC---------CCCCCc
Q 005074 591 FHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQV--DSAAVFHNASTR---------FCDGAR 659 (715)
Q Consensus 591 ~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~i~t~d~~~~~~~~~~l--~~G~V~iN~~~~---------~~~~~p 659 (715)
++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.++++++ ++|+|+||+++. ..+.+|
T Consensus 397 ~~eE~FGPvl~V~~~~~~~eai~~~N~~~~gL~asvft~d~~~~~~~~~~l~~~~G~V~iN~~~~~~~~~~~~~~~~~~P 476 (521)
T PRK11903 397 HDVEVFGPVATLLPYRDAAHALALARRGQGSLVASVYSDDAAFLAAAALELADSHGRVHVISPDVAALHTGHGNVMPQSL 476 (521)
T ss_pred HhCcccCCeEEEEeeCCHHHHHHHHhcCCCCceEEEEeCCHHHHHHHHHHHHHhCCEEEEcCcccccccccCCCCCCCCC
Confidence 899999999999999999999999999999999999999999999999999 999999997542 234689
Q ss_pred cCCccccccccccccc-ccccccccceEEEEEEE
Q 005074 660 FGLGAEVGISTSRIHA-RGPVGVEGLLTTRWILR 692 (715)
Q Consensus 660 fG~g~~sG~~~~~~~~-~g~~gl~~ft~~K~v~~ 692 (715)
|||.|.||+|+ + +|++++++||+.|+|..
T Consensus 477 fGG~k~SG~Gr----~~g~~~~l~~~t~~~~~~~ 506 (521)
T PRK11903 477 HGGPGRAGGGE----ELGGLRALAFYHRRSAVQA 506 (521)
T ss_pred CCCCCcCcCCc----ccccHHHHHHHhccceeeC
Confidence 99999999862 3 35799999999777654
No 111
>cd07134 ALDH_AlkH-like Pseudomonas putida Aldehyde dehydrogenase AlkH-like. Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD.
Probab=100.00 E-value=4.8e-68 Score=590.40 Aligned_cols=378 Identities=19% Similarity=0.216 Sum_probs=310.4
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhhchhHHHHHHhhcChhHHHHHHHHHHHH
Q 005074 295 EMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRIL 374 (715)
Q Consensus 295 ~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~~ 374 (715)
+++++|++||+.|+++|..+|.++|++++++|++|+++|+++++.|+++... ++...++......+++++..++.+
T Consensus 2 ~~~~~a~~a~~~W~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~----ea~~~ev~~~~~~~~~~~~~~~~~ 77 (433)
T cd07134 2 RVFAAQQAHALALRASTAAERIAKLKRLKKAILARREEIIAALAADFRKPAA----EVDLTEILPVLSEINHAIKHLKKW 77 (433)
T ss_pred hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHH----HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5788999999999999999999999999999999999999999888765432 222222333333444444443332
Q ss_pred hcccccccccccccccCCCeEEEEeeeceeEEEEEcCC-Chh-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHH
Q 005074 375 ADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITS 452 (715)
Q Consensus 375 ~~~~~~~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGN~vvlKps~~tp~t~~~l~~~~~~ 452 (715)
... ...+......+...++.|+|+|||++|+|| +|. +.+++++|||++||+||+|||+.+|.++.++++++++
T Consensus 78 ~~~-----~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~~~~~~~ 152 (433)
T cd07134 78 MKP-----KRVRTPLLLFGTKSKIRYEPKGVCLIISPWNYPFNLAFGPLVSAIAAGNTAILKPSELTPHTSAVIAKIIRE 152 (433)
T ss_pred hCC-----cccCCccccCCCceEEEEecCCEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHH
Confidence 211 111100001233467899999999999998 685 5679999999999999999999999999999999986
Q ss_pred hcccccCcCceEEecCcchhhHhhcCCCCccEEEeecCHHHHHHHHhhcC---CCEEEecCCcceEEEcCCCCHHHHHHH
Q 005074 453 AIPDTVGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK---IPVLGHADGICHVYVDKSANLDVAKNI 529 (715)
Q Consensus 453 al~~alP~gvv~vv~~~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a~---~~~~lElGGk~p~iV~~dADl~~A~~~ 529 (715)
++|+|++|+++++.+.+..|.+|| +++|+||||+.+|+.|++.+. +|+++|||||||+||++|||++.|++.
T Consensus 153 ----a~p~g~v~~v~g~~~~~~~l~~~~-v~~v~ftGs~~~g~~i~~~aa~~~~~~~lelgG~~~~iV~~dAD~~~aa~~ 227 (433)
T cd07134 153 ----AFDEDEVAVFEGDAEVAQALLELP-FDHIFFTGSPAVGKIVMAAAAKHLASVTLELGGKSPTIVDETADLKKAAKK 227 (433)
T ss_pred ----hCCcCEEEEEeCChhHHHHHHhCC-CCEEEEECChHHHHHHHHHHHhcCCcEEEEccCCCcEEECCCCCHHHHHHH
Confidence 599999999996555677777887 999999999999999988763 899999999999999999999999999
Q ss_pred HHhhccCCCc-cccccceEEEcCcccCchhHHHHHHHHHhcCC-e----------------------------------E
Q 005074 530 VIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV-G----------------------------------L 573 (715)
Q Consensus 530 iv~~~f~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~-~----------------------------------~ 573 (715)
+++++|.|+| .|++++|+|||+++| |+|+++|+++++++.. . +
T Consensus 228 i~~~~~~~~GQ~C~a~~rv~V~~~v~-d~f~~~L~~~~~~~~~~~~~~~~~~~~gpli~~~~~~~i~~~i~~a~~~ga~~ 306 (433)
T cd07134 228 IAWGKFLNAGQTCIAPDYVFVHESVK-DAFVEHLKAEIEKFYGKDAARKASPDLARIVNDRHFDRLKGLLDDAVAKGAKV 306 (433)
T ss_pred HHHHhhcCcCCcccCCcEEEECHHHH-HHHHHHHHHHHHHHcCCCCCcCCCCccCCcCCHHHHHHHHHHHHHHHhCCCEE
Confidence 9999999987 999999999999999 7999999999886511 0 0
Q ss_pred -ecCccc-cc-cc-c-C-----CCCCCccccccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEecCHHHHHHHHHhcCc
Q 005074 574 -FGGPRA-SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDS 643 (715)
Q Consensus 574 -~g~~~~-~~-~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~i~t~d~~~~~~~~~~l~~ 643 (715)
.|+... .+ ++ | | +++.+++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++
T Consensus 307 ~~gg~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~ 386 (433)
T cd07134 307 EFGGQFDAAQRYIAPTVLTNVTPDMKIMQEEIFGPVLPIITYEDLDEVIEYINAKPKPLALYVFSKDKANVNKVLARTSS 386 (433)
T ss_pred EeCCCcCCCCCEEeeEEEeCCCCccHHHhccccCceEEEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCc
Confidence 122111 12 22 5 2 3578999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEcCCCCC--CCCCccCCcccccccccccccccccccccceEEEEEE
Q 005074 644 AAVFHNASTRF--CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 691 (715)
Q Consensus 644 G~V~iN~~~~~--~~~~pfG~g~~sG~~~~~~~~~g~~gl~~ft~~K~v~ 691 (715)
|.|+||+++.. .+..||||.|.||+| +++|++|+++||+.|+|.
T Consensus 387 g~v~iN~~~~~~~~~~~PfGG~k~SG~G----~~~g~~~l~~~~~~k~i~ 432 (433)
T cd07134 387 GGVVVNDVVLHFLNPNLPFGGVNNSGIG----SYHGVYGFKAFSHERAVL 432 (433)
T ss_pred ceEEECCcccccCCCCCCCCCcCcccCC----CcCcHHHHHHhcccceee
Confidence 99999987643 357899999999986 346999999999999875
No 112
>cd07087 ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins. ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate.
Probab=100.00 E-value=6.6e-68 Score=588.95 Aligned_cols=378 Identities=22% Similarity=0.263 Sum_probs=310.5
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhhchhHHHHHHhhcChhHHHHHHHHHHHH
Q 005074 295 EMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRIL 374 (715)
Q Consensus 295 ~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~~ 374 (715)
+++++|++||+.|+.+|..+|.++|++++++|++|+++|+++++.|++++. .++...++..+...++++++.++.+
T Consensus 2 ~~v~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~----~~~~~~Ev~~~~~~~~~~~~~~~~~ 77 (426)
T cd07087 2 ELVARLRETFLTGKTRSLEWRKAQLKALKRMLTENEEEIAAALYADLGKPP----AEAYLTEIAVVLGEIDHALKHLKKW 77 (426)
T ss_pred hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCH----HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 488999999999999999999999999999999999999999987766542 1222223333334444444444433
Q ss_pred hcccccccccccccccCCCeEEEEeeeceeEEEEEcCC-Chh-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHH
Q 005074 375 ADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITS 452 (715)
Q Consensus 375 ~~~~~~~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGN~vvlKps~~tp~t~~~l~~~~~~ 452 (715)
.... ... .+.. ..+...+++++|+|||++|+|| +|. +.+++++|||++||+||+|||+.+|.++.++++++++
T Consensus 78 ~~~~-~~~--~~~~--~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlKps~~~p~~~~~l~~~~~~ 152 (426)
T cd07087 78 MKPR-RVS--VPLL--LQPAKAYVIPEPLGVVLIIGPWNYPLQLALAPLIGAIAAGNTVVLKPSELAPATSALLAKLIPK 152 (426)
T ss_pred hCCc-ccC--Cccc--cCCCceEEEEecCcEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHH
Confidence 2110 000 0000 0123457789999999999998 586 6789999999999999999999999999999999986
Q ss_pred hcccccCcCceEEecCcchhhHhhcCCCCccEEEeecCHHHHHHHHhhc---CCCEEEecCCcceEEEcCCCCHHHHHHH
Q 005074 453 AIPDTVGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST---KIPVLGHADGICHVYVDKSANLDVAKNI 529 (715)
Q Consensus 453 al~~alP~gvv~vv~~~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a---~~~~~lElGGk~p~iV~~dADl~~A~~~ 529 (715)
.+|+|++|+++++.+.+..|.+|| +|+|+||||+++|+.|++.+ .||+++|||||||+||++|||+|.|++.
T Consensus 153 ----~~P~gv~~vv~g~~~~~~~l~~~~-v~~V~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~~~iV~~dadl~~aa~~ 227 (426)
T cd07087 153 ----YFDPEAVAVVEGGVEVATALLAEP-FDHIFFTGSPAVGKIVMEAAAKHLTPVTLELGGKSPCIVDKDANLEVAARR 227 (426)
T ss_pred ----hCCCCEEEEEeCCchHHHHHHhCC-CCEEEEeCChHHHHHHHHHHHhhCCceEEeccCCCceEecCCCCHHHHHHH
Confidence 599999999996445567777888 99999999999999998877 4899999999999999999999999999
Q ss_pred HHhhccCCCc-cccccceEEEcCcccCchhHHHHHHHHHhcCCe-----------------------------EecCccc
Q 005074 530 VIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGVG-----------------------------LFGGPRA 579 (715)
Q Consensus 530 iv~~~f~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~~-----------------------------~~g~~~~ 579 (715)
+++++|.|+| .|+|++|+|||+++| |+|+++|+++++++... +.|+...
T Consensus 228 i~~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~L~~~~~~l~~~~~~~~~~~gpli~~~~~~~~~~~i~~a~v~~gg~~~ 306 (426)
T cd07087 228 IAWGKFLNAGQTCIAPDYVLVHESIK-DELIEELKKAIKEFYGEDPKESPDYGRIINERHFDRLASLLDDGKVVIGGQVD 306 (426)
T ss_pred HHHHHHhccCCccccCCEEEEcHHHH-HHHHHHHHHHHHHHcCCCCccCCCcCCCCCHHHHHHHHHHHhcceEEeCCccC
Confidence 9999999987 999999999999999 79999999998876210 1122211
Q ss_pred -cc-cc-c-C-----CCCCCccccccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEecCHHHHHHHHHhcCcceEEEcC
Q 005074 580 -SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNA 650 (715)
Q Consensus 580 -~~-~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~i~t~d~~~~~~~~~~l~~G~V~iN~ 650 (715)
.+ ++ | | +++++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.++++++++|+|+||+
T Consensus 307 ~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~iN~ 386 (426)
T cd07087 307 KEERYIAPTILDDVSPDSPLMQEEIFGPILPILTYDDLDEAIEFINSRPKPLALYLFSEDKAVQERVLAETSSGGVCVND 386 (426)
T ss_pred CCCCEEeeEEEecCCCCCHHHhcccccceEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHhcCCcccEEECC
Confidence 12 33 5 2 35889999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCC--CCCCccCCcccccccccccccccccccccceEEEEEE
Q 005074 651 STRF--CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 691 (715)
Q Consensus 651 ~~~~--~~~~pfG~g~~sG~~~~~~~~~g~~gl~~ft~~K~v~ 691 (715)
++.. .+..||||.|.||+| +++|.+|+++||+.|+++
T Consensus 387 ~~~~~~~~~~PfGG~k~SG~G----~~~g~~~l~~~~~~k~~~ 425 (426)
T cd07087 387 VLLHAAIPNLPFGGVGNSGMG----AYHGKAGFDTFSHLKSVL 425 (426)
T ss_pred cccccCCCCCCCCCCCcccCC----CccCHHHHHHhccceeec
Confidence 7542 367899999999986 356899999999999874
No 113
>PRK10090 aldehyde dehydrogenase A; Provisional
Probab=100.00 E-value=3.4e-68 Score=585.50 Aligned_cols=353 Identities=19% Similarity=0.193 Sum_probs=297.8
Q ss_pred HHHHHHHHHHCHHHHHHHHHHHHHHHHhhchhHHHHHHhhcChhHHHHHHHHHHHHhccccc-ccccccccccCCCeEEE
Q 005074 319 LLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILE 397 (715)
Q Consensus 319 L~~~a~~l~~~~~~l~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~ 397 (715)
|++++++|++|+++|++++++|++|+. .++. .|+..+++.+++++.+.+. .+...+. ...+...+
T Consensus 1 L~~~a~~l~~~~~el~~~~~~e~Gk~~----~ea~--------~Ev~~~~~~~~~~a~~~~~~~~~~~~~--~~~~~~~~ 66 (409)
T PRK10090 1 LRKIAAGIRERASEISALIVEEGGKIQ----QLAE--------VEVAFTADYIDYMAEWARRYEGEIIQS--DRPGENIL 66 (409)
T ss_pred CHHHHHHHHHCHHHHHHHHHHhcCCCH----HHHH--------HHHHHHHHHHHHHHHHHHHhcCcccCC--CCCCceeE
Confidence 579999999999999999988775542 2222 2566666677766654432 2222211 11233567
Q ss_pred EeeeceeEEEEEcCC-Chh-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-cchhh
Q 005074 398 KTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIP 473 (715)
Q Consensus 398 ~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGN~vvlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~-~~~~~ 473 (715)
++++|+|||++|+|| ||. +.+++++|||++||+||+|||+.+|.|+..+++++.+ + ||+|++|+|++ +.+++
T Consensus 67 ~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~----aglP~gv~~~v~g~~~~~~ 142 (409)
T PRK10090 67 LFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDE----IGLPKGVFNLVLGRGETVG 142 (409)
T ss_pred EEEecccEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHH----cCCCcccEEEEeCCChhHH
Confidence 889999999999998 685 5679999999999999999999999999999999986 7 99999999996 66788
Q ss_pred HhhcCCCCccEEEeecCHHHHHHHHhhc---CCCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEE
Q 005074 474 DLLKLDDVIDLVIPRGSNKLVSQIKEST---KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLV 549 (715)
Q Consensus 474 ~~l~~~~~v~~v~fTGS~~~g~~i~~~a---~~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~f~n~g-~C~a~~rv~V 549 (715)
+.|..||++|+|+||||+.+|+.|++++ .||+++|||||||+||++|||+|.|++.+++|+|.|+| .|+|++|+||
T Consensus 143 ~~l~~~~~v~~V~ftGs~~~g~~v~~~aa~~~~~~~lElgGk~p~iV~~dADld~aa~~iv~~~f~~~GQ~C~a~~rv~V 222 (409)
T PRK10090 143 QELAGNPKVAMVSMTGSVSAGEKIMAAAAKNITKVCLELGGKAPAIVMDDADLDLAVKAIVDSRVINSGQVCNCAERVYV 222 (409)
T ss_pred HHHhcCCCcCEEEEECCHHHHHHHHHHHHhcCCeEEEECCCCCeEEEcCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEE
Confidence 8889999999999999999999998877 38999999999999999999999999999999999987 9999999999
Q ss_pred cCcccCchhHHHHHHHHHhcCC-----------------------------------eE-ecCccc--cc-cc-c-C---
Q 005074 550 HKDLACNGALNELVVELQHEGV-----------------------------------GL-FGGPRA--SK-LL-Q-I--- 585 (715)
Q Consensus 550 ~~~i~d~~f~~~l~~~~~~~~~-----------------------------------~~-~g~~~~--~~-~~-p-v--- 585 (715)
|+++| |+|+++|+++++++.. ++ .|+.+. .+ ++ | |
T Consensus 223 ~~~i~-~~f~~~l~~~~~~~~~G~p~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~ 301 (409)
T PRK10090 223 QKGIY-DQFVNRLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVALGGKAVEGKGYYYPPTLLLD 301 (409)
T ss_pred cHHHH-HHHHHHHHHHHHhcCCCCCCCcccCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEecEEEeC
Confidence 99999 7999999999987631 01 122211 12 23 5 2
Q ss_pred --CCCCCccccccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEecCHHHHHHHHHhcCcceEEEcCCCCCCCCCccCCc
Q 005074 586 --PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLG 663 (715)
Q Consensus 586 --~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~i~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~~~pfG~g 663 (715)
+++++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+........||||.
T Consensus 302 v~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~ 381 (409)
T PRK10090 302 VRQEMSIMHEETFGPVLPVVAFDTLEEAIAMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINRENFEAMQGFHAGW 381 (409)
T ss_pred CCCCCHHHhCCCCCceEEEEEECCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCc
Confidence 358999999999999999999999999999999999999999999999999999999999999998766666799999
Q ss_pred ccccccccccccccccccccceEEEEEEEcC
Q 005074 664 AEVGISTSRIHARGPVGVEGLLTTRWILRGN 694 (715)
Q Consensus 664 ~~sG~~~~~~~~~g~~gl~~ft~~K~v~~~~ 694 (715)
|+||+| +++|.+|+++||+.|++++.+
T Consensus 382 k~SG~G----~~~g~~gl~~f~~~k~v~~~~ 408 (409)
T PRK10090 382 RKSGIG----GADGKHGLHEYLQTQVVYLQS 408 (409)
T ss_pred ccccCC----ccchHHHHHHhcceEEEEEec
Confidence 999986 356999999999999998753
No 114
>TIGR02518 EutH_ACDH acetaldehyde dehydrogenase (acetylating).
Probab=100.00 E-value=2.1e-67 Score=589.78 Aligned_cols=384 Identities=19% Similarity=0.252 Sum_probs=313.6
Q ss_pred HhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhhchhHHHHHHhhcChhHHHHHHH
Q 005074 290 QVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAK 369 (715)
Q Consensus 290 ~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~i~~~~~ 369 (715)
.+|+++++++|++||+.|+++|.++|.++|++++++|++|+++|+++..+|.+++ ... +++. +......
T Consensus 7 ~~~v~~av~~A~~A~~~w~~~s~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~------~~~-~~~~----~~~~~~~ 75 (488)
T TIGR02518 7 IQQVRNLIRSAKVAQKKLANMTQEQIDKIVKAIVDAAYENAVKLAKMANEETGFG------KWE-DKVI----KNVFAAT 75 (488)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCC------hHH-HHHH----HHHHHHH
Confidence 6799999999999999999999999999999999999999999999777655443 211 2111 1112333
Q ss_pred HHHHHhcccccccccccccccCCCeEEEEeeeceeEEEEEcCC-Chhh-HHHHHHHHHHhCCEEEEeCCcchHHHHHHHH
Q 005074 370 SIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPDA-LVQIASLAIRSGNGLLLKGGKEAMRSNAILH 447 (715)
Q Consensus 370 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~~-~~~~~~~ALaaGN~vvlKps~~tp~t~~~l~ 447 (715)
.+.+++...+..|.... +.+...+.+++|+|||++|+|| ||.. ..+++++||++||+||+|||+.||.|+..++
T Consensus 76 ~~~~~~~~~~~~G~~~~----~~~~~~~~~~~PlGVV~~I~P~n~P~~~~~~k~~~AL~aGNaVIlKps~~a~~s~~~~~ 151 (488)
T TIGR02518 76 IVYDSIKDMKTIGILSE----DKEKKVIEIAVPVGVVAGLIPSTNPTSTAIYKTLISIKARNAIVFSPHPNAKKCIIETV 151 (488)
T ss_pred HHHHHHhhCcccceecC----CCCcceEEEEecceEEEEEcccCChHHHHHHHHHHHHHcCCcEEEECCccchHHHHHHH
Confidence 34433332233343211 2345567889999999999998 6964 5688999999999999999999999999999
Q ss_pred HHHHHhcccc-cCcCceEEecC-cchhhHhhcCCCCccEEEeecCHHHHHHHHhhcCCCEEEecCCcceEEEcCCCCHHH
Q 005074 448 KVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDV 525 (715)
Q Consensus 448 ~~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a~~~~~lElGGk~p~iV~~dADl~~ 525 (715)
++++++++++ +|+|+||+|++ +.+.++.|..||+||+|+||||+.+++.+ +.+.||+++|+|||+|+||++|||+|+
T Consensus 152 ~~l~~~l~eaGlP~gvv~~v~g~~~e~~~~L~~~~~vd~V~fTGs~~v~~~a-~~~~~pv~~e~gGn~p~iV~~dADld~ 230 (488)
T TIGR02518 152 KLMRKAAEEAGAPEGAIGCITVPTIEGTNELMKNKDTSLILATGGEAMVKAA-YSSGTPAIGVGPGNGPAYIERTANVKK 230 (488)
T ss_pred HHHHHHHHHcCcCcccEEEEcCCCHHHHHHHHhCCCcCEEEEeCCHHHHHHH-HHcCCCEEEEcCCCCeEEEeCCCCHHH
Confidence 9999999899 99999999995 55677777789999999999999999988 556899999999999999999999999
Q ss_pred HHHHHHhhccCCCc-cccccceEEEcCcccCchhHHHHHHH-------HHhcCCeE--e-c----Ccccc--------cc
Q 005074 526 AKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVE-------LQHEGVGL--F-G----GPRAS--------KL 582 (715)
Q Consensus 526 A~~~iv~~~f~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~-------~~~~~~~~--~-g----~~~~~--------~~ 582 (715)
|++.+++|+|+|+| +|+|.+|+|||++|| |+|+++|+++ .+++.+.- . . ++... .+
T Consensus 231 Aa~~iv~sk~~~~Gq~C~a~~rllV~~~i~-d~f~~~L~~~g~~~~~~~~~~~vg~~~~~~~~~~gp~i~~~~~~~i~~~ 309 (488)
T TIGR02518 231 AVRDIIDSKTFDNGTICASEQSIIVEECNK-DAVVEELKKQGGYFLTAEEAEKLGKFILRPNGTMNPQIVGKSPQVIANL 309 (488)
T ss_pred HHHHHHHHHhcCCCCCCCCCCEEEEeHHHH-HHHHHHHHHhhhhhcCHHHHHhhcccccCCCCCcCcccccchHHHHHHH
Confidence 99999999999876 999999999999999 7999999887 55543210 0 0 00000 00
Q ss_pred c----c------------C-CCCCCccccccCceEEEEEeCCHHHHHHHHHh----cCCCceeEEEecCHHHHHHHHHhc
Q 005074 583 L----Q------------I-PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQ----HGSAHTDCIVAEDQKVAETFLCQV 641 (715)
Q Consensus 583 ~----p------------v-~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~----~~~GL~a~i~t~d~~~~~~~~~~l 641 (715)
+ + + ++++ ++||+||||++|++|+|+||||+++|+ ++|||+++|||+|.+++++|++++
T Consensus 310 i~~av~~gakll~gg~~~v~~~~~-~~~E~fgPVl~v~~~~~~dEAI~~an~~i~~~~~Glta~I~T~d~~~a~~f~~~i 388 (488)
T TIGR02518 310 AGLTVPEDAKVLIGEQNGVGNKNP-YSREKLTTILAFYTEENWHEACELSIELLQNEGAGHTLIIHSENKDIVREFALKK 388 (488)
T ss_pred hccccCCCCEEEEeCCCCCCCCCc-cccCccCceEEEEEeCCHHHHHHHHHHhhhcCCCCCeEEEEeCCHHHHHHHHHhC
Confidence 0 1 1 1244 589999999999999999999999998 699999999999999999999999
Q ss_pred CcceEEEcC---------CCCCCCCCccCCcccccccccccccccccccccceEEEEEEEcCcc
Q 005074 642 DSAAVFHNA---------STRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGH 696 (715)
Q Consensus 642 ~~G~V~iN~---------~~~~~~~~pfG~g~~sG~~~~~~~~~g~~gl~~ft~~K~v~~~~~~ 696 (715)
++|+|+||. ++.+.+++.||+|.+.|+|++ .+.|+++|++.|+|.++..+
T Consensus 389 ~ag~V~VN~~~~~~~~Ga~t~~~~~~~~G~G~~~g~st~-----~~v~~~~l~~~k~v~~~~~~ 447 (488)
T TIGR02518 389 PVSRMLVNTGGSLGGIGATTNLVPAFTLGCGAVGGSSTS-----DNITPENLINIRRVAYGVRE 447 (488)
T ss_pred CeeEEEEcCCCcccccccccCCCccccccccccCCCcCC-----CCCCHHHhheeeEEEecccc
Confidence 999999994 445667778999999888764 38999999999999998743
No 115
>PRK11563 bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=6.5e-68 Score=616.81 Aligned_cols=396 Identities=18% Similarity=0.206 Sum_probs=321.5
Q ss_pred HHHHHcCCcceeEEecCCcccccHhhHHHHHHHHHHH-HHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
Q 005074 267 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARES-SRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQ 345 (715)
Q Consensus 267 l~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a-~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~ 345 (715)
..+|.+|+.++++..++ +|+++|+++|++| |+.|+++|..+|+++|++++++|++|+++|++ ++.|++|+.
T Consensus 23 ~~nP~tg~~i~~~~~~~-------~dv~~Av~~A~~A~~~~W~~~~~~eR~~~L~~~a~~l~~~~~ela~-l~~e~GK~~ 94 (675)
T PRK11563 23 LHDAVTGEPVARVSSEG-------LDFAAALAYAREVGGPALRALTFHERAAMLKALAKYLLERKEELYA-LSAQTGATR 94 (675)
T ss_pred ccCCCCCCEEEEEcCCc-------HHHHHHHHHHHHhhhhhhhcCCHHHHHHHHHHHHHHHHHhHHHHHH-HHHHhCCCH
Confidence 36788999999987655 4899999999998 79999999999999999999999999999998 465554331
Q ss_pred hhchhHHHHHHhhcChhHHHHHHHHHHHHhccccc---------ccccccccccCCCeEEEEeeece-eEEEEEcCC-Ch
Q 005074 346 EAGYAKSLVSRLALKPGKISSLAKSIRILADMEEP---------IGQILKRTELADGLILEKTSCPL-GVLLIVFES-RP 414 (715)
Q Consensus 346 ~~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~---------~g~~~~~~~~~~~~~~~~~~~Pl-GVV~~I~p~-~P 414 (715)
.++ ..|+...++.+++++...+. .|+..+.. .+.....++.++|+ |||++|+|| ||
T Consensus 95 ----~~a--------~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~p~~GVv~~I~PwNfP 161 (675)
T PRK11563 95 ----RDS--------WIDIEGGIGTLFTYASKGRRELPNDTVLVEGEVEPLS-KGGTFAGRHILTPLEGVAVHINAFNFP 161 (675)
T ss_pred ----HHH--------HHHHHHHHHHHHHHHHHHhhhccccccccCCcccccc-CCCcccceEEEeecCceEEEECCCchH
Confidence 122 12566666666666643311 12222210 01112246778997 999999999 58
Q ss_pred h-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecCcchhhHhhcCCCCccEEEeecCHH
Q 005074 415 D-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNK 492 (715)
Q Consensus 415 ~-~~~~~~~~ALaaGN~vvlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~v~~v~fTGS~~ 492 (715)
. +.+++++|||++||+||+||||.||+++..+++++.++ . +|+|++|+|+|. .++++..++++++|+||||++
T Consensus 162 ~~~~~~~i~pALaaGN~VV~KPse~tp~~a~~l~~~~~ea---G~~P~gv~~vv~g~--~~~~~~~~~~i~~v~FTGS~~ 236 (675)
T PRK11563 162 VWGMLEKLAPAFLAGVPAIVKPATATAYLTEAVVRLIVES---GLLPEGALQLICGS--AGDLLDHLDGQDVVTFTGSAA 236 (675)
T ss_pred HHHHHHHHHHHHHcCCeEEEECCCCCcHHHHHHHHHHHHc---CCCCCCcEEEeeCC--HHHHhhcCCCCCEEEEECcHH
Confidence 5 67899999999999999999999999999999999873 4 899999999863 233454456899999999999
Q ss_pred HHHHHHhhc-----CCCEEEecCCcceEEEcCCCC-----HHHHHHHHHhhccCCCc-cccccceEEEcCcccCchhHHH
Q 005074 493 LVSQIKEST-----KIPVLGHADGICHVYVDKSAN-----LDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNE 561 (715)
Q Consensus 493 ~g~~i~~~a-----~~~~~lElGGk~p~iV~~dAD-----l~~A~~~iv~~~f~n~g-~C~a~~rv~V~~~i~d~~f~~~ 561 (715)
+|++|++.+ .+|++||||||||+||++||| ||.|++.+++|+|.|+| +|+|++|+|||++|| |+|+++
T Consensus 237 ~G~~i~~~~~a~~~~~~~~lELGGknp~IV~~DAd~~~~dld~aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~-d~f~~~ 315 (675)
T PRK11563 237 TAQKLRAHPNVVANSVPFTAEADSLNAAILGPDATPGTPEFDLFVKEVVREMTVKAGQKCTAIRRAIVPRALV-DAVIEA 315 (675)
T ss_pred HHHHHHhhhhhhhCCceEEEecCCcCceEECCCCCcCchhHHHHHHHHHHHHHHhCCCccccceeEEeeHHHH-HHHHHH
Confidence 999998742 389999999999999999995 99999999999999987 999999999999999 799999
Q ss_pred HHHHHHhcCC---------------------------------e-EecCcc---------ccccc--c-C-----C--CC
Q 005074 562 LVVELQHEGV---------------------------------G-LFGGPR---------ASKLL--Q-I-----P--ET 588 (715)
Q Consensus 562 l~~~~~~~~~---------------------------------~-~~g~~~---------~~~~~--p-v-----~--~~ 588 (715)
|+++++++.+ + +.|+.. ..++| | | + .+
T Consensus 316 l~~~~~~l~vG~p~d~~t~~GPli~~~~~~~i~~~i~~a~~~a~vl~Gg~~~~~~~~~~~~~g~f~~PTvl~~v~~~~~~ 395 (675)
T PRK11563 316 LRARLAKVVVGDPRLEGVRMGALASLEQREDVREKVAALLAAAEIVFGGPDSFEVVGADAEKGAFFPPTLLYCDDPLEAP 395 (675)
T ss_pred HHHHHhcCccCCCCCCCCcccCCcCHHHHHHHHHHHHHHHhCCEEEECCcccccccCCCCCCCeeECCEEEeccCchhhh
Confidence 9999987632 1 124421 12333 6 3 2 24
Q ss_pred CCccccccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEecCHHHHHHHHHhcC--cceEEEcCCCC--------C-CCC
Q 005074 589 RLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVD--SAAVFHNASTR--------F-CDG 657 (715)
Q Consensus 589 ~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~i~t~d~~~~~~~~~~l~--~G~V~iN~~~~--------~-~~~ 657 (715)
++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++++++++ +|.||||+.+. . .+.
T Consensus 396 ~i~~eEiFGPVl~V~~~~~~~eai~~aN~s~~gL~asvft~d~~~a~~~~~~l~~~~G~v~iN~~~~~~~~~~~~~~~~~ 475 (675)
T PRK11563 396 AVHDVEAFGPVSTLMPYDDLDEAIELAARGKGSLVASLVTADPEVARELVLGAAPWHGRLLVLNRESAKESTGHGSPLPQ 475 (675)
T ss_pred hHhhccccCCceEEEecCCHHHHHHHHhcCCCCceEEEEeCCHHHHHHHHHHHHhcCCEEEEcCccccccccCCCCCCcC
Confidence 789999999999999999999999999999999999999999999999999997 99999997521 1 256
Q ss_pred CccCCccccccccccccc-ccccccccceEEEEEEEc
Q 005074 658 ARFGLGAEVGISTSRIHA-RGPVGVEGLLTTRWILRG 693 (715)
Q Consensus 658 ~pfG~g~~sG~~~~~~~~-~g~~gl~~ft~~K~v~~~ 693 (715)
+||||.|.||+|+ + +|.+|+++|++.|+|...
T Consensus 476 ~pfGG~k~SG~G~----~~~g~~~~~~f~~~k~~~~~ 508 (675)
T PRK11563 476 LVHGGPGRAGGGE----ELGGLRGVKHYMQRTAVQGS 508 (675)
T ss_pred CCcCCCCCCCCCc----cccchhHHHHhheeeeeecC
Confidence 8999999999863 3 368999999999998664
No 116
>cd07077 ALDH-like NAD(P)+-dependent aldehyde dehydrogenase-like (ALDH-like) family. The aldehyde dehydrogenase-like (ALDH-like) group of the ALDH superfamily of NAD(P)+-dependent enzymes which, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. This group includes families ALDH18, ALDH19, and ALDH20 and represents such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group.
Probab=100.00 E-value=1.9e-66 Score=572.57 Aligned_cols=382 Identities=21% Similarity=0.234 Sum_probs=321.0
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhhchhHHHHHHhhcChhHHHHHHHHHHHHhcc
Q 005074 298 VAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRILADM 377 (715)
Q Consensus 298 ~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 377 (715)
++|++||+.|+++|.++|.++|++++++|++|+++|++++.+|++++... ..+..++++.....++..+++.+++++..
T Consensus 1 ~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~-~~~~~~~~~~~~~~ev~~~~~~~~~~a~~ 79 (397)
T cd07077 1 ESAKNAQRTLAVNHDEQRDLIINAIANALYDTRQRLASEAVSERGAYIRS-LIANWIAMMGCSESKLYKNIDTERGITAS 79 (397)
T ss_pred ChHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-ccHHHHHHhCCcHHHHHHHHHHHHHHHHh
Confidence 36899999999999999999999999999999999999999999877432 22334455555667899999999998754
Q ss_pred ccc-ccccccccccCCCeEEEEeeeceeEEEEEcCC-ChhhHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcc
Q 005074 378 EEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIP 455 (715)
Q Consensus 378 ~~~-~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~~~~~~~~~ALaaGN~vvlKps~~tp~t~~~l~~~~~~al~ 455 (715)
... .+...+ .....+++++|+|||++|+|| +|...++++++||++||+||+|||+.+|+++..+++++.+++.
T Consensus 80 ~~~~~~~~~~-----~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~aL~aGN~vilKps~~~p~~~~~l~~~~~~~~~ 154 (397)
T cd07077 80 VGHIQDVLLP-----DNGETYVRAFPIGVTMHILPSTNPLSGITSALRGIATRNQCIFRPHPSAPFTNRALALLFQAADA 154 (397)
T ss_pred cCcccceEec-----CCCceEEEEecceEEEEEeCCCCchHHHHHHHHHHHcCCcEEEEcCcchhhHHHHHHHHHHHHhh
Confidence 322 222211 123567899999999999998 5755789999999999999999999999999999999998764
Q ss_pred cccCcCceEEecC-cchhhHhhcCCCCccEEEeecCHHHHHHHHhhcC-CCEEEecCCcceEEEcCCCCHHHHHHHHHhh
Q 005074 456 DTVGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK-IPVLGHADGICHVYVDKSANLDVAKNIVIDA 533 (715)
Q Consensus 456 ~alP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a~-~~~~lElGGk~p~iV~~dADl~~A~~~iv~~ 533 (715)
..+|++++|++++ +.+.+..|..||++|+|+||||+++|+.+++.+. +|+++|+|||+|+||++|||+|.|++.++++
T Consensus 155 ~g~p~~~v~~v~~~~~~~~~~l~~~~~vd~v~ftGs~~~~~~v~~~~~~~~~~~~~gg~~~~iv~~dad~~~a~~~~~~~ 234 (397)
T cd07077 155 AHGPKILVLYVPHPSDELAEELLSHPKIDLIVATGGRDAVDAAVKHSPHIPVIGFGAGNSPVVVDETADEERASGSVHDS 234 (397)
T ss_pred cCCCCceEEEecCCCHHHHHHHHcCCCCCEEEecCCHHHHHHHHHcCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHh
Confidence 3399999999985 5567777888999999999999999999988775 8999999999999999999999999999999
Q ss_pred ccCCCccccccceEEEcCcccCchhHHHHHHHHHhcCCeEecCccccccc-cCCCCCCccccccCceEEEEEeCCHH---
Q 005074 534 KIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLL-QIPETRLFHHEYNSMVCTVEIVDDVR--- 609 (715)
Q Consensus 534 ~f~n~g~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~~~~g~~~~~~~~-pv~~~~~~~eE~FGPVl~v~~~~~~d--- 609 (715)
+|.|+|.|+|++|+|||+++| |+|+++|++++++.|..+..+.+. .++ |.+++++++||+||||++|++|+|+|
T Consensus 235 ~~~~GQ~C~a~~~v~V~~~i~-d~~~~~l~~~~~~~G~~~~~g~~~-~~~~pt~~~~~~~~E~FgPvl~v~~~~~~~eai 312 (397)
T cd07077 235 KFFDQNACASEQNLYVVDDVL-DPLYEEFKLKLVVEGLKVPQETKP-LSKETTPSFDDEALESMTPLECQFRVLDVISAV 312 (397)
T ss_pred hccCCccCCCCeEEEEehhhh-HHHHHHHHHHHHhcCcCcCCCcee-eEEeccCCCChhhhhhhCceeEEEEEcchHHHH
Confidence 999944999999999999999 799999999998866654322111 112 23568899999999999999999996
Q ss_pred -HHHHHHHhcCCCceeEEEecCHHHHHHHHHhcCcceEEEcCCCCCC--CCCccCCcc--ccccccccccccc-cccccc
Q 005074 610 -AAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFC--DGARFGLGA--EVGISTSRIHARG-PVGVEG 683 (715)
Q Consensus 610 -eAi~~aN~~~~GL~a~i~t~d~~~~~~~~~~l~~G~V~iN~~~~~~--~~~pfG~g~--~sG~~~~~~~~~g-~~gl~~ 683 (715)
+|++++|+++|||++||||+|.+++.++++++++|+|+||+++... ..+||||.+ .||.+ +++| .+|+++
T Consensus 313 ~~ai~~~n~~~~gl~~~Ift~d~~~~~~~~~~l~~G~v~vN~~~~~~~~~~~~~gg~~~~~SG~g----~~~g~~~~~~~ 388 (397)
T cd07077 313 ENAWMIIESGGGPHTRCVYTHKINKVDDFVQYIDTASFYPNESSKKGRGAFAGKGVERIVTSGMN----NIFGAGVGHDA 388 (397)
T ss_pred HHHHHHHHhcCCCCceEEEeCCHHHHHHHHHhCCEEEEEEeCCccCCCccccCCCcceEEEcccc----CCCCCCCChHH
Confidence 6666889999999999999999999999999999999999987765 344555555 66664 4568 999999
Q ss_pred ceEEEEEE
Q 005074 684 LLTTRWIL 691 (715)
Q Consensus 684 ft~~K~v~ 691 (715)
|++.|+|+
T Consensus 389 ~~~~k~v~ 396 (397)
T cd07077 389 LRPLKRLV 396 (397)
T ss_pred hcceeEee
Confidence 99999986
No 117
>cd07129 ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydrogenase. Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids.
Probab=100.00 E-value=4.7e-67 Score=585.83 Aligned_cols=380 Identities=16% Similarity=0.166 Sum_probs=311.1
Q ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhhchhHHHHHHhhcChhHHHHHHHHHH
Q 005074 293 AREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIR 372 (715)
Q Consensus 293 v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~ 372 (715)
|++|+++|++||+.|+++|.++|.++|++++++|++++++|++++.+|++++.. ++ ..|+..+++.++
T Consensus 1 v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gkp~~----~~--------~~ev~~~~~~l~ 68 (454)
T cd07129 1 VDAAAAAAAAAFESYRALSPARRAAFLEAIADEIEALGDELVARAHAETGLPEA----RL--------QGELGRTTGQLR 68 (454)
T ss_pred ChHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChH----HH--------HHHHHHHHHHHH
Confidence 478999999999999999999999999999999999999999998776654321 11 124555555555
Q ss_pred HHhcccc---cccccccccc----cCCCeEEEEeeeceeEEEEEcCC-Chh-h--HHHHHHHHHHhCCEEEEeCCcchHH
Q 005074 373 ILADMEE---PIGQILKRTE----LADGLILEKTSCPLGVLLIVFES-RPD-A--LVQIASLAIRSGNGLLLKGGKEAMR 441 (715)
Q Consensus 373 ~~~~~~~---~~g~~~~~~~----~~~~~~~~~~~~PlGVV~~I~p~-~P~-~--~~~~~~~ALaaGN~vvlKps~~tp~ 441 (715)
+++...+ +.+....... ...+...+++++|+|||++|+|| +|. + .++++++||++||+||+|||+.+|.
T Consensus 69 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~a~ALaaGN~VVlKps~~~p~ 148 (454)
T cd07129 69 LFADLVREGSWLDARIDPADPDRQPLPRPDLRRMLVPLGPVAVFGASNFPLAFSVAGGDTASALAAGCPVVVKAHPAHPG 148 (454)
T ss_pred HHHHHHHhcCCccccccccccccCCCCCccceEEeeccceEEEECCCCCchhhhhhhhhHHHHHHcCCeEEEEcCCCCch
Confidence 5543221 1122111000 00122346789999999999998 685 3 3479999999999999999999999
Q ss_pred HHHHHHHHHHHhcccc-cCcCceEEecC-cchhhHhhcCCCCccEEEeecCHHHHHHHHhhcC-----CCEEEecCCcce
Q 005074 442 SNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK-----IPVLGHADGICH 514 (715)
Q Consensus 442 t~~~l~~~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a~-----~~~~lElGGk~p 514 (715)
++.++++++.+++.++ +|+|+||+|++ +.++++.|..||+|++|+||||+.+|+.|++++. ||+++|||||||
T Consensus 149 t~~~l~~~~~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~aa~~~~~~p~~lElGG~n~ 228 (454)
T cd07129 149 TSELVARAIRAALRATGLPAGVFSLLQGGGREVGVALVKHPAIKAVGFTGSRRGGRALFDAAAARPEPIPFYAELGSVNP 228 (454)
T ss_pred HHHHHHHHHHHHHHHhCCChhheEEeeCCcHHHHHHHhcCCCccEEEEeCChHHHHHHHHHhhccCccceeEeecCCcCc
Confidence 9999999999888889 99999999996 4467788888999999999999999999987653 799999999999
Q ss_pred EEEcCCC---CHHHHHHHHHhhccCCCc-cccccceEEEcCc-ccCchhHHHHHHHHHhcCC------------------
Q 005074 515 VYVDKSA---NLDVAKNIVIDAKIDYPA-ACNAMETLLVHKD-LACNGALNELVVELQHEGV------------------ 571 (715)
Q Consensus 515 ~iV~~dA---Dl~~A~~~iv~~~f~n~g-~C~a~~rv~V~~~-i~d~~f~~~l~~~~~~~~~------------------ 571 (715)
+||++|| |+|.|++.+++|+|.|+| +|+|++|+|||++ +| |+|+++|+++++++..
T Consensus 229 ~iV~~da~~~dl~~aa~~i~~~~~~~~GQ~C~a~~rv~v~~~~i~-d~f~~~l~~~~~~~~~g~~~~~~~~~~~~~~i~~ 307 (454)
T cd07129 229 VFILPGALAERGEAIAQGFVGSLTLGAGQFCTNPGLVLVPAGPAG-DAFIAALAEALAAAPAQTMLTPGIAEAYRQGVEA 307 (454)
T ss_pred EEEeCCcchHHHHHHHHHHHHHHhcCCCCeecCCceEEEeCcccH-HHHHHHHHHHHhccCCCCCcChHHHHHHHHHHHH
Confidence 9999999 899999999999999987 9999999999999 99 7999999999887632
Q ss_pred -------eEe-cCccc-cc-cc-c-C----C----CCCCccccccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEecC-
Q 005074 572 -------GLF-GGPRA-SK-LL-Q-I----P----ETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAED- 630 (715)
Q Consensus 572 -------~~~-g~~~~-~~-~~-p-v----~----~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~i~t~d- 630 (715)
+++ |+... .+ ++ | | + ++++++||+||||++|++|+|+||||+++|+++|||++||||+|
T Consensus 308 a~~~~ga~~l~gg~~~~~g~~~~Ptvl~~~~~~~~~~~i~~~E~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~vft~d~ 387 (454)
T cd07129 308 LAAAPGVRVLAGGAAAEGGNQAAPTLFKVDAAAFLADPALQEEVFGPASLVVRYDDAAELLAVAEALEGQLTATIHGEED 387 (454)
T ss_pred HHhcCCcEEEeCCCcCCCCCccCCEEEEccCCccccchhhcccCCCCeEEEEEeCCHHHHHHHHhcCCCCcEEEEEccCc
Confidence 222 33221 12 23 5 2 1 47899999999999999999999999999999999999999999
Q ss_pred -HHHHHHHHHhc--CcceEEEcCCCCCC---CCCccCC-cccccccccccccccccccccceEE
Q 005074 631 -QKVAETFLCQV--DSAAVFHNASTRFC---DGARFGL-GAEVGISTSRIHARGPVGVEGLLTT 687 (715)
Q Consensus 631 -~~~~~~~~~~l--~~G~V~iN~~~~~~---~~~pfG~-g~~sG~~~~~~~~~g~~gl~~ft~~ 687 (715)
.++++++++++ ++|+|+||.++... +.+|||| .+.||+|+ ....|++++++||++
T Consensus 388 ~~~~a~~~~~~l~~~~G~v~iN~~~~~~~~~~~~pfgG~~k~sg~g~--~~~~g~~~~~~~~~~ 449 (454)
T cd07129 388 DLALARELLPVLERKAGRLLFNGWPTGVEVCPAMVHGGPYPATTDPR--FTSVGTAAIERFLRP 449 (454)
T ss_pred hHHHHHHHHHHHHhhCcEEEECCCCccccccCCCCCCCCcCCCCCCc--cccccHHHHHHhccc
Confidence 89999999999 69999999765433 3789999 89998763 212489999999987
No 118
>cd07122 ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydrogenase (ACDH), ALDH family 20-like. Coenzyme A acylating aldehyde dehydrogenase (ACDH, EC=1.2.1.10), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA . The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH and may be critical enzymes in the fermentative pathway.
Probab=100.00 E-value=3e-66 Score=571.48 Aligned_cols=376 Identities=20% Similarity=0.247 Sum_probs=299.1
Q ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhhchhHHHHHHhhcChhHHHHHHH-HH
Q 005074 293 AREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAK-SI 371 (715)
Q Consensus 293 v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~i~~~~~-~~ 371 (715)
|++|+++|++||+.|+++|.++|.++|++++++|++|+++|++++++|++++. .++. ..++...++ .+
T Consensus 1 ~~~av~~A~~A~~~W~~~~~~eR~~~L~~~a~~l~~~~eela~~~~~E~Gk~~----~ea~-------~~e~~~~~~~~~ 69 (436)
T cd07122 1 VDELVERARKAQREFATFSQEQVDKIVEAVAWAAADAAEELAKMAVEETGMGV----VEDK-------VIKNHFASEYVY 69 (436)
T ss_pred ChHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCc----HHHH-------HHHHHHHHHHHH
Confidence 47899999999999999999999999999999999999999999887765442 1221 124555565 56
Q ss_pred HHHhcccccccccccccccCCCeEEEEeeeceeEEEEEcCC-Chh-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHH
Q 005074 372 RILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKV 449 (715)
Q Consensus 372 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGN~vvlKps~~tp~t~~~l~~~ 449 (715)
++++.. +..+.... ..+...+++|+|+|||++|+|| ||. +.+++++|||++||+||+|||+.||+|+..++++
T Consensus 70 ~~~~~~-~~~g~~~~----~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~~~~~ 144 (436)
T cd07122 70 NDIKDM-KTVGVIEE----DEEKGIVEIAEPVGVIAALIPSTNPTSTAIFKALIALKTRNAIIFSPHPRAKKCSIEAAKI 144 (436)
T ss_pred HHHhcC-cceeeecc----CCCCCeEEEeecccEEEEEeCCCCchHHHHHHHHHHHHcCCcEEEECCcchhhHHHHHHHH
Confidence 666542 22232211 1234567889999999999998 686 5678999999999999999999999999999999
Q ss_pred HHHhcccc-cCcCceEEecC-cchhhHhhcCCCCccEEEeecCHHHHHHHHhhcCCCEEEecCCcceEEEcCCCCHHHHH
Q 005074 450 ITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAK 527 (715)
Q Consensus 450 ~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a~~~~~lElGGk~p~iV~~dADl~~A~ 527 (715)
++++|.++ +|+|++|+|++ +.++++.|..||+||+|+||||+++++..+ ...+|+++|||||||+||++|||+|+|+
T Consensus 145 ~~~~l~eaG~P~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~v~~~a~-~~~~~~~~elgG~~p~iV~~dADl~~A~ 223 (436)
T cd07122 145 MREAAVAAGAPEGLIQWIEEPSIELTQELMKHPDVDLILATGGPGMVKAAY-SSGKPAIGVGPGNVPAYIDETADIKRAV 223 (436)
T ss_pred HHHHHHHcCCCchhEEEecCCChHHHHHHHcCCCcCEEEEcCCHHHHHHHH-hcCCCEEEecCCCCeEEEcCCCCHHHHH
Confidence 99988889 99999999996 556788888899999999999999988653 3479999999999999999999999999
Q ss_pred HHHHhhccCCCc-cccccceEEEcCcccCchhHHHHHHHHHhc-------C---------CeE---e-cCcc--c----c
Q 005074 528 NIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHE-------G---------VGL---F-GGPR--A----S 580 (715)
Q Consensus 528 ~~iv~~~f~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~-------~---------~~~---~-g~~~--~----~ 580 (715)
+.+++|+|.|+| .|++++|+|||++|| |+|+++|+++...+ . ..+ . +... . .
T Consensus 224 ~~i~~~~f~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~l~~~~~~~~v~~~~~~~~~~~gp~~~~~~~~~~~~~~~ 302 (436)
T cd07122 224 KDIILSKTFDNGTICASEQSVIVDDEIY-DEVRAELKRRGAYFLNEEEKEKLEKALFDDGGTLNPDIVGKSAQKIAELAG 302 (436)
T ss_pred HHHHHHhhccCCCCCCCCCEEEEechhH-HHHHHHHHHhcceecCHHHHHHHHHHhhcCCCCcCccccCcCHHHHHHHcC
Confidence 999999999987 999999999999999 79999999876543 0 000 0 1000 0 0
Q ss_pred cccc------------C-CCCCCccccccCceEEEEEeCCHHHHHHHHHhc----CCCceeEEEecCHHHHHHHHHhcCc
Q 005074 581 KLLQ------------I-PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQH----GSAHTDCIVAEDQKVAETFLCQVDS 643 (715)
Q Consensus 581 ~~~p------------v-~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~----~~GL~a~i~t~d~~~~~~~~~~l~~ 643 (715)
..++ + ++|+++ +|.||||++|++|+|+||||+++|++ +|||++||||+|.++++++++++++
T Consensus 303 ~~~~~ga~vl~~~~~~v~~~~~~~-~E~FGPVl~v~~~~~~~eAi~~aN~~~~~~~~GLsa~V~T~d~~~a~~~~~~l~a 381 (436)
T cd07122 303 IEVPEDTKVLVAEETGVGPEEPLS-REKLSPVLAFYRAEDFEEALEKARELLEYGGAGHTAVIHSNDEEVIEEFALRMPV 381 (436)
T ss_pred CCCCCCCeEEEEecCCCCCCCcch-hcccCCeEEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCHHHHHHHHhhCCc
Confidence 0111 1 246777 56799999999999999999999998 8999999999999999999999999
Q ss_pred ceEEEcCCCCCCCC------Ccc----CCcccccccccccccccccccccceEEEEEEE
Q 005074 644 AAVFHNASTRFCDG------ARF----GLGAEVGISTSRIHARGPVGVEGLLTTRWILR 692 (715)
Q Consensus 644 G~V~iN~~~~~~~~------~pf----G~g~~sG~~~~~~~~~g~~gl~~ft~~K~v~~ 692 (715)
|+||||.++.+..- +|+ |++...|.+ ..+..+.++|+++|+|.+
T Consensus 382 G~V~IN~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 435 (436)
T cd07122 382 SRILVNTPSSLGGIGDTYNGLAPSLTLGCGSWGGNS-----TSDNVGPKHLLNIKRVAY 435 (436)
T ss_pred eEEEEeCCccccccCccCCCCCceeeeeccccCCCc-----CCCCCChHHhheeEeecc
Confidence 99999988753211 221 222221111 123467889999998875
No 119
>PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed
Probab=100.00 E-value=1.4e-66 Score=625.60 Aligned_cols=385 Identities=18% Similarity=0.203 Sum_probs=331.1
Q ss_pred hHHHHHc-CCcceeEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
Q 005074 266 SIIKVLE-GKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAA 344 (715)
Q Consensus 266 ~l~~~~t-g~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~ 344 (715)
.+.+|.+ ++.+|++..++ .+||++|+++|++||+.|+.+|.++|+++|++++++|++|+++|+.++.+|.||+
T Consensus 662 ~v~nPa~~~~~vg~v~~a~------~~dv~~Av~aA~~A~~~W~~~p~~eRa~iL~r~Adlle~~~~eL~~l~~~EaGKt 735 (1318)
T PRK11809 662 PVINPADPRDIVGYVREAT------PAEVEQALESAVNAAPIWFATPPAERAAILERAADLMEAQMQTLMGLLVREAGKT 735 (1318)
T ss_pred EeECCCCCCeeEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHhCCC
Confidence 3577887 67889998888 8999999999999999999999999999999999999999999999988776543
Q ss_pred HhhchhHHHHHHhhcChhHHHHHHHHHHHHhcccccccccccccccCCCeEEEEeeeceeEEEEEcCC-Chh-hHHHHHH
Q 005074 345 QEAGYAKSLVSRLALKPGKISSLAKSIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIAS 422 (715)
Q Consensus 345 ~~~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~ 422 (715)
. .++ ..|++.+++.+++|+...+. .. . ...++|+|||++|+|| ||. +..++++
T Consensus 736 ~----~~A--------~~EV~eaidflryyA~~a~~---~~-------~---~~~~~PlGVV~~IsPWNFPlai~~g~ia 790 (1318)
T PRK11809 736 F----SNA--------IAEVREAVDFLRYYAGQVRD---DF-------D---NDTHRPLGPVVCISPWNFPLAIFTGQVA 790 (1318)
T ss_pred H----HHH--------HHHHHHHHHHHHHHHHHHHH---hc-------C---CceeecccEEEEECCCccHHHHHHHHHH
Confidence 2 122 34788999999999854321 00 0 2458999999999999 685 5678999
Q ss_pred HHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-cchhhHhhcCCCCccEEEeecCHHHHHHHHhh
Q 005074 423 LAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKES 500 (715)
Q Consensus 423 ~ALaaGN~vvlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~ 500 (715)
+||++||+||+|||++||+++..+++++++ + +|+|++|+|+| ++++++.|..||+|++|+||||+++|+.|++.
T Consensus 791 aALaAGN~VV~KPseqTpl~a~~lv~ll~e----AGlP~gvlqlv~G~g~~vg~~Lv~~p~V~~V~FTGSt~tg~~I~~~ 866 (1318)
T PRK11809 791 AALAAGNSVLAKPAEQTPLIAAQAVRILLE----AGVPAGVVQLLPGRGETVGAALVADARVRGVMFTGSTEVARLLQRN 866 (1318)
T ss_pred HHHHcCCeEEEeCCCCcHHHHHHHHHHHHH----hCcCcCeEEEeeCCcHHHHHHHhcCCCcCEEEEeCCHHHHHHHHHH
Confidence 999999999999999999999999999987 8 99999999996 66789999999999999999999999999876
Q ss_pred cC---------CCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccCchhHHHHHHHHHhcC
Q 005074 501 TK---------IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEG 570 (715)
Q Consensus 501 a~---------~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~f~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~ 570 (715)
++ +|+++|+|||||+||++|||+|+|++.+++|+|.|+| +|+|.+|+|||++|| |+|+++|+++++++.
T Consensus 867 aA~~l~~~g~~~pliaElGGkNa~IVdsdAdle~Av~~iv~sAF~~aGQrCsA~~rl~V~e~Ia-d~fl~~L~~a~~~l~ 945 (1318)
T PRK11809 867 LAGRLDPQGRPIPLIAETGGQNAMIVDSSALTEQVVADVLASAFDSAGQRCSALRVLCLQDDVA-DRTLKMLRGAMAECR 945 (1318)
T ss_pred HhhhcccccCceeEEEecCCccceEECCCCCHHHHHHHHHHHHHhcCCCccccCcEEEEcHHHH-HHHHHHHHHHHHhcC
Confidence 42 6999999999999999999999999999999999987 999999999999999 799999999998863
Q ss_pred Ce----------------------------------Ee-cCcc-----ccccc--c-C---CCCCCccccccCceEEEEE
Q 005074 571 VG----------------------------------LF-GGPR-----ASKLL--Q-I---PETRLFHHEYNSMVCTVEI 604 (715)
Q Consensus 571 ~~----------------------------------~~-g~~~-----~~~~~--p-v---~~~~~~~eE~FGPVl~v~~ 604 (715)
++ +. |+.. ..++| | | +++.+++||+|||||+|++
T Consensus 946 vGdP~~~~tdvGPvId~~a~~~i~~~I~~a~~~G~~v~~g~~~~~~~~~~G~fv~PTIi~~~~~~~l~eEiFGPVL~V~~ 1025 (1318)
T PRK11809 946 MGNPDRLSTDIGPVIDAEAKANIERHIQAMRAKGRPVFQAARENSEDWQSGTFVPPTLIELDSFDELKREVFGPVLHVVR 1025 (1318)
T ss_pred CCCcccccCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCCCCCCCCCCCeEEeeEEEeccchhhhcCcccCceEEEEE
Confidence 21 11 1100 11333 5 3 4567899999999999999
Q ss_pred eC--CHHHHHHHHHhcCCCceeEEEecCHHHHHHHHHhcCcceEEEcCCCCCC--CCCccCCcccccccccccccccccc
Q 005074 605 VD--DVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFC--DGARFGLGAEVGISTSRIHARGPVG 680 (715)
Q Consensus 605 ~~--~~deAi~~aN~~~~GL~a~i~t~d~~~~~~~~~~l~~G~V~iN~~~~~~--~~~pfG~g~~sG~~~~~~~~~g~~g 680 (715)
|+ |+||||+++|+++|||++||||+|.+++.++++++++|+||||+..... ...||||.+.||.|. +.+|+++
T Consensus 1026 ~~~~~ldeaI~~iN~t~yGLt~gV~Srd~~~~~~v~~~l~aGnvyINr~~~gavvg~qPFGG~g~SG~G~---kaGGp~y 1102 (1318)
T PRK11809 1026 YNRNQLDELIEQINASGYGLTLGVHTRIDETIAQVTGSAHVGNLYVNRNMVGAVVGVQPFGGEGLSGTGP---KAGGPLY 1102 (1318)
T ss_pred eCCCCHHHHHHHHhcCCCCceEEEEeCCHHHHHHHHHhCCEeEEEECCCCcCCCcCCCCCCCcCcCCCCC---CCCCHHH
Confidence 96 8999999999999999999999999999999999999999999866542 346999999888752 3579999
Q ss_pred cccceEEEE
Q 005074 681 VEGLLTTRW 689 (715)
Q Consensus 681 l~~ft~~K~ 689 (715)
+..|++.+.
T Consensus 1103 L~~f~~~~~ 1111 (1318)
T PRK11809 1103 LYRLLATRP 1111 (1318)
T ss_pred HHHHhccCC
Confidence 999999874
No 120
>PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed
Probab=100.00 E-value=4.3e-66 Score=623.51 Aligned_cols=415 Identities=18% Similarity=0.192 Sum_probs=345.5
Q ss_pred HHHHHHHHHHHHcCC-c-EEEEeCCC----cchHHHHHc-CCcceeEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCH
Q 005074 240 TAKVNAAYCAACAGI-P-VVITSGFA----MDSIIKVLE-GKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQS 312 (715)
Q Consensus 240 ~~Kl~aa~~a~~~gv-~-v~I~~g~~----~~~l~~~~t-g~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~ 312 (715)
..++++++...+... . -.|++|.. .-.+.+|.+ ++.+|++..++ ++++++|+++|++||+.|+.+|.
T Consensus 538 ~~~l~~al~~~~~~~~~~~~~i~g~~~~~~~~~v~nP~~~~~~vg~v~~a~------~~~v~~Av~aA~~A~~~W~~~~~ 611 (1208)
T PRK11905 538 LAALDEALNAFAAKTWHAAPLLAGGDVDGGTRPVLNPADHDDVVGTVTEAS------AEDVERALAAAQAAFPEWSATPA 611 (1208)
T ss_pred HHHHHHHHHHHHccCeeecceeccccccCCeeeEECCCCCCceEEEEeCCC------HHHHHHHHHHHHHHHHHhhhCCH
Confidence 445566666555432 1 22333321 122477888 88889999888 89999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhhchhHHHHHHhhcChhHHHHHHHHHHHHhcccccccccccccccCC
Q 005074 313 QDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRILADMEEPIGQILKRTELAD 392 (715)
Q Consensus 313 ~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 392 (715)
++|.++|++++++|++++++|++++.+|.+|.. .++ ..|++.+++.+++|+...+.. .
T Consensus 612 ~~Ra~iL~raAdll~~~~~eL~~l~~~E~GKt~----~ea--------~~Ev~eaid~lr~ya~~a~~~----~------ 669 (1208)
T PRK11905 612 AERAAILERAADLMEAHMPELFALAVREAGKTL----ANA--------IAEVREAVDFLRYYAAQARRL----L------ 669 (1208)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCH----HHH--------HHHHHHHHHHHHHHHHHHHHh----c------
Confidence 999999999999999999999999887665432 122 347888999999987543211 0
Q ss_pred CeEEEEeeeceeEEEEEcCC-Chh-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-
Q 005074 393 GLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS- 468 (715)
Q Consensus 393 ~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGN~vvlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~- 468 (715)
+ ...++|+|||++|+|| ||. +..+++++||++||+||+|||+.||+++..+++++++ + +|+|++|+|+|
T Consensus 670 ~---~~~~~P~GVv~~IsPwNfPlai~~g~i~aALaaGN~VV~KPse~tpl~a~~l~~ll~e----AGlP~gvl~lV~G~ 742 (1208)
T PRK11905 670 N---GPGHKPLGPVVCISPWNFPLAIFTGQIAAALVAGNTVLAKPAEQTPLIAARAVRLLHE----AGVPKDALQLLPGD 742 (1208)
T ss_pred C---CceecCccEEEEEcCCcCHHHHHHHHHHHHHHcCCEEEEeCCcccHHHHHHHHHHHHH----cCCCcccEEEeeCC
Confidence 0 1347899999999998 685 5678999999999999999999999999999999987 8 99999999996
Q ss_pred cchhhHhhcCCCCccEEEeecCHHHHHHHHhhcC------CCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cc
Q 005074 469 REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK------IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-AC 541 (715)
Q Consensus 469 ~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a~------~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~f~n~g-~C 541 (715)
++++++.|..||+|++|+||||+++|+.|++.++ +|+++|+|||||+||++|||+|+|++.+++|+|.|+| .|
T Consensus 743 g~~vg~~Lv~~p~v~~V~FTGSt~vg~~I~~~~A~~~~~~~pli~ElGGkN~~IV~~dAdle~Av~~iv~saF~~aGQ~C 822 (1208)
T PRK11905 743 GRTVGAALVADPRIAGVMFTGSTEVARLIQRTLAKRSGPPVPLIAETGGQNAMIVDSSALPEQVVADVIASAFDSAGQRC 822 (1208)
T ss_pred chHHHHHHHcCCCcCEEEEeCCHHHHHHHHHHHHhhcCCCCeEEEecCCcCeEEEcCCCCHHHHHHHHHHHHHhcCCCcc
Confidence 5668899999999999999999999999987652 7999999999999999999999999999999999987 99
Q ss_pred cccceEEEcCcccCchhHHHHHHHHHhcCCe----------------------------------Ee-cC-cc--ccccc
Q 005074 542 NAMETLLVHKDLACNGALNELVVELQHEGVG----------------------------------LF-GG-PR--ASKLL 583 (715)
Q Consensus 542 ~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~~----------------------------------~~-g~-~~--~~~~~ 583 (715)
+|++|+|||+++| |+|+++|+++++++.+. +. |+ +. ..++|
T Consensus 823 sA~~rl~V~~si~-d~f~e~L~~~~~~l~vGdP~d~~t~~GPvId~~a~~~i~~~I~~a~~~G~~l~~g~~~~~~~~G~f 901 (1208)
T PRK11905 823 SALRVLCLQEDVA-DRVLTMLKGAMDELRIGDPWRLSTDVGPVIDAEAQANIEAHIEAMRAAGRLVHQLPLPAETEKGTF 901 (1208)
T ss_pred ccCcEEEEehhHH-HHHHHHHHHHHHHhcCCCchhccCCccCccCHHHHHHHHHHHHHHHHCCCEEEEccCCCCCCCCeE
Confidence 9999999999999 79999999999887421 11 11 00 11233
Q ss_pred --c-C---CCCCCccccccCceEEEEEeC--CHHHHHHHHHhcCCCceeEEEecCHHHHHHHHHhcCcceEEEcCCCCCC
Q 005074 584 --Q-I---PETRLFHHEYNSMVCTVEIVD--DVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFC 655 (715)
Q Consensus 584 --p-v---~~~~~~~eE~FGPVl~v~~~~--~~deAi~~aN~~~~GL~a~i~t~d~~~~~~~~~~l~~G~V~iN~~~~~~ 655 (715)
| | +++.+++||+||||++|++|+ |+||||+++|+++|||++||||+|.+++.++++++++|+||||+.....
T Consensus 902 v~PTVl~~~~~~~~~eEiFGPVL~V~~y~~~dldeaI~~iN~t~yGLt~~I~S~d~~~~~~~~~~l~aGnvyIN~~~~ga 981 (1208)
T PRK11905 902 VAPTLIEIDSISDLEREVFGPVLHVVRFKADELDRVIDDINATGYGLTFGLHSRIDETIAHVTSRIRAGNIYVNRNIIGA 981 (1208)
T ss_pred EeeEEEecCChHHhcCCccCceEEEEEeCCCCHHHHHHHHhcCCCCceEEEEcCCHHHHHHHHHhCCEeEEEECCCCCCC
Confidence 5 3 457889999999999999997 7999999999999999999999999999999999999999999876543
Q ss_pred --CCCccCCcccccccccccccccccccccceEEEEEEEc
Q 005074 656 --DGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRG 693 (715)
Q Consensus 656 --~~~pfG~g~~sG~~~~~~~~~g~~gl~~ft~~K~v~~~ 693 (715)
...||||.|.||.|. +.+|++++.+|++.|++.+.
T Consensus 982 ~vg~qPFGG~~~SG~G~---kaGGp~~L~~f~~~k~v~~~ 1018 (1208)
T PRK11905 982 VVGVQPFGGEGLSGTGP---KAGGPLYLGRLVREAPTPIP 1018 (1208)
T ss_pred ccCCCCCCCCCCCCCCC---cCCCHHHHHHHhhcceeecc
Confidence 346999999998752 35799999999999999865
No 121
>cd07084 ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like. ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway.
Probab=100.00 E-value=1.4e-65 Score=571.55 Aligned_cols=375 Identities=14% Similarity=0.103 Sum_probs=306.8
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhhchhHHHHHHhhcChhHHHHHHHHHHH
Q 005074 294 REMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRI 373 (715)
Q Consensus 294 ~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~ 373 (715)
++|+++|++||+.|+++|.++|.++|++++++|++|+++|+.+++.|++++.+ . ..|+...++.+++
T Consensus 2 ~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~-----~--------~~ev~~~i~~~~~ 68 (442)
T cd07084 2 ERALLAADISTKAARRLALPKRADFLARIIQRLAAKSYDIAAGAVLVTGKGWM-----F--------AENICGDQVQLRA 68 (442)
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHcCCchh-----h--------hhhhcchHHHHHH
Confidence 57899999999999999999999999999999999999999998877654421 1 1244455555555
Q ss_pred Hhcccccc---cccccccccCCCeEEEEeeeceeEEEEEcCC-Chh-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHH
Q 005074 374 LADMEEPI---GQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHK 448 (715)
Q Consensus 374 ~~~~~~~~---g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGN~vvlKps~~tp~t~~~l~~ 448 (715)
++...+.. +..........+...+++++|+|||++|+|| +|. +.+++++|||++||+||+|||+.+|.++..+++
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~vvlKps~~~p~~~~~l~~ 148 (442)
T cd07084 69 RAFVIYSYRIPHEPGNHLGQGLKQQSHGYRWPYGPVLVIGAFNFPLWIPLLQLAGALAMGNPVIVKPHTAVSIVMQIMVR 148 (442)
T ss_pred HHHHHHhccccccccccCCCCccccceEEeecceeEEEEcCCccHhHHHHHHHHHHHHcCCeEEEECCCCchHHHHHHHH
Confidence 54322110 1100000000123457889999999999998 686 567899999999999999999999999999999
Q ss_pred HHHHhcccc-c-CcCceEEecCcchhhHhhcCCCCccEEEeecCHHHHHHHHhhcC-CCEEEecCCcceEEEcCCC-CHH
Q 005074 449 VITSAIPDT-V-GEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK-IPVLGHADGICHVYVDKSA-NLD 524 (715)
Q Consensus 449 ~~~~al~~a-l-P~gvv~vv~~~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a~-~~~~lElGGk~p~iV~~dA-Dl~ 524 (715)
++++ + + |+|++|+|++...++..|..||++++|+||||+++|+.|++.+. +|+++|||||||+||++|| |+|
T Consensus 149 ~l~~----ag~~P~g~~~~v~g~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~a~~~~v~lElgG~~~~iV~~dadd~~ 224 (442)
T cd07084 149 LLHY----AGLLPPEDVTLINGDGKTMQALLLHPNPKMVLFTGSSRVAEKLALDAKQARIYLELAGFNWKVLGPDAQAVD 224 (442)
T ss_pred HHHH----hCCCCccceEEeeCCcHHHHHHHcCCCCCEEEEECCHHHHHHHHHhccCCcEEEeccCcCcEEECCChhhHH
Confidence 9987 6 6 99999999964337888888999999999999999999999887 8999999999999999999 699
Q ss_pred HHHHHHHhhccCCCc-cccccceEEEcCc-ccCchhHHHHHHHHHhcCC--------------------------eE-ec
Q 005074 525 VAKNIVIDAKIDYPA-ACNAMETLLVHKD-LACNGALNELVVELQHEGV--------------------------GL-FG 575 (715)
Q Consensus 525 ~A~~~iv~~~f~n~g-~C~a~~rv~V~~~-i~d~~f~~~l~~~~~~~~~--------------------------~~-~g 575 (715)
.|++.+++++|.|+| .|+|++|+|||++ +| ++|+++|+++++++.+ .+ +|
T Consensus 225 ~a~~~i~~~~~~~~GQ~C~a~~rl~V~~~~i~-~~f~~~l~~~~~~~~~g~~~~gpl~~~~~~~~i~~a~~~gga~~~~g 303 (442)
T cd07084 225 YVAWQCVQDMTACSGQKCTAQSMLFVPENWSK-TPLVEKLKALLARRKLEDLLLGPVQTFTTLAMIAHMENLLGSVLLFS 303 (442)
T ss_pred HHHHHHHHHHhcccCCeecCCcEEEEeCCccH-HHHHHHHHHHHHhcccCccccChhhhHHHHHHHHHHHhcCCcEEEeC
Confidence 999999999999987 9999999999999 99 7999999998887621 12 23
Q ss_pred Cccc--------cc-cc-c-C-----CCC---CCccccccCceEEEEEeCC--HHHHHHHHHhcCCCceeEEEecCHHHH
Q 005074 576 GPRA--------SK-LL-Q-I-----PET---RLFHHEYNSMVCTVEIVDD--VRAAIDHIHQHGSAHTDCIVAEDQKVA 634 (715)
Q Consensus 576 ~~~~--------~~-~~-p-v-----~~~---~~~~eE~FGPVl~v~~~~~--~deAi~~aN~~~~GL~a~i~t~d~~~~ 634 (715)
+... .+ ++ | | +++ ++++||+||||++|++|+| +||||+++|+++|||++||||+|.+++
T Consensus 304 g~~~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~ 383 (442)
T cd07084 304 GKELKNHSIPSIYGACVASALFVPIDEILKTYELVTEEIFGPFAIVVEYKKDQLALVLELLERMHGSLTAAIYSNDPIFL 383 (442)
T ss_pred CcccccCCCCCcCCcccCCeEEEecCcccccchHHheeccCceEEEEEeCCccHHHHHHHHHhCCCCeeEEEEeCCHHHH
Confidence 3221 12 33 5 2 244 8999999999999999999 999999999999999999999999999
Q ss_pred HHHHHhc-CcceEEEcCC--CCCCCCCccCC-ccccccccccccc-ccccccccceEEEEE
Q 005074 635 ETFLCQV-DSAAVFHNAS--TRFCDGARFGL-GAEVGISTSRIHA-RGPVGVEGLLTTRWI 690 (715)
Q Consensus 635 ~~~~~~l-~~G~V~iN~~--~~~~~~~pfG~-g~~sG~~~~~~~~-~g~~gl~~ft~~K~v 690 (715)
+++++++ ++|+||||+. +...+..|||| ++.||+|. + +|.+++++||+...+
T Consensus 384 ~~~~~~l~~~G~v~iN~~~~~~~~~~~~~gG~~k~sG~g~----~~~g~~~~~~~~~~~~~ 440 (442)
T cd07084 384 QELIGNLWVAGRTYAILRGRTGVAPNQNHGGGPAADPRGA----GIGGPEAIKLVWRCHAE 440 (442)
T ss_pred HHHHHHHHhcCeEEECCCCCCCccccccCCCCCCCCCCCc----cccchHHhhheeeeeee
Confidence 9999999 9999999976 33344567776 56888753 3 388999999988654
No 122
>TIGR02288 PaaN_2 phenylacetic acid degradation protein paaN. This family includes sequences from Burkholderia, Bordetella, Streptomyces. Other PaaN enzymes are represented by a separate model, TIGR02278.
Probab=100.00 E-value=2.2e-65 Score=575.24 Aligned_cols=367 Identities=16% Similarity=0.146 Sum_probs=296.6
Q ss_pred HHHHcCCcceeEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH--
Q 005074 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQ-- 345 (715)
Q Consensus 268 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~-- 345 (715)
.+|++++.++++...+ .++++++|++||+.|+++++.+|.++|++++++|++|++||+.++++|.|++.
T Consensus 70 ~~P~t~~~~~~~~~~~---------~~~av~aA~~A~~~W~~~~~~~R~~vL~~~a~~l~~~~~elA~~~~~etGk~~~~ 140 (551)
T TIGR02288 70 RSPYGVELGVTYPQCD---------GDALLDAAHAALPGWRDAGARARAGVCLEILQRLNARSFEIAHAVMHTTGQAFMM 140 (551)
T ss_pred cCCCCCCEEEEEcCCC---------HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHhCCCHHH
Confidence 5688888888887666 38999999999999999999999999999999999999999999998876553
Q ss_pred --hhchhHHHHHHhhcChhHHHHHHHHHHHHhccc-ccccccc---ccc-ccCCCeEEEEeeeceeEEEEEcCC-Chh-h
Q 005074 346 --EAGYAKSLVSRLALKPGKISSLAKSIRILADME-EPIGQIL---KRT-ELADGLILEKTSCPLGVLLIVFES-RPD-A 416 (715)
Q Consensus 346 --~~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~g~~~---~~~-~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~ 416 (715)
+.|++ .+....++.++++++.. +..+... +.. ........++.++|+|||++|+|| ||. +
T Consensus 141 a~e~gkp-----------~~~~r~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vI~PwNfP~~~ 209 (551)
T TIGR02288 141 AFQAGGP-----------HAQDRGLEAVAYAYREMSRIPETAVWEKPQGKNDPLKLKKRFTIVPRGIALVIGCSTFPTWN 209 (551)
T ss_pred HHhccCh-----------HHHHHHHHHHHHHHHHHHhccCcccccccCCCCCcccccceEEEEecCeEEEEcCcccHHHH
Confidence 22221 12233344444443321 1112111 100 000011123478999999999998 686 5
Q ss_pred HHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC--cchhhHhhcCCCCccEEEeecCHHH
Q 005074 417 LVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS--REEIPDLLKLDDVIDLVIPRGSNKL 493 (715)
Q Consensus 417 ~~~~~~~ALaaGN~vvlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~--~~~~~~~l~~~~~v~~v~fTGS~~~ 493 (715)
..++++|||++||+||+|||+.||+++.++.+++.+++.++ ||+|+||+|++ +.++++.|..||+|++|+||||+++
T Consensus 210 ~~~~l~~ALaaGN~VVlKPs~~tpl~~~~~~~~l~e~l~eAGlP~gvv~lv~g~~g~~~~~~L~~~p~v~~I~FTGSt~~ 289 (551)
T TIGR02288 210 TYPGLFASLATGNPVLVKPHPGAILPLALTVQVAREVLGEAGFDPNLVTLAAFDPGHEAAQRLATDPAVRIIDFTGSNAF 289 (551)
T ss_pred HHHHHHHHHHcCCeEEEECCcccchhHHHHHHHHHHHHHHcCcChhHEEEecCCCcHHHHHHHHhCCCccEEEEECCHHH
Confidence 67999999999999999999999998886666666666679 99999999985 5668888999999999999999999
Q ss_pred HHHHHhhcC-CCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCc---------ccCchhHHHH
Q 005074 494 VSQIKESTK-IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKD---------LACNGALNEL 562 (715)
Q Consensus 494 g~~i~~~a~-~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~f~n~g-~C~a~~rv~V~~~---------i~d~~f~~~l 562 (715)
|+.|++.+. +|+++|||||||+||++|||||.|++.+++|+|.|+| .|++++|+|||++ +| |+|+++|
T Consensus 290 G~~I~~~aa~~~v~lElGGknp~IV~~dADld~aa~~i~~~~f~~sGQ~Cta~~ri~V~~~~i~~~~g~~i~-def~~~L 368 (551)
T TIGR02288 290 GQWLEQNARQAQVYTEKAGVNTVIIESTDDYKAMLRNLAFSLSLYSGQMCTTTQAILVPRDGIRTDQGRKSY-DEVAADL 368 (551)
T ss_pred HHHHHHhcccCcEEeecCCcCeEEEcCCCCHHHHHHHHHHHHHhhCCCCCCCCCEEEEeccccccccchhHH-HHHHHHH
Confidence 999998875 8999999999999999999999999999999999987 9999999999999 79 7999999
Q ss_pred HHHHHhcCC------------------------------eEecCccc-----cc--cc-c-C----C-CCCCccccccCc
Q 005074 563 VVELQHEGV------------------------------GLFGGPRA-----SK--LL-Q-I----P-ETRLFHHEYNSM 598 (715)
Q Consensus 563 ~~~~~~~~~------------------------------~~~g~~~~-----~~--~~-p-v----~-~~~~~~eE~FGP 598 (715)
+++++++ + .+.|+... .+ ++ | | + +|++++||+|||
T Consensus 369 ~~~~~~l-vGdp~~~~~~~Gplis~~~~~ri~~a~~~G~v~~gG~~~~~~~~~g~~~~~Ptvl~~~~~d~~i~~eE~FGP 447 (551)
T TIGR02288 369 ATAIDGL-LGDPARATAVLGAIQSPDTLARIAEARALGEVLLASTKIEHPEFPGARVRTPLLLKCDAADEAAYMQERFGP 447 (551)
T ss_pred HHHHHHh-cCCcccccccccCcCCHHHHHHHHHHHhCCCEEEcCccCCCCCCCCCEEeccEEEEcCCCCCHHHhCCCcCC
Confidence 9998876 1 01222211 12 23 4 2 2 678999999999
Q ss_pred eEEEEEeCCHHHHHHHHHhc--CCC-ceeEEEecCHHHHHHHHHhc----------CcceEEEcCCCCCCC
Q 005074 599 VCTVEIVDDVRAAIDHIHQH--GSA-HTDCIVAEDQKVAETFLCQV----------DSAAVFHNASTRFCD 656 (715)
Q Consensus 599 Vl~v~~~~~~deAi~~aN~~--~~G-L~a~i~t~d~~~~~~~~~~l----------~~G~V~iN~~~~~~~ 656 (715)
|++|++|+|+||||+++|++ +|| |++||||+|.++++++.+++ ++|.|+||.+..+.+
T Consensus 448 Vl~V~~~~d~deAi~~aN~~~~~~G~Lta~VfT~d~~~~~~~~~~~~~~~~~l~iN~~G~v~vN~~~~~~~ 518 (551)
T TIGR02288 448 IAFVVAVDDGAHAVELARRSVREKGAMTVGAYTTDPEVVDAVQEAAWDAAVALSLNLTGGVFVNQSAAFSD 518 (551)
T ss_pred EEEEEEECCHHHHHHHHhcCCCCCCCceEEEEeCCHHHHHHHHHHHHHhccCeeecCCceEEEccCCCCCC
Confidence 99999999999999999999 667 99999999999999999999 999999998764433
No 123
>PRK13805 bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional
Probab=100.00 E-value=2.4e-64 Score=602.69 Aligned_cols=386 Identities=17% Similarity=0.228 Sum_probs=313.8
Q ss_pred HhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhhchhHHHHHHhhcChhHHHHHHH
Q 005074 290 QVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAK 369 (715)
Q Consensus 290 ~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~i~~~~~ 369 (715)
.+||++++++|++||+.|+++|.++|.++|++++++|++|+++|++++.+|.|++. .++.. .+..+++.
T Consensus 11 ~~~v~~av~~A~~A~~~w~~~~~~~R~~il~~~a~~l~~~~~~la~~~~~EtGk~~----~e~~~-------~~~~~~~~ 79 (862)
T PRK13805 11 VAELDALVEKAKKAQEEFATFTQEQVDKIVRAAALAALDARIPLAKMAVEETGRGV----VEDKV-------IKNHFASE 79 (862)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCh----HHHHH-------HHHHHHHH
Confidence 78999999999999999999999999999999999999999999999887765542 12211 13344555
Q ss_pred HHHHHhcccccccccccccccCCCeEEEEeeeceeEEEEEcCC-Chh-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHH
Q 005074 370 SIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILH 447 (715)
Q Consensus 370 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGN~vvlKps~~tp~t~~~l~ 447 (715)
.++++....+..|.. .. +.+...+++++|+|||++|+|| ||. +.++++++||++||+||+|||+.||.|+..++
T Consensus 80 ~~~~~~~~~~~~g~~-~~---~~~~~~~~~~~P~GVv~~I~pwn~P~~~~~~~~~~ALaaGN~vVlKps~~a~~t~~~~~ 155 (862)
T PRK13805 80 YIYNSYKDEKTVGVI-EE---DDEFGIIEIAEPVGVIAGITPTTNPTSTAIFKALIALKTRNPIIFSFHPRAQKSSIAAA 155 (862)
T ss_pred HHHHHhcCCCccccc-Cc---CCCCCeEEEeecceEEEEEeCCCChhHHHHHHHHHHHHhCCcEEEECCcchHHHHHHHH
Confidence 555444322233321 11 1234567889999999999998 696 56789999999999999999999999999999
Q ss_pred HHHHHhcccc-cCcCceEEecC-cchhhHhhcCCCCccEEEeecCHHHHHHHHhhcCCCEEEecCCcceEEEcCCCCHHH
Q 005074 448 KVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDV 525 (715)
Q Consensus 448 ~~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a~~~~~lElGGk~p~iV~~dADl~~ 525 (715)
+++++++.++ +|+|+||+|++ +.+.++.|..||+||+|+||||+++++.. +...+|+++|+|||||+||++|||||+
T Consensus 156 ~l~~~~l~~aG~p~g~v~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~v~~~a-~~~~~pv~~e~gGk~p~iV~~dADl~~ 234 (862)
T PRK13805 156 KIVLDAAVAAGAPKDIIQWIEEPSVELTNALMNHPGIALILATGGPGMVKAA-YSSGKPALGVGAGNVPAYIDKTADIKR 234 (862)
T ss_pred HHHHHHHHHcCcCcccEEEecCCCHHHHHHHHcCCCccEEEecCCHHHHHHH-HhcCCCeEEECCCCCeEEEeCCCCHHH
Confidence 9999988889 99999999996 55677777789999999999999998766 345799999999999999999999999
Q ss_pred HHHHHHhhccCCCc-cccccceEEEcCcccCchhHHHHHHHHHhc-------------------CC--eEecCccc----
Q 005074 526 AKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHE-------------------GV--GLFGGPRA---- 579 (715)
Q Consensus 526 A~~~iv~~~f~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~-------------------~~--~~~g~~~~---- 579 (715)
|++.++||+|+|+| +|+|++|||||++|| |+|+++|+++...+ +. .++|+...
T Consensus 235 Aa~~i~~~k~~n~GQ~C~a~~~v~V~~~i~-d~f~~~l~~~g~~l~~~~~~~~v~~~i~~a~~~~~~~~~~g~~~~~~~~ 313 (862)
T PRK13805 235 AVNDILLSKTFDNGMICASEQAVIVDDEIY-DEVKEEFASHGAYFLNKKELKKLEKFIFGKENGALNADIVGQSAYKIAE 313 (862)
T ss_pred HHHHHHHhhhccCCCccCCCceEEEehhhH-HHHHHHHHHhCCeeCCHHHHHHHHHHHhhccCCCcCccccCCCHHHHHH
Confidence 99999999999876 999999999999999 79999997652110 00 12232110
Q ss_pred -cc-cc-c--------C----CCCCCccccccCceEEEEEeCCHHHHHHHHHh----cCCCceeEEEecCHHHHHHHHHh
Q 005074 580 -SK-LL-Q--------I----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQ----HGSAHTDCIVAEDQKVAETFLCQ 640 (715)
Q Consensus 580 -~~-~~-p--------v----~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~----~~~GL~a~i~t~d~~~~~~~~~~ 640 (715)
.+ ++ | + +++++++ |+||||++|++|+|+||||+++|+ ++|||+++|||+|.+++++|+++
T Consensus 314 ~~G~~~~p~~~~~i~~l~~v~~~~~~~~-E~fgPVl~v~~~~~~deAi~~~n~~~~~~~~gl~~~i~t~d~~~~~~~~~~ 392 (862)
T PRK13805 314 MAGFKVPEDTKILIAEVKGVGESEPLSH-EKLSPVLAMYKAKDFEDAVEKAEKLVEFGGLGHTAVIYTNDDELIKEFGLR 392 (862)
T ss_pred HcCCCCCCCCeEEEEecCCCCCCCcchh-cccCcEEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHhh
Confidence 01 12 2 2 2467666 799999999999999999999998 48999999999999999999999
Q ss_pred cCcceEEEcCCC----------CCCCCCccCCcccccccccccccccccccccceEEEEEEEcCcccc
Q 005074 641 VDSAAVFHNAST----------RFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHVV 698 (715)
Q Consensus 641 l~~G~V~iN~~~----------~~~~~~pfG~g~~sG~~~~~~~~~g~~gl~~ft~~K~v~~~~~~~~ 698 (715)
+++|+|+||.++ .+.+.+|||+ +.+|.+ ..+|+.|+++|++.|+|..+....+
T Consensus 393 l~~g~v~vN~~~~~~~~~~~~~~~~~~~~fG~-G~~g~~----~~~g~~g~~~~~~~k~v~~~~~~~~ 455 (862)
T PRK13805 393 MKACRILVNTPSSQGGIGDLYNKLAPSLTLGC-GSWGGN----SVSENVGAKHLLNIKTVAKRRENMQ 455 (862)
T ss_pred CCccEEEEeCCccccccccccCCcCccccccc-cCCCCC----cCCCCCCHHHhheeeeeeeccccce
Confidence 999999999986 4578889997 445543 2459999999999999987654443
No 124
>cd07127 ALDH_PAD-PaaZ Phenylacetic acid degradation proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida)-like. Phenylacetic acid degradation (PAD) proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida) are putative aromatic ring cleavage enzymes of the aerobic PA catabolic pathway. PaaZ mutants were defective for growth with PA as a sole carbon source due to interruption of the putative ring opening system. This CD is limited to bacterial monofunctional enzymes.
Probab=100.00 E-value=7.8e-62 Score=547.97 Aligned_cols=406 Identities=16% Similarity=0.124 Sum_probs=312.0
Q ss_pred HHHHcCCcceeEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhh
Q 005074 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 347 (715)
Q Consensus 268 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~ 347 (715)
.+|++++..+++. ..|+++++++|++||+.|+++++++|.++|++++++|++|+++|+++++.|+|++..
T Consensus 70 ~~P~~~~l~~~~~---------~adv~~ai~aA~~A~~~W~~~~~~~R~~il~~~a~~l~~~~~ela~a~~~e~Gk~~~- 139 (549)
T cd07127 70 VSPYGVELGVTYP---------QCDPDALLAAARAAMPGWRDAGARARAGVCLEILQRLNARSFEMAHAVMHTTGQAFM- 139 (549)
T ss_pred ECCCCCcEEEEEc---------hHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHCCCHH-
Confidence 4566666444442 348999999999999999999999999999999999999999999999887766542
Q ss_pred chhHHHHHHhhcChhHHHHHHHHHHHHhcccc-cccccc--ccccc--CCCeEEEEeeeceeEEEEEcCC-Chh-hHHHH
Q 005074 348 GYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQIL--KRTEL--ADGLILEKTSCPLGVLLIVFES-RPD-ALVQI 420 (715)
Q Consensus 348 g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~g~~~--~~~~~--~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~ 420 (715)
++.- .....+++..++.++++++... ..+... ..... +.....+..++|+|||++|+|| ||. .++.+
T Consensus 140 ---~a~q---a~~~~evd~a~e~~~~a~~~~~~~~~~~~w~~~~~~~~~l~~~k~~~~~P~GVv~vI~p~nfP~~~~~~~ 213 (549)
T cd07127 140 ---MAFQ---AGGPHAQDRGLEAVAYAWREMSRIPPTAEWEKPQGKHDPLAMEKTFTVVPRGVALVIGCSTFPTWNGYPG 213 (549)
T ss_pred ---HHHh---cccHHHHHHHHHHHHHHHHHHHhccccccccCCCCCcccccccceeEEecccEEEEEeCcCChHHHHHHH
Confidence 1110 0001245555555555443221 111100 00000 0001113467999999999998 675 45789
Q ss_pred HHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC--cchhhHhhcCCCCccEEEeecCHHHHHHH
Q 005074 421 ASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS--REEIPDLLKLDDVIDLVIPRGSNKLVSQI 497 (715)
Q Consensus 421 ~~~ALaaGN~vvlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~--~~~~~~~l~~~~~v~~v~fTGS~~~g~~i 497 (715)
+++||++||+||+|||+.+|+++.++.+++.++|.++ ||+|+||+|++ +.++++.|..||+|++|+||||+.+|+.|
T Consensus 214 i~~ALaaGN~VVvKPs~~a~ls~~~~~~~i~~~l~eAGlP~gvv~~v~g~~~~~~~~~L~~~p~v~~I~FTGS~~~G~~i 293 (549)
T cd07127 214 LFASLATGNPVIVKPHPAAILPLAITVQVAREVLAEAGFDPNLVTLAADTPEEPIAQTLATRPEVRIIDFTGSNAFGDWL 293 (549)
T ss_pred HHHHHhcCCeEEEECCcccchhHHHHHHHHHHHHHHcCcCcccEEEEeCCCcHHHHHHHHhCCCCCEEEEECCHHHHHHH
Confidence 9999999999999999999999988887777777789 99999999985 35688888899999999999999999999
Q ss_pred HhhcC-CCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCc---------ccCchhHHHHHHHH
Q 005074 498 KESTK-IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKD---------LACNGALNELVVEL 566 (715)
Q Consensus 498 ~~~a~-~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~f~n~g-~C~a~~rv~V~~~---------i~d~~f~~~l~~~~ 566 (715)
++.+. +|+++|||||||+||++|||++.|++.+++|+|.|+| .|++++|+|||++ +| |+|+++|++++
T Consensus 294 ~~~a~~~~v~~ElGGkn~~IV~~dADl~~aa~~i~~~~f~~sGQ~C~a~~ri~V~~s~i~~~~g~~i~-d~f~~~L~~~~ 372 (549)
T cd07127 294 EANARQAQVYTEKAGVNTVVVDSTDDLKAMLRNLAFSLSLYSGQMCTTPQNIYVPRDGIQTDDGRKSF-DEVAADLAAAI 372 (549)
T ss_pred HHHhccCcEEEecCCcCeEEECCCCCHHHHHHHHHHHHHccCCCCCCCCCEEEEECCccccccchhHH-HHHHHHHHHHH
Confidence 98875 8999999999999999999999999999999999987 9999999999999 89 79999999998
Q ss_pred HhcC-----------------------------CeEecCccc-----cc-cc--c-C-----CCCCCccccccCceEEEE
Q 005074 567 QHEG-----------------------------VGLFGGPRA-----SK-LL--Q-I-----PETRLFHHEYNSMVCTVE 603 (715)
Q Consensus 567 ~~~~-----------------------------~~~~g~~~~-----~~-~~--p-v-----~~~~~~~eE~FGPVl~v~ 603 (715)
+++- .-+.|+... .+ ++ | | +++++++||+||||++|+
T Consensus 373 ~~l~Gdp~~~~~~~Gpli~~~~~~ri~~a~~~g~vl~gg~~~~~~~~~g~~~~~Ptvl~~~~~d~~i~~eE~FGPVl~V~ 452 (549)
T cd07127 373 DGLLADPARAAALLGAIQSPDTLARIAEARQLGEVLLASEAVAHPEFPDARVRTPLLLKLDASDEAAYAEERFGPIAFVV 452 (549)
T ss_pred HHhcCCccccccccCCcCCHHHHHHHHHHHhCCCEEEcCCcCCCcCCCCceEEeCEEEEeCCCCCHHHcCCCcCceEEEE
Confidence 8751 001233211 12 22 6 2 368999999999999999
Q ss_pred EeCCHHHHHHHHHhcC--C-CceeEEEecCHHHHHHHHHh-cCcc-eEEEcCCCCCCCC--CccCCcccccccccccccc
Q 005074 604 IVDDVRAAIDHIHQHG--S-AHTDCIVAEDQKVAETFLCQ-VDSA-AVFHNASTRFCDG--ARFGLGAEVGISTSRIHAR 676 (715)
Q Consensus 604 ~~~~~deAi~~aN~~~--~-GL~a~i~t~d~~~~~~~~~~-l~~G-~V~iN~~~~~~~~--~pfG~g~~sG~~~~~~~~~ 676 (715)
+|+|.||||+++|++. | ||++||||+|.+.++++.++ .++| +++||........ .|||+.+.||... ..+
T Consensus 453 ~~~d~~eai~~an~~~~~~ggLt~sVfs~D~~~~~~~~~~~~~~~~~~~iN~tg~v~~~q~~~Fg~~~~sg~n~---~a~ 529 (549)
T cd07127 453 ATDSTDHSIELARESVREHGAMTVGVYSTDPEVVERVQEAALDAGVALSINLTGGVFVNQSAAFSDFHGTGANP---AAN 529 (549)
T ss_pred EeCCHHHHHHHHHhcccCCCCceEEEEcCCHHHHHHHHHHHHHhcCcEEEcCCceEEEecCcCCCCCCCCCCCc---ccc
Confidence 9999999999999984 4 69999999999999999997 7777 9999943322223 4599988777642 123
Q ss_pred cccccccceEEEEEEEc
Q 005074 677 GPVGVEGLLTTRWILRG 693 (715)
Q Consensus 677 g~~gl~~ft~~K~v~~~ 693 (715)
.....-.|...|..+++
T Consensus 530 ~~~~~~~fv~~r~~~~~ 546 (549)
T cd07127 530 AALTDGAFVANRFRVVQ 546 (549)
T ss_pred cccchhhhhhcceEEEE
Confidence 44566667766655443
No 125
>KOG2454 consensus Betaine aldehyde dehydrogenase [Energy production and conversion]
Probab=100.00 E-value=1.3e-63 Score=505.31 Aligned_cols=418 Identities=17% Similarity=0.190 Sum_probs=351.1
Q ss_pred HHHHcCCcceeEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhh
Q 005074 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 347 (715)
Q Consensus 268 ~~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~ 347 (715)
+.|.+|.-+|.++.-+ +.|+++-+..|++||++|.+.+..+|.+.|+.+.+.+.+|.|.+++...+|.+|.
T Consensus 69 ycPatg~yLG~fp~~~------~tdide~v~la~kAQktW~~ssF~~Rr~fL~~L~~yIi~nQdliaevacrDtGKT--- 139 (583)
T KOG2454|consen 69 YCPATGKYLGYFPALS------PTDIDERVTLARKAQKTWAQSSFKLRRQFLRILLKYIIENQDLIAEVACRDTGKT--- 139 (583)
T ss_pred ecCCCcceeeecccCC------hhhHHHHHHHHHHHHhhhhhccHHHHHHHHHHHHHHHhhchhheeeeeecccCch---
Confidence 6688899999998888 8899999999999999999999999999999999999999999998777766543
Q ss_pred chhHHHHHHhhcChhHHHHHHHHHHHHhcccc-cccccccccccCCCeEEEEeeeceeEEEEEcCC-Chh-hHHHHHHHH
Q 005074 348 GYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 424 (715)
Q Consensus 348 g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~A 424 (715)
+.++.+.++..+.+++.+++..-++|.+..+ +-+... .-.-.++.++|+||+++|.|| ||. -.+.++..|
T Consensus 140 -mvDAs~GEIlvTlEKI~Wtl~~Ger~L~P~~Rpn~~~~------~yKg~~v~yePLGVI~aiVsWNYPfHN~lgPiiaA 212 (583)
T KOG2454|consen 140 -MVDASLGEILVTLEKITWTLSEGERWLKPESRPNGRAM------LYKGSRVEYEPLGVIGAIVSWNYPFHNILGPIIAA 212 (583)
T ss_pred -hhhhhHhHHHHHHHHhhhhhhcchhhcCCcCCCchhhe------eeccceEEEeecceEEEeeecCCchhhhhhHHHHH
Confidence 3455556677777778877776666654321 211111 012246889999999999998 685 466889999
Q ss_pred HHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecCcchhhHhhcCCCCccEEEeecCHHHHHHHHhhcC-
Q 005074 425 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK- 502 (715)
Q Consensus 425 LaaGN~vvlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a~- 502 (715)
|-+||++|+|-||++.++.....|+++.+|... -||+++|++++-+++++.|.+|+.|++|.|.||..+++.|++.|+
T Consensus 213 lFsGNaIVvK~SE~~~WS~~fy~e~ir~~L~a~g~~p~LVq~itclpd~a~~ltSh~g~khitFiGSqpvak~i~~~AAk 292 (583)
T KOG2454|consen 213 LFSGNAIVVKVSEHASWSGCFYFEIIRAALAAVGAPPNLVQVITCLPDTAEALTSHSGVKHITFIGSQPVAKMIMRNAAK 292 (583)
T ss_pred HhcCCeEEEEeecceeeehhhHHHHHHHHHHHcCCCcchhheeecCcchHhHhhcCCCcceEEEecCcHHHHHHHHhhhh
Confidence 999999999999999999999999999988766 999999999987778999999999999999999999999998873
Q ss_pred --CCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccCchhHHHHHHHHHhcCC--------
Q 005074 503 --IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV-------- 571 (715)
Q Consensus 503 --~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~f~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~-------- 571 (715)
+|+++|||||+|+||++||||+..+..++.|-|..+| .|+..+|++||+++| |.|+..|-++++.+..
T Consensus 293 ~LTPv~lELGGKDafIi~dda~l~~v~si~mRGtfQSsGQNCiGiER~iv~k~~Y-d~~i~~l~~rv~s~r~G~~~~~~v 371 (583)
T KOG2454|consen 293 TLTPVTLELGGKDAFIICDDADLSHVASIAMRGTFQSSGQNCIGIERFIVHKDIY-DAFIGQLTKRVKSVRAGPPLTGRV 371 (583)
T ss_pred hcCcEEEeecCcccEEEeccccHHHHHHHHHhhhhhhcCCcccceeEEEEecchH-HHHHHHHHHHHHHHHcCCCccCcc
Confidence 8999999999999999999999999999999999887 999999999999999 7999999888876421
Q ss_pred --------------------------eE-ecCccc-------cccc-c---C---CCCCCccccccCceEEEEEeCCHHH
Q 005074 572 --------------------------GL-FGGPRA-------SKLL-Q---I---PETRLFHHEYNSMVCTVEIVDDVRA 610 (715)
Q Consensus 572 --------------------------~~-~g~~~~-------~~~~-p---v---~~~~~~~eE~FGPVl~v~~~~~~de 610 (715)
++ .||.|. ..|| | | ++|.|+|||.||||++|+++++.|+
T Consensus 372 DMGAm~s~nrfdhLesLv~DAv~KGArl~~gGsrF~Hpkyp~g~YF~PTlLvdvt~eMKIaqeE~FgPI~~im~ak~~eh 451 (583)
T KOG2454|consen 372 DMGAMCSQNRFDHLESLVNDAVDKGARLAVGGSRFGHPKYPVGQYFPPTLLVDVTHEMKIAQEEAFGPIMPIMQAKTDEH 451 (583)
T ss_pred chhhhhhccchHHHHHHHHHHHhhcchhhhcccccCCCCCCcccccCCeEEEecCchhhhHhhhccccchhhhhcCChHH
Confidence 11 122211 1233 3 2 3699999999999999999999999
Q ss_pred HHHHHHhcCCCceeEEEecCHHHHHHHHHhcCcceEEEcCCCCC-CCCCccCCcccccccccccccccccccccceEEEE
Q 005074 611 AIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRF-CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRW 689 (715)
Q Consensus 611 Ai~~aN~~~~GL~a~i~t~d~~~~~~~~~~l~~G~V~iN~~~~~-~~~~pfG~g~~sG~~~~~~~~~g~~gl~~ft~~K~ 689 (715)
+|++||+++|||.++||+.|.+++.+++.++++|+|.||+...+ .-.+||||.+.||+| +..|.+|++...+.|+
T Consensus 452 ~i~lAN~s~fgLG~sVFg~dk~~c~y~a~~lqtG~vAiNDFasfY~cQlPFGG~k~SGyG----rFaG~EGLrg~Cn~Ks 527 (583)
T KOG2454|consen 452 VIKLANDSRFGLGCSVFGGDKHRCKYIASQLQTGVVAINDFASFYMCQLPFGGVKDSGYG----RFAGIEGLRGCCNVKS 527 (583)
T ss_pred HHhhccCCcccccceeccccHHHHHHHHhhhhccceeehhhhhhheeccccCCccCCCcc----ccccHHHHHHHhcccc
Confidence 99999999999999999999999999999999999999997554 456999999999986 3468999999999999
Q ss_pred EEEcC-cccc-cCCCCcee
Q 005074 690 ILRGN-GHVV-DGDQGVVY 706 (715)
Q Consensus 690 v~~~~-~~~~-~~~~~~~~ 706 (715)
|.+.. .... .-+-++.|
T Consensus 528 v~yd~~~~~~t~ip~aldy 546 (583)
T KOG2454|consen 528 VAYDRVAENATEIPEALDY 546 (583)
T ss_pred eeccchhhhhccCCccccc
Confidence 98763 2222 33444444
No 126
>cd07078 ALDH NAD(P)+ dependent aldehyde dehydrogenase family. The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer
Probab=100.00 E-value=8e-61 Score=535.43 Aligned_cols=375 Identities=21% Similarity=0.255 Sum_probs=314.5
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhhchhHHHHHHhhcChhHHHHHHHHHHH
Q 005074 294 REMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRI 373 (715)
Q Consensus 294 ~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~ 373 (715)
++++++|++||+.|+++|.++|.++|++++++|.+++++|++++..|+++..+ +. ..+++.+++.+++
T Consensus 1 ~~av~~a~~a~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~etG~~~~----~~--------~~ei~~~i~~l~~ 68 (432)
T cd07078 1 DAAVAAARAAFKAWAALPPAERAAILRKLADLLEERREELAALETLETGKPIE----EA--------LGEVARAADTFRY 68 (432)
T ss_pred CHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH----HH--------HHHHHHHHHHHHH
Confidence 36889999999999999999999999999999999999999998877654321 11 1244455555554
Q ss_pred Hhccccc-ccccccccccCCCeEEEEeeeceeEEEEEcCC-Chh-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHH
Q 005074 374 LADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVI 450 (715)
Q Consensus 374 ~~~~~~~-~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGN~vvlKps~~tp~t~~~l~~~~ 450 (715)
++...+. .+..... ...+...+.+++|+|||++|+|| +|. ..++.+++||++||+||+|||+.+|.++..+.+++
T Consensus 69 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~AL~aGN~vilkps~~~~~~~~~l~~~l 146 (432)
T cd07078 69 YAGLARRLHGEVIPS--PDPGELAIVRREPLGVVGAITPWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALLLAELL 146 (432)
T ss_pred HHHHHHHhcCccccc--cCCCceEEEEEeecceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHH
Confidence 4432211 1211111 12244567889999999999998 685 57899999999999999999999999999999999
Q ss_pred HHhcccc-cCcCceEEecC-cchhhHhhcCCCCccEEEeecCHHHHHHHHhhcC---CCEEEecCCcceEEEcCCCCHHH
Q 005074 451 TSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK---IPVLGHADGICHVYVDKSANLDV 525 (715)
Q Consensus 451 ~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a~---~~~~lElGGk~p~iV~~dADl~~ 525 (715)
++ + +|+|+++++++ .++.+..|..|+++|+|+||||+.+|+.|++.+. +|+++|+|||+|+||++|||++.
T Consensus 147 ~~----ag~p~~~~~~~~~~~~~~~~~l~~~~~i~~v~ftGs~~~~~~v~~~a~~~~~~~~~e~gg~~~~iV~~~ad~~~ 222 (432)
T cd07078 147 AE----AGLPPGVLNVVTGDGDEVGAALASHPRVDKISFTGSTAVGKAIMRAAAENLKRVTLELGGKSPLIVFDDADLDA 222 (432)
T ss_pred HH----cCCCcCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhccCcEEEecCCCCeeEECCCCCHHH
Confidence 87 7 89999999995 4446777778999999999999999999988774 89999999999999999999999
Q ss_pred HHHHHHhhccCCCc-cccccceEEEcCcccCchhHHHHHHHHHhcCC---------------------------------
Q 005074 526 AKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV--------------------------------- 571 (715)
Q Consensus 526 A~~~iv~~~f~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~--------------------------------- 571 (715)
|++.+++++|.|+| .|++++++|||++++ ++|+++|+++++++..
T Consensus 223 aa~~i~~~~~~~~Gq~C~a~~~i~v~~~~~-~~~~~~L~~~l~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g 301 (432)
T cd07078 223 AVKGAVFGAFGNAGQVCTAASRLLVHESIY-DEFVERLVERVKALKVGNPLDPDTDMGPLISAAQLDRVLAYIEDAKAEG 301 (432)
T ss_pred HHHHHHHHHHhccCCCccCCceEEEcHHHH-HHHHHHHHHHHHccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCC
Confidence 99999999999987 999999999999999 7999999999886532
Q ss_pred -eE-ecCcccc---c-cc-c-C-----CCCCCccccccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEecCHHHHHHHH
Q 005074 572 -GL-FGGPRAS---K-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFL 638 (715)
Q Consensus 572 -~~-~g~~~~~---~-~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~i~t~d~~~~~~~~ 638 (715)
++ +|++... + ++ | | +++++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.+++++
T Consensus 302 ~~~~~gg~~~~~~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~~l~~~i~t~d~~~~~~~~ 381 (432)
T cd07078 302 AKLLCGGKRLEGGKGYFVPPTVLTDVDPDMPIAQEEIFGPVLPVIPFKDEEEAIELANDTEYGLAAGVFTRDLERALRVA 381 (432)
T ss_pred CEEEeCCccCCCCCCcEEccEEEecCCCCChhhhCCCcCceEEEEEeCCHHHHHHHHhCCCcCceEEEECCCHHHHHHHH
Confidence 12 2333221 2 33 5 2 35689999999999999999999999999999999999999999999999999
Q ss_pred HhcCcceEEEcCCCCC-CCCCccCCcccccccccccccccccccccceEEEEEE
Q 005074 639 CQVDSAAVFHNASTRF-CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 691 (715)
Q Consensus 639 ~~l~~G~V~iN~~~~~-~~~~pfG~g~~sG~~~~~~~~~g~~gl~~ft~~K~v~ 691 (715)
+++++|.|+||++... .+..||||.+.||+| +++|++|+++|++.|++.
T Consensus 382 ~~~~~g~v~iN~~~~~~~~~~pfgG~~~sg~g----~~~g~~~~~~~~~~k~v~ 431 (432)
T cd07078 382 ERLEAGTVWINDYSVGAEPSAPFGGVKQSGIG----REGGPYGLEEYTEPKTVT 431 (432)
T ss_pred HhcCcceEEECCCCCCCCCCCCcCCcCcCcCC----ccchHHHHHHhhceEEEE
Confidence 9999999999998777 778999999999885 357999999999999875
No 127
>COG0014 ProA Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism]
Probab=100.00 E-value=4.9e-59 Score=482.40 Aligned_cols=408 Identities=43% Similarity=0.732 Sum_probs=390.8
Q ss_pred hhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhhchhHHHHHHhhcChhHHHHHHHH
Q 005074 291 VGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKS 370 (715)
Q Consensus 291 ~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~ 370 (715)
.++.+..++|++|+...+.++.++|.+.|.++++.|+++.++|.+++.+|++.+++.|.++++++|+.++..+++.+++.
T Consensus 3 ~~~~~~~~~Ak~A~~~La~~st~~Kn~aL~a~A~~L~~~~~~IL~AN~~Dl~~are~gl~~~m~DRL~L~~~Ri~~ma~g 82 (417)
T COG0014 3 SELEELGKRAKAASRKLATLSTEEKNRALLAMADALEAARAEILAANAKDLAAARENGLSEAMLDRLALTPSRIEAMADG 82 (417)
T ss_pred hHHHHHHHHHHHHHHHHhhcChhhHHHHHHHHHHHHHHhHHHHHHhhHHHHHHHHHcCCcHHHHHHHcCCHHHHHHHHHH
Confidence 46778889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcccccccccccccccCCCeEEEEeeeceeEEEEEcCCChhhHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHH
Q 005074 371 IRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVI 450 (715)
Q Consensus 371 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~~P~~~~~~~~~ALaaGN~vvlKps~~tp~t~~~l~~~~ 450 (715)
++..+.+++|+|+....+..++|.+.+.+|.|+||+++|+...|++++...+.||++||+||||.+..+-.|...+.+++
T Consensus 83 l~~Va~L~DPvGev~~~~~~~nGL~i~~~rvPLGVigvIYEsRPnVtvdaaaLclKsGNAvILRGGsea~~Sn~ai~~~i 162 (417)
T COG0014 83 LRQVAALPDPVGEVIDGWTLPNGLQIYRVRVPLGVIGVIYESRPNVTVDAAALCLKSGNAVILRGGSEAIHSNAAIVEVI 162 (417)
T ss_pred HHHHhcCCCchHhhhccccCCCCCEEEEEEccceEEEEEEecCCccHHHHHHHHHhcCCEEEEeCcHHHhhhHHHHHHHH
Confidence 99999999999998877777889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcccc-cCcCceEEec--CcchhhHhhcCCCCccEEEeecCHHHHHHHHhhcCCCEEEecCCcceEEEcCCCCHHHHH
Q 005074 451 TSAIPDT-VGEKLIGLVT--SREEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAK 527 (715)
Q Consensus 451 ~~al~~a-lP~gvv~vv~--~~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a~~~~~lElGGk~p~iV~~dADl~~A~ 527 (715)
+++|.++ ||++.||+++ +.+.+.++|..+..||+|...||....+.|.+.+..||+..+-|++++||+++||+|+|.
T Consensus 163 ~~aL~~~~lP~~aVqli~~~~R~~v~~ll~l~~yiD~iIPRGg~~Li~~v~~~a~vPVi~~~~G~CHiyvd~~ADld~A~ 242 (417)
T COG0014 163 QEALEKAGLPADAVQLIEDTDREEVLELLRLDGYIDLVIPRGGAGLIRRVVENATVPVIEHGVGNCHIYVDESADLDKAL 242 (417)
T ss_pred HHHHHHcCCCHHHhhhccCCCHHHHHHHHhhcCceeEEEcCCcHHHHHHHHhCCcCCEEecCcceEEEEecccCCHHHHH
Confidence 9999999 9999999998 478899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhccCCCccccccceEEEcCcccCchhHHHHHHHHHhcCCeEecCcccccccc---C-CCCCCccccccCceEEEE
Q 005074 528 NIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLQ---I-PETRLFHHEYNSMVCTVE 603 (715)
Q Consensus 528 ~~iv~~~f~n~g~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~~~~g~~~~~~~~p---v-~~~~~~~eE~FGPVl~v~ 603 (715)
+.++++|......|++.+.++||+.++ ++|+.+|.+.+...|+++.|++....++| . .+...|..|+..++++|.
T Consensus 243 ~ii~nAKtqrPs~CNA~EtLLVh~~ia-~~fLp~l~~~l~~~gvelr~d~~~~~~~~~~~~~A~e~Dw~tEyLd~ilavk 321 (417)
T COG0014 243 KIIVNAKTQRPSVCNAAETLLVHRAIA-KSFLPKLANALQEAGVELRGDAEALALLPDAVKPATEEDWDTEYLDLILAVK 321 (417)
T ss_pred HHHHcccCCCCcccchHHHHHcCHHHH-HHhHHHHHHHHHhcCeEEEcCHHHHHhccccCCCCchhhHHHHhhhheeEEE
Confidence 999999999999999999999999999 89999999999999999998876655565 2 356789999999999999
Q ss_pred EeCCHHHHHHHHHhcCCCceeEEEecCHHHHHHHHHhcCcceEEEcCCCCCCCCCccCCccccccccccccccccccccc
Q 005074 604 IVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEG 683 (715)
Q Consensus 604 ~~~~~deAi~~aN~~~~GL~a~i~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~~~pfG~g~~sG~~~~~~~~~g~~gl~~ 683 (715)
.++++||||+++|.++.+||-+|.|+|...+++|.+++++-.||||.+++|.+++.||+|.+.|+|+++.|.+||.|+++
T Consensus 322 vVd~ld~AI~HIn~y~S~HsdaIiTe~~~~a~~F~~~VDSAaVyvNASTRFtDG~~fG~GaEiGISTqKlHARGPmGLe~ 401 (417)
T COG0014 322 VVDSLDEAIAHINTYGSGHSDAIITEDYANAERFVNEVDSAAVYVNASTRFTDGGQFGLGAEIGISTQKLHARGPMGLEA 401 (417)
T ss_pred EeCCHHHHHHHHHHhCCCCCcceeeCCHHHHHHHHhhcchheEEEecccccccCccccCceEEEeecCcccCCCCCChhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEEEEEcCccccc
Q 005074 684 LLTTRWILRGNGHVVD 699 (715)
Q Consensus 684 ft~~K~v~~~~~~~~~ 699 (715)
+|..|+++.+.+|+|+
T Consensus 402 LTs~Kyiv~G~Gqvr~ 417 (417)
T COG0014 402 LTSYKYIVRGDGQVRP 417 (417)
T ss_pred hcceeEEEeCCceecC
Confidence 9999999999999884
No 128
>cd06534 ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase superfamily. The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydri
Probab=100.00 E-value=4.6e-59 Score=510.20 Aligned_cols=355 Identities=22% Similarity=0.245 Sum_probs=301.0
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhhchhHHHHHHhhcChhHHHHHHHHHHHHhccc
Q 005074 299 AARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRILADME 378 (715)
Q Consensus 299 ~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 378 (715)
+|++||++|++++.++|.++|+++++.|.+++++|++++..|++++.. ++ ..|+...++.+++++...
T Consensus 2 ~a~~a~~~w~~~~~~~R~~~l~~l~~~l~~~~~~l~~~~~~e~Gk~~~----~~--------~~ev~~~~~~l~~~~~~~ 69 (367)
T cd06534 2 AARAAFKAWAALPPAERAAILRKIADLLEERREELAALETLETGKPIE----EA--------LGEVARAIDTFRYAAGLA 69 (367)
T ss_pred hHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHH----HH--------HHHHHHHHHHHHHHHHHH
Confidence 689999999999999999999999999999999999998877654321 11 124555555555544322
Q ss_pred cc-ccccccccccCCCeEEEEeeeceeEEEEEcCC-Chhh-HHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcc
Q 005074 379 EP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPDA-LVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIP 455 (715)
Q Consensus 379 ~~-~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~~-~~~~~~~ALaaGN~vvlKps~~tp~t~~~l~~~~~~al~ 455 (715)
+. .+...+ ....+...+++++|+|||++|+|| +|.+ .++++++||++||+||+|||+.+|.++..+++++.+
T Consensus 70 ~~~~~~~~~--~~~~~~~~~~~~~p~Gvv~~i~p~n~p~~~~~~~~~~aL~~GN~vilk~s~~~~~~~~~l~~~l~~--- 144 (367)
T cd06534 70 DKLGGPELP--SPDPGGEAYVRREPLGVVGVITPWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALALAELLQE--- 144 (367)
T ss_pred HHhcCCccc--ccCCCceeEEEEEeeeEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHh---
Confidence 11 111111 112345567889999999999998 5765 789999999999999999999999999999999986
Q ss_pred cc-cCcCceEEecC-cchhhHhhcCCCCccEEEeecCHHHHHHHHhhcC---CCEEEecCCcceEEEcCCCCHHHHHHHH
Q 005074 456 DT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK---IPVLGHADGICHVYVDKSANLDVAKNIV 530 (715)
Q Consensus 456 ~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a~---~~~~lElGGk~p~iV~~dADl~~A~~~i 530 (715)
+ +|+|+++++++ .++.++.|..|+++|+|+||||+++++.|.+.+. +|+++|+||+||+||++|||++.|++.+
T Consensus 145 -ag~p~~~v~~~~~~~~~~~~~l~~~~~vd~v~~tGs~~~~~~v~~~~~~~~~~~~~e~~g~~~~iV~~~ad~~~aa~~i 223 (367)
T cd06534 145 -AGLPPGVVNVVPGGGDEVGAALLSHPRVDKISFTGSTAVGKAIMKAAAENLKPVTLELGGKSPVIVDEDADLDAAVEGA 223 (367)
T ss_pred -cCCCcCeEEEEEcCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhcCCCeEEEEcCCCCeEEECCCCCHHHHHHHH
Confidence 7 89999999995 4447777788999999999999999999988774 8999999999999999999999999999
Q ss_pred HhhccCCCc-cccccceEEEcCcccCchhHHHHHHHHHhcCCeEecCccccccccCCCCCCccccccCceEEEEEeCCHH
Q 005074 531 IDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLQIPETRLFHHEYNSMVCTVEIVDDVR 609 (715)
Q Consensus 531 v~~~f~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~~~~g~~~~~~~~pv~~~~~~~eE~FGPVl~v~~~~~~d 609 (715)
++++|.++| .|+++++||||++++ |+|+++|+ .++.... +++++++||+||||++|++|+|+|
T Consensus 224 ~~~~~~~~gq~C~s~~~v~v~~~~~-~~f~~~l~--------tl~~~~~-------~~~~~~~~E~fgPv~~v~~~~~~~ 287 (367)
T cd06534 224 VFGAFFNAGQICTAASRLLVHESIY-DEFVEKLV--------TVLVDVD-------PDMPIAQEEIFGPVLPVIRFKDEE 287 (367)
T ss_pred HHHHHhcCCCCCCCCcEEEEcHHHH-HHHHHhhc--------eeeeCCC-------CCCccccCCccCceEEEEecCCHH
Confidence 999999977 999999999999999 79998887 2211100 245789999999999999999999
Q ss_pred HHHHHHHhcCCCceeEEEecCHHHHHHHHHhcCcceEEEcCCCCC-CCCCccCCcccccccccccccccccccccceEEE
Q 005074 610 AAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRF-CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTR 688 (715)
Q Consensus 610 eAi~~aN~~~~GL~a~i~t~d~~~~~~~~~~l~~G~V~iN~~~~~-~~~~pfG~g~~sG~~~~~~~~~g~~gl~~ft~~K 688 (715)
|||+++|++++||++||||+|...++++++++++|.|+||+++.. .+..||||.++||+|. ++|++++++||+.|
T Consensus 288 eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgg~~~sG~g~----~~g~~~~~~~~~~k 363 (367)
T cd06534 288 EAIALANDTEYGLTAGVFTRDLNRALRVAERLRAGTVYINDSSIGVGPEAPFGGVKNSGIGR----EGGPYGLEEYTRTK 363 (367)
T ss_pred HHHHHHhCCCCCCeEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCcccCccCC----CChHHHHHHhceEE
Confidence 999999999999999999999999999999999999999998877 7789999999999863 46899999999999
Q ss_pred EEE
Q 005074 689 WIL 691 (715)
Q Consensus 689 ~v~ 691 (715)
++.
T Consensus 364 ~i~ 366 (367)
T cd06534 364 TVV 366 (367)
T ss_pred EEe
Confidence 875
No 129
>KOG2452 consensus Formyltetrahydrofolate dehydrogenase [Nucleotide transport and metabolism]
Probab=100.00 E-value=2.3e-57 Score=468.82 Aligned_cols=379 Identities=15% Similarity=0.186 Sum_probs=307.7
Q ss_pred HHHcCCcceeEEecCCcccccHhhHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHh
Q 005074 269 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSR--RLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 346 (715)
Q Consensus 269 ~~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~ 346 (715)
+|.++..+..+..+. -.||++|+++|+.||. +|++++..+|.+.|.++++++++|+|||+.+...|-+..
T Consensus 443 np~~~~~ic~~~la~------v~dvd~av~aak~afe~g~w~~~sar~rg~~~y~la~lme~h~eelat~e~ldagav-- 514 (881)
T KOG2452|consen 443 NPTDGSVICQVSLAQ------VTDVDKAVAAAKGAFENGRWGKISARDRGRLMYRLADLMEQHQEELATIEALDAGAV-- 514 (881)
T ss_pred CCCCCCeeEEeehhH------hhhHHHHHHHHhhhhhcCcccccchhhhhhhhhhccchhhhccchhhhhhhccccce--
Confidence 344455555555555 6799999999999998 599999999999999999999999999998766554322
Q ss_pred hchhHHHHHHhhcChhHHHHHHHHHHHHhccccc-cccccccc-ccCCCeEEEEeeeceeEEEEEcCC-Chh-hHHHHHH
Q 005074 347 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRT-ELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIAS 422 (715)
Q Consensus 347 ~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~g~~~~~~-~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~ 422 (715)
++-++. ..+...++.+||+++|.+. .|..+|.. .+++...+.++++|+|||++|+|| ||+ +..||.+
T Consensus 515 --ytlalk-------thvgmsi~~~ryfagwcdkiqg~tipi~~arpn~nl~lt~~epigv~g~i~pwnyplmmlswk~a 585 (881)
T KOG2452|consen 515 --YTLALK-------THVGMSIQTFRYFAGWCDKIQGSTIPINQARPNRNLTLTRKEPVGVCGIIIPWNYPLMMLSWKTA 585 (881)
T ss_pred --eeeeeh-------hhcCceehHHHHhhhhhhhccCceeccccCCCCCcceeeecCcceeEEEeccCCchHHHHHHHHH
Confidence 111111 1334445566666666543 35554432 223445678899999999999999 685 5679999
Q ss_pred HHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccccCcCceEEecC-cchhhHhhcCCCCccEEEeecCHHHHHHHHhhc
Q 005074 423 LAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDTVGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST 501 (715)
Q Consensus 423 ~ALaaGN~vvlKps~~tp~t~~~l~~~~~~al~~alP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a 501 (715)
.+|++- ++ .++|+ .||+|+++| +..+++-|..||+|++|-|||||++|+.||++|
T Consensus 586 aclaa~---~~-----------k~~e~----------sgvini~~gsgslvg~rls~hpdvrkigftgsteig~~im~sc 641 (881)
T KOG2452|consen 586 ACLAAQ---VL-----------KFAEL----------TGVVNVLPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSC 641 (881)
T ss_pred HHHHHH---Hh-----------hhhhh----------cceEEEecCCcchhccccccCCccceeccccchHHHHHHHHHH
Confidence 888752 11 23332 489999995 788999999999999999999999999999998
Q ss_pred C----CCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccCchhHHHHHHHHHhcCCe----
Q 005074 502 K----IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGVG---- 572 (715)
Q Consensus 502 ~----~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~f~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~~---- 572 (715)
+ |++.|||||++|+||+.||||++|++....+.|+|-| .|+++.|+||.+||+ |+|+.+++++++++.+.
T Consensus 642 a~snikkvslelgg~sp~iifad~dl~kav~~~~~~vff~kgenciaagr~fi~~sih-d~fv~~~vee~~~~~ig~pld 720 (881)
T KOG2452|consen 642 AISNVKKVSLELGGESPFIIFADCDLNKAVQMGMSSVFFSKGENCIAAGRLFVEDSIH-DEFVRRVVEEVRKMKVGNPLD 720 (881)
T ss_pred hhcchheeeeeccCCCceEEEecCcHHHHHHhhccceeecCCcchhhhcceeehhhhh-HHHHHHHHHHHHhhccCCccc
Confidence 4 8999999999999999999999999999999999988 999999999999999 79999999999987431
Q ss_pred ------------------------------E-ecCccc--cc-cc-c-C-----CCCCCccccccCceEEEEEeC--CHH
Q 005074 573 ------------------------------L-FGGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVD--DVR 609 (715)
Q Consensus 573 ------------------------------~-~g~~~~--~~-~~-p-v-----~~~~~~~eE~FGPVl~v~~~~--~~d 609 (715)
+ +|+.+. .+ || | | +.|-+..||-||||+.|.+|+ |+|
T Consensus 721 r~t~hgpqnh~ahl~kl~ey~~~~v~~ga~~~~gg~~~~r~g~~f~pti~s~i~d~~f~a~eesfgpim~is~f~d~d~~ 800 (881)
T KOG2452|consen 721 RDTDHGPQNHHAHLVKLMEYCQHGVKEGATLVCGGNQVPRPGFFFEPTVFTDVEDHMFIAKEESFGPVMIISRFADGDLD 800 (881)
T ss_pred ccccCCchhHHHHHHHHHHHHHHHhccCcEEEECCccCCCCCcccCCeeecccchhhhhhhccccCceEEEEecCCCCHH
Confidence 1 233322 12 23 3 3 246788999999999999995 688
Q ss_pred HHHHHHHhcCCCceeEEEecCHHHHHHHHHhcCcceEEEcCCCCCCCCCccCCcccccccccccccccccccccceEEEE
Q 005074 610 AAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRW 689 (715)
Q Consensus 610 eAi~~aN~~~~GL~a~i~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~~~pfG~g~~sG~~~~~~~~~g~~gl~~ft~~K~ 689 (715)
+.++.+|+++|||+++|||+|..++.++++.+.+|+|+||.........||||.++||+|- ..|...+.+|...|+
T Consensus 801 ~vl~ran~tefgla~gvftrd~~k~l~v~~~l~agtvfvnty~ktdvaapfggfkqsgfgk----d~ge~alneyl~~kt 876 (881)
T KOG2452|consen 801 AVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFVNTYNKTDVAAPFGGFKQSGFGK----DLGEAALNEYLRVKT 876 (881)
T ss_pred HHHhhccccccccccceeecccchhhhhhhhhccceEEEeeccccccccCCCCcccccccc----chhHHHHhhheeeEE
Confidence 9999999999999999999999999999999999999999988888889999999999863 358899999999999
Q ss_pred EEEc
Q 005074 690 ILRG 693 (715)
Q Consensus 690 v~~~ 693 (715)
|.+.
T Consensus 877 it~e 880 (881)
T KOG2452|consen 877 VTFE 880 (881)
T ss_pred EEee
Confidence 9874
No 130
>COG4230 Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion]
Probab=100.00 E-value=2.4e-55 Score=463.68 Aligned_cols=385 Identities=19% Similarity=0.225 Sum_probs=323.0
Q ss_pred chHHHHHc-CCcceeEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
Q 005074 265 DSIIKVLE-GKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAA 343 (715)
Q Consensus 265 ~~l~~~~t-g~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~ 343 (715)
..+.+|.+ .+.+|++..++ ++|+++|++.|.+|++.|+.+|+.+|+.+|++++++++.+..+|..++.+|-+|
T Consensus 129 ~pV~nPad~~dvVG~V~ea~------~~~v~~A~~~A~~a~p~W~atp~~eRAaiL~raAdlme~~m~~L~~L~~REAGK 202 (769)
T COG4230 129 RPVINPADPDDIVGTVTEAT------EADVEQALEAAVAAAPIWSATPPAERAAILERAADLMEAQMPQLMGLLVREAGK 202 (769)
T ss_pred ccccCCCCHhHCeeeeeecC------HHHHHHHHHHHHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 34455555 34679998888 899999999999999999999999999999999999999999999988876655
Q ss_pred HHhhchhHHHHHHhhcChhHHHHHHHHHHHHhcccc-cccccccccccCCCeEEEEeeeceeEEEEEcCC-Chhh-HHHH
Q 005074 344 AQEAGYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPDA-LVQI 420 (715)
Q Consensus 344 ~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~~-~~~~ 420 (715)
+- +.+ +.|+++.++.|+||+...+ ..|. ..++|+|+|.+|+|| ||+- ....
T Consensus 203 tl----~na--------IAEVREAVDFlrYYA~~ar~~~g~--------------~~~~~~G~vVcISPWNFPLAIFtGq 256 (769)
T COG4230 203 TL----SNA--------IAEVREAVDFLRYYAGQARDTFGN--------------LTHRPLGPVVCISPWNFPLAIFTGQ 256 (769)
T ss_pred ch----hhH--------HHHHHHHHHHHHHHHHHHhcccCc--------------cccCCCCcEEEECCCCchHHHHHhH
Confidence 42 222 4589999999999986543 1111 236899999999999 6753 4468
Q ss_pred HHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecC-cchhhHhhcCCCCccEEEeecCHHHHHHHH
Q 005074 421 ASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIK 498 (715)
Q Consensus 421 ~~~ALaaGN~vvlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~ 498 (715)
++.||++||+|+-||+|+||+.+..-.+++++ + +|++++|+++| ++++|..|+.|++++.|.|||||+++|.|.
T Consensus 257 iaAAL~aGN~VlAKPAEqTpLIAa~aV~ll~e----AGvP~~~lqLLpG~G~tvGa~L~~darv~GV~FTGSTevA~li~ 332 (769)
T COG4230 257 IAAALAAGNSVLAKPAEQTPLIAAQAVRLLHE----AGVPPGVLQLLPGRGETVGAALTADARVAGVMFTGSTEVARLIQ 332 (769)
T ss_pred HHHHHHcCCccccCccccccHHHHHHHHHHHH----cCCChhhHHhcCCCCcccchhhhcCcccceEEEeCcHHHHHHHH
Confidence 99999999999999999999999999999997 8 99999999996 678999999999999999999999999997
Q ss_pred hhc----C--CCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccCchhHHHHHHHHHhcCC
Q 005074 499 EST----K--IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV 571 (715)
Q Consensus 499 ~~a----~--~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~f~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~ 571 (715)
++- + .|.+.|.||-|+||||.+|--|+++..++.|+|..+| +|++..-++++++++ |..++.|+-++.++.+
T Consensus 333 ~~LA~r~g~~~pLIAETGGqNAMIVDSsAL~EQVv~Dvl~SAFdSAGQRCSALRvLclQ~DvA-d~~l~mLKGAm~el~~ 411 (769)
T COG4230 333 RQLAKRQGRPIPLIAETGGQNAMIVDSSALAEQVVADVLASAFDSAGQRCSALRVLCLQEDVA-DRILTMLKGAMAELRV 411 (769)
T ss_pred HHHhhcCCCCCceEeccCCcceEEeechhhHHHHHHHHHHHHhhcccchhhhhhhhhhhhhHH-HHHHHHHHHHHHHhcc
Confidence 653 2 6899999999999999999999999999999999987 999999999999999 7999999999988743
Q ss_pred eE-------ecC---c-----------------c-----------ccc-cc-c-C---CCCCCccccccCceEEEEEeC-
Q 005074 572 GL-------FGG---P-----------------R-----------ASK-LL-Q-I---PETRLFHHEYNSMVCTVEIVD- 606 (715)
Q Consensus 572 ~~-------~g~---~-----------------~-----------~~~-~~-p-v---~~~~~~~eE~FGPVl~v~~~~- 606 (715)
.- +|. . + ..+ |+ | + ..-..++.|+|||||.|++|+
T Consensus 412 G~p~~l~tDVGPVIdaEAk~~i~~Hi~~mr~~gr~v~q~~~~~~~q~GtFv~Ptl~El~~~~eL~rEVFGPVLHVvRy~~ 491 (769)
T COG4230 412 GNPDRLTTDVGPVIDAEAKANIEKHIQTMRSKGRLVHQAAAPNSLQKGTFVAPTLIELENLDELQREVFGPVLHVVRYKR 491 (769)
T ss_pred CCccceeccccccccHHHHHHHHHHHHHHHhcccchhhccCCCccCCceeeCceeEEcCCHHHHHHHhccceeEEEEecH
Confidence 10 010 0 0 001 11 2 1 223457899999999999995
Q ss_pred -CHHHHHHHHHhcCCCceeEEEecCHHHHHHHHHhcCcceEEEcCCCCC--CCCCccCCccccccccccccccccccccc
Q 005074 607 -DVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRF--CDGARFGLGAEVGISTSRIHARGPVGVEG 683 (715)
Q Consensus 607 -~~deAi~~aN~~~~GL~a~i~t~d~~~~~~~~~~l~~G~V~iN~~~~~--~~~~pfG~g~~sG~~~~~~~~~g~~gl~~ 683 (715)
++|+.|+.+|.++|||+.+|||+..+.+.++.+++++|++|||..... ....||||-+-||.| ...+||..+..
T Consensus 492 ~~l~~vi~~INatGyGLT~GvHtRideti~~v~~~~~aGNlYVNRN~vGAVVGVQPFGG~GLSGTG---PKAGGp~YL~R 568 (769)
T COG4230 492 DELDEVIDQINATGYGLTLGVHTRIDETIAHVTERAHAGNLYVNRNIVGAVVGVQPFGGEGLSGTG---PKAGGPLYLLR 568 (769)
T ss_pred HHHHHHHHHHhccCcceeeeeecchHHHHHHHHhhccccceEeeccceeeEEeeccCCCCCCCCCC---CCCCChHHHHH
Confidence 899999999999999999999999999999999999999999987653 355799987766654 34679999988
Q ss_pred ceEEEE
Q 005074 684 LLTTRW 689 (715)
Q Consensus 684 ft~~K~ 689 (715)
|+..+.
T Consensus 569 l~~~~p 574 (769)
T COG4230 569 LVSERP 574 (769)
T ss_pred HHhcCC
Confidence 887665
No 131
>KOG4165 consensus Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism]
Probab=100.00 E-value=2e-50 Score=402.92 Aligned_cols=422 Identities=63% Similarity=0.969 Sum_probs=390.1
Q ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhhchhHHHHHHhhcChhHHHHHHHHHH
Q 005074 293 AREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIR 372 (715)
Q Consensus 293 v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~ 372 (715)
+++..+.||++++..+.++.++|.++|.+++++|+.+..+|.+++.+|+..+++.|+.++++.|+..+..++..+...++
T Consensus 2 ~e~~a~~aR~a~r~LqaLs~e~R~~il~~iad~L~~~~~~I~~aN~~Dla~Ake~GL~~sll~RL~l~~~K~~sl~~g~~ 81 (433)
T KOG4165|consen 2 VEEMAENAREAGRILQALSNEDRADILHHIADLLVDNEKEILAANKKDLAEAKEAGLAESLLKRLDLSPGKISSLAAGLR 81 (433)
T ss_pred HHHHHHHHHHHhhHHHhcChhhHHHHHHHHHHHHHhhHHHHHhcchhhHHHHHhcCccHHHHHHhcCChHHHHHHHHHHH
Confidence 35566789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcccccccccccccccCCCeEEEEeeeceeEEEEEcCCChhhHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHH
Q 005074 373 ILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITS 452 (715)
Q Consensus 373 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~~P~~~~~~~~~ALaaGN~vvlKps~~tp~t~~~l~~~~~~ 452 (715)
.++..++++|+........++...+.+..|+||.++|+...|.......+.|+++||.+++|....+..+...+.+++++
T Consensus 82 ~ia~~edpvGRVl~~~~ladgL~L~qvt~PiGvLLVIFESRPd~l~qiasLAi~SgN~llLKGGkEa~~Sn~~L~~~v~~ 161 (433)
T KOG4165|consen 82 QIAELEDPVGRVLKKTRLADGLELEQVTVPIGVLLVIFESRPDCLPQIASLAIASGNGLLLKGGKEAAHSNAALHKLVQE 161 (433)
T ss_pred HHHhcccchhhheeeeeccCCceEEEeeccceEEEEEeccCchHHHHHHHHHHhcCCeEeecCchhhhhhHHHHHHHHHH
Confidence 99998899998765444456777888899999999999999987777788899999999999999999999999999999
Q ss_pred hcccc-cCcCceEEecCcchhhHhhcCCCCccEEEeecCHHHHHHHHhhcCCCEEEecCCcceEEEcCCCCHHHHHHHHH
Q 005074 453 AIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVI 531 (715)
Q Consensus 453 al~~a-lP~gvv~vv~~~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a~~~~~lElGGk~p~iV~~dADl~~A~~~iv 531 (715)
++.+. .|.+.+|+|+..+++.++|..+..||+|...||+...|.|..++..||+..--|-+.+||++|||+++|.+...
T Consensus 162 al~~~~~~~~aV~LV~sREev~dLl~ld~~IDLvIPRGSs~LVr~Ik~~tkIPVLGHA~GichvYvd~dad~~kA~riv~ 241 (433)
T KOG4165|consen 162 ALGTHGGPGKAVQLVTSREEVSDLLKLDDYIDLVIPRGSSDLVRSIKDTTKIPVLGHAEGICHVYVDKDADLDKAKRIVR 241 (433)
T ss_pred HhhhccCchhhhhheecHHHHHHHhhhhhheeEEecCCcHHHHHHHhhcccCcccccccceeEEEeccccCHHHHHHHHh
Confidence 99888 89999999999999999999999999999999999999998888899999999999999999999999999999
Q ss_pred hhccCCCccccccceEEEcCcccCchhHHHHHHHHHhcCCeEecCccccccccC--CCCCCccccccCceEEEEEeCCHH
Q 005074 532 DAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLQI--PETRLFHHEYNSMVCTVEIVDDVR 609 (715)
Q Consensus 532 ~~~f~n~g~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~~~~g~~~~~~~~pv--~~~~~~~eE~FGPVl~v~~~~~~d 609 (715)
.++..+.-.|+|.+.++||++..-..|.+.|...++..|++++++++...+..+ +...-|+.|+-.-.++|-.+++.+
T Consensus 242 DaK~dYPAaCNAmETLLIh~dl~~~~~~~~l~~~l~~~gVtl~agpkl~~~l~~~p~e~~s~~~Ey~~l~~~ievV~~v~ 321 (433)
T KOG4165|consen 242 DAKCDYPAACNAMETLLIHKDLEQSPFFDDLINMLKEEGVTLHAGPKLAALLKFSPPEAKSFNTEYGSLECTIEVVDSVQ 321 (433)
T ss_pred cccCCCchhhhhHHHHhccHhhhhcchHHHHHHHHHhcCeEEecChhHHhhcCcCCchhhhhhhhhcchheeeeecccHH
Confidence 999999889999999999998431589999999999999999988875543324 345678899988899999999999
Q ss_pred HHHHHHHhcCCCceeEEEecCHHHHHHHHHhcCcceEEEcCCCCCCCCCccCCcccccccccccccccccccccceEEEE
Q 005074 610 AAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRW 689 (715)
Q Consensus 610 eAi~~aN~~~~GL~a~i~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~~~pfG~g~~sG~~~~~~~~~g~~gl~~ft~~K~ 689 (715)
+||..+|.++.+|+-+|.|+|.+.|++|.+++++..||+|.+++|.+++.||.|.+.|+|+++.|.+||.|++.++.+||
T Consensus 322 ~Ai~HI~~hgS~HTD~IvTe~~~~Ae~Fl~~VDSa~vf~NASTRFaDGfRfGlGaEVGIST~rIHARGPvGveGLlttkw 401 (433)
T KOG4165|consen 322 SAIDHIHTHGSSHTDCIVTENEATAEHFLKHVDSACVFHNASTRFADGFRFGLGAEVGISTSRIHARGPVGVEGLLTTKW 401 (433)
T ss_pred HHHHHHHhcCCcccceEEecCHHHHHHHHhccchhheeecccccccccccccccceeeeeccceeccCCccccceeeeee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCccccc---CCCCceeeeccccCC
Q 005074 690 ILRGNGHVVD---GDQGVVYTHKNLALQ 714 (715)
Q Consensus 690 v~~~~~~~~~---~~~~~~~~~~~~~~~ 714 (715)
+..+.+|+.. .+++.+|+|+++|++
T Consensus 402 ~lRG~gqvvsd~~~~G~~~y~H~~l~i~ 429 (433)
T KOG4165|consen 402 LLRGKGQVVSDFNEGGKRAYLHEDLPID 429 (433)
T ss_pred EEecCCceeccccCCCceeeeecCCChh
Confidence 9999999773 578999999999986
No 132
>KOG2453 consensus Aldehyde dehydrogenase [Energy production and conversion]
Probab=100.00 E-value=1.3e-51 Score=411.22 Aligned_cols=402 Identities=16% Similarity=0.186 Sum_probs=332.1
Q ss_pred HHcCCcceeEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHhhch
Q 005074 270 VLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGY 349 (715)
Q Consensus 270 ~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~d~~~~~~~g~ 349 (715)
|.+++.+..+..++ -+|.+.+++.|++|++.|...|..+|.++.+++.|.|+...+-|-+++..+|++-...
T Consensus 40 pann~pia~v~~as------v~dye~~~k~a~ea~kiw~~vpapkrgeivrqigdalr~klq~lg~lvslemgkilae-- 111 (507)
T KOG2453|consen 40 PANNSPIANVQNAS------VQDYEIAIKEAKEAYKIWCEVPAPKRGEIVRQIGDALRTKLQNLGKLVSLEMGKILAE-- 111 (507)
T ss_pred CCCCChhHHHhhcc------HHHHHHHHHHHHHHHHHHhcCCCCccchHHHHHHHHHHHHHHHHhhhhhhhhhhHhhh--
Confidence 44455555555555 7899999999999999999999999999999999999999999999888777654322
Q ss_pred hHHHHHHhhcChhHHHHHHHHHHHHhcccccc-cccccccccCCCeEEEEeeeceeEEEEEcCC-Chh-hHHHHHHHHHH
Q 005074 350 AKSLVSRLALKPGKISSLAKSIRILADMEEPI-GQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIR 426 (715)
Q Consensus 350 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALa 426 (715)
...|+++.++.+++..++.+.. |...|. . .++.....++.|+|+|++|+.+ +|. .--|.-+.|+.
T Consensus 112 ----------gvgevqeyvdicdyavglsr~l~g~i~ps-e-rpghalleqwnplg~vgvitafnfpcavygwnnaiaMv 179 (507)
T KOG2453|consen 112 ----------GVGEVQEYVDICDYAVGLSRSLEGKIFPS-E-RPGHALLEQWNPLGVVGVITAFNFPCAVYGWNNAIAMV 179 (507)
T ss_pred ----------cchhHHHHHHHHHHhhhhhhhhCCcccCC-C-CCchhHHHhcCCcceEEEEEeccCCceeeccCchhhhh
Confidence 2357888888888877776654 444443 2 2455566789999999999986 674 44566667899
Q ss_pred hCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecCcchhhHhhcCCCCccEEEeecCHHHHHHHHhhc---C
Q 005074 427 SGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST---K 502 (715)
Q Consensus 427 aGN~vvlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a---~ 502 (715)
+||+|++||++.+|+++....+++.+.|.+. +|++......|..+.+..+..+.+++.++||||+++||.+.+.- .
T Consensus 180 ~gncVvWKpApttpLtTiAvtklIaevL~qnnl~~aicsltcG~aDigrAaakdgRvnlvsftGssQvgKsvgq~vqarf 259 (507)
T KOG2453|consen 180 CGNCVVWKPAPTTPLTTIAVTKLIAEVLEQNNLPGAICSLTCGGADIGRAAAKDGRVNLVSFTGSSQVGKSVGQQVQARF 259 (507)
T ss_pred hcceeEecCCCCcceeHHHHHHHHHHHHhccCCCcceeeecccchhhhhhccccCceeecccccchhhhhHHHHHHHHHh
Confidence 9999999999999999999999999999988 99998888888778899999999999999999999999987654 3
Q ss_pred CCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccCchhHHHHHHHHHhcCCe-------E-
Q 005074 503 IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGVG-------L- 573 (715)
Q Consensus 503 ~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~f~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~~-------~- 573 (715)
-+.+|||||||+.||++||||..++...++++...+| +|+..+|++||+++| |+.+++|++++++..+. +
T Consensus 260 gk~llelggnnaiiv~edadl~lvvps~lfaavgtagqrctt~rrl~~hesvy-d~vlerlkkayaq~~ignpld~ntl~ 338 (507)
T KOG2453|consen 260 GKLLLELGGNNAIIVNEDADLNLVVPSTLFAAVGTAGQRCTTTRRLIVHESVY-DQVLERLKKAYAQFEIGNPLDSNTLI 338 (507)
T ss_pred hhHHHhhcCCceEEEeccccceeeehHHHHHHhcccccchhhhhHHHhhHHHH-HHHHHHHHHHHHheecCCcCCCCcee
Confidence 6789999999999999999999999999999999987 999999999999999 79999999988875321 1
Q ss_pred ---------------------------ecCc---cccccc-c-C----CCCCCccccccCceEEEEEeCCHHHHHHHHHh
Q 005074 574 ---------------------------FGGP---RASKLL-Q-I----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQ 617 (715)
Q Consensus 574 ---------------------------~g~~---~~~~~~-p-v----~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~ 617 (715)
+|+. +...|+ | | .+.++..+|.|.|||.|.+|++++|||++-|.
T Consensus 339 gplht~qav~~f~~~veeak~~ggki~yggkv~er~gnfveptivtl~hda~vv~~etfapilyvlkf~~~eea~ainne 418 (507)
T KOG2453|consen 339 GPLHTQQAVGKFKASVEEAKASGGKIEYGGKVLERDGNFVEPTIVTLKHDAPVVLRETFAPILYVLKFSTLEEAIAINNE 418 (507)
T ss_pred ccccCHHHHHHHHHHHHHHHhcCCeEEECCEeeccCCCcccceEEEecCCcchhhhhhccceeeEEeccchhhhheeccc
Confidence 1111 111122 4 2 35688999999999999999999999999999
Q ss_pred cCCCceeEEEecCHHHHHHHHH--hcCcceEEEcCCCCCC-CCCccCCcccccccccccccccccccccceEEEEEEEcC
Q 005074 618 HGSAHTDCIVAEDQKVAETFLC--QVDSAAVFHNASTRFC-DGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGN 694 (715)
Q Consensus 618 ~~~GL~a~i~t~d~~~~~~~~~--~l~~G~V~iN~~~~~~-~~~pfG~g~~sG~~~~~~~~~g~~gl~~ft~~K~v~~~~ 694 (715)
.+.||+++|||+|..++.++.- .-++|.|.||-++... -+..|||-++-|- +++.|..+-++|.+..+-++++
T Consensus 419 v~qglsssift~n~~nifrw~gpkgsdcgivnvniptsgaeiggafggek~tgg----gresgsdswkqymrrstctiny 494 (507)
T KOG2453|consen 419 VDQGLSSSIFTTNIQNIFRWMGPKGSDCGIVNVNIPTSGAEIGGAFGGEKETGG----GRESGSDSWKQYMRRSTCTINY 494 (507)
T ss_pred cccccchhhhhcCHHHHHhhhCCCCCccceEEecCCCCchhhcccccCccccCC----CcccCchHHHHHHhhceeeeec
Confidence 9999999999999999999885 6899999999988653 4567887776543 3466888889999887777776
Q ss_pred cc
Q 005074 695 GH 696 (715)
Q Consensus 695 ~~ 696 (715)
+.
T Consensus 495 sk 496 (507)
T KOG2453|consen 495 SK 496 (507)
T ss_pred cc
Confidence 64
No 133
>KOG2455 consensus Delta-1-pyrroline-5-carboxylate dehydrogenase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.6e-45 Score=380.00 Aligned_cols=387 Identities=17% Similarity=0.192 Sum_probs=297.4
Q ss_pred ceeEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH-HCHHHHHHHHHHHHHHHHhhchhHHHH
Q 005074 276 VGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALE-ANESLIKVENEADVAAAQEAGYAKSLV 354 (715)
Q Consensus 276 iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~-~~~~~l~~~~~~d~~~~~~~g~~~~~~ 354 (715)
+..+..++ ..+|++||++|.+|++.|..+|..+|.+|++|.|+++. +.+-+|..+.. ++.+|. .-++..
T Consensus 87 lA~~~yA~------~k~ie~AIkaAl~a~~~W~~~PiadR~aI~lkAAdlistkyr~~l~aatM--lgqgKt--~~qAei 156 (561)
T KOG2455|consen 87 LAKVYYAT------KKQIEKAIKAALSAQKTWELVPIADRLAIFLKAADLISTKYRYDLLAATM--LGQGKT--AIQAEI 156 (561)
T ss_pred hhheeecc------HHHHHHHHHHHHhhcCccccCcHHHHHHHHHHHHHHhcchHHHHHHHHHH--hcCCcc--hHHHHH
Confidence 34444555 88999999999999999999999999999999999998 66666654332 233332 112211
Q ss_pred HHhhcChhHHHHHHHHHHHHhcccc-cccccccccccCCCeEEEEeeece-eEEEEEcCCChh-hHHH-HHHHHHHhCCE
Q 005074 355 SRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPL-GVLLIVFESRPD-ALVQ-IASLAIRSGNG 430 (715)
Q Consensus 355 ~~~~~~~~~i~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~Pl-GVV~~I~p~~P~-~~~~-~~~~ALaaGN~ 430 (715)
.-+.+.++.+|..+.... ..... |... ..+......++|+ |-|++|+||+.. +... ..+|||+ ||+
T Consensus 157 -------Da~~eLidf~R~na~ya~eL~~~q-pi~~-~~~t~ns~~yRpleGFVaAisPFnftAI~gnLa~aPaLM-GN~ 226 (561)
T KOG2455|consen 157 -------DAAAELIDFFRFNAKYASELYAQQ-PISQ-TKGTWNSMEYRPLEGFVAAISPFNFTAIGGNLAGAPALM-GNV 226 (561)
T ss_pred -------HHHHHHHHHHHHhHHHHHHhhhcC-Cccc-cCCCCcceeeccccceeEEecccceeeeccccccChhhh-cce
Confidence 123345555554443221 11111 1111 2233444567888 999999998653 3333 4567775 999
Q ss_pred EEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEec-CcchhhHhhcCCCCccEEEeecCHHHHHHHHhhc-------
Q 005074 431 LLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVT-SREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST------- 501 (715)
Q Consensus 431 vvlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~-~~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a------- 501 (715)
|++|||..+.+++.++-++++| | ||+|++|.|+ ++...++.+..+|.+.++.||||+.+=|++...-
T Consensus 227 VLwkPS~ta~lssYii~~il~E----AGlP~GvinFvPad~~~f~dtita~~hfaglnftgS~~~fk~lwk~V~~n~~~Y 302 (561)
T KOG2455|consen 227 VLWKPSDTAALSSYIIYRILRE----AGLPPGVINFVPADGPLFGDTITASPHFAGLNFTGSVPTFKHLWKKVGENVDNY 302 (561)
T ss_pred eeecccchhHHHHHHHHHHHHH----cCCCccceeeccCCCCeecceeccCcccceeeeecccHHHHHHHHHHHhhhhhh
Confidence 9999999999999999999997 8 9999999999 5778899999999999999999999988886543
Q ss_pred --CCCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCc-cccccceEEEcCcccCchhHHHHHHHHHhcCCeE-----
Q 005074 502 --KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGVGL----- 573 (715)
Q Consensus 502 --~~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~f~n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~~~----- 573 (715)
.-+++.|.||||--+|.++||++.++...+.++|..+| .|+|.+|+||++++. +.+.++|+++-+++.+..
T Consensus 303 ~~fPrlvgEcgGkNFHfVH~SA~VesvV~~TvrsAfey~GQkcsA~SRmYvp~s~w-p~i~e~l~~~~~q~~igd~~~d~ 381 (561)
T KOG2455|consen 303 RTFPRLVGECGGKNFHFVHASADVESVVSSTVRSAFEYQGQKCSACSRMYVPESLW-PQIREELVEEHSQLKIGDPVIDF 381 (561)
T ss_pred hcchhhhccCCCcceEEeccccchHHHHHHHHHHHHhhcccccchhhhcccchhhc-HHHHHHHHHHHhhcccCCccccc
Confidence 25789999999999999999999999999999998876 999999999999999 899999988777653211
Q ss_pred --------------------------------ecCc--cccccc--c-C-----CCCCCccccccCceEEEEEeC--CHH
Q 005074 574 --------------------------------FGGP--RASKLL--Q-I-----PETRLFHHEYNSMVCTVEIVD--DVR 609 (715)
Q Consensus 574 --------------------------------~g~~--~~~~~~--p-v-----~~~~~~~eE~FGPVl~v~~~~--~~d 609 (715)
.||. ...++| | | |.+++|.||+|||||+|+-|+ +++
T Consensus 382 ~~f~gavIh~~sF~rl~k~le~ak~~~~leiL~GGk~DdS~G~FV~PTiv~~kdP~~pim~ee~fGPvLsVyvY~Dd~~~ 461 (561)
T KOG2455|consen 382 STFIGAVIHDKSFARLKKVLEHAKKDPELEILAGGKCDDSTGYFVEPTIVLSKDPKDPIMTEEIFGPVLSVYVYEDDKFD 461 (561)
T ss_pred cchhhhhccHHHHHHHHHHHHhhccCccceeeecCcccCCCCeeecceEEEccCCCcchhhhhccCceeEEEEeccccHH
Confidence 1221 112333 5 2 468999999999999999995 589
Q ss_pred HHHHHH-HhcCCCceeEEEecCHHHHHHHHH--hcCcceEEEcCCCCC--CCCCccCCcccccccccccccccccccccc
Q 005074 610 AAIDHI-HQHGSAHTDCIVAEDQKVAETFLC--QVDSAAVFHNASTRF--CDGARFGLGAEVGISTSRIHARGPVGVEGL 684 (715)
Q Consensus 610 eAi~~a-N~~~~GL~a~i~t~d~~~~~~~~~--~l~~G~V~iN~~~~~--~~~~pfG~g~~sG~~~~~~~~~g~~gl~~f 684 (715)
|++.++ |.++|||+.+||++|.+..++..+ +..+|+.|||+-++. ....||||.+.||... ..+|++-+..|
T Consensus 462 E~l~lv~~tt~YaLTGaiFaqd~~vv~~a~~~Lr~aAgNfYiNdKcTGsvvgqqpFGGaR~SGTND---KaGgp~~l~Rw 538 (561)
T KOG2455|consen 462 EVLKLVDNTTPYALTGAIFAQDREVVLHALDVLRMAAGNFYINDKCTGSVVGQQPFGGARLSGTND---KAGGPHYLLRW 538 (561)
T ss_pred HHHHHHhcCCcceeccccccccHHHHHHHHHHHHhhhcceEEccccccceeeccccCcccccCCCC---CCCCceEEEee
Confidence 999998 678999999999999999998887 567999999986543 3567999999998742 34688878788
Q ss_pred eEEEEE
Q 005074 685 LTTRWI 690 (715)
Q Consensus 685 t~~K~v 690 (715)
+.+++|
T Consensus 539 tSp~~i 544 (561)
T KOG2455|consen 539 TSPLSI 544 (561)
T ss_pred cCcchh
Confidence 877764
No 134
>COG0263 ProB Glutamate 5-kinase [Amino acid transport and metabolism]
Probab=100.00 E-value=2.4e-41 Score=346.71 Aligned_cols=256 Identities=42% Similarity=0.660 Sum_probs=232.6
Q ss_pred hcccceEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhcccCCCcccccCccccc
Q 005074 11 VKDVKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNEL 90 (715)
Q Consensus 11 ~~~~k~~VIKiGGs~l~~~~~~~~~~~l~~l~~~I~~l~~~G~~vviVhGgg~~i~~~~l~~~~~~~~~~~~~~~~~~~l 90 (715)
+++.+++|||+|.|+++++++.++...+..++++|+.|++.|+++|||.||+...|...++.... +..+..
T Consensus 3 ~~~~~riVvKiGSs~Lt~~~g~l~~~~l~~l~~~ia~L~~~G~eVilVSSGAiaaG~~~Lg~~~r----p~~l~~----- 73 (369)
T COG0263 3 LSSARRIVVKIGSSSLTDGTGGLDRSKLEELVRQVAALHKAGHEVVLVSSGAIAAGRTRLGLPKR----PKTLAE----- 73 (369)
T ss_pred CCcceEEEEEECcceeeCCCCCcCHHHHHHHHHHHHHHHhCCCEEEEEccchhhhChhhcCCCCC----CcchHH-----
Confidence 56789999999999999998889999999999999999999999999999999999877754432 223333
Q ss_pred hHHHHHHcchHHHHHHHHHHhhcCCCCcceEEecccccCchhHHhHHHHHHHHHHhCCCeEEEeCCCceeccCCCCCCCC
Q 005074 91 DGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSS 170 (715)
Q Consensus 91 ~~~~~~a~G~~~~~~l~~~~l~~~g~~~~~~~~~~~d~~~~~~~~~~~~~i~~ll~~g~iPVv~g~d~v~~~~~~~~~~~ 170 (715)
+|+++++||..++..|+..|..+|+.+.|+++|.+|+.++.+|.|...+|+.||+.|.|||+|+||++.. ++
T Consensus 74 -kQA~AAVGQ~~Lm~~y~~~f~~~g~~v~QiLLTr~D~~~r~ry~Nar~Tl~~Ll~~gvVPIINENDtva~-------~E 145 (369)
T COG0263 74 -KQAAAAVGQVRLMQLYEELFARYGIKVGQILLTRDDFSDRRRYLNARNTLSALLELGVVPIINENDTVAT-------EE 145 (369)
T ss_pred -HHHHHHhCHHHHHHHHHHHHHhcCCeeeEEEeehhhhhhHHHHHHHHHHHHHHHHCCceeeecCCCceee-------ee
Confidence 5699999999999999999999999999999999999999999999999999999999999999999998 45
Q ss_pred ceeecchhHHHHHHhhcCCCEEEEeccCCccccCCC-CCcCccccceeeccc-hhhHHhcCCCCCcccCChHHHHHHHHH
Q 005074 171 GIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPP-SEPNSKLIHTYIRAK-HQAEITFGDKSRVGRGGMTAKVNAAYC 248 (715)
Q Consensus 171 ~~~~~~D~~A~~lA~~L~A~~li~lTDVdGV~~~dP-~~p~a~~i~~is~~e-~~~~~~~g~~~~~~~ggM~~Kl~aa~~ 248 (715)
..|+|+|++++.+|...+||.|+++||+||+|+.|| ++|+|++|++++.-. -.+.+..++.+..+||||..|++||..
T Consensus 146 ikfGDND~LsA~VA~lv~ADlLvlLsDiDGLyd~nPr~~pdAk~i~~V~~it~ei~~~aggsgs~~GTGGM~TKl~AA~i 225 (369)
T COG0263 146 IKFGDNDTLSALVAILVGADLLVLLSDIDGLYDANPRTNPDAKLIPEVEEITPEIEAMAGGSGSELGTGGMRTKLEAAKI 225 (369)
T ss_pred eeecCCchHHHHHHHHhCCCEEEEEEccCcccCCCCCCCCCCeeehhhcccCHHHHHHhcCCCCCCCcccHHHHHHHHHH
Confidence 678999999999999999999999999999999999 599999999998533 223466677788999999999999999
Q ss_pred HHHcCCcEEEEeCCCcchHHHHHcCCcceeEEecC
Q 005074 249 AACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRD 283 (715)
Q Consensus 249 a~~~gv~v~I~~g~~~~~l~~~~tg~~iGT~i~~~ 283 (715)
|.+.|++++|++|+.++.+.+++.++..||++.+.
T Consensus 226 A~~aG~~~iI~~g~~~~~i~~~~~~~~~GT~F~~~ 260 (369)
T COG0263 226 ATRAGVPVIIASGSKPDVILDALEGEAVGTLFEPQ 260 (369)
T ss_pred HHHcCCcEEEecCCCcchHHHHHhCCCCccEEecC
Confidence 99999999999999999999999999999999977
No 135
>cd04256 AAK_P5CS_ProBA AAK_P5CS_ProBA: Glutamate-5-kinase (G5K) domain of the bifunctional delta 1-pyrroline-5-carboxylate synthetase (P5CS), composed of an N-terminal G5K (ProB) and a C-terminal glutamyl 5- phosphate reductase (G5PR, ProA), the first and second enzyme catalyzing proline (and, in mammals, ornithine) biosynthesis. G5K transfers the terminal phosphoryl group of ATP to the gamma-carboxyl group of glutamate, and is subject to feedback allosteric inhibition by proline or ornithine. In plants, proline plays an important role as an osmoprotectant and, in mammals, ornithine biosynthesis is crucial for proper ammonia detoxification, since a G5K mutation has been shown to cause human hyperammonaemia.
Probab=100.00 E-value=1.6e-40 Score=346.69 Aligned_cols=271 Identities=58% Similarity=0.832 Sum_probs=228.9
Q ss_pred hhhcccceEEEEeCCcccccCCC-cccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhcccC-------CCc
Q 005074 9 AFVKDVKRLVVKVGTAVVTRSDG-RLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVN-------SSL 80 (715)
Q Consensus 9 ~~~~~~k~~VIKiGGs~l~~~~~-~~~~~~l~~l~~~I~~l~~~G~~vviVhGgg~~i~~~~l~~~~~~~-------~~~ 80 (715)
+-+...+++|||+|||+++++++ .++.+.+..++++|+.|++.|+++|||.||+.++|+..++.+.... .++
T Consensus 3 ~~~~~~~~iVvKiGss~lt~~~~~~~~~~~l~~l~~~i~~l~~~g~~vilVssGAv~~G~~~l~~~~~~~~~~~~~~~g~ 82 (284)
T cd04256 3 SELKHAKRIVVKLGSAVVTREDECGLALGRLASIVEQVSELQSQGREVILVTSGAVAFGKQRLRHEILLSSSMRQTLKSG 82 (284)
T ss_pred hhhccCCEEEEEeCchhccCCCCCccCHHHHHHHHHHHHHHHHCCCEEEEEeeCcHHhChHHhhhccccccchhhhcccc
Confidence 33555789999999999998876 7899999999999999999999999898899999998886543211 111
Q ss_pred ccccCccccchHHHHHHcchHHHHHHHHHHhhcCCCCcceEEecccccCchhHHhHHHHHHHHHHhCCCeEEEeCCCcee
Q 005074 81 ADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVS 160 (715)
Q Consensus 81 ~~~~~~~~~l~~~~~~a~G~~~~~~l~~~~l~~~g~~~~~~~~~~~d~~~~~~~~~~~~~i~~ll~~g~iPVv~g~d~v~ 160 (715)
...+.....+.+++++++||..++.+|+..|..+++++.|+++|.+||.++..+.+..+.|+.||+.|+|||+++||++.
T Consensus 83 ~~~~~~~~~~~~qa~aa~gq~~L~~~y~~~f~~~~~~~~q~llt~~d~~~~~~~~~~~~~l~~lL~~g~iPVi~~nD~v~ 162 (284)
T cd04256 83 QLKDMPQMELDGRACAAVGQSGLMALYEAMFTQYGITVAQVLVTKPDFYDEQTRRNLNGTLEELLRLNIIPIINTNDAVS 162 (284)
T ss_pred cccCCcchhHHHHHHHHcccHHHHHHHHHHHHHcCCcHHHeeeeccccccHHHHHHHHHHHHHHHHCCCEEEEeCCCccc
Confidence 12222233457889999999999999999999999999999999999999888888889999999999999999999988
Q ss_pred ccCCCCCC-CCc-eeecchhHHHHHHhhcCCCEEEEeccCCccccCCCCCcCccccceeeccchhhHHhcCCCCCcccCC
Q 005074 161 TRKAPYED-SSG-IFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGG 238 (715)
Q Consensus 161 ~~~~~~~~-~~~-~~~~~D~~A~~lA~~L~A~~li~lTDVdGV~~~dP~~p~a~~i~~is~~e~~~~~~~g~~~~~~~gg 238 (715)
+....... .+. .++|+|++|+.+|.+|+||+|+|+|||||||++||++|++++|++++..+..+. ..++.+..++||
T Consensus 163 ~~~~~~~~~~~~~~i~d~D~lAa~lA~~l~Ad~Li~lTDVdGVy~~dP~~~~a~~I~~i~~~~~~~~-~~~~~s~~gtGG 241 (284)
T cd04256 163 PPPEPDEDLQGVISIKDNDSLAARLAVELKADLLILLSDVDGLYDGPPGSDDAKLIHTFYPGDQQSI-TFGTKSRVGTGG 241 (284)
T ss_pred ccccccccccccccccChHHHHHHHHHHcCCCEEEEEeCCCeeecCCCCCCCCeEcccccHhHHHHh-hcccccCcccCC
Confidence 64211111 111 359999999999999999999999999999999998899999999998776543 333445678999
Q ss_pred hHHHHHHHHHHHHcCCcEEEEeCCCcchHHHHHcCCcceeEE
Q 005074 239 MTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLF 280 (715)
Q Consensus 239 M~~Kl~aa~~a~~~gv~v~I~~g~~~~~l~~~~tg~~iGT~i 280 (715)
|.+|+++|..+.++|++++|+||..++.+.+++.|+..||++
T Consensus 242 M~~Kl~Aa~~a~~~Gi~v~I~~G~~~~~i~~~l~G~~~GT~~ 283 (284)
T cd04256 242 MEAKVKAALWALQGGTSVVITNGMAGDVITKILEGKKVGTFF 283 (284)
T ss_pred cHHHHHHHHHHHHCCCeEEEEcCCCccHHHHHHcCCCCCEEe
Confidence 999999999999999999999999999999999999999986
No 136
>KOG1154 consensus Gamma-glutamyl kinase [Amino acid transport and metabolism]
Probab=100.00 E-value=8.9e-41 Score=320.72 Aligned_cols=277 Identities=56% Similarity=0.828 Sum_probs=244.2
Q ss_pred hhhhhcccceEEEEeCCcccccCCC-cccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhcccCCCcccccC
Q 005074 7 SRAFVKDVKRLVVKVGTAVVTRSDG-RLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQK 85 (715)
Q Consensus 7 ~~~~~~~~k~~VIKiGGs~l~~~~~-~~~~~~l~~l~~~I~~l~~~G~~vviVhGgg~~i~~~~l~~~~~~~~~~~~~~~ 85 (715)
.|.++|+.+++|||+|.+++++++. .+-+.++..+++++.+|++.|++++||.+|+..+|...+.....+.+.+++.-.
T Consensus 2 ~r~~~kka~rIVVKLGSavit~e~~~~laLgrla~IVEqV~~L~~~G~evilVSSGaVA~G~qrLr~~~~~s~s~r~~l~ 81 (285)
T KOG1154|consen 2 KRAFLKKAYRIVVKLGSAVITREDTCGLALGRLASIVEQVSELQRMGREVILVSSGAVAFGRQRLRQELLPSSSMRQTLK 81 (285)
T ss_pred cchhhccceEEEEEecceEEECCCCccchHHHHHHHHHHHHHHHhcCceEEEEecchhhhhHHHhhhhhccchhHHHhhC
Confidence 3678999999999999999998875 467778999999999999999999999999999999887665555555665433
Q ss_pred cccc-chHHHHHHcchHHHHHHHHHHhhcCCCCcceEEecccccCchhHHhHHHHHHHHHHhCCCeEEEeCCCceeccCC
Q 005074 86 PQNE-LDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKA 164 (715)
Q Consensus 86 ~~~~-l~~~~~~a~G~~~~~~l~~~~l~~~g~~~~~~~~~~~d~~~~~~~~~~~~~i~~ll~~g~iPVv~g~d~v~~~~~ 164 (715)
.++. +.+++++++||.+++++|+.+|..+|+..+|+++|+.||.+...+.+...+|.+||..|+|||++.||++++..+
T Consensus 82 ~~~~l~e~rA~AAvGQ~~Lmalye~lF~Qy~~~iAQvLvT~~Di~d~~~r~Nl~~Ti~eLL~m~viPIvNeNDavs~~~~ 161 (285)
T KOG1154|consen 82 PQSELAEKRACAAVGQSGLMALYETLFTQYGITIAQVLVTRNDILDEQQRKNLQNTISELLSMNVIPIVNENDAVSPREI 161 (285)
T ss_pred CccchhhHHHHHHhCcchHHHHHHHHHHHhccchheeeecCcchhhHHHHHHHHHHHHHHHhCCceeeecCCCccCCccc
Confidence 3334 455799999999999999999999999999999999999999999998999999999999999999999999765
Q ss_pred CCCCCCceeecchhHHHHHHhhcCCCEEEEeccCCccccCCCCCcCccccceeeccchhhHHhcCCCCCcccCChHHHHH
Q 005074 165 PYEDSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVN 244 (715)
Q Consensus 165 ~~~~~~~~~~~~D~~A~~lA~~L~A~~li~lTDVdGV~~~dP~~p~a~~i~~is~~e~~~~~~~g~~~~~~~ggM~~Kl~ 244 (715)
++.+. -++|.+|+.+|..++||.|+++|||||+|+++|.....++|+..+..+..--..+|+++..++|||..|+.
T Consensus 162 ~~~D~----~dNDsLsA~laaei~ADlLilLsDVdglYt~PPd~~~~~li~~~~~~~~~v~~tfG~~SkvGtGGM~tKv~ 237 (285)
T KOG1154|consen 162 PFGDS----SDNDSLAAILAAEIKADLLILLSDVDGLYTGPPDADPSKLIHTFSPGDPQVSTTFGSKSKVGTGGMETKVK 237 (285)
T ss_pred ccCCC----CcccHHHHHHHHHhccCEEEEEecccccccCCCCCCcceeeeeeccCCCCCccccCccCccCcCcchhhHH
Confidence 54321 36999999999999999999999999999988866667899999998887567889999999999999999
Q ss_pred HHHHHHHcCCcEEEEeCCCcchHHHHHcCCcceeEEecCCccc
Q 005074 245 AAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRDAHLW 287 (715)
Q Consensus 245 aa~~a~~~gv~v~I~~g~~~~~l~~~~tg~~iGT~i~~~~~~~ 287 (715)
||..|...|++|+|+||..|+.+.+++.|...||.+...++.|
T Consensus 238 AA~~A~~~Gv~viI~~g~~p~~I~~iv~g~kvgt~f~~~~~~~ 280 (285)
T KOG1154|consen 238 AAVNALNAGVSVIITNGDAPENITDIVEGKKVGTFFEQLKRLE 280 (285)
T ss_pred HHHHHhcCCceEEEeCCCChHHHHHHHhhhhhhhhhhhccccc
Confidence 9999999999999999999999999999999999887664433
No 137
>PRK12314 gamma-glutamyl kinase; Provisional
Probab=100.00 E-value=7e-40 Score=340.04 Aligned_cols=261 Identities=39% Similarity=0.637 Sum_probs=222.3
Q ss_pred hhhhhcccceEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhcccCCCcccccCc
Q 005074 7 SRAFVKDVKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKP 86 (715)
Q Consensus 7 ~~~~~~~~k~~VIKiGGs~l~~~~~~~~~~~l~~l~~~I~~l~~~G~~vviVhGgg~~i~~~~l~~~~~~~~~~~~~~~~ 86 (715)
+|+.+++++++|||||||++++++++++.+++.+++++|++++..|+++|||.+|+.++|+..++.+..+ ..+.
T Consensus 2 ~~~~~~~~~~iViK~Ggs~l~~~~~~~~~~~i~~~~~~I~~~~~~g~~vvlV~Sga~~~g~~~l~~~~~~----~~~~-- 75 (266)
T PRK12314 2 MRRQLENAKRIVIKVGSSTLSYENGKINLERIEQLVFVISDLMNKGKEVILVSSGAIGAGLTKLKLDKRP----TSLA-- 75 (266)
T ss_pred hhhhHhhCCEEEEEeCCCeeeCCCCCcCHHHHHHHHHHHHHHHHCCCeEEEEeeCcccccceeeccccCC----CCHH--
Confidence 3455666789999999999998888889999999999999999999999998777788998766543211 1111
Q ss_pred cccchHHHHHHcchHHHHHHHHHHhhcCCCCcceEEecccccCchhHHhHHHHHHHHHHhCCCeEEEeCCCceeccCCCC
Q 005074 87 QNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPY 166 (715)
Q Consensus 87 ~~~l~~~~~~a~G~~~~~~l~~~~l~~~g~~~~~~~~~~~d~~~~~~~~~~~~~i~~ll~~g~iPVv~g~d~v~~~~~~~ 166 (715)
.++++.++||..++.+|...|..+|++++|+++|+++|.++..+.+..+.|+.+++.|+|||+++||.+...+
T Consensus 76 ----~~~a~aa~Gq~~l~~~~~~~~~~~g~~~~q~llT~~~~~~~~~~~~~~~~l~~ll~~g~IPVv~~nd~v~~~~--- 148 (266)
T PRK12314 76 ----EKQALAAVGQPELMSLYSKFFAEYGIVVAQILLTRDDFDSPKSRANVKNTFESLLELGILPIVNENDAVATDE--- 148 (266)
T ss_pred ----HHHHHHHHhHHHHHHHHHHHHHHcCCeEEEEEEecccccchHHHHHHHHHHHHHHHCCCEEEEcCCCCeeecc---
Confidence 2469999999999999999999999999999999999988888888889999999999999999999887643
Q ss_pred CCCCceeecchhHHHHHHhhcCCCEEEEeccCCccccCCCC-CcCccccceeec--cchhhHHhcCCCCCcccCChHHHH
Q 005074 167 EDSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIR--AKHQAEITFGDKSRVGRGGMTAKV 243 (715)
Q Consensus 167 ~~~~~~~~~~D~~A~~lA~~L~A~~li~lTDVdGV~~~dP~-~p~a~~i~~is~--~e~~~~~~~g~~~~~~~ggM~~Kl 243 (715)
.+..++++|++|+++|.+|+|++|+|+|||||||++||+ +|++++|++|++ .+..+. ..++.+.+++|||.+|+
T Consensus 149 --~~~~~~~~D~~Aa~lA~~l~Ad~liilTDVdGVy~~dP~~~~~a~~i~~I~~~~~~~~~~-~~~~~~~~~tGGM~~Kl 225 (266)
T PRK12314 149 --IDTKFGDNDRLSAIVAKLVKADLLIILSDIDGLYDKNPRINPDAKLRSEVTEITEEILAL-AGGAGSKFGTGGMVTKL 225 (266)
T ss_pred --ccceecchHHHHHHHHHHhCCCEEEEEeCCCcccCCCCCCCCCCeEEEEecCCCHHHHHH-hccCCCCcccCchHHHH
Confidence 222368899999999999999999999999999999995 899999999986 333332 23333457899999999
Q ss_pred HHHHHHHHcCCcEEEEeCCCcchHHHHHcCCcceeEEecC
Q 005074 244 NAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRD 283 (715)
Q Consensus 244 ~aa~~a~~~gv~v~I~~g~~~~~l~~~~tg~~iGT~i~~~ 283 (715)
++|..|.++|++++|+||+.++.+.++++|+..||++.+.
T Consensus 226 ~aa~~a~~~gv~v~I~~g~~~~~i~~~l~g~~~GT~i~~~ 265 (266)
T PRK12314 226 KAAKFLMEAGIKMVLANGFNPSDILDFLEGESIGTLFAPK 265 (266)
T ss_pred HHHHHHHHCCCeEEEEcCCCchHHHHHHcCCCCceEEccC
Confidence 9999999999999999999999999999998899998653
No 138
>PRK13402 gamma-glutamyl kinase; Provisional
Probab=100.00 E-value=1.7e-38 Score=341.10 Aligned_cols=254 Identities=37% Similarity=0.556 Sum_probs=218.6
Q ss_pred hcccceEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhcccCCCcccccCccccc
Q 005074 11 VKDVKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNEL 90 (715)
Q Consensus 11 ~~~~k~~VIKiGGs~l~~~~~~~~~~~l~~l~~~I~~l~~~G~~vviVhGgg~~i~~~~l~~~~~~~~~~~~~~~~~~~l 90 (715)
|..++++||||||+++++.++.++.+.+.+++++|+.|++.|+++||||||+..+|...++... +. .+ .
T Consensus 2 ~~~~kriVIKiGgs~L~~~~~~l~~~~i~~la~~I~~l~~~G~~vvlVsSGava~G~~~l~~~~----~~-~~------~ 70 (368)
T PRK13402 2 DSNWKRIVVKVGSSLLTPHHQGCSSHYLLGLVQQIVYLKDQGHQVVLVSSGAVAAGYHKLGFID----RP-SV------P 70 (368)
T ss_pred CCCCcEEEEEEchhhccCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeCChhhcCccccCCCC----CC-Cc------c
Confidence 3446899999999999987778999999999999999999999999999999888874332111 11 11 1
Q ss_pred hHHHHHHcchHHHHHHHHHHhhcCCCCcceEEecccccCchhHHhHHHHHHHHHHhCCCeEEEeCCCceeccCCCCCCCC
Q 005074 91 DGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSS 170 (715)
Q Consensus 91 ~~~~~~a~G~~~~~~l~~~~l~~~g~~~~~~~~~~~d~~~~~~~~~~~~~i~~ll~~g~iPVv~g~d~v~~~~~~~~~~~ 170 (715)
.++++.++||..++.+|...|..+|+++.|+++|++|+.++..+.+..+.|..||+.|+|||+++||++.. .+
T Consensus 71 ~~qalaavGq~~l~~~~~~~f~~~g~~~aqvLlT~~d~~~~~~y~n~~~~l~~LL~~g~IPIinenD~v~~-------~e 143 (368)
T PRK13402 71 EKQAMAAAGQGLLMATWSKLFLSHGFPAAQLLLTHGDLRDRERYINIRNTINVLLERGILPIINENDAVTT-------DR 143 (368)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHCCCeEEEEEEecchhhhHHHHHHHHHHHHHHHHCCcEEEEeCCCcEee-------cc
Confidence 35799999999999999999999999999999999898777777766789999999999999999898876 33
Q ss_pred ceeecchhHHHHHHhhcCCCEEEEeccCCccccCCCC-CcCccccceeec--cchhhHHhcCCCCCcccCChHHHHHHHH
Q 005074 171 GIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIR--AKHQAEITFGDKSRVGRGGMTAKVNAAY 247 (715)
Q Consensus 171 ~~~~~~D~~A~~lA~~L~A~~li~lTDVdGV~~~dP~-~p~a~~i~~is~--~e~~~~~~~g~~~~~~~ggM~~Kl~aa~ 247 (715)
..++++|++|+.+|.+|+||.|+|+|||||||++||+ +|++++|++|++ +|+.+ +..++.+..++|||.+|+++|.
T Consensus 144 l~~GdnD~lAa~vA~~l~Ad~LiilTDVdGvy~~dP~~~p~a~~I~~I~~i~~e~~~-l~~~~~s~~gtGGM~~Kl~Aa~ 222 (368)
T PRK13402 144 LKVGDNDNLSAMVAALADADTLIILSDIDGLYDQNPRTNPDAKLIKQVTEINAEIYA-MAGGAGSNVGTGGMRTKIQAAK 222 (368)
T ss_pred cccCChHHHHHHHHHHhCCCEEEEEecCCeEEeCCCCCCCCCEEEEEeccCcHHHHH-HhcccccCcCcCCchHHHHHHH
Confidence 4468999999999999999999999999999999994 999999999987 44443 3333445688999999999999
Q ss_pred HHHHcCCcEEEEeCCCcchHHHHHcCCcceeEEecC
Q 005074 248 CAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRD 283 (715)
Q Consensus 248 ~a~~~gv~v~I~~g~~~~~l~~~~tg~~iGT~i~~~ 283 (715)
.|.++|++++|+|+..++.+.+++.|+..||++.+.
T Consensus 223 ~a~~~gi~v~I~~g~~~~~l~~~l~g~~~GT~i~~~ 258 (368)
T PRK13402 223 IAMSHGIETFIGNGFTADIFNQLLKGQNPGTYFTPE 258 (368)
T ss_pred HHHHcCCcEEEEcCCCchHHHHHhcCCCCceEEecC
Confidence 999999999999999999999999999999999776
No 139
>PTZ00489 glutamate 5-kinase; Provisional
Probab=100.00 E-value=1.5e-37 Score=319.99 Aligned_cols=254 Identities=33% Similarity=0.518 Sum_probs=213.6
Q ss_pred hhhhhcccceEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhcccCCCcccccCc
Q 005074 7 SRAFVKDVKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKP 86 (715)
Q Consensus 7 ~~~~~~~~k~~VIKiGGs~l~~~~~~~~~~~l~~l~~~I~~l~~~G~~vviVhGgg~~i~~~~l~~~~~~~~~~~~~~~~ 86 (715)
||..+++.+++|||+|||++++++ .++...+..++++|+++++ ++++||||||+...|...++..+
T Consensus 1 ~~~~~~~~~riVIKlG~Svit~~~-~~~~~~~~~l~~~i~~l~~-~~~vilVssGava~g~~~~~~~~------------ 66 (264)
T PTZ00489 1 MADILKSVKRIVVKVGSSILVDNQ-EIAAHRIEALCRFIADLQT-KYEVILVTSGAVAAGYTKKEMDK------------ 66 (264)
T ss_pred ChhhhhcCCEEEEEeccceeeCCC-CcCHHHHHHHHHHHHHHhc-CCeEEEEecChHhcChhhcCCCc------------
Confidence 566777789999999999999765 6778889999999999986 79999999998777754332211
Q ss_pred cccchHHHHHHcchHHHHHHHHHHhhcCCCCcceEEecccccCchhHHhHHHHHHHHHHhCCCeEEEeCCCceeccCCCC
Q 005074 87 QNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPY 166 (715)
Q Consensus 87 ~~~l~~~~~~a~G~~~~~~l~~~~l~~~g~~~~~~~~~~~d~~~~~~~~~~~~~i~~ll~~g~iPVv~g~d~v~~~~~~~ 166 (715)
.....++++.++||..++.+|...|..+|+.+.|++++..|+.++..+.+..+.|+.||+.|+|||+++||.+..
T Consensus 67 ~~~~~~qa~aaiGq~~L~~~y~~~f~~~~~~~aqiLlt~~d~~~~~~~~n~~~~l~~lL~~g~VPIinend~~~~----- 141 (264)
T PTZ00489 67 SYVPNKQALASMGQPLLMHMYYTELQKHGILCAQMLLAAYDLDSRKRTINAHNTIEVLISHKVIPIINENDATAL----- 141 (264)
T ss_pred cccHHHHHHHHhCHHHHHHHHHHHHHhCCCeEEEeeeeccccccchhhHHHHHHHHHHHHCCCEEEECCCCCccc-----
Confidence 011245799999999999999999999999999999998888887777777899999999999999999987765
Q ss_pred CCCCceeecchhHHHHHHhhcCCCEEEEeccCCccccCCC-CCcCccc---cceeeccchhhHHhcCCCCCcccCChHHH
Q 005074 167 EDSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPP-SEPNSKL---IHTYIRAKHQAEITFGDKSRVGRGGMTAK 242 (715)
Q Consensus 167 ~~~~~~~~~~D~~A~~lA~~L~A~~li~lTDVdGV~~~dP-~~p~a~~---i~~is~~e~~~~~~~g~~~~~~~ggM~~K 242 (715)
.+..++|+|++|+.+|.+++||+|+|+|||||||++|| ++|++++ |++++.++... ..++.+.+++|||.+|
T Consensus 142 --~e~~~gdnD~lAa~lA~~l~Ad~LiilTDVdGVy~~dP~~~~~A~~~~~i~~i~~~~~~~--~~~~~~~~~tGGM~~K 217 (264)
T PTZ00489 142 --HELVFGDNDRLSALVAHHFKADLLVILSDIDGYYTENPRTSTDAKIRSVVHELSPDDLVA--EATPNNRFATGGIVTK 217 (264)
T ss_pred --ceeEeCChHHHHHHHHHHhCCCEEEEeeccCeeEcCCCCCCCccceeeeeccCCHHHHHH--hcCcCCCcccCChHHH
Confidence 22345899999999999999999999999999999999 4889988 66777665532 2233456899999999
Q ss_pred HHHHHHHHHcCCcEEEEeCCCcchHHHHHcCC--cceeEEecC
Q 005074 243 VNAAYCAACAGIPVVITSGFAMDSIIKVLEGK--RVGTLFHRD 283 (715)
Q Consensus 243 l~aa~~a~~~gv~v~I~~g~~~~~l~~~~tg~--~iGT~i~~~ 283 (715)
+++|..+.++|++++|+||+.++.+.+++.|+ ..||++.+.
T Consensus 218 l~aa~~a~~~Gi~v~I~~g~~~~~i~~~l~g~~~~~GT~~~~~ 260 (264)
T PTZ00489 218 LQAAQFLLERGGKMYLSSGFHLEKARDFLIGGSHEIGTLFYPR 260 (264)
T ss_pred HHHHHHHHHCCCCEEEEeCCCchHHHHHHcCCCCCCceEEeec
Confidence 99999999999999999999999999999775 479998654
No 140
>PRK05429 gamma-glutamyl kinase; Provisional
Probab=100.00 E-value=1e-37 Score=338.28 Aligned_cols=259 Identities=43% Similarity=0.657 Sum_probs=217.7
Q ss_pred hhhhhcccceEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhcccCCCcccccCc
Q 005074 7 SRAFVKDVKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKP 86 (715)
Q Consensus 7 ~~~~~~~~k~~VIKiGGs~l~~~~~~~~~~~l~~l~~~I~~l~~~G~~vviVhGgg~~i~~~~l~~~~~~~~~~~~~~~~ 86 (715)
+|+.+++++++|||||||+++++.++++.+.+.+++++|+++++.|+++||||||+...+...++.. .++..+.
T Consensus 1 ~~~~~~~~~~iVIKiGGs~l~~~~~~l~~~~i~~la~~I~~l~~~g~~vViV~sGai~~g~~~l~l~----~~~~~~~-- 74 (372)
T PRK05429 1 MRQALSDARRIVVKVGSSLLTGGGGGLDRARIAELARQIAALRAAGHEVVLVSSGAVAAGRERLGLP----ERPKTLA-- 74 (372)
T ss_pred CccchhhCCEEEEEeChhhccCCCCCcCHHHHHHHHHHHHHHHHCCCeEEEEcccHhhhhHhhcCCC----CCCCchH--
Confidence 3567777899999999999999877899999999999999999999999999988544443322221 1121111
Q ss_pred cccchHHHHHHcchHHHHHHHHHHhhcCCCCcceEEecccccCchhHHhHHHHHHHHHHhCCCeEEEeCCCceeccCCCC
Q 005074 87 QNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPY 166 (715)
Q Consensus 87 ~~~l~~~~~~a~G~~~~~~l~~~~l~~~g~~~~~~~~~~~d~~~~~~~~~~~~~i~~ll~~g~iPVv~g~d~v~~~~~~~ 166 (715)
..+++.++||..++.+|...|..+|+++.|+++|+.++.+...+.+..+.|..|++.|+|||+++||.+....
T Consensus 75 ----~~qa~aavGq~~L~~~~~~~l~~~gi~~~qil~t~~d~~~~~~~ln~~~~i~~Ll~~g~IPVi~~nd~v~~~~--- 147 (372)
T PRK05429 75 ----EKQAAAAVGQSRLMQAYEELFARYGITVAQILLTRDDLEDRERYLNARNTLRTLLELGVVPIINENDTVATDE--- 147 (372)
T ss_pred ----HHHHHHHHhHHHHHHHHHHHHHHCCCCEEEEEeehhHhhhhhHhhhHHHHHHHHHHCCCEEEEcCCCccceec---
Confidence 2358899999999999999999999999999999888876666656578999999999999999988887532
Q ss_pred CCCCceeecchhHHHHHHhhcCCCEEEEeccCCccccCCCC-CcCccccceeec--cchhhHHhcCCCCCcccCChHHHH
Q 005074 167 EDSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIR--AKHQAEITFGDKSRVGRGGMTAKV 243 (715)
Q Consensus 167 ~~~~~~~~~~D~~A~~lA~~L~A~~li~lTDVdGV~~~dP~-~p~a~~i~~is~--~e~~~~~~~g~~~~~~~ggM~~Kl 243 (715)
..++|+|++|+.+|.+|+|++|+|+|||||||++||+ +|++++|+++++ +|+.+++ .++.+.+++|||.+|+
T Consensus 148 ----l~~gd~D~~Aa~lA~~l~Ad~LiilTDVdGVy~~dP~~~p~a~~I~~i~~~~~e~~~~~-~~~~~~~gtGGM~~Kl 222 (372)
T PRK05429 148 ----IKFGDNDTLSALVANLVEADLLILLTDVDGLYTADPRKNPDAKLIPEVEEITDELEAMA-GGAGSGLGTGGMATKL 222 (372)
T ss_pred ----ccccChHHHHHHHHHHcCCCEEEEecCCCeeEcCCCCCCCCceEEEEeccCCHHHHHHh-cCCCCCcCcCCcHHHH
Confidence 2358999999999999999999999999999999995 799999999987 4566543 3333468999999999
Q ss_pred HHHHHHHHcCCcEEEEeCCCcchHHHHHcCCcceeEEecC
Q 005074 244 NAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRD 283 (715)
Q Consensus 244 ~aa~~a~~~gv~v~I~~g~~~~~l~~~~tg~~iGT~i~~~ 283 (715)
++|..+.++|++++|+||+.++.+.+.+.|+..||++.+.
T Consensus 223 ~aa~~a~~~Gi~v~I~~g~~~~~l~~~l~g~~~GT~i~~~ 262 (372)
T PRK05429 223 EAARIATRAGIPVVIASGREPDVLLRLLAGEAVGTLFLPQ 262 (372)
T ss_pred HHHHHHHHCCCeEEEEcCCCccHHHHHhcCCCCCEEEeeC
Confidence 9999999999999999999999999999999999999876
No 141
>cd04242 AAK_G5K_ProB AAK_G5K_ProB: Glutamate-5-kinase (G5K) catalyzes glutamate-dependent ATP cleavage; G5K transfers the terminal phosphoryl group of ATP to the gamma-carboxyl group of glutamate, in the first and controlling step of proline (and, in mammals, ornithine) biosynthesis. G5K is subject to feedback allosteric inhibition by proline or ornithine. In microorganisms and plants, proline plays an important role as an osmoprotectant and, in mammals, ornithine biosynthesis is crucial for proper ammonia detoxification, since a G5K mutation has been shown to cause human hyperammonaemia. Microbial G5K generally consists of two domains: a catalytic G5K domain and one PUA (pseudo uridine synthases and archaeosine-specific transglycosylases) domain, and some lack the PUA domain. G5K requires free Mg for activity, it is tetrameric, and it aggregates to higher forms in a proline-dependent way. G5K lacking the PUA domain remains tetrameric, active, and proline-inhibitable, but the Mg requir
Probab=100.00 E-value=2.3e-37 Score=319.87 Aligned_cols=247 Identities=50% Similarity=0.724 Sum_probs=211.2
Q ss_pred eEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhcccCCCcccccCccccchHHHH
Q 005074 16 RLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKAC 95 (715)
Q Consensus 16 ~~VIKiGGs~l~~~~~~~~~~~l~~l~~~I~~l~~~G~~vviVhGgg~~i~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~ 95 (715)
++|||||||+++++++.++.+++.+++++|+++++.|+++||||||+.++|+..++... ++..+. ..+++
T Consensus 1 ~iViK~GGs~i~~~~~~~~~~~i~~~~~~i~~~~~~~~~viiV~sg~~~~g~~~~~~~~----~~~~~~------~~~~~ 70 (251)
T cd04242 1 RIVVKVGSSLLTDEDGGLDLGRLASLVEQIAELRNQGKEVILVSSGAVAAGRQRLGLEK----RPKTLP------EKQAL 70 (251)
T ss_pred CEEEEeCCCeeeCCCCCcCHHHHHHHHHHHHHHHHCCCeEEEEecCchhhChhhhccCc----CCCchh------HHHHH
Confidence 58999999999998877788889999999999999999999999998988875443221 111111 13588
Q ss_pred HHcchHHHHHHHHHHhhcCCCCcceEEecccccCchhHHhHHHHHHHHHHhCCCeEEEeCCCceeccCCCCCCCCceeec
Q 005074 96 AAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWD 175 (715)
Q Consensus 96 ~a~G~~~~~~l~~~~l~~~g~~~~~~~~~~~d~~~~~~~~~~~~~i~~ll~~g~iPVv~g~d~v~~~~~~~~~~~~~~~~ 175 (715)
.++||..++.++...|..+|+++.|+++++++|.+...+.+..+.|+.+|++|+|||+++||.+.+.+ ..++|
T Consensus 71 ~~~Gq~~l~~~~~~~l~~~Gi~~~q~l~t~~~~~~~~~~~~~~~~i~~ll~~g~iPVv~~~d~v~~~~-------~~~~~ 143 (251)
T cd04242 71 AAVGQSLLMALYEQLFAQYGIKVAQILLTRDDFEDRKRYLNARNTLETLLELGVIPIINENDTVATEE-------IRFGD 143 (251)
T ss_pred HHHhHHHHHHHHHHHHHHcCCeEEEEEEehhHhcchHHHHHHHHHHHHHHHCCCEEEEcCCCCeeeec-------cccCC
Confidence 99999999999999999999999999999888876655555578999999999999999989887621 22589
Q ss_pred chhHHHHHHhhcCCCEEEEeccCCccccCCCC-CcCccccceee--ccchhhHHhcCCCCCcccCChHHHHHHHHHHHHc
Q 005074 176 NDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYI--RAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACA 252 (715)
Q Consensus 176 ~D~~A~~lA~~L~A~~li~lTDVdGV~~~dP~-~p~a~~i~~is--~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a~~~ 252 (715)
+|++|+.+|.+|+|++|+|+|||||||++||+ +|++++|++|+ ++|+.++. .+..+.+++|||++|++++..+.++
T Consensus 144 ~D~~A~~lA~~l~Ad~liilTDVdGvy~~dP~~~~~a~~i~~i~~~~~e~~~~~-~~~~~~~~tggm~~Kl~a~~~a~~~ 222 (251)
T cd04242 144 NDRLSALVAGLVNADLLILLSDVDGLYDKNPRENPDAKLIPEVEEITDEIEAMA-GGSGSSVGTGGMRTKLKAARIATEA 222 (251)
T ss_pred hHHHHHHHHHHcCCCEEEEecCcCEEEeCCCCCCCCCeEEEEecCChHHHHHHh-cccCcCcccCCcHHHHHHHHHHHHC
Confidence 99999999999999999999999999999995 78999999999 88887643 2333468999999999999999999
Q ss_pred CCcEEEEeCCCcchHHHHHcCCcceeEE
Q 005074 253 GIPVVITSGFAMDSIIKVLEGKRVGTLF 280 (715)
Q Consensus 253 gv~v~I~~g~~~~~l~~~~tg~~iGT~i 280 (715)
|++++|+||..++.+.+.++|+..||++
T Consensus 223 gi~v~I~~g~~~~~i~~~l~g~~~GT~i 250 (251)
T cd04242 223 GIPVVIANGRKPDVLLDILAGEAVGTLF 250 (251)
T ss_pred CCcEEEEcCCCCCHHHHHHcCCCCCeEe
Confidence 9999999999999999999999899986
No 142
>TIGR01027 proB glutamate 5-kinase. Bacterial ProB proteins hit the full length of this model, but the ProB-like domain of delta 1-pyrroline-5-carboxylate synthetase does not hit the C-terminal 100 residues of this model. The noise cutoff is set low enough to hit delta 1-pyrroline-5-carboxylate synthetase and other partial matches to this family.
Probab=100.00 E-value=7.7e-37 Score=330.08 Aligned_cols=252 Identities=43% Similarity=0.651 Sum_probs=214.6
Q ss_pred ceEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhcccCCCcccccCccccchHHH
Q 005074 15 KRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKA 94 (715)
Q Consensus 15 k~~VIKiGGs~l~~~~~~~~~~~l~~l~~~I~~l~~~G~~vviVhGgg~~i~~~~l~~~~~~~~~~~~~~~~~~~l~~~~ 94 (715)
+++|||||||+++++++.++.+.+.+++++|+.++++|+++||||||+...+...++. ...+..+. .+++
T Consensus 1 ~riVIKiGgs~l~~~~~~~~~~~i~~la~~I~~l~~~g~~vvlV~sG~~~~g~~~lg~----~~~~~~l~------~~qa 70 (363)
T TIGR01027 1 QRIVVKVGSSSLTGSSGSLDRSHIAELVEQVAALHAAGHEVVIVSSGAIAAGFEALGL----PERPKTLA------EKQA 70 (363)
T ss_pred CeEEEEeccceEeCCCCCcCHHHHHHHHHHHHHHHHCCCeEEEEeCcHHhcCccccCC----CCCccchH------HHHH
Confidence 4799999999999987778889999999999999999999999999986555433321 11111221 2468
Q ss_pred HHHcchHHHHHHHHHHhhcCCCCcceEEecccccCchhHHhHHHHHHHHHHhCCCeEEEeCCCceeccCCCCCCCCceee
Q 005074 95 CAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFW 174 (715)
Q Consensus 95 ~~a~G~~~~~~l~~~~l~~~g~~~~~~~~~~~d~~~~~~~~~~~~~i~~ll~~g~iPVv~g~d~v~~~~~~~~~~~~~~~ 174 (715)
++++||..++.+|...|..+|+++.|+++|++||.+...+.+....|..||++|+|||++.||.+...+ ..++
T Consensus 71 ~aa~Gq~~l~~~~~~~l~~~Gi~~aqillt~~d~~~~~~~lna~~~i~~Ll~~g~iPVi~end~v~~~~-------l~~g 143 (363)
T TIGR01027 71 LAAVGQVRLMQLYEQLFSQYGIKVAQILLTRADFSDRERYLNARNTLEALLELGVVPIINENDTVATEE-------IKFG 143 (363)
T ss_pred HHHhChHHHHHHHHHHHHHcCCeEEEEEEeccchhhHHHHHHHHHHHHHHHhCCCEEEEeCCCceeeee-------cCcC
Confidence 999999999999999999999999999999999988777777779999999999999999888886532 2358
Q ss_pred cchhHHHHHHhhcCCCEEEEeccCCccccCCC-CCcCccccceeeccc-hhhHHhcCCCCCcccCChHHHHHHHHHHHHc
Q 005074 175 DNDSLAGLLALELKADLLVLLSDVEGLYSGPP-SEPNSKLIHTYIRAK-HQAEITFGDKSRVGRGGMTAKVNAAYCAACA 252 (715)
Q Consensus 175 ~~D~~A~~lA~~L~A~~li~lTDVdGV~~~dP-~~p~a~~i~~is~~e-~~~~~~~g~~~~~~~ggM~~Kl~aa~~a~~~ 252 (715)
|+|++|+.+|.+|+||.|+|+|||||||++|| ++|++++|+++++.+ ....+..++.+.+++|||.+|+++|..|.+.
T Consensus 144 d~D~lAa~lA~~l~Ad~liilTDVdGVy~~dP~~~p~A~~I~~i~~~~~~~~~i~~~~~~~~gtGGM~~Kl~Aa~~a~~~ 223 (363)
T TIGR01027 144 DNDTLSALVAILVGADLLVLLTDVDGLYDADPRTNPDAKLIPVVEEITDLLLGVAGDSGSSVGTGGMRTKLQAADLATRA 223 (363)
T ss_pred ChHHHHHHHHHHcCCCEEEEEeCCCcccCCCCCCCCCCeEEEEeccCcHHHHHhhcCCCcCcCcCCchHHHHHHHHHHHC
Confidence 99999999999999999999999999999999 599999999998653 3334444444558999999999999999999
Q ss_pred CCcEEEEeCCCcchHHHHHcCCcceeEEecC
Q 005074 253 GIPVVITSGFAMDSIIKVLEGKRVGTLFHRD 283 (715)
Q Consensus 253 gv~v~I~~g~~~~~l~~~~tg~~iGT~i~~~ 283 (715)
|++++|+|++.++.+.+++.|+..||++.+.
T Consensus 224 gi~v~I~~g~~~~~l~~~l~g~~~GT~i~~~ 254 (363)
T TIGR01027 224 GVPVIIASGSKPEKIADALEGAPVGTLFHAQ 254 (363)
T ss_pred CCeEEEEeCCCccHHHHHhcCCCCcEEEeeC
Confidence 9999999999999999999999999999776
No 143
>COG0548 ArgB Acetylglutamate kinase [Amino acid transport and metabolism]
Probab=100.00 E-value=2.8e-33 Score=282.73 Aligned_cols=241 Identities=24% Similarity=0.315 Sum_probs=185.4
Q ss_pred cceEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhcccCCCccc----ccCcccc
Q 005074 14 VKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLAD----LQKPQNE 89 (715)
Q Consensus 14 ~k~~VIKiGGs~l~~~~~~~~~~~l~~l~~~I~~l~~~G~~vviVhGgg~~i~~~~l~~~~~~~~~~~~----~~~~~~~ 89 (715)
+|++|||+||+++.+++ .+..++++|+.|+..|.++|||||||+++++.+. ..++++.|.+ ++..+|+
T Consensus 2 ~k~~VIK~GG~~~~~~~------l~~~~~~di~lL~~~G~~~VvVHGggp~I~~~l~--~~gie~~f~~glRvTd~~tle 73 (265)
T COG0548 2 GKTIVIKLGGSAMEDEN------LLEAFASDIALLKSVGIRPVVVHGGGPQIDEMLA--KLGIEPEFVKGLRVTDAETLE 73 (265)
T ss_pred CceEEEEECceeecCch------HHHHHHHHHHHHHHCCCcEEEEeCCchHHHHHHH--HcCCCCeeeCCEEcCCHHHHH
Confidence 68999999999999864 3789999999999999999999999999999764 3455555544 3333333
Q ss_pred chHHHHHHcchHHHHHHHHHHhhcCCCCcceEEecccc--------------cCchhH-HhHHHHHHHHHHhCCCeEEEe
Q 005074 90 LDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSD--------------FRDEDF-RKQLYDTVQSLLDLRVIPIFN 154 (715)
Q Consensus 90 l~~~~~~a~G~~~~~~l~~~~l~~~g~~~~~~~~~~~d--------------~~~~~~-~~~~~~~i~~ll~~g~iPVv~ 154 (715)
...+++. |+... .+...|...|.++..+...+++ ++.-+. ...+++.|+.++++|+|||++
T Consensus 74 vv~mvl~--G~vNk--~iva~l~~~g~~avGlsg~Dg~li~A~~~~~~~~id~g~vG~i~~Vn~~~i~~ll~~~~IpVia 149 (265)
T COG0548 74 VVEMVLG--GTVNK--EIVARLSKHGGQAVGLSGVDGNLVTAKKLDVDDGVDLGYVGEIRKVNPELIERLLDNGAIPVIA 149 (265)
T ss_pred HHHHHHH--HHHHH--HHHHHHHHhCCcceeeeecCCCEEEEEEcccccccccceeeeEEEECHHHHHHHHhCCCceEEe
Confidence 3333332 22222 2234555555444333222221 221111 125688999999999999996
Q ss_pred CCCceeccCCCCCCCCcee-ecchhHHHHHHhhcCCCEEEEeccCCccccCCCCCcCccccceeeccchhhHHhcCCCCC
Q 005074 155 ENDAVSTRKAPYEDSSGIF-WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSR 233 (715)
Q Consensus 155 g~d~v~~~~~~~~~~~~~~-~~~D~~A~~lA~~L~A~~li~lTDVdGV~~~dP~~p~a~~i~~is~~e~~~~~~~g~~~~ 233 (715)
+ ++.+.++..+ +|+|++|..+|.+|+|++|+++|||+||++++| +| ++|++++.+|+++++.++
T Consensus 150 p--------ia~~~~G~~~NvnaD~~A~~iA~aLkAekLi~ltdv~Gvl~~~~-~~--s~i~~~~~~~~~~li~~~---- 214 (265)
T COG0548 150 P--------IAVDEDGETLNVNADTAAGALAAALKAEKLILLTDVPGVLDDKG-DP--SLISELDAEEAEELIEQG---- 214 (265)
T ss_pred c--------ceECCCCcEEeeCHHHHHHHHHHHcCCCeEEEEeCCcccccCCC-Cc--eeeccCCHHHHHHHHhcC----
Confidence 5 2344467777 999999999999999999999999999999875 33 699999999999998865
Q ss_pred cccCChHHHHHHHHHHHHcCCc-EEEEeCCCcchH-HHHHcCCcceeEEe
Q 005074 234 VGRGGMTAKVNAAYCAACAGIP-VVITSGFAMDSI-IKVLEGKRVGTLFH 281 (715)
Q Consensus 234 ~~~ggM~~Kl~aa~~a~~~gv~-v~I~~g~~~~~l-~~~~tg~~iGT~i~ 281 (715)
.++|||.||+++|+.|++.|++ |||+||+.++.+ .++|++..+||.+.
T Consensus 215 ~i~~GMi~Kv~~a~~A~~~Gv~~v~ii~g~~~~~ll~eLFt~~giGT~i~ 264 (265)
T COG0548 215 IITGGMIPKVEAALEALESGVRRVHIISGRVPHSLLLELFTRDGIGTMIV 264 (265)
T ss_pred CccCccHHHHHHHHHHHHhCCCeEEEecCCCcchHHHHHhcCCCcceEec
Confidence 7799999999999999999997 999999999996 88999999999874
No 144
>cd04241 AAK_FomA-like AAK_FomA-like: This CD includes a fosfomycin biosynthetic gene product, FomA, and similar proteins found in a wide range of organisms. Together, the fomA and fomB genes in the fosfomycin biosynthetic gene cluster of Streptomyces wedmorensis confer high-level fosfomycin resistance. FomA and FomB proteins converted fosfomycin to fosfomycin monophosphate and fosfomycin diphosphate in the presence of ATP and a magnesium ion, indicating that FomA and FomB catalyzed phosphorylations of fosfomycin and fosfomycin monophosphate, respectively. FomA and related sequences in this CD are members of the Amino Acid Kinase Superfamily (AAK).
Probab=100.00 E-value=3.6e-32 Score=281.92 Aligned_cols=243 Identities=23% Similarity=0.353 Sum_probs=180.2
Q ss_pred eEEEEeCCcccccCCC--cccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhcccCCCcccccCccccchHH
Q 005074 16 RLVVKVGTAVVTRSDG--RLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGK 93 (715)
Q Consensus 16 ~~VIKiGGs~l~~~~~--~~~~~~l~~l~~~I~~l~~~G~~vviVhGgg~~i~~~~l~~~~~~~~~~~~~~~~~~~l~~~ 93 (715)
++|||+|||++++++. .++.+.+++++++|++++ |+++|||||||+ +++..+..+ ++..+.+..+...+..
T Consensus 1 ~iVIKiGGs~l~~~~~~~~~~~~~l~~l~~~l~~l~--g~~vvlVhGgg~-~~~~~~~~~-g~~~g~~~~~~~~l~~--- 73 (252)
T cd04241 1 MIILKLGGSVITDKDRPETIREENLERIARELAEAI--DEKLVLVHGGGS-FGHPKAKEY-GLPDGDGSFSAEGVAE--- 73 (252)
T ss_pred CEEEEEeceEEEcCCCCCccCHHHHHHHHHHHHhcc--CCCEEEEECCCc-ccCHHHHHh-CCCcCCCchhhhhHHH---
Confidence 4899999999998743 678888999999999887 999999998766 455444433 2221111111111111
Q ss_pred HHHHcchHHHHHHHHHHhhcCCCCcc-----eEEecccccCchhHHhHHHHHHHHHHhCCCeEEEeCCCceeccCCCCCC
Q 005074 94 ACAAVGQSSLMALYDTLFSQLDVTSS-----QLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYED 168 (715)
Q Consensus 94 ~~~a~G~~~~~~l~~~~l~~~g~~~~-----~~~~~~~d~~~~~~~~~~~~~i~~ll~~g~iPVv~g~d~v~~~~~~~~~ 168 (715)
...++ ..+...+...|..+|+++. +++.+.. ...+.++.+.|+++|+.|+|||++| |.+...
T Consensus 74 ~~~~~--~~ln~~~~~~l~~~g~~a~~l~~~~~~~~~~----g~~~~~~~~~l~~ll~~g~iPVi~~-~~~~~~------ 140 (252)
T cd04241 74 THEAM--LELNSIVVDALLEAGVPAVSVPPSSFFVTEN----GRIVSFDLEVIKELLDRGFVPVLHG-DVVLDE------ 140 (252)
T ss_pred HHHHH--HHHHHHHHHHHHHCCCCeEEEChHHeEEecC----CeeeeecHHHHHHHHhCCCEEEEcC-CeEecC------
Confidence 11111 2444456677777787765 3333321 1123355789999999999999997 544431
Q ss_pred CCce-eecchhHHHHHHhhcCCCEEEEeccCCccccCCCCCcCccccceeeccchhhHHhc-CCCCCcccCChHHHHHHH
Q 005074 169 SSGI-FWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITF-GDKSRVGRGGMTAKVNAA 246 (715)
Q Consensus 169 ~~~~-~~~~D~~A~~lA~~L~A~~li~lTDVdGV~~~dP~~p~a~~i~~is~~e~~~~~~~-g~~~~~~~ggM~~Kl~aa 246 (715)
.++. ++|+|++|+.+|.+|+|++|+|+|||||||++|| |++++|++|+++++++++.. ++.+.+++|||.+|+++|
T Consensus 141 ~~~~~~~~~D~~A~~lA~~l~A~~li~ltdv~Gv~~~~P--~~~~~i~~i~~~~~~~~~~~~~~~~~~~tGGm~~Kl~aa 218 (252)
T cd04241 141 GGGITILSGDDIVVELAKALKPERVIFLTDVDGVYDKPP--PDAKLIPEIDVGSLEDILAALGSAGTDVTGGMAGKIEEL 218 (252)
T ss_pred CCCeEEeChHHHHHHHHHHcCCCEEEEEeCCCeeECCCC--CCCeEcceeCccchHHHHHhcCcCCccccCCHHHHHHHH
Confidence 2333 4999999999999999999999999999999999 88999999999888876542 222357899999999999
Q ss_pred HHHHHcCCcEEEEeCCCcchHHHHHcCCcceeEE
Q 005074 247 YCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLF 280 (715)
Q Consensus 247 ~~a~~~gv~v~I~~g~~~~~l~~~~tg~~iGT~i 280 (715)
..++++|++++|+||+.++.+.+.++|+..||++
T Consensus 219 ~~a~~~Gv~v~I~~g~~~~~l~~~l~g~~~GT~i 252 (252)
T cd04241 219 LELARRGIEVYIFNGDKPENLYRALLGNFIGTRI 252 (252)
T ss_pred HHHHhcCCeEEEEeCCCHHHHHHHHcCCCCceEC
Confidence 9999999999999999999999999999899874
No 145
>PRK12353 putative amino acid kinase; Reviewed
Probab=99.97 E-value=5.4e-31 Score=278.63 Aligned_cols=256 Identities=22% Similarity=0.290 Sum_probs=190.3
Q ss_pred ccceEEEEeCCcccccCCC--cccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhcccCCCcccccCccccc
Q 005074 13 DVKRLVVKVGTAVVTRSDG--RLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNEL 90 (715)
Q Consensus 13 ~~k~~VIKiGGs~l~~~~~--~~~~~~l~~l~~~I~~l~~~G~~vviVhGgg~~i~~~~l~~~~~~~~~~~~~~~~~~~l 90 (715)
+++++||||||++|+++++ +++.+++.+++++|+.++..|+++||||||++++|+..++.... ..+.. .... +
T Consensus 1 ~~~~iVIklGG~~L~~~~~~~~~~~~~i~~la~~Ia~l~~~G~~vvlV~Gg~~~~G~~~~~~~~~--~~~~~-~~~~--~ 75 (314)
T PRK12353 1 MMKKIVVALGGNALGSTPEEATAQLEAVKKTAKSLVDLIEEGHEVVITHGNGPQVGNILLAQEAA--ASEKN-KVPA--M 75 (314)
T ss_pred CCcEEEEEECHHHhCCCCCCCcccHHHHHHHHHHHHHHHHCCCEEEEEeCCchHhCHHHhcCccc--cccCC-CCCC--c
Confidence 3689999999999999875 48899999999999999999999999999999999986543221 11111 1111 1
Q ss_pred hHHHHHHcchH----HHHHHHHHHhhcCCC------CcceEEecccccC--ch---------------------------
Q 005074 91 DGKACAAVGQS----SLMALYDTLFSQLDV------TSSQLLVTDSDFR--DE--------------------------- 131 (715)
Q Consensus 91 ~~~~~~a~G~~----~~~~l~~~~l~~~g~------~~~~~~~~~~d~~--~~--------------------------- 131 (715)
..+++.+.+|. .+...+...|..+|+ ...|++++.+|+. ..
T Consensus 76 ~~~~~~a~~qg~l~~~l~~~~~~~l~~~~~~~~~~~~v~q~ll~~~d~~f~~~~~p~g~~~~~~~~~~~~~~~g~~~~~~ 155 (314)
T PRK12353 76 PLDVCGAMSQGYIGYHLQNALRNELLKRGIDKPVATVVTQVVVDANDPAFKNPTKPIGPFYTEEEAEKLAKEKGYTFKED 155 (314)
T ss_pred hhHHHHHHHhHHHHHHHHHHHHHHHHhcCCCcccceEEEEEEEcCCcccccCCCccccccccHHHHHHhhhhcCceeeec
Confidence 12345555555 345678889988887 4456667766522 21
Q ss_pred -h-HHh-----------HHHHHHHHHHhCCCeEEEeCCCceeccCCCCCCCCc-eeecchhHHHHHHhhcCCCEEEEecc
Q 005074 132 -D-FRK-----------QLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSG-IFWDNDSLAGLLALELKADLLVLLSD 197 (715)
Q Consensus 132 -~-~~~-----------~~~~~i~~ll~~g~iPVv~g~d~v~~~~~~~~~~~~-~~~~~D~~A~~lA~~L~A~~li~lTD 197 (715)
+ .+. .+.+.|+.+|++|+|||++|...+....-..+..+. .++|+|++|+.+|.+|+||+|+|+||
T Consensus 156 ~~~~~r~~v~sp~p~~~v~~~~i~~lL~~g~IpV~~g~gg~Pi~~~~~~~~~~~~~~d~D~lAa~lA~~l~Ad~Li~lTd 235 (314)
T PRK12353 156 AGRGYRRVVPSPKPVDIVEIEAIKTLVDAGQVVIAAGGGGIPVIREGGGLKGVEAVIDKDFASAKLAELVDADLLIILTA 235 (314)
T ss_pred CCceeEeccCCCCccccccHHHHHHHHHCCCEEEEcCCCCCCEEEeCCceeeeeEecCHHHHHHHHHHHhCCCEEEEEeC
Confidence 0 011 246899999999999999983322221000000011 14999999999999999999999999
Q ss_pred CCccccCCCCCcCccccceeeccchhhHHhcCCCCCcccCChHHHHHHHHHHH--HcCCcEEEEeCCCcchHHHHHcCCc
Q 005074 198 VEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAA--CAGIPVVITSGFAMDSIIKVLEGKR 275 (715)
Q Consensus 198 VdGV~~~dP~~p~a~~i~~is~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a~--~~gv~v~I~~g~~~~~l~~~~tg~~ 275 (715)
|||||++|| +|++++|++++++++.+++..+ ...+|||.+|+++|..++ +.|++++|++ ++++.+++.|+
T Consensus 236 vdGVy~~~~-~~~a~~i~~i~~~e~~~~~~~~---~~~tGGM~~Kl~aA~~a~~~~~g~~v~I~~---~~~i~~~l~g~- 307 (314)
T PRK12353 236 VDKVYINFG-KPNQKKLDEVTVSEAEKYIEEG---QFAPGSMLPKVEAAISFVESRPGRKAIITS---LEKAKEALEGK- 307 (314)
T ss_pred CccccCCCC-CCCCeECcCcCHHHHHHHHhcC---CcCCCCcHHHHHHHHHHHHHcCCCEEEECC---chHHHHHhCCC-
Confidence 999999766 6899999999998888766542 467899999999999999 5688899998 67888888888
Q ss_pred ceeEEe
Q 005074 276 VGTLFH 281 (715)
Q Consensus 276 iGT~i~ 281 (715)
.||++.
T Consensus 308 ~GT~i~ 313 (314)
T PRK12353 308 AGTVIV 313 (314)
T ss_pred CCeEec
Confidence 899874
No 146
>COG1608 Predicted archaeal kinase [General function prediction only]
Probab=99.97 E-value=2.9e-31 Score=258.99 Aligned_cols=240 Identities=21% Similarity=0.306 Sum_probs=176.5
Q ss_pred EEEEeCCcccccCCC--cccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhcccCCCcccccC-ccccchHH
Q 005074 17 LVVKVGTAVVTRSDG--RLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQK-PQNELDGK 93 (715)
Q Consensus 17 ~VIKiGGs~l~~~~~--~~~~~~l~~l~~~I~~l~~~G~~vviVhGgg~~i~~~~l~~~~~~~~~~~~~~~-~~~~l~~~ 93 (715)
+|+|||||+|++|+. +++.+++++++.+|+. ..-.++|||||| ++|||...+.+.. + ...+... .-..+...
T Consensus 3 ~IlKlGGSvITdK~~p~t~r~~~l~ria~eI~~--~~~~~livVHGg-GSFGHp~Ak~~~~-~-~~~~~~s~~G~~~~~~ 77 (252)
T COG1608 3 IILKLGGSVITDKDKPRTVREDRLRRIAREISN--GKPEKLIVVHGG-GSFGHPAAKEFGL-E-GLKNYLSPLGFSLTHL 77 (252)
T ss_pred EEEEecceeeecCCCcchhhHHHHHHHHHHHhc--CCcccEEEEecC-ccccCHHHHHhCc-c-ccccccCccchHHHHH
Confidence 899999999999976 5677888898888875 222378899975 7799988776643 1 1111000 00011223
Q ss_pred HHHHcchHHHHHHHHHHhhcCCCCcc-----eEEecccccCchhHHhHHHHHHHHHHhCCCeEEEeCCCceeccCCCCCC
Q 005074 94 ACAAVGQSSLMALYDTLFSQLDVTSS-----QLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYED 168 (715)
Q Consensus 94 ~~~a~G~~~~~~l~~~~l~~~g~~~~-----~~~~~~~d~~~~~~~~~~~~~i~~ll~~g~iPVv~g~d~v~~~~~~~~~ 168 (715)
++..+....++ .|...|+.+. ....-++.+. ....+.+..+|+.|++||++| |++....
T Consensus 78 am~~L~~~V~~-----~l~~~Gv~av~~~P~s~~~~~gr~~-----~~~l~~i~~~l~~gfvPvl~G-DVv~d~~----- 141 (252)
T COG1608 78 AMLELNSIVVD-----ALLDAGVRAVSVVPISFSTFNGRIL-----YTYLEAIKDALEKGFVPVLYG-DVVPDDD----- 141 (252)
T ss_pred HHHHHHHHHHH-----HHHhcCCccccccCcceeecCCcee-----echHHHHHHHHHcCCEeeeec-ceEEcCC-----
Confidence 55555444444 3444554442 2221122211 122578999999999999999 8887742
Q ss_pred CCceeecchhHHHHHHhhcCCCEEEEeccCCccccCCCC-CcCccccceeeccchhhHHhcCCCCCcccCChHHHHHHHH
Q 005074 169 SSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAY 247 (715)
Q Consensus 169 ~~~~~~~~D~~A~~lA~~L~A~~li~lTDVdGV~~~dP~-~p~a~~i~~is~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~ 247 (715)
.+..++++|.++.+||..|++|+++|+|||||||+.||. .|+.+.++++..... ..|+.+.++||||..|+++++
T Consensus 142 ~g~~IiSGDdIv~~LA~~l~pd~v~f~tdVdGVy~~~p~~~p~~~~l~~i~~~~~----~~gs~~~DVTGGi~~Kl~~~~ 217 (252)
T COG1608 142 NGYEIISGDDIVLHLAKELKPDRVIFLTDVDGVYDRDPGKVPDARLLSEIEGRVA----LGGSGGTDVTGGIAKKLEALL 217 (252)
T ss_pred CceEEEeccHHHHHHHHHhCCCEEEEEecCCceecCCCCcCccccchhhhhhhhh----hcCcCcccchhhHHHHHHHHH
Confidence 355679999999999999999999999999999999994 888888877755322 245555799999999999999
Q ss_pred HHHHcCCcEEEEeCCCcchHHHHHcCCcceeEEe
Q 005074 248 CAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFH 281 (715)
Q Consensus 248 ~a~~~gv~v~I~~g~~~~~l~~~~tg~~iGT~i~ 281 (715)
...+++.+|+|+||..++++..++.|+.+||.+.
T Consensus 218 ~~~~~~~~vyi~ng~~~~ni~~~l~G~~vGT~I~ 251 (252)
T COG1608 218 EIARYGKEVYIFNGNKPENIYRALRGENVGTRID 251 (252)
T ss_pred HHHhcCceEEEECCCCHHHHHHHhcCCCCceEec
Confidence 9999999999999999999999999999999874
No 147
>cd07080 ALDH_Acyl-CoA-Red_LuxC Acyl-CoA reductase LuxC. Acyl-CoA reductase, LuxC, (EC=1.2.1.50) is the fatty acid reductase enzyme responsible for synthesis of the aldehyde substrate for the luminescent reaction catalyzed by luciferase. The fatty acid reductase, a luminescence-specific, multienzyme complex (LuxCDE), reduces myristic acid to generate the long chain fatty aldehyde required for the luciferase-catalyzed reaction resulting in the emission of blue-green light. Mutational studies of conserved cysteines of LuxC revealed that the cysteine which aligns with the catalytic cysteine conserved throughout the ALDH superfamily is the LuxC acylation site. This CD is composed of mainly bacterial sequences but also includes a few archaeal sequences similar to the Methanospirillum hungateiacyl acyl-CoA reductase RfbN.
Probab=99.97 E-value=1.5e-30 Score=288.35 Aligned_cols=318 Identities=13% Similarity=0.080 Sum_probs=234.4
Q ss_pred hHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHH---HHHHHHHHHhhchhHHHHHHhhcChhHHHHHH
Q 005074 292 GAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVE---NEADVAAAQEAGYAKSLVSRLALKPGKISSLA 368 (715)
Q Consensus 292 ~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~---~~~d~~~~~~~g~~~~~~~~~~~~~~~i~~~~ 368 (715)
-+++.++..+++++.|..-+...|...|+++...+..+.+.+.++ +..++.+. .+...+
T Consensus 25 ~~~~iv~~l~~~~~~~~~~~~~~r~~~l~~l~~~~~~~~~~~~~a~~~l~~~~~r~------------------~l~~~l 86 (422)
T cd07080 25 PVEEIVDFLDRAGKRLLDPDYPLRQQAERLLPTVTGYSEEMLREGLKRLMALFRRE------------------NLERIL 86 (422)
T ss_pred CHHHHHHHHHHHHHHhcCCCchHHHHHHHhhhhccCCCHHHHHHHHHHHHHHcCHH------------------HHHHHH
Confidence 467788888999999999999999999999999999888888776 33332111 111111
Q ss_pred HHHHHHhcccccccccccccccCCCeEEEEeeeceeEEEEEcCC-ChhhHHHHHHHHHHhCCEEEEeCCcchHHHHHHHH
Q 005074 369 KSIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILH 447 (715)
Q Consensus 369 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~~~~~~~~~ALaaGN~vvlKps~~tp~t~~~l~ 447 (715)
.. .+ +..+...+ +. +.+...+++++|+|||++|+|| +|.+.++++++||++||++|+|||+.+|.++..++
T Consensus 87 ~~--el-~~~~~Ld~----w~-~~~~~~~~~~~P~Gvv~~I~p~N~P~l~~~s~~~aLlaGN~~ilKpS~~~p~~~~~l~ 158 (422)
T cd07080 87 ER--EL-GSPGILDE----WV-PPGRGGYIRAQPRGLVVHIIAGNVPLLPVWSIVRGLLVKNVNLLKMSSSDPLTATALL 158 (422)
T ss_pred HH--hc-CCcccccC----Cc-cCCCCCeeEEcCCceEEEEccCCccccHHHHHHHHHHhcCceEEECCCccchHHHHHH
Confidence 11 00 00000111 11 0123446789999999999998 58888899999999999999999999999999999
Q ss_pred HHHHHhcccccCc----CceEEec--C-cchhhHhhcCCCCccEEEeecCHHHHHHHHhhcC-CCEEEecCCc-ceEEEc
Q 005074 448 KVITSAIPDTVGE----KLIGLVT--S-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK-IPVLGHADGI-CHVYVD 518 (715)
Q Consensus 448 ~~~~~al~~alP~----gvv~vv~--~-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a~-~~~~lElGGk-~p~iV~ 518 (715)
+++.+ ++|+ +.++++. | ++++++.|..++ |+|+||||+++|+.|++.+. .+.++|+||| +++|++
T Consensus 159 ~~l~~----~~p~~~~~~~~~vv~~~g~~~~~~~~l~~~~--D~i~~~Gs~~~~~~i~~~a~~~~~~Le~Ggk~s~~vi~ 232 (422)
T cd07080 159 RSLAD----VDPNHPLTDSISVVYWPGGDAELEERILASA--DAVVAWGGEEAVKAIRSLLPPGCRLIDFGPKYSFAVID 232 (422)
T ss_pred HHHHh----cCCCCcccceEEEEEecCCchHHHHHHHHhC--CEEEEeCCHHHHHHHHHhCCCCCeeeecCCceeEEEec
Confidence 99986 5888 8899984 4 444777777776 99999999999999998875 5689999999 556666
Q ss_pred CCC----CHHHHHHHHHhhccCCCc-cccccceEEEcCcc---cCchhHHHHHHHHHhcCCeEecCc-cc----------
Q 005074 519 KSA----NLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDL---ACNGALNELVVELQHEGVGLFGGP-RA---------- 579 (715)
Q Consensus 519 ~dA----Dl~~A~~~iv~~~f~n~g-~C~a~~rv~V~~~i---~d~~f~~~l~~~~~~~~~~~~g~~-~~---------- 579 (715)
++| |++++++.+++++|.|+| .|+|++++|||+++ + ++|.++|.++++++........ ..
T Consensus 233 ~~a~~~~dl~~aa~~~a~~~~~~~gQ~C~sp~~v~V~~~~~~~~-~~f~~~l~~~l~~~~~~~p~~~~~~~~~~~~~~~r 311 (422)
T cd07080 233 REALESEKLAEVADALAEDICRYDQQACSSPQVVFVEKDDDEEL-REFAEALAAALERLPRRYPALSLSAAESAKIARAR 311 (422)
T ss_pred HHhhccccHHHHHHHHHHHHHHHhhhhccCCeEEEEECCCCchH-HHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHH
Confidence 669 999999999999999987 99999999999999 9 7999999999987632111100 00
Q ss_pred --------ccc-c-c----C--CCCCCccccccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEecCHHHHHHHHHhcCc
Q 005074 580 --------SKL-L-Q----I--PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDS 643 (715)
Q Consensus 580 --------~~~-~-p----v--~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~i~t~d~~~~~~~~~~l~~ 643 (715)
... . . | ....-...-.++=.+.|.++++++|++..+|. |=-|.++|..+.+. .++++++-.
T Consensus 312 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~r~v~v~~v~~l~~~l~~~~~--~lQTvg~~~~~~~~-~~~~~~l~~ 388 (422)
T cd07080 312 LEAEFYELKGGVSRDLGWTVIISDEIGLEASPLNRTVNVKPVASLDDVLRPVTP--YLQTVGLAPSPAEL-AELADALAA 388 (422)
T ss_pred HHHHHHHHhcCCCCCCCeEEEEeCCCCccCCCCcCEEEEEEcchHHHHHHhhhh--hcceeEeecChhhH-HHHHHHHHH
Confidence 000 0 0 1 11111111233446788899999999999985 77899999998887 677777654
Q ss_pred ce
Q 005074 644 AA 645 (715)
Q Consensus 644 G~ 645 (715)
-.
T Consensus 389 ~G 390 (422)
T cd07080 389 AG 390 (422)
T ss_pred cC
Confidence 43
No 148
>TIGR00746 arcC carbamate kinase. The seed alignment for this model includes experimentally confirmed examples from a set of phylogenetically distinct species. In a neighbor-joining tree constructed from an alignment of candidate carbamate kinases and several acetylglutamate kinases, the latter group forms a clear outgroup which roots the tree of carbamate kinase-like proteins. This analysis suggests that in E. coli, the ArcC paralog YqeA may be a second isozyme, while the paralog YahI branches as an outlier and is less likely to be an authentic carbamate kinase. The homolog from Mycoplasma pneumoniae likewise branches outside the set containing known carbamate kinases and also scores below the trusted cutoff.
Probab=99.97 E-value=1.3e-30 Score=273.27 Aligned_cols=243 Identities=22% Similarity=0.322 Sum_probs=186.7
Q ss_pred ceEEEEeCCcccccCCC----cccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhcccCCCcccccCccccc
Q 005074 15 KRLVVKVGTAVVTRSDG----RLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNEL 90 (715)
Q Consensus 15 k~~VIKiGGs~l~~~~~----~~~~~~l~~l~~~I~~l~~~G~~vviVhGgg~~i~~~~l~~~~~~~~~~~~~~~~~~~l 90 (715)
|++|||+||+++.++++ ..+.++++.++++|+.|.+.|+++|||||||+++|...++..... ..+...
T Consensus 1 ~riViklGgnaL~~~g~~~~~~~~~~~i~~~a~~ia~l~~~g~~vviv~gngpqvG~~~l~~~~~~----~~~~~~---- 72 (310)
T TIGR00746 1 KRVVVALGGNALLQRGEKGSAEAQRDNVRQTAPQIAKLIKRGYELVITHGNGPQVGNLLLQNQAAD----SEVPAM---- 72 (310)
T ss_pred CeEEEEECHHHhCCCCCCCCcchhHHHHHHHHHHHHHHHHCCCEEEEEECChHHHHHHHhcccccc----ccCCCC----
Confidence 68999999999997542 245778999999999999999999999999999998766432211 111111
Q ss_pred hHHHHHHcchHHHHHHHHHHhh----cCCCC------cceEEecccc--cCchhHH------------------------
Q 005074 91 DGKACAAVGQSSLMALYDTLFS----QLDVT------SSQLLVTDSD--FRDEDFR------------------------ 134 (715)
Q Consensus 91 ~~~~~~a~G~~~~~~l~~~~l~----~~g~~------~~~~~~~~~d--~~~~~~~------------------------ 134 (715)
..+++.|.+|..++.+++..|+ .+|+. ..|++++..| |.++...
T Consensus 73 p~~~~~A~~qg~lg~~~~~~l~~~l~~~g~~~~v~~~vtqv~v~~~D~af~~p~k~ig~~y~~~~a~~~~~~~~~~~~~d 152 (310)
T TIGR00746 73 PLDVLGAMSQGMIGYMLQQALNNELPKRGMEKPVATVLTQTIVDPKDPAFQNPTKPIGPFYTEEEAKRLAAEKGWIVKED 152 (310)
T ss_pred cchHHHHhhHHHHHHHHHHHHHHHHHhcCCCccceEEEEEEEECCCcccccCCCCcCCCCcCHHHHHHHHHHcCCeEeec
Confidence 1257888999888877788777 66743 3577777666 5443222
Q ss_pred ----------------hHHHHHHHHHHhCCC---------eEEEeCCCceeccCCCCCCCCceeecchhHHHHHHhhcCC
Q 005074 135 ----------------KQLYDTVQSLLDLRV---------IPIFNENDAVSTRKAPYEDSSGIFWDNDSLAGLLALELKA 189 (715)
Q Consensus 135 ----------------~~~~~~i~~ll~~g~---------iPVv~g~d~v~~~~~~~~~~~~~~~~~D~~A~~lA~~L~A 189 (715)
.++.+.|+.||++|. +||+++||.+... ..++|+|++|+.+|.+|+|
T Consensus 153 ~~~~~rrvv~sp~p~~iv~~~~I~~LL~~G~iVI~~ggggiPvi~e~~~~~g~--------e~~id~D~lAa~lA~~l~A 224 (310)
T TIGR00746 153 AGRGWRRVVPSPRPKDIVEAETIKTLVENGVIVISSGGGGVPVVLEGAELKGV--------EAVIDKDLASEKLAEEVNA 224 (310)
T ss_pred CCCcceEeecCCCchhhccHHHHHHHHHCCCEEEeCCCCCcCEEecCCeEEee--------EecCCHHHHHHHHHHHhCC
Confidence 145689999999999 4444443333211 0138999999999999999
Q ss_pred CEEEEeccCCccccCCCCCcCccccceeeccchhhHHhcCCCCCcccCChHHHHHHHHHHHHcC-CcEEEEeCCCcchHH
Q 005074 190 DLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAG-IPVVITSGFAMDSII 268 (715)
Q Consensus 190 ~~li~lTDVdGV~~~dP~~p~a~~i~~is~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a~~~g-v~v~I~~g~~~~~l~ 268 (715)
|+|+|+|||||||+++ .+|++++|++++++|+.+++.. +.+.+|||.+|+++|..++++| .+++|++ ++.+.
T Consensus 225 D~LIiLTDVdGVy~~~-~~p~a~~i~~it~~e~~~~~~~---g~~~tGgM~~Kl~AA~~~~~~g~~~v~I~~---~~~i~ 297 (310)
T TIGR00746 225 DILVILTDVDAVYINY-GKPDEKALREVTVEELEDYYKA---GHFAAGSMGPKVEAAIEFVESGGKRAIITS---LENAV 297 (310)
T ss_pred CEEEEEeCCCceeCCC-CCCCCcCCcCcCHHHHHHHHhc---CCcCCCCcHHHHHHHHHHHHhCCCeEEEec---hHHHH
Confidence 9999999999999974 5789999999999998876643 3477999999999999998876 4599998 78889
Q ss_pred HHHcCCcceeEEe
Q 005074 269 KVLEGKRVGTLFH 281 (715)
Q Consensus 269 ~~~tg~~iGT~i~ 281 (715)
+++.|+ .||.+.
T Consensus 298 ~~l~G~-~GT~I~ 309 (310)
T TIGR00746 298 EALEGK-AGTRVT 309 (310)
T ss_pred HHHCCC-CCcEEe
Confidence 999998 899874
No 149
>cd04237 AAK_NAGS-ABP AAK_NAGS-ABP: N-acetylglutamate (NAG) kinase-like domain of the NAG Synthase (NAGS) of the arginine-biosynthesis pathway (ABP) found in gamma- and beta-proteobacteria and higher plant chloroplasts. Domain architecture of these NAGS consisted of an N-terminal NAG kinase-like (ArgB) domain (this CD) and a C-terminal NAG synthase, acetyltransferase (ArgA) domain. Both bacterial and plant sequences in this CD have a conserved N-terminal extension; a similar sequence in the NAG kinases of the cyclic arginine-biosynthesis pathway has been implicated in feedback inhibition sensing. Plant sequences also have an N-terminal chloroplast transit peptide and an insert (approx. 70 residues) in the C-terminal region of ArgB. Members of this CD belong to the Amino Acid Kinase Superfamily (AAK).
Probab=99.97 E-value=3.2e-30 Score=269.70 Aligned_cols=242 Identities=20% Similarity=0.297 Sum_probs=175.6
Q ss_pred cceEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhcccCCCccc-ccCccccchH
Q 005074 14 VKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLAD-LQKPQNELDG 92 (715)
Q Consensus 14 ~k~~VIKiGGs~l~~~~~~~~~~~l~~l~~~I~~l~~~G~~vviVhGgg~~i~~~~l~~~~~~~~~~~~-~~~~~~~l~~ 92 (715)
.|++|||+||+++.++. +..++++|+.|++.|+++|||||||+++++.+. ..++.+.|.+ ++.++++...
T Consensus 18 ~~~~VIKlGG~ai~~~~-------l~~~~~~ia~l~~~g~~~ViVHGggp~i~~~~~--~~gi~~~~~~G~RvT~~~~l~ 88 (280)
T cd04237 18 GKTFVIAFGGEAVAHPN-------FDNIVHDIALLHSLGIRLVLVHGARPQIDQRLA--ERGLEPRYHRGLRITDAAALE 88 (280)
T ss_pred CCEEEEEEChHHhcCch-------HHHHHHHHHHHHHCCCcEEEEeCCCHHHHHHHH--HcCCCccccCCcCcCCHHHHH
Confidence 47999999999998754 789999999999999999999999999998764 3344444432 3333222111
Q ss_pred HHHHHcchHH--HHHHHHHHhhcCCCCcceEEeccc--------------ccCchhHH-hHHHHHHHHHHhCCCeEEEeC
Q 005074 93 KACAAVGQSS--LMALYDTLFSQLDVTSSQLLVTDS--------------DFRDEDFR-KQLYDTVQSLLDLRVIPIFNE 155 (715)
Q Consensus 93 ~~~~a~G~~~--~~~l~~~~l~~~g~~~~~~~~~~~--------------d~~~~~~~-~~~~~~i~~ll~~g~iPVv~g 155 (715)
-...+.|+.. +...+...+.+.|++...+...++ +++..+.. ..+.+.|+.+|++|++||+.+
T Consensus 89 ~~~~~~g~v~~~l~~~l~~~~~a~~~~~~~~~~~~~~~v~~~~~~~~~~~~~g~~G~v~~v~~~~i~~lL~~g~ipv~~~ 168 (280)
T cd04237 89 CVKEAAGAVRLEIEALLSMGLPNSPMAGARIRVVSGNFVTARPLGVVDGVDFGHTGEVRRIDADAIRRQLDQGSIVLLSP 168 (280)
T ss_pred HHHHHHHHHHHHHHHHHHhhccccCcCCCceEEecCeEEEEEECCcccCceEeeeccEEEEcHHHHHHHHHCCCEEEECC
Confidence 1222234433 222233344444333212211111 12112221 246899999999999999975
Q ss_pred CCceeccCCCCCCCCcee-ecchhHHHHHHhhcCCCEEEEeccCCccccCCCCCcCccccceeeccchhhHHhcCCCCCc
Q 005074 156 NDAVSTRKAPYEDSSGIF-WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRV 234 (715)
Q Consensus 156 ~d~v~~~~~~~~~~~~~~-~~~D~~A~~lA~~L~A~~li~lTDVdGV~~~dP~~p~a~~i~~is~~e~~~~~~~g~~~~~ 234 (715)
++++..+..+ +|+|.+|..||.+|+|++|+|+|||||||++ ++++|++++.+|+++++..+. .
T Consensus 169 --------~g~~~~g~~lnvnaD~~A~~LA~~L~a~klv~ltdv~GV~~~-----~~~~i~~i~~~e~~~l~~~~~---~ 232 (280)
T cd04237 169 --------LGYSPTGEVFNLSMEDVATAVAIALKADKLIFLTDGPGLLDD-----DGELIRELTAQEAEALLETGA---L 232 (280)
T ss_pred --------ceECCCCCEEeeCHHHHHHHHHHHcCCCEEEEEeCCCcccCC-----CCCccccCCHHHHHHHHHcCC---C
Confidence 2233355556 8999999999999999999999999999975 278999999999998887652 2
Q ss_pred ccCChHHHHHHHHHHHHcCCc-EEEEeCCCcchH-HHHHcCCcceeEE
Q 005074 235 GRGGMTAKVNAAYCAACAGIP-VVITSGFAMDSI-IKVLEGKRVGTLF 280 (715)
Q Consensus 235 ~~ggM~~Kl~aa~~a~~~gv~-v~I~~g~~~~~l-~~~~tg~~iGT~i 280 (715)
.+|||+||+++|+.++++|++ +||+|+..++.+ .++++.+..||.+
T Consensus 233 ~~ggM~~Kv~~a~~a~~~Gv~~v~I~~~~~~~~ll~elft~~g~GT~i 280 (280)
T cd04237 233 LTNDTARLLQAAIEACRGGVPRVHLISYAEDGALLLELFTRDGVGTLI 280 (280)
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHhcCCCCCCcC
Confidence 489999999999999999996 999999999998 7789988889864
No 150
>CHL00202 argB acetylglutamate kinase; Provisional
Probab=99.97 E-value=3.6e-30 Score=270.09 Aligned_cols=242 Identities=19% Similarity=0.287 Sum_probs=176.2
Q ss_pred cceEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhcccCCCccc-ccCcc---cc
Q 005074 14 VKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLAD-LQKPQ---NE 89 (715)
Q Consensus 14 ~k~~VIKiGGs~l~~~~~~~~~~~l~~l~~~I~~l~~~G~~vviVhGgg~~i~~~~l~~~~~~~~~~~~-~~~~~---~~ 89 (715)
.+++|||+||+++.++. ....++++|+.|+..|.++|||||||+++.+.+ +++ ++.+.|.+ ++.++ +.
T Consensus 23 ~~~~VIk~gG~~~~~~~------l~~~~~~di~~l~~~g~~~VlVHGgg~~i~~~~-~~~-g~~~~~~~G~rvT~~~~l~ 94 (284)
T CHL00202 23 GRIMVIKYGGAAMKNLI------LKADIIKDILFLSCIGLKIVVVHGGGPEINFWL-KQL-NISPKFWNGIRVTDKVTME 94 (284)
T ss_pred CCeEEEEEChHHhcCcc------hHHHHHHHHHHHHHCCCcEEEEeCCcHHHHHHH-HHC-CCCCEeECCcccCCHHHHH
Confidence 68999999999997654 145899999999999999999999999887754 333 34434432 33322 22
Q ss_pred chHHHHHHcchHHHHHHHHHHhhcCCCCcceEE------ecc-----cccCchhH-HhHHHHHHHHHHhCCCeEEEeCCC
Q 005074 90 LDGKACAAVGQSSLMALYDTLFSQLDVTSSQLL------VTD-----SDFRDEDF-RKQLYDTVQSLLDLRVIPIFNEND 157 (715)
Q Consensus 90 l~~~~~~a~G~~~~~~l~~~~l~~~g~~~~~~~------~~~-----~d~~~~~~-~~~~~~~i~~ll~~g~iPVv~g~d 157 (715)
...+ ..+|+.. ..+...|...|+++..+. ++. .++...+. ...+.+.|+.+|++|+|||+++
T Consensus 95 ~~~~--~l~g~ln--~~lv~~L~~~Gv~av~l~~~d~~~i~a~~~~~~d~~~~G~i~~v~~~~i~~ll~~g~iPVi~~-- 168 (284)
T CHL00202 95 IVEM--VLAGKVN--KDLVGSINANGGKAVGLCGKDANLIVARASDKKDLGLVGEIQQVDPQLIDMLLEKNYIPVIAS-- 168 (284)
T ss_pred HHHH--HHhhHHH--HHHHHHHHhCCCCeeeeeeccCCEEEEEeCCCcccccceeEEecCHHHHHHHHHCCCEEEECC--
Confidence 1111 1223222 123455566666554332 221 12222222 2245789999999999999985
Q ss_pred ceeccCCCCCCCCcee-ecchhHHHHHHhhcCCCEEEEeccCCccccCCCCCcCccccceeeccchhhHHhcCCCCCccc
Q 005074 158 AVSTRKAPYEDSSGIF-WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGR 236 (715)
Q Consensus 158 ~v~~~~~~~~~~~~~~-~~~D~~A~~lA~~L~A~~li~lTDVdGV~~~dP~~p~a~~i~~is~~e~~~~~~~g~~~~~~~ 236 (715)
+ +++..+..+ +|+|++|+.+|.+|+|++|+|+|||||||+++ .+| +++|++++++|+++++..+ +++
T Consensus 169 -~-----~~~~~g~~~ni~~D~~A~~lA~~l~Ad~li~lTdv~Gv~~~~-~d~-~~~i~~i~~~e~~~l~~~g----~~t 236 (284)
T CHL00202 169 -V-----AADHDGQTYNINADVVAGEIAAKLNAEKLILLTDTPGILADI-NDP-NSLISTLNIKEARNLASTG----IIS 236 (284)
T ss_pred -C-----ccCCCCcEEecCHHHHHHHHHHHhCCCEEEEEeCChhhcCCC-CCC-CCccccccHHHHHHHHhcC----CCC
Confidence 1 222245555 89999999999999999999999999999853 234 4799999999998876543 789
Q ss_pred CChHHHHHHHHHHHHcCCc-EEEEeCCCcchH-HHHHcCCcceeEEe
Q 005074 237 GGMTAKVNAAYCAACAGIP-VVITSGFAMDSI-IKVLEGKRVGTLFH 281 (715)
Q Consensus 237 ggM~~Kl~aa~~a~~~gv~-v~I~~g~~~~~l-~~~~tg~~iGT~i~ 281 (715)
|||.+|+++|..++++|++ +||+||+.++.+ .++++++..||.+.
T Consensus 237 GGM~~Kl~aa~~a~~~Gv~~v~I~~g~~~~~ll~el~~~~g~GT~i~ 283 (284)
T CHL00202 237 GGMIPKVNCCIRALAQGVEAAHIIDGKEKHALLLEILTEKGIGSMLV 283 (284)
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeCCCCCChHHHHHhcCCCCceEEe
Confidence 9999999999999999998 999999999985 99999999999874
No 151
>PLN02512 acetylglutamate kinase
Probab=99.97 E-value=1.1e-29 Score=269.15 Aligned_cols=243 Identities=21% Similarity=0.278 Sum_probs=177.2
Q ss_pred ccceEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhcccCCCccc-ccCcc---c
Q 005074 13 DVKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLAD-LQKPQ---N 88 (715)
Q Consensus 13 ~~k~~VIKiGGs~l~~~~~~~~~~~l~~l~~~I~~l~~~G~~vviVhGgg~~i~~~~l~~~~~~~~~~~~-~~~~~---~ 88 (715)
.+|++||||||+++++++ ....++++|+.|+..|.++|||||||+++...+ ..+ ++.+.|.+ +..++ +
T Consensus 46 ~~~tiVIKlGGs~i~d~~------~~~~~~~di~~l~~~g~~iVlVHGgG~~i~~~~-~~~-gi~~~~~~G~rvT~~~~l 117 (309)
T PLN02512 46 RGKTVVVKYGGAAMKDPE------LKAGVIRDLVLLSCVGLRPVLVHGGGPEINSWL-KKV-GIEPQFKNGLRVTDAETM 117 (309)
T ss_pred CCCeEEEEECCeeccChh------HHHHHHHHHHHHHHCCCCEEEEECCcHHHHHHH-HHc-CCCCcCCCCCcCCCHHHH
Confidence 368999999999999875 246789999999999999999999988776644 322 33333332 22222 1
Q ss_pred cchHHHHHHcchHHHHHHHHHHhhcCCCCcceEE------eccc------ccCchhH-HhHHHHHHHHHHhCCCeEEEeC
Q 005074 89 ELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLL------VTDS------DFRDEDF-RKQLYDTVQSLLDLRVIPIFNE 155 (715)
Q Consensus 89 ~l~~~~~~a~G~~~~~~l~~~~l~~~g~~~~~~~------~~~~------d~~~~~~-~~~~~~~i~~ll~~g~iPVv~g 155 (715)
+...+ ..+|. +...+...|.+.|+++..+. ++.. ++...+. ...+.+.|+.+|+.|+|||++|
T Consensus 118 ei~~~--~l~g~--ln~~lv~~L~~~Gv~av~l~g~d~~~i~a~~~~~~~~~~~~G~i~~v~~~~i~~lL~~g~IPVi~~ 193 (309)
T PLN02512 118 EVVEM--VLVGK--VNKSLVSLINKAGGTAVGLSGKDGRLLRARPSPNSADLGFVGEVTRVDPTVLRPLVDDGHIPVIAT 193 (309)
T ss_pred HHHHH--HHhhH--HHHHHHHHHHHcCCCeEEeehhhCCEEEEEEcCcCccccccceeeecCHHHHHHHHhCCCEEEEeC
Confidence 11111 11222 22234466777777665442 2211 2222222 2245789999999999999997
Q ss_pred CCceeccCCCCCCCCcee-ecchhHHHHHHhhcCCCEEEEeccCCccccCCCCCcCccccceeeccchhhHHhcCCCCCc
Q 005074 156 NDAVSTRKAPYEDSSGIF-WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRV 234 (715)
Q Consensus 156 ~d~v~~~~~~~~~~~~~~-~~~D~~A~~lA~~L~A~~li~lTDVdGV~~~dP~~p~a~~i~~is~~e~~~~~~~g~~~~~ 234 (715)
. .+ +..+..+ +|+|++|++||.+|+|++|+|+|||||||++|| +++++|++|+++|+.+++..+ +
T Consensus 194 ~-~~-------d~~g~~~~i~~D~~A~~lA~~L~Ad~li~lTdV~GV~~~~~--~~~~lI~~i~~~e~~~l~~~~----~ 259 (309)
T PLN02512 194 V-AA-------DEDGQAYNINADTAAGEIAAALGAEKLILLTDVAGVLEDKD--DPGSLVKELDIKGVRKLIADG----K 259 (309)
T ss_pred c-eE-------CCCCCEeccCHHHHHHHHHHHcCCCEEEEEeCCcceeCCCC--CCcCCCcccCHHHHHHHHhCC----C
Confidence 2 21 1234445 899999999999999999999999999998764 347899999999998876543 7
Q ss_pred ccCChHHHHHHHHHHHHcCCc-EEEEeCCCcchH-HHHHcCCcceeEEe
Q 005074 235 GRGGMTAKVNAAYCAACAGIP-VVITSGFAMDSI-IKVLEGKRVGTLFH 281 (715)
Q Consensus 235 ~~ggM~~Kl~aa~~a~~~gv~-v~I~~g~~~~~l-~~~~tg~~iGT~i~ 281 (715)
++|||.+|+++|..++++|++ |+|+||..++.+ .++++++..||++.
T Consensus 260 vtGGM~~Kl~aa~~a~~~Gv~~v~I~~g~~~~~ll~~l~~~~~~GT~I~ 308 (309)
T PLN02512 260 IAGGMIPKVECCVRSLAQGVKTAHIIDGRVPHSLLLEILTDEGAGTMIT 308 (309)
T ss_pred CCCcHHHHHHHHHHHHHcCCCEEEEecCCCCChHHHHHhcCCCCeeEEe
Confidence 899999999999999999997 999999999887 67888888999875
No 152
>PRK00942 acetylglutamate kinase; Provisional
Probab=99.97 E-value=1.2e-29 Score=267.10 Aligned_cols=240 Identities=22% Similarity=0.303 Sum_probs=178.4
Q ss_pred cceEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhcccCCCcc-cccCc---ccc
Q 005074 14 VKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLA-DLQKP---QNE 89 (715)
Q Consensus 14 ~k~~VIKiGGs~l~~~~~~~~~~~l~~l~~~I~~l~~~G~~vviVhGgg~~i~~~~l~~~~~~~~~~~-~~~~~---~~~ 89 (715)
++++||||||+++++++ .+.+++++|+.+++.|.++|||||||+++.... ..+ +...++. .+..+ ++.
T Consensus 23 ~~~iViK~GGs~l~~~~------~~~~l~~~i~~l~~~g~~vVlVhGgg~~~~~~~-~~~-g~~~~~~~g~~~t~~~~l~ 94 (283)
T PRK00942 23 GKTIVIKYGGNAMTDEE------LKEAFARDIVLLKQVGINPVVVHGGGPQIDELL-KKL-GIESEFVNGLRVTDAETME 94 (283)
T ss_pred CCeEEEEEChHHhcCcc------hHHHHHHHHHHHHHCCCCEEEEeCChHHHHHHH-HHC-CCCcEeeCCEecCCHHHHH
Confidence 57999999999999876 267899999999999999999999988776644 222 2222221 11111 112
Q ss_pred chHHHHHHcchHHHHHHHHHHhhcCCCCcceEE------eccccc------CchhH-HhHHHHHHHHHHhCCCeEEEeCC
Q 005074 90 LDGKACAAVGQSSLMALYDTLFSQLDVTSSQLL------VTDSDF------RDEDF-RKQLYDTVQSLLDLRVIPIFNEN 156 (715)
Q Consensus 90 l~~~~~~a~G~~~~~~l~~~~l~~~g~~~~~~~------~~~~d~------~~~~~-~~~~~~~i~~ll~~g~iPVv~g~ 156 (715)
+..+ ...|+.. ..+...|..+|+++.++. ++...+ ...+. ...+.+.|+.+|++|.|||+++
T Consensus 95 ~~~~--a~~G~l~--~~i~~~L~~~Gv~a~~l~~~~~~~~ta~~~~~~~~~~~~g~i~~i~~~~l~~ll~~g~vpVv~~- 169 (283)
T PRK00942 95 VVEM--VLAGKVN--KELVSLINKHGGKAVGLSGKDGGLITAKKLEEDEDLGFVGEVTPVNPALLEALLEAGYIPVISP- 169 (283)
T ss_pred HHHH--HHcCchH--HHHHHHHHhCCCCccceeeccCCEEEEEECCCCCCCccccceEEECHHHHHHHHHCCCEEEEcC-
Confidence 1111 2225433 344577888888766543 332222 11111 2245789999999999999985
Q ss_pred CceeccCCCCCCCCcee-ecchhHHHHHHhhcCCCEEEEeccCCccccCCCCCcCccccceeeccchhhHHhcCCCCCcc
Q 005074 157 DAVSTRKAPYEDSSGIF-WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVG 235 (715)
Q Consensus 157 d~v~~~~~~~~~~~~~~-~~~D~~A~~lA~~L~A~~li~lTDVdGV~~~dP~~p~a~~i~~is~~e~~~~~~~g~~~~~~ 235 (715)
+. ++..+..+ +|+|++|+.||.+|+|++|+|+|||||||++ ++++|++|+++|+.+++..+ ++
T Consensus 170 --~~-----~~~~g~~~~l~~D~~A~~lA~~l~A~~li~~tdv~Gv~~~-----~~~~i~~i~~~e~~~~~~~~----~~ 233 (283)
T PRK00942 170 --IG-----VGEDGETYNINADTAAGAIAAALGAEKLILLTDVPGVLDD-----KGQLISELTASEAEELIEDG----VI 233 (283)
T ss_pred --cE-----ECCCCcEEEECHHHHHHHHHHHcCCCEEEEEECCcccccC-----CCcccccCCHHHHHHHHHcC----CC
Confidence 12 22244444 9999999999999999999999999999987 37899999999998876543 68
Q ss_pred cCChHHHHHHHHHHHHcCCc-EEEEeCCCcch-HHHHHcCCcceeEEec
Q 005074 236 RGGMTAKVNAAYCAACAGIP-VVITSGFAMDS-IIKVLEGKRVGTLFHR 282 (715)
Q Consensus 236 ~ggM~~Kl~aa~~a~~~gv~-v~I~~g~~~~~-l~~~~tg~~iGT~i~~ 282 (715)
+|||.+|+++|..++++|++ |+|+|++.+++ +.+.++++..||.+.+
T Consensus 234 tggm~~Kl~~a~~~~~~gv~~v~I~~g~~~~~ll~~~~~~~~~GT~i~~ 282 (283)
T PRK00942 234 TGGMIPKVEAALDAARGGVRSVHIIDGRVPHALLLELFTDEGIGTMIVP 282 (283)
T ss_pred CCchHHHHHHHHHHHHhCCCEEEEeCCCCCchHHHHHhcCCCcceEEec
Confidence 99999999999999999986 99999999999 7999999999999865
No 153
>PRK12352 putative carbamate kinase; Reviewed
Probab=99.97 E-value=4.9e-29 Score=261.68 Aligned_cols=257 Identities=18% Similarity=0.218 Sum_probs=181.7
Q ss_pred cceEEEEeCCcccccCCCc--c--cHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhcccCCCcccccCcccc
Q 005074 14 VKRLVVKVGTAVVTRSDGR--L--ALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNE 89 (715)
Q Consensus 14 ~k~~VIKiGGs~l~~~~~~--~--~~~~l~~l~~~I~~l~~~G~~vviVhGgg~~i~~~~l~~~~~~~~~~~~~~~~~~~ 89 (715)
.|++|||+||+++.+++.. . +.+++..++++|+.|+..|+++|||||||||++..+.+ .++.+.|..++.++..
T Consensus 2 ~k~iVI~lGGnAl~~~~~~~~~~~~~~~~~~~a~dia~l~~~G~~lVivHG~GPqI~~~l~~--~~~~~~~~g~rvt~~~ 79 (316)
T PRK12352 2 KELVVVAIGGNSIIKDNASQSIEHQAEAVKAVADTVLEMLASDYDIVLTHGNGPQVGLDLRR--AEIAHEREGLPLTPLA 79 (316)
T ss_pred CcEEEEEEChHHhcCCCCCcchhhHHHHHHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHH--cCcccccCCCCCCCHH
Confidence 4799999999999765432 2 23578999999999999999999999999999997653 3444455334433321
Q ss_pred chHHHHHHcchHH--HHHHHHHHhhcCCCCc-----ceEEec--ccccC-------------------------------
Q 005074 90 LDGKACAAVGQSS--LMALYDTLFSQLDVTS-----SQLLVT--DSDFR------------------------------- 129 (715)
Q Consensus 90 l~~~~~~a~G~~~--~~~l~~~~l~~~g~~~-----~~~~~~--~~d~~------------------------------- 129 (715)
.-...+.|..+ +...+.+.|...|..+ .++.+. ++.|.
T Consensus 80 --~~v~~~~g~i~~~i~~~L~~~l~~~g~~~~~~vvt~v~vs~~D~~f~~~~kpiG~~y~~~~a~~~~~~~~~~~~~~d~ 157 (316)
T PRK12352 80 --NCVADTQGGIGYLIQQALNNRLARHGEKKAVTVVTQVEVDKNDPGFAHPTKPIGAFFSESQRDELQKANPDWRFVEDA 157 (316)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEECCCCccccCCcccccCcccHHHHHHHhhhcCCceEeecC
Confidence 12233333222 2345567777666221 122222 12231
Q ss_pred chh----------HHhHHHHHHHHHHhCCCeEEEeCCCceeccC-CCCCCCCcee-ecchhHHHHHHhhcCCCEEEEecc
Q 005074 130 DED----------FRKQLYDTVQSLLDLRVIPIFNENDAVSTRK-APYEDSSGIF-WDNDSLAGLLALELKADLLVLLSD 197 (715)
Q Consensus 130 ~~~----------~~~~~~~~i~~ll~~g~iPVv~g~d~v~~~~-~~~~~~~~~~-~~~D~~A~~lA~~L~A~~li~lTD 197 (715)
..+ ....+.+.|+.||++|+|+|.+|...+.... ..+...+..+ +|+|.+|+.+|.+|+||+|+|+||
T Consensus 158 g~G~rrvv~sp~pv~~V~~~~I~~ll~~g~iVi~~ggggiPv~~~~~g~~~n~~~nInaD~aAa~iA~aL~AdkLI~LTD 237 (316)
T PRK12352 158 GRGYRRVVASPEPKRIVEAPAIKALIQQGFVVIGAGGGGIPVVRTDAGDYQSVDAVIDKDLSTALLAREIHADILVITTG 237 (316)
T ss_pred CCCeEEecCCCCCceEEcHHHHHHHHHCCCEEEecCCCCCCEEeCCCCCccCceeeecHHHHHHHHHHHhCCCEEEEEeC
Confidence 011 1124689999999999996666444333210 0111122234 999999999999999999999999
Q ss_pred CCccccCCCCCcCccccceeeccchhhHHhcCCCCCcccCChHHHHHHHHHHHHcCCc-EEEEeCCCcchHHHHHcCCcc
Q 005074 198 VEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIP-VVITSGFAMDSIIKVLEGKRV 276 (715)
Q Consensus 198 VdGV~~~dP~~p~a~~i~~is~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a~~~gv~-v~I~~g~~~~~l~~~~tg~~i 276 (715)
|+|||.++| +|++++|++++.+|+++++..| ....|||.||+++|+.+++.|+. +||++ ++.+.++++|+ .
T Consensus 238 V~GV~~d~~-~~~~~li~~lt~~e~~~li~~g---~i~~GgM~pKl~aA~~al~~Gv~~v~I~~---~~~i~~al~g~-~ 309 (316)
T PRK12352 238 VEKVCIHFG-KPQQQALDRVDIATMTRYMQEG---HFPPGSMLPKIIASLTFLEQGGKEVIITT---PECLPAALRGE-T 309 (316)
T ss_pred chhhccCCC-CCCcccccccCHHHHHHHHhcC---CcCCCCCHHHHHHHHHHHHhCCCeEEEcc---hHHHHHHHcCC-C
Confidence 999998865 5778899999999999888754 23368999999999999999997 99997 78899999997 8
Q ss_pred eeEEec
Q 005074 277 GTLFHR 282 (715)
Q Consensus 277 GT~i~~ 282 (715)
||.+..
T Consensus 310 GT~I~~ 315 (316)
T PRK12352 310 GTHIIK 315 (316)
T ss_pred CeEEEe
Confidence 898753
No 154
>cd04250 AAK_NAGK-C AAK_NAGK-C: N-Acetyl-L-glutamate kinase - cyclic (NAGK-C) catalyzes the phosphorylation of the gamma-COOH group of N-acetyl-L-glutamate (NAG) by ATP in the second step of arginine biosynthesis found in some bacteria and photosynthetic organisms using the non-acetylated, cyclic route of ornithine biosynthesis. In this pathway, glutamate is first N-acetylated and then phosphorylated by NAGK to give phosphoryl NAG, which is converted to NAG-ornithine. There are two variants of this pathway. In one, typified by the pathway in Thermotoga maritima and Pseudomonas aeruginosa, the acetyl group is recycled by reversible transacetylation from acetylornithine to glutamate. The phosphorylation of NAG by NAGK is feedback inhibited by arginine. In photosynthetic organisms, NAGK is the target of the nitrogen-signaling protein PII. Hexameric formation of NAGK domains appears to be essential to both arginine inhibition and NAGK-PII complex formation. NAGK-C are members of the Amino A
Probab=99.97 E-value=1.7e-29 Score=265.20 Aligned_cols=241 Identities=21% Similarity=0.303 Sum_probs=175.7
Q ss_pred cceEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhcccCCCccc-ccCcc---cc
Q 005074 14 VKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLAD-LQKPQ---NE 89 (715)
Q Consensus 14 ~k~~VIKiGGs~l~~~~~~~~~~~l~~l~~~I~~l~~~G~~vviVhGgg~~i~~~~l~~~~~~~~~~~~-~~~~~---~~ 89 (715)
++++||||||++++++. .+.+++++|+.++..|.++||||||++++.+.+. .+ +...++.+ +..++ ++
T Consensus 14 ~~~~ViKlGGs~i~~~~------~~~~~~~~i~~l~~~g~~~ViVhG~g~~~~~~l~-~~-g~~~~~~~g~r~t~~~~~~ 85 (279)
T cd04250 14 GKTVVIKYGGNAMKDEE------LKESFARDIVLLKYVGINPVVVHGGGPEINEMLK-KL-GIESEFVNGLRVTDEETME 85 (279)
T ss_pred CCEEEEEEChHHhcCcc------HHHHHHHHHHHHHHCCCCEEEEcCCcHHHHHHHH-HC-CCCCEeECCeecCCHHHHH
Confidence 57999999999999875 2578999999999999999999999887776542 22 22222221 22221 12
Q ss_pred chHHHHHHcchHHHHHHHHHHhhcCCCCcceEE------ecccc-----------cCchhH-HhHHHHHHHHHHhCCCeE
Q 005074 90 LDGKACAAVGQSSLMALYDTLFSQLDVTSSQLL------VTDSD-----------FRDEDF-RKQLYDTVQSLLDLRVIP 151 (715)
Q Consensus 90 l~~~~~~a~G~~~~~~l~~~~l~~~g~~~~~~~------~~~~d-----------~~~~~~-~~~~~~~i~~ll~~g~iP 151 (715)
+...+ ..|+.. ..+...|.+.|+++..+. ++... +...+. ...+.+.|+.+|+.|+||
T Consensus 86 ~~~~~--~~g~ln--~~l~~~L~~~Gv~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~i~~~~i~~ll~~g~IP 161 (279)
T cd04250 86 IVEMV--LVGKVN--KEIVSLINRAGGKAVGLSGKDGNLIKAKKKDATVIEEIIDLGFVGEVTEVNPELLETLLEAGYIP 161 (279)
T ss_pred HHHHH--HcCchH--HHHHHHHHHcCCCcceeecCCCCEEEEEECcccccCCCcccCcccceEEEcHHHHHHHHHCCCeE
Confidence 21111 115322 234677777777655432 22111 111111 224578999999999999
Q ss_pred EEeCCCceeccCCCCCCCCcee-ecchhHHHHHHhhcCCCEEEEeccCCccccCCCCCcCccccceeeccchhhHHhcCC
Q 005074 152 IFNENDAVSTRKAPYEDSSGIF-WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGD 230 (715)
Q Consensus 152 Vv~g~d~v~~~~~~~~~~~~~~-~~~D~~A~~lA~~L~A~~li~lTDVdGV~~~dP~~p~a~~i~~is~~e~~~~~~~g~ 230 (715)
|+++ +. .+..+..+ +|+|.+|+.+|.+|+|++|+|+|||||||++|| + ++++|++++++|+.+++..+
T Consensus 162 Vi~~---~~-----~~~~g~~~~~~~D~~A~~lA~~l~A~~li~ltdv~Gv~~~~p-~-~~~~i~~i~~~e~~~l~~~~- 230 (279)
T cd04250 162 VIAP---VG-----VGEDGETYNINADTAAGAIAAALKAEKLILLTDVAGVLDDPN-D-PGSLISEISLKEAEELIADG- 230 (279)
T ss_pred EEcC---Cc-----cCCCCcEEEeCHHHHHHHHHHHhCCCEEEEEECCcccccCCC-C-CccccccCCHHHHHHHHHcC-
Confidence 9986 11 11234445 899999999999999999999999999999988 3 37899999999998876543
Q ss_pred CCCcccCChHHHHHHHHHHHHcCCc-EEEEeCCCcchH-HHHHcCCcceeEE
Q 005074 231 KSRVGRGGMTAKVNAAYCAACAGIP-VVITSGFAMDSI-IKVLEGKRVGTLF 280 (715)
Q Consensus 231 ~~~~~~ggM~~Kl~aa~~a~~~gv~-v~I~~g~~~~~l-~~~~tg~~iGT~i 280 (715)
+++|||.+|+++|..++++|++ |+|+||+.++++ .++++++..||.+
T Consensus 231 ---~~tGgm~~Kl~~a~~a~~~g~~~v~I~~g~~~~~ll~~~~~~~~~GT~i 279 (279)
T cd04250 231 ---IISGGMIPKVEACIEALEGGVKAAHIIDGRVPHSLLLEIFTDEGIGTMI 279 (279)
T ss_pred ---CCCCchHHHHHHHHHHHHhCCCEEEEeCCCCCchHHHHHhcCCCCccCC
Confidence 7899999999999999999997 999999999975 8899998889864
No 155
>PRK14058 acetylglutamate/acetylaminoadipate kinase; Provisional
Probab=99.97 E-value=2.3e-29 Score=262.42 Aligned_cols=236 Identities=25% Similarity=0.278 Sum_probs=168.2
Q ss_pred eEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhcccCCCccc------ccCcccc
Q 005074 16 RLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLAD------LQKPQNE 89 (715)
Q Consensus 16 ~~VIKiGGs~l~~~~~~~~~~~l~~l~~~I~~l~~~G~~vviVhGgg~~i~~~~l~~~~~~~~~~~~------~~~~~~~ 89 (715)
|+||||||+++.++ .+++++|+.+++.|.++|||||||+++.+.+ +++ ++.++|.+ .+.+..+
T Consensus 1 ~~ViK~GG~~l~~~---------~~~~~~i~~l~~~g~~~VlVHGgg~~i~~~~-~~~-gi~~~~~~~~~g~~~rvt~~~ 69 (268)
T PRK14058 1 MIVVKIGGSVGIDP---------EDALIDVASLWADGERVVLVHGGSDEVNELL-ERL-GIEPRFVTSPSGVTSRYTDRE 69 (268)
T ss_pred CEEEEEChHHhhCc---------HHHHHHHHHHHHCCCCEEEEeCCHHHHHHHH-HHc-CCCceEEeCCCCCceEeCCHH
Confidence 68999999999874 3569999999999999999999988777644 333 44444432 2222111
Q ss_pred chHHHHHHcchHHHHHHHHHHhhcCCCCcceE------Eecc----------------cccCchhH-HhHHHHHHHHHHh
Q 005074 90 LDGKACAAVGQSSLMALYDTLFSQLDVTSSQL------LVTD----------------SDFRDEDF-RKQLYDTVQSLLD 146 (715)
Q Consensus 90 l~~~~~~a~G~~~~~~l~~~~l~~~g~~~~~~------~~~~----------------~d~~~~~~-~~~~~~~i~~ll~ 146 (715)
-......++++.. ..+...|...|+++..+ +++. -|+...+. ...+.+.|+.+|+
T Consensus 70 ~l~~~~~a~~~ln--~~lv~~L~~~Gv~a~~l~~~~~~l~~~~~~~~~~~~~~g~~~~~d~g~~g~v~~v~~~~i~~ll~ 147 (268)
T PRK14058 70 TLEVFIMAMALIN--KQLVERLQSLGVNAVGLSGLDGGLLEGKRKKAVRVVEEGKKKIIRGDYTGKIEEVNTDLLKLLLK 147 (268)
T ss_pred HHHHHHHHHHHHH--HHHHHHHHhCCCCccccCcccCCEEEEEEecccccccCCcceeccCCceeEEEEECHHHHHHHHH
Confidence 0111233444222 22234666666554322 1110 01111111 2245789999999
Q ss_pred CCCeEEEeCCCceeccCCCCCCCCcee-ecchhHHHHHHhhcCCCEEEEeccCCccccCCCCCcCccccceeeccchhhH
Q 005074 147 LRVIPIFNENDAVSTRKAPYEDSSGIF-WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAE 225 (715)
Q Consensus 147 ~g~iPVv~g~d~v~~~~~~~~~~~~~~-~~~D~~A~~lA~~L~A~~li~lTDVdGV~~~dP~~p~a~~i~~is~~e~~~~ 225 (715)
.|+|||++| .++. ..+..+ +|+|++|+.+|.+|+|++|+|+|||||||++||. ++++|++|+++|+.++
T Consensus 148 ~g~iPVi~~-~~~~-------~~g~~~~i~~D~~A~~lA~~l~A~~li~ltdv~Gv~~~~p~--~~~~i~~i~~~e~~~l 217 (268)
T PRK14058 148 AGYLPVVAP-PALS-------EEGEPLNVDGDRAAAAIAGALKAEALVLLSDVPGLLRDPPD--EGSLIERITPEEAEEL 217 (268)
T ss_pred CCCEEEEeC-ceEC-------CCCcEEecCHHHHHHHHHHHcCCCEEEEEeCChhhccCCCC--CCcCccCcCHHHHHHH
Confidence 999999997 2221 134444 9999999999999999999999999999999883 4689999999998875
Q ss_pred HhcCCCCCcccCChHHHHHHHHHHHHcCCc-EEEEeCCCcchHHHHHcCCcceeEEec
Q 005074 226 ITFGDKSRVGRGGMTAKVNAAYCAACAGIP-VVITSGFAMDSIIKVLEGKRVGTLFHR 282 (715)
Q Consensus 226 ~~~g~~~~~~~ggM~~Kl~aa~~a~~~gv~-v~I~~g~~~~~l~~~~tg~~iGT~i~~ 282 (715)
+. +++|||.+|+++|..++++|++ ++|+||+.++.+...++|. ||.+..
T Consensus 218 ~~------~~tGgM~~Kl~aa~~a~~~Gv~~v~I~~g~~~~~l~~~l~G~--GT~I~~ 267 (268)
T PRK14058 218 SK------AAGGGMKKKVLMAAEAVEGGVGRVIIADANVDDPISAALAGE--GTVIVN 267 (268)
T ss_pred hh------ccCCccHHHHHHHHHHHHcCCCEEEEEcCCCcchHHHHhCCC--ceEEec
Confidence 43 5799999999999999999995 9999999999998888875 998753
No 156
>PRK05279 N-acetylglutamate synthase; Validated
Probab=99.96 E-value=1.2e-28 Score=275.45 Aligned_cols=244 Identities=18% Similarity=0.260 Sum_probs=176.6
Q ss_pred cceEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhcccCCCccc-ccCcc---cc
Q 005074 14 VKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLAD-LQKPQ---NE 89 (715)
Q Consensus 14 ~k~~VIKiGGs~l~~~~~~~~~~~l~~l~~~I~~l~~~G~~vviVhGgg~~i~~~~l~~~~~~~~~~~~-~~~~~---~~ 89 (715)
.+++|||+||+++.+++ +.+++++|+.|+..|.++|||||||+++++.+. ..++.+.|.+ ++.++ +.
T Consensus 25 ~~~~VIk~GG~~l~~~~-------~~~~~~~i~~l~~~g~~~VlVHGgg~~i~~~~~--~~g~~~~~~~G~RvT~~~~l~ 95 (441)
T PRK05279 25 GKTFVIMLGGEAIAHGN-------FSNIVHDIALLHSLGIRLVLVHGARPQIEEQLA--ARGIEPRYHKGLRVTDAAALE 95 (441)
T ss_pred CCEEEEEECchhccChh-------HHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHH--HcCCCceecCCcccCCHHHHH
Confidence 47999999999998764 678999999999999999999999999999764 3344444543 33333 33
Q ss_pred chHHHHHHcchHHH--HHHHHHHhhcCCCCcceEEeccc--------------ccCchhH-HhHHHHHHHHHHhCCCeEE
Q 005074 90 LDGKACAAVGQSSL--MALYDTLFSQLDVTSSQLLVTDS--------------DFRDEDF-RKQLYDTVQSLLDLRVIPI 152 (715)
Q Consensus 90 l~~~~~~a~G~~~~--~~l~~~~l~~~g~~~~~~~~~~~--------------d~~~~~~-~~~~~~~i~~ll~~g~iPV 152 (715)
+..++ .|+... ..++...+.+.|++...+...++ |++..+. ...+.+.|+.+|++|+|||
T Consensus 96 ~~~~~---~g~v~~~l~~~l~~g~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~v~~v~~~~i~~ll~~g~ipV 172 (441)
T PRK05279 96 CVKQA---AGELRLDIEARLSMGLPNTPMAGAHIRVVSGNFVTARPLGVDDGVDYQHTGEVRRIDAEAIRRQLDSGAIVL 172 (441)
T ss_pred HHHHH---HHHHHHHHHHHHhccCCCCcccCCcceEeeccEEEEEECCCCCCccccceeeEEEEeHHHHHHHHHCCCeEE
Confidence 33333 343332 22223333333332221211111 2221222 1246799999999999999
Q ss_pred EeCCCceeccCCCCCCCCcee-ecchhHHHHHHhhcCCCEEEEeccCCccccCCCCCcCccccceeeccchhhHHhcCCC
Q 005074 153 FNENDAVSTRKAPYEDSSGIF-WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDK 231 (715)
Q Consensus 153 v~g~d~v~~~~~~~~~~~~~~-~~~D~~A~~lA~~L~A~~li~lTDVdGV~~~dP~~p~a~~i~~is~~e~~~~~~~g~~ 231 (715)
+.+ ++++..+..+ +|+|.+|+.||.+|+|++|+|+|||||||++ ++++|++|+.+++++++..-.
T Consensus 173 ~~~--------i~~~~~g~~~ni~~D~~a~~lA~~l~a~~lv~ltdv~GV~~~-----~~~~i~~i~~~~~~~~~~~~~- 238 (441)
T PRK05279 173 LSP--------LGYSPTGESFNLTMEEVATQVAIALKADKLIFFTESQGVLDE-----DGELIRELSPNEAQALLEALE- 238 (441)
T ss_pred ECC--------ceECCCCCEEEECHHHHHHHHHHHcCCCEEEEEECCCCccCC-----CCchhhhCCHHHHHHHHhhhh-
Confidence 964 1222244555 9999999999999999999999999999964 378999999999987765110
Q ss_pred CCcccCChHHHHHHHHHHHHcCCc-EEEEeCCCcchH-HHHHcCCcceeEEecC
Q 005074 232 SRVGRGGMTAKVNAAYCAACAGIP-VVITSGFAMDSI-IKVLEGKRVGTLFHRD 283 (715)
Q Consensus 232 ~~~~~ggM~~Kl~aa~~a~~~gv~-v~I~~g~~~~~l-~~~~tg~~iGT~i~~~ 283 (715)
+.+++|||.||+++|+.++++|++ |||+|+..++++ .++++.+..||.+..+
T Consensus 239 ~~~~~ggM~~Kv~~a~~~~~~gv~~v~i~~~~~~~~l~~~l~~~~g~GT~i~~~ 292 (441)
T PRK05279 239 DGDYNSGTARFLRAAVKACRGGVRRSHLISYAEDGALLQELFTRDGIGTMIVME 292 (441)
T ss_pred cCCCCccHHHHHHHHHHHHHcCCCEEEEecCCCCcHHHHHHhcCCCCceEEecC
Confidence 236799999999999999999996 999999999998 6677777899999876
No 157
>PRK12686 carbamate kinase; Reviewed
Probab=99.96 E-value=2.7e-28 Score=254.18 Aligned_cols=256 Identities=22% Similarity=0.306 Sum_probs=178.7
Q ss_pred ccceEEEEeCCcccccCCC--cccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhcccCCCcccccCccccc
Q 005074 13 DVKRLVVKVGTAVVTRSDG--RLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNEL 90 (715)
Q Consensus 13 ~~k~~VIKiGGs~l~~~~~--~~~~~~l~~l~~~I~~l~~~G~~vviVhGgg~~i~~~~l~~~~~~~~~~~~~~~~~~~l 90 (715)
|+|++|||+||+++.+++. +.+.++++..+++|+.|.+.|+++||+||+|||+|..+++.... .+.+ ...+.|
T Consensus 1 ~~~~iVialGGnAl~~~~~~~~~q~~~~~~~a~~ia~l~~~g~~~vi~HGnGPQVg~~~~~~~~~-~~~~----~~~~pl 75 (312)
T PRK12686 1 MKEKIVIALGGNAILQTEATAEAQQTAVREAAQHLVDLIEAGHDIVITHGNGPQVGNLLLQQAES-NSNK----VPAMPL 75 (312)
T ss_pred CCCEEEEEcChHhhCCCCCChHHHHHHHHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHhc-cccC----CCCCCh
Confidence 3579999999999997653 23456789999999999999999999999999999766533211 1111 122333
Q ss_pred hHHHHHHcchHHHH--HHHHHHhhcCCCCc------ceEEecccc--cCc------------------------------
Q 005074 91 DGKACAAVGQSSLM--ALYDTLFSQLDVTS------SQLLVTDSD--FRD------------------------------ 130 (715)
Q Consensus 91 ~~~~~~a~G~~~~~--~l~~~~l~~~g~~~------~~~~~~~~d--~~~------------------------------ 130 (715)
.--.+.+-|..+.+ ..+.+.|..++... .|+++..+| |.+
T Consensus 76 ~~~~a~sqg~iGy~~~q~l~~~l~~r~~~~~v~~vvtqv~Vd~~d~af~~ptk~ig~~~~~~~a~~~~~~~g~~~~~d~~ 155 (312)
T PRK12686 76 DTCVAMSQGMIGYWLQNALNNELTERGIDKPVITLVTQVEVDKDDPAFANPTKPIGPFYTEEEAKQQAEQPGSTFKEDAG 155 (312)
T ss_pred hhhhhhccchhhHHHHHHHHHHHHhcCCCCCceEEEEEEEECCCChhhcCCCCCccCccCHHHHHHHHHHcCCcccccCC
Confidence 33344555555542 23456665555321 133322111 111
Q ss_pred hhHHh----------HHHHHHHHHHhCCCeEEEeCCCceeccCCCCCCCCce-eecchhHHHHHHhhcCCCEEEEeccCC
Q 005074 131 EDFRK----------QLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGI-FWDNDSLAGLLALELKADLLVLLSDVE 199 (715)
Q Consensus 131 ~~~~~----------~~~~~i~~ll~~g~iPVv~g~d~v~~~~~~~~~~~~~-~~~~D~~A~~lA~~L~A~~li~lTDVd 199 (715)
+++++ .+.+.|+.||++|+|||.+|+..+....-.....+.. ++|+|.+|+.||.+|+||+|+|+||||
T Consensus 156 ~G~rrvV~sP~P~~ive~~~I~~Ll~~G~IpI~~GgggIPVv~~~~~~~gv~avid~D~~Aa~LA~~L~Ad~LIiLTDVd 235 (312)
T PRK12686 156 RGYRRVVPSPKPQEIIEHDTIRTLVDGGNIVIACGGGGIPVIRDDNTLKGVEAVIDKDFASEKLAEQIDADLLIILTGVE 235 (312)
T ss_pred CCeEEeeCCCCCccccCHHHHHHHHHCCCEEEEeCCCCCCeEecCCcEEeeecccCccHHHHHHHHHcCCCEEEEEeCch
Confidence 01111 3578999999999999988743332210000001111 489999999999999999999999999
Q ss_pred ccccCCCCCcCccccceeeccchhhHHhcCCCCCcccCChHHHHHHHHHHHHcC--CcEEEEeCCCcchHHHHHcCCcce
Q 005074 200 GLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAG--IPVVITSGFAMDSIIKVLEGKRVG 277 (715)
Q Consensus 200 GV~~~dP~~p~a~~i~~is~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a~~~g--v~v~I~~g~~~~~l~~~~tg~~iG 277 (715)
|||++ |.+|++++|++++.+|+.+++..+ .+.+|||.||+++|+.+++.+ .+++|++ ++.+.+.+.|+ .|
T Consensus 236 GVy~~-~~~p~ak~I~~I~~~e~~~li~~g---~~~tGGM~pKveAA~~av~~g~g~~viI~~---~~~i~~aL~G~-~G 307 (312)
T PRK12686 236 NVFIN-FNKPNQQKLDDITVAEAKQYIAEG---QFAPGSMLPKVEAAIDFVESGEGKKAIITS---LEQAKEALAGN-AG 307 (312)
T ss_pred hhccC-CCCCCCeECCccCHHHHHHHhhCC---CccCCCcHHHHHHHHHHHHhCCCCEEEEeC---chHHHHHhCCC-CC
Confidence 99996 557899999999999998877653 467899999999999999864 4688987 67788888887 79
Q ss_pred eEEe
Q 005074 278 TLFH 281 (715)
Q Consensus 278 T~i~ 281 (715)
|++.
T Consensus 308 T~I~ 311 (312)
T PRK12686 308 THIT 311 (312)
T ss_pred eEEe
Confidence 9874
No 158
>PRK12454 carbamate kinase-like carbamoyl phosphate synthetase; Reviewed
Probab=99.96 E-value=5.7e-28 Score=251.08 Aligned_cols=251 Identities=22% Similarity=0.340 Sum_probs=180.6
Q ss_pred cceEEEEeCCcccccCCCccc----HHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhcccCCCcccccCcccc
Q 005074 14 VKRLVVKVGTAVVTRSDGRLA----LGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNE 89 (715)
Q Consensus 14 ~k~~VIKiGGs~l~~~~~~~~----~~~l~~l~~~I~~l~~~G~~vviVhGgg~~i~~~~l~~~~~~~~~~~~~~~~~~~ 89 (715)
+|++||++||++|..++.... .++++..+++|+.+.+.|++++|+||+|||+|...++..... ......+.
T Consensus 2 ~~~ivvalgGnAl~~~~~~~~~~~q~~~v~~~a~~i~~~~~~g~~vvi~hGnGpQVG~i~~~~~~~~-----~~~~~~~p 76 (313)
T PRK12454 2 KKRIVIALGGNALLQPGEKGTAENQMKNVRKTAKQIADLIEEGYEVVITHGNGPQVGNLLLQMDAAK-----DVGIPPFP 76 (313)
T ss_pred CceEEEEeChHHhCCCCCCCcchHHHHHHHHHHHHHHHHHHcCCEEEEEECCChHHHHHHHHHHHhc-----ccCCCCCc
Confidence 479999999999987654322 348999999999999999999999999999998765432211 10111233
Q ss_pred chHHHHHHcchHHH--HHHHHHHhhcCCCCc------ceEEecccc--cCchhH--------------------------
Q 005074 90 LDGKACAAVGQSSL--MALYDTLFSQLDVTS------SQLLVTDSD--FRDEDF-------------------------- 133 (715)
Q Consensus 90 l~~~~~~a~G~~~~--~~l~~~~l~~~g~~~------~~~~~~~~d--~~~~~~-------------------------- 133 (715)
|..-.+.+.|..+. ...+.+.|..+|+.. .|+.+...| |.++..
T Consensus 77 ld~~~a~sqG~igy~l~~al~~~l~~~g~~~~v~t~~tq~~Vd~~Dpaf~~PtKpiG~~y~~~~a~~~~~~~g~~~~~d~ 156 (313)
T PRK12454 77 LDVAGAMTQGWIGYMIQQALRNELAKRGIEKQVATIVTQVIVDKNDPAFQNPTKPVGPFYDEEEAKKLAKEKGWIVKEDA 156 (313)
T ss_pred cchhhhhhhHHHHHHHHHHHHHHHHhcCCCCceEEEEEEEEECCCCccccCCCCCcCCCcCHHHHHHHHHHcCCEEEEcC
Confidence 33334444555543 234567777777653 132332221 222100
Q ss_pred ----H----------hHHHHHHHHHHhCCCeEEEeCCCceeccCCCCCCCCce-----eecchhHHHHHHhhcCCCEEEE
Q 005074 134 ----R----------KQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGI-----FWDNDSLAGLLALELKADLLVL 194 (715)
Q Consensus 134 ----~----------~~~~~~i~~ll~~g~iPVv~g~d~v~~~~~~~~~~~~~-----~~~~D~~A~~lA~~L~A~~li~ 194 (715)
+ ..+.+.|+.||++|.|||++|..++.... .++.. ++|+|.+|+.+|.+|+||+|+|
T Consensus 157 g~g~RrvV~SP~P~~ive~~aI~~LLe~G~IvI~~GgGGiPV~~----~~g~~~gveaViD~D~aAa~LA~~L~AD~LIi 232 (313)
T PRK12454 157 GRGWRRVVPSPDPLGIVEIEVIKALVENGFIVIASGGGGIPVIE----EDGELKGVEAVIDKDLASELLAEELNADIFII 232 (313)
T ss_pred CCceEEEeCCCCCccccCHHHHHHHHHCCCEEEEeCCCccceEc----CCCcEEeeeeecCccHHHHHHHHHcCCCEEEE
Confidence 0 02378999999999999999854333311 12211 3789999999999999999999
Q ss_pred eccCCccccCCCCCcCccccceeeccchhhHHhcCCCCCcccCChHHHHHHHHHHHHcCCc-EEEEeCCCcchHHHHHcC
Q 005074 195 LSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIP-VVITSGFAMDSIIKVLEG 273 (715)
Q Consensus 195 lTDVdGV~~~dP~~p~a~~i~~is~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a~~~gv~-v~I~~g~~~~~l~~~~tg 273 (715)
+|||||||++ +.+|++++|++++.+|+.+++..+ .+.+|||.||+++|+.+++.|.. ++|++ ++.+.+.+.|
T Consensus 233 LTdVdGVy~~-~~~p~~~~i~~It~~e~~~~i~~g---~~~~GgM~pKv~AA~~~v~~gg~~a~I~~---~~~i~~aL~G 305 (313)
T PRK12454 233 LTDVEKVYLN-YGKPDQKPLDKVTVEEAKKYYEEG---HFKAGSMGPKILAAIRFVENGGKRAIIAS---LEKAVEALEG 305 (313)
T ss_pred EeCCceeeCC-CCCCCCeEccccCHHHHHHHHhcC---CcCCCChHHHHHHHHHHHHcCCCeEEECc---hHHHHHHHCC
Confidence 9999999987 447899999999999998887654 36789999999999999998754 99986 6788888888
Q ss_pred CcceeEEe
Q 005074 274 KRVGTLFH 281 (715)
Q Consensus 274 ~~iGT~i~ 281 (715)
+ .||.+.
T Consensus 306 ~-~GT~I~ 312 (313)
T PRK12454 306 K-TGTRII 312 (313)
T ss_pred C-CCeEeC
Confidence 7 799874
No 159
>cd02115 AAK Amino Acid Kinases (AAK) superfamily, catalytic domain; present in such enzymes like N-acetylglutamate kinase (NAGK), carbamate kinase (CK), aspartokinase (AK), glutamate-5-kinase (G5K) and UMP kinase (UMPK). The AAK superfamily includes kinases that phosphorylate a variety of amino acid substrates. These kinases catalyze the formation of phosphoric anhydrides, generally with a carboxylate, and use ATP as the source of the phosphoryl group; are involved in amino acid biosynthesis. Some of these kinases control the process via allosteric feed-back inhibition.
Probab=99.96 E-value=4.5e-29 Score=258.38 Aligned_cols=239 Identities=28% Similarity=0.354 Sum_probs=182.2
Q ss_pred EEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhcccCCCcc-cccCccccchHHHHH
Q 005074 18 VVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLA-DLQKPQNELDGKACA 96 (715)
Q Consensus 18 VIKiGGs~l~~~~~~~~~~~l~~l~~~I~~l~~~G~~vviVhGgg~~i~~~~l~~~~~~~~~~~-~~~~~~~~l~~~~~~ 96 (715)
||||||+++++++ .+++++++|+.+++.|+++||||||++++++.+..... ...+. ...... ...+.+.
T Consensus 1 ViKiGGs~l~~~~------~~~~~~~~i~~l~~~~~~~viV~ggg~~~~~~~~~~~~--~~~~~~~~~~~~--~~~~~~~ 70 (248)
T cd02115 1 VIKFGGSSVSSEE------RLRNLARILVKLASEGGRVVVVHGAGPQITDELLAHGE--LLGYARGLRITD--RETDALA 70 (248)
T ss_pred CEeeCccccCCHH------HHHHHHHHHHHHHhcCCCEEEEECCCCCcCHHHHHHHH--hhhhhhccCCCH--HHHHHHH
Confidence 7999999998753 58999999999998999999999999988886543221 10111 111110 1123566
Q ss_pred HcchHHHHHHHHHHhhcCCCCcceEEec-----ccccCchhH-HhHHHHHHHHHHhCCCeEEEeCCCceeccCCCCCCCC
Q 005074 97 AVGQSSLMALYDTLFSQLDVTSSQLLVT-----DSDFRDEDF-RKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSS 170 (715)
Q Consensus 97 a~G~~~~~~l~~~~l~~~g~~~~~~~~~-----~~d~~~~~~-~~~~~~~i~~ll~~g~iPVv~g~d~v~~~~~~~~~~~ 170 (715)
+.|+..+..++...|...|+++.++... ++++...+. .....+.|+.+|+.|.|||++|+...... . .+
T Consensus 71 ~~~~~~~~~~~~~~l~~~gi~a~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~l~~~~ipVv~g~~~~~~~----~-~~ 145 (248)
T cd02115 71 AMGEGMSNLLIAAALEQHGIKAVPLDLTQAGFASPNQGHVGKITKVSTDRLKSLLENGILPILSGFGGTDEK----E-TG 145 (248)
T ss_pred HHHHHHHHHHHHHHHHhCCCCeEEEchHHcCeEeCCCCCcccceeeCHHHHHHHHhCCcEEEecCeEeccCC----c-ee
Confidence 6777667778889999999887665322 223322222 22346889999999999999985433210 0 11
Q ss_pred ce-eecchhHHHHHHhhcCCCEEEEeccCCccccCCCC-CcCccccceeeccchhhHHhcCCCCCcccCChHHHHHHHHH
Q 005074 171 GI-FWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYC 248 (715)
Q Consensus 171 ~~-~~~~D~~A~~lA~~L~A~~li~lTDVdGV~~~dP~-~p~a~~i~~is~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~ 248 (715)
.. .+++|++|+.+|.+|+|++|+|+|||||||++||+ +|++++|++|+++|+.++.. .|+|..|++++..
T Consensus 146 ~~~~~~sD~~A~~lA~~l~A~~li~~tdV~Gv~~~dP~~~~~a~~i~~i~~~e~~~l~~--------~g~~~~k~~a~~~ 217 (248)
T cd02115 146 TLGRGGSDSTAALLAAALKADRLVILTDVDGVYTADPRKVPDAKLLSELTYEEAAELAY--------AGAMVLKPKAADP 217 (248)
T ss_pred eecCCCHHHHHHHHHHHcCCCEEEEEecCCeeecCCCCcCCcCeECCcCCHHHHHHHHH--------cCCCccCHHHHHH
Confidence 12 29999999999999999999999999999999995 89999999999999987654 4679999999999
Q ss_pred HHHcCCcEEEEeCCCcchHHHHHcCCcceeEE
Q 005074 249 AACAGIPVVITSGFAMDSIIKVLEGKRVGTLF 280 (715)
Q Consensus 249 a~~~gv~v~I~~g~~~~~l~~~~tg~~iGT~i 280 (715)
++++|++++|+|+..++++ ++++++..||.+
T Consensus 218 ~~~~~~~v~I~~~~~~~~l-~~~~~~~~GT~I 248 (248)
T cd02115 218 AARAGIPVRIANTENPGAL-ALFTPDGGGTLI 248 (248)
T ss_pred HHHcCCcEEEEeCCCcccc-cccCCCCCCCCC
Confidence 9999999999999999999 999988889864
No 160
>TIGR01890 N-Ac-Glu-synth amino-acid N-acetyltransferase. This model represents a clade of amino-acid N-acetyltransferases acting mainly on glutamate in the first step of the "acetylated" ornithine biosynthesis pathway. For this reason it is also called N-acetylglutamate synthase. The enzyme may also act on aspartate.
Probab=99.96 E-value=7.4e-28 Score=267.91 Aligned_cols=240 Identities=19% Similarity=0.222 Sum_probs=175.2
Q ss_pred ccceEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhcccCCCccc-c---cCccc
Q 005074 13 DVKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLAD-L---QKPQN 88 (715)
Q Consensus 13 ~~k~~VIKiGGs~l~~~~~~~~~~~l~~l~~~I~~l~~~G~~vviVhGgg~~i~~~~l~~~~~~~~~~~~-~---~~~~~ 88 (715)
.++++|||+||+++++++ +.+++++|+.|+..|.++|||||||+++++.+. ..++++.|.+ + +...+
T Consensus 16 ~~~~~ViK~GG~~~~~~~-------~~~~~~~i~~l~~~g~~~vlVHGgg~~i~~~~~--~~g~~~~~~~G~RvT~~~~l 86 (429)
T TIGR01890 16 RGKTFVVGLGGELVEGGN-------LGNIVADIALLHSLGVRLVLVHGARPQIERILA--ARGRTPHYHRGLRVTDEASL 86 (429)
T ss_pred CCCEEEEEEChhhccCcc-------HHHHHHHHHHHHHCCCcEEEEcCCCHHHHHHHH--HcCCCceeeCCcccCCHHHH
Confidence 368999999999998765 678999999999999999999999999999764 3345545543 3 33333
Q ss_pred cchHHHHHHcchHHH--HHHHHHHhhcCCCC-----cc--eEEecc-------cccCchhH-HhHHHHHHHHHHhCCCeE
Q 005074 89 ELDGKACAAVGQSSL--MALYDTLFSQLDVT-----SS--QLLVTD-------SDFRDEDF-RKQLYDTVQSLLDLRVIP 151 (715)
Q Consensus 89 ~l~~~~~~a~G~~~~--~~l~~~~l~~~g~~-----~~--~~~~~~-------~d~~~~~~-~~~~~~~i~~ll~~g~iP 151 (715)
.+..+ ..|+... ...+.....+.++. .. .++... .|++..+. ...+.+.|+.+|+.|++|
T Consensus 87 ~~~~~---~~g~vn~~l~~~l~~~~~~~~~~~~~l~~~dg~~~~a~~~~~~~~~~~g~~G~v~~v~~~~l~~ll~~g~ip 163 (429)
T TIGR01890 87 EQAQQ---AAGTLRLAIEARLSMSLSNTPMAGSRLPVVSGNFVTARPIGVIEGVDYEHTGVIRKIDTEGIRRQLDAGSIV 163 (429)
T ss_pred HHHHH---HhChHHHHHHHHHHhcCCcccccccCceEccceEEEEEECCCCcCccccccceEEEEcHHHHHHHHHCCCeE
Confidence 44332 2444332 22222222222211 10 111110 12222222 125689999999999999
Q ss_pred EEeCCCceeccCCCCCCCCcee-ecchhHHHHHHhhcCCCEEEEeccCCccccCCCCCcCccccceeeccchhhHHhcCC
Q 005074 152 IFNENDAVSTRKAPYEDSSGIF-WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGD 230 (715)
Q Consensus 152 Vv~g~d~v~~~~~~~~~~~~~~-~~~D~~A~~lA~~L~A~~li~lTDVdGV~~~dP~~p~a~~i~~is~~e~~~~~~~g~ 230 (715)
|+++ ++++..++.+ +|+|.+|++||.+|+|++|+|+|||||||+++ +++|++|+.+|+++++..
T Consensus 164 vi~p--------i~~~~~g~~~nvnaD~~A~~lA~al~a~kli~ltdv~Gv~~~~-----g~~i~~i~~~~~~~l~~~-- 228 (429)
T TIGR01890 164 LLSP--------LGHSPTGETFNLDMEDVATSVAISLKADKLIYFTLSPGISDPD-----GTLAAELSPQEVESLAER-- 228 (429)
T ss_pred EECC--------cccCCCCCEEEeCHHHHHHHHHHHcCCCEEEEEeCCCcccCCC-----CCCcccCCHHHHHHHHHh--
Confidence 9964 2334456666 99999999999999999999999999999752 789999999998887763
Q ss_pred CCCcccCC-hHHHHHHHHHHHHcCCc-EEEEeCCCcchH-HHHHcCCcceeEEecC
Q 005074 231 KSRVGRGG-MTAKVNAAYCAACAGIP-VVITSGFAMDSI-IKVLEGKRVGTLFHRD 283 (715)
Q Consensus 231 ~~~~~~gg-M~~Kl~aa~~a~~~gv~-v~I~~g~~~~~l-~~~~tg~~iGT~i~~~ 283 (715)
..+| |.+|+++|..+++.|++ |||+||..++.+ .++++.+..||.+..+
T Consensus 229 ----~~~~~~~~kl~~a~~a~~~gv~~v~i~~g~~~~~l~~el~~~~g~GT~i~~d 280 (429)
T TIGR01890 229 ----LGSETTRRLLSAAVKACRGGVHRSHIVSYAEDGSLLQELFTRDGIGTSISKE 280 (429)
T ss_pred ----ccCCCcHHHHHHHHHHHHcCCCeEEEECCCCCcHHHHHHhcCCCCcceEecc
Confidence 2355 59999999999999987 999999999998 7788999999999876
No 161
>PRK00358 pyrH uridylate kinase; Provisional
Probab=99.96 E-value=1.4e-27 Score=244.21 Aligned_cols=228 Identities=19% Similarity=0.282 Sum_probs=165.3
Q ss_pred ceEEEEeCCcccccCCC-cccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhcccCCCcccccCccccchHH
Q 005074 15 KRLVVKVGTAVVTRSDG-RLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGK 93 (715)
Q Consensus 15 k~~VIKiGGs~l~~~~~-~~~~~~l~~l~~~I~~l~~~G~~vviVhGgg~~i~~~~l~~~~~~~~~~~~~~~~~~~l~~~ 93 (715)
+++|||||||+++++.. +++.+.+++++++|+++++.|+++|||||||. +.+....... ++.. . .+.
T Consensus 1 ~~iViK~GGs~l~~~~~~~~~~~~i~~~~~~i~~~~~~g~~vvlV~gGG~-~a~~~~~~~~----~~~~---~--~~~-- 68 (231)
T PRK00358 1 KRVLLKLSGEALAGEKGFGIDPEVLDRIAEEIKEVVELGVEVAIVVGGGN-IFRGYIGAAA----GMDR---A--TAD-- 68 (231)
T ss_pred CeEEEEeccceecCCCCCCCCHHHHHHHHHHHHHHHHCCCeEEEEECCCH-HHHHHHHhhc----CCCh---h--hHH--
Confidence 47999999999986542 57888999999999999999999999999754 4443321101 1111 0 011
Q ss_pred HHHHcchHHHHHHHHHHhhcCCCCcceEEecccccCchhHHhHHHHHHHHHHhCCCeEEEeCCCceeccCCCCCCCCcee
Q 005074 94 ACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIF 173 (715)
Q Consensus 94 ~~~a~G~~~~~~l~~~~l~~~g~~~~~~~~~~~d~~~~~~~~~~~~~i~~ll~~g~iPVv~g~d~v~~~~~~~~~~~~~~ 173 (715)
...+++......++...|..+|+++. ++ +...+....... ..+.+.++|++|.|||++|+ .+..+
T Consensus 69 ~~~~~~~~l~~~ll~~~l~~~Gi~a~-~~-~~~~~~~~~~~~-~~~~~~~~l~~g~vPVv~g~------------~~~~~ 133 (231)
T PRK00358 69 YMGMLATVMNALALQDALERAGVDTR-VQ-SAIPMPQVAEPY-IRRRAIRHLEKGRVVIFAAG------------TGNPF 133 (231)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCeE-Ee-chhhcccccCcc-cHHHHHHHHHCCCEEEEECC------------CCCCC
Confidence 11112222222356688989998765 22 111111111111 13457799999999999751 11224
Q ss_pred ecchhHHHHHHhhcCCCEEEEeccCCccccCCCC-CcCccccceeeccchhhHHhcCCCCCcccCChHHHHHHHHHHHHc
Q 005074 174 WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACA 252 (715)
Q Consensus 174 ~~~D~~A~~lA~~L~A~~li~lTDVdGV~~~dP~-~p~a~~i~~is~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a~~~ 252 (715)
.++|++|+.+|.+|+|++|+|+|||||||+.||+ +|++++|++|+++|+.+. | ....|+.++..+.++
T Consensus 134 ~ssD~~A~~lA~~l~A~~li~~tdVdGVy~~dP~~~~~a~~i~~i~~~e~~~~---g--------~~~~d~~a~~~a~~~ 202 (231)
T PRK00358 134 FTTDTAAALRAEEIGADVLLKATNVDGVYDADPKKDPDAKKYDRLTYDEVLEK---G--------LKVMDATAISLARDN 202 (231)
T ss_pred CCchHHHHHHHHHcCCCEEEEeeCcCceEcCCCCCCCCCEEeeEecHHHHHHc---C--------CcchhHHHHHHHHHc
Confidence 7899999999999999999999999999999995 899999999999876542 2 223588899999999
Q ss_pred CCcEEEEeCCCcchHHHHHcCCcceeEE
Q 005074 253 GIPVVITSGFAMDSIIKVLEGKRVGTLF 280 (715)
Q Consensus 253 gv~v~I~~g~~~~~l~~~~tg~~iGT~i 280 (715)
|++++|+||+.++++.++++|+..||++
T Consensus 203 ~i~v~I~~g~~~~~l~~~l~g~~~GT~i 230 (231)
T PRK00358 203 KIPIIVFNMNKPGNLKRVVKGEHIGTLV 230 (231)
T ss_pred CCcEEEECCCCchHHHHHHCCCCCCEEe
Confidence 9999999999999999999999899986
No 162
>cd04249 AAK_NAGK-NC AAK_NAGK-NC: N-Acetyl-L-glutamate kinase - noncyclic (NAGK-NC) catalyzes the phosphorylation of the gamma-COOH group of N-acetyl-L-glutamate (NAG) by ATP in the second step of microbial arginine biosynthesis using the acetylated, noncyclic route of ornithine biosynthesis. There are two variants of this pathway. In one, typified by the pathway in Escherichia coli, glutamate is acetylated by acetyl-CoA and acetylornithine is deacylated hydrolytically. In this pathway, feedback inhibition by arginine occurs at the initial acetylation of glutamate and not at the phosphorylation of NAG by NAGK. Homodimeric NAGK-NC are members of the Amino Acid Kinase Superfamily (AAK).
Probab=99.95 E-value=8.6e-28 Score=248.89 Aligned_cols=236 Identities=25% Similarity=0.283 Sum_probs=165.3
Q ss_pred EEEEeCCcccccCCCcccHHHHHHHHHHHHHHHH-CCCeEEEEeCChhHhhHHHhhhhcccCCCccc-ccCccccchHHH
Q 005074 17 LVVKVGTAVVTRSDGRLALGRLGALLEQLKELNS-QGFEIILVSSGAVGVGRQRLRYRKLVNSSLAD-LQKPQNELDGKA 94 (715)
Q Consensus 17 ~VIKiGGs~l~~~~~~~~~~~l~~l~~~I~~l~~-~G~~vviVhGgg~~i~~~~l~~~~~~~~~~~~-~~~~~~~l~~~~ 94 (715)
+||||||+++++++ .+++++++|+.+++ .|.++|||||||++++... +.+ +..+.|.+ +..+........
T Consensus 1 ~ViK~GGs~l~~~~------~~~~~~~~i~~~~~~~~~~iVlVhGgg~~~~~~~-~~~-g~~~~~~~g~rvt~~~~l~~~ 72 (252)
T cd04249 1 LVIKLGGALLETEA------ALEQLFSALSEYQQQHNRQLVIVHGGGCVVDELL-KKL-NFPSEKKNGLRVTPKEQIPYI 72 (252)
T ss_pred CEEEEChHHhcChh------hHHHHHHHHHHHHHhCCCCEEEECCCCHHHHHHH-HHc-CCCCEEECCEecCCHHHHHHH
Confidence 48999999998764 47899999998864 5778999999988776643 333 33333322 222111000111
Q ss_pred HHHc-chHHHHHHHHHHhhcCCCCcceE------Eeccc----ccCchhH-HhHHHHHHHHHHhCCCeEEEeCCCceecc
Q 005074 95 CAAV-GQSSLMALYDTLFSQLDVTSSQL------LVTDS----DFRDEDF-RKQLYDTVQSLLDLRVIPIFNENDAVSTR 162 (715)
Q Consensus 95 ~~a~-G~~~~~~l~~~~l~~~g~~~~~~------~~~~~----d~~~~~~-~~~~~~~i~~ll~~g~iPVv~g~d~v~~~ 162 (715)
..++ |+.. ..+.+.+ .+.|+++..+ +++.. |+...+. ...+.+.|+.+|+.|+|||+++ .++
T Consensus 73 ~~~~~~~~n-~~lv~~l-~~~Gv~a~~l~~~~~~~~~~~~~~~~~~~~G~v~~i~~~~l~~ll~~g~ipVi~~-~g~--- 146 (252)
T cd04249 73 TGALAGTAN-KQLMAQA-IKAGLKPVGLSLADGGMTAVTQLDPELGAVGKATANDPSLLNDLLKAGFLPIISS-IGA--- 146 (252)
T ss_pred HHHHcCccc-HHHHHHH-HhCCCCceeeeccCCCEEEEEEcCCCCCcccceEEEcHHHHHHHHHCCCEEEECC-CEE---
Confidence 2222 2221 1122233 3566655433 22221 2322222 2245789999999999999986 222
Q ss_pred CCCCCCCCcee-ecchhHHHHHHhhcCCCEEEEeccCCccccCCCCCcCccccceeeccchhhHHhcCCCCCcccCChHH
Q 005074 163 KAPYEDSSGIF-WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTA 241 (715)
Q Consensus 163 ~~~~~~~~~~~-~~~D~~A~~lA~~L~A~~li~lTDVdGV~~~dP~~p~a~~i~~is~~e~~~~~~~g~~~~~~~ggM~~ 241 (715)
+..+..+ +|+|++|+.+|.+|+|+ ++|+|||||||++|| ++|++++++|+++++..+ +++|||.+
T Consensus 147 ----~~~g~~~~~~~D~~A~~lA~~l~A~-~i~ltdv~Gv~~~~~-----~~i~~i~~~e~~~~~~~g----~~~gGm~~ 212 (252)
T cd04249 147 ----DDQGQLMNVNADQAATAIAQLLNAD-LVLLSDVSGVLDADK-----QLISELNAKQAAELIEQG----VITDGMIV 212 (252)
T ss_pred ----CCCCCEeeecHHHHHHHHHHHcCCC-EEEEeCCcccCCCCC-----cCccccCHHHHHHHHhcC----CCcCCcHH
Confidence 2244444 99999999999999999 789999999999764 799999999998877643 78999999
Q ss_pred HHHHHHHHHHcCC-cEEEEeCCCcchHHHHHcCCcceeEE
Q 005074 242 KVNAAYCAACAGI-PVVITSGFAMDSIIKVLEGKRVGTLF 280 (715)
Q Consensus 242 Kl~aa~~a~~~gv-~v~I~~g~~~~~l~~~~tg~~iGT~i 280 (715)
|+++|..+++.+. +++|+||+.++.+.++++|+..||.+
T Consensus 213 kl~~a~~~~~~~~~~v~I~~g~~~~~l~~~l~g~~~GT~I 252 (252)
T cd04249 213 KVNAALDAAQSLRRGIDIASWQYPEQLTALLAGEPVGTKI 252 (252)
T ss_pred HHHHHHHHHHhCCCeEEEEeCCCccHHHHHHcCCCCCcCC
Confidence 9999999988764 59999999999999999999899864
No 163
>cd04239 AAK_UMPK-like AAK_UMPK-like: UMP kinase (UMPK)-like, the microbial/chloroplast uridine monophosphate kinase (uridylate kinase) enzyme that catalyzes UMP phosphorylation and plays a key role in pyrimidine nucleotide biosynthesis. Regulation of this process is via feed-back control and via gene repression of carbamoyl phosphate synthetase (the first enzyme of the pyrimidine biosynthesis pathway). The UMP kinases of E. coli (Ec) and Pyrococcus furiosus (Pf) are known to function as homohexamers, with GTP and UTP being allosteric effectors. Like other related enzymes (carbamate kinase, aspartokinase, and N-acetylglutamate kinase) the E. coli and most bacterial UMPKs have a conserved, N-terminal, lysine residue proposed to function in the catalysis of the phosphoryl group transfer, whereas most archaeal UMPKs appear to lack this residue and the Pyrococcus furiosus structure has an additional Mg ion bound to the ATP molecule which is proposed to function as the catalysis instead. Als
Probab=99.95 E-value=1.7e-27 Score=243.16 Aligned_cols=227 Identities=19% Similarity=0.249 Sum_probs=170.2
Q ss_pred eEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhcccCCCcccccCccccchHHHH
Q 005074 16 RLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKAC 95 (715)
Q Consensus 16 ~~VIKiGGs~l~~~~~~~~~~~l~~l~~~I~~l~~~G~~vviVhGgg~~i~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~ 95 (715)
++|||||||++++++++++.+.+.++++.|+++.+.|++++||||||..+++.....+ ... . . .+ +..
T Consensus 1 ~iViKiGGs~l~~~~~~~~~~~i~~~a~~i~~~~~~g~~vvvV~ggG~~a~~~~~~~~-~~~----~---~--~~--~~~ 68 (229)
T cd04239 1 RIVLKLSGEALAGEGGGIDPEVLKEIAREIKEVVDLGVEVAIVVGGGNIARGYIAAAR-GMP----R---A--TA--DYI 68 (229)
T ss_pred CEEEEECcceecCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCChHHhhHHHhhc-CCC----h---h--hH--HHH
Confidence 4799999999999877888899999999999999999999999998665566432111 111 0 0 01 112
Q ss_pred HHcchHHHHHHHHHHhhcCCCCcceEEecccccCchhHHhHHHHHHHHHHhCCCeEEEeCCCceeccCCCCCCCCceeec
Q 005074 96 AAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWD 175 (715)
Q Consensus 96 ~a~G~~~~~~l~~~~l~~~g~~~~~~~~~~~d~~~~~~~~~~~~~i~~ll~~g~iPVv~g~d~v~~~~~~~~~~~~~~~~ 175 (715)
...+......++...|..+|+++.++... ++...... .+.+.+..+++.|.|||++|+. +..+.+
T Consensus 69 ~~~~~~l~~~l~~~~l~~~Gi~a~~~~~~--~~~~~~~~-~~~~~l~~~l~~g~ipVi~g~~------------g~~~~~ 133 (229)
T cd04239 69 GMLATVMNALALQDALEKLGVKTRVMSAI--PMQGVAEP-YIRRRAIRHLEKGRIVIFGGGT------------GNPGFT 133 (229)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCEEEeCHH--HHhhhhcc-ccHHHHHHHHhCCCEEEEeCcc------------CCCCCC
Confidence 22222333334568888889887653211 11111011 1356799999999999999732 122478
Q ss_pred chhHHHHHHhhcCCCEEEEeccCCccccCCCC-CcCccccceeeccchhhHHhcCCCCCcccCChHHHHHHHHHHHHcCC
Q 005074 176 NDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGI 254 (715)
Q Consensus 176 ~D~~A~~lA~~L~A~~li~lTDVdGV~~~dP~-~p~a~~i~~is~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a~~~gv 254 (715)
+|++|+.+|.+|+|++|+|+|||||||++||+ +|++++|++|+++|+.++.. |..|+.++..+.++|+
T Consensus 134 sD~~A~~lA~~l~a~~li~~tdVdGvy~~dP~~~~~a~~i~~i~~~e~~~~~~-----------~~~~~~a~~~~~~~~i 202 (229)
T cd04239 134 TDTAAALRAEEIGADVLLKATNVDGVYDADPKKNPDAKKYDRISYDELLKKGL-----------KVMDATALTLCRRNKI 202 (229)
T ss_pred cHHHHHHHHHHcCCCEEEEEECCCcccCCCCCCCCCCeEEeEEcHHHHHHHhc-----------CCccHHHHHHHHHCCC
Confidence 99999999999999999999999999999995 89999999999988875421 4556778888899999
Q ss_pred cEEEEeCCCcchHHHHHcCCcceeEE
Q 005074 255 PVVITSGFAMDSIIKVLEGKRVGTLF 280 (715)
Q Consensus 255 ~v~I~~g~~~~~l~~~~tg~~iGT~i 280 (715)
+++|+|++.++++.+.+.|+..||++
T Consensus 203 ~v~I~~g~~~~~l~~~l~g~~~GT~i 228 (229)
T cd04239 203 PIIVFNGLKPGNLLRALKGEHVGTLI 228 (229)
T ss_pred eEEEECCCChhHHHHHHcCCCCCeEe
Confidence 99999999999999999998889976
No 164
>cd04236 AAK_NAGS-Urea AAK_NAGS-Urea: N-acetylglutamate (NAG) kinase-like domain of the NAG Synthase (NAGS) of the urea cycle found in animals. Ureogenic NAGS is a mitochondrial enzyme catalyzing the formation of NAG from acetylcoenzyme A and L-glutamate; NAG is an essential allosteric activator of carbamylphosphate synthase I, the first and rate limiting enzyme of the urea cycle. Ureogenic NAGS activity is dependent on the concentration of glutamate (substrate) and arginine (activator). Domain architecture of ureogenic NAGS consists of an N-terminal NAG kinase-like (ArgB) domain (this CD) and a C-terminal DUF619 domain. Members of this CD belong to the protein superfamily, the Amino Acid Kinase Family (AAKF).
Probab=99.95 E-value=6.3e-28 Score=248.38 Aligned_cols=221 Identities=14% Similarity=0.076 Sum_probs=166.3
Q ss_pred cceEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhcccCCCcccccCccccchHH
Q 005074 14 VKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGK 93 (715)
Q Consensus 14 ~k~~VIKiGGs~l~~~~~~~~~~~l~~l~~~I~~l~~~G~~vviVhGgg~~i~~~~l~~~~~~~~~~~~~~~~~~~l~~~ 93 (715)
.+.+|||+||+++.+++ .+.+++++|+.|+..|.++|||||||++++..+. . ..+.. .+|.
T Consensus 35 ~~f~VIK~GG~~~~~~~------~~~~l~~dla~L~~lGl~~VlVHGggp~i~~~l~----~--~~~~~---~~~v---- 95 (271)
T cd04236 35 PAFAVLEVDHSVFRSLE------MVQSLSFGLAFLQRMDMKLLVVMGLSAPDGTNMS----D--LELQA---ARSR---- 95 (271)
T ss_pred CCEEEEEEChhhhcCch------hHHHHHHHHHHHHHCCCeEEEEeCCChHHhhhhc----C--Ccchh---eehh----
Confidence 57799999999997654 3789999999999999999999999999998653 1 12222 1111
Q ss_pred HHHHcchHHHHHHHHHHhhcCCCCcceE-----Eec-c--cccCchhH-HhHHHHHHHHHHhCCCeEEEeCCCceeccCC
Q 005074 94 ACAAVGQSSLMALYDTLFSQLDVTSSQL-----LVT-D--SDFRDEDF-RKQLYDTVQSLLDLRVIPIFNENDAVSTRKA 164 (715)
Q Consensus 94 ~~~a~G~~~~~~l~~~~l~~~g~~~~~~-----~~~-~--~d~~~~~~-~~~~~~~i~~ll~~g~iPVv~g~d~v~~~~~ 164 (715)
....+... ...|.+.|+++.++ +++ . .|+...+. ...+.+.|+.+|++|+|||+++ +
T Consensus 96 -~~~~n~~L-----v~~L~~~G~~A~gl~g~~~~i~a~~~~d~g~vG~V~~Vd~~~I~~lL~~g~IPVisp--------l 161 (271)
T cd04236 96 -LVKDCKTL-----VEALQANSAAAHPLFSGESVLQAEEPEPGASKGPSVSVDTELLQWCLGSGHIPLVCP--------I 161 (271)
T ss_pred -HHHHHHHH-----HHHHHhCCCCeeeecCccceEEEEEcccCCccceEEEECHHHHHHHHhCCCeEEECC--------c
Confidence 11122212 23344444443332 111 1 11111222 2256899999999999999986 2
Q ss_pred CCCCCCcee-ecchhHHHHHHhhcCCCEEEEeccCCccccCCCCCcCccccceeec-cchhhHHhcCCCCCcccCCh---
Q 005074 165 PYEDSSGIF-WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIR-AKHQAEITFGDKSRVGRGGM--- 239 (715)
Q Consensus 165 ~~~~~~~~~-~~~D~~A~~lA~~L~A~~li~lTDVdGV~~~dP~~p~a~~i~~is~-~e~~~~~~~g~~~~~~~ggM--- 239 (715)
+++..|..+ +|+|.+|.++|.+|+|++|+|+||++|||+++ +++|++|+. +|++++++.+ .++|||
T Consensus 162 g~~~~G~~~NiNaD~~A~~lA~aL~A~KLIfltd~~GV~~~~-----g~lI~~l~~~~e~~~li~~g----~i~gGm~~k 232 (271)
T cd04236 162 GETSSGRSVSLDSSEVTTAIAKALQPIKVIFLNRSGGLRDQK-----HKVLPQVHLPADLPSLSDAE----WLSETEQNR 232 (271)
T ss_pred eECCCCCEEEECHHHHHHHHHHHcCCCEEEEEeCCcceECCC-----CCCccccCcHHHHHHHHhCC----EEcCCeeec
Confidence 233356666 99999999999999999999999999999752 689999996 9999999876 789999
Q ss_pred HHHHHHHHHHHHcCCcEEEEeCCCcchH-HHHHcCCcceeE
Q 005074 240 TAKVNAAYCAACAGIPVVITSGFAMDSI-IKVLEGKRVGTL 279 (715)
Q Consensus 240 ~~Kl~aa~~a~~~gv~v~I~~g~~~~~l-~~~~tg~~iGT~ 279 (715)
+||+++|+.++..|++|+|++ ++.+ .++++....||.
T Consensus 233 i~ki~~~l~~l~~g~sv~I~~---~~~ll~elft~~g~GT~ 270 (271)
T cd04236 233 IQDIATLLNALPSMSSAVITS---AETLLTELFSHKGSGTL 270 (271)
T ss_pred hHHHHHHHHhcccCCeEEEeC---hHHHHHHHhccCCCCCc
Confidence 999999999999999999998 6666 889999888885
No 165
>cd04234 AAK_AK AAK_AK: Amino Acid Kinase Superfamily (AAK), Aspartokinase (AK); this CD includes the N-terminal catalytic domain of aspartokinase (4-L-aspartate-4-phosphotransferase;). AK is the first enzyme in the biosynthetic pathway of the aspartate family of amino acids (lysine, threonine, methionine, and isoleucine) and the bacterial cell wall component, meso-diaminopimelate. It also catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP. One mechanism for the regulation of this pathway is by the production of several isoenzymes of aspartokinase with different repressors and allosteric inhibitors. Pairs of ACT domains are proposed to specifically bind amino acids leading to allosteric regulation of the enzyme. In Escherichia coli, three different aspartokinase isoenzymes are regulated specifically by lysine, methionine, and threonine. AK-HSDHI (ThrA) and AK-HSDHII (MetL) are bifunctional enzymes that consist of an N-terminal AK and a C-terminal homoserine dehyd
Probab=99.95 E-value=1.2e-27 Score=243.61 Aligned_cols=208 Identities=21% Similarity=0.291 Sum_probs=168.4
Q ss_pred eEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhcccCCCcccccCccccchHHHH
Q 005074 16 RLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKAC 95 (715)
Q Consensus 16 ~~VIKiGGs~l~~~~~~~~~~~l~~l~~~I~~l~~~G~~vviVhGgg~~i~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~ 95 (715)
++|+|||||++.+++ .+++++++|+.+ +.|+++||||||++.+++.+++.. .+
T Consensus 1 ~iViK~GGs~l~~~~------~~~~~~~~i~~l-~~g~~vvvV~Sg~~~~t~~l~~~~--------------------~~ 53 (227)
T cd04234 1 MVVQKFGGTSVASAE------RIKRVADIIKAY-EKGNRVVVVVSAMGGVTDLLIELA--------------------LL 53 (227)
T ss_pred CEEEEECccccCCHH------HHHHHHHHHHHh-hcCCCEEEEEcCCCcccHHHHHHH--------------------HH
Confidence 579999999998753 589999999999 889999999999999988765421 46
Q ss_pred HHcchHHHHHHHHHHhhcCCCCcc-----eEEeccccc-CchhHHhHHHHHHHHHHhC-CCeEEEeCCCceeccCCCCCC
Q 005074 96 AAVGQSSLMALYDTLFSQLDVTSS-----QLLVTDSDF-RDEDFRKQLYDTVQSLLDL-RVIPIFNENDAVSTRKAPYED 168 (715)
Q Consensus 96 ~a~G~~~~~~l~~~~l~~~g~~~~-----~~~~~~~d~-~~~~~~~~~~~~i~~ll~~-g~iPVv~g~d~v~~~~~~~~~ 168 (715)
.++|+.....++...|...|+++. ++.++..++ ........+.+.|+.+++. |.|||++|+-+.. .
T Consensus 54 ~s~Ge~~~~~l~~~~l~~~Gi~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~vpVv~g~i~~~-------~ 126 (227)
T cd04234 54 LSFGERLSARLLAAALRDRGIKARSLDARQAGITTDDNHGAARIIEISYERLKELLAEIGKVPVVTGFIGRN-------E 126 (227)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCeEEeCHHHCCEEcCCccchhhHHHHHHHHHHHHHhhCCCEEEecCceecC-------C
Confidence 779999888899999999998875 444554444 2233344567899999999 9999998832211 1
Q ss_pred CCce--e--ecchhHHHHHHhhcCCCEEEEeccCCccccCCCC-CcCccccceeeccchhhHHhcCCCCCcccCChHHHH
Q 005074 169 SSGI--F--WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKV 243 (715)
Q Consensus 169 ~~~~--~--~~~D~~A~~lA~~L~A~~li~lTDVdGV~~~dP~-~p~a~~i~~is~~e~~~~~~~g~~~~~~~ggM~~Kl 243 (715)
++.. + +++|++|+.+|.+|+|++|+|+|||||||+.||+ +|++++|++|+++|+.++...| .++| |+
T Consensus 127 ~g~~~~l~rg~sD~~A~~lA~~l~A~~l~~~tdV~Gvy~~dP~~~~~a~~i~~i~~~e~~~l~~~G------~~~~--~~ 198 (227)
T cd04234 127 DGEITTLGRGGSDYSAAALAAALGADEVEIWTDVDGIYTADPRIVPEARLIPEISYDEALELAYFG------AKVL--HP 198 (227)
T ss_pred CCCEEEeeCCCcHHHHHHHHHHhCCCEEEEEECCCccCCCCCCCCCCceEcCcCCHHHHHHHHhCC------cccc--CH
Confidence 2222 2 4799999999999999999999999999999995 8999999999999998876543 4555 57
Q ss_pred HHHHHHHHcCCcEEEEeCCCcc
Q 005074 244 NAAYCAACAGIPVVITSGFAMD 265 (715)
Q Consensus 244 ~aa~~a~~~gv~v~I~~g~~~~ 265 (715)
+++..+.++|++++|+|++.++
T Consensus 199 ~a~~~a~~~~i~i~i~~~~~~~ 220 (227)
T cd04234 199 RAVEPARKANIPIRVKNTFNPE 220 (227)
T ss_pred HHHHHHHHcCCeEEEEeCCCCC
Confidence 8999999999999999998875
No 166
>cd04252 AAK_NAGK-fArgBP AAK_NAGK-fArgBP: N-Acetyl-L-glutamate kinase (NAGK) of the fungal arginine-biosynthetic pathway (fArgBP). The nuclear-encoded, mitochondrial polyprotein precursor with an N-terminal NAGK (ArgB) domain (this CD), a central DUF619 domain, and a C-terminal reductase domain (ArgC, N-Acetylglutamate Phosphate Reductase, NAGPR). The precursor is cleaved in the mitochondria into two distinct enzymes (NAGK-DUF619 and NAGPR). Native molecular weights of these proteins indicate that the kinase is an octamer whereas the reductase is a dimer. This CD also includes some gamma-proteobacteria (Xanthomonas and Xylella) NAG kinases with an N-terminal NAGK (ArgB) domain (this CD) and a C-terminal DUF619 domain. The DUF619 domain is described as a putative distant homolog of the acetyltransferase, ArgA, predicted to function in NAG synthase association in fungi. Eukaryotic sequences have an N-terminal mitochondrial transit peptide. Members of this NAG kinase domain CD belong to th
Probab=99.95 E-value=1.1e-27 Score=246.72 Aligned_cols=228 Identities=19% Similarity=0.182 Sum_probs=163.3
Q ss_pred EEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhcccCCCccc-ccCc---cccchHH
Q 005074 18 VVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLAD-LQKP---QNELDGK 93 (715)
Q Consensus 18 VIKiGGs~l~~~~~~~~~~~l~~l~~~I~~l~~~G~~vviVhGgg~~i~~~~l~~~~~~~~~~~~-~~~~---~~~l~~~ 93 (715)
|||+||+.+++. +.+++++|+.|+..|.++|||||||+++.+.+. . .+++++|.+ ++.+ .+....+
T Consensus 2 ViKiGG~~~~~~--------l~~~~~di~~l~~~g~~~VlVHGgg~~i~~~~~-~-~gi~~~~~~g~RvT~~~~l~~v~~ 71 (248)
T cd04252 2 VIKVGGAIIEDD--------LDELAASLSFLQHVGLYPIVVHGAGPQLNEELE-A-AGVEPEYVDGLRVTDPETLAVARK 71 (248)
T ss_pred EEEEChhhhhcc--------HHHHHHHHHHHHHCCCcEEEEeCCCHHHHHHHH-H-cCCCcEeeCCcccCCHHHHHHHHH
Confidence 899999999863 689999999999999999999999998888653 2 355555543 2222 2222223
Q ss_pred HHHHcchHHHHHHHHHHhhcCCCCcceE----Eec----ccccCchhH-HhHHHHHHHHHHhCCCeEEEeCCCceeccCC
Q 005074 94 ACAAVGQSSLMALYDTLFSQLDVTSSQL----LVT----DSDFRDEDF-RKQLYDTVQSLLDLRVIPIFNENDAVSTRKA 164 (715)
Q Consensus 94 ~~~a~G~~~~~~l~~~~l~~~g~~~~~~----~~~----~~d~~~~~~-~~~~~~~i~~ll~~g~iPVv~g~d~v~~~~~ 164 (715)
++..+... +...|...|+++.++ +.. ..|++..+. ...+.+.|+.+|+.|+|||+++ +++
T Consensus 72 al~~vn~~-----iv~~l~~~g~~a~~l~~~~~~a~~~~~~d~g~~G~v~~i~~~~i~~~L~~g~IPVi~p-~~~----- 140 (248)
T cd04252 72 VFLEENLK-----LVEALERNGARARPITSGVFEAEYLDKDKYGLVGKITGVNKAPIEAAIRAGYLPILTS-LAE----- 140 (248)
T ss_pred HHHHHHHH-----HHHHHHhCCCCcccccCceEEEEECcCccCCccCceeeECHHHHHHHHHCCCeEEECC-ceE-----
Confidence 33222222 234444555544322 211 123332222 2356799999999999999986 322
Q ss_pred CCCCCCcee-ecchhHHHHHHhhcCCCEEEEeccCCccccCCCCCcCccccceeec-cchhhHHhcCCCCCcccCChHHH
Q 005074 165 PYEDSSGIF-WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIR-AKHQAEITFGDKSRVGRGGMTAK 242 (715)
Q Consensus 165 ~~~~~~~~~-~~~D~~A~~lA~~L~A~~li~lTDVdGV~~~dP~~p~a~~i~~is~-~e~~~~~~~g~~~~~~~ggM~~K 242 (715)
+..+..+ +|+|.+|+.+|.+|+|++|+|+|||||||+++ +++|++++. ++.++++..+ +++|||++|
T Consensus 141 --~~~g~~~nvnaD~~A~~lA~aL~a~kli~ltdv~GV~~~~-----g~~i~~i~~~~~~~~l~~~~----~vtgGM~~K 209 (248)
T cd04252 141 --TPSGQLLNVNADVAAGELARVLEPLKIVFLNETGGLLDGT-----GKKISAINLDEEYDDLMKQP----WVKYGTKLK 209 (248)
T ss_pred --CCCCCEEEECHHHHHHHHHHHcCCCeEEEEECCcccCCCC-----CCcccccCHHHHHHHHHHcC----CcCCchHHH
Confidence 2245555 99999999999999999999999999999762 689999997 4666666543 789999999
Q ss_pred HHHHHHHHHc--CCc-EEEEeCCCcchH-HHHHcCCcceeEE
Q 005074 243 VNAAYCAACA--GIP-VVITSGFAMDSI-IKVLEGKRVGTLF 280 (715)
Q Consensus 243 l~aa~~a~~~--gv~-v~I~~g~~~~~l-~~~~tg~~iGT~i 280 (715)
+++|..++++ ++. |+|++ ++.+ .++++.+..||.+
T Consensus 210 l~~~~~~~~~~~~~~~v~i~~---~~~ll~elf~~~g~GT~i 248 (248)
T cd04252 210 IKEIKELLDTLPRSSSVSITS---PDDLQKELFTHSGAGTLI 248 (248)
T ss_pred HHHHHHHHHhCCCceEEEEEC---CchHHHHHhcCCCCCccC
Confidence 9999999987 555 99998 5776 7788888889864
No 167
>cd04246 AAK_AK-DapG-like AAK_AK-DapG-like: Amino Acid Kinase Superfamily (AAK), AK-DapG-like; this CD includes the N-terminal catalytic aspartokinase (AK) domain of the diaminopimelate-sensitive aspartokinase isoenzyme AKI (DapG), a monofunctional enzymes found in Bacilli (Bacillus subtilis 168), Clostridia, and Actinobacteria bacterial species, as well as, the catalytic AK domain of the lysine-sensitive aspartokinase isoenzyme AKII of Bacillus subtilis 168, the lysine plus threonine-sensitive aspartokinase of Corynebacterium glutamicum, and related isoenzymes. In Bacillus subtilis, the regulation of the diaminopimelate-lysine biosynthetic pathway involves dual control by diaminopimelate and lysine, effected through separate diaminopimelate- and lysine-sensitive aspartokinase isoenzymes. The role of the AKI isoenzyme is most likely to provide a constant level of aspartyl-beta-phosphate for the biosynthesis of diaminopimelate for peptidoglycan synthesis and dipicolinate during sporulati
Probab=99.95 E-value=1.6e-27 Score=245.12 Aligned_cols=222 Identities=19% Similarity=0.269 Sum_probs=169.7
Q ss_pred eEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhcccCCCcccccCccccchHHHH
Q 005074 16 RLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKAC 95 (715)
Q Consensus 16 ~~VIKiGGs~l~~~~~~~~~~~l~~l~~~I~~l~~~G~~vviVhGgg~~i~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~ 95 (715)
.+||||||+++.+. +.+++++++|+.+++.|++++|||||++..+..+++..... ..+.... ..+.+
T Consensus 1 ~iViK~GGs~l~~~------~~~~~~~~~i~~l~~~g~~~viV~sg~g~~~~~ll~~~~~~-~~~~~~~------~~~~i 67 (239)
T cd04246 1 IIVQKFGGTSVADI------ERIKRVAERIKKAVKKGYQVVVVVSAMGGTTDELIGLAKEV-SPRPSPR------ELDML 67 (239)
T ss_pred CEEEEECccccCCH------HHHHHHHHHHHHHHHcCCCEEEEECCCCchHHHHHHHHHHh-ccCCCHH------HHHHH
Confidence 47999999999874 35899999999999999999999997665665555433221 1111111 12467
Q ss_pred HHcchHHHHHHHHHHhhcCCCCcceE------EecccccCchhHHhHHHHHHHHHHhCCCeEEEeCCCceeccCCCCCCC
Q 005074 96 AAVGQSSLMALYDTLFSQLDVTSSQL------LVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDS 169 (715)
Q Consensus 96 ~a~G~~~~~~l~~~~l~~~g~~~~~~------~~~~~d~~~~~~~~~~~~~i~~ll~~g~iPVv~g~d~v~~~~~~~~~~ 169 (715)
.++|+.....++...|...|+++..+ +++..++.+......+.+.+..++++|+|||++|+-+. ..+
T Consensus 68 ~~~Ge~~~~~~~~~~l~~~g~~a~~l~~~~~~l~~~~~~~~~~~~~~~~~~l~~ll~~g~ipVi~g~~~~-------~~~ 140 (239)
T cd04246 68 LSTGEQISAALLAMALNRLGIKAISLTGWQAGILTDDHHGNARIIDIDPKRILEALEEGDVVVVAGFQGV-------NED 140 (239)
T ss_pred HHHhHHHHHHHHHHHHHhCCCCeEEeccccCCEEecCCCCceeechhhHHHHHHHHhcCCEEEEcCcccc-------CCC
Confidence 78898877778899999999887544 33434443333334567899999999999999883111 112
Q ss_pred Ccee----ecchhHHHHHHhhcCCCEEEEeccCCccccCCCC-CcCccccceeeccchhhHHhcCCCCCcccCChHHHHH
Q 005074 170 SGIF----WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVN 244 (715)
Q Consensus 170 ~~~~----~~~D~~A~~lA~~L~A~~li~lTDVdGV~~~dP~-~p~a~~i~~is~~e~~~~~~~g~~~~~~~ggM~~Kl~ 244 (715)
+... +|+|++|+.+|.+|+|++|+|+|||||||++||+ +|++++|++|+++|+.++... |.+..|++
T Consensus 141 g~~~~l~~g~~D~~A~~lA~~l~A~~li~~tdV~GVy~~dP~~~~~a~~i~~l~~~e~~~l~~~--------G~~~~~~~ 212 (239)
T cd04246 141 GEITTLGRGGSDTTAVALAAALKADRCEIYTDVDGVYTADPRIVPKARKLDVISYDEMLEMASL--------GAKVLHPR 212 (239)
T ss_pred CCEEecCCCChHHHHHHHHHHcCCCEEEEEECCCCCCCCCCCCCCCCeEcccCCHHHHHHHHhC--------CCcccCHH
Confidence 2222 4899999999999999999999999999999995 799999999999999886653 45688899
Q ss_pred HHHHHHHcCCcEEEEeCCCcc
Q 005074 245 AAYCAACAGIPVVITSGFAMD 265 (715)
Q Consensus 245 aa~~a~~~gv~v~I~~g~~~~ 265 (715)
++..+.++|+|++|.|++.++
T Consensus 213 a~~~a~~~gi~i~i~~~~~~~ 233 (239)
T cd04246 213 SVELAKKYNVPLRVRSSFSEN 233 (239)
T ss_pred HHHHHHHCCCeEEEecCCCCC
Confidence 999999999999999998763
No 168
>cd04235 AAK_CK AAK_CK: Carbamate kinase (CK) catalyzes both the ATP-phosphorylation of carbamate and carbamoyl phosphate (CP) utilization with the production of ATP from ADP and CP. Both CK (this CD) and nonhomologous CP synthetase synthesize carbamoyl phosphate, an essential precursor of arginine and pyrimidine bases, in the presence of ATP, bicarbonate, and ammonia. CK is a homodimer of 33 kDa subunits and is a member of the Amino Acid Kinase Superfamily (AAK).
Probab=99.95 E-value=2.8e-27 Score=246.53 Aligned_cols=251 Identities=25% Similarity=0.352 Sum_probs=176.6
Q ss_pred eEEEEeCCcccccCCC----cccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhcccCCCcccccCccccch
Q 005074 16 RLVVKVGTAVVTRSDG----RLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELD 91 (715)
Q Consensus 16 ~~VIKiGGs~l~~~~~----~~~~~~l~~l~~~I~~l~~~G~~vviVhGgg~~i~~~~l~~~~~~~~~~~~~~~~~~~l~ 91 (715)
++|||+||+++..+++ ..+.++++..+++|+.+.+.|++++||||+|||+|...++...... . ...+.|.
T Consensus 1 rivialgGnal~~~~~~~~~~~q~~~~~~~a~~i~~l~~~g~~vvi~hGnGPqvG~i~~~~~~~~~----~--~~~~pld 74 (308)
T cd04235 1 RIVVALGGNALLRRGEPGTAEEQRENVKIAAKALADLIKNGHEVVITHGNGPQVGNLLLQNEAAAE----K--VPAYPLD 74 (308)
T ss_pred CEEEEecHHHhCCCCCCCCCCccHHHHHHHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHHhccc----c--CCCCCcc
Confidence 5899999999987553 4567889999999999999999999999999999987654322110 0 1112222
Q ss_pred HHHHHHcchHHH--HHHHHHHhhcCCCCcc------eEEecccc--cCch------------------------------
Q 005074 92 GKACAAVGQSSL--MALYDTLFSQLDVTSS------QLLVTDSD--FRDE------------------------------ 131 (715)
Q Consensus 92 ~~~~~a~G~~~~--~~l~~~~l~~~g~~~~------~~~~~~~d--~~~~------------------------------ 131 (715)
.-.+...|+.+. ...+.+.|...|++.. +..+...| |.++
T Consensus 75 ~~~a~~~G~ig~~~~~al~~~l~~~~~~~~v~t~~t~~~V~~~dpaf~~ptKpiG~~y~~~~a~~~~~~~g~~~~~d~~~ 154 (308)
T cd04235 75 VCGAMSQGMIGYMLQQALDNELPKRGIDKPVVTLVTQVVVDANDPAFKNPTKPIGPFYSEEEAEELAAEKGWTFKEDAGR 154 (308)
T ss_pred hhcchhhHHHHHHHHHHHHHHHHHcCCCCceEEEEeEEEEcCCCccccCCCCCcCCCcCHHHHHHHHHHcCCEEEEeCCC
Confidence 223334444432 3355677777775431 22222111 1110
Q ss_pred hHHh----------HHHHHHHHHHhCCCeEEEeCCCceeccCCCCCCCCc-eeecchhHHHHHHhhcCCCEEEEeccCCc
Q 005074 132 DFRK----------QLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSG-IFWDNDSLAGLLALELKADLLVLLSDVEG 200 (715)
Q Consensus 132 ~~~~----------~~~~~i~~ll~~g~iPVv~g~d~v~~~~~~~~~~~~-~~~~~D~~A~~lA~~L~A~~li~lTDVdG 200 (715)
++++ .+.+.|+.||++|+|||++|+..+....-..+..+. .++|+|++|+.+|.+|+||+|+++|||||
T Consensus 155 g~rrvV~SP~P~~iv~~~~I~~Ll~~g~IpI~~GggGiPv~~~~~~~~gveaVid~D~~AallA~~l~Ad~LiilTdVdG 234 (308)
T cd04235 155 GYRRVVPSPKPKDIVEIEAIKTLVDNGVIVIAAGGGGIPVVREGGGLKGVEAVIDKDLASALLAEEINADLLVILTDVDN 234 (308)
T ss_pred CceeeeCCCCCccccCHHHHHHHHHCCCEEEEECCCccCEEEcCCceeeeeeccCccHHHHHHHHHcCCCEEEEEecCCe
Confidence 0110 235789999999999999985333321100000111 14899999999999999999999999999
Q ss_pred cccCCCCCcCccccceeeccchhhHHhcCCCCCcccCChHHHHHHHHHHHHcC-CcEEEEeCCCcchHHHHHcCCcceeE
Q 005074 201 LYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAG-IPVVITSGFAMDSIIKVLEGKRVGTL 279 (715)
Q Consensus 201 V~~~dP~~p~a~~i~~is~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a~~~g-v~v~I~~g~~~~~l~~~~tg~~iGT~ 279 (715)
||++++ +|++++|++++++|+.+++..+ .+.+|||.+|+++|+.+++.| .+++|++ ++.+.+.+.|+ .||.
T Consensus 235 Vy~~~~-~pda~~i~~Is~~e~~~l~~~g---~~~tGGM~pKv~aA~~~a~~gg~~v~I~~---~~~i~~aL~G~-~GT~ 306 (308)
T cd04235 235 VYINFG-KPNQKALEQVTVEELEKYIEEG---QFAPGSMGPKVEAAIRFVESGGKKAIITS---LENAEAALEGK-AGTV 306 (308)
T ss_pred EECCCC-CCCCeEcCCcCHHHHHHHHhcC---ccccCCcHHHHHHHHHHHHhCCCeEEECC---HHHHHHHHCCC-CCeE
Confidence 999754 6899999999999998877643 477999999999999999876 4599987 67888888887 6887
Q ss_pred E
Q 005074 280 F 280 (715)
Q Consensus 280 i 280 (715)
+
T Consensus 307 I 307 (308)
T cd04235 307 I 307 (308)
T ss_pred E
Confidence 6
No 169
>cd04238 AAK_NAGK-like AAK_NAGK-like: N-Acetyl-L-glutamate kinase (NAGK)-like . Included in this CD are the Escherichia coli and Pseudomonas aeruginosa type NAGKs which catalyze the phosphorylation of N-acetyl-L-glutamate (NAG) by ATP in the second step of arginine biosynthesis found in bacteria and photosynthetic organisms using either the acetylated, noncyclic (NC), or non-acetylated, cyclic (C) route of ornithine biosynthesis. Also included in this CD is a distinct group of uncharacterized (UC) bacterial and archeal NAGKs. Members of this CD belong to the Amino Acid Kinase Superfamily (AAK).
Probab=99.95 E-value=1.3e-27 Score=248.34 Aligned_cols=234 Identities=24% Similarity=0.335 Sum_probs=166.9
Q ss_pred EEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhcccCCCccc-cc---CccccchH
Q 005074 17 LVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLAD-LQ---KPQNELDG 92 (715)
Q Consensus 17 ~VIKiGGs~l~~~~~~~~~~~l~~l~~~I~~l~~~G~~vviVhGgg~~i~~~~l~~~~~~~~~~~~-~~---~~~~~l~~ 92 (715)
+||||||++++++. .+.+++++|+.++..|.++|||||||++ ++.+++.+. ...++.+ +. ..++.+
T Consensus 1 ~ViKlGGs~l~~~~------~~~~~~~~i~~l~~~g~~~VlVhG~g~~-~~~~~~~~~-~~~~~~~~~r~t~~~~l~~-- 70 (256)
T cd04238 1 VVIKYGGSAMKDEE------LKEAFADDIVLLKQVGINPVIVHGGGPE-INELLKRLG-IESEFVNGLRVTDKETMEI-- 70 (256)
T ss_pred CEEEEChHHhcCcc------HHHHHHHHHHHHHHCCCCEEEECCCcHH-HHHHHHHCC-CCCEeECCeecCCHHHHHH--
Confidence 59999999999875 3688999999999999999999988765 444444432 2222221 11 111111
Q ss_pred HHHHHc-chHHHHHHHHHHhhcCCCCcceE------Eeccc-------ccCchhH-HhHHHHHHHHHHhCCCeEEEeCCC
Q 005074 93 KACAAV-GQSSLMALYDTLFSQLDVTSSQL------LVTDS-------DFRDEDF-RKQLYDTVQSLLDLRVIPIFNEND 157 (715)
Q Consensus 93 ~~~~a~-G~~~~~~l~~~~l~~~g~~~~~~------~~~~~-------d~~~~~~-~~~~~~~i~~ll~~g~iPVv~g~d 157 (715)
...++ |+.. ..+...|++.|+++..+ +++.. |+...+. ...+.+.|+.+|+.|+|||+++
T Consensus 71 -~~~a~~g~ln--~~i~~~L~~~Gv~a~~l~~~~~~~~~~~~~~~~~~~~~~~g~i~~i~~~~l~~ll~~g~ipVv~~-- 145 (256)
T cd04238 71 -VEMVLAGKVN--KELVSLLNRAGGKAVGLSGKDGGLIKAEKKEEKDIDLGFVGEVTEVNPELLETLLEAGYIPVIAP-- 145 (256)
T ss_pred -HHHHHcCchH--HHHHHHHHhCCCCCCCcccccCCEEEEEECCCCCCCcccccceEEECHHHHHHHHHCCCEEEECC--
Confidence 12223 4322 23356666667665432 22221 1211121 2245789999999999999985
Q ss_pred ceeccCCCCCCCCce-eecchhHHHHHHhhcCCCEEEEeccCCccccCCCCCcCccccceeeccchhhHHhcCCCCCccc
Q 005074 158 AVSTRKAPYEDSSGI-FWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGR 236 (715)
Q Consensus 158 ~v~~~~~~~~~~~~~-~~~~D~~A~~lA~~L~A~~li~lTDVdGV~~~dP~~p~a~~i~~is~~e~~~~~~~g~~~~~~~ 236 (715)
+.. +..+.. ++|+|++|+.+|.+|+|++|+|+|||||||++ | +++|++++++|+.+++.. .+++
T Consensus 146 -~~~-----~~~g~~~~~~~D~~A~~lA~~l~a~~li~ltdv~Gv~~~-~----~~~i~~i~~~e~~~~~~~----~~~~ 210 (256)
T cd04238 146 -IAV-----DEDGETYNVNADTAAGAIAAALKAEKLILLTDVPGVLDD-P----GSLISELTPKEAEELIED----GVIS 210 (256)
T ss_pred -cEE-----CCCCcEEEECHHHHHHHHHHHcCCCEEEEEeCCccccCC-C----CCccccCCHHHHHHHHHc----CCCC
Confidence 222 123444 49999999999999999999999999999987 2 789999999999886653 2679
Q ss_pred CChHHHHHHHHHHHHcCCc-EEEEeCCCcchHHHHHcC-CcceeEE
Q 005074 237 GGMTAKVNAAYCAACAGIP-VVITSGFAMDSIIKVLEG-KRVGTLF 280 (715)
Q Consensus 237 ggM~~Kl~aa~~a~~~gv~-v~I~~g~~~~~l~~~~tg-~~iGT~i 280 (715)
|||.+|+++|..++++|++ |+|+||+.++++...+.+ +..||.+
T Consensus 211 ggm~~Kl~~a~~~~~~g~~~v~I~~g~~~~~l~~~l~~~~~~GT~i 256 (256)
T cd04238 211 GGMIPKVEAALEALEGGVRKVHIIDGRVPHSLLLELFTDEGIGTMI 256 (256)
T ss_pred CChHHHHHHHHHHHHhCCCEEEEeCCCCCcHHHHHHhcCCCCCCCC
Confidence 9999999999999999986 999999999999777665 6678853
No 170
>cd04251 AAK_NAGK-UC AAK_NAGK-UC: N-Acetyl-L-glutamate kinase - uncharacterized (NAGK-UC). This domain is similar to Escherichia coli and Pseudomonas aeruginosa NAGKs which catalyze the phosphorylation of the gamma-COOH group of N-acetyl-L-glutamate (NAG) by ATP in the second step of microbial arginine biosynthesis. These uncharacterized domain sequences are found in some bacteria (Deinococci and Chloroflexi) and archea and belong to the Amino Acid Kinase Superfamily (AAK).
Probab=99.95 E-value=4.4e-28 Score=251.08 Aligned_cols=222 Identities=27% Similarity=0.361 Sum_probs=159.0
Q ss_pred EEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhcccCCCccc---------ccCcc
Q 005074 17 LVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLAD---------LQKPQ 87 (715)
Q Consensus 17 ~VIKiGGs~l~~~~~~~~~~~l~~l~~~I~~l~~~G~~vviVhGgg~~i~~~~l~~~~~~~~~~~~---------~~~~~ 87 (715)
+||||||+++++ +.+++++|+.+ |.++|||||||+++...+ +.+ ++++.|.+ ++..+
T Consensus 1 ~VIKlGGs~l~~---------~~~~~~~i~~l---g~~~VlVHGgg~~i~~~~-~~~-gi~~~~~~~~~G~~~Rvt~~~~ 66 (257)
T cd04251 1 IVVKIGGSVVSD---------LDKVIDDIANF---GERLIVVHGGGNYVNEYL-KRL-GVEPKFVTSPSGIRSRYTDKET 66 (257)
T ss_pred CEEEEChHHhhC---------hHHHHHHHHHc---CCCEEEECCCHHHHHHHH-HHc-CCCcEEEeCCCCCccccCCHHH
Confidence 589999999985 36789999988 889999999988777654 333 44444431 12222
Q ss_pred ccchHHHHHHcchHHHHHHHHHHhhcCCCCcceEE------eccc----------------ccCchh-HHhHHHHHHHHH
Q 005074 88 NELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLL------VTDS----------------DFRDED-FRKQLYDTVQSL 144 (715)
Q Consensus 88 ~~l~~~~~~a~G~~~~~~l~~~~l~~~g~~~~~~~------~~~~----------------d~~~~~-~~~~~~~~i~~l 144 (715)
+.. ...++++... .+...|...|+++..+. ++.. |+...+ ....+.+.|+.+
T Consensus 67 l~~---~~~a~~~ln~--~iv~~L~~~Gi~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~G~v~~v~~~~i~~l 141 (257)
T cd04251 67 LEV---FVMVMGLINK--KIVARLHSLGVKAVGLTGLDGRLLEAKRKEIVRVNERGRKMIIRGGYTGKVEKVNSDLIEAL 141 (257)
T ss_pred HHH---HHHHHHHHHH--HHHHHHHhCCCCceecccccCCEEEEEEeecccccccCcccccCCcceEEEEEEcHHHHHHH
Confidence 222 2223333222 23346666666543221 1100 110001 122457999999
Q ss_pred HhCCCeEEEeCCCceeccCCCCCCCCcee-ecchhHHHHHHhhcCCCEEEEeccCCccccCCCCCcCccccceeeccchh
Q 005074 145 LDLRVIPIFNENDAVSTRKAPYEDSSGIF-WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQ 223 (715)
Q Consensus 145 l~~g~iPVv~g~d~v~~~~~~~~~~~~~~-~~~D~~A~~lA~~L~A~~li~lTDVdGV~~~dP~~p~a~~i~~is~~e~~ 223 (715)
|++|+|||+++ . +++..+..+ +|+|++|+.+|.+|+|++|+|+|||||||++ +++|++|+++|++
T Consensus 142 l~~g~vpVi~~--~------~~~~~G~~~~i~~D~~A~~lA~~L~A~~li~~tdv~Gv~~~------~~~i~~i~~~e~~ 207 (257)
T cd04251 142 LDAGYLPVVSP--V------AYSEEGEPLNVDGDRAAAAIAAALKAERLILLTDVEGLYLD------GRVIERITVSDAE 207 (257)
T ss_pred HhCCCeEEEeC--c------EECCCCcEEecCHHHHHHHHHHHcCCCEEEEEeCChhheeC------CcccCccCHHHHH
Confidence 99999999974 1 122245555 9999999999999999999999999999974 7899999999998
Q ss_pred hHHhcCCCCCcccCChHHHHHHHHHHHHcCCc-EEEEeCCCcchHHHHHcCCcceeE
Q 005074 224 AEITFGDKSRVGRGGMTAKVNAAYCAACAGIP-VVITSGFAMDSIIKVLEGKRVGTL 279 (715)
Q Consensus 224 ~~~~~g~~~~~~~ggM~~Kl~aa~~a~~~gv~-v~I~~g~~~~~l~~~~tg~~iGT~ 279 (715)
+++. +++|||.+|+++|..++++|++ +||+||+.++++...+.|+ ||.
T Consensus 208 ~l~~------~~~ggm~~Kl~aa~~a~~~gv~~v~i~~g~~~~~l~~~l~g~--gT~ 256 (257)
T cd04251 208 SLLE------KAGGGMKRKLLAAAEAVEGGVREVVIGDARADSPISSALNGG--GTV 256 (257)
T ss_pred HHHh------hCCCchHHHHHHHHHHHHcCCCEEEEecCCCccHHHHHHcCC--CcC
Confidence 7663 5799999999999999999997 9999999999998888774 765
No 171
>PRK14558 pyrH uridylate kinase; Provisional
Probab=99.95 E-value=4.3e-27 Score=240.40 Aligned_cols=223 Identities=23% Similarity=0.340 Sum_probs=168.4
Q ss_pred ceEEEEeCCcccccCCC-cccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhcccCCCcccccCccccchHH
Q 005074 15 KRLVVKVGTAVVTRSDG-RLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGK 93 (715)
Q Consensus 15 k~~VIKiGGs~l~~~~~-~~~~~~l~~l~~~I~~l~~~G~~vviVhGgg~~i~~~~l~~~~~~~~~~~~~~~~~~~l~~~ 93 (715)
+++|||+|||++++++. +++.+.+++++++|+++++.|++++||||||. +.+..- ..+. . ..
T Consensus 1 ~riviKlGgs~lt~~~~~~~~~~~i~~la~~i~~~~~~g~~viiV~GgGs-~~~g~~--~~~~-------~-------~~ 63 (231)
T PRK14558 1 KRVLLKLSGEALSGEGEKGFDPERVNYLVNEIKSVVEYGFKIGIVIGAGN-LFRGVE--LKEL-------S-------PT 63 (231)
T ss_pred CeEEEEeeHHHccCCCCCCcCHHHHHHHHHHHHHHHHCCCeEEEEECccH-HHHHHh--ccCC-------C-------hH
Confidence 57999999999998754 68899999999999999999999999997744 533110 0111 0 01
Q ss_pred HHHHcchH--HHH-HHHHHHhhcCCCCcceE--EecccccCchhHHhHHHHHHHHHHhCCCeEEEeCCCceeccCCCCCC
Q 005074 94 ACAAVGQS--SLM-ALYDTLFSQLDVTSSQL--LVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYED 168 (715)
Q Consensus 94 ~~~a~G~~--~~~-~l~~~~l~~~g~~~~~~--~~~~~d~~~~~~~~~~~~~i~~ll~~g~iPVv~g~d~v~~~~~~~~~ 168 (715)
....+|+. .+. .++...|..+|+++..+ +....++ .....+.+..+++.|.|||++|+.
T Consensus 64 ~~d~ig~~~~~ln~~~~~~~l~~~gi~a~~~~~~~~~~~~-----~~~~~~~i~~ll~~g~vpV~~G~~----------- 127 (231)
T PRK14558 64 RADQIGMLGTVINALYLKDIFEKSGLKAVIVSQIVNLPSV-----EPINYDDIELYFRAGYIVIFAGGT----------- 127 (231)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCeEEeccccccchh-----hhhhHHHHHHHHHCCCEEEEECCC-----------
Confidence 12223332 122 24688999999885322 1222222 122357889999999999999842
Q ss_pred CCceeecchhHHHHHHhhcCCCEEEEeccCCccccCCCC-CcCccccceeeccchhhHHhcCCCCCcccCChHHHHHHHH
Q 005074 169 SSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAY 247 (715)
Q Consensus 169 ~~~~~~~~D~~A~~lA~~L~A~~li~lTDVdGV~~~dP~-~p~a~~i~~is~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~ 247 (715)
+..++++|++|+.+|.+|+|+.|+++|||||||++||+ +|++++|++|+++|+.+. + ...| +.+++.
T Consensus 128 -~~~~~~~D~~a~~lA~~l~a~~l~~~tdVdGvy~~dP~~~~~a~~i~~i~~~e~~~~---g------~~~~--d~~a~~ 195 (231)
T PRK14558 128 -SNPFFTTDTAAALRAVEMKADILIKATKVDGIYDKDPKKFPDAKKIDHLTFSEAIKM---G------LKVM--DTEAFS 195 (231)
T ss_pred -CCCCCCcHHHHHHHHHHcCCCEEEEEecCCeeEccCCCCCCCCeEcccccHHHHHHc---C------cccc--cHHHHH
Confidence 12247889999999999999999999999999999994 999999999999888652 2 1223 467888
Q ss_pred HHHHcCCcEEEEeCCCcchHHHHHcCCcceeEEec
Q 005074 248 CAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHR 282 (715)
Q Consensus 248 ~a~~~gv~v~I~~g~~~~~l~~~~tg~~iGT~i~~ 282 (715)
.|.++|++++|+|++.++++...+.|+..||++.+
T Consensus 196 ~a~~~gi~v~I~ng~~~~~l~~~l~g~~~GT~i~~ 230 (231)
T PRK14558 196 ICKKYGITILVINFFEPGNLLKALKGENVGTLVVP 230 (231)
T ss_pred HHHHCCCCEEEEeCCCCCHHHHHHCCCCCcEEeCC
Confidence 88899999999999999999999999999999854
No 172
>cd04261 AAK_AKii-LysC-BS AAK_AKii-LysC-BS: Amino Acid Kinase Superfamily (AAK), AKii; this CD includes the N-terminal catalytic aspartokinase (AK) domain of the lysine-sensitive aspartokinase isoenzyme AKII of Bacillus subtilis 168, and the lysine plus threonine-sensitive aspartokinase of Corynebacterium glutamicum, and related sequences. In B. subtilis 168, the regulation of the diaminopimelate (Dap)-lysine biosynthetic pathway involves dual control by Dap and lysine, effected through separate Dap- and lysine-sensitive aspartokinase isoenzymes. The B. subtilis 168 AKII is induced by methionine, and repressed and inhibited by lysine. Although Corynebacterium glutamicum is known to contain a single aspartokinase isoenzyme type, both the succinylase and dehydrogenase variant pathways of DAP-lysine synthesis operate simultaneously in this organism. In this organism and other various Gram-positive bacteria, the DAP-lysine pathway is feedback regulated by the concerted action of lysine and
Probab=99.95 E-value=1.6e-27 Score=244.96 Aligned_cols=222 Identities=19% Similarity=0.281 Sum_probs=169.1
Q ss_pred eEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhcccCCCcccccCccccchHHHH
Q 005074 16 RLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKAC 95 (715)
Q Consensus 16 ~~VIKiGGs~l~~~~~~~~~~~l~~l~~~I~~l~~~G~~vviVhGgg~~i~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~ 95 (715)
.+||||||+++.+. +.+.+++++|+.+++.|+++||||||++..+..+++...... ..... -..+.+
T Consensus 1 ~iViK~GGs~l~~~------~~~~~~~~~i~~l~~~g~~~vvV~sg~g~~~~~l~~~~~~~~---~~~~~----~~~~~i 67 (239)
T cd04261 1 LIVQKFGGTSVASI------ERIKRVAERIKKRKKKGNQVVVVVSAMGGTTDELIELAKEIS---PRPPA----RELDVL 67 (239)
T ss_pred CEEEEECCcccCCH------HHHHHHHHHHHHHHHcCCCEEEEECCCCchhHHHHHHHHHhc---cCCCH----HHHHHH
Confidence 47999999999864 358999999999999999999999986666665554321110 00011 112466
Q ss_pred HHcchHHHHHHHHHHhhcCCCCcceE------EecccccCchhHHhHHHHHHHHHHhCCCeEEEeCCCceeccCCCCCCC
Q 005074 96 AAVGQSSLMALYDTLFSQLDVTSSQL------LVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDS 169 (715)
Q Consensus 96 ~a~G~~~~~~l~~~~l~~~g~~~~~~------~~~~~d~~~~~~~~~~~~~i~~ll~~g~iPVv~g~d~v~~~~~~~~~~ 169 (715)
.+.|+.....++...|...|+++..+ +++.+++........+.+.|+.++++|+|||++|+-+.. .+
T Consensus 68 ~a~Ge~~~~~l~~~~l~~~g~~a~~l~~~~~~l~~~~~~~~~~i~~~~~~~l~~ll~~~~ipVi~G~~~~~-------~~ 140 (239)
T cd04261 68 LSTGEQVSIALLAMALNRLGIKAISLTGWQAGILTDGHHGKARIIDIDPDRIRELLEEGDVVIVAGFQGIN-------ED 140 (239)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCeEEechhhCCEEecCCCCcceechhhHHHHHHHHHcCCeEEEcCccccC-------CC
Confidence 78888887778889999998875432 345555533333334568999999999999998832111 12
Q ss_pred Ccee----ecchhHHHHHHhhcCCCEEEEeccCCccccCCCC-CcCccccceeeccchhhHHhcCCCCCcccCChHHHHH
Q 005074 170 SGIF----WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVN 244 (715)
Q Consensus 170 ~~~~----~~~D~~A~~lA~~L~A~~li~lTDVdGV~~~dP~-~p~a~~i~~is~~e~~~~~~~g~~~~~~~ggM~~Kl~ 244 (715)
+... +++|++|+.+|.+|+|++|+++|||||||++||+ +|++++|++|+++|+.++... |.+..|++
T Consensus 141 g~~~~l~rg~sD~~A~~lA~~l~A~~lii~tdV~GVy~~dP~~~~~a~~i~~i~~~ea~~l~~~--------G~~~~~~~ 212 (239)
T cd04261 141 GDITTLGRGGSDTSAVALAAALGADRCEIYTDVDGVYTADPRIVPKARKLDEISYDEMLEMASL--------GAKVLHPR 212 (239)
T ss_pred CCEEecCCCChHHHHHHHHHHcCCCEEEEEeCCCCCCCCCCCCCCCceEccccCHHHHHHHHhc--------cccccCHH
Confidence 3222 4999999999999999999999999999999995 799999999999999886653 45688899
Q ss_pred HHHHHHHcCCcEEEEeCCCcc
Q 005074 245 AAYCAACAGIPVVITSGFAMD 265 (715)
Q Consensus 245 aa~~a~~~gv~v~I~~g~~~~ 265 (715)
++..+.++|++++|.|++.++
T Consensus 213 a~~~~~~~~i~i~I~n~~~~~ 233 (239)
T cd04261 213 SVELAKKYGVPLRVLSSFSEE 233 (239)
T ss_pred HHHHHHHcCCeEEEecCCCCC
Confidence 999999999999999998873
No 173
>cd04260 AAK_AKi-DapG-BS AAK_AKi-DapG-BS: Amino Acid Kinase Superfamily (AAK), AKi-DapG; this CD includes the N-terminal catalytic aspartokinase (AK) domain of the diaminopimelate-sensitive aspartokinase isoenzyme AKI (DapG), a monofunctional class enzyme found in Bacilli (Bacillus subtilis 168), Clostridia, and Actinobacteria bacterial species. In Bacillus subtilis, the regulation of the diaminopimelate-lysine biosynthetic pathway involves dual control by diaminopimelate and lysine, effected through separate diaminopimelate- and lysine-sensitive aspartokinase isoenzymes. AKI activity is invariant during the exponential and stationary phases of growth and is not altered by addition of amino acids to the growth medium. The role of this isoenzyme is most likely to provide a constant level of aspartyl-beta-phosphate for the biosynthesis of diaminopimelate for peptidoglycan synthesis and dipicolinate during sporulation. The B. subtilis AKI is tetrameric consisting of two alpha and two bet
Probab=99.95 E-value=4.2e-27 Score=242.18 Aligned_cols=220 Identities=18% Similarity=0.244 Sum_probs=167.4
Q ss_pred EEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeC-----ChhHhhHHHhhhhcccCCCcccccCccccch
Q 005074 17 LVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSS-----GAVGVGRQRLRYRKLVNSSLADLQKPQNELD 91 (715)
Q Consensus 17 ~VIKiGGs~l~~~~~~~~~~~l~~l~~~I~~l~~~G~~vviVhG-----gg~~i~~~~l~~~~~~~~~~~~~~~~~~~l~ 91 (715)
+|||||||+++++. .+++++++|+.+.+.|++++|||+ |++++++.+.+..... +.+ .... .
T Consensus 2 ~ViK~GGs~l~~~~------~~~~~~~~I~~~~~~g~~~vvV~sa~g~~G~~~~~~~l~~~~~~~--~~~-~t~~----~ 68 (244)
T cd04260 2 IVQKFGGTSVSTKE------RREQVAKKVKQAVDEGYKPVVVVSAMGRKGDPYATDTLINLVYAE--NSD-ISPR----E 68 (244)
T ss_pred EEEEECchhcCCHH------HHHHHHHHHHHHHHCCCCeEEEEECCCCCCCchHHHHHHHHHHhh--cCC-CCHH----H
Confidence 79999999999864 478999999999999998888884 4445555443322111 111 1100 1
Q ss_pred HHHHHHcchHHHHHHHHHHhhcCCCCcceE------EecccccCchhHHhHHHHHHHHHHhCCCeEEEeCCCceeccCCC
Q 005074 92 GKACAAVGQSSLMALYDTLFSQLDVTSSQL------LVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAP 165 (715)
Q Consensus 92 ~~~~~a~G~~~~~~l~~~~l~~~g~~~~~~------~~~~~d~~~~~~~~~~~~~i~~ll~~g~iPVv~g~d~v~~~~~~ 165 (715)
.+.+.++|+..++.++...|+..|+++.++ +++.+++.+......+.+.++.+++.|+|||++|+-+. .
T Consensus 69 ~~~~~~~Ge~~~~~~~~~~l~~~Gi~a~~l~~~~~~lit~~~~~~~~v~~~~~~~l~~ll~~g~VPVv~g~~~~-~---- 143 (244)
T cd04260 69 LDLLMSCGEIISAVVLTSTLRAQGLKAVALTGAQAGILTDDNYSNAKIIKVNPKKILSALKEGDVVVVAGFQGV-T---- 143 (244)
T ss_pred HHHHHHHhHHHHHHHHHHHHHhCCCCeEEechHHcCEEecCCCCceeeeccCHHHHHHHHhCCCEEEecCCccc-C----
Confidence 246678999998888999999999998876 45666554333333356789999999999999883111 1
Q ss_pred CCCCCcee----ecchhHHHHHHhhcCCCEEEEeccCCccccCCCC-CcCccccceeeccchhhHHhcCCCCCcccCChH
Q 005074 166 YEDSSGIF----WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMT 240 (715)
Q Consensus 166 ~~~~~~~~----~~~D~~A~~lA~~L~A~~li~lTDVdGV~~~dP~-~p~a~~i~~is~~e~~~~~~~g~~~~~~~ggM~ 240 (715)
.++... +++|++|+.+|.+|+|++|+|+|||||||+.||+ +|++++|++|+++|+.+++..|++ .
T Consensus 144 --~~g~~~~l~rg~sD~~A~~lA~~l~A~~l~~~tDV~GVy~~dP~~~~~a~~i~~i~~~e~~~l~~~g~~--------v 213 (244)
T cd04260 144 --EDGEVTTLGRGGSDTTAAALGAALNAEYVEIYTDVDGIMTADPRVVPNARILDVVSYNEVFQMAHQGAK--------V 213 (244)
T ss_pred --CCCCEEEeCCCchHHHHHHHHHHcCCCEEEEEECCCcCCcCCCCCCCCCeEcccCCHHHHHHHHHcCch--------h
Confidence 123322 4799999999999999999999999999999995 789999999999999988776532 4
Q ss_pred HHHHHHHHHHHcCCcEEEEeCCCc
Q 005074 241 AKVNAAYCAACAGIPVVITSGFAM 264 (715)
Q Consensus 241 ~Kl~aa~~a~~~gv~v~I~~g~~~ 264 (715)
.|.+|+..+.+++++++|.|++.+
T Consensus 214 ~~~~a~~~~~~~~i~v~I~~~~~~ 237 (244)
T cd04260 214 IHPRAVEIAMQANIPIRIRSTMSE 237 (244)
T ss_pred cCHHHHHHHHHcCCeEEEecCCCC
Confidence 677899999999999999998865
No 174
>TIGR00761 argB acetylglutamate kinase. This model describes N-acetylglutamate kinases (ArgB) of many prokaryotes and the N-acetylglutamate kinase domains of multifunctional proteins from yeasts. This enzyme is the second step in the "acetylated" ornithine biosynthesis pathway. A related group of enzymes representing the first step of the pathway contain a homologous domain and are excluded from this model.
Probab=99.95 E-value=1.9e-27 Score=243.27 Aligned_cols=213 Identities=27% Similarity=0.344 Sum_probs=152.7
Q ss_pred eEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhcccCCCccc-ccCcc---ccch
Q 005074 16 RLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLAD-LQKPQ---NELD 91 (715)
Q Consensus 16 ~~VIKiGGs~l~~~~~~~~~~~l~~l~~~I~~l~~~G~~vviVhGgg~~i~~~~l~~~~~~~~~~~~-~~~~~---~~l~ 91 (715)
++||||||++++++ +.+++++|+.+++.|.++|||||||+++... ++.+ +....+.+ ...++ +...
T Consensus 1 ~~ViK~GGs~l~~~--------~~~~~~~i~~l~~~g~~~VlVhggg~~~~~~-~~~~-~~~~~~~~g~r~t~~~~~~~~ 70 (231)
T TIGR00761 1 TIVIKIGGAAISDL--------LEAFASDIAFLRAVGIKPVIVHGGGPEINEL-LEAL-GIPPEFKNGLRVTDKETLEVV 70 (231)
T ss_pred CEEEEEChHHHhcc--------HHHHHHHHHHHHHcCCCEEEEcCCcHHHHHH-HHHc-CCCCEecCCCccCCHHHHHHH
Confidence 58999999999874 6899999999999999999999988766654 3332 22222221 11111 1111
Q ss_pred HHHHHHcchHHHHHHHHHHhhcCCCCcceE------Eeccc-----ccCchhH-HhHHHHHHHHHHhCCCeEEEeCCCce
Q 005074 92 GKACAAVGQSSLMALYDTLFSQLDVTSSQL------LVTDS-----DFRDEDF-RKQLYDTVQSLLDLRVIPIFNENDAV 159 (715)
Q Consensus 92 ~~~~~a~G~~~~~~l~~~~l~~~g~~~~~~------~~~~~-----d~~~~~~-~~~~~~~i~~ll~~g~iPVv~g~d~v 159 (715)
..+ ..|+.. ..+...|...|+++.++ +++.. |+...+. ...+.+.|+++|++|+|||++| .+
T Consensus 71 ~~~--~~g~~~--~~i~~~L~~~G~~a~~l~~~~~~~it~~~~~~~~~~~~g~i~~i~~~~i~~~l~~g~IPVi~~-~~- 144 (231)
T TIGR00761 71 EMV--LIGQVN--KELVALLNKHGINAIGLTGGDGQLFTARSLDKEDLGYVGEIKKVNKALLEALLKAGYIPVISS-LA- 144 (231)
T ss_pred HHH--HhcchH--HHHHHHHHhCCCCcccccCCCCCEEEEEECCCccCCcccceEEEcHHHHHHHHHCCCeEEECC-Cc-
Confidence 111 133332 23345777777776544 33322 2222222 2245789999999999999987 22
Q ss_pred eccCCCCCCCCcee-ecchhHHHHHHhhcCCCEEEEeccCCccccCCCCCcCccccceeeccchhhHHhcCCCCCcccCC
Q 005074 160 STRKAPYEDSSGIF-WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGG 238 (715)
Q Consensus 160 ~~~~~~~~~~~~~~-~~~D~~A~~lA~~L~A~~li~lTDVdGV~~~dP~~p~a~~i~~is~~e~~~~~~~g~~~~~~~gg 238 (715)
.+..+..+ +|+|++|+.||.+|+|++|+|+|||||||++|| +++|++|+++|+.+++..+ +++||
T Consensus 145 ------~~~~g~~~~l~sD~~A~~lA~~l~A~~li~ltdv~Gv~~~d~----~~~i~~i~~~e~~~l~~~~----~~tgg 210 (231)
T TIGR00761 145 ------LTAEGQALNVNADTAAGALAAALGAEKLVLLTDVPGILNGDG----QSLISEIPLEEIEQLIEQG----IITGG 210 (231)
T ss_pred ------cCCCCcEEEeCHHHHHHHHHHHcCCCEEEEEECCCCeecCCC----CeeccccCHHHHHHHHHcC----CCCCc
Confidence 12234444 999999999999999999999999999999977 4799999999998877643 68999
Q ss_pred hHHHHHHHHHHHHcCCc-EEE
Q 005074 239 MTAKVNAAYCAACAGIP-VVI 258 (715)
Q Consensus 239 M~~Kl~aa~~a~~~gv~-v~I 258 (715)
|.+|+++|..++++|++ +||
T Consensus 211 m~~Kl~~a~~a~~~gv~~v~i 231 (231)
T TIGR00761 211 MIPKVNAALEALRGGVKSVHI 231 (231)
T ss_pred hHHHHHHHHHHHHcCCCEEEC
Confidence 99999999999999998 775
No 175
>PF00696 AA_kinase: Amino acid kinase family Match to Glutamate-5-kinases, C-terminal end of the alignment Match to Aspartate kinases; InterPro: IPR001048 This entry contains proteins with various specificities and includes the aspartate, glutamate and uridylate kinase families. In prokaryotes and plants the synthesis of the essential amino acids lysine and threonine is predominantly regulated by feed-back inhibition of aspartate kinase (AK) and dihydrodipicolinate synthase (DHPS). In Escherichia coli, thrA, metLM, and lysC encode aspartokinase isozymes that show feedback inhibition by threonine, methionine, and lysine, respectively []. The lysine-sensitive isoenzyme of aspartate kinase from spinach leaves has a subunit composition of 4 large and 4 small subunits []. In plants although the control of carbon fixation and nitrogen assimilation has been studied in detail, relatively little is known about the regulation of carbon and nitrogen flow into amino acids. The metabolic regulation of expression of an Arabidopsis thaliana aspartate kinase/homoserine dehydrogenase (AK/HSD) gene, which encodes two linked key enzymes in the biosynthetic pathway of aspartate family amino acids has been studied []. The conversion of aspartate into either the storage amino acid asparagine or aspartate family amino acids may be subject to a coordinated, reciprocal metabolic control, and this biochemical branch point is a part of a larger, coordinated regulatory mechanism of nitrogen and carbon storage and utilization.; GO: 0008652 cellular amino acid biosynthetic process; PDB: 2X2W_B 2WXB_B 1B7B_C 2J4L_F 2J4K_E 2J4J_F 2OGX_B 3QUO_A 3D40_A 3D41_A ....
Probab=99.95 E-value=3e-27 Score=243.90 Aligned_cols=229 Identities=24% Similarity=0.337 Sum_probs=157.8
Q ss_pred ceEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhcccCCCccc-ccCccc---c-
Q 005074 15 KRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLAD-LQKPQN---E- 89 (715)
Q Consensus 15 k~~VIKiGGs~l~~~~~~~~~~~l~~l~~~I~~l~~~G~~vviVhGgg~~i~~~~l~~~~~~~~~~~~-~~~~~~---~- 89 (715)
|++||||||+++++++ .+ +.+++++|+.+.+.|.++|||||||++++... ..+ +..+++.. ...++. .
T Consensus 1 k~~ViK~GGs~l~~~~----~~-~~~~~~~i~~l~~~g~~vvvV~g~g~~~~~~~-~~~-~~~~~~~~~~r~~~~~~~~~ 73 (242)
T PF00696_consen 1 KTIVIKLGGSSLTDKD----EE-LRELADDIALLSQLGIKVVVVHGGGSFTDELL-EKY-GIEPKFVDGSRVTDIETGLI 73 (242)
T ss_dssp SEEEEEE-HHGHSSHS----HH-HHHHHHHHHHHHHTTSEEEEEESSHHHHHHHH-HHC-THTTSEETHHCHBHHHHHHH
T ss_pred CeEEEEECchhhCCch----HH-HHHHHHHHHHHHhCCCeEEEEECChhhcCchH-Hhc-cCCcccchhhhhhhhhhhHH
Confidence 6899999999999863 23 89999999999999999999999988666654 333 22222221 111110 0
Q ss_pred chHHHHHHcchHHHHHHHHHHhhcCCCCcceEEecccccCchhH--HhHHHHHHHHHHhCCCeEEEeCCCceeccCCCCC
Q 005074 90 LDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDF--RKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYE 167 (715)
Q Consensus 90 l~~~~~~a~G~~~~~~l~~~~l~~~g~~~~~~~~~~~d~~~~~~--~~~~~~~i~~ll~~g~iPVv~g~d~v~~~~~~~~ 167 (715)
.....+..+++......+...+...+....+....+.++..... ...+.+.|+.+|++|.|||++|+-....
T Consensus 74 ~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~ipVv~g~~~~~~------ 147 (242)
T PF00696_consen 74 ITMAAAAELNRDALLDEIVSAGERLGAHAVGLSLSDGGISAAKRDAREVDKEAIRELLEQGIIPVVSGFAGIDD------ 147 (242)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCTHHEEEHHHTGGTEEEEEEESSEEHHHHHHHHHHTTSEEEEESEEEEET------
T ss_pred HHHHHhhccccchhHHHHHHhhhhhhHHHHhhhhhcccchhhhhhhhhhHHHHHHHHHHCCCEEEEeCCcccCC------
Confidence 01122233333222223344455555433322222211111111 1235689999999999999998322222
Q ss_pred CCCce---e-ecchhHHHHHHhhcCCCEEEEeccCCccccCCCC-CcCccccceeeccchhhHHhcCCCCCcccCChHHH
Q 005074 168 DSSGI---F-WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAK 242 (715)
Q Consensus 168 ~~~~~---~-~~~D~~A~~lA~~L~A~~li~lTDVdGV~~~dP~-~p~a~~i~~is~~e~~~~~~~g~~~~~~~ggM~~K 242 (715)
.+.. + +++|++|+.||.+|+|++|+|+|||||||+.||+ +|++++|++|+++|+.++... ..+++|||.+|
T Consensus 148 -~g~~~~~~~~~sD~~A~~lA~~l~A~~li~~tdV~Gv~~~dP~~~~~~~~i~~l~~~e~~~l~~~---~~~~~~gm~~k 223 (242)
T PF00696_consen 148 -DGEVTTLGNVSSDYIAALLAAALGADKLIFLTDVDGVYTADPRIVPDARLIPELSYDEAEELASK---SGDVTGGMKPK 223 (242)
T ss_dssp -TSTEEEEEEETHHHHHHHHHHHTTCSEEEEEESSSSEBSSSTTTSTTSEBESEEEHHHHHHHHHH---TTSSTTTHHHH
T ss_pred -CCCcccCCCCCHHHHHHHHHHHhCchhhhhhhhcCceeecCCCCCCCCeeeeEeeHHHHHHHHhc---CCCCCCCHHHH
Confidence 3444 3 9999999999999999999999999999999996 799999999999999987642 34889999999
Q ss_pred HHHHHHHHHc-CCcEEEEe
Q 005074 243 VNAAYCAACA-GIPVVITS 260 (715)
Q Consensus 243 l~aa~~a~~~-gv~v~I~~ 260 (715)
+++|..++++ +++|+|+|
T Consensus 224 ~~~a~~~~~~~~~~v~I~n 242 (242)
T PF00696_consen 224 HPAALEAAEEGGIPVHIIN 242 (242)
T ss_dssp HHHHHHHHHHTTSEEEEEE
T ss_pred HHHHHHHHHcCCCcEEEeC
Confidence 9999999988 55799986
No 176
>TIGR02075 pyrH_bact uridylate kinase. This protein, also called UMP kinase, converts UMP to UDP by adding a phosphate from ATP. It is the first step in pyrimidine biosynthesis. GTP is an allosteric activator. In a large fraction of all bacterial genomes, the gene tends to be located immediately downstream of elongation factor Ts and upstream of ribosome recycling factor. A related protein family, believed to be equivalent in function and found in the archaea and in spirochetes, is described by a separate model, TIGR02076.
Probab=99.95 E-value=3.9e-26 Score=233.38 Aligned_cols=228 Identities=19% Similarity=0.273 Sum_probs=166.5
Q ss_pred cceEEEEeCCcccccCCC-cccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHh-hHHHhhhhcccCCCcccccCccccch
Q 005074 14 VKRLVVKVGTAVVTRSDG-RLALGRLGALLEQLKELNSQGFEIILVSSGAVGV-GRQRLRYRKLVNSSLADLQKPQNELD 91 (715)
Q Consensus 14 ~k~~VIKiGGs~l~~~~~-~~~~~~l~~l~~~I~~l~~~G~~vviVhGgg~~i-~~~~l~~~~~~~~~~~~~~~~~~~l~ 91 (715)
++++|||||||++++... +++.+++++++++|+++...|+++|||||||..+ ++. .+.+. .. .. .+
T Consensus 1 ~~~iViKlGGs~i~~~~~~~~~~~~i~~~a~~i~~~~~~~~~vviV~G~Gs~~~~~~-a~~~~-~~----~~-----~~- 68 (233)
T TIGR02075 1 YKRVLLKLSGEALAGESGFGIDPDRLNRIANEIKELVKMGIEVGIVIGGGNIFRGVS-AKELG-ID----RV-----TA- 68 (233)
T ss_pred CCEEEEEeChhhcCCCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEECCCHHHHHHH-HHhcC-CC----Cc-----cH-
Confidence 478999999999997322 5788899999999999998899999999986433 432 22221 11 10 01
Q ss_pred HHHHHHcchHHHHHHHHHHhhcCCCCcceEEecccccCchhHHhHHHHHHHHHHhCCCeEEEeCCCceeccCCCCCCCCc
Q 005074 92 GKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSG 171 (715)
Q Consensus 92 ~~~~~a~G~~~~~~l~~~~l~~~g~~~~~~~~~~~d~~~~~~~~~~~~~i~~ll~~g~iPVv~g~d~v~~~~~~~~~~~~ 171 (715)
+.+.+.++.....++...|...|+++.. ++..++. ........+.++++|++|+|||++|+. +.
T Consensus 69 -d~~g~~~~~l~~~l~~~~L~~~Gi~a~~--l~~~~~~-~~~~~~~~~~i~~ll~~g~VpV~~g~~------------g~ 132 (233)
T TIGR02075 69 -DYMGMLATVINGLALRDALEKLGVKTRV--LSAISMP-QICESYIRRKAIKHLEKGKVVIFSGGT------------GN 132 (233)
T ss_pred -HHHHHHHHHHHHHHHHHHHHhCCCCcEE--eccccCC-CCccccCHHHHHHHHHCCCEEEEECCC------------CC
Confidence 1122223323333456888888987632 3322221 000011247888899999999997621 22
Q ss_pred eeecchhHHHHHHhhcCCCEEEEecc-CCccccCCCC-CcCccccceeeccchhhHHhcCCCCCcccCChHHHHHHHHHH
Q 005074 172 IFWDNDSLAGLLALELKADLLVLLSD-VEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCA 249 (715)
Q Consensus 172 ~~~~~D~~A~~lA~~L~A~~li~lTD-VdGV~~~dP~-~p~a~~i~~is~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a 249 (715)
.++++|++|+.+|..|+||.|+|+|| |||||++||+ +|++++|++++++|+.+. +. ...++.++..+
T Consensus 133 ~~~s~D~~a~~lA~~l~a~~li~~td~VdGvy~~dp~~~~~a~~i~~i~~~e~~~~---~~--------~~~d~~~~~~a 201 (233)
T TIGR02075 133 PFFTTDTAAALRAIEINADVILKGTNGVDGVYTADPKKNKDAKKYETITYNEALKK---NL--------KVMDLTAFALA 201 (233)
T ss_pred CCCCchHHHHHHHHHcCCCEEEEeecccCeEEcCCCCCCCCCeECcEecHHHHHhc---CH--------HHHHHHHHHHH
Confidence 35889999999999999999999999 9999999995 899999999999887531 11 13467788888
Q ss_pred HHcCCcEEEEeCCCcchHHHHHcCCcceeEE
Q 005074 250 ACAGIPVVITSGFAMDSIIKVLEGKRVGTLF 280 (715)
Q Consensus 250 ~~~gv~v~I~~g~~~~~l~~~~tg~~iGT~i 280 (715)
.++|++++|+||..++++.+.+.|+..||++
T Consensus 202 ~~~~i~v~i~~g~~~~~l~~~l~g~~~GT~i 232 (233)
T TIGR02075 202 RDNNLPIVVFNIDEPGALKKVILGKGIGTLV 232 (233)
T ss_pred HHCCCeEEEEeCCCcchHHHHHCCCCCCEEe
Confidence 8999999999999999999999999999986
No 177
>PRK08841 aspartate kinase; Validated
Probab=99.94 E-value=3.7e-26 Score=249.29 Aligned_cols=222 Identities=22% Similarity=0.286 Sum_probs=173.3
Q ss_pred ceEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhcccCCCcccccCccccchHHH
Q 005074 15 KRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKA 94 (715)
Q Consensus 15 k~~VIKiGGs~l~~~~~~~~~~~l~~l~~~I~~l~~~G~~vviVhGgg~~i~~~~l~~~~~~~~~~~~~~~~~~~l~~~~ 94 (715)
+++|+||||+++.+. +.+++++++|+.+.+.|+++|+||||++..++.+++...... .... ....+.
T Consensus 2 ~~~V~KfGGtsv~~~------~~i~~va~~I~~~~~~g~~vvvVvSa~~~~td~ll~~~~~~~----~~~~---~~~~d~ 68 (392)
T PRK08841 2 PLIVQKFGGTSVGSI------ERIQTVAEHIIKAKNDGNQVVVVVSAMAGETNRLLGLAKQVD----SVPT---ARELDV 68 (392)
T ss_pred CeEEEeECcccCCCH------HHHHHHHHHHHHHHHCCCCEEEEECCCchHHHHHHHhhhhhc----cCCC---HHHHHH
Confidence 589999999999874 368999999999999999999999999878777655332211 1100 112357
Q ss_pred HHHcchHHHHHHHHHHhhcCCCCcceE------EecccccCchhHHhHHHHHHHHHHhCCCeEEEeCCCceeccCCCCCC
Q 005074 95 CAAVGQSSLMALYDTLFSQLDVTSSQL------LVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYED 168 (715)
Q Consensus 95 ~~a~G~~~~~~l~~~~l~~~g~~~~~~------~~~~~d~~~~~~~~~~~~~i~~ll~~g~iPVv~g~d~v~~~~~~~~~ 168 (715)
+.+.|+...+.++...|+..|+++..+ +++++.+.+......+.+.|.++++.|.|||++|+.+.. .
T Consensus 69 l~s~GE~~s~~lla~~L~~~Gi~a~~l~~~~~~i~t~~~~~~~~i~~~~~~~i~~ll~~~~vpVv~Gf~g~~-------~ 141 (392)
T PRK08841 69 LLSAGEQVSMALLAMTLNKLGYAARSLTGAQANIVTDNQHNDATIKHIDTSTITELLEQDQIVIVAGFQGRN-------E 141 (392)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCeEEEehhHcCEEecCCCCCceechhhHHHHHHHHhCCCEEEEeCCcccC-------C
Confidence 788999988888999999999876432 345544433333334568999999999999998842221 1
Q ss_pred CCce--e--ecchhHHHHHHhhcCCCEEEEeccCCccccCCCC-CcCccccceeeccchhhHHhcCCCCCcccCChHHHH
Q 005074 169 SSGI--F--WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKV 243 (715)
Q Consensus 169 ~~~~--~--~~~D~~A~~lA~~L~A~~li~lTDVdGV~~~dP~-~p~a~~i~~is~~e~~~~~~~g~~~~~~~ggM~~Kl 243 (715)
++.. + +++|++|+.+|.+|+|++|+++|||||||++||+ +|++++|++|+++|+.++... |.+..++
T Consensus 142 ~g~~ttlgrggsD~tAa~lA~~L~Ad~l~i~TDVdGVyt~DP~~v~~A~~i~~is~~ea~ela~~--------Ga~vlhp 213 (392)
T PRK08841 142 NGDITTLGRGGSDTTAVALAGALNADECQIFTDVDGVYTCDPRVVKNARKLDVIDFPSMEAMARK--------GAKVLHL 213 (392)
T ss_pred CCCEEEeCCCChHHHHHHHHHHcCCCEEEEEeCCCCCCcCCCCCCCCceEcccccHHHHHHHHhc--------CccccCH
Confidence 2222 2 6999999999999999999999999999999995 999999999999999987664 4556778
Q ss_pred HHHHHHHHcCCcEEEEeCCCc
Q 005074 244 NAAYCAACAGIPVVITSGFAM 264 (715)
Q Consensus 244 ~aa~~a~~~gv~v~I~~g~~~ 264 (715)
+++..+.++|+|++|.|++.+
T Consensus 214 ~ai~~a~~~~Ipi~i~n~~~~ 234 (392)
T PRK08841 214 PSVQHAWKHSVPLRVLSSFEV 234 (392)
T ss_pred HHHHHHHHCCCeEEEEecCCC
Confidence 999999999999999998764
No 178
>cd04254 AAK_UMPK-PyrH-Ec UMP kinase (UMPK)-Ec, the microbial/chloroplast uridine monophosphate kinase (uridylate kinase) enzyme that catalyzes UMP phosphorylation and plays a key role in pyrimidine nucleotide biosynthesis; regulation of this process is via feed-back control and via gene repression of carbamoyl phosphate synthetase (the first enzyme of the pyrimidine biosynthesis pathway). The UMP kinase of E. coli (Ec) is known to function as a homohexamer, with GTP and UTP being allosteric effectors. Like other related enzymes (carbamate kinase, aspartokinase, and N-acetylglutamate kinase) the E. coli and most bacterial and chloroplast UMPKs (this CD) have a conserved, N-terminal, lysine residue proposed to function in the catalysis of the phosphoryl group transfer, whereas most archaeal UMPKs appear to lack this residue and the Pyrococcus furiosus structure has an additional Mg ion bound to the ATP molecule which is proposed to function as the catalysis instead. Members of this CD be
Probab=99.94 E-value=4.2e-26 Score=233.01 Aligned_cols=228 Identities=18% Similarity=0.263 Sum_probs=166.6
Q ss_pred ceEEEEeCCcccccCCC-cccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhcccCCCcccccCccccchHH
Q 005074 15 KRLVVKVGTAVVTRSDG-RLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGK 93 (715)
Q Consensus 15 k~~VIKiGGs~l~~~~~-~~~~~~l~~l~~~I~~l~~~G~~vviVhGgg~~i~~~~l~~~~~~~~~~~~~~~~~~~l~~~ 93 (715)
|++|||||||++++++. +++.+.+++++++|+++...|+++|||||||..+.......+.. .+. .. +
T Consensus 1 ~~iViKlGGs~itdk~~~~~~~~~i~~~a~~i~~~~~~~~~~viVhGgG~~~~~~~~~~~~~-----~~~--~~-----d 68 (231)
T cd04254 1 KRVLLKLSGEALAGENGFGIDPEVLNRIAREIKEVVDLGVEVAIVVGGGNIFRGASAAEAGM-----DRA--TA-----D 68 (231)
T ss_pred CeEEEEeCceEECCCCCCCCCHHHHHHHHHHHHHHHHCCCcEEEEECCCcccccchhhhcCC-----Cch--hh-----h
Confidence 57999999999998853 56788899999999999988999999999975441111111111 010 00 1
Q ss_pred HHHHcchHHHHHHHHHHhhcCCCCcceEEecccccCchhHHhHHHHHHHHHHhCCCeEEEeCCCceeccCCCCCCCCcee
Q 005074 94 ACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIF 173 (715)
Q Consensus 94 ~~~a~G~~~~~~l~~~~l~~~g~~~~~~~~~~~d~~~~~~~~~~~~~i~~ll~~g~iPVv~g~d~v~~~~~~~~~~~~~~ 173 (715)
.+..++......++...|...|+++..+.-. .+... ....+.+.+..+|++|+|||++|+. +...
T Consensus 69 ~~g~~~~~~n~~ll~~~L~~~Gv~a~~l~~~--~~~~~-~~~~~~~~l~~~l~~g~ipV~~g~~------------G~~~ 133 (231)
T cd04254 69 YMGMLATVINALALQDALESLGVKTRVMSAI--PMQGV-AEPYIRRRAIRHLEKGRVVIFAGGT------------GNPF 133 (231)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCeEEEcHH--Hhhhh-hcccCHHHHHHHHHCCCEEEEECCc------------CCCC
Confidence 1222333333346677888888866432111 11000 0112357899999999999998621 1224
Q ss_pred ecchhHHHHHHhhcCCCEEEEeccCCccccCCCC-CcCccccceeeccchhhHHhcCCCCCcccCChHHHHHHHHHHHHc
Q 005074 174 WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACA 252 (715)
Q Consensus 174 ~~~D~~A~~lA~~L~A~~li~lTDVdGV~~~dP~-~p~a~~i~~is~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a~~~ 252 (715)
+++|++|+.+|.+|+|++|+|+|||||||+.||+ +|++++|++++++|+.+ .++ ...++.++..+.++
T Consensus 134 ~~~D~~a~~lA~~l~a~~l~~~tdVdGvy~~dp~~~~~a~~i~~i~~~~~~~---~~~--------~~~d~~a~~~a~~~ 202 (231)
T cd04254 134 FTTDTAAALRAIEINADVILKATKVDGVYDADPKKNPNAKRYDHLTYDEVLS---KGL--------KVMDATAFTLCRDN 202 (231)
T ss_pred CCcHHHHHHHHHHcCCCEEEEEeCCCEEEecCCCCCCCcEEeeEecHHHHHh---cch--------hhhHHHHHHHHHHC
Confidence 7899999999999999999999999999999995 89999999999988753 221 13477888888889
Q ss_pred CCcEEEEeCCCcchHHHHHcCCcceeEE
Q 005074 253 GIPVVITSGFAMDSIIKVLEGKRVGTLF 280 (715)
Q Consensus 253 gv~v~I~~g~~~~~l~~~~tg~~iGT~i 280 (715)
|++++|+||+.|+++.+++.|+..||++
T Consensus 203 gi~~~I~~g~~~~~l~~~l~g~~~GT~i 230 (231)
T cd04254 203 NLPIVVFNINEPGNLLKAVKGEGVGTLI 230 (231)
T ss_pred CCeEEEEeCCCccHHHHHHCCCCCCEEe
Confidence 9999999999999999999999899986
No 179
>cd04255 AAK_UMPK-MosAB AAK_UMPK-MosAB: This CD includes the alpha and beta subunits of the Mo storage protein (MosA and MosB) which are related to uridine monophosphate kinase (UMPK) enzymes that catalyze the phosphorylation of UMP by ATP, yielding UDP, and playing a key role in pyrimidine nucleotide biosynthesis. The Mo storage protein from the nitrogen-fixing bacterium, Azotobacter vinelandii, is characterized as an alpha4-beta4 octamer containing a polynuclear molybdenum-oxide cluster which is ATP-dependent to bind Mo and pH-dependent to release Mo. These and related bacterial sequences in this CD are members of the Amino Acid Kinase Superfamily (AAK).
Probab=99.94 E-value=6.6e-26 Score=233.92 Aligned_cols=228 Identities=20% Similarity=0.241 Sum_probs=164.2
Q ss_pred ceEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhcccCCCcccccCccccchHHH
Q 005074 15 KRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKA 94 (715)
Q Consensus 15 k~~VIKiGGs~l~~~~~~~~~~~l~~l~~~I~~l~~~G~~vviVhGgg~~i~~~~l~~~~~~~~~~~~~~~~~~~l~~~~ 94 (715)
.++|||||||++++++ .+.+.+++++|+++.+ +++++||||||. ++|........ .+. ....+.+.+
T Consensus 31 ~~~ViKiGGSvitdk~----~~~i~~la~~i~~~~~-~~~vilV~GGG~-~~r~~~~~~~~--~g~-----~~~~~~~~~ 97 (262)
T cd04255 31 DLNVVKIGGQSIIDRG----AEAVLPLVEEIVALRP-EHKLLILTGGGT-RARHVYSIGLD--LGM-----PTGVLAKLG 97 (262)
T ss_pred CcEEEEeccceecCCc----HHHHHHHHHHHHHHhC-CCcEEEEECCHH-HHHHHHHHHHH--cCC-----CchHHHHHH
Confidence 4689999999999875 4679999999999887 689999999866 55643321111 011 011122446
Q ss_pred HHHcchHHHHHHHHHHhhcCCCCcceEEecccccCchhHHhHHHHHHHHHHhCCCeEEEeCCCceeccCCCCCCCCc--e
Q 005074 95 CAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSG--I 172 (715)
Q Consensus 95 ~~a~G~~~~~~l~~~~l~~~g~~~~~~~~~~~d~~~~~~~~~~~~~i~~ll~~g~iPVv~g~d~v~~~~~~~~~~~~--~ 172 (715)
+.+.++.... .+..|..+|++. ++..+ .+.+.++|+.|+|||++|++.+....+. ..++ .
T Consensus 98 ~aa~~ln~lv--~~~~l~~~g~~~----i~~~~----------~~~l~~lL~~g~vPVi~g~~~~~~~~i~--~~~g~~~ 159 (262)
T cd04255 98 ASVSEQNAEM--LATLLAKHGGSK----VGHGD----------LLQLPTFLKAGRAPVISGMPPYGLWEHP--AEEGRIP 159 (262)
T ss_pred HHHHHHHHHH--HHHHHHHcCCCc----ccccc----------HHHHHHHHHCCCeEEEeCCcCCCeeeec--CCCccCC
Confidence 6666665432 246666677643 22222 2368899999999999998654332211 1233 2
Q ss_pred eecchhHHHHHHhhcCCCEEEEeccCCccccCCCC-CcCccccceeeccchhhHHhcCCCCCcccCChHHHHHHHHHHHH
Q 005074 173 FWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAAC 251 (715)
Q Consensus 173 ~~~~D~~A~~lA~~L~A~~li~lTDVdGV~~~dP~-~p~a~~i~~is~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a~~ 251 (715)
++|+|++|+.+|.+|+|++|+++|||||||++||+ +|++++|++|+++++.+....+ ...+++|..|++++ +
T Consensus 160 ~~~~D~~Aa~lA~~l~ad~li~~TdVdGVy~~dP~~~~~a~~i~~i~~~~~~~~~~~~---~~~~~~~~~~l~aa----~ 232 (262)
T cd04255 160 PHRTDVGAFLLAEVIGARNLIFVKDEDGLYTADPKKNKKAEFIPEISAAELLKKDLDD---LVLERPVLDLLQNA----R 232 (262)
T ss_pred CCCcHHHHHHHHHHhCCCEEEEEeccCeeECCCCCCCCCCeEccEeCHHHHHHHhcCC---CCCcHHHHHHHHHh----C
Confidence 49999999999999999999999999999999995 7999999999998876543121 12467777776664 3
Q ss_pred cCCcEEEEeCCCcchHHHHHcCCcceeEE
Q 005074 252 AGIPVVITSGFAMDSIIKVLEGKRVGTLF 280 (715)
Q Consensus 252 ~gv~v~I~~g~~~~~l~~~~tg~~iGT~i 280 (715)
..++++|+||+.++.+.+++.|+..||++
T Consensus 233 ~~~~v~I~~g~~~~~L~~~l~g~~~GT~i 261 (262)
T cd04255 233 HVKEVQIVNGLVPGNLTRALRGEHVGTII 261 (262)
T ss_pred CCCcEEEEeCCCCCHHHHHHcCCCCceEe
Confidence 33689999999999999999999999986
No 180
>PRK12354 carbamate kinase; Reviewed
Probab=99.94 E-value=4.5e-26 Score=236.31 Aligned_cols=248 Identities=23% Similarity=0.270 Sum_probs=167.8
Q ss_pred ceEEEEeCCcccccCCCcc--c--HHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhcccCCCcccccCccccc
Q 005074 15 KRLVVKVGTAVVTRSDGRL--A--LGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNEL 90 (715)
Q Consensus 15 k~~VIKiGGs~l~~~~~~~--~--~~~l~~l~~~I~~l~~~G~~vviVhGgg~~i~~~~l~~~~~~~~~~~~~~~~~~~l 90 (715)
+++|||+||++|.+++.+. + .++++..++.|+.+.+ |+++||+||+|||+|...+....-. .. ..+.|
T Consensus 1 ~~iVialGGnal~~~~~~~~~~~~~~~v~~~a~~ia~~~~-~~~vvi~HGnGpqvG~~~~~~~~~~-----~~--~~~pl 72 (307)
T PRK12354 1 MRIVVALGGNALLRRGEPLTAENQRANIRIAAEQIAKIAR-EHELVIVHGNGPQVGLLALQNAAYK-----DV--TPYPL 72 (307)
T ss_pred CeEEEEeccHHhCCCCCCcCHHHHHHHHHHHHHHHHHHhC-CCeEEEEeCCccHHhHHHHHHHHhc-----CC--CCCCc
Confidence 4799999999999876533 3 4488899999999998 9999999999999996543222110 00 11222
Q ss_pred hHHHHHHcchHHHH--HHHHHHhhcCCCC--cceEEecccc--cCchh--------------------------------
Q 005074 91 DGKACAAVGQSSLM--ALYDTLFSQLDVT--SSQLLVTDSD--FRDED-------------------------------- 132 (715)
Q Consensus 91 ~~~~~~a~G~~~~~--~l~~~~l~~~g~~--~~~~~~~~~d--~~~~~-------------------------------- 132 (715)
.--.+.+.|..+.+ ..+.+.|..+.+. ..|+++..+| |.++.
T Consensus 73 ~~~~a~sqg~iGy~l~q~l~~~l~~~~v~tivtq~~Vd~~dpAf~~ptKpiG~~y~~~~a~~~~~e~g~~~~~dg~g~rr 152 (307)
T PRK12354 73 DVLGAETEGMIGYMLEQELGNLLPERPVATLLTQVEVDANDPAFANPTKPIGPVYDEAEAERLAAEKGWTIKPDGDYFRR 152 (307)
T ss_pred chhcccccchHHHHHHHHHHHHhcCCcceEEEEEEEEcCCCCccCCCCCCcCcccCHHHHHHHHHhcCCEEeecCCceEE
Confidence 22223334444432 1222344332211 1132222111 21110
Q ss_pred ------HH-hHHHHHHHHHHhCCCeEEEeCCCceeccCCCC-C-CCCc-eeecchhHHHHHHhhcCCCEEEEeccCCccc
Q 005074 133 ------FR-KQLYDTVQSLLDLRVIPIFNENDAVSTRKAPY-E-DSSG-IFWDNDSLAGLLALELKADLLVLLSDVEGLY 202 (715)
Q Consensus 133 ------~~-~~~~~~i~~ll~~g~iPVv~g~d~v~~~~~~~-~-~~~~-~~~~~D~~A~~lA~~L~A~~li~lTDVdGV~ 202 (715)
+. ..+.+.|+.||++|+|||.+|+..+.... +. . ..+. .++|+|.+|+.||.+|+||+|+|+|||||||
T Consensus 153 Vv~SP~P~~ive~~~I~~Ll~~g~ivIa~GGGGIPV~~-~~~~~~~gv~aViD~D~~Aa~LA~~l~Ad~LiiLTdVdGVy 231 (307)
T PRK12354 153 VVPSPRPKRIVEIRPIRWLLEKGHLVICAGGGGIPVVY-DADGKLHGVEAVIDKDLAAALLAEQLDADLLLILTDVDAVY 231 (307)
T ss_pred EecCCCCcceeCHHHHHHHHHCCCEEEEeCCCccCeEe-cCCCceeeeeecCCccHHHHHHHHHcCCCEEEEEeCCccee
Confidence 00 13578999999999987777655554321 10 0 0111 1489999999999999999999999999999
Q ss_pred cCCCCCcCccccceeeccchhhHHhcCCCCCcccCChHHHHHHHHHHHHcCCc-EEEEeCCCcchHHHHHcCCcceeEEe
Q 005074 203 SGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIP-VVITSGFAMDSIIKVLEGKRVGTLFH 281 (715)
Q Consensus 203 ~~dP~~p~a~~i~~is~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a~~~gv~-v~I~~g~~~~~l~~~~tg~~iGT~i~ 281 (715)
++++ +|++++|++++.+|++++ .+.+|||.||+++|+.+++.+.. ++|.+ .+.+.+.+.|+ .||++.
T Consensus 232 ~~~~-~p~~k~i~~it~~e~~~~-------~f~~GgM~pKV~AA~~~~~~gg~~viI~~---~~~l~~al~G~-~GT~I~ 299 (307)
T PRK12354 232 LDWG-KPTQRAIAQATPDELREL-------GFAAGSMGPKVEAACEFVRATGKIAGIGS---LEDIQAILAGE-AGTRIS 299 (307)
T ss_pred cCCC-CCCCeECCCCCHHHHHhh-------CCCcCChHHHHHHHHHHHHhCCCEEEECC---HHHHHHHHCCC-CceEEe
Confidence 9854 688999999999998864 26799999999999999987664 88864 66788888886 799987
Q ss_pred cC
Q 005074 282 RD 283 (715)
Q Consensus 282 ~~ 283 (715)
.+
T Consensus 300 ~~ 301 (307)
T PRK12354 300 PE 301 (307)
T ss_pred cC
Confidence 65
No 181
>PLN02825 amino-acid N-acetyltransferase
Probab=99.94 E-value=9.6e-26 Score=250.78 Aligned_cols=248 Identities=19% Similarity=0.233 Sum_probs=181.2
Q ss_pred ccceEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhcccCCCccc-ccCccccch
Q 005074 13 DVKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLAD-LQKPQNELD 91 (715)
Q Consensus 13 ~~k~~VIKiGGs~l~~~~~~~~~~~l~~l~~~I~~l~~~G~~vviVhGgg~~i~~~~l~~~~~~~~~~~~-~~~~~~~l~ 91 (715)
.+|++||||||+++.++. +.+++.+|+.|+..|.++||||||++++++.+. ..++++.|.+ ++.++....
T Consensus 16 rgktfVIk~gG~~l~~~~-------~~~l~~DialL~~lGi~~VlVHGggpqI~~~l~--~~gi~~~f~~G~RVTd~~~L 86 (515)
T PLN02825 16 RGSTFVVVISGEVVAGPH-------LDNILQDISLLHGLGIKFVLVPGTHVQIDKLLA--ERGREPKYVGAYRITDSAAL 86 (515)
T ss_pred CCCEEEEEECchhhcCch-------HHHHHHHHHHHHHCCCCEEEEcCCCHHHHHHHH--HcCCCceeeCCcccCCHHHH
Confidence 378999999999998754 789999999999999999999999999999763 3466666655 333332111
Q ss_pred HHHHHHcchHHHH--HHH-----HHHhhcCCCCc----ceEEeccc--------------ccCchhH-HhHHHHHHHHHH
Q 005074 92 GKACAAVGQSSLM--ALY-----DTLFSQLDVTS----SQLLVTDS--------------DFRDEDF-RKQLYDTVQSLL 145 (715)
Q Consensus 92 ~~~~~a~G~~~~~--~l~-----~~~l~~~g~~~----~~~~~~~~--------------d~~~~~~-~~~~~~~i~~ll 145 (715)
...+.+.|+.... +.+ -..|+..|.++ ..+...++ |++..+. ..++.+.|+.+|
T Consensus 87 ~~~~~~~G~v~~~i~a~Ls~~~~v~~l~~~G~~a~~~~~gl~~~~Gn~v~a~~~gv~dgvD~g~vG~V~~Vd~~~i~~~L 166 (515)
T PLN02825 87 QASMEAAGKIRVMIEAKLSPGPSIPNLRRHGDNSRWHEVGVSVASGNFLAAKRRGVVNGVDFGATGEVKKIDVSRIKERL 166 (515)
T ss_pred HHHHHHHHHHHHHHHHhhccccchhHHHhcCCCCccccCceEeccCcEEEEEECCCCcCccccceeeEEEEcHHHHHHHH
Confidence 1133455555432 111 12345555554 22222222 3332222 226789999999
Q ss_pred hCCCeEEEeCCCceeccCCCCCCCCcee-ecchhHHHHHHhhcCCCEEEEeccCCccccCCCCCcCccccceeeccchhh
Q 005074 146 DLRVIPIFNENDAVSTRKAPYEDSSGIF-WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQA 224 (715)
Q Consensus 146 ~~g~iPVv~g~d~v~~~~~~~~~~~~~~-~~~D~~A~~lA~~L~A~~li~lTDVdGV~~~dP~~p~a~~i~~is~~e~~~ 224 (715)
+.|.|||+++ ++++..|..| +|+|.+|+++|.+|+|+||||+|||+ +++. ++++|++|+.+|+++
T Consensus 167 ~~g~Ipvisp--------lg~s~~Ge~~NinaD~vA~avA~aL~A~KLI~ltd~~-~~~~-----~g~li~~l~~~e~~~ 232 (515)
T PLN02825 167 DSNCIVLLSN--------LGYSSSGEVLNCNTYEVATACALAIGADKLICIVDGP-ILDE-----NGRLIRFMTLEEADM 232 (515)
T ss_pred hCCCeEEECC--------ceECCCCCEEeeCHHHHHHHHHHHcCCCeEEEEeCcc-eecC-----CCCCcCcCCHHHHHH
Confidence 9999999964 4566677778 99999999999999999999999987 5544 268999999999998
Q ss_pred HHhcCCC----------------------CC-------------------------------c-----------------
Q 005074 225 EITFGDK----------------------SR-------------------------------V----------------- 234 (715)
Q Consensus 225 ~~~~g~~----------------------~~-------------------------------~----------------- 234 (715)
+++.+.. .. .
T Consensus 233 li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (515)
T PLN02825 233 LIRKRAKQSEIAANYVKAVGGEDYSYSLGLDSVNTTPFNNNGRGFWGSGSATDSFQNGVGFDNGNGLSGEQGFAIGGEER 312 (515)
T ss_pred HHHhhhhcchhhhhhhhhccccccccccccccccccccccccccccccccccccccccccccCcccccccccccccchhh
Confidence 7754200 00 0
Q ss_pred --ccCChHHHHHHHHHHHHcCCc-EEEEeCCCcchH-HHHHcCCcceeEEecC
Q 005074 235 --GRGGMTAKVNAAYCAACAGIP-VVITSGFAMDSI-IKVLEGKRVGTLFHRD 283 (715)
Q Consensus 235 --~~ggM~~Kl~aa~~a~~~gv~-v~I~~g~~~~~l-~~~~tg~~iGT~i~~~ 283 (715)
.+.+...|+.+|..|++.||+ +|++++..++.| .++||.+.+||.+..+
T Consensus 313 ~~~~~~~~~~l~~a~~a~~~gv~r~hl~~~~~~gall~elft~dg~gt~i~~~ 365 (515)
T PLN02825 313 LSRLNGYLSELAAAAFVCRGGVQRVHLLDGTIEGVLLLELFTRDGMGTMIASD 365 (515)
T ss_pred chhhhhHHHHHHHHHHHHHcCCCeEEeccCCCCchHHHHhhccCCceeEeccC
Confidence 112244579999999999999 999999999998 9999999999999776
No 182
>PRK14557 pyrH uridylate kinase; Provisional
Probab=99.94 E-value=5.5e-25 Score=225.13 Aligned_cols=235 Identities=17% Similarity=0.219 Sum_probs=168.7
Q ss_pred hcccceEEEEeCCcccccCCC-cccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHh-hHHHhhhhcccCCCcccccCccc
Q 005074 11 VKDVKRLVVKVGTAVVTRSDG-RLALGRLGALLEQLKELNSQGFEIILVSSGAVGV-GRQRLRYRKLVNSSLADLQKPQN 88 (715)
Q Consensus 11 ~~~~k~~VIKiGGs~l~~~~~-~~~~~~l~~l~~~I~~l~~~G~~vviVhGgg~~i-~~~~l~~~~~~~~~~~~~~~~~~ 88 (715)
|.+++++||||||+++.++++ .++.+++++++++|+.+.+.|++++||||||..+ |+. .+.. ++ ...
T Consensus 1 ~~~~~riViKlGG~al~~~~~~~~~~~~i~~~a~~i~~~~~~g~~vvVVvGgGn~~rg~~-a~~~-~~-------~~~-- 69 (247)
T PRK14557 1 MRPYKRVLIKLSGGALADQTGNSFNSKRLEHIANEILSIVDLGIEVSIVIGGGNIFRGHL-AEEW-GI-------DRV-- 69 (247)
T ss_pred CCcccEEEEEeCceeECCCCCCCcCHHHHHHHHHHHHHHHHcCCeEEEEECCcHHHHHHH-HHhc-CC-------ChH--
Confidence 456889999999999987654 5677889999999999999999999999997534 442 2111 11 100
Q ss_pred cchHHHHHHcchHHHHHHHHHHhhcC-CCCcceEEecccccCchhHHhHHHHHHHHHHhCCCeEEEeCCCceeccCCCCC
Q 005074 89 ELDGKACAAVGQSSLMALYDTLFSQL-DVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYE 167 (715)
Q Consensus 89 ~l~~~~~~a~G~~~~~~l~~~~l~~~-g~~~~~~~~~~~d~~~~~~~~~~~~~i~~ll~~g~iPVv~g~d~v~~~~~~~~ 167 (715)
..+.+-..|......++...|... +..+ . ++++..+..... ......+...|++|.|||+.|+.
T Consensus 70 --~~D~ig~~g~~lna~ll~~~l~~~~~~~~-~-i~t~~~~~~~~~-~~~~~~~~~~l~~g~VvV~~G~~---------- 134 (247)
T PRK14557 70 --EADNIGTLGTIINSLMLRGVLTSKTNKEV-R-VMTSIPFNAVAE-PYIRLRAVHHLDNGYIVIFGGGN---------- 134 (247)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHhhhCCce-e-EEeccccccccc-hhhHHHHHHHHhCCCEEEEECCc----------
Confidence 012333444444334555556543 3321 1 455444432211 11223466679999999998721
Q ss_pred CCCceeecchhHHHHHHhhcCCCEEEEe-ccCCccccCCC-CCcCccccceeeccchhhHHhcCCCCCcccCChHHHHHH
Q 005074 168 DSSGIFWDNDSLAGLLALELKADLLVLL-SDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNA 245 (715)
Q Consensus 168 ~~~~~~~~~D~~A~~lA~~L~A~~li~l-TDVdGV~~~dP-~~p~a~~i~~is~~e~~~~~~~g~~~~~~~ggM~~Kl~a 245 (715)
+...+++|++|+.+|.+++||.|+++ |||||||+.|| ++|+|++|++|+++|+. ..+ -.-| ..++
T Consensus 135 --g~~~~stD~lAallA~~l~Ad~li~~ttdVdGvY~~DP~~~~~Ak~i~~i~~~e~~---~~~------~~~~--~~~A 201 (247)
T PRK14557 135 --GQPFVTTDYPSVQRAIEMNSDAILVAKQGVDGVFTSDPKHNKSAKMYRKLNYNDVV---RQN------IQVM--DQAA 201 (247)
T ss_pred --CCCccChHHHHHHHHHHhCCCEEEEecCCcCEeECCCCCCCCCCEEeeEEChhhhc---ccC------HHHH--HHHH
Confidence 22347899999999999999999999 59999999999 59999999999988773 111 1124 3468
Q ss_pred HHHHHHcCCcEEEEeCCCcchHHHHHcCCcceeEEecCC
Q 005074 246 AYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRDA 284 (715)
Q Consensus 246 a~~a~~~gv~v~I~~g~~~~~l~~~~tg~~iGT~i~~~~ 284 (715)
+..|.++|++++|+||+.++.+.+++.|+..||++.+.+
T Consensus 202 ~~~a~~~gi~v~I~ng~~~~~l~~~l~g~~~GT~i~~~~ 240 (247)
T PRK14557 202 LLLARDYNLPAHVFNFDEPGVMRRICLGEHVGTLINDDA 240 (247)
T ss_pred HHHHHHCCCcEEEEeCCCChHHHHHHcCCCCcEEEecCc
Confidence 888999999999999999999999999999999998773
No 183
>PRK04531 acetylglutamate kinase; Provisional
Probab=99.93 E-value=3e-25 Score=241.22 Aligned_cols=211 Identities=22% Similarity=0.193 Sum_probs=158.0
Q ss_pred cceEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhcccCCCccc-ccCccccchH
Q 005074 14 VKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLAD-LQKPQNELDG 92 (715)
Q Consensus 14 ~k~~VIKiGGs~l~~~~~~~~~~~l~~l~~~I~~l~~~G~~vviVhGgg~~i~~~~l~~~~~~~~~~~~-~~~~~~~l~~ 92 (715)
++++|||+||+++.+. +..++++|+.|+..|.++|||||||++++..+. ..++++.|.+ ++.++.....
T Consensus 36 ~~~~VIKiGG~~l~~~--------~~~l~~dla~L~~~G~~~VlVHGggpqI~~~l~--~~gie~~~v~G~RVTd~~tl~ 105 (398)
T PRK04531 36 ERFAVIKVGGAVLRDD--------LEALASSLSFLQEVGLTPIVVHGAGPQLDAELD--AAGIEKETVNGLRVTSPEALA 105 (398)
T ss_pred CcEEEEEEChHHhhcC--------HHHHHHHHHHHHHCCCcEEEEECCCHHHHHHHH--HcCCCcEEECCEecCCHHHHH
Confidence 4789999999999852 588999999999999999999999999998763 3455555543 2322210000
Q ss_pred HHHHHcchHHHHHHHHHHhhcCCCCcceEEecccccCchhHHhHHHHHHHHHHhCCCeEEEeCCCceeccCCCCCCCCce
Q 005074 93 KACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGI 172 (715)
Q Consensus 93 ~~~~a~G~~~~~~l~~~~l~~~g~~~~~~~~~~~d~~~~~~~~~~~~~i~~ll~~g~iPVv~g~d~v~~~~~~~~~~~~~ 172 (715)
....++++... ...+.|+.+|+.|+|||+++ ++.+..|..
T Consensus 106 vv~~~l~~vn~--------------------------------~lv~~I~~~L~~g~IPVlsp--------lg~~~~G~~ 145 (398)
T PRK04531 106 IVRKVFQRSNL--------------------------------DLVEAVESSLRAGSIPVIAS--------LGETPSGQI 145 (398)
T ss_pred HHHHHHHHHHH--------------------------------HHHHHHHHHHHCCCEEEEeC--------cEECCCCcE
Confidence 01111110000 00122889999999999975 122234555
Q ss_pred e-ecchhHHHHHHhhcCCCEEEEeccCCccccCCCCCcCccccceeec-cchhhHHhcCCCCCcccCChHHHHHHHHHHH
Q 005074 173 F-WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIR-AKHQAEITFGDKSRVGRGGMTAKVNAAYCAA 250 (715)
Q Consensus 173 ~-~~~D~~A~~lA~~L~A~~li~lTDVdGV~~~dP~~p~a~~i~~is~-~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a~ 250 (715)
+ +|+|.+|.+||.+|+|++|+|+|||+|||+.+ +++|++|+. ++...++.. .+++|||++||++|..++
T Consensus 146 ~NvnaD~vA~~LA~aL~a~KLIfltdv~GV~d~~-----g~~i~~i~~~~e~~~l~~~----~~vtgGM~~KL~~a~~al 216 (398)
T PRK04531 146 LNINADVAANELVSALQPYKIIFLTGTGGLLDAD-----GKLISSINLSTEYDHLMQQ----PWINGGMKLKLEQIKELL 216 (398)
T ss_pred EEECHHHHHHHHHHHcCCCEEEEEECCCCccCCC-----CCCcccCCHHHHHHHHHhc----CCCCccHHHHHHHHHHHH
Confidence 6 99999999999999999999999999999753 789999997 466666553 378999999999999999
Q ss_pred HcCCcEEEEeCCCcchH-HHHHcCCcceeEEecC
Q 005074 251 CAGIPVVITSGFAMDSI-IKVLEGKRVGTLFHRD 283 (715)
Q Consensus 251 ~~gv~v~I~~g~~~~~l-~~~~tg~~iGT~i~~~ 283 (715)
++...+++++...++.+ .++++.+..||.+...
T Consensus 217 ~~~~~~~~V~i~~~~~Ll~eLft~~G~GT~I~~g 250 (398)
T PRK04531 217 DRLPLESSVSITSPSDLAKELFTHKGSGTLVRRG 250 (398)
T ss_pred hCCCcEEEEEecCCCHHHHHHccCCCCCeEEecC
Confidence 76434888888889998 7788888899999887
No 184
>TIGR00656 asp_kin_monofn aspartate kinase, monofunctional class. The Lys-sensitive enzyme of Bacillus subtilis resembles the E. coli form but is an alpha 2/beta 2 heterotetramer, where the beta subunit is translated from an in-phase alternative initiator at Met-246. The protein slr0657 from Synechocystis PCC6803 is extended by a duplication of the C-terminal region corresponding to the beta chain. Incorporation of a second copy of the C-terminal domain may be quite common in this subgroup of aspartokinases.
Probab=99.93 E-value=1.4e-25 Score=248.35 Aligned_cols=231 Identities=21% Similarity=0.302 Sum_probs=177.9
Q ss_pred ceEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhc-ccCCCcccccCccccchHH
Q 005074 15 KRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRK-LVNSSLADLQKPQNELDGK 93 (715)
Q Consensus 15 k~~VIKiGGs~l~~~~~~~~~~~l~~l~~~I~~l~~~G~~vviVhGgg~~i~~~~l~~~~-~~~~~~~~~~~~~~~l~~~ 93 (715)
+++|+||||+++.+. +.+++++++|+.+++.|++++|||||++.+++.+++... +.... .. ....+
T Consensus 1 ~~iViK~GGs~~~~~------~~i~~~~~~i~~~~~~g~~~vvV~sg~~~~t~~l~~~~~~~~~~~---~~----~~~~~ 67 (401)
T TIGR00656 1 ELIVQKFGGTSVGSG------ERIKNAARIVLKEKKEGHKVVVVVSAMSGVTDALVEISEKAIRDA---IT----PRERD 67 (401)
T ss_pred CcEEEEECCcCcCCH------HHHHHHHHHHHHHHHcCCCEEEEEeCCCCChHHHHHHHHHHhccC---CC----hHHHH
Confidence 368999999999975 358999999999999999999999999999987655432 11100 00 01124
Q ss_pred HHHHcchHHHHHHHHHHhhcCCCCcceE------EecccccCchhHHhHHH-HHHHHHHhCCCeEEEeCCCceeccCCCC
Q 005074 94 ACAAVGQSSLMALYDTLFSQLDVTSSQL------LVTDSDFRDEDFRKQLY-DTVQSLLDLRVIPIFNENDAVSTRKAPY 166 (715)
Q Consensus 94 ~~~a~G~~~~~~l~~~~l~~~g~~~~~~------~~~~~d~~~~~~~~~~~-~~i~~ll~~g~iPVv~g~d~v~~~~~~~ 166 (715)
.+.+.|+..+..++...|..+|+++.++ ++++.++.+......+. +.+.++++.|.|||++|+-+...
T Consensus 68 ~i~~~Ge~~s~~~~~~~l~~~g~~a~~l~~~~~~~~t~~~~~~~~~~~~~~~~~l~~~l~~~~vpVi~g~~~~~~----- 142 (401)
T TIGR00656 68 ELVSHGERLSSALFSGALRDLGVKAIWLDGGEAGIITDDNFGNAKIDIIATEERLLPLLEEGIIVVVAGFQGATE----- 142 (401)
T ss_pred HHhhHHHHHHHHHHHHHHHhCCCceEEeccccceEEeCCCCCceEeeecchHHHHHHHHhCCCEEEecCcceeCC-----
Confidence 6677788777778899999999988765 34444444333323334 78999999999999998322111
Q ss_pred CCCCce--e--ecchhHHHHHHhhcCCCEEEEeccCCccccCCCC-CcCccccceeeccchhhHHhcCCCCCcccCChHH
Q 005074 167 EDSSGI--F--WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTA 241 (715)
Q Consensus 167 ~~~~~~--~--~~~D~~A~~lA~~L~A~~li~lTDVdGV~~~dP~-~p~a~~i~~is~~e~~~~~~~g~~~~~~~ggM~~ 241 (715)
++.. + +++|++|+.+|.+|+|++|+++|||||||++||+ +|++++|++|+++|+.++...| ....
T Consensus 143 --~g~~~~lgrg~sD~~A~~lA~~l~A~~l~i~tdV~Gv~~~DP~~~~~a~~i~~ls~~ea~~l~~~G--------~~v~ 212 (401)
T TIGR00656 143 --KGYTTTLGRGGSDYTAALLAAALKADRVDIYTDVPGVYTTDPRVVEAAKRIDKISYEEALELATFG--------AKVL 212 (401)
T ss_pred --CCCEeecCCCcHHHHHHHHHHHcCCCEEEEEECCCCCCcCCCCCCCCcEECCccCHHHHHHHHHcC--------Cccc
Confidence 2222 2 5899999999999999999999999999999995 8999999999999999987754 2366
Q ss_pred HHHHHHHHHHcCCcEEEEeCCCcchHHHHHcCCcceeEEecC
Q 005074 242 KVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRD 283 (715)
Q Consensus 242 Kl~aa~~a~~~gv~v~I~~g~~~~~l~~~~tg~~iGT~i~~~ 283 (715)
+.+++..+.++++|++|.|++.|+ .||++...
T Consensus 213 ~~~a~~~a~~~~i~i~i~~~~~~~----------~gT~I~~~ 244 (401)
T TIGR00656 213 HPRTVEPAMRSGVPIEVRSSFDPE----------EGTLITNS 244 (401)
T ss_pred CHHHHHHHHHCCCeEEEEECCCCC----------CCeEEEeC
Confidence 778999999999999999998874 37777543
No 185
>PRK14556 pyrH uridylate kinase; Provisional
Probab=99.93 E-value=9.7e-25 Score=220.62 Aligned_cols=238 Identities=16% Similarity=0.203 Sum_probs=169.6
Q ss_pred hhhhhcccceEEEEeCCcccccCCC-cccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhcccCCCcccccC
Q 005074 7 SRAFVKDVKRLVVKVGTAVVTRSDG-RLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQK 85 (715)
Q Consensus 7 ~~~~~~~~k~~VIKiGGs~l~~~~~-~~~~~~l~~l~~~I~~l~~~G~~vviVhGgg~~i~~~~l~~~~~~~~~~~~~~~ 85 (715)
..++|+++|++|+|++|+++...++ .++.+.+++++++|+.+.+.|+++.||.|||..+--...+...++ .....
T Consensus 8 ~~~~~~~~~rvllKlsGe~l~~~~~~~~d~~~~~~~a~~i~~~~~~g~~i~iVvGGGni~Rg~~~~~~~~~----~r~~~ 83 (249)
T PRK14556 8 CSQKLPKLKRILLKLSGESLSADQGFGINVESAQPIINQIKTLTNFGVELALVVGGGNILRGGRANFGNKI----RRATA 83 (249)
T ss_pred cchhhhhhCEEEEEEehhhCcCCCCCCcCHHHHHHHHHHHHHHHhCCcEEEEEECCCHHHhCchhhccCCC----chhhh
Confidence 5567777999999999999986554 588889999999999999999999999999874432111100111 11111
Q ss_pred ccccchHHHHHHcchHHHHHHHHHHhhcCCCCcceEEecccccCchhHHhHHHHHHHHHHhCCCeEEEeCCCceeccCCC
Q 005074 86 PQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAP 165 (715)
Q Consensus 86 ~~~~l~~~~~~a~G~~~~~~l~~~~l~~~g~~~~~~~~~~~d~~~~~~~~~~~~~i~~ll~~g~iPVv~g~d~v~~~~~~ 165 (715)
-. .++.+-=. .. .++...|...|+++ .+.-.-.....++++ ..+.+.+.+++|.|+|+.|+
T Consensus 84 D~-----~GmlaT~i-Na-l~l~~~l~~~~~~~-~v~sa~~~~~~~e~~--~~~~~~~~l~~g~vvi~~gg--------- 144 (249)
T PRK14556 84 DS-----MGMIATMI-NA-LALRDMLISEGVDA-EVFSAKGVDGLLKVA--SAHEFNQELAKGRVLIFAGG--------- 144 (249)
T ss_pred hH-----HHHHHHHH-HH-HHHHHHHHHcCCCe-EEeeccccCcCCCCC--CHHHHHHHHhCCCEEEEECC---------
Confidence 01 11111111 11 14456777778764 221110111112333 23556678999999998761
Q ss_pred CCCCCceeecchhHHHHHHhhcCCCEEEEeccCCccccCCC-CCcCccccceeeccchhhHHhcCCCCCcccCChHHHHH
Q 005074 166 YEDSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVN 244 (715)
Q Consensus 166 ~~~~~~~~~~~D~~A~~lA~~L~A~~li~lTDVdGV~~~dP-~~p~a~~i~~is~~e~~~~~~~g~~~~~~~ggM~~Kl~ 244 (715)
.|.+++++|++|+.+|..++||.|+++|||||||+.|| ++|++++|++|+++|+.+. + .. ..+..
T Consensus 145 ---~G~p~~StD~lAallA~~l~Ad~Lii~TdVDGVYd~DP~~~p~A~~i~~I~~~e~~~~---~------l~--vmd~~ 210 (249)
T PRK14556 145 ---TGNPFVTTDTTASLRAVEIGADALLKATTVNGVYDKDPNKYSDAKRFDKVTFSEVVSK---E------LN--VMDLG 210 (249)
T ss_pred ---CCCCcCCcHHHHHHHHHHcCCCEEEEEeCCCccCCCCCCCCCCceEeeEEchhhhccc---c------hH--hHHHH
Confidence 22345889999999999999999999999999999999 5999999999999887531 1 01 23457
Q ss_pred HHHHHHHcCCcEEEEeCCCcchHHHHHcCCcceeEEe
Q 005074 245 AAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFH 281 (715)
Q Consensus 245 aa~~a~~~gv~v~I~~g~~~~~l~~~~tg~~iGT~i~ 281 (715)
++..+.++|++++|+|++.++.+.+++.|+..||++.
T Consensus 211 A~~~a~~~gIpi~I~ng~~~~~L~~~l~Ge~~GT~i~ 247 (249)
T PRK14556 211 AFTQCRDFGIPIYVFDLTQPNALVDAVLDSKYGTWVT 247 (249)
T ss_pred HHHHHHHCCCcEEEECCCCchHHHHHHcCCCCceEEE
Confidence 8888899999999999999999999999999999885
No 186
>PRK08210 aspartate kinase I; Reviewed
Probab=99.93 E-value=3e-25 Score=245.37 Aligned_cols=232 Identities=20% Similarity=0.289 Sum_probs=174.8
Q ss_pred cceEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhh-----HHHhhhhcccCCCcccccCccc
Q 005074 14 VKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVG-----RQRLRYRKLVNSSLADLQKPQN 88 (715)
Q Consensus 14 ~k~~VIKiGGs~l~~~~~~~~~~~l~~l~~~I~~l~~~G~~vviVhGgg~~i~-----~~~l~~~~~~~~~~~~~~~~~~ 88 (715)
|+++|||||||++++++ .+.+++++|+.+.+.|++++|||||+++.| +.+++...... + .....
T Consensus 1 m~~iViK~GGs~l~~~~------~~~~~~~~i~~~~~~g~~~vvV~sa~g~~G~~~~t~~l~~~~~~~~--~-~~~~~-- 69 (403)
T PRK08210 1 MKIIVQKFGGTSVSTEE------RRKMAVNKIKKALKEGYKVVVVVSAMGRKGDPYATDTLLSLVGEEF--S-EISKR-- 69 (403)
T ss_pred CCeEEEeECCcccCCHH------HHHHHHHHHHHHHHcCCCEEEEEeCCCCCCCCCccHHHHHHHHHhc--c-CCChH--
Confidence 36899999999999864 378999999999999999999996665554 33332211100 0 01110
Q ss_pred cchHHHHHHcchHHHHHHHHHHhhcCCCCcceE------EecccccCchhHHhHHHHHHHHHHhCCCeEEEeCCCceecc
Q 005074 89 ELDGKACAAVGQSSLMALYDTLFSQLDVTSSQL------LVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTR 162 (715)
Q Consensus 89 ~l~~~~~~a~G~~~~~~l~~~~l~~~g~~~~~~------~~~~~d~~~~~~~~~~~~~i~~ll~~g~iPVv~g~d~v~~~ 162 (715)
..+.+.++|+.....++...|...|+++..+ +++++++.+......+.+.|..+++.|.|||++|+.+. .
T Consensus 70 --~~~~l~~~Ge~~s~~~~~~~l~~~Gi~a~~l~~~~~~~~t~~~~~~~~v~~~~~~~l~~~l~~~~vpVi~G~~~~-~- 145 (403)
T PRK08210 70 --EQDLLMSCGEIISSVVFSNMLNENGIKAVALTGGQAGIITDDNFTNAKIIEVNPDRILEALEEGDVVVVAGFQGV-T- 145 (403)
T ss_pred --HHHHHHhHhHHHHHHHHHHHHHhCCCCeEEechHHccEEccCCCCceeeehhhHHHHHHHHhcCCEEEeeCeeec-C-
Confidence 1235688899888778889999999987655 45555554433333456899999999999999983221 1
Q ss_pred CCCCCCCCce--e--ecchhHHHHHHhhcCCCEEEEeccCCccccCCCC-CcCccccceeeccchhhHHhcCCCCCcccC
Q 005074 163 KAPYEDSSGI--F--WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRG 237 (715)
Q Consensus 163 ~~~~~~~~~~--~--~~~D~~A~~lA~~L~A~~li~lTDVdGV~~~dP~-~p~a~~i~~is~~e~~~~~~~g~~~~~~~g 237 (715)
.++.. + +++|++|+.+|.+|+|++|+|+|||||||++||+ +|++++|++|+++|+.++...|++
T Consensus 146 -----~~g~~~~l~rg~sD~~A~~lA~~l~A~~l~i~tDV~GV~~~dP~~~~~a~~i~~ls~~ea~~l~~~G~~------ 214 (403)
T PRK08210 146 -----ENGDITTLGRGGSDTTAAALGVALKAEYVDIYTDVDGIMTADPRIVEDARLLDVVSYNEVFQMAYQGAK------ 214 (403)
T ss_pred -----CCCCEEEeCCCchHHHHHHHHHHcCCCEEEEEECCCCCCcCCCCcCCCCeECCccCHHHHHHHHHCCcc------
Confidence 13333 2 4899999999999999999999999999999995 899999999999999998876543
Q ss_pred ChHHHHHHHHHHHHcCCcEEEEeCCCcchHHHHHcCCcceeEEecC
Q 005074 238 GMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRD 283 (715)
Q Consensus 238 gM~~Kl~aa~~a~~~gv~v~I~~g~~~~~l~~~~tg~~iGT~i~~~ 283 (715)
..|.+++..+.++++|++|.|.+.+. .||++...
T Consensus 215 --v~~~~a~~~~~~~~i~i~i~~~~~~~----------~gT~I~~~ 248 (403)
T PRK08210 215 --VIHPRAVEIAMQANIPLRIRSTYSDS----------PGTLITSL 248 (403)
T ss_pred --ccCHHHHHHHHHCCCeEEEEecCCCc----------CCcEEEec
Confidence 45668999999999999999987542 38888654
No 187
>PRK06635 aspartate kinase; Reviewed
Probab=99.93 E-value=5e-25 Score=244.04 Aligned_cols=232 Identities=22% Similarity=0.271 Sum_probs=175.5
Q ss_pred cceEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhcccCCCcccccCccccchHH
Q 005074 14 VKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGK 93 (715)
Q Consensus 14 ~k~~VIKiGGs~l~~~~~~~~~~~l~~l~~~I~~l~~~G~~vviVhGgg~~i~~~~l~~~~~~~~~~~~~~~~~~~l~~~ 93 (715)
|+++||||||+++.++ +.+++++++|+.+.+.|++++|||||++..+..+++...... ... .. ...+
T Consensus 1 m~~iViK~GGs~l~~~------~~~~~~~~~i~~~~~~g~~~vvV~sg~~~~~~~l~~~~~~~~-~~~--~~----~~~~ 67 (404)
T PRK06635 1 MALIVQKFGGTSVGDV------ERIKRVAERVKAEVEAGHQVVVVVSAMGGTTDELLDLAKEVS-PLP--DP----RELD 67 (404)
T ss_pred CCeEEEeECCcccCCH------HHHHHHHHHHHHHHHcCCCEEEEEeCCCCcHHHHHHHHHHhc-cCC--CH----HHHH
Confidence 4689999999999874 358999999999999999999999986666665544332110 000 11 1124
Q ss_pred HHHHcchHHHHHHHHHHhhcCCCCcc-----eE-EecccccCchhHHhHHHHHHHHHHhCCCeEEEeCCCceeccCCCCC
Q 005074 94 ACAAVGQSSLMALYDTLFSQLDVTSS-----QL-LVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYE 167 (715)
Q Consensus 94 ~~~a~G~~~~~~l~~~~l~~~g~~~~-----~~-~~~~~d~~~~~~~~~~~~~i~~ll~~g~iPVv~g~d~v~~~~~~~~ 167 (715)
.+.++|+.....++...|...|+++. ++ ++++.++.+......+.+.++.+++.|.|||++|+-+...
T Consensus 68 ~~~~~Ge~~~~~~~~~~l~~~g~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ipVi~g~~~~~~------ 141 (404)
T PRK06635 68 MLLSTGEQVSVALLAMALQSLGVKARSFTGWQAGIITDSAHGKARITDIDPSRIREALDEGDVVVVAGFQGVDE------ 141 (404)
T ss_pred HHhhhhHHHHHHHHHHHHHhCCCCeEEeChhhCCEEecCCCCceEeeecCHHHHHHHHhCCCEEEecCccEeCC------
Confidence 67788987777788899999998863 33 4455555443333344688999999999999998432221
Q ss_pred CCCcee----ecchhHHHHHHhhcCCCEEEEeccCCccccCCCC-CcCccccceeeccchhhHHhcCCCCCcccCChHHH
Q 005074 168 DSSGIF----WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAK 242 (715)
Q Consensus 168 ~~~~~~----~~~D~~A~~lA~~L~A~~li~lTDVdGV~~~dP~-~p~a~~i~~is~~e~~~~~~~g~~~~~~~ggM~~K 242 (715)
++... +++|++|+.+|.+|+|++|+++|||||||++||+ +|++++|++++++|+.++... |.+..|
T Consensus 142 -~g~~~~l~rg~sD~~A~~lA~~l~A~~l~~~tDV~Gv~~~dP~~~~~a~~i~~i~~~e~~~l~~~--------g~~~~~ 212 (404)
T PRK06635 142 -DGEITTLGRGGSDTTAVALAAALKADECEIYTDVDGVYTTDPRIVPKARKLDKISYEEMLELASL--------GAKVLH 212 (404)
T ss_pred -CCCEEecCCCChHHHHHHHHHHhCCCEEEEEEcCCCCCcCCCCCCCCceECCccCHHHHHHHHHc--------CCcccC
Confidence 23321 5999999999999999999999999999999995 899999999999999987654 445678
Q ss_pred HHHHHHHHHcCCcEEEEeCCCcchHHHHHcCCcceeEEecC
Q 005074 243 VNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRD 283 (715)
Q Consensus 243 l~aa~~a~~~gv~v~I~~g~~~~~l~~~~tg~~iGT~i~~~ 283 (715)
.+++..+.++|++++|.|++.+ ..||++...
T Consensus 213 ~~a~~~~~~~~i~~~i~~~~~~----------~~gT~i~~~ 243 (404)
T PRK06635 213 PRSVEYAKKYNVPLRVRSSFSD----------NPGTLITGE 243 (404)
T ss_pred HHHHHHHHHcCceEEEEcCCCC----------CCCCEEeeC
Confidence 8899999999999999998743 348887654
No 188
>TIGR02076 pyrH_arch uridylate kinase, putative. This family consists of the archaeal and spirochete proteins most closely related to bacterial uridylate kinases (TIGR02075), an enzyme involved in pyrimidine biosynthesis. Members are likely, but not known, to be functionally equivalent to their bacterial counterparts. However, substantial sequence differences suggest that regulatory mechanisms may be different; the bacterial form is allosterically regulated by GTP.
Probab=99.93 E-value=9.2e-25 Score=221.87 Aligned_cols=218 Identities=19% Similarity=0.266 Sum_probs=157.5
Q ss_pred EEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhcccCCCcccccCccccchHHHHH
Q 005074 17 LVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACA 96 (715)
Q Consensus 17 ~VIKiGGs~l~~~~~~~~~~~l~~l~~~I~~l~~~G~~vviVhGgg~~i~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~ 96 (715)
+|||||||+++++. +.+.+.+++++|+++.+. ++++||||||... +.+++...... .. ...+...+..
T Consensus 1 iViKlGGs~l~~~~---~~~~i~~i~~~i~~~~~~-~~viiV~ggG~~a-~~~~~~~~~~~-----~~--~~~~~~~g~~ 68 (221)
T TIGR02076 1 IVISLGGSVLSPEI---DAEFIKEFANILRKLSDE-HKVGVVVGGGKTA-RRYIGVARELG-----AS--ETFLDEIGID 68 (221)
T ss_pred CEEEechhhcCCCC---CHHHHHHHHHHHHHHHhC-CeEEEEECCcHHH-HHHHHHHHHcC-----CC--HHHHHHhhhH
Confidence 58999999999764 567899999999999876 8999999887643 44333222210 00 0000011111
Q ss_pred HcchHHHHHHHHHHhhcCCCCcceEEecccccCchhHHhHHHHHHHHHHhCCCeEEEeCCCceeccCCCCCCCCceeecc
Q 005074 97 AVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDN 176 (715)
Q Consensus 97 a~G~~~~~~l~~~~l~~~g~~~~~~~~~~~d~~~~~~~~~~~~~i~~ll~~g~iPVv~g~d~v~~~~~~~~~~~~~~~~~ 176 (715)
++.....+++.+|...+++.... + .....++++.|.+||++|+. + .+++
T Consensus 69 --~~~ln~~~l~~ll~~~~~~~~~~-----~----------~~~~~~~l~~g~ipv~~G~~---~-----------~~s~ 117 (221)
T TIGR02076 69 --ATRLNAMLLIAALGDDAYPKVPE-----N----------FEEALEAMSLGKIVVMGGTH---P-----------GHTT 117 (221)
T ss_pred --HHHHHHHHHHHHHHhcCCCCcCC-----C----------HHHHHHHHHcCCEEEEcCCC---C-----------CCCc
Confidence 12122223445555445443211 0 12335678999999998731 1 1678
Q ss_pred hhHHHHHHhhcCCCEEEEeccCCccccCCC-CCcCccccceeeccchhhHHhcCCCCCcccC-ChHHHHHHHHHHHHcCC
Q 005074 177 DSLAGLLALELKADLLVLLSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGDKSRVGRG-GMTAKVNAAYCAACAGI 254 (715)
Q Consensus 177 D~~A~~lA~~L~A~~li~lTDVdGV~~~dP-~~p~a~~i~~is~~e~~~~~~~g~~~~~~~g-gM~~Kl~aa~~a~~~gv 254 (715)
|++|+.+|.+|+|++|+++|||||||++|| ++|++++|++|+++|+.++...+ ...+| +|..|+.++..+.+.|+
T Consensus 118 D~~A~~lA~~l~A~~li~ltdVdGvy~~dP~~~~~a~~i~~i~~~e~~~~~~~~---~~~~g~~~~~~~~a~~~~~~~~i 194 (221)
T TIGR02076 118 DAVAALLAEFSKADLLINATNVDGVYDKDPKKDPDAKKFDKLTPEELVEIVGSS---SVKAGSNEVVDPLAAKIIERSKI 194 (221)
T ss_pred HHHHHHHHHHcCCCEEEEEeCCCcccCCCCCCCCCCeEeeEECHHHHHHHhcCC---CccCCCCceeHHHHHHHHHHCCC
Confidence 999999999999999999999999999999 48999999999999988755422 24456 67789999999999999
Q ss_pred cEEEEeCCCcchHHHHHcCCcceeEE
Q 005074 255 PVVITSGFAMDSIIKVLEGKRVGTLF 280 (715)
Q Consensus 255 ~v~I~~g~~~~~l~~~~tg~~iGT~i 280 (715)
+++|+||+.++++.+.+.|+..||.+
T Consensus 195 ~v~I~~g~~~~~l~~~l~g~~~GT~i 220 (221)
T TIGR02076 195 RTIVVNGRDPENLEKVLKGEHVGTII 220 (221)
T ss_pred cEEEECCCCccHHHHHHCCCCCCeEe
Confidence 99999999999999999999889986
No 189
>PRK09411 carbamate kinase; Reviewed
Probab=99.93 E-value=1.4e-24 Score=223.14 Aligned_cols=242 Identities=21% Similarity=0.267 Sum_probs=172.2
Q ss_pred ceEEEEeCCcccccCCCcc----cHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhcccCCCcccccCccccc
Q 005074 15 KRLVVKVGTAVVTRSDGRL----ALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNEL 90 (715)
Q Consensus 15 k~~VIKiGGs~l~~~~~~~----~~~~l~~l~~~I~~l~~~G~~vviVhGgg~~i~~~~l~~~~~~~~~~~~~~~~~~~l 90 (715)
+++||.+||+++..++.+. +..+++..++.|+.+.+. |++||+||+|||+|...+...... .. ..+.|
T Consensus 2 ~~iVvAlGGNAl~~~g~~~~~~~q~~~v~~~a~~ia~l~~~-~~~vitHGNGPQVG~l~~~~~~~~-----~~--~~~pl 73 (297)
T PRK09411 2 KTLVVALGGNALLQRGEALTAENQYRNIASAVPALARLARS-YRLAIVHGNGPQVGLLALQNLAWK-----EV--EPYPL 73 (297)
T ss_pred CeEEEEcCchhhcCCCCCcCHHHHHHHHHHHHHHHHHHHHc-CCEEEEeCCccHHHHHHHHHHhhc-----CC--CCCCc
Confidence 6899999999998765432 234788999999999988 999999999999998765432211 11 22334
Q ss_pred hHHHHHHcchHHHHHHHHHHhhcCCCCc------ceEEecccc--cCch-----------------------------hH
Q 005074 91 DGKACAAVGQSSLMALYDTLFSQLDVTS------SQLLVTDSD--FRDE-----------------------------DF 133 (715)
Q Consensus 91 ~~~~~~a~G~~~~~~l~~~~l~~~g~~~------~~~~~~~~d--~~~~-----------------------------~~ 133 (715)
.--.+.+-|..+. +++..|+..++.. .|+++...| |.++ ++
T Consensus 74 d~~~a~sqG~iGy--~l~q~l~~~~~~~~v~t~~Tq~~Vd~~DpaF~~PtKpiG~~y~~e~a~~l~~e~g~~~~~dg~g~ 151 (297)
T PRK09411 74 DVLVAESQGMIGY--MLAQSLSAQPQMPPVTTVLTRIEVSPDDPAFLQPEKFIGPVYQPEEQEALEAAYGWQMKRDGKYL 151 (297)
T ss_pred hhhhhhcccHHHH--HHHHHHHHcCCCCCeEEEEEEEEECCCCccccCCCCccCCccCHHHHHHHHHhcCCEEEecCCce
Confidence 3334455555554 3456665555321 132222121 2211 00
Q ss_pred H----------hHHHHHHHHHHhCCCeEEEeCCCceeccCCCCCCCCce-eecchhHHHHHHhhcCCCEEEEeccCCccc
Q 005074 134 R----------KQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGI-FWDNDSLAGLLALELKADLLVLLSDVEGLY 202 (715)
Q Consensus 134 ~----------~~~~~~i~~ll~~g~iPVv~g~d~v~~~~~~~~~~~~~-~~~~D~~A~~lA~~L~A~~li~lTDVdGV~ 202 (715)
+ ..+.+.|+.||++|+|||.+|...+... .+.++.. ++|+|.+|+.||.+|+||+|+|+|||||||
T Consensus 152 rrVVpSP~P~~iVe~~~I~~Ll~~G~IVI~~gGGGIPV~---~~~~G~e~vIDkD~~Aa~LA~~L~Ad~LIiLTDVdGV~ 228 (297)
T PRK09411 152 RRVVASPQPRKILDSEAIELLLKEGHVVICSGGGGVPVT---EDGAGSEAVIDKDLAAALLAEQINADGLVILTDADAVY 228 (297)
T ss_pred EEEccCCCCcceECHHHHHHHHHCCCEEEecCCCCCCeE---EcCCCeEEecCHHHHHHHHHHHhCCCEEEEEeCchhhc
Confidence 0 0357899999999999888764444331 1112333 399999999999999999999999999999
Q ss_pred cCCCCCcCccccceeeccchhhHHhcCCCCCcccCChHHHHHHHHHHHHcCC-cEEEEeCCCcchHHHHHcCCcceeEEe
Q 005074 203 SGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGI-PVVITSGFAMDSIIKVLEGKRVGTLFH 281 (715)
Q Consensus 203 ~~dP~~p~a~~i~~is~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a~~~gv-~v~I~~g~~~~~l~~~~tg~~iGT~i~ 281 (715)
.++ .+|++++|++++.+|+++++. .+|||.||+++|+.+++.+. +++|++ ++.+.+.+.|+ .||.+.
T Consensus 229 ~n~-~~p~~~~I~~it~~e~~~~~~-------~~GgM~pKVeAA~~~v~~~g~~a~I~~---l~~~~~~l~G~-~GT~I~ 296 (297)
T PRK09411 229 ENW-GTPQQRAIRHATPDELAPFAK-------ADGAMGPKVTAVSGYVRSRGKPAWIGA---LSRIEETLAGE-AGTCIS 296 (297)
T ss_pred cCC-CCCCCcCCCCcCHHHHHHhcc-------CCCCcHHHHHHHHHHHHhCCCeEEECC---hhHHHHHHCCC-CCeEEe
Confidence 875 478899999999999876543 48999999999999998754 598875 67788888887 699874
No 190
>COG0527 LysC Aspartokinases [Amino acid transport and metabolism]
Probab=99.93 E-value=1.1e-24 Score=239.59 Aligned_cols=239 Identities=22% Similarity=0.292 Sum_probs=185.4
Q ss_pred ceEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhcccC-----------------
Q 005074 15 KRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVN----------------- 77 (715)
Q Consensus 15 k~~VIKiGGs~l~~~~~~~~~~~l~~l~~~I~~l~~~G~~vviVhGgg~~i~~~~l~~~~~~~----------------- 77 (715)
+++|.||||+++.+. +++.+.++.|++..+.|.++|+|.++++.+++.+++......
T Consensus 2 ~~iV~KFGGTSva~~------e~i~~va~iv~~~~~~g~~vVVVvSA~~~vTd~Lv~~a~~~~~~~~~~~~~~~~~~~~e 75 (447)
T COG0527 2 RLIVQKFGGTSVADA------ERILRVADIVKEDSEEGVKVVVVVSAMGGVTDLLVALAEGAESGRDAVAEQRHRDIASE 75 (447)
T ss_pred ceEEEEeCCcccCCH------HHHHHHHHHHHhhhhcCCcEEEEECCCCCchHHHHHHHhhcccccchhHHHHHHHHHHH
Confidence 389999999999975 468999999999998899999999998878777765554211
Q ss_pred --CCccc---ccCcc----------------ccchHHHHHHcchHHHHHHHHHHhhcCCCCcceE------EecccccCc
Q 005074 78 --SSLAD---LQKPQ----------------NELDGKACAAVGQSSLMALYDTLFSQLDVTSSQL------LVTDSDFRD 130 (715)
Q Consensus 78 --~~~~~---~~~~~----------------~~l~~~~~~a~G~~~~~~l~~~~l~~~g~~~~~~------~~~~~d~~~ 130 (715)
..+.. ..... ..-..+.+.+.|+.....++...|+..|+++..+ +.++.++.+
T Consensus 76 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~ilS~GE~~Sa~lla~~L~~~Gv~A~~~~~~~~~i~t~~~~~~ 155 (447)
T COG0527 76 LILDPFIAARLAEVIAEFKKVLLGIALLGEVSPRERDELLSLGERLSAALLAAALNALGVDARSLDGRQAGIATDSNHGN 155 (447)
T ss_pred HhhcchhhhhHhhhHhhhhHHhhhhhhccCCCHHHHHHHHhhchHHHHHHHHHHHHhCCCceEEEchHHceeeecCcccc
Confidence 11100 00000 0011257789999999899999999999887533 345555666
Q ss_pred hhHHhHHHHH-HHHHHhCCCeEEEeCCCceeccCCCCCCCCc--ee--ecchhHHHHHHhhcCCCEEEEeccCCccccCC
Q 005074 131 EDFRKQLYDT-VQSLLDLRVIPIFNENDAVSTRKAPYEDSSG--IF--WDNDSLAGLLALELKADLLVLLSDVEGLYSGP 205 (715)
Q Consensus 131 ~~~~~~~~~~-i~~ll~~g~iPVv~g~d~v~~~~~~~~~~~~--~~--~~~D~~A~~lA~~L~A~~li~lTDVdGV~~~d 205 (715)
........+. +..+++.|.|||++|+.+... +|. ++ ++||+.|+.||.+|+||.+.++|||||||+.|
T Consensus 156 a~i~~~~~~~~l~~~~~~~~v~Vv~GF~G~~~-------~G~~tTLGRGGSD~SA~~laa~l~Ad~~~I~TDVdGI~TaD 228 (447)
T COG0527 156 ARILDEDSERRLLRLLEEGKVPVVAGFQGINE-------DGETTTLGRGGSDYSAAALAAALGADEVEIWTDVDGVYTAD 228 (447)
T ss_pred cccchhhhhhhHHHHhcCCcEEEecCceeecC-------CCCEEEeCCCcHHHHHHHHHHHcCCCEEEEEECCCCCccCC
Confidence 5544444455 888999999999999655443 222 24 99999999999999999999999999999999
Q ss_pred CC-CcCccccceeeccchhhHHhcCCCCCcccCChHHHHHHHHHHHHcCCcEEEEeCCCcchHHHHHcCCcceeEEecC
Q 005074 206 PS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRD 283 (715)
Q Consensus 206 P~-~p~a~~i~~is~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a~~~gv~v~I~~g~~~~~l~~~~tg~~iGT~i~~~ 283 (715)
|+ .|++++|++|||+|+.++...|++ .-+.++...+.+.+||++|.|.+.|+ ..||++...
T Consensus 229 PRiVp~Ar~i~~isyeEa~ELA~~GAk--------VLHprav~pa~~~~Ip~~i~~t~~p~---------~~GTlI~~~ 290 (447)
T COG0527 229 PRIVPDARLLPEISYEEALELAYLGAK--------VLHPRAVEPAMRSGIPLRIKNTFNPD---------APGTLITAE 290 (447)
T ss_pred CCCCCcceEcCccCHHHHHHHHHCCch--------hcCHHHHHHHHhcCCcEEEEecCCCC---------CCceEEecC
Confidence 95 999999999999999998887754 33558999999999999999988774 479999877
No 191
>cd04253 AAK_UMPK-PyrH-Pf AAK_UMPK-PyrH-Pf: UMP kinase (UMPK)-Pf, the mostly archaeal uridine monophosphate kinase (uridylate kinase) enzymes that catalyze UMP phosphorylation and play a key role in pyrimidine nucleotide biosynthesis; regulation of this process is via feed-back control and via gene repression of carbamoyl phosphate synthetase (the first enzyme of the pyrimidine biosynthesis pathway). The UMP kinase of Pyrococcus furiosus (Pf) is known to function as a homohexamer, with GTP and UTP being allosteric effectors. Like other related enzymes (carbamate kinase, aspartokinase, and N-acetylglutamate kinase) the E. coli and most bacterial UMPKs have a conserved, N-terminal, lysine residue proposed to function in the catalysis of the phosphoryl group transfer, whereas most archaeal UMPKs (this CD) appear to lack this residue and the Pyrococcus furiosus structure has an additional Mg ion bound to the ATP molecule which is proposed to function as the catalysis instead. Members of thi
Probab=99.93 E-value=1.9e-24 Score=219.45 Aligned_cols=217 Identities=21% Similarity=0.296 Sum_probs=156.2
Q ss_pred eEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhcccCCCcccccCccccchHHHH
Q 005074 16 RLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKAC 95 (715)
Q Consensus 16 ~~VIKiGGs~l~~~~~~~~~~~l~~l~~~I~~l~~~G~~vviVhGgg~~i~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~ 95 (715)
++|||||||+++++. +.+.+.++++.|+.+.. |++++||||||. +++.+...+.... .... .+...+.
T Consensus 1 ~iViKlGGs~l~~~~---~~~~i~~~~~~i~~~~~-~~~iiiV~GgG~-~a~~~~~~~~~~~--~~~~-----~~d~~g~ 68 (221)
T cd04253 1 RIVISLGGSVLAPEK---DADFIKEYANVLRKISD-GHKVAVVVGGGR-LAREYISVARKLG--ASEA-----FLDEIGI 68 (221)
T ss_pred CEEEEeccceeCCCC---ChHHHHHHHHHHHHHhC-CCEEEEEECCCH-HHHHHHHHHHHcC--CCHH-----HHHHhcC
Confidence 579999999998753 56779999999998865 789999999876 5555433332211 0000 0001111
Q ss_pred HHcchHHHHH-HHHHHhhcCCCCcceEEecccccCchhHHhHHHHHHHHHHhCCCeEEEeCCCceeccCCCCCCCCceee
Q 005074 96 AAVGQSSLMA-LYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFW 174 (715)
Q Consensus 96 ~a~G~~~~~~-l~~~~l~~~g~~~~~~~~~~~d~~~~~~~~~~~~~i~~ll~~g~iPVv~g~d~v~~~~~~~~~~~~~~~ 174 (715)
.+. .+.. ++..++. .|+++.++ ..+.+.++|+.|.+||++|+. + ..
T Consensus 69 ~~~---~ln~~~~~~~l~-~~~~~~~~---------------~~~~~~~~l~~g~vpv~~G~~---~-----------~~ 115 (221)
T cd04253 69 MAT---RLNARLLIAALG-DAYPPVPT---------------SYEEALEAMFTGKIVVMGGTE---P-----------GQ 115 (221)
T ss_pred HHH---HHHHHHHHHHHh-cCCCcCCC---------------CHHHHHHHHHcCCeEEEECCC---C-----------CC
Confidence 111 1111 2223332 44432211 134567889999999999831 1 15
Q ss_pred cchhHHHHHHhhcCCCEEEEeccCCccccCCCC-CcCccccceeeccchhhHHhcCCCCCcccCC-hHHHHHHHHHHHHc
Q 005074 175 DNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGG-MTAKVNAAYCAACA 252 (715)
Q Consensus 175 ~~D~~A~~lA~~L~A~~li~lTDVdGV~~~dP~-~p~a~~i~~is~~e~~~~~~~g~~~~~~~gg-M~~Kl~aa~~a~~~ 252 (715)
++|++|+.+|.+|+|++|+++|||||||++||+ +|++++|++|+++|+.++.... + ...|+ |..|+.++..+.++
T Consensus 116 s~D~~a~~lA~~l~a~~li~~tdVdGVy~~dP~~~~~a~~i~~i~~~e~~~~~~~~-~--~~~g~~~~~d~~a~~~~~~~ 192 (221)
T cd04253 116 STDAVAALLAERLGADLLINATNVDGVYSKDPRKDPDAKKFDRLSADELIDIVGKS-S--WKAGSNEPFDPLAAKIIERS 192 (221)
T ss_pred ccHHHHHHHHHHcCCCEEEEEeCCCeeECCCCCCCCCCeEeeEeCHHHHHHHccCC-C--cCCCCCcchHHHHHHHHHHC
Confidence 789999999999999999999999999999995 8999999999999988755431 1 22343 67899999999999
Q ss_pred CCcEEEEeCCCcchHHHHHcCCcceeEE
Q 005074 253 GIPVVITSGFAMDSIIKVLEGKRVGTLF 280 (715)
Q Consensus 253 gv~v~I~~g~~~~~l~~~~tg~~iGT~i 280 (715)
|++++|+||+.|+++.+.++|+..||.+
T Consensus 193 gi~~~I~~g~~p~~l~~~l~g~~~GT~I 220 (221)
T cd04253 193 GIKTIVVDGRDPENLERALKGEFVGTII 220 (221)
T ss_pred CCeEEEECCCCccHHHHHHCCCCCCeEe
Confidence 9999999999999999999999899986
No 192
>COG0549 ArcC Carbamate kinase [Amino acid transport and metabolism]
Probab=99.92 E-value=2e-23 Score=208.09 Aligned_cols=255 Identities=22% Similarity=0.309 Sum_probs=188.2
Q ss_pred ceEEEEeCCcccccCCCc----ccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhcccCCCcccccCccccc
Q 005074 15 KRLVVKVGTAVVTRSDGR----LALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNEL 90 (715)
Q Consensus 15 k~~VIKiGGs~l~~~~~~----~~~~~l~~l~~~I~~l~~~G~~vviVhGgg~~i~~~~l~~~~~~~~~~~~~~~~~~~l 90 (715)
+++||.+||++|-.++.. -+.++++..++.|+.+.+.|+++||.||+|||+|..++......+ .. ....+.|
T Consensus 1 ~~iVvALGGNAll~~g~~~tae~Q~~~v~~ta~~i~~l~~~g~e~VitHGNGPQVG~l~lq~~aa~~--~~--~~p~~PL 76 (312)
T COG0549 1 KRIVVALGGNALLQRGEPLTAEAQYEAVKITAEQIADLIASGYEVVITHGNGPQVGLLLLQNEAADS--EK--GVPAYPL 76 (312)
T ss_pred CeEEEEecchhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCeEEEEcCCCchHHHHHHHhhhhcc--cc--CCCCccH
Confidence 579999999999877542 235778999999999999999999999999999997764322110 11 1222344
Q ss_pred hHHHHHHcchHHHH--HHHHHHhhcCCCCc------ceEEecccc--cCch-----------------------------
Q 005074 91 DGKACAAVGQSSLM--ALYDTLFSQLDVTS------SQLLVTDSD--FRDE----------------------------- 131 (715)
Q Consensus 91 ~~~~~~a~G~~~~~--~l~~~~l~~~g~~~------~~~~~~~~d--~~~~----------------------------- 131 (715)
.--.+.+-|+.+.+ ..+.+.|...++.. .|+.+..+| |.++
T Consensus 77 d~~~AmsQG~IGy~l~qal~n~l~~~~~~~~v~tvvTqv~VD~nDPAF~nPtKpIGpfY~~eea~~l~~~~gw~~keD~~ 156 (312)
T COG0549 77 DVLVAMSQGMIGYMLQQALRNELPRRGLEKPVVTVVTQVEVDANDPAFLNPTKPIGPFYSEEEAEELAKEYGWVFKEDAG 156 (312)
T ss_pred HHHhHhhhhHHHHHHHHHHHHHHhhcCCCCceeEEEEEEEEcCCCccccCCCCCCCCCcCHHHHHHHHhhcCcEEEecCC
Confidence 44456666776643 35556776777531 233332222 2211
Q ss_pred -hHHh----------HHHHHHHHHHhCCCeEEEeCCCceeccCCCCCCCCc-eeecchhHHHHHHhhcCCCEEEEeccCC
Q 005074 132 -DFRK----------QLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSG-IFWDNDSLAGLLALELKADLLVLLSDVE 199 (715)
Q Consensus 132 -~~~~----------~~~~~i~~ll~~g~iPVv~g~d~v~~~~~~~~~~~~-~~~~~D~~A~~lA~~L~A~~li~lTDVd 199 (715)
++++ ...+.|+.|+++|.++|-.|...|....-+....|. .++|.|.+++.||.+++||.|+|+||||
T Consensus 157 rG~RRVVpSP~P~~IvE~~~Ik~L~~~g~vVI~~GGGGIPVv~~~~~~~GVeAVIDKDlasalLA~~i~AD~liILTdVd 236 (312)
T COG0549 157 RGYRRVVPSPKPVRIVEAEAIKALLESGHVVIAAGGGGIPVVEEGAGLQGVEAVIDKDLASALLAEQIDADLLIILTDVD 236 (312)
T ss_pred CCeeEecCCCCCccchhHHHHHHHHhCCCEEEEeCCCCcceEecCCCcceeeEEEccHHHHHHHHHHhcCCEEEEEeccc
Confidence 0110 346899999999999999987777654322111111 2499999999999999999999999999
Q ss_pred ccccCCCCCcCccccceeeccchhhHHhcCCCCCcccCChHHHHHHHHHHHHcCCc-EEEEeCCCcchHHHHHcCCccee
Q 005074 200 GLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIP-VVITSGFAMDSIIKVLEGKRVGT 278 (715)
Q Consensus 200 GV~~~dP~~p~a~~i~~is~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a~~~gv~-v~I~~g~~~~~l~~~~tg~~iGT 278 (715)
+||.++. .|+.+.+++++.+|+++++..+ .+..|.|.||++||+.+++++-+ ++|.+ .+.+.+.+.|+ .||
T Consensus 237 ~Vy~n~g-kp~q~~L~~v~~~e~~~yl~eg---~Fa~GSM~PKVeAai~Fv~~~gk~A~Its---Le~~~~~l~g~-~GT 308 (312)
T COG0549 237 AVYVNFG-KPNQQALDRVTVDEMEKYLAEG---QFAAGSMGPKVEAAISFVENTGKPAIITS---LENAEAALEGK-AGT 308 (312)
T ss_pred hheecCC-CccchhhcccCHHHHHHHHhcC---CCCCCCccHHHHHHHHHHHcCCCceEECc---HHHHHHHhccC-CCc
Confidence 9999875 6789999999999999988875 58899999999999999998555 99987 88888888885 788
Q ss_pred EEe
Q 005074 279 LFH 281 (715)
Q Consensus 279 ~i~ 281 (715)
.+.
T Consensus 309 ~I~ 311 (312)
T COG0549 309 VIV 311 (312)
T ss_pred Eec
Confidence 764
No 193
>PRK07431 aspartate kinase; Provisional
Probab=99.92 E-value=6.1e-24 Score=245.63 Aligned_cols=234 Identities=21% Similarity=0.266 Sum_probs=172.9
Q ss_pred cceEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhcccCCCcccccCccccchHH
Q 005074 14 VKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGK 93 (715)
Q Consensus 14 ~k~~VIKiGGs~l~~~~~~~~~~~l~~l~~~I~~l~~~G~~vviVhGgg~~i~~~~l~~~~~~~~~~~~~~~~~~~l~~~ 93 (715)
|+++|+||||+++.+. +.+++++++|+.+.+.|+++||||||++.+.+.++......... ...+ ..+
T Consensus 1 m~~iViKfGGss~~~~------~~i~~~a~~I~~~~~~g~~vvvV~sa~g~~t~~l~~~~~~~t~~-~~~~------~~~ 67 (587)
T PRK07431 1 MALIVQKFGGTSVGSV------ERIQAVAQRIARTKEAGNDVVVVVSAMGKTTDELVKLAKEISSN-PPRR------EMD 67 (587)
T ss_pred CCeEEEEECchhcCCH------HHHHHHHHHHHHHHHCCCCEEEEECCCCchhHHHHHHHHHhccC-CCHH------HHH
Confidence 3589999999999764 46899999999999999999999997666666554332221100 0001 124
Q ss_pred HHHHcchHHHHHHHHHHhhcCCCCcceE------EecccccCchhHHhHHHHHHHHHHhCCCeEEEeCCCceeccCCCCC
Q 005074 94 ACAAVGQSSLMALYDTLFSQLDVTSSQL------LVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYE 167 (715)
Q Consensus 94 ~~~a~G~~~~~~l~~~~l~~~g~~~~~~------~~~~~d~~~~~~~~~~~~~i~~ll~~g~iPVv~g~d~v~~~~~~~~ 167 (715)
.+.+.|+.....++...|...|+++..+ ++++..+..........+.|.++++.|.|||++|+.+.....
T Consensus 68 ~~ls~Ge~~s~~l~~~~l~~~gi~a~~l~~~~~~~~~~~~~~~~~i~~~~~~~l~~~l~~g~vpVv~g~~g~~~~~---- 143 (587)
T PRK07431 68 MLLSTGEQVSIALLSMALHELGQPAISLTGAQVGIVTESEHGRARILEIKTDRIQRHLDAGKVVVVAGFQGISLSS---- 143 (587)
T ss_pred HHHHHhHHHHHHHHHHHHHHCCCCeEEechhHcCeEecCCCCceeeeeccHHHHHHHHhCCCeEEecCCcCCCCCC----
Confidence 6677788777777888888999875433 333333322222223457899999999999999843322110
Q ss_pred CCCce----eecchhHHHHHHhhcCCCEEEEeccCCccccCCCC-CcCccccceeeccchhhHHhcCCCCCcccCChHHH
Q 005074 168 DSSGI----FWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAK 242 (715)
Q Consensus 168 ~~~~~----~~~~D~~A~~lA~~L~A~~li~lTDVdGV~~~dP~-~p~a~~i~~is~~e~~~~~~~g~~~~~~~ggM~~K 242 (715)
.+.. ++++|++|+.+|.+|+|++|+|+|||||||++||+ +|++++|++|+++|+.++...| .++|+
T Consensus 144 -~g~~~~lgrggsD~~A~~lA~~l~A~~l~i~TDVdGVyt~DP~~~~~a~~i~~i~~~e~~el~~~G------~~v~~-- 214 (587)
T PRK07431 144 -NLEITTLGRGGSDTSAVALAAALGADACEIYTDVPGVLTTDPRLVPEAQLMDEISCDEMLELASLG------ASVLH-- 214 (587)
T ss_pred -CCCEeecCCCchHHHHHHHHHHcCCCEEEEEeCCCccCcCCCCCCCCCeECCCcCHHHHHHHHhCC------CceEh--
Confidence 1111 27899999999999999999999999999999995 8999999999999999877644 56777
Q ss_pred HHHHHHHHHcCCcEEEEeCCCcchHHHHHcCCcceeEEecC
Q 005074 243 VNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRD 283 (715)
Q Consensus 243 l~aa~~a~~~gv~v~I~~g~~~~~l~~~~tg~~iGT~i~~~ 283 (715)
++++..+.++|+|++|.|++. +..||++...
T Consensus 215 ~~a~~~~~~~~i~i~i~~~~~----------~~~GT~i~~~ 245 (587)
T PRK07431 215 PRAVEIARNYGVPLVVRSSWS----------DAPGTLVTSP 245 (587)
T ss_pred HHHHHHHHHcCCcEEEecCCC----------CCCCeEEEeC
Confidence 589999999999999999872 1358888755
No 194
>COG0528 PyrH Uridylate kinase [Nucleotide transport and metabolism]
Probab=99.90 E-value=2.2e-22 Score=197.42 Aligned_cols=231 Identities=18% Similarity=0.225 Sum_probs=165.8
Q ss_pred cccceEEEEeCCcccccCCC-cccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhcccCCCcccccCccccc
Q 005074 12 KDVKRLVVKVGTAVVTRSDG-RLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNEL 90 (715)
Q Consensus 12 ~~~k~~VIKiGGs~l~~~~~-~~~~~~l~~l~~~I~~l~~~G~~vviVhGgg~~i~~~~l~~~~~~~~~~~~~~~~~~~l 90 (715)
.++|++|+|+||+.+...++ .++.+.+.+++++|+++.+.|+++.||.|||.-+-. ....+.+.. ....-.|
T Consensus 3 ~~~~rillkLsGe~l~g~~~~gid~~~i~~~a~~i~~~~~~g~eV~iVvGGGni~Rg-~~~~~~g~~----r~~~D~m-- 75 (238)
T COG0528 3 PKYMRILLKLSGEALAGEQGFGIDPEVLDRIANEIKELVDLGVEVAVVVGGGNIARG-YIGAAAGMD----RVTADYM-- 75 (238)
T ss_pred cceEEEEEEeecceecCCCCCCCCHHHHHHHHHHHHHHHhcCcEEEEEECCCHHHHh-HHHHHcCCc----hhhhhHH--
Confidence 34789999999999997665 578899999999999999999999999998774433 222222221 1111111
Q ss_pred hHHHHHHcchHHHHHHHHHHhhcCCCCcceEEecccccC-chhHHhHHHHHHHHHHhCCCeEEEeCCCceeccCCCCCCC
Q 005074 91 DGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFR-DEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDS 169 (715)
Q Consensus 91 ~~~~~~a~G~~~~~~l~~~~l~~~g~~~~~~~~~~~d~~-~~~~~~~~~~~i~~ll~~g~iPVv~g~d~v~~~~~~~~~~ 169 (715)
++.+-=. .. .++...|...|++.. +.+...+. -..++. .....+.+++|-|+|+.| . .
T Consensus 76 ---GmlaTvm-Na-l~L~~aL~~~~~~~~--v~sai~~~~~~e~~~--~~~A~~~l~~grVvIf~g-----G-------t 134 (238)
T COG0528 76 ---GMLATVM-NA-LALQDALERLGVDTR--VQSAIAMPQVAEPYS--RREAIRHLEKGRVVIFGG-----G-------T 134 (238)
T ss_pred ---HHHHHHH-HH-HHHHHHHHhcCCcce--ecccccCccccCccC--HHHHHHHHHcCCEEEEeC-----C-------C
Confidence 1111111 11 144567766776543 12211111 012221 234456799999999975 1 2
Q ss_pred CceeecchhHHHHHHhhcCCCEEEEecc-CCccccCCC-CCcCccccceeeccchhhHHhcCCCCCcccCChHHHHHHHH
Q 005074 170 SGIFWDNDSLAGLLALELKADLLVLLSD-VEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAY 247 (715)
Q Consensus 170 ~~~~~~~D~~A~~lA~~L~A~~li~lTD-VdGV~~~dP-~~p~a~~i~~is~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~ 247 (715)
+.++.++|++|+.+|+.++||.++..|+ |||||+.|| ++|||+++++||++|+.+.... ...+.|..
T Consensus 135 g~P~fTTDt~AALrA~ei~ad~ll~atn~VDGVY~~DPkk~pdA~~~~~Lty~e~l~~~l~-----------vmD~tA~~ 203 (238)
T COG0528 135 GNPGFTTDTAAALRAEEIEADVLLKATNKVDGVYDADPKKDPDAKKYDTLTYDEVLKIGLK-----------VMDPTAFS 203 (238)
T ss_pred CCCCCchHHHHHHHHHHhCCcEEEEeccCCCceeCCCCCCCCCceecccCCHHHHHHhcCe-----------eecHHHHH
Confidence 3446889999999999999999999995 999999999 5999999999999999753211 23457888
Q ss_pred HHHHcCCcEEEEeCCCcchHHHHHcCCcceeEEe
Q 005074 248 CAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFH 281 (715)
Q Consensus 248 ~a~~~gv~v~I~~g~~~~~l~~~~tg~~iGT~i~ 281 (715)
.+.+++++++++|.+.++++...+.|+..||.+.
T Consensus 204 l~~~~~i~i~Vfn~~~~~~l~~~~~ge~~gT~V~ 237 (238)
T COG0528 204 LARDNGIPIIVFNINKPGNLKRALKGEEVGTIVE 237 (238)
T ss_pred HHHHcCCcEEEEeCCCCccHHHHHcCCCCceEec
Confidence 8999999999999999999999999999999874
No 195
>PRK08373 aspartate kinase; Validated
Probab=99.90 E-value=1.2e-22 Score=215.94 Aligned_cols=226 Identities=22% Similarity=0.249 Sum_probs=165.4
Q ss_pred ccceEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhcccCC--------Cccc--
Q 005074 13 DVKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNS--------SLAD-- 82 (715)
Q Consensus 13 ~~k~~VIKiGGs~l~~~~~~~~~~~l~~l~~~I~~l~~~G~~vviVhGgg~~i~~~~l~~~~~~~~--------~~~~-- 82 (715)
+.+++|+|||||++.+ . +.++++.|... ..|.++++|+|+.+.+++.+++....... .+..
T Consensus 2 ~~~m~V~KFGGsSv~~-~-------~~~v~~ii~~~-~~~~~vvVVVSA~~gvTd~L~~l~~~~~~~~l~~i~~~h~~~~ 72 (341)
T PRK08373 2 VEKMIVVKFGGSSVRY-D-------FEEALELVKYL-SEENEVVVVVSALKGVTDKLLKLAETFDKEALEEIEEIHEEFA 72 (341)
T ss_pred CCCCEEEEECCcchHh-H-------HHHHHHHHHHH-hcCCCEEEEecCCchHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 4688999999999986 2 56777777643 45889999999988888876554322100 0000
Q ss_pred --c--c----------------CccccchHHHHHHcchHHHHHHHHHHhhcCCCCcc-----eEEecccccCchhH----
Q 005074 83 --L--Q----------------KPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSS-----QLLVTDSDFRDEDF---- 133 (715)
Q Consensus 83 --~--~----------------~~~~~l~~~~~~a~G~~~~~~l~~~~l~~~g~~~~-----~~~~~~~d~~~~~~---- 133 (715)
+ . .....-..+.+.+.|+..+..++...|...|+++. +++.+++++.+...
T Consensus 73 ~~L~~~~~~~~~~l~~~~~~~~~~~~~~~~D~ils~GE~lSa~lla~~L~~~Gi~a~~l~~~~~i~t~~~~~~a~i~~~~ 152 (341)
T PRK08373 73 KRLGIDLEILSPYLKKLFNSRPDLPSEALRDYILSFGERLSAVLFAEALENEGIKGKVVDPWEILEAKGSFGNAFIDIKK 152 (341)
T ss_pred HHhccchhhHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHCCCceEEEeHHHheeecCCccceeechhh
Confidence 0 0 00000112577899998888899999999998865 44566666655432
Q ss_pred HhHHHHHHHHHHhCCCeEEEeCCCceeccCCCCCCCCce--e--ecchhHHHHHHhhcCCCEEEEeccCCccccCCCC-C
Q 005074 134 RKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGI--F--WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-E 208 (715)
Q Consensus 134 ~~~~~~~i~~ll~~g~iPVv~g~d~v~~~~~~~~~~~~~--~--~~~D~~A~~lA~~L~A~~li~lTDVdGV~~~dP~-~ 208 (715)
...+.+.+..+++.|.|||++|+.. . .+|.. + ++||++|+.+|.+|+|++++|+|||||||++||+ .
T Consensus 153 s~~~~~~l~~~l~~g~VpVv~Gf~g--~------~~G~~ttLGRGGSD~tA~~lA~~L~A~~v~i~TDVdGVytaDP~~v 224 (341)
T PRK08373 153 SKRNVKILYELLERGRVPVVPGFIG--N------LNGFRATLGRGGSDYSAVALGVLLNAKAVLIMSDVEGIYTADPKLV 224 (341)
T ss_pred hhhhHHHHHHHHhCCcEEEEeCCcc--C------CCCeEEEcCCCchHHHHHHHHHHcCCCEEEEEECCCccCCCCCCCC
Confidence 1234578899999999999998432 1 12322 2 6999999999999999999999999999999995 8
Q ss_pred cCccccceeeccchhhHHhcCCCCCcccCChHHHHHHHHHHHHcCCcEEEEeCCCc
Q 005074 209 PNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAM 264 (715)
Q Consensus 209 p~a~~i~~is~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a~~~gv~v~I~~g~~~ 264 (715)
|++++|++|+++|+.++. ..||..+...|...++.++|++|.|.+.+
T Consensus 225 ~~A~~i~~isy~Ea~ela---------~~Gakvlhp~ai~~a~~~Ipi~v~~t~~~ 271 (341)
T PRK08373 225 PSARLIPYLSYDEALIAA---------KLGMKALHWKAIEPVKGKIPIIFGRTRDW 271 (341)
T ss_pred CCCeEcccCCHHHHHHHH---------HCcChhhhHHHHHHHHcCCcEEEecCCCC
Confidence 999999999999999754 35677777777766666999999997655
No 196
>TIGR00657 asp_kinases aspartate kinase. The Lys-sensitive enzyme of Bacillus subtilis resembles the E. coli form but is an alpha 2/beta 2 heterotetramer, where the beta subunit is translated from an in-phase alternative initiator at Met-246. This may be a feature of a number of closely related forms, including a paralog from B. subtilis.
Probab=99.90 E-value=7.7e-23 Score=228.69 Aligned_cols=239 Identities=22% Similarity=0.323 Sum_probs=178.2
Q ss_pred ceEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhcccCCCcc-----cccC----
Q 005074 15 KRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLA-----DLQK---- 85 (715)
Q Consensus 15 k~~VIKiGGs~l~~~~~~~~~~~l~~l~~~I~~l~~~G~~vviVhGgg~~i~~~~l~~~~~~~~~~~-----~~~~---- 85 (715)
+++|+||||+++.+.. .+.++++.|......|+++|+|||+++.+++.+++.......... .+..
T Consensus 1 ~~~V~KFGGssv~~~~------~~~~v~~~i~~~~~~~~~~vvVvSA~~~~Td~L~~~~~~~~~~~~~~~~~~i~~~~~~ 74 (441)
T TIGR00657 1 ALIVQKFGGTSVGNAE------RIRRVAKIVLKEKKKGNQVVVVVSAMAGVTDALVELAEQASPGPSKEFLEKIREKHIE 74 (441)
T ss_pred CCEEEEeCcccCCCHH------HHHHHHHHHHHHHhcCCCEEEEEcCCCCCHHHHHHHHHHHhcCCchHHHHHHHHHHHH
Confidence 3689999999999853 588999999988788999999999999898877544322110000 0000
Q ss_pred --------------------c--c--ccchHHHHHHcchHHHHHHHHHHhhcCCCCcceE------EecccccCchh-HH
Q 005074 86 --------------------P--Q--NELDGKACAAVGQSSLMALYDTLFSQLDVTSSQL------LVTDSDFRDED-FR 134 (715)
Q Consensus 86 --------------------~--~--~~l~~~~~~a~G~~~~~~l~~~~l~~~g~~~~~~------~~~~~d~~~~~-~~ 134 (715)
. + .....+.+.+.|+.....++...|...|+++..+ +++++++.+.. ..
T Consensus 75 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~ils~GE~~s~~l~~~~l~~~Gi~a~~l~~~~~~l~t~~~~~~~~~~~ 154 (441)
T TIGR00657 75 ILERLIPQAIAEELKRLLDAELVLEEKPREMDRILSFGERLSAALLSAALEELGVKAVSLLGGEAGILTDSNFGRARVII 154 (441)
T ss_pred HHHHhhhHHHHHHHHHHHHHHHhhhcCcchHhheecHHHHHHHHHHHHHHHhCCCCCEEEEcCcceEEecCCCCceeecH
Confidence 0 0 0001234557787666667889999999876543 45555555443 34
Q ss_pred hHHHHHHHHHHhCCCeEEEeCCCceeccCCCCCCCCcee----ecchhHHHHHHhhcCCCEEEEeccCCccccCCCC-Cc
Q 005074 135 KQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIF----WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EP 209 (715)
Q Consensus 135 ~~~~~~i~~ll~~g~iPVv~g~d~v~~~~~~~~~~~~~~----~~~D~~A~~lA~~L~A~~li~lTDVdGV~~~dP~-~p 209 (715)
..+.+.|..+++.|.|||++|+.+... .+... +++|++|+.+|.+|+|++|+++|||||||++||+ .|
T Consensus 155 ~~~~~~l~~~l~~~~vpVv~G~~g~~~-------~g~~~~lgrggsD~~A~~lA~~l~a~~l~~~tDV~Gv~~~DP~~~~ 227 (441)
T TIGR00657 155 EILTERLEPLLEEGIIPVVAGFQGATE-------KGETTTLGRGGSDYTAALLAAALKADECEIYTDVDGIYTTDPRIVP 227 (441)
T ss_pred hhhHHHHHHHHhcCCEEEEeCcEeeCC-------CCCEeecCCCchHHHHHHHHHHcCCCEEEEEECCCCCCcCCCCCCC
Confidence 456789999999999999998422221 22221 5899999999999999999999999999999995 89
Q ss_pred CccccceeeccchhhHHhcCCCCCcccCChHHHHHHHHHHHHcCCcEEEEeCCCcchHHHHHcCCcceeEEecC
Q 005074 210 NSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRD 283 (715)
Q Consensus 210 ~a~~i~~is~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a~~~gv~v~I~~g~~~~~l~~~~tg~~iGT~i~~~ 283 (715)
++++|++|+++|+.++...| .+..+.+++..+.++++|++|.|++.|+ ..||++...
T Consensus 228 ~a~~i~~is~~ea~el~~~G--------~~v~~~~a~~~~~~~~i~i~i~~~~~~~---------~~GT~I~~~ 284 (441)
T TIGR00657 228 DARRIDEISYEEMLELASFG--------AKVLHPRTLEPAMRAKIPIVVKSTFNPE---------APGTLIVAS 284 (441)
T ss_pred CCeECCccCHHHHHHHHhcC--------CcccCHHHHHHHHHcCCeEEEecCCCCC---------CCceEEEeC
Confidence 99999999999999877643 3567778999999999999999998763 358998765
No 197
>cd04244 AAK_AK-LysC-like AAK_AK-LysC-like: Amino Acid Kinase Superfamily (AAK), AK-LysC-like; this CD includes the N-terminal catalytic aspartokinase (AK) domain of the lysine-sensitive AK isoenzyme found in higher plants. The lysine-sensitive AK isoenzyme is a monofunctional protein. It is involved in the overall regulation of the aspartate pathway and can be synergistically inhibited by S-adenosylmethionine. Also included in this CD is an uncharacterized LysC-like AK found in Euryarchaeota and some bacteria. AK catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP.
Probab=99.90 E-value=1.8e-22 Score=212.62 Aligned_cols=228 Identities=20% Similarity=0.312 Sum_probs=165.9
Q ss_pred eEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhcccCC----Cccc---------
Q 005074 16 RLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNS----SLAD--------- 82 (715)
Q Consensus 16 ~~VIKiGGs~l~~~~~~~~~~~l~~l~~~I~~l~~~G~~vviVhGgg~~i~~~~l~~~~~~~~----~~~~--------- 82 (715)
++|.||||+++.+. +++.++++.|... ..++++|+|+|+.+.+++.++........ .+..
T Consensus 1 ~~V~KFGGtSv~~~------~~~~~v~~iI~~~-~~~~~~vvVvSA~~~iTd~L~~~~~~~~~~~~~~~~~~l~~i~~~h 73 (298)
T cd04244 1 RLVMKFGGTSVGSA------ERIRHVADLVGTY-AEGHEVVVVVSAMGGVTDRLLLAAEAAVSGRIAGVKDFIEILRLRH 73 (298)
T ss_pred CEEEEECcccCCCH------HHHHHHHHHHHHh-hcCCCEEEEEeCCCCcHHHHHHHHHHHhcCCchhHHHHHHHHHHHH
Confidence 47999999999975 3688888888766 45789999999988888876543321100 0000
Q ss_pred ------c--cCcc---------------------------ccchHHHHHHcchHHHHHHHHHHhhcCCCCcceE------
Q 005074 83 ------L--QKPQ---------------------------NELDGKACAAVGQSSLMALYDTLFSQLDVTSSQL------ 121 (715)
Q Consensus 83 ------~--~~~~---------------------------~~l~~~~~~a~G~~~~~~l~~~~l~~~g~~~~~~------ 121 (715)
+ +..+ ..-..+.+.+.|+..+..++...|+..|+++..+
T Consensus 74 ~~~~~~l~~~~~~~~~~~~i~~~~~~l~~~~~~~~~~~~~~~~~~d~i~s~GE~lSa~lla~~L~~~Gi~a~~l~~~~~~ 153 (298)
T cd04244 74 IKAAKEAISDEEIAEVESIIDSLLEELEKLLYGIAYLGELTPRSRDYIVSFGERLSAPIFSAALRSLGIKARALDGGEAG 153 (298)
T ss_pred HHHHHHhhcchhhHHHHHHHHHHHHHHHHHHHHHHhhhcCCchHhhHhccHhHHHHHHHHHHHHHhCCCCeEEEcHHHcc
Confidence 0 0000 0001245667888877778889999999876533
Q ss_pred EecccccCchh----HHhHHHHHHHHHHhCCCeEEEeCCCceeccCCCCCCCCce--e--ecchhHHHHHHhhcCCCEEE
Q 005074 122 LVTDSDFRDED----FRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGI--F--WDNDSLAGLLALELKADLLV 193 (715)
Q Consensus 122 ~~~~~d~~~~~----~~~~~~~~i~~ll~~g~iPVv~g~d~v~~~~~~~~~~~~~--~--~~~D~~A~~lA~~L~A~~li 193 (715)
+++++++.+.. .+......+..+++.|.|||++|+-+. +..+.. + +++|++|+.+|.+|+|++++
T Consensus 154 i~t~~~~~~a~~~~~~~~~i~~~l~~ll~~~~vpVv~Gfig~-------~~~g~~ttlgRggsD~~A~~~A~~l~a~~l~ 226 (298)
T cd04244 154 IITDDNFGNARPLPATYERVRKRLLPMLEDGKIPVVTGFIGA-------TEDGAITTLGRGGSDYSATIIGAALDADEIW 226 (298)
T ss_pred eeecCcccccccchhHHHHHHHHHHHHhhcCCEEEEeCcccc-------CCCCCEEEecCCChHHHHHHHHHHcCCCEEE
Confidence 45555554322 122223456678899999999883221 113332 2 79999999999999999999
Q ss_pred EeccCCccccCCCC-CcCccccceeeccchhhHHhcCCCCCcccCChHHHHHHHHHHHHcCCcEEEEeCCCcc
Q 005074 194 LLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMD 265 (715)
Q Consensus 194 ~lTDVdGV~~~dP~-~p~a~~i~~is~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a~~~gv~v~I~~g~~~~ 265 (715)
++|||||||+.||+ +|++++|++|+++|+.++... |.+.-+++++..+.++|||++|.|++.|+
T Consensus 227 i~tdV~Gv~~~dP~~~~~a~~i~~lsy~Ea~el~~~--------Ga~vlhp~ai~~a~~~~Ipi~i~n~~~p~ 291 (298)
T cd04244 227 IWKDVDGVMTADPRIVPEARTIPRLSYAEAMELAYF--------GAKVLHPRTVEPAMEKGIPVRVKNTFNPE 291 (298)
T ss_pred EEECCCCCCCCCCCCCCCCeEcCccCHHHHHHHHhC--------CCcccCHHHHHHHHHcCCcEEEeeCCCCC
Confidence 99999999999995 899999999999999987764 45677889999999999999999998875
No 198
>TIGR02078 AspKin_pair Pyrococcus aspartate kinase subunit, putative. This family consists of proteins restricted to and found as paralogous pairs (typically close together) in species of Pyrococcus, a hyperthermophilic archaeal genus. Members are always found close to other genes of threonine biosynthesis and appear to represent the Pyrococcal form of aspartate kinase. Alignment to aspartokinase III from E. coli shows that 300 N-terminal and 20 C-terminal amino acids are homologous, but the form in Pyrococcus lacks ~ 100 amino acids in between.
Probab=99.88 E-value=1.9e-22 Score=213.28 Aligned_cols=232 Identities=22% Similarity=0.275 Sum_probs=163.3
Q ss_pred eEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhcccC--------CCccc----c
Q 005074 16 RLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVN--------SSLAD----L 83 (715)
Q Consensus 16 ~~VIKiGGs~l~~~~~~~~~~~l~~l~~~I~~l~~~G~~vviVhGgg~~i~~~~l~~~~~~~--------~~~~~----~ 83 (715)
|+|+|||||++.+. ++++++.|.... ++.++++|+|+...+++.++....... ..+.. +
T Consensus 1 m~V~KFGGsSv~~~--------~~~v~~ii~~~~-~~~~~vVVVSA~~gvTd~L~~~~~~~~~~~l~~i~~~h~~~~~~L 71 (327)
T TIGR02078 1 MIVVKFGGSSVRYA--------FEEALELVKSLS-EEKRVIVVVSALKGITDCLIRYANTFDKSAALEIEEIYEEFAKEL 71 (327)
T ss_pred CEEEEECCcchHHH--------HHHHHHHHHHHh-cCCCEEEEeCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 47999999999962 667777776544 367899999998888877654332110 00000 0
Q ss_pred cC---------------cc--ccchHHHHHHcchHHHHHHHHHHhhcCCCCcceEEecccccCchhH----HhHHHHHHH
Q 005074 84 QK---------------PQ--NELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDF----RKQLYDTVQ 142 (715)
Q Consensus 84 ~~---------------~~--~~l~~~~~~a~G~~~~~~l~~~~l~~~g~~~~~~~~~~~d~~~~~~----~~~~~~~i~ 142 (715)
.. .. .....+.+.++|+..+..++...+.+..+++.+++.+++++.+... ...+.+.+.
T Consensus 72 ~~~~~~~~~~l~~~~~~~~l~~~~~~d~I~s~GE~lSa~Lla~gi~a~~vd~~~~i~t~~~~~~a~~~~~~~~~~~~~l~ 151 (327)
T TIGR02078 72 GVDLNILSPYLKELFNPPDLPKEALRDYILSLGERLSAVIFAEGINGKVVDPWDIFFAKGDFGNAFIDIKKSKRNAKILY 151 (327)
T ss_pred ccchhhhHHHHHHHHhhhccCChHHHHHHHHHHHHHHHHHHHccCCcEEEcHHHHhccCCcCCceeechhhhHhhHHHHH
Confidence 00 00 0011246677777766656666665555666666777776665322 223457788
Q ss_pred HHHhCCCeEEEeCCCceeccCCCCCCCCce--e--ecchhHHHHHHhhcCCCEEEEeccCCccccCCCC-CcCcccccee
Q 005074 143 SLLDLRVIPIFNENDAVSTRKAPYEDSSGI--F--WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTY 217 (715)
Q Consensus 143 ~ll~~g~iPVv~g~d~v~~~~~~~~~~~~~--~--~~~D~~A~~lA~~L~A~~li~lTDVdGV~~~dP~-~p~a~~i~~i 217 (715)
.+++.|.|||++|+.. . .+|.. + +++|++|+.+|.+|+|+.++++|||||||++||+ +|++++|+++
T Consensus 152 ~~l~~g~IpVv~Gf~~--~------~~G~~ttlGRGgSD~~Aa~lA~~L~A~~v~i~TDVdGVytaDP~~v~~A~~i~~l 223 (327)
T TIGR02078 152 EVLESGKIPVIPGFYG--N------LNGYRVTLGRGGSDYSAVALGVLLNSKLVAIMSDVEGIFTADPKLVPSARLIPYL 223 (327)
T ss_pred HHHhCCcEEEEeCCcc--C------CCCeEEEcCCCChHHHHHHHHHhcCCCEEEEEECCCccCCCCCCcCCCceEcccc
Confidence 8999999999998422 1 12322 2 6899999999999999999999999999999995 8999999999
Q ss_pred eccchhhHHhcCCCCCcccCChH-HHHHHHHHHHHcCCcEEEEeCCCcchHHHHHcCCcceeEEecC
Q 005074 218 IRAKHQAEITFGDKSRVGRGGMT-AKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRD 283 (715)
Q Consensus 218 s~~e~~~~~~~g~~~~~~~ggM~-~Kl~aa~~a~~~gv~v~I~~g~~~~~l~~~~tg~~iGT~i~~~ 283 (715)
+++|+.++.. .||. .|+.++..+.++|+|++|.|.+.|+ .||++...
T Consensus 224 sy~Ea~ela~---------~Gakvlhp~a~~~a~~~~Ipi~I~~t~~~~----------~GT~I~~~ 271 (327)
T TIGR02078 224 SYEEIKIAAK---------LGMKALQWKAADLAKEYKIPVLFGRTRDWR----------MGTLISNR 271 (327)
T ss_pred CHHHHHHHHH---------CCchhhHHHHHHHHHHCCCeEEEEeCCCcC----------CCcEEecC
Confidence 9999986543 3553 6889999999999999999987652 47777543
No 199
>cd04245 AAK_AKiii-YclM-BS AAK_AKiii-YclM-BS: Amino Acid Kinase Superfamily (AAK), AKiii-YclM-BS; this CD includes the N-terminal catalytic aspartokinase (AK) domain of the lysine plus threonine-sensitive aspartokinase isoenzyme AKIII, a monofunctional class enzyme found in Bacilli (Bacillus subtilis YclM) and Clostridia species. Aspartokinase is the first enzyme in the aspartate metabolic pathway and catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP. In Bacillus subtilis (BS), YclM is reported to be a single polypeptide of 50 kD. The Bacillus subtilis 168 AKIII is induced by lysine and repressed by threonine, and it is synergistically inhibited by lysine and threonine.
Probab=99.88 E-value=9.5e-22 Score=205.16 Aligned_cols=226 Identities=20% Similarity=0.206 Sum_probs=163.3
Q ss_pred eEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCChh-------HhhHHHhhhhcccCCC--ccc----
Q 005074 16 RLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAV-------GVGRQRLRYRKLVNSS--LAD---- 82 (715)
Q Consensus 16 ~~VIKiGGs~l~~~~~~~~~~~l~~l~~~I~~l~~~G~~vviVhGgg~-------~i~~~~l~~~~~~~~~--~~~---- 82 (715)
|.|.||||+++.+.+ +++++++.|.. .+.++++|+|+.+ .+++.++........+ +..
T Consensus 1 m~V~KFGGtSv~~~~------~i~~v~~ii~~---~~~~~vvVvSA~~~~~~~~~~vTd~L~~~~~~~~~~~~~~~~~~~ 71 (288)
T cd04245 1 MKVVKFGGSSLASAE------QFQKVKAIVKA---DPERKIVVVSAPGKRFKDDTKVTDLLILYAEAVLAGEDTESIFEA 71 (288)
T ss_pred CEEEEECcCccCCHH------HHHHHHHHHHh---cCCCEEEEEcCCCCCCCchhhHHHHHHHHHHHHhcCcchHHHHHH
Confidence 359999999999854 57777777653 3568999999865 4776654322110000 000
Q ss_pred c----------------------------cC---ccccchHHHHHHcchHHHHHHHHHHhhcCCCCcceE------Eecc
Q 005074 83 L----------------------------QK---PQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQL------LVTD 125 (715)
Q Consensus 83 ~----------------------------~~---~~~~l~~~~~~a~G~~~~~~l~~~~l~~~g~~~~~~------~~~~ 125 (715)
+ .. .......+.+.+.|+.....++...|+..|+++..+ ++++
T Consensus 72 i~~~h~~~~~~L~~~~~~~~~i~~~~~~l~~~~~~~~~~~~d~i~s~GE~lSa~ll~~~L~~~Gi~a~~ld~~~~~i~t~ 151 (288)
T cd04245 72 IVDRYAEIADELGLPMSILEEIAEILENLANLDYANPDYLLDALKARGEYLNAQLMAAYLNYQGIDARYVIPKDAGLVVT 151 (288)
T ss_pred HHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHhhccCCHHHHHHHHHHhHHHHHHHHHHHHHHCCCCeEEEcHHHCceeec
Confidence 0 00 000112256778898888788899999999886533 4566
Q ss_pred cccCchhHHhHHHHHHHHHHhCCCeEEEeCCCceeccCCCCCCCCce--e--ecchhHHHHHHhhcCCCEEEEeccCCcc
Q 005074 126 SDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGI--F--WDNDSLAGLLALELKADLLVLLSDVEGL 201 (715)
Q Consensus 126 ~d~~~~~~~~~~~~~i~~ll~~g~iPVv~g~d~v~~~~~~~~~~~~~--~--~~~D~~A~~lA~~L~A~~li~lTDVdGV 201 (715)
+++.+........+.+.++++.+.|||++|+.+... .|.. + +++|+.|+.+|.+|+|+.+.++||||||
T Consensus 152 ~~~~~a~~~~~~~~~~~~~~~~~~v~Vv~Gf~g~~~-------~G~~ttLgRggSD~tAal~A~~l~A~~v~i~tdVdGv 224 (288)
T cd04245 152 DEPGNAQILPESYQKIKKLRDSDEKLVIPGFYGYSK-------NGDIKTFSRGGSDITGAILARGFQADLYENFTDVDGI 224 (288)
T ss_pred CCccccccchhhHHHHHHHHhCCCEEEEeCccccCC-------CCCEEEcCCCchHHHHHHHHHHcCCCEEEEEeCCCce
Confidence 667655443334577888888899999998433222 2222 2 7999999999999999999999999999
Q ss_pred ccCCCC-CcCccccceeeccchhhHHhcCCCCCcccCChHHHHHHHHHHHHcCCcEEEEeCCCcc
Q 005074 202 YSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMD 265 (715)
Q Consensus 202 ~~~dP~-~p~a~~i~~is~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a~~~gv~v~I~~g~~~~ 265 (715)
|++||+ +|+++.|++|||+|+.++..+| ..-|+| .+...+.++++|++|.|.+.|+
T Consensus 225 ytaDPr~v~~A~~i~~lsy~EA~ela~~G------akVlhp--~ai~~a~~~~Ipi~v~n~~~p~ 281 (288)
T cd04245 225 YAANPRIVANPKPISEMTYREMRELSYAG------FSVFHD--EALIPAIEAGIPINIKNTNHPE 281 (288)
T ss_pred ECCCCCCCCCCeEeCccCHHHHHHHHHCC------CcccCH--HHHHHHHHCCCcEEEeeCCCCC
Confidence 999995 8999999999999999987765 344566 5888999999999999988775
No 200
>cd04259 AAK_AK-DapDC AAK_AK-DapDC: Amino Acid Kinase Superfamily (AAK), AK-DapDC; this CD includes the N-terminal catalytic aspartokinase (AK) domain of the bifunctional enzyme AK - DAP decarboxylase (DapDC) found in some bacteria. Aspartokinase is the first enzyme in the aspartate metabolic pathway, catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP. DapDC, which is the lysA gene product, catalyzes the decarboxylation of DAP to lysine.
Probab=99.88 E-value=7.1e-22 Score=207.28 Aligned_cols=229 Identities=18% Similarity=0.173 Sum_probs=165.3
Q ss_pred eEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhcccCC-Cc----cccc------
Q 005074 16 RLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNS-SL----ADLQ------ 84 (715)
Q Consensus 16 ~~VIKiGGs~l~~~~~~~~~~~l~~l~~~I~~l~~~G~~vviVhGgg~~i~~~~l~~~~~~~~-~~----~~~~------ 84 (715)
++|.||||+++.+.+ .++++++.|..-.+.+.++++|.|+.+.+++.+++....... .+ ..+.
T Consensus 1 ~~V~KFGGtSv~~~~------~~~~v~~ii~~~~~~~~~~vVVVSA~~gvTd~L~~~~~~a~~~~~~~~l~~i~~~~~~~ 74 (295)
T cd04259 1 WVVLKFGGTSVSSRA------RWDTIAKLAQKHLNTGGQPLIVCSALSGISNKLEALIDQALLDEHHSLFNAIQSRHLNL 74 (295)
T ss_pred CEEEEeCccccCCHH------HHHHHHHHHHHHhhcCCCEEEEEeCCCCCchHHHHHHHHHhccChHHHHHHHHHHHHHH
Confidence 469999999999854 588888888765566778999999988787765433211000 00 0000
Q ss_pred -------C--------------------cc--ccchHHHHHHcchHHHHHHHHHHhhcCCCCcc-----eEEecccccCc
Q 005074 85 -------K--------------------PQ--NELDGKACAAVGQSSLMALYDTLFSQLDVTSS-----QLLVTDSDFRD 130 (715)
Q Consensus 85 -------~--------------------~~--~~l~~~~~~a~G~~~~~~l~~~~l~~~g~~~~-----~~~~~~~d~~~ 130 (715)
. .. ..-..+.+.+.|+..+..++...|+..|+++. ++++++.++.+
T Consensus 75 ~~~L~~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~~~d~i~s~GE~lSa~lla~~L~~~Gi~a~~ld~~~~i~~~~~~~~ 154 (295)
T cd04259 75 AEQLEVDADALLANDLAQLQRWLTGISLLKQASPRTRAEVLALGELMSTRLGAAYLEAQGLKVKWLDARELLTATPTLGG 154 (295)
T ss_pred HHHhhhhhhhHHHHHHHHHHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEcHHHheeecccccc
Confidence 0 00 00012467789988888889999999998865 33455555532
Q ss_pred h-------hH-HhHHHHHHHHHHhC-CCeEEEeCCCceeccCCCCCCCCce--e--ecchhHHHHHHhhcCCCEEEEecc
Q 005074 131 E-------DF-RKQLYDTVQSLLDL-RVIPIFNENDAVSTRKAPYEDSSGI--F--WDNDSLAGLLALELKADLLVLLSD 197 (715)
Q Consensus 131 ~-------~~-~~~~~~~i~~ll~~-g~iPVv~g~d~v~~~~~~~~~~~~~--~--~~~D~~A~~lA~~L~A~~li~lTD 197 (715)
. .. .....+.|.+.++. +.|||++|+.+... .|.. + +++|++|+.+|.+|+|+.++++||
T Consensus 155 ~~~~~~~a~v~~~~~~~~l~~~l~~~~~v~Vv~GFig~~~-------~G~~ttLGrggsD~tA~~lA~~l~A~~l~i~Td 227 (295)
T cd04259 155 ETMNYLSARCESEYADALLQKRLADGAQLIITQGFIARNA-------HGETVLLGRGGSDTSAAYFAAKLQAARCEIWTD 227 (295)
T ss_pred cccccccceehhhhhHHHHHHHHhcCCceeEeCCceeeCC-------CCCEEEECCCChHHHHHHHHHHcCCCEEEEEEC
Confidence 1 11 11223566666665 67999998533322 2322 3 899999999999999999999999
Q ss_pred CCccccCCCC-CcCccccceeeccchhhHHhcCCCCCcccCChHHHHHHHHHHHHcCCcEEEEeCCCcc
Q 005074 198 VEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMD 265 (715)
Q Consensus 198 VdGV~~~dP~-~p~a~~i~~is~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a~~~gv~v~I~~g~~~~ 265 (715)
|||||+.||+ +|++++|++|+++|+.++... |++..|++++..+.++|+|++|.|++.|+
T Consensus 228 V~Gvyt~DP~~~~~a~~i~~ls~~ea~~l~~~--------Ga~v~h~~a~~~a~~~~ipi~i~~~~~p~ 288 (295)
T cd04259 228 VPGLFTANPHEVPHARLLKRLDYDEAQEIATM--------GAKVLHPRCIPPARRANIPMVVRSTERPE 288 (295)
T ss_pred CCccccCCCCCCCCCeEeceeCHHHHHHHHHc--------CCcccCHHHHHHHHHCCCCEEEEeCCCCC
Confidence 9999999995 899999999999999987763 56788889999999999999999998874
No 201
>cd04257 AAK_AK-HSDH AAK_AK-HSDH: Amino Acid Kinase Superfamily (AAK), AK-HSDH; this CD includes the N-terminal catalytic domain of aspartokinase (AK) of the bifunctional enzyme AK - homoserine dehydrogenase (HSDH). These aspartokinases are found in bacteria (E. coli AKI-HSDHI, ThrA and E. coli AKII-HSDHII, MetL) and higher plants (Z. mays AK-HSDH). AK and HSDH are the first and third enzymes in the biosynthetic pathway of the aspartate family of amino acids. AK catalyzes the phosphorylation of Asp to P-aspartyl phosphate. HSDH catalyzes the NADPH-dependent conversion of Asp 3-semialdehyde to homoserine. ThrA and MetL are involved in threonine and methionine biosynthesis, respectively. In E. coli, ThrA is subject to allosteric regulation by the end product L-threonine and the native enzyme is reported to be tetrameric. As with bacteria, plant AK and HSDH are feedback inhibited by pathway end products. Maize AK-HSDH is a Thr-sensitive 180-kD enzyme. Arabidopsis AK-HSDH is an alanine-act
Probab=99.88 E-value=7.2e-22 Score=207.34 Aligned_cols=228 Identities=18% Similarity=0.248 Sum_probs=164.3
Q ss_pred eEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhcccCCC---cc----c------
Q 005074 16 RLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSS---LA----D------ 82 (715)
Q Consensus 16 ~~VIKiGGs~l~~~~~~~~~~~l~~l~~~I~~l~~~G~~vviVhGgg~~i~~~~l~~~~~~~~~---~~----~------ 82 (715)
|.|.||||+++.+.+ ++.++++.|.... ++.++++|+|+.+.+++.++......... .. .
T Consensus 1 m~V~KFGGtSv~~~~------~i~~v~~iI~~~~-~~~~~vvVvSA~~gvTd~L~~~~~~~~~~~~~~~~~l~~i~~~h~ 73 (294)
T cd04257 1 MKVLKFGGTSLANAE------RIRRVADIILNAA-KQEQVAVVVSAPGKVTDLLLELAELASSGDDAYEDILQELESKHL 73 (294)
T ss_pred CEEEEeCccccCCHH------HHHHHHHHHHhhc-cCCCEEEEEcCCCCcHHHHHHHHHHHhcCChhHHHHHHHHHHHHH
Confidence 369999999999754 5888888887654 46789999999888888765433211000 00 0
Q ss_pred -----c-c-Ccc---------------------------ccchHHHHHHcchHHHHHHHHHHhhcCCCCcc-----eEEe
Q 005074 83 -----L-Q-KPQ---------------------------NELDGKACAAVGQSSLMALYDTLFSQLDVTSS-----QLLV 123 (715)
Q Consensus 83 -----~-~-~~~---------------------------~~l~~~~~~a~G~~~~~~l~~~~l~~~g~~~~-----~~~~ 123 (715)
+ . ..+ .....+.+.+.|+..+..++...|+..|+++. +++.
T Consensus 74 ~~~~~l~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~~~d~ils~GE~lSa~lla~~L~~~Gi~a~~ld~~~~i~ 153 (294)
T cd04257 74 DLITELLSGDAAAELLSALGNDLEELKDLLEGIYLLGELPDSIRAKVLSFGERLSARLLSALLNQQGLDAAWIDARELIV 153 (294)
T ss_pred HHHHHhhcchhhHHHHHHHHHHHHHHHHHHHHHHhhccCChhHhhhheeHHHHHHHHHHHHHHHhCCCCeEEEchHHeeE
Confidence 0 0 000 00111456678888888889999999998764 3466
Q ss_pred cccccCchhHHh-HHHHHHHHHHhC-CCeEEEeCCCceeccCCCCCCCCce--e--ecchhHHHHHHhhcCCCEEEEecc
Q 005074 124 TDSDFRDEDFRK-QLYDTVQSLLDL-RVIPIFNENDAVSTRKAPYEDSSGI--F--WDNDSLAGLLALELKADLLVLLSD 197 (715)
Q Consensus 124 ~~~d~~~~~~~~-~~~~~i~~ll~~-g~iPVv~g~d~v~~~~~~~~~~~~~--~--~~~D~~A~~lA~~L~A~~li~lTD 197 (715)
+++++.+..+.. ...+.+..+++. +.|||++|+.+... .|.. + ++||++|+.+|.+|+|+.++++||
T Consensus 154 t~~~~~~a~~~~~~~~~~l~~~~~~~~~v~Vv~Gfig~~~-------~G~~ttlGRGGSD~~A~~lA~~l~a~~l~i~td 226 (294)
T cd04257 154 TDGGYLNAVVDIELSKERIKAWFSSNGKVIVVTGFIASNP-------QGETTTLGRNGSDYSAAILAALLDADQVEIWTD 226 (294)
T ss_pred ecCCCCceEechHhhHHHHHHHHhcCCCEEEecCcccCCC-------CCCEEECCCCchHHHHHHHHHHhCCCEEEEEeC
Confidence 776666544422 224677777776 89999998533211 2322 3 889999999999999999999999
Q ss_pred CCccccCCCC-CcCccccceeeccchhhHHhcCCCCCcccCChHHHHHHHHHHHHcCCcEEEEeCCCcc
Q 005074 198 VEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMD 265 (715)
Q Consensus 198 VdGV~~~dP~-~p~a~~i~~is~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a~~~gv~v~I~~g~~~~ 265 (715)
|||||+.||+ +|++++|++|+++|+.++...|+ .-+.| ++...+.++|||++|.|++.|+
T Consensus 227 VdGvyt~DP~~~~~A~~i~~is~~ea~~l~~~Ga------kv~h~--~~~~~a~~~~Ipi~i~~~~~p~ 287 (294)
T cd04257 227 VDGVYSADPRKVKDARLLPSLSYQEAMELSYFGA------KVLHP--KTIQPVAKKNIPILIKNTFNPE 287 (294)
T ss_pred CCccCCCCCCCCCCCeEeceeCHHHHHHHHhCCC------cccCH--HHHHHHHHCCCCEEEeeCCCCC
Confidence 9999999995 89999999999999998766553 23333 6777899999999999998874
No 202
>cd04243 AAK_AK-HSDH-like AAK_AK-HSDH-like: Amino Acid Kinase Superfamily (AAK), AK-HSDH-like; this family includes the N-terminal catalytic domain of aspartokinase (AK) of the bifunctional enzyme AK- homoserine dehydrogenase (HSDH). These aspartokinases are found in such bacteria as E. coli (AKI-HSDHI, ThrA and AKII-HSDHII, MetL) and in higher plants (Z. mays AK-HSDH). AK and HSDH are the first and third enzymes in the biosynthetic pathway of the aspartate family of amino acids. AK catalyzes the phosphorylation of Asp to P-aspartyl phosphate. HSDH catalyzes the NADPH-dependent conversion of Asp 3-semialdehyde to homoserine. ThrA and MetL are involved in threonine and methionine biosynthesis, respectively. In E. coli, ThrA is subject to allosteric regulation by the end product L-threonine and the native enzyme is reported to be tetrameric. As with bacteria, plant AK and HSDH are feedback inhibited by pathway end products. Maize AK-HSDH is a Thr-sensitive 180-kD enzyme. Arabidopsis AK-
Probab=99.88 E-value=8.1e-22 Score=206.84 Aligned_cols=227 Identities=20% Similarity=0.282 Sum_probs=163.2
Q ss_pred eEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhcccCCC-------ccc------
Q 005074 16 RLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSS-------LAD------ 82 (715)
Q Consensus 16 ~~VIKiGGs~l~~~~~~~~~~~l~~l~~~I~~l~~~G~~vviVhGgg~~i~~~~l~~~~~~~~~-------~~~------ 82 (715)
|.|+||||+++.+. +++.++++.|..-. +.++++|+|+.+.+++.++......... +..
T Consensus 1 m~V~KFGGtSv~~~------~~i~~v~~iI~~~~--~~~~vvVvSA~~gvTd~L~~~~~~a~~~~~~~~~~l~~i~~~h~ 72 (293)
T cd04243 1 MKVLKFGGTSVASA------ERIRRVADIIKSRA--SSPVLVVVSALGGVTNRLVALAELAASGDDAQAIVLQEIRERHL 72 (293)
T ss_pred CEEEEECccccCCH------HHHHHHHHHHHHhc--CCCEEEEEcCCCCcHHHHHHHHHHHhcCChhHHHHHHHHHHHHH
Confidence 47999999999974 35778777776443 6789999999888887764433211000 000
Q ss_pred -----c--cCc---------------c------------ccchHHHHHHcchHHHHHHHHHHhhcCCCCcc-----eEEe
Q 005074 83 -----L--QKP---------------Q------------NELDGKACAAVGQSSLMALYDTLFSQLDVTSS-----QLLV 123 (715)
Q Consensus 83 -----~--~~~---------------~------------~~l~~~~~~a~G~~~~~~l~~~~l~~~g~~~~-----~~~~ 123 (715)
+ ... . .....+.+.+.|+..+..++...|+..|+++. +++.
T Consensus 73 ~~~~~L~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~~s~~~~d~ils~GE~lSa~lla~~L~~~Gi~a~~ld~~~~i~ 152 (293)
T cd04243 73 DLIKELLSGESAAELLAALDSLLERLKDLLEGIRLLGELSDKTRAEVLSFGELLSSRLMSAYLQEQGLPAAWLDARELLL 152 (293)
T ss_pred HHHHHhhcchhhHHHHHHHHHHHHHHHHHHHhhhhhccCCchhhhHheeHHHHHHHHHHHHHHHhCCCCcEEEcHHHeEE
Confidence 0 000 0 00112456688888888888999999998765 3456
Q ss_pred cccccCchhHHhH-HHHHHHHHHhC-CCeEEEeCCCceeccCCCCCCCCce--e--ecchhHHHHHHhhcCCCEEEEecc
Q 005074 124 TDSDFRDEDFRKQ-LYDTVQSLLDL-RVIPIFNENDAVSTRKAPYEDSSGI--F--WDNDSLAGLLALELKADLLVLLSD 197 (715)
Q Consensus 124 ~~~d~~~~~~~~~-~~~~i~~ll~~-g~iPVv~g~d~v~~~~~~~~~~~~~--~--~~~D~~A~~lA~~L~A~~li~lTD 197 (715)
+++++.+...... ..+.++.+++. +.|||++|+-+... .|.. + +++|++|+.+|.+|+|++++++||
T Consensus 153 t~~~~~~~~~~~~~s~~~~~~~~~~~~~v~Vv~Gfig~~~-------~G~~ttLGRggsD~~A~~~a~~l~a~~~~i~td 225 (293)
T cd04243 153 TDDGFLNAVVDLKLSKERLAQLLAEHGKVVVTQGFIASNE-------DGETTTLGRGGSDYSAALLAALLDAEEVEIWTD 225 (293)
T ss_pred ecCCCCcchhhhHHHHHHHHHHHhcCCCEEEecCccccCC-------CCCEEEeCCCCcHHHHHHHHHHcCCCEEEEEeC
Confidence 6665554443222 24678888887 89999998533221 2322 3 788999999999999999999999
Q ss_pred CCccccCCCC-CcCccccceeeccchhhHHhcCCCCCcccCChHHHHHHHHHHHHcCCcEEEEeCCCcc
Q 005074 198 VEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMD 265 (715)
Q Consensus 198 VdGV~~~dP~-~p~a~~i~~is~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a~~~gv~v~I~~g~~~~ 265 (715)
|||||++||+ +|++++|++|+++|+.++...|++ -|. ..+...+.++|+|++|.|++.|+
T Consensus 226 vdGiyt~dP~~~~~a~~i~~ls~~ea~~l~~~Gak------vl~--p~ai~~a~~~~i~i~i~~~~~p~ 286 (293)
T cd04243 226 VDGVYTADPRKVPDARLLKELSYDEAMELAYFGAK------VLH--PRTIQPAIRKNIPIFIKNTFNPE 286 (293)
T ss_pred CCccCCCCCCCCCCCeEeceeCHHHHHHHHhCCCc------ccC--HHHHHHHHHCCCcEEEecCCCCC
Confidence 9999999995 899999999999999988776532 333 46888999999999999998874
No 203
>PRK06291 aspartate kinase; Provisional
Probab=99.87 E-value=2.7e-21 Score=216.85 Aligned_cols=238 Identities=23% Similarity=0.333 Sum_probs=176.0
Q ss_pred eEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhcccCC-----Cccc--------
Q 005074 16 RLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNS-----SLAD-------- 82 (715)
Q Consensus 16 ~~VIKiGGs~l~~~~~~~~~~~l~~l~~~I~~l~~~G~~vviVhGgg~~i~~~~l~~~~~~~~-----~~~~-------- 82 (715)
++|.||||+++.+. ++++++++.|......|+++|+|+|+.+.+++.++........ .+..
T Consensus 2 ~~V~KFGGtSv~~~------~~~~~v~~ii~~~~~~~~~~vvVvSA~~~~Td~L~~~~~~~~~~~~~~~~~~~~~~i~~~ 75 (465)
T PRK06291 2 RLVMKFGGTSVGDG------ERIRHVAKLVKRYRSEGNEVVVVVSAMTGVTDALLEIAEQALDVRDIAKVKDFIADLRER 75 (465)
T ss_pred cEEEEeCcccCCCH------HHHHHHHHHHHHHHhcCCCEEEEEcCCCCCHHHHHHHHHHHHhccchhhHHHHHHHHHHH
Confidence 57999999999975 4688888888876667889999999988888776543321100 0000
Q ss_pred -------c-cCcc-----------------------------ccchHHHHHHcchHHHHHHHHHHhhcCCCCcceE----
Q 005074 83 -------L-QKPQ-----------------------------NELDGKACAAVGQSSLMALYDTLFSQLDVTSSQL---- 121 (715)
Q Consensus 83 -------~-~~~~-----------------------------~~l~~~~~~a~G~~~~~~l~~~~l~~~g~~~~~~---- 121 (715)
+ .... ..-..+.+.+.|+..+..++...|+..|+++..+
T Consensus 76 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~i~s~GE~~Sa~l~~~~L~~~Gi~a~~l~~~~ 155 (465)
T PRK06291 76 HYKAIEEAIKDPDIREEVSKTIDSRIEELEKALVGVSYLGELTPRSRDYILSFGERLSAPILSGALRDLGIKSVALTGGE 155 (465)
T ss_pred HHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHHHHHhccCChHHHHHHHhhhHHHHHHHHHHHHHhCCCCeEEEchHH
Confidence 0 0000 0001245778888888788889999999876533
Q ss_pred --EecccccCchhH----HhHHHHHHHHHHhCCCeEEEeCCCceeccCCCCCCCCce--e--ecchhHHHHHHhhcCCCE
Q 005074 122 --LVTDSDFRDEDF----RKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGI--F--WDNDSLAGLLALELKADL 191 (715)
Q Consensus 122 --~~~~~d~~~~~~----~~~~~~~i~~ll~~g~iPVv~g~d~v~~~~~~~~~~~~~--~--~~~D~~A~~lA~~L~A~~ 191 (715)
+++++++.+.+. +....+.+..+++.|.|||++|+-+.. .+|.. + +++|++|+.+|.+|+|++
T Consensus 156 ~~i~t~~~~~~~~~~~~~~~~~~~~~~~ll~~~~vpVv~Gfig~~-------~~g~~~tlgrggsD~~A~~~A~~l~a~~ 228 (465)
T PRK06291 156 AGIITDSNFGNARPLPKTYERVKERLEPLLKEGVIPVVTGFIGET-------EEGIITTLGRGGSDYSAAIIGAALDADE 228 (465)
T ss_pred CcEEecCCCCceeechhhHHHHHHHHHHHhhcCcEEEEeCcEEcC-------CCCCEEEecCCChHHHHHHHHHhcCCCE
Confidence 455555554332 233345788899999999998842221 12322 2 699999999999999999
Q ss_pred EEEeccCCccccCCCC-CcCccccceeeccchhhHHhcCCCCCcccCChHHHHHHHHHHHHcCCcEEEEeCCCcchHHHH
Q 005074 192 LVLLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKV 270 (715)
Q Consensus 192 li~lTDVdGV~~~dP~-~p~a~~i~~is~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a~~~gv~v~I~~g~~~~~l~~~ 270 (715)
|+++|||||||+.||+ +|++++|++|+++|+.++... |.+..|++++..+.++|+|++|.|++.|+
T Consensus 229 ~~i~tdV~Gi~~~dP~~~~~a~~i~~l~~~ea~~l~~~--------G~~v~~~~a~~~~~~~~i~i~i~~~~~~~----- 295 (465)
T PRK06291 229 IWIWTDVDGVMTTDPRIVPEARVIPKISYIEAMELSYF--------GAKVLHPRTIEPAMEKGIPVRVKNTFNPE----- 295 (465)
T ss_pred EEEEECCCCCCCCCCCCCCCCeEccccCHHHHHHHHhC--------CCcccCHHHHHHHHHcCCcEEEecCCCCC-----
Confidence 9999999999999995 899999999999999887653 55788889999999999999999998774
Q ss_pred HcCCcceeEEecC
Q 005074 271 LEGKRVGTLFHRD 283 (715)
Q Consensus 271 ~tg~~iGT~i~~~ 283 (715)
..||++...
T Consensus 296 ----~~gt~i~~~ 304 (465)
T PRK06291 296 ----FPGTLITSD 304 (465)
T ss_pred ----CCceEEEec
Confidence 468888654
No 204
>PRK09084 aspartate kinase III; Validated
Probab=99.87 E-value=2.2e-21 Score=216.04 Aligned_cols=234 Identities=19% Similarity=0.198 Sum_probs=171.7
Q ss_pred eEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhcccCCC--ccc-----------
Q 005074 16 RLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSS--LAD----------- 82 (715)
Q Consensus 16 ~~VIKiGGs~l~~~~~~~~~~~l~~l~~~I~~l~~~G~~vviVhGgg~~i~~~~l~~~~~~~~~--~~~----------- 82 (715)
|+|.||||+++.+. ++++++++.|+. .+.++++|+|+.+.+++.++........+ +..
T Consensus 1 m~V~KFGGtSv~~~------e~i~~v~~ii~~---~~~~~vvVVSA~~~~Td~L~~~~~~~~~~~~~~~~~~~i~~~h~~ 71 (448)
T PRK09084 1 LVVAKFGGTSVADF------DAMNRSADIVLS---NPNTRLVVLSASAGVTNLLVALAEGAEPGDERLALLDEIRQIQYA 71 (448)
T ss_pred CEEEEECccCcCCH------HHHHHHHHHHhc---CCCCEEEEEcCCCCchHHHHHHHHHHHcCccHHHHHHHHHHHHHH
Confidence 57999999999985 357888887764 47889999999888888765443221100 000
Q ss_pred ----c--c-------------------Cc---cccchHHHHHHcchHHHHHHHHHHhhcCCCCc-----ceEEecccccC
Q 005074 83 ----L--Q-------------------KP---QNELDGKACAAVGQSSLMALYDTLFSQLDVTS-----SQLLVTDSDFR 129 (715)
Q Consensus 83 ----~--~-------------------~~---~~~l~~~~~~a~G~~~~~~l~~~~l~~~g~~~-----~~~~~~~~d~~ 129 (715)
+ . .. ......+.+.+.|+..+..++...|+..|+++ .++++|+++|.
T Consensus 72 ~~~~l~~~~~~~~~i~~~~~~l~~l~~~~~~~~~~~~~d~i~s~GE~lSa~l~~~~L~~~Gi~a~~l~~~~~i~t~~~~~ 151 (448)
T PRK09084 72 ILDRLGDPNVVREEIERLLENITVLAEAASLATSPALTDELVSHGELMSTLLFVELLRERGVQAEWFDVRKVMRTDDRFG 151 (448)
T ss_pred HHHHhccchHHHHHHHHHHHHHHHHHHhhhhcCChhhhhhhhhHHHHHHHHHHHHHHHhCCCCcEEEchHHeEEecCCCC
Confidence 0 0 00 00012256778898888888999999999885 45677877776
Q ss_pred chhH-----HhHHHHHHHHHHhCCCeEEEeCCCceeccCCCCCCCCc--ee--ecchhHHHHHHhhcCCCEEEEeccCCc
Q 005074 130 DEDF-----RKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSG--IF--WDNDSLAGLLALELKADLLVLLSDVEG 200 (715)
Q Consensus 130 ~~~~-----~~~~~~~i~~ll~~g~iPVv~g~d~v~~~~~~~~~~~~--~~--~~~D~~A~~lA~~L~A~~li~lTDVdG 200 (715)
+..+ .....+.+..+++.+ +||++|+.+... .|. ++ ++||++|+.+|..|+|+.++++|||||
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~-v~Vv~Gf~g~~~-------~G~~ttLgRggSD~~a~~~a~~l~a~~~~i~tdv~G 223 (448)
T PRK09084 152 RAEPDVAALAELAQEQLLPLLAEG-VVVTQGFIGSDE-------KGRTTTLGRGGSDYSAALLAEALNASRVEIWTDVPG 223 (448)
T ss_pred cccccHHHHHHHHHHHHHHhhcCC-cEEecCeeecCC-------CCCEeecCCCchHHHHHHHHHHcCCCEEEEEECCCc
Confidence 6533 112335677778889 999998544322 222 23 799999999999999999999999999
Q ss_pred cccCCCC-CcCccccceeeccchhhHHhcCCCCCcccCChHHHHHHHHHHHHcCCcEEEEeCCCcchHHHHHcCCcceeE
Q 005074 201 LYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTL 279 (715)
Q Consensus 201 V~~~dP~-~p~a~~i~~is~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a~~~gv~v~I~~g~~~~~l~~~~tg~~iGT~ 279 (715)
||++||+ +|++++|++|+++|+.++...|.+ -+ +..+...+.+++++++|.|++.|+ ..||+
T Consensus 224 i~t~dP~~~~~a~~i~~is~~ea~ela~~Ga~------vl--h~~~~~~~~~~~i~i~i~~~~~~~---------~~GT~ 286 (448)
T PRK09084 224 IYTTDPRIVPAAKRIDEISFEEAAEMATFGAK------VL--HPATLLPAVRSNIPVFVGSSKDPE---------AGGTW 286 (448)
T ss_pred cccCCCCCCCCCeEcccCCHHHHHHHHhCCCc------cc--CHHHHHHHHHcCCcEEEEeCCCCC---------CCceE
Confidence 9999995 899999999999999987776532 23 346888899999999999998774 46888
Q ss_pred EecC
Q 005074 280 FHRD 283 (715)
Q Consensus 280 i~~~ 283 (715)
+...
T Consensus 287 I~~~ 290 (448)
T PRK09084 287 ICND 290 (448)
T ss_pred EecC
Confidence 8654
No 205
>cd04258 AAK_AKiii-LysC-EC AAK_AKiii-LysC-EC: Amino Acid Kinase Superfamily (AAK), AKiii-LysC-EC: this CD includes the N-terminal catalytic aspartokinase (AK) domain of the lysine-sensitive aspartokinase isoenzyme AKIII. AKIII is a monofunctional class enzyme (LysC) found in some bacteria such as E. coli. Aspartokinase is the first enzyme in the aspartate metabolic pathway and catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP. In E. coli, LysC is reported to be a homodimer of 50 kD subunits.
Probab=99.85 E-value=2.9e-20 Score=194.38 Aligned_cols=225 Identities=19% Similarity=0.198 Sum_probs=159.2
Q ss_pred eEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhcccCCC----cc----cccCc-
Q 005074 16 RLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSS----LA----DLQKP- 86 (715)
Q Consensus 16 ~~VIKiGGs~l~~~~~~~~~~~l~~l~~~I~~l~~~G~~vviVhGgg~~i~~~~l~~~~~~~~~----~~----~~~~~- 86 (715)
|.|+||||+++.+.+ ++.++++.|.. .+.++|+|+|+.+.+++.++........+ +. .+...
T Consensus 1 m~V~KFGGtSv~~~~------~i~~v~~ii~~---~~~~~vVVVSA~~~vTd~L~~~~~~~~~~~~~~~~~~l~~l~~~h 71 (292)
T cd04258 1 MVVAKFGGTSVADYA------AMLRCAAIVKS---DASVRLVVVSASAGVTNLLVALADAAESGEEIESIPQLHEIRAIH 71 (292)
T ss_pred CEEEEECccccCCHH------HHHHHHHHHhc---cCCCEEEEEeCCCCchHHHHHHHHHHhcCCcchhhHHHHHHHHHH
Confidence 479999999999854 57777777653 26789999999887887664433211100 00 00000
Q ss_pred ----------------------------------c--ccchHHHHHHcchHHHHHHHHHHhhcCCCCcc-----eEEecc
Q 005074 87 ----------------------------------Q--NELDGKACAAVGQSSLMALYDTLFSQLDVTSS-----QLLVTD 125 (715)
Q Consensus 87 ----------------------------------~--~~l~~~~~~a~G~~~~~~l~~~~l~~~g~~~~-----~~~~~~ 125 (715)
. ..-..+.+.+.|+..+..++...|+..|+++. ++++|+
T Consensus 72 ~~~~~~L~~~~~~~~~i~~~~~~l~~~~~~~~~~~~~~~~~~d~i~s~GE~lSa~lla~~L~~~Gi~a~~ld~~~~i~t~ 151 (292)
T cd04258 72 FAILNRLGAPEELRAKLEELLEELTQLAEGAALLGELSPASRDELLSFGERMSSLLFSEALREQGVPAEWFDVRTVLRTD 151 (292)
T ss_pred HHHHHHhhcchhHHHHHHHHHHHHHHHHhhhccccccChHhHhHhhhHHHHHHHHHHHHHHHhCCCCeEEEchHHeEEec
Confidence 0 00012466788888777888899999998764 446677
Q ss_pred cccCchhHH-----hHHHHHHHHHHhCCCeEEEeCCCceeccCCCCCCCCce--e--ecchhHHHHHHhhcCCCEEEEec
Q 005074 126 SDFRDEDFR-----KQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGI--F--WDNDSLAGLLALELKADLLVLLS 196 (715)
Q Consensus 126 ~d~~~~~~~-----~~~~~~i~~ll~~g~iPVv~g~d~v~~~~~~~~~~~~~--~--~~~D~~A~~lA~~L~A~~li~lT 196 (715)
+++.+..+. ......+.. +..+.|||++|+-+... .|.. + ++||++|+.+|.+|+|+.++++|
T Consensus 152 ~~~~~a~~~~~~~~~~~~~~~~~-~~~~~v~Vv~Gf~g~~~-------~G~~ttLGrggsD~~a~~~a~~l~a~~~~i~t 223 (292)
T cd04258 152 SRFGRAAPDLNALAELAAKLLKP-LLAGTVVVTQGFIGSTE-------KGRTTTLGRGGSDYSAALLAEALHAEELQIWT 223 (292)
T ss_pred CCCccccccHHHHHHHHHHHHHH-hhcCCEEEECCccccCC-------CCCEEecCCCchHHHHHHHHHHcCCCEEEEEE
Confidence 776654431 122233443 35668999998533222 2222 3 89999999999999999999999
Q ss_pred cCCccccCCCC-CcCccccceeeccchhhHHhcCCCCCcccCChHHHHHHHHHHHHcCCcEEEEeCCCcc
Q 005074 197 DVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMD 265 (715)
Q Consensus 197 DVdGV~~~dP~-~p~a~~i~~is~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a~~~gv~v~I~~g~~~~ 265 (715)
||||||+.||+ +|++++|++|+++|+.++...|+ .-| +.++...+.++++|++|.|.+.|+
T Consensus 224 dv~Gv~~~dP~~~~~a~~i~~isy~Ea~ela~~Ga------kvl--hp~a~~~~~~~~ipi~i~~~~~p~ 285 (292)
T cd04258 224 DVAGIYTTDPRICPAARAIKEISFAEAAEMATFGA------KVL--HPATLLPAIRKNIPVFVGSSKDPE 285 (292)
T ss_pred CCCccCCCCCCCCCCCeEeceeCHHHHHHHHHCCC------ccc--CHHHHHHHHHcCCcEEEEeCCCCC
Confidence 99999999995 89999999999999999877663 334 447888999999999999988774
No 206
>PRK05925 aspartate kinase; Provisional
Probab=99.85 E-value=9.1e-21 Score=209.30 Aligned_cols=236 Identities=21% Similarity=0.215 Sum_probs=166.9
Q ss_pred cceEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhcccCCC----cc-------c
Q 005074 14 VKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSS----LA-------D 82 (715)
Q Consensus 14 ~k~~VIKiGGs~l~~~~~~~~~~~l~~l~~~I~~l~~~G~~vviVhGgg~~i~~~~l~~~~~~~~~----~~-------~ 82 (715)
|.++|.||||+++.+. +++.++++.|.. ..++++|+++.+.+++.+.......... +. .
T Consensus 1 ~~~~V~KFGGtSv~~~------e~i~~v~~ii~~----~~~~vVVvSA~~~~Td~L~~~~~~a~~~~~~~~~~i~~~~~~ 70 (440)
T PRK05925 1 MAPLVYKFGGTSLGTA------ESIRRVCDIICK----EKPSFVVVSAVAGVTDLLEEFCRLSKGKREALTEKIREKHEE 70 (440)
T ss_pred CCcEEEEECccccCCH------HHHHHHHHHHhc----CCCEEEEECCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence 3578999999999984 357777777753 3568999999888887764332210000 00 0
Q ss_pred ----c------c------------CccccchHHHHHHcchHHHHHHHHHHhhcCCCCc-----ceEEecccccCchhH--
Q 005074 83 ----L------Q------------KPQNELDGKACAAVGQSSLMALYDTLFSQLDVTS-----SQLLVTDSDFRDEDF-- 133 (715)
Q Consensus 83 ----~------~------------~~~~~l~~~~~~a~G~~~~~~l~~~~l~~~g~~~-----~~~~~~~~d~~~~~~-- 133 (715)
+ . ..-.....+.+.+.|+..+..++...|+..|+++ .++++|+++|.+..+
T Consensus 71 ~~~~l~~~~~~~~~~~~L~~~~~~~~~~~~~~d~i~s~GE~~Sa~l~a~~L~~~Gi~a~~ld~~~~i~t~~~~~~a~~~~ 150 (440)
T PRK05925 71 IAKELGIEFSLSPWWERLEHFEDVEEISSEDQARILAIGEDISASLICAYCCTYVLPLEFLEARQVILTDDQYLRAVPDL 150 (440)
T ss_pred HHHHhhcchhhhHHHHHHHHHHHhCcCCchhhhhheehhHHHHHHHHHHHHHhCCCCeEEEcHHHhEeecCCccccccCH
Confidence 0 0 0000112256678899888888999999999865 355677776765443
Q ss_pred HhHHHHHHHHHHhCCCeEEEeCCCceeccCCCCCCCCc--ee--ecchhHHHHHHhhcCCCEEEEeccCCccccCCCC-C
Q 005074 134 RKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSG--IF--WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-E 208 (715)
Q Consensus 134 ~~~~~~~i~~ll~~g~iPVv~g~d~v~~~~~~~~~~~~--~~--~~~D~~A~~lA~~L~A~~li~lTDVdGV~~~dP~-~ 208 (715)
...........++.+.|||++|+.+... .|. ++ ++||++|+.+|.+|+|+.++++|||||||++||+ +
T Consensus 151 ~~~~~~~~~~~~~~~~v~Vv~GF~g~~~-------~G~~ttLgrGgsD~~AallA~~l~Ad~~~i~TdVdGvytaDP~~~ 223 (440)
T PRK05925 151 ALMQTAWHELALQEDAIYIMQGFIGANS-------SGKTTVLGRGGSDFSASLIAELCKAREVRIYTDVNGIYTMDPKII 223 (440)
T ss_pred HHHHHHHHHhhccCCcEEEecCcceeCC-------CCCEEEeccCcHHHHHHHHHHHcCCCEEEEEEcCCccCCCCcCCC
Confidence 1122233333456778999998543332 222 23 9999999999999999999999999999999995 8
Q ss_pred cCccccceeeccchhhHHhcCCCCCcccCChHHHHHHHHHHHHcCCcEEEEeCCCcchHHHHHcCCcceeEEecC
Q 005074 209 PNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRD 283 (715)
Q Consensus 209 p~a~~i~~is~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a~~~gv~v~I~~g~~~~~l~~~~tg~~iGT~i~~~ 283 (715)
|++++|++++++|+.++...|++ ...++| ...+.++|+|++|.|++.|+ ..||++...
T Consensus 224 ~~A~~i~~is~~ea~ela~~Ga~--vl~~~~------~~~a~~~~Ipi~I~~~~~p~---------~~GT~i~~~ 281 (440)
T PRK05925 224 KDAQLIPELSFEEMQNLASFGAK--VLHPPM------LKPCVRAGIPIFVTSTFDVT---------KGGTWIYAS 281 (440)
T ss_pred CCCeEeeEECHHHHHHHHhCCCC--cCCHHH------HHHHHHCCCcEEEecCCCCC---------CCccEEecC
Confidence 99999999999999987766543 455544 47889999999999999875 368888654
No 207
>PRK09034 aspartate kinase; Reviewed
Probab=99.84 E-value=3.9e-20 Score=206.63 Aligned_cols=235 Identities=21% Similarity=0.224 Sum_probs=168.8
Q ss_pred eEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCChhH-------hhHHHhhhhcccCCC--ccc----
Q 005074 16 RLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVG-------VGRQRLRYRKLVNSS--LAD---- 82 (715)
Q Consensus 16 ~~VIKiGGs~l~~~~~~~~~~~l~~l~~~I~~l~~~G~~vviVhGgg~~-------i~~~~l~~~~~~~~~--~~~---- 82 (715)
|.|.||||+++.+.+ +++++++.|.. .+.++|+|+|+.+. +++.++........+ +..
T Consensus 1 m~V~KFGGtSv~~~~------~i~~v~~ii~~---~~~~~vvVVSA~~~~~~~~~~~Td~L~~~~~~~~~~~~~~~~~~~ 71 (454)
T PRK09034 1 MKVVKFGGSSLASAE------QFKKVLNIVKS---DPERKIVVVSAPGKRFKEDTKVTDLLILYAEAVLAGEDYEDIFEA 71 (454)
T ss_pred CEEEEeCccccCCHH------HHHHHHHHHhc---cCCCEEEEEcCCcCCCCCccChHHHHHHHHHHHhcCCcHHHHHHH
Confidence 469999999999743 57777777652 46689999998653 666654333211100 000
Q ss_pred cc--------Cc---------------------c--ccchHHHHHHcchHHHHHHHHHHhhcCCCCcce-----E-Eecc
Q 005074 83 LQ--------KP---------------------Q--NELDGKACAAVGQSSLMALYDTLFSQLDVTSSQ-----L-LVTD 125 (715)
Q Consensus 83 ~~--------~~---------------------~--~~l~~~~~~a~G~~~~~~l~~~~l~~~g~~~~~-----~-~~~~ 125 (715)
+. .. . .....+.+.+.|+.....++...|+..|+++.. + ++|+
T Consensus 72 ~~~~~~~~~~~L~~~~~~~~~~~~~l~~l~~~~~~~~~~~~d~l~s~GE~~S~~l~a~~L~~~g~~a~~~~~~~~~~~t~ 151 (454)
T PRK09034 72 IIARYAEIAKELGLDADILEKIEEILEHLANLASRNPDRLLDAFKARGEDLNAKLIAAYLNYEGIPARYVDPKEAGIIVT 151 (454)
T ss_pred HHHHHHHHHHHhccchHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcEEEchHHceEEec
Confidence 00 00 0 000124677889888888899999999987653 3 5677
Q ss_pred cccCchhHHhHHHHHHHHHHhCCCeEEEeCCCceeccCCCCCCCCce--e--ecchhHHHHHHhhcCCCEEEEeccCCcc
Q 005074 126 SDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGI--F--WDNDSLAGLLALELKADLLVLLSDVEGL 201 (715)
Q Consensus 126 ~d~~~~~~~~~~~~~i~~ll~~g~iPVv~g~d~v~~~~~~~~~~~~~--~--~~~D~~A~~lA~~L~A~~li~lTDVdGV 201 (715)
+++.+........+.+..++..+.|||++|+.+... .|.. + ++||+.|+.+|.+|+|+.+.++||||||
T Consensus 152 ~~~~~a~i~~~~~~~~~~~~~~~~v~Vv~GFig~~~-------~g~~ttlgRggSD~tA~~la~~l~A~~~~i~tdV~Gi 224 (454)
T PRK09034 152 DEPGNAQVLPESYDNLKKLRDRDEKLVIPGFFGVTK-------DGQIVTFSRGGSDITGAILARGVKADLYENFTDVDGI 224 (454)
T ss_pred CCcCceeEcHhhHHHHHHHHhcCCEEEecCccccCC-------CCCEEecCCCcHHHHHHHHHHHcCCCEEEEEecCCcc
Confidence 777665443334566677777888999998533222 2222 3 8999999999999999999999999999
Q ss_pred ccCCCC-CcCccccceeeccchhhHHhcCCCCCcccCChHHHHHHHHHHHHcCCcEEEEeCCCcchHHHHHcCCcceeEE
Q 005074 202 YSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLF 280 (715)
Q Consensus 202 ~~~dP~-~p~a~~i~~is~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a~~~gv~v~I~~g~~~~~l~~~~tg~~iGT~i 280 (715)
|++||+ .|+++.+++|||+|+.++...| ..-|+| ++...+.++++|++|.|.+.|+ ..||++
T Consensus 225 ~taDPr~v~~A~~l~~lsy~Ea~ela~~G------akvlhp--~ai~~a~~~~Ipi~v~~~~~p~---------~~GT~I 287 (454)
T PRK09034 225 YAANPRIVKNPKSIKEITYREMRELSYAG------FSVFHD--EALIPAYRGGIPINIKNTNNPE---------DPGTLI 287 (454)
T ss_pred CcCCCCCCCCCeECCccCHHHHHHHHhCC------cccCCH--HHHHHHHHcCCCEEEEcCCCCC---------CCccEE
Confidence 999996 9999999999999999987765 344555 5888999999999999988763 458888
Q ss_pred ecC
Q 005074 281 HRD 283 (715)
Q Consensus 281 ~~~ 283 (715)
...
T Consensus 288 ~~~ 290 (454)
T PRK09034 288 VPD 290 (454)
T ss_pred Eec
Confidence 654
No 208
>PLN02551 aspartokinase
Probab=99.84 E-value=4.7e-20 Score=207.21 Aligned_cols=238 Identities=17% Similarity=0.225 Sum_probs=169.2
Q ss_pred cceEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhcccCC------Cccc-----
Q 005074 14 VKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNS------SLAD----- 82 (715)
Q Consensus 14 ~k~~VIKiGGs~l~~~~~~~~~~~l~~l~~~I~~l~~~G~~vviVhGgg~~i~~~~l~~~~~~~~------~~~~----- 82 (715)
..++|.||||+++.+. ++++++++.|... ...++|+|+|+.+.+++.++........ .+..
T Consensus 51 ~~~~V~KFGGtSv~~~------e~i~~v~~iI~~~--~~~~~vVVvSA~~~~Td~L~~~~~~a~~~~~~~~~~~~~l~~i 122 (521)
T PLN02551 51 QLTVVMKFGGSSVASA------ERMREVADLILSF--PDERPVVVLSAMGKTTNNLLLAGEKAVSCGVTNVSEIEELSAI 122 (521)
T ss_pred CceEEEEECCCccCCH------HHHHHHHHHHHhc--CCCCEEEEEcCCCCchHHHHHHHHHHhhccccchhhHHHHHHH
Confidence 4567999999999975 3588888887653 2346889999987787766443110000 0000
Q ss_pred ----------c--c-------------------Ccc--ccchHHHHHHcchHHHHHHHHHHhhcCCCCcc-----eE-Ee
Q 005074 83 ----------L--Q-------------------KPQ--NELDGKACAAVGQSSLMALYDTLFSQLDVTSS-----QL-LV 123 (715)
Q Consensus 83 ----------~--~-------------------~~~--~~l~~~~~~a~G~~~~~~l~~~~l~~~g~~~~-----~~-~~ 123 (715)
+ . ... ..-..+.+.+.|+..+..++...|+..|+++. ++ ++
T Consensus 123 ~~~h~~~~~~L~~~~~~~~~~~~~l~~ll~~i~~~~~~~~~~~d~ils~GE~lSa~lla~~L~~~Gi~a~~lda~~~gi~ 202 (521)
T PLN02551 123 RELHLRTADELGVDESVVEKLLDELEQLLKGIAMMKELTPRTRDYLVSFGERMSTRIFAAYLNKIGVKARQYDAFDIGFI 202 (521)
T ss_pred HHHHHHHHHHhhcchHHHHHHHHHHHHHHHhhhhhcccchHHHHHHHhHHHHHHHHHHHHHHHHCCCCcEEechHHcceE
Confidence 0 0 000 00122577789998888889999999998865 33 56
Q ss_pred cccccCchhHHhHHHHHHHHHH-----hCCCeEEEeCCCcee-ccCCCCCCCCc--ee--ecchhHHHHHHhhcCCCEEE
Q 005074 124 TDSDFRDEDFRKQLYDTVQSLL-----DLRVIPIFNENDAVS-TRKAPYEDSSG--IF--WDNDSLAGLLALELKADLLV 193 (715)
Q Consensus 124 ~~~d~~~~~~~~~~~~~i~~ll-----~~g~iPVv~g~d~v~-~~~~~~~~~~~--~~--~~~D~~A~~lA~~L~A~~li 193 (715)
|+++|.+........+.+...+ +.+.|||++|+.+.. . .|. ++ ++||+.|+.+|.+|+|+.+.
T Consensus 203 t~~~~~~a~i~~~~~~~l~~~l~~~~~~~~~v~Vv~GFig~~~~-------~G~~ttLGRGGSD~sA~~la~~L~A~~v~ 275 (521)
T PLN02551 203 TTDDFTNADILEATYPAVAKRLHGDWIDDPAVPVVTGFLGKGWK-------TGAITTLGRGGSDLTATTIGKALGLREIQ 275 (521)
T ss_pred ecCCCCccchhhhhHHHHHHHHHhhhccCCeEEEEcCccccCCC-------CCcEEecCCChHHHHHHHHHHHcCCCEEE
Confidence 7777776554332223333332 456899999854332 2 222 23 99999999999999999999
Q ss_pred EeccCCccccCCCC-CcCccccceeeccchhhHHhcCCCCCcccCChHHHHHHHHHHHHcCCcEEEEeCCCcchHHHHHc
Q 005074 194 LLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLE 272 (715)
Q Consensus 194 ~lTDVdGV~~~dP~-~p~a~~i~~is~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a~~~gv~v~I~~g~~~~~l~~~~t 272 (715)
++|||||||++||+ .|+++.|++|||+|+.++..+|++ -++| ++...+.+++||++|.|.+.|+
T Consensus 276 I~tDV~Gi~taDPr~v~~A~~l~~lsy~Ea~elA~~Gak------Vlhp--~ai~pa~~~~Ipi~vknt~~p~------- 340 (521)
T PLN02551 276 VWKDVDGVLTCDPRIYPNAVPVPYLTFDEAAELAYFGAQ------VLHP--QSMRPAREGDIPVRVKNSYNPT------- 340 (521)
T ss_pred EEeCCCceeCCCCCCCCCceEecccCHHHHHHHHhCCCc------ccCH--HHHHHHHHCCceEEEEecCCCC-------
Confidence 99999999999996 999999999999999998887643 3444 7889999999999999987663
Q ss_pred CCcceeEEecC
Q 005074 273 GKRVGTLFHRD 283 (715)
Q Consensus 273 g~~iGT~i~~~ 283 (715)
..||++...
T Consensus 341 --~~GT~I~~~ 349 (521)
T PLN02551 341 --APGTLITKT 349 (521)
T ss_pred --CCCcEEecc
Confidence 568988654
No 209
>cd04247 AAK_AK-Hom3 AAK_AK-Hom3: Amino Acid Kinase Superfamily (AAK), AK-Hom3; this CD includes the N-terminal catalytic domain of the aspartokinase HOM3, a monofunctional class enzyme found in Saccharomyces cerevisiae and other related AK domains. Aspartokinase, the first enzyme in the aspartate metabolic pathway, catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP, and in fungi, is responsible for the production of threonine, isoleucine and methionine. S. cerevisiae has a single aspartokinase isoenzyme type, which is regulated by feedback, allosteric inhibition by L-threonine. Recent studies show that the allosteric transition triggered by binding of threonine to AK involves a large change in the conformation of the native hexameric enzyme that is converted to an inactive one of different shape and substantially smaller hydrodynamic size.
Probab=99.83 E-value=8.6e-20 Score=191.65 Aligned_cols=235 Identities=16% Similarity=0.198 Sum_probs=156.4
Q ss_pred eEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCChh------HhhHHHhhhhcccC----CCccc---
Q 005074 16 RLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAV------GVGRQRLRYRKLVN----SSLAD--- 82 (715)
Q Consensus 16 ~~VIKiGGs~l~~~~~~~~~~~l~~l~~~I~~l~~~G~~vviVhGgg~------~i~~~~l~~~~~~~----~~~~~--- 82 (715)
++|.||||+++.+. ..++++.|..-...+.++|+|+|+.+ .+++.++....... ..+..
T Consensus 2 ~~V~KFGGtSv~~~--------~~~v~~~i~~~~~~~~~~vVVvSA~~~~~~~~gvTd~L~~~~~~a~~~~~~~~~~~l~ 73 (306)
T cd04247 2 WVVQKFGGTSVGKF--------PDNIADDIVKAYLKGNKVAVVCSARSTGTKAEGTTNRLLQAADEALDAQEKAFHDIVE 73 (306)
T ss_pred CEEEEeCchhhccH--------HHHHHHHHHhhhccCCceEEEEeccccCCCccChHHHHHHHHHHHHhhccccHHHHHH
Confidence 57999999999974 24556555544456778999999865 56666543321100 00000
Q ss_pred ------------c-c--Cc---------------c------------ccchHHHHHHcchHHHHHHHHHHhhcCCCCcce
Q 005074 83 ------------L-Q--KP---------------Q------------NELDGKACAAVGQSSLMALYDTLFSQLDVTSSQ 120 (715)
Q Consensus 83 ------------~-~--~~---------------~------------~~l~~~~~~a~G~~~~~~l~~~~l~~~g~~~~~ 120 (715)
+ . .. . ..-..+.+.+.|+..+..++...|++.|+++..
T Consensus 74 ~i~~~h~~~~~~L~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~l~~~~~~~~d~i~s~GE~lSa~l~a~~L~~~Gi~a~~ 153 (306)
T cd04247 74 DIRSDHLAAARKFIKNPELQAELEEEINKECELLRKYLEAAKILSEISPRTKDLVISTGEKLSCRFMAAVLRDRGVDAEY 153 (306)
T ss_pred HHHHHHHHHHHHhccChhhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEE
Confidence 0 0 00 0 000114666888888888899999999987653
Q ss_pred E-----Eeccccc--CchhHHhHHHHHH-HHHHh-CCCeEEEeCCCceeccCCCCCCCCc--ee--ecchhHHHHHHhhc
Q 005074 121 L-----LVTDSDF--RDEDFRKQLYDTV-QSLLD-LRVIPIFNENDAVSTRKAPYEDSSG--IF--WDNDSLAGLLALEL 187 (715)
Q Consensus 121 ~-----~~~~~d~--~~~~~~~~~~~~i-~~ll~-~g~iPVv~g~d~v~~~~~~~~~~~~--~~--~~~D~~A~~lA~~L 187 (715)
+ +.++.+. ..........+.+ ..+.+ .+.|||++|+-+... .|. ++ +++|++|+.+|..|
T Consensus 154 ld~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Vv~GFig~~~-------~G~~ttLGRgGsD~~A~~la~~l 226 (306)
T cd04247 154 VDLSHIVDLDFSIEALDQTFYDELAQVLGEKITACENRVPVVTGFFGNVP-------GGLLSQIGRGYTDLCAALCAVGL 226 (306)
T ss_pred EcHHHheecCCCccccccchhHHHHHHHHHHhhccCCceEEeeccEecCC-------CCCeEEeCCCchHHHHHHHHHHc
Confidence 3 3333221 0111111112222 22332 577999998533222 222 23 99999999999999
Q ss_pred CCCEEEEeccCCccccCCCC-CcCccccceeeccchhhHHhcCCCCCcccCChHHHHHHHHHHHHcCCcEEEEeCCCcch
Q 005074 188 KADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDS 266 (715)
Q Consensus 188 ~A~~li~lTDVdGV~~~dP~-~p~a~~i~~is~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a~~~gv~v~I~~g~~~~~ 266 (715)
+|+.++++|||||||++||+ +|++++|++|+++|+.++..+|++ -+ +.++...+.+++||++|.|.+.|+
T Consensus 227 ~a~~v~i~tdVdGvyt~DP~~~~~a~~i~~is~~ea~el~~~Gak------Vl--Hp~ti~pa~~~~Ipi~i~nt~~P~- 297 (306)
T cd04247 227 NADELQIWKEVDGIFTADPRKVPTARLLPSITPEEAAELTYYGSE------VI--HPFTMEQVIKARIPIRIKNVENPR- 297 (306)
T ss_pred CCCEEEEeecCCeeECCCCCCCCCCeEecccCHHHHHHHHhCcCc------cc--CHHHHHHHHHcCCcEEEecCCCCC-
Confidence 99999999999999999995 899999999999999998776543 33 447899999999999999988774
Q ss_pred HHHHHcCCcceeEEec
Q 005074 267 IIKVLEGKRVGTLFHR 282 (715)
Q Consensus 267 l~~~~tg~~iGT~i~~ 282 (715)
..||++.+
T Consensus 298 --------~~GT~I~~ 305 (306)
T cd04247 298 --------GEGTVIYP 305 (306)
T ss_pred --------CCCcEEcC
Confidence 45887753
No 210
>PRK09466 metL bifunctional aspartate kinase II/homoserine dehydrogenase II; Provisional
Probab=99.81 E-value=1.9e-19 Score=211.95 Aligned_cols=240 Identities=16% Similarity=0.165 Sum_probs=169.7
Q ss_pred hhcccceEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhcccCCCc---------
Q 005074 10 FVKDVKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSL--------- 80 (715)
Q Consensus 10 ~~~~~k~~VIKiGGs~l~~~~~~~~~~~l~~l~~~I~~l~~~G~~vviVhGgg~~i~~~~l~~~~~~~~~~--------- 80 (715)
+.-.|++.|.||||+++.+.+ +++++++.|....+.+ +++|+|+.+.+++.++..........
T Consensus 6 ~~~~M~~~V~KFGGtSv~~~e------~i~~v~~iI~~~~~~~--~vVVVSA~~~~Td~L~~~~~~~~~~~~~~~~~l~~ 77 (810)
T PRK09466 6 QAGAMGRQLHKFGGSSLADAK------CYRRVAGILAEYSQPD--DLVVVSAAGKTTNQLISWLKLSQTDRLSAHQVQQT 77 (810)
T ss_pred ccccceeEEEEECccccCCHH------HHHHHHHHHhhhccCC--EEEEEcCCCCCHHHHHHHHHHhhcCchhHHHHHHH
Confidence 444567899999999999854 5888888876554433 78888898878877654432211000
Q ss_pred ----c-c----cc--Ccc----------------------ccchHHHHHHcchHHHHHHHHHHhhcCCCCcceE-----E
Q 005074 81 ----A-D----LQ--KPQ----------------------NELDGKACAAVGQSSLMALYDTLFSQLDVTSSQL-----L 122 (715)
Q Consensus 81 ----~-~----~~--~~~----------------------~~l~~~~~~a~G~~~~~~l~~~~l~~~g~~~~~~-----~ 122 (715)
+ + +. ..+ .....+.+.+.|+..+..++...|+..|+++..+ +
T Consensus 78 i~~~h~~~~~~L~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~~d~ils~GE~~Sa~lla~~L~~~G~~a~~ld~~~~i 157 (810)
T PRK09466 78 LRRYQQDLIEGLLPAEQARSLLSRLISDLERLAALLDGGINDAQYAEVVGHGEVWSARLMAALLNQQGLPAAWLDARSFL 157 (810)
T ss_pred HHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHHHhhccCCchhhhheecHHHHHHHHHHHHHHHhCCCCcEEEcHHHhe
Confidence 0 0 00 000 0001245668888888889999999999886533 3
Q ss_pred ecccccCchhH-HhHHHHHHHHHHhCC--CeEEEeCCCceeccCCCCCCCCc--ee--ecchhHHHHHHhhcCCCEEEEe
Q 005074 123 VTDSDFRDEDF-RKQLYDTVQSLLDLR--VIPIFNENDAVSTRKAPYEDSSG--IF--WDNDSLAGLLALELKADLLVLL 195 (715)
Q Consensus 123 ~~~~d~~~~~~-~~~~~~~i~~ll~~g--~iPVv~g~d~v~~~~~~~~~~~~--~~--~~~D~~A~~lA~~L~A~~li~l 195 (715)
.++..+ .... .....+.++.+++.+ .+||++|+.+... .|. ++ ++||+.|+.+|.+|+|+.+.++
T Consensus 158 ~~~~~~-~~~i~~~~~~~~l~~~~~~~~~~v~Vv~GF~g~~~-------~G~~ttLGRGGSD~tA~~la~~l~A~~v~i~ 229 (810)
T PRK09466 158 RAERAA-QPQVDEGLSYPLLQQLLAQHPGKRLVVTGFISRNE-------AGETVLLGRNGSDYSATLIGALAGVERVTIW 229 (810)
T ss_pred ecCCCC-CcccchhhhHHHHHHHHhccCCeEEEeeCccccCC-------CCCEEEcCCChHHHHHHHHHHHcCCCEEEEE
Confidence 333322 2222 222346777777654 7999998544322 222 23 8999999999999999999999
Q ss_pred ccCCccccCCCC-CcCccccceeeccchhhHHhcCCCCCcccCChHHHHHHHHHHHHcCCcEEEEeCCCcchHHHHHcCC
Q 005074 196 SDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGK 274 (715)
Q Consensus 196 TDVdGV~~~dP~-~p~a~~i~~is~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a~~~gv~v~I~~g~~~~~l~~~~tg~ 274 (715)
|||||||++||+ .|++++|++|||+|+.++...|++ -++| ++...+.+++||++|.|.+.|+
T Consensus 230 tDV~Gi~taDPr~v~~A~~i~~isy~Ea~ela~~Gak------VlHp--~ti~pa~~~~Ipi~V~ntf~p~--------- 292 (810)
T PRK09466 230 SDVAGVYSADPRKVKDACLLPLLRLDEASELARLAAP------VLHA--RTLQPVSGSDIDLQLRCSYQPE--------- 292 (810)
T ss_pred eCCCccccCCcccCCCceEcccCCHHHHHHHHHcCcc------ccCH--HHHHHHHHcCCeEEEecCCCCC---------
Confidence 999999999996 899999999999999998887643 3444 7889999999999999988763
Q ss_pred cceeEEec
Q 005074 275 RVGTLFHR 282 (715)
Q Consensus 275 ~iGT~i~~ 282 (715)
..||++..
T Consensus 293 ~~GT~I~~ 300 (810)
T PRK09466 293 QGSTRIER 300 (810)
T ss_pred CCceEEec
Confidence 45888854
No 211
>PRK09436 thrA bifunctional aspartokinase I/homoserine dehydrogenase I; Provisional
Probab=99.79 E-value=1.3e-18 Score=206.39 Aligned_cols=237 Identities=18% Similarity=0.225 Sum_probs=169.8
Q ss_pred eEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhcccCC---Cc----------c-
Q 005074 16 RLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNS---SL----------A- 81 (715)
Q Consensus 16 ~~VIKiGGs~l~~~~~~~~~~~l~~l~~~I~~l~~~G~~vviVhGgg~~i~~~~l~~~~~~~~---~~----------~- 81 (715)
|.|.||||+++.+. ++++++++.|....+. .++|+|+|+.+.+++.++........ .+ +
T Consensus 1 m~V~KFGGtSv~~~------~~i~~v~~iI~~~~~~-~~~vVVVSA~~~vTd~L~~~~~~~~~~~~~~~~~~~~~~~~h~ 73 (819)
T PRK09436 1 MRVLKFGGTSVANA------ERFLRVADIIESNARQ-EQVAVVLSAPAKVTNHLVAMIEKAAKGDDAYPEILDAERIFHE 73 (819)
T ss_pred CEEEEeCccccCCH------HHHHHHHHHHHhhccc-CCEEEEEcCCcCcHHHHHHHHHHHhcCCchHHHHHHHHHHHHH
Confidence 36999999999984 4688888888765444 68999999988888876543321000 00 0
Q ss_pred ---cc----cC--cc--------------c---------cc---hHHHHHHcchHHHHHHHHHHhhcCCCCcc-----eE
Q 005074 82 ---DL----QK--PQ--------------N---------EL---DGKACAAVGQSSLMALYDTLFSQLDVTSS-----QL 121 (715)
Q Consensus 82 ---~~----~~--~~--------------~---------~l---~~~~~~a~G~~~~~~l~~~~l~~~g~~~~-----~~ 121 (715)
++ .. .. . .+ ..+.+.+.|+..+..++...|+..|+++. ++
T Consensus 74 ~~~~l~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~~~~~~~~~~~~d~i~s~GE~lSa~lla~~L~~~Gi~a~~ld~~~~ 153 (819)
T PRK09436 74 LLDGLAAALPGFDLAQLKAKVDQEFAQLKDILHGISLLGECPDSVNAAIISRGERLSIAIMAAVLEARGHDVTVIDPREL 153 (819)
T ss_pred HHHHHHhhccchhhHHHHHHHHHHHHHHHHHHHHHHhhccCChhhhhheeeHHHHHHHHHHHHHHHhCCCCeEEECHHHe
Confidence 00 00 00 0 00 12455678888777888999999998765 34
Q ss_pred EecccccCchhH-HhHHHHHHHHHH-hCCCeEEEeCCCceeccCCCCCCCCce--e--ecchhHHHHHHhhcCCCEEEEe
Q 005074 122 LVTDSDFRDEDF-RKQLYDTVQSLL-DLRVIPIFNENDAVSTRKAPYEDSSGI--F--WDNDSLAGLLALELKADLLVLL 195 (715)
Q Consensus 122 ~~~~~d~~~~~~-~~~~~~~i~~ll-~~g~iPVv~g~d~v~~~~~~~~~~~~~--~--~~~D~~A~~lA~~L~A~~li~l 195 (715)
++|++++.+... .....+.+++++ +.+.|||++|+.+... .|.. + ++||++|+.+|..|+|+.++++
T Consensus 154 i~t~~~~~~~~~~~~~~~~~i~~~~~~~~~v~Vv~Gfig~~~-------~G~~ttlGRgGSD~~A~~~A~~l~A~~~~i~ 226 (819)
T PRK09436 154 LLADGHYLESTVDIAESTRRIAASFIPADHVILMPGFTAGNE-------KGELVTLGRNGSDYSAAILAACLDADCCEIW 226 (819)
T ss_pred EEecCCCCCceechHhhHHHHHHHHhcCCcEEEecCcccCCC-------CCCEEEeCCCCchHHHHHHHHHcCCCEEEEE
Confidence 567666655433 222335556554 4689999998433211 2222 3 7899999999999999999999
Q ss_pred ccCCccccCCCC-CcCccccceeeccchhhHHhcCCCCCcccCChHHHHHHHHHHHHcCCcEEEEeCCCcchHHHHHcCC
Q 005074 196 SDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGK 274 (715)
Q Consensus 196 TDVdGV~~~dP~-~p~a~~i~~is~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a~~~gv~v~I~~g~~~~~l~~~~tg~ 274 (715)
|||||||+.||+ +|++++|++|+++|+.++...| -+..|++++..+.++|+|++|.|++.|+
T Consensus 227 tdVdGvyt~DP~~~~~A~~i~~isy~ea~el~~~G--------~kvlhp~a~~~a~~~~Ipi~i~n~~~p~--------- 289 (819)
T PRK09436 227 TDVDGVYTADPRVVPDARLLKSLSYQEAMELSYFG--------AKVLHPRTIAPIAQFQIPCLIKNTFNPQ--------- 289 (819)
T ss_pred ECCCceECCCCCCCCCCeEeeEecHHHHHHHHhcC--------CccchHHHHHHHHHCCceEEEccCCCCC---------
Confidence 999999999995 8999999999999999876543 3566889999999999999999998774
Q ss_pred cceeEEecC
Q 005074 275 RVGTLFHRD 283 (715)
Q Consensus 275 ~iGT~i~~~ 283 (715)
..||.+...
T Consensus 290 ~~GT~I~~~ 298 (819)
T PRK09436 290 APGTLIGAE 298 (819)
T ss_pred CCceEEEec
Confidence 468888653
No 212
>PRK08961 bifunctional aspartate kinase/diaminopimelate decarboxylase protein; Provisional
Probab=99.79 E-value=1.3e-18 Score=208.64 Aligned_cols=239 Identities=18% Similarity=0.187 Sum_probs=169.4
Q ss_pred cceEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhcccCC-Ccc-----------
Q 005074 14 VKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNS-SLA----------- 81 (715)
Q Consensus 14 ~k~~VIKiGGs~l~~~~~~~~~~~l~~l~~~I~~l~~~G~~vviVhGgg~~i~~~~l~~~~~~~~-~~~----------- 81 (715)
++++|.||||+++.+.+ +++++++.|+.-.+.|.++++|+|+.+.+++.++........ .+.
T Consensus 7 ~~~~V~KFGGtSv~~~~------~~~~v~~ii~~~~~~~~~~vvVvSA~~~~Td~L~~~~~~~~~~~~~~~~~~i~~~~~ 80 (861)
T PRK08961 7 DRWVVLKFGGTSVSRRH------RWDTIAKIVRKRLAEGGRVLVVVSALSGVSNELEAIIAAAGAGDSASRVAAIRQRHR 80 (861)
T ss_pred CCcEEEEECccccCCHH------HHHHHHHHHHhhcccCCCEEEEEeCCCCchHHHHHHHHHHhccCHHHHHHHHHHHHH
Confidence 47789999999999854 588888888766567889999999988888766443211000 000
Q ss_pred ----cc--cCc----------cc---------cc---hHHHHHHcchHHHHHHHHHHhhcCCCCcc-----eEEeccccc
Q 005074 82 ----DL--QKP----------QN---------EL---DGKACAAVGQSSLMALYDTLFSQLDVTSS-----QLLVTDSDF 128 (715)
Q Consensus 82 ----~~--~~~----------~~---------~l---~~~~~~a~G~~~~~~l~~~~l~~~g~~~~-----~~~~~~~d~ 128 (715)
++ ... .. .+ ..+.+.+.|+..+..++...|+..|+++. +++.+++++
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~i~s~GE~lSa~lla~~L~~~Gi~a~~ld~~~~~~~~~~~ 160 (861)
T PRK08961 81 ELLAELGVDAEAVLAERLAALQRLLDGIRALTRASLRWQAEVLGQGELLSTTLGAAYLEASGLDMGWLDAREWLTALPQP 160 (861)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHHHHHHHHHhccCChhhhheEEEehHHHHHHHHHHHHHhCCCCcEEEcHHHhEeecCcc
Confidence 00 000 00 00 01233477877777788999999998874 344444421
Q ss_pred C---chhH------HhHHHHHHHHHHhCC-CeEEEeCCCceeccCCCCCCCCc--ee--ecchhHHHHHHhhcCCCEEEE
Q 005074 129 R---DEDF------RKQLYDTVQSLLDLR-VIPIFNENDAVSTRKAPYEDSSG--IF--WDNDSLAGLLALELKADLLVL 194 (715)
Q Consensus 129 ~---~~~~------~~~~~~~i~~ll~~g-~iPVv~g~d~v~~~~~~~~~~~~--~~--~~~D~~A~~lA~~L~A~~li~ 194 (715)
. .... .....+.+..+++.+ .|||++|+.+... .|. ++ +++|++|+.+|.+|+|+++++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Vv~Gf~g~~~-------~g~~ttLgrggsD~~A~~iA~~l~a~~~~i 233 (861)
T PRK08961 161 NQSEWSQYLSVSCQWQSDPALRERFAAQPAQVLITQGFIARNA-------DGGTALLGRGGSDTSAAYFAAKLGASRVEI 233 (861)
T ss_pred ccccccccccceecHhhHHHHHHHHhccCCeEEEeCCcceeCC-------CCCEEEEeCCchHHHHHHHHHHcCCCEEEE
Confidence 1 1111 112345666677665 4999998544332 222 23 999999999999999999999
Q ss_pred eccCCccccCCCC-CcCccccceeeccchhhHHhcCCCCCcccCChHHHHHHHHHHHHcCCcEEEEeCCCcchHHHHHcC
Q 005074 195 LSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEG 273 (715)
Q Consensus 195 lTDVdGV~~~dP~-~p~a~~i~~is~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a~~~gv~v~I~~g~~~~~l~~~~tg 273 (715)
+|||||||++||+ +|++++|++|+++|+.++.. .|+|..|++++..+.++||+++|.|++.++
T Consensus 234 ~tdv~Gv~t~dP~~~~~a~~i~~ls~~e~~el~~--------~g~~v~~~~a~~~a~~~~i~i~v~~~~~~~-------- 297 (861)
T PRK08961 234 WTDVPGMFSANPKEVPDARLLTRLDYDEAQEIAT--------TGAKVLHPRSIKPCRDAGIPMAILDTERPD-------- 297 (861)
T ss_pred EeCCCccccCCCCCCCCceEecccCHHHHHHHHH--------CCCeEECHHHHHHHHHCCCCEEEEeCCCCC--------
Confidence 9999999999995 89999999999999998665 367888999999999999999999998763
Q ss_pred CcceeEEec
Q 005074 274 KRVGTLFHR 282 (715)
Q Consensus 274 ~~iGT~i~~ 282 (715)
..||++..
T Consensus 298 -~~gT~I~~ 305 (861)
T PRK08961 298 -LSGTSIDG 305 (861)
T ss_pred -CCccEEeC
Confidence 35666654
No 213
>cd04240 AAK_UC AAK_UC: Uncharacterized (UC) amino acid kinase-like proteins found mainly in archaea and a few bacteria. Sequences in this CD are members of the Amino Acid Kinase (AAK) superfamily.
Probab=99.75 E-value=2.8e-17 Score=164.15 Aligned_cols=201 Identities=24% Similarity=0.302 Sum_probs=128.8
Q ss_pred EEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhcccCCCcccccCccccchHHHHHH
Q 005074 18 VVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAA 97 (715)
Q Consensus 18 VIKiGGs~l~~~~~~~~~~~l~~l~~~I~~l~~~G~~vviVhGgg~~i~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~a 97 (715)
|||||||++.+ +..+.+.+..+. |++++||.|||+...+.+- .++. .++.+... ...++.+
T Consensus 1 vvKiGGsl~~~---------~~~~~~~l~~~~--~~~v~iV~GGG~~A~~~r~-~~~~--~g~~~~~a-----d~mgila 61 (203)
T cd04240 1 VVKIGGSLIRE---------AVRLLRWLKTLS--GGGVVIVPGGGPFADVVRR-YQER--KGLSDAAA-----HWMAILA 61 (203)
T ss_pred CEEEccccccc---------HHHHHHHHHhcc--CCCEEEEcCCcHHHHHHHH-HHHH--cCCChHHH-----HHHHHHH
Confidence 79999999865 345666665553 8899999999987555432 1111 11111111 1122323
Q ss_pred cchHHHHHHHHHHhhcCCCCcceEEecccccCchhHHhHHHHHHHHHHhCCCeEEEeCCCceeccCCCCCCCCcee-ecc
Q 005074 98 VGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIF-WDN 176 (715)
Q Consensus 98 ~G~~~~~~l~~~~l~~~g~~~~~~~~~~~d~~~~~~~~~~~~~i~~ll~~g~iPVv~g~d~v~~~~~~~~~~~~~~-~~~ 176 (715)
.-+.. .+|.... . . .. . .....+..++..|.+||+.+....... . ..+..+ +|+
T Consensus 62 t~~na------~~l~~~~--~-~----------~~-~-~~~~~~~~~~~~g~ipV~~P~~~~~~~--~--~~~~~~~~tt 116 (203)
T cd04240 62 MEQYG------YLLADLE--P-R----------LV-A-RTLAELTDVLERGKIAILLPYRLLLDT--D--PLPHSWEVTS 116 (203)
T ss_pred HHHHH------HHHhccC--C-c----------cc-c-CCHHHHHHHHHCCCcEEEeCchhhccc--C--CCCcccccCH
Confidence 22222 2222111 0 0 00 0 012466788999999999762211110 0 012224 999
Q ss_pred hhHHHHHHhhcCCCEEEEeccCCccccCCCCCcCccccceeeccchhhHHhcCCCCCcccCChHHHHHHHHHHHHcCCcE
Q 005074 177 DSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPV 256 (715)
Q Consensus 177 D~~A~~lA~~L~A~~li~lTDVdGV~~~dP~~p~a~~i~~is~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a~~~gv~v 256 (715)
|++|+++|.+|+|++|+++|||||||++| +++|++++.+|+.. . .... +|.+|+ +.++|+++
T Consensus 117 D~lAa~lA~~l~A~~Li~ltdVdGVy~~d-----a~~i~~i~~~e~~~---~----~~id-~~~~~~-----~~~~gi~v 178 (203)
T cd04240 117 DSIAAWLAKKLGAKRLVIVTDVDGIYEKD-----GKLVNEIAAAELLG---E----TSVD-PAFPRL-----LTKYGIRC 178 (203)
T ss_pred HHHHHHHHHHcCCCEEEEEeCCccccCCC-----CcCccccCHHHhCC---C----Ceeh-hhHHHH-----HHhCCCeE
Confidence 99999999999999999999999999874 89999999877642 1 1222 355554 57889999
Q ss_pred EEEeCCCcchHHHHHcCC-cceeEE
Q 005074 257 VITSGFAMDSIIKVLEGK-RVGTLF 280 (715)
Q Consensus 257 ~I~~g~~~~~l~~~~tg~-~iGT~i 280 (715)
+|+||+.++++...+.|+ ..||.+
T Consensus 179 ~I~~g~~~~~l~~~l~g~~~~GT~I 203 (203)
T cd04240 179 YVVNGDDPERVLAALRGREGVGTRI 203 (203)
T ss_pred EEECCCCccHHHHHHCCCCCCCCCC
Confidence 999999999999988887 678853
No 214
>PRK09181 aspartate kinase; Validated
Probab=99.68 E-value=3.3e-16 Score=174.64 Aligned_cols=162 Identities=19% Similarity=0.207 Sum_probs=121.0
Q ss_pred HHHHHcchHHHHHHHHHHhhcCCCCcceEEecccccCchhHHhHHHHHHHHHHh----CCCeEEEeCCCceeccCCCCCC
Q 005074 93 KACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLD----LRVIPIFNENDAVSTRKAPYED 168 (715)
Q Consensus 93 ~~~~a~G~~~~~~l~~~~l~~~g~~~~~~~~~~~d~~~~~~~~~~~~~i~~ll~----~g~iPVv~g~d~v~~~~~~~~~ 168 (715)
+.+.+.|+..+..++...|+..|+++..+-.+ ++....... ..+.++..++ .+.|||++|+. .. .
T Consensus 140 D~l~s~GE~lSa~lla~~L~~~Gi~a~~ld~~--~~~~~~~~~-~~~~i~~~l~~~~~~~~v~Vv~GF~--~~------~ 208 (475)
T PRK09181 140 EMLASIGEAHSAFNTALLLQNRGVNARFVDLT--GWDDDDPLT-LDERIKKAFKDIDVTKELPIVTGYA--KC------K 208 (475)
T ss_pred HHHhhHhHHHHHHHHHHHHHhCCCCeEEeccc--cccCCcccc-hHHHHHHHHhhhccCCcEEEecCCc--CC------C
Confidence 45667888877788899999999887654222 111001111 1345555555 57899999952 22 1
Q ss_pred CCc--ee--ecchhHHHHHHhhcCCCEEEEeccCCccccCCCC-C--cCccccceeeccchhhHHhcCCCCCcccCChHH
Q 005074 169 SSG--IF--WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-E--PNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTA 241 (715)
Q Consensus 169 ~~~--~~--~~~D~~A~~lA~~L~A~~li~lTDVdGV~~~dP~-~--p~a~~i~~is~~e~~~~~~~g~~~~~~~ggM~~ 241 (715)
.|. ++ ++||+.|+.+|.+|+|+.+.++|||+ ||++||+ . |+++.|++|||+|+.++..+|++ -++
T Consensus 209 ~G~itTLGRGGSDyTAailAa~L~A~~~~IwTDV~-I~taDPriV~~~~A~~i~~lsy~Ea~ELA~~GAk------VLH- 280 (475)
T PRK09181 209 EGLMRTFDRGYSEMTFSRIAVLTGADEAIIHKEYH-LSSADPKLVGEDKVVPIGRTNYDVADQLANLGME------AIH- 280 (475)
T ss_pred CCCEEecCCChHHHHHHHHHHHcCCCEEEEeCCCc-cccCCCCcCCCCCCeEcCccCHHHHHHHHHcCch------hcC-
Confidence 222 23 99999999999999999999999997 9999996 6 79999999999999998887644 344
Q ss_pred HHHHHHHHHHcCCcEEEEeCCCcchHHHHHcCCcceeEEecC
Q 005074 242 KVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRD 283 (715)
Q Consensus 242 Kl~aa~~a~~~gv~v~I~~g~~~~~l~~~~tg~~iGT~i~~~ 283 (715)
.++...+.+++||++|.|.+.|+ ..||++...
T Consensus 281 -p~ti~pa~~~~Ipi~V~nt~~p~---------~~GT~I~~~ 312 (475)
T PRK09181 281 -PKAAKGLRQAGIPLRIKNTFEPE---------HPGTLITKD 312 (475)
T ss_pred -HHHHHHHHHcCCeEEEecCCCCC---------CCCeEEecC
Confidence 47999999999999999987763 469998654
No 215
>cd04248 AAK_AK-Ectoine AAK_AK-Ectoine: Amino Acid Kinase Superfamily (AAK), AK-Ectoine; this CD includes the N-terminal catalytic domain of the aspartokinase of the ectoine (1,4,5,6-tetrahydro-2-methyl pyrimidine-4-carboxylate) biosynthetic pathway found in Methylomicrobium alcaliphilum, Vibrio cholerae, and other various halotolerant or halophilic bacteria. Bacteria exposed to hyperosmotic stress accumulate organic solutes called 'compatible solutes' of which ectoine, a heterocyclic amino acid, is one. Apart from its osmotic function, ectoine also exhibits a protective effect on proteins, nucleic acids and membranes against a variety of stress factors. de novo synthesis of ectoine starts with the phosphorylation of L-aspartate and shares its first two enzymatic steps with the biosynthesis of amino acids of the aspartate family: aspartokinase and L-aspartate-semialdehyde dehydrogenase. The M. alcaliphilum and the V. cholerae aspartokinases are encoded on the ectABCask operon.
Probab=99.67 E-value=1.4e-15 Score=157.57 Aligned_cols=153 Identities=15% Similarity=0.157 Sum_probs=111.3
Q ss_pred HHHHHcchHHHHHHHHHHhhcCCCCcceEEecc----cccCchhHHhHHHHHHHHHHhCCCeEEEeCCCceeccCCCCCC
Q 005074 93 KACAAVGQSSLMALYDTLFSQLDVTSSQLLVTD----SDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYED 168 (715)
Q Consensus 93 ~~~~a~G~~~~~~l~~~~l~~~g~~~~~~~~~~----~d~~~~~~~~~~~~~i~~ll~~g~iPVv~g~d~v~~~~~~~~~ 168 (715)
+.+.++|+..+..++...|+..|+++.-+-.+. +++.... ...+.+..+...+.|||++|+. .. .
T Consensus 134 d~l~S~GE~~Sa~l~a~~L~~~Gi~A~~vD~~~~~~~~~~t~~~---~i~~~~~~~~~~~~v~IvtGF~--~~------~ 202 (304)
T cd04248 134 ELLASLGEAHSAFNTALLLQNRGVNARFVDLSGWRDSGDMTLDE---RISEAFRDIDPRDELPIVTGYA--KC------A 202 (304)
T ss_pred HHHhhhCHHHHHHHHHHHHHHCCCCeEEECcccccccCCCCcHH---HHHHHHHhhccCCcEEEeCCcc--CC------C
Confidence 355678887777788899999998776432221 1111111 1122223223367899999852 11 1
Q ss_pred CCc--ee--ecchhHHHHHHhhcCCCEEEEeccCCccccCCCC-C--cCccccceeeccchhhHHhcCCCCCcccCChHH
Q 005074 169 SSG--IF--WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-E--PNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTA 241 (715)
Q Consensus 169 ~~~--~~--~~~D~~A~~lA~~L~A~~li~lTDVdGV~~~dP~-~--p~a~~i~~is~~e~~~~~~~g~~~~~~~ggM~~ 241 (715)
+|. ++ ++||+.|+.+|.+|+|+.+.|+|||+ ||++||+ . |+++.|++|||+|+.++..+|.+ .++|
T Consensus 203 ~G~itTLGRGGSDyTAs~iAa~l~A~ev~I~TDV~-i~taDPriV~~~~A~~i~~lsY~EA~ELA~~Gak------vLHP 275 (304)
T cd04248 203 EGLMREFDRGYSEMTFSRIAVLTGASEAIIHKEFH-LSSADPKLVGEDKARPIGRTNYDVADQLANLGME------AIHP 275 (304)
T ss_pred CCCEEEcCCCcHHHHHHHHHHHcCCCEEEEECCCc-eecCCCCccCCCCceEeCccCHHHHHHHHHcChh------hcCH
Confidence 232 23 99999999999999999999999996 9999996 6 68999999999999998887643 3444
Q ss_pred HHHHHHHHHHcCCcEEEEeCCCcc
Q 005074 242 KVNAAYCAACAGIPVVITSGFAMD 265 (715)
Q Consensus 242 Kl~aa~~a~~~gv~v~I~~g~~~~ 265 (715)
+++..+.+++||++|.|.+.|+
T Consensus 276 --~ai~pa~~~~IPi~Vkntf~P~ 297 (304)
T cd04248 276 --KAAKGLRQAGIPLRVKNTFEPD 297 (304)
T ss_pred --HHHHHHHHcCCeEEEecCCCCC
Confidence 7999999999999999988774
No 216
>KOG0456 consensus Aspartate kinase [Amino acid transport and metabolism]
Probab=99.51 E-value=1.1e-13 Score=142.82 Aligned_cols=168 Identities=17% Similarity=0.245 Sum_probs=120.1
Q ss_pred HHHHHcchHHHHHHHHHHhhcCCCCcceEE------ecccccCchh-HHhHHHHHHHHH----HhCCCeEEEeCCCceec
Q 005074 93 KACAAVGQSSLMALYDTLFSQLDVTSSQLL------VTDSDFRDED-FRKQLYDTVQSL----LDLRVIPIFNENDAVST 161 (715)
Q Consensus 93 ~~~~a~G~~~~~~l~~~~l~~~g~~~~~~~------~~~~d~~~~~-~~~~~~~~i~~l----l~~g~iPVv~g~d~v~~ 161 (715)
+.+.++|+..+..++...+...|.++.+.- ++.++|.+.. .+...+...+.+ .....+||+.|+-+
T Consensus 193 D~lvs~GE~lS~rf~aA~lnd~G~kar~~D~~~I~~~~~d~~t~~d~~~a~~~av~k~~~~~~aken~VPVvTGf~G--- 269 (559)
T KOG0456|consen 193 DYLVSFGECLSTRFFAAYLNDIGHKARQYDAFEIGFITTDDFTNDDILEATYPAVSKLLSGDWAKENAVPVVTGFLG--- 269 (559)
T ss_pred hHhhhhhhHHHHHHHHHHHHhcCccceeechhheeccccccccchhHHHHHHHHHHHhcccccccCCccceEeeccc---
Confidence 355678888777788899999998887651 2333333321 122222222221 23578999998422
Q ss_pred cCCCCCCCCc--ee--ecchhHHHHHHhhcCCCEEEEeccCCccccCCC-CCcCccccceeeccchhhHHhcCCCCCccc
Q 005074 162 RKAPYEDSSG--IF--WDNDSLAGLLALELKADLLVLLSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGDKSRVGR 236 (715)
Q Consensus 162 ~~~~~~~~~~--~~--~~~D~~A~~lA~~L~A~~li~lTDVdGV~~~dP-~~p~a~~i~~is~~e~~~~~~~g~~~~~~~ 236 (715)
-++ +.+. ++ +.+|..|+.+|.+|++|.+.++.|||||++.|| +.|.|++++.++++|+.++..+|+. .
T Consensus 270 --k~~-~tg~lt~lGRG~sDl~At~i~~al~~~EiQVWKdVDGv~T~DP~~~p~Ar~vp~lT~dEAaELaYfGaq--V-- 342 (559)
T KOG0456|consen 270 --KGW-PTGALTTLGRGGSDLTATTIGKALGLDEIQVWKDVDGVLTCDPRIYPGARLVPYLTFDEAAELAYFGAQ--V-- 342 (559)
T ss_pred --cCc-cccceecccCCchhhHHHHHHHHcCchhhhhhhhcCceEecCCccCCCccccCccCHHHHHHHHhhhhh--h--
Confidence 111 1111 12 889999999999999999999999999999999 5999999999999999998888754 2
Q ss_pred CChHHHHHHHHHHHHcCCcEEEEeCCCcchHHHHHcCCcceeEEecC
Q 005074 237 GGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRD 283 (715)
Q Consensus 237 ggM~~Kl~aa~~a~~~gv~v~I~~g~~~~~l~~~~tg~~iGT~i~~~ 283 (715)
-+..+...+.+..|||+|-|...|- ..||++.++
T Consensus 343 ----lHP~sM~~~~~~~IPvRvKN~~NP~---------~~GTvI~~d 376 (559)
T KOG0456|consen 343 ----LHPFSMRPAREGRIPVRVKNSYNPT---------APGTVITPD 376 (559)
T ss_pred ----ccccccchhhccCcceEeecCCCCC---------CCceEeccc
Confidence 2335666788999999999976663 568988776
No 217
>COG2054 Uncharacterized archaeal kinase related to aspartokinases, uridylate kinases [General function prediction only]
Probab=99.36 E-value=2.5e-11 Score=113.76 Aligned_cols=119 Identities=19% Similarity=0.264 Sum_probs=88.9
Q ss_pred HhCCCeEEEeCCCceeccCCCCCCCCcee-ecchhHHHHHHhhcCCCEEEEeccCCccccCCCCCcCccccceeeccchh
Q 005074 145 LDLRVIPIFNENDAVSTRKAPYEDSSGIF-WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQ 223 (715)
Q Consensus 145 l~~g~iPVv~g~d~v~~~~~~~~~~~~~~-~~~D~~A~~lA~~L~A~~li~lTDVdGV~~~dP~~p~a~~i~~is~~e~~ 223 (715)
.+.+.+||+-+.-.+... .+-...| +.||.++.++|.++++.++++.|||||||+.+| +++++++|+.+|+.
T Consensus 90 i~~~~~aVLLPyrlLr~~----DplpHSW~VTSDsis~~Ia~~~~~~~vv~aTDVdGI~~~~~---~~kLv~eI~A~dl~ 162 (212)
T COG2054 90 IKPDAKAVLLPYRLLRKT----DPLPHSWEVTSDSISVWIAAKAGATEVVKATDVDGIYEEDP---KGKLVREIRASDLK 162 (212)
T ss_pred cCcccceEeeehHhhhcC----CCCCcceeecccHHHHHHHHHcCCcEEEEEecCCcccccCC---cchhhhhhhHhhcc
Confidence 455667787542222211 0122346 999999999999999999999999999999976 46899999999886
Q ss_pred hHHhcCCCCCcccCChHHHHHHHHHHHHcCCcEEEEeCCCcchHHHHHcCC-cceeEEec
Q 005074 224 AEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGK-RVGTLFHR 282 (715)
Q Consensus 224 ~~~~~g~~~~~~~ggM~~Kl~aa~~a~~~gv~v~I~~g~~~~~l~~~~tg~-~iGT~i~~ 282 (715)
. +. ..-.+..|| .+.+.+.+++|+||+.|+++.....|+ .+||.+..
T Consensus 163 ~----~~---t~vD~~~P~-----Ll~k~~m~~~Vvng~~pervi~~lrGk~~v~T~Ivg 210 (212)
T COG2054 163 T----GE---TSVDPYLPK-----LLVKYKMNCRVVNGKEPERVILALRGKEVVGTLIVG 210 (212)
T ss_pred c----Cc---ccccchhhH-----HHHHcCCceEEECCCCHHHHHHHHhccccceEEEeC
Confidence 3 11 223445665 567889999999999999998888874 56888764
No 218
>PF05893 LuxC: Acyl-CoA reductase (LuxC); InterPro: IPR008670 This family consists of several bacterial Acyl-CoA reductase (LuxC) proteins. The channelling of fatty acids into the fatty aldehyde substrate for the bacterial bioluminescence reaction is catalysed by a fatty acid reductase multienzyme complex, which channels fatty acids through the thioesterase (LuxD), synthetase (LuxE) and reductase (LuxC) components [].; GO: 0003995 acyl-CoA dehydrogenase activity, 0008218 bioluminescence, 0055114 oxidation-reduction process
Probab=99.35 E-value=6.7e-10 Score=122.11 Aligned_cols=244 Identities=15% Similarity=0.143 Sum_probs=166.9
Q ss_pred EEEeeeceeEEEEEcCC-ChhhHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEec--C-cc
Q 005074 396 LEKTSCPLGVLLIVFES-RPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVT--S-RE 470 (715)
Q Consensus 396 ~~~~~~PlGVV~~I~p~-~P~~~~~~~~~ALaaGN~vvlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~--~-~~ 470 (715)
.+.++.|.|+|+.|.|. -|.+.++.++.+|.+||..|+|+|+..|.++..|.+.+.+...+. + ...+.++. + ..
T Consensus 81 ~~~~~~p~g~v~Hi~agNvp~~~~~S~~~~lL~gn~nivK~ss~d~~~~~~l~~~l~~~~~~~~l-~~~i~v~~~~~~d~ 159 (399)
T PF05893_consen 81 GYVRAFPRGLVFHIAAGNVPLVGFYSLVRGLLSGNANIVKLSSRDPFLAPALLRSLAEIDPEHPL-ADSIAVVYWPGGDE 159 (399)
T ss_pred chhhccCCceEEEEcCCCccchHHHHHHHHHHhCCceEEECCCCchhHHHHHHHHHHhhCccchh-hhcEEEEEecCCch
Confidence 46779999999999995 588889999999999999999999999999999999887643221 2 13456663 3 44
Q ss_pred hhhHhhcCCCCccEEEeecCHHHHHHHHhhcC-CCEEEecCC-cceEEEcCCCCHHHHHHHHHhhccCCC-ccccccceE
Q 005074 471 EIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK-IPVLGHADG-ICHVYVDKSANLDVAKNIVIDAKIDYP-AACNAMETL 547 (715)
Q Consensus 471 ~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a~-~~~~lElGG-k~p~iV~~dADl~~A~~~iv~~~f~n~-g~C~a~~rv 547 (715)
++.+.+.. ..|++..+||.++.+.+.+... .+-.+.-|- .+-.||+.+++++.+++.+..=.+... +.|.|++.+
T Consensus 160 ~~~~~~~~--~~D~vv~wGgd~ti~~ir~~~~~~~~~i~fg~k~S~avi~~~~~~~~~a~~~a~Di~~~dQ~aCsSp~~i 237 (399)
T PF05893_consen 160 ELEEALSQ--QADAVVAWGGDETIRAIRQPLPPGARLIEFGPKYSFAVIDAEAELEEAARRLANDIFLFDQQACSSPQVI 237 (399)
T ss_pred HHHHHHHH--HCCEEEEeCCHHHHHHHHHHcCCCCcEeeeCCceEEEEEcCchhHHHHHHHHHHHHHHhhCcccCCCeEE
Confidence 56666653 5999999999999999977443 334444444 477888999999999998877655544 499999999
Q ss_pred EEc---CcccCchhHHHHHHHHHhcCCeEe-cC---cc---c-----c-----------ccc--c-----C--CCCCCcc
Q 005074 548 LVH---KDLACNGALNELVVELQHEGVGLF-GG---PR---A-----S-----------KLL--Q-----I--PETRLFH 592 (715)
Q Consensus 548 ~V~---~~i~d~~f~~~l~~~~~~~~~~~~-g~---~~---~-----~-----------~~~--p-----v--~~~~~~~ 592 (715)
||. ..-. ++|.++|.+++++....+- +. .. . . ..+ + | .+.....
T Consensus 238 fv~~g~~~~~-~~f~~~L~~~L~~~~~~~p~~~~s~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~~~~~ 316 (399)
T PF05893_consen 238 FVETGDGDSV-EEFAERLAEALERAAERYPRGELSIDEAAAISSLRAEAELRYALDGEYRVWSSDDNSWTVIVSPEPPLL 316 (399)
T ss_pred EEECCCcccH-HHHHHHHHHHHHHHHHhCCCcCCCHHHHHHHHHHHHHHHHHHHhcCCcceeecCCCCEEEEECCCcccc
Confidence 999 2334 4888888777765421110 00 00 0 0 001 0 1 1111111
Q ss_pred ccccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEecCHHHHHHHHH-hcCcc
Q 005074 593 HEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLC-QVDSA 644 (715)
Q Consensus 593 eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~i~t~d~~~~~~~~~-~l~~G 644 (715)
..-++=.+.|.++++++|++..+|...-=-|.+++... .+..++++ -..+|
T Consensus 317 ~~pl~r~v~v~~v~~~~e~~~~l~~~~~lQTvgi~~~~-~~~~~~~~~l~~~G 368 (399)
T PF05893_consen 317 PSPLNRTVYVVPVDSLEELVPYLRPKRGLQTVGIYPWS-ERLEELARALAAAG 368 (399)
T ss_pred cCCCCCEEEEEEcCCHHHHHHHhhhcCCCeeEEEecCh-hhHHHHHHHHHhcC
Confidence 22234478899999999999999988431466776544 44556665 34444
No 219
>KOG2436 consensus Acetylglutamate kinase/acetylglutamate synthase [Amino acid transport and metabolism]
Probab=99.09 E-value=3.5e-10 Score=121.85 Aligned_cols=243 Identities=21% Similarity=0.229 Sum_probs=146.0
Q ss_pred ccceEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhcccCCCccc----ccCccc
Q 005074 13 DVKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLAD----LQKPQN 88 (715)
Q Consensus 13 ~~k~~VIKiGGs~l~~~~~~~~~~~l~~l~~~I~~l~~~G~~vviVhGgg~~i~~~~l~~~~~~~~~~~~----~~~~~~ 88 (715)
..+.+|+|-|+...++ .+..++++++.|+..|.++|||||+++|+++.+. .+++++.|.+ .+...|
T Consensus 94 ~q~fvV~~~g~~~~t~--------~~~sl~s~lafl~h~gl~pIvv~g~~~qin~~l~--~~~ie~~y~~~~RvTda~t~ 163 (520)
T KOG2436|consen 94 DQKFVVIKSGEAISTS--------LLHSLASDLAFLHHVGLRPIVVPGTQPQINRLLA--ERGIEPEYVDGYRVTDAHTL 163 (520)
T ss_pred CceEEEEecccccccc--------hHHHHHHHHHHHhcCCceEEEecCccHHHHHHHH--HcCCCcccccceecccHHHH
Confidence 3344555555555333 2688999999999999999999999999999553 3556555554 222222
Q ss_pred cchHHHHHHcchHHHHHHHHHHhhcCCCCcce---------E-------EecccccCchhH-HhHHHHHHHHHHhCCCeE
Q 005074 89 ELDGKACAAVGQSSLMALYDTLFSQLDVTSSQ---------L-------LVTDSDFRDEDF-RKQLYDTVQSLLDLRVIP 151 (715)
Q Consensus 89 ~l~~~~~~a~G~~~~~~l~~~~l~~~g~~~~~---------~-------~~~~~d~~~~~~-~~~~~~~i~~ll~~g~iP 151 (715)
.+.+. .-.++.... + -..|++.|-.+.+ . ++...+|.--+. .+.+.+.|+.+++.|.+|
T Consensus 164 q~~~~--~~~~E~n~~-l-v~nL~~~g~~ar~~s~g~~v~~~f~a~~~~v~d~~~y~~~gei~~vd~d~i~~l~~~G~mp 239 (520)
T KOG2436|consen 164 QAAKE--SVSLEANLN-L-VINLSQLGTRARPSSSGVRVGNFFPADRNGVLDGEDYGLVGEIKKVDVDRIRHLLDAGSMP 239 (520)
T ss_pred HHhhh--cchhhhhhH-H-HHHHHHhhceeccccccccccceeecccccccccceeeeecccceechhhhhhhhhCCCch
Confidence 22221 011111100 0 0112222211111 0 111112221111 235679999999999999
Q ss_pred EEeCCCceeccCCCCCCCCcee-ecchhHHHHHHhhcCCCEEEEeccCCccccCCCCCcCccccceeeccchhhHHhcCC
Q 005074 152 IFNENDAVSTRKAPYEDSSGIF-WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGD 230 (715)
Q Consensus 152 Vv~g~d~v~~~~~~~~~~~~~~-~~~D~~A~~lA~~L~A~~li~lTDVdGV~~~dP~~p~a~~i~~is~~e~~~~~~~g~ 230 (715)
++.. ...+..|..+ +|+|.+|..+|.+|+|+++++++|+.-+... +++.+.-++.+|....+...+
T Consensus 240 ~L~s--------la~TaSGqvlnvNa~~~a~elA~~L~~~kli~l~d~g~~l~e-----~ge~~S~l~l~~e~~~l~k~~ 306 (520)
T KOG2436|consen 240 LLRS--------LAATASGQVLNVNADEVAGELALALGPDKLILLMDKGRILKE-----NGEDISSLILQEEDAGLRKPS 306 (520)
T ss_pred hehh--------hcccCccceEEeeHHHHhhHHHhccCcceeEEeccccccccc-----CcccccccccchhHhhhhhhh
Confidence 9963 2233456666 9999999999999999999999998223344 367888888888776665554
Q ss_pred CCCcccCChHHHHHHHHHHHHcCCcEEEEeCCCcchH-HHHHcCCcceeEEec
Q 005074 231 KSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSI-IKVLEGKRVGTLFHR 282 (715)
Q Consensus 231 ~~~~~~ggM~~Kl~aa~~a~~~gv~v~I~~g~~~~~l-~~~~tg~~iGT~i~~ 282 (715)
....++++|.+++..+.....-...-+.+......++ ..+++.+..+|.+..
T Consensus 307 qq~~~a~~~v~aV~~~~~~~~p~~~s~~i~~~t~~n~~~~~~te~G~~t~~~~ 359 (520)
T KOG2436|consen 307 QQKNIAANNVKAVKDGIDSSLPRPSSYNIAITTQQNLIKELFTEKGAGTLISG 359 (520)
T ss_pred hhcccccccchhhhhheeeccCcCCCCCcceeecccccceeeccCCCCccccC
Confidence 4457888899988887776322211122222223333 556777666776654
No 220
>KOG2449 consensus Methylmalonate semialdehyde dehydrogenase [Amino acid transport and metabolism; Carbohydrate transport and metabolism]
Probab=98.78 E-value=2.4e-09 Score=95.88 Aligned_cols=68 Identities=16% Similarity=0.156 Sum_probs=65.6
Q ss_pred CCCCCccccccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEecCHHHHHHHHHhcCcceEEEcCCCC
Q 005074 586 PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTR 653 (715)
Q Consensus 586 ~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~i~t~d~~~~~~~~~~l~~G~V~iN~~~~ 653 (715)
|.|.++.|||||||+..+.-+++||||.++|..+||-...|||.|.+.++++.+..++|.+.+|.+..
T Consensus 76 P~ms~ykeeI~gpVlv~l~~~tldd~I~Iin~nPygn~t~i~Tsn~atark~~~e~~a~qig~~~~ip 143 (157)
T KOG2449|consen 76 PNMSCYKEEIFGPVLVRLETETLDDAIFIINNNPYGNGTAIFTSNGATARKFCHEPDAGQIGANVPIP 143 (157)
T ss_pred CCcceeHhhhhcceEEEEeecCCCceeEEEecCCCCceeEEEecCcHHhhhhhcCCCccceecccccc
Confidence 67999999999999999999999999999999999999999999999999999999999999998754
No 221
>PF07368 DUF1487: Protein of unknown function (DUF1487); InterPro: IPR009961 This family consists of several uncharacterised proteins from Drosophila melanogaster. The function of this family is unknown.
Probab=98.49 E-value=8.8e-07 Score=87.26 Aligned_cols=173 Identities=15% Similarity=0.089 Sum_probs=115.9
Q ss_pred eEEEcCCCCHHHHHHHHHhhccCCCccccccceEEEcCcccCchhHHHHHHHHHhcCCeE--------------------
Q 005074 514 HVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGL-------------------- 573 (715)
Q Consensus 514 p~iV~~dADl~~A~~~iv~~~f~n~g~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~~~-------------------- 573 (715)
-+||++|.||+.|+..++.+.- |.=...+.-.|+|||+|. |+|+++++.+++.+.-++
T Consensus 7 lMIvfe~GDlnsA~~~L~~sl~-~Pf~~~~VatVlVqEsir-eefi~rvr~~m~pl~~~va~Hpny~rsl~~i~~l~~~~ 84 (215)
T PF07368_consen 7 LMIVFEDGDLNSAMHYLLESLH-NPFAPGAVATVLVQESIR-EEFIERVRSRMKPLSPQVANHPNYLRSLKKIKCLNAKT 84 (215)
T ss_pred EEEEEeCCCHHHHHHHHHHHHh-CcccCCcEEEEEEeHHHH-HHHHHHHHHhCccCChhhccCcHHHHHHHHHHhcCCeE
Confidence 3899999999999999998744 332344667899999999 799999999887653211
Q ss_pred e-cCccccc--cccC-CCCCCcccccc----CceEEEEEeCCHHHHHHHHHhc--CCCceeEEEecCHHHHHHHHHhcCc
Q 005074 574 F-GGPRASK--LLQI-PETRLFHHEYN----SMVCTVEIVDDVRAAIDHIHQH--GSAHTDCIVAEDQKVAETFLCQVDS 643 (715)
Q Consensus 574 ~-g~~~~~~--~~pv-~~~~~~~eE~F----GPVl~v~~~~~~deAi~~aN~~--~~GL~a~i~t~d~~~~~~~~~~l~~ 643 (715)
+ ++..... --|+ .. -+.+-.| .+|+++-.|++..||+++++.. +|+ +.|||++-...+..++.++.+
T Consensus 85 I~~~~~~~~~~aSPilV~--d~~h~~fg~~PTgViTlhtFRt~~Ea~~l~~kE~l~f~-SVsiW~ekla~~Yel~~~l~~ 161 (215)
T PF07368_consen 85 IVADFENVPPPASPILVC--DFTHSYFGDGPTGVITLHTFRTPKEAIELCAKETLPFD-SVSIWNEKLASAYELAARLPC 161 (215)
T ss_pred EEecccCCCCCCCCEEEc--CCCHHHcCCCCCeEEEEEccCCHHHHHHHHhcCCCCcc-eEEEeCcHHHHHHHHHHhCCC
Confidence 1 1000000 0021 00 0122233 3599999999999999999975 666 999999999999999999999
Q ss_pred ceEEEcCCCCC-CCCCcc-CCcccc-cccccccccccccccccceEEEEEEEcCc
Q 005074 644 AAVFHNASTRF-CDGARF-GLGAEV-GISTSRIHARGPVGVEGLLTTRWILRGNG 695 (715)
Q Consensus 644 G~V~iN~~~~~-~~~~pf-G~g~~s-G~~~~~~~~~g~~gl~~ft~~K~v~~~~~ 695 (715)
..++||+.... .+-.++ .-.+.. =+. .++| -+.+.-.-+.|.|++..+
T Consensus 162 ~~f~iNC~~V~L~PI~~~~~~~~~~v~i~-~gyH---YE~l~~~~~~k~IVFP~~ 212 (215)
T PF07368_consen 162 DTFYINCFNVDLSPIMPFFAARKNDVLIA-NGYH---YETLTIGGKRKIIVFPIG 212 (215)
T ss_pred CEEEEEeccCCchhhhhhhhcCCceEEEE-CCee---EEEEEECCeEEEEEEecc
Confidence 99999986543 222222 111110 011 1122 256677778888887654
No 222
>PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed
Probab=97.88 E-value=4.2e-05 Score=94.77 Aligned_cols=102 Identities=13% Similarity=0.193 Sum_probs=75.7
Q ss_pred CCeEEEEeeeceeEEEEEcCCChhhHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccccCcCceEEecCcch
Q 005074 392 DGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDTVGEKLIGLVTSREE 471 (715)
Q Consensus 392 ~~~~~~~~~~PlGVV~~I~p~~P~~~~~~~~~ALaaGN~vvlKps~~tp~t~~~l~~~~~~al~~alP~gvv~vv~~~~~ 471 (715)
-|.....+..|.|+|++|+||+.. ....++.||++||+||+||++.++ +.++. +|..+.+.+.
T Consensus 1068 TGEsN~L~l~~RG~vlcisp~~~~-~l~Qi~AALaaGn~vi~~~~~~~~-------~~~~~-----Lp~~~~~~~~---- 1130 (1208)
T PRK11905 1068 TGESNLLSLHPRGRVLCVADTEEA-LLRQLAAALATGNVAVVAADSGLA-------AALAD-----LPGLVAARID---- 1130 (1208)
T ss_pred CCcceeEEecCCceEEEECCcHHH-HHHHHHHHHHhCCEEEEeCCcccH-------HHHHh-----Cccccccccc----
Confidence 355566778999999999999743 445778899999999999999976 22221 7777666653
Q ss_pred hhHhhcCCCCccEEEeecCHHHHHHHHhhcC------CCEEEecC
Q 005074 472 IPDLLKLDDVIDLVIPRGSNKLVSQIKESTK------IPVLGHAD 510 (715)
Q Consensus 472 ~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a~------~~~~lElG 510 (715)
+++.+..|++|+.|.||||+++.+.+.++.+ .|++.|..
T Consensus 1131 ~~~~~~~~~~i~~V~~~G~~~~a~~i~~~LA~R~G~Ivpliaet~ 1175 (1208)
T PRK11905 1131 WTQDWEADDPFAGALLEGDAERARAVRQALAARPGAIVPLIAAEP 1175 (1208)
T ss_pred cccccccCCcccEEEEeCCHHHHHHHHHHHHhCCCCcceEEecCC
Confidence 2335566778999999999999998865532 55665553
No 223
>PF00815 Histidinol_dh: Histidinol dehydrogenase; InterPro: IPR012131 Histidinol dehydrogenase (HDH) catalyzes the terminal step in the biosynthesis of histidine in bacteria, fungi, and plants, the four-electron oxidation of L-histidinol to histidine. In 4-electron dehydrogenases, a single active site catalyses 2 separate oxidation steps: oxidation of the substrate alcohol to an intermediate aldehyde; and oxidation of the aldehyde to the product acid, in this case His []. The reaction proceeds via a tightly- or covalently-bound inter-mediate, and requires the presence of 2 NAD molecules []. By contrast with most dehydrogenases, the substrate is bound before the NAD coenzyme []. A Cys residue has been implicated in the catalytic mechanism of the second oxidative step []. In bacteria HDH is a single chain polypeptide; in fungi it is the C-terminal domain of a multifunctional enzyme which catalyzes three different steps of histidine biosynthesis; and in plants it is expressed as nuclear encoded protein precursor which is exported to the chloroplast [].; GO: 0004399 histidinol dehydrogenase activity, 0008270 zinc ion binding, 0051287 NAD binding, 0000105 histidine biosynthetic process, 0055114 oxidation-reduction process; PDB: 1KAE_B 1K75_A 1KAH_A 1KAR_B.
Probab=96.09 E-value=1.5 Score=48.25 Aligned_cols=282 Identities=16% Similarity=0.171 Sum_probs=127.8
Q ss_pred HHHHHHHHHHHHhcccccccccccccccCCCeEEEEeeeceeEEEEEcCC----ChhhHHHHHHHHHHhCCEE--EEeCC
Q 005074 363 KISSLAKSIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES----RPDALVQIASLAIRSGNGL--LLKGG 436 (715)
Q Consensus 363 ~i~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~----~P~~~~~~~~~ALaaGN~v--vlKps 436 (715)
-++.++++++.+....++..... ....+|.....++.|+--|++..|- +|-..++.++||-.||..= +.-|.
T Consensus 69 Ai~~A~~~I~~fh~~q~~~~~~~--~~~~~G~~~g~~~~Pi~rvG~YVPGG~a~~pStvlM~aiPA~vAGV~~Iv~~TPp 146 (412)
T PF00815_consen 69 AIEQAAENIRAFHEAQLPKKDWE--VETEPGVILGQRYRPIERVGLYVPGGRAPYPSTVLMTAIPAKVAGVKEIVVCTPP 146 (412)
T ss_dssp HHHHHHHHHHHHHHTT-----EE--EEEETTEEEEEEEEE-SEEEEE---SSS--THHHHHHHHHHHHHT-SEEEEEE-S
T ss_pred HHHHHHHHHHHHHHHhcCCCCcE--EEecCCcEEEEEEEEhhheEEEccCCCCCccHHHHHcccchhhcCCCeEEEEcCC
Confidence 45666777777654333211110 1112466777889999999999992 4555667788999999754 44454
Q ss_pred cc--hHHHHHHHHHHHHHhcccccCcCceEEec-Ccc-hhhHh---hcCCCCccEEEeecCHHH--HHHHHhhc-CCCEE
Q 005074 437 KE--AMRSNAILHKVITSAIPDTVGEKLIGLVT-SRE-EIPDL---LKLDDVIDLVIPRGSNKL--VSQIKEST-KIPVL 506 (715)
Q Consensus 437 ~~--tp~t~~~l~~~~~~al~~alP~gvv~vv~-~~~-~~~~~---l~~~~~v~~v~fTGS~~~--g~~i~~~a-~~~~~ 506 (715)
.. .+....+.+- + =.|+=.+.. |+. .++++ ..+=|+||+|+==|..=| +|.....- +.-.
T Consensus 147 ~~~G~i~p~vL~Aa--~-------~~Gv~evy~vGGaqAIAAlAyGTeti~~VDkIvGPGN~yV~~AK~~v~g~V~ID~- 216 (412)
T PF00815_consen 147 PKDGKINPAVLAAA--H-------LAGVDEVYKVGGAQAIAALAYGTETIPKVDKIVGPGNAYVTAAKRLVFGDVGIDM- 216 (412)
T ss_dssp S------HHHHHHH--H-------HTT-SEEEE--HHHHHHHHHH--SSS---SEEE---SHHHHHHHHHHHHS-EES--
T ss_pred CccCCCCHHHHHHH--H-------HcCCCEEEecccHHHHHHHHcCCCCCCceeEEECCCcHHHHHHHHHhcCCcccCC-
Confidence 33 1111211111 1 125545555 543 33332 123478999998887543 34333221 1111
Q ss_pred EecCCcc--eEEEcCCCCHHHHHHHHHhhccCCCccccccceEEEcCcccCchhHHHHHHHHHhcCCeEecCcccccccc
Q 005074 507 GHADGIC--HVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLQ 584 (715)
Q Consensus 507 lElGGk~--p~iV~~dADl~~A~~~iv~~~f~n~g~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~~~~g~~~~~~~~p 584 (715)
+-|-+ -+|-|++||.+..+..++.=+=.... ..-++|..+ +++.+++.+++++.-..+ ++. .
T Consensus 217 --~AGPSEv~ViAD~~A~p~~vAaDLLaQAEHd~~----a~~vLvt~s---~~la~~V~~~v~~~l~~l---~r~-~--- 280 (412)
T PF00815_consen 217 --IAGPSEVLVIADETANPEFVAADLLAQAEHDPD----AQAVLVTTS---EELAEAVEAEVERQLEEL---PRR-E--- 280 (412)
T ss_dssp -------EEEEEE-TTS-HHHHHHHHHHHHTT-TT-----EEEEEES----HHHHHHHHHHHHHHHTT----TTH-H---
T ss_pred --CCCCCceEEEECCCCCHHHHHHHHHHHhccCCC----CceEEEECC---HHHHHHHHHHHHHHHHhC---Cch-H---
Confidence 12322 24556789999988777653332211 112344333 244444444444320000 111 0
Q ss_pred CCCCCCccccccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEecCHHHHHHHHHh-cCcceEEEcCCCCC-------CC
Q 005074 585 IPETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQ-VDSAAVFHNASTRF-------CD 656 (715)
Q Consensus 585 v~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~i~t~d~~~~~~~~~~-l~~G~V~iN~~~~~-------~~ 656 (715)
+ -++.+. --.++-++|++||++++|..- +=-..|.++|... +..+ -.+|.|++...+.. ++
T Consensus 281 -----i-~~~sl~-~g~ii~~~~l~ea~~~~N~~A-PEHLel~~~~~~~---~~~~i~~AGaiFlG~~tp~a~GDY~aGp 349 (412)
T PF00815_consen 281 -----I-AEKSLE-NGAIIVVDSLEEAIELANEYA-PEHLELQVEDPEE---LLEKIRNAGAIFLGEYTPEALGDYAAGP 349 (412)
T ss_dssp -----H-HHHHHT-T-EEEE-SSHHHHHHHHHHH---SEEEEESTTHHH---HGGG--S-SEEEESTT--HHHHHHTSSS
T ss_pred -----H-HHHHHH-CCeEEEECCHHHHHHHHHHhh-HHHHHHHHcCHHH---HHHHhhccChhhcCCCCCHHHhhhccCC
Confidence 1 122233 334777899999999999976 4467889999754 4444 56899999976531 11
Q ss_pred --CCccCCcccccccccccccccccccccceEEEEEEE
Q 005074 657 --GARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILR 692 (715)
Q Consensus 657 --~~pfG~g~~sG~~~~~~~~~g~~gl~~ft~~K~v~~ 692 (715)
-+|=+| .. +..|..+...|...-++..
T Consensus 350 NHvLPT~G-----~A----R~~sgLsv~~FlK~~s~~~ 378 (412)
T PF00815_consen 350 NHVLPTGG-----TA----RFSSGLSVDDFLKRISVQR 378 (412)
T ss_dssp ------TT-----GG----GT---S-GGGGEEEEEEEE
T ss_pred CccCCCCc-----cc----cccCCCcHHHccceeeEEE
Confidence 122221 11 2346677888888766554
No 224
>cd06572 Histidinol_dh Histidinol dehydrogenase, HisD, E.C 1.1.1.23. Histidinol dehydrogenase catalyzes the last two steps in the L-histidine biosynthesis pathway, which is conserved in bacteria, archaea, fungi, and plants. These last two steps are (i) the NAD-dependent oxidation of L-histidinol to L-histidinaldehyde, and (ii) the NAD-dependent oxidation of L-histidinaldehyde to L-histidine. In most fungi and in the unicellular choanoflagellate Monosiga bevicollis, the HisD domain is fused with units that catalyze the second and third biosynthesis steps in this same pathway.
Probab=95.51 E-value=4.9 Score=44.06 Aligned_cols=282 Identities=15% Similarity=0.159 Sum_probs=149.1
Q ss_pred HHHHHHHHHHHHhcccccccccccccccCCCeEEEEeeeceeEEEEEcCC----ChhhHHHHHHHHHHhCCEEE--EeCC
Q 005074 363 KISSLAKSIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES----RPDALVQIASLAIRSGNGLL--LKGG 436 (715)
Q Consensus 363 ~i~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~----~P~~~~~~~~~ALaaGN~vv--lKps 436 (715)
-++.+.++++.+.....+..... ...+|.....++.|+--|++..|- +|-..++.+.||-.||+.=| .-|.
T Consensus 56 ai~~A~~nI~~fh~~q~~~~~~~---~~~~G~~~g~~~~Pi~~vG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp 132 (390)
T cd06572 56 AIELAAENIRAFHEAQLPKDWEV---ETEPGVVLGQRYRPIERVGLYVPGGTAPYPSTVLMLAIPAKVAGVKEIVVVTPP 132 (390)
T ss_pred HHHHHHHHHHHHHHHhCCCCeEE---EeCCCcEEEEEEEehhEEEEEecCCCCcchHHHHHhhcchhhcCCCeEEEEeCc
Confidence 45566666776653322221111 112467777889999999999993 56555677889999997644 4454
Q ss_pred c----chHHHHHHHHHHHHHhcccccCcCceEEec-Ccch-hhHh---hcCCCCccEEEeecCHHH--HHHHHhhcCCCE
Q 005074 437 K----EAMRSNAILHKVITSAIPDTVGEKLIGLVT-SREE-IPDL---LKLDDVIDLVIPRGSNKL--VSQIKESTKIPV 505 (715)
Q Consensus 437 ~----~tp~t~~~l~~~~~~al~~alP~gvv~vv~-~~~~-~~~~---l~~~~~v~~v~fTGS~~~--g~~i~~~a~~~~ 505 (715)
. -.|.+- ..+++ .|+=.+.. |+.. ++++ ..+-|+||+|+=-|..-+ +|+... +.--
T Consensus 133 ~~~g~i~p~iL-~aa~~----------~Gv~eiy~vGGaQAIAAlAyGTesi~~VDkIvGPGN~yV~~AK~~v~--g~V~ 199 (390)
T cd06572 133 RKDGKINPAIL-AAAKL----------AGVDEIYKVGGAQAIAALAYGTETIPKVDKIVGPGNIYVTAAKRLVS--GDVG 199 (390)
T ss_pred CCCCCCCHHHH-HHHHH----------cCCcEEeccCCHHHHHHHHcCCcCCCCCCEeeCCchHHHHHHHHHhc--CCcC
Confidence 3 223221 11222 25555555 5433 3322 124688999998887543 333221 1101
Q ss_pred EEecCCcce--EEEcCCCCHHHHHHHHHhhccCCCccccccceEEEcCcccCchhHHHHHHHHHhcCCeEecCccccccc
Q 005074 506 LGHADGICH--VYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLL 583 (715)
Q Consensus 506 ~lElGGk~p--~iV~~dADl~~A~~~iv~~~f~n~g~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~~~~g~~~~~~~~ 583 (715)
+=-+-|-+= +|-|++||.+..+..++.=+=.... ..-++|..+ .++.+++.+++++.-..+ ++.
T Consensus 200 ID~~AGPSEvlIiAD~~A~p~~vAaDLLaQAEH~~~----a~aiLvT~s---~~la~~V~~~v~~ql~~l---~r~---- 265 (390)
T cd06572 200 IDMPAGPSEVLVIADETANPEFVAADLLSQAEHDPD----SQAILVTTS---EELAEAVEEEVERQLAEL---PRR---- 265 (390)
T ss_pred ccCCCCCceEEEEeCCCCCHHHHHHHHHhhhccCCC----CeEEEEECC---HHHHHHHHHHHHHHHHhC---CcH----
Confidence 111123222 4446679999988777643322111 112444432 244444444443221000 111
Q ss_pred cCCCCCCccccccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEecCHHHHHHHHHhcCcceEEEcCCCCC---------
Q 005074 584 QIPETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRF--------- 654 (715)
Q Consensus 584 pv~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~i~t~d~~~~~~~~~~l~~G~V~iN~~~~~--------- 654 (715)
.+.++. ..---.|+-++|+|||++++|..- +--.-|.++|... .+.+--.+|.|++-..+..
T Consensus 266 -----~~~~~~-~~~~g~ii~~~~~~eai~~~N~~A-PEHLel~~~~~~~--~l~~i~nAGsiFlG~~tp~a~GDY~aGp 336 (390)
T cd06572 266 -----EIAAKS-LLDYGAIILVDDLEEAIELANEYA-PEHLELQTEDPEE--LLEKIRNAGSIFLGPYTPEALGDYAAGP 336 (390)
T ss_pred -----HHHHHH-HHhCCEEEEECCHHHHHHHHHhhc-hhhheeHhcCHHH--HHhhCccceEEeecCCCchhhhccccCC
Confidence 011111 111123567899999999999975 4456788899865 2333457899999875532
Q ss_pred CCCCccCCcccccccccccccccccccccceEEEEEEE
Q 005074 655 CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILR 692 (715)
Q Consensus 655 ~~~~pfG~g~~sG~~~~~~~~~g~~gl~~ft~~K~v~~ 692 (715)
.+-+|-+ |.. +..|..++..|...-++..
T Consensus 337 NHvLPT~-----G~A----r~~sgL~v~~F~K~~s~~~ 365 (390)
T cd06572 337 NHVLPTG-----GTA----RFYSGLSVDDFLKRITVQE 365 (390)
T ss_pred CCccCCC-----cce----eecCCCCHHHheecceeEE
Confidence 1112222 221 2346677788887766544
No 225
>PRK00877 hisD bifunctional histidinal dehydrogenase/ histidinol dehydrogenase; Reviewed
Probab=94.93 E-value=7.6 Score=43.01 Aligned_cols=281 Identities=17% Similarity=0.188 Sum_probs=148.6
Q ss_pred HHHHHHHHHHHHhcccccccccccccccCCCeEEEEeeeceeEEEEEcCC----ChhhHHHHHHHHHHhCCEEE--EeCC
Q 005074 363 KISSLAKSIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES----RPDALVQIASLAIRSGNGLL--LKGG 436 (715)
Q Consensus 363 ~i~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~----~P~~~~~~~~~ALaaGN~vv--lKps 436 (715)
-++.+.++++.+.....+..... ...+|.....++.|+--|++..|. ||-..++.+.||-.||+.=| .-|.
T Consensus 84 ai~~A~~~I~~Fh~~q~~~~~~~---~~~~Gv~~g~~~~Pi~~vG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp 160 (425)
T PRK00877 84 ALEEAAENIRAFHEAQKPESWDV---ETAPGVRLGQRWRPIERVGLYVPGGKAAYPSSVLMNAIPAKVAGVKEIVMVTPP 160 (425)
T ss_pred HHHHHHHHHHHHHHHhCCCCeEE---EecCCeEEEEEEEehHHeEEEccCCCCCchHHHHHhhcchhhcCCCeEEEEeCC
Confidence 45566666776653322211111 113466677889999999999994 56556677889999997644 4454
Q ss_pred c---chHHHHHHHHHHHHHhcccccCcCceEEec-Ccch-hhHh---hcCCCCccEEEeecCHHH--HHHHHhh-cCCCE
Q 005074 437 K---EAMRSNAILHKVITSAIPDTVGEKLIGLVT-SREE-IPDL---LKLDDVIDLVIPRGSNKL--VSQIKES-TKIPV 505 (715)
Q Consensus 437 ~---~tp~t~~~l~~~~~~al~~alP~gvv~vv~-~~~~-~~~~---l~~~~~v~~v~fTGS~~~--g~~i~~~-a~~~~ 505 (715)
. -.|.+- ..+++ .|+=.+.. |+.. ++++ -.+=|+||+|+=-|..=| +|+.... .+.-.
T Consensus 161 ~~g~i~p~vL-~AA~~----------~Gv~eIy~vGGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~g~V~ID~ 229 (425)
T PRK00877 161 PDGEINPAIL-AAAAL----------AGVDEVYKVGGAQAIAALAYGTESIPKVDKIVGPGNIYVTAAKRLVFGVVGIDM 229 (425)
T ss_pred CCCCCCHHHH-HHHHH----------cCCCeeeccCCHHHHHHHHcCCCCCCCCcEEECCCcHHHHHHHHHHcCCcCcCC
Confidence 2 233221 11122 24445554 5433 3332 134578999998887543 3443221 11111
Q ss_pred EEecCCcce--EEEcCCCCHHHHHHHHHhhccCCCccccccceEEEc--CcccCchhHHHHHHHHHhcCCeEecCccccc
Q 005074 506 LGHADGICH--VYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVH--KDLACNGALNELVVELQHEGVGLFGGPRASK 581 (715)
Q Consensus 506 ~lElGGk~p--~iV~~dADl~~A~~~iv~~~f~n~g~C~a~~rv~V~--~~i~d~~f~~~l~~~~~~~~~~~~g~~~~~~ 581 (715)
+-|-+= +|-|++||.+..+..++.=+=.... ..-++|. +++. ++..+.+.++++.+ ++. .
T Consensus 230 ---~AGPSEvlViAD~~Anp~~vAaDLLaQAEHd~~----a~aiLvT~s~~la-~~V~~~v~~ql~~l-------~r~-~ 293 (425)
T PRK00877 230 ---IAGPSEILVIADETADPDFVAADLLSQAEHDPD----AQSILVTTSEELA-EAVAAEVERQLATL-------PRA-E 293 (425)
T ss_pred ---CCCCceeEEEeCCCCCHHHHHHHHHHHhccCCC----CcEEEEECCHHHH-HHHHHHHHHHHHhC-------ChH-H
Confidence 123332 3445669999988877653322111 1123443 3334 34433443333322 110 0
Q ss_pred cccCCCCCCccccccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEecCHHHHHHHHHhcCcceEEEcCCCCC--CC---
Q 005074 582 LLQIPETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRF--CD--- 656 (715)
Q Consensus 582 ~~pv~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~i~t~d~~~~~~~~~~l~~G~V~iN~~~~~--~~--- 656 (715)
+. ...+ |-||= |+-++|+|||++++|... +--..|.++|.... +.+=-.+|.|++-..+.. .+
T Consensus 294 ia----~~sl--~~~g~---iivv~~leeai~~~N~~A-PEHLel~~~~p~~~--l~~I~nAGaiFlG~~tp~a~GDY~a 361 (425)
T PRK00877 294 IA----RASL--EGQGA---IILVDDLEEAIELSNAYA-PEHLEIQTEDPRAL--LDRIRNAGAIFLGPYTPESLGDYAA 361 (425)
T ss_pred HH----HHHH--HhCCE---EEEECCHHHHHHHHHhhC-hHheeehhCCHHHH--HhhcCccceeccCCCCchhhhhccc
Confidence 00 0011 22454 467899999999999975 33566889998542 233457899999765432 11
Q ss_pred --CCccCCcccccccccccccccccccccceEEEEEEE
Q 005074 657 --GARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILR 692 (715)
Q Consensus 657 --~~pfG~g~~sG~~~~~~~~~g~~gl~~ft~~K~v~~ 692 (715)
+.-++. +|.. +..|.-++..|...-++..
T Consensus 362 GpNHvLPT---~G~A----R~~sgLsV~~F~K~~s~~~ 392 (425)
T PRK00877 362 GPNHVLPT---SGTA----RFSSGLSVYDFLKRSSVIE 392 (425)
T ss_pred CCCcccCC---Ccce----eecCCccHHHhccceeEEE
Confidence 111111 1221 2346678888887766544
No 226
>TIGR00069 hisD histidinol dehydrogenase. This model describes a polypeptide sequence catalyzing the final step in histidine biosynthesis, found sometimes as an independent protein and sometimes as a part of a multifunctional protein.
Probab=94.71 E-value=4.2 Score=44.49 Aligned_cols=250 Identities=18% Similarity=0.197 Sum_probs=136.8
Q ss_pred CCeEEEEeeeceeEEEEEcCC----ChhhHHHHHHHHHHhCCEEE--EeCCc----chHHHHHHHHHHHHHhcccccCcC
Q 005074 392 DGLILEKTSCPLGVLLIVFES----RPDALVQIASLAIRSGNGLL--LKGGK----EAMRSNAILHKVITSAIPDTVGEK 461 (715)
Q Consensus 392 ~~~~~~~~~~PlGVV~~I~p~----~P~~~~~~~~~ALaaGN~vv--lKps~----~tp~t~~~l~~~~~~al~~alP~g 461 (715)
+|.....++.|+--|++..|. +|-..++.+.||-.||+.=| .-|.. -.|.+- ..+++ .|
T Consensus 78 ~Gv~~g~~~~Pi~rvGlYVPGG~a~~pStvLM~aiPAkvAGV~~Iv~~TPp~~~g~i~p~iL-~AA~~----------~G 146 (393)
T TIGR00069 78 PGVILGQRVRPLERVGLYVPGGRAPYPSTVLMTAIPAKVAGVKEIVVCTPPGKDGKINPAVL-AAAKL----------AG 146 (393)
T ss_pred CCeEEEEEEEEeheEEEEeCCCCCcchHHHHHhhcchhhcCCCeEEEEeCCCcCCCCCHHHH-HHHHH----------cC
Confidence 566777889999999999994 55555677789999998644 44542 133321 11222 24
Q ss_pred ceEEec-Ccch-hhHh---hcCCCCccEEEeecCHHH--HHHHHhh-cCCCEEEecCCcce--EEEcCCCCHHHHHHHHH
Q 005074 462 LIGLVT-SREE-IPDL---LKLDDVIDLVIPRGSNKL--VSQIKES-TKIPVLGHADGICH--VYVDKSANLDVAKNIVI 531 (715)
Q Consensus 462 vv~vv~-~~~~-~~~~---l~~~~~v~~v~fTGS~~~--g~~i~~~-a~~~~~lElGGk~p--~iV~~dADl~~A~~~iv 531 (715)
+=.+.. |+.. ++++ -.+=|+||+|+=-|..-| +|+.... .+.- -+-|-+= +|-|++||.+.++..++
T Consensus 147 v~eIy~vGGAQAIAAlAyGTesIp~VDkIvGPGN~yV~~AK~~v~g~V~ID---~~AGPSEvlViAD~~Anp~~iAaDLL 223 (393)
T TIGR00069 147 VDEVYKVGGAQAIAALAYGTETVPKVDKIVGPGNIYVTAAKKLVFGDVGID---MPAGPSEVLVIADETANPEFVAADLL 223 (393)
T ss_pred CCeehhcCCHHHHHHHHcCCCCCCCCcEEECCCcHHHHHHHHHhcCccCcC---CCCCCceEEEEeCCCCCHHHHHHHHH
Confidence 445554 5432 3322 134578999998887543 3332211 1111 1123332 44466799999888776
Q ss_pred hhccCCCccccccceEEEc--CcccCchhHHHHHHHHHhcCCeEecCccccccccCCCCCCccc--cccCceEEEEEeCC
Q 005074 532 DAKIDYPAACNAMETLLVH--KDLACNGALNELVVELQHEGVGLFGGPRASKLLQIPETRLFHH--EYNSMVCTVEIVDD 607 (715)
Q Consensus 532 ~~~f~n~g~C~a~~rv~V~--~~i~d~~f~~~l~~~~~~~~~~~~g~~~~~~~~pv~~~~~~~e--E~FGPVl~v~~~~~ 607 (715)
.=+=.... ..-++|. +++. ++..+.+...++.+ ++. .+.++ +-+|= |+-++|
T Consensus 224 aQAEHd~~----a~~iLvT~s~~la-~~V~~~v~~ql~~l-------~r~---------~i~~~al~~~g~---ii~v~~ 279 (393)
T TIGR00069 224 SQAEHDPD----AQAILVTTSEELA-EAVQEEIERQLATL-------PRR---------EIARKSLEDNGA---IILVDD 279 (393)
T ss_pred HHhccCCC----CcEEEEECCHHHH-HHHHHHHHHHHHhC-------ChH---------HHHHHHHHhCCE---EEEECC
Confidence 53322111 1123443 3344 34444444444432 110 01111 11443 467899
Q ss_pred HHHHHHHHHhcCCCceeEEEecCHHHHHHHHHh-cCcceEEEcCCCCC--CC-------CCccCCccccccccccccccc
Q 005074 608 VRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQ-VDSAAVFHNASTRF--CD-------GARFGLGAEVGISTSRIHARG 677 (715)
Q Consensus 608 ~deAi~~aN~~~~GL~a~i~t~d~~~~~~~~~~-l~~G~V~iN~~~~~--~~-------~~pfG~g~~sG~~~~~~~~~g 677 (715)
+|||++++|..- +--.-|.++|... +..+ -.+|.|++-..+.. .+ -+|=+ |.. +..|
T Consensus 280 l~ea~~~~N~~A-PEHLel~~~~p~~---~l~~I~nAGaiFlG~~tp~a~GDY~aG~NHvLPT~-----G~A----r~~s 346 (393)
T TIGR00069 280 LEEAIEISNDYA-PEHLELQTKNPEE---LLPKIRNAGSIFLGPYTPEAAGDYAAGPNHVLPTG-----GTA----RFYS 346 (393)
T ss_pred HHHHHHHHHhhC-hHhheehhCCHHH---HHhhcCccceeccCCCCchhhhhccCCCCcccCCC-----cce----eecC
Confidence 999999999975 3345688888754 4433 56899999765432 11 11211 111 2346
Q ss_pred ccccccceEEEEEEE
Q 005074 678 PVGVEGLLTTRWILR 692 (715)
Q Consensus 678 ~~gl~~ft~~K~v~~ 692 (715)
.-++..|...-++..
T Consensus 347 gL~v~~F~K~~s~~~ 361 (393)
T TIGR00069 347 GLSVLDFLKRITVQR 361 (393)
T ss_pred CccHHHhccceeEEE
Confidence 677788877666544
No 227
>PLN02926 histidinol dehydrogenase
Probab=94.64 E-value=9 Score=42.50 Aligned_cols=280 Identities=15% Similarity=0.128 Sum_probs=148.7
Q ss_pred HHHHHHHHHHHHhcccccccccccccccCCCeEEEEeeeceeEEEEEcCC----ChhhHHHHHHHHHHhCCE--EEEeCC
Q 005074 363 KISSLAKSIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES----RPDALVQIASLAIRSGNG--LLLKGG 436 (715)
Q Consensus 363 ~i~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~----~P~~~~~~~~~ALaaGN~--vvlKps 436 (715)
-++.+.++++.+.....+... ... ...+|.....++.|+.-|++..|. +|-..++.+.||-.||+. |+.-|.
T Consensus 83 ai~~A~~nI~~fh~~q~~~~~-~~~-~~~~Gv~~g~~~~Pi~rvG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp 160 (431)
T PLN02926 83 AFDVAYDNIYAFHLAQKSTEK-LEV-ETMPGVRCRRVARPIGAVGLYVPGGTAVLPSTALMLAVPAQIAGCKTVVLATPP 160 (431)
T ss_pred HHHHHHHHHHHHHHHhCCCCc-ceE-ecCCCeEEEEEEechHHeeEeccCCCCCccHHHHHhhcchhhcCCCeEEEEECC
Confidence 355566666666533222111 000 012466677889999999999994 555566778899999976 444455
Q ss_pred cc----hHHHHHHHHHHHHHhcccccCcCceEEec-Ccch-hhHh---hcCCCCccEEEeecCHHH--HHHHHhhcCCC-
Q 005074 437 KE----AMRSNAILHKVITSAIPDTVGEKLIGLVT-SREE-IPDL---LKLDDVIDLVIPRGSNKL--VSQIKESTKIP- 504 (715)
Q Consensus 437 ~~----tp~t~~~l~~~~~~al~~alP~gvv~vv~-~~~~-~~~~---l~~~~~v~~v~fTGS~~~--g~~i~~~a~~~- 504 (715)
.. .|.+- .-+++ .|+=.+.. |+.. ++++ ..+=|+||+|+=-|..-| +|+... +.+
T Consensus 161 ~~~g~i~p~iL-~AA~~----------~Gv~eIy~vGGaQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~--G~~~ 227 (431)
T PLN02926 161 RKDGSICPEVL-YCAKK----------AGVTHILKAGGAQAIAAMAWGTDSCPKVDKIFGPGNQYVTAAKMILQ--NSEA 227 (431)
T ss_pred CcCCCCCHHHH-HHHHH----------cCCCeeeccCCHHHHHHHHcCCCCCCCCCEEECCCcHHHHHHHHHhh--CCCC
Confidence 32 33221 11121 24445554 5432 3332 123478999998887643 333211 220
Q ss_pred -E-EEecCCcce--EEEcCCCCHHHHHHHHHhhccCCCccccccceEEEcC--cccCchhHHHHHHHHHhcCCeEecCcc
Q 005074 505 -V-LGHADGICH--VYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHK--DLACNGALNELVVELQHEGVGLFGGPR 578 (715)
Q Consensus 505 -~-~lElGGk~p--~iV~~dADl~~A~~~iv~~~f~n~g~C~a~~rv~V~~--~i~d~~f~~~l~~~~~~~~~~~~g~~~ 578 (715)
| +=-+-|-+= +|-|++||.+.++..++.=+=.... ..-++|.. ++. ++..+.+.+.++.+ ++
T Consensus 228 ~VgID~~AGPSEvlIiAD~tA~p~~vAaDLLaQAEHdp~----a~aiLvT~s~~la-~~V~~~v~~ql~~l-------~r 295 (431)
T PLN02926 228 MVSIDMPAGPSEVLVIADKTANPVHVAADLLSQAEHGPD----SQVVLVAVGDVDL-DAIEEEVEKQCQSL-------PR 295 (431)
T ss_pred ccccCCCCCCceeEEEeCCCCCHHHHHHHHHHHhccCCC----CcEEEEECCHHHH-HHHHHHHHHHHHhC-------Ch
Confidence 1 111223333 3445669999988877653322111 11234433 333 34444443334332 11
Q ss_pred ccccccCCCCCCccccccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEecCHHHHHHHHHhcCcceEEEcCCCCC--CC
Q 005074 579 ASKLLQIPETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRF--CD 656 (715)
Q Consensus 579 ~~~~~pv~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~i~t~d~~~~~~~~~~l~~G~V~iN~~~~~--~~ 656 (715)
. .+. ++-+.- -.|+-++|+|||++++|..- +--.-|.++|.... +.+=-.+|.|++-..+.. .+
T Consensus 296 ~---------~i~-~~sl~~-g~iivv~~l~ea~~~~N~~A-PEHLei~~~~~~~~--l~~i~nAGaiFlG~~sp~a~GD 361 (431)
T PLN02926 296 G---------EIA-SKALGH-SFIVVARDMAEAISFSNLYA-PEHLIVNVEDAESW--LDKIDNAGSVFLGRWTPESVGD 361 (431)
T ss_pred H---------HHH-HHHHHC-CEEEEECCHHHHHHHHHhhC-hHhheehhcCHHHH--HhhcCccceeccCCCCchhhhc
Confidence 0 011 222222 45678999999999999975 33456888987543 233357899999764431 11
Q ss_pred -------CCccCCcccccccccccccccccccccceEEEEEEE
Q 005074 657 -------GARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILR 692 (715)
Q Consensus 657 -------~~pfG~g~~sG~~~~~~~~~g~~gl~~ft~~K~v~~ 692 (715)
-+|=+ |.. +..|.-++..|...-++..
T Consensus 362 Y~aGpNHvLPT~-----G~A----R~~sgLsv~~FlK~~s~~~ 395 (431)
T PLN02926 362 YASGTNHVLPTY-----GYA----RMYGGVSLDSFLKYMTVQS 395 (431)
T ss_pred cccCcCcccCCC-----cce----eecCCCcHHHhcceeeEEE
Confidence 11211 111 2346677788887665544
No 228
>PRK12447 histidinol dehydrogenase; Reviewed
Probab=94.38 E-value=10 Score=42.01 Aligned_cols=282 Identities=16% Similarity=0.149 Sum_probs=146.5
Q ss_pred HHHHHHHHHHHHhcccccccccccccccCCCeEEEEeeeceeEEEEEcCC----ChhhHHHHHHHHHHhCCEEEE--eCC
Q 005074 363 KISSLAKSIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES----RPDALVQIASLAIRSGNGLLL--KGG 436 (715)
Q Consensus 363 ~i~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~----~P~~~~~~~~~ALaaGN~vvl--Kps 436 (715)
-++.+.++++.+-....+....... ...+|.....++.|+--|++..|- +|-..++.+.||-.||+.=|+ -|.
T Consensus 77 ai~~A~~nI~~fh~~q~~~~~~~~~-~~~~Gv~~g~~~~Pl~rvG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp 155 (426)
T PRK12447 77 DIRFAQDQVRRFAEAQRDSLQDLEV-ETLPGVILGHRNIPVNSVGCYVPGGRYPLVASAHMSVLTAKVAGVKRVIACTPP 155 (426)
T ss_pred HHHHHHHHHHHHHHHhcCCCCceEE-ecCCCeEEEEEEeehheEEEEeCCCCCcchHHHHHhhcchhhcCCCeEEEEeCC
Confidence 4556666666664322221100100 112466677889999999999993 565566778899999986444 454
Q ss_pred cc---hHHHHHHHHHHHHHhcccccCcCceEEec-Ccc-hhhHh---hcCCCCccEEEeecCHHH--HHHHHhh-cCCCE
Q 005074 437 KE---AMRSNAILHKVITSAIPDTVGEKLIGLVT-SRE-EIPDL---LKLDDVIDLVIPRGSNKL--VSQIKES-TKIPV 505 (715)
Q Consensus 437 ~~---tp~t~~~l~~~~~~al~~alP~gvv~vv~-~~~-~~~~~---l~~~~~v~~v~fTGS~~~--g~~i~~~-a~~~~ 505 (715)
.. .|.+- ..+++ .|+=.+.. |+. .++++ -.+=|+||+|+=-|..-| +|+.... .+.-.
T Consensus 156 ~~~~i~p~iL-~Aa~~----------~Gv~eIy~vGGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~g~V~ID~ 224 (426)
T PRK12447 156 FPGEPPPAIV-AAMHL----------AGADEIYVLGGVQAVAAMAYGTETIKPVDMLVGPGNAYVAEAKRQLFGRVGIDL 224 (426)
T ss_pred CCCCCCHHHH-HHHHH----------cCCCeehhcCCHHHHHHHHcCCCCCCCCcEEECCCcHHHHHHHHHhcCccCcCC
Confidence 32 23221 11121 24445554 543 23322 134578999998887643 3332211 11111
Q ss_pred EEecCCcce--EEEcCCCCHHHHHHHHHhhccCCCccccccceEEEc--CcccCchhHHHHHHHHHhcCCeEecCccccc
Q 005074 506 LGHADGICH--VYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVH--KDLACNGALNELVVELQHEGVGLFGGPRASK 581 (715)
Q Consensus 506 ~lElGGk~p--~iV~~dADl~~A~~~iv~~~f~n~g~C~a~~rv~V~--~~i~d~~f~~~l~~~~~~~~~~~~g~~~~~~ 581 (715)
+-|-+= +|-|++||.+..+..++.=+=.... ..-++|. +++. ++..+.+.+.++.+ ++..
T Consensus 225 ---~AGPSEvlViAD~~Anp~~vAaDLLaQAEHd~~----a~~iLvT~s~~la-~~V~~~v~~ql~~l-------~r~~- 288 (426)
T PRK12447 225 ---FAGPTETLVIADDTADPELVATDLLGQAEHGPN----SPAVLITTSRKLA-EEVLAEIERLLAIL-------PTAD- 288 (426)
T ss_pred ---CCCCceeEEEeCCCCCHHHHHHHHHHHhccCCC----CceEEEECCHHHH-HHHHHHHHHHHHhC-------CHHH-
Confidence 123322 4446679999988777653322211 1123443 3344 34444443334332 1100
Q ss_pred cccCCCCCCccccccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEecCHHHHHHHHHh-cCcceEEEcCCCCC--CC--
Q 005074 582 LLQIPETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQ-VDSAAVFHNASTRF--CD-- 656 (715)
Q Consensus 582 ~~pv~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~i~t~d~~~~~~~~~~-l~~G~V~iN~~~~~--~~-- 656 (715)
.. ...| |-+|= |+-++|+|||++++|..- +=-.-|.++|... +..+ -.+|.|++-..+.. .+
T Consensus 289 i~----~~sl--~~~g~---ii~v~~l~ea~~~~N~~A-PEHLel~~~~~~~---~l~~i~nAGaiFlG~~sp~a~GDY~ 355 (426)
T PRK12447 289 VA----SAAW--RDYGE---VILCDDLEEMVAEADRYA-SEHVQVMTEDPDW---FLENMTNYGALFLGERTNVAYGDKV 355 (426)
T ss_pred HH----HHHH--HhCCE---EEEECCHHHHHHHHHhhC-hHheeehhCCHHH---HHhhcCccceeccCCCCchhhhhcc
Confidence 00 0011 22443 467899999999999975 3345688888744 4443 56899999765431 11
Q ss_pred ---CCccCCcccccccccccccccccccccceEEEEEEE
Q 005074 657 ---GARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILR 692 (715)
Q Consensus 657 ---~~pfG~g~~sG~~~~~~~~~g~~gl~~ft~~K~v~~ 692 (715)
+.-++. +|.. +..|.-++..|...-++..
T Consensus 356 aGpNHvLPT---~G~A----r~~sgLsv~~FlK~~s~~~ 387 (426)
T PRK12447 356 IGTNHVLPT---SGAA----RYTGGLWVGKFLKTVTYQR 387 (426)
T ss_pred cCCCcccCC---Ccce----eecCCCcHHHhccceeEEE
Confidence 111111 1221 2346677788877665543
No 229
>PRK13770 histidinol dehydrogenase; Provisional
Probab=93.95 E-value=12 Score=41.26 Aligned_cols=277 Identities=11% Similarity=0.113 Sum_probs=146.5
Q ss_pred HHHHHHHHHHHHhcccccccccccccccCCCeEEEEeeeceeEEEEEcCC----ChhhHHHHHHHHHHhCCEEEEe--CC
Q 005074 363 KISSLAKSIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES----RPDALVQIASLAIRSGNGLLLK--GG 436 (715)
Q Consensus 363 ~i~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~----~P~~~~~~~~~ALaaGN~vvlK--ps 436 (715)
-++.+.++++.+.....+.. +....+.....++.|+--|++..|- +|-..++.+.||-.||+.=|+= |.
T Consensus 76 ai~~A~~nI~~fh~~q~~~~-----~~~~~gv~~g~~~~Pi~rvGlYVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp 150 (416)
T PRK13770 76 ALQQSYERIKAYQESIKQTN-----QQLEESVECYEIYHPLESVGIYVPGGKASYPSTVLMTATLAQVAGVENIVVVTPP 150 (416)
T ss_pred HHHHHHHHHHHHHHHhCCCC-----eEecCCcEEEEEEeeeeeeEEEccCCCCCccHHHHHhhccHhhcCCCeEEEEeCc
Confidence 45556666666643222211 1112455667788999999999993 5655667788999999875544 44
Q ss_pred cc---hHHHHHHHHHHHHHhcccccCcCceEEec-Ccch-hhHh---hcCCCCccEEEeecCHHH--HHHHHhh-cCCCE
Q 005074 437 KE---AMRSNAILHKVITSAIPDTVGEKLIGLVT-SREE-IPDL---LKLDDVIDLVIPRGSNKL--VSQIKES-TKIPV 505 (715)
Q Consensus 437 ~~---tp~t~~~l~~~~~~al~~alP~gvv~vv~-~~~~-~~~~---l~~~~~v~~v~fTGS~~~--g~~i~~~-a~~~~ 505 (715)
.. .|.+- ..+++ .|+=.+.. |+.. ++++ -.+=|+||+|+==|..-| +|+.... .+.-.
T Consensus 151 ~~~~i~p~iL-~Aa~~----------~Gv~eIy~iGGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~g~V~ID~ 219 (416)
T PRK13770 151 QPNGVSQEVL-AACYI----------TQVNQVFQVGGAQSIAALTYGTETIPKVDKIVGPGNQFVAYAKKYLFGQVGIDQ 219 (416)
T ss_pred CCCCCCHHHH-HHHHH----------cCCCeeeccCCHHHHHHHHcCCCCCCCCcEEECCCcHHHHHHHHHhcCCcCcCC
Confidence 32 33321 11222 24444554 5432 3322 124578999987777543 3332111 11111
Q ss_pred EEecCCcce--EEEcCCCCHHHHHHHHHhhccC--CCc-cccccceEEEcCcccCchhHHHHHHHHHhcCCeEecCcccc
Q 005074 506 LGHADGICH--VYVDKSANLDVAKNIVIDAKID--YPA-ACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRAS 580 (715)
Q Consensus 506 ~lElGGk~p--~iV~~dADl~~A~~~iv~~~f~--n~g-~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~~~~g~~~~~ 580 (715)
+-|-+= +|-|++||.+..+..++.=+=. +++ .+.+.+ +++. ++..+.+...++.+ ++.
T Consensus 220 ---~AGPSEvlViAD~~Anp~~iAaDLLaQAEHd~~a~~iLvT~s-----~~la-~~V~~ev~~ql~~l-------pr~- 282 (416)
T PRK13770 220 ---IAGPTEIALIIDETADLDAIVYDVFAQAEHDELARTYVISED-----AQVL-KDLESRIAKALPNV-------DRY- 282 (416)
T ss_pred ---CCCCceeEEEecCCCCHHHHHHHHHHHhccCCCCcEEEEeCC-----HHHH-HHHHHHHHHHHHhC-------ChH-
Confidence 123322 4446679999988777653322 233 322222 3444 34444444444432 110
Q ss_pred ccccCCCCCCccccccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEecCHHHHHHHHHh-cCcceEEEcCCCCC--CC-
Q 005074 581 KLLQIPETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQ-VDSAAVFHNASTRF--CD- 656 (715)
Q Consensus 581 ~~~pv~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~i~t~d~~~~~~~~~~-l~~G~V~iN~~~~~--~~- 656 (715)
.+. ...| |-|| .|+-++|+|||++++|..-- =-.-|.++|... +..+ -.+|.|++-..+.. .+
T Consensus 283 ~i~----~~al--~~~g---~ii~v~~~eeai~~~N~~AP-EHLel~~~~~~~---~l~~i~nAGaiFlG~~sp~a~GDY 349 (416)
T PRK13770 283 DIV----SKSI--ANQH---YLIHASNFDEACHVMNTIAP-EHASIQTVNPQP---YIEKVKYVGALFIGHYSPEVIGDY 349 (416)
T ss_pred HHH----HHHH--HhCC---EEEEECCHHHHHHHHHhhCh-HhheehhCCHHH---HHhhCCEeceeccCCCCchhhhcc
Confidence 000 0011 2244 34668999999999999753 345688898754 4444 46899999765532 11
Q ss_pred ----CCccCCcccccccccccccccccccccceEEEEEEE
Q 005074 657 ----GARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILR 692 (715)
Q Consensus 657 ----~~pfG~g~~sG~~~~~~~~~g~~gl~~ft~~K~v~~ 692 (715)
+.-++. +|.. +..|.-++..|...-++..
T Consensus 350 ~aGpNHvLPT---~G~A----R~~sgLsv~~FlK~~s~~~ 382 (416)
T PRK13770 350 VAGPSHVLPT---NRTA----RFTNGLSVNDFLTRNTVIH 382 (416)
T ss_pred ccCCCCcCCC---Ccce----eccCCCcHHHeecceeeEE
Confidence 111111 1211 2345667788887766544
No 230
>COG0141 HisD Histidinol dehydrogenase [Amino acid transport and metabolism]
Probab=92.79 E-value=6.2 Score=43.31 Aligned_cols=250 Identities=14% Similarity=0.180 Sum_probs=135.5
Q ss_pred HHHHHHHHHHHHhcccccccccccccccCCCeEEEEeeeceeEEEEEcC----CChhhHHHHHHHHHHhCCEEE--EeCC
Q 005074 363 KISSLAKSIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFE----SRPDALVQIASLAIRSGNGLL--LKGG 436 (715)
Q Consensus 363 ~i~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p----~~P~~~~~~~~~ALaaGN~vv--lKps 436 (715)
-++.++++++.+-....+.... ....+|.....++.|+--|++..| .||-..++...||-.+|+-=| .-|.
T Consensus 80 ai~~A~~~I~~fH~~Q~p~~~~---~~~~~Gv~~g~~~~Pi~~VGlYVPGG~A~ypStvLM~avPAkvAGv~~Iv~~tPp 156 (425)
T COG0141 80 ALEVAAENIEAFHEAQLPKDWL---VETEPGVVLGQRWRPIERVGLYVPGGKAAYPSTVLMNAVPAKVAGVEEIVVVTPP 156 (425)
T ss_pred HHHHHHHHHHHHHHhhCCCccc---eeccCCcEEEEEEEEhhheEEEccCCCcCChHHHHHhhccHhhcCCceEEEECCC
Confidence 3555666666653322221111 112356777788999999999999 267666677789999998644 3444
Q ss_pred cc---hHHHHHHHHHHHHHhcccccCcCceEEec-CcchhhHhhcC----CCCccEEEeecCHHH--HHHHHhhcCCCEE
Q 005074 437 KE---AMRSNAILHKVITSAIPDTVGEKLIGLVT-SREEIPDLLKL----DDVIDLVIPRGSNKL--VSQIKESTKIPVL 506 (715)
Q Consensus 437 ~~---tp~t~~~l~~~~~~al~~alP~gvv~vv~-~~~~~~~~l~~----~~~v~~v~fTGS~~~--g~~i~~~a~~~~~ 506 (715)
.. .|.+ +..++++ |+=.|.. |+...-++|.- =|.||+|+==|..-+ +|.....- .-+=
T Consensus 157 ~~~gv~p~i-L~AA~~~----------Gv~eIy~vGGAQAIAAlAYGTetV~~VdkIvGPGN~yVtaAKr~v~g~-V~ID 224 (425)
T COG0141 157 PKDGVNPEI-LAAARLA----------GVDEVYKVGGAQAIAALAYGTETVPKVDKIVGPGNAYVTAAKRLVSGV-VGID 224 (425)
T ss_pred CCCCCCHHH-HHHHHHh----------CcHHHHHccCHHHHHHHHccCCcCCccCeeeCCCcHHHHHHHHHhhCC-cccC
Confidence 43 3322 1222222 3333333 44332233332 267999988887643 33332211 1111
Q ss_pred EecCCcce-EEEcCCCCHHHHHHHHHhhccCCCccccccceEEEcCcccCchhHHHHHHHHHhcCCeEecCccccccccC
Q 005074 507 GHADGICH-VYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLQI 585 (715)
Q Consensus 507 lElGGk~p-~iV~~dADl~~A~~~iv~~~f~n~g~C~a~~rv~V~~~i~d~~f~~~l~~~~~~~~~~~~g~~~~~~~~pv 585 (715)
+..|=..- +|-|++||.+..+..++.-+=.... .+-++|..| ++|.+++.+++.+.-..+ ++. .
T Consensus 225 ~~AGPSEvlViAD~ta~p~~vA~DLLsQAEHd~~----a~aiLvT~s---~~la~~v~~~v~~~l~~l---~~~-e---- 289 (425)
T COG0141 225 MIAGPSEVLVIADETANPDFVAADLLSQAEHDPD----AQAILVTDS---EELAEAVEAAVERQLETL---PRA-E---- 289 (425)
T ss_pred CCCCCceEEEEeCCCCCHHHHHHHHHHHhhcCCC----ceEEEEeCc---HHHHHHHHHHHHHHHHhc---cHH-H----
Confidence 12221222 4446669999988877653332211 123555543 345555555444321000 110 0
Q ss_pred CCCCCccc--cccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEecCHHHHHHHHHh-cCcceEEEcCCCC
Q 005074 586 PETRLFHH--EYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQ-VDSAAVFHNASTR 653 (715)
Q Consensus 586 ~~~~~~~e--E~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~i~t~d~~~~~~~~~~-l~~G~V~iN~~~~ 653 (715)
+..+ +-|| .|+-++|+|||++++|... +--.-|.++|... +..+ -.+|.|++...+.
T Consensus 290 ----i~~~~l~~~g---~iilv~~l~ea~~~~N~~A-PEHLei~~~~p~~---~l~~I~nAGsIFlG~~sP 349 (425)
T COG0141 290 ----IARKALENYG---AIILVDDLDEAVEISNEYA-PEHLELQTENPRE---LLGKIRNAGSIFLGHYSP 349 (425)
T ss_pred ----HHHHHHHhCC---eEEEECCHHHHHHHHHhhC-hHhhhhhhcCHHH---HHHHhcccceeeecCCCC
Confidence 1000 1233 4677899999999999975 4566788999764 4444 4689999998654
No 231
>PRK13769 histidinol dehydrogenase; Provisional
Probab=92.41 E-value=19 Score=39.16 Aligned_cols=213 Identities=14% Similarity=0.047 Sum_probs=118.0
Q ss_pred CCeEEEEeeeceeEEEEEcCC-ChhhHHHHHHHHHHhCCEEEEe--CCc-chHHHHHHHHHHHHHhcccccCcCceEEec
Q 005074 392 DGLILEKTSCPLGVLLIVFES-RPDALVQIASLAIRSGNGLLLK--GGK-EAMRSNAILHKVITSAIPDTVGEKLIGLVT 467 (715)
Q Consensus 392 ~~~~~~~~~~PlGVV~~I~p~-~P~~~~~~~~~ALaaGN~vvlK--ps~-~tp~t~~~l~~~~~~al~~alP~gvv~vv~ 467 (715)
+|.....++.|+--|++..|. +|-..++.+.||-.||+.=|+= |.. -.|.+ +..+++ .|+=.+..
T Consensus 83 ~Gv~~g~~~~Pi~rvG~YVPa~~pStvLM~~iPAkvAGV~~Iv~~TPp~~i~p~v-L~aa~~----------~Gv~eIy~ 151 (368)
T PRK13769 83 GGVLRSVFWKPVRRAALYVPARYVSTLVMLAVPARAAGVEEIYVVTPPRGVTGEL-LAVAKE----------LGVKGVLA 151 (368)
T ss_pred CCeEEEEEEeeeeeeEEEeccchHHHHHHhhccHhhcCCCeEEEeCCCCCCCHHH-HHHHHH----------cCCCeeec
Confidence 566777889999999999995 4555667788999999865544 432 22321 111122 24445555
Q ss_pred -CcchhhHhhcCCCCccEEEeecCHHH--HHHHHhh-cCCCEEEecCCcceEEEcCCCCHHHHHHHHHhhccCCCccccc
Q 005074 468 -SREEIPDLLKLDDVIDLVIPRGSNKL--VSQIKES-TKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNA 543 (715)
Q Consensus 468 -~~~~~~~~l~~~~~v~~v~fTGS~~~--g~~i~~~-a~~~~~lElGGk~p~iV~~dADl~~A~~~iv~~~f~n~g~C~a 543 (715)
|+...-+++..--+||+|+=-|..-| +|+.... .+.- +--|=..-+|+.++||.+..+..++.=+=....
T Consensus 152 vGGAQAIAa~a~gt~VDkIvGPGN~yV~~AK~~v~g~V~ID--~~AGPSEvlViAD~a~p~~vAaDLLaQAEH~~~---- 225 (368)
T PRK13769 152 IGGPHGLAYAVFHMGVDMVAGPGGLYVQAAKYVLSQYVGID--GIEGPTELVVYAEGVPPEVAVRGALAQLEHGPT---- 225 (368)
T ss_pred ccCHHHHHHHhcCCCcCEEECCCcHHHHHHHHHHhCCcCCC--CcCCCcceEEEcCCCCHHHHHHHHHHHhhcCCC----
Confidence 54332223333337999998888643 3332211 1111 112223336666679999877777643221110
Q ss_pred cceEEEcCcccCchhHHHHHHHHHhcCCeEecCccccccccCCCCCCccccccCceEEEEEeCCHHHHHHHHHhcCCCce
Q 005074 544 METLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLQIPETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHT 623 (715)
Q Consensus 544 ~~rv~V~~~i~d~~f~~~l~~~~~~~~~~~~g~~~~~~~~pv~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~ 623 (715)
..-++|..+ .++.+++.+++++.-. + ..|- ..|+-++|+|||++++|...- --
T Consensus 226 a~~iLvT~s---~~la~~V~~~v~~~~~---------------------~-~~~~-~~iivv~~leeai~~~N~~AP-EH 278 (368)
T PRK13769 226 SFAYLLSTD---AELLKAAEEIYRRERT---------------------S-SMGP-LEVRKVAGVEEAVRFIDEIAP-EH 278 (368)
T ss_pred CcEEEEECC---HHHHHHHHHHHHHHHH---------------------h-cCCC-CeEEEECCHHHHHHHHHhhCh-Hh
Confidence 112344333 2555556555554200 0 1221 346788999999999999642 23
Q ss_pred eEEEecCHHHHHHHHHhcCcceEEEcCCC
Q 005074 624 DCIVAEDQKVAETFLCQVDSAAVFHNAST 652 (715)
Q Consensus 624 a~i~t~d~~~~~~~~~~l~~G~V~iN~~~ 652 (715)
..|.+.+ . .+.+=-.+|.|+++.+.
T Consensus 279 Lel~~~~-~---~~~~i~nAGsiFl~~p~ 303 (368)
T PRK13769 279 LEVWGRR-E---VAYRVRNVGAVSVNMPS 303 (368)
T ss_pred eEeeCcH-H---HHhhCCccCChhcCCch
Confidence 3444422 2 22233568999996643
No 232
>PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed
Probab=81.63 E-value=3.4 Score=52.40 Aligned_cols=92 Identities=13% Similarity=0.103 Sum_probs=62.7
Q ss_pred CeEEEEeeeceeEEEEEcCCChhhHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccccCcCceEEecCcchh
Q 005074 393 GLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDTVGEKLIGLVTSREEI 472 (715)
Q Consensus 393 ~~~~~~~~~PlGVV~~I~p~~P~~~~~~~~~ALaaGN~vvlKps~~tp~t~~~l~~~~~~al~~alP~gvv~vv~~~~~~ 472 (715)
|......-.|.|+|+++.+... -....++.+|++||.+|+..++..+ +++. .||+.+.+.+.-. .
T Consensus 1178 GE~N~l~l~pRg~vLcl~~~~~-~~~~Ql~Aala~Gn~~v~~~~~~~~-------~~~~-----~Lp~~v~~~v~~~--~ 1242 (1318)
T PRK11809 1178 GERNTYTLLPRERVLCLADTEQ-DALTQLAAVLAVGSQALWPDDALHR-------ALVA-----ALPAAVQARIQLA--K 1242 (1318)
T ss_pred CCcceeeccCCCcEEEeCCCHH-HHHHHHHHHHHhCCEEEEeCCchhH-------HHHH-----hccHHHHhHhhhc--c
Confidence 4445566799999999987543 2455678899999999987555322 2332 2999998877411 1
Q ss_pred hHhhcCCCCccEEEeecCHHHHHHHHhh
Q 005074 473 PDLLKLDDVIDLVIPRGSNKLVSQIKES 500 (715)
Q Consensus 473 ~~~l~~~~~v~~v~fTGS~~~g~~i~~~ 500 (715)
...+ ....++.|.|-|.....+.+.++
T Consensus 1243 ~~~~-~~~~~~avl~~G~~~~l~~~~~~ 1269 (1318)
T PRK11809 1243 DWQL-ADQPFDAVLFHGDSDQLRALCEQ 1269 (1318)
T ss_pred cccc-ccCCccEEEEeCCHHHHHHHHHH
Confidence 1222 23569999999999877777544
No 233
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=69.10 E-value=21 Score=34.02 Aligned_cols=58 Identities=28% Similarity=0.318 Sum_probs=36.0
Q ss_pred EEeccCCccccCCCCCcCccccceeeccchhhHHhcCCCCCcccCChHHHHHHHHHHHHcCCcEEEEeCCCcchHHH
Q 005074 193 VLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIK 269 (715)
Q Consensus 193 i~lTDVdGV~~~dP~~p~a~~i~~is~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a~~~gv~v~I~~g~~~~~l~~ 269 (715)
++++|||||+++ ++++=.-+-+|.. .+ .+..|+--| ...+.|+++-|+.|+....+..
T Consensus 10 Lli~DVDGvLTD------G~ly~~~~Gee~K---aF-----nv~DG~Gik-----~l~~~Gi~vAIITGr~s~ive~ 67 (170)
T COG1778 10 LLILDVDGVLTD------GKLYYDENGEEIK---AF-----NVRDGHGIK-----LLLKSGIKVAIITGRDSPIVEK 67 (170)
T ss_pred EEEEeccceeec------CeEEEcCCCceee---ee-----eccCcHHHH-----HHHHcCCeEEEEeCCCCHHHHH
Confidence 456899999997 5443332233332 23 234554444 5667899999999988765543
No 234
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=54.03 E-value=64 Score=31.22 Aligned_cols=66 Identities=15% Similarity=0.238 Sum_probs=38.8
Q ss_pred EEeccCCccccCCC--CCcCccccceeeccchhhHHhcCCCCCcccCChHHHHHHHHHHHHcCCcEEEEeCCCcchHHHH
Q 005074 193 VLLSDVEGLYSGPP--SEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKV 270 (715)
Q Consensus 193 i~lTDVdGV~~~dP--~~p~a~~i~~is~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a~~~gv~v~I~~g~~~~~l~~~ 270 (715)
.+++|+|||+++.- -++++...+..+. ..|| +...+.+.|+++.|++++....+...
T Consensus 9 ~~v~d~dGv~tdg~~~~~~~g~~~~~~~~----------------~D~~-----~~~~L~~~Gi~laIiT~k~~~~~~~~ 67 (169)
T TIGR02726 9 LVILDVDGVMTDGRIVINDEGIESRNFDI----------------KDGM-----GVIVLQLCGIDVAIITSKKSGAVRHR 67 (169)
T ss_pred EEEEeCceeeECCeEEEcCCCcEEEEEec----------------chHH-----HHHHHHHCCCEEEEEECCCcHHHHHH
Confidence 46789999999842 1444433444333 2222 23345567999888887776666555
Q ss_pred HcCCcceeE
Q 005074 271 LEGKRVGTL 279 (715)
Q Consensus 271 ~tg~~iGT~ 279 (715)
+..-.+..+
T Consensus 68 l~~lgi~~~ 76 (169)
T TIGR02726 68 AEELKIKRF 76 (169)
T ss_pred HHHCCCcEE
Confidence 554444333
No 235
>PF13376 OmdA: Bacteriocin-protection, YdeI or OmpD-Associated
Probab=45.94 E-value=29 Score=27.58 Aligned_cols=34 Identities=15% Similarity=0.113 Sum_probs=31.1
Q ss_pred HhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 005074 290 QVGAREMAVAARESSRRLQALQSQDRRKILLDVA 323 (715)
Q Consensus 290 ~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a 323 (715)
++|+..+++.-..|...|..++...|..++..+.
T Consensus 7 P~dl~~aL~~~p~a~~~f~~l~~~~rr~~i~wi~ 40 (63)
T PF13376_consen 7 PEDLEAALEANPEAKEFFESLTPSYRREYIRWIN 40 (63)
T ss_pred CHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHH
Confidence 6899999999999999999999999999997775
No 236
>PF13714 PEP_mutase: Phosphoenolpyruvate phosphomutase; PDB: 1ZLP_A 3EOO_C 1UJQ_D 1O5Q_A 2DUA_A 2HJP_A 2HRW_A 2QIW_A 3KZ2_B 3IH1_B ....
Probab=43.78 E-value=29 Score=35.68 Aligned_cols=182 Identities=14% Similarity=0.123 Sum_probs=107.9
Q ss_pred HHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEEecCcchhhHhhcCCCCccEEEeecCHHHHHHHHhhcCC
Q 005074 425 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTKI 503 (715)
Q Consensus 425 LaaGN~vvlKps~~tp~t~~~l~~~~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~a~~ 503 (715)
|..++..++=|.-.-++|+..+.+ + ||. +-+++..+...+ --|+...+++|==....+.|.+....
T Consensus 4 L~~~~~~l~~p~~~D~~SAr~~e~--------~Gf~a----i~~sg~~~a~s~-G~pD~~~lt~~e~~~~~~~I~~~~~i 70 (238)
T PF13714_consen 4 LHEPGKPLVLPNVWDALSARLAER--------AGFDA----IATSGAGVAASL-GYPDGGLLTLTEMLAAVRRIARAVSI 70 (238)
T ss_dssp HHHSSSSEEEEEESSHHHHHHHHH--------TT-SE----EEEHHHHHHHHT-TS-SSS-S-HHHHHHHHHHHHHHSSS
T ss_pred hhcCCCcEEeCCCcCHHHHHHHHH--------cCCCE----EEechHHHHHHc-CCCCCCCCCHHHHHHHHHHHHhhhcC
Confidence 566766666688888888755433 4 554 222333344444 56788899888878888888777767
Q ss_pred CEEE--ecC-CcceEEEcCCCCHHHHHHHHHhhccC--C--Ccccc-ccceEEEcCcccCchhHHHHHHHHHhcCCeEec
Q 005074 504 PVLG--HAD-GICHVYVDKSANLDVAKNIVIDAKID--Y--PAACN-AMETLLVHKDLACNGALNELVVELQHEGVGLFG 575 (715)
Q Consensus 504 ~~~l--ElG-Gk~p~iV~~dADl~~A~~~iv~~~f~--n--~g~C~-a~~rv~V~~~i~d~~f~~~l~~~~~~~~~~~~g 575 (715)
|++. |.| |++|. ++...++....+... | =|.|. ..++++ ++ ++++++++...+...
T Consensus 71 Pv~vD~d~GyG~~~~------~v~~tv~~~~~aG~agi~IEDq~~~~~~~~l~---~~--ee~~~kI~Aa~~a~~----- 134 (238)
T PF13714_consen 71 PVIVDADTGYGNDPE------NVARTVRELERAGAAGINIEDQRCGHGGKQLV---SP--EEMVAKIRAAVDARR----- 134 (238)
T ss_dssp EEEEE-TTTSSSSHH------HHHHHHHHHHHCT-SEEEEESBSTTTSTT-B-----H--HHHHHHHHHHHHHHS-----
T ss_pred cEEEEcccccCchhH------HHHHHHHHHHHcCCcEEEeeccccCCCCCcee---CH--HHHHHHHHHHHHhcc-----
Confidence 7764 444 44332 456677777664332 1 23565 333333 44 478888877766431
Q ss_pred CccccccccCCCCCCccccccCceEEEEEeCCHHHHHHHHHhcC-CCceeEEEe---cCHHHHHHHHHhcCcceEEEcC
Q 005074 576 GPRASKLLQIPETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHG-SAHTDCIVA---EDQKVAETFLCQVDSAAVFHNA 650 (715)
Q Consensus 576 ~~~~~~~~pv~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~-~GL~a~i~t---~d~~~~~~~~~~l~~G~V~iN~ 650 (715)
++ +++ -+.+.+.|.. ....+||||+.+|... -| +-.||- ++.+.++++.++++ +-+++|.
T Consensus 135 ~~---~~~-----I~ARTDa~~~-----~~~~~deaI~R~~aY~eAG-AD~ifi~~~~~~~~i~~~~~~~~-~Pl~v~~ 198 (238)
T PF13714_consen 135 DP---DFV-----IIARTDAFLR-----AEEGLDEAIERAKAYAEAG-ADMIFIPGLQSEEEIERIVKAVD-GPLNVNP 198 (238)
T ss_dssp ST---TSE-----EEEEECHHCH-----HHHHHHHHHHHHHHHHHTT--SEEEETTSSSHHHHHHHHHHHS-SEEEEET
T ss_pred CC---eEE-----EEEecccccc-----CCCCHHHHHHHHHHHHHcC-CCEEEeCCCCCHHHHHHHHHhcC-CCEEEEc
Confidence 11 111 1345555543 4467899999999864 45 566663 67778999999995 6677776
No 237
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=40.06 E-value=51 Score=30.32 Aligned_cols=47 Identities=32% Similarity=0.600 Sum_probs=31.6
Q ss_pred cceEEEEeCCcccccCCCccc-HHHHHHHHHHHHHHHHCCCeEEEEeC
Q 005074 14 VKRLVVKVGTAVVTRSDGRLA-LGRLGALLEQLKELNSQGFEIILVSS 60 (715)
Q Consensus 14 ~k~~VIKiGGs~l~~~~~~~~-~~~l~~l~~~I~~l~~~G~~vviVhG 60 (715)
+|.+++=+.|+++.+..+... ........+.+..+++.|++++++.|
T Consensus 1 ~K~i~~DiDGTL~~~~~~~y~~~~~~~~~ie~L~~l~~~G~~IiiaTG 48 (126)
T TIGR01689 1 MKRLVMDLDNTITLTENGDYANVAPILAVIEKLRHYKALGFEIVISSS 48 (126)
T ss_pred CCEEEEeCCCCcccCCCCcccccccCHHHHHHHHHHHHCCCEEEEECC
Confidence 378999999999875432111 01124566778888889999877764
No 238
>PF10686 DUF2493: Protein of unknown function (DUF2493); InterPro: IPR019627 This entry is represented by Mycobacteriophage D29, Gp61. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. Members of this family are mainly Proteobacteria. The function is not known.
Probab=39.03 E-value=76 Score=26.00 Aligned_cols=44 Identities=23% Similarity=0.306 Sum_probs=26.8
Q ss_pred ceEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCCh-hHhhH
Q 005074 15 KRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGA-VGVGR 67 (715)
Q Consensus 15 k~~VIKiGGs~l~~~~~~~~~~~l~~l~~~I~~l~~~G~~vviVhGgg-~~i~~ 67 (715)
.+.|+=-||...+|. ..+.+.+..++..--.++|||||. ...+.
T Consensus 3 g~rVli~GgR~~~D~---------~~i~~~Ld~~~~~~~~~~lvhGga~~GaD~ 47 (71)
T PF10686_consen 3 GMRVLITGGRDWTDH---------ELIWAALDKVHARHPDMVLVHGGAPKGADR 47 (71)
T ss_pred CCEEEEEECCccccH---------HHHHHHHHHHHHhCCCEEEEECCCCCCHHH
Confidence 355666788888763 234444444444334688999998 44444
No 239
>cd01390 HMGB-UBF_HMG-box HMGB-UBF_HMG-box, class II and III members of the HMG-box superfamily of DNA-binding proteins. These proteins bind the minor groove of DNA in a non-sequence specific fashion and contain two or more tandem HMG boxes. Class II members include non-histone chromosomal proteins, HMG1 and HMG2, which bind to bent or distorted DNA such as four-way DNA junctions, synthetic DNA cruciforms, kinked cisplatin-modified DNA, DNA bulges, cross-overs in supercoiled DNA, and can cause looping of linear DNA. Class III members include nucleolar and mitochondrial transcription factors, UBF and mtTF1, which bind four-way DNA junctions.
Probab=36.87 E-value=78 Score=24.68 Aligned_cols=35 Identities=11% Similarity=0.129 Sum_probs=27.0
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHH
Q 005074 298 VAARESSRRLQALQSQDRRKILLDVADALEANESL 332 (715)
Q Consensus 298 ~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 332 (715)
+.++..-..|+.+|.++|..+..+.....++..++
T Consensus 30 ~i~~~~~~~W~~ls~~eK~~y~~~a~~~~~~y~~e 64 (66)
T cd01390 30 EVTKILGEKWKELSEEEKKKYEEKAEKDKERYEKE 64 (66)
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHh
Confidence 44566677899999999999988887766665544
No 240
>PF09011 HMG_box_2: HMG-box domain; InterPro: IPR015101 This domain is predominantly found in Maelstrom homologue proteins. It has no known function. ; GO: 0005634 nucleus; PDB: 2EQZ_A 1V64_A 2CTO_A 1H5P_A 3TQ6_A 3FGH_A 3TMM_A 1J3X_A 2YRQ_A 1AAB_A ....
Probab=34.55 E-value=1e+02 Score=25.07 Aligned_cols=34 Identities=18% Similarity=0.207 Sum_probs=24.5
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHH
Q 005074 298 VAARESSRRLQALQSQDRRKILLDVADALEANES 331 (715)
Q Consensus 298 ~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 331 (715)
+..+.+-..|+.+|.++|..+-.+....=++...
T Consensus 34 e~~k~~~~~Wk~Ls~~EK~~Y~~~A~~~k~~y~~ 67 (73)
T PF09011_consen 34 EVMKEISERWKSLSEEEKEPYEERAKEDKERYER 67 (73)
T ss_dssp HHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH
Confidence 4556677889999999999998877665444333
No 241
>PF06945 DUF1289: Protein of unknown function (DUF1289); InterPro: IPR010710 This family consists of a number of hypothetical bacterial proteins. The aligned region spans around 56 residues and contains 4 highly conserved cysteine residues towards the N terminus. The function of this family is unknown.
Probab=33.99 E-value=45 Score=25.37 Aligned_cols=21 Identities=19% Similarity=0.355 Sum_probs=18.4
Q ss_pred HHhcCCHHHHHHHHHHHHHHH
Q 005074 306 RLQALQSQDRRKILLDVADAL 326 (715)
Q Consensus 306 ~w~~~~~~~R~~~L~~~a~~l 326 (715)
.|..++.++|.+++.++....
T Consensus 29 ~W~~~s~~er~~i~~~l~~R~ 49 (51)
T PF06945_consen 29 DWKSMSDDERRAILARLRARR 49 (51)
T ss_pred HHhhCCHHHHHHHHHHHHHHh
Confidence 599999999999999887654
No 242
>PTZ00174 phosphomannomutase; Provisional
Probab=31.39 E-value=92 Score=31.90 Aligned_cols=43 Identities=21% Similarity=0.363 Sum_probs=33.5
Q ss_pred cceEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCC
Q 005074 14 VKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSG 61 (715)
Q Consensus 14 ~k~~VIKiGGs~l~~~~~~~~~~~l~~l~~~I~~l~~~G~~vviVhGg 61 (715)
.|+++.=+.|+++.++. .++. ...+.|+.+++.|++++|..|-
T Consensus 5 ~klia~DlDGTLL~~~~-~is~----~~~~ai~~l~~~Gi~~viaTGR 47 (247)
T PTZ00174 5 KTILLFDVDGTLTKPRN-PITQ----EMKDTLAKLKSKGFKIGVVGGS 47 (247)
T ss_pred CeEEEEECcCCCcCCCC-CCCH----HHHHHHHHHHHCCCEEEEEcCC
Confidence 67889999999998654 4542 3467788899999999988863
No 243
>PF00505 HMG_box: HMG (high mobility group) box; InterPro: IPR000910 High mobility group (HMG or HMGB) proteins are a family of relatively low molecular weight non-histone components in chromatin. HMG1 (also called HMG-T in fish) and HMG2 are two highly related proteins that bind single-stranded DNA preferentially and unwind double-stranded DNA. Although they have no sequence specificity, they have a high affinity for bent or distorted DNA, and bend linear DNA. HMG1 and HMG2 contain two DNA-binding HMG-box domains (A and B) that show structural and functional differences, and have a long acidic C-terminal domain rich in aspartic and glutamic acid residues. The acidic tail modulates the affinity of the tandem HMG boxes in HMG1 and 2 for a variety of DNA targets. HMG1 and 2 appear to play important architectural roles in the assembly of nucleoprotein complexes in a variety of biological processes, for example V(D)J recombination, the initiation of transcription, and DNA repair []. The profile in this entry describing the HMG-domains is much more general than the signature. In addition to the HMG1 and HMG2 proteins, HMG-domains occur in single or multiple copies in the following protein classes; the SOX family of transcription factors; SRY sex determining region Y protein and related proteins []; LEF1 lymphoid enhancer binding factor 1 []; SSRP recombination signal recognition protein; MTF1 mitochondrial transcription factor 1; UBF1/2 nucleolar transcription factors; Abf2 yeast ARS-binding factor []; and Saccharomyces cerevisiae transcription factors Ixr1, Rox1, Nhp6a, Nhp6b and Spp41.; GO: 0003677 DNA binding; PDB: 1I11_A 1J3C_A 1J3D_A 1WZ6_A 1WGF_A 2D7L_A 1GT0_D 3U2B_C 2CRJ_A 2CS1_A ....
Probab=31.33 E-value=1e+02 Score=24.31 Aligned_cols=35 Identities=9% Similarity=0.123 Sum_probs=27.3
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHH
Q 005074 299 AARESSRRLQALQSQDRRKILLDVADALEANESLI 333 (715)
Q Consensus 299 ~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l 333 (715)
..+.+-..|+.+|.++|..+-.......+++..++
T Consensus 31 i~~~~~~~W~~l~~~eK~~y~~~a~~~~~~y~~~~ 65 (69)
T PF00505_consen 31 ISKILAQMWKNLSEEEKAPYKEEAEEEKERYEKEM 65 (69)
T ss_dssp HHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chhhHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 45666678999999999999888877777665554
No 244
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=31.18 E-value=84 Score=32.43 Aligned_cols=43 Identities=9% Similarity=0.332 Sum_probs=33.3
Q ss_pred cceEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCC
Q 005074 14 VKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSG 61 (715)
Q Consensus 14 ~k~~VIKiGGs~l~~~~~~~~~~~l~~l~~~I~~l~~~G~~vviVhGg 61 (715)
.|+++.-+.|+++.+.. +++ ....+.|.++++.|++++|..|=
T Consensus 3 ~kli~~DlDGTLl~~~~-~i~----~~~~~ai~~l~~~G~~~~iaTGR 45 (270)
T PRK10513 3 IKLIAIDMDGTLLLPDH-TIS----PAVKQAIAAARAKGVNVVLTTGR 45 (270)
T ss_pred eEEEEEecCCcCcCCCC-ccC----HHHHHHHHHHHHCCCEEEEecCC
Confidence 57899999999997643 454 24467788899999999888753
No 245
>smart00398 HMG high mobility group.
Probab=30.03 E-value=1.3e+02 Score=23.49 Aligned_cols=35 Identities=11% Similarity=0.141 Sum_probs=26.9
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHH
Q 005074 299 AARESSRRLQALQSQDRRKILLDVADALEANESLI 333 (715)
Q Consensus 299 ~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l 333 (715)
.++..-..|+.+|.++|..+........+++..++
T Consensus 32 i~~~~~~~W~~l~~~ek~~y~~~a~~~~~~y~~~~ 66 (70)
T smart00398 32 ISKKLGERWKLLSEEEKAPYEEKAKKDKERYEEEM 66 (70)
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 34556678999999999999888877766665544
No 246
>PF03437 BtpA: BtpA family; InterPro: IPR005137 Photosystem I (PSI) is a large protein complex embedded within the photosynthetic thylakoid membrane. It consists of 11 subunits, ~100 chlorophyll a molecules, 2 phylloquinones, and 3 Fe4S4-clusters. The three dimensional structure of the PSI complex has been resolved at 2.5 A [], which allows the precise localisation of each cofactor. PSI together with photosystem II (PSII) catalyses the light-induced steps in oxygenic photosynthesis - a process found in cyanobacteria, eukaryotic algae (e.g. red algae, green algae) and higher plants. To date, three thylakoid proteins involved in the stable accumulation of PSI have been identified: BtpA [], Ycf3 [, ], and Ycf4 (IPR003359 from INTERPRO) []. Because translation of the psaA and psaB mRNAs encoding the two reaction centre polypeptides, of PSI and PSII respectively, is not affected in mutant strains lacking functional ycf3 and ycf4, the products of these two genes appear to act at a post-translational step of PSI biosynthesis. These gene products are therefore involved either in the stabilisation or in the assembly of the PSI complex. However, their exact roles remain unknown. The BtpA protein appears to act at the level of PSI stabilisation []. It is an extrinsic membrane protein located on the cytoplasmic side of the thylakoid membrane [, ]. Homologs of BtpA are found in the crenarchaeota and euryarchaeota, where their function remains unknown. The Ycf4 protein is firmly associated with the thylakoid membrane, presumably through a transmembrane domain []. Ycf4 co-fractionates with a protein complex larger than PSI upon sucrose density gradient centrifugation of solubilised thylakoids []. The Ycf3 protein is loosely associated with the thylakoid membrane and can be released from the membrane with sodium carbonate. This suggests that Ycf3 is not part of a stable complex and that it probably interacts transiently with its partners []. Ycf3 contains a number of tetratrico peptide repeats (TPR, IPR001440 from INTERPRO); TPR is a structural motif present in a wide range of proteins, which mediates protein-protein interactions.
Probab=29.05 E-value=1.3e+02 Score=31.16 Aligned_cols=115 Identities=23% Similarity=0.311 Sum_probs=62.8
Q ss_pred ecchhHHHH-HHhhcCCCEEEEeccCCccccCCCCCcCccccceeeccchhh-HHhc-CCCCCcccCC------hHHHHH
Q 005074 174 WDNDSLAGL-LALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQA-EITF-GDKSRVGRGG------MTAKVN 244 (715)
Q Consensus 174 ~~~D~~A~~-lA~~L~A~~li~lTDVdGV~~~dP~~p~a~~i~~is~~e~~~-~~~~-g~~~~~~~gg------M~~Kl~ 244 (715)
++++..... .=.+|+++ +-+++||.-=... | +..-+.+|..+ .++. ....-.+||. =..|++
T Consensus 123 ~~~~a~e~~r~R~~l~a~-v~ilaDV~~kh~~-~-------l~~~~~~~~~~~a~~~~~aDaviVtG~~TG~~~~~~~l~ 193 (254)
T PF03437_consen 123 IEGCAGELLRYRKRLGAD-VKILADVHVKHSS-P-------LATRDLEEAAKDAVERGGADAVIVTGKATGEPPDPEKLK 193 (254)
T ss_pred ccccHHHHHHHHHHcCCC-eEEEeeechhhcc-c-------CCCCCHHHHHHHHHHhcCCCEEEECCcccCCCCCHHHHH
Confidence 444443332 33578999 8999999753332 2 12222233221 1111 1111122222 234555
Q ss_pred HHHHHHHcCCcEEEEeCCCcchHHHH---HcCCcceeEEecCCcccc---cHhhHHHHHHHH
Q 005074 245 AAYCAACAGIPVVITSGFAMDSIIKV---LEGKRVGTLFHRDAHLWV---KQVGAREMAVAA 300 (715)
Q Consensus 245 aa~~a~~~gv~v~I~~g~~~~~l~~~---~tg~~iGT~i~~~~~~~~---~~~~v~~av~~A 300 (715)
.++.++. +||.|-+|-.++++.+. .+|-.+||++..+.. |. .++-|++-++++
T Consensus 194 ~vr~~~~--~PVlvGSGvt~~Ni~~~l~~ADG~IVGS~~K~~G~-~~n~VD~~Rv~~fm~~v 252 (254)
T PF03437_consen 194 RVREAVP--VPVLVGSGVTPENIAEYLSYADGAIVGSYFKKDGK-WENPVDPERVRRFMEAV 252 (254)
T ss_pred HHHhcCC--CCEEEecCCCHHHHHHHHHhCCEEEEeeeeeeCCE-eCCcCCHHHHHHHHHHh
Confidence 5555554 89999999999999665 467788999886533 32 234444444443
No 247
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=28.65 E-value=1e+02 Score=30.75 Aligned_cols=43 Identities=16% Similarity=0.431 Sum_probs=32.7
Q ss_pred cceEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCC
Q 005074 14 VKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSG 61 (715)
Q Consensus 14 ~k~~VIKiGGs~l~~~~~~~~~~~l~~l~~~I~~l~~~G~~vviVhGg 61 (715)
.|.++.=+.|+++.+.. .++ ....+.|..+++.|++++++.|=
T Consensus 3 ~kli~~DlDGTLl~~~~-~i~----~~~~~al~~l~~~G~~~~iaTGR 45 (230)
T PRK01158 3 IKAIAIDIDGTITDKDR-RLS----LKAVEAIRKAEKLGIPVILATGN 45 (230)
T ss_pred eeEEEEecCCCcCCCCC-ccC----HHHHHHHHHHHHCCCEEEEEcCC
Confidence 57888899999997543 343 34567788888999999888853
No 248
>PRK09875 putative hydrolase; Provisional
Probab=28.08 E-value=4.1e+02 Score=28.17 Aligned_cols=72 Identities=17% Similarity=0.320 Sum_probs=44.0
Q ss_pred HHhhcCCCCcceEEecccccCchhHHhHHHHHHHHHHhCCCeEEEeCCCceeccCCCCCCCCceeecchhHHHHHHhhc-
Q 005074 109 TLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSLAGLLALEL- 187 (715)
Q Consensus 109 ~~l~~~g~~~~~~~~~~~d~~~~~~~~~~~~~i~~ll~~g~iPVv~g~d~v~~~~~~~~~~~~~~~~~D~~A~~lA~~L- 187 (715)
..|.+.|+++.++++++.|.. .+.+.+.++++.|...=+. .+.. + .+...+..+..+...+
T Consensus 170 ~il~e~Gvd~~rvvi~H~d~~------~d~~~~~~l~~~G~~l~fD---~~g~--------~-~~~pd~~r~~~i~~L~~ 231 (292)
T PRK09875 170 ALLQAHGVDLSRVTVGHCDLK------DNLDNILKMIDLGAYVQFD---TIGK--------N-SYYPDEKRIAMLHALRD 231 (292)
T ss_pred HHHHHcCcCcceEEEeCCCCC------CCHHHHHHHHHcCCEEEec---cCCC--------c-ccCCHHHHHHHHHHHHh
Confidence 455677888899988865521 2356778899999776662 1211 0 1111123344444442
Q ss_pred -C-CCEEEEeccC
Q 005074 188 -K-ADLLVLLSDV 198 (715)
Q Consensus 188 -~-A~~li~lTDV 198 (715)
+ +|++++.+|.
T Consensus 232 ~Gy~drilLS~D~ 244 (292)
T PRK09875 232 RGLLNRVMLSMDI 244 (292)
T ss_pred cCCCCeEEEeCCC
Confidence 5 8999999998
No 249
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=27.77 E-value=1.1e+02 Score=31.68 Aligned_cols=42 Identities=10% Similarity=0.226 Sum_probs=32.9
Q ss_pred cceEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeC
Q 005074 14 VKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSS 60 (715)
Q Consensus 14 ~k~~VIKiGGs~l~~~~~~~~~~~l~~l~~~I~~l~~~G~~vviVhG 60 (715)
.|.++.=+.|+++.+.. .++ .+..+.|+.+++.|+++++..|
T Consensus 2 ~kli~~DlDGTLl~~~~-~i~----~~~~~ai~~l~~~G~~~~iaTG 43 (272)
T PRK15126 2 ARLAAFDMDGTLLMPDH-HLG----EKTLSTLARLRERDITLTFATG 43 (272)
T ss_pred ccEEEEeCCCcCcCCCC-cCC----HHHHHHHHHHHHCCCEEEEECC
Confidence 57899999999997543 454 3446778889999999988875
No 250
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=27.35 E-value=1.1e+02 Score=31.35 Aligned_cols=42 Identities=17% Similarity=0.379 Sum_probs=32.8
Q ss_pred cceEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeC
Q 005074 14 VKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSS 60 (715)
Q Consensus 14 ~k~~VIKiGGs~l~~~~~~~~~~~l~~l~~~I~~l~~~G~~vviVhG 60 (715)
.|+++.=+.|+++.++. .+.. +..+.|..+++.|++++|..|
T Consensus 3 ~kli~~DlDGTLl~~~~-~i~~----~~~~ai~~~~~~G~~~~iaTG 44 (272)
T PRK10530 3 YRVIALDLDGTLLTPKK-TILP----ESLEALARAREAGYKVIIVTG 44 (272)
T ss_pred ccEEEEeCCCceECCCC-ccCH----HHHHHHHHHHHCCCEEEEEcC
Confidence 57899999999997643 3442 346778899999999988875
No 251
>PRK10976 putative hydrolase; Provisional
Probab=26.90 E-value=1.1e+02 Score=31.36 Aligned_cols=43 Identities=14% Similarity=0.268 Sum_probs=33.4
Q ss_pred cceEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeCC
Q 005074 14 VKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSG 61 (715)
Q Consensus 14 ~k~~VIKiGGs~l~~~~~~~~~~~l~~l~~~I~~l~~~G~~vviVhGg 61 (715)
.|+++.=+.|+++.+.. .++ ....+.|..+++.|++++|..|=
T Consensus 2 ikli~~DlDGTLl~~~~-~is----~~~~~ai~~l~~~G~~~~iaTGR 44 (266)
T PRK10976 2 YQVVASDLDGTLLSPDH-TLS----PYAKETLKLLTARGIHFVFATGR 44 (266)
T ss_pred ceEEEEeCCCCCcCCCC-cCC----HHHHHHHHHHHHCCCEEEEEcCC
Confidence 47889999999997643 454 34467788899999999998853
No 252
>cd01388 SOX-TCF_HMG-box SOX-TCF_HMG-box, class I member of the HMG-box superfamily of DNA-binding proteins. These proteins contain a single HMG box, and bind the minor groove of DNA in a highly sequence-specific manner. Members include SRY and its homologs in insects and vertebrates, and transcription factor-like proteins, TCF-1, -3, -4, and LEF-1. They appear to bind the minor groove of the A/T C A A A G/C-motif.
Probab=26.74 E-value=1.4e+02 Score=24.06 Aligned_cols=34 Identities=12% Similarity=0.171 Sum_probs=25.8
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHH
Q 005074 298 VAARESSRRLQALQSQDRRKILLDVADALEANES 331 (715)
Q Consensus 298 ~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 331 (715)
+.++..-..|+.+|.++|..+........+++.+
T Consensus 31 eisk~l~~~Wk~ls~~eK~~y~~~a~~~k~~y~~ 64 (72)
T cd01388 31 AISKILGDRWKALSNEEKQPYYEEAKKLKELHMK 64 (72)
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHH
Confidence 3466667789999999999888777666665543
No 253
>PLN02887 hydrolase family protein
Probab=23.22 E-value=1.5e+02 Score=34.84 Aligned_cols=49 Identities=12% Similarity=0.289 Sum_probs=36.9
Q ss_pred hhhhhcccceEEEEeCCcccccCCCcccHHHHHHHHHHHHHHHHCCCeEEEEeC
Q 005074 7 SRAFVKDVKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSS 60 (715)
Q Consensus 7 ~~~~~~~~k~~VIKiGGs~l~~~~~~~~~~~l~~l~~~I~~l~~~G~~vviVhG 60 (715)
.|.+-.+.|.++.=+.|+++.+.. .++ ....+.|..+++.|++++|..|
T Consensus 301 ~~~~~~~iKLIa~DLDGTLLn~d~-~Is----~~t~eAI~kl~ekGi~~vIATG 349 (580)
T PLN02887 301 LRFYKPKFSYIFCDMDGTLLNSKS-QIS----ETNAKALKEALSRGVKVVIATG 349 (580)
T ss_pred hhhhccCccEEEEeCCCCCCCCCC-ccC----HHHHHHHHHHHHCCCeEEEEcC
Confidence 344444578899999999998643 454 3446789999999999988885
No 254
>cd00084 HMG-box High Mobility Group (HMG)-box is found in a variety of eukaryotic chromosomal proteins and transcription factors. HMGs bind to the minor groove of DNA and have been classified by DNA binding preferences. Two phylogenically distinct groups of Class I proteins bind DNA in a sequence specific fashion and contain a single HMG box. One group (SOX-TCF) includes transcription factors, TCF-1, -3, -4; and also SRY and LEF-1, which bind four-way DNA junctions and duplex DNA targets. The second group (MATA) includes fungal mating type gene products MC, MATA1 and Ste11. Class II and III proteins (HMGB-UBF) bind DNA in a non-sequence specific fashion and contain two or more tandem HMG boxes. Class II members include non-histone chromosomal proteins, HMG1 and HMG2, which bind to bent or distorted DNA such as four-way DNA junctions, synthetic DNA cruciforms, kinked cisplatin-modified DNA, DNA bulges, cross-overs in supercoiled DNA, and can cause looping of linear DNA. Class III member
Probab=22.45 E-value=2.2e+02 Score=21.79 Aligned_cols=33 Identities=12% Similarity=0.126 Sum_probs=25.2
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCH
Q 005074 298 VAARESSRRLQALQSQDRRKILLDVADALEANE 330 (715)
Q Consensus 298 ~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~ 330 (715)
+..+.....|+.++.++|..+.........++.
T Consensus 30 ~i~~~~~~~W~~l~~~~k~~y~~~a~~~~~~y~ 62 (66)
T cd00084 30 EISKILGEMWKSLSEEEKKKYEEKAEKDKERYE 62 (66)
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 345666778999999999999887776665554
No 255
>COG4430 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=20.84 E-value=1.8e+02 Score=28.57 Aligned_cols=99 Identities=20% Similarity=0.146 Sum_probs=58.3
Q ss_pred EEEeccCCccccCC-CCCcCccccceeeccchhhHHhcCCCCCcccCChHHH-HHHHHHHHHcCCcEEEEeCCCcchHHH
Q 005074 192 LVLLSDVEGLYSGP-PSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAK-VNAAYCAACAGIPVVITSGFAMDSIIK 269 (715)
Q Consensus 192 li~lTDVdGV~~~d-P~~p~a~~i~~is~~e~~~~~~~g~~~~~~~ggM~~K-l~aa~~a~~~gv~v~I~~g~~~~~l~~ 269 (715)
-.++.|-+|++... |+.+.++ .|+...+.++.+. |-|++. +..+..+...|..|-. . .
T Consensus 73 ~~ll~D~~~~L~~~Tpr~q~sr---qirf~nv~El~e~--------~~mi~ayL~e~~~a~~aG~~~~~-~--~------ 132 (200)
T COG4430 73 GALLLDEDGYLQQQTPRVQASR---QIRFTNVQELSEE--------GRMIKAYLAEAIAAEKAGRWVAL-K--K------ 132 (200)
T ss_pred cccccCccchhhhcCCCcccce---eeehhhHHHHHHh--------HHHHHHHHHHHHHHHhcCCccCC-C--c------
Confidence 35788999998654 4454444 6666666665553 334433 4455555556655511 1 0
Q ss_pred HHcCCcceeEEecCCcccccHhhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 005074 270 VLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVAD 324 (715)
Q Consensus 270 ~~tg~~iGT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~ 324 (715)
.-.. .- ++|+..++++--.+-..+..+++..|..+|.++++
T Consensus 133 ------~~e~--~I------PeeLq~alda~palk~~f~~Ltpgrq~ayl~~~~~ 173 (200)
T COG4430 133 ------NEEL--II------PEELQDALDANPALKTAFEALTPGRQRAYLFRISQ 173 (200)
T ss_pred ------cccc--CC------cHHHHHHHhcCHHHHHHHHhcCCcchHHHHHHHhc
Confidence 0111 11 56777777655555555666888888888887765
No 256
>TIGR00620 sporelyase spore photoproduct lyase. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=20.83 E-value=1.4e+02 Score=29.69 Aligned_cols=60 Identities=20% Similarity=0.192 Sum_probs=42.9
Q ss_pred EEEEe---ccCCccccCCCCCcCccccce--eeccchhhHHhcCCCCCcccCChHHHHHHHHHHHHcCCcEEEE
Q 005074 191 LLVLL---SDVEGLYSGPPSEPNSKLIHT--YIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVIT 259 (715)
Q Consensus 191 ~li~l---TDVdGV~~~dP~~p~a~~i~~--is~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a~~~gv~v~I~ 259 (715)
++-|. +||+++.+-+| +++.+-+ |+++++.+..+ ..|..+..-|+||..+++.|-+|.++
T Consensus 26 ~lef~TK~~nv~~Ll~l~~---~~~t~~rfSlnp~~Ii~~~E------~~T~sl~~Rl~Aa~k~a~aGy~Vg~~ 90 (199)
T TIGR00620 26 KLRFVTKFHHVDHLLDAKH---NGKTRFRFSINADYVIKNFE------PGTSPLDKRIEAAVKVAKAGYPLGFI 90 (199)
T ss_pred EEEEEEcccchhhHhcCCC---CCCEEEEEEeCHHHHHHHhc------CCCCCHHHHHHHHHHHHHcCCeEEEE
Confidence 35555 68888888765 3334433 66777766555 34777888999999999999997765
No 257
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=20.00 E-value=2.8e+02 Score=29.46 Aligned_cols=51 Identities=20% Similarity=0.293 Sum_probs=37.8
Q ss_pred ccceEEEEeCCcccccCCC-cccHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhh
Q 005074 13 DVKRLVVKVGTAVVTRSDG-RLALGRLGALLEQLKELNSQGFEIILVSSGAVGVG 66 (715)
Q Consensus 13 ~~k~~VIKiGGs~l~~~~~-~~~~~~l~~l~~~I~~l~~~G~~vviVhGgg~~i~ 66 (715)
..+.+|.=+.|+++++... +++. ..+.+.+..|++.|.+++|+.+++...-
T Consensus 125 ~~kvIvFDLDgTLi~~~~~v~ird---PgV~EaL~~LkekGikLaIaTS~~Re~v 176 (301)
T TIGR01684 125 PPHVVVFDLDSTLITDEEPVRIRD---PRIYDSLTELKKRGCILVLWSYGDRDHV 176 (301)
T ss_pred cceEEEEecCCCCcCCCCccccCC---HHHHHHHHHHHHCCCEEEEEECCCHHHH
Confidence 3678999999999998652 2321 4566778888899999999998755433
Done!